Query psy8850
Match_columns 397
No_of_seqs 130 out of 1966
Neff 10.3
Searched_HMMs 46136
Date Fri Aug 16 20:50:36 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8850.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/8850hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1104 NifS Cysteine sulfinat 100.0 8.9E-62 1.9E-66 431.6 41.8 377 1-380 5-385 (386)
2 TIGR02006 IscS cysteine desulf 100.0 1.5E-53 3.2E-58 402.2 44.6 396 1-397 7-402 (402)
3 PRK14012 cysteine desulfurase; 100.0 1.1E-51 2.5E-56 389.8 44.5 396 1-397 7-404 (404)
4 COG0520 csdA Selenocysteine ly 100.0 4.6E-51 1E-55 377.9 40.0 358 1-371 26-404 (405)
5 KOG1549|consensus 100.0 8.3E-52 1.8E-56 368.7 32.3 380 1-382 47-428 (428)
6 PLN02651 cysteine desulfurase 100.0 2.7E-49 5.8E-54 368.7 40.9 360 1-360 3-364 (364)
7 TIGR03402 FeS_nifS cysteine de 100.0 1.1E-48 2.3E-53 367.3 44.4 372 1-376 3-376 (379)
8 TIGR03403 nifS_epsilon cystein 100.0 2.4E-47 5.2E-52 358.3 43.7 372 1-376 3-379 (382)
9 PRK09295 bifunctional cysteine 100.0 1.5E-46 3.3E-51 355.4 39.4 357 1-371 27-403 (406)
10 PRK02948 cysteine desulfurase; 100.0 7.7E-46 1.7E-50 348.1 43.5 369 1-373 4-375 (381)
11 PRK10874 cysteine sulfinate de 100.0 5.5E-46 1.2E-50 351.4 40.3 358 1-373 23-399 (401)
12 PLN02855 Bifunctional selenocy 100.0 7.9E-46 1.7E-50 352.2 41.0 363 1-375 36-421 (424)
13 TIGR03392 FeS_syn_CsdA cystein 100.0 4.7E-46 1E-50 351.5 39.1 358 1-373 20-396 (398)
14 TIGR01979 sufS cysteine desulf 100.0 3.3E-44 7.2E-49 339.7 40.5 361 1-373 22-402 (403)
15 TIGR03235 DNA_S_dndA cysteine 100.0 4.6E-44 9.9E-49 332.7 39.0 348 1-350 2-353 (353)
16 PF00266 Aminotran_5: Aminotra 100.0 1.3E-44 2.9E-49 338.4 34.7 349 1-362 3-371 (371)
17 cd06453 SufS_like Cysteine des 100.0 1.9E-42 4.1E-47 324.6 39.2 352 1-366 3-373 (373)
18 TIGR01977 am_tr_V_EF2568 cyste 100.0 3.8E-40 8.3E-45 309.4 41.4 352 1-368 3-375 (376)
19 TIGR01976 am_tr_V_VC1184 cyste 100.0 6.4E-40 1.4E-44 310.0 38.0 354 1-366 21-397 (397)
20 PLN02724 Molybdenum cofactor s 100.0 4.2E-39 9.1E-44 325.0 34.9 363 1-373 38-489 (805)
21 TIGR01814 kynureninase kynuren 100.0 1.9E-37 4.2E-42 292.9 34.0 337 1-370 31-405 (406)
22 PLN02409 serine--glyoxylate am 100.0 5.9E-36 1.3E-40 281.6 33.3 339 1-375 12-375 (401)
23 cd06451 AGAT_like Alanine-glyo 100.0 1.1E-35 2.5E-40 276.9 32.8 333 2-370 3-355 (356)
24 TIGR02326 transamin_PhnW 2-ami 100.0 8.2E-35 1.8E-39 271.6 33.3 330 7-371 8-361 (363)
25 TIGR01788 Glu-decarb-GAD gluta 100.0 7.2E-33 1.6E-37 259.2 36.9 345 1-373 37-430 (431)
26 PRK13479 2-aminoethylphosphona 100.0 2.3E-33 4.9E-38 262.5 33.2 308 39-373 35-364 (368)
27 COG0075 Serine-pyruvate aminot 100.0 4.6E-33 9.9E-38 250.3 32.8 336 4-375 11-366 (383)
28 PRK02769 histidine decarboxyla 100.0 1.1E-32 2.3E-37 254.8 35.7 321 10-372 35-372 (380)
29 PTZ00094 serine hydroxymethylt 100.0 1.9E-33 4.1E-38 268.1 31.3 353 4-383 41-419 (452)
30 COG0436 Aspartate/tyrosine/aro 100.0 1.1E-33 2.4E-38 262.8 28.8 326 8-373 41-392 (393)
31 TIGR03301 PhnW-AepZ 2-aminoeth 100.0 8.4E-33 1.8E-37 257.8 33.4 326 4-369 5-354 (355)
32 cd00611 PSAT_like Phosphoserin 100.0 3.7E-34 8.1E-39 265.0 24.1 332 3-369 4-353 (355)
33 PRK09331 Sep-tRNA:Cys-tRNA syn 100.0 1.6E-32 3.4E-37 257.5 34.9 331 6-372 29-381 (387)
34 PRK03080 phosphoserine aminotr 100.0 3.1E-33 6.7E-38 260.9 28.8 328 5-375 19-376 (378)
35 PLN03032 serine decarboxylase; 100.0 2.1E-32 4.6E-37 250.7 32.2 315 10-368 36-372 (374)
36 TIGR01364 serC_1 phosphoserine 100.0 1.2E-32 2.5E-37 252.9 28.8 327 8-372 2-348 (349)
37 PRK13520 L-tyrosine decarboxyl 100.0 6.1E-32 1.3E-36 253.4 33.7 328 5-371 28-370 (371)
38 PRK06225 aspartate aminotransf 100.0 6.7E-32 1.4E-36 253.4 30.2 326 6-375 39-379 (380)
39 PRK05355 3-phosphoserine/phosp 100.0 5.9E-32 1.3E-36 249.6 28.8 334 2-372 7-358 (360)
40 cd06452 SepCysS Sep-tRNA:Cys-t 100.0 3.7E-31 8.1E-36 246.6 33.6 329 6-370 10-360 (361)
41 COG1168 MalY Bifunctional PLP- 100.0 2.7E-31 5.8E-36 232.1 29.9 324 7-372 37-386 (388)
42 PRK06207 aspartate aminotransf 100.0 2.3E-31 4.9E-36 251.0 30.5 326 8-374 53-404 (405)
43 PRK05957 aspartate aminotransf 100.0 9.6E-31 2.1E-35 245.9 32.2 326 8-373 40-386 (389)
44 PRK06108 aspartate aminotransf 100.0 8.4E-31 1.8E-35 246.5 30.9 322 8-371 37-381 (382)
45 TIGR02539 SepCysS Sep-tRNA:Cys 100.0 6.4E-30 1.4E-34 238.6 35.1 329 6-372 17-368 (370)
46 PRK07324 transaminase; Validat 100.0 8E-31 1.7E-35 244.8 28.6 316 9-373 40-371 (373)
47 PLN00145 tyrosine/nicotianamin 100.0 2.4E-30 5.2E-35 245.2 31.8 327 7-376 68-428 (430)
48 PRK08960 hypothetical protein; 100.0 1E-30 2.2E-35 245.8 28.5 326 1-371 37-386 (387)
49 cd06450 DOPA_deC_like DOPA dec 100.0 1.1E-30 2.4E-35 242.4 27.9 282 32-368 29-344 (345)
50 TIGR03812 tyr_de_CO2_Arch tyro 100.0 9.5E-30 2.1E-34 238.7 33.8 322 8-368 31-372 (373)
51 PLN02187 rooty/superroot1 100.0 4.1E-30 8.9E-35 245.2 31.7 326 8-377 83-443 (462)
52 PRK07681 aspartate aminotransf 100.0 1.7E-30 3.7E-35 245.2 28.3 314 8-368 45-384 (399)
53 TIGR01141 hisC histidinol-phos 100.0 2.7E-30 5.8E-35 239.8 28.7 307 6-367 30-346 (346)
54 PRK08361 aspartate aminotransf 100.0 1.6E-30 3.4E-35 244.9 27.2 318 9-372 47-390 (391)
55 KOG0259|consensus 100.0 7E-30 1.5E-34 221.6 28.3 328 7-374 77-435 (447)
56 PTZ00377 alanine aminotransfer 100.0 8.6E-30 1.9E-34 245.2 32.0 333 2-376 82-479 (481)
57 PTZ00433 tyrosine aminotransfe 100.0 7.6E-30 1.6E-34 241.5 29.9 319 8-374 50-410 (412)
58 PLN00175 aminotransferase fami 100.0 1.5E-29 3.3E-34 238.9 31.5 324 8-371 67-412 (413)
59 PRK14807 histidinol-phosphate 100.0 1.6E-29 3.5E-34 234.4 31.1 308 8-370 35-350 (351)
60 PRK06348 aspartate aminotransf 100.0 1.2E-29 2.6E-34 238.2 30.0 290 43-369 68-382 (384)
61 PRK07682 hypothetical protein; 100.0 1.3E-29 2.9E-34 237.8 30.1 318 9-373 34-377 (378)
62 TIGR01822 2am3keto_CoA 2-amino 100.0 2.1E-29 4.5E-34 238.0 31.3 318 9-373 53-390 (393)
63 PRK03158 histidinol-phosphate 100.0 1.2E-29 2.6E-34 236.5 29.3 304 8-369 42-358 (359)
64 TIGR03540 DapC_direct LL-diami 100.0 9.7E-30 2.1E-34 239.1 28.8 315 8-368 42-382 (383)
65 PRK09105 putative aminotransfe 100.0 2.2E-29 4.8E-34 234.5 30.9 309 2-370 49-368 (370)
66 PRK05764 aspartate aminotransf 100.0 1.3E-29 2.8E-34 239.3 29.3 318 8-373 44-392 (393)
67 KOG0257|consensus 100.0 3.7E-30 8E-35 227.2 23.7 269 8-299 44-344 (420)
68 PRK07366 succinyldiaminopimela 100.0 7.9E-30 1.7E-34 240.0 27.4 316 8-369 43-387 (388)
69 TIGR01264 tyr_amTase_E tyrosin 100.0 1.7E-29 3.7E-34 238.6 29.4 322 7-372 47-399 (401)
70 PLN02656 tyrosine transaminase 100.0 1.7E-29 3.6E-34 238.8 29.3 321 7-374 47-405 (409)
71 PLN03026 histidinol-phosphate 100.0 3.3E-29 7.1E-34 234.4 31.0 305 8-369 65-379 (380)
72 PRK13355 bifunctional HTH-doma 100.0 1.1E-29 2.5E-34 246.3 28.6 322 8-374 162-516 (517)
73 cd00613 GDC-P Glycine cleavage 100.0 3.5E-29 7.6E-34 236.9 31.2 303 38-366 61-398 (398)
74 TIGR01437 selA_rel uncharacter 100.0 3.2E-29 7E-34 232.3 30.1 316 6-370 22-363 (363)
75 TIGR01366 serC_3 phosphoserine 100.0 1.8E-29 4E-34 233.5 28.4 330 4-373 9-361 (361)
76 PRK09276 LL-diaminopimelate am 100.0 1.8E-29 3.8E-34 237.5 28.7 315 8-368 44-384 (385)
77 PRK07179 hypothetical protein; 100.0 3.3E-29 7.1E-34 237.1 30.6 317 9-373 69-399 (407)
78 cd06454 KBL_like KBL_like; thi 100.0 2.3E-29 5.1E-34 234.0 29.1 316 10-369 17-348 (349)
79 TIGR01265 tyr_nico_aTase tyros 100.0 5E-29 1.1E-33 235.4 31.4 322 8-373 48-402 (403)
80 PRK01533 histidinol-phosphate 100.0 1.3E-29 2.8E-34 235.6 26.8 305 7-376 41-359 (366)
81 PRK04870 histidinol-phosphate 100.0 1.7E-29 3.8E-34 235.0 27.8 308 8-369 39-355 (356)
82 PRK05942 aspartate aminotransf 100.0 2.4E-29 5.2E-34 237.0 28.8 314 9-368 49-388 (394)
83 PLN00143 tyrosine/nicotianamin 100.0 3.5E-29 7.7E-34 236.4 29.5 325 7-375 48-407 (409)
84 PRK08363 alanine aminotransfer 100.0 3.2E-29 6.9E-34 236.6 29.1 322 8-372 46-394 (398)
85 PRK05387 histidinol-phosphate 100.0 4.7E-29 1E-33 232.1 29.6 308 8-371 37-352 (353)
86 PRK07568 aspartate aminotransf 100.0 6.2E-29 1.3E-33 235.0 30.2 328 2-374 36-394 (397)
87 PRK07309 aromatic amino acid a 100.0 1.2E-28 2.6E-33 231.9 31.5 318 9-373 44-389 (391)
88 PRK08068 transaminase; Reviewe 100.0 4E-29 8.7E-34 235.2 28.1 315 8-368 45-385 (389)
89 PRK08912 hypothetical protein; 100.0 1.2E-28 2.5E-33 232.0 31.1 319 9-372 40-386 (387)
90 PRK06107 aspartate aminotransf 100.0 9.5E-29 2.1E-33 233.4 30.5 321 9-373 47-401 (402)
91 PRK07337 aminotransferase; Val 100.0 5.6E-29 1.2E-33 234.2 28.6 318 8-370 43-387 (388)
92 PRK02731 histidinol-phosphate 100.0 1.1E-28 2.3E-33 230.8 29.9 306 9-371 46-365 (367)
93 PRK00950 histidinol-phosphate 100.0 6.8E-29 1.5E-33 231.7 28.4 306 8-370 47-360 (361)
94 TIGR03537 DapC succinyldiamino 100.0 1.2E-28 2.6E-33 228.6 29.7 312 8-368 13-349 (350)
95 PRK12414 putative aminotransfe 100.0 1.7E-28 3.8E-33 230.2 31.0 319 8-368 42-383 (384)
96 PRK09082 methionine aminotrans 100.0 8.3E-29 1.8E-33 232.7 28.7 320 8-368 43-385 (386)
97 PRK15481 transcriptional regul 100.0 8.2E-29 1.8E-33 236.0 28.5 291 42-371 122-430 (431)
98 PRK07550 hypothetical protein; 100.0 8.6E-29 1.9E-33 232.8 28.3 317 8-369 42-384 (386)
99 PRK07683 aminotransferase A; V 100.0 2.8E-28 6E-33 229.1 31.3 318 8-372 41-383 (387)
100 PRK08056 threonine-phosphate d 100.0 2.6E-28 5.6E-33 226.8 30.7 307 7-370 32-353 (356)
101 PRK08153 histidinol-phosphate 100.0 2.6E-28 5.5E-33 227.7 30.3 310 8-375 45-368 (369)
102 COG1167 ARO8 Transcriptional r 100.0 3.5E-28 7.6E-33 231.1 31.5 300 41-374 132-457 (459)
103 PRK09147 succinyldiaminopimela 100.0 2.2E-28 4.9E-33 230.7 30.0 322 8-370 42-394 (396)
104 PRK06290 aspartate aminotransf 100.0 2.1E-28 4.6E-33 230.5 29.2 315 9-373 58-406 (410)
105 PRK08636 aspartate aminotransf 100.0 2.8E-28 6.2E-33 230.3 29.7 319 9-373 47-401 (403)
106 PRK06855 aminotransferase; Val 100.0 2.4E-28 5.2E-33 232.2 29.2 327 8-373 48-430 (433)
107 PRK09148 aminotransferase; Val 100.0 2.3E-28 4.9E-33 230.8 28.8 322 8-376 43-394 (405)
108 PLN02414 glycine dehydrogenase 100.0 8.4E-28 1.8E-32 241.3 34.3 307 39-375 566-910 (993)
109 PRK06836 aspartate aminotransf 100.0 5E-28 1.1E-32 227.9 30.2 322 8-374 46-393 (394)
110 PRK07908 hypothetical protein; 100.0 5.8E-28 1.3E-32 224.1 29.9 303 8-371 35-346 (349)
111 PRK09265 aminotransferase AlaT 100.0 4.2E-28 9.1E-33 229.3 29.3 323 8-374 49-403 (404)
112 COG0079 HisC Histidinol-phosph 100.0 1.2E-27 2.7E-32 218.4 30.5 309 8-372 35-354 (356)
113 cd00378 SHMT Serine-glycine hy 100.0 4.8E-28 1E-32 229.3 28.9 336 3-372 25-385 (402)
114 PLN02376 1-aminocyclopropane-1 100.0 5.9E-28 1.3E-32 231.5 29.3 296 42-375 95-441 (496)
115 PRK02610 histidinol-phosphate 100.0 7.5E-28 1.6E-32 225.1 29.1 308 8-372 41-371 (374)
116 PLN02822 serine palmitoyltrans 100.0 1.6E-27 3.5E-32 227.8 32.0 324 9-373 124-478 (481)
117 PRK05937 8-amino-7-oxononanoat 100.0 8.2E-28 1.8E-32 224.4 29.1 320 2-376 16-354 (370)
118 KOG2862|consensus 100.0 3.2E-27 7E-32 199.8 29.5 333 5-373 24-383 (385)
119 TIGR03538 DapC_gpp succinyldia 100.0 3.9E-28 8.4E-33 228.8 26.8 317 8-369 41-392 (393)
120 PRK04366 glycine dehydrogenase 100.0 5.3E-27 1.1E-31 224.8 34.4 339 8-375 81-451 (481)
121 PRK07777 aminotransferase; Val 100.0 1.5E-27 3.2E-32 224.5 30.0 321 10-370 39-384 (387)
122 PLN02450 1-aminocyclopropane-1 100.0 2.4E-28 5.2E-33 233.4 24.5 314 42-395 87-456 (468)
123 PRK00451 glycine dehydrogenase 100.0 3E-27 6.6E-32 226.4 31.8 304 38-370 109-446 (447)
124 PRK03321 putative aminotransfe 100.0 8.4E-28 1.8E-32 223.5 27.2 303 8-371 35-350 (352)
125 PRK14809 histidinol-phosphate 100.0 2.2E-27 4.7E-32 220.9 29.9 303 7-371 42-356 (357)
126 PRK08133 O-succinylhomoserine 100.0 1E-27 2.2E-32 224.1 27.4 304 36-371 56-389 (390)
127 PRK07392 threonine-phosphate d 100.0 3.8E-27 8.2E-32 219.5 31.1 307 7-370 34-357 (360)
128 PRK05958 8-amino-7-oxononanoat 100.0 2.6E-27 5.5E-32 223.3 30.1 317 8-369 53-384 (385)
129 PRK08175 aminotransferase; Val 100.0 1.9E-27 4.1E-32 224.2 29.0 317 9-372 43-389 (395)
130 PRK05166 histidinol-phosphate 100.0 3.2E-27 6.9E-32 220.8 30.1 306 8-370 49-369 (371)
131 TIGR00858 bioF 8-amino-7-oxono 100.0 2.9E-27 6.4E-32 220.9 29.8 315 8-367 30-360 (360)
132 PLN02721 threonine aldolase 100.0 1.6E-27 3.6E-32 221.9 27.6 312 8-371 17-351 (353)
133 PLN02607 1-aminocyclopropane-1 100.0 7.3E-28 1.6E-32 228.4 25.4 302 41-380 95-445 (447)
134 PRK06358 threonine-phosphate d 100.0 5.6E-27 1.2E-31 217.5 30.8 305 8-370 32-353 (354)
135 PF00155 Aminotran_1_2: Aminot 100.0 6.3E-28 1.4E-32 225.5 24.4 286 40-366 43-363 (363)
136 PRK03317 histidinol-phosphate 100.0 4.9E-27 1.1E-31 219.5 29.6 308 7-371 38-363 (368)
137 PRK01688 histidinol-phosphate 100.0 6.4E-28 1.4E-32 223.5 23.3 281 43-367 59-351 (351)
138 PLN02231 alanine transaminase 100.0 1.1E-26 2.4E-31 223.9 32.5 327 9-376 141-531 (534)
139 cd00609 AAT_like Aspartate ami 100.0 3.7E-27 8E-32 219.3 27.6 289 42-367 37-349 (350)
140 PLN02483 serine palmitoyltrans 100.0 1.5E-26 3.1E-31 221.7 32.0 325 9-376 116-470 (489)
141 PRK06939 2-amino-3-ketobutyrat 100.0 6.3E-27 1.4E-31 221.5 29.2 319 9-373 57-394 (397)
142 PRK08134 O-acetylhomoserine am 100.0 1.7E-26 3.6E-31 217.3 31.6 319 33-376 56-431 (433)
143 PRK08861 cystathionine gamma-s 100.0 4.4E-27 9.5E-32 218.1 27.1 311 32-375 44-386 (388)
144 PRK00011 glyA serine hydroxyme 100.0 6.8E-27 1.5E-31 222.1 29.0 335 4-372 32-389 (416)
145 TIGR01821 5aminolev_synth 5-am 100.0 1.9E-26 4.1E-31 218.0 31.5 322 9-373 60-397 (402)
146 PRK04635 histidinol-phosphate 100.0 2.2E-27 4.7E-32 220.5 24.6 280 43-369 62-352 (354)
147 PLN02452 phosphoserine transam 100.0 1.1E-26 2.5E-31 213.1 28.6 333 3-372 12-363 (365)
148 PRK06767 methionine gamma-lyas 100.0 4.2E-27 9.1E-32 220.0 26.2 307 35-372 55-385 (386)
149 PLN02263 serine decarboxylase 100.0 9.3E-26 2E-30 209.6 34.3 293 38-373 130-444 (470)
150 PRK07590 L,L-diaminopimelate a 100.0 5.1E-27 1.1E-31 222.2 26.1 319 8-369 47-408 (409)
151 PRK04781 histidinol-phosphate 100.0 1.8E-26 3.9E-31 214.8 29.0 286 43-371 61-362 (364)
152 PRK13392 5-aminolevulinate syn 100.0 2.6E-26 5.7E-31 217.5 30.5 322 9-373 61-398 (410)
153 TIGR01329 cysta_beta_ly_E cyst 100.0 2.4E-27 5.3E-32 220.6 22.6 307 33-372 39-375 (378)
154 PRK06425 histidinol-phosphate 100.0 1.4E-26 3.1E-31 213.0 27.3 279 41-370 40-331 (332)
155 PLN02880 tyrosine decarboxylas 100.0 2.9E-26 6.4E-31 218.7 30.2 315 32-376 113-488 (490)
156 PRK09064 5-aminolevulinate syn 100.0 6.4E-26 1.4E-30 214.8 31.9 322 9-373 61-398 (407)
157 PRK03967 histidinol-phosphate 100.0 1.9E-26 4.2E-31 212.5 27.2 303 2-372 24-334 (337)
158 PRK08249 cystathionine gamma-s 100.0 3E-26 6.5E-31 214.1 28.4 311 32-374 55-395 (398)
159 PRK05839 hypothetical protein; 100.0 4.5E-26 9.8E-31 213.0 29.3 313 8-371 37-373 (374)
160 cd00614 CGS_like CGS_like: Cys 100.0 9.7E-27 2.1E-31 216.7 24.4 306 33-370 32-368 (369)
161 TIGR03542 DAPAT_plant LL-diami 100.0 2.2E-26 4.8E-31 217.3 27.0 320 8-369 46-401 (402)
162 TIGR01825 gly_Cac_T_rel pyrido 100.0 6.8E-26 1.5E-30 213.5 30.2 320 8-373 47-382 (385)
163 PLN02590 probable tyrosine dec 100.0 1.5E-25 3.3E-30 213.7 32.5 336 13-375 143-535 (539)
164 cd00616 AHBA_syn 3-amino-5-hyd 100.0 4.1E-26 8.9E-31 212.4 28.1 308 41-367 18-352 (352)
165 PRK09028 cystathionine beta-ly 100.0 2.8E-26 6.2E-31 212.4 26.5 308 36-375 56-390 (394)
166 PRK07504 O-succinylhomoserine 100.0 3.4E-26 7.4E-31 214.2 27.4 308 35-374 59-397 (398)
167 PLN02271 serine hydroxymethylt 100.0 1.3E-25 2.9E-30 209.6 30.9 342 4-372 155-540 (586)
168 PLN02672 methionine S-methyltr 100.0 1.4E-25 3E-30 225.9 33.2 315 7-372 709-1080(1082)
169 PRK06234 methionine gamma-lyas 100.0 3.9E-26 8.5E-31 214.1 27.3 309 35-373 58-398 (400)
170 PRK13393 5-aminolevulinate syn 100.0 1.8E-25 3.9E-30 211.4 32.0 321 9-373 60-397 (406)
171 PRK08114 cystathionine beta-ly 100.0 3.3E-26 7.1E-31 211.2 26.1 312 33-372 54-393 (395)
172 PRK13238 tnaA tryptophanase/L- 100.0 8.9E-26 1.9E-30 214.0 29.7 334 12-381 58-441 (460)
173 TIGR01324 cysta_beta_ly_B cyst 100.0 6.9E-26 1.5E-30 210.0 28.3 307 33-372 42-376 (377)
174 PRK08045 cystathionine gamma-s 100.0 5.6E-26 1.2E-30 211.5 27.5 310 33-374 44-384 (386)
175 TIGR01325 O_suc_HS_sulf O-succ 100.0 3.5E-26 7.5E-31 213.4 26.1 302 36-369 49-379 (380)
176 PRK05968 hypothetical protein; 100.0 3.4E-26 7.3E-31 213.7 25.9 309 33-373 55-387 (389)
177 PLN03226 serine hydroxymethylt 100.0 5.7E-25 1.2E-29 208.8 34.4 350 4-380 41-427 (475)
178 TIGR01328 met_gam_lyase methio 100.0 4.8E-26 1E-30 212.7 26.6 310 33-372 51-390 (391)
179 PRK08776 cystathionine gamma-s 100.0 1.6E-25 3.5E-30 209.5 30.1 311 33-375 52-393 (405)
180 PRK08064 cystathionine beta-ly 100.0 1.9E-26 4.2E-31 215.5 23.9 307 33-368 46-382 (390)
181 TIGR02080 O_succ_thio_ly O-suc 100.0 5.8E-26 1.3E-30 211.3 26.6 307 33-371 43-380 (382)
182 PRK14808 histidinol-phosphate 100.0 1.1E-25 2.5E-30 206.9 27.2 295 6-369 30-334 (335)
183 PRK13580 serine hydroxymethylt 100.0 9.8E-26 2.1E-30 209.9 26.8 338 4-373 56-446 (493)
184 PRK09440 avtA valine--pyruvate 99.9 9.5E-26 2.1E-30 214.3 27.3 309 42-375 75-414 (416)
185 TIGR01365 serC_2 phosphoserine 99.9 1.6E-25 3.4E-30 205.5 27.5 304 35-372 33-373 (374)
186 PRK08248 O-acetylhomoserine am 99.9 2.8E-25 6E-30 209.2 29.3 315 35-374 58-429 (431)
187 PRK09275 aspartate aminotransf 99.9 1.5E-25 3.2E-30 213.1 27.3 293 59-377 162-522 (527)
188 PLN02242 methionine gamma-lyas 99.9 1.4E-25 3E-30 210.6 26.8 312 33-374 68-417 (418)
189 PRK07503 methionine gamma-lyas 99.9 2.6E-25 5.7E-30 208.5 28.6 313 33-375 57-399 (403)
190 PRK07865 N-succinyldiaminopime 99.9 2.4E-25 5.2E-30 207.8 28.3 298 9-367 41-363 (364)
191 PLN03227 serine palmitoyltrans 99.9 1.1E-24 2.4E-29 203.9 32.4 338 2-373 2-383 (392)
192 PRK07811 cystathionine gamma-s 99.9 1.6E-25 3.4E-30 209.2 26.6 307 33-371 53-387 (388)
193 TIGR03799 NOD_PanD_pyr putativ 99.9 3.9E-25 8.5E-30 211.2 29.7 257 33-298 121-437 (522)
194 PRK08574 cystathionine gamma-s 99.9 8.8E-26 1.9E-30 210.3 24.6 307 33-372 45-384 (385)
195 cd06502 TA_like Low-specificit 99.9 3.3E-26 7.1E-31 211.9 21.6 308 8-368 9-337 (338)
196 PRK12462 phosphoserine aminotr 99.9 8.3E-25 1.8E-29 198.3 30.1 333 3-372 9-362 (364)
197 PRK07810 O-succinylhomoserine 99.9 1.6E-25 3.5E-30 209.6 26.3 303 36-370 65-402 (403)
198 COG0156 BioF 7-keto-8-aminopel 99.9 5.2E-25 1.1E-29 200.4 28.6 314 10-369 55-387 (388)
199 COG0076 GadB Glutamate decarbo 99.9 6.3E-25 1.4E-29 206.1 29.9 283 6-300 71-381 (460)
200 TIGR03801 asp_4_decarbox aspar 99.9 3.7E-25 8.1E-30 210.1 28.6 289 60-375 157-519 (521)
201 PRK06460 hypothetical protein; 99.9 2.6E-25 5.7E-30 206.8 27.0 309 32-372 36-374 (376)
202 PRK05613 O-acetylhomoserine am 99.9 6.4E-25 1.4E-29 206.4 29.4 316 33-372 61-436 (437)
203 TIGR03539 DapC_actino succinyl 99.9 3.2E-25 6.9E-30 206.2 27.2 302 8-366 34-356 (357)
204 PRK07812 O-acetylhomoserine am 99.9 9.7E-25 2.1E-29 205.1 30.2 317 35-375 63-434 (436)
205 TIGR01140 L_thr_O3P_dcar L-thr 99.9 2.2E-25 4.7E-30 205.0 25.2 271 43-367 49-330 (330)
206 PRK11658 UDP-4-amino-4-deoxy-L 99.9 6.2E-25 1.3E-29 205.2 28.4 330 10-370 13-377 (379)
207 PRK09257 aromatic amino acid a 99.9 2.4E-25 5.3E-30 209.9 25.6 309 11-369 47-395 (396)
208 PRK05939 hypothetical protein; 99.9 6.2E-25 1.4E-29 205.0 27.8 314 33-371 39-395 (397)
209 TIGR00461 gcvP glycine dehydro 99.9 6.3E-24 1.4E-28 210.9 34.9 309 39-375 528-870 (939)
210 COG0399 WecE Predicted pyridox 99.9 2.3E-24 5.1E-29 194.6 28.9 333 10-372 14-373 (374)
211 PRK06176 cystathionine gamma-s 99.9 1.7E-25 3.6E-30 208.0 21.8 308 32-372 41-378 (380)
212 COG4992 ArgD Ornithine/acetylo 99.9 2.1E-24 4.5E-29 192.6 27.6 323 6-376 56-402 (404)
213 PLN02509 cystathionine beta-ly 99.9 1.7E-24 3.7E-29 204.0 28.2 304 35-371 127-460 (464)
214 PRK08354 putative aminotransfe 99.9 7.4E-24 1.6E-28 193.2 31.7 282 9-369 21-309 (311)
215 PRK06702 O-acetylhomoserine am 99.9 4.9E-24 1.1E-28 199.1 30.2 309 40-372 60-424 (432)
216 PRK06084 O-acetylhomoserine am 99.9 3.2E-24 6.9E-29 201.8 29.1 316 33-373 50-423 (425)
217 PRK05967 cystathionine beta-ly 99.9 1.4E-24 2.9E-29 200.7 25.8 308 33-373 56-392 (395)
218 TIGR03588 PseC UDP-4-keto-6-de 99.9 7.6E-24 1.7E-28 198.7 31.3 333 9-370 8-380 (380)
219 PRK03244 argD acetylornithine 99.9 3.7E-24 8E-29 202.2 29.1 316 7-374 58-396 (398)
220 PRK05994 O-acetylhomoserine am 99.9 5.8E-24 1.3E-28 200.6 30.2 307 40-371 62-425 (427)
221 PRK05367 glycine dehydrogenase 99.9 2.2E-23 4.8E-28 210.7 35.9 306 39-375 540-878 (954)
222 PRK06959 putative threonine-ph 99.9 3E-24 6.6E-29 197.7 26.8 272 44-377 56-338 (339)
223 PRK08247 cystathionine gamma-s 99.9 1.2E-24 2.5E-29 202.2 24.1 306 32-372 43-364 (366)
224 PRK07671 cystathionine beta-ly 99.9 3.2E-24 7E-29 199.4 26.9 305 33-370 42-376 (377)
225 PRK07049 methionine gamma-lyas 99.9 3.2E-24 6.8E-29 202.2 26.8 308 33-371 75-425 (427)
226 PRK07050 cystathionine beta-ly 99.9 2E-24 4.3E-29 201.8 25.3 307 33-372 57-391 (394)
227 PTZ00376 aspartate aminotransf 99.9 1.1E-24 2.3E-29 205.8 23.8 316 9-371 44-402 (404)
228 TIGR02379 ECA_wecE TDP-4-keto- 99.9 1.3E-23 2.8E-28 195.3 30.4 329 9-370 9-375 (376)
229 cd00610 OAT_like Acetyl ornith 99.9 6.5E-24 1.4E-28 201.9 28.2 320 6-369 50-412 (413)
230 PRK13034 serine hydroxymethylt 99.9 6.1E-24 1.3E-28 200.3 27.6 337 3-372 34-392 (416)
231 TIGR03576 pyridox_MJ0158 pyrid 99.9 1.1E-23 2.4E-28 193.4 28.3 294 10-370 35-345 (346)
232 TIGR01326 OAH_OAS_sulfhy OAH/O 99.9 1.3E-23 2.7E-28 198.3 29.5 311 35-370 51-417 (418)
233 PF01041 DegT_DnrJ_EryC1: DegT 99.9 7.8E-24 1.7E-28 196.9 27.7 331 11-367 5-363 (363)
234 PRK12566 glycine dehydrogenase 99.9 1.7E-23 3.7E-28 206.5 31.4 311 39-376 541-880 (954)
235 cd00615 Orn_deC_like Ornithine 99.9 6.3E-25 1.4E-29 198.3 18.8 219 41-274 59-293 (294)
236 PF01053 Cys_Met_Meta_PP: Cys/ 99.9 1.1E-23 2.4E-28 194.1 27.3 308 32-371 46-386 (386)
237 PRK08637 hypothetical protein; 99.9 9.1E-24 2E-28 198.6 27.1 320 11-373 19-387 (388)
238 PRK05664 threonine-phosphate d 99.9 1.2E-23 2.6E-28 193.3 27.2 267 44-372 52-328 (330)
239 PLN02955 8-amino-7-oxononanoat 99.9 2.1E-23 4.6E-28 194.2 28.9 323 9-376 117-465 (476)
240 PRK10534 L-threonine aldolase; 99.9 7.1E-24 1.5E-28 195.7 25.3 301 8-371 11-332 (333)
241 PLN02414 glycine dehydrogenase 99.9 2.9E-23 6.2E-28 208.9 31.5 324 2-368 106-465 (993)
242 PRK07269 cystathionine gamma-s 99.9 9.6E-24 2.1E-28 195.0 25.1 302 32-370 45-362 (364)
243 PRK01278 argD acetylornithine 99.9 5.1E-23 1.1E-27 193.8 30.3 320 6-372 45-388 (389)
244 PRK00854 rocD ornithine--oxo-a 99.9 5.1E-23 1.1E-27 194.7 30.0 313 8-371 57-400 (401)
245 COG0112 GlyA Glycine/serine hy 99.9 3.2E-23 6.9E-28 182.3 26.1 335 4-372 33-390 (413)
246 PRK07582 cystathionine gamma-l 99.9 1.9E-23 4.2E-28 193.8 25.9 294 35-367 45-364 (366)
247 PLN02368 alanine transaminase 99.9 1E-23 2.3E-28 197.4 23.7 230 42-286 108-386 (407)
248 COG3844 Kynureninase [Amino ac 99.9 7.5E-23 1.6E-27 174.6 26.5 342 1-373 35-403 (407)
249 COG2873 MET17 O-acetylhomoseri 99.9 1.3E-22 2.8E-27 176.5 28.4 316 32-372 53-425 (426)
250 cd00617 Tnase_like Tryptophana 99.9 3.9E-23 8.5E-28 193.2 26.9 313 40-380 52-415 (431)
251 COG0626 MetC Cystathionine bet 99.9 6.9E-23 1.5E-27 186.2 27.1 311 32-373 54-395 (396)
252 COG1103 Archaea-specific pyrid 99.9 1.1E-22 2.3E-27 169.3 25.4 336 8-373 28-381 (382)
253 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.9 1.8E-22 3.8E-27 188.7 29.9 332 10-370 10-374 (375)
254 KOG0256|consensus 99.9 3.2E-23 6.9E-28 182.0 23.1 294 42-372 122-461 (471)
255 TIGR00707 argD acetylornithine 99.9 1.8E-22 4E-27 189.7 29.8 314 7-369 42-378 (379)
256 COG2008 GLY1 Threonine aldolas 99.9 2.3E-23 4.9E-28 182.3 21.8 312 7-370 10-341 (342)
257 PRK04073 rocD ornithine--oxo-a 99.9 2.4E-22 5.1E-27 189.4 30.5 312 7-370 55-395 (396)
258 TIGR00474 selA seryl-tRNA(sec) 99.9 2.7E-22 6E-27 188.6 30.4 321 1-366 85-453 (454)
259 PRK07505 hypothetical protein; 99.9 3.4E-22 7.4E-27 188.8 31.3 323 8-372 60-399 (402)
260 PRK04311 selenocysteine syntha 99.9 5.3E-22 1.2E-26 187.1 31.8 322 2-370 91-462 (464)
261 PTZ00125 ornithine aminotransf 99.9 2.2E-22 4.7E-27 190.4 28.5 316 8-375 47-398 (400)
262 PF00282 Pyridoxal_deC: Pyrido 99.9 7.3E-22 1.6E-26 182.5 30.6 259 32-298 70-372 (373)
263 PLN02397 aspartate transaminas 99.9 1.4E-22 3E-27 192.0 25.0 311 11-371 65-420 (423)
264 KOG0634|consensus 99.9 4.8E-22 1E-26 176.1 26.4 307 38-374 97-468 (472)
265 PRK02627 acetylornithine amino 99.9 9.2E-22 2E-26 186.1 30.4 315 8-372 55-394 (396)
266 COG0160 GabT 4-aminobutyrate a 99.9 2.4E-21 5.2E-26 178.3 31.9 328 5-373 69-446 (447)
267 TIGR03531 selenium_SpcS O-phos 99.9 2.5E-22 5.4E-27 187.3 24.8 311 39-369 103-443 (444)
268 TIGR03246 arg_catab_astC succi 99.9 2.4E-21 5.2E-26 182.3 31.5 318 6-373 49-396 (397)
269 PF00464 SHMT: Serine hydroxym 99.9 9.6E-23 2.1E-27 186.1 20.8 330 4-366 27-399 (399)
270 PRK05367 glycine dehydrogenase 99.9 1.2E-21 2.6E-26 198.2 30.8 287 40-367 120-437 (954)
271 PRK15407 lipopolysaccharide bi 99.9 3.5E-21 7.5E-26 182.0 32.1 313 42-371 64-435 (438)
272 COG3977 Alanine-alpha-ketoisov 99.9 1.1E-21 2.4E-26 165.5 22.9 312 40-376 77-415 (417)
273 PRK06434 cystathionine gamma-l 99.9 1E-21 2.2E-26 181.7 23.9 303 33-371 56-383 (384)
274 PRK05964 adenosylmethionine--8 99.9 3.2E-21 7E-26 182.8 27.0 331 6-373 56-423 (423)
275 PLN00144 acetylornithine trans 99.9 1.1E-20 2.5E-25 176.3 30.2 316 6-373 29-381 (382)
276 KOG0053|consensus 99.9 6.6E-22 1.4E-26 177.3 20.1 309 33-373 69-407 (409)
277 PRK05093 argD bifunctional N-s 99.9 1.4E-20 2.9E-25 177.9 30.0 318 6-373 54-401 (403)
278 PRK02936 argD acetylornithine 99.9 1.5E-20 3.2E-25 176.4 29.0 308 7-369 44-376 (377)
279 PRK12381 bifunctional succinyl 99.9 1.9E-20 4.2E-25 176.7 29.8 319 6-375 53-402 (406)
280 PRK03715 argD acetylornithine 99.9 4.7E-20 1E-24 172.7 31.8 319 6-373 50-394 (395)
281 PRK08117 4-aminobutyrate amino 99.9 2E-20 4.4E-25 177.9 28.8 327 7-375 58-432 (433)
282 PLN02624 ornithine-delta-amino 99.9 2.3E-20 5.1E-25 178.5 28.6 315 7-373 90-445 (474)
283 TIGR01885 Orn_aminotrans ornit 99.9 4.2E-20 9.1E-25 174.5 29.6 312 8-370 53-400 (401)
284 PRK11522 putrescine--2-oxoglut 99.9 2.6E-20 5.7E-25 176.7 28.1 326 6-376 96-455 (459)
285 PRK08360 4-aminobutyrate amino 99.9 5.6E-20 1.2E-24 174.2 29.9 327 6-375 55-429 (443)
286 PRK04260 acetylornithine amino 99.9 1.8E-19 3.8E-24 168.9 31.8 309 7-369 44-374 (375)
287 KOG1368|consensus 99.9 5.7E-21 1.2E-25 161.1 18.8 315 6-373 31-370 (384)
288 TIGR03811 tyr_de_CO2_Ent tyros 99.9 5.1E-19 1.1E-23 170.7 34.9 336 32-373 114-603 (608)
289 PLN02760 4-aminobutyrate:pyruv 99.9 9E-20 2E-24 174.7 29.2 334 6-375 103-494 (504)
290 cd01494 AAT_I Aspartate aminot 99.9 3.9E-21 8.4E-26 159.6 17.3 162 43-211 2-170 (170)
291 TIGR03372 putres_am_tran putre 99.9 7.2E-20 1.6E-24 172.5 27.8 318 6-369 89-441 (442)
292 PF01276 OKR_DC_1: Orn/Lys/Arg 99.9 3.5E-21 7.6E-26 176.5 18.3 229 42-286 67-329 (417)
293 COG1932 SerC Phosphoserine ami 99.9 7.4E-20 1.6E-24 160.1 25.4 331 4-373 11-364 (365)
294 COG1003 GcvP Glycine cleavage 99.9 3.5E-19 7.6E-24 158.2 29.7 314 40-377 108-452 (496)
295 PRK06541 hypothetical protein; 99.9 1.7E-19 3.7E-24 171.6 28.9 334 6-375 66-458 (460)
296 PF12897 Aminotran_MocR: Alani 99.9 1.7E-20 3.7E-25 165.0 20.2 309 38-373 66-416 (425)
297 KOG1359|consensus 99.9 6.9E-20 1.5E-24 154.3 22.6 316 9-374 82-414 (417)
298 PRK07495 4-aminobutyrate amino 99.9 4.9E-19 1.1E-23 167.1 31.3 327 7-374 55-423 (425)
299 PRK06105 aminotransferase; Pro 99.9 1.8E-19 3.8E-24 171.7 28.3 334 6-375 62-452 (460)
300 COG0001 HemL Glutamate-1-semia 99.9 2.2E-19 4.8E-24 162.3 26.8 314 8-375 69-431 (432)
301 KOG1360|consensus 99.9 1.6E-19 3.4E-24 158.2 24.7 324 9-374 186-526 (570)
302 PRK07678 aminotransferase; Val 99.9 2.1E-19 4.6E-24 170.9 27.7 336 7-373 62-450 (451)
303 PRK06058 4-aminobutyrate amino 99.9 6.2E-19 1.3E-23 167.8 30.6 326 6-372 70-442 (443)
304 PRK13360 omega amino acid--pyr 99.9 5.4E-19 1.2E-23 167.5 29.9 331 6-373 60-441 (442)
305 PRK15029 arginine decarboxylas 99.9 3.4E-19 7.4E-24 175.0 29.2 222 42-279 206-466 (755)
306 PRK06062 hypothetical protein; 99.9 4.8E-19 1E-23 168.3 29.5 327 7-376 68-449 (451)
307 PRK05639 4-aminobutyrate amino 99.9 9.7E-19 2.1E-23 166.2 31.5 328 6-375 67-446 (457)
308 PRK09792 4-aminobutyrate trans 99.9 5.3E-19 1.2E-23 167.1 29.6 324 7-371 55-420 (421)
309 PRK09264 diaminobutyrate--2-ox 99.9 1.5E-18 3.2E-23 164.5 32.5 326 6-375 53-419 (425)
310 TIGR02407 ectoine_ectB diamino 99.9 8E-19 1.7E-23 165.4 30.4 323 6-372 49-412 (412)
311 PRK08593 4-aminobutyrate amino 99.9 9.1E-19 2E-23 166.3 30.7 326 6-375 56-432 (445)
312 KOG1383|consensus 99.9 5.6E-19 1.2E-23 158.2 27.3 312 40-378 119-452 (491)
313 TIGR00700 GABAtrnsam 4-aminobu 99.9 1.8E-18 3.9E-23 163.9 32.4 321 7-371 48-419 (420)
314 PRK09221 beta alanine--pyruvat 99.9 6.8E-19 1.5E-23 167.0 29.2 330 7-373 64-444 (445)
315 PRK06943 adenosylmethionine--8 99.9 8E-19 1.7E-23 166.7 29.0 331 6-373 68-447 (453)
316 PRK06777 4-aminobutyrate amino 99.9 2.6E-18 5.7E-23 162.4 32.4 319 7-370 55-419 (421)
317 PRK13578 ornithine decarboxyla 99.9 4.7E-19 1E-23 172.3 27.6 226 42-284 175-446 (720)
318 PRK06082 4-aminobutyrate amino 99.8 1.9E-18 4E-23 164.5 29.8 328 6-377 85-456 (459)
319 TIGR00709 dat 2,4-diaminobutyr 99.8 4.8E-18 1E-22 161.5 31.3 326 6-373 53-436 (442)
320 PRK06918 4-aminobutyrate amino 99.8 2.7E-18 5.8E-23 163.9 29.8 326 6-375 68-446 (451)
321 PRK05630 adenosylmethionine--8 99.8 1.2E-18 2.7E-23 164.1 27.0 330 6-372 54-420 (422)
322 PRK06916 adenosylmethionine--8 99.8 2E-18 4.3E-23 164.5 28.5 332 7-375 71-458 (460)
323 PRK05769 4-aminobutyrate amino 99.8 7.1E-18 1.5E-22 160.0 32.0 323 6-373 68-440 (441)
324 PRK07482 hypothetical protein; 99.8 2E-18 4.2E-23 164.6 28.2 334 7-373 65-455 (461)
325 TIGR00713 hemL glutamate-1-sem 99.8 2.1E-18 4.6E-23 164.1 28.5 312 7-372 63-422 (423)
326 PRK06173 adenosylmethionine--8 99.8 2.2E-18 4.8E-23 162.6 27.9 329 7-373 59-426 (429)
327 PRK07986 adenosylmethionine--8 99.8 1.3E-18 2.8E-23 163.9 26.2 328 7-372 58-423 (428)
328 PRK12403 putative aminotransfe 99.8 3.4E-18 7.4E-23 162.9 29.3 332 6-374 68-454 (460)
329 PRK05965 hypothetical protein; 99.8 4E-18 8.6E-23 162.4 29.7 332 7-373 61-448 (459)
330 PRK04612 argD acetylornithine 99.8 5.6E-18 1.2E-22 159.1 30.3 321 6-375 54-406 (408)
331 PRK04013 argD acetylornithine/ 99.8 8.2E-18 1.8E-22 155.0 30.0 303 6-373 38-361 (364)
332 PRK08742 adenosylmethionine--8 99.8 3.6E-18 7.8E-23 162.6 28.3 331 7-374 79-469 (472)
333 PRK07030 adenosylmethionine--8 99.8 4.2E-18 9.2E-23 162.2 28.6 330 7-373 62-447 (466)
334 PRK07036 hypothetical protein; 99.8 4.8E-18 1E-22 162.0 28.8 338 7-380 66-460 (466)
335 TIGR02618 tyr_phenol_ly tyrosi 99.8 2.4E-18 5.3E-23 158.4 25.7 306 40-377 70-431 (450)
336 PRK06938 diaminobutyrate--2-ox 99.8 1.1E-17 2.3E-22 159.3 30.9 325 7-373 78-461 (464)
337 KOG1402|consensus 99.8 3.7E-18 8E-23 146.2 24.6 314 7-371 74-426 (427)
338 PRK08088 4-aminobutyrate amino 99.8 1.5E-17 3.3E-22 157.9 30.5 322 7-373 56-424 (425)
339 PRK07483 hypothetical protein; 99.8 1E-17 2.3E-22 158.8 29.0 339 6-374 44-439 (443)
340 PRK06149 hypothetical protein; 99.8 1.5E-17 3.3E-22 171.8 30.9 324 6-372 597-970 (972)
341 COG0161 BioA Adenosylmethionin 99.8 3.7E-18 8.1E-23 156.3 23.2 332 7-375 59-446 (449)
342 PRK07481 hypothetical protein; 99.8 1.6E-17 3.5E-22 158.0 28.1 332 6-373 56-446 (449)
343 PRK07480 putative aminotransfe 99.8 1.3E-17 2.8E-22 158.6 27.3 332 6-375 64-451 (456)
344 PRK07046 aminotransferase; Val 99.8 4.2E-17 9E-22 154.9 30.5 313 7-374 90-452 (453)
345 KOG1404|consensus 99.8 3.2E-18 7E-23 150.0 20.9 322 5-366 63-432 (442)
346 PRK15400 lysine decarboxylase 99.8 1.2E-17 2.6E-22 162.5 27.1 312 42-372 196-559 (714)
347 PRK13237 tyrosine phenol-lyase 99.8 2.8E-17 6.1E-22 151.8 28.2 301 41-377 78-438 (460)
348 PRK12389 glutamate-1-semialdeh 99.8 1.7E-17 3.7E-22 157.3 27.2 311 7-372 68-427 (428)
349 KOG3846|consensus 99.8 3.3E-18 7.2E-23 145.1 19.6 345 3-374 73-463 (465)
350 PRK06917 hypothetical protein; 99.8 3.6E-17 7.8E-22 155.4 29.0 338 6-374 45-439 (447)
351 PRK15399 lysine decarboxylase 99.8 5.8E-17 1.3E-21 157.7 30.2 313 42-374 196-561 (713)
352 PRK06148 hypothetical protein; 99.8 1.8E-17 4E-22 171.2 28.2 327 6-374 636-1012(1013)
353 PLN02482 glutamate-1-semialdeh 99.8 2.5E-17 5.4E-22 156.6 26.6 312 7-372 114-473 (474)
354 TIGR00461 gcvP glycine dehydro 99.8 8E-17 1.7E-21 160.7 31.0 288 40-367 108-426 (939)
355 TIGR00508 bioA adenosylmethion 99.8 5E-17 1.1E-21 153.8 27.7 328 7-372 60-426 (427)
356 PRK06931 diaminobutyrate--2-ox 99.8 1.3E-16 2.8E-21 151.9 30.4 326 7-375 73-457 (459)
357 PRK00062 glutamate-1-semialdeh 99.8 7.2E-17 1.6E-21 153.1 28.0 313 7-373 65-425 (426)
358 PRK00615 glutamate-1-semialdeh 99.8 1.2E-16 2.5E-21 150.8 28.6 321 7-374 68-430 (433)
359 COG1448 TyrB Aspartate/tyrosin 99.8 7.9E-17 1.7E-21 141.9 23.4 317 5-369 41-395 (396)
360 KOG2467|consensus 99.8 2.6E-16 5.7E-21 136.7 24.9 345 5-377 48-431 (477)
361 KOG1357|consensus 99.8 2.5E-17 5.4E-22 146.9 18.1 324 4-373 151-503 (519)
362 KOG0633|consensus 99.8 2.2E-17 4.8E-22 137.0 15.3 284 46-369 74-374 (375)
363 PF01212 Beta_elim_lyase: Beta 99.8 4.5E-19 9.8E-24 157.6 5.4 247 9-284 7-276 (290)
364 TIGR03251 LAT_fam L-lysine 6-t 99.8 9.5E-16 2.1E-20 145.4 28.2 321 7-368 53-430 (431)
365 PF02347 GDC-P: Glycine cleava 99.8 1.4E-15 3.1E-20 139.7 27.0 292 36-366 105-429 (429)
366 TIGR00699 GABAtrns_euk 4-amino 99.8 2.6E-15 5.6E-20 142.0 29.5 320 7-370 73-464 (464)
367 PRK08297 L-lysine aminotransfe 99.7 8.3E-16 1.8E-20 145.9 26.2 326 6-373 59-442 (443)
368 KOG1358|consensus 99.7 1.1E-15 2.3E-20 134.2 24.0 324 9-372 109-465 (467)
369 KOG0629|consensus 99.7 4.6E-16 1E-20 137.8 21.3 315 36-369 136-506 (510)
370 COG1982 LdcC Arginine/lysine/o 99.7 2.5E-15 5.5E-20 140.6 25.1 229 42-286 71-321 (557)
371 PLN02974 adenosylmethionine-8- 99.7 5.6E-15 1.2E-19 147.7 27.2 325 8-370 382-816 (817)
372 KOG1401|consensus 99.7 3.4E-14 7.4E-19 125.9 25.3 249 7-275 71-351 (433)
373 KOG0258|consensus 99.7 1.9E-14 4.2E-19 126.3 23.1 294 9-323 87-441 (475)
374 COG0403 GcvP Glycine cleavage 99.7 1.6E-13 3.4E-18 122.6 29.0 296 41-369 120-447 (450)
375 KOG2040|consensus 99.7 2.3E-14 5E-19 133.1 24.4 313 39-379 580-925 (1001)
376 PRK06209 glutamate-1-semialdeh 99.7 2.1E-14 4.5E-19 136.3 23.4 248 6-275 62-328 (431)
377 PF00202 Aminotran_3: Aminotra 99.7 2.5E-14 5.4E-19 131.4 21.8 252 6-275 30-315 (339)
378 TIGR02617 tnaA_trp_ase tryptop 99.7 7.4E-14 1.6E-18 127.7 24.1 329 8-377 54-446 (467)
379 PF03841 SelA: L-seryl-tRNA se 99.6 2.2E-16 4.7E-21 140.3 4.6 251 5-275 14-295 (367)
380 COG1921 SelA Selenocysteine sy 99.6 9E-14 2E-18 124.7 18.3 225 5-253 35-271 (395)
381 KOG0628|consensus 99.6 3.7E-12 7.9E-17 114.7 27.8 309 41-376 113-475 (511)
382 PF05889 SLA_LP_auto_ag: Solub 99.5 1.7E-13 3.7E-18 123.0 15.4 301 42-371 57-389 (389)
383 PF06838 Met_gamma_lyase: Meth 99.5 3.1E-12 6.7E-17 112.7 22.4 173 41-219 54-246 (403)
384 KOG2790|consensus 99.5 4.7E-12 1E-16 106.9 21.9 334 4-372 13-368 (370)
385 PRK12566 glycine dehydrogenase 99.5 1.5E-11 3.2E-16 122.8 28.5 285 39-367 122-439 (954)
386 KOG1403|consensus 99.4 4.1E-11 8.8E-16 102.1 19.3 329 5-376 58-441 (452)
387 COG3033 TnaA Tryptophanase [Am 99.4 6.5E-10 1.4E-14 97.3 23.5 304 42-373 80-445 (471)
388 PF04864 Alliinase_C: Allinase 99.3 4.1E-11 8.8E-16 105.0 15.2 285 42-369 44-362 (363)
389 KOG1412|consensus 99.3 5.7E-10 1.2E-14 95.7 19.3 292 42-375 75-408 (410)
390 COG4100 Cystathionine beta-lya 99.0 1E-08 2.2E-13 87.8 12.5 171 42-217 66-255 (416)
391 KOG2040|consensus 98.9 1.2E-07 2.6E-12 89.2 18.8 284 42-367 164-478 (1001)
392 KOG1411|consensus 98.8 1.3E-07 2.9E-12 82.6 12.2 264 64-371 126-424 (427)
393 KOG1405|consensus 98.6 1.2E-06 2.7E-11 76.9 14.8 205 125-372 254-483 (484)
394 KOG3843|consensus 98.3 3.3E-06 7.2E-11 71.4 8.2 178 42-224 58-253 (432)
395 PLN02994 1-aminocyclopropane-1 98.0 3.5E-05 7.6E-10 61.8 8.5 55 40-98 95-153 (153)
396 KOG2142|consensus 95.8 0.036 7.7E-07 53.5 7.7 356 2-370 25-429 (728)
397 PLN02672 methionine S-methyltr 85.9 8.7 0.00019 41.1 11.2 132 37-174 422-565 (1082)
398 KOG0630|consensus 85.4 35 0.00077 32.7 22.3 189 87-286 232-442 (838)
399 KOG1465|consensus 83.3 33 0.00071 30.6 14.2 104 60-174 164-272 (353)
400 COG0656 ARA1 Aldo/keto reducta 79.1 34 0.00074 30.5 10.8 140 13-171 30-188 (280)
401 PRK13397 3-deoxy-7-phosphohept 78.7 45 0.00097 29.2 13.6 124 41-180 66-198 (250)
402 COG1504 Uncharacterized conser 73.9 9.9 0.00021 28.1 4.9 50 123-174 48-97 (121)
403 PF01008 IF-2B: Initiation fac 71.8 71 0.0015 28.5 11.3 108 57-175 106-219 (282)
404 PF02310 B12-binding: B12 bind 71.1 17 0.00036 27.5 6.3 68 103-176 21-91 (121)
405 PF05368 NmrA: NmrA-like famil 71.0 44 0.00095 28.7 9.6 63 103-171 37-99 (233)
406 COG2870 RfaE ADP-heptose synth 70.9 11 0.00025 35.0 5.8 80 90-173 95-178 (467)
407 COG0108 RibB 3,4-dihydroxy-2-b 69.6 9.7 0.00021 31.7 4.6 37 134-171 154-190 (203)
408 PRK13396 3-deoxy-7-phosphohept 69.5 96 0.0021 28.8 14.5 124 41-180 152-285 (352)
409 PRK06372 translation initiatio 69.3 80 0.0017 27.8 14.2 98 59-171 87-190 (253)
410 PF02603 Hpr_kinase_N: HPr Ser 68.7 7.8 0.00017 30.0 3.8 40 127-172 72-111 (127)
411 COG2185 Sbm Methylmalonyl-CoA 68.6 25 0.00055 27.7 6.5 78 85-167 11-92 (143)
412 COG0552 FtsY Signal recognitio 67.4 48 0.001 30.3 8.9 126 78-209 159-304 (340)
413 TIGR02990 ectoine_eutA ectoine 67.1 85 0.0018 27.3 10.3 94 68-171 108-211 (239)
414 COG1184 GCD2 Translation initi 67.0 98 0.0021 27.9 13.1 104 57-173 118-228 (301)
415 smart00642 Aamy Alpha-amylase 66.8 16 0.00035 29.8 5.5 29 148-176 65-93 (166)
416 PF01976 DUF116: Protein of un 66.2 54 0.0012 26.5 8.3 74 49-133 80-157 (158)
417 TIGR00511 ribulose_e2b2 ribose 66.1 1E+02 0.0022 27.9 11.7 106 57-174 114-225 (301)
418 cd02070 corrinoid_protein_B12- 65.0 84 0.0018 26.4 13.2 125 41-173 33-172 (201)
419 COG1105 FruK Fructose-1-phosph 64.3 48 0.0011 30.0 8.4 52 123-175 110-168 (310)
420 COG1954 GlpP Glycerol-3-phosph 63.8 17 0.00037 29.4 4.8 50 125-179 12-63 (181)
421 TIGR00524 eIF-2B_rel eIF-2B al 62.1 1.2E+02 0.0027 27.4 14.1 107 58-174 118-239 (303)
422 TIGR02026 BchE magnesium-proto 61.9 54 0.0012 32.1 9.1 89 102-194 28-121 (497)
423 PRK08535 translation initiatio 61.8 1.3E+02 0.0028 27.5 11.5 106 57-174 119-230 (310)
424 TIGR01305 GMP_reduct_1 guanosi 61.4 70 0.0015 29.3 8.8 133 60-195 97-241 (343)
425 PF13407 Peripla_BP_4: Peripla 61.1 38 0.00082 29.4 7.4 57 110-171 28-85 (257)
426 COG1058 CinA Predicted nucleot 60.6 26 0.00057 30.7 5.9 83 86-174 10-95 (255)
427 KOG1467|consensus 60.3 1.7E+02 0.0036 28.3 13.9 108 57-174 358-469 (556)
428 PRK08335 translation initiatio 60.1 1.3E+02 0.0028 26.9 13.3 104 57-172 108-217 (275)
429 PF04413 Glycos_transf_N: 3-De 58.9 74 0.0016 26.5 8.2 102 60-174 22-127 (186)
430 PRK05096 guanosine 5'-monophos 57.8 77 0.0017 29.1 8.5 132 60-194 98-241 (346)
431 TIGR02313 HpaI-NOT-DapA 2,4-di 57.8 1.5E+02 0.0031 26.8 11.8 37 137-174 128-165 (294)
432 PRK10886 DnaA initiator-associ 57.8 94 0.002 26.1 8.6 45 128-176 102-146 (196)
433 PF04309 G3P_antiterm: Glycero 57.8 4.5 9.6E-05 33.2 0.7 51 125-180 8-60 (175)
434 TIGR03600 phage_DnaB phage rep 57.1 91 0.002 29.8 9.6 16 86-101 223-238 (421)
435 COG0296 GlgB 1,4-alpha-glucan 57.1 9.6 0.00021 38.0 2.9 38 139-176 200-237 (628)
436 KOG2142|consensus 57.0 7.3 0.00016 38.3 2.0 166 46-216 181-364 (728)
437 TIGR02370 pyl_corrinoid methyl 56.8 1.2E+02 0.0026 25.5 13.2 62 106-173 108-174 (197)
438 cd05126 Mth938 Mth938 domain. 56.7 36 0.00079 25.9 5.4 51 123-175 45-95 (117)
439 TIGR00649 MG423 conserved hypo 56.3 1.5E+02 0.0033 28.3 11.0 77 85-167 318-401 (422)
440 COG1908 FrhD Coenzyme F420-red 55.6 41 0.00089 25.5 5.3 44 330-380 85-128 (132)
441 TIGR00608 radc DNA repair prot 55.6 63 0.0014 27.7 7.3 42 127-169 150-198 (218)
442 PF07085 DRTGG: DRTGG domain; 55.5 81 0.0017 23.2 7.3 50 112-172 42-91 (105)
443 PF00926 DHBP_synthase: 3,4-di 54.7 30 0.00065 29.0 5.1 36 135-171 151-186 (194)
444 PRK00024 hypothetical protein; 54.5 57 0.0012 28.1 6.9 43 127-170 156-205 (224)
445 COG0505 CarA Carbamoylphosphat 53.7 79 0.0017 29.1 7.8 69 85-165 178-246 (368)
446 cd01137 PsaA Metal binding pro 53.5 1.2E+02 0.0027 27.1 9.3 71 86-169 177-252 (287)
447 PF00290 Trp_syntA: Tryptophan 53.0 1.6E+02 0.0035 26.0 14.9 82 87-171 117-203 (259)
448 cd01455 vWA_F11C1-5a_type Von 52.7 34 0.00074 28.6 5.1 35 138-172 114-148 (191)
449 TIGR01470 cysG_Nterm siroheme 52.2 1.5E+02 0.0032 25.1 9.7 92 60-174 11-103 (205)
450 COG2515 Acd 1-aminocyclopropan 51.9 1.1E+02 0.0024 27.5 8.3 118 60-178 65-192 (323)
451 COG0329 DapA Dihydrodipicolina 51.7 1.9E+02 0.004 26.2 11.8 153 43-198 24-192 (299)
452 TIGR02402 trehalose_TreZ malto 51.4 35 0.00076 33.8 5.9 32 145-176 152-183 (542)
453 PF00128 Alpha-amylase: Alpha 50.8 15 0.00032 33.0 3.1 32 145-176 44-75 (316)
454 COG0616 SppA Periplasmic serin 50.6 1.5E+02 0.0032 27.1 9.4 84 124-213 80-172 (317)
455 cd00984 DnaB_C DnaB helicase C 50.1 1.5E+02 0.0033 25.4 9.3 48 124-171 106-168 (242)
456 cd02067 B12-binding B12 bindin 49.8 1.1E+02 0.0024 23.0 7.4 64 105-174 22-89 (119)
457 COG0352 ThiE Thiamine monophos 48.1 55 0.0012 27.9 5.7 49 126-174 24-73 (211)
458 PRK11070 ssDNA exonuclease Rec 47.8 2.2E+02 0.0048 28.6 10.7 99 65-173 53-158 (575)
459 cd01121 Sms Sms (bacterial rad 47.8 2.1E+02 0.0045 26.9 10.1 47 125-171 146-205 (372)
460 CHL00200 trpA tryptophan synth 47.5 2E+02 0.0044 25.4 14.6 83 87-172 121-208 (263)
461 cd08071 MPN_DUF2466 Mov34/MPN/ 47.1 44 0.00095 25.2 4.6 45 124-169 46-98 (113)
462 PLN03013 cysteine synthase 47.0 99 0.0022 29.6 7.8 82 61-148 178-259 (429)
463 KOG2865|consensus 46.9 1.4E+02 0.0031 26.7 8.1 81 84-168 83-170 (391)
464 TIGR00506 ribB 3,4-dihydroxy-2 46.8 44 0.00095 28.1 4.9 34 136-170 157-190 (199)
465 PRK06091 membrane protein FdrA 46.6 1E+02 0.0023 30.4 8.0 72 95-174 104-175 (555)
466 COG2099 CobK Precorrin-6x redu 46.5 36 0.00078 29.7 4.4 26 153-178 53-78 (257)
467 TIGR03249 KdgD 5-dehydro-4-deo 46.2 2.2E+02 0.0049 25.6 11.9 27 148-174 138-165 (296)
468 PRK00414 gmhA phosphoheptose i 46.1 1.6E+02 0.0034 24.6 8.3 38 134-175 110-147 (192)
469 smart00481 POLIIIAc DNA polyme 45.7 63 0.0014 21.3 4.8 46 121-170 12-58 (67)
470 COG0159 TrpA Tryptophan syntha 45.1 2.2E+02 0.0048 25.2 14.7 82 86-170 123-209 (265)
471 PLN02361 alpha-amylase 45.1 60 0.0013 30.8 6.1 69 98-175 30-98 (401)
472 PRK01792 ribB 3,4-dihydroxy-2- 44.9 48 0.001 28.2 4.8 34 136-170 167-200 (214)
473 PRK06371 translation initiatio 44.7 2.5E+02 0.0055 25.8 12.2 82 85-174 169-257 (329)
474 PF04002 RadC: RadC-like JAB d 44.6 47 0.001 25.4 4.5 46 123-169 50-103 (123)
475 PTZ00314 inosine-5'-monophosph 44.3 84 0.0018 30.8 7.1 54 123-176 290-354 (495)
476 PRK05678 succinyl-CoA syntheta 44.1 56 0.0012 29.4 5.5 48 125-176 78-126 (291)
477 COG0031 CysK Cysteine synthase 43.6 2.5E+02 0.0054 25.4 9.5 83 60-148 64-148 (300)
478 PRK14106 murD UDP-N-acetylmura 43.6 2E+02 0.0043 27.6 9.7 94 60-175 7-101 (450)
479 PRK02261 methylaspartate mutas 43.5 1.6E+02 0.0034 23.1 8.2 53 107-165 28-81 (137)
480 TIGR00640 acid_CoA_mut_C methy 43.5 1.5E+02 0.0034 23.0 7.7 59 107-171 27-89 (132)
481 PLN02565 cysteine synthase 43.5 1.2E+02 0.0026 27.8 7.7 53 61-119 70-122 (322)
482 PRK00014 ribB 3,4-dihydroxy-2- 43.5 52 0.0011 28.3 4.9 34 136-170 172-205 (230)
483 COG2121 Uncharacterized protei 43.2 1.2E+02 0.0026 25.7 6.7 82 86-173 68-153 (214)
484 COG2102 Predicted ATPases of P 43.2 2.1E+02 0.0046 24.5 9.5 99 60-170 3-116 (223)
485 PRK12595 bifunctional 3-deoxy- 42.9 2.9E+02 0.0062 25.9 13.8 122 41-179 169-300 (360)
486 cd01542 PBP1_TreR_like Ligand- 42.8 1.3E+02 0.0028 25.9 7.8 68 98-172 16-84 (259)
487 cd00532 MGS-like MGS-like doma 42.8 1.4E+02 0.003 22.3 11.0 81 84-174 23-107 (112)
488 PRK00910 ribB 3,4-dihydroxy-2- 42.7 55 0.0012 27.9 4.9 34 136-170 168-201 (218)
489 COG0156 BioF 7-keto-8-aminopel 42.6 3E+02 0.0065 26.0 12.8 149 40-208 56-223 (388)
490 cd06282 PBP1_GntR_like_2 Ligan 42.5 1.3E+02 0.0028 26.0 7.7 74 94-173 12-87 (266)
491 cd03033 ArsC_15kD Arsenate Red 42.4 82 0.0018 23.7 5.4 48 87-135 1-48 (113)
492 cd06300 PBP1_ABC_sugar_binding 42.4 1.1E+02 0.0024 26.7 7.3 41 126-171 50-90 (272)
493 cd01017 AdcA Metal binding pro 42.2 1.9E+02 0.0041 25.8 8.7 73 85-170 170-247 (282)
494 COG1066 Sms Predicted ATP-depe 41.9 3.2E+02 0.0069 26.1 10.9 48 124-171 155-215 (456)
495 cd02072 Glm_B12_BD B12 binding 41.6 87 0.0019 24.3 5.4 63 106-174 23-89 (128)
496 PRK05595 replicative DNA helic 41.6 1.5E+02 0.0032 28.7 8.4 13 86-98 230-242 (444)
497 TIGR02634 xylF D-xylose ABC tr 41.5 79 0.0017 28.4 6.3 73 95-172 12-85 (302)
498 PRK09441 cytoplasmic alpha-amy 41.4 23 0.00051 34.5 2.9 31 145-175 73-103 (479)
499 cd01018 ZntC Metal binding pro 41.3 2.2E+02 0.0047 25.1 8.9 73 85-171 169-245 (266)
500 PF00265 TK: Thymidine kinase; 40.9 42 0.0009 27.7 3.9 83 84-174 27-111 (176)
No 1
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=100.00 E-value=8.9e-62 Score=431.55 Aligned_cols=377 Identities=59% Similarity=0.933 Sum_probs=360.1
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHh
Q psy8850 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAH 80 (397)
Q Consensus 1 ~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~ 80 (397)
|||++++|+.++|.++|..++...++||++ .|.+|+...+.++++|+.+++++|+++++|+||+|+|+++++++++...
T Consensus 5 lD~~ATTp~~~~v~~~m~~~~~~~fgNPsS-~H~~G~~A~~~ve~AR~~iA~llga~~~eIiFTSG~TEsnNlaI~g~~~ 83 (386)
T COG1104 5 LDNAATTPVDPEVLEAMLPYLTEVFGNPSS-LHSFGREARKAVEEAREQIAKLLGADPEEIIFTSGATESNNLAIKGAAL 83 (386)
T ss_pred ccccccCCCCHHHHHHHHHHHHhhcCCccc-hhHhHHHHHHHHHHHHHHHHHHhCCCCCeEEEecCCcHHHHHHHHhhHH
Confidence 799999999999999999999999999999 9999999999999999999999999999999999999999999998554
Q ss_pred hhc--cCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHH
Q psy8850 81 FYK--KRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEI 158 (397)
Q Consensus 81 ~~~--~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i 158 (397)
.+. +++.+|+++.-+|++....++.+...|++|+++|++.+|.+|+++|+++++++|.+|.+.+.+|.+|++.|+++|
T Consensus 84 a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~~G~v~~e~L~~al~~~T~LVSim~aNnE~G~IQpI~ei 163 (386)
T COG1104 84 AYRNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDSNGLVDLEQLEEALRPDTILVSIMHANNETGTIQPIAEI 163 (386)
T ss_pred hhhcccCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCCCCeEcHHHHHHhcCCCceEEEEEecccCeeecccHHHH
Confidence 442 368899999999999999999997779999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCcEEEEecccccCccccccCcccccEEEeccccccCCCCceEEEEecCCCCccccccccCCccccccCCCCch
Q psy8850 159 GELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLAT 238 (397)
Q Consensus 159 ~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (397)
.++|+++|+++|+|++|++|..++|+..+++|++++|.||+.||.|+|++++++ ...+.+.+.||++..++++||.|.
T Consensus 164 ~~i~k~~~i~fHvDAvQa~Gkipi~~~~~~vD~ls~SaHK~~GpkGiGaLyv~~--~~~~~p~i~GGgQE~g~RsGTenv 241 (386)
T COG1104 164 GEICKERGILFHVDAVQAVGKIPIDLEELGVDLLSFSAHKFGGPKGIGALYVRP--GVRLEPLIHGGGQERGLRSGTENV 241 (386)
T ss_pred HHHHHHcCCeEEEehhhhcCceeccccccCcceEEeehhhccCCCceEEEEECC--CCccCceeccCcCCCCCCCCCccH
Confidence 999999999999999999999999999989999999999999999999999963 556789999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCChHHHHHHhC--CcEec
Q psy8850 239 HQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAIK--DIAVS 316 (397)
Q Consensus 239 ~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~i~~~ 316 (397)
++++++..|++...+.++...+++..++++|.+.|.+..|++.+.+.+..+.++.+.+.|++.+.+.+...|. ||+++
T Consensus 242 ~~Ivg~~~A~~~a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~gv~gE~ll~~L~~~gI~vS 321 (386)
T COG1104 242 PGIVGFGKAAEIAVEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSFPGVEGESLLLALDLAGIAVS 321 (386)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEeCCCcHHHHHHhccccCeEEe
Confidence 9999999999999999999999999999999999998569999998888899999999999999999999998 99999
Q ss_pred ccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHHHhcCccc
Q psy8850 317 SGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKLRELSPLW 380 (397)
Q Consensus 317 ~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~ 380 (397)
.|+.|+.+..+||++|.++|.+....++.||||++..++++|+|++++.|.++++++++.+|+|
T Consensus 322 tGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~~i~~lr~~~~~~ 385 (386)
T COG1104 322 TGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALKEIIKRLRELSPLW 385 (386)
T ss_pred ccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHHHHHHHHHhhhcccc
Confidence 9999999999999999999999999999999999999999999999999999999999999988
No 2
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=100.00 E-value=1.5e-53 Score=402.18 Aligned_cols=396 Identities=70% Similarity=1.138 Sum_probs=353.2
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHh
Q psy8850 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAH 80 (397)
Q Consensus 1 ~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~ 80 (397)
||+++++|+|+.+++++.+++...+++|.+..+..++...+.++++++.+++++|+++++|++++|+|+++++++.++..
T Consensus 7 ld~aa~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~ 86 (402)
T TIGR02006 7 LDYAATTPVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGADSREIVFTSGATESNNLAIKGIAH 86 (402)
T ss_pred eeCCcCCCCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHH
Confidence 79999999999999999999877677877534555556667899999999999999888999999999999999887653
Q ss_pred hhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHH
Q psy8850 81 FYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGE 160 (397)
Q Consensus 81 ~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~ 160 (397)
...++|++|+++.++|+++...+..+...|.+++.++.++++.+|+++++++++++++++++++++|+||.+.|+++|.+
T Consensus 87 ~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~lv~v~~~~n~tG~~~~~~~I~~ 166 (402)
T TIGR02006 87 FYKSKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPKSNGLIDLEELKAAIRDDTILVSIMHVNNEIGVIQDIAAIGE 166 (402)
T ss_pred hhcCCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhcCCCCEEEEEECCCcCceecccHHHHHH
Confidence 33367899999999999999888776666999999999988889999999999999999999999999999999999999
Q ss_pred HHHhcCcEEEEecccccCccccccCcccccEEEeccccccCCCCceEEEEecCCCCccccccccCCccccccCCCCchhH
Q psy8850 161 LCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQ 240 (397)
Q Consensus 161 l~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (397)
+|+++|+++++|+++++|..++++..+++|++++|+||++||.|+|+++++++....+.+...+++...+++.|+++...
T Consensus 167 l~~~~g~~livD~a~a~g~~~~~~~~~~~D~~~~s~~K~~gp~G~G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~ 246 (402)
T TIGR02006 167 ICRERKVFFHVDAAQSVGKIPINVNELKVDLMSISGHKIYGPKGIGALYVRRKPRVRLEALIHGGGHERGMRSGTLPTHQ 246 (402)
T ss_pred HHHHcCCEEEEEcchhcCCcccCccccCCCEEEEehhhhcCCCceEEEEEccCCCCCCCceecCCCccCCccCCCccHHH
Confidence 99999999999999999999989888899999999999889989999999987776677766666666678889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCChHHHHHHhCCcEecccCc
Q psy8850 241 IVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAIKDIAVSSGSA 320 (397)
Q Consensus 241 ~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~~ 320 (397)
+.++.++++++.++++...++..++++++.+.|++ ++++.+.++...+.+..+.+.|+..+...+...++++.++.|..
T Consensus 247 ~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~-~~~v~~~~~~~~~~p~~~~v~f~~~~~~~~~~~l~~i~v~~G~~ 325 (402)
T TIGR02006 247 IVGMGEAFRIAKEEMAQDTAHVLALRDRLLNGIKS-IEEVYLNGDLEHRVPGNLNVSFNYVEGESLIMALKDLAVSSGSA 325 (402)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhc-CCCEEEeCCccccCCCeEEEEEeCcCHHHHHHhcCCEEEechhh
Confidence 99999999998888888999999999999999998 88888876544455555567787767778888888999999999
Q ss_pred cCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHHHhcCccchhhhccccccccccccC
Q psy8850 321 CTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKLRELSPLWDMHKEGIDLNTIKWAIH 397 (397)
Q Consensus 321 ~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (397)
|.+....+++.++.+|+......+.||+|++.++|++|||++++.|+++++.+++..+.|+|-+++-|+++++|+-|
T Consensus 326 c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (402)
T TIGR02006 326 CTSASLEPSYVLRALGINDELAHSSIRFTIGRFTTEEEIDYAVKLVKSAIDKLRELSPLWEMFKEGVDLNSIEWAAH 402 (402)
T ss_pred cCCCCCCccHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhcchhhhccccCCccccCCCCC
Confidence 99988888999999999877778999999999999999999999999999999999999999999999999999988
No 3
>PRK14012 cysteine desulfurase; Provisional
Probab=100.00 E-value=1.1e-51 Score=389.83 Aligned_cols=396 Identities=70% Similarity=1.149 Sum_probs=342.7
Q ss_pred CCCCCCCCCCHHHHHHHHHHHh--hccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHh
Q psy8850 1 MDYSATTPIDPRVVDKMIPYLR--VQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGA 78 (397)
Q Consensus 1 ~~~~~~~~~~~~v~~a~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l 78 (397)
||+++++|+|+.+++++.+++. ..++++++..+..++...+...++++.+++++|++++++++++|+|+|+++++.++
T Consensus 7 ld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~~v~~~~g~t~al~~~l~~l 86 (404)
T PRK14012 7 LDYSATTPVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGADPREIVFTSGATESDNLAIKGA 86 (404)
T ss_pred ecCcCCCCCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcCeEEEeCCHHHHHHHHHHHH
Confidence 7999999999999999999987 55667765344445555678889999999999998888999999999999998877
Q ss_pred HhhhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHH
Q psy8850 79 AHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEI 158 (397)
Q Consensus 79 ~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i 158 (397)
.....++||+|++++.+|+++...+..+...|.+++.++.++++.+|++++++++++++++|++++++|+||.+.|+++|
T Consensus 87 ~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~~~~I 166 (404)
T PRK14012 87 AHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQSNGIIDLEKLEAAMRDDTILVSIMHVNNEIGVIQDIAAI 166 (404)
T ss_pred HHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccCCCCcCCHHHHHHhcCCCCEEEEEECcCCCccchhhHHHH
Confidence 54333678999999999999988887766669999999999889899999999999999999999999999999999999
Q ss_pred HHHHHhcCcEEEEecccccCccccccCcccccEEEeccccccCCCCceEEEEecCCCCccccccccCCccccccCCCCch
Q psy8850 159 GELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLAT 238 (397)
Q Consensus 159 ~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (397)
.++||++|+++|+|++++.|..++++...++|++++|+||++||.|+|+++++++....+.+...+++...+++.++++.
T Consensus 167 ~~la~~~g~~vivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~gp~g~G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt~~~ 246 (404)
T PRK14012 167 GEICRERGIIFHVDAAQSVGKVPIDLSKLKVDLMSFSAHKIYGPKGIGALYVRRKPRVRLEAQMHGGGHERGMRSGTLPT 246 (404)
T ss_pred HHHHHHcCCEEEEEcchhcCCcccCcccCCCCEEEEehhhccCCCceEEEEEecCCCCCCCceecCCCccCCccCCCcCH
Confidence 99999999999999999999988888878899999999998888889999999876666666566655555577889999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCChHHHHHHhCCcEeccc
Q psy8850 239 HQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAIKDIAVSSG 318 (397)
Q Consensus 239 ~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g 318 (397)
..++++.++++....++....++..++++++.+.|++ ++++.+.+......+..+.+.|...+..++...|+++.+..|
T Consensus 247 ~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~g 325 (404)
T PRK14012 247 HQIVGMGEAARIAKEEMATENERIRALRDRLWNGIKD-IEEVYLNGDLEQRVPGNLNVSFNYVEGESLIMALKDLAVSSG 325 (404)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhc-CCCEEEeCCccccCCCEEEEEEeCcCHHHHHHhCCCeEEEch
Confidence 9999999999988777788889999999999999998 888887654333334455566654455678888889999999
Q ss_pred CccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHHHhcCccchhhhccccccccccccC
Q psy8850 319 SACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKLRELSPLWDMHKEGIDLNTIKWAIH 397 (397)
Q Consensus 319 ~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (397)
..|.+....+.+.+..+++......+.||++++.++|++|+|++++.|+++++.+++.++.|+|-+++-|.++++|+||
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~~dvd~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (404)
T PRK14012 326 SACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYAIELVRKSIGKLRELSPLWEMFKEGVDLNSIEWAHH 404 (404)
T ss_pred hhhCCCCCCCCHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhccchhhccccCCCCccCCCCC
Confidence 9998877777777888888777778999999999999999999999999999999999999999999999999999999
No 4
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.6e-51 Score=377.94 Aligned_cols=358 Identities=30% Similarity=0.454 Sum_probs=327.7
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCC-CcEEEeCChhHHHHHHHHHhH
Q psy8850 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADP-REIIWTSGATESNNLAIKGAA 79 (397)
Q Consensus 1 ~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~-~~i~~~~g~t~a~~~~l~~l~ 79 (397)
||++++++.|..|.+++.+++..+++|++++.|..+....+.++++|+.+++++|+++ ++|+||.|+|+|+++++.++.
T Consensus 26 lD~aa~~~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT~aln~va~~l~ 105 (405)
T COG0520 26 LDNAATSQKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSSDEIVFTRGTTEALNLVARGLG 105 (405)
T ss_pred ecCcccccCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChhHHHHHHHHHhh
Confidence 6999999999999999999999989999988888888889999999999999999985 889999999999999999985
Q ss_pred hhhccCCCEEEEcCCCChhhHHHHHHHhhC-CcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHH
Q psy8850 80 HFYKKRGKHIITVQTEHKSVLDSIRKLEND-GFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEI 158 (397)
Q Consensus 80 ~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~-g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i 158 (397)
.. .++||+|++++.+|+++...|..+++. |++++++|.+++|.++.++++++++++|++|.+++.+|.||.+.|+++|
T Consensus 106 ~~-~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~~g~~~~~~~~~~i~~~Tklvais~vSn~tG~~~pv~~I 184 (405)
T COG0520 106 RS-LKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDDDGLLDLDALEKLITPKTKLVALSHVSNVTGTVNPVKEI 184 (405)
T ss_pred hh-hcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecCCCCCcCHHHHHHhcCCCceEEEEECccccccccchHHHH
Confidence 32 167899999999999999999999876 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCcEEEEecccccCccccccCcccccEEEecccc-ccCCCCceEEEEecCCCCccccccccCCc----------
Q psy8850 159 GELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEAQIHGGGH---------- 227 (397)
Q Consensus 159 ~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~~s~~K-~~g~~g~g~~~~~~~~~~~~~~~~~~~~~---------- 227 (397)
+++||++|+++++|++|+.+..++|++.+++|++++|+|| ++||.|+|+++++++..+.+.|...||..
T Consensus 185 ~~la~~~ga~v~VDaaq~~~h~~idv~~l~~Df~afsgHKwl~gP~GiGvLy~r~~~l~~l~P~~~gg~~~~~~~~~~~~ 264 (405)
T COG0520 185 AELAHEHGALVLVDAAQAAGHLPIDVQELGCDFLAFSGHKWLLGPTGIGVLYVRKELLEELEPFLGGGGMIEYVSRDEGV 264 (405)
T ss_pred HHHHHHcCCEEEEECccccCccCCCchhcCCCEEEEcccccccCCCceEEEEEchHHHhhcCCcccCCCceeeecccccc
Confidence 9999999999999999999999999999999999999999 89999999999999999998877766532
Q ss_pred -----cccccCCCCchhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCC
Q psy8850 228 -----EYGLRSGTLATHQIVGMGEAFRLARI-EMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFI 301 (397)
Q Consensus 228 -----~~~~~~~~~~~~~~~~l~~al~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (397)
..+|+.||+|..+.+++.++++++.+ ++.++.++.+++.+++.+.|.+ ++++.+++++......++.|.+++.
T Consensus 265 ~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~~~~L~~-~~~v~i~g~~~~~r~~~vsF~v~~~ 343 (405)
T COG0520 265 TLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYLLEGLSE-LPGVEIYGPPDADRGGIVSFNVKGI 343 (405)
T ss_pred cccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhc-CCCeEEecCCcccCceEEEEEeCCC
Confidence 35678999999999999999999976 6899999999999999999999 9999999876533367889999999
Q ss_pred ChHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHH
Q psy8850 302 EGESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVK 371 (397)
Q Consensus 302 ~~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 371 (397)
...++...|. +|+++.|.+|.. ..++.++.. ..+|+|++.|+|.+|||+++++|+++.+
T Consensus 344 ~~~dv~~~L~~~gI~vr~g~~ca~------p~~~~~~~~-----~~iR~S~~~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 344 HPHDVATLLDEKGIAVRAGHHCAQ------PLHRLLGVD-----ATIRASLHLYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred CHHHHHHHHHhCCeEEEecccccc------HHHHhcCCC-----CceEEEEeecCCHHHHHHHHHHHHHHhh
Confidence 9999999997 899999999986 456666666 4599999999999999999999998764
No 5
>KOG1549|consensus
Probab=100.00 E-value=8.3e-52 Score=368.74 Aligned_cols=380 Identities=56% Similarity=0.911 Sum_probs=343.6
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHh
Q psy8850 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAH 80 (397)
Q Consensus 1 ~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~ 80 (397)
||+++++|+++.|.+++.+++...++||++ . .++|......++.|+.+|+++|+++.+|+||+|+|+++++++++..+
T Consensus 47 ld~~at~p~~~~Vldam~~~~~~~~~nPh~-~-~y~w~~~~~~E~aR~~VAklInAd~~dIiFts~ATEs~Nlvl~~v~~ 124 (428)
T KOG1549|consen 47 LDNQATGPMDPRVLDAMLPYLLEYLGNPHS-R-SYGWKAEDAVEAAREQVAKLINADPSDIVFTSGATESNNLVLKGVAR 124 (428)
T ss_pred EecCcCCCCCHHHHHHHHHHHHHhhcCCCc-c-ccchhhhHHHHHHHHHHHHHhCCCCCcEEEeCCchHHHHHHHHHhhc
Confidence 699999999999999999999999999999 4 56777788899999999999999988899999999999999999887
Q ss_pred hhcc-CCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHH
Q psy8850 81 FYKK-RGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIG 159 (397)
Q Consensus 81 ~~~~-~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~ 159 (397)
.+.+ ...+|++.+.+|++...++..+.+.|+.++.+|++.+|.+|++.+++.|+++|++|.+.+.+|.+|++.|+++|+
T Consensus 125 ~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~~~~~~d~~~~~~~i~~~T~lv~I~~Vnn~~gv~~Pv~EI~ 204 (428)
T KOG1549|consen 125 FFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVEDSGLVDISKLREAIRSKTRLVSIMHVNNEIGVLQPVKEIV 204 (428)
T ss_pred cccccccceEEEecccCcchhHHHHHHHhcCeEEEEeccCccccccHHHHHHhcCCCceEEEEEecccCccccccHHHHH
Confidence 4432 223999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCcEEEEecccccCccccccCcccccEEEeccccccCCCCceEEEEec-CCCCccccccccCCccccccCCCCch
Q psy8850 160 ELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIRR-NPRTRIEAQIHGGGHEYGLRSGTLAT 238 (397)
Q Consensus 160 ~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (397)
.+||++|+.+++|+||+.|..++|..++++|++++|.||++||+|+|++|+++ ...-+..+.+.||+....++.||.++
T Consensus 205 ~icr~~~v~v~~DaAQavG~i~vDV~eln~D~~s~s~HK~ygp~~iGaLYvr~~~~~~~~~p~~~GGgq~r~~rsGT~~~ 284 (428)
T KOG1549|consen 205 KICREEGVQVHVDAAQAVGKIPVDVQELNADFLSISAHKIYGPPGIGALYVRRKRPRLRVEPPLSGGGQERGLRSGTVAT 284 (428)
T ss_pred HHhCcCCcEEEeehhhhcCCccccHHHcCchheeeecccccCCCcceEEEEccCCCcccccCcccCCccccccccCCcCc
Confidence 99999999999999999999999999999999999999999999999999997 33344567888999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCChHHHHHHhCCcEeccc
Q psy8850 239 HQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAIKDIAVSSG 318 (397)
Q Consensus 239 ~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g 318 (397)
+....+.+|.++....+......+.++-..+...+....+++.+.+.+....+.+.++.|+......+...++.+.++.|
T Consensus 285 ~~~~~~gsA~e~~~~~~~~~~~~~~~~~~~ll~~i~~~~~~~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~s~ 364 (428)
T KOG1549|consen 285 PLAVGLGSAAEFVNKEMAYDEAIIKRLSEKLLMGIGQSLPEVTLNGSGKSRYPGLVSLSFPYVEGESLLMDLKDVALSSG 364 (428)
T ss_pred hhhhhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHhhhCchhhccCCcccccccceeeecccccCcchhhhhhhhhhccc
Confidence 99999999999987765555666666777777777665688878888777778899999986667788888888999999
Q ss_pred CccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHHHhcCccchh
Q psy8850 319 SACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKLRELSPLWDM 382 (397)
Q Consensus 319 ~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~ 382 (397)
..|.....+|++.++..|.+....+.+|||+++.+++++|++++++.+.+.+..+++.+|.|-|
T Consensus 365 ~a~~~~~~epsy~l~~~G~~~~~~~~~iRis~G~y~t~~di~~~~~~i~~~v~~~~~~s~l~~~ 428 (428)
T KOG1549|consen 365 SACTSASLEPSYVLRAIGVDEDLAHSSIRISIGRYTTEEDIDYLVDAIKKLVSLLREMSPLWEM 428 (428)
T ss_pred chhhcCCCCcchhhhhcCcchhhhcceeEEeeeeeCcHHHHHHHHHHHHHHHHhccccCCCCCC
Confidence 9997767899999999999988999999999999999999999999999999999999999843
No 6
>PLN02651 cysteine desulfurase
Probab=100.00 E-value=2.7e-49 Score=368.75 Aligned_cols=360 Identities=62% Similarity=0.988 Sum_probs=323.2
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHh
Q psy8850 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAH 80 (397)
Q Consensus 1 ~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~ 80 (397)
||+++++++|+.+++++.+++...+++|++..+..++...+.++++++.+++++|++++++++++|+|+++++++.++..
T Consensus 3 ld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~~l~~~~~ 82 (364)
T PLN02651 3 LDMQATTPIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPKEIIFTSGATESNNLAIKGVMH 82 (364)
T ss_pred ccCcCCCCCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHH
Confidence 79999999999999999999987778887644555667778899999999999999888999999999999999887754
Q ss_pred hhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHH
Q psy8850 81 FYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGE 160 (397)
Q Consensus 81 ~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~ 160 (397)
...++|++|++++.+|+++...+..+...|.+++.++.++++.+|+++++++++++++++++++++|+||.+.|+++|.+
T Consensus 83 ~~~~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~t~lv~v~~~~n~tG~~~~l~~I~~ 162 (364)
T PLN02651 83 FYKDKKKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVKSDGLVDLDELAAAIRPDTALVSVMAVNNEIGVIQPVEEIGE 162 (364)
T ss_pred hccCCCCEEEEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhcCCCcEEEEEECCCCCceecccHHHHHH
Confidence 44467899999999999998888777666999999999888889999999999999999999999999999999999999
Q ss_pred HHHhcCcEEEEecccccCccccccCcccccEEEeccccccCCCCceEEEEecCCCCccccccccCCccccccCCCCchhH
Q psy8850 161 LCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQ 240 (397)
Q Consensus 161 l~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (397)
+||++|+++++|++|+.|..++++..+++|++++|+||++||.|+|+++++++....+.+...+++...+++.||+|...
T Consensus 163 ~~~~~g~~~~vD~a~~~g~~~~~~~~~~~D~~~~s~hK~~gp~G~g~l~v~~~~~~~l~p~~~g~~~~~~~~~GT~~~~~ 242 (364)
T PLN02651 163 LCREKKVLFHTDAAQAVGKIPVDVDDLGVDLMSISGHKIYGPKGVGALYVRRRPRVRLEPLMSGGGQERGRRSGTENTPL 242 (364)
T ss_pred HHHHcCCEEEEEcchhhCCcccCcccCCCCEEEechhhhCCCCceEEEEEcCCCCCCCCccccCCCccCCccCCCccHHH
Confidence 99999999999999999999999999999999999999989999999999998888888888777766778899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCC--CCCCceEEEEecCCChHHHHHHhCCcEeccc
Q psy8850 241 IVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMN--NRIPHNLNISFNFIEGESLLMAIKDIAVSSG 318 (397)
Q Consensus 241 ~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g 318 (397)
++++.++++++.++.+++.++..++.+++.+.|++.++++.+.++.. .+.++++.|.+++.++.++...|.+|.++.|
T Consensus 243 ~~~l~~al~~~~~~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~L~~i~v~~g 322 (364)
T PLN02651 243 VVGLGAACELAMKEMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLNLSFAYVEGESLLMGLKEVAVSSG 322 (364)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEEEEeCCCCHHHHHHHhCCEEEEch
Confidence 99999999999887888899999999999999986367999998632 3457788999988888899999988999999
Q ss_pred CccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHH
Q psy8850 319 SACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEID 360 (397)
Q Consensus 319 ~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~ 360 (397)
..|.+....++..++.+|.......+.+|+|++.++|++|||
T Consensus 323 ~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 323 SACTSASLEPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred hhcCCCCCCcCHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence 999998888899999999876666789999999999999985
No 7
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=100.00 E-value=1.1e-48 Score=367.27 Aligned_cols=372 Identities=47% Similarity=0.782 Sum_probs=326.8
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHh
Q psy8850 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAH 80 (397)
Q Consensus 1 ~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~ 80 (397)
||+++++++|+.|++++.+++....++|.. .+..+....+.++++++.+++++|+++++|++++|+|+++++++.++..
T Consensus 3 ld~aa~~~~~~~v~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~al~~~~~ 81 (379)
T TIGR03402 3 LDNNATTRVDPEVLEAMLPYFTEYFGNPSS-MHSFGGEVGKAVEEAREQVAKLLGAEPDEIIFTSGGTESDNTAIKSALA 81 (379)
T ss_pred CCCcCCCCCCHHHHHHHHHHHHhcCCCCCc-ccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHH
Confidence 799999999999999999999877788886 5666666778899999999999999988999999999999999987642
Q ss_pred hhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHH
Q psy8850 81 FYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGE 160 (397)
Q Consensus 81 ~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~ 160 (397)
.. .++++|+++..+|+++...+..+...|.+++.+|.+++|.+|+++++++++++++++++++++|+||.+.|+++|.+
T Consensus 82 ~~-~~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~g~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~~~~I~~ 160 (379)
T TIGR03402 82 AQ-PEKRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDEEGRLDLEELRAAITDDTALVSVMWANNETGTIFPIEEIGE 160 (379)
T ss_pred hc-CCCCeEEEcccccHHHHHHHHHHHHcCCEEEEEccCCCCcCCHHHHHHhcCCCcEEEEEEcccCCeeecccHHHHHH
Confidence 21 34689999999999998888877667999999999888889999999999999999999999999999999999999
Q ss_pred HHHhcCcEEEEecccccCccccccCcccccEEEeccccccCCCCceEEEEecCCCCccccccccCCccccccCCCCchhH
Q psy8850 161 LCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQ 240 (397)
Q Consensus 161 l~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (397)
+|+++|+++++|++|+.|..++++..+++|++++|+||++||.|+|+++++++. .+.+...++.....++.|+++...
T Consensus 161 l~~~~g~~vivD~~~~~g~~~~~~~~~~~D~~~~s~~K~~gp~G~g~l~v~~~~--~~~p~~~g~~~~~~~~~gt~~~~~ 238 (379)
T TIGR03402 161 IAKERGALFHTDAVQAVGKIPIDLKEMNIDMLSLSGHKLHGPKGVGALYIRKGT--RFRPLLRGGHQERGRRAGTENVPG 238 (379)
T ss_pred HHHHcCCEEEEECcccccccccCcccCCCCEEEEcHHHcCCCCceEEEEECCCC--CCCCcccCCccCCCcCCCCccHHH
Confidence 999999999999999999999999888999999999998899999999998764 345666555555567789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCChHHHHHHhC--CcEeccc
Q psy8850 241 IVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAIK--DIAVSSG 318 (397)
Q Consensus 241 ~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~i~~~~g 318 (397)
++++.+++++..++++...++..++++++++.|.+.++++.+.+++..+.++.+.+.++..++.++...|. ||.+..|
T Consensus 239 ~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~v~~g 318 (379)
T TIGR03402 239 IVGLGKAAELATEHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISFEYIEGEAILLLLDMEGICASSG 318 (379)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEEecCCCHHHHHHhhccCCEEEEch
Confidence 99999999999888888889999999999999984378888887654444667888888778888888876 9999999
Q ss_pred CccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHHHhc
Q psy8850 319 SACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKLREL 376 (397)
Q Consensus 319 ~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~ 376 (397)
..|.++...++..++.+|.......+.+|+|++.++|++|||++++.|+++++++++.
T Consensus 319 ~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~~~~~~~~~ 376 (379)
T TIGR03402 319 SACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPPIIARLRAM 376 (379)
T ss_pred hhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 9999987778889999998766667899999999999999999999999999887763
No 8
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=100.00 E-value=2.4e-47 Score=358.30 Aligned_cols=372 Identities=45% Similarity=0.699 Sum_probs=321.8
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCC-CCCcEEEeCChhHHHHHHHHHhH
Q psy8850 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYA-DPREIIWTSGATESNNLAIKGAA 79 (397)
Q Consensus 1 ~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~i~~~~g~t~a~~~~l~~l~ 79 (397)
||+++++++++.|++++.+++...++||++ .+.++......+.+.++.+.+.+++ ++++|++|+|+|+++++++.++.
T Consensus 3 ld~aa~~~~~~~v~~~~~~~~~~~~~n~~~-~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~t~g~teal~~~~~~~~ 81 (382)
T TIGR03403 3 LDNNATTMLDPKVKELMDPFFCDIYGNPNS-LHQFGTATHPAIAEALDKLYKGINARDLDDIIITSCATESNNWVLKGVY 81 (382)
T ss_pred ccCcCCCCCCHHHHHHHHHHHHhcCcCCcc-ccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHHHH
Confidence 799999999999999999999988889986 6666666666777777777877887 67899999999999999998764
Q ss_pred hh-h-ccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHH
Q psy8850 80 HF-Y-KKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILE 157 (397)
Q Consensus 80 ~~-~-~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~ 157 (397)
.. . ..++++|+++..+|+++...+..+...|.+++.+|.++++.+|+++++++++++++++++++++||||.+.|+++
T Consensus 82 ~~~~~~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~~~~ 161 (382)
T TIGR03403 82 FDEILKGGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPINEQGTITAEQVREAITEKTALVSVMWANNETGMIFPIKE 161 (382)
T ss_pred HhhcccCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCCCCCCCHHHHHHhcccCCeEEEEEcccCCCccccCHHH
Confidence 21 1 133578999999999999988777667999999999988889999999999999999999999999999999999
Q ss_pred HHHHHHhcCcEEEEecccccCccccccCcccccEEEeccccccCCCCceEEEEecCCCCccccccccCCccccccCCCCc
Q psy8850 158 IGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLA 237 (397)
Q Consensus 158 i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (397)
|.++|+++|+++++|++++.|..++++..+++|++++|+||++||.|+|++++++.. .+.+.+.++.....++.|+++
T Consensus 162 I~~la~~~g~~~ivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~gp~G~g~l~vr~~~--~~~p~~~g~~~~~~~~~gt~~ 239 (382)
T TIGR03403 162 IGEICKERGVLFHTDAVQAIGKIPVDVQKAGVDFLSFSAHKFHGPKGVGGLYIRKGV--ELTPLFHGGEHMGGRRSGTLN 239 (382)
T ss_pred HHHHHHHcCCEEEEechhhcCCCccCccccCCCEEEEcchhhCCCCceEEEEECCCC--CCCCcccCCCCCCCcccCCcC
Confidence 999999999999999999999888888888999999999999999999999998764 344555555444567789999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCChHHHHHHhC--CcEe
Q psy8850 238 THQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAIK--DIAV 315 (397)
Q Consensus 238 ~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~i~~ 315 (397)
...++++.+++++..+.++...+++.++++++.+.|++ ++++.+.++...+.++++.+.+++.+..++...|. ||.+
T Consensus 240 ~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~v 318 (382)
T TIGR03403 240 VPYIVAMGEAMRLANEYLDFEKSHVRRLRDRLEDALLE-LPDVFVVGDREHRVPNTILISIKGVEGEAMLWDLNKAGIAA 318 (382)
T ss_pred hHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhc-CCCEEEECCCCCCcCCEEEEEeCCCCHHHHHHhhccCCEEE
Confidence 99999999999988877888889999999999999998 89999887654455667788888778888887776 9999
Q ss_pred cccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHHHhc
Q psy8850 316 SSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKLREL 376 (397)
Q Consensus 316 ~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~ 376 (397)
+.|..|.+...+++.++..+|...+..++.||+|+..++|.+|||+++++|+++++++++.
T Consensus 319 ~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~~~~~~~~~ 379 (382)
T TIGR03403 319 STGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKKAVQRLRAI 379 (382)
T ss_pred EchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 9999998888888899999998766667899999999999999999999999999887753
No 9
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=100.00 E-value=1.5e-46 Score=355.39 Aligned_cols=357 Identities=22% Similarity=0.338 Sum_probs=305.8
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCC-CCCcEEEeCChhHHHHHHHHHhH
Q psy8850 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYA-DPREIIWTSGATESNNLAIKGAA 79 (397)
Q Consensus 1 ~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~i~~~~g~t~a~~~~l~~l~ 79 (397)
||+++++|+|+.|++++.+++...++|++++.+..+....+..+++|+.+++++++ ++++|++|+|+|++++.++.++.
T Consensus 27 ld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~~l~~~~~~~~ 106 (406)
T PRK09295 27 LDSAASAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSAEELVFVRGTTEGINLVANSWG 106 (406)
T ss_pred EeCcccccCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHHhh
Confidence 69999999999999999999987777876656666777788999999999999998 57789999999999999998753
Q ss_pred hhhccCCCEEEEcCCCChhhHHHHHHHh-hCCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHH
Q psy8850 80 HFYKKRGKHIITVQTEHKSVLDSIRKLE-NDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEI 158 (397)
Q Consensus 80 ~~~~~~g~~vl~~~~~~~s~~~~~~~~~-~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i 158 (397)
....++||+|++++++|++....+..+. ..|++++.++.++++.+|++++++++++++++|++++++||||.+.|+++|
T Consensus 107 ~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~t~lv~l~~~~n~tG~~~~~~~i 186 (406)
T PRK09295 107 NSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPALFDERTRLLAITHVSNVLGTENPLAEM 186 (406)
T ss_pred hhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCCCHHHHHHhcCCCcEEEEEecchhcccccCCHHHH
Confidence 2223788999999999999877776654 359999999998888899999999999999999999999999999999999
Q ss_pred HHHHHhcCcEEEEecccccCccccccCcccccEEEeccccccCCCCceEEEEecCCCCccccccccCCc-----------
Q psy8850 159 GELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGH----------- 227 (397)
Q Consensus 159 ~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~~~~~~~~~~----------- 227 (397)
.++|+++|+++++|++|+.|..++++..+++|++++|+||++||.|+|+++++++..+.+.+...++..
T Consensus 187 ~~~~~~~~~~vivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~gp~G~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 266 (406)
T PRK09295 187 IALAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGHKLYGPTGIGILYVKEALLQEMPPWEGGGSMIATVSLTEGTT 266 (406)
T ss_pred HHHHHHcCCEEEEEcccccCccccCchhcCCCEEEeehhhccCCCCcEEEEEchHhHhhCCCcccCCceeeeeecCCccc
Confidence 999999999999999999999988888889999999999988999999999998876666554333211
Q ss_pred ----cccccCCCCchhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCC
Q psy8850 228 ----EYGLRSGTLATHQIVGMGEAFRLARI-EMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIE 302 (397)
Q Consensus 228 ----~~~~~~~~~~~~~~~~l~~al~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (397)
..+++.|+++...++++.++++++.+ +++.+.++..++++++.+.|++ ++++.+.++. .+ .+++.+.+++.+
T Consensus 267 ~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~-~~~~~~~~~~-~~-~~iv~~~~~~~~ 343 (406)
T PRK09295 267 WAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQLES-VPDLTLYGPQ-NR-LGVIAFNLGKHH 343 (406)
T ss_pred cCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc-CCCEEEeCCC-CC-ceEEEEEECCcC
Confidence 14578899999999999999999876 7889999999999999999998 8899888753 22 467788887777
Q ss_pred hHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHH
Q psy8850 303 GESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVK 371 (397)
Q Consensus 303 ~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 371 (397)
..++...|. ||.++.|..|.. ..+..+|.. +.+|+|++.++|.+|||+++++|+++..
T Consensus 344 ~~~~~~~L~~~gI~v~~g~~c~~------~~~~~~~~~-----~~iRiS~~~ynt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 344 AYDVGSFLDNYGIAVRTGHHCAM------PLMAYYNVP-----AMCRASLAMYNTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred HHHHHHHHHhCCeEEeccccchH------HHHHHHCCC-----CEEEEEccCCCCHHHHHHHHHHHHHHHH
Confidence 777877776 899999988875 455555533 6899999999999999999999998754
No 10
>PRK02948 cysteine desulfurase; Provisional
Probab=100.00 E-value=7.7e-46 Score=348.13 Aligned_cols=369 Identities=36% Similarity=0.540 Sum_probs=314.0
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHh
Q psy8850 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAH 80 (397)
Q Consensus 1 ~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~ 80 (397)
||+++++++|+.+++++.+++...++++.+ .+..+......++++++.+++++|+++++|++++|+|+++..++.++..
T Consensus 4 ld~a~~~~~~~~v~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~~ 82 (381)
T PRK02948 4 LDYAATTPMSKEALQTYQKAASQYFGNESS-LHDIGGTASSLLQVCRKTFAEMIGGEEQGIYFTSGGTESNYLAIQSLLN 82 (381)
T ss_pred ccCCCCCCCCHHHHHHHHHHHHhcCCCCcc-ccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHH
Confidence 799999999999999999999887788876 7777777778899999999999999888999999999999999888764
Q ss_pred hhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHH
Q psy8850 81 FYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGE 160 (397)
Q Consensus 81 ~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~ 160 (397)
...++|++|+++..+|+++...+..+...|.+++.++.++++.+|++++++++++++++|++++++||||.+.|+++|.+
T Consensus 83 ~~~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~~~~I~~ 162 (381)
T PRK02948 83 ALPQNKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVDKSGLIRLVDLERAITPDTVLASIQHANSEIGTIQPIAEIGA 162 (381)
T ss_pred hccCCCCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeCCCCCCCHHHHHHhcCCCCEEEEEECCcCCcEeehhHHHHHH
Confidence 33356899999999999999988877777999999999888889999999999989999999999999999999999999
Q ss_pred HHHhcCcEEEEecccccCccccccCcccccEEEeccccccCCCCceEEEEecCCCCccccccccCCccccccCCCCchhH
Q psy8850 161 LCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQ 240 (397)
Q Consensus 161 l~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (397)
+|+++|+++++|+++++|..++++..+++|++++|+||++||.|+|+++++++. .+.+...++....+++.++++.+.
T Consensus 163 l~~~~~~~vivD~~~~~g~~~~~~~~~~~d~~~~s~~K~~gp~G~G~l~~~~~~--~~~~~~~~~~~~~~~~~~t~~~~~ 240 (381)
T PRK02948 163 LLKKYNVLFHSDCVQTFGKLPIDVFEMGIDSLSVSAHKIYGPKGVGAVYINPQV--RWKPVFPGTTHEKGFRPGTVNVPG 240 (381)
T ss_pred HHHHcCCEEEEEChhhccccccCcccCCCCEEEecHHhcCCCCcEEEEEEcCCC--CCCCcccCCCCCCCcCCCCccHHH
Confidence 999999999999999999888888888999999999998899999999998764 122223233334567789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-cEEEeCCCCCCCCceEEEEecCCChHHHHHHhC--CcEecc
Q psy8850 241 IVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIE-EIYINGDMNNRIPHNLNISFNFIEGESLLMAIK--DIAVSS 317 (397)
Q Consensus 241 ~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~i~~~~ 317 (397)
++++.++++...+++++..+++.++++++.+.|++ ++ .+...+......+.++.+.+++.+..++...|. ||.++.
T Consensus 241 ~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~v~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~gI~v~~ 319 (381)
T PRK02948 241 IAAFLTAAENILKNMQEESLRFKELRSYFLEQIQT-LPLPIEVEGHSTSCLPHIIGVTIKGIEGQYTMLECNRRGIAIST 319 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCEEEeCCCccCcCCEEEEEeCCCCHHHHHHhcccCCEEEEc
Confidence 99999999988778888999999999999999998 53 222222223344556667777667777777765 999999
Q ss_pred cCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHH
Q psy8850 318 GSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 318 g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 373 (397)
|..|..+..+|+..++++|...+...+++|||++.++|++|+|++++.|+++++++
T Consensus 320 g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~ 375 (381)
T PRK02948 320 GSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETIGNQF 375 (381)
T ss_pred hHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 99998877778899999997554556899999999999999999999999987654
No 11
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=100.00 E-value=5.5e-46 Score=351.36 Aligned_cols=358 Identities=23% Similarity=0.346 Sum_probs=304.5
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCC-CCCcEEEeCChhHHHHHHHHHhH
Q psy8850 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYA-DPREIIWTSGATESNNLAIKGAA 79 (397)
Q Consensus 1 ~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~i~~~~g~t~a~~~~l~~l~ 79 (397)
||+++++++|+.+.+++.+++....++++++.+..+....+.++++++.+++++|+ ++++|++++|+|+++++++.++.
T Consensus 23 ld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~~~~~t~~i~~~~~~~~ 102 (401)
T PRK10874 23 LDSAATALKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDAKNIVWTRGTTESINLVAQSYA 102 (401)
T ss_pred EeCCcccCCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHhh
Confidence 79999999999999999999988778877656666777888999999999999999 77899999999999999999874
Q ss_pred hhhccCCCEEEEcCCCChhhHHHHHHH-hhCCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHH
Q psy8850 80 HFYKKRGKHIITVQTEHKSVLDSIRKL-ENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEI 158 (397)
Q Consensus 80 ~~~~~~g~~vl~~~~~~~s~~~~~~~~-~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i 158 (397)
....++|++|++++++|++....+..+ ...|.+++.+|.+.++.+|+++++++++++|++|++++++|+||.+.|+++|
T Consensus 103 ~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~t~lv~i~~~~n~tG~~~~~~~i 182 (401)
T PRK10874 103 RPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGADRLPDVDLLPELITPRTRILALGQMSNVTGGCPDLARA 182 (401)
T ss_pred hccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCCCCcCCHHHHHHhcCcCcEEEEEeCCcccccCcCCHHHH
Confidence 211168899999999999987666654 3449999999998888899999999999999999999999999999999999
Q ss_pred HHHHHhcCcEEEEecccccCccccccCcccccEEEeccccccCCCCceEEEEecCCCCccccccccCC------------
Q psy8850 159 GELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGG------------ 226 (397)
Q Consensus 159 ~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~~~~~~~~~------------ 226 (397)
.++|+++|+++++|++|+.+..++++..+++|++++|+||++||.|+|+++++++..+.+.+...++.
T Consensus 183 ~~l~~~~g~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (401)
T PRK10874 183 ITLAHQAGMVVMVDGAQGAVHFPADVQALDIDFYAFSGHKLYGPTGIGVLYGKSELLEAMSPWQGGGKMLTEVSFDGFTP 262 (401)
T ss_pred HHHHHHcCCEEEEECCcccccccCCchhcCCCEEEEecccccCCCccEEEEEchHHHhcCCCeecCCcceEeeccCccCC
Confidence 99999999999999999988888888778899999999998899999999999887777665442221
Q ss_pred --ccccccCCCCchhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCCh
Q psy8850 227 --HEYGLRSGTLATHQIVGMGEAFRLARI-EMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEG 303 (397)
Q Consensus 227 --~~~~~~~~~~~~~~~~~l~~al~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (397)
...+++.|++|+..++++.++++++.+ ++.+..++..++++++.+.|++ ++++.+..++. ..++.+.+++.+.
T Consensus 263 ~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l~~~l~~~l~~-~~g~~~~~~~~---~~i~~~~~~~~~~ 338 (401)
T PRK10874 263 QSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSRSLATLAEDALAK-LPGFRSFRCQD---SSLLAFDFAGVHH 338 (401)
T ss_pred CCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc-CCCEEEeCCCC---CcEEEEEECCcCH
Confidence 124677899999999999999998754 5777889999999999999998 88988776543 4567777777777
Q ss_pred HHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHH
Q psy8850 304 ESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 304 ~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 373 (397)
.++.+.|. ||.+..|..|.. ..+..+|.. ++||+|++.++|++|||+++++|+++++.+
T Consensus 339 ~~~~~~L~~~gI~v~~g~~~~~------~~~~~~g~~-----~~iRiS~~~~nt~edid~ll~al~~~~~~~ 399 (401)
T PRK10874 339 SDLVTLLAEYGIALRAGQHCAQ------PLLAALGVT-----GTLRASFAPYNTQSDVDALVNAVDRALELL 399 (401)
T ss_pred HHHHHHHHHCCcEEeccccchH------HHHHHhCCC-----CEEEEEecccCCHHHHHHHHHHHHHHHHHh
Confidence 78877776 999999887764 445555543 789999999999999999999999987754
No 12
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=100.00 E-value=7.9e-46 Score=352.23 Aligned_cols=363 Identities=26% Similarity=0.333 Sum_probs=309.1
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCC-CCcEEEeCChhHHHHHHHHHhH
Q psy8850 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYAD-PREIIWTSGATESNNLAIKGAA 79 (397)
Q Consensus 1 ~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~-~~~i~~~~g~t~a~~~~l~~l~ 79 (397)
||+++++++|+.|++++.+++.....++.++.+..+....+.+.++++.++++++++ +++|++++|+|++++.++.++.
T Consensus 36 Ld~a~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~al~~i~~~~~ 115 (424)
T PLN02855 36 LDNAATSQKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINASTSREIVFTRNATEAINLVAYTWG 115 (424)
T ss_pred eeCccccCCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCHHHHHHHHHHHhh
Confidence 799999999999999999999887777766455555566678899999999999995 5789999999999999988652
Q ss_pred hhhccCCCEEEEcCCCChhhHHHHHHHh-hCCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHH
Q psy8850 80 HFYKKRGKHIITVQTEHKSVLDSIRKLE-NDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEI 158 (397)
Q Consensus 80 ~~~~~~g~~vl~~~~~~~s~~~~~~~~~-~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i 158 (397)
....++|++|++++++|++....+..+. ..|.+++.++.+.++.+|++++++.+++++++|++++++|+||.+.|+++|
T Consensus 116 ~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~~~~~~~~l~~~i~~~t~lv~i~~~~n~tG~~~~~~~I 195 (424)
T PLN02855 116 LANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPDEVLDVEQLKELLSEKTKLVATHHVSNVLGSILPVEDI 195 (424)
T ss_pred hhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCCCCcCHHHHHHHhccCceEEEEeCccccccccCCHHHH
Confidence 2112688999999999999887777654 349999999998777799999999999999999999999999999999999
Q ss_pred HHHHHhcCcEEEEecccccCccccccCcccccEEEeccccccCCCCceEEEEecCCCCccccccccCCc-----------
Q psy8850 159 GELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGH----------- 227 (397)
Q Consensus 159 ~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~~~~~~~~~~----------- 227 (397)
+++|+++|+++++|++|+.|..++++..+++|++++|+||++||.|+|+++++++..+.+.+...++..
T Consensus 196 ~~l~~~~g~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~ 275 (424)
T PLN02855 196 VHWAHAVGAKVLVDACQSVPHMPVDVQTLGADFLVASSHKMCGPTGIGFLWGKSDLLESMPPFLGGGEMISDVFLDHSTY 275 (424)
T ss_pred HHHHHHcCCEEEEEhhhhcCCcCCCchhcCCCEEEeecccccCCCccEEEEEchhhhhcCCCEecCCCceeeeecCcccc
Confidence 999999999999999999998888888888999999999988999999999998887777665444321
Q ss_pred ---cccccCCCCchhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCC---CCCCceEEEEecC
Q psy8850 228 ---EYGLRSGTLATHQIVGMGEAFRLARI-EMKEELKRILFLQKRLYNGLMESIEEIYINGDMN---NRIPHNLNISFNF 300 (397)
Q Consensus 228 ---~~~~~~~~~~~~~~~~l~~al~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 300 (397)
..+++.||++...++++.++++++.+ +++++.++..++++++++.|++ ++++.++++.. ....+++.|.+++
T Consensus 276 ~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~-~~g~~i~~~~~~~~~~r~~~v~~~~~~ 354 (424)
T PLN02855 276 APPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVELGTYLYEKLSS-VPGVRIYGPKPSEGVGRAALCAFNVEG 354 (424)
T ss_pred CCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc-CCCEEEeCCCcccccCcccEEEEEECC
Confidence 34578899999999999999998866 7999999999999999999998 88999887542 2235688888887
Q ss_pred CChHHHHHHhC---CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHHHh
Q psy8850 301 IEGESLLMAIK---DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKLRE 375 (397)
Q Consensus 301 ~~~~~~~~~l~---~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 375 (397)
.+..++...|. +|.++.|.+|.+ ...+.+|.. ..+|+|++.++|.+|||+++++|+++++.+++
T Consensus 355 ~~~~~v~~~L~~~~gI~v~~g~~c~~------~~~~~~g~~-----~~iRiS~~~ynt~~di~~l~~~l~~~~~~~~~ 421 (424)
T PLN02855 355 IHPTDLSTFLDQQHGVAIRSGHHCAQ------PLHRYLGVN-----ASARASLYFYNTKEEVDAFIHALKDTIAFFSS 421 (424)
T ss_pred cCHHHHHHHhcccCCEEEechhhhhH------HHHHHhCCC-----CeEEEEeccCCCHHHHHHHHHHHHHHHHHHHh
Confidence 77788888884 899999888764 334555544 68999999999999999999999999988765
No 13
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=100.00 E-value=4.7e-46 Score=351.45 Aligned_cols=358 Identities=23% Similarity=0.320 Sum_probs=302.5
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCC-CCcEEEeCChhHHHHHHHHHhH
Q psy8850 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYAD-PREIIWTSGATESNNLAIKGAA 79 (397)
Q Consensus 1 ~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~-~~~i~~~~g~t~a~~~~l~~l~ 79 (397)
||+++++++|+.+++++.+++....+++++..+..+....+.++++|+.+++++|++ +++|++|+|+|+++++++.++.
T Consensus 20 ld~a~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~t~g~t~~l~~~~~~~~ 99 (398)
T TIGR03392 20 LDSAATALKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDAENIVWTRGTTESINLVAQSYA 99 (398)
T ss_pred eeCccccCCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChHHHHHHHHHHhh
Confidence 799999999999999999999876778876456666677788999999999999994 7889999999999999999874
Q ss_pred hhhccCCCEEEEcCCCChhhHHHHHHH-hhCCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHH
Q psy8850 80 HFYKKRGKHIITVQTEHKSVLDSIRKL-ENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEI 158 (397)
Q Consensus 80 ~~~~~~g~~vl~~~~~~~s~~~~~~~~-~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i 158 (397)
....++||+|++++++|++....+..+ ...|.+++.+|.+.++.+|++++++++++++++|++++++||||.+.|+++|
T Consensus 100 ~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~i~~~t~lv~i~~~~n~tG~~~~~~~i 179 (398)
T TIGR03392 100 RPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGADLLPDIRQLPELLTPRTRILALGQMSNVTGGCPDLARA 179 (398)
T ss_pred hccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHHhccCceEEEEECccccccccCCHHHH
Confidence 211168899999999999976665544 4459999999998878899999999999999999999999999999999999
Q ss_pred HHHHHhcCcEEEEecccccCccccccCcccccEEEeccccccCCCCceEEEEecCCCCccccccccCC------------
Q psy8850 159 GELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGG------------ 226 (397)
Q Consensus 159 ~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~~~~~~~~~------------ 226 (397)
.++|+++|+++++|++|+.+..++++..+++|++++|+||++||.|+|+++++++....+.+...++.
T Consensus 180 ~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~d~~~~s~~K~~gp~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (398)
T TIGR03392 180 ITLAHQYGAVVVVDGAQGVVHGPPDVQALDIDFYAFSGHKLYGPTGIGVLYGKTELLEAMPPWQGGGKMLSHVSFDGFIP 259 (398)
T ss_pred HHHHHHcCCEEEEEhhhhcCCCCCChhhcCCCEEEEecccccCCCceEEEEEcHHHHhhCCCeecCCceEeecccccccc
Confidence 99999999999999999988888888777899999999998899899999999887766655432221
Q ss_pred --ccccccCCCCchhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCCh
Q psy8850 227 --HEYGLRSGTLATHQIVGMGEAFRLARI-EMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEG 303 (397)
Q Consensus 227 --~~~~~~~~~~~~~~~~~l~~al~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (397)
...+++.|+++...++++.++++++.+ ++.++.++..++++++.+.|++ ++++.+...+. ..++.+.+++.+.
T Consensus 260 ~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l~~~l~~~l~~-l~g~~~~~~~~---~~i~~~~~~~~~~ 335 (398)
T TIGR03392 260 QAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLADLAEERLAQ-LPGFRSFRCPG---SSLLAFDFAGVHH 335 (398)
T ss_pred CCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc-CCCeEEeCCCC---CcEEEEEeCCcCH
Confidence 124678899999999999999998855 5778889999999999999998 88888775443 4577777777777
Q ss_pred HHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHH
Q psy8850 304 ESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 304 ~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 373 (397)
.++...|. ||.+..|..|.. ..+..+|.. ++||+|++.++|.+||++++++|+++++.+
T Consensus 336 ~~l~~~L~~~gI~v~~g~~~~~------~~~~~~g~~-----~~iRvS~~~~~t~~ei~~l~~~l~~~~~~~ 396 (398)
T TIGR03392 336 SDLAALLAESGIALRAGQHCAQ------PLMAALGVS-----GTLRASFAPYNTQQDVDALVDAVGAALELL 396 (398)
T ss_pred HHHHHHHHhCCEEEecCccchH------HHHHHhCCC-----CEEEEEeeccCCHHHHHHHHHHHHHHHHHh
Confidence 78888876 999999987764 445555533 789999999999999999999999987754
No 14
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=100.00 E-value=3.3e-44 Score=339.70 Aligned_cols=361 Identities=27% Similarity=0.389 Sum_probs=302.1
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCC-CCcEEEeCChhHHHHHHHHHhH
Q psy8850 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYAD-PREIIWTSGATESNNLAIKGAA 79 (397)
Q Consensus 1 ~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~-~~~i~~~~g~t~a~~~~l~~l~ 79 (397)
||+++.+++|+.+.+++.+++...+++++.+.+..+....+..+++++.+++++|++ +++|++++|+|+++.+++.++.
T Consensus 22 ld~~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l~~~~~~~~ 101 (403)
T TIGR01979 22 LDSAATSQKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASDEEIVFTRGTTESINLVAYSWG 101 (403)
T ss_pred EeCccccCCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHHhh
Confidence 699999999999999999998877778776455556666778999999999999998 6789999999999999988764
Q ss_pred hhhccCCCEEEEcCCCChhhHHHHHHHh-hCCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHH
Q psy8850 80 HFYKKRGKHIITVQTEHKSVLDSIRKLE-NDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEI 158 (397)
Q Consensus 80 ~~~~~~g~~vl~~~~~~~s~~~~~~~~~-~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i 158 (397)
....++|++|++++++|++....+..+. ..|.+++.++.++++.+|++++++++++++++|++++++|+||.+.|+++|
T Consensus 102 ~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~~~~lv~~~~~~~~tG~~~~~~~i 181 (403)
T TIGR01979 102 DSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLDDDGTLDLDDLEKLLTEKTKLVAITHVSNVLGTVNPVEEI 181 (403)
T ss_pred hhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecCCCCCCCHHHHHHHhccCCeEEEEEcccccccccCCHHHH
Confidence 2222689999999999999887776554 349999999999888899999999999999999999999999999999999
Q ss_pred HHHHHhcCcEEEEecccccCccccccCcccccEEEeccccccCCCCceEEEEecCCCCccccccccCCc-----------
Q psy8850 159 GELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGH----------- 227 (397)
Q Consensus 159 ~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~~~~~~~~~~----------- 227 (397)
.++|+++|+++++|++|+.+..++++..+++|++++|+||++||.|+|+++++++....+.+...++..
T Consensus 182 ~~~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~G~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 261 (403)
T TIGR01979 182 AKLAHQVGAKVLVDGAQAVPHMPVDVQALDCDFYVFSGHKMYGPTGIGVLYGKEELLEQMPPFLGGGEMIAEVSFEETTY 261 (403)
T ss_pred HHHHHHcCCEEEEEchhhcCccccCccccCCCEEEEecccccCCCCceEEEEchHHHhcCCCeecCCCceeecccCcccc
Confidence 999999999999999999998888888788999999999988998999999998776666554433311
Q ss_pred ---cccccCCCCchhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCC-CCCceEEEEecCCC
Q psy8850 228 ---EYGLRSGTLATHQIVGMGEAFRLARI-EMKEELKRILFLQKRLYNGLMESIEEIYINGDMNN-RIPHNLNISFNFIE 302 (397)
Q Consensus 228 ---~~~~~~~~~~~~~~~~l~~al~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 302 (397)
..+++.|+++...++++.++++++.+ +++++.++..++++++++.|++ ++++.+..+... ..++++.+.+++.+
T Consensus 262 ~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~-~~g~~~~~~~~~~~~~~~v~~~~~~~~ 340 (403)
T TIGR01979 262 NEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAYALERLGE-IPGLRIYGPRDAEDRGGIISFNVEGVH 340 (403)
T ss_pred CCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc-CCCEEEeCCCCccccCceEEEEeCCcC
Confidence 13456789999999999999998865 6888999999999999999998 889988865432 33567778887767
Q ss_pred hHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHH
Q psy8850 303 GESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 303 ~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 373 (397)
..++.+.|. ||.+..|..|.. ..+..+|. ++++|||++.+++.+||++++++|+++++.+
T Consensus 341 ~~~~~~~L~~~gI~v~~g~~~~~------~~~~~~~~-----~~~iRiS~~~~~t~~di~~l~~~l~~~~~~~ 402 (403)
T TIGR01979 341 PHDVGTILDEEGIAVRSGHHCAQ------PLMRRFGV-----PATCRASFYIYNTEEDIDALVEALKKVRKFF 402 (403)
T ss_pred HHHHHHHHhhCCEEEcchhhhhH------HHHHHhCC-----CCEEEEEeccCCCHHHHHHHHHHHHHHHHHh
Confidence 778877776 899988876653 33444442 3789999999999999999999999887654
No 15
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=100.00 E-value=4.6e-44 Score=332.66 Aligned_cols=348 Identities=49% Similarity=0.770 Sum_probs=303.2
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHh
Q psy8850 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAH 80 (397)
Q Consensus 1 ~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~ 80 (397)
||+++.+++|+.+++++.+++...+++|+...+..+....+.++++++.+++++++++++|++++|+|+|++.++.++..
T Consensus 2 ld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~ 81 (353)
T TIGR03235 2 LDHNATTPIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALGADTEEVIFTSGATESNNLAILGLAR 81 (353)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHH
Confidence 79999999999999999999876667776534444555567789999999999999988999999999999999988763
Q ss_pred hhccCC-CEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHH
Q psy8850 81 FYKKRG-KHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIG 159 (397)
Q Consensus 81 ~~~~~g-~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~ 159 (397)
...++| ++|+++..+|+++...+..+...|.+++.++.++++.+|++++++++++++++|++++++||||.+.|+++|.
T Consensus 82 ~~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~~~~I~ 161 (353)
T TIGR03235 82 AGEQKGKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVDESGRIDVDELADAIRPDTLLVSIMHVNNETGSIQPIREIA 161 (353)
T ss_pred hcccCCCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhCCCCCEEEEEEcccCCceeccCHHHHH
Confidence 221244 8899999999999998887766799999999988888999999999999999999999999999999999999
Q ss_pred HHHHhcCcEEEEecccccCccccccCcccccEEEeccccccCCCCceEEEEecCCCC--ccccccccCCccccccCCCCc
Q psy8850 160 ELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRT--RIEAQIHGGGHEYGLRSGTLA 237 (397)
Q Consensus 160 ~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 237 (397)
++|+++|+++++|+++++|..++++..+++|++++|+||++||.|+|+++++++... .+.+...++....+++.++++
T Consensus 162 ~l~~~~~~~~ivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~gp~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 241 (353)
T TIGR03235 162 EVLEAHEAFFHVDAAQVVGKITVDLSADRIDLISCSGHKIYGPKGIGALVIRKRGKPKAPLKPIMFGGGQERGLRPGTLP 241 (353)
T ss_pred HHHHHcCCEEEEEchhhcCCccccccccCCCEEEeehhhcCCCCceEEEEEccCcccccccCceeeCCCCcCccccCCCC
Confidence 999999999999999999999999888899999999999889999999999987543 245555655555678889999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCChHHHHHHhC-CcEec
Q psy8850 238 THQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAIK-DIAVS 316 (397)
Q Consensus 238 ~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~i~~~ 316 (397)
...++++.++++++.++.+++.+++.++++++++.|++ +++.+..++....+.++.+.+++.+..++...|. +|.+.
T Consensus 242 ~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~--~g~~~~~~~~~~~~~i~~~~~~~~~~~~v~~~L~~~i~v~ 319 (353)
T TIGR03235 242 VHLIVGMGEAAEIARRNAQAWEVKLRAMRNQLRDALQT--LGVKLNGDPAETIPHILNFSIDGVNSEALIVNLRADAAVS 319 (353)
T ss_pred hHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc--CCeEEeCCcccccCCEEEEEeCCcCHHHHHHHHhCCeEEE
Confidence 99999999999998878889999999999999999988 7888886655555677888888778888888887 89999
Q ss_pred ccCccCCCCCChhhHHHhhCCCccccCceEEEee
Q psy8850 317 SGSACTSASLEPSYVLRALGCNDELAHSSIRFTI 350 (397)
Q Consensus 317 ~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~ 350 (397)
+|..|..+...++.++.++|.+....++.+|+|+
T Consensus 320 ~g~~~~~~~~~~~~~l~~~g~~~~~~~~~~r~s~ 353 (353)
T TIGR03235 320 TGSACSSSKYEPSHVLQAMGLDTDRARGAIRFSW 353 (353)
T ss_pred chhhcCCCCCCCCHHHHHcCCCHHHhCccEEEeC
Confidence 9999998888888999999999877889999985
No 16
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=100.00 E-value=1.3e-44 Score=338.42 Aligned_cols=349 Identities=30% Similarity=0.457 Sum_probs=300.5
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCC-CcEEEeCChhHHHHHHHHHhH
Q psy8850 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADP-REIIWTSGATESNNLAIKGAA 79 (397)
Q Consensus 1 ~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~-~~i~~~~g~t~a~~~~l~~l~ 79 (397)
||+++++++|+.|++++.+.+....++|++..+..+....+.++++++.+++++|+++ ++|+|++|+|.|++.++.++.
T Consensus 3 ld~~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~l~ 82 (371)
T PF00266_consen 3 LDNAGTGPMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASSLL 82 (371)
T ss_dssp EBTSSS-B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHHHH
T ss_pred eeCCCccCCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccccccccccccchhhhhhhhccc
Confidence 6999999999999999999999988898765677777788999999999999999998 789999999999999999984
Q ss_pred hhhccCCCEEEEcCCCChhhHHHHHHHh-hCCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHH
Q psy8850 80 HFYKKRGKHIITVQTEHKSVLDSIRKLE-NDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEI 158 (397)
Q Consensus 80 ~~~~~~g~~vl~~~~~~~s~~~~~~~~~-~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i 158 (397)
... ++|++|++++.+|++....+..+. +.|.+++.++.+.++.+|++++++++++++++|++++.+|.+|.+.|+++|
T Consensus 83 ~~~-~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~~~~~~~~~~~~l~~~~~lv~~~~~~~~tG~~~pi~~I 161 (371)
T PF00266_consen 83 NPL-KPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPGGSLDLEDLEEALNPDTRLVSISHVENSTGVRNPIEEI 161 (371)
T ss_dssp HHG-TTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTTSSCSHHHHHHHHHTTESEEEEESBETTTTBBSSHHHH
T ss_pred ccc-ccccccccccccccccccccccccccchhhhccccccccchhhhhhhhhhhccccceEEeecccccccEEeeecee
Confidence 221 788999999999999998888876 569999999998888999999999999999999999999999999999999
Q ss_pred HHHHHhcCcEEEEecccccCccccccCcccccEEEeccccccCCCCceEEEEecCCCCccccccccCC------------
Q psy8850 159 GELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGG------------ 226 (397)
Q Consensus 159 ~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~~~~~~~~~------------ 226 (397)
.++||++|+++++|+++++|..++|+..+++|++++|+||++||.|+|+++++++..+++++...++.
T Consensus 162 ~~~~~~~~~~~~vD~~~~~g~~~id~~~~~~D~~~~s~~Kl~gp~G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 241 (371)
T PF00266_consen 162 AKLAHEYGALLVVDAAQSAGCVPIDLDELGADFLVFSSHKLGGPPGLGFLYVRPEAIERLRPAKPGGGYLDFPSLQEYGL 241 (371)
T ss_dssp HHHHHHTTSEEEEE-TTTTTTSS--TTTTTESEEEEESTSTTSSSTEEEEEEEHHHHHHHHTSSSSSSTTTHHHHHHHCH
T ss_pred hhhhhccCCceeEechhccccccccccccccceeeecccccCCCCchhhheehhhhhhccccccccccccccccchhccc
Confidence 99999999999999999999999999999999999999998899999999999988777766666554
Q ss_pred --ccccccCCCCchhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCC-CCCCCCceEEEEecCCC
Q psy8850 227 --HEYGLRSGTLATHQIVGMGEAFRLARI-EMKEELKRILFLQKRLYNGLMESIEEIYINGD-MNNRIPHNLNISFNFIE 302 (397)
Q Consensus 227 --~~~~~~~~~~~~~~~~~l~~al~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 302 (397)
...+++.||+++..++++..+++++.+ +++++.++..++.+++.+.|.+ ++++.++++ .....+.++.+.+++.+
T Consensus 242 ~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~ 320 (371)
T PF00266_consen 242 ADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEE-LPGIEVLGPDDEPRRPSIVSFNLPGSD 320 (371)
T ss_dssp HSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTTEEESSSSCGGBGTTEEEEEETTSS
T ss_pred ccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhc-CCceeEeeecccccccceEEEeecCCC
Confidence 123567889999999999999999954 7999999999999999999999 999988763 44556788899998888
Q ss_pred hHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHH
Q psy8850 303 GESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFT 362 (397)
Q Consensus 303 ~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~ 362 (397)
..++...|. +|.+..|..|.. ..+...+.. +.||+|++.++|.+|||++
T Consensus 321 ~~~~~~~L~~~~I~~~~G~~~~~------~~~~~~~~~-----~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 321 ADDVVKYLEERGIAVSTGSACAG------PSLDILGMG-----GVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp HHHHHHHHHHHTEEEEESTTTCH------HHHHHHHTT-----TEEEEE-GTTSSHHHHHHH
T ss_pred HHHHHHHHhhcCEEEeccCcccH------HHHHHhCCC-----CEEEEeccCCCCHHHHhhC
Confidence 888888887 899999887762 233333333 8999999999999999986
No 17
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=100.00 E-value=1.9e-42 Score=324.57 Aligned_cols=352 Identities=30% Similarity=0.451 Sum_probs=295.0
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCC-CCcEEEeCChhHHHHHHHHHhH
Q psy8850 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYAD-PREIIWTSGATESNNLAIKGAA 79 (397)
Q Consensus 1 ~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~-~~~i~~~~g~t~a~~~~l~~l~ 79 (397)
||+++.+++|+.+++++.+++...+.+|+++.+..+....+...++++.++++++++ ++++++++|+|+|+++++.++.
T Consensus 3 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~ 82 (373)
T cd06453 3 LDNAATSQKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLG 82 (373)
T ss_pred ccCccccCCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhh
Confidence 799999999999999999999887888877566777778889999999999999998 7789999999999999999887
Q ss_pred hhhccCCCEEEEcCCCChhhHHHHHHHh-hCCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHH
Q psy8850 80 HFYKKRGKHIITVQTEHKSVLDSIRKLE-NDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEI 158 (397)
Q Consensus 80 ~~~~~~g~~vl~~~~~~~s~~~~~~~~~-~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i 158 (397)
... .+|++|++++++|++....+..+. ..|.+++.++.+.++.+|++++++++.+++++|++++++||||.+.|+++|
T Consensus 83 ~~~-~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~~~~~i 161 (373)
T cd06453 83 RAN-KPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDDDGQLDLEALEKLLTERTKLVAVTHVSNVLGTINPVKEI 161 (373)
T ss_pred hcC-CCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecCCCCCcCHHHHHHHhcCCceEEEEeCcccccCCcCCHHHH
Confidence 200 178999999999999876665554 449999999999888899999999999999999999999999999999999
Q ss_pred HHHHHhcCcEEEEecccccCccccccCcccccEEEeccccccCCCCceEEEEecCCCCccccccccCCc-----------
Q psy8850 159 GELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGH----------- 227 (397)
Q Consensus 159 ~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~~~~~~~~~~----------- 227 (397)
+++|+++|++|++|++++.+..++++..+++|++++|+||++++.|+|+++++++....+.+...++..
T Consensus 162 ~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~g~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 241 (373)
T cd06453 162 GEIAHEAGVPVLVDGAQSAGHMPVDVQDLGCDFLAFSGHKMLGPTGIGVLYGKEELLEEMPPYGGGGEMIEEVSFEETTY 241 (373)
T ss_pred HHHHHHcCCEEEEEhhhhcCceeeeccccCCCEEEeccccccCCCCcEEEEEchHHhhcCCCeecCCCcccccccccccc
Confidence 999999999999999999888888777778999999999966657899999998877777665443321
Q ss_pred ---cccccCCCCchhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCCh
Q psy8850 228 ---EYGLRSGTLATHQIVGMGEAFRLARI-EMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEG 303 (397)
Q Consensus 228 ---~~~~~~~~~~~~~~~~l~~al~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (397)
..++..++++...++++.++++++.+ +++++.++..++++++++.|.+ ++++.+..++... ..++.+.+++.+.
T Consensus 242 ~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~ 319 (373)
T cd06453 242 ADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSE-IPGVRVYGDAEDR-AGVVSFNLEGIHP 319 (373)
T ss_pred CCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhc-CCCeEEeCCcccc-CCeEEEEECCcCH
Confidence 12355678888899999999998865 6888899999999999999999 8888887543322 5677888877677
Q ss_pred HHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHH
Q psy8850 304 ESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLL 366 (397)
Q Consensus 304 ~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l 366 (397)
.++.+.|. |+.+..|..|.+ ..++..|. +++||++++.++|.+|+|+++++|
T Consensus 320 ~~i~~~l~~~gi~i~~g~~~~~------~~~~~~~~-----~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 320 HDVATILDQYGIAVRAGHHCAQ------PLMRRLGV-----PGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred HHHHHHHHHCCEEeccCccchh------HHHHHhCC-----CCeEEEEecCCCCHHHHHHHHhhC
Confidence 88888876 898888876654 34444432 378999999999999999999875
No 18
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=100.00 E-value=3.8e-40 Score=309.42 Aligned_cols=352 Identities=32% Similarity=0.524 Sum_probs=288.0
Q ss_pred CCCCCCC-CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCC-CcEEEeCChhHHHHHHHHHh
Q psy8850 1 MDYSATT-PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADP-REIIWTSGATESNNLAIKGA 78 (397)
Q Consensus 1 ~~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~-~~i~~~~g~t~a~~~~l~~l 78 (397)
||+++.+ ++|+.+++++.+.+....+++....+.......+...++++.++++++++. ++|++++|+++++.+++.++
T Consensus 3 ld~a~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~ 82 (376)
T TIGR01977 3 FDNAATTYPKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALKGL 82 (376)
T ss_pred ccCcccCCCCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHhc
Confidence 6888876 788999999999988754455432333333345788899999999999864 47999999999999999987
Q ss_pred HhhhccCCCEEEEcCCCChhhHHHHHHHhhC-CcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHH
Q psy8850 79 AHFYKKRGKHIITVQTEHKSVLDSIRKLEND-GFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILE 157 (397)
Q Consensus 79 ~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~-g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~ 157 (397)
. ++|++|+++.++|+++...+..+... |.+++.++.+.++.+|+++++++++++++++++++++||||.+.|+++
T Consensus 83 ~----~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~~v~~~~~~n~tG~~~~~~~ 158 (376)
T TIGR01977 83 L----KEGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCDNEGLISPERIKRAIKTNTKLIVVSHASNVTGTILPIEE 158 (376)
T ss_pred c----CCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHhcCCCCeEEEEECCCCCccccCCHHH
Confidence 6 78999999999999998777655443 999999998888889999999999999999999999999999999999
Q ss_pred HHHHHHhcCcEEEEecccccCccccccCcccccEEEecccc-ccCCCCceEEEEecCCCCccccccccCC----------
Q psy8850 158 IGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEAQIHGGG---------- 226 (397)
Q Consensus 158 i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~~s~~K-~~g~~g~g~~~~~~~~~~~~~~~~~~~~---------- 226 (397)
|.++|+++|+++|+|+++++|..++++...++|++++|+|| ++||.|+|+++++++. .+.+...++.
T Consensus 159 i~~l~~~~~~~livD~a~~~g~~~~~~~~~~~D~~~~s~~K~l~~p~g~g~l~~~~~~--~~~~~~~~~~~~~~~~~~~~ 236 (376)
T TIGR01977 159 IGELAQENGIFFILDAAQTAGVIPIDMTELAIDMLAFTGHKGLLGPQGTGGLYIREGI--KLKPLKSGGTGSHSALIDQP 236 (376)
T ss_pred HHHHHHHcCCEEEEEhhhccCccCCCchhcCCCEEEecccccccCCCCceEEEEcCCc--CcCceecCCCcccccccccc
Confidence 99999999999999999999999988888899999999999 6788899999998765 2333322211
Q ss_pred --ccccccCCCCchhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCC-CCCCceEEEEecCCC
Q psy8850 227 --HEYGLRSGTLATHQIVGMGEAFRLARI-EMKEELKRILFLQKRLYNGLMESIEEIYINGDMN-NRIPHNLNISFNFIE 302 (397)
Q Consensus 227 --~~~~~~~~~~~~~~~~~l~~al~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 302 (397)
...+++.++++...++++.++++++.+ +++++.++..++++++.+.|.+ .+++.+..+.. .....++.+.+++.+
T Consensus 237 ~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~ 315 (376)
T TIGR01977 237 SELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLRE-INKVKIYGPADPANRVGVVSFTVEGID 315 (376)
T ss_pred ccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc-CCCeEEeCCCCccccCCeEEEEECCCC
Confidence 113467789999999999999998865 6888999999999999999998 88888886532 223567778887777
Q ss_pred hHHHHHHhC---CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHH
Q psy8850 303 GESLLMAIK---DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 368 (397)
Q Consensus 303 ~~~~~~~l~---~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~ 368 (397)
..++...|. ||.+..|.+|++ .....+|. ...+.||++++.++|.+||++++++|++
T Consensus 316 ~~~~~~~L~~~~gi~v~~g~~~~~------~~~~~~g~---~~~~~iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 316 SEEVADILDEKFDIATRTGLHCAP------LAHKTIGT---FATGTIRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred HHHHHHHHhccCCEEEEcccccch------HHHHHhCC---CCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence 788888885 789988887765 33333332 2247899999999999999999999975
No 19
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=100.00 E-value=6.4e-40 Score=309.96 Aligned_cols=354 Identities=21% Similarity=0.268 Sum_probs=286.7
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHh
Q psy8850 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAH 80 (397)
Q Consensus 1 ~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~ 80 (397)
||+++++++|+.+++++.+.+.....++.. .+.......+..+++++.+++++|+++++|++++|+++++..++.++..
T Consensus 21 l~~~~~~~~p~~v~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~~~~~~~~~ 99 (397)
T TIGR01976 21 FDNPAGTQIPQSVADAVSAALTRSNANRGG-AYESSRRADQVVDDAREAVADLLNADPPEVVFGANATSLTFLLSRAISR 99 (397)
T ss_pred ecCCccCCCCHHHHHHHHHHHHhcCCCCCC-CchHHHHHHHHHHHHHHHHHHHcCCCCCeEEEeCCHHHHHHHHHHHHHh
Confidence 689999999999999999998765555544 3444444567789999999999999877899999999999888776631
Q ss_pred hhccCCCEEEEcCCCChhhHHHHHHH-hhCCcEEEEeccCC-CCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHH
Q psy8850 81 FYKKRGKHIITVQTEHKSVLDSIRKL-ENDGFRVTYLKPKN-NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEI 158 (397)
Q Consensus 81 ~~~~~g~~vl~~~~~~~s~~~~~~~~-~~~g~~v~~v~~~~-~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i 158 (397)
. .++|++|++++++|+++...+..+ ...|.+++.++.+. ++.+|++++++++++++++|++++++||||.+.|+++|
T Consensus 100 ~-~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~~~~i 178 (397)
T TIGR01976 100 R-WGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEATGELHPDDLASLLSPRTRLVAVTAASNTLGSIVDLAAI 178 (397)
T ss_pred c-CCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEeccccCCCcCHHHHHHhcCCCceEEEEeCCCCCCCccCCHHHH
Confidence 1 168999999999999988776443 44599999999875 68899999999999999999999999999999999999
Q ss_pred HHHHHhcCcEEEEecccccCccccccCcccccEEEeccccccCCCCceEEEEecCCCCccccccccC---CccccccCCC
Q psy8850 159 GELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGG---GHEYGLRSGT 235 (397)
Q Consensus 159 ~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 235 (397)
.++|+++|+++++|++|+.+..++++..+++|++++|+||++|+. +|+++++++..+.+.+....+ ....+++.|+
T Consensus 179 ~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~-~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~gt 257 (397)
T TIGR01976 179 TELVHAAGALVVVDAVHYAPHGLIDVQATGADFLTCSAYKFFGPH-MGILWGRPELLMNLPPYKLTFSYDTGPERFELGT 257 (397)
T ss_pred HHHHHHcCCEEEEehhhhccccCCCHHHcCCCEEEEechhhcCCc-eEEEEEcHHHHhhCCCccccCccCCCcchhcCCC
Confidence 999999999999999999887777877788999999999988875 899999987766655433221 2234578899
Q ss_pred CchhHHHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCC-CCCCCceEEEEec
Q psy8850 236 LATHQIVGMGEAFRLARIE---------------MKEELKRILFLQKRLYNGLMESIEEIYINGDM-NNRIPHNLNISFN 299 (397)
Q Consensus 236 ~~~~~~~~l~~al~~~~~~---------------~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~ 299 (397)
++...++++.++++++.+. +++..++..++++++++.|++ ++++.+..+. .....+++.+.++
T Consensus 258 ~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~ 336 (397)
T TIGR01976 258 PQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSD-LPGVTLYGVARLAARVPTVSFTVH 336 (397)
T ss_pred CCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEeCCCCccCCCceEEEEeC
Confidence 9999999999999987541 566778888999999999998 7778887652 1223456677776
Q ss_pred CCChHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHH
Q psy8850 300 FIEGESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLL 366 (397)
Q Consensus 300 ~~~~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l 366 (397)
+.+..++.+.|. ||.+..+..|.+ ..++.+++.. ..++||||+..++|++|+++++++|
T Consensus 337 ~~~~~~l~~~L~~~gI~v~~~~~~~~------~~~~~~~~~~--~~~~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 337 GLPPQRVVRRLADQGIDAWAGHFYAV------RLLRRLGLND--EGGVVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred CcCHHHHHHHHHHCCeEEEeCccchH------HHHHHhCCCC--CCCeEEEEeeccCCHHHHHHHHHhC
Confidence 666778888886 899998877764 5566777542 2368999999999999999999865
No 20
>PLN02724 Molybdenum cofactor sulfurase
Probab=100.00 E-value=4.2e-39 Score=324.96 Aligned_cols=363 Identities=20% Similarity=0.283 Sum_probs=287.7
Q ss_pred CCCCCCCCCCH-HHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCC--cEEEeCChhHHHHHHHHH
Q psy8850 1 MDYSATTPIDP-RVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPR--EIIWTSGATESNNLAIKG 77 (397)
Q Consensus 1 ~~~~~~~~~~~-~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~--~i~~~~g~t~a~~~~l~~ 77 (397)
|||++++++++ .|.+++.+++...++||++ .+..+....+.++++|+.+++++|++++ .|+||+|+|+|+++++.+
T Consensus 38 LD~Aatt~~~~~~V~~~~~~~~~~~~~np~s-~~~~s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~alnlva~~ 116 (805)
T PLN02724 38 LDHAGATLYSESQLEAALADFSSNVYGNPHS-QSDSSMRSSDTIESARQQVLEYFNAPPSDYACVFTSGATAALKLVGET 116 (805)
T ss_pred EeCCCCCCCCHHHHHHHHHHHHhhccCCCCc-CcchhhhHHHHHHHHHHHHHHHhCCCccceEEEEeCChHHHHHHHHHH
Confidence 79999998665 5666666777777889997 7777777888999999999999999655 489999999999999988
Q ss_pred hHhhhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccC--------CCCCCCH--HHHHHHh----------cCCc
Q psy8850 78 AAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPK--------NNGLITL--SQLEEKI----------CSDT 137 (397)
Q Consensus 78 l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~--------~~~~~d~--~~l~~~i----------~~~~ 137 (397)
+.. ++|++|+++..+|.+....+..+.+.|+++..++++ ..+.+++ +++++.+ .+++
T Consensus 117 l~~---~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t 193 (805)
T PLN02724 117 FPW---SSESHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAY 193 (805)
T ss_pred CCC---CCCCeEEEeeccccchHHHHHHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhccccccCCCc
Confidence 742 678999999999999886665556669999999886 3444544 6677654 2457
Q ss_pred eEEEEecccCcccccccHHHHHHHHHhc--------CcEEEEecccccCccccccCcccccEEEeccccccC-CCCceEE
Q psy8850 138 ILVSVMLVNNEIGVIQPILEIGELCRSK--------GVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYG-PKGIGAL 208 (397)
Q Consensus 138 ~~v~~~~~~~~tG~~~~l~~i~~l~~~~--------gi~livD~a~~~~~~~~~~~~~~~d~~~~s~~K~~g-~~g~g~~ 208 (397)
++|.+++.+|.||.+.|++.+..+++.. ++++++|++|+.|..++|+..+++|++++|+||++| |.|+|++
T Consensus 194 ~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~~piDv~~~~~Dfl~~S~HK~~GgP~G~G~L 273 (805)
T PLN02724 194 NLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGTSPPDLSRYPADFVVVSFYKIFGYPTGLGAL 273 (805)
T ss_pred ceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCCCCCChhhcCCCEEEEecceeccCCCCceEE
Confidence 8999999999999999999775555432 368999999999999999999999999999999666 9999999
Q ss_pred EEecCCCCccccccccCCc-----------------cccccCCCCchhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Q psy8850 209 YIRRNPRTRIEAQIHGGGH-----------------EYGLRSGTLATHQIVGMGEAFRLARI-EMKEELKRILFLQKRLY 270 (397)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~l~~al~~~~~-~~~~~~~~~~~~~~~l~ 270 (397)
+++++....+.+...||+. ..+|+.||+|+.+++++.++++++.+ +++++.++..++.+++.
T Consensus 274 ~vr~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~l~~ig~~~I~~~~~~L~~~l~ 353 (805)
T PLN02724 274 LVRRDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFKLLNRLTISAIAMHTWALTHYVA 353 (805)
T ss_pred EEehhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHH
Confidence 9999887777777776632 34688999999999999999999987 79999999999999999
Q ss_pred HHHhhhcC------cEEEeCCCC-----CCCCceEEEEecCCCh-----HHHHHHh--CCcEecccCccCCCCCChhhHH
Q psy8850 271 NGLMESIE------EIYINGDMN-----NRIPHNLNISFNFIEG-----ESLLMAI--KDIAVSSGSACTSASLEPSYVL 332 (397)
Q Consensus 271 ~~l~~~~~------~~~~~~~~~-----~~~~~~~~~~~~~~~~-----~~~~~~l--~~i~~~~g~~~~~~~~~~~~~~ 332 (397)
+.|.+ ++ ++.++++.. .....++.|.+.+.+. .++...+ .||.++.|.+|.++.+.
T Consensus 354 ~~L~~-l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v~~~~v~~l~~~~gI~vR~G~~Ca~~~~~----- 427 (805)
T PLN02724 354 NSLRN-LKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWVGHREVEKLASLSGIQLRTGCFCNPGACA----- 427 (805)
T ss_pred HHHHh-ccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEeCHHHHHHHHHhcCcEEeeccccCchHHH-----
Confidence 99998 76 577886531 2235677888776542 2222222 39999999999984221
Q ss_pred HhhCCCc---------------------cccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHH
Q psy8850 333 RALGCND---------------------ELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 333 ~~~g~~~---------------------~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 373 (397)
..+|... ....+++|+|++.++|.+|||+++++|++.....
T Consensus 428 ~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~~~~~ 489 (805)
T PLN02724 428 KYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISSFVST 489 (805)
T ss_pred HHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHHHhhcC
Confidence 1222210 1123889999999999999999999999987444
No 21
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=100.00 E-value=1.9e-37 Score=292.94 Aligned_cols=337 Identities=15% Similarity=0.182 Sum_probs=260.1
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhccCCCCCCCcchhh-hHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhH
Q psy8850 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGW-TAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAA 79 (397)
Q Consensus 1 ~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~ 79 (397)
||+++.+++|+.+.+++.+++..+...+.. .+..+. .......++++ + +++|+++++|+|++|+|+++++++.++.
T Consensus 31 ld~~a~g~~p~~v~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~-~l~g~~~~~v~~~~~~t~~l~~~~~~~~ 107 (406)
T TIGR01814 31 LDGNSLGLMPKAARNALKEELDKWAKIAIR-GHNTGKAPWFTLDESLLK-L-RLVGAKEDEVVVMNTLTINLHLLLASFY 107 (406)
T ss_pred ecCCCcCcCcHHHHHHHHHHHHHHHHhhhc-cCccCCCChhhhhhhhcc-c-cccCCCCCcEEEeCCchHHHHHHHHHhc
Confidence 687888899999999999888764323222 222111 11223333444 5 8999998999999999999999999874
Q ss_pred hhhccC---CCEEEEcCCCChhhHHHHHH-HhhCCcEE----EEeccCCCCCCCHHHHHHHhc---CCceEEEEecccCc
Q psy8850 80 HFYKKR---GKHIITVQTEHKSVLDSIRK-LENDGFRV----TYLKPKNNGLITLSQLEEKIC---SDTILVSVMLVNNE 148 (397)
Q Consensus 80 ~~~~~~---g~~vl~~~~~~~s~~~~~~~-~~~~g~~v----~~v~~~~~~~~d~~~l~~~i~---~~~~~v~~~~~~~~ 148 (397)
++ +++|++++.+|++....+.. +.+.|.++ +.++.++++.+|++++++.++ ++|++|++++++|.
T Consensus 108 ----~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~t~lv~~~~v~~~ 183 (406)
T TIGR01814 108 ----KPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPREEETLRLEDILDTIEKNGDDIAVILLSGVQYY 183 (406)
T ss_pred ----CCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccCCCCccCHHHHHHHHHhcCCCeEEEEEeccccc
Confidence 33 34789999999998887764 34448776 566666677889999998874 78999999999999
Q ss_pred ccccccHHHHHHHHHhcCcEEEEecccccCccccccCcccccEEEecccc-ccCCCCceEEEEecCCCCccccccccC--
Q psy8850 149 IGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEAQIHGG-- 225 (397)
Q Consensus 149 tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~~s~~K-~~g~~g~g~~~~~~~~~~~~~~~~~~~-- 225 (397)
||.+.|+++|.++||++|+++++|++|++|..++++..+++|++++|+|| ++||+| |+++++++....+.+...++
T Consensus 184 tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~~id~~~~gvD~~~~s~hK~l~g~pG-~~l~v~~~~~~~~~p~~~g~~~ 262 (406)
T TIGR01814 184 TGQLFDMAAITRAAHAKGALVGFDLAHAVGNVPLDLHDWGVDFACWCTYKYLNAGPG-AGAFVHEKHAHTERPRLAGWWG 262 (406)
T ss_pred cceecCHHHHHHHHHHcCCEEEEEcccccCCcccccccCCCCEEEEcCccccCCCCC-eEEEEehhhhhhcCCCCCcccC
Confidence 99999999999999999999999999999999999988899999999999 666768 77777665444444433331
Q ss_pred --------------CccccccCCCCchhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhhc----CcEEEeCCC
Q psy8850 226 --------------GHEYGLRSGTLATHQIVGMGEAFRLARI-EMKEELKRILFLQKRLYNGLMESI----EEIYINGDM 286 (397)
Q Consensus 226 --------------~~~~~~~~~~~~~~~~~~l~~al~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~----~~~~~~~~~ 286 (397)
....+++.|++|...++++.++++++.+ +++++.++..++.+++++.|++ + +++.+.++.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~-~~~~~~~~~i~~~~ 341 (406)
T TIGR01814 263 HARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEALRKKSLLLTDYLEELIKA-RCGGPPVLTIITPR 341 (406)
T ss_pred CCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHh-hcCCCCceEEeCCC
Confidence 1123566899999999999999999855 6899999999999999999988 4 358887753
Q ss_pred CC-CCCceEEEEecCCChHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEee-CCCCCHHHHHHH
Q psy8850 287 NN-RIPHNLNISFNFIEGESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTI-GRFTTEKEIDFT 362 (397)
Q Consensus 287 ~~-~~~~~~~~~~~~~~~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~-~~~~~~~~i~~~ 362 (397)
.. ..+.++.+.++ .+..++.+.|. +|.+... ..+.||+|+ +.++|.+|||++
T Consensus 342 ~~~~r~~~v~~~~~-~~~~~~~~~L~~~gi~v~~~-----------------------~~~~iRiS~~~~~nt~~did~l 397 (406)
T TIGR01814 342 DHAQRGCQLSLTHP-VPGKAVFQALIKRGVIGDKR-----------------------EPSVIRVAPVPLYNTFVDVYDA 397 (406)
T ss_pred ChhhcCCeEEEEec-CCHHHHHHHHHHCCEEEecc-----------------------CCCeEEEechhccCCHHHHHHH
Confidence 32 23556777777 56778887775 7665321 126899999 578999999999
Q ss_pred HHHHHHHH
Q psy8850 363 IKLLKMKV 370 (397)
Q Consensus 363 ~~~l~~~~ 370 (397)
+++|++++
T Consensus 398 ~~~l~~~~ 405 (406)
T TIGR01814 398 VNVLEEIL 405 (406)
T ss_pred HHHHHHHh
Confidence 99998764
No 22
>PLN02409 serine--glyoxylate aminotransaminase
Probab=100.00 E-value=5.9e-36 Score=281.58 Aligned_cols=339 Identities=14% Similarity=0.142 Sum_probs=271.0
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCC-cEEEeCChhHHHHHHHHHhH
Q psy8850 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPR-EIIWTSGATESNNLAIKGAA 79 (397)
Q Consensus 1 ~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~-~i~~~~g~t~a~~~~l~~l~ 79 (397)
|+++++.+.+++|++++.+... .| .+....+...++++.+++++|++.+ .+++++|+|++++.++..+.
T Consensus 12 l~~pGP~~~~~~V~~a~~~~~~---------~~-~~~~~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~~ 81 (401)
T PLN02409 12 LFVPGPVNIPERVLRAMNRPNE---------DH-RSPAFPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNTL 81 (401)
T ss_pred eccCCCCCCCHHHHHHhcCCCC---------CC-CCHHHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhcC
Confidence 3456777778888888765432 12 2456678999999999999999753 58899999999999998877
Q ss_pred hhhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcC----CceEEEEecccCcccccccH
Q psy8850 80 HFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS----DTILVSVMLVNNEIGVIQPI 155 (397)
Q Consensus 80 ~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~----~~~~v~~~~~~~~tG~~~~l 155 (397)
++||+|++++++|++.... ..+.+.|.+++.++.+.++.+|++++++++++ ++++|++++++|+||.+.|+
T Consensus 82 ----~~Gd~Vlv~~~~~~~~~~~-~~~~~~g~~v~~v~~~~~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~ 156 (401)
T PLN02409 82 ----SPGDKVVSFRIGQFSLLWI-DQMQRLNFDVDVVESPWGQGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDL 156 (401)
T ss_pred ----CCCCEEEEeCCCchhHHHH-HHHHHcCCceEEEECCCCCCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCH
Confidence 7999999999988876532 33445599999999886666899999999986 78999999999999999999
Q ss_pred HHHHHH--HHhcCcEEEEecccccCccccccCcccccEEEecccc-ccCCCCceEEEEecCCCCcccc-----ccccCC-
Q psy8850 156 LEIGEL--CRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEA-----QIHGGG- 226 (397)
Q Consensus 156 ~~i~~l--~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~~s~~K-~~g~~g~g~~~~~~~~~~~~~~-----~~~~~~- 226 (397)
++|.++ |+++|+++++|++++.|..++++..+++|++++|+|| +++|.|+|+++++++..+.+.+ ...++.
T Consensus 157 ~~i~~l~~~~~~g~~~vvD~v~s~g~~~id~~~~~~D~~~~s~~K~l~~P~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~ 236 (401)
T PLN02409 157 AGVRKLLDCAQHPALLLVDGVSSIGALDFRMDEWGVDVALTGSQKALSLPTGLGIVCASPKALEASKTAKSPRVFFDWAD 236 (401)
T ss_pred HHHHHHHhhhccCcEEEEEcccccCCccccccccCccEEEEcCccccCcCCCcceeEECHHHHHHHhcCCCCCeecCHHH
Confidence 999999 9999999999999999999999988899999999999 7788899999999876655433 111210
Q ss_pred -----ccccccCCCCchhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCC-CCCCCceEEEEec
Q psy8850 227 -----HEYGLRSGTLATHQIVGMGEAFRLARI-EMKEELKRILFLQKRLYNGLMESIEEIYINGDM-NNRIPHNLNISFN 299 (397)
Q Consensus 227 -----~~~~~~~~~~~~~~~~~l~~al~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~ 299 (397)
....+..++++...++++.++++++.+ +++++.+++.++++++++.|++ + ++.+..+. ..+.+.++++.++
T Consensus 237 ~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~-~-g~~~~~~~~~~~s~~v~~~~~p 314 (401)
T PLN02409 237 YLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEA-W-GLKLCTKKPEWRSDTVTAVVVP 314 (401)
T ss_pred HHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH-c-CCeeccCChhhcccceEEEeCC
Confidence 011233568999999999999998765 6999999999999999999988 5 77777643 3344556667665
Q ss_pred -CCChHHHHHHhC---CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHHHh
Q psy8850 300 -FIEGESLLMAIK---DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKLRE 375 (397)
Q Consensus 300 -~~~~~~~~~~l~---~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 375 (397)
+.+..++...+. ++.+..|... ..+..|||+...+++.+++.+++++|.+++.++..
T Consensus 315 ~~~~~~~l~~~l~~~~~i~i~~G~~~-------------------~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~~g~ 375 (401)
T PLN02409 315 EGIDSAEIVKNAWKKYNLSLGLGLNK-------------------VAGKVFRIGHLGNVNELQLLGALAGVEMVLKDVGY 375 (401)
T ss_pred CCCCHHHHHHHHHHhCCEEEEcCCCc-------------------ccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHHcCC
Confidence 456677776664 7888877422 12488999999999999999999999999887653
No 23
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=100.00 E-value=1.1e-35 Score=276.93 Aligned_cols=333 Identities=16% Similarity=0.186 Sum_probs=258.6
Q ss_pred CCCCCCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCC-cEEEeCChhHHHHHHHHHhHh
Q psy8850 2 DYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPR-EIIWTSGATESNNLAIKGAAH 80 (397)
Q Consensus 2 ~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~-~i~~~~g~t~a~~~~l~~l~~ 80 (397)
-++++.++|+++.+++.+.... + ......+..+++++.+++++|++++ .+++++|+|+|+.+++.++.
T Consensus 3 ~~~~~~~~~~~v~~a~~~~~~~---------~-~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~~- 71 (356)
T cd06451 3 LIPGPSNVPPRVLKAMNRPMLG---------H-RSPEFLALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNLL- 71 (356)
T ss_pred ccCCCcCCCHHHHHHhCCCccC---------C-CCHHHHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHhC-
Confidence 3577778899999998654321 1 1223456788999999999999544 47889999999999999887
Q ss_pred hhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcC-CceEEEEecccCcccccccHHHHH
Q psy8850 81 FYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS-DTILVSVMLVNNEIGVIQPILEIG 159 (397)
Q Consensus 81 ~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~~~tG~~~~l~~i~ 159 (397)
++|++|+++.++|++... ...+...|.+++.+|.++++.+|++++++.+++ ++++|++++++||+|.+.|+++|.
T Consensus 72 ---~~g~~vl~~~~~~~~~~~-~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~~~~i~ 147 (356)
T cd06451 72 ---EPGDKVLVGVNGVFGDRW-ADMAERYGADVDVVEKPWGEAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNPLEGIG 147 (356)
T ss_pred ---CCCCEEEEecCCchhHHH-HHHHHHhCCCeEEeecCCCCCCCHHHHHHHHhccCCCEEEEeccCCCcccccCHHHHH
Confidence 789999999888877421 122233499999999987788999999999987 899999999999999999999999
Q ss_pred HHHHhcCcEEEEecccccCccccccCcccccEEEecccc-ccCCCCceEEEEecCCCCcccc--ccccCC----------
Q psy8850 160 ELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEA--QIHGGG---------- 226 (397)
Q Consensus 160 ~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~~s~~K-~~g~~g~g~~~~~~~~~~~~~~--~~~~~~---------- 226 (397)
++|+++|+++++|++|++|..++++...++|++++|+|| +++|.|+|+++++++....+.. ...++.
T Consensus 148 ~~a~~~~~~li~D~~~~~g~~~~~~~~~~~d~~~~s~~K~l~~p~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (356)
T cd06451 148 ALAKKHDALLIVDAVSSLGGEPFRMDEWGVDVAYTGSQKALGAPPGLGPIAFSERALERIKKKTKPKGFYFDLLLLLKYW 227 (356)
T ss_pred HHHHhcCCEEEEeeehhccCccccccccCccEEEecCchhccCCCCcceeEECHHHHHHHHhcCCCCceeecHHHHHhhh
Confidence 999999999999999998887777777789999999999 6667789999998876554432 111110
Q ss_pred ccccccCCCCchhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEec-CCChH
Q psy8850 227 HEYGLRSGTLATHQIVGMGEAFRLARI-EMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN-FIEGE 304 (397)
Q Consensus 227 ~~~~~~~~~~~~~~~~~l~~al~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 304 (397)
....+..++++...+.++.++++++.. +++.+.++..++++++.+.|.+ + ++.+..++....+.++.+.++ +.+..
T Consensus 228 ~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (356)
T cd06451 228 GEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEA-L-GLKLLAKPELRSPTVTAVLVPEGVDGD 305 (356)
T ss_pred cccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH-c-CCeeccCcccCCCceEEEECCCCCCHH
Confidence 011245667888888899899988754 5888899999999999999998 4 777765433333444455554 34567
Q ss_pred HHHHHhC---CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHH
Q psy8850 305 SLLMAIK---DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKV 370 (397)
Q Consensus 305 ~~~~~l~---~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~ 370 (397)
++.+.|. ||.+.+|..+. .+++||++++.++++++|++++++|++++
T Consensus 306 ~~~~~L~~~~gI~~~~g~~~~-------------------~~~~iRis~~~~~~~e~v~~~~~~l~~~~ 355 (356)
T cd06451 306 EVVRRLMKRYNIEIAGGLGPT-------------------AGKVFRIGHMGEATREDVLGVLSALEEAL 355 (356)
T ss_pred HHHHHHHHhCCEEEecccccc-------------------cCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 7877775 78888764322 13799999999999999999999999875
No 24
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=100.00 E-value=8.2e-35 Score=271.62 Aligned_cols=330 Identities=15% Similarity=0.152 Sum_probs=249.1
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCC--cEEEeCChhHHHHHHHHHhHhhhcc
Q psy8850 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPR--EIIWTSGATESNNLAIKGAAHFYKK 84 (397)
Q Consensus 7 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~--~i~~~~g~t~a~~~~l~~l~~~~~~ 84 (397)
+|.|..+.+++.+++...+. + .+..+.+..+++++.+++++|++++ .|++|+|+|+|++.++.++. .
T Consensus 8 ~pgp~~~~~~v~~~~~~~~~------~-~~~~~~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~----~ 76 (363)
T TIGR02326 8 TPGPLTTSRTVKEAMLFDWC------T-WDSDYNIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAV----P 76 (363)
T ss_pred cCCCCCCCHHHHHHhCCCCC------C-CChHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcC----C
Confidence 34555555666655544332 1 1235677889999999999999764 69999999999999999987 5
Q ss_pred CCCEEEE-cCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcC--CceEEEEecccCcccccccHHHHHHH
Q psy8850 85 RGKHIIT-VQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS--DTILVSVMLVNNEIGVIQPILEIGEL 161 (397)
Q Consensus 85 ~g~~vl~-~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~--~~~~v~~~~~~~~tG~~~~l~~i~~l 161 (397)
+++++++ .+.+|+.... ..+...|.+++.++.+.++.+|++++++++++ +++++++++++|+||.+.|+++|.++
T Consensus 77 ~~~~vlv~~~~~~~~~~~--~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~i~~I~~l 154 (363)
T TIGR02326 77 KDGKLLVVINGAYGARIV--QIAEYLGIPHHVVDTGEVEPPDVVEVEAILAADPAITHIALVHCETTTGILNPIEAVAKL 154 (363)
T ss_pred CCCeEEEEeCChhhHHHH--HHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhCCCccEEEEEeecCCccccCcHHHHHHH
Confidence 6666544 5555544321 22234499999999988888999999999875 45788999999999999999999999
Q ss_pred HHhcCcEEEEecccccCccccccCcccccEEEecccc-ccCCCCceEEEEecCCCCccccccccCC-----------ccc
Q psy8850 162 CRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEAQIHGGG-----------HEY 229 (397)
Q Consensus 162 ~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~~s~~K-~~g~~g~g~~~~~~~~~~~~~~~~~~~~-----------~~~ 229 (397)
||+||+++++|+++++|..++++..+++|++++|+|| ++||.|+|+++++++..+.+.+...+.. ...
T Consensus 155 ~~~~g~~livD~~~~~g~~~~~~~~~~~D~~~~s~~K~l~~p~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (363)
T TIGR02326 155 AHRHGKVTIVDAMSSFGGIPIDIAELHIDYLISSANKCIQGVPGFGFVIARQAELAACKGNARSLSLDLYDQWRCMEDNH 234 (363)
T ss_pred HHHcCCEEEEEccccccCcccchhhcCccEEEecCccccccCCcceEEEECHHHHHHhhcCCCceeecHHHHHHHHhccC
Confidence 9999999999999999998999888899999999999 7788899999999876554332111100 001
Q ss_pred cccCCCCchhHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecC---CChH
Q psy8850 230 GLRSGTLATHQIVGMGEAFRLARI--EMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF---IEGE 304 (397)
Q Consensus 230 ~~~~~~~~~~~~~~l~~al~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 304 (397)
+....+++...+.++.++++.+.+ +++++.+++.++++++++.|++ + ++.+..++....+..+++.++. .+..
T Consensus 235 ~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (363)
T TIGR02326 235 GKWRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRA-L-GFEPLLDDEIQSPIITSFYSPEDPDYRFA 312 (363)
T ss_pred CCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHH-c-CCeeccCcccCCceEEEEECCCCCCCCHH
Confidence 112235678889999999987744 3788999999999999999988 4 6666654433444556677764 3556
Q ss_pred HHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHH
Q psy8850 305 SLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVK 371 (397)
Q Consensus 305 ~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 371 (397)
++.+.|. ||.+.+|..+. .+.|||++..+++.+++++++++|++++.
T Consensus 313 ~v~~~L~~~gi~v~~g~~~~--------------------~~~iRi~~~~~~~~edv~~~l~~l~~~l~ 361 (363)
T TIGR02326 313 DFYQRLKEQGFVIYPGKVSQ--------------------VDCFRIGNIGEVDAADITRLLTAIGKAMY 361 (363)
T ss_pred HHHHHHHHCCEEEECCcCCC--------------------CCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 7777776 89988774321 27899998667899999999999998753
No 25
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=100.00 E-value=7.2e-33 Score=259.16 Aligned_cols=345 Identities=14% Similarity=0.106 Sum_probs=256.0
Q ss_pred CCCCC--------CCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCC-C-CcEE--EeCChh
Q psy8850 1 MDYSA--------TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYAD-P-REII--WTSGAT 68 (397)
Q Consensus 1 ~~~~~--------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~-~-~~i~--~~~g~t 68 (397)
+|+++ ++++.+++.+.+.+.+...++||++ . +.. .+.++++++++++++|++ + +++. +|+|||
T Consensus 37 ld~~a~~~~~~~~tt~~~p~~~~~~~~~l~~~~~np~s-~---~~~-~~le~~~~~~la~llg~~~~~~~~~g~~TsGgT 111 (431)
T TIGR01788 37 LDGNPRLNLATFVTTWMEPEARKLMDETINKNMIDKDE-Y---PQT-AEIENRCVNMLADLWHAPAKDAEAVGTSTIGSS 111 (431)
T ss_pred hcCCcceeeeeeeCCCCCHHHHHHHHHHHhcCCCCccc-C---ccH-HHHHHHHHHHHHHHhCCCCCCCCCeEEEechHH
Confidence 47788 8898999999999999876777765 2 223 378999999999999998 3 4544 489999
Q ss_pred HHHHHHHHHhHhhhc----c-----CCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCC-CCCCHHHHHHHhcCCce
Q psy8850 69 ESNNLAIKGAAHFYK----K-----RGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNN-GLITLSQLEEKICSDTI 138 (397)
Q Consensus 69 ~a~~~~l~~l~~~~~----~-----~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~-~~~d~~~l~~~i~~~~~ 138 (397)
+|+.+++.++...+. . .+.+|++++.+|++...+...+ |++++.+|++++ +.+|+++|+++++++|.
T Consensus 112 EAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~~~l---g~~v~~i~~d~~~~~vd~~~L~~~i~~~t~ 188 (431)
T TIGR01788 112 EAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKFARYF---DVELREVPMDPGRYVIDPEQVVEAVDENTI 188 (431)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHHHHHc---CceeEEEecCCCceeeCHHHHHHHHhhCCe
Confidence 999999877642210 1 1248999999999999888877 899999999875 58999999999999999
Q ss_pred EEEEecccCcccccccHHHHHHHHHhc------CcEEEEecccccC-------ccccccCcccccEEEeccccc-cCCCC
Q psy8850 139 LVSVMLVNNEIGVIQPILEIGELCRSK------GVIFHCDAAQAVG-------KIDINIQNYKVDLMSFSAHKI-YGPKG 204 (397)
Q Consensus 139 ~v~~~~~~~~tG~~~~l~~i~~l~~~~------gi~livD~a~~~~-------~~~~~~~~~~~d~~~~s~~K~-~g~~g 204 (397)
+|++++.+|.+|.+.|+++|+++|+++ |+++|+|++|+.+ ..+.++...++|++++|+||+ +||.|
T Consensus 189 lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~~~~~DSis~s~HK~~~~P~g 268 (431)
T TIGR01788 189 GVVCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFRLPRVKSINVSGHKYGLVYPG 268 (431)
T ss_pred EEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcCCCCceEEEECchhccCCCCC
Confidence 999999999999999999999999999 9999999999943 344555555789999999994 59999
Q ss_pred ceEEEEecC--CCCccc--cccccCCc-cccccCCCCchhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhcC
Q psy8850 205 IGALYIRRN--PRTRIE--AQIHGGGH-EYGLRSGTLATHQIVGMGEAFRLA-RIEMKEELKRILFLQKRLYNGLMESIE 278 (397)
Q Consensus 205 ~g~~~~~~~--~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~l~~al~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~ 278 (397)
+|+++++++ ....+. +...++.. ..... ++.+....++++..+..+ ..++.++.++..++++++.+.|++ .+
T Consensus 269 ~G~l~~r~~~~l~~~~~~~~~yl~~~~~~~t~~-~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~-~~ 346 (431)
T TIGR01788 269 VGWVIWRDEEALPEELIFHVNYLGGDEPTFTLN-FSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAK-LG 346 (431)
T ss_pred cEEEEEeChHHcchhheecccccCCCCCCccee-cCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHh-CC
Confidence 999999875 112111 11122211 11111 222222334444554444 458999999999999999999999 88
Q ss_pred cEEEeCCCCCCCCceEEEEecC-----CChHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeC
Q psy8850 279 EIYINGDMNNRIPHNLNISFNF-----IEGESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIG 351 (397)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~ 351 (397)
++.++.+.. ...+++|.+++ .+..++.+.|. |+.+..- -.|. + -.+..++|+++.
T Consensus 347 ~~el~~~~~--~~~iV~Fr~~~~~~~~~~~~~l~~~L~~~G~~~~~~--~~p~-----------~---~~~~~~lR~~~~ 408 (431)
T TIGR01788 347 PFEIISDGS--GIPLVAFKLKDDADPGYTLYDLSHRLRERGWIVPAY--TLPK-----------N---AEDIVVMRIVVR 408 (431)
T ss_pred CEEEeeCCC--CceEEEEEeCCCCCCCcCHHHHHHHHHHCCCcccCC--CCCC-----------c---cCCeEEEEEEec
Confidence 899887521 25677777763 44567777776 5433211 0110 0 012356999998
Q ss_pred CCCCHHHHHHHHHHHHHHHHHH
Q psy8850 352 RFTTEKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 352 ~~~~~~~i~~~~~~l~~~~~~~ 373 (397)
...+.+.++++++.|++++..+
T Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 409 EGFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred CCCCHHHHHHHHHHHHHHHHhh
Confidence 8889999999999999998764
No 26
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=100.00 E-value=2.3e-33 Score=262.48 Aligned_cols=308 Identities=15% Similarity=0.144 Sum_probs=239.2
Q ss_pred HHHHHHHHHHHHHHHhCCCC--CcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEe
Q psy8850 39 AEKAIEKARNEVAQLIYADP--REIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYL 116 (397)
Q Consensus 39 ~~~~~~~~~~~la~~~~~~~--~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v 116 (397)
..+...++++.+++++|+++ +.+.+++|+|+++..++.++. .++++|++..+.+++... ...+...|.+++.+
T Consensus 35 ~~~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~----~~~~~vlv~~~~~~~~~~-~~~~~~~g~~~~~i 109 (368)
T PRK13479 35 FNALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLV----PRDGKVLVPDNGAYGARI-AQIAEYLGIAHVVL 109 (368)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhcc----CCCCeEEEEeCCchHHHH-HHHHHHcCCcEEEE
Confidence 44688999999999999965 358899999999999999987 677888887665555431 23334449999999
Q ss_pred ccCCCCCCCHHHHHHHhcC--CceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCccccccCcccccEEEe
Q psy8850 117 KPKNNGLITLSQLEEKICS--DTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSF 194 (397)
Q Consensus 117 ~~~~~~~~d~~~l~~~i~~--~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~~ 194 (397)
+.++++.+|++++++++++ ++++|++++++|+||.+.|+++|.++|+++|+++++|+++++|..++++..+++|++++
T Consensus 110 ~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~~~~i~~l~~~~~~~livDa~~~~g~~~~~~~~~~~d~~v~ 189 (368)
T PRK13479 110 DTGEDEPPDAAEVEAALAADPRITHVALVHCETTTGILNPLDEIAAVAKRHGKRLIVDAMSSFGAIPIDIAELGIDALIS 189 (368)
T ss_pred ECCCCCCCCHHHHHHHHHhCCCCcEEEEEcccCccccccCHHHHHHHHHHcCCEEEEEcccccCCccccccccCceEEEe
Confidence 9987778999999999875 45689999999999999999999999999999999999999998888888888999999
Q ss_pred cccc-ccCCCCceEEEEecCCCCccccccccCCcc----------ccccCCCCchhHHHHHHHHHHHHHH--HHHHHHHH
Q psy8850 195 SAHK-IYGPKGIGALYIRRNPRTRIEAQIHGGGHE----------YGLRSGTLATHQIVGMGEAFRLARI--EMKEELKR 261 (397)
Q Consensus 195 s~~K-~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~l~~al~~~~~--~~~~~~~~ 261 (397)
|+|| ++|+.|+|+++++++..+.+......+... .+....+++...++++.++++.+.+ ++++..++
T Consensus 190 s~~K~l~g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~ 269 (368)
T PRK13479 190 SANKCIEGVPGFGFVIARRSELEACKGNSRSLSLDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGAR 269 (368)
T ss_pred cCccccccCCCceEEEECHHHHHHhhcCCCCeeecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHH
Confidence 9999 788889999999987655543322110000 0111236788888999999997744 37888899
Q ss_pred HHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecC---CChHHHHHHhC--CcEecccCccCCCCCChhhHHHhhC
Q psy8850 262 ILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF---IEGESLLMAIK--DIAVSSGSACTSASLEPSYVLRALG 336 (397)
Q Consensus 262 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g 336 (397)
+.++++++++.|++ + ++.+..++....+.++.+.++. .+..++.+.|. ||.+.+|..+.
T Consensus 270 ~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~g~~~~-------------- 333 (368)
T PRK13479 270 YANNQRTLVAGMRA-L-GFEPLLDAEIQSPIIVTFHAPADPAYDFKEFYERLKEQGFVIYPGKLTQ-------------- 333 (368)
T ss_pred HHHHHHHHHHHHHH-c-CCcccCCchhcCceEEEEECCCCCCcCHHHHHHHHHHCCEEEecCCCCC--------------
Confidence 99999999999998 4 6666544332334556666653 34567777776 89887763221
Q ss_pred CCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHH
Q psy8850 337 CNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 337 ~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 373 (397)
.+.+|+++..+++.+|+++++++|+++++++
T Consensus 334 ------~~~iRis~~~~~t~edi~~~l~~L~~~l~~~ 364 (368)
T PRK13479 334 ------VDTFRIGCIGDVDAADIRRLVAAIAEALYWM 364 (368)
T ss_pred ------CCEEEEecCCCCCHHHHHHHHHHHHHHHHHc
Confidence 2689999766789999999999999998754
No 27
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=4.6e-33 Score=250.35 Aligned_cols=336 Identities=16% Similarity=0.212 Sum_probs=275.5
Q ss_pred CCCCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCC-CcEEEeCChhHHHHHHHHHhHhhh
Q psy8850 4 SATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADP-REIIWTSGATESNNLAIKGAAHFY 82 (397)
Q Consensus 4 ~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~-~~i~~~~g~t~a~~~~l~~l~~~~ 82 (397)
.++.+.+++|+.+|..... +..+..+.....++.+.++..++.+. +-++++++||.|++.++.+++
T Consensus 11 PGP~~v~~~V~~am~~~~~----------~h~s~~F~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~--- 77 (383)
T COG0075 11 PGPVPVPPRVLLAMARPMV----------GHRSPDFVGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLV--- 77 (383)
T ss_pred CCCCCCCHHHHHHhcCCCC----------CCCCHHHHHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhcc---
Confidence 4566778888888766442 23456778899999999999999984 457778999999999999999
Q ss_pred ccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcC--CceEEEEecccCcccccccHHHHHH
Q psy8850 83 KKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS--DTILVSVMLVNNEIGVIQPILEIGE 160 (397)
Q Consensus 83 ~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~--~~~~v~~~~~~~~tG~~~~l~~i~~ 160 (397)
+|||+|++.....++...+ +.++++|.+++.+..+..-.+|++++++++++ +.++|.++|..++||.+.|+++|++
T Consensus 78 -~pgdkVLv~~nG~FG~R~~-~ia~~~g~~v~~~~~~wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnpl~~I~~ 155 (383)
T COG0075 78 -EPGDKVLVVVNGKFGERFA-EIAERYGAEVVVLEVEWGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNPLKEIAK 155 (383)
T ss_pred -CCCCeEEEEeCChHHHHHH-HHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcCCCccEEEEEeccCcccccCcHHHHHH
Confidence 8999999887766665432 44566699999999998888999999999984 5789999999999999999999999
Q ss_pred HHHhcCcEEEEecccccCccccccCcccccEEEecccc-ccCCCCceEEEEecCCCCccccc-----cccC------Ccc
Q psy8850 161 LCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEAQ-----IHGG------GHE 228 (397)
Q Consensus 161 l~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~~s~~K-~~g~~g~g~~~~~~~~~~~~~~~-----~~~~------~~~ 228 (397)
+|++||+++|||++.++|..++++.+|++|+++.+.+| +.+|+|+|++.++++..+.+... +.+. ...
T Consensus 156 ~~k~~g~l~iVDaVsS~Gg~~~~vd~wgiDv~itgSQK~l~~PPGla~v~~S~~a~e~~~~~~~~~~ylDL~~~~~~~~~ 235 (383)
T COG0075 156 AAKEHGALLIVDAVSSLGGEPLKVDEWGIDVAITGSQKALGAPPGLAFVAVSERALEAIEERKHPSFYLDLKKWLKYMEK 235 (383)
T ss_pred HHHHcCCEEEEEecccCCCcccchhhcCccEEEecCchhccCCCccceeEECHHHHHHHhcCCCCceeecHHHHHHHHhh
Confidence 99999999999999999999999999999999999999 78899999999998876655322 1110 001
Q ss_pred ccccCCCCchhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecC-CChHHH
Q psy8850 229 YGLRSGTLATHQIVGMGEAFRLARI-EMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF-IEGESL 306 (397)
Q Consensus 229 ~~~~~~~~~~~~~~~l~~al~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 306 (397)
.+..+.|+++..++++..+++.+.+ |++++.++++++++++++++++ .|+.++.++....+.+..+..+. .+..++
T Consensus 236 ~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~a--lGl~~~~~~~~~s~tvta~~~P~g~~~~~~ 313 (383)
T COG0075 236 KGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEA--LGLELFADPERRSPTVTAIKVPEGVDDKKV 313 (383)
T ss_pred cCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH--cCCccccCcccCCCceEEEECCCCCCcHHH
Confidence 1456779999999999999998855 7999999999999999999999 68888886666777888888774 344444
Q ss_pred HHHhC---CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHHHh
Q psy8850 307 LMAIK---DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKLRE 375 (397)
Q Consensus 307 ~~~l~---~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 375 (397)
...+. ++.+.+|. .+..+..+||+.-.+.+..++..++.+|..++.++..
T Consensus 314 ~~~~~~~~g~~i~gg~-------------------~~l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~g~ 366 (383)
T COG0075 314 RRALLKEYGVEIAGGQ-------------------GPLKGKIFRIGHMGNVRPEDVLAALAALEAALRELGV 366 (383)
T ss_pred HHHHHHhCCEEecccc-------------------cccCccEEEEecCccCCHHHHHHHHHHHHHHHHHcCC
Confidence 44443 67776653 3344689999988789999999999999999998865
No 28
>PRK02769 histidine decarboxylase; Provisional
Probab=100.00 E-value=1.1e-32 Score=254.77 Aligned_cols=321 Identities=20% Similarity=0.216 Sum_probs=250.4
Q ss_pred CHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCc--EEEeCChhHHHHHHHHHhHhhhccCCC
Q psy8850 10 DPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPRE--IIWTSGATESNNLAIKGAAHFYKKRGK 87 (397)
Q Consensus 10 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~--i~~~~g~t~a~~~~l~~l~~~~~~~g~ 87 (397)
+....+.+........+||.+ .+..+....+...++++++++++|+++++ ..+|+|||+++..++.+.... .+++
T Consensus 35 ~~~~~~~~~~~~~~n~gnp~~-~~~~g~~~~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~--~~~~ 111 (380)
T PRK02769 35 DYSALKRFFSFSINNCGDPYS-KSNYPLNSFDFERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLAREL--FPDG 111 (380)
T ss_pred CHHHHHHHHHhhhccCCCccc-cCCCCCChHHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHh--CCCc
Confidence 345566666666566788877 77767677889999999999999997655 589999999988776654322 4578
Q ss_pred EEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcCC---ceEEEEecccCcccccccHHHHHHHHHh
Q psy8850 88 HIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSD---TILVSVMLVNNEIGVIQPILEIGELCRS 164 (397)
Q Consensus 88 ~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~---~~~v~~~~~~~~tG~~~~l~~i~~l~~~ 164 (397)
+|++++.+|+|...++..+ |.+...|+.+++|.+|+++|+++++++ |.+|++++++|++|.+.|+++|.++|++
T Consensus 112 ~ii~s~~~H~Sv~ka~~~l---g~~~~~V~~~~~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idpi~~I~~i~~~ 188 (380)
T PRK02769 112 TLYYSKDTHYSVSKIARLL---RIKSRVITSLPNGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDNIKEIQEILKK 188 (380)
T ss_pred EEEeCCCceehHHHHHHHc---CCCCceeccCCCCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCCHHHHHHHHHH
Confidence 9999999999999998888 777778888888999999999999876 9999999999999999999999999999
Q ss_pred cC---cEEEEecccccCccc-------cccCcccccEEEeccccccC-CCCceEEEEecCCCCccccccccCCccccccC
Q psy8850 165 KG---VIFHCDAAQAVGKID-------INIQNYKVDLMSFSAHKIYG-PKGIGALYIRRNPRTRIEAQIHGGGHEYGLRS 233 (397)
Q Consensus 165 ~g---i~livD~a~~~~~~~-------~~~~~~~~d~~~~s~~K~~g-~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (397)
|| +++++|++++.+..+ +++.. ++|++++|+||+++ |.|+|+++++++....+.+.............
T Consensus 189 ~g~~~~~lHVDaA~gg~~~p~~~~~~~~d~~~-~vDsis~s~HK~~~~P~g~G~l~~r~~~~~~~~~~~~yl~~~d~t~~ 267 (380)
T PRK02769 189 IGIDDYYIHADAALSGMILPFVNNPPPFSFAD-GIDSIAISGHKFIGSPMPCGIVLAKKKYVERISVDVDYIGSRDQTIS 267 (380)
T ss_pred hCCCceEEEEEecccceeecccCccccCCccC-CCCEEEECCcccCCCCCCcEEEEEehhhhhhcccCccccCCCCCCcc
Confidence 98 699999999988774 56655 89999999999654 99999999998765544321110011112346
Q ss_pred CCCchhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCChHHHHHHhCC
Q psy8850 234 GTLATHQIVGMGEAFRLA-RIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAIKD 312 (397)
Q Consensus 234 ~~~~~~~~~~l~~al~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 312 (397)
|+.+...+++++++++.+ .+++.++.+++.++++++.+.|++ .++.++.++. ...+.|+..+ .++. ++
T Consensus 268 GSR~g~~~l~lw~aL~~lg~~G~~~~~~~~~~la~~l~~~L~~--~g~~~~~~p~-----~~~v~f~~~~-~~~~---~~ 336 (380)
T PRK02769 268 GSRNGHTALLLWAAIRSLGSKGLRQRVQHCLDMAQYAVDRLQA--NGIPAWRNPN-----SITVVFPCPS-ERIW---KK 336 (380)
T ss_pred CCCCcHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHh--CCCEEEcCCC-----ceEEEEcCCC-HHHH---hC
Confidence 788888889999999987 457999999999999999999988 5777776643 3345555332 2322 22
Q ss_pred cEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHH
Q psy8850 313 IAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKK 372 (397)
Q Consensus 313 i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 372 (397)
-.+..- +..+|+++...++.+.+|.+++.|.+....
T Consensus 337 w~l~~~------------------------~~~~hi~~~~~~~~~~~~~f~~dl~~~~~~ 372 (380)
T PRK02769 337 WHLATS------------------------GNQAHIITMPHHNKQQIDSLIDELIFDLKN 372 (380)
T ss_pred eeEccc------------------------CCEEEEEECCCCCHHHHHHHHHHHHHHHhc
Confidence 222110 257999999989999999999999887653
No 29
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=100.00 E-value=1.9e-33 Score=268.06 Aligned_cols=353 Identities=19% Similarity=0.214 Sum_probs=267.8
Q ss_pred CCCCCCCHHHHHHHHHHHhhcc--CCCCCCCcchhhhHHHHHHH-HHHHHHHHhCCCCCcEEEe---CChhHHHHHHHHH
Q psy8850 4 SATTPIDPRVVDKMIPYLRVQF--GNPASRNHIYGWTAEKAIEK-ARNEVAQLIYADPREIIWT---SGATESNNLAIKG 77 (397)
Q Consensus 4 ~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~la~~~~~~~~~i~~~---~g~t~a~~~~l~~ 77 (397)
++...+++.+++++...+...+ ++|.+ .|..+....+.+++ +++.++++++++++++.++ +||++|+.+++.+
T Consensus 41 ~sen~~s~~v~~~~~~~l~~~y~~g~p~s-~~~~g~~~~~~iE~~ar~~~a~lf~a~~~~~~~~~~~~sgt~an~~v~~a 119 (452)
T PTZ00094 41 ASENFTSRAVLECLGSCFTNKYAEGLPGN-RYYGGNEVVDKIENLCQKRALEAFGLDPEEWGVNVQPYSGSPANFAVYTA 119 (452)
T ss_pred cccccCCHHHHHHhcchhhccccCCCCCc-cccccchHHHHHHHHHHHHHHHHhCCCcccceeecCCCchHHHHHHHHHH
Confidence 5666789999999999998877 89988 77777777777774 8999999999987777677 7999999999999
Q ss_pred hHhhhccCCCEEEEcCCCChhhHHHHHHHhh-------CCcEEEEeccCCCCCCCHHHHHHHhcC-CceEEEEecccCcc
Q psy8850 78 AAHFYKKRGKHIITVQTEHKSVLDSIRKLEN-------DGFRVTYLKPKNNGLITLSQLEEKICS-DTILVSVMLVNNEI 149 (397)
Q Consensus 78 l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~-------~g~~v~~v~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~~~t 149 (397)
+. ++||+|++++.+|+++...+..+.+ .++++..++.+.+|.+|++++++++++ +++++++. ++.+
T Consensus 120 l~----~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~id~~~L~~~l~~~~~~lvi~~--~s~~ 193 (452)
T PTZ00094 120 LL----QPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNEKGLIDYDKLEELAKAFRPKLIIAG--ASAY 193 (452)
T ss_pred hc----CCCCEEEecccccCCcccccccccccccccceeeeeeeecccCCCCCcCHHHHHHHHHHhCCCEEEEe--CCCC
Confidence 86 7899999999999998776543221 124455666777799999999999964 67777664 3459
Q ss_pred cccccHHHHHHHHHhcCcEEEEecccccCccccccCc---ccccEEEecccc-ccCCCCceEEEEecCCCCccccccccC
Q psy8850 150 GVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQN---YKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEAQIHGG 225 (397)
Q Consensus 150 G~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~---~~~d~~~~s~~K-~~g~~g~g~~~~~~~~~~~~~~~~~~~ 225 (397)
|...|+++|.++||++|+++++|++|++|..+.+... .++|++++|+|| ++||.| |+++++++....+.......
T Consensus 194 g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~~~~D~l~~S~hK~l~GP~G-g~l~~~~~~~~~l~~~~~~~ 272 (452)
T PTZ00094 194 PRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPFPYADVVTTTTHKSLRGPRS-GLIFYRKKVKPDIENKINEA 272 (452)
T ss_pred CCccCHHHHHHHHHHcCCEEEEeccchhccccCCCCCCCCCCCcEEEcCCccCCCCCCc-eEEEEecccchHHHHhhccc
Confidence 9999999999999999999999999999988654322 268999999999 778987 88888865543332211111
Q ss_pred CccccccCCCCchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCChH
Q psy8850 226 GHEYGLRSGTLATHQIVGMGEAFRLAR-IEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGE 304 (397)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~l~~al~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (397)
.. ..+ .|+++...++++.++++++. .+.+++.+++.+++++|.+.|.+ .++.+..+........+.+..++.+..
T Consensus 273 ~~-p~~-~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~--~g~~v~~~~~~~~~~~v~~~~~~~~~~ 348 (452)
T PTZ00094 273 VF-PGL-QGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEK--RGYDLVTGGTDNHLVLVDLRPFGITGS 348 (452)
T ss_pred cC-CCC-CCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHh--CCcEEecCCCCCceEeecCCcCCCCHH
Confidence 01 112 36788889999999999885 46788899999999999999988 477776532212123334444456677
Q ss_pred HHHHHhC--CcEec-ccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCC----HHHHHHHHHHHHHHHHHHHhcC
Q psy8850 305 SLLMAIK--DIAVS-SGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTT----EKEIDFTIKLLKMKVKKLRELS 377 (397)
Q Consensus 305 ~~~~~l~--~i~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~----~~~i~~~~~~l~~~~~~~~~~~ 377 (397)
.+...|. ||.+. .+..+.+ .....+.||++++.+++ ++||+++++.|.+++.......
T Consensus 349 ~~~~~L~~~gI~vs~~~~p~~~---------------~~~~~~~vRis~~~~tt~g~~~~di~~l~~~l~~~~~~~~~~~ 413 (452)
T PTZ00094 349 KMEKLLDAVNISVNKNTIPGDK---------------SALNPSGVRLGTPALTTRGAKEKDFKFVADFLDRAVKLAQEIQ 413 (452)
T ss_pred HHHHHHHHCCcEEecccCCCCC---------------cCCCCCeEEECCHHHHhCCCCHHHHHHHHHHHHHHHHHHhhhh
Confidence 7777775 88884 4433322 11123789999987766 9999999999999999888878
Q ss_pred ccchhh
Q psy8850 378 PLWDMH 383 (397)
Q Consensus 378 ~~~~~~ 383 (397)
++++++
T Consensus 414 ~~~~~~ 419 (452)
T PTZ00094 414 KQVGKK 419 (452)
T ss_pred hhcccc
Confidence 777443
No 30
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-33 Score=262.81 Aligned_cols=326 Identities=17% Similarity=0.133 Sum_probs=241.4
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhC--CCCCc-EEEeCChhHHHHHHHHHhHhhhcc
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIY--ADPRE-IIWTSGATESNNLAIKGAAHFYKK 84 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~--~~~~~-i~~~~g~t~a~~~~l~~l~~~~~~ 84 (397)
++|+.+++++.+++..-. . .|.......+..+.+.+.+.+.+| .++++ |++|+|+++|+..++.+++ +
T Consensus 41 ~~p~~i~~a~~~a~~~~~-~----~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~~~~a~~----~ 111 (393)
T COG0436 41 PTPEHIIEAAIEALEEGG-T----HYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFLAFLALL----N 111 (393)
T ss_pred CCCHHHHHHHHHHHhccc-C----CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHHHHHHhc----C
Confidence 568889999999887521 0 011122223344444444445545 34445 9999999999999999999 8
Q ss_pred CCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccC---CCCCCCHHHHHHHhcCCceEEEEecccCccccccc---HHHH
Q psy8850 85 RGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPK---NNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---ILEI 158 (397)
Q Consensus 85 ~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~---~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~---l~~i 158 (397)
+||+|++++|.|+++...+..+ |.+++.++++ .++.+|+++|+++++++|++|++.+|+||||.+++ +++|
T Consensus 112 pGDeVlip~P~Y~~y~~~~~~~---gg~~v~v~l~~~~~~f~~d~~~l~~~i~~ktk~i~ln~P~NPTGav~~~~~l~~i 188 (393)
T COG0436 112 PGDEVLIPDPGYPSYEAAVKLA---GGKPVPVPLDEEENGFKPDLEDLEAAITPKTKAIILNSPNNPTGAVYSKEELKAI 188 (393)
T ss_pred CCCEEEEeCCCCcCHHHHHHhc---CCEEEEEeCCcCccCCcCCHHHHHhhcCccceEEEEeCCCCCcCcCCCHHHHHHH
Confidence 9999999999999999999988 9999999975 36899999999999999999999999999999998 6789
Q ss_pred HHHHHhcCcEEEEecccccCc----cccccCc----ccccEEEeccccccCCCC--ceEEEEe-cCCCCccccccccCCc
Q psy8850 159 GELCRSKGVIFHCDAAQAVGK----IDINIQN----YKVDLMSFSAHKIYGPKG--IGALYIR-RNPRTRIEAQIHGGGH 227 (397)
Q Consensus 159 ~~l~~~~gi~livD~a~~~~~----~~~~~~~----~~~d~~~~s~~K~~g~~g--~g~~~~~-~~~~~~~~~~~~~~~~ 227 (397)
+++|++||++||.|++|..-. .+..+.. ....+.+.|+||.++..| +||++++ +++.+.+....
T Consensus 189 ~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~~~~~l~~~~~~~~----- 263 (393)
T COG0436 189 VELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVGPPEELIAALRKLK----- 263 (393)
T ss_pred HHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccccccccceeEeecChHHHHHHHHHHH-----
Confidence 999999999999999997211 1111111 134677889999766656 8999988 44444433111
Q ss_pred cccccCCCCchhHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecC-CChH
Q psy8850 228 EYGLRSGTLATHQIVGMGEAFRLA--RIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF-IEGE 304 (397)
Q Consensus 228 ~~~~~~~~~~~~~~~~l~~al~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 304 (397)
.....+++.....+..++|+.. ...++..++.++++++.+.+.|.+ ++++.+..++.. ...++..++. .++.
T Consensus 264 --~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~-~~g~~~~~~p~G--a~Y~~~~i~~~~d~~ 338 (393)
T COG0436 264 --SYLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNE-IGGLSVVKPPEG--AFYLFPKIPELLDSE 338 (393)
T ss_pred --HhcccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHh-cCCeeeccCCCe--eEEEEeecCCCCCHH
Confidence 1112244455555555778755 235666778999999999999999 888888875442 2334455554 5778
Q ss_pred HHHHHhC---CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHH
Q psy8850 305 SLLMAIK---DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 305 ~~~~~l~---~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 373 (397)
++...|. +|.+.||..|.. ..+.++||+++.. +.+++++++++|.++++..
T Consensus 339 ~f~~~Ll~~~gV~v~PG~~Fg~----------------~~g~~~vRis~~~--~~~~l~~a~~rl~~~~~~~ 392 (393)
T COG0436 339 EFAKKLLEEAGVAVVPGSGFGE----------------PPGEGYVRLSLAT--SEETLEEALRRLARFLAEY 392 (393)
T ss_pred HHHHHHHHhCCEEEecccccCC----------------CCCCCeEEEEEec--CHHHHHHHHHHHHHHHHhc
Confidence 8888876 899999987765 1234899999986 5699999999999988764
No 31
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=100.00 E-value=8.4e-33 Score=257.80 Aligned_cols=326 Identities=17% Similarity=0.193 Sum_probs=243.4
Q ss_pred CCCCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCC--cEEEeCChhHHHHHHHHHhHhh
Q psy8850 4 SATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPR--EIIWTSGATESNNLAIKGAAHF 81 (397)
Q Consensus 4 ~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~--~i~~~~g~t~a~~~~l~~l~~~ 81 (397)
.+++.+++.+++++.... .+. .....+..+.+++.+++++|++++ .|++++|+|+++..++.++.
T Consensus 5 p~p~~~~~~~~~~~~~~~----------~~~-~~~~~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~-- 71 (355)
T TIGR03301 5 PGPLSTSATVRDAMLVDW----------CHW-DSEFNDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLV-- 71 (355)
T ss_pred CCCCCCCHHHHHHhhhhc----------cCC-CHHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhcc--
Confidence 345556677777776622 111 122347889999999999999765 57889999999999999987
Q ss_pred hccCCCEEE-EcCCCChhh-HHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcC--CceEEEEecccCcccccccHHH
Q psy8850 82 YKKRGKHII-TVQTEHKSV-LDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS--DTILVSVMLVNNEIGVIQPILE 157 (397)
Q Consensus 82 ~~~~g~~vl-~~~~~~~s~-~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~--~~~~v~~~~~~~~tG~~~~l~~ 157 (397)
.++++++ +.++.|+.. ...... .|.+++.++.+.++.+|++++++.+++ +++++++++++|++|.+.|+++
T Consensus 72 --~~~~~vi~~~~~~~~~~~~~~a~~---~g~~~~~i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~~~~ 146 (355)
T TIGR03301 72 --PRDGKLLVLINGAYGERLAKICEY---LGIPHTDLNFSEYEPPDLNRIEEALAADPDITHVATVHHETTTGILNPLEA 146 (355)
T ss_pred --CCCCeEEEECCCchhhHHHHHHHH---cCCceEEEecCCCCCCCHHHHHHHHHhCCCceEEEEEecCCcccchhHHHH
Confidence 5666655 444545442 222233 399999999887788999999999975 4568888999999999999999
Q ss_pred HHHHHHhcCcEEEEecccccCccccccCcccccEEEecccc-ccCCCCceEEEEecCCCCccccccccCC----------
Q psy8850 158 IGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEAQIHGGG---------- 226 (397)
Q Consensus 158 i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~~s~~K-~~g~~g~g~~~~~~~~~~~~~~~~~~~~---------- 226 (397)
|.++|++||+++|+|+++++|..++++..+++|++++|+|| ++|+.|+|+++++++..+.+........
T Consensus 147 i~~l~~~~~~~livD~~~s~g~~~~~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (355)
T TIGR03301 147 IAKVARSHGAVLIVDAMSSFGAIPIDIEELDVDALIASANKCLEGVPGFGFVIARRDLLEASAGNARSLYLDLYDQWAYM 226 (355)
T ss_pred HHHHHHHcCCEEEEEeccccCCcccchhhcCccEEEecCCcccccCCceeEEEECHHHHHHhhCCCCCceeeHHHHHHHh
Confidence 99999999999999999998888888777789999999999 6788899999999876555431111000
Q ss_pred ccccccCCCCchhHHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecC---C
Q psy8850 227 HEYGLRSGTLATHQIVGMGEAFRLARI-E-MKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF---I 301 (397)
Q Consensus 227 ~~~~~~~~~~~~~~~~~l~~al~~~~~-~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 301 (397)
...+....+++...+.++.++++.+.+ + +++..++++++++++++.|++ + ++.+..++....+.++++.++. .
T Consensus 227 ~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~-~-g~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (355)
T TIGR03301 227 EKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRA-L-GFQPLLPERWQSPIIVSFLYPDDPDF 304 (355)
T ss_pred hhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHH-c-CCeeecCCCCCCCcEEEEECCCCCcc
Confidence 000122346788888888899987754 4 888899999999999999988 4 6665544332333445666654 3
Q ss_pred ChHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHH
Q psy8850 302 EGESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (397)
Q Consensus 302 ~~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 369 (397)
+..++.+.|. |+.+.+|..+. .++|||++..+++.++++++++.|+++
T Consensus 305 ~~~~~~~~l~~~gi~i~~~~~~~--------------------~~~iRis~~~~~~~~~i~~~~~~l~~~ 354 (355)
T TIGR03301 305 DFDDFYQELKERGFVIYPGKLTL--------------------ADTFRIGTIGEIDAADIERLLEAIKDA 354 (355)
T ss_pred hHHHHHHHHHHCCEEEECCcccc--------------------ccEEEEecCCCCCHHHHHHHHHHHHhh
Confidence 4457777776 88887763211 168999998889999999999999875
No 32
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=100.00 E-value=3.7e-34 Score=265.03 Aligned_cols=332 Identities=15% Similarity=0.118 Sum_probs=242.7
Q ss_pred CCCCCCCCHHHHHHHHHHHhhccCCCCCCCcchh---hhHHHHHHHHHHHHHHHhCC-CCCcEEEeCC-hhHHHHHHHHH
Q psy8850 3 YSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYG---WTAEKAIEKARNEVAQLIYA-DPREIIWTSG-ATESNNLAIKG 77 (397)
Q Consensus 3 ~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~la~~~~~-~~~~i~~~~g-~t~a~~~~l~~ 77 (397)
++++++.|+.|++++.+.+.... +++++.+..+ ..+.+.+.++|+.+++++++ ++++++|++| +|+|+++++.+
T Consensus 4 ~pGp~~~p~~V~~a~~~~~~~~~-~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~ 82 (355)
T cd00611 4 SAGPAALPEEVLEQAQKELLDFN-GLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLN 82 (355)
T ss_pred CCCCCCCCHHHHHHHHHHHhhcc-cCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHh
Confidence 57888899999999999987744 7777666666 46668999999999999998 4567999877 99999999999
Q ss_pred hHhhhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCC-C-HHHHHHHhcCCceEEEEecccCcccccccH
Q psy8850 78 AAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLI-T-LSQLEEKICSDTILVSVMLVNNEIGVIQPI 155 (397)
Q Consensus 78 l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~-d-~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l 155 (397)
+... .+++++|++....+.+ ...+++.|.+++.++.+++|.. + ++..+..+++++++|+++|.+|.||...+
T Consensus 83 l~~~-~~~~~~i~~g~~~~~~----~~~a~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~lV~~~h~~t~tG~~~~- 156 (355)
T cd00611 83 LLGD-KGTADYVVTGAWSAKA----AKEAKRYGGVVVIVAAKEEGKYTKIPDVETWDLAPDAAYVHYCSNETIHGVEFD- 156 (355)
T ss_pred cCCC-CCeEEEEECCHHHHHH----HHHHHhcCCCcEEEecccccCCCCCCCHhhcCCCCCCCEEEEeCCcccccEEcc-
Confidence 8621 1256666654332222 3344555999999988755433 4 34444556788999999999999999743
Q ss_pred HHHHHHHHhcCcEEEEecccccCccccccCcccccEEEeccccccCCCCceEEEEecCCCCccccccccCC---c--ccc
Q psy8850 156 LEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGG---H--EYG 230 (397)
Q Consensus 156 ~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~~~~~~~~~---~--~~~ 230 (397)
++++.||+++++|+++++|..++|+..++ +.+.|.||++||+|+|+++++++..+++.+...... . ...
T Consensus 157 ----~i~~~~g~~~~VDa~qs~g~~~idv~~~~--~~~ss~~K~lGP~G~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (355)
T cd00611 157 ----EVPDTGGVPLVADMSSNILSRPIDVSKFG--VIYAGAQKNLGPAGVTVVIVRKDLLGKARKITPSMLNYKTHADNN 230 (355)
T ss_pred ----eecccCCCeEEEEccccccCCCCCHHHhC--EEEeecccccCCCceEEEEECHHHHhhcccCCCCcccHHHHHhcC
Confidence 45566999999999999999999998655 555779998899999999999987766554322111 0 111
Q ss_pred ccCCCCchhHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhhhcCcEE-EeCCCCCCCCceEEEEecCCC-hHHH
Q psy8850 231 LRSGTLATHQIVGMGEAFRLARI--EMKEELKRILFLQKRLYNGLMESIEEIY-INGDMNNRIPHNLNISFNFIE-GESL 306 (397)
Q Consensus 231 ~~~~~~~~~~~~~l~~al~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~ 306 (397)
...+|+|+..++++.++++++.+ +++++.++..++++++++.|++ ++++. ...++..+.+.++.|.+++.. ..++
T Consensus 231 ~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~-~~gl~~~~~~~~~rs~~vvsf~~~~~~l~~~~ 309 (355)
T cd00611 231 SLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDN-SNGFYRGPVDKRARSRMNVPFRLGKEELEKEF 309 (355)
T ss_pred CCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHh-CccccccCCCHHHcCceEEEEEcCChhhhHHH
Confidence 23689999999999999999865 5999999999999999999999 87752 111112233345666666530 1222
Q ss_pred HHHh--CCcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHH
Q psy8850 307 LMAI--KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (397)
Q Consensus 307 ~~~l--~~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 369 (397)
...+ .|++...+.. ..+.+|+|+..++|.+|||+++++|+++
T Consensus 310 ~~~~~r~G~~~~~~~~---------------------~~g~vR~S~~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 310 LKEAEAAGMIGLKGHR---------------------SVGGIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred HHHHHHCCCcccCCCc---------------------ccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 2222 1544322210 1268999999999999999999999884
No 33
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=100.00 E-value=1.6e-32 Score=257.54 Aligned_cols=331 Identities=17% Similarity=0.165 Sum_probs=245.1
Q ss_pred CCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccC
Q psy8850 6 TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKR 85 (397)
Q Consensus 6 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~ 85 (397)
.+|+++++++++.++... +++|.+..+..+....+.+.++++.+++++|++ ++.+++|+++|+.+++.++. ++
T Consensus 29 ~~p~~~~~~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g~~--~~~~~~g~t~a~~~al~~l~----~~ 101 (387)
T PRK09331 29 GGILTPEARKALIEYGDG-YSVCDYCPGRLDQIKKPPIADFHEDLAEFLGMD--EARVTHGAREGKFAVMHSLC----KK 101 (387)
T ss_pred CCCCCHHHHHHHHHHHhc-cCCCcccccccccccChHHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHhc----CC
Confidence 468899999999999854 455543234444555667999999999999986 57889999999999999987 79
Q ss_pred CCEEEEcCCCChhhHHHHHHHhhCCcEEEEecc--CCCCCCCHHHHHHHhcC-------CceEEEEecccCcccccccHH
Q psy8850 86 GKHIITVQTEHKSVLDSIRKLENDGFRVTYLKP--KNNGLITLSQLEEKICS-------DTILVSVMLVNNEIGVIQPIL 156 (397)
Q Consensus 86 g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~--~~~~~~d~~~l~~~i~~-------~~~~v~~~~~~~~tG~~~~l~ 156 (397)
|++|+++.++|.+...++... |.+++.++. ++++.+|++++++++++ ++++|++++++|++|.+.|++
T Consensus 102 gd~Vlv~~~~h~s~~~~~~~~---G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~l~ 178 (387)
T PRK09331 102 GDYVVLDGLAHYTSYVAAERA---GLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLADAK 178 (387)
T ss_pred CCEEEECCCchHHHHHHHHHc---CCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcccccHH
Confidence 999999999999998776555 999999998 66788999999999863 689999999999999999999
Q ss_pred HHHHHHHhcCcEEEEecccccCccccccCcccccEEEecccc-ccCCCCceEEEEecCCCCccccccccCCc-cccccCC
Q psy8850 157 EIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEAQIHGGGH-EYGLRSG 234 (397)
Q Consensus 157 ~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~~s~~K-~~g~~g~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 234 (397)
+|+++|++||+++++|++|+.|..+++...+++|++++|+|| ++++.|+|+++++++....+......... ...+..+
T Consensus 179 ~I~~la~~~g~~livD~a~~~g~~~~~~~~~g~D~~~~s~~K~l~~~~~~G~l~~~~~~i~~~~~~~~~~~~~~~~~~~~ 258 (387)
T PRK09331 179 KVAKVAHEYGIPFLLNGAYTVGRMPVDGKKLGADFIVGSGHKSMAASAPSGVLATTEEYADKVFRTSRKFGVKEVELLGC 258 (387)
T ss_pred HHHHHHHHcCCEEEEECCcccCCcCCCHHHcCCCEEEeeCcccccCCCCEEEEEECHHHHhhcccccCCCcccceeeece
Confidence 999999999999999999999988888888889999999999 66677899999988765554332211100 0001112
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCC---------ChHH
Q psy8850 235 TLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFI---------EGES 305 (397)
Q Consensus 235 ~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~ 305 (397)
+......+++.++++.+.+... ..++..++.+++++.|.+ ++++.+..+.. ....++.+..+.. +...
T Consensus 259 ~~~~~~~~~~~aal~~~~~~~~-~~~~~~~~~~~l~~~L~~-l~g~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~ 335 (387)
T PRK09331 259 TLRGAPLVTLMASFPHVVERVK-RWDEEVKKARWFVDELEK-IEGFKQLGEKP-RNHDLMKFETPSFDEIAKKHKRRGFF 335 (387)
T ss_pred ecCchHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhc-CCCEEEeccCc-CcCCeEEEeCCchhHHhhhccccchh
Confidence 2333344555566666554433 455567788899999999 88998885321 2244544554422 1234
Q ss_pred HHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHH
Q psy8850 306 LLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKK 372 (397)
Q Consensus 306 ~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 372 (397)
+.+.|. ||..... .....+|+.... ++.+|+++++++|++++++
T Consensus 336 ~~~~L~~~gI~~~~~----------------------~~~~i~ri~~~g-~t~~di~~l~~aL~~i~~~ 381 (387)
T PRK09331 336 LYEELKKRGIHGIKP----------------------GATKEFKLSTYG-LTWEQVEYVADAFKEIAEK 381 (387)
T ss_pred HHHHHHHcCceEEcc----------------------CCceEEEEEecc-CCHHHHHHHHHHHHHHHHh
Confidence 666665 5542110 012556776643 6899999999999988765
No 34
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=100.00 E-value=3.1e-33 Score=260.93 Aligned_cols=328 Identities=13% Similarity=0.097 Sum_probs=244.7
Q ss_pred CCCCCCHH-HHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCC-CcEEEeC-ChhHHHHHHHHHhHhh
Q psy8850 5 ATTPIDPR-VVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADP-REIIWTS-GATESNNLAIKGAAHF 81 (397)
Q Consensus 5 ~~~~~~~~-v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~-~~i~~~~-g~t~a~~~~l~~l~~~ 81 (397)
+++.+++. |++++.+.... ..++ +..+.+.++++++.++++++++. ++|+|+. |+|.++++++.++.
T Consensus 19 Gp~~~~~~~v~~a~~~~~~~---~~hr-----~~~f~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l~-- 88 (378)
T PRK03080 19 GPCKKRPGWQLEALADALLG---RSHR-----QKPVKALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSLL-- 88 (378)
T ss_pred CCcCCChHHHHHHHHhhhcc---cCcC-----CHHHHHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhcC--
Confidence 44444555 99999865432 2222 34678899999999999999853 4688875 99999999999986
Q ss_pred hccC-CCEEEEcCCCChhhHHHHHHHhhCCc-EEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHH
Q psy8850 82 YKKR-GKHIITVQTEHKSVLDSIRKLENDGF-RVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIG 159 (397)
Q Consensus 82 ~~~~-g~~vl~~~~~~~s~~~~~~~~~~~g~-~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~ 159 (397)
++ ++.|++ ..+|++.... ....+.|. +++.++.+.++.+|+++++ . ++.|+++|.+|.||.+.|+++|+
T Consensus 89 --~~~~~~vi~-~g~f~~~~~~-~~~~~~g~~~v~~~~~~~g~~~d~~~i~----~-~~~V~~~h~~t~tG~~~pi~~I~ 159 (378)
T PRK03080 89 --GARRVDHLA-WESFGSKWAT-DVVKQLKLEDPRVLEADYGSLPDLSAVD----F-DRDVVFTWNGTTTGVRVPVARWI 159 (378)
T ss_pred --CCCcceEEE-eCHHHHHHHH-HHHhhcCCCCceEeccCCCCCCCHhhcC----C-CCCEEEEecCCccceeccchhhc
Confidence 43 445554 5777774332 11134488 9999988877778877643 2 66799999999999999999999
Q ss_pred HHHHhcCcEEEEecccccCccccccCcccccEEEecccc-ccCCCCceEEEEecCCCCccccccccCC------------
Q psy8850 160 ELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEAQIHGGG------------ 226 (397)
Q Consensus 160 ~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~~s~~K-~~g~~g~g~~~~~~~~~~~~~~~~~~~~------------ 226 (397)
+ |++|+++++|++|++|..++|+.. +|++++|.|| ++||+|+|+++++++..+.+.+...++.
T Consensus 160 ~--~~~g~~~vVDa~qs~G~~pidv~~--iD~~~~s~~K~l~~P~G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 235 (378)
T PRK03080 160 G--ADREGLTICDATSAAFALPLDWSK--LDVYTFSWQKVLGGEGGHGMAILSPRAVERLESYTPARPIPKFFRLTKGGK 235 (378)
T ss_pred c--ccCCCeEEEecccccccCCCCHHH--CcEEEEehhhhCCCCCceEEEEECHHHHHhhhcccCCCCCchhheeccchH
Confidence 9 889999999999999999999985 7999999999 6788999999999987776655433221
Q ss_pred -cccccc---CCCCchhHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCC-CCCCCCceEEEEec
Q psy8850 227 -HEYGLR---SGTLATHQIVGMGEAFRLARI--EMKEELKRILFLQKRLYNGLMESIEEIYINGD-MNNRIPHNLNISFN 299 (397)
Q Consensus 227 -~~~~~~---~~~~~~~~~~~l~~al~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~ 299 (397)
....+. .++++...+.++.++++++.+ +++++.++..++.+++++.|++ ++++.+... +..+.+.++.+.++
T Consensus 236 ~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~-~~~~~~~~~~~~~~s~~i~~~~~~ 314 (378)
T PRK03080 236 AIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAEK-TPWATPLVADPATRSNTSVTLDFV 314 (378)
T ss_pred HhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHh-CCCcccccCCccccCccEEEEEcC
Confidence 011222 355677778888999999976 5899999999999999999998 776666642 22233456677766
Q ss_pred C---CChHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHHH
Q psy8850 300 F---IEGESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKLR 374 (397)
Q Consensus 300 ~---~~~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 374 (397)
+ ....++...+. ++.+..|.++. ..+.+|+|+..+++.+||++++++|++++++++
T Consensus 315 ~~~~~~~~~~~~~l~~~~i~v~~g~~~~-------------------~~~~vRis~~~~~t~~di~~l~~al~~~~~~~~ 375 (378)
T PRK03080 315 DAQAAVDAAAVAKLLRENGAVDIEPYRD-------------------APNGLRIWCGPTVEPADVEALTPWLDWAFERLK 375 (378)
T ss_pred CchHHHHHHHHHHHHHcCCeeccccccC-------------------CCCcEEEecCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 5 12234444443 77776653221 137899999999999999999999999988776
Q ss_pred h
Q psy8850 375 E 375 (397)
Q Consensus 375 ~ 375 (397)
.
T Consensus 376 ~ 376 (378)
T PRK03080 376 A 376 (378)
T ss_pred h
Confidence 4
No 35
>PLN03032 serine decarboxylase; Provisional
Probab=100.00 E-value=2.1e-32 Score=250.71 Aligned_cols=315 Identities=16% Similarity=0.173 Sum_probs=244.8
Q ss_pred CHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcE--EEeCChhHHHHHHHHHhHhhhccCCC
Q psy8850 10 DPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREI--IWTSGATESNNLAIKGAAHFYKKRGK 87 (397)
Q Consensus 10 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i--~~~~g~t~a~~~~l~~l~~~~~~~g~ 87 (397)
...+++++.+++....+||.+ .+..+....+.+.++++++++++|++++++ +||+|||+|+..++.+.... .++.
T Consensus 36 ~~~~~~~~~~~~~~~~gnP~s-~~~~g~~a~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~--~~~~ 112 (374)
T PLN03032 36 DYGELSQLMKYSINNLGDPFI-ESNYGVHSRQFEVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREV--FPDG 112 (374)
T ss_pred ChHHHHHHHHhcccCCCCCcc-cCCCCccHHHHHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHh--CCCc
Confidence 446788888888877899999 888888999999999999999999987765 99999999999888865432 2446
Q ss_pred EEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcC---CceEEEEecccCcccccccHHHHHHHHHh
Q psy8850 88 HIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS---DTILVSVMLVNNEIGVIQPILEIGELCRS 164 (397)
Q Consensus 88 ~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~---~~~~v~~~~~~~~tG~~~~l~~i~~l~~~ 164 (397)
+|+++..+|+|...++..+ |..++.||++++|.+|+++|++++++ +|.+|+++..+|++|.+.|+++|+++|++
T Consensus 113 ~vi~s~~~H~Sv~kaa~~l---g~~~~~V~~d~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idpi~eI~~i~~~ 189 (374)
T PLN03032 113 ILYASRESHYSVFKAARMY---RMEAVKVPTLPSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVDDLDRILRILKE 189 (374)
T ss_pred EEEeCCCceeHHHHHHHHc---CCCCeEeeeCCCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCCHHHHHHHHHH
Confidence 8999999999999998888 78888999999999999999999987 57899999999999999999999999999
Q ss_pred cC-----cEEEEecccccCcccc-------ccCcccccEEEeccccccC-CCCceEEEEecCCCCccc---cccccCCcc
Q psy8850 165 KG-----VIFHCDAAQAVGKIDI-------NIQNYKVDLMSFSAHKIYG-PKGIGALYIRRNPRTRIE---AQIHGGGHE 228 (397)
Q Consensus 165 ~g-----i~livD~a~~~~~~~~-------~~~~~~~d~~~~s~~K~~g-~~g~g~~~~~~~~~~~~~---~~~~~~~~~ 228 (397)
+| +++|+|++++++..++ ++. .++|++++|+||++| |.|+|+++++++....+. +++...
T Consensus 190 ~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~~-~~vDSis~s~HK~~g~P~g~G~ll~r~~~~~~~~~~~~Yl~~~--- 265 (374)
T PLN03032 190 LGYTEDRFYIHCDGALFGLMMPFVSRAPEVTFR-KPIGSVSVSGHKFLGCPMPCGVALTRKKHVKALSQNVEYLNSR--- 265 (374)
T ss_pred hCCCCCCeeEEEEccchhhhhhccCCCcccCCC-cCCcEEEECcccccCCCcCeEEEEEEchhhHhhccCCcccCCC---
Confidence 96 5899999999877664 443 269999999999777 999999999976554332 111111
Q ss_pred ccccCCCCchhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCChHHHH
Q psy8850 229 YGLRSGTLATHQIVGMGEAFRLA-RIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLL 307 (397)
Q Consensus 229 ~~~~~~~~~~~~~~~l~~al~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (397)
..-..|+.+....++++.+++.+ .+++.++.+++.++++++.+.|++ .++.+...+. ...+.|+......+.
T Consensus 266 d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~--~~~~~~~~p~-----~~~V~f~~~~~~~~~ 338 (374)
T PLN03032 266 DATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTE--AGLTCRLNEL-----SSTVVFERPMDEAFI 338 (374)
T ss_pred CCcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHh--CCCcEEECCC-----ceEEEEcCCCcHhHh
Confidence 11123444545566666777765 568999999999999999999998 4666555432 334555533222221
Q ss_pred HHhCCcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHH
Q psy8850 308 MAIKDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 368 (397)
Q Consensus 308 ~~l~~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~ 368 (397)
++-.+.. .++.+|+++....+.+.+|++++.|++
T Consensus 339 ---~~w~l~~------------------------~~~~~hi~vm~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 339 ---KKWQLAC------------------------EGDIAHVVVMPNVTVEKLDEFVEELVE 372 (374)
T ss_pred ---heeeecc------------------------cCCEEEEEECCCCCHHHHHHHHHHHhc
Confidence 1211111 025799999988889999999998875
No 36
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=100.00 E-value=1.2e-32 Score=252.94 Aligned_cols=327 Identities=18% Similarity=0.155 Sum_probs=245.7
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhh---HHHHHHHHHHHHHHHhCCCC-CcEEEeCC-hhHHHHHHHHHhHhhh
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWT---AEKAIEKARNEVAQLIYADP-REIIWTSG-ATESNNLAIKGAAHFY 82 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~la~~~~~~~-~~i~~~~g-~t~a~~~~l~~l~~~~ 82 (397)
.+|..|++++.+++..+. +.+++.+..+.. +.+.++++++.++++++.+. .++++++| ||.|+++++.++.
T Consensus 2 ~~p~~v~~~~~~~~~~~~-~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~--- 77 (349)
T TIGR01364 2 ALPEEVLEQAQKELLNFN-GTGMSVMEISHRSKEFEAVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLL--- 77 (349)
T ss_pred CCCHHHHHHHHHHHhCcc-CCCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcC---
Confidence 578999999999998755 666655544444 44899999999999999843 35777755 9999999999998
Q ss_pred ccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCC----CCCHHHHHHHhcCCceEEEEecccCcccccccHHHH
Q psy8850 83 KKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNG----LITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEI 158 (397)
Q Consensus 83 ~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~----~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i 158 (397)
.+++++++......+... .+.+.+.|. +..+..++.+ .+++++++ +++++++|+++|..|+||+..|
T Consensus 78 -~~~~~~l~i~~G~fg~r~-~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~th~ETstGv~~~---- 148 (349)
T TIGR01364 78 -AEGKVADYIVTGAWSKKA-AKEAKKYGV-VNVVASGKEGNYTKIPDPSTWE--ISEDAAYVHYCANETIHGVEFR---- 148 (349)
T ss_pred -CCCCeEEEEECCHHHHHH-HHHHHHhCC-cEEEeccccCCCCCCCCHHhcC--CCCCCCEEEEcCCCCcccEecc----
Confidence 678888777666655544 344555688 7777754322 45555554 3568999999999999999887
Q ss_pred HHHHHhcCcEEEEecccccCccccccCcccccEEEeccccccCCCCceEEEEecCCCCccccccccCC-----ccccccC
Q psy8850 159 GELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGG-----HEYGLRS 233 (397)
Q Consensus 159 ~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 233 (397)
++++.+++++++|+++++|..++|+..+ |++++|.||++||+|+|+++++++.++++.+...... ......+
T Consensus 149 -~l~~~~~~l~iVDavss~g~~~id~~~~--d~~~~ssqK~lgP~Glg~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (349)
T TIGR01364 149 -ELPDVKNAPLVADMSSNILSRPIDVSKF--GLIYAGAQKNIGPAGLTVVIVRKDLLGRASRITPSMLNYKIHAENDSMY 225 (349)
T ss_pred -eecccCCCeEEEEccccccCccCCHHHc--cEEEEecccccCCCceEEEEECHHHHhhcccCCCCcchHHHHHhcCCCC
Confidence 6777889999999999999999999854 5999999997789999999999987766654322111 0112345
Q ss_pred CCCchhHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCC-CCCCCCceEEEEecCCC-hHHHHHH
Q psy8850 234 GTLATHQIVGMGEAFRLARI--EMKEELKRILFLQKRLYNGLMESIEEIYINGD-MNNRIPHNLNISFNFIE-GESLLMA 309 (397)
Q Consensus 234 ~~~~~~~~~~l~~al~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~ 309 (397)
+|||+..++++.++++++.+ +++++.++..++++++++.|++ ++++..... +..+.+.++.|.+++.. ..++...
T Consensus 226 ~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~-~~gl~~~~~~~~~rs~~v~sf~~~~~~~~~~~~~~ 304 (349)
T TIGR01364 226 NTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDN-SNGFYRNPVDPRNRSRMNVVFTLGNEELEKRFLKE 304 (349)
T ss_pred CCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHh-CCCeeccCCCHHHcCCeEEEEecCChhHhHHHHHH
Confidence 79999999999999999865 5999999999999999999999 877654532 22344456677766431 1344333
Q ss_pred hC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHH
Q psy8850 310 IK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKK 372 (397)
Q Consensus 310 l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 372 (397)
+. |+++.+|.. ..+.+|+|+..+++.+|||+++++|+++.++
T Consensus 305 ~~~~Gi~~~~~~~---------------------~~g~vRvS~~~~nt~edid~l~~al~~~~~~ 348 (349)
T TIGR01364 305 AEERGLVSLKGHR---------------------SVGGMRASIYNAMPLEGVQALVDFMKEFQKK 348 (349)
T ss_pred HHHCCCcccCCcc---------------------ccCeeEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence 32 665544421 1268999999999999999999999987653
No 37
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=100.00 E-value=6.1e-32 Score=253.38 Aligned_cols=328 Identities=18% Similarity=0.184 Sum_probs=246.4
Q ss_pred CCCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhcc
Q psy8850 5 ATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKK 84 (397)
Q Consensus 5 ~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~ 84 (397)
+++++++.+++++.+++....+++.. + ....+...++++++++++|++++++++++|+++++..++.++.....+
T Consensus 28 ~~~~~~~~~~~a~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~la~~~g~~~~~~~~~~ggt~a~~~a~~~~~~~~~~ 102 (371)
T PRK13520 28 MCTEPHPIARKAHEMFLETNLGDPGL--F---PGTAKLEEEAVEMLGELLHLPDAYGYITSGGTEANIQAVRAARNLAKA 102 (371)
T ss_pred eecCchHHHHHHHHHHHhcCCCCccc--C---ccHHHHHHHHHHHHHHHhCCCCCCeEEecCcHHHHHHHHHHHHhhccC
Confidence 46678899999999988764444422 2 134556788999999999998778899999999999998876532113
Q ss_pred CCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHh
Q psy8850 85 RGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRS 164 (397)
Q Consensus 85 ~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~ 164 (397)
++++|++++++|+++....... |.+++.+|.++++.+|+++|++++++++++|++.+++|++|.+.|+++|.++|++
T Consensus 103 ~~~~vl~~~~~h~s~~~~~~~~---g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~vi~~~~~~~tG~~~~l~~I~~l~~~ 179 (371)
T PRK13520 103 EKPNIVVPESAHFSFDKAADML---GVELRRAPLDDDYRVDVKAVEDLIDDNTIGIVGIAGTTELGQVDPIPELSKIALE 179 (371)
T ss_pred CCceEEecCcchHHHHHHHHHc---CceEEEecCCCCCcCCHHHHHHHHhhCCEEEEEEcCCcCCcccCCHHHHHHHHHH
Confidence 5789999999999987766555 8999999998888899999999999888888888889999999999999999999
Q ss_pred cCcEEEEecccccCccc-------cccCcccccEEEeccccc-cCCCCceEEEEecC-CCCccc---cccccCCcccccc
Q psy8850 165 KGVIFHCDAAQAVGKID-------INIQNYKVDLMSFSAHKI-YGPKGIGALYIRRN-PRTRIE---AQIHGGGHEYGLR 232 (397)
Q Consensus 165 ~gi~livD~a~~~~~~~-------~~~~~~~~d~~~~s~~K~-~g~~g~g~~~~~~~-~~~~~~---~~~~~~~~~~~~~ 232 (397)
+|+++++|++|+.+..+ ++....++|++++|.||+ +++.++|+++++++ ....+. +...+.. ....
T Consensus 180 ~g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K~~~a~~~~G~~~~~~~~~~~~l~~~~~~~~~~~--~~~~ 257 (371)
T PRK13520 180 NGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSITIDPHKMGLAPIPAGGILFRDESYLDALAVDTPYLTSKK--QATL 257 (371)
T ss_pred cCCCEEEEecchhHHHHhhcCCCCccccCCCCceEEECCccccCccCCceEEEEcCHHHHHhhcccCccccCCC--Ccce
Confidence 99999999999855432 233345789999999994 55666787776543 333221 1111111 1112
Q ss_pred CCCCchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCChHHHHHHhC
Q psy8850 233 SGTLATHQIVGMGEAFRLAR-IEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAIK 311 (397)
Q Consensus 233 ~~~~~~~~~~~l~~al~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 311 (397)
.|+++...++++.++++.+. ++++++.++..++++++.+.|++ + ++.+...+. .+++.+.++ +..++...|.
T Consensus 258 ~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~---~~~v~~~~~--~~~~v~~~L~ 330 (371)
T PRK13520 258 TGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKE-R-GFEPVIEPV---LNIVAFDDP--NPDEVREKLR 330 (371)
T ss_pred EeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHh-C-CCEEecCCC---ceEEEEecC--CHHHHHHHHH
Confidence 34556666788888888763 46888999999999999999998 5 776333322 345566655 4667777775
Q ss_pred --CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHH
Q psy8850 312 --DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVK 371 (397)
Q Consensus 312 --~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 371 (397)
|+.+.... ..+.+|+++..+++++||+++++.|+++++
T Consensus 331 ~~gi~v~~~~----------------------~~~~iRis~~~~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 331 ERGWRVSVTR----------------------CPEALRIVCMPHVTREHIENFLEDLKEVKK 370 (371)
T ss_pred HCCceeccCC----------------------CCCEEEEEEECCCCHHHHHHHHHHHHHHhh
Confidence 77765421 126799999888999999999999998764
No 38
>PRK06225 aspartate aminotransferase; Provisional
Probab=100.00 E-value=6.7e-32 Score=253.38 Aligned_cols=326 Identities=17% Similarity=0.161 Sum_probs=235.8
Q ss_pred CCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccC
Q psy8850 6 TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKR 85 (397)
Q Consensus 6 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~ 85 (397)
..++++.+.+++.+.+.... ...|.......++++++++++|+++++|++++|+++|+.+++.++. .+
T Consensus 39 ~~~~~~~~~~a~~~~~~~~~--------~~~y~~~~g~~~lr~~ia~~l~~~~~~v~~~~g~t~al~~~~~~~~----~~ 106 (380)
T PRK06225 39 HLGPHEEVREAMIRCIEEGE--------YCKYPPPEGFPELRELILKDLGLDDDEALITAGATESLYLVMRAFL----SP 106 (380)
T ss_pred CCCCCHHHHHHHHHHHhcCC--------CCCCCCCcchHHHHHHHHHhcCCCCCcEEEeCCHHHHHHHHHHHhc----CC
Confidence 34678999999999886411 1112223457889999999999998899999999999999999887 78
Q ss_pred CCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCC---CCCCCHHHHHHHhcCCceEEEEecccCccccccc---HHHHH
Q psy8850 86 GKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN---NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---ILEIG 159 (397)
Q Consensus 86 g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~---~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~---l~~i~ 159 (397)
|++|++++++|..+...+... |.+++.++.+. ++.+|+++++++++++++++++++++||||.+++ +++|.
T Consensus 107 gd~vl~~~p~y~~~~~~~~~~---g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~~~~~~i~ 183 (380)
T PRK06225 107 GDNAVTPDPGYLIIDNFASRF---GAEVIEVPIYSEECNYKLTPELVKENMDENTRLIYLIDPLNPLGSSYTEEEIKEFA 183 (380)
T ss_pred CCEEEEcCCCCcchHHHHHHh---CceEEeeccccccCCccCCHHHHHhhcCCCceEEEEeCCCCCCCcCCCHHHHHHHH
Confidence 999999999998877666666 99999998742 3579999999999999999999999999999887 77889
Q ss_pred HHHHhcCcEEEEeccccc---CccccccCcccccEEEeccccccCCCC--ceEEEEecCCCCccccccccCCccccccCC
Q psy8850 160 ELCRSKGVIFHCDAAQAV---GKIDINIQNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLRSG 234 (397)
Q Consensus 160 ~l~~~~gi~livD~a~~~---~~~~~~~~~~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (397)
++|+++|+++|+|++|.. +..+......+..+++.|++|.+|++| +|+++++++....+.....+ ..
T Consensus 184 ~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RiG~i~~~~~l~~~~~~~~~~-------~~- 255 (380)
T PRK06225 184 EIARDNDAFLLHDCTYRDFAREHTLAAEYAPEHTVTSYSFSKIFGMAGLRIGAVVATPDLIEVVKSIVIN-------DL- 255 (380)
T ss_pred HHHHHCCcEEEEehhHHHHhccCCchhhcCCCCEEEEeechhhcCCccceeEEEecCHHHHHHHHHHHhc-------cc-
Confidence 999999999999999852 111111111245677889999767656 69999987665555443211 11
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecC--CChHHHHHHhC-
Q psy8850 235 TLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF--IEGESLLMAIK- 311 (397)
Q Consensus 235 ~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~- 311 (397)
+.+.....+..++++.....+++..+.++++++.+.+.|++ +++..+...+. .+.++++.++. .+..++...|.
T Consensus 256 ~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~l~~~l~~ 332 (380)
T PRK06225 256 GTNVIAQEAAIAGLKVKDEWIDRIRRTTFKNQKLIKEAVDE-IEGVFLPVYPS--HGNMMVIDISEAGIDPEDLVEYLLE 332 (380)
T ss_pred CCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHh-CcCCccccCCC--CCeEEEEEcccccCCHHHHHHHHHH
Confidence 22333333333445433334556666777778888888887 66643321111 14566677653 46677887775
Q ss_pred -CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHHHh
Q psy8850 312 -DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKLRE 375 (397)
Q Consensus 312 -~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 375 (397)
||.+.+|..|.+ ..+.+++|++++. +++++++++++|+++++++|+
T Consensus 333 ~gi~v~~g~~~~~----------------~~~~~~iR~s~~~--~~e~l~~~~~~l~~~~~~~~~ 379 (380)
T PRK06225 333 RKIFVRQGTYTSK----------------RFGDRYIRVSFSI--PREQVEVFCEEFPDVVETLRT 379 (380)
T ss_pred CCEEEcCCcccCc----------------CCCCceEEEEeCC--CHHHHHHHHHHHHHHHHHhhc
Confidence 899998865432 1123789999975 789999999999999998875
No 39
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=100.00 E-value=5.9e-32 Score=249.61 Aligned_cols=334 Identities=15% Similarity=0.110 Sum_probs=245.7
Q ss_pred CCCCCCCCCHHHHHHHHHHHhhccCCCCCCCc---chhhhHHHHHHHHHHHHHHHhCCCC-CcE-EEeCChhHHHHHHHH
Q psy8850 2 DYSATTPIDPRVVDKMIPYLRVQFGNPASRNH---IYGWTAEKAIEKARNEVAQLIYADP-REI-IWTSGATESNNLAIK 76 (397)
Q Consensus 2 ~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~la~~~~~~~-~~i-~~~~g~t~a~~~~l~ 76 (397)
-++++++.|+.|++++.+.+..+. +.+.+.+ ..+..+.+.+.++++.++++++.+. .++ ++++|||.|+++++.
T Consensus 7 ~~pGP~~~p~~V~~a~~~~~~~~~-~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~ 85 (360)
T PRK05355 7 FSAGPAMLPEEVLEQAQQELLDWN-GSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPM 85 (360)
T ss_pred ccCCCCCCCHHHHHHHHHHhhccc-cCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHH
Confidence 367888999999999999875532 3322222 2244555899999999999999843 344 555788889999999
Q ss_pred HhHhhhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCC-CCCCCHHHHHH-HhcCCceEEEEecccCcccccc-
Q psy8850 77 GAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN-NGLITLSQLEE-KICSDTILVSVMLVNNEIGVIQ- 153 (397)
Q Consensus 77 ~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~-~~~~d~~~l~~-~i~~~~~~v~~~~~~~~tG~~~- 153 (397)
.+. .+|+++++......+... .+.+.+.|.. ..+..+. .+..+..++++ ++++++++|.++|..|+||.+.
T Consensus 86 nl~----~~g~~~l~i~~G~fg~r~-~~~a~~~g~~-~~~~~~~~~g~~~~~~~~~~~l~~~~~~V~~th~eTstGv~~~ 159 (360)
T PRK05355 86 NLL----GGGKKADYVDTGSWSKKA-IKEAKKYGEV-NVAASSEDDGFTYIPPLDEWQLSDDAAYVHYTSNETIDGTEFH 159 (360)
T ss_pred hcC----CCCCeEEEEECCHHHHHH-HHHHHHhCCc-eEEecccccCCCCCCChhhccCCCCCCEEEEccCCCcceEecC
Confidence 998 677777766655555543 3444555765 6666553 56566666666 7888899999999999999998
Q ss_pred cHHHHHHHHHhcCcEEEEecccccCccccccCcccccEEEeccccccCCCCceEEEEecCCCCccccccccCC-----cc
Q psy8850 154 PILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGG-----HE 228 (397)
Q Consensus 154 ~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~~~~~~~~~-----~~ 228 (397)
|+++| +|+++++|+++++|..++|+..+ |++++|.||++||+|+|+++++++..+++.+...+.. ..
T Consensus 160 ~i~~i------~g~l~vVDavss~g~~~idv~~~--d~~~~ssqK~lgP~Glg~l~~s~~~l~~~~~~~~~~~~~~~~~~ 231 (360)
T PRK05355 160 ELPDT------GDVPLVADMSSDILSRPIDVSKF--GLIYAGAQKNIGPAGLTIVIVREDLLGRALPSIPSMLDYKTHAD 231 (360)
T ss_pred ccccc------CCCcEEEEcCccccCccCCHHHc--cEEEEeccccccCCceEEEEECHHHHhhcccCCChHHHHHHHHh
Confidence 66666 89999999999999999999865 6999999997789999999999988777655311100 11
Q ss_pred ccccCCCCchhHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCC-ChHH
Q psy8850 229 YGLRSGTLATHQIVGMGEAFRLARI--EMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFI-EGES 305 (397)
Q Consensus 229 ~~~~~~~~~~~~~~~l~~al~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 305 (397)
....++|+|...++++.++++++.+ +++++.++.+++++++++.|++ ++.+....++..+.+.++.|.+++. ...+
T Consensus 232 ~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~-~~~~~~~~~~~~rs~~v~sf~~~~~~~~~~ 310 (360)
T PRK05355 232 NDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDS-SDFYRNPVAPEDRSRMNVPFTLADEELDKK 310 (360)
T ss_pred cCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHh-CCCcccCCChhhcCCcEEEEEcCChHHHHH
Confidence 2234689999999999999999865 5999999999999999999999 6633332222234456677776653 2233
Q ss_pred HHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHH
Q psy8850 306 LLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKK 372 (397)
Q Consensus 306 ~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 372 (397)
+...+. |+.+..|.. ..+.+|+|+..++|.+|||+++++|+++++.
T Consensus 311 ~~~~~~~~Gi~~~~~~~---------------------~~g~vRiS~~~~nt~eei~~l~~~l~~~~~~ 358 (360)
T PRK05355 311 FLAEAKAAGLVGLKGHR---------------------SVGGMRASIYNAMPLEGVQALVDFMKEFERR 358 (360)
T ss_pred HHHHHHHCCCcccCCCC---------------------ccCcEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 333332 444433210 1278999999999999999999999997754
No 40
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=100.00 E-value=3.7e-31 Score=246.59 Aligned_cols=329 Identities=16% Similarity=0.144 Sum_probs=237.8
Q ss_pred CCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccC
Q psy8850 6 TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKR 85 (397)
Q Consensus 6 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~ 85 (397)
..|..+++++++.++... ++++.+-.+..+....+...++++.+++++|+ +++++++|+++|+.+++.++. ++
T Consensus 10 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~--~~i~~~~g~t~al~~~l~~~~----~~ 82 (361)
T cd06452 10 GGRLTPEARKALIEWGDG-YSVCDFCRGRLDEIEKPPIKDFHHDLAEFLGM--DEARVTPGAREGKFAVMHSLC----EK 82 (361)
T ss_pred CCCCCHHHHHHHHHHhcc-cCCccccccccccccCchHHHHHHHHHHHcCC--ceEEEeCCHHHHHHHHHHHhc----CC
Confidence 456788899998888844 35554323333444456788999999999998 589999999999999999887 78
Q ss_pred CCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCC--CCCHHHHHHHhc-------CCceEEEEecccCcccccccHH
Q psy8850 86 GKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNG--LITLSQLEEKIC-------SDTILVSVMLVNNEIGVIQPIL 156 (397)
Q Consensus 86 g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~--~~d~~~l~~~i~-------~~~~~v~~~~~~~~tG~~~~l~ 156 (397)
|++|+++.++|.+....+... |.+++.++.+.++ .+|+++++++++ +++++|++++++||+|.+.|++
T Consensus 83 gd~Vl~~~~~~~~~~~~~~~~---g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~ 159 (361)
T cd06452 83 GDWVVVDGLAHYTSYVAAERA---GLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAK 159 (361)
T ss_pred CCEEEEcCCcchHHHHHHHhc---CCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHH
Confidence 999999999998887655444 9999999988654 899999999886 3789999999999999999999
Q ss_pred HHHHHHHhcCcEEEEecccccCccccccCcccccEEEecccc-ccCCCCceEEEEecCCCCccccccccCCcc-ccccCC
Q psy8850 157 EIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEAQIHGGGHE-YGLRSG 234 (397)
Q Consensus 157 ~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~~s~~K-~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 234 (397)
+|.++|+++|+++|+|++|+.+..+++...+++|++++|+|| ++++.++|+++++++..+.+......+... .....+
T Consensus 160 ~i~~~~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~~~~~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~ 239 (361)
T cd06452 160 KIAKVCHEYGVPLLLNGAYTVGRMPVSGKELGADFIVGSGHKSMAASAPIGVLATTEEWADIVFRTSQMFKIKEVELLGC 239 (361)
T ss_pred HHHHHHHHcCCeEEEECCcccCCcCCCHHHcCCCEEEecCCccccCCCCeEEEEECHHHHHHHhccccccccceeeeecc
Confidence 999999999999999999998887777777789999999999 555667899999876655543322111100 011123
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCC---------ChHH
Q psy8850 235 TLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFI---------EGES 305 (397)
Q Consensus 235 ~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~ 305 (397)
++.....+++.++++...+.++.+.+ ..++++++++.|++ ++++.++.... ...+++.+..+.. +..+
T Consensus 240 ~~~~~~~~~~~~al~~~~~~~~~~~~-~~~~~~~l~~~L~~-l~g~~v~~~~~-~~~n~~~~~~~~~~~~~~~~~~~~~~ 316 (361)
T cd06452 240 TLRGAPLVTLMASFPHVKERVKRWDE-EVEKARWFVAELEK-IEGIKQLGEKP-KNHDLMFFETPSFDEIAKKHKRRGYF 316 (361)
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhc-CCCeEEECCCC-CCCceEEEEcCCcchhhhhccccchh
Confidence 33334455555667665544443333 34456899999998 88888875322 2244555554421 1235
Q ss_pred HHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHH
Q psy8850 306 LLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKV 370 (397)
Q Consensus 306 ~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~ 370 (397)
+.+.|. ||.+.. + ....++|++... .++++++.++++|+++.
T Consensus 317 ~~~~L~~~gI~~~~-----~-----------------~~~~~~ri~~~g-~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 317 LYSELKKRGIHGIK-----P-----------------GLTRYFKLSTYG-LTWEQVEYVVDAFKEIA 360 (361)
T ss_pred HHHHHHHcCceEEc-----C-----------------CCceEEEEEecC-CCHHHHHHHHHHHHHHh
Confidence 666665 665311 0 012678999843 58999999999998654
No 41
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=100.00 E-value=2.7e-31 Score=232.13 Aligned_cols=324 Identities=16% Similarity=0.183 Sum_probs=257.9
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCC--CCCcEEEeCChhHHHHHHHHHhHhhhcc
Q psy8850 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYA--DPREIIWTSGATESNNLAIKGAAHFYKK 84 (397)
Q Consensus 7 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~--~~~~i~~~~g~t~a~~~~l~~l~~~~~~ 84 (397)
.+.||+|++++.+....- .+.+.+...+....+.++.++.++. .++.|++++|.-.++.++++++. +
T Consensus 37 f~~pp~i~~Al~~rvdhG-------vfGY~~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~~T----~ 105 (388)
T COG1168 37 FPTPPEIIEALRERVDHG-------VFGYPYGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLAIRALT----K 105 (388)
T ss_pred CCCCHHHHHHHHHHHhcC-------CCCCCCCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhHHHHHHHhC----c
Confidence 467899999999998761 3444456667888999999999885 56789999999999999999998 8
Q ss_pred CCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccC-CCC--CCCHHHHHHHhcC-CceEEEEecccCccccccc---HHH
Q psy8850 85 RGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPK-NNG--LITLSQLEEKICS-DTILVSVMLVNNEIGVIQP---ILE 157 (397)
Q Consensus 85 ~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~-~~~--~~d~~~l~~~i~~-~~~~v~~~~~~~~tG~~~~---l~~ 157 (397)
+||.|++..|.|+.+...+..- |-++...|.. +++ .||+++||+++.+ +.+++++++||||||.+.. +.+
T Consensus 106 ~gd~Vvi~tPvY~PF~~~i~~n---~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvwt~eeL~~ 182 (388)
T COG1168 106 PGDGVVIQTPVYPPFYNAIKLN---GRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVWTKEELRK 182 (388)
T ss_pred CCCeeEecCCCchHHHHHHhhc---CcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCCCCCccccHHHHHH
Confidence 9999999999999999998877 8888888886 343 6799999998876 5699999999999999877 678
Q ss_pred HHHHHHhcCcEEEEecccc----cCcccccc-----CcccccEEEeccccccCCCC--ceEEEEecCCC-CccccccccC
Q psy8850 158 IGELCRSKGVIFHCDAAQA----VGKIDINI-----QNYKVDLMSFSAHKIYGPKG--IGALYIRRNPR-TRIEAQIHGG 225 (397)
Q Consensus 158 i~~l~~~~gi~livD~a~~----~~~~~~~~-----~~~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~-~~~~~~~~~~ 225 (397)
|.++|.+||+.||.|++|+ .|.-++.+ ..-+..+.+.|.+|.+...| ++.++++++.. .+....+.
T Consensus 183 i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr~~~~~~l~-- 260 (388)
T COG1168 183 IAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELRAKFLKRLK-- 260 (388)
T ss_pred HHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHHHHHHHHHHHH--
Confidence 9999999999999999997 22222111 11145688899999555444 67777775542 22222111
Q ss_pred CccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecC--CCh
Q psy8850 226 GHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF--IEG 303 (397)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 303 (397)
....+.+|..++.+..+|.+....+++.+.+.++.+++++.+.+.+.+|++.+..+++ .+++++.++. .+.
T Consensus 261 ----~~~~~~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~v~~p~g---TYL~WLD~r~l~l~d 333 (388)
T COG1168 261 ----RNGLHGPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKHLPGVKVTEPQG---TYLAWLDCRELGLDD 333 (388)
T ss_pred ----HhcCCCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEecCCC---ceeeeeeccccCCCh
Confidence 1223468889999999999988889999999999999999999999899999998877 6777888874 455
Q ss_pred HHHHHHhC---CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHH
Q psy8850 304 ESLLMAIK---DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKK 372 (397)
Q Consensus 304 ~~~~~~l~---~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 372 (397)
.++.+.+. +|.+..|..|... +.+++|+.++. +.+-+++++++|+..++.
T Consensus 334 ~~l~~~ll~~akVal~~G~~FG~~-----------------g~gf~RlN~ac--pr~~L~eal~ri~~al~~ 386 (388)
T COG1168 334 SELAEFLLEEAKVALSPGSTFGEE-----------------GSGFVRLNFAC--PRAILEEALERLKRALKK 386 (388)
T ss_pred HHHHHHHHHhhcEeccCCCccCcC-----------------CCceEEEecCC--CHHHHHHHHHHHHHHHhc
Confidence 56666665 8999999877662 24899999985 899999999999977764
No 42
>PRK06207 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.3e-31 Score=251.01 Aligned_cols=326 Identities=15% Similarity=0.127 Sum_probs=233.3
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCC--CC-CcEEEeCChhHHHHHHHHHhHhhhcc
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYA--DP-REIIWTSGATESNNLAIKGAAHFYKK 84 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~--~~-~~i~~~~g~t~a~~~~l~~l~~~~~~ 84 (397)
++|+.+.+++.+.+.... .. .|.......+..+.+.+.+++.+|. ++ ++|++|+|+++|+.+++.++. +
T Consensus 53 ~p~~~~~~~~~~~~~~~~---~~-~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~~~~~~l~----~ 124 (405)
T PRK06207 53 EPTPGAFELFSAGVERGG---VQ-AYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGALFLAVAATV----A 124 (405)
T ss_pred CCCHHHHHHHHHHHhcCC---Cc-cCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHHHHhc----C
Confidence 467888888888775411 01 2222222344556666666777784 55 789999999999999999988 8
Q ss_pred CCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccC-----CCCCCCHHHHHHHhcCCceEEEEecccCccccccc---HH
Q psy8850 85 RGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPK-----NNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---IL 156 (397)
Q Consensus 85 ~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~-----~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~---l~ 156 (397)
+||+|++.+|+|+.+...+..+ |.+++.++.+ .++.+|+++|++++.+++++|++++|+||||.+++ ++
T Consensus 125 ~Gd~Vlv~~P~y~~~~~~~~~~---g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~P~NPTG~~~s~e~l~ 201 (405)
T PRK06207 125 RGDKVAIVQPDYFANRKLVEFF---EGEMVPVQLDYLSADKRAGLDLDQLEEAFKAGVRVFLFSNPNNPAGVVYSAEEIA 201 (405)
T ss_pred CCCEEEEeCCCchhHHHHHHHc---CCEEEEEeccccCcccCCCcCHHHHHHhhhhcCeEEEECCCCCCCCcCCCHHHHH
Confidence 9999999999999988777776 9999999875 24678999999999889999999999999999998 56
Q ss_pred HHHHHHHhcCcEEEEecccccCc----cccccC----cccccEEEeccccccCCCC--ceEEEEecCCCCccccccccCC
Q psy8850 157 EIGELCRSKGVIFHCDAAQAVGK----IDINIQ----NYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGG 226 (397)
Q Consensus 157 ~i~~l~~~~gi~livD~a~~~~~----~~~~~~----~~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~ 226 (397)
+|+++|++||++||+|++|+... ....+. ..+..+++.|++|.++.+| +|+++.+++....+......
T Consensus 202 ~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~~~~l~~~~~~~~~~-- 279 (405)
T PRK06207 202 QIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLGVAFGSPAIIDRMEKLQAI-- 279 (405)
T ss_pred HHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccceEEEEcCHHHHHHHHHHHhH--
Confidence 78889999999999999998321 111111 1234588999999766445 89998887665555432211
Q ss_pred ccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecC--CChH
Q psy8850 227 HEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF--IEGE 304 (397)
Q Consensus 227 ~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 304 (397)
...+ .+.....++..+++.....+++..+++.++++.+.+.|++ ++++.+..+.+ +.++++.++. .+..
T Consensus 280 ----~~~~-~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~-~~~~~~~~p~g---g~fl~~~l~~~~~~~~ 350 (405)
T PRK06207 280 ----VSLR-AAGYSQAVLRTWFSEPDGWMKDRIARHQAIRDDLLRVLRG-VEGVFVRAPQA---GSYLFPRLPRLAVSLH 350 (405)
T ss_pred ----hccC-CCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhc-CCCceecCCCe---eEEEEEeCcccCCCHH
Confidence 1111 2223333444455422223566677778888999999987 66766554433 4566777764 3567
Q ss_pred HHHHHhC---CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHHH
Q psy8850 305 SLLMAIK---DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKLR 374 (397)
Q Consensus 305 ~~~~~l~---~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 374 (397)
++.+.+. ||.+.+|..|.. ...+++||+++. +.+++++.+++|.+++++++
T Consensus 351 ~~~~~l~~~~gV~v~pG~~F~~-----------------~~~~~~Ris~~~--~~~~l~~al~rl~~~l~~~~ 404 (405)
T PRK06207 351 DFVKILRLQAGVIVTPGTEFSP-----------------HTADSIRLNFSQ--DHAAAVAAAERIAQLIERYR 404 (405)
T ss_pred HHHHHHHHhcCEEEeCchHhCC-----------------CCCCeEEEEecC--CHHHHHHHHHHHHHHHHHhh
Confidence 7877773 899999976543 013789999996 68999999999999887664
No 43
>PRK05957 aspartate aminotransferase; Provisional
Probab=100.00 E-value=9.6e-31 Score=245.91 Aligned_cols=326 Identities=16% Similarity=0.155 Sum_probs=235.0
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCC---CCcEEEeCChhHHHHHHHHHhHhhhcc
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYAD---PREIIWTSGATESNNLAIKGAAHFYKK 84 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~---~~~i~~~~g~t~a~~~~l~~l~~~~~~ 84 (397)
++|+.+++++.+.+.... . . .|.......+....+++.+++.+|.. +++|++|+|+++++..++.++. +
T Consensus 40 ~~~~~~~~a~~~~~~~~~--~-~-~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~----~ 111 (389)
T PRK05957 40 PPPPEAIEALNNFLANPE--N-H-KYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMNAILAIT----D 111 (389)
T ss_pred CCCHHHHHHHHHHHhCCC--C-C-CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHHHHHHhc----C
Confidence 578899999988775311 1 1 23333334567777888888888863 5679999999999999998876 7
Q ss_pred CCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCccccccc---HHHHHHH
Q psy8850 85 RGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---ILEIGEL 161 (397)
Q Consensus 85 ~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~---l~~i~~l 161 (397)
+||+|++++|+|..+...+... |.+++.++.+.++.+|++++++++++++++|++++++||||.++| +++|+++
T Consensus 112 ~gd~Vlv~~P~y~~~~~~~~~~---g~~~~~v~~~~~~~~d~~~l~~~i~~~~klv~~~~p~NPtG~~~~~~~~~~i~~~ 188 (389)
T PRK05957 112 PGDEIILNTPYYFNHEMAITMA---GCQPILVPTDDNYQLQPEAIEQAITPKTRAIVTISPNNPTGVVYPEALLRAVNQI 188 (389)
T ss_pred CCCEEEEeCCCCcCHHHHHHhc---CCEEEEeecCCCCCcCHHHHHHhcCcCceEEEEeCCCCCCCcCcCHHHHHHHHHH
Confidence 9999999999998887665554 999999999877789999999999999999999999999999998 7889999
Q ss_pred HHhcCcEEEEecccccCcc------c-ccc-CcccccEEEeccccccCCCC--ceEEEEecCCCCccccccccCCccccc
Q psy8850 162 CRSKGVIFHCDAAQAVGKI------D-INI-QNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGL 231 (397)
Q Consensus 162 ~~~~gi~livD~a~~~~~~------~-~~~-~~~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (397)
|++||++||+|++|..... + ..+ ......+++.|++|.+|.+| +|+++++++..+.+...... .
T Consensus 189 a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~------~ 262 (389)
T PRK05957 189 CAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVIPIHLLEAIKKIQDT------I 262 (389)
T ss_pred HHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccceeEEEecCHHHHHHHHHHHhh------c
Confidence 9999999999999872211 1 111 11134588899999777667 89999887665555443211 1
Q ss_pred cCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcE-EEeCCCCCCCCceEEEEec-CCChHHHHHH
Q psy8850 232 RSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEI-YINGDMNNRIPHNLNISFN-FIEGESLLMA 309 (397)
Q Consensus 232 ~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 309 (397)
.. ..+......+..+++.....+++..+++.++++.+.+.|++ ++++ .+..+.+ +..+++.++ +.++.++.+.
T Consensus 263 ~~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~-~~~~~~~~~~~g---g~~~~~~~~~~~~~~~~~~~ 337 (389)
T PRK05957 263 LI-CPPVVSQYAALGALQVGKSYCQQHLPEIAQVRQILLKSLGQ-LQDRCTLHPANG---AFYCFLKVNTDLNDFELVKQ 337 (389)
T ss_pred cc-CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHh-cCCCccccCCCe---eEEEEEeCCCCCChHHHHHH
Confidence 11 22223333333445432234566777788999999999988 6663 3333222 344566665 4567778777
Q ss_pred hC---CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHH
Q psy8850 310 IK---DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 310 l~---~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 373 (397)
+. ||.+.+|..|... ..+++||+++. .+++++++.+++|.+.++.+
T Consensus 338 l~~~~gv~v~pg~~f~~~-----------------~~~~iRis~~~-~~~~~l~~~~~~l~~~~~~~ 386 (389)
T PRK05957 338 LIREYRVAVIPGTTFGMK-----------------NGCYLRIAYGA-LQKATAKEGIERLVQGLKTI 386 (389)
T ss_pred HHHHCCEEEccchhhCCC-----------------CCCEEEEEEec-CCHHHHHHHHHHHHHHHHhh
Confidence 63 8999999765430 13689999975 47899999999998887654
No 44
>PRK06108 aspartate aminotransferase; Provisional
Probab=100.00 E-value=8.4e-31 Score=246.55 Aligned_cols=322 Identities=16% Similarity=0.126 Sum_probs=231.7
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhC--CCCCcEEEeCChhHHHHHHHHHhHhhhccC
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIY--ADPREIIWTSGATESNNLAIKGAAHFYKKR 85 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~--~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~ 85 (397)
++++.+++++.+.+.... . .|.......+....+.+.+.+.+| +++++|++|+|+++|+.+++.++. ++
T Consensus 37 ~~~~~~~~~~~~~~~~~~----~-~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~----~~ 107 (382)
T PRK06108 37 PTPDFIRDAAAAALADGE----T-FYTHNLGIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLAAQALV----GP 107 (382)
T ss_pred CCCHHHHHHHHHHHhcCC----C-CCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHHHHHHHhc----CC
Confidence 557889999888775411 1 122222223444445555555557 677899999999999999999887 78
Q ss_pred CCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCC---CCCCCHHHHHHHhcCCceEEEEecccCccccccc---HHHHH
Q psy8850 86 GKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN---NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---ILEIG 159 (397)
Q Consensus 86 g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~---~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~---l~~i~ 159 (397)
||.|++++|+|+.+...+... |.+++.+|.+. ++.+|++++++.++++++++++++++||||.+++ +++|+
T Consensus 108 gd~vl~~~p~y~~~~~~~~~~---g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~i~l~~p~NPtG~~~~~~~~~~l~ 184 (382)
T PRK06108 108 GDEVVAVTPLWPNLVAAPKIL---GARVVCVPLDFGGGGWTLDLDRLLAAITPRTRALFINSPNNPTGWTASRDDLRAIL 184 (382)
T ss_pred CCEEEEeCCCccchHHHHHHC---CCEEEEeeCCCCCCCccCCHHHHHHhcCccceEEEEECCCCCCCcccCHHHHHHHH
Confidence 999999999999988777766 99999999863 3468999999999889999999999999999987 57789
Q ss_pred HHHHhcCcEEEEecccccCccc--------cccCc-ccccEEEeccccccCCCC--ceEEEEecCCCCccccccccCCcc
Q psy8850 160 ELCRSKGVIFHCDAAQAVGKID--------INIQN-YKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHE 228 (397)
Q Consensus 160 ~l~~~~gi~livD~a~~~~~~~--------~~~~~-~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~ 228 (397)
++|+++|+++|+|++|+..... .++.. .+..+++.|++|.+|.+| +|+++++++....+.....
T Consensus 185 ~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~~~~~~~~~~----- 259 (382)
T PRK06108 185 AHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAPPALGQVLEKLIE----- 259 (382)
T ss_pred HHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeCCHHHHHHHHHHHH-----
Confidence 9999999999999998743211 11211 135688999999665444 7999998766555543321
Q ss_pred ccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecC-CChHHHH
Q psy8850 229 YGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF-IEGESLL 307 (397)
Q Consensus 229 ~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 307 (397)
+.....+.....+...+++...+.+++..++++++++.+.+.|++ ++++.+..+.+ +.++++.++. .+..++.
T Consensus 260 --~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~p~~---g~~~~~~l~~~~~~~~~~ 333 (382)
T PRK06108 260 --YNTSCVAQFVQRAAVAALDEGEDFVAELVARLRRSRDHLVDALRA-LPGVEVAKPDG---AMYAFFRIPGVTDSLALA 333 (382)
T ss_pred --hcccCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHh-CCCCcccCCCe---eEEEEEeCCCCCCHHHHH
Confidence 111223333334444555543445678888999999999999988 77776665432 3445666654 3556777
Q ss_pred HHh-C--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHH
Q psy8850 308 MAI-K--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVK 371 (397)
Q Consensus 308 ~~l-~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 371 (397)
+.| . ||.+.+|..|.+ ...+++||+++. +++++++++++|.++++
T Consensus 334 ~~ll~~~gV~v~pg~~f~~-----------------~~~~~~Ris~~~--~~~~l~~~l~~l~~~l~ 381 (382)
T PRK06108 334 KRLVDEAGLGLAPGTAFGP-----------------GGEGFLRWCFAR--DPARLDEAVERLRRFLA 381 (382)
T ss_pred HHHHHhCCEEEeCchhhCC-----------------CCCCEEEEEecC--CHHHHHHHHHHHHHHHh
Confidence 766 2 899998865532 123789999997 89999999999988764
No 45
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=100.00 E-value=6.4e-30 Score=238.59 Aligned_cols=329 Identities=16% Similarity=0.155 Sum_probs=228.4
Q ss_pred CCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccC
Q psy8850 6 TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKR 85 (397)
Q Consensus 6 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~ 85 (397)
.+...+.+.+++.++...+.+.+.- .........+...++++.+++++|++ .+.+++|+++++..++.++. ++
T Consensus 17 ~g~~~~~~~~a~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~e~lA~~~g~~--~~~i~~g~~~a~~~~~~~l~----~~ 89 (370)
T TIGR02539 17 GGVLTEAARKALVEFGDGYSVCDFC-GGRLDQITKPPIHDFLEDLAEFLGMD--EARVTHGAREGKFAVMHALC----KE 89 (370)
T ss_pred CCCCcHHHHHHHHHHhhcccccccc-ccccccccchHHHHHHHHHHHHhCCC--ceEEECChHHHHHHHHHHhh----CC
Confidence 3456677788877776532211110 01111112335677888899999997 46678999999999999987 78
Q ss_pred CCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccC--CCCCCCHHHHHHHhcC-------CceEEEEecccCcccccccHH
Q psy8850 86 GKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPK--NNGLITLSQLEEKICS-------DTILVSVMLVNNEIGVIQPIL 156 (397)
Q Consensus 86 g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~i~~-------~~~~v~~~~~~~~tG~~~~l~ 156 (397)
||+|+++.+.|.+....+... |.+++.+|.+ .++.+|++++++++++ ++++|++++++||+|.+.|++
T Consensus 90 gd~Vl~~~~~h~s~~~~~~~~---g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~ 166 (370)
T TIGR02539 90 GDWVVLDGLAHYTSYVAAERA---GLNVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAG 166 (370)
T ss_pred CCEEEECCcccHHHHHHHHHc---CCEEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHH
Confidence 999999999998887655444 9999999986 3578899999999863 678999999999999999999
Q ss_pred HHHHHHHhcCcEEEEecccccCccccccCcccccEEEeccccccC-CCCceEEEEecCCCCccccccccCCccc-cccCC
Q psy8850 157 EIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYG-PKGIGALYIRRNPRTRIEAQIHGGGHEY-GLRSG 234 (397)
Q Consensus 157 ~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~~s~~K~~g-~~g~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 234 (397)
+|.++|+++|+++++|++|+.|..+.+....++|+++.|+||+++ +.++|+++++++.++.+......+.... .+..+
T Consensus 167 ~i~~la~~~~~~livDea~~~g~~~~~~~~~~~di~v~s~sK~~~~~g~~G~l~~~~~~i~~l~~~~~~~~~~~~~~~~~ 246 (370)
T TIGR02539 167 KVAKVCREKGVPLLLNCAYTVGRMPVSAKEIGADFIVGSGHKSMAASGPCGVLGMSEEWEDIVLRKSRYSPVKEVELLGC 246 (370)
T ss_pred HHHHHHHHcCCeEEEECccccCCcCCCHHHcCCCEEEeeCcccccCCCCEEEEEECHHHHhhhcccccCCccceeeeecc
Confidence 999999999999999999998876666655678999999999554 3447999999887776654432211110 01112
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCC---------ChHH
Q psy8850 235 TLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFI---------EGES 305 (397)
Q Consensus 235 ~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~ 305 (397)
+.......++.++++...+.+....+.+.. ++++++.|++ + ++.++.... ...+++.+.++.. ....
T Consensus 247 ~~~~~~~~~~~~al~~~~~~l~~~~~~~~~-~~~l~~~L~~-~-g~~~~~~~~-s~t~~v~~~~~~~~~~~~~~~~~~~~ 322 (370)
T TIGR02539 247 TSRGAPIVTMMASFPHVVERVKRWDEEVKK-TRWFVAELED-I-GFIQLGQKP-KEHDLVKFETPGFHEIAQKHKRRGYF 322 (370)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHh-C-CcEEEccCC-CcCceEEEECCchhHHhhhhccccHH
Confidence 222234444555666544444444444444 5689999998 4 676653211 1245555665532 1235
Q ss_pred HHHHhC--CcE-ecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHH
Q psy8850 306 LLMAIK--DIA-VSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKK 372 (397)
Q Consensus 306 ~~~~l~--~i~-~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 372 (397)
+.+.|. ||. +.++ ..++||+++. ..+++|+++++++|++++++
T Consensus 323 ~~~~L~e~GI~~ir~~-----------------------~~~~iRis~~-~~t~e~i~~l~~~L~~~~~~ 368 (370)
T TIGR02539 323 LYEELKKRGIHGIRSG-----------------------QTKYFKLSVY-GLTKEQVEYVVDSFEEIVEE 368 (370)
T ss_pred HHHHHHhCCCccccCC-----------------------cceEEEEEec-CCCHHHHHHHHHHHHHHHHh
Confidence 666665 664 3321 1268999984 46999999999999988764
No 46
>PRK07324 transaminase; Validated
Probab=100.00 E-value=8e-31 Score=244.78 Aligned_cols=316 Identities=16% Similarity=0.160 Sum_probs=228.3
Q ss_pred CCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhC-CCCCcEEEeCChhHHHHHHHHHhHhhhccCCC
Q psy8850 9 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIY-ADPREIIWTSGATESNNLAIKGAAHFYKKRGK 87 (397)
Q Consensus 9 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~-~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~ 87 (397)
.|+.+ +++.+.+.... .+|.......++++.++++++ +++++|++|+|+++|+.+++.++. ++||
T Consensus 40 ~~~~~-~~~~~~~~~~~---------~~Y~~~~G~~~lr~~ia~~~~~~~~~~vi~t~G~~~al~~~~~~l~----~~gd 105 (373)
T PRK07324 40 AGKNP-EAFYQELGQKK---------LTYGWIEGSPEFKEAVASLYQNVKPENILQTNGATGANFLVLYALV----EPGD 105 (373)
T ss_pred cCcch-HHHHHHHhcCC---------ccCCCCCCCHHHHHHHHHHhcCCChhhEEEcCChHHHHHHHHHHhC----CCCC
Confidence 34556 66666665411 112222356789999999885 677899999999999999999987 7999
Q ss_pred EEEEcCCCChhhHHHHHHHhhCCcEEEEeccCC--CCCCCHHHHHHHhcCCceEEEEecccCccccccc---HHHHHHHH
Q psy8850 88 HIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN--NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---ILEIGELC 162 (397)
Q Consensus 88 ~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~---l~~i~~l~ 162 (397)
+|+++.|+|+.+....+.. |.+++.+|.+. ++.+|+++++++++++++++++++|+||||.+++ +++|+++|
T Consensus 106 ~Vl~~~P~y~~~~~~~~~~---g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~kli~i~~p~NPtG~~~~~~~l~~i~~~a 182 (373)
T PRK07324 106 HVISVYPTYQQLYDIPESL---GAEVDYWQLKEENGWLPDLDELRRLVRPNTKLICINNANNPTGALMDRAYLEEIVEIA 182 (373)
T ss_pred EEEEcCCCchhHHHHHHHc---CCEEEEEecccccCCCCCHHHHHHhCCCCCcEEEEeCCCCCCCCCCCHHHHHHHHHHH
Confidence 9999999999888776666 99999999874 2458999999999999999999999999999999 78899999
Q ss_pred HhcCcEEEEecccccCcc---ccccC-cccccEEEeccccccCCCC--ceEEEEecCCCCccccccccCCccccccCCCC
Q psy8850 163 RSKGVIFHCDAAQAVGKI---DINIQ-NYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTL 236 (397)
Q Consensus 163 ~~~gi~livD~a~~~~~~---~~~~~-~~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (397)
++||+++|+|++|..-.. ..++. ..+..+++.|++|.+|.+| +|+++++++....+...... ...+.+
T Consensus 183 ~~~~~~ii~De~y~~l~~~~~~~s~~~~~~~~I~~~s~SK~~~~~G~RiG~i~~~~~li~~~~~~~~~------~~~~~~ 256 (373)
T PRK07324 183 RSVDAYVLSDEVYRPLDEDGSTPSIADLYEKGISTNSMSKTYSLPGIRVGWIAANEEVIDILRKYRDY------TMICAG 256 (373)
T ss_pred HHCCCEEEEEccccccccCCCCCChhhccCCEEEEecchhhcCCccceeEEEecCHHHHHHHHHHhCc------EEecCC
Confidence 999999999999863211 11111 1234578889999766445 69988876655555433211 011222
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecC-CChHHHHHHhC---C
Q psy8850 237 ATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF-IEGESLLMAIK---D 312 (397)
Q Consensus 237 ~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~---~ 312 (397)
...+.++ ..+++.....++..++.++++++.+.+.|++ .+++.+..+.+ +..+++.++. .+..++...+. |
T Consensus 257 ~~~q~~a-~~~l~~~~~~l~~~~~~~~~~~~~l~~~l~~-~~~~~~~~p~g---g~~~~i~~~~~~~~~~~~~~ll~~~g 331 (373)
T PRK07324 257 VFDDMLA-SLALEHRDAILERNRKIVRTNLAILDEWVAK-EPRVSYVKPKA---VSTSFVKLDVDMPSEDFCLKLLKETG 331 (373)
T ss_pred hHHHHHH-HHHHcCHHHHHHHHHHHHHHHHHHHHHHHhc-CCCceEECCCc---eEEEEEEeCCCCCHHHHHHHHHHhcC
Confidence 2333333 3455543445677778888889999999987 66776665533 2334455542 46677877752 8
Q ss_pred cEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHH
Q psy8850 313 IAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 313 i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 373 (397)
|.+.+|..|.. .+++||+++. +++.+++.+++|+++++++
T Consensus 332 v~v~pg~~F~~-------------------~~~iRis~~~--~~~~l~~~l~rl~~~l~~~ 371 (373)
T PRK07324 332 VLLVPGNRFDL-------------------EGHVRIGYCC--DTETLKKGLKKLSEFLREF 371 (373)
T ss_pred EEEECccccCC-------------------CCeEEEEecC--CHHHHHHHHHHHHHHHHhc
Confidence 99999975532 2789999985 6899999999999988754
No 47
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=2.4e-30 Score=245.24 Aligned_cols=327 Identities=16% Similarity=0.131 Sum_probs=232.3
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhC------CCCCcEEEeCChhHHHHHHHHHhHh
Q psy8850 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIY------ADPREIIWTSGATESNNLAIKGAAH 80 (397)
Q Consensus 7 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~------~~~~~i~~~~g~t~a~~~~l~~l~~ 80 (397)
.++++++++++.+.+..... ..|.......++|++++++++ +++++|++|+|+++|+.+++.++.
T Consensus 68 ~~~~~~~~~a~~~al~~~~~--------~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al~l~~~~l~- 138 (430)
T PLN00145 68 FRTAPEAEDAVAAALRSGKY--------NSYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAIEIIMSVLA- 138 (430)
T ss_pred CCCCHHHHHHHHHHHHcCcC--------CCCCCCccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHHHHHHHHHhc-
Confidence 45678999999988864111 112223356778888888874 466789999999999999999887
Q ss_pred hhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccC--CCCCCCHHHHHHHhcCCceEEEEecccCccccccc---H
Q psy8850 81 FYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPK--NNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---I 155 (397)
Q Consensus 81 ~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~---l 155 (397)
++||+|+++.|.|+.+....... |.+++.+++. .++.+|+++++++++++++++++++|+||||.++| +
T Consensus 139 ---~~Gd~Vlv~~P~y~~y~~~~~~~---g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~P~NPtG~v~~~~~l 212 (430)
T PLN00145 139 ---QPGANILLPRPGYPLYEARAVFS---GLEVRHFDLLPERGWEVDLEGVEALADENTVAMVIINPNNPCGSVYSYEHL 212 (430)
T ss_pred ---CCCCEEEEcCCCCccHHHHHHHc---CCEEEEeeCCcccCCcCCHHHHHHHhCcCceEEEEeCCCCCCCCCCCHHHH
Confidence 79999999999999988776666 8899988864 35679999999999999999999999999999999 6
Q ss_pred HHHHHHHHhcCcEEEEecccccCcc---c-ccc---CcccccEEEeccccccCCCC--ceEEEEec-C-CCCcc--cccc
Q psy8850 156 LEIGELCRSKGVIFHCDAAQAVGKI---D-INI---QNYKVDLMSFSAHKIYGPKG--IGALYIRR-N-PRTRI--EAQI 222 (397)
Q Consensus 156 ~~i~~l~~~~gi~livD~a~~~~~~---~-~~~---~~~~~d~~~~s~~K~~g~~g--~g~~~~~~-~-~~~~~--~~~~ 222 (397)
++|+++|+++|++||+|++|..... + ..+ ......+++.|++|.++.+| +|++++.+ . ..... ...+
T Consensus 213 ~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG~RlG~iv~~~~~~~~~~~~~~~~~ 292 (430)
T PLN00145 213 AKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSISKRWVVPGWRLGWIATCDPNGILKETKVVDSI 292 (430)
T ss_pred HHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcccCcEEEEeccccccCCCCeeEEEEEEecchhhhhhhHHHHHH
Confidence 7888899999999999999873211 1 111 11235688999999655556 78888742 2 21110 0000
Q ss_pred ccCCccccccCCCCchhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecC-
Q psy8850 223 HGGGHEYGLRSGTLATHQIVGMGEAFRL-ARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF- 300 (397)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~l~~al~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~- 300 (397)
.. .......++.....++..+++. ..+.+++..+.++++++.+.+.|++ ++++.+...+.. ...+++.++.
T Consensus 293 ~~----~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~-~~g~~~~~~P~g--a~y~~v~l~~~ 365 (430)
T PLN00145 293 RN----YLNISTDPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKE-IKCITCPHKPEG--SMFVMVKLDLS 365 (430)
T ss_pred HH----HhcccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCCcCCCe--eeEEEeccChh
Confidence 00 0001112334444555456653 2345788889999999999999988 777654422222 3445555542
Q ss_pred ----C-ChHHHHHHhC---CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHH
Q psy8850 301 ----I-EGESLLMAIK---DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKK 372 (397)
Q Consensus 301 ----~-~~~~~~~~l~---~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 372 (397)
. ++.++...|. +|.+.+|..|.. .+++||+++. +.++++..+++|.+++.+
T Consensus 366 ~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~-------------------~~~lRis~~~--~~~~l~~al~rl~~~~~~ 424 (430)
T PLN00145 366 CLSGIKDDMDFCCKLAKEESVVVLPGSALGM-------------------KNWLRITFAI--DPPSLEDGLERLKSFCLR 424 (430)
T ss_pred hcCCCCCHHHHHHHHHHhCCEEEeCccccCC-------------------CCeEEEEeCC--CHHHHHHHHHHHHHHHHH
Confidence 2 3455665443 899999875532 3899999984 789999999999999988
Q ss_pred HHhc
Q psy8850 373 LREL 376 (397)
Q Consensus 373 ~~~~ 376 (397)
+++.
T Consensus 425 ~~~~ 428 (430)
T PLN00145 425 HAKL 428 (430)
T ss_pred hccc
Confidence 8764
No 48
>PRK08960 hypothetical protein; Provisional
Probab=100.00 E-value=1e-30 Score=245.84 Aligned_cols=326 Identities=14% Similarity=0.120 Sum_probs=230.1
Q ss_pred CCCCCCC-CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhC------CCCCcEEEeCChhHHHHH
Q psy8850 1 MDYSATT-PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIY------ADPREIIWTSGATESNNL 73 (397)
Q Consensus 1 ~~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~------~~~~~i~~~~g~t~a~~~ 73 (397)
|+.+.+. ++|+.+++++.+.+.... . .| .......++|+.++++++ +++++|++|+|+++|+.+
T Consensus 37 l~~g~~~~~~~~~v~~a~~~~~~~~~----~-~Y----~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~ 107 (387)
T PRK08960 37 LEIGEPDFTTAEPIVAAGQAALAAGH----T-RY----TAARGLPALREAIAGFYAQRYGVDVDPERILVTPGGSGALLL 107 (387)
T ss_pred eCCCCCCCCCCHHHHHHHHHHHhcCC----C-cc----CCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccCcHHHHHH
Confidence 3445555 568999999998876310 0 12 112345667777777763 678899999999999999
Q ss_pred HHHHhHhhhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCC--CCCCHHHHHHHhcCCceEEEEecccCcccc
Q psy8850 74 AIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNN--GLITLSQLEEKICSDTILVSVMLVNNEIGV 151 (397)
Q Consensus 74 ~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~--~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~ 151 (397)
++.++. ++||+|++++|+|+++...+... |.+++.+|++.+ +.+|+++++++++++++++++++|+||||.
T Consensus 108 ~~~~~~----~~gd~vlv~~p~y~~~~~~~~~~---g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~ 180 (387)
T PRK08960 108 ASSLLV----DPGKHWLLADPGYPCNRHFLRLV---EGAAQLVPVGPDSRYQLTPALVERHWNADTVGALVASPANPTGT 180 (387)
T ss_pred HHHHhc----CCCCEEEEcCCCCcchHHHHHhc---CCeEEEEecCcccCCCCCHHHHHHHhCccceEEEEECCCCCCCc
Confidence 999887 79999999999999999887776 889999998753 468999999999999999999999999999
Q ss_pred cccH---HHHHHHHHhcCcEEEEecccccCcc---ccccCcc-cccEEEeccccccCCCC--ceEEEEecCCCCcccccc
Q psy8850 152 IQPI---LEIGELCRSKGVIFHCDAAQAVGKI---DINIQNY-KVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQI 222 (397)
Q Consensus 152 ~~~l---~~i~~l~~~~gi~livD~a~~~~~~---~~~~~~~-~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~ 222 (397)
++|. ++|+++|++||+++|+|++|..... ...+... ...+++.|++|.+|.+| +|+++++++....+....
T Consensus 181 ~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~~~ 260 (387)
T PRK08960 181 LLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAASVLEVDDDAFVLNSFSKYFGMTGWRLGWLVAPPAAVPELEKLA 260 (387)
T ss_pred CcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhccCCEEEEeecccccCCcccEEEEEEcCHHHHHHHHHHH
Confidence 9995 5677789999999999999863211 1111111 34578899999776556 899999876655544332
Q ss_pred ccCCccccccCCCCchhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecC-
Q psy8850 223 HGGGHEYGLRSGTLATHQIVGMGEAFRL-ARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF- 300 (397)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~l~~al~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~- 300 (397)
.. +..+ .+.....+..++++. ....+.+.++.+.++++.+.+.|++ . ++.+...+.. +.++++.+++
T Consensus 261 ~~------~~~~-~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~-~-~~~~~~~p~g--~~f~~~~~~~~ 329 (387)
T PRK08960 261 QN------LYIS-ASTPAQHAALACFEPETLAILEARRAEFARRRDFLLPALRE-L-GFGIAVEPQG--AFYLYADISAF 329 (387)
T ss_pred hh------hccC-CCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHh-c-CCcCCcCCCe--eEEEEEecccc
Confidence 11 1112 233333333345532 2345677788889999999999988 4 4443222221 4556677764
Q ss_pred -CChHHHHHHh-C--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHH
Q psy8850 301 -IEGESLLMAI-K--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVK 371 (397)
Q Consensus 301 -~~~~~~~~~l-~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 371 (397)
.+..++...+ . ||.+.+|..|... ..+++||++++. +.++++.++++|.+++.
T Consensus 330 ~~~~~~~~~~ll~~~gi~v~pg~~f~~~----------------~~~~~iRi~~~~--~~~~l~~al~~l~~~~~ 386 (387)
T PRK08960 330 GGDAFAFCRHFLETEHVAFTPGLDFGRH----------------QAGQHVRFAYTQ--SLPRLQEAVERIARGLR 386 (387)
T ss_pred CCCHHHHHHHHHHhCCEEEcCchHhCCC----------------CCCCeEEEEecC--CHHHHHHHHHHHHHHHh
Confidence 4567777664 2 8999999766430 113789999995 67888888888877653
No 49
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=100.00 E-value=1.1e-30 Score=242.42 Aligned_cols=282 Identities=21% Similarity=0.182 Sum_probs=220.9
Q ss_pred CcchhhhHHHHHHHHHHHHHHHhCCC--CCcEEEeCChhHHHHHHHHHhHhhhc----------cCCCEEEEcCCCChhh
Q psy8850 32 NHIYGWTAEKAIEKARNEVAQLIYAD--PREIIWTSGATESNNLAIKGAAHFYK----------KRGKHIITVQTEHKSV 99 (397)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~la~~~~~~--~~~i~~~~g~t~a~~~~l~~l~~~~~----------~~g~~vl~~~~~~~s~ 99 (397)
.|..+....+..+++++++++++|.+ ++++++|+|+|+|+.+++.++..... ..+++|++++++|+++
T Consensus 29 ~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~ 108 (345)
T cd06450 29 TWDESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSV 108 (345)
T ss_pred ccccCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHH
Confidence 34555566677888999999999985 44799999999999999998764221 1245889999999999
Q ss_pred HHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcC------CceEEEEecccCcccccccHHHHHHHHHhcCcEEEEec
Q psy8850 100 LDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS------DTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDA 173 (397)
Q Consensus 100 ~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~------~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~ 173 (397)
..++..+ |.+++.+|.++++.+|+++|++++++ +++++++++++|++|.+.|+++|+++|+++|+++|+|+
T Consensus 109 ~~~~~~~---g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD~ 185 (345)
T cd06450 109 EKAAAYL---DVKVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDA 185 (345)
T ss_pred HHHHHHH---hcCeEEeeeCCCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEec
Confidence 8887776 89999999988888999999999987 78899999999999999999999999999999999999
Q ss_pred ccccCccccccC------cccccEEEecccc-ccCCCCceEEEEecCCCCccccccccCCccccccCCCCchhHHHHHHH
Q psy8850 174 AQAVGKIDINIQ------NYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGE 246 (397)
Q Consensus 174 a~~~~~~~~~~~------~~~~d~~~~s~~K-~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 246 (397)
+|+.+..+.+.. ..++|++++|+|| +++|.|+|+++++ .+++.+
T Consensus 186 a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~g~g~~~~~-----------------------------~~~~~~ 236 (345)
T cd06450 186 AYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPLGCSAVLVR-----------------------------ALKLWA 236 (345)
T ss_pred hhhHHHhhChhhHHHhcCccccCEEEEchhHhhCCCcchHHHHHH-----------------------------HHHHHH
Confidence 999776543211 1268999999999 6778888887766 344555
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecC-----CChHHHHHHhC--CcEeccc
Q psy8850 247 AFRLAR-IEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF-----IEGESLLMAIK--DIAVSSG 318 (397)
Q Consensus 247 al~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~--~i~~~~g 318 (397)
+++.+. .+++++.++..++++++.+.|.+ ++++.+..++. ..++.+.++. .+..++.+.|. ++.+.++
T Consensus 237 ~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~---~~iv~f~~~~~~~~~~~~~~i~~~L~~~g~~~~~~ 312 (345)
T cd06450 237 TLRRFGRDGYGEHIDRIVDLAKYLAELIRA-DPGFELLGEPN---LSLVCFRLKPSVKLDELNYDLSDRLNERGGWHVPA 312 (345)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEecCCc---eeEEEEEECCcchhhHHHHHHHHHHHhcCCEEEEe
Confidence 666553 46889999999999999999998 88887765433 4566666654 23456777775 4544433
Q ss_pred CccCCCCCChhhHHHhhCCCccccCceEEEeeCCC-CCHHHHHHHHHHHHH
Q psy8850 319 SACTSASLEPSYVLRALGCNDELAHSSIRFTIGRF-TTEKEIDFTIKLLKM 368 (397)
Q Consensus 319 ~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~-~~~~~i~~~~~~l~~ 368 (397)
..+. ...++|++++.. ++.+|+|+++++|++
T Consensus 313 ~~~~-------------------~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 313 TTLG-------------------GPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred eEEC-------------------CeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 1110 237899999976 499999999999975
No 50
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=100.00 E-value=9.5e-30 Score=238.70 Aligned_cols=322 Identities=18% Similarity=0.204 Sum_probs=235.9
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhh--ccC
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFY--KKR 85 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~--~~~ 85 (397)
.+.+.+.+++..++....+++.. +. ...+...++++.+++++|++++++++++|+++++..++.++.... .++
T Consensus 31 ~~~~~~~~a~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~la~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 105 (373)
T TIGR03812 31 NPHPIAVKAYDMFIETNLGDPGL--FP---GTKKIEEEVVGSLGNLLHLPDAYGYIVSGGTEANIQAVRAAKNLAREEKR 105 (373)
T ss_pred CchHHHHHHHHHHhhcCCCCccc--Cc---cHHHHHHHHHHHHHHHhCCCCCCeEEeccHHHHHHHHHHHHHHHHhccCC
Confidence 35566788888877654444432 21 234667889999999999987788999999999988877654211 135
Q ss_pred CCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhc
Q psy8850 86 GKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSK 165 (397)
Q Consensus 86 g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~ 165 (397)
|++|++++++|.++...++.. |.+++.++.+.++.+|++++++++++++..+++.+++|+||.+.|+++|.++|+++
T Consensus 106 g~~vl~~~~~h~~~~~~~~~~---G~~~~~v~~~~~~~~d~~~l~~~l~~~~~~vv~~~~~~~tG~~~~~~~i~~l~~~~ 182 (373)
T TIGR03812 106 TPNIIVPESAHFSFEKAAEML---GLELRYAPLDEDYTVDVKDVEDLIDDNTIGIVGIAGTTELGQIDDIEELSKIALEN 182 (373)
T ss_pred CcEEEECCcchHHHHHHHHHc---CCeEEEEeeCCCCCcCHHHHHHHHhhCcEEEEEECCCCCCCccCCHHHHHHHHHHc
Confidence 689999999999987776655 99999999988888999999999988875555555789999999999999999999
Q ss_pred CcEEEEecccccCcc----------ccccCcccccEEEeccccc-cCCCCceEEEE-ecCCCCccc---cccccCCcccc
Q psy8850 166 GVIFHCDAAQAVGKI----------DINIQNYKVDLMSFSAHKI-YGPKGIGALYI-RRNPRTRIE---AQIHGGGHEYG 230 (397)
Q Consensus 166 gi~livD~a~~~~~~----------~~~~~~~~~d~~~~s~~K~-~g~~g~g~~~~-~~~~~~~~~---~~~~~~~~~~~ 230 (397)
|+++|+|++|+.+.. .+++...++|++++|+||+ ++|.++|++++ +++....+. +...+.. ..
T Consensus 183 ~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~~~~~G~~~~~~~~~~~~l~~~~~~~~~~~--~~ 260 (373)
T TIGR03812 183 GIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLSPIPAGGILFRSKSYLKYLSVDAPYLTVKK--QA 260 (373)
T ss_pred CCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCCCcCCceEEEEeCHHHHhhhcccCcccCCCC--Cc
Confidence 999999999985542 2333334789999999994 55656665554 544443332 1111110 11
Q ss_pred ccCCCCchhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCChHHHHHH
Q psy8850 231 LRSGTLATHQIVGMGEAFRLA-RIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMA 309 (397)
Q Consensus 231 ~~~~~~~~~~~~~l~~al~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (397)
...|+++...++++.++++.+ .++++++.+++.++++++++.|++ ++...+..+ . .+++.+.++ +..++.+.
T Consensus 261 ~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~-~---~~~v~~~~~--~~~~v~~~ 333 (373)
T TIGR03812 261 TITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKK-IGFEPVIEP-V---LNIVAFEVD--DPEEVRKK 333 (373)
T ss_pred ceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHh-CCCeEEcCC-C---ceEEEEEeC--CHHHHHHH
Confidence 123577777888888899876 457888999999999999999998 643333321 1 345556555 34567777
Q ss_pred hC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHH
Q psy8850 310 IK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 368 (397)
Q Consensus 310 l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~ 368 (397)
|. |+.+.... .++.||++++.+++++|+++++++|++
T Consensus 334 L~~~gi~v~~~~----------------------~~~~iRis~~~~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 334 LRDRGWYVSVTR----------------------CPKALRIVVMPHVTREHIEEFLEDLKE 372 (373)
T ss_pred HHHCCceeccCC----------------------CCCEEEEEEECCCCHHHHHHHHHHHhh
Confidence 75 77765431 137899999999999999999999975
No 51
>PLN02187 rooty/superroot1
Probab=100.00 E-value=4.1e-30 Score=245.19 Aligned_cols=326 Identities=15% Similarity=0.147 Sum_probs=230.3
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhC------CCCCcEEEeCChhHHHHHHHHHhHhh
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIY------ADPREIIWTSGATESNNLAIKGAAHF 81 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~------~~~~~i~~~~g~t~a~~~~l~~l~~~ 81 (397)
++|+++++++.+.+.... .. .| .......++|++++++++ +++++|++|+|+++|+.+++.++.
T Consensus 83 ~~~~~~~~~~~~~~~~~~---~~-~Y----~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~-- 152 (462)
T PLN02187 83 RTCIEAEDAVVDVLRSGK---GN-SY----GPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESLA-- 152 (462)
T ss_pred CCCHHHHHHHHHHHhCCC---CC-CC----CCCCChHHHHHHHHHHHHHhcCCCCCcccEEEeCCHHHHHHHHHHHhc--
Confidence 456789999888876411 11 12 122345667888888773 578899999999999999999988
Q ss_pred hccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccC--CCCCCCHHHHHHHhcCCceEEEEecccCccccccc---HH
Q psy8850 82 YKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPK--NNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---IL 156 (397)
Q Consensus 82 ~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~---l~ 156 (397)
++||+|++++|+|+.+...+... |.+++.++.. +++.+|+++++++++++++++++++|+||||.+++ ++
T Consensus 153 --~pGd~Vlv~~P~y~~y~~~~~~~---g~~~~~~~l~~~~~~~~d~~~l~~~~~~~~~~v~i~nP~NPTG~v~s~e~l~ 227 (462)
T PLN02187 153 --RPNANILLPRPGFPHYDARAAYS---GLEVRKFDLLPEKEWEIDLEGIEAIADENTVAMVVINPNNPCGNVYSHDHLK 227 (462)
T ss_pred --CCCCEEEEeCCCCccHHHHHHHc---CCEEEEEeCccccCCccCHHHHHHhcCCCcEEEEEeCCCCCCCCccCHHHHH
Confidence 89999999999999987776666 9999999874 45679999999999999999999999999999998 67
Q ss_pred HHHHHHHhcCcEEEEecccccCc---cc-cccCcc---cccEEEeccccccCCCC--ceEEEEec-CCC----Ccccccc
Q psy8850 157 EIGELCRSKGVIFHCDAAQAVGK---ID-INIQNY---KVDLMSFSAHKIYGPKG--IGALYIRR-NPR----TRIEAQI 222 (397)
Q Consensus 157 ~i~~l~~~~gi~livD~a~~~~~---~~-~~~~~~---~~d~~~~s~~K~~g~~g--~g~~~~~~-~~~----~~~~~~~ 222 (397)
+|+++|++||++||+|++|.... .+ ..+..+ ...+++.|++|.++.+| +|++++.+ +.. ..+....
T Consensus 228 ~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~pGlRiG~~v~~~p~~~~~~~~~~~~~~ 307 (462)
T PLN02187 228 KVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVPGWKIGWIALNDPEGVFETTKVLQSIK 307 (462)
T ss_pred HHHHHHHHCCCEEEEeccccccccCCCCceeHHHhccCCcEEEEecchhhcCCccceeEEEEecCchhHHHHHHHHHHHH
Confidence 88999999999999999997321 11 111111 23578899999766556 78888743 211 1221111
Q ss_pred ccCCccccccCCCCchhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecC-
Q psy8850 223 HGGGHEYGLRSGTLATHQIVGMGEAFRL-ARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF- 300 (397)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~l~~al~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~- 300 (397)
.. .. ....++.....++.++++. ..+.+++..+.++++++++.+.|++ ++.......+.. +.++++.++.
T Consensus 308 ~~----~~-~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~-~~~~~~~~~P~g--g~fl~~~l~~~ 379 (462)
T PLN02187 308 QN----LD-VTPDPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKD-IPCVVCPKKPES--CTYLLTKLELS 379 (462)
T ss_pred Hh----cc-ccCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhh-CCCCcCCCCCCE--eEEEEeecChh
Confidence 10 00 0112344555555566653 2346788889999999999999998 665432222221 3445554431
Q ss_pred ----C-ChHHHHHHh-C--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHH
Q psy8850 301 ----I-EGESLLMAI-K--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKK 372 (397)
Q Consensus 301 ----~-~~~~~~~~l-~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 372 (397)
. +..++...+ . +|.+.+|..|.. .++|||+++. ++++++..+++|.+++++
T Consensus 380 ~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~-------------------~~~iRis~~~--~~e~l~~al~rL~~~l~~ 438 (462)
T PLN02187 380 LMDNIKDDIDFCVKLAREENLVFLPGDALGL-------------------KNWMRITIGV--EAHMLEDALERLKGFCTR 438 (462)
T ss_pred hCCCCCCHHHHHHHHHhhCCEEEECccccCC-------------------CCeEEEEeCC--CHHHHHHHHHHHHHHHHH
Confidence 2 344554444 3 899999865532 3899999985 689999999999999988
Q ss_pred HHhcC
Q psy8850 373 LRELS 377 (397)
Q Consensus 373 ~~~~~ 377 (397)
+.++.
T Consensus 439 ~~~~~ 443 (462)
T PLN02187 439 HAKKT 443 (462)
T ss_pred hhhcc
Confidence 87655
No 52
>PRK07681 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.7e-30 Score=245.17 Aligned_cols=314 Identities=14% Similarity=0.108 Sum_probs=225.8
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhC------CCC-CcEEEeCChhHHHHHHHHHhHh
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIY------ADP-REIIWTSGATESNNLAIKGAAH 80 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~------~~~-~~i~~~~g~t~a~~~~l~~l~~ 80 (397)
++++.+.+++.+.+.... .+.+ . .....++++.++++++ +++ ++|++|+|+++|+.+++.++.
T Consensus 45 ~~~~~~~~~~~~~~~~~~------~~~y--~-~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~~~- 114 (399)
T PRK07681 45 PPADFVREEMVHTANQKE------SYGY--T-LSGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGLVHLPMVYA- 114 (399)
T ss_pred CCCHHHHHHHHHHHhccc------cCCC--C-CCCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHHHHHHHHHhC-
Confidence 357788888887765311 1111 1 1245566777766663 466 689999999999999999887
Q ss_pred hhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCC--CCCCHHHHHHHhcCCceEEEEecccCccccccc---H
Q psy8850 81 FYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNN--GLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---I 155 (397)
Q Consensus 81 ~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~--~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~---l 155 (397)
++||.|++++|+|+.+...+... |.+++.+|.+++ +.+|++++++++.+++++|++++|+||||.+++ +
T Consensus 115 ---~~Gd~Vlv~~P~y~~~~~~~~~~---G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~P~NPTG~~~s~~~~ 188 (399)
T PRK07681 115 ---NPGDIILVPDPGYTAYETGIQMA---GATSYYMPLKKENDFLPDLELIPEEIADKAKMMILNFPGNPVPAMAHEDFF 188 (399)
T ss_pred ---CCCCEEEECCCCccchHHHHHhc---CCEEEEEecCCCCCCcCCHHHHHHhccccceEEEEeCCCCCcCcCCCHHHH
Confidence 89999999999999998887777 999999999753 467999999998889999999999999999999 5
Q ss_pred HHHHHHHHhcCcEEEEecccccCcc----ccccC----cccccEEEeccccccCCCC--ceEEEEecCCCCccccccccC
Q psy8850 156 LEIGELCRSKGVIFHCDAAQAVGKI----DINIQ----NYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGG 225 (397)
Q Consensus 156 ~~i~~l~~~~gi~livD~a~~~~~~----~~~~~----~~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~ 225 (397)
++|+++|++||++||+|++|+.... ...+. ..+..+++.|++|.+|.+| +|+++.+++..+.+.....
T Consensus 189 ~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i~~~~l~~~~~~~~~-- 266 (399)
T PRK07681 189 KEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMIGNEEIVRALTQFKS-- 266 (399)
T ss_pred HHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecccccCCccceeEEEecCHHHHHHHHHHHh--
Confidence 7788899999999999999973211 11111 1134688899999777556 7999887766555543321
Q ss_pred CccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecC-CChH
Q psy8850 226 GHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF-IEGE 304 (397)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 304 (397)
....+.+.....+...+++.....+++.++.++++++.+.+.|++ . ++.+..+.+ +.++++.++. .+..
T Consensus 267 -----~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~p~~---g~f~~~~l~~~~~~~ 336 (399)
T PRK07681 267 -----NTDYGVFLPIQKAACAALRNGAAFCEKNRGIYQERRDTLVDGFRT-F-GWNVDKPAG---SMFVWAEIPKGWTSL 336 (399)
T ss_pred -----hcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH-C-CCcccCCCe---eeEEEEECCCCCCHH
Confidence 011123333334444555443345677788889999999999998 4 665544433 4566677653 4566
Q ss_pred HHHHHhC---CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHH
Q psy8850 305 SLLMAIK---DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 368 (397)
Q Consensus 305 ~~~~~l~---~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~ 368 (397)
++...+. ||.+.+|..|.. ...+++||+++. +.+++++++++|++
T Consensus 337 ~~~~~l~~~~gv~v~pg~~f~~-----------------~~~~~iRis~~~--~~~~~~~~l~~l~~ 384 (399)
T PRK07681 337 SFAYALMDRANVVVTPGHAFGP-----------------HGEGFVRIALVQ--DEEVLQQAVENIRN 384 (399)
T ss_pred HHHHHHHHhCCEEEeCChhhCc-----------------CCCCeEEEEecC--CHHHHHHHHHHHHH
Confidence 7776663 899999865542 013789999984 68999999999987
No 53
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=100.00 E-value=2.7e-30 Score=239.77 Aligned_cols=307 Identities=18% Similarity=0.198 Sum_probs=228.5
Q ss_pred CCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccC
Q psy8850 6 TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKR 85 (397)
Q Consensus 6 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~ 85 (397)
..++|+.+++++.++......++.. ...++++.+++++++++++|++++|+++++..++.++. ++
T Consensus 30 ~~~~~~~~~~a~~~~~~~~~~y~~~-----------~~~~lr~~ia~~~~~~~~~i~~~~G~~~~l~~~~~~l~----~~ 94 (346)
T TIGR01141 30 PFGPPPKAKEALRAEADKLHRYPDP-----------DPAELKQALADYYGVDPEQILLGNGSDEIIELLIRAFL----EP 94 (346)
T ss_pred CCCCCHHHHHHHHHhHHHhhcCCCC-----------CHHHHHHHHHHHhCcChHHEEEcCCHHHHHHHHHHHhc----CC
Confidence 3457889999999886442211111 12689999999999988899999999999999988887 78
Q ss_pred CCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhc
Q psy8850 86 GKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSK 165 (397)
Q Consensus 86 g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~ 165 (397)
|++|++++++|+.+....... |.+++.++.+.++.+|++++++++.+++++|++++++||||.+.|.+++.++|+.+
T Consensus 95 gd~v~~~~p~y~~~~~~~~~~---g~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~~~~~~l~~~~ 171 (346)
T TIGR01141 95 GDAVLVPPPTYSMYEISAKIH---GAEVVKVPLDEDGQLDLEDILVAIDDKPKLVFLCSPNNPTGNLLSRSDIEAVLERT 171 (346)
T ss_pred CCEEEEcCCCHHHHHHHHHHc---CCeEEEeccCCCCCCCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHHHHHHHHHhC
Confidence 999999999998776555554 99999999988888999999999888999999999999999999999999998877
Q ss_pred --CcEEEEecccccCcc---cccc-CcccccEEEeccccccCCCC--ceEEEEecCCCCccccccccCCccccccCCCCc
Q psy8850 166 --GVIFHCDAAQAVGKI---DINI-QNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLA 237 (397)
Q Consensus 166 --gi~livD~a~~~~~~---~~~~-~~~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (397)
|+++|+|++|+.... ..+. ...+.++++.|++|++|.+| +|+++++++..+.+...... ...+
T Consensus 172 ~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~---------~~~~ 242 (346)
T TIGR01141 172 PEDALVVVDEAYGEFSGEPSTLPLLAEYPNLIVLRTLSKAFGLAGLRIGYAIANAEIIDALNKVRAP---------FNLS 242 (346)
T ss_pred CCCcEEEEECchhhhcCCccHHHHHhhCCCEEEEehhhHhhhchhhhceeeecCHHHHHHHHhccCC---------CCCC
Confidence 999999999872111 1111 11234577899999665445 79999887665555443211 1223
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCChHHHHHHhC--CcEe
Q psy8850 238 THQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAIK--DIAV 315 (397)
Q Consensus 238 ~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~i~~ 315 (397)
.....+..++++... ++.+..+++.++++++++.|.+ ++++.+... . +.++++.++. +..++.+.|. ||.+
T Consensus 243 ~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~-~---g~~~~~~~~~-~~~~~~~~L~~~gI~v 315 (346)
T TIGR01141 243 RLAQAAAIAALRDDD-FIEKTVEEINAERERLYDGLKK-LPGLEVYPS-D---ANFVLIRFPR-DADALFEALLEKGIIV 315 (346)
T ss_pred HHHHHHHHHHhCCHH-HHHHHHHHHHHHHHHHHHHHHh-cCCCEECCC-c---CCEEEEecCC-CHHHHHHHHHHCCeEE
Confidence 333343334444322 5777889999999999999998 777765432 2 4566777765 6677877776 8999
Q ss_pred cccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHH
Q psy8850 316 SSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLK 367 (397)
Q Consensus 316 ~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~ 367 (397)
.+|..|.. . .+++|++++ +++++++++++|+
T Consensus 316 ~~g~~f~~-----------------~-~~~iRls~~---~~~~i~~~~~~l~ 346 (346)
T TIGR01141 316 RDLNSYPG-----------------L-PNCLRITVG---TREENDRFLAALR 346 (346)
T ss_pred EeCCCcCC-----------------C-CCeEEEecC---CHHHHHHHHHHhC
Confidence 98864421 0 388999986 7899999998873
No 54
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.98 E-value=1.6e-30 Score=244.87 Aligned_cols=318 Identities=14% Similarity=0.133 Sum_probs=228.8
Q ss_pred CCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHh----C--CCCCcEEEeCChhHHHHHHHHHhHhhh
Q psy8850 9 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLI----Y--ADPREIIWTSGATESNNLAIKGAAHFY 82 (397)
Q Consensus 9 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~--~~~~~i~~~~g~t~a~~~~l~~l~~~~ 82 (397)
+++.+.+++.+.+.... . .|. ......++++.+++++ | +++++|++|+|+++|+.+++.++.
T Consensus 47 ~~~~~~~~~~~~~~~~~----~-~Y~----~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~--- 114 (391)
T PRK08361 47 TPKNIKEAAKRALDEGW----T-HYT----PNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLAFESLL--- 114 (391)
T ss_pred CCHHHHHHHHHHHhcCC----C-CCC----CCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHHHHHHHHhc---
Confidence 46788888887765311 0 111 1123456666666665 4 567899999999999999999887
Q ss_pred ccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCC--CCCCCHHHHHHHhcCCceEEEEecccCccccccc---HHH
Q psy8850 83 KKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN--NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---ILE 157 (397)
Q Consensus 83 ~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~---l~~ 157 (397)
++|++|++++|+|.++...+... |.+++.+|.+. ++.+|++++++.++++++++++++|+||||.++| +++
T Consensus 115 -~~g~~Vlv~~p~y~~~~~~~~~~---g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~i~~p~NPtG~~~~~~~~~~ 190 (391)
T PRK08361 115 -EEGDEVIIPDPAFVCYVEDAKIA---EAKPIRIPLREENEFQPDPDELLELITKRTRMIVINYPNNPTGATLDKEVAKA 190 (391)
T ss_pred -CCCCEEEEcCCCCcccHHHHHHc---CCEEEEEecCCccCCCCCHHHHHHhcccccEEEEEeCCCCCCCcCcCHHHHHH
Confidence 78999999999999988776666 99999999875 3469999999999999999999999999999999 788
Q ss_pred HHHHHHhcCcEEEEecccccCcc----ccccC--cccccEEEeccccccCCCC--ceEEEEecCCCCccccccccCCccc
Q psy8850 158 IGELCRSKGVIFHCDAAQAVGKI----DINIQ--NYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEY 229 (397)
Q Consensus 158 i~~l~~~~gi~livD~a~~~~~~----~~~~~--~~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~ 229 (397)
|+++|+++++++|+|++|+.... ...+. ..+.++++.|++|.+|.+| +|+++++++....+.....
T Consensus 191 l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlRiG~~~~~~~~~~~~~~~~~------ 264 (391)
T PRK08361 191 IADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMTGWRLGFVIAPEQVIKDMIKLHA------ 264 (391)
T ss_pred HHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEEEecCchhcCCcHhhhhhhccCHHHHHHHHHHHh------
Confidence 89999999999999999873221 11111 1246788999999777557 7999998765554432211
Q ss_pred cccCCCCchhHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecC--CChHH
Q psy8850 230 GLRSGTLATHQIVGMGEAFRLA--RIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF--IEGES 305 (397)
Q Consensus 230 ~~~~~~~~~~~~~~l~~al~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 305 (397)
+..+..+.....++..+++.. .+++++..+.+.++++.+.+.|++ ++++.+..+.+ +.++++.++. .+..+
T Consensus 265 -~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~-~~~~~~~~p~g---~~~~~~~l~~~~~~~~~ 339 (391)
T PRK08361 265 -YIIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKE-MPHIKVFEPKG---AFYVFANIDETGMSSED 339 (391)
T ss_pred -hhccCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHh-CCCCeecCCCE---EEEEEEECCCCCCCHHH
Confidence 001122222333333444321 124677888899999999999998 77776665533 3355666653 46778
Q ss_pred HHHHhC---CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHH
Q psy8850 306 LLMAIK---DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKK 372 (397)
Q Consensus 306 ~~~~l~---~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 372 (397)
+...+. +|.+.+|..|.. ...++|||+++. ++++++..+++|++++++
T Consensus 340 l~~~l~~~~gv~v~pg~~f~~-----------------~~~~~iRi~~~~--~~~~l~~al~~l~~~l~~ 390 (391)
T PRK08361 340 FAEWLLEKARVVVIPGTAFGK-----------------AGEGYIRISYAT--SKEKLIEAMERMEKALEE 390 (391)
T ss_pred HHHHHHHhCCEEEcCchhhCC-----------------CCCCEEEEEecC--CHHHHHHHHHHHHHHHhc
Confidence 877662 899999865532 113789999985 678999999999888754
No 55
>KOG0259|consensus
Probab=99.98 E-value=7e-30 Score=221.57 Aligned_cols=328 Identities=16% Similarity=0.142 Sum_probs=249.6
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhC------CCCCcEEEeCChhHHHHHHHHHhHh
Q psy8850 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIY------ADPREIIWTSGATESNNLAIKGAAH 80 (397)
Q Consensus 7 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~------~~~~~i~~~~g~t~a~~~~l~~l~~ 80 (397)
.++.+.+.+|+.+++++ .-..+|....+...+|++++++++ ..+++|++|+|-++|+++++.++.
T Consensus 77 ~~ts~~a~~Av~~al~S--------gk~N~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe~~i~~LA- 147 (447)
T KOG0259|consen 77 FRTSQEAEQAVVDALRS--------GKGNGYAPSVGILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIELAISSLA- 147 (447)
T ss_pred ccCCHHHHHHHHHHHhc--------CCCCCcCCccccHHHHHHHHHHhhcCCCCccCcCceEEeccchHHHHHHHHHhc-
Confidence 35678999999999987 333345556688899999999965 355689999999999999999998
Q ss_pred hhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccC--CCCCCCHHHHHHHhcCCceEEEEecccCccccccc---H
Q psy8850 81 FYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPK--NNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---I 155 (397)
Q Consensus 81 ~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~---l 155 (397)
+||..|+++.|.|+-+....... |++++.+++- .++.+|++.+|++++++|.++++.+|+||+|.+++ +
T Consensus 148 ---~p~aNILlPrPGfp~Y~~~a~~~---~lEVR~ydlLPe~~weIDL~~veal~DENT~AivviNP~NPcGnVys~~HL 221 (447)
T KOG0259|consen 148 ---NPGANILLPRPGFPLYDTRAIYS---GLEVRYYDLLPEKDWEIDLDGVEALADENTVAIVVINPNNPCGNVYSEDHL 221 (447)
T ss_pred ---CCCCceecCCCCCchHHHhhhhc---CceeEeecccCcccceechHHHHHhhccCeeEEEEeCCCCCCcccccHHHH
Confidence 89999999999999998776666 9999998874 57899999999999999999999999999999998 7
Q ss_pred HHHHHHHHhcCcEEEEecccc---cCcccc-c---cCcccccEEEecccc-ccCCC-CceEEEEecCCCCccccccc-cC
Q psy8850 156 LEIGELCRSKGVIFHCDAAQA---VGKIDI-N---IQNYKVDLMSFSAHK-IYGPK-GIGALYIRRNPRTRIEAQIH-GG 225 (397)
Q Consensus 156 ~~i~~l~~~~gi~livD~a~~---~~~~~~-~---~~~~~~d~~~~s~~K-~~g~~-g~g~~~~~~~~~~~~~~~~~-~~ 225 (397)
++|+++|+++|++||.|++|. +|.-++ . +...-+.+.++|.+| |..|. .+||+++.+..-. ++.... .+
T Consensus 222 ~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPGWRlGWi~~hD~~gv-f~~~~~~q~ 300 (447)
T KOG0259|consen 222 KKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGWRLGWIALHDPRGV-FRDTKVVQG 300 (447)
T ss_pred HHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCceEeecccccccccCCceeeeEEEeccccc-ccchHHHHH
Confidence 899999999999999999997 333322 1 222235678899999 88773 3899998764321 111100 00
Q ss_pred CccccccCCCCchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEec-----
Q psy8850 226 GHEYGLRSGTLATHQIVGMGEAFRLAR-IEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN----- 299 (397)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~l~~al~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----- 299 (397)
..........+++....|+-.-|+-.. +.+.+....++.+++..++.|++ +|++.....+.. +..+++.+.
T Consensus 301 ~~~~~~~~~~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~-IP~l~cp~kPeg--~mylmv~l~~s~~~ 377 (447)
T KOG0259|consen 301 IKNFLDIIPGPATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYSRLKD-IPCLTCPVKPEG--CMYLMVKLNLSLFP 377 (447)
T ss_pred HHHHHhccCCccHhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHHHHhc-CCCcccCcCCCc--ceEEEeccchhhhc
Confidence 000111233566666666766666543 35888899999999999999999 999885554443 334444332
Q ss_pred CC-ChHHHHHHhC---CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHHH
Q psy8850 300 FI-EGESLLMAIK---DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKLR 374 (397)
Q Consensus 300 ~~-~~~~~~~~l~---~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 374 (397)
++ +..++...|. .+.+-||..+.. ++++|++++. +.+.+++++++|++++.+..
T Consensus 378 ~~~dD~dFc~kL~~Eesv~~LPG~af~~-------------------~nw~Ri~i~~--~~~~leea~~Rik~Fc~RH~ 435 (447)
T KOG0259|consen 378 DIEDDVDFCQKLAREESVICLPGQAFGL-------------------KNWLRIVITV--EEEMLEEAFSRIKEFCDRHS 435 (447)
T ss_pred cccccHHHHHHHhhhcceEEeccccccC-------------------CCeEEEEEcc--ChHHHHHHHHHHHHHHHhhh
Confidence 22 3567777775 788888876654 4999999985 78999999999999998887
No 56
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.98 E-value=8.6e-30 Score=245.24 Aligned_cols=333 Identities=18% Similarity=0.145 Sum_probs=229.8
Q ss_pred CCCCCCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhC------CCCCcEEEeCChhHHHHHHH
Q psy8850 2 DYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIY------ADPREIIWTSGATESNNLAI 75 (397)
Q Consensus 2 ~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~------~~~~~i~~~~g~t~a~~~~l 75 (397)
|++++...|..+++++.+.+....... ..|.......++|++++++++ +++++|++|+|+++|+.+++
T Consensus 82 ~~~~~~~~P~~~~~~~~~~~~~~~~~~------~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~ 155 (481)
T PTZ00377 82 DPSVSSLFPADVVARAKEYLNAIGGGT------GAYTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLL 155 (481)
T ss_pred CccccccCCHHHHHHHHHHHHhCCCcc------cCcCcccCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHH
Confidence 344455567888888877665422111 122333456777777777764 56789999999999999999
Q ss_pred HHhHhhhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCC--CCCCCHHHHHHHhcC------CceEEEEecccC
Q psy8850 76 KGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN--NGLITLSQLEEKICS------DTILVSVMLVNN 147 (397)
Q Consensus 76 ~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~~------~~~~v~~~~~~~ 147 (397)
+++.. ++||+|+++.|+|+.+...+... |.+++.+++++ ++.+|+++|++++++ +++++++.+|+|
T Consensus 156 ~~l~~---~~gD~Vlv~~P~y~~y~~~~~~~---g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~N 229 (481)
T PTZ00377 156 QLLIG---DPSDGVMIPIPQYPLYSAAITLL---GGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGN 229 (481)
T ss_pred HHhcc---CCCCEEEECCCCchhHHHHHHHc---CCEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCC
Confidence 98862 48999999999999999888877 99999999874 347899999999875 789998999999
Q ss_pred ccccccc---HHHHHHHHHhcCcEEEEecccccCcc----c-ccc----Cccc-------ccEEEecccc-ccCCCC--c
Q psy8850 148 EIGVIQP---ILEIGELCRSKGVIFHCDAAQAVGKI----D-INI----QNYK-------VDLMSFSAHK-IYGPKG--I 205 (397)
Q Consensus 148 ~tG~~~~---l~~i~~l~~~~gi~livD~a~~~~~~----~-~~~----~~~~-------~d~~~~s~~K-~~g~~g--~ 205 (397)
|||.+++ +++|+++|++||++||+|++|..... + ..+ ..+. ..+++.|++| +++.+| +
T Consensus 230 PTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRi 309 (481)
T PTZ00377 230 PTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRG 309 (481)
T ss_pred CCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCce
Confidence 9999999 67899999999999999999973111 1 111 0111 2467789999 666445 7
Q ss_pred eEEEE---ecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHH
Q psy8850 206 GALYI---RRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRL----------ARIEMKEELKRILFLQKRLYNG 272 (397)
Q Consensus 206 g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~----------~~~~~~~~~~~~~~~~~~l~~~ 272 (397)
|++++ +++..+.+..... ... ..+.....++..+++. +...+.+..++++++++.+.+.
T Consensus 310 G~~~~~~~p~~li~~l~~~~~-------~~~-~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~ 381 (481)
T PTZ00377 310 GYFELTNIPPEVREQIYKLAS-------INL-CSNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDE 381 (481)
T ss_pred EEEEEeCCCHHHHHHHHHHhh-------eec-CCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88876 4444444433221 111 2344444444455531 2334555566788999999999
Q ss_pred HhhhcCcEEEeCCCCCCCCceEEEEec--C----------C-ChHHHHHH-hC--CcEecccCccCCCCCChhhHHHhhC
Q psy8850 273 LMESIEEIYINGDMNNRIPHNLNISFN--F----------I-EGESLLMA-IK--DIAVSSGSACTSASLEPSYVLRALG 336 (397)
Q Consensus 273 l~~~~~~~~~~~~~~~~~~~~~~~~~~--~----------~-~~~~~~~~-l~--~i~~~~g~~~~~~~~~~~~~~~~~g 336 (397)
|++ ++++.+..+.+ +..+++.++ . . +...+... +. ||.+.+|..|...
T Consensus 382 L~~-~~g~~~~~p~g---g~fl~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~------------ 445 (481)
T PTZ00377 382 LNK-IEGVSCQPVEG---AMYAFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFGQK------------ 445 (481)
T ss_pred Hhc-CCCcEeecCCe---eEEEEeeccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccCCC------------
Confidence 998 77887775533 333343332 1 0 12233333 32 8999999766430
Q ss_pred CCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHHHhc
Q psy8850 337 CNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKLREL 376 (397)
Q Consensus 337 ~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~ 376 (397)
.+.+++|++++ .+.+++++++++|.+++++..++
T Consensus 446 ----~~~~~~Rls~~--~~~e~l~~~l~rl~~~~~~~~~~ 479 (481)
T PTZ00377 446 ----PGTYHFRITIL--PPEEQIEEMVKKIKEFHESFMKK 479 (481)
T ss_pred ----CCCCEEEEEEC--CCHHHHHHHHHHHHHHHHHHHHh
Confidence 11368999998 57899999999999998876654
No 57
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.98 E-value=7.6e-30 Score=241.52 Aligned_cols=319 Identities=13% Similarity=0.107 Sum_probs=225.9
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhC------------CCCCcEEEeCChhHHHHHHH
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIY------------ADPREIIWTSGATESNNLAI 75 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~------------~~~~~i~~~~g~t~a~~~~l 75 (397)
.+++.+.+++.+.+... ... .|. ......++|++++++++ +++++|++|+|+++|+.+++
T Consensus 50 ~p~~~~~~a~~~~~~~~---~~~-~Y~----~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~ 121 (412)
T PTZ00433 50 LTPAIQTKALVEAVDSQ---ECN-GYP----PTVGSPEAREAVATYWRNSFVHKESLKSTIKKDNVVLCSGVSHAILMAL 121 (412)
T ss_pred CCCHHHHHHHHHHhhcC---CCC-CCC----CCCCcHHHHHHHHHHHHhhccccccccCCCChhhEEEeCChHHHHHHHH
Confidence 46888999988877641 011 121 12345667777777765 56788999999999999999
Q ss_pred HHhHhhhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCC--CCCCCHHHHHHHhcCCceEEEEecccCcccccc
Q psy8850 76 KGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN--NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQ 153 (397)
Q Consensus 76 ~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~ 153 (397)
.++. ++||+|+++.|+|+.+...+... |.+++.+|.+. ++.+|++++++++++++++|++++++||||.++
T Consensus 122 ~~~~----~~gd~vlv~~P~y~~~~~~~~~~---g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~NPtG~~~ 194 (412)
T PTZ00433 122 TALC----DEGDNILVPAPGFPHYETVCKAY---GIEMRFYNCRPEKDWEADLDEIRRLVDDRTKALIMTNPSNPCGSNF 194 (412)
T ss_pred HHhc----CCCCEEEEccCCcccHHHHHHHc---CCEEEEEecCccccCcCCHHHHHHHhccCceEEEEeCCCCCCCccc
Confidence 9887 79999999999999998887776 99999999863 457999999999988999999999999999998
Q ss_pred c---HHHHHHHHHhcCcEEEEecccccCcc---c-cccCcc---cccEEEeccccccCCCC--ceEEEEe-cC-----CC
Q psy8850 154 P---ILEIGELCRSKGVIFHCDAAQAVGKI---D-INIQNY---KVDLMSFSAHKIYGPKG--IGALYIR-RN-----PR 215 (397)
Q Consensus 154 ~---l~~i~~l~~~~gi~livD~a~~~~~~---~-~~~~~~---~~d~~~~s~~K~~g~~g--~g~~~~~-~~-----~~ 215 (397)
+ +++|+++|+++|++||+|++|..... . ..+..+ ...+++.|++|.+|.+| +|++++. +. ..
T Consensus 195 s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRlG~~i~~~p~~~~~~~~ 274 (412)
T PTZ00433 195 SRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDTTVPRVILGGTAKNLVVPGWRLGWLLLVDPHGNGGDFL 274 (412)
T ss_pred CHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccCCCceEEEccchhhcCCCCeeEEEEEEeCCcccHHHHH
Confidence 8 56778899999999999999873211 1 111111 23477899999665445 7888873 21 11
Q ss_pred CccccccccCCccccccCCCCchhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceE
Q psy8850 216 TRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRL-ARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNL 294 (397)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 294 (397)
..+..... . ....+.....++..++.. ....+++..++++++++.+.+.|++ ..++.+..+.+ +.++
T Consensus 275 ~~~~~~~~-------~-~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~-~~~~~~~~p~g---g~f~ 342 (412)
T PTZ00433 275 DGMKRLGM-------L-VCGPCSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGE-CIGLSPTMPRG---SMFL 342 (412)
T ss_pred HHHHHHhh-------c-cCCCChHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhc-CCCCcccCCCe---eEEE
Confidence 11111110 0 112333333434344442 2345777888999999999999987 55655444332 4455
Q ss_pred EEEecC------CChHHHHHHhC---CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHH
Q psy8850 295 NISFNF------IEGESLLMAIK---DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKL 365 (397)
Q Consensus 295 ~~~~~~------~~~~~~~~~l~---~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~ 365 (397)
++.++. .+..++.+.+. ||.+.+|..|.. .+++||+++. .++++++.+++
T Consensus 343 ~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~-------------------~~~iRis~~~--~~e~l~~al~~ 401 (412)
T PTZ00433 343 MSRLDLEKFRDIKSDVEFYEKLLEEENVQVLPGEIFHM-------------------PGFTRLTISR--PVEVLREAVER 401 (412)
T ss_pred EEEechhhcCCCCCHHHHHHHHHHhcCEEEeCccccCC-------------------CCeEEEEecC--CHHHHHHHHHH
Confidence 666653 14567776653 899999875532 2789999985 58899999999
Q ss_pred HHHHHHHHH
Q psy8850 366 LKMKVKKLR 374 (397)
Q Consensus 366 l~~~~~~~~ 374 (397)
|.+++..++
T Consensus 402 l~~~~~~~~ 410 (412)
T PTZ00433 402 IKAFCERHK 410 (412)
T ss_pred HHHHHHHhc
Confidence 999998765
No 58
>PLN00175 aminotransferase family protein; Provisional
Probab=99.98 E-value=1.5e-29 Score=238.90 Aligned_cols=324 Identities=16% Similarity=0.144 Sum_probs=229.2
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhC--CCCC-cEEEeCChhHHHHHHHHHhHhhhcc
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIY--ADPR-EIIWTSGATESNNLAIKGAAHFYKK 84 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~--~~~~-~i~~~~g~t~a~~~~l~~l~~~~~~ 84 (397)
++|+.+++++.+.+... .. .|.......+..+.+.+.+.+.++ ++++ +|++|+|+++|+.+++.+++ +
T Consensus 67 ~~~~~~~~~~~~~~~~~----~~-~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al~~~~~~l~----~ 137 (413)
T PLN00175 67 DGPDFVKEAAIQAIRDG----KN-QYARGFGVPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAATILGLI----N 137 (413)
T ss_pred CCCHHHHHHHHHHHhcC----CC-CcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHHHHHHHHhC----C
Confidence 34778888888887641 11 232222223333334444444445 3555 69999999999999999887 7
Q ss_pred CCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccC-CCCCCCHHHHHHHhcCCceEEEEecccCccccccc---HHHHHH
Q psy8850 85 RGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPK-NNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---ILEIGE 160 (397)
Q Consensus 85 ~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~-~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~---l~~i~~ 160 (397)
+||+|++.+|.|+.+...+... |.+++.++.+ +++.+|+++|++++.+++++|++++++||||.+++ +++|++
T Consensus 138 ~gd~Vlv~~P~y~~~~~~~~~~---g~~~~~v~~~~~~~~~~~~~l~~~~~~~~k~i~i~~p~NPtG~~~s~~~l~~l~~ 214 (413)
T PLN00175 138 PGDEVILFAPFYDSYEATLSMA---GAKIKTVTLRPPDFAVPEDELKAAFTSKTRAILINTPHNPTGKMFTREELELIAS 214 (413)
T ss_pred CCCEEEEeCCCchhHHHHHHHc---CCEEEEEECCcccCCCCHHHHHHhcCcCceEEEecCCCCCCCcCCCHHHHHHHHH
Confidence 9999999999999998887776 9999999987 35689999999999989999999999999999998 567899
Q ss_pred HHHhcCcEEEEecccccCcc---cc---ccCc-ccccEEEeccccccCCCC--ceEEEEecCCCCccccccccCCccccc
Q psy8850 161 LCRSKGVIFHCDAAQAVGKI---DI---NIQN-YKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGL 231 (397)
Q Consensus 161 l~~~~gi~livD~a~~~~~~---~~---~~~~-~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (397)
+|++||++||+|++|..... +. ++.. .+..+++.|++|.++.+| +|++++++++...+..... .
T Consensus 215 ~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~v~~~~l~~~l~~~~~-------~ 287 (413)
T PLN00175 215 LCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHS-------F 287 (413)
T ss_pred HHHHcCcEEEEecccCccccCCcccChhhCCCCcCcEEEEecchhhccCcchheeeeEeCHHHHHHHHHHHh-------h
Confidence 99999999999999974321 11 1111 245688899999666445 7999988766555433221 1
Q ss_pred cCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEec--CC-ChHHHHH
Q psy8850 232 RSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN--FI-EGESLLM 308 (397)
Q Consensus 232 ~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~ 308 (397)
...+.+.....++..+++.....+++.++.+.++++.+.+.|++ . ++.+..+.+ +.++++.+. +. +..++..
T Consensus 288 ~~~~~s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~p~g---~~f~~~~~~~~~~~~~~~~~~ 362 (413)
T PLN00175 288 LTFATATPMQWAAVAALRAPESYYEELKRDYSAKKDILVEGLKE-V-GFKVYPSSG---TYFVMVDHTPFGFENDIAFCE 362 (413)
T ss_pred ccCCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH-C-CCeecCCCe---eEEEEEeccccCCCCHHHHHH
Confidence 11233334444444666543445788899999999999999998 4 666554432 344566653 23 3567777
Q ss_pred HhC---CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHH
Q psy8850 309 AIK---DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVK 371 (397)
Q Consensus 309 ~l~---~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 371 (397)
.|. ||.+.||..|... ...+.++|||+++. +++++++.+++|+++++
T Consensus 363 ~ll~~~gV~v~pg~~F~~~--------------~~~~~~~iRls~~~--~~e~l~~~~~rL~~~~~ 412 (413)
T PLN00175 363 YLIEEVGVAAIPPSVFYLN--------------PEDGKNLVRFAFCK--DEETLRAAVERMKTKLK 412 (413)
T ss_pred HHHHhCCEEEeCchHhCCC--------------CCCCCCEEEEEEcC--CHHHHHHHHHHHHHHHh
Confidence 663 8999999765420 01123789999984 79999999999998765
No 59
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.98 E-value=1.6e-29 Score=234.43 Aligned_cols=308 Identities=17% Similarity=0.143 Sum_probs=222.7
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCC
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGK 87 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~ 87 (397)
++|+.+++++.+.+.... . . .|. .....++++.+++++++++++|++|+|+++++..++.++. ++||
T Consensus 35 ~~p~~~~~a~~~~~~~~~--~-~-~y~-----~~~~~~lr~~ia~~~~~~~~~i~it~G~~~~l~~~~~~l~----~~gd 101 (351)
T PRK14807 35 ELPEEVIKNIQEIVKSSQ--V-N-IYP-----DPTAEKLREELARYCSVVPTNIFVGNGSDEIIHLIMLAFI----NKGD 101 (351)
T ss_pred CCCHHHHHHHHHHhhcCc--c-c-CCC-----CccHHHHHHHHHHHhCCCcccEEEecCHHHHHHHHHHHhc----CCCC
Confidence 578999999988775311 0 0 111 1234789999999999998999999999999999999887 7999
Q ss_pred EEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcC-CceEEEEecccCcccccccHHHHHHHHHhcC
Q psy8850 88 HIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS-DTILVSVMLVNNEIGVIQPILEIGELCRSKG 166 (397)
Q Consensus 88 ~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~g 166 (397)
+|++++|.|+.+...+... |.+++.++.++++.+|++++++++++ +++++++++++||||.+++.+++.++|++++
T Consensus 102 ~Vlv~~p~y~~~~~~~~~~---g~~~~~v~~~~~~~~d~~~l~~~~~~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~~~ 178 (351)
T PRK14807 102 VVIYPHPSFAMYSVYSKIA---GAVEIPVKLKEDYTYDVGSFIKVIEKYQPKLVFLCNPNNPTGSVIEREDIIKIIEKSR 178 (351)
T ss_pred EEEEeCCChHHHHHHHHHc---CCeEEEeecCCCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC
Confidence 9999999998877666665 99999999987778999999999975 8999999999999999999999999999988
Q ss_pred cEEEEecccccCc--cccc-cCcccccEEEeccccccCCCC--ceEEEEecCCCCccccccccCCccccccCCCCchhHH
Q psy8850 167 VIFHCDAAQAVGK--IDIN-IQNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQI 241 (397)
Q Consensus 167 i~livD~a~~~~~--~~~~-~~~~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (397)
.++|+|++|.... ...+ ....+..+++.|++|.+|.+| +|+++.+++....+...... ...+....
T Consensus 179 ~~~ivDe~y~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~~~~~~~~~~~~~~---------~~~~~~~q 249 (351)
T PRK14807 179 GIVVVDEAYFEFYGNTIVDVINEFENLIVLRTLSKAFGLAGLRVGYAVANENILKYLNLVKSP---------YNINSLSQ 249 (351)
T ss_pred CEEEEeCcchhhcccchHHHhhhCCCEEEEecchHhcccchhceeeeecCHHHHHHHHHccCC---------CCcCHHHH
Confidence 8999999996221 1111 112245688999999666445 78888876655544332111 11223333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCChHHHHHHhC--CcEecccC
Q psy8850 242 VGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAIK--DIAVSSGS 319 (397)
Q Consensus 242 ~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~i~~~~g~ 319 (397)
.++..+++. ..+.+..+++.++++++.+.|++ ++++.+.. ++ +.++++.++ +..++.+.|. ||.+.+..
T Consensus 250 ~~~~~~l~~--~~~~~~~~~~~~~r~~l~~~l~~-~~g~~~~~-~~---~~~~~i~~~--~~~~~~~~l~~~gV~v~~~~ 320 (351)
T PRK14807 250 VIALKVLRT--GVLKERVNYILNERERLIKELSK-IPGIKVYP-SK---TNFILVKFK--DADYVYQGLLERGILVRDFS 320 (351)
T ss_pred HHHHHHHhH--HHHHHHHHHHHHHHHHHHHHHHh-CCCcEECc-CC---ccEEEEEcC--CHHHHHHHHHHCCEEEEECC
Confidence 333344432 24566667788888899999987 77876543 22 345566665 3556666665 88886532
Q ss_pred ccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHH
Q psy8850 320 ACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKV 370 (397)
Q Consensus 320 ~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~ 370 (397)
... ...+++||+++ +.++.+++++.|++++
T Consensus 321 ~~~------------------~~~~~iRis~~---~~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 321 KVE------------------GLEGALRITVS---SCEANDYLINGLKELL 350 (351)
T ss_pred CCC------------------CCCCeEEEEcC---CHHHHHHHHHHHHHhh
Confidence 110 11378999997 5789999999998753
No 60
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.97 E-value=1.2e-29 Score=238.22 Aligned_cols=290 Identities=14% Similarity=0.087 Sum_probs=213.2
Q ss_pred HHHHHHHHHHHh------CCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEe
Q psy8850 43 IEKARNEVAQLI------YADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYL 116 (397)
Q Consensus 43 ~~~~~~~la~~~------~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v 116 (397)
..++++.+++++ ++++++|++|+|+++|+.+++.++. ++||+|++++|+|+.+...+..+ |.+++.+
T Consensus 68 ~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~----~~gd~vlv~~p~y~~~~~~~~~~---g~~~~~~ 140 (384)
T PRK06348 68 DVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLALQSIL----DPGDEVIIHEPYFTPYKDQIEMV---GGKPIIL 140 (384)
T ss_pred cHHHHHHHHHHHHHHhCCCCChhhEEEcCChHHHHHHHHHHhc----CCCCEEEEeCCCCcchHHHHHHc---CCEEEEe
Confidence 445666666665 3577899999999999999999987 79999999999999999888877 8899888
Q ss_pred ccC--CCCCCCHHHHHHHhcCCceEEEEecccCccccccc---HHHHHHHHHhcCcEEEEecccccCcc---ccc---cC
Q psy8850 117 KPK--NNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---ILEIGELCRSKGVIFHCDAAQAVGKI---DIN---IQ 185 (397)
Q Consensus 117 ~~~--~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~---l~~i~~l~~~~gi~livD~a~~~~~~---~~~---~~ 185 (397)
|.. +++.+|++++++++++++++|++++|+||||.+++ +++|.++|++||++||+|++|..... ... +.
T Consensus 141 ~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~ 220 (384)
T PRK06348 141 ETYEEDGFQINVKKLEALITSKTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMATLA 220 (384)
T ss_pred cCCcCcCCcCCHHHHHHhhCcCccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCccchhhcC
Confidence 874 34568999999999889999999999999999998 56788889999999999999873211 111 11
Q ss_pred c-ccccEEEeccccccCCCC--ceEEEEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q psy8850 186 N-YKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRI 262 (397)
Q Consensus 186 ~-~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~ 262 (397)
. .+..+++.|++|.+|.+| +|+++++++....+...... ... +.+.....++..+++.....+++.++.+
T Consensus 221 ~~~~~vi~~~SfSK~~~l~GlRiG~~v~~~~~~~~~~~~~~~------~~~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~ 293 (384)
T PRK06348 221 GMPERTITFGSFSKDFAMTGWRIGYVIAPDYIIETAKIINEG------ICF-SAPTISQRAAIYALKHRDTIVPLIKEEF 293 (384)
T ss_pred CCcCcEEEEecchhccCCccccceeeecCHHHHHHHHHHHHh------ccC-CCCHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 1 235688899999666334 79999886655544433211 011 2333444444456654444567788888
Q ss_pred HHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEec--CCChHHHHHHhC---CcEecccCccCCCCCChhhHHHhhCC
Q psy8850 263 LFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN--FIEGESLLMAIK---DIAVSSGSACTSASLEPSYVLRALGC 337 (397)
Q Consensus 263 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~---~i~~~~g~~~~~~~~~~~~~~~~~g~ 337 (397)
+++++++.+.|++ ++++.+..+.+ +..+++.++ +.+..++...+. ||.+.+|..|..
T Consensus 294 ~~r~~~~~~~L~~-~~~~~~~~p~g---g~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~-------------- 355 (384)
T PRK06348 294 QKRLEYAYKRIES-IPNLSLHPPKG---SIYAFINIKKTGLSSVEFCEKLLKEAHVLVIPGKAFGE-------------- 355 (384)
T ss_pred HHHHHHHHHHHhc-CCCceeccCCe---eEEEEEecccCCCCHHHHHHHHHHhCCEEEcCchhhcc--------------
Confidence 9999999999988 77766554433 345567775 356777777652 899999976532
Q ss_pred CccccCceEEEeeCCCCCHHHHHHHHHHHHHH
Q psy8850 338 NDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (397)
Q Consensus 338 ~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 369 (397)
..+++|||+++ .++++++..+++|+++
T Consensus 356 ---~~~~~iRi~~~--~~~~~l~~al~~l~~~ 382 (384)
T PRK06348 356 ---SGEGYIRLACT--VGIEVLEEAFNRIEKM 382 (384)
T ss_pred ---CCCCeEEEEec--CCHHHHHHHHHHHHhh
Confidence 11378999997 4789999999888754
No 61
>PRK07682 hypothetical protein; Validated
Probab=99.97 E-value=1.3e-29 Score=237.76 Aligned_cols=318 Identities=17% Similarity=0.147 Sum_probs=226.6
Q ss_pred CCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHh----CC--CCC-cEEEeCChhHHHHHHHHHhHhh
Q psy8850 9 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLI----YA--DPR-EIIWTSGATESNNLAIKGAAHF 81 (397)
Q Consensus 9 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~~--~~~-~i~~~~g~t~a~~~~l~~l~~~ 81 (397)
+++.+.+++.+.+.... . .|... ....++|+++++++ |. +++ +|++|+|+++|+.+++.+++
T Consensus 34 ~~~~~~~~~~~~~~~~~----~-~Y~~~----~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~l~-- 102 (378)
T PRK07682 34 TPWNVREASIRSLEQGY----T-SYTAN----AGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDVAMRAII-- 102 (378)
T ss_pred CCHHHHHHHHHHHhcCC----C-CCCCC----CCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhC--
Confidence 45667888877664311 1 12211 23455555555555 44 444 79999999999999999887
Q ss_pred hccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccC--CCCCCCHHHHHHHhcCCceEEEEecccCccccccc---HH
Q psy8850 82 YKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPK--NNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---IL 156 (397)
Q Consensus 82 ~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~---l~ 156 (397)
++||.|++.+|+|+.+...+... |.+++.++.+ +++.+|++++++++.++++++++++|+||||.+++ ++
T Consensus 103 --~~gd~vl~~~p~y~~~~~~~~~~---g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~s~~~~~ 177 (378)
T PRK07682 103 --NPGDEVLIVEPSFVSYAPLVTLA---GGVPVPVATTLENEFKVQPAQIEAAITAKTKAILLCSPNNPTGAVLNKSELE 177 (378)
T ss_pred --CCCCEEEEeCCCchhhHHHHHHc---CCEEEEeecCCccCCCCCHHHHHhhcCcccEEEEEECCCCCcCcCcCHHHHH
Confidence 79999999999999888777766 8898888875 35679999999999989999999999999999988 67
Q ss_pred HHHHHHHhcCcEEEEecccccCccc------cccCc-ccccEEEeccccccCCCC--ceEEEEecCCCCccccccccCCc
Q psy8850 157 EIGELCRSKGVIFHCDAAQAVGKID------INIQN-YKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGH 227 (397)
Q Consensus 157 ~i~~l~~~~gi~livD~a~~~~~~~------~~~~~-~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~ 227 (397)
+|+++|++||+++|+|++|+..... ..+.. .+..+++.|++|.+|.+| +|+++++++..+.+.....
T Consensus 178 ~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~i~~l~~~~~---- 253 (378)
T PRK07682 178 EIAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAPVYFSEAMLKIHQ---- 253 (378)
T ss_pred HHHHHHHHcCcEEEEehhhhhcccCCCCCChhhcccccCCEEEEecCcccccChhhhhhhhhcCHHHHHHHHHHHH----
Confidence 8899999999999999998833211 01111 145688999999776556 8999998776665543321
Q ss_pred cccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEec--CCChHH
Q psy8850 228 EYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN--FIEGES 305 (397)
Q Consensus 228 ~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 305 (397)
+.....+.....+...+++.....+++.+++++++++.+.+.|++ + ++.+..+.+ +..++..++ ..+..+
T Consensus 254 ---~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~-~-~~~~~~p~g---~~~~~~~~~~~~~~~~~ 325 (378)
T PRK07682 254 ---YSMMCAPTMAQFAALEALRAGNDDVIRMRDSYRKRRNFFVTSFNE-I-GLTCHVPGG---AFYAFPSISSTGLSSEE 325 (378)
T ss_pred ---hhccCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHH-C-CCccCCCCe---eEEEEEeccCCCCCHHH
Confidence 111123333334444555433335677888999999999999998 4 655544433 334455553 346677
Q ss_pred HHHHh--C-CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHH
Q psy8850 306 LLMAI--K-DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 306 ~~~~l--~-~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 373 (397)
+...+ + ||.+.+|..|.. ...+++||+++. +.+++++.+++|+++++++
T Consensus 326 ~~~~ll~~~gv~v~pg~~f~~-----------------~~~~~iRis~~~--~~~~l~~~l~~l~~~l~~~ 377 (378)
T PRK07682 326 FAEQLLLEEKVAVVPGSVFGE-----------------SGEGFIRCSYAT--SLEQLQEAMKRMKRFVENK 377 (378)
T ss_pred HHHHHHHhCCEEEcCchhhCc-----------------CCCCeEEEEeCC--CHHHHHHHHHHHHHHHhhc
Confidence 87664 2 899999865532 113889999985 6899999999999988654
No 62
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.97 E-value=2.1e-29 Score=237.95 Aligned_cols=318 Identities=16% Similarity=0.181 Sum_probs=230.4
Q ss_pred CCHHHHHHHHHHHhhc-cCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCC
Q psy8850 9 IDPRVVDKMIPYLRVQ-FGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGK 87 (397)
Q Consensus 9 ~~~~v~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~ 87 (397)
++|++++++.+++... .+++.+ .+..+. .+...++++.+++++|.+ ++++++|+++|+..++.++. ++||
T Consensus 53 ~~~~v~~~~~~~~~~~~~~~~~s-~~~~G~--~~~~~~le~~ia~~~g~~--~~ii~~~~~~a~~~~~~~l~----~~gd 123 (393)
T TIGR01822 53 SHPDLIQAAKDALDEHGFGMSSV-RFICGT--QDIHKELEAKIAAFLGTE--DTILYASCFDANGGLFETLL----GAED 123 (393)
T ss_pred CCHHHHHHHHHHHHHhCCCCCCc-CcccCC--hHHHHHHHHHHHHHhCCC--cEEEECchHHHHHHHHHHhC----CCCC
Confidence 4789999999998774 345555 443332 567788999999999985 56777899999999998886 7999
Q ss_pred EEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcC------CceEEEEecccCcccccccHHHHHHH
Q psy8850 88 HIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS------DTILVSVMLVNNEIGVIQPILEIGEL 161 (397)
Q Consensus 88 ~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~------~~~~v~~~~~~~~tG~~~~l~~i~~l 161 (397)
+|++++++|+++...+... +.+...++ .+|++++++++++ ++++|++++++|+||.+.|+++|+++
T Consensus 124 ~vi~~~~~~~s~~~~~~~~---~~~~~~~~-----~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~l~~i~~l 195 (393)
T TIGR01822 124 AIISDALNHASIIDGVRLC---KAKRYRYA-----NNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIAPLDEICDL 195 (393)
T ss_pred EEEEeccccHHHHHHHHhc---CCceEEeC-----CCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCCHHHHHHH
Confidence 9999999999998887665 44443333 3689999998874 78899999999999999999999999
Q ss_pred HHhcCcEEEEecccccCcccc---------ccCcccccEEEecccc-ccCCCCceEEEEecCCCCccccccccCCccccc
Q psy8850 162 CRSKGVIFHCDAAQAVGKIDI---------NIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGL 231 (397)
Q Consensus 162 ~~~~gi~livD~a~~~~~~~~---------~~~~~~~d~~~~s~~K-~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (397)
|++||+++|+|++|+.|.... +.. .++|++++|+|| +.|+. .|+++++++..+.+...... . .
T Consensus 196 a~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~-~~~di~~~s~sK~l~g~r-~G~~~~~~~~~~~l~~~~~~----~-~ 268 (393)
T TIGR01822 196 ADKYDALVMVDECHATGFLGPTGRGSHELCGVM-GRVDIITGTLGKALGGAS-GGFTTARKEVVELLRQRSRP----Y-L 268 (393)
T ss_pred HHHcCCEEEEECCccccCcCCCCCchHHhcCCC-CCCeEEEEEChHHhhCCC-cEEEEeCHHHHHHHHHhCcc----c-e
Confidence 999999999999998665321 111 257899999999 55554 59998887665555332111 0 1
Q ss_pred cCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecC-CChHHHHHHh
Q psy8850 232 RSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF-IEGESLLMAI 310 (397)
Q Consensus 232 ~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l 310 (397)
..++.+...+.+..++++.+. ..++..+++.++++++.+.|++ . ++.+..+. ..++.+.+.+ .+..++...|
T Consensus 269 ~~~~~~~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~----~~~~~i~~~~~~~~~~l~~~L 341 (393)
T TIGR01822 269 FSNSLPPAVVGASIKVLEMLE-ASNELRDRLWANTRYFRERMEA-A-GFDIKPAD----HPIIPVMLYDAVLAQRFARRL 341 (393)
T ss_pred ecCCCCHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHH-c-CCCCCCCC----CCEEEEEeCCHHHHHHHHHHH
Confidence 123444455555667777653 4567788999999999999988 3 65544221 2344455442 3356677776
Q ss_pred C--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHH
Q psy8850 311 K--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 311 ~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 373 (397)
. ||.+. +..+.. .+.....+|++++.+++++||++++++|+++.+++
T Consensus 342 ~~~gI~v~-~~~~~~---------------~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~~~~ 390 (393)
T TIGR01822 342 LEEGIYVT-GFFYPV---------------VPKGQARIRVQISAAHTEEQLDRAVEAFTRIGREL 390 (393)
T ss_pred HHCCeeEe-eeCCCC---------------CCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence 5 88776 432211 01122569999999999999999999999987654
No 63
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.97 E-value=1.2e-29 Score=236.48 Aligned_cols=304 Identities=17% Similarity=0.140 Sum_probs=226.7
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCC
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGK 87 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~ 87 (397)
.+++.+.+++.+.+......| .....++++++++++++++++|++|+|+++++..++.++. ++||
T Consensus 42 ~~~~~v~~a~~~~~~~~~~~p-----------~~g~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~~~----~~gd 106 (359)
T PRK03158 42 GPSPKVKEAIAAHLDELALYP-----------DGYAPELRTKVAKHLGVDEEQLLFGAGLDEVIQMISRALL----NPGT 106 (359)
T ss_pred CCCHHHHHHHHHHHHHhhcCC-----------CCcHHHHHHHHHHHhCCCHHHEEECCCHHHHHHHHHHHHh----CCCC
Confidence 367889999888765421111 1246789999999999988899999999999999998887 7899
Q ss_pred EEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHh--c
Q psy8850 88 HIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRS--K 165 (397)
Q Consensus 88 ~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~--~ 165 (397)
+|++++|+|+.+...+... |.++..+|.+ ++.+|+++++++++++++++++++|+||||.++|.+++.++++. +
T Consensus 107 ~v~~~~p~y~~~~~~~~~~---g~~~~~~~~~-~~~~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~~~~~~~~ 182 (359)
T PRK03158 107 NTVMAEPTFSQYRHNAIIE---GAEVREVPLK-DGGHDLEAMLKAIDEQTKIVWICNPNNPTGTYVNHEELLSFLESVPS 182 (359)
T ss_pred EEEEcCCCHHHHHHHHHHc---CCeEEEEecC-CCCcCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCC
Confidence 9999999999987776665 9999999987 56789999999998899999999999999999999998888877 5
Q ss_pred CcEEEEecccccCcc----cc--c-cCcccccEEEeccccccCCCC--ceEEEEecCCCCccccccccCCccccccCCCC
Q psy8850 166 GVIFHCDAAQAVGKI----DI--N-IQNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTL 236 (397)
Q Consensus 166 gi~livD~a~~~~~~----~~--~-~~~~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (397)
|+++|+|++|..... +. . ....+..+++.|++|.+|.+| +|+++++++..+.+...... . ..
T Consensus 183 ~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~~~~~~~~~~~--------~-~~ 253 (359)
T PRK03158 183 HVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIASEELIEKLNIARPP--------F-NT 253 (359)
T ss_pred CcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCCHHHHHHHHHhcCC--------C-CC
Confidence 999999999863221 11 1 112246788899999777555 59999887665555433211 1 23
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCChHHHHHHhC--CcE
Q psy8850 237 ATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAIK--DIA 314 (397)
Q Consensus 237 ~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~i~ 314 (397)
+.....++.++++. .+.+++..+.++++++++.+.|++ . ++.+..+ . +.++++.++ .+..++.+.|. ||.
T Consensus 254 ~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~l~~-~-~~~~~~~-~---g~~i~~~~~-~~~~~~~~~l~~~gv~ 325 (359)
T PRK03158 254 TRIAQYAAIAALED-QAFLKECVEKNAEGLEQYYAFCKE-Y-GLFYYPS-Q---TNFIFVDTG-RDANELFEALLKKGYI 325 (359)
T ss_pred CHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHH-C-CCeeCCC-c---CcEEEEECC-CCHHHHHHHHHHCCeE
Confidence 44444444455542 234566777788888899999988 4 6655432 2 345566654 35667777765 999
Q ss_pred ecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHH
Q psy8850 315 VSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (397)
Q Consensus 315 ~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 369 (397)
+.+|..|.. ++++||+++ +.+++++++++|+++
T Consensus 326 v~~g~~f~~-------------------~~~iRi~~~---~~~~~~~l~~al~~~ 358 (359)
T PRK03158 326 VRSGAALGF-------------------PTGVRITIG---LKEQNDKIIELLKEL 358 (359)
T ss_pred EeeCCCCCC-------------------CCeEEEecC---CHHHHHHHHHHHHHh
Confidence 999865431 278999987 699999999999875
No 64
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.97 E-value=9.7e-30 Score=239.11 Aligned_cols=315 Identities=15% Similarity=0.113 Sum_probs=222.3
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHh----CC--CCC-cEEEeCChhHHHHHHHHHhHh
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLI----YA--DPR-EIIWTSGATESNNLAIKGAAH 80 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~~--~~~-~i~~~~g~t~a~~~~l~~l~~ 80 (397)
++++.+.+++.+.+.... .. .|.. .....++|+.+++++ |. +++ +|++|+|+++++..++..+.
T Consensus 42 ~~~~~~~~~~~~~~~~~~---~~-~Y~~----~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~l~~~~~~~~- 112 (383)
T TIGR03540 42 PTPKHIVEALCKAAENPE---NH-RYPS----YEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKEGIAHIPLAFV- 112 (383)
T ss_pred CCCHHHHHHHHHHHhCCC---CC-CCCC----CCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHHHHHHHHHhC-
Confidence 357788888888765310 00 1211 123455566666554 44 444 58899999999999999887
Q ss_pred hhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCC--CCCCHHHHHHHhcCCceEEEEecccCccccccc---H
Q psy8850 81 FYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNN--GLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---I 155 (397)
Q Consensus 81 ~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~--~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~---l 155 (397)
++||+|++++|+|+.+...++.+ |.+++.+|.+.+ ..+|++++++++.+++++|++++|+||||.+++ +
T Consensus 113 ---~~gd~vlv~~P~y~~~~~~~~~~---G~~v~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~i~~P~NPtG~~~~~~~~ 186 (383)
T TIGR03540 113 ---NPGDIVLVPDPGYPVYRIGTLFA---GGEPYEMPLKEENGFLPDFDAIPEDIAKKAKLMFINYPNNPTGAVAPLKFF 186 (383)
T ss_pred ---CCCCEEEEeCCCCcchHHHHHhc---CCEEEEEecCcccCCccCHHHHHhhccccceEEEEeCCCCCcCccCCHHHH
Confidence 79999999999999998887776 999999998743 457999999999889999999999999999999 5
Q ss_pred HHHHHHHHhcCcEEEEecccccCc----cccccCc----ccccEEEeccccccCCCC--ceEEEEecCCCCccccccccC
Q psy8850 156 LEIGELCRSKGVIFHCDAAQAVGK----IDINIQN----YKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGG 225 (397)
Q Consensus 156 ~~i~~l~~~~gi~livD~a~~~~~----~~~~~~~----~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~ 225 (397)
++|+++|++||+++|+|++|+... .+..+.. .+..+++.|++|.+|.+| +|+++.+++....+......
T Consensus 187 ~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~~~~l~~~~~~~~~~- 265 (383)
T TIGR03540 187 KELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVGNADLIAGLGKVKTN- 265 (383)
T ss_pred HHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCccceeeEEeCCHHHHHHHHHHHHh-
Confidence 788999999999999999997221 1122211 134577899999777666 89998877655554432211
Q ss_pred CccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEec-CCChH
Q psy8850 226 GHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN-FIEGE 304 (397)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 304 (397)
...+. +.....+...+++...+++++..+.++++++.+.+.|++ . ++.+..+.+ +..+++.++ +.+..
T Consensus 266 -----~~~~~-~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~-~-~~~~~~~~~---~~~~~~~l~~~~~~~ 334 (383)
T TIGR03540 266 -----VDSGV-FQAIQYAAIAALNGPQDVVKEIRKIYQRRRDLLLEALKK-I-GIDVEKPKA---TFYVWVPVPEGYTSA 334 (383)
T ss_pred -----cccCC-ChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHh-C-CCEecCCCc---ceEEEEECCCCCCHH
Confidence 11122 223333444555443445777888899999999999998 4 676664433 344566765 34667
Q ss_pred HHHHHh-C--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHH
Q psy8850 305 SLLMAI-K--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 368 (397)
Q Consensus 305 ~~~~~l-~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~ 368 (397)
++...+ . ||.+.+|..|.. ...+++||+++. +++++++.++.|.+
T Consensus 335 ~~~~~ll~~~gi~v~~g~~f~~-----------------~~~~~~Ris~~~--~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 335 EFAARLLEETGVVVTPGVGFGE-----------------YGEGYIRISLTV--PDERLEEAVARIKK 382 (383)
T ss_pred HHHHHHHHHCCEEEecchhhCc-----------------cCCCeEEEEecC--CHHHHHHHHHHHhh
Confidence 787775 2 899999976542 013789999974 67888888777753
No 65
>PRK09105 putative aminotransferase; Provisional
Probab=99.97 E-value=2.2e-29 Score=234.50 Aligned_cols=309 Identities=13% Similarity=0.105 Sum_probs=224.4
Q ss_pred CCCCCC-CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHh
Q psy8850 2 DYSATT-PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAH 80 (397)
Q Consensus 2 ~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~ 80 (397)
|.+.+. ++|+.+++++.+...... .|. + . ...++++.+++++|+++++|++|+|+++++.+++.++.
T Consensus 49 ~~~~~~~~~~~~~~~a~~~~~~~~~------~Y~--~--~-~~~~Lr~aia~~~~v~~e~I~it~Gs~~ai~~~~~~l~- 116 (370)
T PRK09105 49 NANECPLGPSPAARDAAARSAALSG------RYD--L--E-LEDDLRTLFAAQEGLPADHVMAYAGSSEPLNYAVLAFT- 116 (370)
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHhc------CCC--C--c-hHHHHHHHHHHHhCcChhhEEEcCChHHHHHHHHHHHc-
Confidence 444443 568899999988765311 121 1 1 26789999999999999999999999999999999887
Q ss_pred hhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHH
Q psy8850 81 FYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGE 160 (397)
Q Consensus 81 ~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~ 160 (397)
++||+|++++|+|+.+...+... |.+++.+|.++++.+|++++++. .++++++++++|+||||.+++.+++.+
T Consensus 117 ---~~gd~Vli~~P~y~~~~~~~~~~---g~~~~~v~~~~~~~~d~~~l~~~-~~~~~~v~l~nP~NPTG~~~~~~~l~~ 189 (370)
T PRK09105 117 ---SPTAGLVTADPTYEAGWRAADAQ---GAPVAKVPLRADGAHDVKAMLAA-DPNAGLIYICNPNNPTGTVTPRADIEW 189 (370)
T ss_pred ---CCCCEEEEeCCChHHHHHHHHHc---CCeEEEecCCCCCCCCHHHHHhc-CCCCCEEEEeCCCCCCCcCcCHHHHHH
Confidence 78999999999999998877766 99999999987788999999887 567899999999999999999888877
Q ss_pred HHHh--cCcEEEEecccccCc-cc--cccCcc-cccEEEeccccccCCCC--ceEEEEecCCCCccccccccCCcccccc
Q psy8850 161 LCRS--KGVIFHCDAAQAVGK-ID--INIQNY-KVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLR 232 (397)
Q Consensus 161 l~~~--~gi~livD~a~~~~~-~~--~~~~~~-~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (397)
+++. +|+++|+|++|.... .+ .++... ...+++.|++|.+|.+| +|+++++++..+.+... .
T Consensus 190 l~~~~~~~~~lIvDEaY~~f~~~~s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~~i~~l~~~--~-------- 259 (370)
T PRK09105 190 LLANKPAGSVLLVDEAYIHFSDAPSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAARPDLLAKLARF--G-------- 259 (370)
T ss_pred HHHhCCCCcEEEEECchHHhccCcchHHHHhhCCCEEEEecccHhhcCCccceeeeecCHHHHHHHHhc--C--------
Confidence 7653 489999999995221 11 122111 23467789999887667 89999887665555443 1
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCChHHHHHHhC-
Q psy8850 233 SGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAIK- 311 (397)
Q Consensus 233 ~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~- 311 (397)
....+.....+..++++. .+.++...+++.++++++.+.|++ + ++.+..+. .+++.+.++ .+..++.+.|.
T Consensus 260 ~~~~~~~~~~aa~~~L~~-~~~~~~~~~~~~~~r~~l~~~L~~-~-g~~~~~~~----~~f~~~~~~-~~~~~l~~~L~~ 331 (370)
T PRK09105 260 HNPLPVPAAAAGLASLRD-PKLVPQRRAENAAVREDTIAWLKK-K-GYKCTPSQ----ANCFMVDVK-RPAKAVADAMAK 331 (370)
T ss_pred CCCcCHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHHHH-C-CCCcCCCC----CcEEEEeCC-CCHHHHHHHHHH
Confidence 112333333334345543 345677788899999999999998 4 65554332 334445554 45667777775
Q ss_pred -CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHH
Q psy8850 312 -DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKV 370 (397)
Q Consensus 312 -~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~ 370 (397)
||.+ |..+.. ..+++||+++ +++++++++++|++++
T Consensus 332 ~gI~v--~~~~~~------------------~~~~~Ris~~---~~~~~~~l~~al~~~~ 368 (370)
T PRK09105 332 QGVFI--GRSWPI------------------WPNWVRVTVG---SEEEMAAFRSAFAKVM 368 (370)
T ss_pred CCcEE--ecCCCC------------------CCCeEEEEcC---CHHHHHHHHHHHHHHh
Confidence 7777 222210 1378999987 5889999999998765
No 66
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.97 E-value=1.3e-29 Score=239.29 Aligned_cols=318 Identities=14% Similarity=0.124 Sum_probs=228.5
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHh------CCCCCcEEEeCChhHHHHHHHHHhHhh
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLI------YADPREIIWTSGATESNNLAIKGAAHF 81 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~------~~~~~~i~~~~g~t~a~~~~l~~l~~~ 81 (397)
++++.+.+++.+.+.... . .|.. ......+++.+++++ ++++++|++|+|+++|+..++.++.
T Consensus 44 ~~~~~~~~~~~~~~~~~~----~-~Y~~----~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~-- 112 (393)
T PRK05764 44 DTPEHIKEAAIEALDDGK----T-KYTP----AAGIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYNAFMALL-- 112 (393)
T ss_pred CCCHHHHHHHHHHHhcCC----C-CcCC----CCChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHHHHHHHhc--
Confidence 346788888888775411 1 1211 223566777777766 3567789999999999999999887
Q ss_pred hccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCC--CCCCCHHHHHHHhcCCceEEEEecccCccccccc---HH
Q psy8850 82 YKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN--NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---IL 156 (397)
Q Consensus 82 ~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~---l~ 156 (397)
++|+.|++++++|..+...+... |.+++.++.+. ++.+|++++++++.++++++++++++||||.++| ++
T Consensus 113 --~~gd~vl~~~p~y~~~~~~~~~~---g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~NPtG~~~~~~~~~ 187 (393)
T PRK05764 113 --DPGDEVIIPAPYWVSYPEMVKLA---GGVPVFVPTGEENGFKLTVEQLEAAITPKTKALILNSPSNPTGAVYSPEELE 187 (393)
T ss_pred --CCCCEEEecCCCCcchHHHHHHc---CCEEEEEecCcccCCcCCHHHHHHhhCccceEEEEECCCCCCCcccCHHHHH
Confidence 78999999999999988777666 99999999873 4568999999999889999999999999999987 67
Q ss_pred HHHHHHHhcCcEEEEecccccCcc------cc-cc--CcccccEEEeccccccCCCC--ceEEEEecCCCCccccccccC
Q psy8850 157 EIGELCRSKGVIFHCDAAQAVGKI------DI-NI--QNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGG 225 (397)
Q Consensus 157 ~i~~l~~~~gi~livD~a~~~~~~------~~-~~--~~~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~ 225 (397)
+|+++|++||+++++|++|+.... +. .+ ...+.++++.|++|.+|.+| +|+++.+++..+.+......
T Consensus 188 ~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~i~~~~~~~~~~~~~~~~- 266 (393)
T PRK05764 188 AIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGWRLGYAAGPKELIKAMSKLQSH- 266 (393)
T ss_pred HHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccccCccceeEEEecCHHHHHHHHHHHhh-
Confidence 889999999999999999873221 11 11 12246789999999767556 78888876655554433211
Q ss_pred CccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCC----
Q psy8850 226 GHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFI---- 301 (397)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 301 (397)
.....+.....++..+++...+.+++..+++.++++.+.+.|++ ++++.+..+.+ +..+++.++..
T Consensus 267 ------~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~g---~~~~~~~~~~~~~~~ 336 (393)
T PRK05764 267 ------STSNPTSIAQYAAVAALNGPQDEVEEMRQAFEERRDLMVDGLNE-IPGLECPKPEG---AFYVFPNVSKLLGKS 336 (393)
T ss_pred ------cccCCChHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhh-CCCCcccCCCc---ceEEEEecccccccc
Confidence 11123333334444555422345677888888999999999998 76777665432 34455565532
Q ss_pred --ChHHHHHHh-C--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHH
Q psy8850 302 --EGESLLMAI-K--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 302 --~~~~~~~~l-~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 373 (397)
++.++...+ . ||.+.+|..|.. .+++||+++. +++++++++++|.+++++.
T Consensus 337 ~~~~~~~~~~l~~~~gi~v~~g~~f~~-------------------~~~vRis~~~--~~~~~~~~i~~l~~~~~~~ 392 (393)
T PRK05764 337 ITDSLEFAEALLEEAGVAVVPGIAFGA-------------------PGYVRLSYAT--SLEDLEEGLERIERFLESL 392 (393)
T ss_pred cCCHHHHHHHHHHhCCEEEccccccCC-------------------CCEEEEEecC--CHHHHHHHHHHHHHHHHhh
Confidence 135666555 2 899998865532 3899999985 7999999999999988754
No 67
>KOG0257|consensus
Probab=99.97 E-value=3.7e-30 Score=227.24 Aligned_cols=269 Identities=17% Similarity=0.166 Sum_probs=210.3
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCC---CCCcEEEeCChhHHHHHHHHHhHhhhcc
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYA---DPREIIWTSGATESNNLAIKGAAHFYKK 84 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~---~~~~i~~~~g~t~a~~~~l~~l~~~~~~ 84 (397)
++|+.|.+++++....-. .. +|..++..++....+++++++++|. +.++|++|.|+.+|+..++++++ +
T Consensus 44 ~~P~fv~ea~~~~~~~~~---~~-qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~----~ 115 (420)
T KOG0257|consen 44 PPPKFVTEAAKNAAKEPS---TN-QYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGLL----N 115 (420)
T ss_pred CCcHHHHHHHHHHhccch---hc-cccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHHHc----C
Confidence 678899999998876521 22 6777888889999999999998884 55679999999999999999999 8
Q ss_pred CCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccC--------CCCCCCHHHHHHHhcCCceEEEEecccCccccccc--
Q psy8850 85 RGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPK--------NNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP-- 154 (397)
Q Consensus 85 ~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~--------~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~-- 154 (397)
+||+|++.+|.|+++.....++ |.+++.++.. +++.+|.+++|.+++++|++|++++||||||.+.+
T Consensus 116 ~GDeVii~eP~fd~Y~~~~~ma---G~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~kTk~Ii~ntPhNPtGkvfsRe 192 (420)
T KOG0257|consen 116 PGDEVIVFEPFFDCYIPQVVMA---GGTPVFVPLKPKEGNVSSSDWTLDPEELESKITEKTKAIILNTPHNPTGKVFSRE 192 (420)
T ss_pred CCCEEEEecCcchhhhhHHhhc---CCcceeeccccccccccCccccCChHHHHhhccCCccEEEEeCCCCCcCcccCHH
Confidence 9999999999999999999999 8888888876 35789999999999999999999999999999998
Q ss_pred -HHHHHHHHHhcCcEEEEecccccCccc----c----ccCcccccEEEeccccccCCCC--ceEEEEecCCCCccccccc
Q psy8850 155 -ILEIGELCRSKGVIFHCDAAQAVGKID----I----NIQNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIH 223 (397)
Q Consensus 155 -l~~i~~l~~~~gi~livD~a~~~~~~~----~----~~~~~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~ 223 (397)
+++|+++|++||+++|.|++|...... . ....+...+-++|++|.+|..| +|++++++.+.....+...
T Consensus 193 eLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGWrlGW~igp~~L~~~~~~vh~ 272 (420)
T KOG0257|consen 193 ELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGWRLGWAIGPKHLYSALFPVHQ 272 (420)
T ss_pred HHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEeccccceeeeeeeeeeeeechHHhhhhHHHHhh
Confidence 788999999999999999998732211 1 1223357788999999888777 8999997666665554432
Q ss_pred cCCccccccCCCCchhHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEE
Q psy8850 224 GGGHEYGLRSGTLATHQIVGMGEAFRLAR--------IEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLN 295 (397)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~l~~al~~~~--------~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 295 (397)
. +....+ ++...+..+++..-. ..+..+.+.++++++.|.+.|.+ + |+.+..+++ .+.++
T Consensus 273 ~------~~~~~~-Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~-l-g~~v~~p~g---ayyl~ 340 (420)
T KOG0257|consen 273 N------FVFTCP-TPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEE-L-GLKVTGPEG---AYYLW 340 (420)
T ss_pred c------cccccC-cHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHh-c-CCccccCCC---ceEEE
Confidence 2 112222 222222223333222 12455889999999999999999 5 888888766 56667
Q ss_pred EEec
Q psy8850 296 ISFN 299 (397)
Q Consensus 296 ~~~~ 299 (397)
..|.
T Consensus 341 adfs 344 (420)
T KOG0257|consen 341 ADFS 344 (420)
T ss_pred Eecc
Confidence 7766
No 68
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.97 E-value=7.9e-30 Score=240.00 Aligned_cols=316 Identities=13% Similarity=0.111 Sum_probs=221.9
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHh----C--CCCC-cEEEeCChhHHHHHHHHHhHh
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLI----Y--ADPR-EIIWTSGATESNNLAIKGAAH 80 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~--~~~~-~i~~~~g~t~a~~~~l~~l~~ 80 (397)
++++.+.+++.+.+.... . .+|.......++|+++++++ | ++++ +|++|+|+++|+.+++.+++
T Consensus 43 ~~~~~~~~~~~~~~~~~~------~--~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~al~~~~~~l~- 113 (388)
T PRK07366 43 PAPAHALEAIAQSLHDPS------T--HGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQEGTAHLPLAVL- 113 (388)
T ss_pred CCCHHHHHHHHHHHhCcc------c--CCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHHHHHHHHHHhC-
Confidence 457888888887764310 1 11111234456777777766 4 5677 69999999999999999888
Q ss_pred hhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCC--CCCCHHHHHHHhcCCceEEEEecccCcccccccH---
Q psy8850 81 FYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNN--GLITLSQLEEKICSDTILVSVMLVNNEIGVIQPI--- 155 (397)
Q Consensus 81 ~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~--~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l--- 155 (397)
++||+|++.+|+|+.+...+... |.+++.+|.+.+ ..+|++++++.+.++++++++++||||||.+++.
T Consensus 114 ---~~gd~Vlv~~P~y~~~~~~~~~~---g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~p~NPTG~~~s~~~~ 187 (388)
T PRK07366 114 ---NPGDFALLLDPGYPSHAGGVYLA---GGQIYPMPLRAENDFLPVFADIPTEVLAQARLMVLSYPHNPTTAIAPLSFF 187 (388)
T ss_pred ---CCCCEEEEcCCCCcchHHHHHhc---CCEEEEEECCCccCCCCCHHHHHHhhcccceEEEEeCCCCCCCccCCHHHH
Confidence 79999999999999998888877 999999999743 4578889988888889999999999999999995
Q ss_pred HHHHHHHHhcCcEEEEecccccCcc-----ccccCcc----cccEEEeccccccCCCC--ceEEEEecCCCCcccccccc
Q psy8850 156 LEIGELCRSKGVIFHCDAAQAVGKI-----DINIQNY----KVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHG 224 (397)
Q Consensus 156 ~~i~~l~~~~gi~livD~a~~~~~~-----~~~~~~~----~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~ 224 (397)
++|+++|++||++||+|++|.-... ...+... ...+++.|++|.+|.+| +|+++.++++.+.+......
T Consensus 188 ~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~li~~l~~~~~~ 267 (388)
T PRK07366 188 QEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAIGNAQLIQALRQVKAV 267 (388)
T ss_pred HHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcchhheehcCCHHHHHHHHHHHhh
Confidence 5678899999999999999872211 1112111 23477899999766445 79998877665555433211
Q ss_pred CCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCC---
Q psy8850 225 GGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFI--- 301 (397)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 301 (397)
...++.+.....++ +++....+.+++.++.++++++++.+.|++ + ++.+..+.+ +.++++.++..
T Consensus 268 ------~~~~~~~~~~~~a~-~~l~~~~~~l~~~~~~~~~~r~~l~~~L~~-~-~~~~~~p~~---g~f~~~~~~~~~~~ 335 (388)
T PRK07366 268 ------VDFNQYRGILNGAI-AALTGPQATVQQTVQIFRQRRDAFINALHQ-I-GWPVPLPEA---TMYVWAKLPEPWQG 335 (388)
T ss_pred ------cccCCCHHHHHHHH-HHHhCcHHHHHHHHHHHHHHHHHHHHHHHH-C-CCcccCCCe---eEEEEEECCcccCC
Confidence 11112222222222 344322346788889999999999999988 4 554433322 55667777642
Q ss_pred ChHHHHHHh-C--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHH
Q psy8850 302 EGESLLMAI-K--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (397)
Q Consensus 302 ~~~~~~~~l-~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 369 (397)
+..++...+ . ||.+.+|..|.. ...++|||+++. +.+++++.+++|.++
T Consensus 336 ~~~~~~~~l~~~~gv~v~pg~~f~~-----------------~~~~~iRi~~~~--~~~~l~~~l~rl~~~ 387 (388)
T PRK07366 336 NSVEFCTQLVAQTGVAASPGSGFGK-----------------SGEGYVRFALVH--DPDILEEAVERIAAF 387 (388)
T ss_pred CHHHHHHHHHHhCCEEEeCchHhCc-----------------CCCCeEEEEecC--CHHHHHHHHHHHHHh
Confidence 356676655 3 899999865532 113789999984 689999999999865
No 69
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.97 E-value=1.7e-29 Score=238.63 Aligned_cols=322 Identities=14% Similarity=0.088 Sum_probs=227.0
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhC-----CCCCcEEEeCChhHHHHHHHHHhHhh
Q psy8850 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIY-----ADPREIIWTSGATESNNLAIKGAAHF 81 (397)
Q Consensus 7 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~-----~~~~~i~~~~g~t~a~~~~l~~l~~~ 81 (397)
.++++.+.+++.+.+.... ..+|.......+++++++++++ +++++|++|+|+++|+.+++.++.
T Consensus 47 ~~~~~~~~~~~~~~~~~~~--------~~~Y~~~~g~~~lr~aia~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~-- 116 (401)
T TIGR01264 47 LPTDPEVMQAMKDSLDSGK--------YNGYAPTVGALSAREAIASYYHNPDGPIEADDVVLCSGCSHAIEMCIAALA-- 116 (401)
T ss_pred CCCCHHHHHHHHHHHhccC--------CCCCCCCCCCHHHHHHHHHHHhhcCCCCCHHHEEECcChHHHHHHHHHHhC--
Confidence 3567889999888775411 1112222345778888888887 677889999999999999999887
Q ss_pred hccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCC--CCCCCHHHHHHHhcCCceEEEEecccCccccccc---HH
Q psy8850 82 YKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN--NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---IL 156 (397)
Q Consensus 82 ~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~---l~ 156 (397)
++|++|++++|+|+.+...+... |.+++.++++. ++.+|++.+++.+.++++++++++++||||.+++ ++
T Consensus 117 --~~gd~v~i~~P~y~~~~~~~~~~---g~~v~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~~~~~~~ 191 (401)
T TIGR01264 117 --NAGQNILVPRPGFPLYETLAESM---GIEVKLYNLLPDKSWEIDLKQLESLIDEKTAALIVNNPSNPCGSVFSRQHLE 191 (401)
T ss_pred --CCCCEEEEeCCCChhHHHHHHHc---CCEEEEeecCCccCCCCCHHHHHHHhccCceEEEEcCCCCCCCCCCCHHHHH
Confidence 78999999999999887776666 99999988753 4679999999999888999999999999999987 67
Q ss_pred HHHHHHHhcCcEEEEecccccCcc----ccccCcc---cccEEEeccccccCCCC--ceEEEEecCC--CCccccccccC
Q psy8850 157 EIGELCRSKGVIFHCDAAQAVGKI----DINIQNY---KVDLMSFSAHKIYGPKG--IGALYIRRNP--RTRIEAQIHGG 225 (397)
Q Consensus 157 ~i~~l~~~~gi~livD~a~~~~~~----~~~~~~~---~~d~~~~s~~K~~g~~g--~g~~~~~~~~--~~~~~~~~~~~ 225 (397)
+|+++|+++|++||+|++|..... ...+..+ ...+++.|++|.++.+| +|++++++.. ...+...+...
T Consensus 192 ~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~iv~~~~~~~~~~~~~~~~~~ 271 (401)
T TIGR01264 192 EILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKRWLVPGWRLGWIIIHDRRGILRDIRDGLVKL 271 (401)
T ss_pred HHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEEccCcccCCCccceEEEEEecCcchhHHHHHHHHHHH
Confidence 789999999999999999873211 1111111 12478899999666556 7888876421 11111100000
Q ss_pred CccccccCCCCchhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecC----
Q psy8850 226 GHEYGLRSGTLATHQIVGMGEAFRL-ARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF---- 300 (397)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~l~~al~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 300 (397)
. ......+.....++..+++. ..+.+++..+++.++++++.+.|++ ++++.+..+.+ +.++++.++.
T Consensus 272 ---~-~~~~~~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~-~~~~~~~~p~~---g~f~~~~~~~~~~~ 343 (401)
T TIGR01264 272 ---S-QRILGPCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAA-VPGLRPVMPSG---AMYMMVGIEMEHFP 343 (401)
T ss_pred ---h-hccCCCCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHh-CCCCcccCCCe---eeEEEEEecccccC
Confidence 0 00112333444444455542 2345778888999999999999998 76655443333 4566666542
Q ss_pred --CChHHHHHHh--C-CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHH
Q psy8850 301 --IEGESLLMAI--K-DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKK 372 (397)
Q Consensus 301 --~~~~~~~~~l--~-~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 372 (397)
.+..++.+.+ + ||.+.+|..|.. .+++||+++. +++++++.+++|.+++++
T Consensus 344 ~~~~~~~~~~~l~~~~gI~v~pg~~f~~-------------------~~~iRis~~~--~~~~l~~~l~rl~~~~~~ 399 (401)
T TIGR01264 344 EFKNDVEFTERLVAEQSVFCLPGSCFEY-------------------PGFFRVVLTV--PVVMMEEACSRIQEFCER 399 (401)
T ss_pred CCCCHHHHHHHHHHhCCEEEeCchhcCC-------------------CCeEEEEEcC--CHHHHHHHHHHHHHHHhc
Confidence 2356666665 2 899999865432 2789999985 689999999999988764
No 70
>PLN02656 tyrosine transaminase
Probab=99.97 E-value=1.7e-29 Score=238.80 Aligned_cols=321 Identities=14% Similarity=0.132 Sum_probs=225.2
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhC------CCCCcEEEeCChhHHHHHHHHHhHh
Q psy8850 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIY------ADPREIIWTSGATESNNLAIKGAAH 80 (397)
Q Consensus 7 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~------~~~~~i~~~~g~t~a~~~~l~~l~~ 80 (397)
.++|+.+++++.+.+.... ..+|.......+++++++++++ +++++|++|+|+++|+.+++.++.
T Consensus 47 ~~~~~~~~~~~~~~~~~~~--------~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~- 117 (409)
T PLN02656 47 FHTTHVAQEAVVDALQSNK--------FNGYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQAIDVALSMLA- 117 (409)
T ss_pred CCCCHHHHHHHHHHHhcCC--------CCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcccEEEeCChHHHHHHHHHHHh-
Confidence 4678999999988876411 0111122345667777777763 567789999999999999999887
Q ss_pred hhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCC--CCCCCHHHHHHHhcCCceEEEEecccCccccccc---H
Q psy8850 81 FYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN--NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---I 155 (397)
Q Consensus 81 ~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~---l 155 (397)
++||+|++++|+|+.+....... |.+++.+|++. ++.+|+++++++++++++++++++|+||||.+++ +
T Consensus 118 ---~~gd~Vlv~~p~y~~~~~~~~~~---g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPtG~~~s~~~~ 191 (409)
T PLN02656 118 ---RPGANILLPRPGFPIYELCAAFR---HLEVRYVDLLPEKGWEVDLDAVEALADQNTVALVIINPGNPCGNVYSYQHL 191 (409)
T ss_pred ---CCCCeEEEeCCCCCcHHHHHHHc---CCEEEEEeCCCcCCCCCCHHHHHHHhccCceEEEEECCCCCCCCCCCHHHH
Confidence 79999999999999887666665 99999999853 4578999999999989999999999999999986 6
Q ss_pred HHHHHHHHhcCcEEEEecccccCcc----ccc---cCcccccEEEeccccccCCCC--ceEEEEec--------CCCCcc
Q psy8850 156 LEIGELCRSKGVIFHCDAAQAVGKI----DIN---IQNYKVDLMSFSAHKIYGPKG--IGALYIRR--------NPRTRI 218 (397)
Q Consensus 156 ~~i~~l~~~~gi~livD~a~~~~~~----~~~---~~~~~~d~~~~s~~K~~g~~g--~g~~~~~~--------~~~~~~ 218 (397)
++|+++|++||++||+|++|+.... ... +......+++.|++|.++.+| +|++++++ +....+
T Consensus 192 ~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRiG~~i~~~~~~~~~~~~~~~~~ 271 (409)
T PLN02656 192 KKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGWRLGWFVTTDPSGSFRDPKIVERI 271 (409)
T ss_pred HHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhccCcceeEEEEEEeCcccccccHHHHHHH
Confidence 7889999999999999999973211 111 111234688899999655545 78888852 222222
Q ss_pred ccccccCCccccccCCCCchhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEE
Q psy8850 219 EAQIHGGGHEYGLRSGTLATHQIVGMGEAFRL-ARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNIS 297 (397)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 297 (397)
..... . .+.++.....++..+++. ....+++..+.++++++.+.+.|++ +++......+.. +..+++.
T Consensus 272 ~~~~~-------~-~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~-~~~~~~~~~p~g--g~~~w~~ 340 (409)
T PLN02656 272 KKYFD-------I-LGGPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKE-IPCITCPHKPEG--SMAVMVK 340 (409)
T ss_pred HHHHh-------h-hcCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhh-CCCCcCCcCCCe--EEEEEEe
Confidence 22110 0 112344445555556653 2335777888999999999999988 655432222221 3445556
Q ss_pred ecC-----C-ChHHHH-HHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHH
Q psy8850 298 FNF-----I-EGESLL-MAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 368 (397)
Q Consensus 298 ~~~-----~-~~~~~~-~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~ 368 (397)
++. . +..++. ..+. ||.+.+|..|.. .++|||+++. +++++++.+++|++
T Consensus 341 l~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg~-------------------~~~iRi~~~~--~~e~l~eal~rl~~ 399 (409)
T PLN02656 341 LNLSLLEDISDDIDFCFKLAREESVIILPGTAVGL-------------------KNWLRITFAA--DPSSLEEALGRIKS 399 (409)
T ss_pred cchhhcCCCCCHHHHHHHHHHhCCEEEecchhcCC-------------------CCeEEEEeCC--CHHHHHHHHHHHHH
Confidence 541 1 233443 3333 899999965532 2789999995 79999999999999
Q ss_pred HHHHHH
Q psy8850 369 KVKKLR 374 (397)
Q Consensus 369 ~~~~~~ 374 (397)
++.++.
T Consensus 400 ~~~~~~ 405 (409)
T PLN02656 400 FYLRHS 405 (409)
T ss_pred HHHHhc
Confidence 887655
No 71
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.97 E-value=3.3e-29 Score=234.35 Aligned_cols=305 Identities=13% Similarity=0.069 Sum_probs=222.9
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCC
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGK 87 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~ 87 (397)
++|+.+++++.+.. ... .|.. ....++++++++++++++++|++|+|+++++.+++.++. ++||
T Consensus 65 ~~~~~v~~a~~~~~-~~~------~Yp~-----~~~~~lr~~ia~~~~~~~~~I~~t~Ga~~~i~~~~~~~~----~~gd 128 (380)
T PLN03026 65 GPPPEVLEALGNMK-FPY------VYPD-----PESRRLRAALAEDSGLESENILVGCGADELIDLLMRCVL----DPGD 128 (380)
T ss_pred CCCHHHHHHHHhhH-hhc------cCCC-----CCHHHHHHHHHHHhCcChhhEEEcCCHHHHHHHHHHHhc----CCCC
Confidence 56778888876521 101 1111 124679999999999999999999999999999998887 7999
Q ss_pred EEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHh-cCCceEEEEecccCcccccccHHHHHHHHHhcC
Q psy8850 88 HIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKI-CSDTILVSVMLVNNEIGVIQPILEIGELCRSKG 166 (397)
Q Consensus 88 ~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i-~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~g 166 (397)
+|++++|.|+.+....... |.++..+|.+.++.+|++++++++ ++++++|++++|+||||.++|.+++.++++..
T Consensus 129 ~Vlv~~P~y~~y~~~~~~~---g~~~~~v~~~~~~~~d~~~l~~~~~~~~~~~v~l~~P~NPTG~~~~~~~l~~l~~~~- 204 (380)
T PLN03026 129 KIIDCPPTFGMYVFDAAVN---GAEVIKVPRTPDFSLDVPRIVEAVETHKPKLLFLTSPNNPDGSIISDDDLLKILELP- 204 (380)
T ss_pred EEEEcCCChHHHHHHHHHc---CCEEEEeecCCCCCcCHHHHHHHHhccCCcEEEEeCCCCCCCCCCCHHHHHHHHhcC-
Confidence 9999999998776665555 999999998777789999999998 77899999999999999999999999999865
Q ss_pred cEEEEecccccCc----cccccCcccccEEEeccccccCCCC--ceEEEEecCCCCccccccccCCccccccCCCCchhH
Q psy8850 167 VIFHCDAAQAVGK----IDINIQNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQ 240 (397)
Q Consensus 167 i~livD~a~~~~~----~~~~~~~~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (397)
++||+|++|.-.. ........+..+++.|++|.+|..| +|+++++++....+...... ...+...
T Consensus 205 ~~vi~DeaY~~~~~~~~~~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~~~~i~~l~~~~~~---------~~~~~~~ 275 (380)
T PLN03026 205 ILVVLDEAYIEFSTQESRMKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP---------YNVSVAA 275 (380)
T ss_pred CEEEEECcchhhcCCcchHHHHHhCCCEEEEecchHhhcCccccceeeecCHHHHHHHHHhcCC---------CCCCHHH
Confidence 9999999986221 1111122356788999999777556 78888876655544332211 1233344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEec-CCChHHHHHHhC--CcEecc
Q psy8850 241 IVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN-FIEGESLLMAIK--DIAVSS 317 (397)
Q Consensus 241 ~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~--~i~~~~ 317 (397)
..+..++++. .+.+++..+.+.+.++++.+.|++ ++++.+. +.. +.++++.++ +.+..++...|. ||.+.+
T Consensus 276 q~aa~~aL~~-~~~~~~~~~~~~~~r~~l~~~L~~-~~~~~~~-p~~---~~f~~~~~~~~~~~~~~~~~l~~~gI~v~~ 349 (380)
T PLN03026 276 EVAACAALSN-PKYLEDVKNALVEERERLFGLLKE-VPFLEPY-PSD---ANFILCRVTSGRDAKKLKEDLAKMGVMVRH 349 (380)
T ss_pred HHHHHHHhhC-HHHHHHHHHHHHHHHHHHHHHHHH-CCCCeEC-CCC---CeEEEEECCCCCCHHHHHHHHHHCCeEEEE
Confidence 4444455643 235677788899999999999998 6555442 222 456667765 346677777775 888876
Q ss_pred cCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHH
Q psy8850 318 GSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (397)
Q Consensus 318 g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 369 (397)
+... ...+++||+++ +.+++++++++|+++
T Consensus 350 ~~~~-------------------~~~~~lRis~~---~~~~~~~l~~al~~~ 379 (380)
T PLN03026 350 YNSK-------------------ELKGYIRVSVG---KPEHTDALMEALKQL 379 (380)
T ss_pred CCCC-------------------CCCCEEEEecC---CHHHHHHHHHHHHHh
Confidence 5321 11378999998 578999999999754
No 72
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.97 E-value=1.1e-29 Score=246.35 Aligned_cols=322 Identities=14% Similarity=0.117 Sum_probs=223.4
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHh------CCCCCcEEEeCChhHHHHHHHHHhHhh
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLI------YADPREIIWTSGATESNNLAIKGAAHF 81 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~------~~~~~~i~~~~g~t~a~~~~l~~l~~~ 81 (397)
++|+.+++++.+.+.... . |.......++|+++++++ ++++++|++|+|+++++.+++.++.
T Consensus 162 ~~p~~~~~~~~~~~~~~~------~----Y~~~~G~~~lReaia~~~~~~~~~~~~~~~I~it~G~~eal~~~~~~l~-- 229 (517)
T PRK13355 162 RTPDEVVYDMAQQLTDTE------G----YSDSKGLFSARKAIMQYAQLKGLPNVDVDDIYTGNGVSELINLSMSALL-- 229 (517)
T ss_pred CCCHHHHHHHHHHhhcCC------C----CCCCcChHHHHHHHHHHHHhcCCCCCChhHEEEeCcHHHHHHHHHHHhC--
Confidence 458889999888765321 1 222345678888888888 6788899999999999999999887
Q ss_pred hccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCC--CCCCCHHHHHHHhcCCceEEEEecccCccccccc---HH
Q psy8850 82 YKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN--NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---IL 156 (397)
Q Consensus 82 ~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~---l~ 156 (397)
++||+|+++.|+|+.+...+... |.+++.++++. ++.+|+++++++++++++++++++|+||||.+++ ++
T Consensus 230 --~~Gd~Vli~~P~y~~y~~~~~~~---g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~k~i~i~nP~NPTG~v~~~~~l~ 304 (517)
T PRK13355 230 --DDGDEVLIPSPDYPLWTACVNLA---GGTAVHYRCDEQSEWYPDIDDIRSKITSRTKAIVIINPNNPTGALYPREVLQ 304 (517)
T ss_pred --CCCCEEEEcCCCCcCHHHHHHHC---CCEEEEeecCcccCCCCCHHHHHHhcCcCceEEEEECCCCCCCcCcCHHHHH
Confidence 89999999999999998887777 99999998864 4679999999999999999999999999999999 67
Q ss_pred HHHHHHHhcCcEEEEecccccCc----cccccCcccc---cEEEeccccccCCCC--ceEEEEec--CCCCccccccccC
Q psy8850 157 EIGELCRSKGVIFHCDAAQAVGK----IDINIQNYKV---DLMSFSAHKIYGPKG--IGALYIRR--NPRTRIEAQIHGG 225 (397)
Q Consensus 157 ~i~~l~~~~gi~livD~a~~~~~----~~~~~~~~~~---d~~~~s~~K~~g~~g--~g~~~~~~--~~~~~~~~~~~~~ 225 (397)
+|+++|++||++||+|++|.-.. ....+..+.. .+++.|++|.++.+| +|+++++. +....+...+.-
T Consensus 305 ~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~i~~~~~~~~~~~~~~l~~- 383 (517)
T PRK13355 305 QIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGLSKSHMIAGYRIGWMILSGNKRIAKDYIEGLNM- 383 (517)
T ss_pred HHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCCCCeEEEEecchhhccCcccceEEEEeeCchhhHHHHHHHHHH-
Confidence 88999999999999999987211 1112111112 344589999665555 78888652 221111110000
Q ss_pred CccccccCCCCchhHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecC--
Q psy8850 226 GHEYGLRSGTLATHQIVGMGEAFRL---ARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF-- 300 (397)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~l~~al~~---~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 300 (397)
...... ..+.....+...+++. ..+.+... +++.+.++++.+.|++ ++++.+..+.+ ...+++.++.
T Consensus 384 --~~~~~~-~~~~~~q~a~~~aL~~~~~~~~~~~~~-~~~~~~r~~l~~~L~~-~~g~~~~~p~g---~fy~~~~l~~~~ 455 (517)
T PRK13355 384 --LANMRL-CSNVPAQSIVQTALGGHQSVKDYLVPG-GRVYEQRELVYNALNA-IPGISAVKPKA---AFYIFPKIDVKK 455 (517)
T ss_pred --HhcCcC-CcChHHHHHHHHHhcCCccHHHHHHHH-HHHHHHHHHHHHHHhc-CCCcccCCCCe---eeEEEeecCccc
Confidence 000111 2344444445456642 12233332 3445567899999988 77877665533 3334445542
Q ss_pred ---CChHHHHHH-hC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHHH
Q psy8850 301 ---IEGESLLMA-IK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKLR 374 (397)
Q Consensus 301 ---~~~~~~~~~-l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 374 (397)
.+..++... |. ||.+.+|..|.. ..+++|||++. .+++++++.+++|.++++.++
T Consensus 456 ~~~~~~~~~~~~ll~~~gV~v~pg~~F~~-----------------~~~~~~Ris~~--~~~~~l~~a~~rl~~~~~~~~ 516 (517)
T PRK13355 456 FNIHDDEQFALDLLHDKKVLIVQGTGFNW-----------------DKPDHFRVVYL--PRLEDLEDAMDRLADFFSYYR 516 (517)
T ss_pred CCCCCHHHHHHHHHHhCCEEEeCcchhCC-----------------CCcCEEEEEeC--CCHHHHHHHHHHHHHHHHHhh
Confidence 134444443 33 899999976642 12378999996 589999999999999988664
No 73
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.97 E-value=3.5e-29 Score=236.85 Aligned_cols=303 Identities=16% Similarity=0.140 Sum_probs=211.3
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHHhh-CCcEEEEe
Q psy8850 38 TAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLEN-DGFRVTYL 116 (397)
Q Consensus 38 ~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~-~g~~v~~v 116 (397)
...+...++++.+++++|++.+++.++++++.+.+.++.++... .++||+|+++++.|+++...+..++. .|.+++.+
T Consensus 61 g~~~~~~~~~~~la~~~g~~~~~v~~~~~g~~~~~~~~~~~~~~-~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v 139 (398)
T cd00613 61 GRLQALFELQTMLCELTGMDVANASLQDEATAAAEAAGLAAIRA-YHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEV 139 (398)
T ss_pred hHHHHHHHHHHHHHHHHCCCccceeccCchHHHHHHHHHHHHhc-ccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEe
Confidence 44578888999999999998767877786665555444433321 02389999999999999999888743 25899999
Q ss_pred ccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccH-HHHHHHHHhcCcEEEEecccccCccccccCcccccEEEec
Q psy8850 117 KPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPI-LEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFS 195 (397)
Q Consensus 117 ~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l-~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~~s 195 (397)
+.++++.+|++++++++++++++|++++++ ++|.+.|+ ++|.++|++||+++|+|++|+.+....+...+++|++++|
T Consensus 140 ~~~~~~~~d~~~l~~~i~~~t~~viv~~~~-~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~~~~~~~~~~~d~~~~s 218 (398)
T cd00613 140 PSDEGGTVDLEALKEEVSEEVAALMVQYPN-TLGVFEDLIKEIADIAHSAGALVYVDGDNLNLTGLKPPGEYGADIVVGN 218 (398)
T ss_pred ccCCCCCcCHHHHHHhcCCCeEEEEEECCC-CCceecchHHHHHHHHHhcCCEEEEEeccccccCCCChHHcCCCEEEee
Confidence 988777899999999999999999999985 89999885 9999999999999999999876655555555689999999
Q ss_pred cccccCC-----CCceEEEEecCCCCccccccccCCc-----------------cccccCCCCch-----hHHHHHHHHH
Q psy8850 196 AHKIYGP-----KGIGALYIRRNPRTRIEAQIHGGGH-----------------EYGLRSGTLAT-----HQIVGMGEAF 248 (397)
Q Consensus 196 ~~K~~g~-----~g~g~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~-----~~~~~l~~al 248 (397)
+||+++| +++|+++++++....+.+...++.. ..++..++.++ .......+++
T Consensus 219 ~~K~~~p~g~Ggp~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l 298 (398)
T cd00613 219 LQKTGVPHGGGGPGAGFFAVKKELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYI 298 (398)
T ss_pred ccccCCCCCCCCCceeEEEEhhhhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHH
Confidence 9995443 4578999987765554332222110 00111223222 2222222334
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecC---CChHHHHHHhC--CcEecccCccC
Q psy8850 249 RLA-RIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF---IEGESLLMAIK--DIAVSSGSACT 322 (397)
Q Consensus 249 ~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~--~i~~~~g~~~~ 322 (397)
+.+ .++++++.+++.++++++++.|++ +++.. ...+ .....+.+.++. .+..++...|. ++.+....
T Consensus 299 ~~~~~~g~~~~~~~~~~~~~~l~~~L~~-~~~~~--~~~~-~~~~~v~~~~~~~~~~~~~~~~~~L~~~gi~~~~~~--- 371 (398)
T cd00613 299 VYLGPEGLKEIAERAHLNANYLAKRLKE-VGGVL--PFNG-PFFHEFVLRLPPLYGIRAEDLAKALIDGGFHAPTMY--- 371 (398)
T ss_pred HHhCHHHHHHHHHHHHHHHHHHHHHHHh-cCCcc--cCCC-CeeEEEEEEcCCcchHHHHHHHHhhhhcCccccccc---
Confidence 433 447888999999999999999998 65533 1111 112334555553 23556776665 44332100
Q ss_pred CCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHH
Q psy8850 323 SASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLL 366 (397)
Q Consensus 323 ~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l 366 (397)
....+.||++++.++|++|||+++++|
T Consensus 372 -----------------~~~~~~lRis~~~~~t~edid~~~~~L 398 (398)
T cd00613 372 -----------------LPVDGTLMIEPTETETKEELDALLEAL 398 (398)
T ss_pred -----------------cCCCCeEEEEcCCCCCHHHHHHHHHhC
Confidence 012378999999999999999999864
No 74
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.97 E-value=3.2e-29 Score=232.28 Aligned_cols=316 Identities=14% Similarity=0.166 Sum_probs=225.5
Q ss_pred CCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccC
Q psy8850 6 TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKR 85 (397)
Q Consensus 6 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~ 85 (397)
.+++|+++++++.++...+ + ...+...++++.+++++|.+ ++++++|+|+|+.+++.++. ++
T Consensus 22 ~s~~~~~v~~a~~~~~~~~--------~----~~~~~~~~~~~~~a~~~g~~--~~~~~~g~t~al~~al~al~----~~ 83 (363)
T TIGR01437 22 VSTVSDEVADAQKRGAQNY--------F----EIKELVNKTGEYIANLLGVE--DAVIVSSASAGIAQSVAAVI----TR 83 (363)
T ss_pred CCCCCHHHHHHHHHHHhcC--------C----CHHHHHHHHHHHHHHhhCCC--eEEEEcCHHHHHHHHHHHHh----cC
Confidence 4568999999999987541 1 23567889999999999986 68999999999999999987 67
Q ss_pred CC---------------EEEEcCCCChhhHHHHHH-HhhCCcEEEEeccCCCCCCCHHHHHHHhcCCceEEE-EecccCc
Q psy8850 86 GK---------------HIITVQTEHKSVLDSIRK-LENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVS-VMLVNNE 148 (397)
Q Consensus 86 g~---------------~vl~~~~~~~s~~~~~~~-~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~-~~~~~~~ 148 (397)
|| +|+++.+.|..+...+.. +...|.++++++.+ +.+|+++++++++++|++++ +++++|+
T Consensus 84 Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~~--~~~d~~~le~ai~~~t~ai~~v~~~~~~ 161 (363)
T TIGR01437 84 GNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGYA--NECSAEQLEAAITEKTAAILYIKSHHCV 161 (363)
T ss_pred CCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcCC--CCCCHHHHHHhcChhceEEEEEecCCCC
Confidence 76 899988666555312211 12238899988874 56899999999999999765 5677899
Q ss_pred ccccccHHHHHHHHHhcCcEEEEecccccCccccccCcccccEEEecccc-ccCCCCceEEEEecCCCCccccccccCCc
Q psy8850 149 IGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEAQIHGGGH 227 (397)
Q Consensus 149 tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~~s~~K-~~g~~g~g~~~~~~~~~~~~~~~~~~~~~ 227 (397)
+|.+.|+++|+++||+||+++|+|++|+.... ....++.|++++|+|| +.||. .|+++.+++....+.....+.
T Consensus 162 ~g~~~~~~~i~~~a~~~gi~vivD~a~~~~~~--~~~~~g~D~~~~S~~K~l~gp~-~G~l~~~~~~i~~~~~~~~~~-- 236 (363)
T TIGR01437 162 QKSMLSVEDAAQVAQEHNLPLIVDAAAEEDLQ--KYYRLGADLVIYSGAKAIEGPT-SGLVLGKKKYIEWVKLQSKGI-- 236 (363)
T ss_pred cCCcCCHHHHHHHHHHcCCeEEEECCCCCchH--HHHHcCCCEEEEeCCcccCCCc-eEEEEEcHHHHHHHHhccCCC--
Confidence 99999999999999999999999999983221 1123468999999999 77887 699888765555443322221
Q ss_pred cccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCC--CCCceEEEEec----CC
Q psy8850 228 EYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNN--RIPHNLNISFN----FI 301 (397)
Q Consensus 228 ~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~----~~ 301 (397)
...++.++ ..++++.++++.+.+...+..+...++++++.+.|.+ ++++.+..+... .......+.|. +.
T Consensus 237 ~~~~~~~~---~~~~gl~aAl~~~~~~~~~~~~~~~~~~~~l~~~L~~-i~g~~~~~~~~~~~~~~~~~~v~~~~~~~g~ 312 (363)
T TIGR01437 237 GRAMKVGK---ENILGLTAALEQYLSTGKESGAEMVAKLTPFIEALNT-LKGVSASIVQDEAGRDIARAEIRFDESELGM 312 (363)
T ss_pred cceeccCH---HHHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHhc-CCCeEEEEecCCCCCcCceEEEEEeccCCCC
Confidence 12233333 3477888888887653334444555567789999999 899887743221 11112223343 46
Q ss_pred ChHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHH
Q psy8850 302 EGESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKV 370 (397)
Q Consensus 302 ~~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~ 370 (397)
+..++.+.|+ ++.+....++.+ .+.+|+++.. ++++|+|.++++|++++
T Consensus 313 ~~~~l~~~L~~~~~~I~~r~~~~~-------------------~~~~~l~~~~-~~~~e~~~~~~~l~~~~ 363 (363)
T TIGR01437 313 TAADVVQALRQGEPAIYTRGYKAN-------------------EGIIEIDPRS-VTGGQLDIIVERIREIV 363 (363)
T ss_pred CHHHHHHHHhcCCCCEEEeeeeec-------------------CCeEEEEeec-CCHHHHHHHHHHHHHhC
Confidence 7889999996 533332222221 3788999886 66999999999998763
No 75
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.97 E-value=1.8e-29 Score=233.51 Aligned_cols=330 Identities=16% Similarity=0.125 Sum_probs=239.7
Q ss_pred CCCCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCC-cEEEe-CChhHHHHHHHHHhHhh
Q psy8850 4 SATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPR-EIIWT-SGATESNNLAIKGAAHF 81 (397)
Q Consensus 4 ~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~-~i~~~-~g~t~a~~~~l~~l~~~ 81 (397)
++++..|++|++++.+....... ....+..+.+.++++++.++++++++++ +|+|+ +|+|.++++++.++.
T Consensus 9 pGP~~~~~~v~~a~~~~~~~~~~-----~~hr~~~f~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l~-- 81 (361)
T TIGR01366 9 SGPSKVRLEQLQALTTTAASLFG-----TSHRQAPVKNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGLI-- 81 (361)
T ss_pred CCCcCCCHHHHHHHHhcCccccc-----cCcCChHHHHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhcc--
Confidence 45566778888887643211111 1233557788999999999999999644 68885 669999999999886
Q ss_pred hccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHH
Q psy8850 82 YKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGEL 161 (397)
Q Consensus 82 ~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l 161 (397)
.+ +.+++...+|.+...........+.++..++.+....++ ..+.+++++|+++|.+|.||.+.|+++|
T Consensus 82 --~~-~~l~i~~G~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~lV~~~h~et~tG~~~pi~~I--- 150 (361)
T TIGR01366 82 --EK-KSLHLSFGEFSSKFAKAVKLAPWLGEPIIVTADPGSAPE-----PQADPGVDVIAWAHNETSTGVAVPVRRP--- 150 (361)
T ss_pred --cc-cccEEecCHHHHHHHHHHHhhhccCCceEEecCCCCCCC-----CccCCCCCEEEEcccCCccceecccccc---
Confidence 33 455666677776666655544333367777766543333 2456789999999999999999999888
Q ss_pred HHhcCcEEEEecccccCccccccCcccccEEEeccccccC-CCCceEEEEecCCCCccccccccCCc-------------
Q psy8850 162 CRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYG-PKGIGALYIRRNPRTRIEAQIHGGGH------------- 227 (397)
Q Consensus 162 ~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~~s~~K~~g-~~g~g~~~~~~~~~~~~~~~~~~~~~------------- 227 (397)
+|++|+++++|+++++|..++|+.. +|++++|.||++| ++|+++++++++..+++.+...++..
T Consensus 151 ~~~~g~~~iVDavqs~g~~~idv~~--~D~~~~s~~K~lg~~~Gl~~~~~s~~~~~~~~~~~~~~~~~p~~~d~~~~~~~ 228 (361)
T TIGR01366 151 EGSDDALVVIDATSGAGGLPVDIAE--TDVYYFAPQKNFASDGGLWLAIMSPAALERIEAIAASGRWVPEFLSLPTAVDN 228 (361)
T ss_pred cccCCCeEEEEcCccccCCCCCHHH--CCEEEEEchhhcCCCCceEEEEECHHHHhhhhcccCCCCCCchhhhHHHHHhc
Confidence 5899999999999999999999884 8999999999555 55778888898777666544332210
Q ss_pred -cccccCCCCchhHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCC-CCCCCCceEEEEec-CCC
Q psy8850 228 -EYGLRSGTLATHQIVGMGEAFRLARI--EMKEELKRILFLQKRLYNGLMESIEEIYINGD-MNNRIPHNLNISFN-FIE 302 (397)
Q Consensus 228 -~~~~~~~~~~~~~~~~l~~al~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~ 302 (397)
......++++...++++.++++++.+ +++.+.++..++.+++++.+.+ ++.+.++.. +.........+.|+ +.+
T Consensus 229 ~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~-~~~~~~~~~~~~~~s~~v~~v~~~~g~~ 307 (361)
T TIGR01366 229 SLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQE-RPYATPFVTDPGKRSQVVGTIDFVDDID 307 (361)
T ss_pred cccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHh-CCCcccCCCChhhcccceEEEECCCccC
Confidence 01234567778888899999999865 4899999999999999999999 665555532 21122333445554 456
Q ss_pred hHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHH
Q psy8850 303 GESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 303 ~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 373 (397)
..++...|. ||.+.++.. . ...+.+|+|+..++|.+||++++++|+++++++
T Consensus 308 ~~~v~~~L~~~gI~i~~~~~-------------~------l~~~~vRis~~~~~t~~di~~l~~al~~~~~~~ 361 (361)
T TIGR01366 308 AATVAKILRANGIVDTEPYR-------------K------LGRNQLRVAMFPAIDPDDVEALTECVDWVVERL 361 (361)
T ss_pred HHHHHHHHHHCCCeeccCcc-------------c------cCCCcEEEEcCCCCCHHHHHHHHHHHHHHHhhC
Confidence 777877776 787754420 0 113689999999999999999999999987653
No 76
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.97 E-value=1.8e-29 Score=237.51 Aligned_cols=315 Identities=14% Similarity=0.104 Sum_probs=221.6
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHh----CC--CCC-cEEEeCChhHHHHHHHHHhHh
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLI----YA--DPR-EIIWTSGATESNNLAIKGAAH 80 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~~--~~~-~i~~~~g~t~a~~~~l~~l~~ 80 (397)
++++.+.+++.+.+.... . . .|.. .....++++++++++ |. +++ +|++|+|+++|+..++.++.
T Consensus 44 ~~~~~~~~~~~~~~~~~~--~-~-~Y~~----~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~~i~~~~~~~~- 114 (385)
T PRK09276 44 PTPDHIIEAMCKAVEDPE--N-H-QYPS----YEGMLEFRKAVADWYKRRFGVELDPETEVISLIGSKEGIAHIPLAFV- 114 (385)
T ss_pred CCCHHHHHHHHHHHhCCC--C-C-CCCC----CCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhC-
Confidence 457788888888775311 0 0 1211 123455666666665 53 555 48899999999999999887
Q ss_pred hhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCC--CCCCCHHHHHHHhcCCceEEEEecccCcccccccH---
Q psy8850 81 FYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN--NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPI--- 155 (397)
Q Consensus 81 ~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l--- 155 (397)
++||.|++++|+|+.+...+... |.+++.+|.+. ++.+|++++++.+.+++++|++++|+||||.++|.
T Consensus 115 ---~~gd~Vl~~~P~y~~~~~~~~~~---g~~~~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~ 188 (385)
T PRK09276 115 ---NPGDVVLVPDPGYPVYKIGTIFA---GGEPYFMPLKEENGFLPDLDAIPEDVAKKAKLMFINYPNNPTGAVADLEFF 188 (385)
T ss_pred ---CCCCEEEEcCCCCcChHHHHHHc---CCEEEEEecCCCCCCcCCHHHHHHhccccceEEEEeCCCCCCCCCCCHHHH
Confidence 79999999999999998877776 99999999864 34579999999988899999999999999999994
Q ss_pred HHHHHHHHhcCcEEEEecccccCc----cccccCc----ccccEEEeccccccCCCC--ceEEEEecCCCCccccccccC
Q psy8850 156 LEIGELCRSKGVIFHCDAAQAVGK----IDINIQN----YKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGG 225 (397)
Q Consensus 156 ~~i~~l~~~~gi~livD~a~~~~~----~~~~~~~----~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~ 225 (397)
++|+++|++||++||+|++|.... ....+.. .+..+++.|++|.+|.+| +|+++++++..+.+......
T Consensus 189 ~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~i~~~~l~~~~~~~~~~- 267 (385)
T PRK09276 189 EEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVGNADLIAGLGKVKSN- 267 (385)
T ss_pred HHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCcchhheeeeCCHHHHHHHHHHHhh-
Confidence 788888999999999999997321 1111111 134688899999777667 89999887665555432210
Q ss_pred CccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecC-CChH
Q psy8850 226 GHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF-IEGE 304 (397)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 304 (397)
. ..+.+.....+...+++....++++..+++.++++++.+.|++ + ++.+..+.+ +..+++.++. .+..
T Consensus 268 -----~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-~~~~~~~~~---~~~~~v~~~~~~~~~ 336 (385)
T PRK09276 268 -----V-DSGVFQAIQEAGIAALNGPQEVVEELRKIYQERRDILVEGLRK-L-GLEVEPPKA---TFYVWAPVPKGYTSA 336 (385)
T ss_pred -----c-cCCCCHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHh-C-CCcccCCCc---ceEEEEECCCCCCHH
Confidence 0 1122223333333455433445677888899999999999998 4 666554432 3345677653 4567
Q ss_pred HHHHHhC---CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHH
Q psy8850 305 SLLMAIK---DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 368 (397)
Q Consensus 305 ~~~~~l~---~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~ 368 (397)
++...+. ||.+.+|..|.. ...+++||+++. +++++++.+++|.+
T Consensus 337 ~l~~~ll~~~gi~v~~g~~f~~-----------------~~~~~~Ris~~~--~~~~l~~~l~~l~~ 384 (385)
T PRK09276 337 EFATLLLDKAGVVVTPGNGFGE-----------------YGEGYFRIALTV--PDERIEEAVERIKK 384 (385)
T ss_pred HHHHHHHHhCCEEECCchhhCC-----------------CCCCeEEEEeCC--CHHHHHHHHHHHhh
Confidence 7777652 899999865532 013789999974 67888888777753
No 77
>PRK07179 hypothetical protein; Provisional
Probab=99.97 E-value=3.3e-29 Score=237.08 Aligned_cols=317 Identities=15% Similarity=0.213 Sum_probs=230.8
Q ss_pred CCHHHHHHHHHHHhhccCCCCC-CCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCC
Q psy8850 9 IDPRVVDKMIPYLRVQFGNPAS-RNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGK 87 (397)
Q Consensus 9 ~~~~v~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~ 87 (397)
.+|++++++.+++.++..+++. ..+..+ .+...++++.+++++|.+ .+++++||++|+..+++++. .+|+
T Consensus 69 ~~p~v~~a~~~~~~~~~~~~~~s~~~~~~---~~~~~~le~~la~~~g~~--~~~~~~sG~~An~~~l~~l~----~~g~ 139 (407)
T PRK07179 69 GHPDIIKAQIAALQEEGDSLVMSAVFLHD---DSPKPQFEKKLAAFTGFE--SCLLCQSGWAANVGLLQTIA----DPNT 139 (407)
T ss_pred CCHHHHHHHHHHHHHhCCCCCccccccCC---chHHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHhC----CCCC
Confidence 4689999999999876545432 123222 236678889999999986 56889999999999999888 6889
Q ss_pred EEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcC-CceEEEEecccCcccccccHHHHHHHHHhcC
Q psy8850 88 HIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS-DTILVSVMLVNNEIGVIQPILEIGELCRSKG 166 (397)
Q Consensus 88 ~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~g 166 (397)
.|+++..+|.+....+... |.++..++. .|++++++++++ ++++|++++++||+|.+.|+++|.++|++||
T Consensus 140 ~v~~~~~~h~s~~~~~~~~---g~~~~~~~~-----~d~~~l~~~l~~~~~~lV~v~~v~n~tG~i~pl~~I~~l~~~~~ 211 (407)
T PRK07179 140 PVYIDFFAHMSLWEGVRAA---GAQAHPFRH-----NDVDHLRRQIERHGPGIIVVDSVYSTTGTIAPLADIVDIAEEFG 211 (407)
T ss_pred EEEEECCcCHHHHHHHHHC---CCeEEEecC-----CCHHHHHHHHHhcCCeEEEECCCCCCCCccccHHHHHHHHHHcC
Confidence 9999999999997766555 777765543 489999999976 5889999999999999999999999999999
Q ss_pred cEEEEecccccCccc---------cccCcccccEEEeccccccCCCCceEEEEecCCCCccccccccCCccccccCCCCc
Q psy8850 167 VIFHCDAAQAVGKID---------INIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLA 237 (397)
Q Consensus 167 i~livD~a~~~~~~~---------~~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (397)
+++|+|++|+.|... ++.. ..+|++++|++|.+|+. +|+++++++....+...... ....++.+
T Consensus 212 ~~livDea~~~g~~g~~g~g~~~~~~~~-~~vdi~~~S~sK~~g~~-~G~l~~~~~~~~~~~~~~~~-----~~~~~t~~ 284 (407)
T PRK07179 212 CVLVVDESHSLGTHGPQGAGLVAELGLT-SRVHFITASLAKAFAGR-AGIITCPRELAEYVPFVSYP-----AIFSSTLL 284 (407)
T ss_pred CEEEEECcccccCcCCCCCchHHhcCCC-CCCCEEEeechHhhhcc-CeEEEeCHHHHHHHHHhCcC-----eeeCCCCC
Confidence 999999999865431 1111 14699999999966664 79999886554433211100 11234556
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCC-ChHHHHHHhC--CcE
Q psy8850 238 THQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFI-EGESLLMAIK--DIA 314 (397)
Q Consensus 238 ~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~--~i~ 314 (397)
...++++.++++.... ..+..+++.++++++++.|++ + ++.+.+. ..++.+.++.. +...+.+.|. ||.
T Consensus 285 ~~~~aa~~aal~~~~~-~~~~~~~l~~~~~~l~~~L~~-~-g~~v~~~-----~~i~~l~~~~~~~~~~~~~~L~~~GI~ 356 (407)
T PRK07179 285 PHEIAGLEATLEVIES-ADDRRARLHANARFLREGLSE-L-GYNIRSE-----SQIIALETGSERNTEVLRDALEERNVF 356 (407)
T ss_pred HHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHH-c-CCCCCCC-----CCEEEEEeCCHHHHHHHHHHHHHCCce
Confidence 6667777777877643 356788999999999999998 5 6554422 34556665432 3345655664 766
Q ss_pred ecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHH
Q psy8850 315 VSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 315 ~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 373 (397)
+. .++.+.. ....+.+||+++..+|++||++++++|++++++.
T Consensus 357 ~~--~~~~p~~--------------~~~~~~lRis~~~~~t~edi~~~~~~l~~~~~~~ 399 (407)
T PRK07179 357 GA--VFCAPAT--------------PKNRNLIRLSLNADLTASDLDRVLEVCREARDEV 399 (407)
T ss_pred Ee--eecCCCC--------------CCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhh
Confidence 32 2233310 1124789999999999999999999999887653
No 78
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.97 E-value=2.3e-29 Score=234.01 Aligned_cols=316 Identities=20% Similarity=0.208 Sum_probs=227.7
Q ss_pred CHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEE
Q psy8850 10 DPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHI 89 (397)
Q Consensus 10 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~v 89 (397)
+|++++++++.++. +++... .+.......+...++++.++++++.+ ..+++++|++++..++.++. ++||+|
T Consensus 17 ~~~v~~a~~~~~~~-~~~~~~-~~~~~~~~~~~~~~l~~~la~~~~~~--~~iv~~sg~~a~~~~~~~~~----~~gd~V 88 (349)
T cd06454 17 HPEVIEAAKEALDK-YGVGAG-GSRLISGTSDLHEELEEELAEFHGKE--AALVFSSGYAANDGVLSTLA----GKGDLI 88 (349)
T ss_pred CHHHHHHHHHHHHH-hCCCCC-CcCeecCCchHHHHHHHHHHHHhCCC--CEEEeccHHHHHHHHHHHhc----CCCCEE
Confidence 79999999999976 333222 22222234567889999999999986 35666777889888888776 789999
Q ss_pred EEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcC-----CceEEEEecccCcccccccHHHHHHHHHh
Q psy8850 90 ITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS-----DTILVSVMLVNNEIGVIQPILEIGELCRS 164 (397)
Q Consensus 90 l~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~-----~~~~v~~~~~~~~tG~~~~l~~i~~l~~~ 164 (397)
++++++|+++...+... |.+++.++. +|.+++++++++ +++++++++++|+||...|+++|+++|++
T Consensus 89 l~~~~~~~~~~~~~~~~---g~~~~~~~~-----~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~ 160 (349)
T cd06454 89 ISDSLNHASIIDGIRLS---GAKKRIFKH-----NDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAPLPELVDLAKK 160 (349)
T ss_pred EEehhhhHHHHHHHHHc---CCceEEecC-----CCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccCHHHHHHHHHH
Confidence 99999999987776655 888887763 478889888864 57889999999999999999999999999
Q ss_pred cCcEEEEecccccCccc--------cccCcccccEEEeccccccCCCCceEEEEecCCCCccccccccCCccccccCCCC
Q psy8850 165 KGVIFHCDAAQAVGKID--------INIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTL 236 (397)
Q Consensus 165 ~gi~livD~a~~~~~~~--------~~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (397)
+|+++|+|++|+.|... .+....+.|+++.|+||.+++.| |+++.+++....+...... . ...++.
T Consensus 161 ~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g-G~i~~~~~~~~~~~~~~~~----~-~~~~~~ 234 (349)
T cd06454 161 YGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGAVG-GYIAGSKELIDYLRSYARG----F-IFSTSL 234 (349)
T ss_pred cCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhcccC-CEEECCHHHHHHHHHhchh----h-hccCCC
Confidence 99999999999865432 12233468999999999777665 8887776554443322111 0 112345
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEec-CCChHHHHHHhC--Cc
Q psy8850 237 ATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN-FIEGESLLMAIK--DI 313 (397)
Q Consensus 237 ~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~--~i 313 (397)
+...++++.++++...+ ...+.+++.++++++.+.|.+ + ++.+..++. ..+..+.++ ..+..++.+.|. ||
T Consensus 235 ~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~l~~~l~~-~-g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~L~~~gI 308 (349)
T cd06454 235 PPAVAAAALAALEVLQG-GPERRERLQENVRYLRRGLKE-L-GFPVGGSPS---HIIPPLIGDDPAKAVAFSDALLERGI 308 (349)
T ss_pred CHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHh-c-CCcccCCCC---CcEEEEeCCChHHHHHHHHHHHhCCc
Confidence 66667777788887654 466788999999999999988 4 555554322 223333333 234567777776 78
Q ss_pred EecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHH
Q psy8850 314 AVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (397)
Q Consensus 314 ~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 369 (397)
.+.++..... ....+.||++++.+++++++++++++|+++
T Consensus 309 ~~~~~~~~~~----------------~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 309 YVQAIRYPTV----------------PRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred eEEEecCCcc----------------CCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 8776422110 112378999999889999999999999864
No 79
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.97 E-value=5e-29 Score=235.41 Aligned_cols=322 Identities=16% Similarity=0.146 Sum_probs=227.9
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCC------CCCcEEEeCChhHHHHHHHHHhHhh
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYA------DPREIIWTSGATESNNLAIKGAAHF 81 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~------~~~~i~~~~g~t~a~~~~l~~l~~~ 81 (397)
++++.+++++.+.+..... ..|.......++++.++++++. ++++|++|+|+|+|+.+++.++.
T Consensus 48 ~~~~~~~~~~~~~l~~~~~--------~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ii~t~G~t~al~~~~~~l~-- 117 (403)
T TIGR01265 48 RTDPEAEEAVKDALRSGKF--------NGYAPSVGALAAREAVAEYLSSDLPGKLTADDVVLTSGCSQAIEICIEALA-- 117 (403)
T ss_pred CCCHHHHHHHHHHHhcCCC--------CCCCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecChHHHHHHHHHHhC--
Confidence 5678999999888754211 0122233567788888888874 56789999999999999999987
Q ss_pred hccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccC--CCCCCCHHHHHHHhcCCceEEEEecccCccccccc---HH
Q psy8850 82 YKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPK--NNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---IL 156 (397)
Q Consensus 82 ~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~---l~ 156 (397)
++||+|++++++|+.+...+... |.+++.++.+ .++.+|++++++++.++++++++++++||||.+++ ++
T Consensus 118 --~~gd~Vlv~~p~y~~~~~~~~~~---g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~ 192 (403)
T TIGR01265 118 --NPGANILVPRPGFPLYDTRAAFS---GLEVRLYDLLPEKDWEIDLDGLEALADEKTVAIVVINPSNPCGSVFSRDHLQ 192 (403)
T ss_pred --CCCCEEEEeCCCchhHHHHHHHc---CCEEEEecCCcccCCccCHHHHHHHhCcCccEEEEecCCCCCCCCCCHHHHH
Confidence 78999999999999887666555 8999998875 34679999999999989999999999999999987 78
Q ss_pred HHHHHHHhcCcEEEEecccccCcc---c-cccCcc---cccEEEeccccccCCCC--ceEEEEec--CCCCc-ccccccc
Q psy8850 157 EIGELCRSKGVIFHCDAAQAVGKI---D-INIQNY---KVDLMSFSAHKIYGPKG--IGALYIRR--NPRTR-IEAQIHG 224 (397)
Q Consensus 157 ~i~~l~~~~gi~livD~a~~~~~~---~-~~~~~~---~~d~~~~s~~K~~g~~g--~g~~~~~~--~~~~~-~~~~~~~ 224 (397)
+|+++|+++|+++|+|++|+.... + ..+..+ ...+++.|++|.++.+| +|++++.+ ..... +...+..
T Consensus 193 ~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~ 272 (403)
T TIGR01265 193 KIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGISKRWVVPGWRLGWIIIHDPHGIFRDTVLQGLKN 272 (403)
T ss_pred HHHHHHHHCCCEEEEEccccccccCCCCccchhhhccCCcEEEEeecccccCCCcceEEEEEEeCchhhhHHHHHHHHHH
Confidence 899999999999999999873221 1 111111 23577899999655445 78888753 21111 1111000
Q ss_pred CCccccccCCCCchhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecC---
Q psy8850 225 GGHEYGLRSGTLATHQIVGMGEAFRL-ARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF--- 300 (397)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~l~~al~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 300 (397)
. ... ...++.....++..+++. ....+++..+++.++++.+.+.|+. ++++.+..+.. +..+++.++.
T Consensus 273 ~---~~~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~p~~---g~f~~~~~~~~~~ 344 (403)
T TIGR01265 273 L---LQR-ILGPATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKD-IPGLVCPKPEG---AMYLMVKLELELF 344 (403)
T ss_pred H---hhh-hcCCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhc-CCCceecCCCc---eeEEEEecccccc
Confidence 0 000 012344444555556643 2345777888899999999999988 66765444333 4566676653
Q ss_pred ---CChHHHHHHh-C--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHH
Q psy8850 301 ---IEGESLLMAI-K--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 301 ---~~~~~~~~~l-~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 373 (397)
.+..++...+ . ||.+.+|..|.. .++|||+++. +++++++.+++|.+++.++
T Consensus 345 ~~~~~~~~~~~~l~~~~gv~v~pg~~f~~-------------------~~~iRis~~~--~~~~l~~~l~~l~~~~~~~ 402 (403)
T TIGR01265 345 PEIKDDVDFCEKLVREESVICLPGSAFGL-------------------PNWVRITITV--PESMLEEACSRIKEFCERH 402 (403)
T ss_pred CCCCCHHHHHHHHHHhCCEEEeCccccCC-------------------CCeEEEEecC--CHHHHHHHHHHHHHHHHhc
Confidence 1456776664 2 899999975532 3889999985 6889999999998887653
No 80
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.97 E-value=1.3e-29 Score=235.60 Aligned_cols=305 Identities=15% Similarity=0.128 Sum_probs=222.7
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCC
Q psy8850 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRG 86 (397)
Q Consensus 7 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g 86 (397)
.++|+.+++++.+.+.....+|. ....++++.+++++++++++|++|+|+++++.+++.++. ++|
T Consensus 41 ~~~~~~v~~a~~~~~~~~~~Yp~-----------~g~~~Lr~aia~~~~~~~~~I~vt~Gs~e~i~~~~~~l~----~~g 105 (366)
T PRK01533 41 FGCSPRVLDELQKSWLDHALYPD-----------GGATTLRQTIANKLHVKMEQVLCGSGLDEVIQIISRAVL----KAG 105 (366)
T ss_pred CCCCHHHHHHHHHHHHhcCcCCC-----------CCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHhc----CCC
Confidence 35788999999887654221221 135679999999999999999999999999999999987 799
Q ss_pred CEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHH---HHH
Q psy8850 87 KHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGE---LCR 163 (397)
Q Consensus 87 ~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~---l~~ 163 (397)
|+|+++.|+|+.+...+... |.+++.+|.++ +.+|+++++++++++++++++++|+||||.+++.+++.+ +|+
T Consensus 106 d~vlv~~P~y~~~~~~~~~~---g~~v~~v~~~~-~~~d~~~l~~~~~~~~~~v~i~~P~NPTG~~~~~~~l~~l~~~~~ 181 (366)
T PRK01533 106 DNIVTAGATFPQYRHHAIIE---GCEVKEVALNN-GVYDLDEISSVVDNDTKIVWICNPNNPTGTYVNDRKLTQFIEGIS 181 (366)
T ss_pred CEEEEcCCcHHHHHHHHHHc---CCEEEEeecCC-CCcCHHHHHHHhCcCCcEEEEeCCCCCCCCCcCHHHHHHHHHhCC
Confidence 99999999999998887766 99999999864 458999999999889999999999999999999765544 455
Q ss_pred hcCcEEEEecccccCcc------ccc-cCcccccEEEeccccccCCCC--ceEEEEecCCCCccccccccCCccccccCC
Q psy8850 164 SKGVIFHCDAAQAVGKI------DIN-IQNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLRSG 234 (397)
Q Consensus 164 ~~gi~livD~a~~~~~~------~~~-~~~~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (397)
+++ ++|+|++|..... ... +...+..+++.|++|.+|.+| +|+++++++..+.+..... ..
T Consensus 182 ~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~~~~~~~l~~~~~---------~~ 251 (366)
T PRK01533 182 ENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGHEELIEKLNVVRL---------PF 251 (366)
T ss_pred CCC-EEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCCHHHHHHHHHhcC---------CC
Confidence 555 6778999862111 011 112245688999999776555 7888887665555543321 12
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCChHHHHHHhC--C
Q psy8850 235 TLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAIK--D 312 (397)
Q Consensus 235 ~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~ 312 (397)
..+.....+..++++. .+..++..+...+.++++.+.++. + ++.+..+. +.++++.++ +..++.+.|. |
T Consensus 252 ~~~~~~q~aa~~~l~~-~~~~~~~~~~~~~~r~~~~~~l~~-~-g~~~~~~~----~nf~~~~~~--~~~~~~~~l~~~G 322 (366)
T PRK01533 252 NVSSLAQKAATIAFGD-DEFIEEIVRVNTEGLRQYESFCKE-N-EIPFYQSQ----TNFIFLPVE--NGGEIYEACAHAG 322 (366)
T ss_pred CcCHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHh-C-CCccCCCc----CcEEEEeCC--CHHHHHHHHHHCC
Confidence 3444555555566642 234566677778888888888887 4 55554432 456667664 4566777765 8
Q ss_pred cEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHHHhc
Q psy8850 313 IAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKLREL 376 (397)
Q Consensus 313 i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~ 376 (397)
|.+++ | + +++||+++ +.+++++++++|+++++-.+++
T Consensus 323 I~Vr~---~-~--------------------~~iRis~~---~~~~~~~l~~al~~~~~~~~~~ 359 (366)
T PRK01533 323 FIIRP---F-P--------------------NGVRITVG---TREQNEGVISVLQQHFENKKRK 359 (366)
T ss_pred cEEcc---C-C--------------------CceEEeCC---CHHHHHHHHHHHHHHHHhcccc
Confidence 88874 1 2 77999998 6899999999999887554443
No 81
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.97 E-value=1.7e-29 Score=235.02 Aligned_cols=308 Identities=13% Similarity=0.076 Sum_probs=226.6
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCC-CcEEEeCChhHHHHHHHHHhHhhhccCC
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADP-REIIWTSGATESNNLAIKGAAHFYKKRG 86 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~-~~i~~~~g~t~a~~~~l~~l~~~~~~~g 86 (397)
++|+.+++++.+.+.... .. .|.. ....++++.++++++.++ ++|++|+|+++++.+++.++. ++|
T Consensus 39 ~~~~~~~~~~~~~~~~~~---~~-~Y~~-----~~~~~lr~~ia~~~~~~~~~~I~~t~G~~~~i~~~~~~~~----~~g 105 (356)
T PRK04870 39 RLPAELRAELGERLAEVA---LN-RYPD-----PRAAALKAALRAAMGVPAGADVLLGNGSDELIQLLALACA----KPG 105 (356)
T ss_pred CCCHHHHHHHHHHhhccc---cc-cCCC-----CCHHHHHHHHHHHhCcCCCCcEEEcCCHHHHHHHHHHHhc----CCC
Confidence 578999999998875310 00 1111 135789999999999865 479999999999999999887 799
Q ss_pred CEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcC-CceEEEEecccCcccccccHHHHHHHHHhc
Q psy8850 87 KHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS-DTILVSVMLVNNEIGVIQPILEIGELCRSK 165 (397)
Q Consensus 87 ~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~ 165 (397)
|+|+++.|+|+.+...+... |.+++.+|.++++.+|++++++++.+ +++++++++++||||.++|.+++.++++..
T Consensus 106 d~vlv~~P~y~~~~~~~~~~---g~~~~~i~~~~~~~~d~~~l~~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~~ 182 (356)
T PRK04870 106 ATVLAPEPGFVMYRMSAKLA---GLEFVGVPLTADFTLDLPAMLAAIAEHRPALVFLAYPNNPTGNLFDDADVERIIEAA 182 (356)
T ss_pred CEEEECCCCHHHHHHHHHHc---CCEEEEecCCCCCCCCHHHHHHHhhcCCCCEEEEcCCCCCCCCCCCHHHHHHHHHHC
Confidence 99999999999887776666 99999999987788999999999864 899999999999999999988888887776
Q ss_pred CcEEEEecccccCcc---ccccCcccccEEEeccccccCCCC--ceEEEEecCCCCccccccccCCccccccCCCCchhH
Q psy8850 166 GVIFHCDAAQAVGKI---DINIQNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQ 240 (397)
Q Consensus 166 gi~livD~a~~~~~~---~~~~~~~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (397)
++++|+|++|..... ...+...+..+++.|++| +|.+| +|+++++++..+.+......+ ..+...
T Consensus 183 ~~~ii~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK-~~~~GlRiG~~i~~~~~i~~~~~~~~~~---------~~~~~~ 252 (356)
T PRK04870 183 PGLVVVDEAYQPFAGDSWLPRLARFPNLLVMRTVSK-LGLAGLRLGYLAGHPAWIAELDKVRPPY---------NVNVLT 252 (356)
T ss_pred CCEEEEECCchhhcCcchHHHHhhCCCEEEEecchh-hhhHHHhhhhhhCCHHHHHHHHHccCCC---------cCCHHH
Confidence 889999999862111 111222245688999999 56555 899988876555554332111 223333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCChHHHHHHhC--CcEeccc
Q psy8850 241 IVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAIK--DIAVSSG 318 (397)
Q Consensus 241 ~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~i~~~~g 318 (397)
..+...+++. .+.+++..++++++++++.+.|++ ++++.+. ++. +.++++.++ +..++...|. ||.+.++
T Consensus 253 q~~a~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~-~~~---~~~~~~~~~--~~~~~~~~l~~~gI~v~~~ 324 (356)
T PRK04870 253 QATALFALEH-VDVLDAQAAQLRAERTRLAAALAA-LPGVTVF-PSA---ANFILVRVP--DAAAVFDGLKTRGVLVKNL 324 (356)
T ss_pred HHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHHHh-CCCcEEC-CCC---CeEEEEECC--CHHHHHHHHHHCCEEEEEC
Confidence 3333344443 234677788889999999999988 7787553 222 446666665 4566766665 8999987
Q ss_pred CccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHH
Q psy8850 319 SACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (397)
Q Consensus 319 ~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 369 (397)
..+.. ...+++||+++ +.+++++++++|+++
T Consensus 325 ~~f~~-----------------~~~~~iRis~~---~~~~~~~l~~al~~~ 355 (356)
T PRK04870 325 SGMHP-----------------LLANCLRVTVG---TPEENAQFLAALKAA 355 (356)
T ss_pred CCCCC-----------------CCCCeEEEeCC---CHHHHHHHHHHHHHh
Confidence 65432 11379999998 689999999999875
No 82
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.97 E-value=2.4e-29 Score=236.97 Aligned_cols=314 Identities=16% Similarity=0.163 Sum_probs=217.1
Q ss_pred CCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHh----C--CCCC-cEEEeCChhHHHHHHHHHhHhh
Q psy8850 9 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLI----Y--ADPR-EIIWTSGATESNNLAIKGAAHF 81 (397)
Q Consensus 9 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~--~~~~-~i~~~~g~t~a~~~~l~~l~~~ 81 (397)
+|+.+.+++.+.+... . .+ .|.......++++++++++ + ++++ +|++|+|+++|+..++.++.
T Consensus 49 ~p~~~~~~~~~~~~~~----~--~~--~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~al~~~~~~~~-- 118 (394)
T PRK05942 49 APQPVIEAAIAALADP----Q--NH--GYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKEGLTHLALAYV-- 118 (394)
T ss_pred CCHHHHHHHHHHHhCC----C--Cc--cCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHHHHHHHHHHhC--
Confidence 4566777776665421 0 11 1122233456666666665 5 3566 48899999999999999887
Q ss_pred hccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCC--CCCCCHHHHHHHhcCCceEEEEecccCccccccc---HH
Q psy8850 82 YKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN--NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---IL 156 (397)
Q Consensus 82 ~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~---l~ 156 (397)
++||+|++++|+|+.+...+... |.+++.+|.+. ++.+|++++++.+.++++++++++|+||||.+++ ++
T Consensus 119 --~~gd~Vlv~~P~y~~~~~~~~~~---g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~P~NPtG~~~s~~~~~ 193 (394)
T PRK05942 119 --NPGDVVLVPSPAYPAHFRGPLIA---GAQIYPIILKPENDWLIDLSSIPEEVAQQAKILYFNYPSNPTTATAPREFFE 193 (394)
T ss_pred --CCCCEEEEcCCCCcchHHHHHHc---CCEEEEeecCCccCCccCHHHHHHhccccceEEEEcCCCCCCCCcCCHHHHH
Confidence 89999999999999988777666 99999999874 3469999999999889999999999999999999 67
Q ss_pred HHHHHHHhcCcEEEEecccccCcc----ccc---cCc-ccccEEEeccccccCCCC--ceEEEEecCCCCccccccccCC
Q psy8850 157 EIGELCRSKGVIFHCDAAQAVGKI----DIN---IQN-YKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGG 226 (397)
Q Consensus 157 ~i~~l~~~~gi~livD~a~~~~~~----~~~---~~~-~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~ 226 (397)
+|+++|++||++||+|++|..... ... +.. .+..+++.|++|.+|.+| +|+++.+++..+.+......
T Consensus 194 ~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~~~~l~~~l~~~~~~-- 271 (394)
T PRK05942 194 EIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVGNRHIIQGLRTLKTN-- 271 (394)
T ss_pred HHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhhheeeeecCHHHHHHHHHHHhh--
Confidence 888999999999999999873221 111 111 134577899999666555 89999887666555433211
Q ss_pred ccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecC-CChHH
Q psy8850 227 HEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF-IEGES 305 (397)
Q Consensus 227 ~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 305 (397)
. ..+.+.....++..+++...+++++.++++.++++++.+.|++ + ++.+..+.+ +.++++.++. .+..+
T Consensus 272 ----~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~-~-~~~~~~~~~---~~f~~~~~~~~~~~~~ 341 (394)
T PRK05942 272 ----L-DYGIFSALQKAAETALQLPDSYLQQVQERYRTRRDFLIQGLGE-L-GWNIPPTKA---TMYLWVPCPVGMGSTD 341 (394)
T ss_pred ----c-ccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH-C-CCeecCCCe---eeEEEEECCCCCCHHH
Confidence 0 1122333344455666655556788889999999999999988 4 665554322 3356677763 45566
Q ss_pred HHHH-hC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHH
Q psy8850 306 LLMA-IK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 368 (397)
Q Consensus 306 ~~~~-l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~ 368 (397)
+... +. ||.+.+|..|.. ...++|||+++. +.+.+.+.+++|.+
T Consensus 342 ~~~~~l~~~gV~v~~g~~f~~-----------------~~~~~iRis~~~--~~~~l~~~l~~l~~ 388 (394)
T PRK05942 342 FALNVLQKTGVVVTPGNAFGE-----------------GGEGYVRISLIA--DCDRLGEALDRLKQ 388 (394)
T ss_pred HHHHHHHHCCEEEeCChhhCc-----------------CCCCeEEEEecC--CHHHHHHHHHHHHH
Confidence 6654 32 899998865432 113799999973 45555555555543
No 83
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.97 E-value=3.5e-29 Score=236.43 Aligned_cols=325 Identities=14% Similarity=0.108 Sum_probs=225.3
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHh------CCCCCcEEEeCChhHHHHHHHHHhHh
Q psy8850 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLI------YADPREIIWTSGATESNNLAIKGAAH 80 (397)
Q Consensus 7 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~------~~~~~~i~~~~g~t~a~~~~l~~l~~ 80 (397)
.++|+.+++++.+.+..... . .| .......++++++++++ ++++++|++|+|+++|+.+++.++.
T Consensus 48 ~~~p~~~~~a~~~~~~~~~~---~-~Y----~~~~G~~~lr~aia~~~~~~~g~~~~~~~I~it~G~~~al~~~~~~l~- 118 (409)
T PLN00143 48 FRTTNIAEDAIVEAVRSAKF---N-SY----APTGGILPARRAIADYLSNDLPYQLSPDDVYLTLGCKHAAEIIIKVLA- 118 (409)
T ss_pred CCCCHHHHHHHHHHHhCcCC---C-CC----CCCCCCHHHHHHHHHHHHhhcCCCCCHhhEEEecChHHHHHHHHHHHc-
Confidence 57789999999988764110 0 12 11223456777777776 3577899999999999999999988
Q ss_pred hhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccC--CCCCCCHHHHHHHhcCCceEEEEecccCccccccc---H
Q psy8850 81 FYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPK--NNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---I 155 (397)
Q Consensus 81 ~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~---l 155 (397)
++||.|++..|+|+.+....... |.++..++.+ +++.+|++++++++.++++++++++|+||||.+++ +
T Consensus 119 ---~~gd~v~v~~P~y~~~~~~~~~~---g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~~nP~NPTG~~~s~~~~ 192 (409)
T PLN00143 119 ---RPEANILLPRPGFPDVETYAIFH---HLEIRHFDLLPEKGWEVDLDAVEAIADENTIAMVIINPGNPCGSVYSYEHL 192 (409)
T ss_pred ---CCCCEEEEcCCCCcCHHHHHHHc---CCEEEEEeccCCCCCcCCHHHHHHhcccCCEEEEEECCCCCCCCccCHHHH
Confidence 79999999999999998877776 9999999875 34568999999999888999999999999999999 5
Q ss_pred HHHHHHHHhcCcEEEEecccccCc---c---cc-ccCcccccEEEeccccccCCCC--ceEEEEe-cC-CCCc---cccc
Q psy8850 156 LEIGELCRSKGVIFHCDAAQAVGK---I---DI-NIQNYKVDLMSFSAHKIYGPKG--IGALYIR-RN-PRTR---IEAQ 221 (397)
Q Consensus 156 ~~i~~l~~~~gi~livD~a~~~~~---~---~~-~~~~~~~d~~~~s~~K~~g~~g--~g~~~~~-~~-~~~~---~~~~ 221 (397)
++|+++|++||++||+|++|.... . ++ .+......+++.|++|.++.+| +|+++++ ++ ..+. +...
T Consensus 193 ~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRvG~~v~~~p~~~~~~~~~~~~~ 272 (409)
T PLN00143 193 NKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGWGLGWLVTCDPSGLLQICEIADSI 272 (409)
T ss_pred HHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcccCcEEEEccchhhcCCCccceEEEEeeCchhhhhhHHHHHHH
Confidence 678888999999999999997321 1 11 1111134588999999765555 7888884 32 2211 1111
Q ss_pred cccCCccccccCCCCchhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecC
Q psy8850 222 IHGGGHEYGLRSGTLATHQIVGMGEAFRL-ARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF 300 (397)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~l~~al~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (397)
... ..... ..+.....++..+++. ....+++..+++++.++++.+.|.+ ++.......+.. +.++++.++.
T Consensus 273 ~~~----~~~~~-~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~-~~~~~~~~~p~g--g~f~w~~l~~ 344 (409)
T PLN00143 273 KKA----LNPAP-FPPTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKE-IPCIMCPQKAEG--AFFALVKLNL 344 (409)
T ss_pred HHH----HhccC-CCCchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCCCCCCe--eEEEEEecch
Confidence 000 00001 1233344444455542 2335677788888888889999988 654332222221 4566677652
Q ss_pred -----C-ChHHHHHHh-C--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHH
Q psy8850 301 -----I-EGESLLMAI-K--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVK 371 (397)
Q Consensus 301 -----~-~~~~~~~~l-~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 371 (397)
. +..++...+ . ||.+.+|..|.. .+++||+++. +.+++++.+++|.++++
T Consensus 345 ~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~-------------------~~~iRi~~~~--~~~~l~~al~rl~~~l~ 403 (409)
T PLN00143 345 LLLEDIEDDMEFCLKLAKEESLIILPGVTVGL-------------------KNWLRITFAV--EQSSLEDGLGRLKSFCG 403 (409)
T ss_pred hhcCCCCCHHHHHHHHHHhCCEEEeCccccCC-------------------CCeEEEEEcC--CHHHHHHHHHHHHHHHH
Confidence 1 345565444 3 999999965421 3789999984 68999999999999987
Q ss_pred HHHh
Q psy8850 372 KLRE 375 (397)
Q Consensus 372 ~~~~ 375 (397)
++.+
T Consensus 404 ~~~~ 407 (409)
T PLN00143 404 RHAK 407 (409)
T ss_pred Hhcc
Confidence 6654
No 84
>PRK08363 alanine aminotransferase; Validated
Probab=99.97 E-value=3.2e-29 Score=236.61 Aligned_cols=322 Identities=11% Similarity=0.112 Sum_probs=223.7
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHh----C--CCCCcEEEeCChhHHHHHHHHHhHhh
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLI----Y--ADPREIIWTSGATESNNLAIKGAAHF 81 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~--~~~~~i~~~~g~t~a~~~~l~~l~~~ 81 (397)
++++.+.+++.+.+.... . .|.. .....++++.+++++ | +++++|++|+|+++|+.+++.++.
T Consensus 46 ~p~~~~~~~~~~~~~~~~----~-~Y~~----~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~-- 114 (398)
T PRK08363 46 QPPEHMKEAYCRAIKEGH----N-YYGP----SEGLPELREAIVKREKRKNGVDITPDDVRVTAAVTEALQLIFGALL-- 114 (398)
T ss_pred CCCHHHHHHHHHHHHcCC----C-CCCC----CCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhC--
Confidence 468889999988775411 1 1211 234566777777776 3 577889999999999999999887
Q ss_pred hccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEe-ccCC-CCCCCHHHHHHHhcCCceEEEEecccCccccccc---HH
Q psy8850 82 YKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYL-KPKN-NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---IL 156 (397)
Q Consensus 82 ~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v-~~~~-~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~---l~ 156 (397)
++||.|+++.++|+.+...+... |.+++.+ +.++ ++.+|+++++++++++++++++++++||||.+++ ++
T Consensus 115 --~~gd~Vl~~~p~y~~~~~~~~~~---g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~ 189 (398)
T PRK08363 115 --DPGDEILIPGPSYPPYTGLVKFY---GGVPVEYRTIEEEGWQPDIDDIRKKITEKTKAIAVINPNNPTGALYEKKTLK 189 (398)
T ss_pred --CCCCEEEEcCCCCcchHHHHHHc---CCEEEEeccccccCCcCCHHHHHhhCCcceEEEEEECCCCCCCcCcCHHHHH
Confidence 79999999999999998877766 8888877 4543 4468999999999889999999999999999998 77
Q ss_pred HHHHHHHhcCcEEEEecccccCccc------cccCcccccEEEeccccccCCCC--ceEEEE--ecCCCCccccccccCC
Q psy8850 157 EIGELCRSKGVIFHCDAAQAVGKID------INIQNYKVDLMSFSAHKIYGPKG--IGALYI--RRNPRTRIEAQIHGGG 226 (397)
Q Consensus 157 ~i~~l~~~~gi~livD~a~~~~~~~------~~~~~~~~d~~~~s~~K~~g~~g--~g~~~~--~~~~~~~~~~~~~~~~ 226 (397)
+|+++|+++|+++|+|++|+..... ..+......+++.|++|.++.+| +|++++ +++..+.+........
T Consensus 190 ~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~~~l~~~~~~~~ 269 (398)
T PRK08363 190 EILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSLTKDVPVIVMNGLSKVYFATGWRLGYIYFVDPEGKLAEVREAIDKLA 269 (398)
T ss_pred HHHHHHHHcCeEEEEhhhhhhhccCCcccCHHHcCcCCcEEEEecchhccCCccceEEEEEEeCcHHHHHHHHHHHHHHh
Confidence 8999999999999999998732211 11111123577899999654444 788887 4333333322221100
Q ss_pred ccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecC---CCh
Q psy8850 227 HEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF---IEG 303 (397)
Q Consensus 227 ~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 303 (397)
.... ..+.....+...++....+.+.+..++++++++++.+.|++ ++++.+..+.+ +.++++.++. .+.
T Consensus 270 ---~~~~-~~s~~~q~~~~~~l~~~~~~l~~~~~~~~~~~~~l~~~L~~-~~~~~~~~p~g---~~~~~~~l~~~~~~~~ 341 (398)
T PRK08363 270 ---RIRL-CPNTPAQFAAIAGLTGPMDYLEEYMKKLKERRDYIYKRLNE-IPGISTTKPQG---AFYIFPRIEEGPWKDD 341 (398)
T ss_pred ---cccc-cCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhc-CCCCEecCCCe---EEEEEEEeccCCCCCH
Confidence 0011 23333344444555433446777888999999999999988 77766554432 3344445654 234
Q ss_pred HHHHHH-hC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHH
Q psy8850 304 ESLLMA-IK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKK 372 (397)
Q Consensus 304 ~~~~~~-l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 372 (397)
.++... +. ||.+.+|..|.. ...+++||++. .+++++++++++|++++.+
T Consensus 342 ~~~~~~~l~~~gV~v~~g~~f~~-----------------~~~~~iRis~~--~~~~~l~~~l~~l~~~~~~ 394 (398)
T PRK08363 342 KEFVLDVLHEAHVLFVHGSGFGE-----------------YGAGHFRLVFL--PPVEILEEAMDRFEEFMRE 394 (398)
T ss_pred HHHHHHHHHhCCEEEeCchhhCC-----------------CCCCeEEEEec--CCHHHHHHHHHHHHHHHHH
Confidence 555434 33 899999876532 11378999996 4789999999999988754
No 85
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.97 E-value=4.7e-29 Score=232.12 Aligned_cols=308 Identities=15% Similarity=0.115 Sum_probs=223.0
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCC
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGK 87 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~ 87 (397)
++|+.+++++.+.+.... . .|.. ....++++++++++++++++|++|+|+++|+.+++.++. ++||
T Consensus 37 ~~~~~~~~a~~~~~~~~~----~-~y~~-----~~~~~lr~aia~~~~~~~~~I~it~G~~~al~~~~~~l~----~~gd 102 (353)
T PRK05387 37 PPSPKVLEAIRAALGDDL----R-LYPD-----PNADALRQAIAAYYGLDPEQVFVGNGSDEVLAHAFLAFF----NHDR 102 (353)
T ss_pred CCCHHHHHHHHHHhhhhh----h-cCCC-----CcHHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhc----CCCC
Confidence 457889999988765311 0 1211 123689999999999999999999999999999999988 7999
Q ss_pred EEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhc-C
Q psy8850 88 HIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSK-G 166 (397)
Q Consensus 88 ~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~-g 166 (397)
+|++++|+|+.+....+.. |.+++.+|.++++.+|++++++ .++++++++|+||||.++|.+++.++++.+ +
T Consensus 103 ~vlv~~P~y~~~~~~~~~~---g~~~~~v~~~~~~~~d~~~l~~----~~~~v~~~~P~NPtG~~~~~~~~~~l~~~~~~ 175 (353)
T PRK05387 103 PLLFPDITYSFYPVYAGLY---GIPYEEIPLDDDFSIDVEDYLR----PNGGIIFPNPNAPTGIALPLAEIERILAANPD 175 (353)
T ss_pred EEEEeCCCHHHHHHHHHHc---CCEEEEeecCCCCCCCHHHHHh----cCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCC
Confidence 9999999998877666666 9999999998778899999874 457889999999999999999999998876 9
Q ss_pred cEEEEecccccCc-c-cccc-CcccccEEEeccccccCCCC--ceEEEEecCCCCccccccccCCccccccCCCCchhHH
Q psy8850 167 VIFHCDAAQAVGK-I-DINI-QNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQI 241 (397)
Q Consensus 167 i~livD~a~~~~~-~-~~~~-~~~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (397)
+++|+|++|.... . ...+ ...+.++++.|++|.+|.+| +|+++.+++..+.+...... +...+.+....
T Consensus 176 ~~livDe~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~~~~l~~~~~~------~~~~~~~~~~q 249 (353)
T PRK05387 176 SVVVIDEAYVDFGGESAIPLIDRYPNLLVVQTFSKSRSLAGLRVGFAIGHPELIEALNRVKNS------FNSYPLDRLAQ 249 (353)
T ss_pred cEEEEeCcccccCCcchHHHHhhCCCEEEEEehhHhhcchhhhceeeecCHHHHHHHHHhhcc------CCCCCcCHHHH
Confidence 9999999986211 1 1111 12245789999999665444 79998876655554433211 11223444455
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCChHHHHHHhC--CcEecccC
Q psy8850 242 VGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAIK--DIAVSSGS 319 (397)
Q Consensus 242 ~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~i~~~~g~ 319 (397)
.++.++++. .+.+++..+++.++++++.+.|++ + ++.+.. .. +.++++.+++.+..++.+.|. ||.+..
T Consensus 250 ~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~-~~---~~~~~~~~~~~~~~~~~~~l~~~gi~v~~-- 320 (353)
T PRK05387 250 AGAIAAIED-EAYFEETRAKVIATRERLVEELEA-L-GFEVLP-SK---ANFVFARHPSHDAAELAAKLRERGIIVRH-- 320 (353)
T ss_pred HHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHH-C-CCeECC-Cc---CcEEEEECCCCCHHHHHHHHHHCCEEEEE--
Confidence 555455542 234667788888999999999998 5 665432 22 345667766666777887776 887752
Q ss_pred ccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHH
Q psy8850 320 ACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVK 371 (397)
Q Consensus 320 ~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 371 (397)
+.. ....+++||+++ +.+++++++++|++++.
T Consensus 321 -~~~----------------~~~~~~iRis~~---~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 321 -FNK----------------PRIDQFLRITIG---TDEEMEALVDALKEILA 352 (353)
T ss_pred -CCC----------------CCCCCeEEEEeC---CHHHHHHHHHHHHHHhh
Confidence 111 011378999997 57999999999998754
No 86
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.97 E-value=6.2e-29 Score=234.96 Aligned_cols=328 Identities=15% Similarity=0.182 Sum_probs=228.0
Q ss_pred CCCCCC-CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHh-----CCCCCcEEEeCChhHHHHHHH
Q psy8850 2 DYSATT-PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLI-----YADPREIIWTSGATESNNLAI 75 (397)
Q Consensus 2 ~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~-----~~~~~~i~~~~g~t~a~~~~l 75 (397)
|.+.+. ++|+.+.+++.+...... .| .......++++.+++++ ++++++|++|+|+++|+.+++
T Consensus 36 ~~~~~~~~~~~~~~~a~~~~~~~~~------~Y----~~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~G~~~al~~~~ 105 (397)
T PRK07568 36 NIGQPDIKTPEVFFEAIKNYDEEVL------AY----SHSQGIPELREAFAKYYKKWGIDVEPDEILITNGGSEAILFAM 105 (397)
T ss_pred cCCCCCCCCCHHHHHHHHHHhcCCc------Cc----CCCCCCHHHHHHHHHHHHHhCCCCCcceEEEcCChHHHHHHHH
Confidence 444443 467888888776543221 11 11234577888888887 467789999999999999999
Q ss_pred HHhHhhhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccC-CCC-C-CCHHHHHHHhcCCceEEEEecccCccccc
Q psy8850 76 KGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPK-NNG-L-ITLSQLEEKICSDTILVSVMLVNNEIGVI 152 (397)
Q Consensus 76 ~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~-~~~-~-~d~~~l~~~i~~~~~~v~~~~~~~~tG~~ 152 (397)
.++. ++||+|++++|.|+.+....+.. |.+++.++.+ +++ . .+++++++++++++++|++++|+||||.+
T Consensus 106 ~~l~----~~gd~Vl~~~p~y~~~~~~~~~~---g~~~~~v~~~~~~g~~~~~~~~l~~~~~~~~~~v~i~~p~NPtG~~ 178 (397)
T PRK07568 106 MAIC----DPGDEILVPEPFYANYNGFATSA---GVKIVPVTTKIEEGFHLPSKEEIEKLITPKTKAILISNPGNPTGVV 178 (397)
T ss_pred HHhc----CCCCEEEEecCCCccHHHHHHHc---CCEEEEeecCcccCCCCCCHHHHHHhcCccceEEEEECCCCCCCcc
Confidence 8886 78999999999998876655555 9999999986 333 2 35799999999999999999999999999
Q ss_pred cc---HHHHHHHHHhcCcEEEEecccccCc----ccc---ccCc-ccccEEEeccccccCCCC--ceEEEEec-CCCCcc
Q psy8850 153 QP---ILEIGELCRSKGVIFHCDAAQAVGK----IDI---NIQN-YKVDLMSFSAHKIYGPKG--IGALYIRR-NPRTRI 218 (397)
Q Consensus 153 ~~---l~~i~~l~~~~gi~livD~a~~~~~----~~~---~~~~-~~~d~~~~s~~K~~g~~g--~g~~~~~~-~~~~~~ 218 (397)
++ +++|+++|+++|+++|+|++|+... ... ++.. .+..+++.|++|.+|.+| +|++++++ +....+
T Consensus 179 ~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~~~~~~~~~ 258 (397)
T PRK07568 179 YTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLISKNKELIAAA 258 (397)
T ss_pred CCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhccCCCcceEEEecCCHHHHHHH
Confidence 97 6788999999999999999987221 111 1111 134588899999655434 78887753 333332
Q ss_pred ccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEe
Q psy8850 219 EAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISF 298 (397)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (397)
...... .. ..+.....++..+++....++++..+.++++++.+.+.|++ ++++.+..+.+ +.++++.+
T Consensus 259 ~~~~~~-------~~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~p~g---~~~~~~~l 326 (397)
T PRK07568 259 MKLCQA-------RL-SPPTLEQIGAAALLDTPESYFDEVREEYKKRRDILYEELNK-IPGVVCEKPKG---AFYIIAKL 326 (397)
T ss_pred HHHhhc-------cC-CCCcHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHhc-CCCceecCCCc---ceEEEEec
Confidence 221110 01 23333444454566543456778888999999999999988 66765554432 33456777
Q ss_pred cCCChHHHHHHh--------CCcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHH
Q psy8850 299 NFIEGESLLMAI--------KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKV 370 (397)
Q Consensus 299 ~~~~~~~~~~~l--------~~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~ 370 (397)
+..+..++...+ .||.+.+|..|.. .....+++|||+++. +.+++++++++|.+++
T Consensus 327 ~~~~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~--------------~~~~~~~~iRls~~~--~~~~~~~~~~~l~~~l 390 (397)
T PRK07568 327 PVDDAEDFAKWLLTDFNYNGETVMVAPASGFYA--------------TPGLGKNEIRIAYVL--NEEDLKRAMEILKEAL 390 (397)
T ss_pred CCCCHHHHHHHHHhhcccccceEEEeCchHhcC--------------CCCCCCCeEEEEEeC--CHHHHHHHHHHHHHHH
Confidence 654566776666 3789998865532 011123789999974 6899999999999988
Q ss_pred HHHH
Q psy8850 371 KKLR 374 (397)
Q Consensus 371 ~~~~ 374 (397)
+++.
T Consensus 391 ~~~~ 394 (397)
T PRK07568 391 EKYN 394 (397)
T ss_pred HHhh
Confidence 7654
No 87
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.97 E-value=1.2e-28 Score=231.88 Aligned_cols=318 Identities=13% Similarity=0.124 Sum_probs=222.0
Q ss_pred CCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHh----CC---CCCcEEEeCChhHHHHHHHHHhHhh
Q psy8850 9 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLI----YA---DPREIIWTSGATESNNLAIKGAAHF 81 (397)
Q Consensus 9 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~~---~~~~i~~~~g~t~a~~~~l~~l~~~ 81 (397)
+++.+.+++.+.+.... . .|.. .....++++++++++ +. ++++|++|+|+++|+.+++.++.
T Consensus 44 ~~~~~~~~~~~~~~~~~----~-~Y~~----~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~-- 112 (391)
T PRK07309 44 TPDHVKEAAKRAIDANQ----S-HYTG----MAGLLELRQAAADFVKEKYNLDYAPENEILVTIGATEALSASLTAIL-- 112 (391)
T ss_pred CCHHHHHHHHHHHhcCC----C-CCCC----CCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhc--
Confidence 46778888887765311 1 1111 122455666666655 43 24679999999999999999887
Q ss_pred hccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCC-CCCCCHHHHHHHhcC---CceEEEEecccCccccccc---
Q psy8850 82 YKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN-NGLITLSQLEEKICS---DTILVSVMLVNNEIGVIQP--- 154 (397)
Q Consensus 82 ~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~-~~~~d~~~l~~~i~~---~~~~v~~~~~~~~tG~~~~--- 154 (397)
++||+|++.+|.|+.+...++.. |.+++.++.+. ++.+|++++++++++ +++++++++|+||||.+++
T Consensus 113 --~~gd~vl~~~p~y~~~~~~~~~~---g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~NPtG~~~s~~~ 187 (391)
T PRK07309 113 --EPGDKVLLPAPAYPGYEPIVNLV---GAEIVEIDTTENDFVLTPEMLEKAILEQGDKLKAVILNYPANPTGVTYSREQ 187 (391)
T ss_pred --CCCCEEEEeCCCCcchHHHHHHc---CCEEEEEecCCcCCcCCHHHHHHHhhccCCCeEEEEEECCCCCCCcCcCHHH
Confidence 78999999999999998777766 99999999865 346899999999864 6899999999999999988
Q ss_pred HHHHHHHHHhcCcEEEEecccccCcc----ccccCc--ccccEEEeccccccCCCC--ceEEEEecCCCCccccccccCC
Q psy8850 155 ILEIGELCRSKGVIFHCDAAQAVGKI----DINIQN--YKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGG 226 (397)
Q Consensus 155 l~~i~~l~~~~gi~livD~a~~~~~~----~~~~~~--~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~ 226 (397)
+++|+++|++||+++|+|++|+.... ..++.. .+..+++.|++|.+|.+| +|+++++++....+.....
T Consensus 188 ~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRvG~~v~~~~~~~~~~~~~~--- 264 (391)
T PRK07309 188 IKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYLPDQTILINGLSKSHAMTGWRIGLIFAPAEFTAQLIKSHQ--- 264 (391)
T ss_pred HHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhccCCEEEEecChhhccCccceeEEEEeCHHHHHHHHHHHh---
Confidence 67888999999999999999873221 112211 134588999999776445 7899988776655543211
Q ss_pred ccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCC---Ch
Q psy8850 227 HEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFI---EG 303 (397)
Q Consensus 227 ~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 303 (397)
+...+++.....++..+++.........++++.++++++.+.|++ . ++.+..+.+ +..+++.++.. ++
T Consensus 265 ----~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~-~-~~~~~~p~g---g~~~~~~l~~~~~~~~ 335 (391)
T PRK07309 265 ----YLVTAATTMAQFAAVEALTNGKDDALPMKKEYIKRRDYIIEKMTD-L-GFKIIKPDG---AFYIFAKIPAGYNQDS 335 (391)
T ss_pred ----hcccCCChHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHH-C-CCeecCCCe---eEEEEEECCCCCCCCH
Confidence 111123333444444455432222345667788888999999988 4 666554432 33455566532 34
Q ss_pred HHHHHHh-C--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHH
Q psy8850 304 ESLLMAI-K--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 304 ~~~~~~l-~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 373 (397)
.++.+.+ . ||.+.+|..|.. ..+++|||+++. +.+++++++++|+++++++
T Consensus 336 ~~~~~~l~~~~gv~v~pg~~f~~-----------------~~~~~iRi~~~~--~~~~l~~~i~~l~~~~~~~ 389 (391)
T PRK07309 336 FKFLQDFARKKAVAFIPGAAFGP-----------------YGEGYVRLSYAA--SMETIKEAMKRLKEYMEEH 389 (391)
T ss_pred HHHHHHHHHhCCEEEeCchhhCC-----------------CCCCEEEEEecC--CHHHHHHHHHHHHHHHHhh
Confidence 5666553 2 899999976543 123899999985 6899999999999988665
No 88
>PRK08068 transaminase; Reviewed
Probab=99.97 E-value=4e-29 Score=235.18 Aligned_cols=315 Identities=12% Similarity=0.086 Sum_probs=220.5
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHh----C--CCCC-cEEEeCChhHHHHHHHHHhHh
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLI----Y--ADPR-EIIWTSGATESNNLAIKGAAH 80 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~--~~~~-~i~~~~g~t~a~~~~l~~l~~ 80 (397)
++++.+.+++.+.+.... .. .| .......++++++++++ | ++++ +|++|+|+++++..++.++.
T Consensus 45 ~~~~~~~~~~~~~~~~~~---~~-~Y----~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~l~~~~~~~~- 115 (389)
T PRK08068 45 PTPEHIVEALQEAAENPA---NH-KY----SPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKAGLVELPQCLM- 115 (389)
T ss_pred CCCHHHHHHHHHHHhCCC---CC-CC----CCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHhC-
Confidence 345778888888765311 00 12 11223566777777765 5 5666 79999999999999988887
Q ss_pred hhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCC--CCCCCHHHHHHHhcCCceEEEEecccCcccccccH---
Q psy8850 81 FYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN--NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPI--- 155 (397)
Q Consensus 81 ~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l--- 155 (397)
++||.|++++|+|+.+...+... |.+++.+|.+. +..+|++++++.+.+++++|++++|+||||.+++.
T Consensus 116 ---~~gd~vlv~~P~y~~~~~~~~~~---g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPTG~~~s~~~~ 189 (389)
T PRK08068 116 ---NPGDTILVPDPGYPDYLSGVALA---RAQFETMPLIAENNFLPDYTKIPEEVAEKAKLMYLNYPNNPTGAVATKAFF 189 (389)
T ss_pred ---CCCCEEEEcCCCCcchHHHHHhc---CCEEEEeecccccCCCCCHHHHHHhccccceEEEEECCCCCCCCcCCHHHH
Confidence 79999999999999998887776 99999999974 34679999999998889999999999999999995
Q ss_pred HHHHHHHHhcCcEEEEecccccCc----ccccc---C-cccccEEEeccccccCCCC--ceEEEEecCCCCccccccccC
Q psy8850 156 LEIGELCRSKGVIFHCDAAQAVGK----IDINI---Q-NYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGG 225 (397)
Q Consensus 156 ~~i~~l~~~~gi~livD~a~~~~~----~~~~~---~-~~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~ 225 (397)
++|+++|++||++||+|++|+... .+... . ..+..+++.|++|.+|.+| +|+++.+++..+.+......
T Consensus 190 ~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~l~~~l~~~~~~- 268 (389)
T PRK08068 190 EETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAVGNESVIEAINLLQDH- 268 (389)
T ss_pred HHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCccceeEeEecCHHHHHHHHHHHhh-
Confidence 578889999999999999986211 11111 1 1134588899999776556 79988877665555433211
Q ss_pred CccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecC-CChH
Q psy8850 226 GHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF-IEGE 304 (397)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 304 (397)
...+.++..+.++. .++....+.+++.++++.++++.+.+.|++ + ++.+..+.+ +.++++.+++ .++.
T Consensus 269 -----~~~~~~~~~q~~~~-~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~-~-g~~~~~~~g---~~~~~v~~~~~~~~~ 337 (389)
T PRK08068 269 -----LFVSLFGAIQDAAI-EALLSDQSCVAELVARYESRRNAFISACRE-I-GWEVDAPKG---SFFAWMPVPKGYTSE 337 (389)
T ss_pred -----ccCCCChHHHHHHH-HHHhCcHHHHHHHHHHHHHHHHHHHHHHHH-C-CCcccCCCe---eEEEEEECCCCCCHH
Confidence 11223332333333 333322345778889999999999999988 4 555443322 3345677763 4667
Q ss_pred HHHHHhC---CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHH
Q psy8850 305 SLLMAIK---DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 368 (397)
Q Consensus 305 ~~~~~l~---~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~ 368 (397)
++.+.+. ||.+.+|..|.. ...+++||+++. ++++++..+++|.+
T Consensus 338 ~~~~~l~~~~gi~v~pg~~f~~-----------------~~~~~iRi~~~~--~~~~l~~al~~l~~ 385 (389)
T PRK08068 338 QFADLLLEKAHVAVAPGNGFGE-----------------HGEGYVRVGLLT--DEERLREAVERIGK 385 (389)
T ss_pred HHHHHHHHhCCEEEecchHhCc-----------------cCCCeEEEEEcC--CHHHHHHHHHHHHH
Confidence 7877763 899999865432 113789999974 56777777776654
No 89
>PRK08912 hypothetical protein; Provisional
Probab=99.97 E-value=1.2e-28 Score=231.98 Aligned_cols=319 Identities=17% Similarity=0.143 Sum_probs=224.1
Q ss_pred CCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHh----C--CCCC-cEEEeCChhHHHHHHHHHhHhh
Q psy8850 9 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLI----Y--ADPR-EIIWTSGATESNNLAIKGAAHF 81 (397)
Q Consensus 9 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~--~~~~-~i~~~~g~t~a~~~~l~~l~~~ 81 (397)
.|+.+.+++.+.+... .. .|.. .....++|+++++++ | ++++ +|++|+|+++|+.+++.++.
T Consensus 40 ~p~~~~~~~~~~~~~~----~~-~Y~~----~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~-- 108 (387)
T PRK08912 40 GPEDVRRAAADALLDG----SN-QYPP----MMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEALAAALLALV-- 108 (387)
T ss_pred CCHHHHHHHHHHHhcC----CC-CCCC----CCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHHHHHHHHhc--
Confidence 4667777777765431 11 2222 123345555555554 5 4566 89999999999999999887
Q ss_pred hccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCC-CCCCCHHHHHHHhcCCceEEEEecccCccccccc---HHH
Q psy8850 82 YKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN-NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---ILE 157 (397)
Q Consensus 82 ~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~-~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~---l~~ 157 (397)
++||+|+++.|+|+.+...+... |.+++.++.+. ++.+|++++++.+.++++++++++++||||.++| +++
T Consensus 109 --~~gd~Vlv~~p~y~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~ 183 (387)
T PRK08912 109 --EPGDEVVLFQPLYDAYLPLIRRA---GGVPRLVRLEPPHWRLPRAALAAAFSPRTKAVLLNNPLNPAGKVFPREELAL 183 (387)
T ss_pred --CCCCEEEEeCCCchhhHHHHHHc---CCEEEEEecCcccCcCCHHHHHHHhCccceEEEEeCCCCCcCcccCHHHHHH
Confidence 78999999999999988877666 99999999864 5679999999999989999999999999999998 566
Q ss_pred HHHHHHhcCcEEEEecccccCcc------cc-ccCc-ccccEEEeccccccCCCC--ceEEEEecCCCCccccccccCCc
Q psy8850 158 IGELCRSKGVIFHCDAAQAVGKI------DI-NIQN-YKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGH 227 (397)
Q Consensus 158 i~~l~~~~gi~livD~a~~~~~~------~~-~~~~-~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~ 227 (397)
|.++|++||+++|+|++|+.... ++ .+.. .+.++++.|++|.+|.+| +|+++++++....+......
T Consensus 184 i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~~~~l~~~~~~--- 260 (387)
T PRK08912 184 LAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCAAPPLLRVLAKAHQF--- 260 (387)
T ss_pred HHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCceeEEEecCHHHHHHHHHHHhh---
Confidence 89999999999999999862211 11 1111 246799999999777556 79999887655554332110
Q ss_pred cccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecC----CCh
Q psy8850 228 EYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF----IEG 303 (397)
Q Consensus 228 ~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 303 (397)
...+.++ ....++..++....+.+++..++++++++++.+.|++ . ++.+..+.+ +.++++.++. .+.
T Consensus 261 ---~~~~~~~-~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~g---~~~l~~~l~~~~~~~~~ 331 (387)
T PRK08912 261 ---LTFTTPP-NLQAAVAYGLGKPDDYFEGMRADLARSRDRLAAGLRR-I-GFPVLPSQG---TYFLTVDLAPLGLAEDD 331 (387)
T ss_pred ---ccccCCh-HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHh-C-CCcccCCCc---ceEEEecccccCCCCCH
Confidence 0011222 2233333444322345677888899999999999998 4 665554332 3456667653 356
Q ss_pred HHHHHHh-C--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHH
Q psy8850 304 ESLLMAI-K--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKK 372 (397)
Q Consensus 304 ~~~~~~l-~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 372 (397)
.++...+ . ||.+.+|..|... ....+++||+++. +++++++.+++|.+++++
T Consensus 332 ~~~~~~l~~~~gV~v~pg~~f~~~---------------~~~~~~iRl~~~~--~~~~l~~~l~rl~~~l~~ 386 (387)
T PRK08912 332 VAFCRRLVEEAGVAAIPVSAFYEE---------------DPVTSVVRFCFAK--RDATLDEAVERLAAARRR 386 (387)
T ss_pred HHHHHHHHhcCCEEEecchhhCCC---------------CCCCCEEEEEEeC--CHHHHHHHHHHHHHHHhc
Confidence 6777765 2 8999998765431 0123799999996 589999999999887653
No 90
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.97 E-value=9.5e-29 Score=233.42 Aligned_cols=321 Identities=12% Similarity=0.035 Sum_probs=225.6
Q ss_pred CCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCC--CCCcEEEeCChhHHHHHHHHHhHhhhccCC
Q psy8850 9 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYA--DPREIIWTSGATESNNLAIKGAAHFYKKRG 86 (397)
Q Consensus 9 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~--~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g 86 (397)
+++.+.+++.+.+.... . .|.......+..+.+.+.+++.+|. .+++|++|+|+++|+..++.++. ++|
T Consensus 47 ~~~~~~~~~~~~~~~~~----~-~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~~~----~~g 117 (402)
T PRK06107 47 TPDHIKQAAVAAIERGE----T-KYTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFLALMATL----EAG 117 (402)
T ss_pred CCHHHHHHHHHHHHcCC----C-CCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhc----CCC
Confidence 46788888888775311 1 2222222334556666666666676 56789999999999999998876 799
Q ss_pred CEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCC--CCCCCHHHHHHHhcCCceEEEEecccCcccccccH---HHHHHH
Q psy8850 87 KHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN--NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPI---LEIGEL 161 (397)
Q Consensus 87 ~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l---~~i~~l 161 (397)
|+|++++|+|+.+...+... +..+..++++. ++.+|++++++++.++++++++++|+||||.++|. ++|+++
T Consensus 118 d~vl~~~p~y~~y~~~~~~~---~~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~ 194 (402)
T PRK06107 118 DEVIIPAPYWVSYPDMVLAN---DGTPVIVACPEEQGFKLTPEALEAAITPRTRWLILNAPSNPTGAVYSRAELRALADV 194 (402)
T ss_pred CEEEEecCCCcCHHHHHHHc---CCEEEEecCCcccCCCCCHHHHHhhcCcCceEEEEECCCCCCCcCcCHHHHHHHHHH
Confidence 99999999999887766555 77777888752 35689999999998899999999999999999985 667888
Q ss_pred HHhc-CcEEEEecccccC---c-cccccCc-----ccccEEEeccccccCCCC--ceEEEEecCCCCccccccccCCccc
Q psy8850 162 CRSK-GVIFHCDAAQAVG---K-IDINIQN-----YKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEY 229 (397)
Q Consensus 162 ~~~~-gi~livD~a~~~~---~-~~~~~~~-----~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~ 229 (397)
|+++ |+++|+|++|+.. . ....+.. .+..+++.|++|.+|.+| +|+++++++....+......
T Consensus 195 a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~~~~~~~~~~~~~~~~----- 269 (402)
T PRK06107 195 LLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAGPADLIAAINKLQSQ----- 269 (402)
T ss_pred HHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccceeeeecCHHHHHHHHHHHHh-----
Confidence 9998 9999999998621 1 1111111 134678899999666555 69998887665555443211
Q ss_pred cccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecC---------
Q psy8850 230 GLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF--------- 300 (397)
Q Consensus 230 ~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 300 (397)
....++.....++..+++.....+++..+.+.++++.+.+.|++ ++++.+..+.+ +..+++.++.
T Consensus 270 --~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~-~~g~~~~~p~g---g~~~~~~~~~~~~~~~~~~ 343 (402)
T PRK06107 270 --SSSCPSSISQAAAAAALNGDQSFVTESVAVYKQRRDYALALLNA-IPGLSCLVPDG---AFYLYVNCAGLIGKTTPEG 343 (402)
T ss_pred --cccCCChHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhc-CCCCcccCCCc---ceEEeeecccccccccccc
Confidence 11233444444444555422335677788899999999999988 66766654433 3344555421
Q ss_pred ---CChHHHHHHh-C--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHH
Q psy8850 301 ---IEGESLLMAI-K--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 301 ---~~~~~~~~~l-~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 373 (397)
.+..++...+ . ||.+.+|..|.. .+++||+++. +.+++++++++|.+.++++
T Consensus 344 ~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~-------------------~~~iRis~~~--~~e~l~~~l~~l~~~l~~~ 401 (402)
T PRK06107 344 KVLETDQDVVLYLLDSAGVAVVQGTAYGL-------------------SPYFRLSIAT--SLETLEEACARIERAVAAL 401 (402)
T ss_pred cCCCCHHHHHHHHHHhCCEEEeCccccCC-------------------CCeEEEEeCC--CHHHHHHHHHHHHHHHHhc
Confidence 1345666554 2 899999975532 2789999995 7999999999999988765
No 91
>PRK07337 aminotransferase; Validated
Probab=99.97 E-value=5.6e-29 Score=234.24 Aligned_cols=318 Identities=14% Similarity=0.071 Sum_probs=221.6
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHh----C--CCCCcEEEeCChhHHHHHHHHHhHhh
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLI----Y--ADPREIIWTSGATESNNLAIKGAAHF 81 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~--~~~~~i~~~~g~t~a~~~~l~~l~~~ 81 (397)
++++.+.+++.+.+.... . .|.. .....++++.+++++ | +++++|++|+|+++|+.+++.++.
T Consensus 43 ~~~~~~~~~~~~~~~~~~----~-~Y~~----~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~-- 111 (388)
T PRK07337 43 TAPEPVVEAAARALRRGV----T-QYTS----ALGLAPLREAIAAWYARRFGLDVAPERIVVTAGASAALLLACLALV-- 111 (388)
T ss_pred CCCHHHHHHHHHHHhcCC----C-CCCC----CCCCHHHHHHHHHHHHHHhCCCCChHhEEEecCcHHHHHHHHHHhc--
Confidence 457888888888775311 1 1211 223556666666665 4 477889999999999999999887
Q ss_pred hccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCC--CCCCCHHHHHHHhcCCceEEEEecccCccccccc---HH
Q psy8850 82 YKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN--NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---IL 156 (397)
Q Consensus 82 ~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~---l~ 156 (397)
++||+|++++|+|+++...+... |.+++.+|.+. ++.+|++++++.+++++++|++++|+||||.+++ ++
T Consensus 112 --~~gd~Vlv~~p~y~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~ 186 (388)
T PRK07337 112 --ERGDEVLMPDPSYPCNRHFVAAA---EGRPVLVPSGPAERFQLTAADVEAAWGERTRGVLLASPSNPTGTSIAPDELR 186 (388)
T ss_pred --CCCCEEEEeCCCchhhHHHHHHc---CCEEEEeecCCccCCcCCHHHHHhhcCccceEEEEECCCCCCCcCcCHHHHH
Confidence 79999999999999998777666 88999999874 4579999999999999999999999999999998 56
Q ss_pred HHHHHHHhcCcEEEEecccccCcc---ccccCccccc-EEEeccccccCCCC--ceEEEEecCCCCccccccccCCcccc
Q psy8850 157 EIGELCRSKGVIFHCDAAQAVGKI---DINIQNYKVD-LMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYG 230 (397)
Q Consensus 157 ~i~~l~~~~gi~livD~a~~~~~~---~~~~~~~~~d-~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~ 230 (397)
+|+++|+++|+++|+|++|..... +.....++.+ +++.|++|.+|.+| +|+++++++....+......
T Consensus 187 ~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~~~~~~l~~~l~~~~~~------ 260 (388)
T PRK07337 187 RIVEAVRARGGFTIVDEIYQGLSYDAAPVSALSLGDDVITINSFSKYFNMTGWRLGWLVVPEALVGTFEKLAQN------ 260 (388)
T ss_pred HHHHHHHHCCCEEEEeccccccccCCCCcChhhccCCEEEEEechhhcCCchhheeeeecCHHHHHHHHHHHHH------
Confidence 788889999999999999873211 1122222233 56789999666555 79999887655554433211
Q ss_pred ccCCCCchhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecC------CCh
Q psy8850 231 LRSGTLATHQIVGMGEAFRL-ARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF------IEG 303 (397)
Q Consensus 231 ~~~~~~~~~~~~~l~~al~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 303 (397)
... ..+.....++..+++. ..+.+.+.++.++++++++.+.|++ + ++.+...+. .+.++++.++. .++
T Consensus 261 ~~~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~-~-~~~~~~~p~--~g~f~~~~~~~~~~~~~~~~ 335 (388)
T PRK07337 261 LFI-CASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALES-L-GFKVPVMPD--GAFYVYADCRGVAHPAAGDS 335 (388)
T ss_pred hcc-CCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHh-c-CCccccCCC--eeEEEEEecccccCCCCCCH
Confidence 111 2233333333344431 1234566788888999999999988 4 443321222 14566777763 356
Q ss_pred HHHHHHh-C--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHH
Q psy8850 304 ESLLMAI-K--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKV 370 (397)
Q Consensus 304 ~~~~~~l-~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~ 370 (397)
.++...+ . ||.+.+|..|... ...+++||+++. +.++++..+++|.+++
T Consensus 336 ~~~~~~ll~~~gv~v~pg~~f~~~----------------~~~~~~Ri~~~~--~~~~l~~~l~rl~~~l 387 (388)
T PRK07337 336 AALTQAMLHDAGVVLVPGRDFGPH----------------APRDYIRLSYAT--SMSRLEEAVARLGKLF 387 (388)
T ss_pred HHHHHHHHHhCCEEEeCchhhCCC----------------CCCCEEEEEecC--CHHHHHHHHHHHHHHh
Confidence 6776553 2 8999998765420 123799999995 6889999888887654
No 92
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.97 E-value=1.1e-28 Score=230.84 Aligned_cols=306 Identities=16% Similarity=0.119 Sum_probs=223.8
Q ss_pred CCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCE
Q psy8850 9 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKH 88 (397)
Q Consensus 9 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~ 88 (397)
+++.+++++.+.......++.. ...++++.+++++++++++|++|+|+++++..++.++. ++||+
T Consensus 46 ~~~~~~~a~~~~~~~~~~y~~~-----------~~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~l~----~~gd~ 110 (367)
T PRK02731 46 PSPKAIEAIRAAADELHRYPDG-----------SGFELKAALAEKFGVDPERIILGNGSDEILELLARAYL----GPGDE 110 (367)
T ss_pred CCHHHHHHHHHHHHhhcCCCCC-----------cHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHhc----CCCCE
Confidence 5788999988877543222221 12579999999999988899999999999999988886 78999
Q ss_pred EEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhc--C
Q psy8850 89 IITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSK--G 166 (397)
Q Consensus 89 vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~--g 166 (397)
|++++++|..+....... |.+++.+|.+ ++.+|++++++++++++++|++++++||||.++|.+++.++++.+ |
T Consensus 111 vl~~~p~y~~~~~~~~~~---g~~~~~~~~~-~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~ 186 (367)
T PRK02731 111 VIYSEHGFAVYPIAAQAV---GAKPVEVPAK-DYGHDLDAMLAAVTPRTRLVFIANPNNPTGTYLPAEEVERFLAGVPPD 186 (367)
T ss_pred EEEecCCHHHHHHHHHHc---CCeEEEeccc-CCCCCHHHHHHHhCCCCcEEEEeCCCCCCCcCCCHHHHHHHHHhCCCC
Confidence 999999998776655544 9999999884 466899999999998999999999999999999999999988874 9
Q ss_pred cEEEEecccccCcc------ccccC-cccccEEEeccccccCCCC--ceEEEEecCCCCccccccccCCccccccCCCCc
Q psy8850 167 VIFHCDAAQAVGKI------DINIQ-NYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLA 237 (397)
Q Consensus 167 i~livD~a~~~~~~------~~~~~-~~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (397)
+++|+|++|..... .++.. .....+++.|++|.+|.+| +|+++++++..+.+...... + ..+
T Consensus 187 ~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~~~~~~l~~~~~~------~---~~~ 257 (367)
T PRK02731 187 VLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAPPEIIDALNRVRQP------F---NVN 257 (367)
T ss_pred cEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeCCHHHHHHHHHccCC------C---CCC
Confidence 99999999863221 11111 1134577889999666445 69999887655554433211 1 122
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEec-CCChHHHHHHhC--CcE
Q psy8850 238 THQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN-FIEGESLLMAIK--DIA 314 (397)
Q Consensus 238 ~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~--~i~ 314 (397)
.....+..++++. ...+++..+.++++++++.+.|++ . ++.+.. +. +.++++.++ ..++.++.+.|. ||.
T Consensus 258 ~~~~~~a~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~-~~---g~~~~i~~~~~~~~~~~~~~L~~~gI~ 330 (367)
T PRK02731 258 SLALAAAVAALDD-DAFVEKSRALNAEGMAWLTEFLAE-L-GLEYIP-SV---GNFILVDFDDGKDAAEAYQALLKRGVI 330 (367)
T ss_pred HHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHH-C-CCccCC-CC---ceEEEEECCCCCCHHHHHHHHHHCCEE
Confidence 3333333344432 234677788888999999999998 4 655542 22 456677774 346677877775 899
Q ss_pred ecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHH
Q psy8850 315 VSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVK 371 (397)
Q Consensus 315 ~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 371 (397)
+.++..+.. .++||++++ +.+++++++++|+++++
T Consensus 331 v~~~~~~~~-------------------~~~iRis~~---~~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 331 VRPVAGYGL-------------------PNALRITIG---TEEENRRFLAALKEFLA 365 (367)
T ss_pred EEeCCCCCC-------------------CCeEEEecC---CHHHHHHHHHHHHHHHh
Confidence 988743321 278999996 68999999999998764
No 93
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.97 E-value=6.8e-29 Score=231.72 Aligned_cols=306 Identities=16% Similarity=0.161 Sum_probs=218.5
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEE-eCChhHHHHHHHHHhHhhhccCC
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIW-TSGATESNNLAIKGAAHFYKKRG 86 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~-~~g~t~a~~~~l~~l~~~~~~~g 86 (397)
.+++.+++++.+.+.....++.. ...++++.++++++++++++++ ++|+++++..++.++. ++|
T Consensus 47 ~~~~~~~~~~~~~~~~~~~y~~~-----------~~~~lr~~ia~~~~~~~~~i~~~~~Ga~~~i~~~~~~~~----~~g 111 (361)
T PRK00950 47 GPSPKAVEAIEKELSKIHRYPEP-----------DAPELREALSKYTGVPVENIIVGGDGMDEVIDTLMRTFI----DPG 111 (361)
T ss_pred CCCHHHHHHHHHHHHhhcCCCCC-----------CHHHHHHHHHHHhCCCHHHEEEeCCCHHHHHHHHHHHhc----CCC
Confidence 46788898888876653222211 1378999999999998889999 6788888999888876 789
Q ss_pred CEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcC
Q psy8850 87 KHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKG 166 (397)
Q Consensus 87 ~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~g 166 (397)
++|++++|.|+.+...++.. |.+++.++.+.++.+|++++++.++++++++++++++||||.++|.+++.++|+++|
T Consensus 112 d~vlv~~p~y~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~ 188 (361)
T PRK00950 112 DEVIIPTPTFSYYEISAKAH---GAKPVYAKREEDFSLDVDSVLNAITEKTKVIFLCTPNNPTGNLIPEEDIRKILESTD 188 (361)
T ss_pred CEEEEcCCChHHHHHHHHHc---CCEEEEeecCCCCCcCHHHHHHHhccCCCEEEEeCCCCCCCCCcCHHHHHHHHHHCC
Confidence 99999999988877665555 999999997777789999999999888999999999999999999999999999999
Q ss_pred cEEEEecccccCcc-c-cc-cCcccccEEEeccccccCCCC--ceEEEEecCCCCccccccccCCccccccCCCCchhHH
Q psy8850 167 VIFHCDAAQAVGKI-D-IN-IQNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQI 241 (397)
Q Consensus 167 i~livD~a~~~~~~-~-~~-~~~~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (397)
+++|+|++|..... . .. ....+..+++.|++|.+|.+| +|+++++++....+...... ...+....
T Consensus 189 ~~li~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~---------~~~~~~~~ 259 (361)
T PRK00950 189 ALVFVDEAYVEFAEYDYTPLALEYDNLIIGRTFSKVFGLAGLRIGYGFVPEWLIDYYMRAKTP---------FSLTRLSQ 259 (361)
T ss_pred cEEEEECchhhhCccchHHHHHhcCCEEEEEeehHhhcCchhhcchhcCCHHHHHHHHHhcCC---------CCCCHHHH
Confidence 99999999973221 0 01 112234577889999777555 78888876554444332211 11223333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCChHHHHHHhC--CcEecccC
Q psy8850 242 VGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAIK--DIAVSSGS 319 (397)
Q Consensus 242 ~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~i~~~~g~ 319 (397)
.+...+++. .+.+++..++++++++++.+.|. +.+.. +. ..++++.++..+..++.+.|. ||.+.+|.
T Consensus 260 ~~a~~~l~~-~~~~~~~~~~~~~~r~~l~~~l~-----~~~~~-~~---~~~i~~~~~~~~~~~~~~~l~~~gv~v~~~~ 329 (361)
T PRK00950 260 AAAIAALSD-KEYIEKSIEHGIKSREYLYNELP-----FKVYP-SE---ANFVLVDVTPMTAKEFCEELLKRGVIVRDCT 329 (361)
T ss_pred HHHHHHhcC-HHHHHHHHHHHHHHHHHHHhhcC-----eeECC-Cc---ceEEEEECCCCCHHHHHHHHHHCCEEEeeCC
Confidence 333344432 22355566666666666666553 33332 22 345667666567788887776 89998875
Q ss_pred ccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHH
Q psy8850 320 ACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKV 370 (397)
Q Consensus 320 ~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~ 370 (397)
.+.. ..+++|||+++ +.+++++++++|++++
T Consensus 330 ~f~~-----------------~~~~~lRis~~---~~~~~~~l~~~L~~il 360 (361)
T PRK00950 330 SFRG-----------------LGDYYIRVSIG---TFEENERFLEILKEIV 360 (361)
T ss_pred ccCC-----------------CCCCeEEEECC---CHHHHHHHHHHHHHHh
Confidence 4321 12378999997 6789999999998864
No 94
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.97 E-value=1.2e-28 Score=228.65 Aligned_cols=312 Identities=15% Similarity=0.102 Sum_probs=218.9
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHh----C--CCCC-cEEEeCChhHHHHHHHHHhHh
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLI----Y--ADPR-EIIWTSGATESNNLAIKGAAH 80 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~--~~~~-~i~~~~g~t~a~~~~l~~l~~ 80 (397)
++++.+.+++.+...... .|.. .....++++++++++ | ++++ +|++|+|+++|+..++.+++
T Consensus 13 ~~~~~~~~~~~~~~~~~~------~Y~~----~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~~~~~- 81 (350)
T TIGR03537 13 PTPPFIRKALIDAVPEVS------QYPS----ALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLVFI- 81 (350)
T ss_pred CCCHHHHHHHHHHHhccC------CCCC----CCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHHc-
Confidence 347788888887654321 1211 123345555555554 6 4566 89999999999999999887
Q ss_pred hhccCC---CEEEEcCCCChhhHHHHHHHhhCCcEEEEeccC-CC-CCCCHHHHHHHhcCCceEEEEecccCccccccc-
Q psy8850 81 FYKKRG---KHIITVQTEHKSVLDSIRKLENDGFRVTYLKPK-NN-GLITLSQLEEKICSDTILVSVMLVNNEIGVIQP- 154 (397)
Q Consensus 81 ~~~~~g---~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~-~~-~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~- 154 (397)
++| |+|+++.|+|+.+...+..+ |.+++.++.+ ++ ..+|++++++++.++++++++++++||||.++|
T Consensus 82 ---~~g~~~d~Vl~~~p~y~~~~~~~~~~---g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~ 155 (350)
T TIGR03537 82 ---DPEEDRRRVIFGTPGYPVYERGALFA---GGEPTAVKLKKEDGFLLRLEKVEKSILEETKIVWINYPHNPTGATAPR 155 (350)
T ss_pred ---CCCCCCceEEEcCCCCcchHHHHHhc---CCEEEEcccCcccCCccCHHHHHHhhhhccEEEEEeCCCCCcCcccCH
Confidence 565 69999999999999988877 9999999986 33 458999999999989999999999999999999
Q ss_pred --HHHHHHHHHhcCcEEEEecccccC---ccccccCc--ccccEEEeccccccCCCC--ceEEEEecCCCCccccccccC
Q psy8850 155 --ILEIGELCRSKGVIFHCDAAQAVG---KIDINIQN--YKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGG 225 (397)
Q Consensus 155 --l~~i~~l~~~~gi~livD~a~~~~---~~~~~~~~--~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~ 225 (397)
+++|+++|++||+++|+|++|+.. ..+..+.. .+..+++.|++|.+|.+| +|+++.+++....+......
T Consensus 156 ~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~- 234 (350)
T TIGR03537 156 SYLKETIAMCREHGIILCSDECYTEIYFGEPPHSALEVGIENVLAFHSLSKRSGMTGYRSGFVAGDEKLISFLRKLRAN- 234 (350)
T ss_pred HHHHHHHHHHHHcCcEEEEeccccccccCCCCCchhhcCcCCEEEEeecccccCCccccceeeecCHHHHHHHHHHHHh-
Confidence 788899999999999999998732 21211221 234588889999766555 78888766555544433211
Q ss_pred CccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecC-CChH
Q psy8850 226 GHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF-IEGE 304 (397)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 304 (397)
+..+.++. ...++.+++.. .+.+.+.++++.++++.+.+.|++ . ++.+..+.+ +.++++.++. .+..
T Consensus 235 -----~~~~~~~~-~q~~~~~~l~~-~~~~~~~r~~l~~~~~~~~~~l~~-~-g~~~~~~~g---~~~~~~~~~~~~~~~ 302 (350)
T TIGR03537 235 -----FGVASPDF-VQAAAKAAWSD-DNHVLERRKIFKRKRDLFIEFFNK-V-GLEYLYPDA---TFYLWVKVPSGIDAK 302 (350)
T ss_pred -----hccCCCHH-HHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHHHHH-C-CCcccCCCe---EEEEEEECCCCCCHH
Confidence 11122222 22222233331 234667788889999999999988 4 555444322 3345677764 3567
Q ss_pred HHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHH
Q psy8850 305 SLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 368 (397)
Q Consensus 305 ~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~ 368 (397)
++.+.|. ||.+.+|..|... ..+++||++. .+++++++++++|++
T Consensus 303 ~l~~~L~~~gv~v~~g~~f~~~-----------------~~~~~Ri~~~--~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 303 DYALRLLENGIVVAPGENFGSG-----------------EEGYVRVALV--PTLEECEEALRLWER 349 (350)
T ss_pred HHHHHHHHCCEEEcCchhhCCC-----------------CCCEEEEEec--CCHHHHHHHHHHHhc
Confidence 7877775 9999998765330 1378999986 478999999988875
No 95
>PRK12414 putative aminotransferase; Provisional
Probab=99.97 E-value=1.7e-28 Score=230.22 Aligned_cols=319 Identities=14% Similarity=0.070 Sum_probs=222.7
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCC---CCcEEEeCChhHHHHHHHHHhHhhhcc
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYAD---PREIIWTSGATESNNLAIKGAAHFYKK 84 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~---~~~i~~~~g~t~a~~~~l~~l~~~~~~ 84 (397)
++++.+.+++.+.+... .. .|..........+.+++.+++++|++ +++|++|+|+++|+..++.++. +
T Consensus 42 ~~~~~~~~~~~~~~~~~----~~-~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~~~~~~l~----~ 112 (384)
T PRK12414 42 APDPALVEGVARAMRDG----HN-QYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEGLYAAISALV----H 112 (384)
T ss_pred CCCHHHHHHHHHHHHhC----CC-CcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHHHHHHHhc----C
Confidence 45788899888876531 11 22222233456667777777788874 3579999999999999999887 7
Q ss_pred CCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCC-CCCCCHHHHHHHhcCCceEEEEecccCccccccc---HHHHHH
Q psy8850 85 RGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN-NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---ILEIGE 160 (397)
Q Consensus 85 ~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~-~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~---l~~i~~ 160 (397)
+||+|++++|+|..+...+... |.+++.+|.++ ++.+|++.+++++++++++|++++++||||.+++ +++|++
T Consensus 113 ~gd~Vlv~~p~y~~~~~~~~~~---g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~NPTG~~~s~~~~~~i~~ 189 (384)
T PRK12414 113 PGDEVIYFEPSFDSYAPIVRLQ---GATPVAIKLSPEDFRVNWDEVAAAITPRTRMIIVNTPHNPSATVFSAADLARLAQ 189 (384)
T ss_pred CCCEEEEeCCCccchHHHHHHc---CCEEEEEecCccccccCHHHHHhhcCcccEEEEEcCCCCCCCcCCCHHHHHHHHH
Confidence 9999999999999887777766 89999999874 5678999999999889999999999999999987 677888
Q ss_pred HHHhcCcEEEEecccccCc----cccccCc----ccccEEEeccccccCCCC--ceEEEEecCCCCccccccccCCcccc
Q psy8850 161 LCRSKGVIFHCDAAQAVGK----IDINIQN----YKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYG 230 (397)
Q Consensus 161 l~~~~gi~livD~a~~~~~----~~~~~~~----~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~ 230 (397)
+|++||+++|+|++|.... ....+.. .+..+++.|++|.+|.+| +|+++++++....+......
T Consensus 190 ~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~~~~l~~~l~~~~~~------ 263 (384)
T PRK12414 190 LTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLAPAELMDEIRKVHQF------ 263 (384)
T ss_pred HHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccceEEEEecCHHHHHHHHHHHhh------
Confidence 9999999999999997321 1111111 124588999999666555 78898887665554433211
Q ss_pred ccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecC---CChHHHH
Q psy8850 231 LRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF---IEGESLL 307 (397)
Q Consensus 231 ~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 307 (397)
.....+.....++..+++.. ....+..+.++++++.+.+.|++ . ++.+..+.+ +.++++.++. ....++.
T Consensus 264 -~~~~~s~~~q~a~~~~l~~~-~~~~~~~~~~~~~r~~l~~~L~~-~-g~~~~~~~g---g~~~~~~~~~~~~~~~~~~~ 336 (384)
T PRK12414 264 -MVFSADTPMQHAFAEALAEP-ASYLGLGAFYQRKRDLLARELAG-S-RFELLPSEG---SFFMLARFRHFSDESDSDFV 336 (384)
T ss_pred -eecCCCcHHHHHHHHHhcCC-hHHHHHHHHHHHHHHHHHHHHHh-C-CCeecCCCc---ceEEEEcccccCCCCHHHHH
Confidence 01122333344443444321 12345677888999999999998 4 565554332 3345555543 2344555
Q ss_pred -HHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHH
Q psy8850 308 -MAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 368 (397)
Q Consensus 308 -~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~ 368 (397)
..+. ||.+.+|..|... ....++|||+++. +++++++.+++|.+
T Consensus 337 ~~~l~~~gV~v~pg~~f~~~---------------~~~~~~iRis~~~--~~~~~~~~~~rl~~ 383 (384)
T PRK12414 337 LRLIRDARVATIPLSAFYTD---------------GTDTGLIRLSFSK--DDATLVEGARRLCS 383 (384)
T ss_pred HHHHHhCCEEEecchhhcCC---------------CCCCCEEEEEecC--CHHHHHHHHHHHhh
Confidence 3343 9999999766431 0113789999995 68999999888864
No 96
>PRK09082 methionine aminotransferase; Validated
Probab=99.97 E-value=8.3e-29 Score=232.70 Aligned_cols=320 Identities=14% Similarity=0.089 Sum_probs=228.1
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCC--CC-cEEEeCChhHHHHHHHHHhHhhhcc
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYAD--PR-EIIWTSGATESNNLAIKGAAHFYKK 84 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~--~~-~i~~~~g~t~a~~~~l~~l~~~~~~ 84 (397)
++++.+.+++.+.+.... . .|.......+..+.+.+.+.++++.. ++ +|++|+|+++|+.+++.++. +
T Consensus 43 ~~~~~~~~~~~~~~~~~~----~-~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al~~~~~~~~----~ 113 (386)
T PRK09082 43 DGPPYLVEALAYAMAAGH----N-QYPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEALFAAILALV----R 113 (386)
T ss_pred CCCHHHHHHHHHHHHcCC----C-CCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHHHHHHHHHc----C
Confidence 346788888888765311 1 22222233455666777777777863 33 79999999999999999887 7
Q ss_pred CCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccC-CCCCCCHHHHHHHhcCCceEEEEecccCccccccc---HHHHHH
Q psy8850 85 RGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPK-NNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---ILEIGE 160 (397)
Q Consensus 85 ~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~-~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~---l~~i~~ 160 (397)
+||+|+++.++|+++...++.. |.+++.++.+ +++.+|+++++++++++++++++++++||||.+++ +++|.+
T Consensus 114 ~gd~Vli~~p~y~~~~~~~~~~---g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~ 190 (386)
T PRK09082 114 PGDEVIVFDPSYDSYAPAIELA---GGRAVRVALQPPDFRVDWQRFAAAISPRTRLIILNTPHNPSGTVWSAADMRALWQ 190 (386)
T ss_pred CCCEEEEeCCCchhhHHHHHHc---CCEEEEEecCcccccCCHHHHHHhcCccceEEEEeCCCCCCCcCCCHHHHHHHHH
Confidence 9999999999999998888776 9999999997 45789999999999989999999999999999866 677899
Q ss_pred HHHhcCcEEEEecccccCcc----ccc---cCc-ccccEEEeccccccCCCC--ceEEEEecCCCCccccccccCCcccc
Q psy8850 161 LCRSKGVIFHCDAAQAVGKI----DIN---IQN-YKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYG 230 (397)
Q Consensus 161 l~~~~gi~livD~a~~~~~~----~~~---~~~-~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~ 230 (397)
+|++||+++|+|++|+.... ... ... .+..+++.|++|.+|.+| +|+++++++....+......
T Consensus 191 ~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~~~~l~~~~~~~~~~------ 264 (386)
T PRK09082 191 LIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVAPAALSAEFRKVHQY------ 264 (386)
T ss_pred HHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhhhhhhhhCCHHHHHHHHHHHhh------
Confidence 99999999999999863221 111 111 245688999999766545 79999887665555443210
Q ss_pred ccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEec---CCChHHHH
Q psy8850 231 LRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN---FIEGESLL 307 (397)
Q Consensus 231 ~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 307 (397)
.....+.....++...++...++++++++.++++++.+.+.|++ .++.+..+.+ +..+++.++ +.+..++.
T Consensus 265 -~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~--~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~~ 338 (386)
T PRK09082 265 -NTFTVNTPAQLALADYLRAEPEHYLELPAFYQAKRDRFRAALAN--SRFKLLPCEG---TYFQLVDYSAISDLDDVEFC 338 (386)
T ss_pred -hcCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHh--CCCcccCCCe---eEEEEEeccccCCCCHHHHH
Confidence 01123333444444455423345777888899999999999988 4665544322 345566665 34567787
Q ss_pred HHh-C--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHH
Q psy8850 308 MAI-K--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 368 (397)
Q Consensus 308 ~~l-~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~ 368 (397)
+.| . +|.+.+|..|... +.+.+++||+++. +++++++.+++|++
T Consensus 339 ~~l~~~~~v~v~pg~~f~~~---------------~~~~~~~Ri~~~~--~~~~l~~~~~rl~~ 385 (386)
T PRK09082 339 QWLTREHGVAAIPLSVFYAD---------------PFPHRLVRLCFAK--QEETLDAAAERLCQ 385 (386)
T ss_pred HHHHHhCCEEEeCcHHhCCC---------------CCCCCEEEEEecC--CHHHHHHHHHHHhh
Confidence 765 3 8999998755320 1124789999985 78899999988875
No 97
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.97 E-value=8.2e-29 Score=236.01 Aligned_cols=291 Identities=14% Similarity=0.111 Sum_probs=215.3
Q ss_pred HHHHHHHHHHHHhCC---CCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEecc
Q psy8850 42 AIEKARNEVAQLIYA---DPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKP 118 (397)
Q Consensus 42 ~~~~~~~~la~~~~~---~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~ 118 (397)
...++++.++++++. ++++|++|+|+++|+.+++.++. ++||.|++.+|+|+.+...+... |.+++.+|.
T Consensus 122 g~~~lr~~ia~~~~~~~~~~~~Iiit~G~~~al~~~~~~l~----~pgd~Vlv~~P~y~~~~~~~~~~---g~~~~~v~~ 194 (431)
T PRK15481 122 VSPELHAWAARWLRDDCPVAFEIDLTSGAIDAIERLLCAHL----LPGDSVAVEDPCFLSSINMLRYA---GFSASPVSV 194 (431)
T ss_pred CCHHHHHHHHHHHhhccCCcCeEEEecCcHHHHHHHHHHhC----CCCCEEEEeCCCcHHHHHHHHHc---CCeEEeecc
Confidence 346677888888762 34589999999999999999988 89999999999999999888887 999999999
Q ss_pred CCCCCCCHHHHHHHhcCCceEEEEe-cccCcccccccHH---HHHHHHHhc-CcEEEEecccccCcc--ccc-cC-cccc
Q psy8850 119 KNNGLITLSQLEEKICSDTILVSVM-LVNNEIGVIQPIL---EIGELCRSK-GVIFHCDAAQAVGKI--DIN-IQ-NYKV 189 (397)
Q Consensus 119 ~~~~~~d~~~l~~~i~~~~~~v~~~-~~~~~tG~~~~l~---~i~~l~~~~-gi~livD~a~~~~~~--~~~-~~-~~~~ 189 (397)
++++ +|++++++++++++++++++ ++|||||.+++.+ +|+++|+++ +++||+|++|+.... ... +. ..+.
T Consensus 195 ~~~g-~~~~~l~~~~~~~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~ 273 (431)
T PRK15481 195 DAEG-MQPEKLERALAQGARAVILTPRAHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSPYHSVIPQTTQR 273 (431)
T ss_pred CCCC-CCHHHHHHHHhcCCCEEEECCCCCCCCCccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCCCCCCCcCCCCC
Confidence 7665 89999999998888888776 9999999999965 899999999 999999999872211 011 11 1245
Q ss_pred cEEEeccccccCCCC--ceEEEEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHH--HHHHHHHHHHHHHH
Q psy8850 190 DLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLA--RIEMKEELKRILFL 265 (397)
Q Consensus 190 d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~--~~~~~~~~~~~~~~ 265 (397)
.+++.|++|.+| +| +|+++.+++....+...... .....+.....++..+++.. .+++.+.++.++++
T Consensus 274 vi~~~SfSK~~~-~GlRiG~~i~~~~~~~~~~~~~~~-------~~~~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~ 345 (431)
T PRK15481 274 WALIRSVSKALG-PDLRLAFVASDSATSARLRLRLNS-------GTQWVSHLLQDLVYACLTDPEYQARLAQARLFYAQR 345 (431)
T ss_pred EEEEeeeccccC-CCceeEEEeCCHHHHHHHHHHHhc-------cccCCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHH
Confidence 688999999666 35 78888876655554322111 01123444444444555432 23467788999999
Q ss_pred HHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCChHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccC
Q psy8850 266 QKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAH 343 (397)
Q Consensus 266 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~ 343 (397)
++.+.+.|++ . ++.+..+.+ +.++++.++. +..++...+. ||.+.+|..|... ..+
T Consensus 346 r~~~~~~L~~-~-~~~~~~p~g---g~f~~~~l~~-~~~~~~~~l~~~gV~v~pg~~f~~~----------------~~~ 403 (431)
T PRK15481 346 RQKLARALQQ-Y-GIAIPSPGD---GLNLWLPLDT-DSQATALTLAKSGWLVREGEAFGVS----------------APS 403 (431)
T ss_pred HHHHHHHHHH-c-CCccccCCC---eEEEEEECCC-CHHHHHHHHHHCCcEEecCCccccC----------------CCC
Confidence 9999999998 4 555433333 5566777764 4566766665 9999999766430 113
Q ss_pred ceEEEeeCCCCCHHHHHHHHHHHHHHHH
Q psy8850 344 SSIRFTIGRFTTEKEIDFTIKLLKMKVK 371 (397)
Q Consensus 344 ~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 371 (397)
+++||+++. .+++++++++++|.+++.
T Consensus 404 ~~iRis~~~-~~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 404 HGLRITLST-LNDAEINRLAADLHQALN 430 (431)
T ss_pred CeEEEEcCC-CChHHHHHHHHHHHHHhc
Confidence 689999986 569999999999998763
No 98
>PRK07550 hypothetical protein; Provisional
Probab=99.97 E-value=8.6e-29 Score=232.83 Aligned_cols=317 Identities=15% Similarity=0.094 Sum_probs=223.4
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHh----C--CCCCcEEEeCChhHHHHHHHHHhHhh
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLI----Y--ADPREIIWTSGATESNNLAIKGAAHF 81 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~--~~~~~i~~~~g~t~a~~~~l~~l~~~ 81 (397)
++++.+.+++.+.+... ... .|.. .....++++++++++ | .++++|++|+|+++|+.+++.++.
T Consensus 42 ~~~~~~~~~~~~~~~~~---~~~-~Y~~----~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~-- 111 (386)
T PRK07550 42 PPPPELLRALAEAAADP---AAH-LYGP----VEGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQAFWAAMVTLA-- 111 (386)
T ss_pred CCCHHHHHHHHHHHhCc---CCc-CCCC----CCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhc--
Confidence 34677888877766421 011 2211 123445555555554 4 567889999999999999999887
Q ss_pred hccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCC--CCCCCHHHHHHHhcCCceEEEEecccCccccccc---HH
Q psy8850 82 YKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN--NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---IL 156 (397)
Q Consensus 82 ~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~---l~ 156 (397)
++||+|++++|.|+.+...+... |.+++.++.++ ++.+|+++++++++++++++++++|+||||.++| ++
T Consensus 112 --~~gd~Vlv~~p~y~~~~~~~~~~---g~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~P~NPtG~~~~~~~~~ 186 (386)
T PRK07550 112 --GAGDEVILPLPWYFNHKMWLDML---GIRPVYLPCDEGPGLLPDPAAAEALITPRTRAIALVTPNNPTGVVYPPELLH 186 (386)
T ss_pred --CCCCEEEEcCCCCcchHHHHHhc---CCEEEEEecCCCcCCCCCHHHHHHHhcccCcEEEEeCCCCCCCcccCHHHHH
Confidence 79999999999998887766655 99999999974 3467999999999989999999999999999998 67
Q ss_pred HHHHHHHhcCcEEEEecccccCc----ccccc-C--c-ccccEEEeccccccCCCC--ceEEEEecCCCCccccccccCC
Q psy8850 157 EIGELCRSKGVIFHCDAAQAVGK----IDINI-Q--N-YKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGG 226 (397)
Q Consensus 157 ~i~~l~~~~gi~livD~a~~~~~----~~~~~-~--~-~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~ 226 (397)
+|+++|++||++||+|++|+... .+... . . ....+++.|++|.+|.+| +|+++++++....+......
T Consensus 187 ~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~-- 264 (386)
T PRK07550 187 ELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVVASPARIAEIEKFMDT-- 264 (386)
T ss_pred HHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccCcccceEeeecCHHHHHHHHHHHhh--
Confidence 89999999999999999987321 11111 1 1 123577899999555334 89999887655555433221
Q ss_pred ccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEec--CCChH
Q psy8850 227 HEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN--FIEGE 304 (397)
Q Consensus 227 ~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 304 (397)
. ...++.....++..+++.+.++.++.++++.++++.+.+.|.+ .+++.+. +.+ +.++++.++ +.++.
T Consensus 265 ----~-~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~-~~g---~~~~~~~~~~~~~~~~ 334 (386)
T PRK07550 265 ----V-AICAPRIGQIAVAWGLPNLADWRAGNRAEIARRRDAFRAVFAR-LPGWELL-ASG---AYFAYVRHPFPDRPSR 334 (386)
T ss_pred ----c-ccCCCcHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHh-CCCceeC-CCc---eEEEEecCCCCCCCHH
Confidence 0 1123334444455566555556677788889999999999988 5565433 211 455666665 35677
Q ss_pred HHHHHh-C--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHH
Q psy8850 305 SLLMAI-K--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (397)
Q Consensus 305 ~~~~~l-~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 369 (397)
++...| + ||.+.+|..|.. ...+++||+++. .+++++++++++|.++
T Consensus 335 ~l~~~l~~~~gv~v~pg~~f~~-----------------~~~~~iRis~~~-~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 335 EVARRLAKEAGILCLPGTMFGP-----------------GQEGYLRLAFAN-ADVAGIGELVERLRAF 384 (386)
T ss_pred HHHHHHHHhcCEEEeCchhhCC-----------------CCCCEEEEEeec-CCHHHHHHHHHHHHhh
Confidence 888775 2 899999876532 113789999985 5699999999998765
No 99
>PRK07683 aminotransferase A; Validated
Probab=99.97 E-value=2.8e-28 Score=229.09 Aligned_cols=318 Identities=16% Similarity=0.194 Sum_probs=225.3
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHh----CC--CCC-cEEEeCChhHHHHHHHHHhHh
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLI----YA--DPR-EIIWTSGATESNNLAIKGAAH 80 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~~--~~~-~i~~~~g~t~a~~~~l~~l~~ 80 (397)
++++.+.+++.+.+.... . .|.. .....++|+.+++++ |. +++ +|++|+|+++|+.+++.++.
T Consensus 41 ~~~~~~~~a~~~~~~~~~----~-~Y~~----~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~- 110 (387)
T PRK07683 41 PTPSHVKEAAKRAITENY----T-SYTH----NAGLLELRKAACNFVKDKYDLHYSPESEIIVTIGASEAIDIAFRTIL- 110 (387)
T ss_pred CCCHHHHHHHHHHHhcCC----C-CCCC----CCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhC-
Confidence 446788899888876421 1 1211 223566677777766 43 666 89999999999999999887
Q ss_pred hhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCC-CCCCCHHHHHHHhcCCceEEEEecccCccccccc---HH
Q psy8850 81 FYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN-NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---IL 156 (397)
Q Consensus 81 ~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~-~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~---l~ 156 (397)
++||+|+++.+.|+.+...+..+ |.+++.++.+. +..+|.+++++.++++++++++++++||||.+++ ++
T Consensus 111 ---~~gd~Vl~~~p~y~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~i~~p~NPtG~~~s~~~~~ 184 (387)
T PRK07683 111 ---EPGTEVILPAPIYPGYEPIIRLC---GAKPVFIDTRSTGFRLTAEALENAITEKTRCVVLPYPSNPTGVTLSKEELQ 184 (387)
T ss_pred ---CCCCEEEEcCCCccchHHHHHHc---CCEEEEeecCcccCCCCHHHHHHhcCcCceEEEEeCCCCCCCcCCCHHHHH
Confidence 78999999999999988887776 99999999875 4467889999999889999999999999999988 67
Q ss_pred HHHHHHHhcCcEEEEecccccCcc---ccccCc----ccccEEEeccccccCCCC--ceEEEEecCCCCccccccccCCc
Q psy8850 157 EIGELCRSKGVIFHCDAAQAVGKI---DINIQN----YKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGH 227 (397)
Q Consensus 157 ~i~~l~~~~gi~livD~a~~~~~~---~~~~~~----~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~ 227 (397)
+|+++|+++|+++|+|++|..... ...+.. .+..+++.|++|.+|.+| +|+++++++..+.+.....
T Consensus 185 ~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~~~~l~~~~~~~~~---- 260 (387)
T PRK07683 185 DIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFAPSYLAKHILKVHQ---- 260 (387)
T ss_pred HHHHHHHHcCeEEEEecccccceeCCCcCChhhccCCcCCeEEEeeccccccCccceeEEEEcCHHHHHHHHHHHH----
Confidence 889999999999999999873321 111111 135688999999766445 7898888765555443211
Q ss_pred cccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecC--CChHH
Q psy8850 228 EYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF--IEGES 305 (397)
Q Consensus 228 ~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 305 (397)
+.....+.....++...++.....+++.++++.++++.+.+.|.+ . ++.+..+.+ +.+++..++. .++.+
T Consensus 261 ---~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~-~-~~~~~~~~~---~~~~~~~~~~~~~~~~~ 332 (387)
T PRK07683 261 ---YNVTCASSISQYAALEALTAGKDDAKMMRHQYKKRRDYVYNRLIS-M-GLDVEKPTG---AFYLFPSIGHFTMSSFD 332 (387)
T ss_pred ---hccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHH-c-CCcccCCCe---eEEEEEecccCCCCHHH
Confidence 111122223333333444432234667788888999999999988 4 555444332 3445555553 35566
Q ss_pred HHHHh-C--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHH
Q psy8850 306 LLMAI-K--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKK 372 (397)
Q Consensus 306 ~~~~l-~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 372 (397)
+...+ . ||.+.+|..|.. ...++|||+++. +++++++++++|.+++.+
T Consensus 333 ~~~~ll~~~gI~v~pg~~f~~-----------------~~~~~~Ri~~~~--~~~~~~~al~~l~~~l~~ 383 (387)
T PRK07683 333 FALDLVEEAGLAVVPGSAFSE-----------------YGEGYVRLSYAY--SIETLKEGLDRLEAFLQQ 383 (387)
T ss_pred HHHHHHHhCCEEEcCchhhCC-----------------CCCCeEEEEecC--CHHHHHHHHHHHHHHHHh
Confidence 66553 3 999999976543 113789999985 789999999999988754
No 100
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.97 E-value=2.6e-28 Score=226.85 Aligned_cols=307 Identities=15% Similarity=0.113 Sum_probs=216.7
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCC
Q psy8850 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRG 86 (397)
Q Consensus 7 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g 86 (397)
.++|+.+++++.+.+.... .|.. ....++|+++++++++++++|++|+|+++++..++.++ .+|
T Consensus 32 ~~~p~~~~~a~~~~~~~~~------~y~~-----~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~~l-----~~g 95 (356)
T PRK08056 32 LGMPVSLKRAIIDNLDCAE------RYPD-----VEYRHLHQALARHHQVPASWILAGNGETESIFAVVSGL-----KPR 95 (356)
T ss_pred CCCCHHHHHHHHHHHHhcc------cCcC-----ccHHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHHHh-----CCC
Confidence 3578899999988775422 1111 13688999999999999999999999999999998875 356
Q ss_pred CEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCC--CCCCHHHHHHHhcCCceEEEEecccCccccccc---HHHHHHH
Q psy8850 87 KHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNN--GLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---ILEIGEL 161 (397)
Q Consensus 87 ~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~--~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~---l~~i~~l 161 (397)
+ +++..|.|..+...++.. |.+++.+|.+++ ..+| +++++.+.+++++|++++|+||||.+++ +++|+++
T Consensus 96 ~-viv~~P~y~~~~~~~~~~---g~~~~~v~~~~~~~~~~~-~~~~~~~~~~~k~v~l~~p~NPTG~~~~~~~~~~i~~~ 170 (356)
T PRK08056 96 R-AMIVTPGFAEYRRALQQV---GCEIRRYSLREADGWQLT-DAILEALTPDLDCLFLCTPNNPTGLLPERQLLQAIAER 170 (356)
T ss_pred C-EEEeCCCcHHHHHHHHHc---CCeEEEEecccccCCCcc-HHHHHhccCCCCEEEEeCCcCCCCCCCCHHHHHHHHHH
Confidence 5 566678888887776666 999999998643 3344 4566667788999999999999999999 6788999
Q ss_pred HHhcCcEEEEecccccCcc----c-cccCcccccEEEeccccccCCCC--ceEEEEec-CCCCccccccccCCccccccC
Q psy8850 162 CRSKGVIFHCDAAQAVGKI----D-INIQNYKVDLMSFSAHKIYGPKG--IGALYIRR-NPRTRIEAQIHGGGHEYGLRS 233 (397)
Q Consensus 162 ~~~~gi~livD~a~~~~~~----~-~~~~~~~~d~~~~s~~K~~g~~g--~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 233 (397)
|+++|++||+|++|.-... . ..+...+.++++.|+||.+|.+| +|++++++ +....+.... ..
T Consensus 171 a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~~~~~~l~~~~---------~~ 241 (356)
T PRK08056 171 CKSLNIALILDEAFIDFIPDETGFIPQLADNPHLWVLRSLTKFYAIPGLRLGYLVNSDDAAVARMRRQQ---------MP 241 (356)
T ss_pred HHhcCCEEEEecchhccCCcchHHHHHhccCCCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhC---------CC
Confidence 9999999999999852211 0 11223356789999999777555 78888743 3333332211 01
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCChHHHHHHhC--
Q psy8850 234 GTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAIK-- 311 (397)
Q Consensus 234 ~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-- 311 (397)
...+.....+...+++. .....+..+.++++++++.+.|++ ++++.+..+ . +..+++.++. +..++.+.|.
T Consensus 242 ~~~~~~~~~~a~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~-~~~~~~~~~-~---~~~~~~~~~~-~~~~~~~~l~~~ 314 (356)
T PRK08056 242 WSINAFAALAGEVILQD-RAYQQATWQWLAEEGARFYQALCA-LPLLTVWPG-R---ANYLFLRCER-PDIDLQRALLTQ 314 (356)
T ss_pred CchhHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHhc-CCCcEEcCC-C---CcEEEEEcCC-ChHHHHHHHHHC
Confidence 12333333333334421 223566678889999999999988 777765432 2 4455666653 3566777765
Q ss_pred CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHH
Q psy8850 312 DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKV 370 (397)
Q Consensus 312 ~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~ 370 (397)
||.+.+|..|.. ...++|||+++ +.++.++++++|++++
T Consensus 315 gI~v~~~~~f~~-----------------~~~~~iRis~~---~~~~~~~l~~~l~~~~ 353 (356)
T PRK08056 315 RILIRSCANYPG-----------------LDSRYYRVAIR---SAAENERLLAALRNVL 353 (356)
T ss_pred CeEEEECCCCCC-----------------CCCCEEEEEEc---CHHHHHHHHHHHHHHH
Confidence 999999875532 11378999997 6899999999998764
No 101
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.97 E-value=2.6e-28 Score=227.74 Aligned_cols=310 Identities=15% Similarity=0.116 Sum_probs=223.1
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCC
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGK 87 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~ 87 (397)
++|+.+++++.+.......++.. ...++++++++++++++++|++++|+++++..++.++. ++||
T Consensus 45 ~~~~~~~~a~~~~~~~~~~Y~~~-----------~~~~Lr~~ia~~~~~~~~~I~it~G~~~~l~~~~~~~~----~~gd 109 (369)
T PRK08153 45 GPSPSVIAAMREAAAEIWKYGDP-----------ENHDLRHALAAHHGVAPENIMVGEGIDGLLGLIVRLYV----EPGD 109 (369)
T ss_pred CCCHHHHHHHHHHHHHhhcCCCC-----------ccHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhc----CCCC
Confidence 56888999998876542222211 25689999999999988899999999999999999887 7999
Q ss_pred EEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHh-cCCceEEEEecccCcccccccHHHHHHHHHhc-
Q psy8850 88 HIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKI-CSDTILVSVMLVNNEIGVIQPILEIGELCRSK- 165 (397)
Q Consensus 88 ~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i-~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~- 165 (397)
.|++.+|+|+.+...+... |.+++.+|.+.++ +|++++++.+ .++++++++++|+||||.++|.+++.++++..
T Consensus 110 ~vlv~~p~y~~~~~~~~~~---g~~~~~vp~~~~~-~~~~~l~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~l~~~~~ 185 (369)
T PRK08153 110 PVVTSLGAYPTFNYHVAGF---GGRLVTVPYRDDR-EDLDALLDAARRENAPLVYLANPDNPMGSWHPAADIVAFIEALP 185 (369)
T ss_pred EEEECCCcchHHHHHHHHc---CCeEEEeeCCCCC-CCHHHHHHHhcccCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCC
Confidence 9999999999998777766 8999999987654 7899998766 46789999999999999999987777766543
Q ss_pred -CcEEEEecccccCcc---ccccC-cccccEEEeccccccCCCC--ceEEEEecCCCCccccccccCCccccccCCCCch
Q psy8850 166 -GVIFHCDAAQAVGKI---DINIQ-NYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLAT 238 (397)
Q Consensus 166 -gi~livD~a~~~~~~---~~~~~-~~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (397)
|++||+|++|+.... ...+. ..+..+++.|++|.+|.+| +|+++++++....+...... ...+.
T Consensus 186 ~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~~~~~~~~l~~~~~~---------~~~s~ 256 (369)
T PRK08153 186 ETTLLVLDEAYCETAPAGAAPPIDTDDPNVIRMRTFSKAYGLAGARVGYAIGAPGTIKAFDKVRNH---------FGMNR 256 (369)
T ss_pred CCcEEEEeCchhhhcCcccchhhhhcCCCEEEEecchHhccCcchheeeeecCHHHHHHHHHhhcC---------CCCCH
Confidence 999999999872211 11111 1134588999999766445 69999886655544432211 12344
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecC--CChHHHHHHhC--CcE
Q psy8850 239 HQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF--IEGESLLMAIK--DIA 314 (397)
Q Consensus 239 ~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~--~i~ 314 (397)
....+..++++. .+.+++..+.+.++++++.+.|++ . ++.+. +.. +.++++.++. ....++.+.+. ||.
T Consensus 257 ~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~~~~~L~~-~-g~~~~-p~~---~~f~~~~~~~~~~~a~~l~~~l~~~Gi~ 329 (369)
T PRK08153 257 IAQAAALAALKD-QAYLAEVVGKIAAARDRIAAIARA-N-GLTPL-PSA---TNFVAIDCGRDGAFARAVLDGLIARDIF 329 (369)
T ss_pred HHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHH-C-CCccC-CCc---CcEEEEECCCCcccHHHHHHHHHHCCeE
Confidence 555555556642 234677788888999999999987 4 54433 212 4455555532 23567777664 888
Q ss_pred ec-ccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHHHh
Q psy8850 315 VS-SGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKLRE 375 (397)
Q Consensus 315 ~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 375 (397)
+. ++... ..+++|++++ +++++++++++|++++...++
T Consensus 330 v~~p~~~~--------------------~~~~iRis~~---~~~~~~~~~~al~~~~~~~~~ 368 (369)
T PRK08153 330 VRMPGVAP--------------------LDRCIRVSCG---PDEELDLFAEALPEALEAARK 368 (369)
T ss_pred EeeCCCCC--------------------CCCeEEEecC---CHHHHHHHHHHHHHHHHHhhc
Confidence 84 43210 1378999997 689999999999999876654
No 102
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.97 E-value=3.5e-28 Score=231.07 Aligned_cols=300 Identities=16% Similarity=0.167 Sum_probs=225.6
Q ss_pred HHHHHHHHHHHHHh----C--CCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEE
Q psy8850 41 KAIEKARNEVAQLI----Y--ADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVT 114 (397)
Q Consensus 41 ~~~~~~~~~la~~~----~--~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~ 114 (397)
.....+|+.+++++ | +++++|++|+|+++|++++++.+. ++||.|++.+|+|+.....++.+ |.++.
T Consensus 132 ~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~al~l~~~~l~----~pGd~v~vE~PtY~~~~~~~~~~---g~~~~ 204 (459)
T COG1167 132 AGLPELREAIAAYLLARRGISCEPEQIVITSGAQQALDLLLRLLL----DPGDTVLVEDPTYPGALQALEAL---GARVI 204 (459)
T ss_pred CCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHHHHHHHHHHHhC----CCCCEEEEcCCCcHHHHHHHHHc---CCcEE
Confidence 45566666666665 3 466799999999999999999998 89999999999999999888888 99999
Q ss_pred EeccCCCCCCCHHHHHHHhcC-CceEE-EEecccCcccccccH---HHHHHHHHhcCcEEEEecccccCcc----c---c
Q psy8850 115 YLKPKNNGLITLSQLEEKICS-DTILV-SVMLVNNEIGVIQPI---LEIGELCRSKGVIFHCDAAQAVGKI----D---I 182 (397)
Q Consensus 115 ~v~~~~~~~~d~~~l~~~i~~-~~~~v-~~~~~~~~tG~~~~l---~~i~~l~~~~gi~livD~a~~~~~~----~---~ 182 (397)
.||.|++| +|+++|++.+.. +++++ ++++.+||||.+++. ++|.++|++||++||+|+.|+-... + .
T Consensus 205 ~vp~d~~G-~~~e~le~~~~~~~~k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~ 283 (459)
T COG1167 205 PVPVDEDG-IDPEALEEALAQWKPKAVYVTPTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLK 283 (459)
T ss_pred ecCCCCCC-CCHHHHHHHHhhcCCcEEEECCCCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChH
Confidence 99999777 899999999876 57766 566888999999997 5799999999999999999982211 1 1
Q ss_pred ccCcccccEEEeccccccCC-CCceEEEEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHH--HHHHHHHHHH
Q psy8850 183 NIQNYKVDLMSFSAHKIYGP-KGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFR--LARIEMKEEL 259 (397)
Q Consensus 183 ~~~~~~~d~~~~s~~K~~g~-~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~--~~~~~~~~~~ 259 (397)
.+...+..+++.||+|...| ..+||++++++..+.+...... ....++......+...+. ....++.+++
T Consensus 284 ~ld~~~rViy~gSFSK~l~PglRlG~vv~p~~~~~~~~~~k~~-------~~~~~s~~~Q~~la~~l~~G~~~~hl~~lR 356 (459)
T COG1167 284 ALDAPGRVIYLGSFSKTLAPGLRLGYVVAPPELIEKLLRLKQA-------ADLGPSSLSQAALAAFLLSGHYDRHLRRLR 356 (459)
T ss_pred hhCCCCCEEEEeeehhhcccccceeeeeCCHHHHHHHHHHHHH-------hcCCCChHHHHHHHHHHHcCCHHHHHHHHH
Confidence 12223577999999995443 3589999997766665433211 111233333333333443 3455788999
Q ss_pred HHHHHHHHHHHHHHhhhcC-cEEEeCCCCCCCCceEEEEecCC-ChHHHHHHhC--CcEecc-cCccCCCCCChhhHHHh
Q psy8850 260 KRILFLQKRLYNGLMESIE-EIYINGDMNNRIPHNLNISFNFI-EGESLLMAIK--DIAVSS-GSACTSASLEPSYVLRA 334 (397)
Q Consensus 260 ~~~~~~~~~l~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~--~i~~~~-g~~~~~~~~~~~~~~~~ 334 (397)
+.++++++.+.+.|.++++ ...+..+.+ +.++++.++.. +...+...+. |+.+.+ |..|....
T Consensus 357 ~~y~~rr~~l~~~L~~~~~~~~~~~~p~g---G~flwl~l~~~~~~~~l~~~a~~~gv~i~~~g~~f~~~~--------- 424 (459)
T COG1167 357 REYARRRDALLEALAEYLPELATWTRPEG---GLFLWLELPEGIDARELLAAALEKGVVVTPLGSAFSADG--------- 424 (459)
T ss_pred HHHHHHHHHHHHHHHHhCCCCeeeecCCc---eEEEEEEcCCCCCHHHHHHHHHHCCCEEEcCCccccCCC---------
Confidence 9999999999999999666 455555544 56778888753 6666666655 888888 87776521
Q ss_pred hCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHHH
Q psy8850 335 LGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKLR 374 (397)
Q Consensus 335 ~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 374 (397)
...+++|++++. .+.+++++.+..|.+++.+..
T Consensus 425 ------~~~~~~Rl~~s~-~~~e~i~~gi~~l~~~~~~~~ 457 (459)
T COG1167 425 ------DPRNGLRLSFSS-PSEEEIEEGIKRLAALLREAA 457 (459)
T ss_pred ------CCCCeEEEEcCC-CCHHHHHHHHHHHHHHHHHHh
Confidence 124799999997 579999999999999988764
No 103
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.97 E-value=2.2e-28 Score=230.66 Aligned_cols=322 Identities=11% Similarity=0.018 Sum_probs=219.5
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhC---CCCC-cEEEeCChhHHHHHHHHHhHhhhc
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIY---ADPR-EIIWTSGATESNNLAIKGAAHFYK 83 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~---~~~~-~i~~~~g~t~a~~~~l~~l~~~~~ 83 (397)
++++.+.+++.+.+..... |.......+..+.+.+.+.+.+| ++++ +|++|+|+++|+.+++.++.
T Consensus 42 ~~~~~~~~~~~~~~~~~~~------Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~---- 111 (396)
T PRK09147 42 PTPAFIKDALAANLDGLAS------YPTTAGLPALREAIAAWLERRYGLPALDPATQVLPVNGSREALFAFAQTVI---- 111 (396)
T ss_pred CCCHHHHHHHHHHhhhhcC------CCCCCCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChHHHHHHHHHHHc----
Confidence 4577888888876643222 22111122333344444444446 4554 79999999999999999988
Q ss_pred cC---CCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCC--CCCCHHHHHHHhcCCceEEEEecccCccccccc---H
Q psy8850 84 KR---GKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNN--GLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---I 155 (397)
Q Consensus 84 ~~---g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~--~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~---l 155 (397)
++ |+.|+++.|.|+.+...+... |.+++.+|++++ +.+|++++++.+.++++++++++|+||||.+++ +
T Consensus 112 ~~~~~gd~vlv~~P~y~~~~~~~~~~---g~~~~~vp~~~~~~~~~d~~~l~~~~~~~~k~i~l~nP~NPTG~~~s~~~~ 188 (396)
T PRK09147 112 DRDGPGPLVVCPNPFYQIYEGAALLA---GAEPYFLNCDPANNFAPDFDAVPAEVWARTQLLFVCSPGNPTGAVLPLDDW 188 (396)
T ss_pred CCCCCCCEEEEcCCCccchHHHHHhc---CCEEEEeccCccccCccCHHHHHHHHhhccEEEEEcCCCCCcCccCCHHHH
Confidence 78 899999999999998887777 999999999743 478999999888888999999999999999998 5
Q ss_pred HHHHHHHHhcCcEEEEecccccCc-----cccc-c--------CcccccEEEeccccccCCCC--ceEEEEecCCCCccc
Q psy8850 156 LEIGELCRSKGVIFHCDAAQAVGK-----IDIN-I--------QNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIE 219 (397)
Q Consensus 156 ~~i~~l~~~~gi~livD~a~~~~~-----~~~~-~--------~~~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~ 219 (397)
++|+++|++|+++||+|++|+... .+.. + ...+..+++.|++|.+|.+| +|+++.+++..+.+.
T Consensus 189 ~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~~~~~~l~~~~~ 268 (396)
T PRK09147 189 KKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPGLRSGFVAGDAALLKKFL 268 (396)
T ss_pred HHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccccccCCccceeeeecCCHHHHHHHH
Confidence 678888999999999999997321 1110 0 11234588999999655445 788888766555543
Q ss_pred cccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEec
Q psy8850 220 AQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN 299 (397)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (397)
.... ......+.....+..+++.. .+.+.+.++.++++++.+.+.|++ . +.+..+.+ +.++++.++
T Consensus 269 ~~~~-------~~~~~~~~~~q~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~L~~-~--~~~~~p~~---g~f~~~~~~ 334 (396)
T PRK09147 269 LYRT-------YHGCAMPPAVQAASIAAWND-EAHVRENRALYREKFDAVTPILAP-V--LDVQLPDA---GFYLWAKVP 334 (396)
T ss_pred HHhh-------hcccCCCHHHHHHHHHHhcc-hhHHHHHHHHHHHHHHHHHHHHHH-h--cCCCCCCe---eEEEEEECC
Confidence 3211 01112233333332233321 235677788888999999999887 3 33332322 556677776
Q ss_pred CCChHHHHHHh--C-CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHH
Q psy8850 300 FIEGESLLMAI--K-DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKV 370 (397)
Q Consensus 300 ~~~~~~~~~~l--~-~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~ 370 (397)
.+..++...+ + ||.+.+|..|.... .+ ...+.+++||+++. +++++++++++|.+++
T Consensus 335 -~~~~~~~~~ll~~~gv~v~pg~~f~~~~---------~~--~~~~~~~iRi~~~~--~~~~l~~~l~rl~~~~ 394 (396)
T PRK09147 335 -GDDTEFARRLYADYNVTVLPGSYLAREA---------HG--VNPGAGRVRIALVA--PLAECVEAAERIVDFC 394 (396)
T ss_pred -CCHHHHHHHHHHhCCEEEeCCccccccc---------cC--CCCCCCeEEEEecC--CHHHHHHHHHHHHHHh
Confidence 4566776665 2 89999997664310 00 01124789999985 6889999999998765
No 104
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.97 E-value=2.1e-28 Score=230.51 Aligned_cols=315 Identities=15% Similarity=0.094 Sum_probs=220.4
Q ss_pred CCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHh----C---CCCC-cEEEeCChhHHHHHHHHHhHh
Q psy8850 9 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLI----Y---ADPR-EIIWTSGATESNNLAIKGAAH 80 (397)
Q Consensus 9 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~---~~~~-~i~~~~g~t~a~~~~l~~l~~ 80 (397)
+++.+.+++.+.+.... .. .|. .....++++++++++ | ++++ +|++|+|+++++..++.++.
T Consensus 58 ~~~~~~~~l~~~~~~~~---~~-~Y~-----~~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~al~~~~~~~~- 127 (410)
T PRK06290 58 ADESVVEVLCEEAKKPE---NR-GYA-----DNGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKPALAMLPSCFI- 127 (410)
T ss_pred CCHHHHHHHHHHHhCCC---CC-CCC-----CCCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHHHHHHHHHHhC-
Confidence 56778888777653210 00 121 123456666666664 4 5565 79999999999999999888
Q ss_pred hhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCC--CCCCCHHHHHHHhcCCceEEEEecccCccccccc---H
Q psy8850 81 FYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN--NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---I 155 (397)
Q Consensus 81 ~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~---l 155 (397)
++||.|+++.|+|+.+...++.. |.+++.+|.++ ++.+|++++++++.+++++|++++|+||||.+++ +
T Consensus 128 ---~~gd~Vlv~~P~y~~~~~~~~~~---g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~nP~NPTG~v~s~e~l 201 (410)
T PRK06290 128 ---NPGDVTLMTVPGYPVTGTHTKYY---GGEVYNLPLLEENNFLPDLDSIPKDIKEKAKLLYLNYPNNPTGAVATKEFY 201 (410)
T ss_pred ---CCCCEEEEeCCCCccHHHHHHHc---CCEEEEEecCCCcCCcCCHHHHHHhhcccceEEEEECCCCCCCcCCCHHHH
Confidence 79999999999999998877777 99999999974 3567999999999889999999999999999999 4
Q ss_pred HHHHHHHHhcCcEEEEecccccCc---cccc---cC-cccccEEEeccccccCCCC--ceEEEEecCCCCccccccccCC
Q psy8850 156 LEIGELCRSKGVIFHCDAAQAVGK---IDIN---IQ-NYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGG 226 (397)
Q Consensus 156 ~~i~~l~~~~gi~livD~a~~~~~---~~~~---~~-~~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~ 226 (397)
++|+++|++||++||+|++|.... .+.. +. ..+.++++.|++|.+|.+| +|+++.+++....+......
T Consensus 202 ~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~~~~l~~~l~~~~~~-- 279 (410)
T PRK06290 202 EEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVGNELIVKAFATVKDN-- 279 (410)
T ss_pred HHHHHHHHHcCeEEEEecchhhceeCCCCcChhcCCCccccEEEEeechhhcCCchhheEeEEeCHHHHHHHHHHHhc--
Confidence 678888999999999999998322 1111 11 1245799999999666555 79999887655554432211
Q ss_pred ccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecC------
Q psy8850 227 HEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF------ 300 (397)
Q Consensus 227 ~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 300 (397)
...+.+. ....+...+++. .+.+++..+++.++++.+.+.|++ + ++.+..+.+ ...+++.++.
T Consensus 280 ----~~~~~~~-~~q~aa~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~p~g---~f~l~v~lp~~~~~~~ 348 (410)
T PRK06290 280 ----NDSGQFI-AIQKAGIYALDH-PEITEKIREKYSRRLDKLVKILNE-V-GFKAEMPGG---TFYLYVKAPKGTKSGI 348 (410)
T ss_pred ----cccCCcH-HHHHHHHHHhhC-cHHHHHHHHHHHHHHHHHHHHHHh-C-CCeecCCCe---eeEEEEECCCccccCC
Confidence 1111212 222233344432 234677788899999999999998 4 666554433 3344566653
Q ss_pred --CChHHHHHHhC---CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCC-CCCHHHHHHHHHHHHHHHHHH
Q psy8850 301 --IEGESLLMAIK---DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGR-FTTEKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 301 --~~~~~~~~~l~---~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~-~~~~~~i~~~~~~l~~~~~~~ 373 (397)
.+..++.+.|. ++.+.+|..+ ++++||+++. ..++++.++++++|.+.+.++
T Consensus 349 ~~~~~~~~~~~Ll~~~~v~~~p~~~~---------------------~~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~~ 406 (410)
T PRK06290 349 KFENAEEFSQYLIKEKLISTVPWDDA---------------------GHFLRFSVTFEAKDEEEEDRILEEIKRRLSDV 406 (410)
T ss_pred CCCCHHHHHHHHHHhCCEEEECCccc---------------------cCeEEEEEEcccccccchhHHHHHHHHHHhhc
Confidence 24667777775 3555554311 2689999973 357899999999999887654
No 105
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.97 E-value=2.8e-28 Score=230.25 Aligned_cols=319 Identities=15% Similarity=0.123 Sum_probs=218.1
Q ss_pred CCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHh----C--CCCC-cEEEeCChhHHHHHHHHHhHhh
Q psy8850 9 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLI----Y--ADPR-EIIWTSGATESNNLAIKGAAHF 81 (397)
Q Consensus 9 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~--~~~~-~i~~~~g~t~a~~~~l~~l~~~ 81 (397)
+|+.+.+++.+..... ... .| .......++|+.+++++ + +.++ +|++|+|+++|+.+++.+++
T Consensus 47 ~~~~~~~~~~~~~~~~---~~~-~Y----~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~-- 116 (403)
T PRK08636 47 TPQHIIDKLCESAQKP---KTH-GY----SVSKGIYKLRLAICNWYKRKYNVDLDPETEVVATMGSKEGYVHLVQAIT-- 116 (403)
T ss_pred CCHHHHHHHHHHhcCC---ccC-CC----CCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECCChHHHHHHHHHHhC--
Confidence 3555666666554320 011 12 22234455555555554 6 4566 69999999999999999988
Q ss_pred hccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccC--CCCCCCHHH----HHHHhc---CCceEEEEecccCccccc
Q psy8850 82 YKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPK--NNGLITLSQ----LEEKIC---SDTILVSVMLVNNEIGVI 152 (397)
Q Consensus 82 ~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~----l~~~i~---~~~~~v~~~~~~~~tG~~ 152 (397)
++||.|++.+|+|+.+...+... |.+++.+|.+ +++.+|++. ++++++ .+++++++++|+||||.+
T Consensus 117 --~~gd~Vlv~~P~y~~~~~~~~~~---g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~ 191 (403)
T PRK08636 117 --NPGDVAIVPDPAYPIHSQAFILA---GGNVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVNFPHNPTTAT 191 (403)
T ss_pred --CCCCEEEEcCCCCcchHHHHHhc---CCEEEEEeccccccCccChhhhhhHHHHHHhhccCCceEEEEeCCCCCCCcc
Confidence 79999999999999998888877 9999999874 345788775 455554 468899999999999999
Q ss_pred ccH---HHHHHHHHhcCcEEEEecccccCcc----ccccCcc----cccEEEeccccccCCCC--ceEEEEecCCCCccc
Q psy8850 153 QPI---LEIGELCRSKGVIFHCDAAQAVGKI----DINIQNY----KVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIE 219 (397)
Q Consensus 153 ~~l---~~i~~l~~~~gi~livD~a~~~~~~----~~~~~~~----~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~ 219 (397)
++. ++|+++|++|+++||+|++|+.... ...+..+ +..+++.|++|.+|.+| +|+++.++++...+.
T Consensus 192 ~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~iv~~~~li~~~~ 271 (403)
T PRK08636 192 VEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSKSYNMAGWRVGFVVGNKKLVGALK 271 (403)
T ss_pred CCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEecccccCCccceeeeeeCCHHHHHHHH
Confidence 995 6788899999999999999873211 1111111 23456789999665445 799888776555544
Q ss_pred cccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEec
Q psy8850 220 AQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN 299 (397)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (397)
..... ...+.+...+.++. .+++.....+++.++.+.++++.+.+.|++ . ++.+..+.+ +..+++.++
T Consensus 272 ~~~~~------~~~~~~~~~q~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-~~~~~~p~~---g~~~~~~l~ 339 (403)
T PRK08636 272 KIKSW------LDYGMFTPIQVAAT-IALDGDQSCVEEIRETYRKRRDVLIESFAN-A-GWELQKPRA---SMFVWAKIP 339 (403)
T ss_pred HHHHH------hcccCChHHHHHHH-HHHhCcHHHHHHHHHHHHHHHHHHHHHHHH-C-CCcccCCCc---ceEEEEECC
Confidence 33210 01122333333333 444433445777888899999999999988 4 555444333 556677776
Q ss_pred C----CChHHHHHH-hC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHH
Q psy8850 300 F----IEGESLLMA-IK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKK 372 (397)
Q Consensus 300 ~----~~~~~~~~~-l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 372 (397)
. .++.++... ++ ||.+.+|..|.. ...++|||+++ .+++++++.+++|+++++.
T Consensus 340 ~~~~~~~~~~l~~~ll~~~gV~v~pg~~f~~-----------------~~~~~iRi~~~--~~~~~l~~~~~rl~~~l~~ 400 (403)
T PRK08636 340 EPARHLGSLEFSKQLLTEAKVAVSPGIGFGE-----------------YGDEYVRIALI--ENENRIRQAARNIKKFLKE 400 (403)
T ss_pred CccCCCCHHHHHHHHHHhCCEEEecchhhCc-----------------CCCCeEEEEec--CCHHHHHHHHHHHHHHHHh
Confidence 3 235677655 42 899999876532 11379999997 4899999999999998866
Q ss_pred H
Q psy8850 373 L 373 (397)
Q Consensus 373 ~ 373 (397)
+
T Consensus 401 ~ 401 (403)
T PRK08636 401 L 401 (403)
T ss_pred h
Confidence 3
No 106
>PRK06855 aminotransferase; Validated
Probab=99.97 E-value=2.4e-28 Score=232.15 Aligned_cols=327 Identities=15% Similarity=0.164 Sum_probs=217.2
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHh----C--CCCCcEEEeCChhHHHHHHHHHhHhh
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLI----Y--ADPREIIWTSGATESNNLAIKGAAHF 81 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~--~~~~~i~~~~g~t~a~~~~l~~l~~~ 81 (397)
++|+.+.+++.+.+... ..++|.......++|+++++++ | +++++|++|+|+++|+.+++. ++
T Consensus 48 ~~p~~~~~a~~~~~~~~--------~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~al~~~~~-l~-- 116 (433)
T PRK06855 48 KIPDWMKEIVAELVMDD--------KSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLGDAIAKIYG-LL-- 116 (433)
T ss_pred CCCHHHHHHHHHHhhcC--------CCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHHHHHHHHH-hc--
Confidence 56888888888876431 1111222234566677776665 4 567789999999999998875 55
Q ss_pred hccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCC--CCCCCHHHHHHHhc--CCceEEEEecccCccccccc---
Q psy8850 82 YKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN--NGLITLSQLEEKIC--SDTILVSVMLVNNEIGVIQP--- 154 (397)
Q Consensus 82 ~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~--~~~~~v~~~~~~~~tG~~~~--- 154 (397)
++||.|++.+|+|+.+...... ..|.+++.+|.++ ++.+|+++|++++. ++++++++++|+||||.+++
T Consensus 117 --~~Gd~Vlv~~P~Y~~~~~~~~~--~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~i~l~~P~NPTG~~~s~~~ 192 (433)
T PRK06855 117 --RREARVIGPSPAYSTHSSAEAA--HAGYPPVTYRLDPENNWYPDLDDLENKVKYNPSIAGILLINPDNPTGAVYPKEI 192 (433)
T ss_pred --CCCCeEEEeCCCCchHHHHHHH--hcCCeEEEEecccccCCCCCHHHHHHHHhcCCCceEEEEECCCCCCCcCCCHHH
Confidence 7899999999999986533221 2278888888863 34689999999986 46789999999999999999
Q ss_pred HHHHHHHHHhcCcEEEEecccccCcc----ccccCcc---cccEEEeccccccCCCC--ceEEEEecCCC-Ccccccccc
Q psy8850 155 ILEIGELCRSKGVIFHCDAAQAVGKI----DINIQNY---KVDLMSFSAHKIYGPKG--IGALYIRRNPR-TRIEAQIHG 224 (397)
Q Consensus 155 l~~i~~l~~~~gi~livD~a~~~~~~----~~~~~~~---~~d~~~~s~~K~~g~~g--~g~~~~~~~~~-~~~~~~~~~ 224 (397)
+++|+++|++||++||+|++|+.... ...+..+ ...+++.|++|.++.+| +|++++.+... ..+......
T Consensus 193 ~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~~~~~~~~~~~ 272 (433)
T PRK06855 193 LREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRCGWIEVYNADKDEVFKKYINS 272 (433)
T ss_pred HHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceEEEEEEeCCchhhHHHHHHHH
Confidence 46788889999999999999973211 1111111 23488899999655334 78888742111 111100000
Q ss_pred CCccccccCCCCchhHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCC-
Q psy8850 225 GGHEYGLRSGTLATHQIVGMGEAFRL--ARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFI- 301 (397)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~l~~al~~--~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 301 (397)
.........+ ++.....++..+++. ..+.+++.++.++++++.+.+.|++ ++++.+..+.+ +..+++.+++.
T Consensus 273 ~~~~~~~~~~-~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~-~~~~~~~~p~g---g~~~w~~l~~~~ 347 (433)
T PRK06855 273 ILNAKMIEVC-STTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKD-VPGLKVNRTNG---AFYMTVVFEDGV 347 (433)
T ss_pred HHHhhccccC-CChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeeccCCCe---eEEEeecccccc
Confidence 0000001112 333444444455542 2345778888999999999999988 66766554433 45666666531
Q ss_pred ---------------------------ChHHHHHHhC---CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeC
Q psy8850 302 ---------------------------EGESLLMAIK---DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIG 351 (397)
Q Consensus 302 ---------------------------~~~~~~~~l~---~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~ 351 (397)
++.++...+. ||.+.||..|.+ ..+.+||++.
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~------------------~~~~~Rls~~ 409 (433)
T PRK06855 348 LNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCT------------------ELNGFRVTLL 409 (433)
T ss_pred ccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCC------------------CCCceEEEEC
Confidence 2334443332 899999987643 0145999998
Q ss_pred CCCCHHHHHHHHHHHHHHHHHH
Q psy8850 352 RFTTEKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 352 ~~~~~~~i~~~~~~l~~~~~~~ 373 (397)
. .+.+++++.+++|.++++++
T Consensus 410 ~-~~~~~i~~~~~~l~~~~~~~ 430 (433)
T PRK06855 410 E-RDEEKFEWIYQTLAEKIEEY 430 (433)
T ss_pred C-CcHHHHHHHHHHHHHHHHHH
Confidence 7 57999999999999998753
No 107
>PRK09148 aminotransferase; Validated
Probab=99.97 E-value=2.3e-28 Score=230.78 Aligned_cols=322 Identities=14% Similarity=0.077 Sum_probs=220.8
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHh----C--CCCC-cEEEeCChhHHHHHHHHHhHh
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLI----Y--ADPR-EIIWTSGATESNNLAIKGAAH 80 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~--~~~~-~i~~~~g~t~a~~~~l~~l~~ 80 (397)
++|+.+.+++.+.+.. +....|.. .....++++.+++++ | ++++ +|++|+|+++|+.+++.++.
T Consensus 43 ~~~~~~~~~~~~~~~~----~~~~~Y~~----~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~l~- 113 (405)
T PRK09148 43 PTPQHIVDKLCETAQD----PRTHRYSA----SKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEGFANMAQAIT- 113 (405)
T ss_pred CCCHHHHHHHHHHHcC----cccCCCCC----CCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHhc-
Confidence 3467788887776532 11102221 223455666666655 5 4566 79999999999999999987
Q ss_pred hhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHh---cCCceEEEEecccCcccccccH--
Q psy8850 81 FYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKI---CSDTILVSVMLVNNEIGVIQPI-- 155 (397)
Q Consensus 81 ~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i---~~~~~~v~~~~~~~~tG~~~~l-- 155 (397)
++||.|++++|+|+.+...+... |.++..+|.+.++. +++++++++ .++++++++++|+||||.+++.
T Consensus 114 ---~~gd~Vl~~~P~y~~~~~~~~~~---g~~v~~v~~~~~~~-~~~~l~~~~~~~~~~~~~v~l~~P~NPtG~~~s~~~ 186 (405)
T PRK09148 114 ---APGDVILCPNPSYPIHAFGFIMA---GGVIRSVPAEPDEE-FFPALERAVRHSIPKPIALIVNYPSNPTAYVADLDF 186 (405)
T ss_pred ---CCCCEEEEcCCCCcccHHHHHhc---CCEEEEEeCCCCCC-CccCHHHHHhhccccceEEEEeCCCCCCCcCCCHHH
Confidence 79999999999999998777766 99999999875432 244455444 4678999999999999999995
Q ss_pred -HHHHHHHHhcCcEEEEecccccCc----cccccCc----ccccEEEeccccccCCCC--ceEEEEecCCCCcccccccc
Q psy8850 156 -LEIGELCRSKGVIFHCDAAQAVGK----IDINIQN----YKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHG 224 (397)
Q Consensus 156 -~~i~~l~~~~gi~livD~a~~~~~----~~~~~~~----~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~ 224 (397)
++|+++|++||++||+|++|+... ....+.. .+..+++.|++|.+|.+| +|+++.+++..+.+.....
T Consensus 187 l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v~~~~~i~~l~~~~~- 265 (405)
T PRK09148 187 YKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAVGNERLIAALTRVKS- 265 (405)
T ss_pred HHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcchheeeeeCCHHHHHHHHHHHH-
Confidence 678889999999999999997321 1111111 124567899999777556 7999887766555543221
Q ss_pred CCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecC----
Q psy8850 225 GGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF---- 300 (397)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 300 (397)
....+.+.....++..+++.....+++.++.++++++.+.+.|++ . ++.+..+.. +.++++.++.
T Consensus 266 ------~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~r~~l~~~L~~-~-~~~~~~p~~---g~f~~~~l~~~~~~ 334 (405)
T PRK09148 266 ------YLDYGAFTPIQVAATAALNGPQDCIAEMRELYKKRRDVLVESFGR-A-GWDIPPPAA---SMFAWAPIPEAFRH 334 (405)
T ss_pred ------HhccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH-c-CCccCCCCe---eEEEEEECCCccCC
Confidence 001122233333333455432345777888999999999999988 4 554333322 4456666653
Q ss_pred CChHHHHHHh--C-CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHHHhc
Q psy8850 301 IEGESLLMAI--K-DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKLREL 376 (397)
Q Consensus 301 ~~~~~~~~~l--~-~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~ 376 (397)
.+..++...+ . ||.+.+|..|.. ...+++||+++ .+.+++++++++|.+++.++.|.
T Consensus 335 ~~~~~~~~~ll~~~gV~v~pg~~f~~-----------------~~~~~~Ri~~~--~~~~~l~~al~~l~~~l~~~~~~ 394 (405)
T PRK09148 335 LGSLEFSKLLVEKADVAVAPGVGFGE-----------------HGDGYVRIALV--ENEQRIRQAARNIKRFLSSADET 394 (405)
T ss_pred CCHHHHHHHHHHhCCEEEeCchhhCC-----------------CCCCeEEEEec--CCHHHHHHHHHHHHHHHHHHHHH
Confidence 1345666553 2 999999975532 01378999997 47899999999999999888774
No 108
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.97 E-value=8.4e-28 Score=241.32 Aligned_cols=307 Identities=13% Similarity=0.133 Sum_probs=231.1
Q ss_pred HHHHHHHHHHHHHHHhCCCCCcEEEeCChh----HHHHHHHHHhHhhhccCCC----EEEEcCCCChhhHHHHHHHhhCC
Q psy8850 39 AEKAIEKARNEVAQLIYADPREIIWTSGAT----ESNNLAIKGAAHFYKKRGK----HIITVQTEHKSVLDSIRKLENDG 110 (397)
Q Consensus 39 ~~~~~~~~~~~la~~~~~~~~~i~~~~g~t----~a~~~~l~~l~~~~~~~g~----~vl~~~~~~~s~~~~~~~~~~~g 110 (397)
..+.+.++++.+++++|+ +.|.|+++++ +|++++++++.. .+|+ +|+++..+|+++..++... |
T Consensus 566 ~~~~~~~~r~~la~i~g~--~~v~f~pnaga~ge~a~~~vi~~~~~---~~Gd~~r~~vli~~~aH~sn~a~a~~~---G 637 (993)
T PLN02414 566 YQEMFEDLGDLLCEITGF--DSFSLQPNAGAAGEYAGLMVIRAYHL---SRGDHHRNVCIIPVSAHGTNPASAAMC---G 637 (993)
T ss_pred HHHHHHHHHHHHHHHhCC--CeEEEcCCCcHHHHHHHHHHHHHHHh---ccCCCCCCEEEeCCCcCccCHHHHHHC---C
Confidence 346888999999999999 4899999999 899999998863 3366 9999999999999998886 9
Q ss_pred cEEEEeccCCCCCCCHHHHHHHhcC---CceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCcc-ccccCc
Q psy8850 111 FRVTYLKPKNNGLITLSQLEEKICS---DTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKI-DINIQN 186 (397)
Q Consensus 111 ~~v~~v~~~~~~~~d~~~l~~~i~~---~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~-~~~~~~ 186 (397)
++++.+|++++|.+|+++|++++++ ++++|++++++|.+|...|+++|.++||++|+++++|+++..+.. ..+...
T Consensus 638 ~~vv~v~~d~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~~~l~~p~~ 717 (993)
T PLN02414 638 MKIVVVGTDAKGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQVGLTSPGF 717 (993)
T ss_pred CEEEEeccCCCCCcCHHHHHHHHhccCCCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhccCcCCccc
Confidence 9999999999999999999999984 789999999999999999999999999999999999999987773 445567
Q ss_pred ccccEEEecccc-ccCC-----CCceEEEEecCCCCcccccccc--CCcccccc---CCCCch---hHHHHHHHHHHHH-
Q psy8850 187 YKVDLMSFSAHK-IYGP-----KGIGALYIRRNPRTRIEAQIHG--GGHEYGLR---SGTLAT---HQIVGMGEAFRLA- 251 (397)
Q Consensus 187 ~~~d~~~~s~~K-~~g~-----~g~g~~~~~~~~~~~~~~~~~~--~~~~~~~~---~~~~~~---~~~~~l~~al~~~- 251 (397)
+++|++++|.|| +++| +|+|++++++++...+.....+ .....++. .|+.+. .+...+..+..++
T Consensus 718 ~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~~g~al~l~~A~~yi~ 797 (993)
T PLN02414 718 IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIPRPEKTQPLGTISAAPWGSALILPISYTYIA 797 (993)
T ss_pred cCCCEEEecCCccCCcCcccCCCCeeeEEEchhhcccCCCCccccCCCcccccCCCCcCCccchhhhhHHHHHHHHHHHH
Confidence 899999999999 7644 4599999997655444322111 11111112 345332 1223333444443
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEec------CCChHHHHHHhC--CcEecccCc
Q psy8850 252 ---RIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN------FIEGESLLMAIK--DIAVSSGSA 320 (397)
Q Consensus 252 ---~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~--~i~~~~g~~ 320 (397)
.+++++..++...++.++++.|.+ ..++.+.++.+ ...+-+.+.++ +.+..++.++|. |+....-
T Consensus 798 ~lG~~Gl~~~a~~a~~nAnYl~~rL~~-~~~~~~~~~~~-~~~hEfv~~~~~l~~~~g~~~~di~krL~d~Gihapt~-- 873 (993)
T PLN02414 798 MMGSEGLTDASKIAILNANYMAKRLEG-HYPVLFRGKNG-TCAHEFIIDLRPFKNTAGIEPEDVAKRLMDYGFHAPTM-- 873 (993)
T ss_pred HHCHhHHHHHHHHHHHHHHHHHHHHHh-hCCccccCCCC-CeeeeEEEeccccccccCCCHHHHHHHHHHcCcEEeee--
Confidence 346888899999999999999987 44544443322 11233444444 245578888876 5443221
Q ss_pred cCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHHHh
Q psy8850 321 CTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKLRE 375 (397)
Q Consensus 321 ~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 375 (397)
..+ ..+.+||+++.+.+++|+|+++++|..+..++++
T Consensus 874 ~~p------------------v~~~lmiepTE~~skeelDrf~~al~~i~~e~~~ 910 (993)
T PLN02414 874 SWP------------------VPGTLMIEPTESESKAELDRFCDALISIREEIAD 910 (993)
T ss_pred ccc------------------cCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHHH
Confidence 111 1388999999999999999999999999999987
No 109
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.97 E-value=5e-28 Score=227.89 Aligned_cols=322 Identities=14% Similarity=0.122 Sum_probs=221.2
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhC------CCCCcEEEeCChhHHHHHHHHHhHhh
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIY------ADPREIIWTSGATESNNLAIKGAAHF 81 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~------~~~~~i~~~~g~t~a~~~~l~~l~~~ 81 (397)
++++.+.+++.+.+....... . .| .......++++.++++++ +++++|++|+|+++++..++.++.
T Consensus 46 ~~~~~v~~a~~~~~~~~~~~~-~-~y----~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~-- 117 (394)
T PRK06836 46 PPPAAVKEALRELAEEEDPGL-H-GY----MPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGALNVALKAIL-- 117 (394)
T ss_pred CCCHHHHHHHHHHHhcCCcCc-c-cC----CCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHHHHHHHHHHhc--
Confidence 457889998887775421111 1 12 222346667777777764 467899999999999999999887
Q ss_pred hccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCC-CCCCHHHHHHHhcCCceEEEEecccCccccccc---HHH
Q psy8850 82 YKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNN-GLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---ILE 157 (397)
Q Consensus 82 ~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~-~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~---l~~ 157 (397)
++||.|++++++|+.+....+.. |.+++.++.+++ +.+|+++++++++++++++++++++||||.++| +++
T Consensus 118 --~~gd~Vli~~p~~~~~~~~~~~~---g~~v~~v~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~~~~~~~~ 192 (394)
T PRK06836 118 --NPGDEVIVFAPYFVEYRFYVDNH---GGKLVVVPTDTDTFQPDLDALEAAITPKTKAVIINSPNNPTGVVYSEETLKA 192 (394)
T ss_pred --CCCCEEEEcCCCCccHHHHHHHc---CCEEEEEecCCccCcCCHHHHHhhcCcCceEEEEeCCCCCCCcCCCHHHHHH
Confidence 78999999999999987766655 999999999765 679999999999999999999999999999999 466
Q ss_pred HHHHHHh------cCcEEEEecccccCcc----ccc-cCcccccEEEeccccccCCCC--ceEEEEecCCCCcccccccc
Q psy8850 158 IGELCRS------KGVIFHCDAAQAVGKI----DIN-IQNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHG 224 (397)
Q Consensus 158 i~~l~~~------~gi~livD~a~~~~~~----~~~-~~~~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~ 224 (397)
|+++|++ ||+++|+|++|..... ... ....+..+++.|++|.+|.+| +|++++++...+. ......
T Consensus 193 l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~pGlRiG~~~~~~~~~~~-~~~~~~ 271 (394)
T PRK06836 193 LAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFKYYDNSIVVYSFSKSLSLPGERIGYIAVNPEMEDA-DDLVAA 271 (394)
T ss_pred HHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHHccCcEEEEecchhhccCcceeeEEEecCHHHhhh-HHHHHH
Confidence 7788998 8999999999872211 111 122345788999999666444 7898887654221 111100
Q ss_pred CCcccccc-CCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCCh
Q psy8850 225 GGHEYGLR-SGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEG 303 (397)
Q Consensus 225 ~~~~~~~~-~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (397)
........ ....+.....++...++ +. ...+.++++++.+.+.|++ . ++.+..+.+ +..+++.++..+.
T Consensus 272 ~~~~~~~~~~~~~~~~~q~~~~~~l~---~~--~~~~~~~~~r~~l~~~L~~-~-g~~~~~~~g---g~~~~~~~~~~~~ 341 (394)
T PRK06836 272 LVFANRILGFVNAPALMQRVVAKCLD---AT--VDVSIYKRNRDLLYDGLTE-L-GFECVKPQG---AFYLFPKSPEEDD 341 (394)
T ss_pred HHHHhhccccccCCHHHHHHHHHHhC---Ch--HHHHHHHHHHHHHHHHHHh-C-CCEeecCCc---eEEEEEeCCCCCH
Confidence 00000000 00122222233223332 21 1245677788889999988 4 565554432 3455566665566
Q ss_pred HHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHHH
Q psy8850 304 ESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKLR 374 (397)
Q Consensus 304 ~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 374 (397)
.++...+. ||.+.+|..|.. .+++||+++ .++++++..+++|++++++++
T Consensus 342 ~~~~~~l~~~gv~v~~g~~f~~-------------------~~~iRi~~~--~~~~~~~~~i~~l~~~l~~~~ 393 (394)
T PRK06836 342 VAFCEKAKKHNLLLVPGSGFGC-------------------PGYFRLSYC--VDTETIERSLPAFEKLAKEYK 393 (394)
T ss_pred HHHHHHHHhCCEEEECchhcCC-------------------CCeEEEEec--CCHHHHHHHHHHHHHHHHHhc
Confidence 77776665 899999865532 278999998 479999999999999987663
No 110
>PRK07908 hypothetical protein; Provisional
Probab=99.97 E-value=5.8e-28 Score=224.10 Aligned_cols=303 Identities=17% Similarity=0.159 Sum_probs=216.9
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCC
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGK 87 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~ 87 (397)
++|+.+++++.+.+.....+|. .....++|+++++++++++++|++|+|+++|+.+++. + +++
T Consensus 35 ~~~~~~~~~~~~~~~~~~~Y~~----------~~g~~~lr~aia~~~~~~~~~I~it~Ga~~al~~~~~-l-----~~~- 97 (349)
T PRK07908 35 TPPEWLRERLAARLGDLAAYPS----------TEDERRARAAVAARHGRTPDEVLLLAGAAEGFALLAR-L-----RPR- 97 (349)
T ss_pred CCCHHHHHHHHHHhhHhhcCCC----------ccchHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHh-c-----CCC-
Confidence 4688899999988755322221 2346789999999999999999999999999998887 3 454
Q ss_pred EEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCc
Q psy8850 88 HIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGV 167 (397)
Q Consensus 88 ~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi 167 (397)
.+++..|+|..+...++.. |.+++.+|.++++.+|++.+ .++++++++++++||||.++|.++|.++|++ +.
T Consensus 98 ~viv~~P~y~~~~~~~~~~---G~~i~~v~~~~~~~~d~~~l----~~~~~~i~l~np~NPTG~~~~~~~l~~l~~~-~~ 169 (349)
T PRK07908 98 RAAVVHPSFTEPEAALRAA---GIPVHRVVLDPPFRLDPAAV----PDDADLVVIGNPTNPTSVLHPAEQLLALRRP-GR 169 (349)
T ss_pred eEEEeCCCChHHHHHHHHc---CCEEEeeccCcccCcChhHh----ccCCCEEEEcCCCCCCCCCcCHHHHHHHHhc-CC
Confidence 5666788888877666555 99999999987677888754 4578999999999999999999999999975 78
Q ss_pred EEEEeccccc--CccccccC--cccccEEEeccccccCCCC--ceEEEEecCCCCccccccccCCccccccCCCCchhHH
Q psy8850 168 IFHCDAAQAV--GKIDINIQ--NYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQI 241 (397)
Q Consensus 168 ~livD~a~~~--~~~~~~~~--~~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (397)
++|+|++|+. ...+.++. ..+..+++.|+||.+|.+| +|+++++++..+.+...... ...+....
T Consensus 170 ~iIvDe~y~~~~~~~~~~l~~~~~~~~i~i~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~~---------~~~~~~~~ 240 (349)
T PRK07908 170 ILVVDEAFADAVPGEPESLAGDDLPGVLVLRSLTKTWSLAGLRVGYALGAPDVLARLTRGRAH---------WPVGTLQL 240 (349)
T ss_pred EEEEECcchhhccCCccccccccCCCEEEEeecccccCCccceeeeeecCHHHHHHHHhcCCC---------CCccHHHH
Confidence 8999999862 11122222 1233566779999666445 69999887666655443221 12223333
Q ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCChHHHHHHhC--CcEeccc
Q psy8850 242 VGMGEAFR-LARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAIK--DIAVSSG 318 (397)
Q Consensus 242 ~~l~~al~-~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~i~~~~g 318 (397)
.++...++ ...+++++.+++++++++++.+.|++ + ++.+..+.. +.++++.+++ ...+...++ +|.+.+|
T Consensus 241 ~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~-~-~~~~~~p~~---g~~~~~~~~~--~~~~~~~l~~~gI~v~~g 313 (349)
T PRK07908 241 EAIAACCAPRAVAEAAADAARLAADRAEMVAGLRA-V-GARVVDPAA---APFVLVRVPD--AELLRKRLRERGIAVRRG 313 (349)
T ss_pred HHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHh-C-CcEeccCCC---ceEEEEECCc--HHHHHHHHHhCCEEEEEC
Confidence 33333333 12235677888999999999999998 5 666665433 5566777664 456666665 8999998
Q ss_pred CccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHH
Q psy8850 319 SACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVK 371 (397)
Q Consensus 319 ~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 371 (397)
..|.. ...++|||++. +++++++++++|++++.
T Consensus 314 ~~f~~-----------------~~~~~vRis~~---~~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 314 DTFPG-----------------LDPDYLRLAVR---PRAEVPVLVQALAEILK 346 (349)
T ss_pred CCCCC-----------------CCCCeEEEEeC---CCccHHHHHHHHHHHHh
Confidence 75532 01389999996 68899999999988754
No 111
>PRK09265 aminotransferase AlaT; Validated
Probab=99.97 E-value=4.2e-28 Score=229.30 Aligned_cols=323 Identities=14% Similarity=0.111 Sum_probs=218.8
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHh------CCCCCcEEEeCChhHHHHHHHHHhHhh
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLI------YADPREIIWTSGATESNNLAIKGAAHF 81 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~------~~~~~~i~~~~g~t~a~~~~l~~l~~~ 81 (397)
++++.+.+++.+.+.... .| .......++++++++++ ++++++|++++|+++++.+++.++.
T Consensus 49 ~~~~~i~~~~~~~~~~~~------~Y----~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~~l~~~~~~~~-- 116 (404)
T PRK09265 49 EAPDEILRDVIRNLPTAQ------GY----SDSKGLFSARKAIMQYYQQKGIPDVDVDDIYIGNGVSELIVMAMQALL-- 116 (404)
T ss_pred CCCHHHHHHHHHHhhcCC------CC----CCCCCcHHHHHHHHHHHhccCCCCCCcccEEEeCChHHHHHHHHHHhC--
Confidence 367888888877654321 11 11234567888888887 6788899999999999999999887
Q ss_pred hccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCC--CCCCCHHHHHHHhcCCceEEEEecccCccccccc---HH
Q psy8850 82 YKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN--NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---IL 156 (397)
Q Consensus 82 ~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~---l~ 156 (397)
++||+|++++|+|+.+...+... |.+++.++++. ++.+|++++++++.++++++++++|+||||.++| ++
T Consensus 117 --~~gd~Vlv~~p~y~~~~~~~~~~---g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPtG~~~~~~~~~ 191 (404)
T PRK09265 117 --NNGDEVLVPAPDYPLWTAAVSLS---GGKPVHYLCDEEAGWFPDLDDIRSKITPRTKAIVIINPNNPTGAVYSKELLE 191 (404)
T ss_pred --CCCCEEEEeCCCCcChHHHHHHc---CCEEEEEecccccCCCCCHHHHHHhccccceEEEEECCCCCCCcCCCHHHHH
Confidence 78999999999999988877765 88888888763 4568999999999889999999999999999999 78
Q ss_pred HHHHHHHhcCcEEEEecccccCc----cccccCcc---cccEEEeccccccCCCC--ceEEEEecCC--CCccccccccC
Q psy8850 157 EIGELCRSKGVIFHCDAAQAVGK----IDINIQNY---KVDLMSFSAHKIYGPKG--IGALYIRRNP--RTRIEAQIHGG 225 (397)
Q Consensus 157 ~i~~l~~~~gi~livD~a~~~~~----~~~~~~~~---~~d~~~~s~~K~~g~~g--~g~~~~~~~~--~~~~~~~~~~~ 225 (397)
+|+++|+++|++||+|++|.... ....+..+ ...+++.|++|.+|.+| +|+++.+... ...+...+...
T Consensus 192 ~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~ 271 (404)
T PRK09265 192 EIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRVGWMVLSGPKKHAKGYIEGLDML 271 (404)
T ss_pred HHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchhhccCcccceEEEEEeCchHHHHHHHHHHHHH
Confidence 89999999999999999986221 11111111 13466789999765545 6888874211 11111100000
Q ss_pred CccccccCCCCchhHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCC--
Q psy8850 226 GHEYGLRSGTLATHQIVGMGEAFRLAR--IEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFI-- 301 (397)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~l~~al~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 301 (397)
.... ...+.....++.+++.... ..+.+..+++.++++++.+.|++ ++++.+..+.+ +..+++.++..
T Consensus 272 ---~~~~-~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~-~~~~~~~~p~~---g~~l~~~~~~~~~ 343 (404)
T PRK09265 272 ---ASMR-LCANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAWELLNA-IPGVSCVKPKG---ALYAFPKLDPKVY 343 (404)
T ss_pred ---hccc-cCCCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhc-CCCCcccCCCc---ceEEEEEeccccc
Confidence 0001 1233334444445553211 11112234567778889999987 77766554433 44566666531
Q ss_pred ---ChHH-HHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHHH
Q psy8850 302 ---EGES-LLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKLR 374 (397)
Q Consensus 302 ---~~~~-~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 374 (397)
+..+ +...+. ||.+.+|..|.. ...+++|+++. .+.+++++++++|.++++..+
T Consensus 344 ~~~~~~~~~~~~l~~~gv~v~pg~~F~~-----------------~~~~~~Ri~~~--~~~e~l~~~l~rl~~~l~~~~ 403 (404)
T PRK09265 344 PIHDDEQFVLDLLLQEKVLLVQGTGFNW-----------------PEPDHFRIVTL--PRVDDLEEAIGRIGRFLSGYR 403 (404)
T ss_pred CCCCHHHHHHHHHHhCCEEEECchhhCC-----------------CCCCeEEEEeC--CCHHHHHHHHHHHHHHHHHhc
Confidence 2333 444444 899999876532 01378999996 579999999999999887543
No 112
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.97 E-value=1.2e-27 Score=218.44 Aligned_cols=309 Identities=19% Similarity=0.194 Sum_probs=238.9
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhC-CCCCcEEEeCChhHHHHHHHHHhHhhhccCC
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIY-ADPREIIWTSGATESNNLAIKGAAHFYKKRG 86 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~-~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g 86 (397)
++|+.+++++.+.+.....+|+. ...++++.++++++ .++++|++++|+++.+..+++++. .+|
T Consensus 35 gp~~~~~~~~~~~~~~~~rYPd~-----------~~~~l~~a~a~~~~~~~~~~V~~gnGsde~i~~l~~~~~----~~g 99 (356)
T COG0079 35 GPPPKVIEAIRAALDKLNRYPDP-----------DYRELRAALAEYYGVVDPENVLVGNGSDELIELLVRAFV----EPG 99 (356)
T ss_pred CCCHHHHHHHHHHHHhhccCCCC-----------cHHHHHHHHHHHhCCCCcceEEEcCChHHHHHHHHHHhh----cCC
Confidence 46789999998888754434433 46789999999999 788899999999999999999998 799
Q ss_pred CEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhc-
Q psy8850 87 KHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSK- 165 (397)
Q Consensus 87 ~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~- 165 (397)
|.|+++.|+|..+...++.. |.+++.+|.++ +.+|++.+.+.+.+++++|++++|+||||...+.++|.+++...
T Consensus 100 d~vl~~~Ptf~~Y~~~a~~~---g~~~~~v~~~~-~~~d~~~~~~~~~~~~~lv~i~nPNNPTG~~~~~~~l~~l~~~~~ 175 (356)
T COG0079 100 DTVLIPEPTFSMYEIAAQLA---GAEVVKVPLKE-FRLDLDAILAAIRDKTKLVFLCNPNNPTGTLLPREELRALLEALP 175 (356)
T ss_pred CEEEEcCCChHHHHHHHHhc---CCeEEEecccc-cccCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC
Confidence 99999999999999888887 99999999988 88999999999999999999999999999999988887777754
Q ss_pred -CcEEEEecccccCccc--cccC-cccccEEEeccccccCCCC--ceEEEEecCCCCccccccccCCccccccCCCCchh
Q psy8850 166 -GVIFHCDAAQAVGKID--INIQ-NYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATH 239 (397)
Q Consensus 166 -gi~livD~a~~~~~~~--~~~~-~~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (397)
+.+|++|++|.-...+ ..+. ..+.-+++-|++|.+|..| +|+++.+++.++.+......| ..+..
T Consensus 176 ~~~~vVvDEAY~eF~~~~~~~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~~~~i~~l~~vr~p~---------~v~~~ 246 (356)
T COG0079 176 EGGLVVIDEAYIEFSPESSLELLKYPPNLIVLRTFSKAFGLAGLRVGYAIANPELIAALNKVRPPF---------NVSSP 246 (356)
T ss_pred CCcEEEEeCchhhcCCchhhhhccCCCCEEEEEecHHhhhcchhceeeccCCHHHHHHHHHhcCCC---------CCCHH
Confidence 8899999999722211 1111 2234688889999887666 788888888777776654332 34445
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEE-EeCCCCCCCCceEEEEecCCChHHHHHHhC--CcEec
Q psy8850 240 QIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIY-INGDMNNRIPHNLNISFNFIEGESLLMAIK--DIAVS 316 (397)
Q Consensus 240 ~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~i~~~ 316 (397)
...+..++++.- +.+++..+++.+.++++.+.|++ ++ +. +.... .+++.+.++......+.+.|. ||.++
T Consensus 247 a~~aa~aal~~~-~~~~~~~~~~~~~r~rl~~~l~~-~~-~~~v~pS~----aNFvlv~~~~~~~~~l~~~L~~~giivR 319 (356)
T COG0079 247 ALAAAIAALRDA-DYLEESVERIREERERLYAALKA-LG-LFGVFPSQ----ANFVLVRVPDAEAAALAEALLKKGILVR 319 (356)
T ss_pred HHHHHHHHcccH-HHHHHHHHHHHHHHHHHHHHHHh-CC-CCeecCCC----CcEEEEECCCccHHHHHHHHHHCCEEEE
Confidence 555554555543 57888999999999999999999 65 33 44332 566677776422446777775 88888
Q ss_pred ccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHH
Q psy8850 317 SGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKK 372 (397)
Q Consensus 317 ~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 372 (397)
.-.. . ....+++||+++ ++++.++++++|.+++..
T Consensus 320 ~~~~-~-----------------~~~~~~lRitvg---t~een~~ll~AL~~~~~~ 354 (356)
T COG0079 320 DCSS-V-----------------GLLPGYLRITVG---TPEENDRLLAALREVLKG 354 (356)
T ss_pred eCCC-C-----------------CCCCCeEEEEeC---CHHHHHHHHHHHHHHHhc
Confidence 6422 1 112379999998 688889999999988754
No 113
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.97 E-value=4.8e-28 Score=229.27 Aligned_cols=336 Identities=18% Similarity=0.199 Sum_probs=232.8
Q ss_pred CCCCCCCCHHHHHHHHHHHhhcc--CCCCCCCcchhhhHHHHHHH-HHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhH
Q psy8850 3 YSATTPIDPRVVDKMIPYLRVQF--GNPASRNHIYGWTAEKAIEK-ARNEVAQLIYADPREIIWTSGATESNNLAIKGAA 79 (397)
Q Consensus 3 ~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~ 79 (397)
.++.+++++.|++++.+.+...+ ++|.. .+..+....+.+.+ .++.+++++|++...++++ ||++|+..++.++.
T Consensus 25 ~~~~~~~~~~v~~a~~~~~~~~~~~g~~~~-~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~v~~~-sgt~a~~~~l~~l~ 102 (402)
T cd00378 25 IASENFTSPAVMEAMGSDLTNKYAEGYPGK-RYYGGCEYVDEIEDLAIERAKKLFGAEYANVQPH-SGSQANLAVYFALL 102 (402)
T ss_pred eccCCcCCHHHHHHhcccccccccCCCCCC-cccCCchHHHHHHHHHHHHHHHHhCCCceeeecC-CcHHHHHHHHHHhc
Confidence 46777889999999988775433 55555 33333333344444 6778899999986555554 67899999999987
Q ss_pred hhhccCCCEEEEcCCCChhhHHHHHH--HhhCCcEEEEeccCC---CCCCCHHHHHHHhc-CCceEEEEecccCcccccc
Q psy8850 80 HFYKKRGKHIITVQTEHKSVLDSIRK--LENDGFRVTYLKPKN---NGLITLSQLEEKIC-SDTILVSVMLVNNEIGVIQ 153 (397)
Q Consensus 80 ~~~~~~g~~vl~~~~~~~s~~~~~~~--~~~~g~~v~~v~~~~---~~~~d~~~l~~~i~-~~~~~v~~~~~~~~tG~~~ 153 (397)
++||+|++++++|+++...... +...|.++..++.+. ++.+|++++++++. ++++++++++++| |...
T Consensus 103 ----~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~~~~~~v~~~~~~~--~~~~ 176 (402)
T cd00378 103 ----EPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALEFKPKLIVAGASAY--PRPI 176 (402)
T ss_pred ----CCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHhCCCCEEEecCccc--CCCc
Confidence 7999999999999877654322 223377777776642 68899999999985 5899998887765 4677
Q ss_pred cHHHHHHHHHhcCcEEEEecccccCcc-----ccccCcccccEEEecccc-ccCCCCceEEEEec-CCCCccccccccCC
Q psy8850 154 PILEIGELCRSKGVIFHCDAAQAVGKI-----DINIQNYKVDLMSFSAHK-IYGPKGIGALYIRR-NPRTRIEAQIHGGG 226 (397)
Q Consensus 154 ~l~~i~~l~~~~gi~livD~a~~~~~~-----~~~~~~~~~d~~~~s~~K-~~g~~g~g~~~~~~-~~~~~~~~~~~~~~ 226 (397)
|+++|+++|++||+++|+|++|+.+.. +..+. ++|+++.|+|| +.|+.| |+++.++ +..+.+......
T Consensus 177 ~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~--~~dv~~~s~sK~l~G~~g-g~i~~~~~~~~~~l~~~~~~-- 251 (402)
T cd00378 177 DFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP--GADVVTTTTHKTLRGPRG-GLILTRKGELAKKINSAVFP-- 251 (402)
T ss_pred CHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc--CCcEEEeccccCCCCCCc-eEEEeccHHHHHHHHHHhCc--
Confidence 999999999999999999999865432 22233 57999999999 657765 7777765 554444332211
Q ss_pred ccccccCCCCchhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecC--CCh
Q psy8850 227 HEYGLRSGTLATHQIVGMGEAFRLARI-EMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF--IEG 303 (397)
Q Consensus 227 ~~~~~~~~~~~~~~~~~l~~al~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 303 (397)
...+++....+.++..++..... +++++.+++.++++++.+.|.+ + ++.+...+. ..+++++.++. .+.
T Consensus 252 ----~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~--~~~~v~v~~~~~~~~~ 323 (402)
T cd00378 252 ----GLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKE-R-GFKVVSGGT--DNHLVLVDLRPKGITG 323 (402)
T ss_pred ----cccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHh-C-CCeEeecCC--CCeEEEEeCCccCCCH
Confidence 11234445566666666665544 6778889999999999999998 4 776653222 15666777752 344
Q ss_pred HHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCC----CCHHHHHHHHHHHHHHHHH
Q psy8850 304 ESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRF----TTEKEIDFTIKLLKMKVKK 372 (397)
Q Consensus 304 ~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~----~~~~~i~~~~~~l~~~~~~ 372 (397)
..+.+.|. ||.+.++.. |... ........+|+++... .+.+||+++++.|++++.+
T Consensus 324 ~~~~~~l~~~gI~v~~~~~--p~~~-----------~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~~~ 385 (402)
T cd00378 324 KAAEDALEEAGITVNKNTL--PWDP-----------SSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARALKD 385 (402)
T ss_pred HHHHHHHHHcCcEEcCCcC--CCCC-----------CCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHHhc
Confidence 55555555 888876432 2110 0012347899998753 3699999999999987743
No 114
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.97 E-value=5.9e-28 Score=231.45 Aligned_cols=296 Identities=14% Similarity=0.183 Sum_probs=206.8
Q ss_pred HHHHHHHHHHHHhC--------CCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHH-HHhhCCcE
Q psy8850 42 AIEKARNEVAQLIY--------ADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIR-KLENDGFR 112 (397)
Q Consensus 42 ~~~~~~~~la~~~~--------~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~-~~~~~g~~ 112 (397)
+..+++++++++++ +++++|++|+|+++|+.+++.+++ ++||.|+++.|+|+.+...+. .. |.+
T Consensus 95 G~~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l~----~pGD~Vlv~~P~Y~~~~~~~~~~~---G~~ 167 (496)
T PLN02376 95 GLKKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLA----DPGDVFLIPSPYYAAFDRDLRWRT---GVE 167 (496)
T ss_pred CcHHHHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHhC----CCCCEEEECCCCccchHHHHHhhC---CCE
Confidence 44556666666654 678899999999999999999998 899999999999999987665 24 999
Q ss_pred EEEeccC--CCCCCCHHHHHHHh------cCCceEEEEecccCccccccc---HHHHHHHHHhcCcEEEEecccccCcc-
Q psy8850 113 VTYLKPK--NNGLITLSQLEEKI------CSDTILVSVMLVNNEIGVIQP---ILEIGELCRSKGVIFHCDAAQAVGKI- 180 (397)
Q Consensus 113 v~~v~~~--~~~~~d~~~l~~~i------~~~~~~v~~~~~~~~tG~~~~---l~~i~~l~~~~gi~livD~a~~~~~~- 180 (397)
++.+|++ +++.+|++++++++ ..+++++++++|+||||.+++ +++|+++|++||++||+|++|+....
T Consensus 168 vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~ 247 (496)
T PLN02376 168 IIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFA 247 (496)
T ss_pred EEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccC
Confidence 9999996 34678999998653 247899999999999999999 56688899999999999999983211
Q ss_pred ---ccccCcc-----------cccEEEeccccccCCCC--ceEEEEecCCCCccccccccCCccccccCCCCchhHHHHH
Q psy8850 181 ---DINIQNY-----------KVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGM 244 (397)
Q Consensus 181 ---~~~~~~~-----------~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 244 (397)
...+..+ +..+++.|++|.+|.+| +|+++..++........... .+..+.....++
T Consensus 248 ~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~~l~~~~~~~~~--------~~~vs~~~Q~a~ 319 (496)
T PLN02376 248 GGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSVVSCARKMSS--------FGLVSSQTQLML 319 (496)
T ss_pred CCCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECCHHHHHHHHHHhh--------cCCCCHHHHHHH
Confidence 1111100 12245789999666445 78888854332221111110 112333334444
Q ss_pred HHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCC-C-------hHHHHHHhC--
Q psy8850 245 GEAFR---LARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFI-E-------GESLLMAIK-- 311 (397)
Q Consensus 245 ~~al~---~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------~~~~~~~l~-- 311 (397)
...++ ++...+.+.++++.++++.+.+.|++ .++.+..+.. +.++++.++.. . ..++.+.+.
T Consensus 320 ~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~--~gi~~~~~~a---G~flwi~l~~~~~~~~~~~~e~~l~~~ll~~ 394 (496)
T PLN02376 320 ASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKK--ADIACLTSNA---GLFAWMDLRHLLRDRNSFESEIELWHIIIDK 394 (496)
T ss_pred HHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCcccCCCc---eEEEEEEchhhhccCCchhHHHHHHHHHHHc
Confidence 44443 22334666788888999999999988 3665554432 45667776531 1 134555442
Q ss_pred -CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHHHh
Q psy8850 312 -DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKLRE 375 (397)
Q Consensus 312 -~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 375 (397)
+|.+.+|..|... .++++||+++. .++++++..+++|++++.+.++
T Consensus 395 ~gV~v~pGs~F~~~-----------------~~g~~Ri~fa~-~~~~~l~~al~rl~~~l~~~~~ 441 (496)
T PLN02376 395 VKLNVSPGSSFRCT-----------------EPGWFRICFAN-MDDDTLHVALGRIQDFVSKNKN 441 (496)
T ss_pred CCEEEeCccccCCC-----------------CCCEEEEEeeC-CCHHHHHHHHHHHHHHHHHhhh
Confidence 8999999766430 13799999986 4689999999999999976554
No 115
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.97 E-value=7.5e-28 Score=225.14 Aligned_cols=308 Identities=16% Similarity=0.112 Sum_probs=212.6
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhC--------CCCCcEEEeCChhHHHHHHHHHhH
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIY--------ADPREIIWTSGATESNNLAIKGAA 79 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~--------~~~~~i~~~~g~t~a~~~~l~~l~ 79 (397)
++|+.+++++.+.+..... .. .|. .....++|++++++++ +++++|++|+|+++++..++.++.
T Consensus 41 ~~~~~~~~~~~~~~~~~~~--~~-~Y~-----~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~al~~~~~~~~ 112 (374)
T PRK02610 41 DLPPDLKQKLAWLYQQGIE--SN-RYP-----DGGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDELIRSLLIATC 112 (374)
T ss_pred CCCHHHHHHHHHHHhhccc--cc-CCC-----CCchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHHHHHHHHHHc
Confidence 5688999999887654110 00 111 1246778889998887 778899999999999998877766
Q ss_pred hhhccCCC-EEEEcCCCChhhHHHHHHHhhCCcEEEEeccCC-CCCCCHHHHHHHhc----CCceEEEEecccCcccccc
Q psy8850 80 HFYKKRGK-HIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN-NGLITLSQLEEKIC----SDTILVSVMLVNNEIGVIQ 153 (397)
Q Consensus 80 ~~~~~~g~-~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~-~~~~d~~~l~~~i~----~~~~~v~~~~~~~~tG~~~ 153 (397)
.+++ +|++..|+|+.+...++.. |.+++.++.++ ++.+|+++++++++ +++++|++++|+||||.++
T Consensus 113 ----~~g~~~Vlv~~P~y~~~~~~~~~~---g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG~~~ 185 (374)
T PRK02610 113 ----LGGEGSILVAEPTFSMYGILAQTL---GIPVVRVGRDPETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTGNPL 185 (374)
T ss_pred ----CCCCCeEEEcCCChHHHHHHHHHc---CCEEEEecCCcccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCCCCCC
Confidence 4665 8999999999998888777 99999999875 46799999999886 4799999999999999999
Q ss_pred cHHHHHHHHH-hcCcEEEEecccccCcc--c-cccCcccccEEEeccccccCCCC--ceEEEEecCCCCccccccccCCc
Q psy8850 154 PILEIGELCR-SKGVIFHCDAAQAVGKI--D-INIQNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGH 227 (397)
Q Consensus 154 ~l~~i~~l~~-~~gi~livD~a~~~~~~--~-~~~~~~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~ 227 (397)
+.+++.++++ .+|++||+|++|.-... . ..+......+++.|++|.+|.+| +|+++.+++..+.+......
T Consensus 186 s~~~l~~l~~~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~ivi~SfSK~~g~~GlRiG~~v~~~~l~~~l~~~~~~--- 262 (374)
T PRK02610 186 TAAELEWLRSLPEDILVVIDEAYFEFSQTTLVGELAQHPNWVILRTFSKAFRLAAHRVGYAIGHPELIAVLEKVRLP--- 262 (374)
T ss_pred CHHHHHHHHhccCCcEEEEeccccccCccchHHHHhcCCCEEEEEecchhccCcccceeeeecCHHHHHHHHHhcCC---
Confidence 9766655543 14899999999973211 1 11222233577899999666545 79998876655555433211
Q ss_pred cccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecC-CChHHH
Q psy8850 228 EYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF-IEGESL 306 (397)
Q Consensus 228 ~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 306 (397)
. ..+.....+...+++......+.+.+. .+.++.+.+.|++ ++++.+. +.. +.++++.++. .+..++
T Consensus 263 -----~-~~~~~~q~a~~~~l~~~~~~~~~~~~~-~~~r~~l~~~L~~-~~~~~~~-p~~---g~f~~~~l~~~~~~~~~ 330 (374)
T PRK02610 263 -----Y-NLPSFSQLAAQLALEHRQELLAAIPEI-LQERDRLYQALQE-LPQLRVW-PSA---ANFLYLRLSQDAALAAL 330 (374)
T ss_pred -----C-CCCHHHHHHHHHHhcCHHHHHHHHHHH-HHHHHHHHHHHHh-CCCcEeC-CCc---ceEEEEeCCCCCCHHHH
Confidence 1 123333334445555433333433433 4447778888887 7776543 222 4466777764 356777
Q ss_pred HHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHH
Q psy8850 307 LMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKK 372 (397)
Q Consensus 307 ~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 372 (397)
.+.+. ||.+.++ .+++||+++ +.+++++++++|++++..
T Consensus 331 ~~~l~~~gi~v~~~------------------------~~~lRls~~---~~~~~~~~l~~l~~~l~~ 371 (374)
T PRK02610 331 HQALKAQGTLVRHT------------------------GGGLRITIG---TPEENQRTLERLQAALTQ 371 (374)
T ss_pred HHHHHHCCEEEEeC------------------------CCeEEEeCC---CHHHHHHHHHHHHHHHhh
Confidence 77765 7777532 278999997 367889999999887653
No 116
>PLN02822 serine palmitoyltransferase
Probab=99.97 E-value=1.6e-27 Score=227.80 Aligned_cols=324 Identities=14% Similarity=0.108 Sum_probs=230.3
Q ss_pred CCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCE
Q psy8850 9 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKH 88 (397)
Q Consensus 9 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~ 88 (397)
.++++++++.+++..+..... .....+...+...++++.|+++++.+ +.|++++|++ ++..++.++. +++|.
T Consensus 124 ~~~~i~ea~~~al~~~G~g~~--g~r~~yg~~~~~~~Lee~La~~~~~~-~~i~~s~G~~-a~~sai~a~~----~~gd~ 195 (481)
T PLN02822 124 GNEKIKESCTSALEKYGVGSC--GPRGFYGTIDVHLDCETKIAKFLGTP-DSILYSYGLS-TIFSVIPAFC----KKGDI 195 (481)
T ss_pred CCHHHHHHHHHHHHHhCCCCc--ccCccccCHHHHHHHHHHHHHHhCCC-CEEEECCHHH-HHHHHHHHhC----CCCCE
Confidence 589999999999987432111 11122345678999999999999976 5788888776 6788888777 89999
Q ss_pred EEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhc---------CCc-eEEEEecccCcccccccHHHH
Q psy8850 89 IITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKIC---------SDT-ILVSVMLVNNEIGVIQPILEI 158 (397)
Q Consensus 89 vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~---------~~~-~~v~~~~~~~~tG~~~~l~~i 158 (397)
|++....|.++..++... +.+++.++.+ |.++++..+. +++ ++|+++.+++++|.+.|+++|
T Consensus 196 Ii~d~~~H~s~~~~~~ls---~~~~~~~~~n-----d~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~L~~i 267 (481)
T PLN02822 196 IVADEGVHWGIQNGLYLS---RSTIVYFKHN-----DMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAPLDEI 267 (481)
T ss_pred EEEeCCccHHHHHHHHHc---CCeEEEECCC-----CHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccCHHHH
Confidence 999999998887777666 7888988876 4444444332 234 799999999999999999999
Q ss_pred HHHHHhcCcEEEEecccccCccc---------cccCcccccEEEeccccccCCCCceEEEEecCCCCccccccccCCccc
Q psy8850 159 GELCRSKGVIFHCDAAQAVGKID---------INIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGHEY 229 (397)
Q Consensus 159 ~~l~~~~gi~livD~a~~~~~~~---------~~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~ 229 (397)
+++|++||+++|+|++|++|... +++....+|+++.|++|.+|..| |+++++++..+.+.....+ .
T Consensus 268 ~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg~~G-G~i~g~~~ii~~~~~~~~~----~ 342 (481)
T PLN02822 268 VRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALATEG-GFCTGSARVVDHQRLSSSG----Y 342 (481)
T ss_pred HHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhhhCC-eEEEcCHHHHHHHHhcCCc----e
Confidence 99999999999999999955432 12211257999999999777766 8999887665554432211 1
Q ss_pred cccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCC------C-
Q psy8850 230 GLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFI------E- 302 (397)
Q Consensus 230 ~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~- 302 (397)
.|..+.++..+ .+..++++.+.+ .++..++++++++++++.|++ .+++.+..+.. ..++.+.+++. +
T Consensus 343 ~fsa~lPp~~~-~Aa~~aL~~l~~-~~~~~~~l~~~~~~l~~~L~~-~~g~~~~~~~~---spi~~l~l~~~~~~~~~~~ 416 (481)
T PLN02822 343 VFSASLPPYLA-SAAITAIDVLED-NPSVLAKLKENIALLHKGLSD-IPGLSIGSNTL---SPIVFLHLEKSTGSAKEDL 416 (481)
T ss_pred eeccccCHHHH-HHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHh-cCCcccCCCCC---CCEEEEEeCCCcccccchH
Confidence 22222233333 333367776543 367889999999999999998 66776654333 45666666532 1
Q ss_pred --hHHHHHHhC---CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHH
Q psy8850 303 --GESLLMAIK---DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 303 --~~~~~~~l~---~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 373 (397)
..++.+.|. ||.+.++..... .....+..+|++++..++++||++++++|++++..+
T Consensus 417 ~~~~~~~~~Ll~e~GV~v~~~~~~~~--------------~~~~~~~~lRi~is~~~t~edI~~~~~~l~~~~~~~ 478 (481)
T PLN02822 417 SLLEHIADRMLKEDSVLVVVSKRSTL--------------DKCRLPVGIRLFVSAGHTESDILKASESLKRVAASV 478 (481)
T ss_pred HHHHHHHHHHHhcCCEEEEeeCCCCc--------------CCCCCCCcEEEEECCCCCHHHHHHHHHHHHHHHHHH
Confidence 245666653 788887632111 011112579999998899999999999999988765
No 117
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.97 E-value=8.2e-28 Score=224.43 Aligned_cols=320 Identities=17% Similarity=0.184 Sum_probs=214.5
Q ss_pred CCCCCCCCCHHHHHHHHHHHhhccCCCCCCCcchhhh----HHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHH
Q psy8850 2 DYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWT----AEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKG 77 (397)
Q Consensus 2 ~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~ 77 (397)
|++..++..+++.+++.++.... |+++.+..+.. ..+.+.++++.++++++.+. .+++++ |+.|+..++..
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~---p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~~-~l~~~s-G~~a~~~~~~~ 90 (370)
T PRK05937 16 GFSRSDTLVHEVEKRYRLYCRQF---PHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAPE-AFIVPS-GYMANLGLCAH 90 (370)
T ss_pred CCCCCHHHHHHHHHHHHHhcccc---CCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCCe-EEEECC-hHHHHHHHHHH
Confidence 44444444445555544443221 32212333333 66789999999999999963 355544 55666555554
Q ss_pred hHhhhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhc------CCceEEEEecccCcccc
Q psy8850 78 AAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKIC------SDTILVSVMLVNNEIGV 151 (397)
Q Consensus 78 l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~------~~~~~v~~~~~~~~tG~ 151 (397)
+. ++++.|+++..+|.+...++.... +..+ .++ .+|+++++++++ +++.+|++++++|++|.
T Consensus 91 ~~----~~~d~ii~d~~~H~sv~~~~~~~~--~~~~-~~~-----~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~G~ 158 (370)
T PRK05937 91 LS----SVTDYVLWDEQVHISVVYSLSVIS--GWHQ-SFR-----HNDLDHLESLLESCRQRSFGRIFIFVCSVYSFKGT 158 (370)
T ss_pred hC----CCCCEEEEEhhhhHHHHHHHHHcC--CceE-Eec-----CCCHHHHHHHHHhhhccCCCcEEEEEecCCCCCCC
Confidence 43 678999999999999999887652 3333 233 358999999886 34668889999999999
Q ss_pred cccHHHHHHHHHhcCcEEEEecccccCccccccC----cc---cccEEEeccccccCCCCceEEEEecCCCCcccccccc
Q psy8850 152 IQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQ----NY---KVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHG 224 (397)
Q Consensus 152 ~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~----~~---~~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~~~~~~~ 224 (397)
+.|+++|.++|+++|+++++|++|+.|..+.+.. .+ +.++++.|++|.+|+.|.|+++.+ +....+.....
T Consensus 159 i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~g~~G~~vl~~~-~~~~~~~~~~~- 236 (370)
T PRK05937 159 LAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKALGSMGAALLSSS-EVKQDLMLNSP- 236 (370)
T ss_pred ccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhhhcCceEEEcCH-HHHHHHHHhCC-
Confidence 9999999999999999999999999887665542 11 234667888898888887766543 22222111100
Q ss_pred CCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCChH
Q psy8850 225 GGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGE 304 (397)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (397)
...+.. +.+...++++.++++.+.+......+++.++++++.+.|.. .. . .....+.++..+..
T Consensus 237 ---~~~~s~-~~~~~~~~a~~aal~~l~~~~~~~~~~l~~l~~~l~~~l~~-~~------~-----~~~~~i~~~~~~~~ 300 (370)
T PRK05937 237 ---PLRYST-GLPPHLLISIQVAYDFLSQEGELARKQLFRLKEYFAQKFSS-AA------P-----GCVQPIFLPGISEQ 300 (370)
T ss_pred ---CCeecC-CCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCC-CC------C-----CCEEEEEeCChhHH
Confidence 112223 35556788888999988654355677888888888877754 11 0 11223455555556
Q ss_pred HHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHHHhc
Q psy8850 305 SLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKLREL 376 (397)
Q Consensus 305 ~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~ 376 (397)
.+...|. ||.+.. .|.+ ..+.||++++.++|++|||++++.|+++++++.+.
T Consensus 301 ~~~~~L~~~gi~v~~--~~~~------------------~~~~iRis~~~~~t~edid~l~~~L~~~~~~~~~~ 354 (370)
T PRK05937 301 ELYSKLVETGIRVGV--VCFP------------------TGPFLRVNLHAFNTEDEVDILVSVLATYLEKYQKN 354 (370)
T ss_pred HHHHHHHHCCeeEEe--eCCC------------------CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHhCCC
Confidence 6777765 776652 2322 12689999999999999999999999998877653
No 118
>KOG2862|consensus
Probab=99.97 E-value=3.2e-27 Score=199.75 Aligned_cols=333 Identities=14% Similarity=0.174 Sum_probs=259.1
Q ss_pred CCCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCC-cEEEeCChhHHHHHHHHHhHhhhc
Q psy8850 5 ATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPR-EIIWTSGATESNNLAIKGAAHFYK 83 (397)
Q Consensus 5 ~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~-~i~~~~g~t~a~~~~l~~l~~~~~ 83 (397)
+++.+|+.|++++..... -.+.+...++..++.+-++..|..... ..++..+|+.|++.++..+.
T Consensus 24 GPsnl~~~V~~A~~~~~l----------gh~sPe~~qIm~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~N~l---- 89 (385)
T KOG2862|consen 24 GPSNLSGRVQEAMSRPSL----------GHMSPEFVQIMDEVLEGIKYVFKTANAQTFVISGSGHSGWEAALVNLL---- 89 (385)
T ss_pred CCcCCCHHHHHhhcCCcc----------ccCCHHHHHHHHHHHHHHHHHhccCCCceEEEecCCcchHHHHHHhhc----
Confidence 344456666666544332 223467788999999999999997533 48888899999999999998
Q ss_pred cCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcC-CceEEEEecccCccccccc-HHHHHHH
Q psy8850 84 KRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS-DTILVSVMLVNNEIGVIQP-ILEIGEL 161 (397)
Q Consensus 84 ~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~~~tG~~~~-l~~i~~l 161 (397)
.|||.|++....-.+.. +.....+.|++|..++.+......++++++++.+ ++++|++++..+.||++.| ++...++
T Consensus 90 ePgd~vLv~~~G~wg~r-a~D~~~r~ga~V~~v~~~~G~~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~~~~~~g~l 168 (385)
T KOG2862|consen 90 EPGDNVLVVSTGTWGQR-AADCARRYGAEVDVVEADIGQAVPLEEITEKLSQHKPKAVFVTHGDSSTGVLQDLLAISGEL 168 (385)
T ss_pred CCCCeEEEEEechHHHH-HHHHHHhhCceeeEEecCcccCccHHHHHHHHHhcCCceEEEEecCccccccchHHHHHHHH
Confidence 89999998776555543 3455566799999999888888999999999976 6899999999999999999 6788999
Q ss_pred HHhcCcEEEEecccccCccccccCcccccEEEecccc-ccCCCCceEEEEecCCCCccccc-------cccC--------
Q psy8850 162 CRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEAQ-------IHGG-------- 225 (397)
Q Consensus 162 ~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~~s~~K-~~g~~g~g~~~~~~~~~~~~~~~-------~~~~-------- 225 (397)
||+|+++++||.+.+.|..++.++++++|+.....+| +.+|.|.+++..+++..+.++.. ++++
T Consensus 169 c~k~~~lllVD~VaSlggt~F~mDewgVDvaytgSQKaL~aP~GLsiisfS~ka~~~~~~rK~~~~~~yFd~~~~~~~wg 248 (385)
T KOG2862|consen 169 CHKHEALLLVDTVASLGGTEFEMDEWGVDVAYTGSQKALGAPAGLSIISFSDKALEAIRDRKTKPVSFYFDILRLGNFWG 248 (385)
T ss_pred hhcCCeEEEEechhhcCCccceehhhcccEEEecchhhcCCCCCcceeecCHHHHHHHhhccCCceEEEEeHHhhcchhc
Confidence 9999999999999999999999999999999999999 78899999988887765554221 1111
Q ss_pred -CccccccCCCCchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhhcCcEEEe-CCCCCCCCceEEEEec-CC
Q psy8850 226 -GHEYGLRSGTLATHQIVGMGEAFRLAR-IEMKEELKRILFLQKRLYNGLMESIEEIYIN-GDMNNRIPHNLNISFN-FI 301 (397)
Q Consensus 226 -~~~~~~~~~~~~~~~~~~l~~al~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~ 301 (397)
+...+...-|++...++++.+||.++. +|+++..++++++.++++..|++ -|++.. ..+..+.+....+..+ +.
T Consensus 249 c~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~--~GLq~fv~~e~~rlptvttv~vp~gv 326 (385)
T KOG2862|consen 249 CDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEA--LGLQLFVVDEELRLPTVTTVKVPYGV 326 (385)
T ss_pred cCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCccceecChhhccCcceeeecCCCC
Confidence 112234455888999999999999884 58999999999999999999999 455543 4556677777777766 57
Q ss_pred ChHHHHHHhC---CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCC-CCHHHHHHHHHHHHHHHHHH
Q psy8850 302 EGESLLMAIK---DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRF-TTEKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 302 ~~~~~~~~l~---~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~-~~~~~i~~~~~~l~~~~~~~ 373 (397)
+..+++..+. ++.+..|... -.+..+||.+..+ -+.+.|+..++.|+..+.+-
T Consensus 327 Dw~dVv~~~~~~~~vei~gglg~-------------------~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~~ 383 (385)
T KOG2862|consen 327 DWKDVVAYAMSHYVVEIGGGLGP-------------------TVGKVFRIGLLGCNANVEYIDNVVELLKLALQRK 383 (385)
T ss_pred CHHHHHHHHHHhcCEEeccccCC-------------------CcccEEEEEEeeccCCcHHHHHHHHHHHHHHhhc
Confidence 8888888776 4444433211 2258899986543 56899999999998887654
No 119
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.97 E-value=3.9e-28 Score=228.82 Aligned_cols=317 Identities=12% Similarity=0.067 Sum_probs=218.6
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHh----C----CCCC-cEEEeCChhHHHHHHHHHh
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLI----Y----ADPR-EIIWTSGATESNNLAIKGA 78 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~----~~~~-~i~~~~g~t~a~~~~l~~l 78 (397)
++|+.+++++.+.+..... |.. .....++++++++++ + ++++ +|++|+|+++|+.+++.++
T Consensus 41 ~~~~~~~~a~~~~~~~~~~------Y~~----~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~~al~~~~~~l 110 (393)
T TIGR03538 41 PTPAFVLEALRENLHGLST------YPT----TKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTREALFAFAQAV 110 (393)
T ss_pred CCCHHHHHHHHHHhhccCC------CCC----CCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCcHHHHHHHHHHH
Confidence 4678889998887643221 211 123455666666665 3 5564 7999999999999999988
Q ss_pred HhhhccCCCE--EEEcCCCChhhHHHHHHHhhCCcEEEEeccCCC--CCCCHHHHHHHhcCCceEEEEecccCccccccc
Q psy8850 79 AHFYKKRGKH--IITVQTEHKSVLDSIRKLENDGFRVTYLKPKNN--GLITLSQLEEKICSDTILVSVMLVNNEIGVIQP 154 (397)
Q Consensus 79 ~~~~~~~g~~--vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~--~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~ 154 (397)
. ++||. |+++.|.|+.+...+... |.+++.+|++++ +.+|++++++++.++++++++++|+||||.+++
T Consensus 111 ~----~~gd~~~vlv~~P~y~~~~~~~~~~---g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~p~NPtG~~~s 183 (393)
T TIGR03538 111 I----NPGQAPLVVMPNPFYQIYEGAALLA---GAEPYFLNCTAENGFLPDFDAVPESVWRRCQLLFVCSPGNPTGAVLS 183 (393)
T ss_pred c----CCCCcceEEecCCCCcchHHHHHhc---CCeEEEeeccccCCCCCCHHHHHHHHhhcceEEEEeCCCCCcCcccC
Confidence 8 78875 999999999988776666 999999998643 468999999998889999999999999999999
Q ss_pred ---HHHHHHHHHhcCcEEEEecccccCcc-----ccc----cC-----cccccEEEeccccccCCCC--ceEEEEecCCC
Q psy8850 155 ---ILEIGELCRSKGVIFHCDAAQAVGKI-----DIN----IQ-----NYKVDLMSFSAHKIYGPKG--IGALYIRRNPR 215 (397)
Q Consensus 155 ---l~~i~~l~~~~gi~livD~a~~~~~~-----~~~----~~-----~~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~ 215 (397)
+++|+++|++||++||+|++|..... +.. .. ..+..+++.|++|.++.+| +|+++.+++..
T Consensus 184 ~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~GlRvG~~i~~~~l~ 263 (393)
T TIGR03538 184 LDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPGLRSGFVAGDAEIL 263 (393)
T ss_pred HHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcCCcccceEEEecCHHHH
Confidence 57888899999999999999873211 111 00 1134588999999555445 78888876655
Q ss_pred CccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEE
Q psy8850 216 TRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLN 295 (397)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 295 (397)
..+..... ......+.....+..+++.. .+.+++.++.++++++.+.+.|++ . +.+..+.+ +..++
T Consensus 264 ~~~~~~~~-------~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~L~~-~--~~~~~p~g---g~f~~ 329 (393)
T TIGR03538 264 KAFLRYRT-------YHGCAMPIPTQLASIAAWND-EQHVRENRALYREKFAAVLEILGQ-V--LDLELPDA---GFYLW 329 (393)
T ss_pred HHHHHHHH-------hhccCcCHHHHHHHHHHhcC-hHHHHHHHHHHHHHHHHHHHHHHh-h--CcccCCCe---eEEEE
Confidence 54433221 01112233333333334432 335777788889999999999987 3 22332222 55667
Q ss_pred EEecCCChHHHHHHh--C-CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHH
Q psy8850 296 ISFNFIEGESLLMAI--K-DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (397)
Q Consensus 296 ~~~~~~~~~~~~~~l--~-~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 369 (397)
+.++ .+..++.+.+ + ||.+.+|..|..... ....+.+++||++.. +++++++++++|.++
T Consensus 330 ~~~~-~~~~~~~~~l~~~~gV~v~pg~~f~~~~~-----------~~~~~~~~~Ris~~~--~~~~l~~~l~~l~~~ 392 (393)
T TIGR03538 330 PKVP-GDDEAFARALYEEENVTVLPGRFLAREAE-----------GVNPGEGRVRIALVA--PLEECVEAAERIRSF 392 (393)
T ss_pred EECC-CCHHHHHHHHHHHCCEEEeCCcccccccc-----------CCCCCCCEEEEEecC--CHHHHHHHHHHHHHh
Confidence 7776 4566777665 2 999999986643100 001123789999985 689999999998764
No 120
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.97 E-value=5.3e-27 Score=224.77 Aligned_cols=339 Identities=14% Similarity=0.160 Sum_probs=225.9
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCC
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGK 87 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~ 87 (397)
..|+.+++++.+...- ......+.........+.+.++++++++++|.+...+.. ++|+.+....+..+.....++|+
T Consensus 81 ~~~p~i~~~~~~~~~~-~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~~~~~l~~-~~GA~a~~~~l~~~r~~~~~~Gd 158 (481)
T PRK04366 81 KYNPKINEKVARLPGF-AELHPLQPEETVQGALELMYELQEWLKEITGMDAVTLQP-AAGAHGELTGLLMIRAYHEARGD 158 (481)
T ss_pred CCCHHHHHHHHhCcch-hcCCCCCChhhhhHHHHHHHHHHHHHHHHhCCCceEEEe-CcHHHHHHHHHHHHHHHhhccCc
Confidence 5678888888765211 111111011233445678899999999999997333333 34433333222211111114444
Q ss_pred ----EEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCccccc-ccHHHHHHHH
Q psy8850 88 ----HIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVI-QPILEIGELC 162 (397)
Q Consensus 88 ----~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~-~~l~~i~~l~ 162 (397)
+|+++.++|+++...+... |++++.+|.+.++.+|+++|++++++++++|++++++ ++|.+ .|+++|+++|
T Consensus 159 ~~~~~Vlv~~~~hp~~~~~~~~~---G~~vv~v~~~~~~~~D~e~L~~~i~~~t~~V~v~~Pn-~tG~~~~dl~eI~~~a 234 (481)
T PRK04366 159 TKRTEVIVPDSAHGTNPASAAMA---GFKVVEIPSNEDGLVDLEALKAAVGEDTAALMLTNPN-TLGLFERNILEIAEIV 234 (481)
T ss_pred CCCCEEEEcCCccHhHHHHHHHc---CCEEEEeecCCCCCcCHHHHHhhcccCCeEEEEeCCC-CccccchHHHHHHHHH
Confidence 9999999999999887665 9999999998888999999999999999999999877 89987 5899999999
Q ss_pred HhcCcEEEEecccccCcc-ccccCcccccEEEecccc-ccCC-----CCceEEEEecCCCCcccccccc--CC-------
Q psy8850 163 RSKGVIFHCDAAQAVGKI-DINIQNYKVDLMSFSAHK-IYGP-----KGIGALYIRRNPRTRIEAQIHG--GG------- 226 (397)
Q Consensus 163 ~~~gi~livD~a~~~~~~-~~~~~~~~~d~~~~s~~K-~~g~-----~g~g~~~~~~~~~~~~~~~~~~--~~------- 226 (397)
|++|+++++|+++..+.. ..+...+++|++++|+|| +++| +|+|+++++++....+.....+ +.
T Consensus 235 ~~~gal~iVD~a~~~~~~g~~~~~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~lp~~~v~~~g~~~~l~~~ 314 (481)
T PRK04366 235 HEAGGLLYYDGANLNAILGKARPGDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEELAPFLPVPVVEKDGDRYRLDYD 314 (481)
T ss_pred HHcCCEEEEEecChhhhcccCCccccCCCEEEEechhhcCCCCCCCCCCeeeeeehhhhHhhCCCCeeeccCCceeeccc
Confidence 999999999999985532 235567799999999999 5534 4568999987765555322211 00
Q ss_pred ---ccccccCCCCchhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEec---
Q psy8850 227 ---HEYGLRSGTLATHQIVGMGEAFRLA-RIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN--- 299 (397)
Q Consensus 227 ---~~~~~~~~~~~~~~~~~l~~al~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--- 299 (397)
...+++.++.+...+.+....+..+ .++++++.++..+++++++++|++ +..+ ... . .....+.+.++
T Consensus 315 r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~-~~~~--~~~-~-~~~~~~~~~~~~~~ 389 (481)
T PRK04366 315 RPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKD-IYDL--PYD-R-PCMHEFVLSGKKLK 389 (481)
T ss_pred ccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHh-hCcc--cCC-C-CeeEEEEEECcccc
Confidence 0113334443333333333333333 456888888899999999999998 4332 211 1 11123334332
Q ss_pred --CCChHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHHHh
Q psy8850 300 --FIEGESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKLRE 375 (397)
Q Consensus 300 --~~~~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 375 (397)
+.+..++.+.|. |+.+. ....| ....+.+|++++.++|++|||+++++|.++.++..+
T Consensus 390 ~~g~~~~~v~~~L~~~Gi~~~--~~~~p----------------~~~~~~l~is~~e~~t~edid~l~~~l~~i~~~~~~ 451 (481)
T PRK04366 390 ETGVRTLDIAKRLLDYGFHPP--TIYFP----------------LIVPEALMIEPTETESKETLDAFIAAMKQIAEEAKE 451 (481)
T ss_pred ccCCCHHHHHHHHHHCCccCC--ccccc----------------cccCCeEEEcccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 346678888886 55433 11111 001368999999999999999999999999888765
No 121
>PRK07777 aminotransferase; Validated
Probab=99.96 E-value=1.5e-27 Score=224.53 Aligned_cols=321 Identities=15% Similarity=0.123 Sum_probs=219.6
Q ss_pred CHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCC--CC-cEEEeCChhHHHHHHHHHhHhhhccCC
Q psy8850 10 DPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYAD--PR-EIIWTSGATESNNLAIKGAAHFYKKRG 86 (397)
Q Consensus 10 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~--~~-~i~~~~g~t~a~~~~l~~l~~~~~~~g 86 (397)
|+.+.+++.+.+... .. .|.......+..+.+.+.+.+.+|.+ ++ +|++|+|+++|+.+++.++. ++|
T Consensus 39 ~~~~~~~~~~~~~~~----~~-~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~----~~g 109 (387)
T PRK07777 39 PPEMLEAAQEAIAGG----VN-QYPPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIAAAVLGLV----EPG 109 (387)
T ss_pred CHHHHHHHHHHHhcC----CC-CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHhc----CCC
Confidence 556777777666431 11 22222222233333444444446653 44 69999999999999998887 789
Q ss_pred CEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCC---CCCCHHHHHHHhcCCceEEEEecccCccccccc---HHHHHH
Q psy8850 87 KHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNN---GLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---ILEIGE 160 (397)
Q Consensus 87 ~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~---~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~---l~~i~~ 160 (397)
|+|++..+.|+.+...+... |.+++.++.+++ +.+|++++++++.+++++|++++++||||.+++ +++|++
T Consensus 110 d~vli~~p~y~~~~~~~~~~---g~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~ 186 (387)
T PRK07777 110 DEVLLIEPYYDSYAAVIAMA---GAHRVPVPLVPDGRGFALDLDALRAAVTPRTRALIVNSPHNPTGTVLTAAELAAIAE 186 (387)
T ss_pred CEEEEeCCCchhhHHHHHHC---CCEEEEeecCCccCCCcCCHHHHHHhcCcccEEEEEcCCCCCCCccCCHHHHHHHHH
Confidence 99999999999988776666 889999988653 468999999999889999999999999999987 678899
Q ss_pred HHHhcCcEEEEecccccCcc------ccc-cCc-ccccEEEeccccccCCCC--ceEEEEecCCCCccccccccCCcccc
Q psy8850 161 LCRSKGVIFHCDAAQAVGKI------DIN-IQN-YKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYG 230 (397)
Q Consensus 161 l~~~~gi~livD~a~~~~~~------~~~-~~~-~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~ 230 (397)
+|++||+++|+|++|+.... ++. +.. .+.++++.|++|.+|.+| +|+++++++..+.+......
T Consensus 187 ~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~l~~~~~~~~~~------ 260 (387)
T PRK07777 187 LAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGWACGPAPLIAAVRAAKQY------ 260 (387)
T ss_pred HHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCceeEEEecCHHHHHHHHHHHhh------
Confidence 99999999999999863211 111 111 246799999999766445 68888876655444332210
Q ss_pred ccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEec---CCChHHHH
Q psy8850 231 LRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN---FIEGESLL 307 (397)
Q Consensus 231 ~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 307 (397)
... ..+.....++..++......+++..+.++++++.+.+.|++ + ++.+..+.+ +..+++.++ ..++.++.
T Consensus 261 ~~~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-~~~~~~~~g---~~~~~~~~~~~~~~~~~~~~ 334 (387)
T PRK07777 261 LTY-VGGAPFQPAVAHALDHEDAWVAALRDSLQAKRDRLAAGLAE-A-GFEVHDSAG---TYFLCADPRPLGYDDGTEFC 334 (387)
T ss_pred ccc-CCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHh-C-CCCccCCCc---ceEEEecccccCCCCHHHHH
Confidence 001 11222233333444433345677888999999999999988 4 555554432 334455543 23567888
Q ss_pred HHhC---CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHH
Q psy8850 308 MAIK---DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKV 370 (397)
Q Consensus 308 ~~l~---~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~ 370 (397)
+.|. +|.+.+|..|... .....+++||+++. +++++++.+++|.+++
T Consensus 335 ~~l~~~~gv~v~pg~~f~~~--------------~~~~~~~~Ri~~~~--~~~~l~~~l~~l~~~~ 384 (387)
T PRK07777 335 RALPERVGVAAIPMSVFYDP--------------ADAWNHLVRFAFCK--RDDTLDEAIRRLRALR 384 (387)
T ss_pred HHHHHhCCEEEeCchHhCCC--------------CcCCCCeEEEEecC--CHHHHHHHHHHHHHHh
Confidence 8883 8999999755420 11123789999985 7999999999998765
No 122
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.96 E-value=2.4e-28 Score=233.45 Aligned_cols=314 Identities=18% Similarity=0.199 Sum_probs=216.6
Q ss_pred HHHHHHHHHHHHhC--------CCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHH-HhhCCcE
Q psy8850 42 AIEKARNEVAQLIY--------ADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRK-LENDGFR 112 (397)
Q Consensus 42 ~~~~~~~~la~~~~--------~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~-~~~~g~~ 112 (397)
...+++++++++++ +++++|++|+|+++++.+++.+++ ++||.|++++|.|+.+...+.. . |.+
T Consensus 87 G~~~LR~aiA~~l~~~~~~~~~v~~~~Iiit~Ga~~al~~l~~~l~----~pGd~Vlv~~P~Y~~~~~~~~~~~---g~~ 159 (468)
T PLN02450 87 GLPAFKNALAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMFCLA----EPGDAFLLPTPYYPGFDRDLKWRT---GVE 159 (468)
T ss_pred ChHHHHHHHHHHHHHhhCCCCCcChHHeEEccChHHHHHHHHHHhC----CCCCEEEECCCCCCchHHHHhhcC---CcE
Confidence 45567777777764 577889999999999999999988 8999999999999999876663 4 899
Q ss_pred EEEeccC--CCCCCCHHHHHHHhcC------CceEEEEecccCccccccc---HHHHHHHHHhcCcEEEEecccccC---
Q psy8850 113 VTYLKPK--NNGLITLSQLEEKICS------DTILVSVMLVNNEIGVIQP---ILEIGELCRSKGVIFHCDAAQAVG--- 178 (397)
Q Consensus 113 v~~v~~~--~~~~~d~~~l~~~i~~------~~~~v~~~~~~~~tG~~~~---l~~i~~l~~~~gi~livD~a~~~~--- 178 (397)
++.+|++ ++..+|++++++++.+ +++++++++|+||||.+++ +++|+++|++||++||+|++|+..
T Consensus 160 ~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~ 239 (468)
T PLN02450 160 IVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFD 239 (468)
T ss_pred EEEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccC
Confidence 9999985 3456788999988754 7899999999999999999 467888899999999999999831
Q ss_pred ccc----cccC---------cccccEEEeccccccCCCC--ceEEEEecCC-CCccccccccCCccccccCCCCchhHHH
Q psy8850 179 KID----INIQ---------NYKVDLMSFSAHKIYGPKG--IGALYIRRNP-RTRIEAQIHGGGHEYGLRSGTLATHQIV 242 (397)
Q Consensus 179 ~~~----~~~~---------~~~~d~~~~s~~K~~g~~g--~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (397)
..+ .... ..+..+++.|++|.+|.+| +|+++.+++. ...+.... . .+..+.....
T Consensus 240 ~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~~l~~~~~~~~-~--------~~~~s~~~Q~ 310 (468)
T PLN02450 240 SPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSNDEMVVSAATKMS-S--------FGLVSSQTQY 310 (468)
T ss_pred CCCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCCCccEEEEEECCHHHHHHHHHHh-h--------cCCCCHHHHH
Confidence 111 1110 1234688999999655444 7998887442 22221111 0 1122334444
Q ss_pred HHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecC-CC------hHHHHHHh-C
Q psy8850 243 GMGEAFRLA---RIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF-IE------GESLLMAI-K 311 (397)
Q Consensus 243 ~l~~al~~~---~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~~~~~~~l-~ 311 (397)
++..+++.. ...+.+.++++.+.++.+.+.|++ + ++.+..+.. +.++++.++. .+ ..++...+ .
T Consensus 311 a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~-~-gi~~~~~~~---g~flwi~l~~~~~~~~~~~~~~l~~~ll~ 385 (468)
T PLN02450 311 LLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEA-A-GIKCLKSNA---GLFCWVDMRHLLKSNTFEAEMELWKKIVY 385 (468)
T ss_pred HHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHH-c-CCcccCCCc---eEEEEEEchHhcCcCCchHHHHHHHHHHH
Confidence 444555421 224677788999999999999998 4 665544332 3456666642 11 12344444 2
Q ss_pred --CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHHH----hcCccchhhhc
Q psy8850 312 --DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKLR----ELSPLWDMHKE 385 (397)
Q Consensus 312 --~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~----~~~~~~~~~~~ 385 (397)
||.+.||..|... ..+++||+++. .+++++++.+++|++++.+.. -++..++++ -
T Consensus 386 ~~gV~v~PG~~f~~~-----------------~~g~~Rl~f~~-~~~~~l~~~l~ri~~~l~~~~~~~~~~~~~~~~~-~ 446 (468)
T PLN02450 386 EVKLNISPGSSCHCT-----------------EPGWFRVCFAN-MSEETLDLAMKRLKSFVESDSGRRINKSSHQRLK-N 446 (468)
T ss_pred hCCEEEeCccccCCC-----------------CCCEEEEEecC-CCHHHHHHHHHHHHHHHHhccccccccchhcccc-c
Confidence 8999999766431 13799999996 468999999999999987665 233333222 2
Q ss_pred cccccccccc
Q psy8850 386 GIDLNTIKWA 395 (397)
Q Consensus 386 ~~~~~~~~~~ 395 (397)
-..+--+||.
T Consensus 447 ~~~~~~~~~~ 456 (468)
T PLN02450 447 LRRKTVSKWV 456 (468)
T ss_pred ccchhhhccc
Confidence 2344456775
No 123
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.96 E-value=3e-27 Score=226.41 Aligned_cols=304 Identities=17% Similarity=0.189 Sum_probs=221.6
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHHhh-CCcEEEEe
Q psy8850 38 TAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLEN-DGFRVTYL 116 (397)
Q Consensus 38 ~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~-~g~~v~~v 116 (397)
...+...+.++++++++|++.+++.+++|+|++++.++.++.. .+|++|++++++|+++...+..++. .|.+++.+
T Consensus 109 g~~~~~~e~~~~la~l~g~~~~~v~~~~g~t~~~~~~~~a~~~---~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v 185 (447)
T PRK00451 109 GTLQAIFEYQTMICELTGMDVANASMYDGATALAEAALMAVRI---TKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEV 185 (447)
T ss_pred HHHHHHHHHHHHHHHHhCCCcceEEecCcHHHHHHHHHHHHHh---cCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEe
Confidence 3456677788899999999988999999999999988887642 5789999999999999999887544 38999999
Q ss_pred ccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEE--ecccccCccccccCcccccEEEe
Q psy8850 117 KPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHC--DAAQAVGKIDINIQNYKVDLMSF 194 (397)
Q Consensus 117 ~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~liv--D~a~~~~~~~~~~~~~~~d~~~~ 194 (397)
|.+++ .+|++++++++++++++|+++++ |+||.+.|+++|.++||++|+++++ |.. +.+... ....+++|++++
T Consensus 186 ~~~~~-~~d~~~l~~~i~~~t~~v~l~~p-n~tG~v~~l~~I~~~a~~~~~~~iv~~d~~-~~g~~~-~~~~~~~D~~~~ 261 (447)
T PRK00451 186 PYEDG-VTDLEALEAAVDDDTAAVVVQYP-NFFGVIEDLEEIAEIAHAGGALFIVGVDPV-SLGLLK-PPGEYGADIVVG 261 (447)
T ss_pred cCCCC-CCCHHHHHHhcCCCeEEEEEECC-CCCCeeCCHHHHHHHHHHCCCEEEEEcChH-HhccCC-CcccCCCCEEEE
Confidence 99877 89999999999999999999998 8999999999999999999999998 544 344433 234568999999
Q ss_pred ccccc-----cCCCCceEEEEecCCCCccccccccCCc-----------------cccccCCCCchh---HHH--HHHHH
Q psy8850 195 SAHKI-----YGPKGIGALYIRRNPRTRIEAQIHGGGH-----------------EYGLRSGTLATH---QIV--GMGEA 247 (397)
Q Consensus 195 s~~K~-----~g~~g~g~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~---~~~--~l~~a 247 (397)
|.+|+ +|++|+|+++++++....+.+.+.++.. ..++..++.+.. .+. +...+
T Consensus 262 s~~k~~~~~~~~Gpg~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~ 341 (447)
T PRK00451 262 EGQPLGIPLSFGGPYLGFFATRKKLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIY 341 (447)
T ss_pred CCCcCCCCCCCCCCCchHHHhhHHHHhhCCCCEeeeecccCCCeeeEeeccccccccccccccccccccHHHHHHHHHHH
Confidence 88774 4444799999988776665443333211 012222333322 122 22224
Q ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCChHHHHHHhC--CcEec-ccCccCC
Q psy8850 248 FRLA-RIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAIK--DIAVS-SGSACTS 323 (397)
Q Consensus 248 l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~i~~~-~g~~~~~ 323 (397)
++.+ .++++++.+++.++++++.+.|++ ++++.+.. +. ....+.+.++ .+..++.+.|. ++... ++..+.+
T Consensus 342 l~~~~~~g~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~--~~-~~~~~~v~~~-~~~~~~~~~L~~~gi~~~~~~~~~~~ 416 (447)
T PRK00451 342 MSLLGPEGLRELAEQNHQKAHYLAERLAE-IGGVELFD--GP-FFNEFVVRLP-KPAEEVNEALLEKGILGGYDLGRYYP 416 (447)
T ss_pred HHHHCHHHHHHHHHHHHHHHHHHHHHHhh-cCCEEecC--CC-eEEEEEEecC-CCHHHHHHHHHhcCCCCCcccccccC
Confidence 4544 457899999999999999999998 88887762 11 1122334443 35678888876 44321 1111111
Q ss_pred CCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHH
Q psy8850 324 ASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKV 370 (397)
Q Consensus 324 ~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~ 370 (397)
. ..+++|++++.++++++|++++++|++++
T Consensus 417 ----------------~-~~~~~rvs~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 417 ----------------E-LGNHLLVCVTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred ----------------C-cCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 0 12689999998899999999999998764
No 124
>PRK03321 putative aminotransferase; Provisional
Probab=99.96 E-value=8.4e-28 Score=223.45 Aligned_cols=303 Identities=13% Similarity=0.107 Sum_probs=217.2
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCC
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGK 87 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~ 87 (397)
.+++.+++++.+.+.....+| .....++++.+++++++++++|++++|+++++..++.++. ++||
T Consensus 35 ~~~~~~~~a~~~~~~~~~~y~-----------~~g~~~lr~~ia~~~~~~~~~I~~~~G~~~~l~~~~~~~~----~~gd 99 (352)
T PRK03321 35 GPLPSVRAAIARAAAGVNRYP-----------DMGAVELRAALAEHLGVPPEHVAVGCGSVALCQQLVQATA----GPGD 99 (352)
T ss_pred CCCHHHHHHHHHHHHhcCcCC-----------CCcHHHHHHHHHHHhCcCHHHEEECCCHHHHHHHHHHHhc----CCCC
Confidence 367799999988775432222 1246889999999999988899999999999999888776 7999
Q ss_pred EEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHh--c
Q psy8850 88 HIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRS--K 165 (397)
Q Consensus 88 ~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~--~ 165 (397)
+|+++.+.|..+....+.. |.+++.+|.++++.+|+++++++++++++++++++++||||.++|.+++.++|+. +
T Consensus 100 ~Vli~~p~y~~~~~~~~~~---g~~~~~v~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~~~~~ 176 (352)
T PRK03321 100 EVIFAWRSFEAYPILVQVA---GATPVQVPLTPDHTHDLDAMAAAITDRTRLIFVCNPNNPTGTVVTPAELARFLDAVPA 176 (352)
T ss_pred EEEeCCCCHHHHHHHHHHc---CCEEEEccCCCCCCCCHHHHHHhhccCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCC
Confidence 9999999888776665555 9999999998667789999999998899999999999999999999999999987 5
Q ss_pred CcEEEEecccccCcc----c--cc-cCcccccEEEeccccccCCCC--ceEEEEecCCCCccccccccCCccccccCCCC
Q psy8850 166 GVIFHCDAAQAVGKI----D--IN-IQNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTL 236 (397)
Q Consensus 166 gi~livD~a~~~~~~----~--~~-~~~~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (397)
|+++|+|++|..... + +. ....+..+++.|++|.+|.+| +|+++++++..+.+..... ..+.
T Consensus 177 ~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~~~~~~~~~~---------~~~~ 247 (352)
T PRK03321 177 DVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGHPEVIAALRKVAV---------PFSV 247 (352)
T ss_pred CeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCCHHHHHHHHHhcC---------CCCC
Confidence 999999999872211 1 11 111134577889999766445 7999988766555543321 1233
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCChHHHHHHhC--CcE
Q psy8850 237 ATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAIK--DIA 314 (397)
Q Consensus 237 ~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~i~ 314 (397)
+.....+..++++... .+.+..+++.+.++.+.+.|++ . ++.+.. +. +.++++.++ .+..++.+.|. ||.
T Consensus 248 s~~~q~~a~~~l~~~~-~~~~~~~~~~~~r~~~~~~L~~-~-~~~~~~-~~---g~~i~i~l~-~~~~~~~~~l~~~gI~ 319 (352)
T PRK03321 248 NSLAQAAAIASLAAED-ELLERVDAVVAERDRVRAALRA-A-GWTVPP-SQ---ANFVWLPLG-ERTADFAAAAAEAGVV 319 (352)
T ss_pred CHHHHHHHHHHhcCHH-HHHHHHHHHHHHHHHHHHHHHH-C-CCccCC-CC---CCEEEEeCC-CCHHHHHHHHHHCCEE
Confidence 3344443334554222 2333444555566778888887 3 544322 12 345566654 34567777775 887
Q ss_pred ecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHH
Q psy8850 315 VSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVK 371 (397)
Q Consensus 315 ~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 371 (397)
+.+ |. .+.|||+++ +.+++++++++|++++.
T Consensus 320 v~~---~~--------------------~~~iRi~~~---~~~~~~~~~~al~~~~~ 350 (352)
T PRK03321 320 VRP---FA--------------------GEGVRVTIG---APEENDAFLRAARAWRA 350 (352)
T ss_pred EEc---cC--------------------CCcEEEeeC---CHHHHHHHHHHHHHHhc
Confidence 764 11 156999986 69999999999998753
No 125
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=2.2e-27 Score=220.94 Aligned_cols=303 Identities=12% Similarity=0.070 Sum_probs=212.5
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCC
Q psy8850 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRG 86 (397)
Q Consensus 7 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g 86 (397)
..+|+.+.+++.+.......+|. ....++++.+++++++++++|++|+|+++++.++++++. ++|
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~Y~~-----------~~~~~lr~~ia~~~~~~~~~I~it~G~~~al~~~~~~~~----~~g 106 (357)
T PRK14809 42 HGPSPAAVEAIREAAERVHSYPK-----------ASHADLTAALADRWDVSPEQVWLANGGDGALDYLARAML----DPG 106 (357)
T ss_pred CCCCHHHHHHHHHHHhhhhcCCC-----------CCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHhc----CCC
Confidence 35678888998887654222221 135689999999999999999999999999999999887 799
Q ss_pred CEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCC--CCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHh
Q psy8850 87 KHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN--NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRS 164 (397)
Q Consensus 87 ~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~ 164 (397)
|+|++++|+|+.+....... |.+++.++++. +..++++++++.. ++++++++++++||||.++|.+++.++++.
T Consensus 107 d~V~v~~P~y~~~~~~~~~~---g~~~~~~~l~~~~~~~~~~~~~~~~~-~~~k~i~l~~p~NPTG~~~s~~~~~~l~~~ 182 (357)
T PRK14809 107 DTVLVPDPGFAYYGMSARYH---HGEVREYPVSKADDFEQTADTVLDAY-DGERIVYLTSPHNPTGSEIPLDEVEALAER 182 (357)
T ss_pred CEEEEeCCChHHHHHHHHHc---CCeEEEEecccCcCCCcCHHHHHHhh-cCCcEEEEeCCCCCCCcCCCHHHHHHHHHh
Confidence 99999999998777655555 88888888853 3466778877765 468899999999999999998777777665
Q ss_pred c--CcEEEEecccccCccc---cc-cCcccccEEEeccccccCCCC--ceEEEEecCCCCccccccccCCccccccCCCC
Q psy8850 165 K--GVIFHCDAAQAVGKID---IN-IQNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTL 236 (397)
Q Consensus 165 ~--gi~livD~a~~~~~~~---~~-~~~~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (397)
. +++||+|++|...... .. ....+..+++.|++|.+|.+| +|+++++++..+.+..... ....
T Consensus 183 ~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~~~~~~~---------~~~~ 253 (357)
T PRK14809 183 TDEETLVVVDEAYGEFAERPSAVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVPEEWADAYARVNT---------PFAA 253 (357)
T ss_pred CccCcEEEEechhhhccCCchhHHHHhhCCCEEEEecchhHhcCcchhheeeecCHHHHHHHHHhCC---------CCCC
Confidence 3 7899999999732211 11 111134578899999766445 7999988766555543321 1122
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCChHHHHHHhC--CcE
Q psy8850 237 ATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAIK--DIA 314 (397)
Q Consensus 237 ~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~i~ 314 (397)
+.....+...+++. .+.+++..+.++++++++.+.|.. . . . ++. +.++++.++ +..++.+.+. ||.
T Consensus 254 ~~~~~~~a~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~-~-~---~-~~~---g~f~~~~~~--~~~~~~~~l~~~gv~ 321 (357)
T PRK14809 254 SELACRAGLAALDD-DEHVERTVETARWAREYIREELDA-P-T---W-ESA---GNFVLAEVG--DASAVAEAAQERGVI 321 (357)
T ss_pred CHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHhcC-c-c---C-CCC---CCEEEEECC--CHHHHHHHHHHCCEE
Confidence 33322322244432 334667777888888888888865 2 1 1 112 445556554 4567777665 899
Q ss_pred ecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHH
Q psy8850 315 VSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVK 371 (397)
Q Consensus 315 ~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 371 (397)
+.+|..|.. .++|||+++ +.+++++++++|+++++
T Consensus 322 v~~g~~f~~-------------------~~~iRls~~---~~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 322 VRDCTSFGL-------------------PECIRITCG---TREETERAVEVLNEVLA 356 (357)
T ss_pred EEECccCCC-------------------CCeEEEecC---CHHHHHHHHHHHHHHhc
Confidence 999865532 278999986 47899999999988764
No 126
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.96 E-value=1e-27 Score=224.08 Aligned_cols=304 Identities=13% Similarity=0.104 Sum_probs=209.8
Q ss_pred hhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHH-HhhCCcEEE
Q psy8850 36 GWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRK-LENDGFRVT 114 (397)
Q Consensus 36 ~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~-~~~~g~~v~ 114 (397)
++...+...++++.+++++|.+ ++++++||++|+..++.++. ++||+|+++++.|+++...+.. +...|++++
T Consensus 56 ~r~~~p~~~~le~~la~l~g~~--~~v~~ssG~~Ai~~al~al~----~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~ 129 (390)
T PRK08133 56 SRFTNPTVTMFQERLAALEGAE--ACVATASGMAAILAVVMALL----QAGDHVVSSRSLFGSTVSLFEKIFARFGIETT 129 (390)
T ss_pred ECCCChHHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHHh----CCCCEEEEccCcchhHHHHHHHHHHHcCcEEE
Confidence 3444567888999999999976 58889999999999998887 7999999999999988776653 344599999
Q ss_pred EeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCccccccCcccccEEEe
Q psy8850 115 YLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSF 194 (397)
Q Consensus 115 ~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~~ 194 (397)
.++.+ |++++++++++++++|++++++||+|.+.|+++|+++|+++|+++|+|++++.+..... ...++|+++.
T Consensus 130 ~vd~~-----d~~~l~~~i~~~tklV~ie~p~NptG~v~dl~~I~~la~~~gi~livD~t~~~~~~~~p-l~~g~Divv~ 203 (390)
T PRK08133 130 FVDLT-----DLDAWRAAVRPNTKLFFLETPSNPLTELADIAALAEIAHAAGALLVVDNCFCTPALQQP-LKLGADVVIH 203 (390)
T ss_pred EECCC-----CHHHHHHhcCcCCeEEEEECCCCCCCCcCCHHHHHHHHHHcCCEEEEECCCcccccCCc-hhhCCcEEEe
Confidence 99875 78999999999999999999999999999999999999999999999999875543222 2347899999
Q ss_pred ccccccCCCC--c-eEEEEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8850 195 SAHKIYGPKG--I-GALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYN 271 (397)
Q Consensus 195 s~~K~~g~~g--~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~ 271 (397)
|++|++++.| . |+++.+++....+...... .....+....+ .++..+ +.+..+.++..+++..+.+
T Consensus 204 S~sK~~~g~g~~~GG~vv~~~~~~~~~~~~~~~-------~g~~~~~~~a~---~~l~gl-~tl~~R~~~~~~~a~~la~ 272 (390)
T PRK08133 204 SATKYLDGQGRVLGGAVVGSKELMEEVFGFLRT-------AGPTLSPFNAW---VFLKGL-ETLSLRMEAHSANALALAE 272 (390)
T ss_pred ecceeecCCcceEeEEEEcCHHHHHHHHHHHHH-------hCCCCCHHHHH---HHHccc-chHHHHHHHHHHHHHHHHH
Confidence 9999665544 3 6666665443333222111 01112212211 122211 1355566777788889999
Q ss_pred HHhhhcCcEEEeCCCC--------------CCCCceEEEEecCC--ChHHHHHHhC--CcEecccCccC----CCCCCh-
Q psy8850 272 GLMESIEEIYINGDMN--------------NRIPHNLNISFNFI--EGESLLMAIK--DIAVSSGSACT----SASLEP- 328 (397)
Q Consensus 272 ~l~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~--~~~~~~~~l~--~i~~~~g~~~~----~~~~~~- 328 (397)
.|++ .+++..+..+. ...++++.|.+++. ....+.+.|+ .+...-|..-+ |..+.+
T Consensus 273 ~L~~-~p~v~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l~~~~~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~~~ 351 (390)
T PRK08133 273 WLEA-HPGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVKGGREAAWRVIDATRLISITANLGDTKTTITHPATTTHG 351 (390)
T ss_pred HHHh-CCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCHHHHHHHHHhCCcceEeccCCCcceeeecCCCCCcc
Confidence 9988 77765443322 23467888888631 1345555665 33444443222 211111
Q ss_pred ---hhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHH
Q psy8850 329 ---SYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVK 371 (397)
Q Consensus 329 ---~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 371 (397)
....+..|+.+ +.||+|++. |+.|.+++.|+++++
T Consensus 352 ~~~~~~~~~~gi~~----~liR~svGl----E~~~dl~~dl~~al~ 389 (390)
T PRK08133 352 RLSPEARAAAGITE----GLIRVAVGL----EDVADIKADLARGLA 389 (390)
T ss_pred cCCHHHHHhcCCCC----CeEEEEeCc----CCHHHHHHHHHHHhh
Confidence 12234566654 899999997 567777777777654
No 127
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.96 E-value=3.8e-27 Score=219.46 Aligned_cols=307 Identities=15% Similarity=0.059 Sum_probs=217.1
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCC
Q psy8850 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRG 86 (397)
Q Consensus 7 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g 86 (397)
.++|+.+.+++.+.+.... .|.. . ...++++.+++++++++++|++|+|+++++.+++.++. +|
T Consensus 34 ~~~~~~~~~a~~~~~~~~~------~Y~~----~-~~~~Lr~aia~~~~v~~~~I~it~G~~~~i~~~~~~l~-----~g 97 (360)
T PRK07392 34 LGPPESVIAAIQSALSALR------HYPD----P-DYRELRLALAQHHQLPPEWILPGNGAAELLTWAGRELA-----QL 97 (360)
T ss_pred CCCCHHHHHHHHHHHHHhh------cCCC----c-CHHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHHHhC-----CC
Confidence 4578899999887775422 1211 1 23588999999999999999999999999999988754 56
Q ss_pred CEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCC-----CCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHH
Q psy8850 87 KHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGL-----ITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGEL 161 (397)
Q Consensus 87 ~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~-----~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l 161 (397)
+.|++..|+|+.+...+... |.+++.+|.+.++. .+++++++.. ++++++++++||||||.+++.++|.++
T Consensus 98 ~~vlv~~P~y~~~~~~~~~~---g~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~nP~NPTG~~~~~~~l~~l 173 (360)
T PRK07392 98 RAVYLITPAFGDYRRALRAF---GATVKELPLPLDQPSPGLTLRLQTLPPQL-TPNDGLLLNNPHNPTGKLWSREAILPL 173 (360)
T ss_pred CeEEEECCCcHHHHHHHHHc---CCeEEEEecccccCCcccccCHHHHHHhc-cCCCEEEEeCCCCCCCCCcCHHHHHHH
Confidence 89999999999999888877 99999999975442 3566666543 468899999999999999999999999
Q ss_pred HHhcCcEEEEecccccCcc-----c-cc-cCcccccEEEeccccccCCCC--ceEEEEecCCCCccccccccCCcccccc
Q psy8850 162 CRSKGVIFHCDAAQAVGKI-----D-IN-IQNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLR 232 (397)
Q Consensus 162 ~~~~gi~livD~a~~~~~~-----~-~~-~~~~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (397)
++++++ +|+|++|.-... + .. +...+..+++.|++|.+|.+| +|+++++++..+.+.....
T Consensus 174 ~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~~~~~~~~~~~~~--------- 243 (360)
T PRK07392 174 LEQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAHPDRLQRWQQWRD--------- 243 (360)
T ss_pred HHHCCE-EEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCCHHHHHHHHhhCC---------
Confidence 999986 666999873211 1 11 111234688899999666444 7999887665544432211
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCChHHHHHHh-C
Q psy8850 233 SGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAI-K 311 (397)
Q Consensus 233 ~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~ 311 (397)
....+.....++.++++. .+..++..+.++++++++.+.|++ ++++.+.. .. ..++++.++. +..++...+ .
T Consensus 244 ~~~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~-~~~~~~~~-~~---~~fl~~~~~~-~~~~l~~~ll~ 316 (360)
T PRK07392 244 PWPVNGLAAAAAIAALAD-RDFQQQTWAWLPPAREALFQGLAS-LPGLTPLP-SA---ANFLLVQSQG-SALQLQEKLLQ 316 (360)
T ss_pred CCCCCHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHh-CCCcEECC-CC---CCEEEEEcCC-CHHHHHHHHHh
Confidence 123344444555455542 223455566788889999999987 77876543 22 4455666653 566777664 3
Q ss_pred --CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHH
Q psy8850 312 --DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKV 370 (397)
Q Consensus 312 --~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~ 370 (397)
||.+.+|..|.. ...++|||+++. .++.+++.++|.+++
T Consensus 317 ~~gv~v~pg~~f~~-----------------~~~~~iRi~~~~---~~~~~~l~~al~~~~ 357 (360)
T PRK07392 317 QHRILIRDCLSFPE-----------------LGDRYFRVAVRT---EAENQRLLEALAAIL 357 (360)
T ss_pred hCCEEEEeCCCCCC-----------------CCCCEEEEEeCC---HHHHHHHHHHHHHHh
Confidence 899999976532 123799999984 666777777777654
No 128
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.96 E-value=2.6e-27 Score=223.30 Aligned_cols=317 Identities=19% Similarity=0.190 Sum_probs=221.8
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCC
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGK 87 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~ 87 (397)
.++|.+++++.+++..+. .... .+...+...+...++++.++++++.+ +.+++++|++++..++..+. ++||
T Consensus 53 ~~~~~v~~a~~~~~~~~~-~~~~-~~~~~~g~~~~~~~l~~~la~~~~~~--~~i~~~~g~~~~~~~l~~~~----~~gd 124 (385)
T PRK05958 53 ARHPRLIAAAQQAARRYG-AGSG-GSRLVTGNSPAHEALEEELAEWFGAE--RALLFSSGYAANLAVLTALA----GKGD 124 (385)
T ss_pred CCCHHHHHHHHHHHHhcC-CCCC-CcCcccCCcHHHHHHHHHHHHHhCCC--cEEEECcHHHHHHHHHHHhC----CCCC
Confidence 367899999999987632 1111 11211222456788999999999953 45555667777777777665 8999
Q ss_pred EEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcC---CceEEEEecccCcccccccHHHHHHHHHh
Q psy8850 88 HIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS---DTILVSVMLVNNEIGVIQPILEIGELCRS 164 (397)
Q Consensus 88 ~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~---~~~~v~~~~~~~~tG~~~~l~~i~~l~~~ 164 (397)
+|++++++|+++...+... |.+++.++.. |++++++++++ ++.+++++++.|++|.+.++++|.++|++
T Consensus 125 ~V~~~~~~~~~~~~~~~~~---g~~~~~~~~~-----d~~~l~~~i~~~~~~~~lvi~~~~~~~~G~~~~l~~i~~ia~~ 196 (385)
T PRK05958 125 LIVSDKLNHASLIDGARLS---RARVRRYPHN-----DVDALEALLAKWRAGRALIVTESVFSMDGDLAPLAELVALARR 196 (385)
T ss_pred EEEEeCccCHHHHHHHHhc---CCceEEeCCC-----CHHHHHHHHHhccCCCeEEEEEecccCCCCcCCHHHHHHHHHH
Confidence 9999999999998877665 8888888753 88999998865 36777888899999999999999999999
Q ss_pred cCcEEEEecccccCccc------c---ccCcccccEEEeccccccCCCCceEEEEecCCCCccccccccCCccccccCCC
Q psy8850 165 KGVIFHCDAAQAVGKID------I---NIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGT 235 (397)
Q Consensus 165 ~gi~livD~a~~~~~~~------~---~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (397)
||+++|+|++|+.+... . .+.....++++.|++|.+|+.| |+++.+++....+...... . ...+.
T Consensus 197 ~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-g~~~~~~~~~~~~~~~~~~----~-~~~~~ 270 (385)
T PRK05958 197 HGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALGSSG-AAVLGSETLIDYLINRARP----F-IFTTA 270 (385)
T ss_pred hCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhcccCC-cEEEcCHHHHHHHHHhCcc----c-eecCC
Confidence 99999999999755322 1 1222234588999999777766 8887775543333211100 0 11123
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecC-CChHHHHHHhC--C
Q psy8850 236 LATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF-IEGESLLMAIK--D 312 (397)
Q Consensus 236 ~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~--~ 312 (397)
.+..++++..++++.+.+. .++.+++.++++++.+.|++ + ++.+..+ . +.++.+.+++ .+..++.+.|. |
T Consensus 271 ~~~~~~aa~~aal~~~~~~-~~~~~~~~~~~~~l~~~L~~-~-~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~l~~~g 343 (385)
T PRK05958 271 LPPAQAAAARAALRILRRE-PERRERLAALIARLRAGLRA-L-GFQLMDS-Q---SAIQPLIVGDNERALALAAALQEQG 343 (385)
T ss_pred CCHHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHH-c-CCCcCCC-C---CCEEEEEeCCHHHHHHHHHHHHHCC
Confidence 4445666666788876544 56788999999999999988 4 4544332 1 4456666653 23456777776 8
Q ss_pred cEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHH
Q psy8850 313 IAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (397)
Q Consensus 313 i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 369 (397)
|.+.++..+.. ..+++++||+++.+++++++++++++|+++
T Consensus 344 I~v~~~~~~~~----------------~~~~~~lRis~~~~~~~~~i~~~l~~l~~~ 384 (385)
T PRK05958 344 FWVGAIRPPTV----------------PAGTSRLRITLTAAHTEADIDRLLEALAEA 384 (385)
T ss_pred ceEecccCCCC----------------CCCCceEEEEecCCCCHHHHHHHHHHHHhc
Confidence 88876422110 012378999999889999999999999875
No 129
>PRK08175 aminotransferase; Validated
Probab=99.96 E-value=1.9e-27 Score=224.18 Aligned_cols=317 Identities=15% Similarity=0.135 Sum_probs=218.5
Q ss_pred CCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHh----C--CCCC-cEEEeCChhHHHHHHHHHhHhh
Q psy8850 9 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLI----Y--ADPR-EIIWTSGATESNNLAIKGAAHF 81 (397)
Q Consensus 9 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~--~~~~-~i~~~~g~t~a~~~~l~~l~~~ 81 (397)
+++.+.+++.+.+... ... .| .......++++++++++ | ++++ ++++|+|+++++.+++..+.
T Consensus 43 ~~~~~~~~~~~~~~~~---~~~-~Y----~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~-- 112 (395)
T PRK08175 43 TPPHIVEKLCEVAQRP---DTH-GY----STSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEGLAHLMLATL-- 112 (395)
T ss_pred CCHHHHHHHHHHHhCC---CcC-CC----CCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhC--
Confidence 3556777766655321 001 12 22233455666666654 4 3555 79999999999999988887
Q ss_pred hccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhc---CCceEEEEecccCcccccccH---
Q psy8850 82 YKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKIC---SDTILVSVMLVNNEIGVIQPI--- 155 (397)
Q Consensus 82 ~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~---~~~~~v~~~~~~~~tG~~~~l--- 155 (397)
++||+|++++|+|+.+...+... |.+++.++.+.++. +.++++++++ .+++++++++|+||||.+++.
T Consensus 113 --~~gd~Vlv~~P~y~~~~~~~~~~---g~~~~~v~~~~~~~-~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~~ 186 (395)
T PRK08175 113 --DHGDTVLVPNPSYPIHIYGAVIA---GAQVRSVPLVEGVD-FFNELERAIRESYPKPKMMILGFPSNPTAQCVELEFF 186 (395)
T ss_pred --CCCCEEEEcCCCCcchHHHHHHc---CCeEEEEecccCCC-cHHHHHHHHhhccCCceEEEEeCCCCCCCCCCCHHHH
Confidence 79999999999999988877766 99999999876542 5888988876 378999999999999999996
Q ss_pred HHHHHHHHhcCcEEEEecccccCc----cccccCc----ccccEEEeccccccCCCC--ceEEEEecCCCCccccccccC
Q psy8850 156 LEIGELCRSKGVIFHCDAAQAVGK----IDINIQN----YKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGG 225 (397)
Q Consensus 156 ~~i~~l~~~~gi~livD~a~~~~~----~~~~~~~----~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~ 225 (397)
++|+++|++||+++|+|++|+... .+..+.. .+..+++.|++|.+|.+| +|+++.+++....+......
T Consensus 187 ~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~~~~l~~~~~~~~~~- 265 (395)
T PRK08175 187 EKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVGNPELVSALARIKSY- 265 (395)
T ss_pred HHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhheeeeCCHHHHHHHHHHHhh-
Confidence 688999999999999999986321 1111111 134567899999666545 79998877655554432210
Q ss_pred CccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCC----
Q psy8850 226 GHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFI---- 301 (397)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 301 (397)
...+.. .....+...+++....++++.++.++++++++.+.|++ . ++.+..+.+ +.++++.++..
T Consensus 266 -----~~~~~~-~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~-~-~~~~~~p~~---g~~i~i~l~~~~~~~ 334 (395)
T PRK08175 266 -----HDYGTF-TPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHE-A-GWMVEMPKA---SMYVWAKIPEPYAAM 334 (395)
T ss_pred -----cccCCC-cHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH-c-CCcccCCCE---EEEEEEECCcccCCC
Confidence 011222 22333333455433445777888999999999999998 5 555443322 45667777642
Q ss_pred ChHHHHHHh-C--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHH
Q psy8850 302 EGESLLMAI-K--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKK 372 (397)
Q Consensus 302 ~~~~~~~~l-~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 372 (397)
++.++...+ . ||.+.+|..|.. ...+++||++. .+.+.+++++++|.+++.+
T Consensus 335 ~~~~~~~~l~~~~gv~v~p~~~f~~-----------------~~~~~lRis~~--~~~~~~~~al~~l~~~l~~ 389 (395)
T PRK08175 335 GSLEFAKKLLNEAKVCVSPGIGFGD-----------------YGDTHVRFALI--ENRDRIRQAIRGIKAMFRA 389 (395)
T ss_pred CHHHHHHHHHHhCCEEEeCchhhCc-----------------CCCCeEEEEeC--CCHHHHHHHHHHHHHHHHh
Confidence 356776654 2 999999865532 11368999997 4789999999999888864
No 130
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=3.2e-27 Score=220.78 Aligned_cols=306 Identities=14% Similarity=0.103 Sum_probs=215.7
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCC
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGK 87 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~ 87 (397)
.+++.+.+++.+.......++. ... .++++++++++++++++|++|+|+++++..++.++. ++||
T Consensus 49 ~~~~~~~~al~~~~~~~~~Y~~----------~~g-~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~~~----~~gd 113 (371)
T PRK05166 49 GPSPAVRRAFADIAELLRLYPD----------PQG-RALREAIAARTGVPADRIILGNGSEDLIAVICRAVL----RPGD 113 (371)
T ss_pred CCCHHHHHHHHHHHHHhhcCCC----------CcH-HHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHhc----CCCC
Confidence 4677888888765433221111 122 378999999999988899999999999999999887 7999
Q ss_pred EEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHh--c
Q psy8850 88 HIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRS--K 165 (397)
Q Consensus 88 ~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~--~ 165 (397)
+|++..|+|+.+...++.. |.+++.++.++++.+|+++++++++++++++++++++||||.++|.+++.++++. +
T Consensus 114 ~vli~~P~y~~~~~~~~~~---g~~~~~v~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~ 190 (371)
T PRK05166 114 RVVTLYPSFPLHEDYPTMM---GARVERVTVTPDLGFDLDALCAAVARAPRMLMFSNPSNPVGSWLTADQLARVLDATPP 190 (371)
T ss_pred EEEEcCCChHHHHHHHHHc---CCeEEEeecCCCCCCCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCC
Confidence 9999999999887666665 9999999998777899999999998899999999999999999998776666653 4
Q ss_pred CcEEEEecccccCcc----c--ccc-Cc-ccccEEEeccccccCCCC--ceEEEEe-cCCCCccccccccCCccccccCC
Q psy8850 166 GVIFHCDAAQAVGKI----D--INI-QN-YKVDLMSFSAHKIYGPKG--IGALYIR-RNPRTRIEAQIHGGGHEYGLRSG 234 (397)
Q Consensus 166 gi~livD~a~~~~~~----~--~~~-~~-~~~d~~~~s~~K~~g~~g--~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 234 (397)
+++||+|++|..... + ... .. ....+++.|++|.+|.+| +|++++. ++..+.+...... .
T Consensus 191 ~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~~~l~~~~~~~~~~--------~- 261 (371)
T PRK05166 191 ETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSDPELVGLLDRVRTP--------F- 261 (371)
T ss_pred CcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCCHHHHHHHHHhccC--------C-
Confidence 899999999872221 1 111 11 123578999999766445 6887764 3333333222111 1
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCChHHHHHHhC--C
Q psy8850 235 TLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAIK--D 312 (397)
Q Consensus 235 ~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~ 312 (397)
..+.....++.+++.. .+.+++..+.+.++++++.+.|++ . ++.+. ++. +.++++.++ .+..++.+.|. |
T Consensus 262 ~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~-~-g~~~~-p~~---g~fl~~~~~-~~~~~l~~~l~~~g 333 (371)
T PRK05166 262 NVNGAAQAAALAALDD-EEHLAKGVALALAERERLKKELAE-M-GYRIA-PSR---ANFLFFDAR-RPASAVAEALLRQG 333 (371)
T ss_pred CCCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHH-C-cCeeC-CCc---CCEEEEeCC-CCHHHHHHHHHHCC
Confidence 1233333333344432 235677778888899999999998 4 55543 222 345566654 35667777775 8
Q ss_pred cEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHH
Q psy8850 313 IAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKV 370 (397)
Q Consensus 313 i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~ 370 (397)
|.+.+|..+. ..++|||+++ +.++.+++++.|+.++
T Consensus 334 i~v~p~~~~~-------------------~~~~iRi~~~---~~~~~~~l~~~l~~i~ 369 (371)
T PRK05166 334 VIVKPWKQPG-------------------FETFIRVSIG---SPEENDHFVAALDKVL 369 (371)
T ss_pred eEEecCCCCC-------------------CCCeEEEEcC---CHHHHHHHHHHHHHHh
Confidence 9898874211 1389999998 5788999999888764
No 131
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.96 E-value=2.9e-27 Score=220.89 Aligned_cols=315 Identities=18% Similarity=0.150 Sum_probs=221.7
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCC
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGK 87 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~ 87 (397)
+.++.+++++.+++..+. .... .+...+...+...++++.++++++.+ +.+++++| ++++..++.++. ++||
T Consensus 30 ~~~~~v~~a~~~~~~~~~-~~~~-~~~~~~g~~~~~~~l~~~la~~~~~~-~~i~~~~G-~~~~~~~l~~~~----~~gd 101 (360)
T TIGR00858 30 ASHPEVIQAAQQGAEQYG-AGST-ASRLVSGNSPLHEELEEELAEWKGTE-AALLFSSG-YLANVGVISALV----GKGD 101 (360)
T ss_pred CCCHHHHHHHHHHHHhcC-CCCC-CcCcccCCcHHHHHHHHHHHHHhCCC-CEEEECch-HHHHHHHHHHhC----CCCC
Confidence 356899999999886532 2111 12111222356788999999999864 45666665 566666677665 7899
Q ss_pred EEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcC----CceEEEEecccCcccccccHHHHHHHHH
Q psy8850 88 HIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS----DTILVSVMLVNNEIGVIQPILEIGELCR 163 (397)
Q Consensus 88 ~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~----~~~~v~~~~~~~~tG~~~~l~~i~~l~~ 163 (397)
+|++.+++|+++...+... |.++..++. +|++++++++++ +++++++++++|++|...|+++|.++|+
T Consensus 102 ~v~~~~~~~~~~~~~~~~~---g~~~~~~~~-----~d~~~l~~~~~~~~~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~ 173 (360)
T TIGR00858 102 LILSDALNHASLIDGCRLS---GARVRRYRH-----NDVEHLERLLEKNRGERRKLIVTDGVFSMDGDIAPLPQLVALAE 173 (360)
T ss_pred EEEEEccccHHHHHHHHhc---CCceEEecC-----CCHHHHHHHHHHcccCCCeEEEEeCCccCCCCCcCHHHHHHHHH
Confidence 9999999999998877765 888887764 488999998864 4789999999999999999999999999
Q ss_pred hcCcEEEEecccccCccccc---------cCcccccEEEeccccccCCCCceEEEEecCCCCccccccccCCccccccCC
Q psy8850 164 SKGVIFHCDAAQAVGKIDIN---------IQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSG 234 (397)
Q Consensus 164 ~~gi~livD~a~~~~~~~~~---------~~~~~~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (397)
++|+++|+|++|+.+....+ +...+.|+++.|++|.+|+.| |+++.+++....+...... ..+ .+
T Consensus 174 ~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~g-G~~~~~~~~~~~~~~~~~~----~~~-~~ 247 (360)
T TIGR00858 174 RYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGSYG-AYVAGSQALIDYLINRART----LIF-ST 247 (360)
T ss_pred HcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhhccC-cEEEcCHHHHHHHHHhCcc----cee-cC
Confidence 99999999999986543211 112257899999999777776 8888876554444322111 001 12
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecC-CChHHHHHHhC--
Q psy8850 235 TLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF-IEGESLLMAIK-- 311 (397)
Q Consensus 235 ~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~-- 311 (397)
..+...+++..++++.... .++..+++.++++++.+.|++ + ++.+..+ . ..++++.++. .+..++.+.|.
T Consensus 248 ~~~~~~~~a~~~al~~~~~-~~~~~~~~~~~~~~l~~~L~~-~-~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~l~~~ 320 (360)
T TIGR00858 248 ALPPAVAAAALAALELIQE-EPWRREKLLALIARLRAGLEA-L-GFTLMPS-C---TPIVPVIIGDNASALALAEELQQQ 320 (360)
T ss_pred CCCHHHHHHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHHHH-c-CCccCCC-C---CCEEEEEeCCHHHHHHHHHHHHHC
Confidence 2344555666677776543 356789999999999999998 5 4554422 2 3466666653 23556776665
Q ss_pred CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHH
Q psy8850 312 DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLK 367 (397)
Q Consensus 312 ~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~ 367 (397)
||.+.++..+.. ...++++|++++.+++++++++++++|+
T Consensus 321 gI~v~~~~~~~~----------------~~~~~~iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 321 GIFVGAIRPPTV----------------PAGTSRLRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred CeeEeeeCCCCC----------------CCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence 888876533221 0123689999999999999999999874
No 132
>PLN02721 threonine aldolase
Probab=99.96 E-value=1.6e-27 Score=221.93 Aligned_cols=312 Identities=15% Similarity=0.176 Sum_probs=208.2
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhcc-CC
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKK-RG 86 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~-~g 86 (397)
.+++.+++++.+.. . + .. .+.+ .+...++++.++++++.+ .++++++|++++..++.++. + +|
T Consensus 17 ~~~~~~~~a~~~~~---~-~-~~-~~~~----~~~~~~l~~~la~~~~~~--~~~~~~~Gs~a~~~~l~~~~----~~~g 80 (353)
T PLN02721 17 KPTDAMRAAMANAE---V-D-DD-VLGY----DPTALRLEEEMAKIFGKE--AALFVPSGTMGNLISVLVHC----DVRG 80 (353)
T ss_pred CCCHHHHHHHHhcc---C-C-Cc-ccCC----CHHHHHHHHHHHHHhCCc--eeEEecCccHHHHHHHHHHc----cCCC
Confidence 56788888876531 1 1 11 1111 223688999999999986 46777888888777777665 5 89
Q ss_pred CEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhc-------CCceEEEEecc-cCccccccc---H
Q psy8850 87 KHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKIC-------SDTILVSVMLV-NNEIGVIQP---I 155 (397)
Q Consensus 87 ~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~-------~~~~~v~~~~~-~~~tG~~~~---l 155 (397)
|+|++++++|.+...........|.+++.+|.++++.+|+++++++++ +++++|+++++ +||+|..+| +
T Consensus 81 d~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l 160 (353)
T PLN02721 81 SEVILGDNSHIHLYENGGISTLGGVHPRTVKNNEDGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYT 160 (353)
T ss_pred CeEEEcCccceehhcccchhhhcCceeEecCCCcCCCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHH
Confidence 999999999876665211222338999999988888899999999998 58899999775 577898887 6
Q ss_pred HHHHHHHHhcCcEEEEecccccCcc-----ccccCcccccEEEeccccccCCCCceEEEEecCCCCccccccccCCcccc
Q psy8850 156 LEIGELCRSKGVIFHCDAAQAVGKI-----DINIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGHEYG 230 (397)
Q Consensus 156 ~~i~~l~~~~gi~livD~a~~~~~~-----~~~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 230 (397)
++|.++|+++|+++|+|+++.++.. ..+....++|+++.|+||+++++..++++.+++....+.......
T Consensus 161 ~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~~G~~~~~~~~~~~~~~~~~~~~----- 235 (353)
T PLN02721 161 DKVGELAKRHGLKLHIDGARIFNASVALGVPVHRLVKAADSVSVCLSKGLGAPVGSVIVGSKSFIRKAKRLRKTL----- 235 (353)
T ss_pred HHHHHHHHHcCCEEEEEchhhhcchhhhCCCHHHHhhhCCEEEEecccccCCceeeEEecCHHHHHhHHHHHHhc-----
Confidence 7999999999999999999875431 111112267889999999554432244556655544433222110
Q ss_pred ccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEE-eCCCCCCCCceEEEEecC---CChHHH
Q psy8850 231 LRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYI-NGDMNNRIPHNLNISFNF---IEGESL 306 (397)
Q Consensus 231 ~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~ 306 (397)
.+.+......+. +++..+.+.... .++..++++++.+.|++ ++++.+ ...+. .+++++.++. .+...+
T Consensus 236 --~~~~~~~~~~~~-~~~~~l~~~~~~-~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 307 (353)
T PLN02721 236 --GGGMRQVGVLAA-AALVALQENVPK-LEDDHKKAKLLAEGLNQ-IKGLRVNVAAVE---TNIVYFDITDGSRITAEKL 307 (353)
T ss_pred --CCCeehhHHHHH-HHHHHHHHHHHH-HHHHHHHHHHHHHHHHh-CCCcEEecCCcc---ceEEEEEccCCccccHHHH
Confidence 111111111211 122222222222 33345678899999988 777754 33322 4566777764 356677
Q ss_pred HHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHH
Q psy8850 307 LMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVK 371 (397)
Q Consensus 307 ~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 371 (397)
.+.|. ++.+.++. ..++|++++..++++|+++++++|++++.
T Consensus 308 ~~~L~~~gi~v~~~~-----------------------~~~lR~~~~~~~~~~~i~~~~~~l~~~~~ 351 (353)
T PLN02721 308 CKSLEEHGVLLMPGN-----------------------SSRIRVVTHHQISDSDVQYTLSCFQQAAL 351 (353)
T ss_pred HHHHHhCCcEEecCC-----------------------CceEEEEecCcCCHHHHHHHHHHHHHHhh
Confidence 77776 78887651 26899999988999999999999998765
No 133
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.96 E-value=7.3e-28 Score=228.37 Aligned_cols=302 Identities=16% Similarity=0.185 Sum_probs=212.0
Q ss_pred HHHHHHHHHHHHHhC--------CCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHHhhCCcE
Q psy8850 41 KAIEKARNEVAQLIY--------ADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFR 112 (397)
Q Consensus 41 ~~~~~~~~~la~~~~--------~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~ 112 (397)
.+...+|++++++++ +++++|++|+|+++|+.+++.+++ ++||.|+++.|.|+.+...+.. +.|.+
T Consensus 95 ~G~~~LR~aiA~~l~~~~~~~~~v~p~~Ivit~G~t~al~~l~~~l~----~pGD~Vlv~~P~Y~~f~~~~~~--~~g~~ 168 (447)
T PLN02607 95 HGLKSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILA----DPGDALLVPTPYYPGFDRDLRW--RTGVK 168 (447)
T ss_pred cchHHHHHHHHHHHHHhcCCCCCcCHHHeEEcCChHHHHHHHHHHhC----CCCCEEEEcCCCCcchHHHHHh--cCCcE
Confidence 345667777777664 567789999999999999999888 8999999999999999876552 23889
Q ss_pred EEEeccCC--CCCCCHHHHHHHhcC------CceEEEEecccCccccccc---HHHHHHHHHhcCcEEEEecccccCcc-
Q psy8850 113 VTYLKPKN--NGLITLSQLEEKICS------DTILVSVMLVNNEIGVIQP---ILEIGELCRSKGVIFHCDAAQAVGKI- 180 (397)
Q Consensus 113 v~~v~~~~--~~~~d~~~l~~~i~~------~~~~v~~~~~~~~tG~~~~---l~~i~~l~~~~gi~livD~a~~~~~~- 180 (397)
++.|+++. ++.+|++++++++++ +++++++++|+||||.++| +++|+++|++||+.+|+|++|+....
T Consensus 169 vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~ 248 (447)
T PLN02607 169 IVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFS 248 (447)
T ss_pred EEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccC
Confidence 99998873 346899999998864 7899999999999999999 57788999999999999999974221
Q ss_pred --c-cccC---------c-ccccEEEeccccccCCCC--ceEEEEecC-CCCccccccccCCccccccCCCCchhHHHHH
Q psy8850 181 --D-INIQ---------N-YKVDLMSFSAHKIYGPKG--IGALYIRRN-PRTRIEAQIHGGGHEYGLRSGTLATHQIVGM 244 (397)
Q Consensus 181 --~-~~~~---------~-~~~d~~~~s~~K~~g~~g--~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 244 (397)
+ .++. . ....+++.|++|.+|.+| +|+++..++ ....+.... . .+..+......+
T Consensus 249 ~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~GlRvG~ivs~n~~l~~~~~~~~-~--------~~~~s~~~q~~~ 319 (447)
T PLN02607 249 ASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMS-S--------FTLVSSQTQHLL 319 (447)
T ss_pred CCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCcceEEEEEEcCHHHHHHHHHHh-h--------cCCCCHHHHHHH
Confidence 1 1110 1 123477899999666445 688887422 222221111 0 111222233333
Q ss_pred HHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCC------C-hHHHHHHh-C--
Q psy8850 245 GEAFR---LARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFI------E-GESLLMAI-K-- 311 (397)
Q Consensus 245 ~~al~---~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-~~~~~~~l-~-- 311 (397)
...++ +....+...++++.+.++.+.+.|++ .++.+..+.. +.++++.++.. + ..++.+.+ .
T Consensus 320 ~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~--~gi~~~~~~a---g~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~ 394 (447)
T PLN02607 320 ASMLSDEEFTENYIRTNRERLRKRYEMIVQGLRR--AGIECLKGNA---GLFCWMNLSPLLETPTREGELALWDSILREV 394 (447)
T ss_pred HHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHh--CCCCcccCCe---eEEEEEEchHhhcCCCchhHHHHHHHHHHhC
Confidence 34443 22334667788888899999999988 3655544322 45667776531 1 23455444 2
Q ss_pred CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHHHhcCccc
Q psy8850 312 DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKLRELSPLW 380 (397)
Q Consensus 312 ~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~ 380 (397)
||.+.+|..|.. ...+++||+++. .+++++++.+++|.+++++.+.++.|+
T Consensus 395 gV~v~pG~~f~~-----------------~~~g~fRi~fa~-~~~~~l~~gl~Ri~~~l~~~~~~~~~~ 445 (447)
T PLN02607 395 KLNISPGSSCHC-----------------SEPGWFRVCFAN-MSEDTLEVALKRIHRFMDRRKTASSQQ 445 (447)
T ss_pred CEEEcCccccCC-----------------CCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHHHhhhhhc
Confidence 899999976543 013899999996 468999999999999999888766554
No 134
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.96 E-value=5.6e-27 Score=217.46 Aligned_cols=305 Identities=16% Similarity=0.161 Sum_probs=219.4
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCC
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGK 87 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~ 87 (397)
.+|+.+.+++.+.+.....+|. ....++|+++++++++++++|++|+|+++++..++.++ .+ +
T Consensus 32 ~~p~~~~~a~~~~~~~~~~Y~~-----------~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~~~-----~~-~ 94 (354)
T PRK06358 32 GVPESLKQAITENLDKLVEYPD-----------PDYLELRKRIASFEQLDLENVILGNGATELIFNIVKVT-----KP-K 94 (354)
T ss_pred CCCHHHHHHHHHHHHhhhcCCC-----------ccHHHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHHh-----CC-C
Confidence 3578899998887654221111 13578999999999999999999999999999998875 24 5
Q ss_pred EEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCC--CCCCHHHHHHHhcCCceEEEEecccCccccccc---HHHHHHHH
Q psy8850 88 HIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNN--GLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---ILEIGELC 162 (397)
Q Consensus 88 ~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~--~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~---l~~i~~l~ 162 (397)
.|++..|.|+.+...+... |.+++.++.+.+ +.+| +++.+.+.++++++++++|+||||.+++ +++|+++|
T Consensus 95 ~v~i~~P~y~~~~~~~~~~---g~~~~~~~~~~~~~~~~d-~~~~~~~~~~~~~v~~~~P~NPtG~~~~~~~~~~l~~~a 170 (354)
T PRK06358 95 KVLILAPTFAEYERALKAF---DAEIEYAELTEETNFAAN-EIVLEEIKEEIDLVFLCNPNNPTGQLISKEEMKKILDKC 170 (354)
T ss_pred cEEEecCChHHHHHHHHHc---CCeeEEEeCccccCCCcc-HHHHHhhccCCCEEEEeCCCCCCCCccCHHHHHHHHHHH
Confidence 7999999999998777666 999999998743 4678 6666677778999999999999999998 57788889
Q ss_pred HhcCcEEEEecccccCcc---ccc----cCcccccEEEeccccccCCCC--ceEEEEec-CCCCccccccccCCcccccc
Q psy8850 163 RSKGVIFHCDAAQAVGKI---DIN----IQNYKVDLMSFSAHKIYGPKG--IGALYIRR-NPRTRIEAQIHGGGHEYGLR 232 (397)
Q Consensus 163 ~~~gi~livD~a~~~~~~---~~~----~~~~~~d~~~~s~~K~~g~~g--~g~~~~~~-~~~~~~~~~~~~~~~~~~~~ 232 (397)
++||+++|+|++|.-... +.. ....+..+++.|++|.+|.+| +|++++++ .....+.....
T Consensus 171 ~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~~~~~~~~~~~~~--------- 241 (354)
T PRK06358 171 EKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSNKNLAEKLLQMRE--------- 241 (354)
T ss_pred HhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhCC---------
Confidence 999999999999862211 111 112235588899999766445 78888753 33333333221
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCChHHHHHHhC-
Q psy8850 233 SGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAIK- 311 (397)
Q Consensus 233 ~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~- 311 (397)
....+.....+...+++. ...+++..+.++++++++.+.|++ ++++.+..+. ++++++.++. ..++.+.|.
T Consensus 242 ~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~-~~~~~~~~~~----g~f~~~~~~~--~~~~~~~l~~ 313 (354)
T PRK06358 242 PWSINTFADLAGQTLLDD-KEYIKKTIQWIKEEKDFLYNGLSE-FKGIKVYKPS----VNFIFFKLEK--PIDLRKELLK 313 (354)
T ss_pred CCcchHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHhc-CCCcEEcCCc----ceEEEEEcCc--hHHHHHHHHH
Confidence 123344444444455532 124567788889999999999988 7776666442 3456666653 356766665
Q ss_pred -CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHH
Q psy8850 312 -DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKV 370 (397)
Q Consensus 312 -~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~ 370 (397)
||.+.+|..|.. ...++|||+++ +.+++++++++|.+++
T Consensus 314 ~gI~v~~~~~f~~-----------------~~~~~iRls~~---~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 314 KGILIRSCSNYRG-----------------LDENYYRVAVK---SREDNKKLLKALEVIL 353 (354)
T ss_pred CCeEEEECCCCCC-----------------CCCCEEEEEeC---CHHHHHHHHHHHHHHh
Confidence 999999876532 11378999997 6899999999998765
No 135
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.96 E-value=6.3e-28 Score=225.54 Aligned_cols=286 Identities=20% Similarity=0.200 Sum_probs=215.9
Q ss_pred HHHHHHHHHHHHHHhC------CCCC-cEEEeCChhHHHHHHHHHh-HhhhccCCCEEEEcCCCChhhHHHHHHHhhCCc
Q psy8850 40 EKAIEKARNEVAQLIY------ADPR-EIIWTSGATESNNLAIKGA-AHFYKKRGKHIITVQTEHKSVLDSIRKLENDGF 111 (397)
Q Consensus 40 ~~~~~~~~~~la~~~~------~~~~-~i~~~~g~t~a~~~~l~~l-~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~ 111 (397)
.....+++++++++++ .+++ +|++++|+++++..++..+ . ++++.|+++.|.|+.+...++.. |.
T Consensus 43 ~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~~~~~~~~~~----~~~~~vlv~~P~y~~~~~~~~~~---g~ 115 (363)
T PF00155_consen 43 PQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQAALFLLLRLLKI----NPGDTVLVPDPCYPSYIEAARLL---GA 115 (363)
T ss_dssp TTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHHHHHHHHHHS----STTSEEEEEESSSTHHHHHHHHT---TS
T ss_pred chhhHHHHHHHHHHhhhccCcccccceEEEEecccccchhhhhhcccc----cccccceecCCcccccccccccc---Cc
Confidence 4467889999999998 6777 8999999999888888877 4 68999999999999999988887 99
Q ss_pred EEEEeccC--CCCCCCHHHHHHHhcC------CceEEEEecccCcccccccHHH---HHHHHHhcCcEEEEecccccCcc
Q psy8850 112 RVTYLKPK--NNGLITLSQLEEKICS------DTILVSVMLVNNEIGVIQPILE---IGELCRSKGVIFHCDAAQAVGKI 180 (397)
Q Consensus 112 ~v~~v~~~--~~~~~d~~~l~~~i~~------~~~~v~~~~~~~~tG~~~~l~~---i~~l~~~~gi~livD~a~~~~~~ 180 (397)
++..+|++ .++.+|+++|++.+++ +++++++++++||||..++.++ |+++|++||++||+|++|+....
T Consensus 116 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~ 195 (363)
T PF00155_consen 116 EVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIF 195 (363)
T ss_dssp EEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBS
T ss_pred eeeeccccccccccccccccccccccccccccccceeeecccccccccccccccccchhhhhcccccceeeeeceecccc
Confidence 99999865 5678999999999987 6789999999999999999655 55559999999999999984332
Q ss_pred c--------cccCcccccEEEeccccccCCCC--ceEEEEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHH
Q psy8850 181 D--------INIQNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRL 250 (397)
Q Consensus 181 ~--------~~~~~~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~ 250 (397)
. ..+......+++.|++|.+|.+| +|+++++++....+......+ ..+......+...+..
T Consensus 196 ~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~~~~~~~~l~~~~~~~---------~~~~~~~~~~~~~l~~ 266 (363)
T PF00155_consen 196 GDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVAPPELIERLRRFQRSG---------LSSSPMQAAAAAALSD 266 (363)
T ss_dssp SSSHTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEEEEHHHHHHHHHHHHHT---------TSSHHHHHHHHHHHHH
T ss_pred CCCccCcccccccccccceeeeeccccccccccccccccchhhhhhhhhhccccc---------cccchhhHHHHHhhhc
Confidence 2 11122123588999999777555 799999876655554433221 1133333333334433
Q ss_pred HH---HHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCChHHHHHHhC---CcEecccCccCCC
Q psy8850 251 AR---IEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAIK---DIAVSSGSACTSA 324 (397)
Q Consensus 251 ~~---~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~i~~~~g~~~~~~ 324 (397)
.. +.+++++++++++++++.+.|.+ . ++.+..++. +.++++.++..+..++.+.|. ||.+.+|..+..
T Consensus 267 ~~~~~~~~~~~~~~l~~~~~~l~~~L~~-~-~~~~~~~~~---~~~~~~~~~~~~~~~l~~~L~~~~gi~v~pg~~~~~- 340 (363)
T PF00155_consen 267 PELVEKWLEELRERLRENRDLLREALEE-I-GITVLPPEA---GFFLWVRLDPNDAEELAQELLEEYGILVRPGSYFGV- 340 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-T-TSEEEHHSB---SSEEEEEESHHHHHHHHHHHHHHHTEEEEEGGGGTS-
T ss_pred ccccccccccchhhHHHHHHHHHHHHHH-h-hhheeeccC---ccEEEEEcccchHHHHHHHHHHhCCEEEEecCCCCC-
Confidence 32 26788999999999999999999 4 888886654 556566665444567777775 899999865543
Q ss_pred CCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHH
Q psy8850 325 SLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLL 366 (397)
Q Consensus 325 ~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l 366 (397)
.++||+++ ...+++++++++++|
T Consensus 341 ------------------~~~iRi~~-a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 341 ------------------PGYIRISL-ASHSEEDLEEALERL 363 (363)
T ss_dssp ------------------TTEEEEEG-GCSCHHHHHHHHHHH
T ss_pred ------------------CCEEEEEe-ccCCHHHHHHHHhhC
Confidence 38999999 457999999999986
No 136
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=4.9e-27 Score=219.51 Aligned_cols=308 Identities=14% Similarity=0.100 Sum_probs=217.5
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHh------CCCCCcEEEeCChhHHHHHHHHHhHh
Q psy8850 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLI------YADPREIIWTSGATESNNLAIKGAAH 80 (397)
Q Consensus 7 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~------~~~~~~i~~~~g~t~a~~~~l~~l~~ 80 (397)
.++|+.+++++.+.+....... . .|. ......+++.+++++ ++++++|++|+|+++++.+++.++.
T Consensus 38 ~~~~~~~~~al~~~l~~~~~~~-~-~Y~-----~~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l~~~~~~~~- 109 (368)
T PRK03317 38 YPPSPALVADIAEAVAEAAAGL-N-RYP-----DRDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEILQQLLQAFG- 109 (368)
T ss_pred CCCCHHHHHHHHHHHhhhhhhh-c-cCC-----CCchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHHHHHHHHhc-
Confidence 3678899999998875411110 0 121 113466778888877 4677899999999999999999988
Q ss_pred hhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcC-CceEEEEecccCcccccccHHHHH
Q psy8850 81 FYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS-DTILVSVMLVNNEIGVIQPILEIG 159 (397)
Q Consensus 81 ~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~~~tG~~~~l~~i~ 159 (397)
++||.|++..|+|+.+....... |.++..++.++++.+|++++++++.+ +++++++++|+||||.+++.+++.
T Consensus 110 ---~~gd~v~v~~P~y~~~~~~~~~~---g~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~ 183 (368)
T PRK03317 110 ---GPGRTALGFVPSYSMHPIIARGT---HTEWVEGPRAADFTLDVDAAVAAIAEHRPDVVFLTSPNNPTGTALPLDDVE 183 (368)
T ss_pred ---CCCCEEEEeCCChHHHHHHHHhc---CCeeEEcccCCCCCCCHHHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHH
Confidence 79999999999999988777655 88888888776778999999999874 788999999999999999999999
Q ss_pred HHHHhcCcEEEEecccccCcc---c--ccc-CcccccEEEeccccccCCCC--ceEEEEecCCCCccccccccCCccccc
Q psy8850 160 ELCRSKGVIFHCDAAQAVGKI---D--INI-QNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGL 231 (397)
Q Consensus 160 ~l~~~~gi~livD~a~~~~~~---~--~~~-~~~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (397)
++++..++++|+|++|+.... + ... ...+..+++.|++|.+|.+| +|+++++++....+......
T Consensus 184 ~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~~~~~~~l~~~~~~------- 256 (368)
T PRK03317 184 AILDAAPGIVVVDEAYAEFRRSGTPSALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAAPAVVDALRLVRLP------- 256 (368)
T ss_pred HHHHHCCceEEEeCCchhhcccCCcCHHHHHHhCCCEEEEEechhhhccchhhhhhhhCCHHHHHHHHhcCCC-------
Confidence 999999999999999983211 1 111 11123467789999665434 79999887665554432211
Q ss_pred cCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEE-EecCCChHHHHHHh
Q psy8850 232 RSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNI-SFNFIEGESLLMAI 310 (397)
Q Consensus 232 ~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l 310 (397)
...+.....+..++++... .+.+..+++.++++.+.+.|++ . ++.+..+. .+++.+ .+ .+...+.+.+
T Consensus 257 --~~~s~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~----~~~~~~~~~--~~~~~~~~~l 325 (368)
T PRK03317 257 --YHLSAVTQAAARAALRHAD-ELLASVAALRAERDRVVAWLRE-L-GLRVAPSD----ANFVLFGRF--ADRHAVWQGL 325 (368)
T ss_pred --CCCCHHHHHHHHHHhhCHH-HHHHHHHHHHHHHHHHHHHHHH-C-CCEeCCCC----CcEEEEecc--CCHHHHHHHH
Confidence 1233344444445665432 3344556678888889999988 4 66554432 222222 22 2456666666
Q ss_pred C--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHH
Q psy8850 311 K--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVK 371 (397)
Q Consensus 311 ~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 371 (397)
. ||.+.+.. . .+++||+++ +.+++++++++|++++.
T Consensus 326 ~~~Gv~v~~~~--~--------------------~~~iRi~~~---~~~~~~~~~~~l~~~~~ 363 (368)
T PRK03317 326 LDRGVLIRDVG--I--------------------PGWLRVTIG---TPEENDAFLAALAEVLA 363 (368)
T ss_pred HHCCEEEEeCC--C--------------------CCeEEEecC---CHHHHHHHHHHHHHHHH
Confidence 5 88876421 0 278999986 68899999999998864
No 137
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=6.4e-28 Score=223.53 Aligned_cols=281 Identities=17% Similarity=0.166 Sum_probs=205.2
Q ss_pred HHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCC-CEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCC
Q psy8850 43 IEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRG-KHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNN 121 (397)
Q Consensus 43 ~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g-~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~ 121 (397)
..++++++++++|+++++|++|+|+++++.+++.++. ++| ++|+++.|+|+.+...++.. |.+++.+|.+++
T Consensus 59 ~~~l~~~~a~~~g~~~~~I~~~~Gs~e~i~~~~~~~~----~~g~~~vli~~P~y~~y~~~~~~~---G~~~~~v~~~~~ 131 (351)
T PRK01688 59 PKAVIENYAAYAGVKPEQVLVSRGADEGIELLIRAFC----EPGKDAILYCPPTYGMYSVSAETI---GVEIRTVPTLDN 131 (351)
T ss_pred hHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhc----CCCCCEEEEcCCCHHHHHHHHHHc---CCEEEEeecCCC
Confidence 4688999999999999999999999999999999887 676 89999999999887776666 999999999877
Q ss_pred CCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHh--cCcEEEEecccccCcccc---c-cCcccccEEEec
Q psy8850 122 GLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRS--KGVIFHCDAAQAVGKIDI---N-IQNYKVDLMSFS 195 (397)
Q Consensus 122 ~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~--~gi~livD~a~~~~~~~~---~-~~~~~~d~~~~s 195 (397)
+.+|++++++++ +++++|++++|+||||.+.+.+++.++++. .+++||+|++|.-..... + ....+..+++.|
T Consensus 132 ~~~d~~~l~~~~-~~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~~f~~~~s~~~~~~~~~n~iv~rS 210 (351)
T PRK01688 132 WQLDLPAIADNL-DGVKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLVILRT 210 (351)
T ss_pred CCCCHHHHHHhc-cCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhcCCCCChHHHHhhCCCEEEEec
Confidence 889999999988 689999999999999999997776666543 268999999986322111 1 122245688999
Q ss_pred cccccCCCC--ceEEEEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Q psy8850 196 AHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLA-RIEMKEELKRILFLQKRLYNG 272 (397)
Q Consensus 196 ~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~-~~~~~~~~~~~~~~~~~l~~~ 272 (397)
++|.+|..| +|+++++++..+.+......+ ..+.....+..++++.. .+.+.+..+.+.+.++++.+.
T Consensus 211 fSK~~glaGlRiGy~i~~~~~i~~l~~~~~~~---------~v~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~ 281 (351)
T PRK01688 211 LSKAFALAGLRCGFTLANEEVINLLLKVIAPY---------PLSTPVADIAAQALSPQGIAAMRERVAEINANRQWLIAA 281 (351)
T ss_pred chHhhcCHHHHHhHHhCCHHHHHHHHhccCCC---------CCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 999777666 699998877665554432211 12222222222444421 234666777888889999999
Q ss_pred HhhhcCcEEEeCCCCCCCCceEEEEecCCChHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEee
Q psy8850 273 LMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTI 350 (397)
Q Consensus 273 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~ 350 (397)
|++ ++++....+.. ..++++.++ +..++.+.|. ||.++.+..+. | ..+++||++
T Consensus 282 L~~-~~~~~~~~ps~---~nfi~~~~~--~~~~l~~~L~~~gi~vr~~~~~~-------------~-----~~~~iRis~ 337 (351)
T PRK01688 282 LKE-IPCVEQVFDSE---TNYILARFT--ASSAVFKSLWDQGIILRDQNKQP-------------G-----LSNCLRITI 337 (351)
T ss_pred HHh-CCCCCeECCCC---CcEEEEEcC--CHHHHHHHHHHCCeEEEECCCcC-------------C-----CCCeEEEeC
Confidence 988 77764333322 445666664 4567777765 88887653221 1 137899999
Q ss_pred CCCCCHHHHHHHHHHHH
Q psy8850 351 GRFTTEKEIDFTIKLLK 367 (397)
Q Consensus 351 ~~~~~~~~i~~~~~~l~ 367 (397)
+ +.+++++++++|+
T Consensus 338 ~---~~~e~~~l~~al~ 351 (351)
T PRK01688 338 G---TREECQRVIDALR 351 (351)
T ss_pred C---CHHHHHHHHHhhC
Confidence 8 6899999999873
No 138
>PLN02231 alanine transaminase
Probab=99.96 E-value=1.1e-26 Score=223.93 Aligned_cols=327 Identities=17% Similarity=0.136 Sum_probs=219.9
Q ss_pred CCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHh----C--CCCCcEEEeCChhHHHHHHHHHhHhhh
Q psy8850 9 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLI----Y--ADPREIIWTSGATESNNLAIKGAAHFY 82 (397)
Q Consensus 9 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~--~~~~~i~~~~g~t~a~~~~l~~l~~~~ 82 (397)
.|..+++...+.+....+.. ...|....+..++|+.+++++ | +++++|++|+|+++|+.+++.++..
T Consensus 141 fp~~~i~~a~~~l~~~~~~~-----~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l~~-- 213 (534)
T PLN02231 141 FSADAIERAWQILDQIPGRA-----TGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-- 213 (534)
T ss_pred CCHHHHHHHHHHHHhcCCcc-----ccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHHHHhcc--
Confidence 35566666666665422111 112333445677777777765 4 4677999999999999999998862
Q ss_pred ccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCC--CCCCCHHHHHHHhcC------CceEEEEecccCccccccc
Q psy8850 83 KKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN--NGLITLSQLEEKICS------DTILVSVMLVNNEIGVIQP 154 (397)
Q Consensus 83 ~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~~------~~~~v~~~~~~~~tG~~~~ 154 (397)
.+||.|+++.|.|+.+...+... |.+++.++.++ ++.+|+++|++++++ +++++++.+|+||||.+++
T Consensus 214 -~~gd~Vli~~P~Y~~y~~~~~~~---g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls 289 (534)
T PLN02231 214 -SEKDGILCPIPQYPLYSASIALH---GGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVLA 289 (534)
T ss_pred -CCCCEEEEeCCCChhHHHHHHHc---CCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCC
Confidence 36899999999999999888877 89999999874 357999999999865 6899999999999999998
Q ss_pred ---HHHHHHHHHhcCcEEEEecccccCc-----cccccCcc---------c-ccEEEecccc-ccCCCC--ceEEEEe--
Q psy8850 155 ---ILEIGELCRSKGVIFHCDAAQAVGK-----IDINIQNY---------K-VDLMSFSAHK-IYGPKG--IGALYIR-- 211 (397)
Q Consensus 155 ---l~~i~~l~~~~gi~livD~a~~~~~-----~~~~~~~~---------~-~d~~~~s~~K-~~g~~g--~g~~~~~-- 211 (397)
+++|+++|++||++||+|++|.--. ....+..+ + ..+++.|++| ++|..| +|++.+.
T Consensus 290 ~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~ 369 (534)
T PLN02231 290 EENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGF 369 (534)
T ss_pred HHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEEEecC
Confidence 5678999999999999999987311 11111110 1 2366779999 666444 6888763
Q ss_pred -cCCCCccccccccCCccccccCCCCchhHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHhhhcCcE
Q psy8850 212 -RNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFR----------LARIEMKEELKRILFLQKRLYNGLMESIEEI 280 (397)
Q Consensus 212 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~----------~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 280 (397)
++..+.+..... ... .++..+..+...+++ .+.++.+++.+.++++++.+.+.|++ ++++
T Consensus 370 ~~~l~~~l~k~~~-------~~~-~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~-~~gi 440 (534)
T PLN02231 370 TSDVREQIYKVAS-------VNL-CSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNS-LEGV 440 (534)
T ss_pred CHHHHHHHHHHHh-------hhc-CCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCc
Confidence 333333322210 111 233343443334442 11223445678899999999999998 7888
Q ss_pred EEeCCCCCCCCceEE--EEecCC-----------ChHHHHHHhC---CcEecccCccCCCCCChhhHHHhhCCCccccCc
Q psy8850 281 YINGDMNNRIPHNLN--ISFNFI-----------EGESLLMAIK---DIAVSSGSACTSASLEPSYVLRALGCNDELAHS 344 (397)
Q Consensus 281 ~~~~~~~~~~~~~~~--~~~~~~-----------~~~~~~~~l~---~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~ 344 (397)
.+..+.+ +..++ +.++.. +...+...|. ||++.||..|... .+..
T Consensus 441 ~~~~p~G---gfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~----------------~g~~ 501 (534)
T PLN02231 441 TCNKAEG---AMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQV----------------PGTW 501 (534)
T ss_pred eecCCCe---eeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCC----------------CCCC
Confidence 7765543 23333 222211 1222333332 9999999876530 1135
Q ss_pred eEEEeeCCCCCHHHHHHHHHHHHHHHHHHHhc
Q psy8850 345 SIRFTIGRFTTEKEIDFTIKLLKMKVKKLREL 376 (397)
Q Consensus 345 ~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~ 376 (397)
++|+++. .++++++..+++|.+++++.-++
T Consensus 502 ~~Rit~~--~~~e~l~eal~RL~~~~~~~~~~ 531 (534)
T PLN02231 502 HFRCTIL--PQEDKIPAIVSRLTEFHKSFMDE 531 (534)
T ss_pred eEEEEeC--CCHHHHHHHHHHHHHHHHHHHHH
Confidence 6999985 58999999999999988776543
No 139
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.96 E-value=3.7e-27 Score=219.27 Aligned_cols=289 Identities=20% Similarity=0.208 Sum_probs=214.6
Q ss_pred HHHHHHHHHHHHhCCC------CCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEE
Q psy8850 42 AIEKARNEVAQLIYAD------PREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTY 115 (397)
Q Consensus 42 ~~~~~~~~la~~~~~~------~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~ 115 (397)
...++++.++++++.. ++++++++|+++++..++.++. ++|++|+++.++|+++...++.. |.+++.
T Consensus 37 ~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~----~~g~~vl~~~~~~~~~~~~~~~~---~~~~~~ 109 (350)
T cd00609 37 GLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALL----NPGDEVLVPDPTYPGYEAAARLA---GAEVVP 109 (350)
T ss_pred CcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhC----CCCCEEEEcCCCchhHHHHHHHC---CCEEEE
Confidence 4555666666666543 5679999999999999999887 78999999999999999888776 899999
Q ss_pred eccCCCCCCCH--HHHHHHhcCCceEEEEecccCcccccccHHHH---HHHHHhcCcEEEEecccccCccc-------cc
Q psy8850 116 LKPKNNGLITL--SQLEEKICSDTILVSVMLVNNEIGVIQPILEI---GELCRSKGVIFHCDAAQAVGKID-------IN 183 (397)
Q Consensus 116 v~~~~~~~~d~--~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i---~~l~~~~gi~livD~a~~~~~~~-------~~ 183 (397)
++.++++..+. +.++..+.+++++|++++++||+|.+.|++++ .++|+++|+++|+|++++.+... ..
T Consensus 110 i~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~ 189 (350)
T cd00609 110 VPLDEEGGFLLDLELLEAAKTPKTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELVYDGEPPPALAL 189 (350)
T ss_pred EecccccCCccCHHHHHhhcCccceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhhceeCCcccccccC
Confidence 99987776665 67777778899999999999999999996654 58999999999999999854321 12
Q ss_pred cCcccccEEEeccccccC--CCCceEEEEec-CCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHH
Q psy8850 184 IQNYKVDLMSFSAHKIYG--PKGIGALYIRR-NPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELK 260 (397)
Q Consensus 184 ~~~~~~d~~~~s~~K~~g--~~g~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~ 260 (397)
....+.|+++.|++|.++ +.++|++++++ +....+..... +..++++.....++..+++...+++++..+
T Consensus 190 ~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 262 (350)
T cd00609 190 LDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLKKLLP-------YTTSGPSTLSQAAAAAALDDGEEHLEELRE 262 (350)
T ss_pred cCccCcEEEEeecccccCCcccceEEEecCHHHHHHHHHHHHH-------hcccCCChHHHHHHHHHHhCcHHHHHHHHH
Confidence 334467899999999443 44589999887 44444433221 223456667777777777765567888899
Q ss_pred HHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCC-ChHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCC
Q psy8850 261 RILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFI-EGESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGC 337 (397)
Q Consensus 261 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~ 337 (397)
++.++++++.+.|++ .+...+..+ ..+.++++.++.. +...+.+.+. ++.+.++..+..
T Consensus 263 ~~~~~~~~l~~~L~~-~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~~~~~~-------------- 324 (350)
T cd00609 263 RYRRRRDALLEALKE-LGPLVVVKP---SGGFFLWLDLPEGDDEEFLERLLLEAGVVVRPGSAFGE-------------- 324 (350)
T ss_pred HHHHHHHHHHHHHHh-cCCccccCC---CccEEEEEecCCCChHHHHHHHHHhCCEEEeccccccc--------------
Confidence 999999999999998 554432111 2245556666543 3444555554 788887654431
Q ss_pred CccccCceEEEeeCCCCCHHHHHHHHHHHH
Q psy8850 338 NDELAHSSIRFTIGRFTTEKEIDFTIKLLK 367 (397)
Q Consensus 338 ~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~ 367 (397)
..+.++|+++... .+|+++++++|+
T Consensus 325 ---~~~~~iRi~~~~~--~~~i~~~~~al~ 349 (350)
T cd00609 325 ---GGEGFVRLSFATP--EEELEEALERLA 349 (350)
T ss_pred ---CCCCeEEEEeeCC--HHHHHHHHHHhh
Confidence 1248999999985 999999999986
No 140
>PLN02483 serine palmitoyltransferase
Probab=99.96 E-value=1.5e-26 Score=221.74 Aligned_cols=325 Identities=16% Similarity=0.160 Sum_probs=220.2
Q ss_pred CCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCE
Q psy8850 9 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKH 88 (397)
Q Consensus 9 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~ 88 (397)
+++.+.+++.+++.++..... .....+...+...++++.+++++|.+ +.+++++ |..++..++.++. ++||+
T Consensus 116 ~~~~~~~~~~~ai~~~g~~~~--~sr~~~g~~~~~~ele~~lA~~~g~~-~ai~~~~-G~~an~~~i~al~----~~Gd~ 187 (489)
T PLN02483 116 ADEYCTPRVIESLKKYSASTC--SSRVDGGTTKLHRELEELVARFVGKP-AAIVFGM-GYATNSTIIPALI----GKGGL 187 (489)
T ss_pred CCHHHHHHHHHHHHHhCCCCC--ccccccCCcHHHHHHHHHHHHHhCCC-cEEEECC-HHHHHHHHHHHhC----CCCCE
Confidence 344555555555555321111 22222344668899999999999965 4566655 5566777777777 89999
Q ss_pred EEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhc-------CCc-----e-EEEEecccCcccccccH
Q psy8850 89 IITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKIC-------SDT-----I-LVSVMLVNNEIGVIQPI 155 (397)
Q Consensus 89 vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~-------~~~-----~-~v~~~~~~~~tG~~~~l 155 (397)
|++++++|+++...+... |++++.++.+ |.+++++++. +++ + +|+++...|++|.+.++
T Consensus 188 Vi~d~~~h~s~~~~~~~~---Ga~v~~~~~~-----d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~~l 259 (489)
T PLN02483 188 IISDSLNHNSIVNGARGS---GATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELCKL 259 (489)
T ss_pred EEEcchhhHHHHHHHHHc---CCeEEEEeCC-----CHHHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCcccCH
Confidence 999999999998877665 9999999865 5666666553 222 4 66777788999999999
Q ss_pred HHHHHHHHhcCcEEEEecccccCccc---------cccCcccccEEEeccccccCCCCceEEEEecCCCCccccccccCC
Q psy8850 156 LEIGELCRSKGVIFHCDAAQAVGKID---------INIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGG 226 (397)
Q Consensus 156 ~~i~~l~~~~gi~livD~a~~~~~~~---------~~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~~~~~~~~~ 226 (397)
++|+++|++||+++|+|++|+.+... .+....+.|+++.|++|.+|+.| |+++++++.++.+.....+.
T Consensus 260 ~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~~G-G~i~~~~~li~~l~~~~~~~- 337 (489)
T PLN02483 260 PEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSCG-GYIAGSKELIQYLKRTCPAH- 337 (489)
T ss_pred HHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhcccCc-eEEEcCHHHHHHHHHhCccc-
Confidence 99999999999999999999854321 12222257999999999778776 99988877666655432210
Q ss_pred ccccccCCCCchhHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEec-C
Q psy8850 227 HEYGLRSGTLATHQIVGMGEAFRLARI-----EMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN-F 300 (397)
Q Consensus 227 ~~~~~~~~~~~~~~~~~l~~al~~~~~-----~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 300 (397)
...+..+.....+..++++.+.. ...+..++++++++++++.|++ + ++.+.++.. ...+.+.+. .
T Consensus 338 ----~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~-~-G~~v~~~~~---sp~~~l~l~~~ 408 (489)
T PLN02483 338 ----LYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQK-M-GFEVLGDND---SPVMPIMLYNP 408 (489)
T ss_pred ----cccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHH-C-CCcccCCCC---CCEEEEEECCH
Confidence 01122333444445567776542 2345678899999999999999 4 666654432 223333332 1
Q ss_pred CChHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHHHhc
Q psy8850 301 IEGESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKLREL 376 (397)
Q Consensus 301 ~~~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~ 376 (397)
....++.+.|. ||.+.+..+... +...+.+||+++..++++||++++++|+++.+.+.-+
T Consensus 409 ~~~~~~~~~Ll~~GI~v~~~~fp~~----------------p~~~~~vRi~isa~~t~edId~~l~~L~~~~~~~~~~ 470 (489)
T PLN02483 409 AKIPAFSRECLKQNVAVVVVGFPAT----------------PLLLARARICISASHSREDLIKALEVISEVGDLVGIK 470 (489)
T ss_pred HHHHHHHHHHHHCCcEEeeeCCCCC----------------CCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHhCce
Confidence 23345666654 888875322111 1123679999999899999999999999998766443
No 141
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.96 E-value=6.3e-27 Score=221.54 Aligned_cols=319 Identities=16% Similarity=0.146 Sum_probs=223.7
Q ss_pred CCHHHHHHHHHHHhhcc-CCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCC
Q psy8850 9 IDPRVVDKMIPYLRVQF-GNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGK 87 (397)
Q Consensus 9 ~~~~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~ 87 (397)
+++.+.+++.+.+.... ..+. +.......+...++++.++++++.+ ++|++++| ++++..++.++. ++||
T Consensus 57 ~~~~i~~a~~~~~~~~~~~~~~---~~~~~G~~~l~~~l~~~la~~~g~~-~~i~~tsG-~~a~~~~~~~l~----~~gd 127 (397)
T PRK06939 57 NHPELIAAAKAALDSHGFGMAS---VRFICGTQDLHKELEEKLAKFLGTE-DAILYSSC-FDANGGLFETLL----GKED 127 (397)
T ss_pred CCHHHHHHHHHHHHHcCCCCcc---cccccCCcHHHHHHHHHHHHHhCCC-cEEEEcCh-HHHHHHHHHHhC----CCCC
Confidence 68899999999886621 1111 1111123457788999999999976 56777666 788888888876 8999
Q ss_pred EEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcC------CceEEEEecccCcccccccHHHHHHH
Q psy8850 88 HIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS------DTILVSVMLVNNEIGVIQPILEIGEL 161 (397)
Q Consensus 88 ~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~------~~~~v~~~~~~~~tG~~~~l~~i~~l 161 (397)
+|++++++|+++...+... |.++..++. +|++++++++++ ++++|+..+.+|++|...++++|.++
T Consensus 128 ~vi~~~~~~~~~~~~~~~~---~~~~~~~~~-----~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~~~~l~~l 199 (397)
T PRK06939 128 AIISDALNHASIIDGVRLC---KAKRYRYAN-----NDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAPLPEICDL 199 (397)
T ss_pred EEEEEhhhhHHHHHHHHhc---CCceEEeCC-----CCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCCHHHHHHH
Confidence 9999999999998887766 777777764 488899888763 67888888899999999999999999
Q ss_pred HHhcCcEEEEecccccCcccc------ccCc--ccccEEEecccc-ccCCCCceEEEEecCCCCccccccccCCcccccc
Q psy8850 162 CRSKGVIFHCDAAQAVGKIDI------NIQN--YKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLR 232 (397)
Q Consensus 162 ~~~~gi~livD~a~~~~~~~~------~~~~--~~~d~~~~s~~K-~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (397)
|++||++||+|++|+.+.... .... .++|++++|+|| +.|+. +|+++++++..+.+....... ..
T Consensus 200 a~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~g~r-~G~v~~~~~~~~~l~~~~~~~-----~~ 273 (397)
T PRK06939 200 ADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALGGAS-GGYTAGRKEVIDWLRQRSRPY-----LF 273 (397)
T ss_pred HHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhCccC-ceEEEeCHHHHHHHHHhCccc-----cc
Confidence 999999999999997543211 1111 146899999999 54664 599998876655554321110 11
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecC-CChHHHHHHhC
Q psy8850 233 SGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF-IEGESLLMAIK 311 (397)
Q Consensus 233 ~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~ 311 (397)
.++++...+.++.++++.+.. ..++.+++.++++++.+.|++ + ++.+..+ . ..++.+.++. .+..++.+.|.
T Consensus 274 ~~~~~~~~~~a~~~al~~~~~-~~~~~~~~~~~~~~l~~~L~~-~-~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~L~ 346 (397)
T PRK06939 274 SNSLAPAIVAASIKVLELLEE-SDELRDRLWENARYFREGMTA-A-GFTLGPG-E---HPIIPVMLGDAKLAQEFADRLL 346 (397)
T ss_pred cCCCCHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHH-c-CCCcCCC-C---CCEEEEEECCHHHHHHHHHHHH
Confidence 223333445555566776643 356788899999999999988 4 4443322 1 2333334432 23566777765
Q ss_pred --CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHH
Q psy8850 312 --DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 312 --~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 373 (397)
||.+.++. +.. ...+.++||++++.++++++|++++++|++++++.
T Consensus 347 ~~gI~v~~~~-~~~---------------~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~~~~ 394 (397)
T PRK06939 347 EEGVYVIGFS-FPV---------------VPKGQARIRTQMSAAHTKEQLDRAIDAFEKVGKEL 394 (397)
T ss_pred HCCceEeeeC-CCC---------------CCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence 88877542 211 01123689999998889999999999999988764
No 142
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.96 E-value=1.7e-26 Score=217.26 Aligned_cols=319 Identities=18% Similarity=0.186 Sum_probs=217.5
Q ss_pred cchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHH-HhhCCc
Q psy8850 33 HIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRK-LENDGF 111 (397)
Q Consensus 33 ~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~-~~~~g~ 111 (397)
+.+++...+...++++.++++.|.+ ..++++||++|+++++.++. ++||+|+++...|+++...+.. +.+.|+
T Consensus 56 ~~y~R~~~p~~~~le~~lA~l~g~~--~av~~sSGt~Al~~al~~ll----~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi 129 (433)
T PRK08134 56 HVYSRISNPTVAVLEERVAALEGGV--GAIATASGQAALHLAIATLM----GAGSHIVASSALYGGSHNLLHYTLRRFGI 129 (433)
T ss_pred ceeecCcChHHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHHh----CCCCEEEEeCCccHHHHHHHHHHHhhCCe
Confidence 3344444567899999999999987 47889999999999998886 7899999999999988776654 344599
Q ss_pred EEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCccccccCcccccE
Q psy8850 112 RVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDL 191 (397)
Q Consensus 112 ~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~ 191 (397)
++++++.+ |+++++++++++|++|++++++||+|.+.|+++|+++||++|+++|+|++++.+.....+ .+++|+
T Consensus 130 ~v~~vd~~-----d~~~l~~~i~~~TklV~~e~~~np~g~v~Di~~I~~la~~~gi~livD~t~a~~~~~~pl-~~GaD~ 203 (433)
T PRK08134 130 ETTFVKPG-----DIDGWRAAIRPNTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDSTFTTPYLLRPF-EHGADL 203 (433)
T ss_pred EEEEECCC-----CHHHHHHhcCCCCeEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEECCCcccccCCch-hcCCCE
Confidence 99999875 799999999999999999999999999999999999999999999999999988765443 669999
Q ss_pred EEeccccccCCCC--ceEEEEec-C-------CCCccccccccCC-ccc------------------cccCCCCchhHHH
Q psy8850 192 MSFSAHKIYGPKG--IGALYIRR-N-------PRTRIEAQIHGGG-HEY------------------GLRSGTLATHQIV 242 (397)
Q Consensus 192 ~~~s~~K~~g~~g--~g~~~~~~-~-------~~~~~~~~~~~~~-~~~------------------~~~~~~~~~~~~~ 242 (397)
+++|.||++|+.| +|.+++.. . ....+.+...++. ... .......+....+
T Consensus 204 vv~S~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ls~~~A~ 283 (433)
T PRK08134 204 VYHSATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEPYAGFHGMVFAEESTVAAFLLRARREGLRDFGACLSPMNAW 283 (433)
T ss_pred EEeccccccCCCCCceEEEEEecCccccccccccccccCCcccccccchhhccchhHHHHHHHHHHHHhcCCCCCHHHHH
Confidence 9999999766655 44444431 1 1111111111110 000 0000111111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCC---------------CCCCceEEEEecCC--ChHH
Q psy8850 243 GMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMN---------------NRIPHNLNISFNFI--EGES 305 (397)
Q Consensus 243 ~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~--~~~~ 305 (397)
.+...++ .++.+.++..+++.++.+.|++ .|.+..+..|. ...++++.|.+++. ...+
T Consensus 284 l~~~gL~----tl~~R~~~~~~nA~~la~~L~~-~p~V~~V~yP~l~~~p~~~~~~~~~~~g~gg~~s~~l~~~~~~~~~ 358 (433)
T PRK08134 284 QLLQGIE----TLPLRMERHVANTRKVVAFLAS-HPAVARVAHPELESHPDHALAKRLLPRGAGSVFSFDLKGGRAAGRK 358 (433)
T ss_pred HHhcCCC----cHHHHHHHHHHHHHHHHHHHHh-CCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEEecCCHHHHHH
Confidence 1111111 3667788888889999999988 77654332211 23467888888641 1345
Q ss_pred HHHHhC--CcEecccCccCC----CCCCh----hhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHHHh
Q psy8850 306 LLMAIK--DIAVSSGSACTS----ASLEP----SYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKLRE 375 (397)
Q Consensus 306 ~~~~l~--~i~~~~g~~~~~----~~~~~----~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 375 (397)
+.+.|+ .....-|...+. ..+.+ ....+..|+.+ +.||||++. |+.|.+++.|.+++++.++
T Consensus 359 f~~~l~l~~~~~slG~~~sL~~~p~~~~h~~~~~~~~~~~Gi~~----~liRlsvGl----E~~~dli~dl~~Al~~~~~ 430 (433)
T PRK08134 359 FIESLKLFSHLANVGDARSLVIHPASTTHFRMDAAALAAAGIGE----GTIRLSIGL----EDADDLIDDLKRALKAAEK 430 (433)
T ss_pred HHHhCCcceeccccCCCCceeeCCCccCcccCCHHHHHhcCCCC----CeEEEEecc----CCHHHHHHHHHHHHHhhhh
Confidence 666665 334444443332 22111 12334566664 899999997 6778888888888876554
Q ss_pred c
Q psy8850 376 L 376 (397)
Q Consensus 376 ~ 376 (397)
.
T Consensus 431 ~ 431 (433)
T PRK08134 431 A 431 (433)
T ss_pred c
Confidence 3
No 143
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.96 E-value=4.4e-27 Score=218.08 Aligned_cols=311 Identities=14% Similarity=0.116 Sum_probs=218.0
Q ss_pred CcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHH-hhCC
Q psy8850 32 NHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKL-ENDG 110 (397)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~-~~~g 110 (397)
.+.+++...+....+++.|+++.|. +++++++|+++|+.+++.++. ++||+|+++.+.|++....+... ...|
T Consensus 44 ~~~Y~R~~npt~~~Le~~lA~leg~--e~ivvt~gg~~Ai~~~l~all----~~Gd~Il~~~~~y~~~~~~~~~~~~~~g 117 (388)
T PRK08861 44 KYDYTRSGNPNRGLLEQTLSELESG--KGAVVTNCGTSALNLWVSALL----GPDDLIVAPHDCYGGTYRLFNTRANKGD 117 (388)
T ss_pred CccccCCCCchHHHHHHHHHHHhCC--CeEEEECCHHHHHHHHHHHHc----CCCCEEEEcCCchHHHHHHHHHHHhcCC
Confidence 3445566667889999999999996 489999999999999999887 79999999999999877666443 3347
Q ss_pred cEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCccccccCccccc
Q psy8850 111 FRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVD 190 (397)
Q Consensus 111 ~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d 190 (397)
++++.++. .|++++++++++++++|++++|+||||.+.|+++|.++|+++|+++++|++|..+.....+ .+++|
T Consensus 118 i~v~~vd~-----~d~e~l~~~i~~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvDea~~~~~~~~pl-~~GaD 191 (388)
T PRK08861 118 FKVQFVDQ-----SDAAALDAALAKKPKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVDNTFLTPVLQKPL-ELGAD 191 (388)
T ss_pred eEEEEECC-----CCHHHHHHhcCcCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCccccccCCCc-ccCCC
Confidence 88888863 4899999999999999999999999999999999999999999999999999876543222 45899
Q ss_pred EEEecccc-ccCCCC--ceEEEEecC-CCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8850 191 LMSFSAHK-IYGPKG--IGALYIRRN-PRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQ 266 (397)
Q Consensus 191 ~~~~s~~K-~~g~~g--~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~ 266 (397)
++++|+|| +.|+.+ .|+++.+++ ..+++..... ......+....+.+...++ .+.-+.++..+++
T Consensus 192 ivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~~~-------~~G~~~~p~~a~l~~rgl~----Tl~lR~~~~~~~a 260 (388)
T PRK08861 192 FVIHSTTKYINGHSDVIGGVLITKTKEHAEELAWWGN-------CIGATGTPFDSYMTLRGIR----TLGARMRVHEESA 260 (388)
T ss_pred EEEeecceeccCCCcceeEEEEecHHHHHHHHHHHHh-------ccCCCCChHHHHHHHhcCC----CHHHHHHHHHHHH
Confidence 99999999 566544 477766543 2222221110 1112222222222222222 2455677888888
Q ss_pred HHHHHHHhhhcCcEEEeCCCC--------------CCCCceEEEEecCCC---hHHHHHHhC--CcEecccCccCC----
Q psy8850 267 KRLYNGLMESIEEIYINGDMN--------------NRIPHNLNISFNFIE---GESLLMAIK--DIAVSSGSACTS---- 323 (397)
Q Consensus 267 ~~l~~~l~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~---~~~~~~~l~--~i~~~~g~~~~~---- 323 (397)
..+.+.|++ .|.+..+.-|. ...++++.|.+++ + ...+.+.|+ .+...-|...+.
T Consensus 261 ~~~a~~L~~-~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~~-~~~~~~~f~~~l~l~~~~~s~G~~~sl~~~p 338 (388)
T PRK08861 261 QQILAYLQT-QSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFAG-SFEQLKVFVKALALFSLAESLGGVESLICHP 338 (388)
T ss_pred HHHHHHHHh-CCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeCC-CHHHHHHHHhcCCcceEccCCCCCcceeeCC
Confidence 888999988 77664332211 2356788888863 2 234555555 444455543332
Q ss_pred CCCChh----hHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHHHh
Q psy8850 324 ASLEPS----YVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKLRE 375 (397)
Q Consensus 324 ~~~~~~----~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 375 (397)
..+.+. ...+..|+.+ +.||+|++. |++|.+++.|+++++++.|
T Consensus 339 ~~~~h~~~~~~~~~~~gi~~----~liRlsvGl----E~~~dli~Dl~~al~~~~~ 386 (388)
T PRK08861 339 ASMTHRAMGEEALAEAGVSQ----QLLRLSVGL----EDAQDLIADLDQAFAKAAE 386 (388)
T ss_pred CcccccccCHHHHHhcCCCC----CeEEEEeCc----CCHHHHHHHHHHHHHHHHh
Confidence 222211 2233556554 899999997 6788888888888887765
No 144
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.96 E-value=6.8e-27 Score=222.15 Aligned_cols=335 Identities=17% Similarity=0.217 Sum_probs=229.1
Q ss_pred CCCCCCCHHHHHHHHHHHhhcc--CCCCCCCcchhhhHHHHHHH-HHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHh
Q psy8850 4 SATTPIDPRVVDKMIPYLRVQF--GNPASRNHIYGWTAEKAIEK-ARNEVAQLIYADPREIIWTSGATESNNLAIKGAAH 80 (397)
Q Consensus 4 ~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~ 80 (397)
++..++|+.|++++...+...+ +++.+ .+..+....+.+++ +++.+++++|++.+.|+++ |||+|+..++.++.
T Consensus 32 ~~~n~~~~~v~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~~e~~~~~~la~~~g~~~~~i~~~-sgt~al~~~l~~l~- 108 (416)
T PRK00011 32 ASENFVSPAVMEAQGSVLTNKYAEGYPGK-RYYGGCEYVDVVEQLAIDRAKELFGAEYANVQPH-SGSQANAAVYFALL- 108 (416)
T ss_pred cccCcCCHHHHHHHhchhhcccccCCCCc-cccccchHHHHHHHHHHHHHHHHhCCCceeeecC-CchHHHHHHHHHhc-
Confidence 4566789999999988765433 44444 34334444445555 6889999999987666554 56889999999886
Q ss_pred hhccCCCEEEEcCCCChhhHHHHHH--HhhCCcEEEEeccC-CCCCCCHHHHHHHhcC-CceEEEEecccCcccccccHH
Q psy8850 81 FYKKRGKHIITVQTEHKSVLDSIRK--LENDGFRVTYLKPK-NNGLITLSQLEEKICS-DTILVSVMLVNNEIGVIQPIL 156 (397)
Q Consensus 81 ~~~~~g~~vl~~~~~~~s~~~~~~~--~~~~g~~v~~v~~~-~~~~~d~~~l~~~i~~-~~~~v~~~~~~~~tG~~~~l~ 156 (397)
++||+|+++.++|+++...... ....|.+++.++.+ .++.+|++++++++++ ++++|++++. .+|...|++
T Consensus 109 ---~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~k~v~~~~~--~~~~~~~~~ 183 (416)
T PRK00011 109 ---KPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETGLIDYDEVEKLALEHKPKLIIAGAS--AYSRPIDFK 183 (416)
T ss_pred ---CCCCEEEEeccccCCccccccccccccceeeEeecCcCcccCCcCHHHHHHHHHhcCCCEEEECCC--cCCCccCHH
Confidence 7999999999999876432211 12236788888887 4578999999999975 7898888644 356778999
Q ss_pred HHHHHHHhcCcEEEEecccccCcc-----ccccCcccccEEEecccc-ccCCCCceEEEEe-cCCCCccccccccCCccc
Q psy8850 157 EIGELCRSKGVIFHCDAAQAVGKI-----DINIQNYKVDLMSFSAHK-IYGPKGIGALYIR-RNPRTRIEAQIHGGGHEY 229 (397)
Q Consensus 157 ~i~~l~~~~gi~livD~a~~~~~~-----~~~~~~~~~d~~~~s~~K-~~g~~g~g~~~~~-~~~~~~~~~~~~~~~~~~ 229 (397)
+|.++|+++|+++|+|++|+.|.. +..+. +.|++++|+|| +.|+.| |+++.+ ++..+.+......
T Consensus 184 ~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~--~~di~~~S~~K~l~g~~g-g~i~~~~~~~~~~l~~~~~~----- 255 (416)
T PRK00011 184 RFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP--HADVVTTTTHKTLRGPRG-GLILTNDEELAKKINSAVFP----- 255 (416)
T ss_pred HHHHHHHHcCCEEEEECcchhcccccCccCCCCC--CCcEEEecCCcCCCCCCc-eEEEeCCHHHHHHHHHHhCc-----
Confidence 999999999999999999976543 22333 67999999999 667765 777775 3444444332211
Q ss_pred cccCCCCchhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecC--CChHHH
Q psy8850 230 GLRSGTLATHQIVGMGEAFRL-ARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF--IEGESL 306 (397)
Q Consensus 230 ~~~~~~~~~~~~~~l~~al~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 306 (397)
...+++....++++..++.. ..++++++.+++.++++++++.|++ + ++.+... . ...+++++.+++ .+..++
T Consensus 256 -~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~-~-~~~~~~~i~~~~~~~~~~~~ 330 (416)
T PRK00011 256 -GIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAE-R-GFRVVSG-G-TDNHLVLVDLRSKGLTGKEA 330 (416)
T ss_pred -cccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh-C-CCeeeec-C-CCCeEEEEeCcccCCCHHHH
Confidence 11233444455555445443 3446788899999999999999998 4 6766531 1 224666777653 245677
Q ss_pred HHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCC----CCCHHHHHHHHHHHHHHHHH
Q psy8850 307 LMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGR----FTTEKEIDFTIKLLKMKVKK 372 (397)
Q Consensus 307 ~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~----~~~~~~i~~~~~~l~~~~~~ 372 (397)
.+.|. ||.+..+..... ...+.....+|++... .++.+|++++++.|++++..
T Consensus 331 ~~~L~~~GI~v~~~~~p~~-------------~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~~~ 389 (416)
T PRK00011 331 EAALEEANITVNKNAVPFD-------------PRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELIADVLDN 389 (416)
T ss_pred HHHHHHcCcEEccCcCCCC-------------CCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHHHHHHhc
Confidence 77775 888865431110 0011123568986422 35799999999999988664
No 145
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.96 E-value=1.9e-26 Score=218.00 Aligned_cols=322 Identities=19% Similarity=0.172 Sum_probs=221.5
Q ss_pred CCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCE
Q psy8850 9 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKH 88 (397)
Q Consensus 9 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~ 88 (397)
.+|++++++.+++..+...+.. ...-+...+...++++.+++++|.+ ..++.++|++|+..++..+... .+++.
T Consensus 60 ~~p~v~~a~~~~~~~~~~~~~~--s~~~~g~~~~~~~Le~~la~~~g~~--~~l~~~sG~~an~~ai~~l~~~--~~~~~ 133 (402)
T TIGR01821 60 QHPEVLQAMHETLDKYGAGAGG--TRNISGTNIPHVELEAELADLHGKE--SALVFTSGYVANDATLATLAKI--IPGCV 133 (402)
T ss_pred CCHHHHHHHHHHHHHcCCCCcc--hhhhhCCcHHHHHHHHHHHHHhCCC--eEEEECchHHHHHHHHHHhhCC--CCCCE
Confidence 4789999999999874322211 1111122456788999999999964 5666777899999999877621 25677
Q ss_pred EEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhc----CCceEEEEecccCcccccccHHHHHHHHHh
Q psy8850 89 IITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKIC----SDTILVSVMLVNNEIGVIQPILEIGELCRS 164 (397)
Q Consensus 89 vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~----~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~ 164 (397)
|+.....|.+....+... |.++..++.+ |+++++++++ +++++|++++++||+|.+.|+++|.++|++
T Consensus 134 v~~~~~~h~s~~~~~~~~---g~~~~~~~~~-----d~~~l~~~l~~~~~~~~~~v~~e~~~~~~G~~~~l~~i~~l~~~ 205 (402)
T TIGR01821 134 IFSDELNHASMIEGIRHS---GAEKFIFRHN-----DVAHLEKLLQSVDPNRPKIIAFESVYSMDGDIAPIEEICDLADK 205 (402)
T ss_pred EEEcchHhHHHHHHHHHc---CCeEEEECCC-----CHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccCHHHHHHHHHH
Confidence 877777888887776554 7776666543 6788888775 367899999999999999999999999999
Q ss_pred cCcEEEEecccccCcccc------ccCc--ccccEEEeccccccCCCCceEEEEecCCCCccccccccCCccccccCCCC
Q psy8850 165 KGVIFHCDAAQAVGKIDI------NIQN--YKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTL 236 (397)
Q Consensus 165 ~gi~livD~a~~~~~~~~------~~~~--~~~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (397)
||+++|+|++|+.|.... .... ..+|+++.+++|.+|..| |+++.+++..+.+.....+ ..+ .++.
T Consensus 206 ~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G-G~i~~~~~~~~~l~~~~~~----~~~-t~~~ 279 (402)
T TIGR01821 206 YGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGVVG-GYIAASRKLIDAIRSYAPG----FIF-TTSL 279 (402)
T ss_pred cCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhccCC-ceeecCHHHHHHHHHhCcC----cee-cCcC
Confidence 999999999998554211 0001 146899899999777665 8888776654444322111 111 2234
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecC-CChHHHHHHh--C-C
Q psy8850 237 ATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF-IEGESLLMAI--K-D 312 (397)
Q Consensus 237 ~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l--~-~ 312 (397)
+...+++..++++.+.+. ..+.++..++++++.+.|++ + ++.+..+. ..++.+.++. ....++.+.| + |
T Consensus 280 ~~~~~aaa~aaL~~~~~~-~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~----~~i~~i~~~~~~~a~~~~~~L~~~~G 352 (402)
T TIGR01821 280 PPAIAAGATASIRHLKES-QDLRRAHQENVKRLKNLLEA-L-GIPVIPNP----SHIVPVIIGDAALCKKVSDLLLNKHG 352 (402)
T ss_pred CHHHHHHHHHHHHHhhcC-HHHHHHHHHHHHHHHHHHHH-c-CCCcCCCC----CCEEEEEeCCHHHHHHHHHHHHhcCC
Confidence 445566666888877654 55666777889999999988 4 55544332 3344554432 1245676665 2 7
Q ss_pred cEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHH
Q psy8850 313 IAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 313 i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 373 (397)
|.+.+...... +.+...|||+++..++++||++++++|+++++++
T Consensus 353 i~v~~~~~p~~----------------~~g~~~lRis~~~~~t~edi~~~~~~l~~~~~~~ 397 (402)
T TIGR01821 353 IYVQPINYPTV----------------PRGTERLRITPTPAHTDKMIDDLVEALLLVWDRL 397 (402)
T ss_pred EEEEeECCCCC----------------CCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence 88876432111 1123689999999999999999999999988654
No 146
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=2.2e-27 Score=220.50 Aligned_cols=280 Identities=17% Similarity=0.134 Sum_probs=202.6
Q ss_pred HHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCC-CEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCC
Q psy8850 43 IEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRG-KHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNN 121 (397)
Q Consensus 43 ~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g-~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~ 121 (397)
..++++++++++|+++++|++|+|+++++.+++.++. ++| |+|++..|.|+.+...++.. |.+++.+|.+++
T Consensus 62 ~~~Lr~aia~~~~~~~~~I~it~Gs~~~i~~~~~~~~----~~g~d~vlv~~P~y~~y~~~~~~~---g~~v~~v~~~~~ 134 (354)
T PRK04635 62 PPELINAYSAYAGVAPEQILTSRGADEAIELLIRAFC----EPGQDSIACFGPTYGMYAISAETF---NVGVKALPLTAD 134 (354)
T ss_pred HHHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHHhc----CCCCCeEEEcCCChHHHHHHHHHc---CCEEEEEecCCC
Confidence 5778999999999999999999999999999999887 677 89999999999887666655 999999999877
Q ss_pred CCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhc-CcEEEEecccccCccc---ccc-CcccccEEEecc
Q psy8850 122 GLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSK-GVIFHCDAAQAVGKID---INI-QNYKVDLMSFSA 196 (397)
Q Consensus 122 ~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~-gi~livD~a~~~~~~~---~~~-~~~~~d~~~~s~ 196 (397)
+.+|++.+++ + +++++|++++|+||||.++|.+++.++++.. +++||+|++|.-.... .++ ...+.-+++.|+
T Consensus 135 ~~~~~~~l~~-~-~~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~~~~~~~s~~~~~~~~~~~iv~~S~ 212 (354)
T PRK04635 135 YQLPLDYIEQ-L-DGAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYIEFCPEYSVADLLASYPNLVVLRTL 212 (354)
T ss_pred CCCCHHHHHh-c-cCCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchHhhccCcchHHHHhhCCCEEEEech
Confidence 7889998874 4 6899999999999999999999998888763 7999999998632211 111 111344778999
Q ss_pred ccccCCCC--ceEEEEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
Q psy8850 197 HKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLA-RIEMKEELKRILFLQKRLYNGL 273 (397)
Q Consensus 197 ~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~-~~~~~~~~~~~~~~~~~l~~~l 273 (397)
||.+|.+| +|+++++++....+...... ...+.....+..++++.. .+.+.+..+++.++++++.+.|
T Consensus 213 SK~~~l~GlRlG~~i~~~~~~~~l~~~~~~---------~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L 283 (354)
T PRK04635 213 SKAFALAGARCGFTLANEELIEILMRVIAP---------YPVPLPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAAL 283 (354)
T ss_pred HHHhhhhHHHHhhhhCCHHHHHHHHhhcCC---------CCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 99777555 79999887665555433211 112222222222334321 1235566777888889999999
Q ss_pred hhhcCcEEEeCCCCCCCCceEEEEecCCChHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeC
Q psy8850 274 MESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIG 351 (397)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~ 351 (397)
++ ++++.+..+ . +.++++.++ +..++.+.+. ||.+..... . ...+++||+++
T Consensus 284 ~~-~~~~~~~~~-~---g~f~~~~~~--~~~~~~~~l~~~gv~v~~~~~--~-----------------~~~~~lRis~~ 337 (354)
T PRK04635 284 SM-YGGAKVLEG-N---GNYVLAKFD--DVDAVFKALWDAGIVARAYKD--P-----------------RLANCIRFSFS 337 (354)
T ss_pred Hh-CCCceECCC-C---CcEEEEECC--CHHHHHHHHHHCCEEEEECCC--C-----------------CCCCeEEEEeC
Confidence 98 666665543 2 345566665 3556666555 787764311 0 11378999986
Q ss_pred CCCCHHHHHHHHHHHHHH
Q psy8850 352 RFTTEKEIDFTIKLLKMK 369 (397)
Q Consensus 352 ~~~~~~~i~~~~~~l~~~ 369 (397)
+.+++++++++|++.
T Consensus 338 ---~~e~~~~l~~al~~~ 352 (354)
T PRK04635 338 ---NRAETDKLIGLIRNQ 352 (354)
T ss_pred ---CHHHHHHHHHHHHHh
Confidence 689999999999764
No 147
>PLN02452 phosphoserine transaminase
Probab=99.96 E-value=1.1e-26 Score=213.09 Aligned_cols=333 Identities=17% Similarity=0.127 Sum_probs=240.9
Q ss_pred CCCCCCCCHHHHHHHHHHHhhccCCC--CCCCcchhhhHHHHHHHHHHHHHHHhCCCCCc--EEEeCChhHHHHHHHHHh
Q psy8850 3 YSATTPIDPRVVDKMIPYLRVQFGNP--ASRNHIYGWTAEKAIEKARNEVAQLIYADPRE--IIWTSGATESNNLAIKGA 78 (397)
Q Consensus 3 ~~~~~~~~~~v~~a~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~--i~~~~g~t~a~~~~l~~l 78 (397)
.++++..|++|++++++.+.++.+.. .......+..+.+.+.++++.|+++++.+.+. +++..|||.++++++..+
T Consensus 12 ~pGP~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~~~ea~~~nl 91 (365)
T PLN02452 12 SAGPATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDNYEVLFLQGGASTQFAAIPLNL 91 (365)
T ss_pred eCCCCCCCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEeCccHHHHHHHHHhc
Confidence 46777889999999998875432111 11122335677899999999999999986442 666789999999999999
Q ss_pred HhhhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCC---CCCHHHHHHHhcCCceEEEEecccCccccc-cc
Q psy8850 79 AHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNG---LITLSQLEEKICSDTILVSVMLVNNEIGVI-QP 154 (397)
Q Consensus 79 ~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~---~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~-~~ 154 (397)
+ .+|+++++......+-.. .+.+.+.|...+........ .+++++++ ..++.++|.+++..+.||+. .|
T Consensus 92 ~----~~~~~~l~~~~G~fg~r~-~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~hnETstGv~~~~ 164 (365)
T PLN02452 92 C----KPGDKADFVVTGSWSKKA-AKEAKKYCKTNVIASGKDEKYTKIPSVSEWE--LTPDAKFVHICANETIHGVEFKD 164 (365)
T ss_pred C----CCCCeEEEEECCHHHHHH-HHHHHHhCCCcEEEecCCCCCCCCCChHHcC--CCCCCcEEEECCCCCCCcEecCc
Confidence 8 677888777666655543 34444556544433222222 45666542 23568999999999999995 77
Q ss_pred HHHHHHHHHhcCcEEEEecccccCccccccCcccccEEEeccccccCCCCceEEEEecCCCCcccccccc---CC--ccc
Q psy8850 155 ILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHG---GG--HEY 229 (397)
Q Consensus 155 l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~~~~~~~---~~--~~~ 229 (397)
++++. ++++++|++++++..++|+..+++|+ +|.||++||+|+|+++++++++++..+.... +. ...
T Consensus 165 ~~~i~------~~~lvVDa~Ss~g~~pidv~~~~v~~--~saqK~lGP~Gl~~v~vr~~~l~~~~~~~~~~~~~~~~~~~ 236 (365)
T PLN02452 165 YPDVG------NVPLVADMSSNFLSKPVDVSKYGVIY--AGAQKNVGPSGVTIVIIRKDLIGNARPITPGMLDYKIHAEN 236 (365)
T ss_pred ccccC------CCeEEEECCccccCcccCHHHcCEEE--EecccccCCCCeEEEEEcHHHHhhcccCCCchhhHHHHHhc
Confidence 77764 38999999999999999999777655 6999977999999999999877665432221 11 011
Q ss_pred cccCCCCchhHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhhhcCcEEEe-CCCCCCCCceEEEEecCC-ChHH
Q psy8850 230 GLRSGTLATHQIVGMGEAFRLARI--EMKEELKRILFLQKRLYNGLMESIEEIYIN-GDMNNRIPHNLNISFNFI-EGES 305 (397)
Q Consensus 230 ~~~~~~~~~~~~~~l~~al~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~ 305 (397)
....+||++..++++.++++++.+ +++.+.++.+++++++++.|++ .+++... .++..+....+.|.+++. ...+
T Consensus 237 ~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~-~~G~y~~~~~~~~rs~~~vsF~~~~~~~~~~ 315 (365)
T PLN02452 237 DSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDE-SNGFYVCPVEKSVRSLMNVPFTLGGSELEAE 315 (365)
T ss_pred CCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHh-CCCcccCCCChHHhCCeEEEEEcCCchhHHH
Confidence 233479999999999999999976 6999999999999999999998 7776222 111223344556666553 3456
Q ss_pred HHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHH
Q psy8850 306 LLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKK 372 (397)
Q Consensus 306 ~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 372 (397)
|.+.++ |+..-+|.... +.+|+|+...++.++|+.+++.|+++.++
T Consensus 316 f~~~~~~~g~~~~~G~r~~---------------------gg~R~s~yna~~~~~v~~L~~~m~~f~~~ 363 (365)
T PLN02452 316 FVKEAAKAGMVQLKGHRSV---------------------GGMRASIYNAMPLAGVEKLVAFMKDFQAK 363 (365)
T ss_pred HHHHHHHCCCcccCCcccc---------------------CceEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence 666665 77777664221 33999999999999999999999998765
No 148
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.96 E-value=4.2e-27 Score=219.99 Aligned_cols=307 Identities=16% Similarity=0.150 Sum_probs=215.4
Q ss_pred hhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHHhh-CCcEE
Q psy8850 35 YGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLEN-DGFRV 113 (397)
Q Consensus 35 ~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~-~g~~v 113 (397)
+++...+...++++.+++++|.+ ..++++||+.|+..++.++. ++||+|+++.+.|+++...+..... .|+++
T Consensus 55 y~r~~~pt~~~Le~~lA~l~G~~--~al~~~sG~~Ai~~~l~al~----~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~ 128 (386)
T PRK06767 55 YSRLGNPTVKLFEERMAVLEGGE--EALAFGSGMAAISATLIGFL----KAGDHIICSNGLYGCTYGFLEVLEEKFMITH 128 (386)
T ss_pred ccCCCCcchHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHHh----CCCCEEEEcCCcHHHHHHHHHHHHhhcCeEE
Confidence 34344456789999999999975 45666777889999988887 7999999999999988877766543 37777
Q ss_pred EEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCccccccCcccccEEE
Q psy8850 114 TYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMS 193 (397)
Q Consensus 114 ~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~ 193 (397)
..++.. |++++++++++++++|++++++||+|.+.|+++|.++|+++|+++|+|++++.+.....+ ..++|+++
T Consensus 129 ~~~~~~-----d~~~l~~~i~~~tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD~a~a~~~~~~pl-~~g~Div~ 202 (386)
T PRK06767 129 SFCDME-----TEADIENKIRPNTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTFCSPYLQRPL-ELGCDAVV 202 (386)
T ss_pred EEeCCC-----CHHHHHHhhCcCceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEECCCcccccCCch-hcCCcEEE
Confidence 766543 789999999999999999999999999999999999999999999999999855443332 34789999
Q ss_pred eccccccCCCC---ceEEEEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8850 194 FSAHKIYGPKG---IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLY 270 (397)
Q Consensus 194 ~s~~K~~g~~g---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~ 270 (397)
+|++|++++.| .|+++++++.+..+...... ...+..+....+.....++ .+..+.++..+++.++.
T Consensus 203 ~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~~~~------~~g~~~~~~~a~l~~~~L~----tl~~r~~~~~~~a~~la 272 (386)
T PRK06767 203 HSATKYIGGHGDVVAGVTICKTRALAEKIRPMRK------DIGGIMAPFDAWLLLRGLK----TLAVRMDRHCDNAEKIV 272 (386)
T ss_pred ecCcceecCCCCceeEEEEeChHHHHHHHHHHHH------HhCCCCCHHHHHHHHcCCC----cHHHHHHHHHHHHHHHH
Confidence 99999554434 58888887655443211110 0011222222222222222 34556788899999999
Q ss_pred HHHhhhcCcEEEeCCC--------CCCCCceEEEEecCC--ChHHHHHHhC--CcEecccCccCCC----CCCh----hh
Q psy8850 271 NGLMESIEEIYINGDM--------NNRIPHNLNISFNFI--EGESLLMAIK--DIAVSSGSACTSA----SLEP----SY 330 (397)
Q Consensus 271 ~~l~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~--~~~~~~~~l~--~i~~~~g~~~~~~----~~~~----~~ 330 (397)
+.|++ .|++..+..| ....++++.|.+++. +..++.+.|+ ++.++-|...+.. .+.+ ..
T Consensus 273 ~~L~~-~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~ 351 (386)
T PRK06767 273 SFLKN-HDAVEGVWYPEGELASRQMKRGGGVISFSIKGGKEETQAFINDLHFITIAVSLGDTETLIQHPATMTHAAIPAE 351 (386)
T ss_pred HHHHc-CCCccEEECCCcHHHHHhCCCCCceEEEEEcCCHHHHHHHHHhCCccEEecCCCCcCccccCCCccccccCCHH
Confidence 99999 8887744321 112367888888642 3567888887 6677777655432 1111 11
Q ss_pred HHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHH
Q psy8850 331 VLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKK 372 (397)
Q Consensus 331 ~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 372 (397)
..+..|+.+ +.||||++. |+.|.+++.|.+++..
T Consensus 352 ~~~~~gi~~----~l~R~svGl----E~~~dl~~dl~~al~~ 385 (386)
T PRK06767 352 LRQEMGIYD----NLIRLSVGL----ESWEDIVSDLEQALKK 385 (386)
T ss_pred HHHhcCCCC----CeEEEEecc----CCHHHHHHHHHHHHhh
Confidence 223455543 899999997 6677788888777653
No 149
>PLN02263 serine decarboxylase
Probab=99.96 E-value=9.3e-26 Score=209.61 Aligned_cols=293 Identities=15% Similarity=0.125 Sum_probs=220.6
Q ss_pred hHHHHHHHHHHHHHHHhCCCCC--cEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEE
Q psy8850 38 TAEKAIEKARNEVAQLIYADPR--EIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTY 115 (397)
Q Consensus 38 ~~~~~~~~~~~~la~~~~~~~~--~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~ 115 (397)
...+...++-+++++++|.+++ ..++|+|||+|+..++.+.+..+ +...+++++..|.|+.+++..+ |++++.
T Consensus 130 ~s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~--~~~vvy~S~~aH~Sv~KAa~ll---gi~~~~ 204 (470)
T PLN02263 130 HSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVF--PDGILYASRESHYSVFKAARMY---RMECVK 204 (470)
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhc--CCcEEEEcCCccHHHHHHHHhc---CCcceE
Confidence 5667888899999999999764 48999999999999998776432 3458999999999999999998 999999
Q ss_pred eccCCCCCCCHHHHHHHhcCC---ceEEEEecccCcccccccHHHHHHHHHhcCc-----EEEEecccccCccc------
Q psy8850 116 LKPKNNGLITLSQLEEKICSD---TILVSVMLVNNEIGVIQPILEIGELCRSKGV-----IFHCDAAQAVGKID------ 181 (397)
Q Consensus 116 v~~~~~~~~d~~~l~~~i~~~---~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi-----~livD~a~~~~~~~------ 181 (397)
||.++++.+|+++|+++|.++ +.+|+.+.+++++|.+.|+++|.++|+++|+ |+|||+|++....+
T Consensus 205 Vp~d~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~ 284 (470)
T PLN02263 205 VDTLVSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRAP 284 (470)
T ss_pred eccCCCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhccccc
Confidence 999999999999999999754 5678889999999999999999999999997 99999999865443
Q ss_pred -cccCcccccEEEecccc-ccCCCCceEEEEecCCCCccc---cccccCCccccccCCCCchhHHHHHHHHHHHH-HHHH
Q psy8850 182 -INIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIE---AQIHGGGHEYGLRSGTLATHQIVGMGEAFRLA-RIEM 255 (397)
Q Consensus 182 -~~~~~~~~d~~~~s~~K-~~g~~g~g~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~-~~~~ 255 (397)
+++.. ++|+++.++|| ++.|.++|++++++.....+. +++... ..-..++.+....+.++.+++.+ .+++
T Consensus 285 ~~df~~-~vDSIsvD~HK~l~~P~~cgvll~R~~~~~~~~~~~~Yl~~~---d~ti~gSR~g~~al~lW~~L~~~G~~G~ 360 (470)
T PLN02263 285 KVTFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASR---DATIMGSRNGHAPIFLWYTLNRKGYRGF 360 (470)
T ss_pred ccCCCc-CccEEEECCccccCCCcCEEEEEEehhhHhhhccChHhhCCC---CCCcCCCCCcHHHHHHHHHHHHhCHHHH
Confidence 33333 49999999999 566889999999975432221 111111 11123444544566677777765 5689
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCChHHHHHHhCCcEecccCccCCCCCChhhHHHhh
Q psy8850 256 KEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAIKDIAVSSGSACTSASLEPSYVLRAL 335 (397)
Q Consensus 256 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~ 335 (397)
.++.++..++++++.+.|++ . ++..+..+. ...+.|.......+ .++-.+..
T Consensus 361 ~~~i~~~~~~A~~l~~~l~~-~-g~~~~~~p~-----s~~V~f~~p~~~~~---~~gW~L~~------------------ 412 (470)
T PLN02263 361 QKEVQKCLRNAHYLKDRLRE-A-GISAMLNEL-----SSTVVFERPKDEEF---VRRWQLAC------------------ 412 (470)
T ss_pred HHHHHHHHHHHHHHHHHHHh-C-CCeEEeCCC-----ceEEEEecCchHHh---hcceEEcc------------------
Confidence 99999999999999999999 5 565554432 23344442222111 12322221
Q ss_pred CCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHH
Q psy8850 336 GCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 336 g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 373 (397)
.++.+|+++....+.+.+|++++.|++..+..
T Consensus 413 ------~~~~~Hivvmphv~~~~id~fi~DL~~~~~~~ 444 (470)
T PLN02263 413 ------QGNIAHVVVMPSVTIEKLDYFLKELVEKRSTW 444 (470)
T ss_pred ------CCCcEEEEEcCCCCHHHHHHHHHHHHHHHhhh
Confidence 12568999998778999999999998887643
No 150
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.96 E-value=5.1e-27 Score=222.17 Aligned_cols=319 Identities=13% Similarity=0.122 Sum_probs=212.2
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHh------CCCCCcEEEeCChhHHHHHHHHHhHhh
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLI------YADPREIIWTSGATESNNLAIKGAAHF 81 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~------~~~~~~i~~~~g~t~a~~~~l~~l~~~ 81 (397)
++++.+.+++.+.+.....+.. ..+|.......++|+++++++ ++++++|++|+|+++|+.+++. +.
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~----~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~l~~-~~-- 119 (409)
T PRK07590 47 PLPPAVIEAMHKAVDEMGTAET----FRGYGPEQGYDFLREKIAENDYQARGCDISADEIFISDGAKCDTGNILD-IF-- 119 (409)
T ss_pred CCCHHHHHHHHHHHhcccccCC----ccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCCHHHHHHHHHH-hc--
Confidence 4578889999888765221111 111222335567788887775 5788899999999999988643 44
Q ss_pred hccCCCEEEEcCCCChhhHHHHHHHhhCCcE-----------EEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCccc
Q psy8850 82 YKKRGKHIITVQTEHKSVLDSIRKLENDGFR-----------VTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIG 150 (397)
Q Consensus 82 ~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~-----------v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG 150 (397)
.+||+|++.+|+|+.+...+... |.+ ++.+|.++++.+.++ +. .+++++|++++|+||||
T Consensus 120 --~~gd~V~v~~P~Y~~~~~~~~~~---g~~~~~~~~~~~~~~~~v~~~~~~~~~~d-~~---~~~~k~i~l~nP~NPTG 190 (409)
T PRK07590 120 --GPDNTIAVTDPVYPVYVDTNVMA---GRTGEANEDGRYSGIVYLPCTAENNFVPE-LP---EEKVDIIYLCFPNNPTG 190 (409)
T ss_pred --CCCCEEEEeCCCCcchHHHHHHc---CCcccccccccccceeEeecccccCCccc-Cc---ccCceEEEEeCCCCCcC
Confidence 68999999999999999888887 665 888888744323222 11 25789999999999999
Q ss_pred ccccH---HHHHHHHHhcCcEEEEecccccCc----cccccCcc----cccEEEeccccccCCCC--ceEEEEecCCCCc
Q psy8850 151 VIQPI---LEIGELCRSKGVIFHCDAAQAVGK----IDINIQNY----KVDLMSFSAHKIYGPKG--IGALYIRRNPRTR 217 (397)
Q Consensus 151 ~~~~l---~~i~~l~~~~gi~livD~a~~~~~----~~~~~~~~----~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~ 217 (397)
.+++. ++|+++|++||++||+|++|+... .+..+..+ +..+++.|++|.+|.+| +|+++++++....
T Consensus 191 ~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~pGlRiG~~i~~~~li~~ 270 (409)
T PRK07590 191 TVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSFSKTAGFTGTRCAYTVVPKELKGK 270 (409)
T ss_pred CcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecCccccCCcCceeEEEEcCHHHhhh
Confidence 99994 568888999999999999987221 11112111 23577899999666445 7999988766542
Q ss_pred cc--------cccccCCccccccCCCCchhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCC
Q psy8850 218 IE--------AQIHGGGHEYGLRSGTLATHQIVGMGEAFRL-ARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNN 288 (397)
Q Consensus 218 ~~--------~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 288 (397)
+. ...... ........+.....++.++++. ...++++..+.++++++++.+.|++ . ++.+..+.+
T Consensus 271 ~~~~~~~~~~~~~~~~---~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~-~-~~~~~~~~g- 344 (409)
T PRK07590 271 TSDGEGVSLNSLWNRR---QSTKFNGVSYIVQRAAEAVYSPEGKAQIKELIDYYMENAKIIREGLES-A-GFEVYGGVN- 344 (409)
T ss_pred ccccchhhhHHHHHHH---HhhcccCcCHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHh-c-CCceecCCc-
Confidence 20 000000 0000112333334444344532 2345677888999999999999998 4 555544322
Q ss_pred CCCceEEEEecC-CChHHHHHHhC---CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHH
Q psy8850 289 RIPHNLNISFNF-IEGESLLMAIK---DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIK 364 (397)
Q Consensus 289 ~~~~~~~~~~~~-~~~~~~~~~l~---~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~ 364 (397)
+..+++.++. .+..++...+. +|.+.+|..|.. .+.+++||++. .+++++++.++
T Consensus 345 --~~f~wi~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~-----------------~~~~~iRi~~~--~~~~~l~~~l~ 403 (409)
T PRK07590 345 --APYIWVKTPDGMSSWDFFDKLLQEANVVGTPGSGFGP-----------------SGEGYFRLSAF--GSRENVLEAME 403 (409)
T ss_pred --ceEEEEECCCCCCHHHHHHHHHHHCCEEEeChhHhCC-----------------CCCCEEEEEcc--CCHHHHHHHHH
Confidence 4567788764 35566666552 899999865532 11378999964 47899999999
Q ss_pred HHHHH
Q psy8850 365 LLKMK 369 (397)
Q Consensus 365 ~l~~~ 369 (397)
+|.++
T Consensus 404 rl~~~ 408 (409)
T PRK07590 404 RIKKA 408 (409)
T ss_pred HHHhh
Confidence 98765
No 151
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=1.8e-26 Score=214.79 Aligned_cols=286 Identities=14% Similarity=0.115 Sum_probs=204.4
Q ss_pred HHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCC-CEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCC-
Q psy8850 43 IEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRG-KHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN- 120 (397)
Q Consensus 43 ~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g-~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~- 120 (397)
..++++.+++++++++++|++++|+++++.+++.++. .+| ++|++++|.|..+....+.. |.+++.+|.++
T Consensus 61 ~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~~----~~g~~~vlv~~p~y~~~~~~~~~~---g~~~~~v~~~~~ 133 (364)
T PRK04781 61 PPGLRSALAALYGCAPEQLLIGRGSDEAIDLLVRALC----VPGRDAVLVTPPVFGMYAVCARLQ---NAPLVEVPLVDG 133 (364)
T ss_pred HHHHHHHHHHHhCcChHHEEEeCCHHHHHHHHHHHhc----CCCCCeEEEcCCChHHHHHHHHHc---CCEEEEEecCCC
Confidence 5789999999999999999999999999999999887 677 79999999888776655555 99999999742
Q ss_pred -C-CCCCHHHHHHH-hcCCceEEEEecccCcccccccHHHHHHHHHh--cCcEEEEecccccCccc---cc-cCcccccE
Q psy8850 121 -N-GLITLSQLEEK-ICSDTILVSVMLVNNEIGVIQPILEIGELCRS--KGVIFHCDAAQAVGKID---IN-IQNYKVDL 191 (397)
Q Consensus 121 -~-~~~d~~~l~~~-i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~--~gi~livD~a~~~~~~~---~~-~~~~~~d~ 191 (397)
+ ..+|++++++. ..++++++++++|+||||.++|.+++.++++. ++++||+|++|.-.... .. ....+..+
T Consensus 134 ~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~~f~~~~~~~~~~~~~~~vi 213 (364)
T PRK04781 134 ADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGEFSDVPSAVGLLARYDNLA 213 (364)
T ss_pred ccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcchhhcCCcchHHHHhhCCCEE
Confidence 2 35788887654 46789999999999999999998887777764 48999999998722211 11 12224568
Q ss_pred EEeccccccCCCC--ceEEEEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Q psy8850 192 MSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLA-RIEMKEELKRILFLQKR 268 (397)
Q Consensus 192 ~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~-~~~~~~~~~~~~~~~~~ 268 (397)
++.|++|.+|.+| +|+++++++..+.+...... ...+.....+...+++.. .+...+..++++++++.
T Consensus 214 ~~~SfSK~~gl~GlRvGy~v~~~~l~~~l~~~~~~---------~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~ 284 (364)
T PRK04781 214 VLRTLSKAHALAAARIGSLIANAELIAVLRRCQAP---------YPVPTPCAALAEQALSAPALAVTARRVAEVRAERER 284 (364)
T ss_pred EEecChhhcccccceeeeeeCCHHHHHHHHhccCC---------CCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 8999999766445 79999887766555443211 112222222222444422 12345556678888999
Q ss_pred HHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCChHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceE
Q psy8850 269 LYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSI 346 (397)
Q Consensus 269 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~i 346 (397)
+.+.|++ ++++....+.. +.++++.++ +..++.+.+. ||.+.++..+.. ..+++
T Consensus 285 l~~~L~~-~~~~~~~~p~~---g~f~~~~~~--~~~~~~~~l~~~gI~v~~~~~~~~------------------~~~~~ 340 (364)
T PRK04781 285 LHAALAQ-LPGVRRVYPSQ---GNFLLVRFD--DAEAAFQALLAAGVVVRDQRAAPR------------------LSDAL 340 (364)
T ss_pred HHHHHHh-CCCCCeECCCC---CcEEEEEcC--CHHHHHHHHHHCCeEEeeCCCCCC------------------CCCeE
Confidence 9999988 77754333323 456667765 3556666665 999998753311 13789
Q ss_pred EEeeCCCCCHHHHHHHHHHHHHHHH
Q psy8850 347 RFTIGRFTTEKEIDFTIKLLKMKVK 371 (397)
Q Consensus 347 Ri~~~~~~~~~~i~~~~~~l~~~~~ 371 (397)
||+++ +.+++++++++|+++..
T Consensus 341 Ris~~---~~~~~~~l~~al~~~~~ 362 (364)
T PRK04781 341 RITLG---TPEQNDRVLAALQRTQA 362 (364)
T ss_pred EEeCC---CHHHHHHHHHHHHHHHh
Confidence 99998 58999999999987643
No 152
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.96 E-value=2.6e-26 Score=217.50 Aligned_cols=322 Identities=18% Similarity=0.173 Sum_probs=216.9
Q ss_pred CCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCE
Q psy8850 9 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKH 88 (397)
Q Consensus 9 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~ 88 (397)
++|.+++++.+.+..+..+... . ..-+...+...++++.+++++|.+ +.++++ +|++|+..++..+... .+|+.
T Consensus 61 ~~p~v~~a~~~~~~~~~~~~~~-s-~~~~~~~~~~~~Le~~la~~~g~~-~~i~~~-sG~~a~~~~i~~l~~~--~~g~~ 134 (410)
T PRK13392 61 QHPDVIGAMVDALDRYGAGAGG-T-RNISGTSHPHVLLERELADLHGKE-SALLFT-SGYVSNDAALSTLGKL--LPGCV 134 (410)
T ss_pred CCHHHHHHHHHHHHHcCCCCch-h-hhcccChHHHHHHHHHHHHHhCCC-CEEEEC-cHHHHHHHHHHHHhcC--CCCCE
Confidence 5889999999988764322211 1 111122335679999999999964 445554 5578888888866521 36788
Q ss_pred EEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhc----CCceEEEEecccCcccccccHHHHHHHHHh
Q psy8850 89 IITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKIC----SDTILVSVMLVNNEIGVIQPILEIGELCRS 164 (397)
Q Consensus 89 vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~----~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~ 164 (397)
|+++...|.++...+... |.++..++.+ |.+++++.+. +++++|++++++||+|.+.|+++|.++|++
T Consensus 135 vi~~~~~h~s~~~~~~~~---g~~~~~~~~~-----d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~~~~l~~i~~l~~~ 206 (410)
T PRK13392 135 ILSDALNHASMIEGIRRS---GAEKQVFRHN-----DLADLEEQLASVDPDRPKLIAFESVYSMDGDIAPIEAICDLADR 206 (410)
T ss_pred EEEehhhhHHHHHHHHHc---CCeEEEEeCC-----CHHHHHHHHHhccCCCCEEEEEeCCCCCCcccccHHHHHHHHHH
Confidence 998888898887765544 8887776543 4555655553 578999999999999999999999999999
Q ss_pred cCcEEEEecccccCccccc------cCc--ccccEEEeccccccCCCCceEEEEecCCCCccccccccCCccccccCCCC
Q psy8850 165 KGVIFHCDAAQAVGKIDIN------IQN--YKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTL 236 (397)
Q Consensus 165 ~gi~livD~a~~~~~~~~~------~~~--~~~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (397)
||+++|+|++|+.|..... ... -.+|+++.|++|.+|..| |+++.+++..+.+.....+ ..+ ....
T Consensus 207 ~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~G-G~~~~~~~~~~~l~~~~~~----~~~-s~~~ 280 (410)
T PRK13392 207 YNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGCLG-GYIAASADLIDFVRSFAPG----FIF-TTAL 280 (410)
T ss_pred cCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhccc-chhhcCHHHHHHHHHhCcc----hhc-cCcC
Confidence 9999999999985543111 001 146889999999666666 8887776655543332211 111 1223
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCC-ChHHHHHHhC---C
Q psy8850 237 ATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFI-EGESLLMAIK---D 312 (397)
Q Consensus 237 ~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~---~ 312 (397)
+....++..++++.... .....+++.++++++.+.|++ + ++.+..+. .+++.+.++.. ...++.+.|. |
T Consensus 281 ~~~~~~a~~aaL~~~~~-~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~----~~~~~i~~~~~~~~~~~~~~L~~~~G 353 (410)
T PRK13392 281 PPAVAAGATAAIRHLKT-SQTERDAHQDRVAALKAKLNA-N-GIPVMPSP----SHIVPVMVGDPTLCKAISDRLMSEHG 353 (410)
T ss_pred CHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHH-c-CCCCCCCC----CCEEEEEeCCHHHHHHHHHHHHHhCC
Confidence 44556666678876543 344567788889999999988 4 65544322 33444444321 2456777662 8
Q ss_pred cEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHH
Q psy8850 313 IAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 313 i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 373 (397)
|.+.+...... +.+..+|||+++..++++|+|+++++|.++.+++
T Consensus 354 I~v~~~~~p~~----------------~~~~~~lRis~~~~~t~edid~l~~aL~~~~~~~ 398 (410)
T PRK13392 354 IYIQPINYPTV----------------PRGTERLRITPTPLHDDEDIDALVAALVAIWDRL 398 (410)
T ss_pred EEEeeeCCCCC----------------CCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHc
Confidence 88876532110 1123689999999999999999999999886543
No 153
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.96 E-value=2.4e-27 Score=220.58 Aligned_cols=307 Identities=15% Similarity=0.135 Sum_probs=214.5
Q ss_pred cchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHH-hhCCc
Q psy8850 33 HIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKL-ENDGF 111 (397)
Q Consensus 33 ~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~-~~~g~ 111 (397)
+.+++...+...++++.+++++|.+ ++++++||+.|+.+++. +. ++||+|+++++.|+++...+..+ ...|.
T Consensus 39 ~~Y~r~~~p~~~~le~~la~l~g~~--~~l~~~sG~~al~~~l~-ll----~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~ 111 (378)
T TIGR01329 39 YDYTRSGNPTRTALESLLAKLDKAD--RAFAFSSGMAALDVITR-LL----NNGDEIIAGDDLYGGTDRLLTQVVPRSGV 111 (378)
T ss_pred CccCCCCChHHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHH-Hh----CCCCEEEEcCCCchHHHHHHHHHHHHcCc
Confidence 3344344456889999999999984 67777888889887765 55 79999999999999887766543 34599
Q ss_pred EEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCccccccCcccccE
Q psy8850 112 RVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDL 191 (397)
Q Consensus 112 ~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~ 191 (397)
+++.++.+ |++++++++++++++|++++++||+|.+.|+++|+++||++|+++|+|++++.+.....+ .+++|+
T Consensus 112 ~v~~vd~~-----d~~~le~~i~~~tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~~~~~~~~l-~~g~Di 185 (378)
T TIGR01329 112 VVVHVDTT-----DLDKVKAALGPKTKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMMSPLLCNPL-ELGADI 185 (378)
T ss_pred EEEEeCCC-----CHHHHHHhcCcCceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccCChh-hcCCcE
Confidence 99999874 899999999999999999999999999999999999999999999999999766543333 458999
Q ss_pred EEecccc-ccCCCC--ceEEEEecCCC-CccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8850 192 MSFSAHK-IYGPKG--IGALYIRRNPR-TRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQK 267 (397)
Q Consensus 192 ~~~s~~K-~~g~~g--~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~ 267 (397)
+++|++| +.|+.+ .|+++++++.. +++....... ....+....+-+...+ +.++.+.++..+++.
T Consensus 186 ~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~~~~~~-------G~~~~~~~a~l~~~~l----~tl~~R~e~~~~na~ 254 (378)
T TIGR01329 186 VYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYFLQNST-------GSGLAPFDCWLLLRGI----KTLAIRIEKQQENAR 254 (378)
T ss_pred EEEecceeccCCccceeEEEEeCcHHHHHHHHHHHHhc-------CCcCCHHHHHHHHccC----CCHHHHHHHHHHHHH
Confidence 9999999 667655 78888865432 3333322110 0111111111111111 235667777788888
Q ss_pred HHHHHHhhhcCcEEEe-CC-------------CCCCCCceEEEEecCCC-hHHHHHHhC--CcEecccCccCC----CCC
Q psy8850 268 RLYNGLMESIEEIYIN-GD-------------MNNRIPHNLNISFNFIE-GESLLMAIK--DIAVSSGSACTS----ASL 326 (397)
Q Consensus 268 ~l~~~l~~~~~~~~~~-~~-------------~~~~~~~~~~~~~~~~~-~~~~~~~l~--~i~~~~g~~~~~----~~~ 326 (397)
.+.+.|++ .+.+..+ -+ .....++++.|.+.+.+ ..++...|+ ++.++.|...+. ..+
T Consensus 255 ~la~~L~~-~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~~~~~~~~~~~~L~~~~i~~s~G~~~sl~~~p~~~ 333 (378)
T TIGR01329 255 AIAMFLST-HPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETGSVALSKRLVEATKLFSITVSFGSVNSLISMPCFM 333 (378)
T ss_pred HHHHHHHh-CCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEECCHHHHHHHHHhCcCcccccCCCCCCceeeCCCcc
Confidence 88888877 5654222 11 11134567888885434 567788887 677777765543 222
Q ss_pred Chh----hHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHH
Q psy8850 327 EPS----YVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKK 372 (397)
Q Consensus 327 ~~~----~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 372 (397)
.+. ...+..|+.+ +.||+|++. |++|.+++.|++++++
T Consensus 334 ~~~~~~~~~~~~~gi~~----~liR~svGl----E~~~dl~~dl~~al~~ 375 (378)
T TIGR01329 334 SHASIPAEVREERGLPE----DLVRLSVGI----EDVDDLISDLDIAFVT 375 (378)
T ss_pred ccccCCHHHHHhcCCCC----CeEEEEecc----CCHHHHHHHHHHHHHh
Confidence 211 2233555554 899999997 6778888888887764
No 154
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.96 E-value=1.4e-26 Score=213.00 Aligned_cols=279 Identities=16% Similarity=0.125 Sum_probs=200.0
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCC
Q psy8850 41 KAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN 120 (397)
Q Consensus 41 ~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~ 120 (397)
....+++++++++++.++++|++|+|+++++.+++. +. ++++ |++.+|+|+.+...++.. |.+++.+|.+.
T Consensus 40 ~~~~~lr~~ia~~~~~~~~~I~it~Gs~~~l~~~~~-~~----~~~~-vv~~~P~y~~y~~~~~~~---G~~v~~vp~~~ 110 (332)
T PRK06425 40 ISYTDIEDQIKIYTQGLKIKVLIGPGLTHFIYRLLS-YI----NVGN-IIIVEPNFNEYKGYAFTH---GIRISALPFNL 110 (332)
T ss_pred cCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHH-Hh----CCCc-EEEeCCChHHHHHHHHHc---CCeEEEEeCCc
Confidence 357889999999999999999999999999999887 44 5654 666689999999888887 99999999875
Q ss_pred CCCCCHHHHHHHhcCCceEEEEecccCcccccccH---HHHHHHHHhcCcEEEEecccccCcc----c-ccc-CcccccE
Q psy8850 121 NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPI---LEIGELCRSKGVIFHCDAAQAVGKI----D-INI-QNYKVDL 191 (397)
Q Consensus 121 ~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l---~~i~~l~~~~gi~livD~a~~~~~~----~-~~~-~~~~~d~ 191 (397)
. .+|.+.+++ .+++++++++|+||||.+++. ++|+++|+++|++||+|++|.-... + ... ...+..+
T Consensus 111 ~-~~~~~~l~~---~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~~~~~~~~~~~~~vi 186 (332)
T PRK06425 111 I-NNNPEILNN---YNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNRAEEDVLLNRSYGNVI 186 (332)
T ss_pred c-cCcHHHHhh---cCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhccccccchhHHHHhccCCCEE
Confidence 3 345555543 478999999999999999994 6677888999999999999872211 1 011 1224568
Q ss_pred EEeccccccCCCC--ceEEEEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8850 192 MSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRL 269 (397)
Q Consensus 192 ~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l 269 (397)
++.|++|.+|.+| +|+++++++..+.+...... ...+......+ .... ....+++..+.++++++++
T Consensus 187 ~~~SfSK~~~l~GlRiGy~v~~~~li~~l~~~~~~---------~~~~~~~~~~l-~~~~-~~~~~~~~~~~~~~~r~~l 255 (332)
T PRK06425 187 IGRSLTKILGIPSLRIGYIATDDYNMKISRKITEP---------WSVCDPAIDFI-RSID-LDYVAKHSLDIMENERSYL 255 (332)
T ss_pred EEeecHHhcCCchhhheeeecCHHHHHHHHHcCCC---------CccCHHHHHHH-HHhh-hHHHHHHHHHHHHHHHHHH
Confidence 8899999777556 79999887665555432211 11111111111 1111 1223466788899999999
Q ss_pred HHHHhhhcCcEEEeCCCCCCCCceEEEEecCCChHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEE
Q psy8850 270 YNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIR 347 (397)
Q Consensus 270 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iR 347 (397)
.+.|++ + ++.+..++. +.++++.++ +..++.+.|. ||.+.+|..|.. .+.+++|
T Consensus 256 ~~~L~~-~-g~~~~~~~~---g~f~~~~~~--~~~~~~~~l~~~gi~v~~~~~f~~-----------------~~~~~iR 311 (332)
T PRK06425 256 INNLEA-M-GFRAAGDPS---ANFITFMIP--DAHDFYSYLLKNGILVRLLDDYEC-----------------LGEQYIR 311 (332)
T ss_pred HHHHHH-C-CCEECCCCC---ceEEEEEcC--CHHHHHHHHHHCCeEEEECCCCCC-----------------CCCCEEE
Confidence 999998 5 565543322 445666665 5677777765 999999865532 0137999
Q ss_pred EeeCCCCCHHHHHHHHHHHHHHH
Q psy8850 348 FTIGRFTTEKEIDFTIKLLKMKV 370 (397)
Q Consensus 348 i~~~~~~~~~~i~~~~~~l~~~~ 370 (397)
|+++ +.+++++++++|++++
T Consensus 312 is~~---~~~~~~~l~~al~~~~ 331 (332)
T PRK06425 312 IAIR---RRSFNIKLVNALRNFL 331 (332)
T ss_pred EEeC---CHHHHHHHHHHHHHHh
Confidence 9998 5899999999998764
No 155
>PLN02880 tyrosine decarboxylase
Probab=99.96 E-value=2.9e-26 Score=218.70 Aligned_cols=315 Identities=17% Similarity=0.174 Sum_probs=224.7
Q ss_pred CcchhhhHHHHHHHHHHHHHHHhCCCCC-------cEEEeCChhHHHHHHHHHhHhhhc-------cCCCEEEEcCCCCh
Q psy8850 32 NHIYGWTAEKAIEKARNEVAQLIYADPR-------EIIWTSGATESNNLAIKGAAHFYK-------KRGKHIITVQTEHK 97 (397)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~la~~~~~~~~-------~i~~~~g~t~a~~~~l~~l~~~~~-------~~g~~vl~~~~~~~ 97 (397)
.+..++.......++-+++++++|.+.+ ..++|+|||+|+..++.+...... .++-+|++++..|.
T Consensus 113 ~~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~ 192 (490)
T PLN02880 113 SWITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHS 192 (490)
T ss_pred ccccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchH
Confidence 3444566778888999999999999864 488999999999988887654321 12346778999999
Q ss_pred hhHHHHHHHhhCCc---EEEEeccCC--CCCCCHHHHHHHhcC------CceEEEEecccCcccccccHHHHHHHHHhcC
Q psy8850 98 SVLDSIRKLENDGF---RVTYLKPKN--NGLITLSQLEEKICS------DTILVSVMLVNNEIGVIQPILEIGELCRSKG 166 (397)
Q Consensus 98 s~~~~~~~~~~~g~---~v~~v~~~~--~~~~d~~~l~~~i~~------~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~g 166 (397)
|..+++..+ |+ +++.||++. ++.+|+++|+++|.+ .+.+|+.+..++.+|.+.|+++|+++|++||
T Consensus 193 Sv~Kaa~~l---Glg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~ 269 (490)
T PLN02880 193 ALQKACQIA---GIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSNG 269 (490)
T ss_pred HHHHHHHHc---CCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHcC
Confidence 999999988 65 588899974 678999999999964 3678899999999999999999999999999
Q ss_pred cEEEEecccccCcccc-----ccCcc-cccEEEecccc-ccCCCCceEEEEecCCCCccccccccCC------------c
Q psy8850 167 VIFHCDAAQAVGKIDI-----NIQNY-KVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEAQIHGGG------------H 227 (397)
Q Consensus 167 i~livD~a~~~~~~~~-----~~~~~-~~d~~~~s~~K-~~g~~g~g~~~~~~~~~~~~~~~~~~~~------------~ 227 (397)
+++|||++|+.+.... .+..+ ++|+++.++|| ++.|.|+|++++++... .......+.. .
T Consensus 270 iwlHVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~~~g~llvr~~~~-l~~~~~~~~~Yl~~~~~~~~~~~ 348 (490)
T PLN02880 270 MWFHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFLTNFDCSLLWVKDRNA-LIQSLSTNPEFLKNKASQANSVV 348 (490)
T ss_pred CEEEEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcCCCccEEEEEEeCHHH-HHHHHccCHHHhcCccccccCCC
Confidence 9999999999765422 23332 68999999999 67799999999985321 1111111000 0
Q ss_pred ---cccccCCCCchhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCC--
Q psy8850 228 ---EYGLRSGTLATHQIVGMGEAFRLA-RIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFI-- 301 (397)
Q Consensus 228 ---~~~~~~~~~~~~~~~~l~~al~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 301 (397)
......+ .. ...+.++.+++.+ .+++.++.++..++++++.+.|++ .+++.+..++. ..++.|.++..
T Consensus 349 ~~~~~~i~~~-rr-~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~-~~~~el~~~~~---~~iv~Fr~~~~~~ 422 (490)
T PLN02880 349 DYKDWQIPLG-RR-FRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQ-DSRFEVVTPRI---FSLVCFRLVPPKN 422 (490)
T ss_pred ChhccCcCCC-Cc-ccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEecCCc---eEEEEEEEeCCCC
Confidence 0000011 11 1134454555543 557888888888999999999988 88999998755 55667776532
Q ss_pred Ch-------HHHHHHhC---CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCC-CCHHHHHHHHHHHHHHH
Q psy8850 302 EG-------ESLLMAIK---DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRF-TTEKEIDFTIKLLKMKV 370 (397)
Q Consensus 302 ~~-------~~~~~~l~---~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~-~~~~~i~~~~~~l~~~~ 370 (397)
+. .++.+.|. .+.+.... -.+..++|+++... +++++++.+++.|.+..
T Consensus 423 ~~~~~~~~n~~l~~~l~~~g~~~v~~t~--------------------~~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~ 482 (490)
T PLN02880 423 NEDNGNKLNHDLLDAVNSSGKIFISHTV--------------------LSGKYVLRFAVGAPLTEERHVTAAWKVLQDEA 482 (490)
T ss_pred ChhhHHHHHHHHHHHHHhCCCEEEEEEE--------------------ECCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Confidence 11 23444443 23333221 11236899998766 45699999999999998
Q ss_pred HHHHhc
Q psy8850 371 KKLREL 376 (397)
Q Consensus 371 ~~~~~~ 376 (397)
+++.++
T Consensus 483 ~~~~~~ 488 (490)
T PLN02880 483 SKLLGK 488 (490)
T ss_pred HHHHHh
Confidence 887554
No 156
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.96 E-value=6.4e-26 Score=214.84 Aligned_cols=322 Identities=18% Similarity=0.162 Sum_probs=219.0
Q ss_pred CCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCE
Q psy8850 9 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKH 88 (397)
Q Consensus 9 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~ 88 (397)
++|.+++++.+++........ .....+...+...++++.++++++.+ ..++.++|++|+..++..+... .+++.
T Consensus 61 ~~p~v~~a~~~~~~~~~~~~~--~s~~~~g~~~~~~~l~~~la~~~g~~--~~~~~~sG~~an~~ai~~l~~~--~~~~~ 134 (407)
T PRK09064 61 QHPKVIEAMIEALDRCGAGAG--GTRNISGTNHYHVELERELADLHGKE--AALVFTSGYVSNDATLSTLAKL--IPDCV 134 (407)
T ss_pred CCHHHHHHHHHHHHHcCCCCC--CcCcCccCHHHHHHHHHHHHHHhCCC--cEEEECcHHHHHHHHHHHHhCC--CCCCE
Confidence 378899999998876432111 11111223567888999999999964 4455566778888888876532 36677
Q ss_pred EEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhc----CCceEEEEecccCcccccccHHHHHHHHHh
Q psy8850 89 IITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKIC----SDTILVSVMLVNNEIGVIQPILEIGELCRS 164 (397)
Q Consensus 89 vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~----~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~ 164 (397)
|+.....|.+....+... +.++..++.+ |++++++++. +++++|++++++|++|.+.|+++|.++|++
T Consensus 135 i~~~~~~h~s~~~~~~~~---~~~~~~~~~~-----d~~~le~~l~~~~~~~~~~v~~~~v~s~~G~~~~l~~i~~l~~~ 206 (407)
T PRK09064 135 IFSDELNHASMIEGIRRS---RCEKHIFRHN-----DVAHLEELLAAADPDRPKLIAFESVYSMDGDIAPIAEICDLADK 206 (407)
T ss_pred EEEeCcchHHHHHHHHHc---CCcEEEECCC-----CHHHHHHHHHhccCCCCeEEEEeCCCCCCccccCHHHHHHHHHH
Confidence 777777787777666554 6676666543 7888888875 468899999999999999999999999999
Q ss_pred cCcEEEEecccccCcc-c-----cccCc--ccccEEEeccccccCCCCceEEEEecCCCCccccccccCCccccccCCCC
Q psy8850 165 KGVIFHCDAAQAVGKI-D-----INIQN--YKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTL 236 (397)
Q Consensus 165 ~gi~livD~a~~~~~~-~-----~~~~~--~~~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (397)
||+++|+|++|+.|.. + ..... ..+|+++.|++|.+|+.| |+++++++..+.+.....+ ..+..+ .
T Consensus 207 ~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G-G~~~~~~~~~~~l~~~~~~----~~~t~~-~ 280 (407)
T PRK09064 207 YNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFGVMG-GYIAGSAALVDAVRSYAPG----FIFTTS-L 280 (407)
T ss_pred cCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhhhccC-ceEecCHHHHHHHHHhCcc----ccccCc-C
Confidence 9999999999985432 1 01111 146899999999777766 8888876554443322111 112222 3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecC-CChHHHHHHhC---C
Q psy8850 237 ATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF-IEGESLLMAIK---D 312 (397)
Q Consensus 237 ~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~---~ 312 (397)
+....++..++++.+.+. ....+++.++++++.+.|++ + ++.+..+. ..++.+.++. ....++.+.|. |
T Consensus 281 ~~~~~~aa~~al~~~~~~-~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~----~~iv~i~~~~~~~~~~l~~~L~~~~g 353 (407)
T PRK09064 281 PPAIAAAALASIRHLKES-NEERERHQERAAKLKAALDA-A-GIPVMPNE----SHIVPVMVGDPEKCKKASDMLLEEHG 353 (407)
T ss_pred CHHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHH-c-CCCCCCCC----CCEEEEEeCCHHHHHHHHHHHHHhCC
Confidence 334555556788876543 34567888999999999988 3 55544332 3444555543 23456776652 7
Q ss_pred cEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHH
Q psy8850 313 IAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 313 i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 373 (397)
|.+.+..... .+.+.+.+||+++.+++++|+++++++|+++++++
T Consensus 354 i~v~~~~~p~----------------~~~~~~~lRis~~~~~t~edi~~l~~~l~~~~~~~ 398 (407)
T PRK09064 354 IYVQPINYPT----------------VPRGTERLRITPTPFHTDEMIDHLVEALVEVWARL 398 (407)
T ss_pred EEEeeECCCC----------------CCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence 8887642110 01123679999999999999999999999987654
No 157
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=1.9e-26 Score=212.45 Aligned_cols=303 Identities=19% Similarity=0.130 Sum_probs=207.3
Q ss_pred CCCCCC-CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHh
Q psy8850 2 DYSATT-PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAH 80 (397)
Q Consensus 2 ~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~ 80 (397)
+++.+. ++|+.+.+++.+.+.... .. .|. .....++|+++++++++++++|++|+|+++++.+++..+
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~Y~-----~~g~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~-- 92 (337)
T PRK03967 24 DKNENPFDLPEELKEEIFEELKRVP---FN-RYP-----HITSDPLREAIAEFYGLDAENIAVGNGSDELISYLVKLF-- 92 (337)
T ss_pred cCCCCCCCCCHHHHHHHHHHhhcCc---cc-cCC-----CCCHHHHHHHHHHHhCcCcceEEEcCCHHHHHHHHHHHh--
Confidence 334433 567899999988775311 01 121 124678999999999999999999999999998877653
Q ss_pred hhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHH
Q psy8850 81 FYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGE 160 (397)
Q Consensus 81 ~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~ 160 (397)
+||+|+++.|.|+.+....... |.+++.++.+.++.+|++++++.+ ++++++++++|+||||.+++.++|.+
T Consensus 93 ----~gd~V~v~~P~y~~~~~~~~~~---g~~~~~v~~~~~~~~d~~~l~~~~-~~~~~v~~~~P~NPtG~~~~~~~l~~ 164 (337)
T PRK03967 93 ----EGKHIVITPPTFGMYSFYAKLN---GIPVIDVPLKEDFTIDGERIAEKA-KNASAVFICSPNNPTGNLQPEEEILK 164 (337)
T ss_pred ----CCCeEEEeCCChHHHHHHHHHc---CCeEEEeecCCCCCcCHHHHHHhc-cCCCEEEEeCCCCCCCCCCCHHHHHH
Confidence 5799999999998776655555 999999999877789999999865 56889999999999999999999999
Q ss_pred HHHhcCcEEEEecccccCcc-c-cc-cCcccccEEEeccccccCCCC--ceEEEEecCCCCccccccccCCccccccCCC
Q psy8850 161 LCRSKGVIFHCDAAQAVGKI-D-IN-IQNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLRSGT 235 (397)
Q Consensus 161 l~~~~gi~livD~a~~~~~~-~-~~-~~~~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (397)
+++ +++++|+|++|..... + .. .......+++.|++|.+|.+| +|+++++++..+.+...... ..
T Consensus 165 i~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~~~~i~~~~~~~~~---------~~ 234 (337)
T PRK03967 165 VLE-TGKPVVLDEAYAEFSGKSLIGLIDEYPNLILLRTFSKAFGLAGIRAGYAIANEEIIDALYRIKPP---------FS 234 (337)
T ss_pred HHh-cCCEEEEECchhhhcccchHHHHhhCCCEEEEecchHhhcchhhhheeeecCHHHHHHHHhhcCC---------CC
Confidence 995 7999999999972211 1 11 111234578899999666445 79999887655554433211 12
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCChHHHHHHhC--Cc
Q psy8850 236 LATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAIK--DI 313 (397)
Q Consensus 236 ~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~i 313 (397)
.+.....++..+++.. +.+.+..+...+.++.+.+.|.+ . ..+.+ +..+++.++ +.+.|. ||
T Consensus 235 ~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~r~~l~~~L~~-~-----~~~~~---~~~~~~~~~------~~~~l~~~gi 298 (337)
T PRK03967 235 LNILTMKIVRLALDHY-DLIEERIDYIIKERERVRRELGE-Y-----AYPSD---ANFLLLKLD------AYDYLLENGI 298 (337)
T ss_pred CCHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHHHHHhcc-C-----cCCCC---CcEEEEhHH------HHHHHHHCCE
Confidence 3344444444555422 23444555666677778888766 2 11111 334444432 344443 88
Q ss_pred EecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHH
Q psy8850 314 AVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKK 372 (397)
Q Consensus 314 ~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 372 (397)
.+.++... ..+++||+++ +.++.++++++|+++.+.
T Consensus 299 ~v~~~~~~--------------------~~~~~Ri~~~---~~~~~~~l~~~l~~~~~~ 334 (337)
T PRK03967 299 VVRKLSGR--------------------LEGHIRVTVG---KREENDEFIKALKEIKEG 334 (337)
T ss_pred EEEeCCCC--------------------CCCeEEEecC---CHHHHHHHHHHHHHHHHh
Confidence 88754211 1378999997 578889999998876543
No 158
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.96 E-value=3e-26 Score=214.12 Aligned_cols=311 Identities=15% Similarity=0.097 Sum_probs=213.7
Q ss_pred CcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHH-HhhCC
Q psy8850 32 NHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRK-LENDG 110 (397)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~-~~~~g 110 (397)
.+.+++...+...++++.++++.|.+ ..++++||++|+..++.++. ++||+|+++.+.|+++...+.. +...|
T Consensus 55 ~~~y~r~~~p~~~~le~~lA~l~g~~--~~i~~ssG~~Ai~~~l~all----~~GD~Vi~~~~~y~~~~~~~~~~~~~~G 128 (398)
T PRK08249 55 GHIYSRNTNPTVQAFEEKVRILEGAE--AATAFSTGMAAISNTLYTFL----KPGDRVVSIKDTYGGTNKIFTEFLPRMG 128 (398)
T ss_pred CccccCCCChHHHHHHHHHHHHhCCC--eEEEeCChHHHHHHHHHHhc----CCCCEEEEcCCchHHHHHHHHHHHhhCC
Confidence 34555666778899999999999976 46777888899999998887 7999999999999988766654 33448
Q ss_pred cEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCccccccCccccc
Q psy8850 111 FRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVD 190 (397)
Q Consensus 111 ~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d 190 (397)
++++.++. .|++++++++++++++|++++|+||+|.+.|+++|+++|+++|+++|+|++++.+..... ...++|
T Consensus 129 i~v~~vd~-----~d~e~l~~~i~~~tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD~t~a~~~~~~~-l~~~~D 202 (398)
T PRK08249 129 VDVTLCET-----GDHEQIEAEIAKGCDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVDNTFATPINQNP-LALGAD 202 (398)
T ss_pred eEEEEcCC-----CCHHHHHHhcCCCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCcCccccCCc-hhhCCC
Confidence 88887764 489999999999999999999999999999999999999999999999999985543221 234799
Q ss_pred EEEeccccccCCCC---ceEEEEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8850 191 LMSFSAHKIYGPKG---IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQK 267 (397)
Q Consensus 191 ~~~~s~~K~~g~~g---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~ 267 (397)
+++.|++|++|+.| .|+++.+++....+..... ...+..+....+.+...++. +..+.++..+++.
T Consensus 203 ivv~S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~~~-------~~g~~~s~~~a~l~l~~l~t----L~~R~~~~~~na~ 271 (398)
T PRK08249 203 LVIHSATKFLSGHADALGGVVCGSKELMEQVYHYRE-------INGATMDPMSAYLILRGMKT----LKLRVRQQQESAM 271 (398)
T ss_pred EEeccCceecCCCCCceEEEEECCHHHHHHHHHHHH-------hcCCCCCHHHHHHHHhCcch----HHHHHHHHHHHHH
Confidence 99999999555433 3666665544444432211 11122333323322233433 3456677788888
Q ss_pred HHHHHHhhhcCcEEEeCCCC--------------CCCCceEEEEecCC--ChHHHHHHhC--CcEecccCccCC----CC
Q psy8850 268 RLYNGLMESIEEIYINGDMN--------------NRIPHNLNISFNFI--EGESLLMAIK--DIAVSSGSACTS----AS 325 (397)
Q Consensus 268 ~l~~~l~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~--~~~~~~~~l~--~i~~~~g~~~~~----~~ 325 (397)
.+.+.|++ .+.+..+.-|+ ...++++.|.+++. ...++.+.|+ .+...-|...+. ..
T Consensus 272 ~la~~L~~-~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~sf~~~~~~~~~~~f~~~l~l~~~~~s~G~~~sl~~~~~~ 350 (398)
T PRK08249 272 ALAKYLQT-HPKVEAVYYPGLETHPNHEIAKAQMRGFGGILSFVLKGGMDTVKRLLPKLRYAHRAANLGAVETIYGPART 350 (398)
T ss_pred HHHHHHHc-CCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEEcCCHHHHHHHHHhCCcceEccCCCCCCceeeCCcc
Confidence 89999988 77665332221 13467888888642 1345556665 344444543332 11
Q ss_pred CCh----hhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHHH
Q psy8850 326 LEP----SYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKLR 374 (397)
Q Consensus 326 ~~~----~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 374 (397)
+.+ ....+..|+.+ +.||+|++. |+.|.+++.|.++++.++
T Consensus 351 ~~~~~~~~~~~~~~gi~~----~liR~svGl----E~~~dl~~dl~~al~~~~ 395 (398)
T PRK08249 351 TSHVENTLEERAALGIPE----GLVRISVGI----EDTEDLIADLEQAFAHLE 395 (398)
T ss_pred cccccCCHHHHHhcCCCC----CeEEEEecc----CCHHHHHHHHHHHHHHhh
Confidence 211 11233455554 899999997 677777777777776543
No 159
>PRK05839 hypothetical protein; Provisional
Probab=99.96 E-value=4.5e-26 Score=213.02 Aligned_cols=313 Identities=13% Similarity=-0.005 Sum_probs=203.0
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhC--CCCCcEEEeCChhHHHHHHHHHhHhhhccC
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIY--ADPREIIWTSGATESNNLAIKGAAHFYKKR 85 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~--~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~ 85 (397)
++++.+.+++.+...... .|..........+.+.+.+++.+| +++++|++|+|+++|+..++.+++. .++
T Consensus 37 ~~~~~~~~a~~~~~~~~~------~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~al~~~~~~~~~--~~~ 108 (374)
T PRK05839 37 ETPKFIQDALKNNAHLLN------KYPKSAGEESLREAQRGFFKRRFKIELKENELIPTFGTREVLFNFPQFVLF--DKQ 108 (374)
T ss_pred CCCHHHHHHHHHHhhccC------CCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHHhc--CCC
Confidence 456777777776543211 222112223344455555566657 5788999999999999988886641 036
Q ss_pred CCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCC--CCCCHHHHHHHhcCCceEEEEecccCccccccc---HHHHHH
Q psy8850 86 GKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNN--GLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---ILEIGE 160 (397)
Q Consensus 86 g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~--~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~---l~~i~~ 160 (397)
|+.|+++.|+|+.+...+... |.+++.++.+.+ +.+|+++. .+ ++++++++++|+||||.+++ +++|++
T Consensus 109 gd~vlv~~P~y~~~~~~~~~~---g~~v~~v~~~~~~~~~~d~~~~--~~-~~~k~v~i~nP~NPTG~~~s~~~l~~i~~ 182 (374)
T PRK05839 109 NPTIAYPNPFYQIYEGAAIAS---RAKVLLMPLTKENDFTPSLNEK--EL-QEVDLVILNSPNNPTGRTLSLEELIEWVK 182 (374)
T ss_pred CCEEEECCCCchhhHHHHHhc---CCEEEEeecccccCCcCCcchh--hh-ccccEEEEeCCCCCcCcccCHHHHHHHHH
Confidence 899999999999999888776 999999999743 34444332 23 46899999999999999999 467888
Q ss_pred HHHhcCcEEEEecccccCcc--c-ccc---------CcccccEEEeccccccCCCC--ceEEEEecCCCCccccccccCC
Q psy8850 161 LCRSKGVIFHCDAAQAVGKI--D-INI---------QNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGG 226 (397)
Q Consensus 161 l~~~~gi~livD~a~~~~~~--~-~~~---------~~~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~ 226 (397)
+|+++|++||+|++|+.... + ..+ ...+..+++.|++|.+|.+| +|+++.+++....+......
T Consensus 183 ~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~~~~~~~~~~~~~~~-- 260 (374)
T PRK05839 183 LALKHDFILINDECYSEIYENTPPPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIAGDASILKKYKAYRTY-- 260 (374)
T ss_pred HHHHcCCEEEeccchhhcccCCCCCCHhhhhcccCccccCcEEEEeccccccCCccceeEEEecCHHHHHHHHHHHhh--
Confidence 89999999999999873210 1 111 11245688999999655445 78888876555544332210
Q ss_pred ccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCChHHH
Q psy8850 227 HEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESL 306 (397)
Q Consensus 227 ~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (397)
...+. +.....++..++.. .+.++++++++.++++.+.+.|.. . .+.+ +.++++.++ +..++
T Consensus 261 ----~~~~~-~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~l~~-----~--~p~g---g~fi~~~~~--~~~~~ 322 (374)
T PRK05839 261 ----LGCAS-PLPLQKAAAVAWLD-DEHAEFFRNIYAKNLKLAREILGI-----T--IPPA---TFYVWLPVD--NDEEF 322 (374)
T ss_pred ----cCCCC-ChHHHHHHHHHhcc-chHHHHHHHHHHHHHHHHHHhcCC-----C--CCCe---eEEEEEeCC--ChHHH
Confidence 01112 22223333233321 334566777777777777665421 1 1211 445555554 35667
Q ss_pred HHHhC---CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHH
Q psy8850 307 LMAIK---DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVK 371 (397)
Q Consensus 307 ~~~l~---~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 371 (397)
...+. ||.+.+|..|.. .....+++||+++. +.+++++++++|.++++
T Consensus 323 ~~~l~~~~gi~v~pg~~f~~---------------~~~~~~~iRis~~~--~~~~~~~~l~~l~~~l~ 373 (374)
T PRK05839 323 TKKLYQNEGIKVLPGSFLGR---------------NGIGKGYVRIALVY--DTPKLEKALEIIKTYLE 373 (374)
T ss_pred HHHHHHHCCEEEeCchhhCC---------------CCCCCCeEEEEecC--CHHHHHHHHHHHHHHhh
Confidence 66662 899999865432 01123899999974 69999999999988764
No 160
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.95 E-value=9.7e-27 Score=216.69 Aligned_cols=306 Identities=18% Similarity=0.163 Sum_probs=214.0
Q ss_pred cchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHH-hhCCc
Q psy8850 33 HIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKL-ENDGF 111 (397)
Q Consensus 33 ~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~-~~~g~ 111 (397)
+.+++...+...++++.+++++|.+ ..++++||++|+..++.++. ++||+|+++.+.|+++...+... ...|.
T Consensus 32 ~~y~r~~~p~~~~le~~la~l~g~~--~a~~~~sG~~Ai~~~l~~l~----~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~ 105 (369)
T cd00614 32 YIYSRIGNPTVDALEKKLAALEGGE--AALAFSSGMAAISTVLLALL----KAGDHVVASDDLYGGTYRLFERLLPKLGI 105 (369)
T ss_pred ceeECCCChhHHHHHHHHHHHHCCC--CEEEEcCHHHHHHHHHHHHc----CCCCEEEECCCCcchHHHHHHHHHhhcCe
Confidence 4445555678899999999999975 67788999999999999887 79999999999999988766543 34488
Q ss_pred EEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCccccccCcccccE
Q psy8850 112 RVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDL 191 (397)
Q Consensus 112 ~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~ 191 (397)
++..++.+ |++++++++++++++|++++++||+|.+.|+++|+++|++||+++|+|++++.+... ....+++|+
T Consensus 106 ~~~~v~~~-----d~~~l~~~i~~~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD~t~~~~~~~-~~~~~g~Di 179 (369)
T cd00614 106 EVTFVDPD-----DPEALEAAIKPETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNTFATPYLQ-RPLELGADI 179 (369)
T ss_pred EEEEeCCC-----CHHHHHHhcCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcchhcC-ChhhhCCcE
Confidence 99888865 689999999989999999999999999999999999999999999999999876542 222447899
Q ss_pred EEeccccccCCCC---ceEEEEec-CCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8850 192 MSFSAHKIYGPKG---IGALYIRR-NPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQK 267 (397)
Q Consensus 192 ~~~s~~K~~g~~g---~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~ 267 (397)
++.|++|.+++.| .|+++.++ +..+.+...... ..+..+....+.+...++ .+..+.++..+++.
T Consensus 180 vv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~-------~g~~~~p~~a~~~l~~l~----tl~~r~~~~~~na~ 248 (369)
T cd00614 180 VVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLRLA-------LGTILSPFDAWLLLRGLK----TLPLRMERHSENAL 248 (369)
T ss_pred EEeccceeccCCCCceEEEEEeCcHHHHHHHHHHHHh-------hCCCCCHHHHHHHHcCCC----CHHHHHHHHHHHHH
Confidence 9999999544333 68888876 444444332211 011222222222222332 34556778888999
Q ss_pred HHHHHHhhhcCcEEEeCCCC--------------CCCCceEEEEecCC--ChHHHHHHhC--CcEecccCccCC----CC
Q psy8850 268 RLYNGLMESIEEIYINGDMN--------------NRIPHNLNISFNFI--EGESLLMAIK--DIAVSSGSACTS----AS 325 (397)
Q Consensus 268 ~l~~~l~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~--~~~~~~~~l~--~i~~~~g~~~~~----~~ 325 (397)
++.+.|++ .+.+..+..+. ...++++.|.+++. ...++.+.|+ .+...-|...+. ..
T Consensus 249 ~la~~L~~-~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~ 327 (369)
T cd00614 249 KVAEFLEK-HPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKGGLEAAKKFLNALKLFSLAVSLGGVESLVEHPAS 327 (369)
T ss_pred HHHHHHHc-CCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeCCCHHHHHHHHHcCCcceEcccCCCCceeeeCCcc
Confidence 99999998 77654332221 23467888888631 1344555555 334444444332 11
Q ss_pred CChh----hHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHH
Q psy8850 326 LEPS----YVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKV 370 (397)
Q Consensus 326 ~~~~----~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~ 370 (397)
..+. ...+..|+.+ +.||+|++. |++|.+++.|.+++
T Consensus 328 ~~~~~~~~~~~~~~g~~~----~liR~svGl----E~~~dl~~dl~~al 368 (369)
T cd00614 328 MTHSQLPPEERAAAGITP----GLVRLSVGI----EDVEDLIADLEQAL 368 (369)
T ss_pred cccccCCHHHHHhcCCCC----CeEEEEeCc----CCHHHHHHHHHHhh
Confidence 1111 1233455554 899999997 67888888887764
No 161
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.95 E-value=2.2e-26 Score=217.32 Aligned_cols=320 Identities=15% Similarity=0.102 Sum_probs=211.4
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHh---CCCCCcEEEeCChhHHHHHHHHHhHhhhcc
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLI---YADPREIIWTSGATESNNLAIKGAAHFYKK 84 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~---~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~ 84 (397)
++++.+.+++.+.+.+...... ..+|.......++++++++++ ++++++|++|+|+++++..+. .+. .
T Consensus 46 ~~~~~v~~~~~~~~~~~~~~~~----~~~Y~p~~g~~~lr~aia~~~~~~~~~~d~I~it~Ga~~al~~l~-~l~----~ 116 (402)
T TIGR03542 46 PLPASVIEAFHNAVDELASEET----FRGYGPEQGYPFLREAIAENDYRGRIDPEEIFISDGAKCDVFRLQ-SLF----G 116 (402)
T ss_pred CCCHHHHHHHHHHHhccccccc----ccCCCCCCCCHHHHHHHHHHHHhcCCCHHHEEECCCcHHHHHHHH-Hhc----C
Confidence 4578899999988865321111 011222345678888898876 678889999999999998764 444 6
Q ss_pred CCCEEEEcCCCChhhHHHHHHHhhCCc-----------EEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccc
Q psy8850 85 RGKHIITVQTEHKSVLDSIRKLENDGF-----------RVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQ 153 (397)
Q Consensus 85 ~g~~vl~~~~~~~s~~~~~~~~~~~g~-----------~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~ 153 (397)
+|++|++.+|+|+.+...++.. |. +++.++.++.+.++++ +++ .+++++|++++|+||||.++
T Consensus 117 ~gd~Vlv~~P~y~~~~~~~~~~---g~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~--~~~~~~i~l~nP~NPTG~~~ 190 (402)
T TIGR03542 117 SDNTVAVQDPVYPAYVDSNVMA---GRAGVLDDDGRYSKITYLPCTKENNFIPD-LPE--EPKIDIIYLCSPNNPTGTVL 190 (402)
T ss_pred CCCEEEEeCCCCcchHHHHHHc---CCccccccccccceEEEeecchhhCCCCC-ccc--cCCceEEEEeCCCCCCCccC
Confidence 8899999999999998888777 77 8888888643223332 211 25789999999999999999
Q ss_pred c---HHHHHHHHHhcCcEEEEecccccCc----cccccCcc----cccEEEeccccccCCCC--ceEEEEecCCCCcc--
Q psy8850 154 P---ILEIGELCRSKGVIFHCDAAQAVGK----IDINIQNY----KVDLMSFSAHKIYGPKG--IGALYIRRNPRTRI-- 218 (397)
Q Consensus 154 ~---l~~i~~l~~~~gi~livD~a~~~~~----~~~~~~~~----~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~-- 218 (397)
+ +++|+++|++||++||+|++|.... .+..+..+ +..+++.|++|.+|.+| +|++++++++....
T Consensus 191 s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG~~i~~~~l~~~~~~ 270 (402)
T TIGR03542 191 TKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTGVRLGWTVVPKELTYADGH 270 (402)
T ss_pred CHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCccccCCCCcceEEEEecHHHhhcchh
Confidence 9 6788999999999999999987321 11111111 23577899999776545 79988886654111
Q ss_pred --ccccccCCccccccCCCCchhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEE
Q psy8850 219 --EAQIHGGGHEYGLRSGTLATHQIVGMGEAFRL-ARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLN 295 (397)
Q Consensus 219 --~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 295 (397)
....... ......+.+.....+...+++. ....+.+..+.+.++++.+.+.|++ . ++.+..+.. +..++
T Consensus 271 ~~~~~~~~~---~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~-~-~~~~~~~~~---~~f~~ 342 (402)
T TIGR03542 271 SVIQDWERR---QCTKFNGASYPVQRAAEAAYAGEGLQPILEAISYYMENARILRKALEA-A-GFKVYGGEH---APYLW 342 (402)
T ss_pred hHHHHHHHH---hhhcccCCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHh-c-CceecCCCc---eeEEE
Confidence 1010000 0000112232332322233321 1123455667788888999999988 4 555443322 45777
Q ss_pred EEecC-CChHHHHHHhC---CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHH
Q psy8850 296 ISFNF-IEGESLLMAIK---DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (397)
Q Consensus 296 ~~~~~-~~~~~~~~~l~---~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 369 (397)
+.++. .++.++...+. +|.+.+|..|.. ...+++||++.. +++++++++++|+++
T Consensus 343 v~l~~~~~~~~l~~~l~~~~gv~v~pg~~f~~-----------------~~~~~iRis~~~--~~~~l~~~l~~l~~~ 401 (402)
T TIGR03542 343 VKTPEGISSWDFFDFLLYQYHVVGTPGSGFGP-----------------SGEGFVRFSAFG--KRENIVEACERIKEA 401 (402)
T ss_pred EECCCCCCHHHHHHHHHHhCCEEEeCchhhCC-----------------CCCCEEEEEecC--CHHHHHHHHHHHHhh
Confidence 88864 35667776653 899999865532 113789999754 789999999999865
No 162
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.95 E-value=6.8e-26 Score=213.47 Aligned_cols=320 Identities=16% Similarity=0.135 Sum_probs=220.2
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCC
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGK 87 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~ 87 (397)
++++.+.+++.+++.... .... .+.......+...++++.++++++.+ +.+++++| ++++..++.++. ++||
T Consensus 47 ~~~~~~~~a~~~~~~~~~-~~~~-~~~~~~g~~~l~~~l~~~l~~~~g~~-~~i~~~sG-~~a~~~a~~~~~----~~gd 118 (385)
T TIGR01825 47 ADHPRLKEAAAQAIQQYG-VGAG-AVRTIAGTLRLHEELEEKLAKFKKTE-AALVFQSG-FNTNQGVLSALL----RKGD 118 (385)
T ss_pred CCCHHHHHHHHHHHHHcC-CCCC-ccCcccCCcHHHHHHHHHHHHHhCCC-cEEEECcH-HHHHHHHHHHhC----CCCC
Confidence 378899999999886532 1111 12222233567888999999999975 35666555 678888888776 7899
Q ss_pred EEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcC----CceEEEEecccCcccccccHHHHHHHHH
Q psy8850 88 HIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS----DTILVSVMLVNNEIGVIQPILEIGELCR 163 (397)
Q Consensus 88 ~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~----~~~~v~~~~~~~~tG~~~~l~~i~~l~~ 163 (397)
+|++..+.|+++...+... |.++..++ .+|++++++.+.+ ++++|++++++|++|.+.|+++|.++|+
T Consensus 119 ~vi~~~~~~~~~~~~~~~~---g~~~~~~~-----~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~~~~~i~~l~~ 190 (385)
T TIGR01825 119 IVLSDELNHASIIDGLRLT---KATKKIYK-----HADMDDLDRVLRENPSYGKKLIVTDGVFSMDGDVAPLPEIVELAE 190 (385)
T ss_pred EEEEEccccHHHHHHHHhc---CCceEEeC-----CCCHHHHHHHHHhhccCCCeEEEEecCCcCCCCccCHHHHHHHHH
Confidence 9999999999998776654 77766654 3688888887753 6889999999999999999999999999
Q ss_pred hcCcEEEEecccccCccc---------cccCcccccEEEeccccccCCCCceEEEEecCCCCccccccccCCccccccCC
Q psy8850 164 SKGVIFHCDAAQAVGKID---------INIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSG 234 (397)
Q Consensus 164 ~~gi~livD~a~~~~~~~---------~~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (397)
+||+++|+|++|+.+... ++.. .+.|+++.|++|.+|..| |+++.+++..+.+....... ...+
T Consensus 191 ~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~g-G~~~~~~~~~~~~~~~~~~~-----~~~~ 263 (385)
T TIGR01825 191 RYGAVTYVDDAHGSGVMGEAGRGTVHHFGLE-DKVDIQVGTLSKAIGVVG-GYAAGHKELIEYLKNRARPF-----LFST 263 (385)
T ss_pred HhCCEEEEECcccccCcCCCCCccHhhcCCC-cCCcEEEEeccHHhhcCC-CEEecCHHHHHHHHHhCccc-----cccC
Confidence 999999999999755322 2222 467899999999666655 88887765544443221100 0112
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecC-CChHHHHHHhC--
Q psy8850 235 TLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF-IEGESLLMAIK-- 311 (397)
Q Consensus 235 ~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~-- 311 (397)
..+...++++.++++.+.+. .+..+++.++++++.+.|++ + ++.+..+.. .++.+.++. .+..++...|.
T Consensus 264 ~~~~~~~~a~~~al~~~~~~-~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~----~~~~~~~~~~~~~~~~~~~L~~~ 336 (385)
T TIGR01825 264 AQPPAVVAALAAAVDELQRS-PELMERLWDNTRFFKAGLGK-L-GYDTGGSET----PITPVVIGDEKAAQEFSRRLFDE 336 (385)
T ss_pred CCCHHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHH-c-CCCCCCCCC----CEEEEEECCHHHHHHHHHHHHHC
Confidence 23445566666777765432 34667778889999999988 4 665554322 233444432 13456766664
Q ss_pred CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHH
Q psy8850 312 DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 312 ~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 373 (397)
||.+..+.+... ..+...||++++..++++++++++++|+++++++
T Consensus 337 gi~v~~~~~~~~----------------~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~~~~~ 382 (385)
T TIGR01825 337 GIFAQSIVFPTV----------------PRGTARIRNIPTAEHTKDDLDQALDAYEKVGKEL 382 (385)
T ss_pred CcEEcccCCCCC----------------CCCCceEEEEEcCCCCHHHHHHHHHHHHHHHHHh
Confidence 777753321110 1123689999998899999999999999988653
No 163
>PLN02590 probable tyrosine decarboxylase
Probab=99.95 E-value=1.5e-25 Score=213.67 Aligned_cols=336 Identities=13% Similarity=0.141 Sum_probs=232.5
Q ss_pred HHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCC-------cEEEeCChhHHHHHHHHHhHhhhc--
Q psy8850 13 VVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPR-------EIIWTSGATESNNLAIKGAAHFYK-- 83 (397)
Q Consensus 13 v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~-------~i~~~~g~t~a~~~~l~~l~~~~~-- 83 (397)
....+.+.+.... |.....+..++...+...++.+++++++|.+.+ ..++++|||+|+..++.+......
T Consensus 143 ~~~~lgd~l~sa~-n~~~~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~ 221 (539)
T PLN02590 143 VAGFLGEMLNAGL-SVVGFTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKK 221 (539)
T ss_pred HHHHHHHHHHHhc-ccccCCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhh
Confidence 3344444444433 222214555667778889999999999999863 488999999999888877554221
Q ss_pred -----cCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccC--CCCCCCHHHHHHHhcC------CceEEEEecccCccc
Q psy8850 84 -----KRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPK--NNGLITLSQLEEKICS------DTILVSVMLVNNEIG 150 (397)
Q Consensus 84 -----~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~i~~------~~~~v~~~~~~~~tG 150 (397)
.++-.|++++..|.|..+++..++-...+++.||++ .++.||+++|+++|.+ .|.+|+.+..++.+|
T Consensus 222 ~g~~~~~~~vvy~S~~aH~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tG 301 (539)
T PLN02590 222 VGKTLLPQLVVYGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSA 301 (539)
T ss_pred hcccCCCCEEEEecCCchHHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCc
Confidence 123467789999999999998882212268889988 4578999999999965 367899999999999
Q ss_pred ccccHHHHHHHHHhcCcEEEEecccccCcccc-cc----Cc-ccccEEEecccc-ccCCCCceEEEEecCCC--Ccc---
Q psy8850 151 VIQPILEIGELCRSKGVIFHCDAAQAVGKIDI-NI----QN-YKVDLMSFSAHK-IYGPKGIGALYIRRNPR--TRI--- 218 (397)
Q Consensus 151 ~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~-~~----~~-~~~d~~~~s~~K-~~g~~g~g~~~~~~~~~--~~~--- 218 (397)
.+.|+++|+++|++||+|+|||+|++...... .. .. -.+|+++.++|| ++.|.++|+++++++.. ..+
T Consensus 302 aiDpl~~Ia~i~~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p~~cg~llvr~~~~l~~a~~~~ 381 (539)
T PLN02590 302 AVDPLVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQTCSPLWVKDRYSLIDALKTN 381 (539)
T ss_pred ccCCHHHHHHHHHHhCCeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcCcCEEEEEecCHHHHHHHhhcC
Confidence 99999999999999999999999999654321 11 11 158999999999 67788999999996421 111
Q ss_pred ccccccC---------CccccccCCCCchhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCC
Q psy8850 219 EAQIHGG---------GHEYGLRSGTLATHQIVGMGEAFRLA-RIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNN 288 (397)
Q Consensus 219 ~~~~~~~---------~~~~~~~~~~~~~~~~~~l~~al~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 288 (397)
..++... ........+ .. ...+.++.+++.+ .+++.++.++..++++++.+.|++ .+++.++.++.
T Consensus 382 ~~YL~~~~~~~~~~~d~~d~~i~ls-Rr-~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~-~~~fel~~~~~- 457 (539)
T PLN02590 382 PEYLEFKVSKKDTVVNYKDWQISLS-RR-FRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQ-DPSFEVVTTRY- 457 (539)
T ss_pred HHHhCCcccccccCCCccccCCCCC-Cc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEecCCc-
Confidence 1111100 000111111 22 3456666777765 568999999999999999999999 89999998754
Q ss_pred CCCceEEEEecCC--C---hH----HHHHHhC--C-cEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeC-CCCC
Q psy8850 289 RIPHNLNISFNFI--E---GE----SLLMAIK--D-IAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIG-RFTT 355 (397)
Q Consensus 289 ~~~~~~~~~~~~~--~---~~----~~~~~l~--~-i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~-~~~~ 355 (397)
..+++|++... + .. ++.+.+. | +.+.+.. -.+..+||+++. ..++
T Consensus 458 --l~iVcFr~~~~~~~~~~~~~ln~~l~~~l~~~G~~~vs~t~--------------------~~g~~~lR~~i~n~~T~ 515 (539)
T PLN02590 458 --FSLVCFRLAPVDGDEDQCNERNRELLAAVNSTGKIFISHTA--------------------LSGKFVLRFAVGAPLTE 515 (539)
T ss_pred --eEEEEEEecCCCCCHHHHHHHHHHHHHHHHhCCCEEEEeeE--------------------ECCEEEEEEEecCCCCC
Confidence 45666665421 1 12 3333333 2 2222211 112368999986 4478
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q psy8850 356 EKEIDFTIKLLKMKVKKLRE 375 (397)
Q Consensus 356 ~~~i~~~~~~l~~~~~~~~~ 375 (397)
+++|+.+++.|.+...++.+
T Consensus 516 ~~dv~~~~~~i~~~a~~~~~ 535 (539)
T PLN02590 516 EKHVTEAWQIIQKHASKFTR 535 (539)
T ss_pred HHHHHHHHHHHHHHHHHhcc
Confidence 99999999999988766543
No 164
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.95 E-value=4.1e-26 Score=212.43 Aligned_cols=308 Identities=19% Similarity=0.161 Sum_probs=212.6
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCC
Q psy8850 41 KAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN 120 (397)
Q Consensus 41 ~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~ 120 (397)
+...++++.+++++|.+ ++++++|||+|+..++.++.. ++|++|+++.++|.++..++... |.+++.++.++
T Consensus 18 ~~~~~~~~~la~~~~~~--~~~~~~sgt~al~~~l~~l~~---~~gd~vl~~~~~~~~~~~~~~~~---g~~~~~~~~~~ 89 (352)
T cd00616 18 PKVREFEKAFAEYLGVK--YAVAVSSGTAALHLALRALGI---GPGDEVIVPSFTFVATANAILLL---GATPVFVDIDP 89 (352)
T ss_pred HHHHHHHHHHHHHhCCC--eEEEECCHHHHHHHHHHHcCC---CCCCEEEeCCcchHHHHHHHHHc---CCeEEEEecCC
Confidence 36788999999999975 688899999999999998732 68899999999999998877766 99999999986
Q ss_pred -CCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCcccccc-CcccccEEEeccc-
Q psy8850 121 -NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINI-QNYKVDLMSFSAH- 197 (397)
Q Consensus 121 -~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~-~~~~~d~~~~s~~- 197 (397)
++.+|++++++++++++++|++++ ++|...|+++|.++|+++|+++|+|++|+.|....+. .....|+.++|++
T Consensus 90 ~~~~~d~~~l~~~i~~~~~~v~~~~---~~G~~~~~~~i~~l~~~~~i~li~D~a~~~g~~~~~~~~~~~~d~~~~S~~~ 166 (352)
T cd00616 90 DTYNIDPELIEAAITPRTKAIIPVH---LYGNPADMDAIMAIAKRHGLPVIEDAAQALGATYKGRKVGTFGDAGAFSFHP 166 (352)
T ss_pred CcCCcCHHHHHHhcCcCCeEEEEEC---CCCCcCCHHHHHHHHHHcCCeEEEECCCCCCCeECCEEcccCcceeEEcCCC
Confidence 788999999999988999998875 5899999999999999999999999999988654321 1112578888866
Q ss_pred -cccCCCCceEEEEec-CCCCccccccccCCccc---------cccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8850 198 -KIYGPKGIGALYIRR-NPRTRIEAQIHGGGHEY---------GLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQ 266 (397)
Q Consensus 198 -K~~g~~g~g~~~~~~-~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~ 266 (397)
|+++....|+++.++ +..+.++.....+.... ++..+.++....+++ . ..+.++++.++.+++.
T Consensus 167 ~K~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~----~-~l~~~~~~~~~~~~~~ 241 (352)
T cd00616 167 TKNLTTGEGGAVVTNDEELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEIQAAIGL----A-QLEKLDEIIARRREIA 241 (352)
T ss_pred CCCCcccCceEEEECCHHHHHHHHHHHHcCCCCCCCccccceeeeccCcCHHHHHHHH----H-HHHhhHHHHHHHHHHH
Confidence 955432347777764 34443433222211100 011112222222222 1 1234577788889999
Q ss_pred HHHHHHHhhhcCcEEEeCCCCC--CCCceEEEEec---CCChHHHHHHhC--CcEecccCccCCCCCChhhHH----Hh-
Q psy8850 267 KRLYNGLMESIEEIYINGDMNN--RIPHNLNISFN---FIEGESLLMAIK--DIAVSSGSACTSASLEPSYVL----RA- 334 (397)
Q Consensus 267 ~~l~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~---~~~~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~----~~- 334 (397)
+++++.|.+ ++++.+..++.. ..++++.+.++ +.+..++.+.|. ||.+ +.+|.+....+.... ..
T Consensus 242 ~~~~~~L~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gI~~--~~~~~~~~~~~~~~~~~~~~~~ 318 (352)
T cd00616 242 ERYKELLAD-LPGIRLPDVPPGVKHSYHLYVIRLDPEAGESRDELIEALKEAGIET--RVHYPPLHHQPPYKKLLGYPPG 318 (352)
T ss_pred HHHHHHhcC-CCCccCCCCCCCCceeeEEEEEEECCcCCCCHHHHHHHHHHCCCCe--eeecCccccCHhhhhccCCCcC
Confidence 999999998 888887755331 23456677766 456788888887 6643 344444211110000 00
Q ss_pred -hCCCccccCceEEEeeCCCCCHHHHHHHHHHHH
Q psy8850 335 -LGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLK 367 (397)
Q Consensus 335 -~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~ 367 (397)
.........+.||+++..++|++||++++++|+
T Consensus 319 ~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 319 DLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred CChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 000011224789999999999999999999874
No 165
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.95 E-value=2.8e-26 Score=212.36 Aligned_cols=308 Identities=14% Similarity=0.101 Sum_probs=209.4
Q ss_pred hhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHH-HHhhCCcEEE
Q psy8850 36 GWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIR-KLENDGFRVT 114 (397)
Q Consensus 36 ~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~-~~~~~g~~v~ 114 (397)
++...+....+++.++++.+.. ++++++||++|+.+++.+++ ++||+|+++++.|+++...+. .+.+.|.++.
T Consensus 56 ~r~~npt~~~Le~~iA~le~~~--~~~~~~sG~~Ai~~~l~all----~~GD~Vvv~~~~Y~~t~~l~~~~l~~~Gi~v~ 129 (394)
T PRK09028 56 GRRGTPTHFAFQAAIVELEGGA--GTALYPSGAAAISNALLSFL----KAGDHLLMVDSCYEPTRDLCDKILKGFGIETT 129 (394)
T ss_pred cCCCCchHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHHh----CCCCEEEEECCCcHHHHHHHHHhhhhcceEEE
Confidence 3333345678999999998765 68999999999999999887 899999999999988876554 3344588888
Q ss_pred EeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCccccccCcccccEEEe
Q psy8850 115 YLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSF 194 (397)
Q Consensus 115 ~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~~ 194 (397)
.++.+ +.+.++++++++|++|++++|+||+|.+.|+++|+++||++|+++++|++|+.+.. .+...+++|+++.
T Consensus 130 ~v~~~-----~~e~l~~~l~~~TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD~t~a~p~~-~~Pl~~GaDivv~ 203 (394)
T PRK09028 130 YYDPM-----IGEGIRELIRPNTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNTWASPIN-SRPFEMGVDISIQ 203 (394)
T ss_pred EECCC-----CHHHHHHhcCcCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCcccccc-CCccccCceEEEE
Confidence 77644 56889999999999999999999999999999999999999999999999997743 2334569999999
Q ss_pred cccc-ccCCCC--ceEEEEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8850 195 SAHK-IYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYN 271 (397)
Q Consensus 195 s~~K-~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~ 271 (397)
|.+| +.|... .|+++.+++....+..... ......+....+.+...++ .+.-+.++..+++..+.+
T Consensus 204 S~tK~l~Gh~d~~~G~~~~~~~~~~~l~~~~~-------~~G~~~~p~~a~l~~rgl~----TL~lR~~~~~~na~~la~ 272 (394)
T PRK09028 204 AATKYIVGHSDVMLGTATANEKHWDQLREHSY-------LMGQCTSPDDVYLAMRGLR----TLGVRLAQHEKNALKVAN 272 (394)
T ss_pred eCCeEecCCCCEEEEEEECCHHHHHHHHHHHH-------hcCCCCCHHHHHHHHcccC----cHHHHHHHHHHHHHHHHH
Confidence 9999 555533 4655544433222221111 1112333333333323333 255677888888999999
Q ss_pred HHhhhcCcEEEeCCCC--------------CCCCceEEEEecCCC---hHHHHHHhC--CcEecccCccCCC----CCCh
Q psy8850 272 GLMESIEEIYINGDMN--------------NRIPHNLNISFNFIE---GESLLMAIK--DIAVSSGSACTSA----SLEP 328 (397)
Q Consensus 272 ~l~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~---~~~~~~~l~--~i~~~~g~~~~~~----~~~~ 328 (397)
.|++ .|.+.-+.-|+ ...++++.|.+++.+ ..++.+.|+ .+..+-|...+.. ++..
T Consensus 273 ~L~~-~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~f~~~l~l~~~~~slG~~~sLv~~p~~~~~ 351 (394)
T PRK09028 273 WLAT-RPEVDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVLKQGDPKAVTALVEGMQHFKMGFSWGGFESLILGVFGINK 351 (394)
T ss_pred HHhc-CCCccEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHHHhCCcceEecccCCCcceeECCCCcCc
Confidence 9988 77654332111 134678888886322 345666666 4455555444321 1111
Q ss_pred hhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHHHh
Q psy8850 329 SYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKLRE 375 (397)
Q Consensus 329 ~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 375 (397)
....+..|+. ++.||||++. |+.|.+++.|.++++..+.
T Consensus 352 ~~~~~~~~~~----~~liR~svGl----Ed~~dLi~Dl~~Al~~~~~ 390 (394)
T PRK09028 352 LRTATNWDFS----KPLIRLHIGL----EDVDDLIADLEAGFERYNA 390 (394)
T ss_pred cCchhhhcCC----CCeEEEEeCc----CCHHHHHHHHHHHHHHHHH
Confidence 1112223333 3799999997 5677777777777776654
No 166
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.95 E-value=3.4e-26 Score=214.17 Aligned_cols=308 Identities=15% Similarity=0.133 Sum_probs=209.0
Q ss_pred hhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHH-hhCCcEE
Q psy8850 35 YGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKL-ENDGFRV 113 (397)
Q Consensus 35 ~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~-~~~g~~v 113 (397)
+++...+...++++.+++++|++. ..++++|+.|+..++.++. ++||+|+++.+.|+++...+... ...|.++
T Consensus 59 y~r~~~p~~~~Le~~lA~l~G~~~--~~~~~sG~~Ai~~~l~~~l----~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v 132 (398)
T PRK07504 59 YSRYSNPTVDMFEKRMCALEGAED--ARATASGMAAVTAAILCQV----KAGDHVVAARALFGSCRYVVETLLPRYGIES 132 (398)
T ss_pred eecCCCchHHHHHHHHHHHhCCCe--eeEecCHHHHHHHHHHHHh----CCCCEEEEcCCchhHHHHHHHHHHhhcCeEE
Confidence 333344567899999999999984 3457788899988787766 79999999999999887766543 3348888
Q ss_pred EEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCccccccCcccccEEE
Q psy8850 114 TYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMS 193 (397)
Q Consensus 114 ~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~ 193 (397)
+.++ .+|+++++++++++|++|++++|+||+|.+.|+++|.++|+++|+++|+|++|+.+... ....+++|+++
T Consensus 133 ~~vd-----~~d~e~l~~ai~~~tklV~lesp~NptG~v~dl~~I~~la~~~gi~lvvD~a~a~~~~~-~~~~~gaDivv 206 (398)
T PRK07504 133 TLVD-----GLDLDNWEKAVRPNTKVFFLESPTNPTLEVIDIAAVAKIANQAGAKLVVDNVFATPLFQ-KPLELGAHIVV 206 (398)
T ss_pred EEEC-----CCCHHHHHHhcCcCceEEEEECCCCCCcEecCHHHHHHHHHHcCCEEEEECCccccccC-CchhhCCCEEE
Confidence 8886 26899999999999999999999999999999999999999999999999999866543 22345899999
Q ss_pred eccccccCCCC--c-eEEEEecCCCCc-cccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8850 194 FSAHKIYGPKG--I-GALYIRRNPRTR-IEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRL 269 (397)
Q Consensus 194 ~s~~K~~g~~g--~-g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l 269 (397)
+|++|++++.| . |+++.+++.... +...... ....++....+.....++. +..+.++..+++.++
T Consensus 207 ~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~~~~~-------~g~~~s~~~A~~~l~~L~t----l~~R~~~~~~na~~l 275 (398)
T PRK07504 207 YSATKHIDGQGRCLGGVVLSDKAWIEEHLQDYFRH-------TGPSLSPFNAWTLLKGLET----LPVRVRQQTESAAAI 275 (398)
T ss_pred eeccccccCCccceEEEEEeCcHHHHHHHHHHHHH-------hCCCCCHHHHHHHHhccch----HHHHHHHHHHHHHHH
Confidence 99999554333 3 566666543322 2211111 0112222233333234443 455666777888888
Q ss_pred HHHHhhhcCcEEEeCCCC--------------CCCCceEEEEecCC--ChHHHHHHhC--CcEecccCccCC----CCCC
Q psy8850 270 YNGLMESIEEIYINGDMN--------------NRIPHNLNISFNFI--EGESLLMAIK--DIAVSSGSACTS----ASLE 327 (397)
Q Consensus 270 ~~~l~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~--~~~~~~~~l~--~i~~~~g~~~~~----~~~~ 327 (397)
.+.|++ .|++..+.-|+ ...++++.|.+++. ....+.+.|+ .+...-|...+. ..+.
T Consensus 276 a~~L~~-~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~~~~~l~~~~~~~slG~~~sl~~~p~~~~ 354 (398)
T PRK07504 276 ADFLAG-HPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELKGGKEAAFRFLNALKIVRISNNLGDAKSLITHPATTT 354 (398)
T ss_pred HHHHHc-CCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeCCCHHHHHHHHHhCCcceecccCCCCCeeeeCCCCCC
Confidence 889988 77654221111 12367888888632 1345666665 444455543332 2222
Q ss_pred h----hhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHHH
Q psy8850 328 P----SYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKLR 374 (397)
Q Consensus 328 ~----~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 374 (397)
+ ....+..|+.+ +.||||++. |+.|.+++.|++++++.+
T Consensus 355 ~~~~~~~~~~~~gi~~----~liR~svGl----E~~~dl~~dl~~al~~~~ 397 (398)
T PRK07504 355 HKNLSPEARAELGISE----GFLRLSAGL----EDTDDLIEDLAAALKKVR 397 (398)
T ss_pred cccCCHHHHHhcCCCC----CeEEEEecc----CCHHHHHHHHHHHHHhhh
Confidence 1 23345666664 899999997 567777777777776543
No 167
>PLN02271 serine hydroxymethyltransferase
Probab=99.95 E-value=1.3e-25 Score=209.57 Aligned_cols=342 Identities=14% Similarity=0.182 Sum_probs=245.5
Q ss_pred CCCCCCCHHHHHHHHHHHhhcc--CCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCC----CcEEEeCChhHHHHHHHHH
Q psy8850 4 SATTPIDPRVVDKMIPYLRVQF--GNPASRNHIYGWTAEKAIEKARNEVAQLIYADP----REIIWTSGATESNNLAIKG 77 (397)
Q Consensus 4 ~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~----~~i~~~~g~t~a~~~~l~~ 77 (397)
+|...+++.|++++...+...| +.|....|.......++...+.+...++|+++. .+|.. .||+.|+.+++.+
T Consensus 155 ASEN~~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~~gaNVQp-~SGs~AN~aV~~A 233 (586)
T PLN02271 155 ASENFVCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERALAAFGLDSEKWGVNVQP-YSCTSANFAVYTG 233 (586)
T ss_pred cccccCCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCcccccccceee-ccHHHHHHHHHHH
Confidence 4566788999999998887755 566653333333333455558889999999876 45554 3888999999999
Q ss_pred hHhhhccCCCEEEEcCCCChhhHHHHHH------HhhCCcEEEEec--cC-CCCCCCHHHHHH-HhcCCceEEEEecccC
Q psy8850 78 AAHFYKKRGKHIITVQTEHKSVLDSIRK------LENDGFRVTYLK--PK-NNGLITLSQLEE-KICSDTILVSVMLVNN 147 (397)
Q Consensus 78 l~~~~~~~g~~vl~~~~~~~s~~~~~~~------~~~~g~~v~~v~--~~-~~~~~d~~~l~~-~i~~~~~~v~~~~~~~ 147 (397)
++ +|||+|+..+.+|+++...... ....|..+..++ ++ ++|.+|.+++++ +...+|++|++.+..+
T Consensus 234 Ll----~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g~IDyd~lek~a~~~rPKLII~g~Say 309 (586)
T PLN02271 234 LL----LPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGYIDYDKLEEKALDFRPKILICGGSSY 309 (586)
T ss_pred hc----CCCCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccccCccCHHHHHHHhhhcCCeEEEECchhc
Confidence 98 8999999999999888776421 122255555554 54 578999999998 6677999999988887
Q ss_pred cccccccHHHHHHHHHhcCcEEEEecccccCccccccC---cccccEEEecccc-ccCCCCceEEEEecCCCCccccccc
Q psy8850 148 EIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQ---NYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEAQIH 223 (397)
Q Consensus 148 ~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~---~~~~d~~~~s~~K-~~g~~g~g~~~~~~~~~~~~~~~~~ 223 (397)
+ ...|++++.++|+++|+++++|.+|..|.+..+.. ..++|++++|+|| +.||.| |+++++++..........
T Consensus 310 p--r~~D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP~~~aDvvt~TTHKtLrGPrG-G~I~~r~~~~~~~~g~~g 386 (586)
T PLN02271 310 P--REWDYARFRQIADKCGAVLMCDMAHISGLVAAKECVNPFDYCDIVTSTTHKSLRGPRG-GIIFYRKGPKLRKQGMLL 386 (586)
T ss_pred c--CcCCHHHHHHHHHHcCCEEEEECcccccccccCcCCCCCcCCcEEEeCCcccCCCCCc-eEEEecccccccccCCcc
Confidence 7 77899999999999999999999999888754421 2268999999999 889998 888887653322211111
Q ss_pred cCC---------------ccccccCCCCchhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCC
Q psy8850 224 GGG---------------HEYGLRSGTLATHQIVGMGEAFRLARI-EMKEELKRILFLQKRLYNGLMESIEEIYINGDMN 287 (397)
Q Consensus 224 ~~~---------------~~~~~~~~~~~~~~~~~l~~al~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 287 (397)
++. ...++..|+.+ ..++++..++++... .+.++.+++..+++.|.+.|.+ .|+.++..
T Consensus 387 s~s~~~~~~d~~~kI~~aVfPglqgGphn-~~IAalAvalkea~~~efk~Ya~QVv~NAkaLA~~L~~--~G~~vv~g-- 461 (586)
T PLN02271 387 SHGDDNSHYDFEEKINFAVFPSLQGGPHN-NHIAALAIALKQVATPEYKAYMQQVKKNAQALASALLR--RKCRLVTG-- 461 (586)
T ss_pred ccccccccHHHHHHhhcccCCccccChhH-HHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH--CCCeEeeC--
Confidence 100 01233444444 559999999997753 5789999999999999999998 79888864
Q ss_pred CCCCceEEEEecC--CChHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCC----CCHHHH
Q psy8850 288 NRIPHNLNISFNF--IEGESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRF----TTEKEI 359 (397)
Q Consensus 288 ~~~~~~~~~~~~~--~~~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~----~~~~~i 359 (397)
.+..+++.+.+.. .+.......|. +|.+..-.... .......+.|||+.... ..++|+
T Consensus 462 gTdnHlvLvDl~~~g~~G~~ae~~Le~~~I~~Nkn~iP~--------------d~~~~~psGiRiGT~alT~rG~~e~d~ 527 (586)
T PLN02271 462 GTDNHLLLWDLTTLGLTGKNYEKVCEMCHITLNKTAIFG--------------DNGTISPGGVRIGTPAMTSRGCLESDF 527 (586)
T ss_pred CCCcceeeecCcccCCCHHHHHHHHHHcCeEeccccCCC--------------CCCCCCCCcccccCHHHHhcCCCcHHH
Confidence 2336777777753 35666666665 66665332111 11222347899986544 458999
Q ss_pred HHHHHHHHHHHHH
Q psy8850 360 DFTIKLLKMKVKK 372 (397)
Q Consensus 360 ~~~~~~l~~~~~~ 372 (397)
+++.+.|.+++..
T Consensus 528 ~~iA~~i~~~~~~ 540 (586)
T PLN02271 528 ETIADFLLRAAQI 540 (586)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999998873
No 168
>PLN02672 methionine S-methyltransferase
Probab=99.95 E-value=1.4e-25 Score=225.93 Aligned_cols=315 Identities=12% Similarity=0.056 Sum_probs=222.4
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCC---cEEEeCChhHHHHHHHHHhHhhhc
Q psy8850 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPR---EIIWTSGATESNNLAIKGAAHFYK 83 (397)
Q Consensus 7 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~---~i~~~~g~t~a~~~~l~~l~~~~~ 83 (397)
.++|+.+++++.+.+... .+. +...+....+++++++.+|++.+ +|++++|+++++..++.++.
T Consensus 709 ~ppPp~V~eAi~eal~~~-------~~s--~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL~lll~aLl---- 775 (1082)
T PLN02672 709 LPVPSAVKASIFESFVRQ-------NIS--ESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLALFNKLVLCCV---- 775 (1082)
T ss_pred CCCCHHHHHHHHHHHhhc-------CCC--CCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHHHHHHHHHHc----
Confidence 367899999998877541 111 11234568899999999998654 79999999999999999888
Q ss_pred cCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCC--CCCCCHHHHHHHhcC-CceEEEEeccc-Cccccccc---HH
Q psy8850 84 KRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN--NGLITLSQLEEKICS-DTILVSVMLVN-NEIGVIQP---IL 156 (397)
Q Consensus 84 ~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~~-~~~~v~~~~~~-~~tG~~~~---l~ 156 (397)
++||+|+++.|+|+.+...++.. |.+++.+|+++ ++.+|++++++++++ +.+++++++|+ ||||.+++ ++
T Consensus 776 ~pGD~VLVp~PtY~~Y~~~a~~~---Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~~~~~I~L~nPnhNPTG~v~S~eeLe 852 (1082)
T PLN02672 776 QEGGTLCFPAGSNGTYVSAAKFL---KANFRRIPTKSSDGFKLTAKTLASTLETVKKPWVYISGPTINPTGLLYSNSEIE 852 (1082)
T ss_pred CCCCEEEEeCCChHHHHHHHHHc---CCEEEEEecccccCCCCCHHHHHHHhccCCCCEEEEECcCCCCcCccCCHHHHH
Confidence 89999999999999999998887 99999999963 467889999999976 45688888886 99999998 56
Q ss_pred HHHHHHHhcCcEEEEecccccCcc---c---cccC----cc------cccEEEeccccccCCCC--ceEEEEecC-CCCc
Q psy8850 157 EIGELCRSKGVIFHCDAAQAVGKI---D---INIQ----NY------KVDLMSFSAHKIYGPKG--IGALYIRRN-PRTR 217 (397)
Q Consensus 157 ~i~~l~~~~gi~livD~a~~~~~~---~---~~~~----~~------~~d~~~~s~~K~~g~~g--~g~~~~~~~-~~~~ 217 (397)
+|+++|++||++||+|++|+.-.. + .++. .. ...+++.|++|.++.+| +|+++++++ ....
T Consensus 853 ~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylIap~~eLi~~ 932 (1082)
T PLN02672 853 EILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLALNDSVLIDA 932 (1082)
T ss_pred HHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHheeEEeCCHHHHHH
Confidence 788889999999999999971111 1 0110 01 13467889999555445 799988644 4444
Q ss_pred cccccccCCccccccCCCCchhHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCC
Q psy8850 218 IEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRL-------ARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRI 290 (397)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~-------~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~ 290 (397)
+.... . ...+......+..+++.. +.+.+.+.++.++++++++.+.|++ . ++.+..+.+
T Consensus 933 l~~~~-~--------~s~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~-~-Gi~v~~PeG--- 998 (1082)
T PLN02672 933 FHSAP-G--------LSRPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETLEA-C-GWDVLEPQG--- 998 (1082)
T ss_pred HHHhh-h--------hcCCCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHH-C-CCeEecCCc---
Confidence 43321 0 011111122222233321 2335667788899999999999998 4 666665433
Q ss_pred CceEEEEec------------------CCChHHHHHHhC---CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEe
Q psy8850 291 PHNLNISFN------------------FIEGESLLMAIK---DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFT 349 (397)
Q Consensus 291 ~~~~~~~~~------------------~~~~~~~~~~l~---~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~ 349 (397)
+.++++.++ +.++.++.+.|. ||.+.+|..|.. .+++||+
T Consensus 999 GFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~-------------------~g~~RIs 1059 (1082)
T PLN02672 999 GISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGI-------------------PGYCRFS 1059 (1082)
T ss_pred EEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCC-------------------CCeEEEE
Confidence 334444321 134567777764 899999864432 3799999
Q ss_pred eCCCCCHHHHHHHHHHHHHHHHH
Q psy8850 350 IGRFTTEKEIDFTIKLLKMKVKK 372 (397)
Q Consensus 350 ~~~~~~~~~i~~~~~~l~~~~~~ 372 (397)
++. +++++++++++|+++.+.
T Consensus 1060 fa~--~~e~LeeALerL~kf~~~ 1080 (1082)
T PLN02672 1060 FAL--EDSEFDRALKAIARFKEL 1080 (1082)
T ss_pred ecC--CHHHHHHHHHHHHHHHHh
Confidence 985 789999999999986653
No 169
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.95 E-value=3.9e-26 Score=214.08 Aligned_cols=309 Identities=15% Similarity=0.168 Sum_probs=213.3
Q ss_pred hhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHH-HhhCCcEE
Q psy8850 35 YGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRK-LENDGFRV 113 (397)
Q Consensus 35 ~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~-~~~~g~~v 113 (397)
+++...+...++++.|+++.+.+ ++++++||+.|+..++.++. ++||+|+++.+.|+++...... +...|+++
T Consensus 58 Y~r~~~p~~~~Le~~iA~~~g~~--~~l~~~sG~~Ai~~al~~ll----~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v 131 (400)
T PRK06234 58 YSRLGNPTSTEVENKLALLEGGE--AAVVAASGMGAISSSLWSAL----KAGDHVVASDTLYGCTFALLNHGLTRYGVEV 131 (400)
T ss_pred ccCCCCccHHHHHHHHHHHhCCC--cEEEEcCHHHHHHHHHHHHh----CCCCEEEEecCccchHHHHHHHHHhhCCeEE
Confidence 34344567889999999999975 57889999999999888887 7999999999999988776644 33349999
Q ss_pred EEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhc--CcEEEEecccccCccccccCcccccE
Q psy8850 114 TYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSK--GVIFHCDAAQAVGKIDINIQNYKVDL 191 (397)
Q Consensus 114 ~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~--gi~livD~a~~~~~~~~~~~~~~~d~ 191 (397)
+.++.+ |++++++++++++++|++++|+||+|.+.|+++|.++|+++ |+++++|++|+.+.....+ ..++|+
T Consensus 132 ~~vd~~-----d~e~l~~~i~~~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livDea~~~~~~~~~l-~~g~Di 205 (400)
T PRK06234 132 TFVDTS-----NLEEVRNALKANTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVDNTFCTPYIQRPL-QLGADV 205 (400)
T ss_pred EEECCC-----CHHHHHHHhccCCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEECCCCchhcCCch-hhCCcE
Confidence 999865 79999999999999999999999999999999999999997 9999999999866543222 347899
Q ss_pred EEeccccccCCCC---ceEEEEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8850 192 MSFSAHKIYGPKG---IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKR 268 (397)
Q Consensus 192 ~~~s~~K~~g~~g---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~ 268 (397)
++.|++|.+++.| .|+++++++..+.+...... .......+....+.....++ .++.+.++..+++.+
T Consensus 206 vv~S~sK~l~g~g~~~gG~v~~~~~~~~~l~~~~~~-----~~~g~~l~p~~a~l~~~~l~----tl~~r~~~~~~na~~ 276 (400)
T PRK06234 206 VVHSATKYLNGHGDVIAGFVVGKEEFINQVKLFGIK-----DMTGSVIGPFEAFLIIRGMK----TLQIRMEKHCKNAMK 276 (400)
T ss_pred EEeeccccccCCCCceeEEEEecHHHHHHHHHHHHH-----HhcCCCCCHHHHHHHHhccC----cHHHHHHHHHHHHHH
Confidence 9999999554434 58888887654444321100 00011222222222223333 234566667788888
Q ss_pred HHHHHhhhcCcEEEeCCCC--------------CCCCceEEEEecCC--ChHHHHHHhC--CcEecccCccCCC----CC
Q psy8850 269 LYNGLMESIEEIYINGDMN--------------NRIPHNLNISFNFI--EGESLLMAIK--DIAVSSGSACTSA----SL 326 (397)
Q Consensus 269 l~~~l~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~--~~~~~~~~l~--~i~~~~g~~~~~~----~~ 326 (397)
+.+.|++ .+.+..+..+. ...++++.|.+++. ...++.+.|+ .+...-|...+.. .+
T Consensus 277 ~a~~L~~-~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~ 355 (400)
T PRK06234 277 VAKFLES-HPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGGVEEGKVVMNNVKLATLAVSLGDAETLIQHPASM 355 (400)
T ss_pred HHHHHHc-CCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecCcHHHHHHHHHhCCcceEeccCCCCCceecCCccC
Confidence 8888887 67654332221 13467888888642 1346666776 5555556544332 11
Q ss_pred Ch----hhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHH
Q psy8850 327 EP----SYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 327 ~~----~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 373 (397)
.+ ....+..|+.+ +.||+|++. |+.+.+++.|.++++.+
T Consensus 356 ~~~~~~~~~~~~~gi~~----~l~R~svGl----E~~~dl~~dl~~al~~~ 398 (400)
T PRK06234 356 THSPYTAEERKEAGISD----GLVRLSVGL----EDVDDIIADLKQALDLI 398 (400)
T ss_pred CCCCCCHHHHHhcCCCC----CeEEEEeCC----CCHHHHHHHHHHHHHHH
Confidence 11 12233556554 899999997 56666666666666543
No 170
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.95 E-value=1.8e-25 Score=211.39 Aligned_cols=321 Identities=18% Similarity=0.134 Sum_probs=220.4
Q ss_pred CCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCE
Q psy8850 9 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKH 88 (397)
Q Consensus 9 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~ 88 (397)
.+|+|++++.+++..+...... ........+...++++.+++++|.+ ..++.+||++|+..++..+... .+++.
T Consensus 60 ~~p~v~~a~~~~~~~~~~~~~~--s~~~~~~~~~~~~le~~la~~~g~~--~~~~~~SG~~An~~ai~~l~~~--~~g~~ 133 (406)
T PRK13393 60 QHPAVLAAMHEALDTCGAGAGG--TRNISGTNHYHVLLEAELADLHGKE--AALLFTSGYVSNWAALSTLGSR--LPGCV 133 (406)
T ss_pred CCHHHHHHHHHHHHHcCCCCcc--cccccCChHHHHHHHHHHHHHhCCC--cEEEeCCcHHHHHHHHHHhhcC--CCCCE
Confidence 4799999999999874322211 1111122346788999999999964 5666667778999999877631 26788
Q ss_pred EEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhc----CCceEEEEecccCcccccccHHHHHHHHHh
Q psy8850 89 IITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKIC----SDTILVSVMLVNNEIGVIQPILEIGELCRS 164 (397)
Q Consensus 89 vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~----~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~ 164 (397)
|+.....|+++..++... |.++..++.+ |++++++.+. +++++|++++++|++|.+.|+++|.++|++
T Consensus 134 I~~~~~~H~s~~~~~~~~---g~~~~~~~~~-----d~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~~l~~i~~l~~~ 205 (406)
T PRK13393 134 ILSDELNHASMIEGIRHS---RAEKRIFRHN-----DPADLERKLSDLDPHRPKLVAFESVYSMDGDIAPIAEICDVAEK 205 (406)
T ss_pred EEEccchhHHHHHHHHHc---CCeEEEeCCC-----CHHHHHHHHHhccCCCCEEEEEcCCCCCCCchhCHHHHHHHHHH
Confidence 888889999988887654 7777777643 6777877764 367899999999999999999999999999
Q ss_pred cCcEEEEecccccCcc-cc-----ccCc--ccccEEEeccccccCCCCceEEEEecCCCCccccccccCCcccccc-CCC
Q psy8850 165 KGVIFHCDAAQAVGKI-DI-----NIQN--YKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLR-SGT 235 (397)
Q Consensus 165 ~gi~livD~a~~~~~~-~~-----~~~~--~~~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 235 (397)
+|+++++|++|+.|.. +. .... ..+|+++.|++|.+|..| |+++.+++....+..... .+. .++
T Consensus 206 ~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~~G-G~~~~~~~~~~~l~~~~~------~~~~t~~ 278 (406)
T PRK13393 206 HGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGVMG-GYITGSAALCDFIRSFAS------GFIFTTS 278 (406)
T ss_pred cCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhcccC-ceeeCCHHHHHHHHHhCc------CceecCc
Confidence 9999999999985542 11 1111 136888899999777665 888776654444332211 111 234
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecC-CChHHHHHHhC---
Q psy8850 236 LATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF-IEGESLLMAIK--- 311 (397)
Q Consensus 236 ~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~--- 311 (397)
.+....++..++++.+.+.. ...+++.++++++++.|++ + ++.+.... +.++.+.+.+ ....++...|.
T Consensus 279 ~~p~~~aa~~aaL~~~~~~~-~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~----~~i~~v~~~~~~~~~~l~~~L~~~~ 351 (406)
T PRK13393 279 LPPAVAAGALASVRHLKASS-AERERHQDRVARLRARLDK-A-GIPHLPNP----SHIVPVMVGDPVLCKQISDELLDRY 351 (406)
T ss_pred cCHHHHHHHHHHHHHHhhCH-HHHHHHHHHHHHHHHHHHH-c-CCCcCCCC----CCeEEEEeCCHHHHHHHHHHHHHhC
Confidence 45555666668888775432 2346677889999999987 3 55444322 3344454432 12356666553
Q ss_pred CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHH
Q psy8850 312 DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 312 ~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 373 (397)
|+.+.+..... .+.+.+.|||+++.+++++|+|+++++|++++.++
T Consensus 352 Gi~v~~~~~p~----------------~p~g~~~iRis~~~~~t~edid~l~~~l~~~~~~~ 397 (406)
T PRK13393 352 GIYVQPINYPT----------------VPRGTERLRITPSPLHTDADIEHLVQALSEIWARL 397 (406)
T ss_pred CEEEEeECCCC----------------CCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhc
Confidence 78877642211 01123679999999999999999999999987654
No 171
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.95 E-value=3.3e-26 Score=211.19 Aligned_cols=312 Identities=15% Similarity=0.120 Sum_probs=217.8
Q ss_pred cchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHH-HhhCCc
Q psy8850 33 HIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRK-LENDGF 111 (397)
Q Consensus 33 ~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~-~~~~g~ 111 (397)
+.+++...+....+++.++++-|.+ ..++++||+.|+.+++.++. ++||+|+++...|.++...+.. +.+.|+
T Consensus 54 ~~YsR~~nPt~~~le~~la~LEg~~--~a~~~~SGmaAi~~~~~~ll----~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi 127 (395)
T PRK08114 54 LFYGRRGTLTHFSLQEAMCELEGGA--GCALYPCGAAAVANAILAFV----EQGDHVLMTGTAYEPTQDFCSKILSKLGV 127 (395)
T ss_pred ccccCCCChhHHHHHHHHHHHhCCC--eEEEEhHHHHHHHHHHHHHc----CCCCEEEEeCCCcHHHHHHHHHHHHhcCc
Confidence 4556666778899999999998876 67888889999999998887 7999999999999998888754 455699
Q ss_pred EEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcC--cEEEEecccccCccccccCcccc
Q psy8850 112 RVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKG--VIFHCDAAQAVGKIDINIQNYKV 189 (397)
Q Consensus 112 ~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~g--i~livD~a~~~~~~~~~~~~~~~ 189 (397)
++..++.. |.++++++++++|++|++++++||+|.+.|+++|+++||++| +++++|++++.+.. .+...+++
T Consensus 128 ~v~~vd~~-----d~~~l~~~l~~~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~-~~pl~~Ga 201 (395)
T PRK08114 128 TTTWFDPL-----IGADIAKLIQPNTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMIDNTWAAGVL-FKALDFGI 201 (395)
T ss_pred EEEEECCC-----CHHHHHHhcCCCceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEEECCCccccc-cCHHHcCC
Confidence 99998853 789999999999999999999999999999999999999984 99999999998876 77788899
Q ss_pred cEEEecccc-ccCCC--CceEEEEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8850 190 DLMSFSAHK-IYGPK--GIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQ 266 (397)
Q Consensus 190 d~~~~s~~K-~~g~~--g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~ 266 (397)
|+++.|.|| ++|+. +.|+++.+++..+.+..... ......+....+.+...++ .+.-+.++..+++
T Consensus 202 Divv~S~tKyl~Ghsdv~~G~v~~~~~~~~~l~~~~~-------~~G~~~~p~~a~l~~rgl~----TL~lR~~~~~~na 270 (395)
T PRK08114 202 DISIQAGTKYLVGHSDAMIGTAVANARCWEQLRENSY-------LMGQMVDADTAYMTSRGLR----TLGVRLRQHEESS 270 (395)
T ss_pred cEEEEcCcccccCCCcceeEEEEcCHHHHHHHHHHHH-------hccCCCCHHHHHHHHcCCC----cHHHHHHHHHHHH
Confidence 999999999 66664 46777666543222221111 1111222222222222222 2455778888899
Q ss_pred HHHHHHHhhhcCcEEEeCCCC--------------CCCCceEEEEecCC-C---hHHHHHHhC--CcEecccCccCCCCC
Q psy8850 267 KRLYNGLMESIEEIYINGDMN--------------NRIPHNLNISFNFI-E---GESLLMAIK--DIAVSSGSACTSASL 326 (397)
Q Consensus 267 ~~l~~~l~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~-~---~~~~~~~l~--~i~~~~g~~~~~~~~ 326 (397)
..+.+.|++ .|.+..+.-|. ...++++.|.+++. + ...+.+.|+ .+...-|...+....
T Consensus 271 ~~va~~L~~-hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~~f~~~l~l~~~a~SlGg~~SLi~~ 349 (395)
T PRK08114 271 LKVAEWLAE-HPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLKKKLTDEQLANYLDNFSLFSMAYSWGGFESLILA 349 (395)
T ss_pred HHHHHHHHc-CCCEeEEECCCCCCCccHHHHHhhCCCCceEEEEEecCcccHHHHHHHHHhCCcceeecccCCccceecc
Confidence 999999998 77664332221 23467888888642 2 234555555 445555554443221
Q ss_pred ChhhHHHhhCCC--ccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHH
Q psy8850 327 EPSYVLRALGCN--DELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKK 372 (397)
Q Consensus 327 ~~~~~~~~~g~~--~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 372 (397)
............ ....++.||+|++. |++|.+++.|.+++++
T Consensus 350 ~~~~~~~~~~~~~~~~~~~~liRlSvGl----Ed~~DLi~Dl~~Al~~ 393 (395)
T PRK08114 350 NQPEEIAAIRPAGEVDFTGTLIRLHIGL----EDVDDLIADLAAGFAR 393 (395)
T ss_pred CCchhhhccCChhHhcCCCCeEEEEecc----CCHHHHHHHHHHHHHh
Confidence 001111111100 11234899999996 6777777777777764
No 172
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.95 E-value=8.9e-26 Score=213.99 Aligned_cols=334 Identities=17% Similarity=0.134 Sum_probs=228.2
Q ss_pred HHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEE
Q psy8850 12 RVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIIT 91 (397)
Q Consensus 12 ~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~ 91 (397)
.+.+++.+++.. ++ . . |.......++++.++++++.+ ++++|+||++|+.+++.+++ ++|| |++
T Consensus 58 a~~~a~~~a~~~--g~--~-~----Y~~~~g~~~Lreaia~~~~~~--~vv~t~ggt~A~~~~~~all----~pGD-Vii 121 (460)
T PRK13238 58 AMSDRQWAAMMR--GD--E-A----YAGSRSYYRLEDAVKDIFGYP--YTIPTHQGRAAEQILFPVLI----KKGD-VVP 121 (460)
T ss_pred hhhHHHHHHHHh--CC--c-c----cCCCCCHHHHHHHHHHHhCCC--cEEECCCHHHHHHHHHHHhC----CCCC-EEc
Confidence 466666666642 11 1 1 222346788999999999976 79999999999999999887 8999 999
Q ss_pred cCCCChhhHHHHHHHhhCCcEEEEeccCC----------CCCCCHHHHHHHhcC----CceEEEEecccCccc-cccc--
Q psy8850 92 VQTEHKSVLDSIRKLENDGFRVTYLKPKN----------NGLITLSQLEEKICS----DTILVSVMLVNNEIG-VIQP-- 154 (397)
Q Consensus 92 ~~~~~~s~~~~~~~~~~~g~~v~~v~~~~----------~~~~d~~~l~~~i~~----~~~~v~~~~~~~~tG-~~~~-- 154 (397)
+++.|.++...+... |.+++.++++. .|.+|+++|++++++ ++++|++++++||+| .+++
T Consensus 122 ~~p~~~~~~~~i~~~---G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~ 198 (460)
T PRK13238 122 SNYHFDTTRAHIELN---GATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVGAENVPFIVMTITNNSAGGQPVSMA 198 (460)
T ss_pred cCCcccchHHHHHHc---CCEEEEEeccccccccccccccCCcCHHHHHHHHhhcCCCceeEEEEecCCCCCCCcCCCHH
Confidence 999888888777766 99999998853 245999999999984 799999999999997 7776
Q ss_pred -HHHHHHHHHhcCcEEEEecccccCc-----------cccccC------cccccEEEecccc-ccCCCCceEEEEec-CC
Q psy8850 155 -ILEIGELCRSKGVIFHCDAAQAVGK-----------IDINIQ------NYKVDLMSFSAHK-IYGPKGIGALYIRR-NP 214 (397)
Q Consensus 155 -l~~i~~l~~~~gi~livD~a~~~~~-----------~~~~~~------~~~~d~~~~s~~K-~~g~~g~g~~~~~~-~~ 214 (397)
+++|.++|++||++||+|+++.... ...++. ....|++++|++| .+++.| |+++.++ ++
T Consensus 199 ~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~~~G-G~i~~~d~~l 277 (460)
T PRK13238 199 NLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAMVNIG-GLLCFRDEDL 277 (460)
T ss_pred HHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcEEEEecccCCCCcce-eEEEcChHHH
Confidence 5789999999999999999875321 111111 1147999999999 677775 8888874 44
Q ss_pred CCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceE
Q psy8850 215 RTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNL 294 (397)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 294 (397)
...++...... ......+.++...+.++..+++...+ +.+.+...+++++|.+.|.+ .|+.+..+.+ ++.+
T Consensus 278 ~~~~~~~~~~~--~g~~t~~g~~~~~~~Ala~~l~e~~~--~~~~~~~~~~~~~l~~~L~~--~G~~~~~p~G---g~~v 348 (460)
T PRK13238 278 FTECRTLCILY--EGFPTYGGLAGRDMEALAVGLYEGMD--EDYLAYRIGQVEYLGEGLEE--AGVPIQTPAG---GHAV 348 (460)
T ss_pred HHHhhhccccc--CCcccccCcHHHHHHHHHhhHHHhhC--hHHHHHHHHHHHHHHHHHHH--CCCCeEccCC---ceEE
Confidence 44444332111 01123455555656677666664332 22333334467999999988 5888887655 3455
Q ss_pred EEEecCC---------ChHHHHHHhC---CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCC-CCCHHHHHH
Q psy8850 295 NISFNFI---------EGESLLMAIK---DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGR-FTTEKEIDF 361 (397)
Q Consensus 295 ~~~~~~~---------~~~~~~~~l~---~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~-~~~~~~i~~ 361 (397)
.+.+... ++.++...|. ||.+.++..|..+...+ .|.........+|+++.- .-+.+.+|.
T Consensus 349 ~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~------~~~~~~~~~~~~Rla~~rr~~~~~~~~~ 422 (460)
T PRK13238 349 FVDAGKFLPHIPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDPK------TGEQLPAPAELLRLAIPRRVYTQSHMDY 422 (460)
T ss_pred EEEchhcCCCCCCCCCchHHHHHHHHHHcCeeeecccceecccCCC------CccccCCccceEEEecccccCCHHHHHH
Confidence 5554422 3456666664 89888876554422110 010011124889999883 348999999
Q ss_pred HHHHHHHHHHHHHhcCccch
Q psy8850 362 TIKLLKMKVKKLRELSPLWD 381 (397)
Q Consensus 362 ~~~~l~~~~~~~~~~~~~~~ 381 (397)
++++|.++. +.++.-+++.
T Consensus 423 ~~~~l~~~~-~~~~~~~~~~ 441 (460)
T PRK13238 423 VAEALKAVK-ENRESIKGLR 441 (460)
T ss_pred HHHHHHHHH-HhHhhcCCeE
Confidence 999999876 4444444553
No 173
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.95 E-value=6.9e-26 Score=209.99 Aligned_cols=307 Identities=16% Similarity=0.118 Sum_probs=213.3
Q ss_pred cchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHH-HhhCCc
Q psy8850 33 HIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRK-LENDGF 111 (397)
Q Consensus 33 ~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~-~~~~g~ 111 (397)
+.+++...+....+++.++++.|.+ ++++++||++|+..++.++. ++||+|+++++.|+++...+.. +...|+
T Consensus 42 ~~Y~r~gnPt~~~lE~~lA~l~g~~--~~~~~~sG~~Ai~~al~all----~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi 115 (377)
T TIGR01324 42 LTYGRRGTLTHFALQDAMCELEGGA--GCYLYPSGLAAVTNSILAFV----KAGDHVLMVDSAYEPTRYFCDIVLKRMGV 115 (377)
T ss_pred CcccCCCCccHHHHHHHHHHHhCCC--cEEEECcHHHHHHHHHHHhc----CCCCEEEEcCCCcHHHHHHHHHHHHhcCc
Confidence 3444455567889999999999976 78899999999999999887 8999999999999887665433 344588
Q ss_pred EEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCccccccCcccccE
Q psy8850 112 RVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDL 191 (397)
Q Consensus 112 ~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~ 191 (397)
++..++.+ +.+++++++++++++|++++++||+|.+.|+++|+++|+++|+++++|++|+.|... ....+++|+
T Consensus 116 ~v~~~d~~-----~~e~l~~~i~~~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD~t~a~g~~~-~pl~~gaDi 189 (377)
T TIGR01324 116 DITYYDPL-----IGEDIATLIQPNTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMIDNTWAAGLLF-KPLEHGVDI 189 (377)
T ss_pred EEEEECCC-----CHHHHHHhcCCCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcccccc-CccccCceE
Confidence 88877643 237899999999999999999999999999999999999999999999999988753 233568999
Q ss_pred EEecccc-ccCCCC--ceEEEEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8850 192 MSFSAHK-IYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKR 268 (397)
Q Consensus 192 ~~~s~~K-~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~ 268 (397)
++.|++| +.|..+ .|+++.+++..+.+..... ......+....+.+...++ .+..+.++..+++..
T Consensus 190 vv~S~tK~l~G~~d~~gG~v~~~~~~~~~l~~~~~-------~~G~~l~p~~a~~~~rgl~----tl~~R~~~~~~~a~~ 258 (377)
T TIGR01324 190 SIQAGTKYLVGHSDIMIGTVVANARTWDQLREHSY-------LMGQMVDADDAYTTLRGLR----TLGVRLKQHQESSLA 258 (377)
T ss_pred EEecCceeccCCCCceEEEEEeCHHHHHHHHHHHH-------HhCCCCCHHHHHHHHhhhh----hHHHHHHHHHHHHHH
Confidence 9999999 555433 5777777654443332111 1112233333333333444 334456777777778
Q ss_pred HHHHHhhhcCcEE-EeCCC-------------CCCCCceEEEEecCCC---hHHHHHHhC--CcEecccCccCCCC----
Q psy8850 269 LYNGLMESIEEIY-INGDM-------------NNRIPHNLNISFNFIE---GESLLMAIK--DIAVSSGSACTSAS---- 325 (397)
Q Consensus 269 l~~~l~~~~~~~~-~~~~~-------------~~~~~~~~~~~~~~~~---~~~~~~~l~--~i~~~~g~~~~~~~---- 325 (397)
+.+.|++ .|.+. ++.+. ....++++.|.+++.+ ..++.+.|+ ++...-|...+...
T Consensus 259 la~~L~~-~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~l~~~~~~~slG~~~sl~~~~~~ 337 (377)
T TIGR01324 259 IAKWLSE-QPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRLTQKQVHAFLDHLQLFGLGYSWGGYESLALCNQP 337 (377)
T ss_pred HHHHHHh-CCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHHHhCCcceEeccCCCccceeecCCC
Confidence 8888887 66553 22221 1134678888887422 356667776 56666665544322
Q ss_pred -CChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHH
Q psy8850 326 -LEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKK 372 (397)
Q Consensus 326 -~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 372 (397)
+.+.. ....|+. ++.||+|++. |+.|.+++.|.++++.
T Consensus 338 ~~~~~~-~~~~~~~----~~liR~svGl----E~~~dl~~dl~~al~~ 376 (377)
T TIGR01324 338 ELGHRP-NIKRNLE----GPLIRVHIGL----ENVDDLKADLKAGFEA 376 (377)
T ss_pred CCCHHH-HHhccCC----CCEEEEEeCC----CCHHHHHHHHHHHHhc
Confidence 22211 2233333 3799999997 5677777777776653
No 174
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.95 E-value=5.6e-26 Score=211.45 Aligned_cols=310 Identities=14% Similarity=0.095 Sum_probs=214.1
Q ss_pred cchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHHhhC-Cc
Q psy8850 33 HIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLEND-GF 111 (397)
Q Consensus 33 ~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~-g~ 111 (397)
+.+++...+....+++.|+++.|.+ .+++++||++|+.+++.++. ++||+|+++++.|+++...+..+... |.
T Consensus 44 ~~Y~R~~~pt~~~L~~~lA~l~g~~--~~i~~~sg~~Ai~~~l~~l~----~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi 117 (386)
T PRK08045 44 HDYSRRGNPTRDVVQRALAELEGGA--GAVLTNTGMSAIHLVTTVFL----KPGDLLVAPHDCYGGSYRLFDSLAKRGCY 117 (386)
T ss_pred ceeeCCCCccHHHHHHHHHHHhCCC--eEEEECCHHHHHHHHHHHHc----CCCCEEEEcCCCcHHHHHHHHHHHhhCCe
Confidence 4455556677889999999999964 69999999999999999887 79999999999999877766655433 55
Q ss_pred EEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCccccccCcccccE
Q psy8850 112 RVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDL 191 (397)
Q Consensus 112 ~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~ 191 (397)
++..++. .|++++++++++++++|++++|+||||.+.|+++|.++|+++|+++++|++|..+..... ..+++|+
T Consensus 118 ~v~~vd~-----~d~e~l~~~l~~~tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivDeay~~~~~~~p-l~~gaDi 191 (386)
T PRK08045 118 RVLFVDQ-----GDEQALRAALAEKPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTFLSPALQNP-LALGADL 191 (386)
T ss_pred EEEEeCC-----CCHHHHHHhcccCCeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccCCc-hhhCCCE
Confidence 7776642 589999999999999999999999999999999999999999999999999987654322 2457899
Q ss_pred EEecccc-ccCCCC--ceEEEEecC-CCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8850 192 MSFSAHK-IYGPKG--IGALYIRRN-PRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQK 267 (397)
Q Consensus 192 ~~~s~~K-~~g~~g--~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~ 267 (397)
++.|++| +.|+.+ .|+++.+++ ..+.+..... ....+.+....+.+..+++ .+..++++..+++.
T Consensus 192 vv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~~~-------~~g~~~~p~~~~l~~rgl~----tl~~R~~~~~~na~ 260 (386)
T PRK08045 192 VLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWAN-------NIGVTGGAFDSYLLLRGLR----TLVPRMELAQRNAQ 260 (386)
T ss_pred EEeecceeccCCCCceeEEEEeCcHHHHHHHHHHHH-------hcCCCCCHHHHHHHHhhhc----cHHHHHHHHHHHHH
Confidence 9999999 556554 577766432 2222221110 1111233333333333443 35667788888899
Q ss_pred HHHHHHhhhcCcEEEeCCCC--------------CCCCceEEEEecCC-C-hHHHHHHhC--CcEecccCccCC----CC
Q psy8850 268 RLYNGLMESIEEIYINGDMN--------------NRIPHNLNISFNFI-E-GESLLMAIK--DIAVSSGSACTS----AS 325 (397)
Q Consensus 268 ~l~~~l~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~-~-~~~~~~~l~--~i~~~~g~~~~~----~~ 325 (397)
.+.+.|++ .|.+..+.-|. ...++++.|.+++. + ..++.+.|+ .+...-|...+. ..
T Consensus 261 ~la~~L~~-~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~ 339 (386)
T PRK08045 261 AIVKYLQT-QPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTLRRFLGGLSLFTLAESLGGVESLISHAAT 339 (386)
T ss_pred HHHHHHHc-CCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEecCcHHHHHHHHHhccceeEeccCCCCceeEeCCCC
Confidence 99999988 77664332111 13467888888641 1 245666665 344444543322 11
Q ss_pred CCh----hhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHHH
Q psy8850 326 LEP----SYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKLR 374 (397)
Q Consensus 326 ~~~----~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 374 (397)
+.+ ....+..|+.+ +.||+|++. |+.|.+++.|.++++...
T Consensus 340 ~~~~~~~~~~~~~~gi~~----~liR~svGl----E~~~dl~~dl~~al~~~~ 384 (386)
T PRK08045 340 MTHAGMAPEARAAAGISE----TLLRISTGI----EDGEDLIADLENGFRAAN 384 (386)
T ss_pred cccccCCHHHHHhcCCCC----CeEEEEeCc----CCHHHHHHHHHHHHHHhh
Confidence 111 12223556554 899999997 567777777777776543
No 175
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.95 E-value=3.5e-26 Score=213.36 Aligned_cols=302 Identities=17% Similarity=0.178 Sum_probs=205.8
Q ss_pred hhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHH-HhhCCcEEE
Q psy8850 36 GWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRK-LENDGFRVT 114 (397)
Q Consensus 36 ~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~-~~~~g~~v~ 114 (397)
++...+...++++.+++++|.+ .+++++||+.|+.+++.++. ++||+|+++.+.|+++...+.. +...|.+++
T Consensus 49 ~r~~~p~~~~le~~la~l~g~~--~~~~~~sG~~Ai~~al~al~----~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~ 122 (380)
T TIGR01325 49 SRYANPTVAAFEERIAALEGAE--RAVATATGMSAIQAALMTLL----QAGDHVVASRSLFGSTVGFISEILPRFGIEVS 122 (380)
T ss_pred ecCCCchHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHHh----CCCCEEEEecCCcchHHHHHHHHHHHhCCEEE
Confidence 3344566889999999999985 67889999999999998887 7899999999999887665543 344599999
Q ss_pred EeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCccccccCcccccEEEe
Q psy8850 115 YLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSF 194 (397)
Q Consensus 115 ~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~~ 194 (397)
.++.+ |++++++++++++++|++++++||+|.+.|+++|.++|+++|+++|+|++++.+..... ...++|+++.
T Consensus 123 ~v~~~-----d~~~l~~~i~~~tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD~a~~~~~~~~p-l~~g~Divv~ 196 (380)
T TIGR01325 123 FVDPT-----DLNAWEAAVKPNTKLVFVETPSNPLGELVDIAALAELAHAIGALLVVDNVFATPVLQQP-LKLGADVVVY 196 (380)
T ss_pred EECCC-----CHHHHHHhcCCCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCCc-hhhCCCEEEe
Confidence 98865 78999999999999999999999999999999999999999999999999975433222 2447899999
Q ss_pred ccccccCCCC---ceEEEEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8850 195 SAHKIYGPKG---IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYN 271 (397)
Q Consensus 195 s~~K~~g~~g---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~ 271 (397)
|++|++++.| .|+++.+++..+.+....... .+..+....+.+...++ .+..+.++..+++..+.+
T Consensus 197 S~sK~l~g~g~~~gG~vv~~~~~~~~l~~~~~~~-------g~~~~p~~a~~~l~~l~----tl~~r~~~~~~~a~~la~ 265 (380)
T TIGR01325 197 SATKHIDGQGRVMGGVIAGSEELMAEVAVYLRHT-------GPAMSPFNAWVLLKGLE----TLSLRMQKQFDSALAIAE 265 (380)
T ss_pred eccceecCCCCeEEEEEEeCHHHHHHHHHHHHhh-------CCCCCHHHHHHHHhccC----cHHHHHHHHHHHHHHHHH
Confidence 9999554433 377777765544443322110 11222222222222333 344567777888888888
Q ss_pred HHhhhcCcEEEeCCCC--------------CCCCceEEEEecCC-ChHHHHHHhC--CcEecccCccC----CCCCCh--
Q psy8850 272 GLMESIEEIYINGDMN--------------NRIPHNLNISFNFI-EGESLLMAIK--DIAVSSGSACT----SASLEP-- 328 (397)
Q Consensus 272 ~l~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~-~~~~~~~~l~--~i~~~~g~~~~----~~~~~~-- 328 (397)
.|++ .|.+..+.-|. ...++++.|.+++. ...++.+.|+ .+...-|...+ |..+.+
T Consensus 266 ~L~~-~p~v~~V~yp~l~s~~~~~~~~~~~~g~g~~~s~~l~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~ 344 (380)
T TIGR01325 266 WLQA-QPQVQAVYYPGLPDHPQHELARRQQSGGGTVIGFDVADRAAAWKVLDAVELVSITNNLGDAKSTITHPATTTHGR 344 (380)
T ss_pred HHHc-CCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEECCHHHHHHHHHcCCcceEcccCCCCCeeeeCCCccCccc
Confidence 8888 77655332211 13467888888631 1345556665 33444443332 211111
Q ss_pred --hhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHH
Q psy8850 329 --SYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (397)
Q Consensus 329 --~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 369 (397)
....+..|+.+ +.||||++. |+.|.+++.|+++
T Consensus 345 ~~~~~~~~~gi~~----~liR~svGl----E~~~dl~~dl~~a 379 (380)
T TIGR01325 345 MQPEERAAAGIGD----GLVRLSVGL----EDVDDLIADLKRA 379 (380)
T ss_pred CCHHHHHhcCCCC----CeEEEEecc----CCHHHHHHHHHhh
Confidence 11223556554 899999997 5667777776654
No 176
>PRK05968 hypothetical protein; Provisional
Probab=99.95 E-value=3.4e-26 Score=213.74 Aligned_cols=309 Identities=15% Similarity=0.141 Sum_probs=215.7
Q ss_pred cchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHH-HhhCCc
Q psy8850 33 HIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRK-LENDGF 111 (397)
Q Consensus 33 ~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~-~~~~g~ 111 (397)
+.+++...+...++++.+++++|.+ ..++++||+.|+.+++.++. ++||+|+++.+.|+++...+.. +...|+
T Consensus 55 ~~Y~r~~~p~~~~le~~lA~l~g~~--~av~~~sG~~Ai~~al~al~----~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~ 128 (389)
T PRK05968 55 PIYSRGDNPTVRAFEEMLAKLEGAE--DARGFASGMAAISSTVLSFV----EPGDRIVAVRHVYPDAFRLFETILKRMGV 128 (389)
T ss_pred ccccCCCChhHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHHh----CCCCEEEEeCCCchHHHHHHHHHHHHcCc
Confidence 3344444567889999999999987 34555777889998888877 7999999999999988766653 344599
Q ss_pred EEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCccccccCcccccE
Q psy8850 112 RVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDL 191 (397)
Q Consensus 112 ~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~ 191 (397)
+++.++.+ |++++++++ +++++|++++++|+++.+.|+++|.++|+++|+++|+|++++.+..... ...++|+
T Consensus 129 ~v~~vd~~-----d~~~l~~~i-~~tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD~a~a~~~~~~p-~~~g~Di 201 (389)
T PRK05968 129 EVDYVDGR-----DEEAVAKAL-PGAKLLYLESPTSWVFELQDVAALAALAKRHGVVTMIDNSWASPVFQRP-ITLGVDL 201 (389)
T ss_pred eEEEeCCC-----CHHHHHHhc-ccCCEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcchhccCc-hhcCCcE
Confidence 99998754 889999988 6789999999999999999999999999999999999999986643222 2347899
Q ss_pred EEecccc-ccCCCC--ceEEEEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8850 192 MSFSAHK-IYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKR 268 (397)
Q Consensus 192 ~~~s~~K-~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~ 268 (397)
+++|++| +.|+.+ .|+++.+++..+++......+ ..+..+....+.+...++ .+..+.++..+++++
T Consensus 202 vv~S~tK~l~g~~~~~gG~i~~~~~~~~~l~~~~~~~------~g~~~~~~~A~~~l~~L~----tl~~r~~~~~~~a~~ 271 (389)
T PRK05968 202 VIHSASKYLGGHSDTVAGVVAGSKEHIARINAEAYPY------LGAKLSPFEAWLLLRGLR----TLPLRMKAHEASALE 271 (389)
T ss_pred EEeeccccccCCCCeEEEEEEECHHHHHHHHHHHHHh------CCCCCChHHHHHHHcccC----cHHHHHHHHHHHHHH
Confidence 9999999 555543 588877766554444321100 011222222222223333 345667777788999
Q ss_pred HHHHHhhhcCcEEEeCCCC---------CCCCceEEEEec-CCChHHHHHHhC--CcEecccCccC---CCCCC-----h
Q psy8850 269 LYNGLMESIEEIYINGDMN---------NRIPHNLNISFN-FIEGESLLMAIK--DIAVSSGSACT---SASLE-----P 328 (397)
Q Consensus 269 l~~~l~~~~~~~~~~~~~~---------~~~~~~~~~~~~-~~~~~~~~~~l~--~i~~~~g~~~~---~~~~~-----~ 328 (397)
+.+.|++ .|.+..+..+. ...++++.|.++ +.+..++.+.|+ ++.++.|..++ |..+. +
T Consensus 272 la~~L~~-~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~~~~~~~f~~~L~~~~~~~s~G~~~slv~p~~~~~~~~~~ 350 (389)
T PRK05968 272 IARRLKA-HPVVERVCHPALANHPPAGLSGTSGLFSFIFREGIDVRAFADALKLFRLGVSWGGHESLVVPAEVVLQQKAQ 350 (389)
T ss_pred HHHHHHh-CCCccEEECCCCCCChHHhCCCCceEEEEEECCHHHHHHHHHhCCccEEecCCCCCCceeeeCcccccccCC
Confidence 9999998 88876554322 123458888886 334567778887 67778887777 32221 1
Q ss_pred hhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHH
Q psy8850 329 SYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 329 ~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 373 (397)
....+..|+.+ +.||+|++. |+.+.+++.|++++++.
T Consensus 351 ~~~~~~~gi~~----~liR~SvGl----E~~~dl~~dl~~al~~~ 387 (389)
T PRK05968 351 PNSAARFGVSP----RSVRLHVGL----EGTEALWADLEQALAAA 387 (389)
T ss_pred HHHHHhcCCCC----CeEEEEecc----CCHHHHHHHHHHHHHHh
Confidence 23344556554 899999997 45566666666666544
No 177
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.95 E-value=5.7e-25 Score=208.82 Aligned_cols=350 Identities=17% Similarity=0.197 Sum_probs=239.2
Q ss_pred CCCCCCCHHHHHHHHHHHhhcc--CCCCCCCcchhhhHHHHHH-HHHHHHHHHhCCCCCcEEE---eCChhHHHHHHHHH
Q psy8850 4 SATTPIDPRVVDKMIPYLRVQF--GNPASRNHIYGWTAEKAIE-KARNEVAQLIYADPREIIW---TSGATESNNLAIKG 77 (397)
Q Consensus 4 ~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~la~~~~~~~~~i~~---~~g~t~a~~~~l~~ 77 (397)
+|...+++.+++++...+...+ +.|.+ .+..|....+.++ .+++..+++|+...+.+.+ ..||+.|+..++.+
T Consensus 41 asen~~s~~v~~a~~s~~~~ky~~G~~g~-r~~~G~~~~d~lE~~~~~~~~~~f~~~~~~~~~nv~~~SG~~AN~av~~a 119 (475)
T PLN03226 41 ASENFTSRAVMEALGSCLTNKYSEGLPGA-RYYGGNEYIDQIETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFAVYTA 119 (475)
T ss_pred cCCccCCHHHHHHHhhHHhccccCCCCCC-cCcCCChhHHHHHHHHHHHHHHHhCCCcceeEEecCcCchHHHHHHHHHH
Confidence 5666789999999999995434 45655 3444433444444 4677788999987655443 47889999999999
Q ss_pred hHhhhccCCCEEEEcCC---CChhhHHHHHH--HhhCCcEEEE--eccC-CCCCCCHHHHHHHhcC-CceEEEEecccCc
Q psy8850 78 AAHFYKKRGKHIITVQT---EHKSVLDSIRK--LENDGFRVTY--LKPK-NNGLITLSQLEEKICS-DTILVSVMLVNNE 148 (397)
Q Consensus 78 l~~~~~~~g~~vl~~~~---~~~s~~~~~~~--~~~~g~~v~~--v~~~-~~~~~d~~~l~~~i~~-~~~~v~~~~~~~~ 148 (397)
++ ++||+|+..+. .|.++...... +...+..+.. ++.+ +++.+|+++|++++.+ ++++|++. .+.
T Consensus 120 L~----~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~~~g~iD~d~Le~~l~~~~pklIv~~--~S~ 193 (475)
T PLN03226 120 LL----QPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDESTGLIDYDKLEKKAMLFRPKLIIAG--ASA 193 (475)
T ss_pred hC----CCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecCCCCCcCHHHHHHHHhhcCCeEEEEe--cCc
Confidence 98 89999998554 33333221111 0011222222 3334 5788999999998864 77776553 234
Q ss_pred ccccccHHHHHHHHHhcCcEEEEecccccCccccccCc---ccccEEEecccc-ccCCCCceEEEEecCCCCcccc----
Q psy8850 149 IGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQN---YKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEA---- 220 (397)
Q Consensus 149 tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~---~~~d~~~~s~~K-~~g~~g~g~~~~~~~~~~~~~~---- 220 (397)
+|...|+++|.++|+++|+++++|++|+.|....+... .++|++++|+|| +.||.| |+++++++....+.+
T Consensus 194 ~s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p~~~~Div~~t~hK~L~GP~G-g~I~~~~~~~~~~~~g~~~ 272 (475)
T PLN03226 194 YPRDWDYARMRKIADKVGALLMCDMAHISGLVAAQEAASPFEYCDVVTTTTHKSLRGPRG-GMIFFRKGPKPPKGQGEGA 272 (475)
T ss_pred CCCccCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCCCCCCeEEEecCcccccCCCc-eEEEEchhhcccccCCCcc
Confidence 78899999999999999999999999998887544321 268999999999 669998 888888754322110
Q ss_pred ---c--cccCCccccccCCCCchhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceE
Q psy8850 221 ---Q--IHGGGHEYGLRSGTLATHQIVGMGEAFRLARI-EMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNL 294 (397)
Q Consensus 221 ---~--~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 294 (397)
. .........+ .++++...++++.++++++.+ +.+++.+++.++.++|++.|.+ .|+.+...... .+++
T Consensus 273 ~~d~~~~i~~a~~~~~-~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~--~G~~l~~~~t~--~hi~ 347 (475)
T PLN03226 273 VYDYEDKINFAVFPGL-QGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANRLMS--KGYKLVTGGTD--NHLV 347 (475)
T ss_pred HHHHHHHhccccCCcc-CCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHh--CCCEEEcCCCC--CCEE
Confidence 0 0000001112 356888899999999998864 5788899999999999999998 68888864322 4566
Q ss_pred EEEec--CCChHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEe----eCCCCCHHHHHHHHHHH
Q psy8850 295 NISFN--FIEGESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFT----IGRFTTEKEIDFTIKLL 366 (397)
Q Consensus 295 ~~~~~--~~~~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~----~~~~~~~~~i~~~~~~l 366 (397)
.+.+. +.+..++...|. +|.+..+..... ......+.||++ .+...+++|++++.+.|
T Consensus 348 lv~~~~~gi~~~~~~~~L~~~~I~~nk~~~p~~--------------~~~~~~~giRiGt~~lt~~g~~~~d~~~ia~~i 413 (475)
T PLN03226 348 LWDLRPLGLTGSRVEKVLDLAHITLNKNAVPGD--------------SSALVPGGVRIGTPAMTSRGLVEKDFEKVAEFL 413 (475)
T ss_pred EEEccCCCCCHHHHHHHHHHCCCEECCCCCCCC--------------cccCCCCCcccCcHHHHHCCCCHHHHHHHHHHH
Confidence 66663 456667777675 888776532111 112233668884 33446799999999999
Q ss_pred HHHHHHHHhcCccc
Q psy8850 367 KMKVKKLRELSPLW 380 (397)
Q Consensus 367 ~~~~~~~~~~~~~~ 380 (397)
.++++...+...+.
T Consensus 414 ~~~~~~~~~~~~~~ 427 (475)
T PLN03226 414 HRAVTIALKIQKEH 427 (475)
T ss_pred HHHHHHhhhhhhhc
Confidence 99998765544443
No 178
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.95 E-value=4.8e-26 Score=212.66 Aligned_cols=310 Identities=17% Similarity=0.144 Sum_probs=213.2
Q ss_pred cchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHH-hhCCc
Q psy8850 33 HIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKL-ENDGF 111 (397)
Q Consensus 33 ~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~-~~~g~ 111 (397)
|.+++...+...++++.+++++|.+ ..++++||+.|+.+++.++. ++||+|+++.+.|+++...+... ...|+
T Consensus 51 ~~y~r~~~p~~~~le~~lA~l~g~~--~av~~~sG~~Ai~~~l~al~----~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~ 124 (391)
T TIGR01328 51 YIYSRLGNPTVSNLEGRIAFLEGTE--AAVATSSGMGAIAATLLTIL----KAGDHLISDECLYGCTFALLEHALTKFGI 124 (391)
T ss_pred CceeCCCCchHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHHh----CCCCEEEEecCcchHHHHHHHHHHhcCCe
Confidence 4444445567889999999999987 46788888999999998887 79999999999998777666554 33499
Q ss_pred EEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCccccccCcccccE
Q psy8850 112 RVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDL 191 (397)
Q Consensus 112 ~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~ 191 (397)
++..++.+ |++++++++++++++|++++++||+|.+.|+++|.++|+++|+++|+|++++.+...... ..++|+
T Consensus 125 ~~~~vd~~-----d~e~l~~~i~~~tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD~a~a~~~~~~~~-~~g~Di 198 (391)
T TIGR01328 125 QVDFINMA-----IPEEVKAHIKDNTKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVDNTFATPMLTNPV-ALGVDV 198 (391)
T ss_pred EEEEECCC-----CHHHHHHhhccCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCchhccCCch-hcCCCE
Confidence 99999876 799999999999999999999999999999999999999999999999999866543222 348999
Q ss_pred EEeccccccCCCC---ceEEEEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8850 192 MSFSAHKIYGPKG---IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKR 268 (397)
Q Consensus 192 ~~~s~~K~~g~~g---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~ 268 (397)
+++|++|.+|+.| .|+++.+++....+....... ...+.++....+.....++ .+..+.++..+++.+
T Consensus 199 vv~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~~~~-----~~g~~l~~~~a~l~l~~L~----tl~~r~~~~~~na~~ 269 (391)
T TIGR01328 199 VVHSATKYIGGHGDVVAGLICGKAELLQQIRMVGIKD-----MTGSVISPFDAWLILRGLK----TLNIRMKRHSENAMK 269 (391)
T ss_pred EEccccccccCCCCceEEEEEcCHHHHHHHHHHHHHh-----CCCCCCCcHHHHHHHhCcC----cHHHHHHHHHHHHHH
Confidence 9999999655433 477777765544443211100 0011222222222212232 344567778888999
Q ss_pred HHHHHhhhcCcEEEeCCCC--------------CCCCceEEEEecCC--ChHHHHHHhC--CcEecccCccCC----CCC
Q psy8850 269 LYNGLMESIEEIYINGDMN--------------NRIPHNLNISFNFI--EGESLLMAIK--DIAVSSGSACTS----ASL 326 (397)
Q Consensus 269 l~~~l~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~--~~~~~~~~l~--~i~~~~g~~~~~----~~~ 326 (397)
+.+.|++ .|++..+.-|+ ...++++.|.+++. ...++.+.|+ .....-|...+. .++
T Consensus 270 la~~L~~-~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~ 348 (391)
T TIGR01328 270 VAEYLKS-HPAVEKVYYPGFEDHPGHDIAAKQMRMGGGMITFELKGGFAGAKKLLNNLKLIRLAVSLGDAETLIQHPASM 348 (391)
T ss_pred HHHHHHh-CCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEeCCCHHHHHHHHHhCCcceEecCCCCCcccCcCCCcc
Confidence 9999988 77765332221 12366888888631 1345555555 344445544332 222
Q ss_pred Chh----hHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHH
Q psy8850 327 EPS----YVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKK 372 (397)
Q Consensus 327 ~~~----~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 372 (397)
.+. ...+..|+.. +.||+|++. |+.|.+++.|.+++..
T Consensus 349 ~~~~~~~~~~~~~gi~~----~liR~svGl----E~~~dl~~dl~~al~~ 390 (391)
T TIGR01328 349 THAVVPKEEREAAGITD----GMIRLSVGL----EDADDLIADLKQALDA 390 (391)
T ss_pred ccccCCHHHHHhcCCCC----CeEEEEeCc----CCHHHHHHHHHHHHhh
Confidence 111 1223455543 899999997 6788888888877764
No 179
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.95 E-value=1.6e-25 Score=209.50 Aligned_cols=311 Identities=14% Similarity=0.090 Sum_probs=210.8
Q ss_pred cchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHH-hhCCc
Q psy8850 33 HIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKL-ENDGF 111 (397)
Q Consensus 33 ~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~-~~~g~ 111 (397)
+.+++...+...++++.|+++.|.+ ..++++||++|+.+++.++. ++||+|+++.+.|++....+..+ ...|.
T Consensus 52 ~~y~R~~~p~~~~Le~~lA~l~g~~--~~v~~~sG~~Ai~~~l~all----~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~ 125 (405)
T PRK08776 52 YDYTRSGNPTRDLLGEALAELEGGA--GGVITATGMGAINLVLNALL----QPGDTLVVPHDAYGGSWRLFNALAKKGHF 125 (405)
T ss_pred CcccCCCChHHHHHHHHHHHHhCCC--ceEEEcCHHHHHHHHHHHHh----CCCCEEEEccCCchHHHHHHHHHHHhcCc
Confidence 4455555667788999999999975 34566777899999999887 89999999999999876655543 33478
Q ss_pred EEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCccccccCcccccE
Q psy8850 112 RVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDL 191 (397)
Q Consensus 112 ~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~ 191 (397)
+++.++.. |++++++++++++++|++++++||||.+.++++|+++|+++|+++|+|++|..+.....+ .+++|+
T Consensus 126 ~v~~v~~~-----d~~~l~~~i~~~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~a~~~~~~pl-~~gaDi 199 (405)
T PRK08776 126 ALITADLT-----DPRSLADALAQSPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLSPALQKPL-EFGADL 199 (405)
T ss_pred EEEEECCC-----CHHHHHHhcCcCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCCcccccCCcc-cccCCE
Confidence 88888753 889999999999999999999999999999999999999999999999999866532222 358899
Q ss_pred EEecccc-ccCCCC--ceEEEEecC-CCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8850 192 MSFSAHK-IYGPKG--IGALYIRRN-PRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQK 267 (397)
Q Consensus 192 ~~~s~~K-~~g~~g--~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~ 267 (397)
+++|++| +.|+.+ .|+++.+++ ..+++...... .....+....+.+...++ .++.+.++..+++.
T Consensus 200 vv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~~~~-------~g~~~s~~~a~l~~~gl~----tl~~r~~~~~~na~ 268 (405)
T PRK08776 200 VLHSTTKYINGHSDVVGGAVVARDAELHQQLVWWANA-------LGLTGSPFDAFLTLRGLR----TLDARLRVHQENAD 268 (405)
T ss_pred EEecCceeecCCCCceEEEEEeCCHHHHHHHHHHHHh-------cCCCCCHHHHHHHHhhhC----cHHHHHHHHHHHHH
Confidence 9999999 555543 477766543 22222211110 011223333333333333 45667888888999
Q ss_pred HHHHHHhhhcCcEEEeCCCC--------------CCCCceEEEEecCC-C-hHHHHHHhC--CcEecccCccCC----CC
Q psy8850 268 RLYNGLMESIEEIYINGDMN--------------NRIPHNLNISFNFI-E-GESLLMAIK--DIAVSSGSACTS----AS 325 (397)
Q Consensus 268 ~l~~~l~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~-~-~~~~~~~l~--~i~~~~g~~~~~----~~ 325 (397)
.+.+.|++ .|.+.-+.-|+ ...++++.|.+++. + ..++.+.|+ .+...-|...+. ..
T Consensus 269 ~la~~L~~-~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~l~~~~~s~G~~~sl~~~p~~ 347 (405)
T PRK08776 269 AIAALLDG-HAAVNQVYYPGLASHPGHALAARQQKGFGAMLSFELEGGEAAVRAFVDGLRYFTLAESLGGVESLIAHPAS 347 (405)
T ss_pred HHHHHHHc-CCCeeEEECCCCCCCcCHHHHHhcCCCCceEEEEEEcCCHHHHHHHHHhCCcceEccCCCCCceEEECCcc
Confidence 99999988 77665332211 23467888888641 1 245556665 334444443332 12
Q ss_pred CCh----hhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHHHh
Q psy8850 326 LEP----SYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKLRE 375 (397)
Q Consensus 326 ~~~----~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 375 (397)
+.+ ....+..|+.+ +.||+|++. |++|.+++.|+++++++..
T Consensus 348 ~~h~~~~~~~~~~~gi~~----~liR~svGl----E~~~dli~dl~~al~~~~~ 393 (405)
T PRK08776 348 MTHAAMTAEARAAAGISD----GLLRLSVGI----ESAEDLLIDLRAGLARAEA 393 (405)
T ss_pred cccccCCHHHHHhcCCCC----CeEEEEeCc----CCHHHHHHHHHHHHHHhHH
Confidence 211 12234556554 899999997 5666666666666665543
No 180
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.95 E-value=1.9e-26 Score=215.45 Aligned_cols=307 Identities=15% Similarity=0.142 Sum_probs=204.6
Q ss_pred cchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHH-HhhCCc
Q psy8850 33 HIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRK-LENDGF 111 (397)
Q Consensus 33 ~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~-~~~~g~ 111 (397)
+.+++...+...++++.++++.|.+ +.+ ++++|+.|+.+++. +. ++||+|+++++.|+++...+.. +...|.
T Consensus 46 ~~y~r~~~p~~~~le~~lA~l~g~~-~~v-~~~sG~~ai~~~l~-~l----~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~ 118 (390)
T PRK08064 46 YDYSRSGNPTREALEDIIAELEGGT-KGF-AFASGMAAISTAFL-LL----SKGDHVLISEDVYGGTYRMITEVLSRFGI 118 (390)
T ss_pred CcccCCCChhHHHHHHHHHHHhCCC-CeE-EECCHHHHHHHHHH-Hh----CCCCEEEEccCccchHHHHHHHHHHHcCC
Confidence 4455555678899999999999987 344 45666778887775 45 6899999999999987766654 344599
Q ss_pred EEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCccccccCcccccE
Q psy8850 112 RVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDL 191 (397)
Q Consensus 112 ~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~ 191 (397)
+++.++.+ |++++++++++++++|++++|+||||.+.|+++|.++|+++|+++++|++++.+...... .+++|+
T Consensus 119 ~v~~v~~~-----d~~~l~~~l~~~tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~~~-~~g~Di 192 (390)
T PRK08064 119 EHTFVDMT-----NLEEVAQNIKPNTKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDNTFLTPLLQKPL-DLGADV 192 (390)
T ss_pred EEEEECCC-----CHHHHHHhcCCCceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEECCCCcccccCch-hhCCcE
Confidence 99999874 789999999999999999999999999999999999999999999999998866542222 458999
Q ss_pred EEecccc-ccCCCC--ceEEEEec-CCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8850 192 MSFSAHK-IYGPKG--IGALYIRR-NPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQK 267 (397)
Q Consensus 192 ~~~s~~K-~~g~~g--~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~ 267 (397)
++.|+|| +.|+.| .|++++++ +..+.+......++ ...+....+.+...++ .+..+.++..+++.
T Consensus 193 vv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~~~g-------~~~~~~~a~l~~~gl~----tl~~R~~~~~~~a~ 261 (390)
T PRK08064 193 VLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFLQNSFG-------AVLGVQDCWLVLRGLK----TLHVRLEHSSETAN 261 (390)
T ss_pred EEeecceeccCCccceeEEEEeCCHHHHHHHHHHHHhcC-------CCCCHHHHHHHHcccC----cHHHHHHHHHHHHH
Confidence 9999999 566655 48777764 34444443332211 0111111111111111 24567777788888
Q ss_pred HHHHHHhhhcCcEE-EeCC-------------CCCCCCceEEEEecCCC-hHHHHHHhC--CcEecccCccCC----CCC
Q psy8850 268 RLYNGLMESIEEIY-INGD-------------MNNRIPHNLNISFNFIE-GESLLMAIK--DIAVSSGSACTS----ASL 326 (397)
Q Consensus 268 ~l~~~l~~~~~~~~-~~~~-------------~~~~~~~~~~~~~~~~~-~~~~~~~l~--~i~~~~g~~~~~----~~~ 326 (397)
.+.+.|++ .+.+. +.-+ .....++++.|.+++.+ ...+.+.+. .+.++.|...+. ..+
T Consensus 262 ~la~~L~~-~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~~~~~~~~f~~~l~l~~~~~s~G~~~sl~~~~~~~ 340 (390)
T PRK08064 262 KIALYLQE-HPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQSEEAVRQFVSHVKLPVFAVSLGAVESILSYPAKM 340 (390)
T ss_pred HHHHHHhc-CCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEECCHHHHHHHHHhCCcceEcccCCCCcceeECCccc
Confidence 88888887 55442 2211 11234568888886422 223333433 235666643332 111
Q ss_pred Ch----hhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHH
Q psy8850 327 EP----SYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 368 (397)
Q Consensus 327 ~~----~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~ 368 (397)
.+ .......|+. .+.||+|++.+.+++.++.+.++|++
T Consensus 341 ~h~~~~~~~~~~~gi~----~~liR~SvGle~~~dli~dl~~Al~~ 382 (390)
T PRK08064 341 SHAAMPKEERDERGIT----DGLLRLSVGLENVDDLIADFEQALSY 382 (390)
T ss_pred ccccCCHHHHHhcCCC----CCeEEEEeccCCHHHHHHHHHHHHHh
Confidence 11 1122234443 38999999997777777777766665
No 181
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.95 E-value=5.8e-26 Score=211.28 Aligned_cols=307 Identities=13% Similarity=0.103 Sum_probs=211.2
Q ss_pred cchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHHhh-CCc
Q psy8850 33 HIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLEN-DGF 111 (397)
Q Consensus 33 ~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~-~g~ 111 (397)
+.+++...+...++++.++++.+. +++++++|+++|+.+++.++. ++||+|+++.+.|+++...+..+.. .+.
T Consensus 43 ~~Y~R~~~p~~~~le~~lA~l~g~--~~v~~~~gg~~Ai~~~l~all----~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~ 116 (382)
T TIGR02080 43 YDYSRSGNPTRDLLQQALAELEGG--AGAVVTNTGMSAIHLVTTALL----GPDDLLVAPHDCYGGTYRLLNALAKKGCF 116 (382)
T ss_pred CcccCCCCchHHHHHHHHHHHhCC--CcEEEEcCHHHHHHHHHHHHc----CCCCEEEEcCCCcHHHHHHHHHHHhhcCe
Confidence 334555566788999999999995 479999999999999999987 7999999999999988776665433 367
Q ss_pred EEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCccccccCcccccE
Q psy8850 112 RVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDL 191 (397)
Q Consensus 112 ~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~ 191 (397)
++..++. .|++++++++++++++|++++|+||||.+.|+++|+++|+++|+++++|++|..+.....+ ..++|+
T Consensus 117 ~v~~~d~-----~d~~~l~~ai~~~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~pl-~~gaDi 190 (382)
T TIGR02080 117 RVLFVDQ-----GDEQALRAALAQKPKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVVDNTFLSPALQNPL-ALGADL 190 (382)
T ss_pred EEEEECC-----CCHHHHHHhcCcCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCcccccCCch-hhCCCE
Confidence 7777653 3799999999999999999999999999999999999999999999999999866543222 347899
Q ss_pred EEecccc-ccCCCC--ceEEEEecC-CCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8850 192 MSFSAHK-IYGPKG--IGALYIRRN-PRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQK 267 (397)
Q Consensus 192 ~~~s~~K-~~g~~g--~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~ 267 (397)
++.|++| +.|+.+ .|+++.++. ..+.+...... .....+....+.+...++ .+..+.++..+++.
T Consensus 191 vv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~~~~-------~g~~~sp~~a~l~lr~l~----tl~~R~~~~~~na~ 259 (382)
T TIGR02080 191 VLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAWWANN-------LGVTGGAFDSYLTLRGLR----TLVARMRLQQRNAQ 259 (382)
T ss_pred EEeecceeccCCCCceeEEEEeCCHHHHHHHHHHHHc-------cCCCCCHHHHHHHHcccc----hHHHHHHHHHHHHH
Confidence 9999999 555555 577766533 32323211110 011222222222222333 34455777788888
Q ss_pred HHHHHHhhhcCcEEEeCCCC--------------CCCCceEEEEecCC-C-hHHHHHHhC--CcEecccCccCC----CC
Q psy8850 268 RLYNGLMESIEEIYINGDMN--------------NRIPHNLNISFNFI-E-GESLLMAIK--DIAVSSGSACTS----AS 325 (397)
Q Consensus 268 ~l~~~l~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~-~-~~~~~~~l~--~i~~~~g~~~~~----~~ 325 (397)
.+.+.|++ .|.+..+.-|. ...++++.|.+++. . ..++.+.|+ .+...-|...+. ..
T Consensus 260 ~~a~~L~~-~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~ 338 (382)
T TIGR02080 260 AIVEYLQT-QPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELKGGEQTVRRFLGGLSLFTLAESLGGVESLIAHPAT 338 (382)
T ss_pred HHHHHHHh-CCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEecCcHHHHHHHHHcCCcceEeccCCCCcceeECCCc
Confidence 99999988 77665332211 23467888888631 1 235555665 445555544332 11
Q ss_pred CCh----hhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHH
Q psy8850 326 LEP----SYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVK 371 (397)
Q Consensus 326 ~~~----~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 371 (397)
+.+ ....+..|+.+ +.||||++. |+.|.+++.|.++++
T Consensus 339 ~~~~~~~~~~~~~~gi~~----~liRlsvGl----E~~~dl~~dl~~al~ 380 (382)
T TIGR02080 339 MTHAAMGPEARAEAGISD----TLLRLSVGL----EDADDLIADLEQGLR 380 (382)
T ss_pred cCcccCCHHHHHhcCCCc----CeEEEEecc----CCHHHHHHHHHHHHh
Confidence 111 12234566654 899999997 667777777777765
No 182
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=1.1e-25 Score=206.88 Aligned_cols=295 Identities=17% Similarity=0.116 Sum_probs=210.8
Q ss_pred CCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhC---CCCCcEEEeCChhHHHHHHHHHhHhhh
Q psy8850 6 TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIY---ADPREIIWTSGATESNNLAIKGAAHFY 82 (397)
Q Consensus 6 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~---~~~~~i~~~~g~t~a~~~~l~~l~~~~ 82 (397)
..++|+.+++++.+.+.... .. .|. .....+++++++++++ +++++|++|+|+++++.+++.++
T Consensus 30 ~~~~p~~~~~~~~~~~~~~~---~~-~Y~-----~~~~~~Lr~aia~~~~~~~~~~~~i~it~Ga~~~i~~~~~~~---- 96 (335)
T PRK14808 30 PFPFPEDLVDEVFRRLNSDT---LR-IYY-----DSPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLMF---- 96 (335)
T ss_pred CCCCCHHHHHHHHHHhhhhh---hh-cCC-----CCChHHHHHHHHHHhCCCCCCcceEEEcCCHHHHHHHHHHHh----
Confidence 34678899999988764310 00 111 1136788999999998 78889999999999999998865
Q ss_pred ccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHH
Q psy8850 83 KKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELC 162 (397)
Q Consensus 83 ~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~ 162 (397)
+.|++.+|+|+.+...+... |.+++.+|.++++.++... + ++++++++++|+||||.+++.+++.+++
T Consensus 97 ----d~v~v~~P~y~~~~~~~~~~---g~~~~~v~~~~~~~~~~~~----~-~~~~~i~i~nP~NPTG~~~s~~~l~~l~ 164 (335)
T PRK14808 97 ----DRSVFFPPTYSCYRIFAKAV---GAKFLEVPLTKDLRIPEVN----V-GEGDVVFIPNPNNPTGHVFEREEIERIL 164 (335)
T ss_pred ----CcEEECCCCHHHHHHHHHHc---CCeEEEecCCCcCCCChhH----c-cCCCEEEEeCCCCCCCCCcCHHHHHHHH
Confidence 46999999999999988888 9999999998777554332 2 3578999999999999999999999998
Q ss_pred HhcCcEEEEecccccCc--cccc-cCcccccEEEeccccccCCCC--ceEEEEecCCCCccccccccCCccccccCCCCc
Q psy8850 163 RSKGVIFHCDAAQAVGK--IDIN-IQNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLA 237 (397)
Q Consensus 163 ~~~gi~livD~a~~~~~--~~~~-~~~~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (397)
+++++||+|++|.-.. .... .......+++.|++|.+|.+| +|+++++++....+...... . ..+
T Consensus 165 -~~~~~ii~DE~Y~~f~~~~~~~~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~~~~~~~l~~~~~~--------~-~~~ 234 (335)
T PRK14808 165 -KTGAFVALDEAYYEFHGESYVDLLKKYENLAVIRTFSKAFSLAAQRIGYVVSSEKFIDAYNRVRLP--------F-NVS 234 (335)
T ss_pred -hcCCEEEEECchhhhcCCchHHHHHhCCCEEEEEechhhccCcccceEEEEeCHHHHHHHHHhcCC--------C-CCC
Confidence 5899999999987321 1111 112245688899999766445 79999887665555433211 1 223
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCChHHHHHHhC--CcEe
Q psy8850 238 THQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAIK--DIAV 315 (397)
Q Consensus 238 ~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~i~~ 315 (397)
.....+..++++. .+.+.+..+.+.+.++++.+.|++ + ++.+..+ . ++++++.++..+..++.+.+. ||.+
T Consensus 235 ~~~q~a~~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~-~-g~~~~~~-~---g~f~~~~l~~~~~~~~~~~l~~~Gi~V 307 (335)
T PRK14808 235 YVSQMFAKVALDH-REIFEERTKFIVEERERMKSALRE-M-GYRITDS-R---GNFVFIFMEKEEKERLLEHLRAKNIAV 307 (335)
T ss_pred HHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHHHH-C-CCEECCC-C---CeEEEEeCCCccHHHHHHHHHHCCeEE
Confidence 3333444556653 234566667777888899999988 4 6665543 2 456677776545567777665 8888
Q ss_pred cccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHH
Q psy8850 316 SSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (397)
Q Consensus 316 ~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 369 (397)
+. | ..++||+++ +.+++++++++|+++
T Consensus 308 ~~---~---------------------~~~~Risi~---~~~~~~~~~~~l~~~ 334 (335)
T PRK14808 308 RS---F---------------------REGVRITIG---KREENDMILKELEVF 334 (335)
T ss_pred EE---C---------------------CCCeEEecC---CHHHHHHHHHHHHhh
Confidence 62 1 157999998 589999999999753
No 183
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.95 E-value=9.8e-26 Score=209.95 Aligned_cols=338 Identities=15% Similarity=0.149 Sum_probs=238.9
Q ss_pred CCCCCCCHHHHHHHHHHHhhcc--CCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhh
Q psy8850 4 SATTPIDPRVVDKMIPYLRVQF--GNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHF 81 (397)
Q Consensus 4 ~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~ 81 (397)
+|...+++.+++++...+...+ +.|....|.......+....+.+..+++|+++..++.. .||+.|+..++.+++
T Consensus 56 asEN~~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~a~~anvqp-~Sg~~An~~v~~all-- 132 (493)
T PRK13580 56 ASENYSSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKELFGAEHAYVQP-HSGADANLVAFWAIL-- 132 (493)
T ss_pred cccccCCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHHhCCCcccccC-CCcHHHHHHHHHHHh--
Confidence 4566789999999998887755 56665344333344455555899999999998766665 466679999999988
Q ss_pred hccC-------------------------------CCEEEEcCCCChhhHHHH---HHHhhCCcEEEEeccC-CCCCCCH
Q psy8850 82 YKKR-------------------------------GKHIITVQTEHKSVLDSI---RKLENDGFRVTYLKPK-NNGLITL 126 (397)
Q Consensus 82 ~~~~-------------------------------g~~vl~~~~~~~s~~~~~---~~~~~~g~~v~~v~~~-~~~~~d~ 126 (397)
+| ||+|+..+..++.+...- ... ....+...++++ +++.+|.
T Consensus 133 --~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~-~~~~~~~~y~vd~~~g~iD~ 209 (493)
T PRK13580 133 --AHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNIS-GKMFHQRSYGVDPDTGLLDY 209 (493)
T ss_pred --cccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchh-hheeeeEecccCcccCccCH
Confidence 44 789988877765553321 111 012566677777 5689999
Q ss_pred HHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCccccccC------cccccEEEecccc-c
Q psy8850 127 SQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQ------NYKVDLMSFSAHK-I 199 (397)
Q Consensus 127 ~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~------~~~~d~~~~s~~K-~ 199 (397)
++++++++++++.|++++.+|. |...|+++|.++|+++|+++++|++|++|.+..+.. ..++|++++|+|| +
T Consensus 210 d~l~~~~~~~~plvii~g~S~~-~~~~dl~~i~eia~~~gA~L~VD~AH~~Gligg~~~~~~~~~~~~~D~vtgT~hKaL 288 (493)
T PRK13580 210 DEIAALAREFKPLILVAGYSAY-PRRVNFAKLREIADEVGAVLMVDMAHFAGLVAGKVFTGDEDPVPHADIVTTTTHKTL 288 (493)
T ss_pred HHHHHHHhhcCCEEEEeCcccc-CCCcCHHHHHHHHHHcCCEEEEECchhhceeccccchhhcCCCCCCcEEEeCChhhc
Confidence 9999999999999999999888 557899999999999999999999999887653331 1268999999999 6
Q ss_pred cCCCCceEEEEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhhcC
Q psy8850 200 YGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARI-EMKEELKRILFLQKRLYNGLMESIE 278 (397)
Q Consensus 200 ~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~ 278 (397)
+||.| |+++++++..+.+... ..+..|++..+.+++...++..+.+ +.+++++++.++.++|++.|.+ .
T Consensus 289 ~GP~G-G~I~~~~~l~~~L~~a-------~P~i~gg~l~p~iAA~avAl~e~~~~ef~~y~~~l~~Na~~La~~L~~--~ 358 (493)
T PRK13580 289 RGPRG-GLVLAKKEYADAVDKG-------CPLVLGGPLPHVMAAKAVALAEARTPEFQKYAQQVVDNARALAEGFLK--R 358 (493)
T ss_pred cCCCe-EEEEecHHHHHHHhhC-------CCcccCCCccHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHh--c
Confidence 79986 9999987655444211 1133345556677777677776643 3577899999999999999998 6
Q ss_pred cEEEeCCCCCCCCceEEEEecCCC--hHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCC-
Q psy8850 279 EIYINGDMNNRIPHNLNISFNFIE--GESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRF- 353 (397)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~- 353 (397)
|+.+.... ...+++.+.+.+.. ...+.+.|. ||.+..-..... ....+....|||+++..
T Consensus 359 G~~vv~gg--TdshIV~V~lg~~~~~g~~a~~~L~e~GI~vn~i~~Ptv-------------p~g~~~~srLRIg~~A~t 423 (493)
T PRK13580 359 GARLVTGG--TDNHLVLIDVTSFGLTGRQAESALLDAGIVTNRNSIPSD-------------PNGAWYTSGIRLGTPALT 423 (493)
T ss_pred CCCccCCC--CCCCEEEEEeCCHHHHHHHHHHHHHHCCeEEccccCCCC-------------CCCCCCCceEEeccchhh
Confidence 77765321 22567777775432 234555665 777654321110 00111247799998873
Q ss_pred ---CCHHHHHHHHHHHHHHHHHH
Q psy8850 354 ---TTEKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 354 ---~~~~~i~~~~~~l~~~~~~~ 373 (397)
++++||+++++.|.++++..
T Consensus 424 trg~teedi~~iad~l~~~l~~~ 446 (493)
T PRK13580 424 TLGMGSDEMDEVAELIVKVLSNT 446 (493)
T ss_pred hcCCCHHHHHHHHHHHHHHHHhh
Confidence 46999999999999887644
No 184
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.95 E-value=9.5e-26 Score=214.30 Aligned_cols=309 Identities=17% Similarity=0.069 Sum_probs=200.0
Q ss_pred HHHHHHHHHHHHh----C--CCCCcEEEeCChhHHHHHHHHHhHhhh-ccCCCEEEE-cCCCChhhHHHHHHHhhC-CcE
Q psy8850 42 AIEKARNEVAQLI----Y--ADPREIIWTSGATESNNLAIKGAAHFY-KKRGKHIIT-VQTEHKSVLDSIRKLEND-GFR 112 (397)
Q Consensus 42 ~~~~~~~~la~~~----~--~~~~~i~~~~g~t~a~~~~l~~l~~~~-~~~g~~vl~-~~~~~~s~~~~~~~~~~~-g~~ 112 (397)
...++|+++++++ | +++++|++|+|+++|+.+++.++.... .++||.|++ ..|+|+.+.......... +..
T Consensus 75 G~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~ 154 (416)
T PRK09440 75 GKDELIEALAALLNERYGWNISPQNIALTNGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYR 154 (416)
T ss_pred CCHHHHHHHHHHHHHHhCCCCChhhEEEccChHHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceeecc
Confidence 3456666666665 3 678899999999999999999887200 015789999 699999987754432111 222
Q ss_pred EEEeccCC---CCCCCHHHHHHHhcCCceEEEEecccCccccccc---HHHHHHHHHhcCcEEEEecccccCcccc---c
Q psy8850 113 VTYLKPKN---NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---ILEIGELCRSKGVIFHCDAAQAVGKIDI---N 183 (397)
Q Consensus 113 v~~v~~~~---~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~---l~~i~~l~~~~gi~livD~a~~~~~~~~---~ 183 (397)
+..++++. ...+|+++++ +.++++++++++|+||||.+++ +++|+++|++||++||+|++|+...... +
T Consensus 155 ~~~~~~~~~~~~~~~d~~~l~--~~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~ 232 (416)
T PRK09440 155 PNIELLPEGQFKYHVDFEHLH--IDEDTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGIIFSE 232 (416)
T ss_pred cccccccccccccCCCHHHcc--cCCCceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCcchhh
Confidence 22333332 2468999997 4667899999999999999999 5678889999999999999997321111 1
Q ss_pred cC--cccccEEEeccccccCCCC--ceEEEEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHH--HHHHHHH
Q psy8850 184 IQ--NYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRL--ARIEMKE 257 (397)
Q Consensus 184 ~~--~~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~--~~~~~~~ 257 (397)
.. ..+..+++.|++|. +.+| +|+++++++..+.+...... ...+.+.....++..+++. +...+.+
T Consensus 233 ~~~~~~~~vI~~~SfSK~-~~pGlRiG~~i~~~~l~~~~~~~~~~-------~~~~~s~~~q~~~~~~l~~~~~~~~~~~ 304 (416)
T PRK09440 233 ATPLWNPNIILCMSLSKL-GLPGVRCGIVIADEEIIEALSNMNGI-------ISLAPGRLGPAIAAEMIESGDLLRLSET 304 (416)
T ss_pred cCccccCCeEEEeccccc-CCCcceEEEEeCCHHHHHHHHHHHHH-------hccCCCcHHHHHHHHHhccchHHHHHHH
Confidence 11 12355888999994 4334 78888876655544332211 1112333344444445532 1122223
Q ss_pred -HHHHHHHHHHHHHHHHhhhcCc--EEEeCCCCCCCCceEEEEecC--CChHHHHHHhC--CcEecccCccCCCCCChhh
Q psy8850 258 -ELKRILFLQKRLYNGLMESIEE--IYINGDMNNRIPHNLNISFNF--IEGESLLMAIK--DIAVSSGSACTSASLEPSY 330 (397)
Q Consensus 258 -~~~~~~~~~~~l~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~--~i~~~~g~~~~~~~~~~~~ 330 (397)
+.+.++++++.+++.|.+.+++ +.+..+.+ +.++++.++. .+..++...+. ||.+.+|..|.++...
T Consensus 305 ~~~~~~~~r~~~~~~~L~~~l~~~~~~~~~p~g---g~fiw~~~~~~~~~~~~~~~~l~~~gV~v~pg~~F~~~~~~--- 378 (416)
T PRK09440 305 VIRPFYRQKVQLAIALLRRYLPDEPCLIHKPEG---AIFLWLWFKDLPITTEELYQRLKARGVLVVPGHYFFPGLDE--- 378 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCCeEEecCCC---ceEEEEECCCCCCCHHHHHHHHHHCCEEEechHhhCCCCcc---
Confidence 4566777778888888774443 34344433 4566777764 45667777665 8999999766541100
Q ss_pred HHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHHHh
Q psy8850 331 VLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKLRE 375 (397)
Q Consensus 331 ~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 375 (397)
......+++||+++. +.+++++++++|++++++.++
T Consensus 379 -------~~~~~~~~iRis~~~--~~~~l~~~i~~l~~~~~~~~~ 414 (416)
T PRK09440 379 -------DWPHAHQCIRMNYVQ--DDEEIEKGIAILAEEVEKAYA 414 (416)
T ss_pred -------ccCCcCceEEEEecC--CHHHHHHHHHHHHHHHHHHhh
Confidence 000013689999984 689999999999999877554
No 185
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.95 E-value=1.6e-25 Score=205.51 Aligned_cols=304 Identities=16% Similarity=0.100 Sum_probs=227.7
Q ss_pred hhhhHHHHHHHHHHHHHHHhCCCCCc--EEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHHhhCCc-
Q psy8850 35 YGWTAEKAIEKARNEVAQLIYADPRE--IIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGF- 111 (397)
Q Consensus 35 ~~~~~~~~~~~~~~~la~~~~~~~~~--i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~- 111 (397)
.+..+.+.+.++++.|+++++.+.+. +++++|||.++++++.+++. ++|++|++.. ..+.....+.+...|.
T Consensus 33 Rs~~F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~---~~g~~vLv~g--~FG~r~~~eia~~~g~~ 107 (374)
T TIGR01365 33 RSKLGKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLG---CRGVDVLAWE--SFGKGWVTDVTKQLKLP 107 (374)
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCC---CCCCeEEEEC--HHHHHHHHHHHHhcCCC
Confidence 36788899999999999999985443 67799999999999999883 3677888743 3333323245555588
Q ss_pred EEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCccccccCcccccE
Q psy8850 112 RVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDL 191 (397)
Q Consensus 112 ~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~ 191 (397)
++..+..+....+++++++. + +.|+++|..++||+..|++++...+ +++++++|++.++|..++++. ++|+
T Consensus 108 ~v~~l~~~~g~~~~~~~ve~----~-~~v~~vhnETSTGv~npv~~i~~~~--~~~lliVDavSs~g~~~l~~d--~iDv 178 (374)
T TIGR01365 108 DVRVLEAEYGKLPDLKKVDF----K-NDVVFTWNGTTSGVRVPNGDFIPAD--REGLTICDATSAAFAQDLDYH--KLDV 178 (374)
T ss_pred CcEEEcCCCCCCCCHHHcCC----C-CCEEEecCCCchheecccccccccc--CCCcEEEEccchhcCCCCChh--HCcE
Confidence 47888777666789999973 1 2367999999999999997665322 589999999999999999888 5999
Q ss_pred EEecccc-ccCCCCceEEEEecCCCCccccc--------cccCCc--------cccccCCCCchhHHHHHHHHHHHHHH-
Q psy8850 192 MSFSAHK-IYGPKGIGALYIRRNPRTRIEAQ--------IHGGGH--------EYGLRSGTLATHQIVGMGEAFRLARI- 253 (397)
Q Consensus 192 ~~~s~~K-~~g~~g~g~~~~~~~~~~~~~~~--------~~~~~~--------~~~~~~~~~~~~~~~~l~~al~~~~~- 253 (397)
++.|.+| +.+|+|+++++++++.+++.+.. +..... ..+..+.||++..+.++..+++++.+
T Consensus 179 ~~tgsQK~L~~ppGls~v~vs~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~e 258 (374)
T TIGR01365 179 VTFSWQKVLGGEGAHGMLILSPRAVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVEDWLDALKWAESI 258 (374)
T ss_pred EEEechhccCCCCceEEEEECHHHHHHHhhcCCCCCChhhhccccccchhhhhhcCCCCCChHHHHHHHHHHHHHHHHHc
Confidence 9999999 77899999999998876654321 111000 01345667777788888888887755
Q ss_pred -HHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCC-CCCCCCceEEEEecC--C-----C-----hHHHHHHhC--CcEecc
Q psy8850 254 -EMKEELKRILFLQKRLYNGLMESIEEIYINGD-MNNRIPHNLNISFNF--I-----E-----GESLLMAIK--DIAVSS 317 (397)
Q Consensus 254 -~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~-----~-----~~~~~~~l~--~i~~~~ 317 (397)
|++++.++++++++.+++++++ ++.+.+... +..+.+..+.+.++. . + ..++...++ |+.+.+
T Consensus 259 gGle~~~~Rh~~~a~~l~~~l~~-lg~l~~~~~~~~~rS~tvt~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~ 337 (374)
T TIGR01365 259 GGLKPLIARADDNLAVLEAFVAK-NNWIHFLAETPEIRSNTSVCLKVVDPAIDALDEDAQADFAKELISTLEKEGVAYDI 337 (374)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHH-CCCcccCCCChhhcCCCeEEEEeCCccccccccchhhHHHHHHHHHHHHCCEEEec
Confidence 6999999999999999999999 654666653 344556666677643 2 2 466776765 787876
Q ss_pred cCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHH
Q psy8850 318 GSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKK 372 (397)
Q Consensus 318 g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 372 (397)
|... ..+..+||+....++.+||+.+++.|.=+.++
T Consensus 338 G~~~-------------------~~~~~fRIg~~G~i~~~di~~l~~~l~~~~~~ 373 (374)
T TIGR01365 338 GSYR-------------------DAPSGLRIWCGATVEKSDLECLCPWLDWAFAL 373 (374)
T ss_pred cccc-------------------cCCCceEEecCCcCCHHHHHHHHHHHHHHHhc
Confidence 6421 12478999999999999999999999876653
No 186
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.95 E-value=2.8e-25 Score=209.17 Aligned_cols=315 Identities=16% Similarity=0.150 Sum_probs=210.9
Q ss_pred hhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHH-HhhCCcEE
Q psy8850 35 YGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRK-LENDGFRV 113 (397)
Q Consensus 35 ~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~-~~~~g~~v 113 (397)
+++...+....+++.++++.|.+ ..++++||+.|+..++.++. ++||+|+++++.|+++...+.. +...|+++
T Consensus 58 y~r~~~p~~~~Le~~lA~leg~~--~al~~~sG~~Ai~~al~~ll----~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v 131 (431)
T PRK08248 58 YTRIMNPTTDVFEKRIAALEGGI--GALAVSSGQAAITYSILNIA----SAGDEIVSSSSLYGGTYNLFAHTLPKLGITV 131 (431)
T ss_pred eECCCCchHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHHh----CCCCEEEEccCchhhHHHHHHHHHHhCCEEE
Confidence 33444567888999999999965 68889999999999998887 7999999999999887766654 34459999
Q ss_pred EEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCccccccCcccccEEE
Q psy8850 114 TYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMS 193 (397)
Q Consensus 114 ~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~ 193 (397)
+.++.. |++++++++++++++|++++++||||.+.|+++|.++|+++|+++|+|++++.+....++ .+++|+++
T Consensus 132 ~~vd~~-----d~e~l~~ai~~~tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD~t~a~~~~~~pl-~~gaDivv 205 (431)
T PRK08248 132 KFVDPS-----DPENFEAAITDKTKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVDNTFASPYLLRPI-EHGADIVV 205 (431)
T ss_pred EEECCC-----CHHHHHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEeCCCCccccCChh-HcCCCEEE
Confidence 999864 899999999999999999999999999999999999999999999999999855443333 46899999
Q ss_pred eccccccCCCC--ceEEEEecCCCCcc-ccc---ccc----C------Cc-------------cccccCCCCchhHHHHH
Q psy8850 194 FSAHKIYGPKG--IGALYIRRNPRTRI-EAQ---IHG----G------GH-------------EYGLRSGTLATHQIVGM 244 (397)
Q Consensus 194 ~s~~K~~g~~g--~g~~~~~~~~~~~~-~~~---~~~----~------~~-------------~~~~~~~~~~~~~~~~l 244 (397)
.|++|++|+.| +|.+++........ ... ... + .. .........+....+.+
T Consensus 206 ~S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~ 285 (431)
T PRK08248 206 HSATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYTDAVGEAAYITKARVQLLRDLGAALSPFNSFLL 285 (431)
T ss_pred EcCccccCCCCCceEEEEEeCCccccccccccccccCCccccccchhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 99999666555 55555542211000 000 000 0 00 00000011111111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCC---------------CCCCceEEEEecCC--ChHHHH
Q psy8850 245 GEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMN---------------NRIPHNLNISFNFI--EGESLL 307 (397)
Q Consensus 245 ~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~--~~~~~~ 307 (397)
...++ .++.+.++..+++..+.+.|++ .|.+..+.-|. ...++++.|.+++- ....+.
T Consensus 286 ~rgl~----tl~~R~~~~~~nA~~la~~L~~-~p~v~~V~yPgl~s~p~~~~~~~~~~~g~gg~~sf~l~~~~~~~~~f~ 360 (431)
T PRK08248 286 LQGLE----TLHLRMERHSENALAVAKFLEE-HEAVEWVSYPGLPSHPSYELAKKYLPKGQGAILTFGIKGGVEAGKKLI 360 (431)
T ss_pred hcCcC----cHHHHHHHHHHHHHHHHHHHHh-CCCcceEECCCCCCCccHHHHHHhCcCCCceEEEEEecCCHHHHHHHH
Confidence 11111 2556788889999999999998 77764332211 23467888888642 134566
Q ss_pred HHhC--CcEecccCccCC----CCCCh----hhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHHH
Q psy8850 308 MAIK--DIAVSSGSACTS----ASLEP----SYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKLR 374 (397)
Q Consensus 308 ~~l~--~i~~~~g~~~~~----~~~~~----~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 374 (397)
+.|+ .+..+-|...+. ..+.+ ....+..|+.+ +.||||++. |+.|.+++.|.++++..+
T Consensus 361 ~~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~~~~~~~gi~~----~liRlsvGl----Ed~~dL~~Dl~~Al~~~~ 429 (431)
T PRK08248 361 DSVKLFSHLANVGDSKSLIIHPASTTHQQLSEEEQLAAGVTP----GLVRLSVGT----EAIDDILDDLRQAIRQSQ 429 (431)
T ss_pred HhCCcceeccccCCCCeeeeCCCcCccccCCHHHHHhcCCCC----CeEEEEecc----CCHHHHHHHHHHHHHhhh
Confidence 6665 444444544332 22211 12234566664 899999997 677778888887776544
No 187
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.95 E-value=1.5e-25 Score=213.14 Aligned_cols=293 Identities=14% Similarity=0.089 Sum_probs=194.4
Q ss_pred CcEEEeCChhHHHHHHHHHhHh-hhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccC--CCCCCCHHHHHHHhcC
Q psy8850 59 REIIWTSGATESNNLAIKGAAH-FYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPK--NNGLITLSQLEEKICS 135 (397)
Q Consensus 59 ~~i~~~~g~t~a~~~~l~~l~~-~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~i~~ 135 (397)
++|++|+|+++|+..++.++.. ...++||+|++++|.|+.+....... ..|.+++.++.+ .++.+|++++++++++
T Consensus 162 ~~I~vT~Ga~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~-g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~ 240 (527)
T PRK09275 162 FDLFAVEGGTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIPELP-RYDLEVVHINADEENEWQYPDSELEKLRDP 240 (527)
T ss_pred CeEEEeCCHHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHHHc-CCCeEEEEeecCcccCCCCCHHHHHhhcCC
Confidence 3799999999999999886321 12289999999999999998776654 225566666654 3467899999999999
Q ss_pred CceEEEEecccCccccccc---HHHHHHHHHh--cCcEEEEecccccCcc-ccccC--cccccEEEeccccccCCCC--c
Q psy8850 136 DTILVSVMLVNNEIGVIQP---ILEIGELCRS--KGVIFHCDAAQAVGKI-DINIQ--NYKVDLMSFSAHKIYGPKG--I 205 (397)
Q Consensus 136 ~~~~v~~~~~~~~tG~~~~---l~~i~~l~~~--~gi~livD~a~~~~~~-~~~~~--~~~~d~~~~s~~K~~g~~g--~ 205 (397)
++++|++++|+||||.+++ +++|+++|++ +|++||+|++|+.... ...+. .....+++.|++|.+|.+| +
T Consensus 241 ~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~s~~~~~~~~~I~v~SfSK~f~mtG~Rl 320 (527)
T PRK09275 241 SIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDDFRSLFAVLPYNTILVYSFSKYFGATGWRL 320 (527)
T ss_pred CCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcccccCHHHhCCCCEEEEeehhhhccCcHhHH
Confidence 9999999999999999999 6778888964 5999999999973221 11111 1135688999999777666 7
Q ss_pred eEEEEecC-----CCCccc-------------------------cccccCCccccccCCCCchhHHHH-----HHHHHHH
Q psy8850 206 GALYIRRN-----PRTRIE-------------------------AQIHGGGHEYGLRSGTLATHQIVG-----MGEAFRL 250 (397)
Q Consensus 206 g~~~~~~~-----~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~-----l~~al~~ 250 (397)
|+++++++ .+..+. ...........+...+.+.++..+ +.++++.
T Consensus 321 G~i~~~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~all~~ 400 (527)
T PRK09275 321 GVIALHEDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALLDE 400 (527)
T ss_pred hhhhcCchhHHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHhC
Confidence 99988865 221110 000000000111122333333332 2233443
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecC-----------------CChHHHHHHhC--
Q psy8850 251 ARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF-----------------IEGESLLMAIK-- 311 (397)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~l~-- 311 (397)
..+..+..++.++++++.+.+.|.. .+....+ .. ...+++.+.. .++.++...|.
T Consensus 401 ~~~~~~~~~~~~~~Rr~~l~~~Lg~---~~~~~~p-~g--~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~~f~~~Ll~e 474 (527)
T PRK09275 401 EDAYKKAMKDIIRRRYKALYEGLGL---PEPEDPN-NA--AYYTLIDLEEWAEKNYGKEFADYLKKNYSPVDLLFRLAEE 474 (527)
T ss_pred chHHHHHHHHHHHHHHHHHHHHcCC---CCcCCCC-Ce--eEEEEEEhHHhhhhccCchhhhhhhccCCHHHHHHHHHhc
Confidence 3445677788888888888887721 1111111 11 2333343321 24566666665
Q ss_pred -CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHHHhcC
Q psy8850 312 -DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKLRELS 377 (397)
Q Consensus 312 -~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~~ 377 (397)
+|.+.||..|.. .++++|+|+.. .+++++.++.++|.+++.++.+..
T Consensus 475 ~gV~v~PG~~Fg~------------------~~~~vRis~a~-~~~~~~~~~~~rl~~~l~~y~~~~ 522 (527)
T PRK09275 475 TGVVLLPGGGFGG------------------PEWSVRVSLAN-LNEEDYAKIGKAIRKLLDEYYEEY 522 (527)
T ss_pred CCEEEeCchhhCC------------------CCCeEEEEEec-CCHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999976643 13789999975 478999999999999998887643
No 188
>PLN02242 methionine gamma-lyase
Probab=99.95 E-value=1.4e-25 Score=210.58 Aligned_cols=312 Identities=14% Similarity=0.118 Sum_probs=214.0
Q ss_pred cchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHH-hh-CC
Q psy8850 33 HIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKL-EN-DG 110 (397)
Q Consensus 33 ~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~-~~-~g 110 (397)
+.+++...+...++++.+++++|.+ .+++++||++|+.+++.++. ++||+|+++.+.|+++...+... .+ .|
T Consensus 68 ~~Y~r~~~Pt~~~LE~~lA~l~g~~--~~l~~~sG~~Ai~~al~al~----~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G 141 (418)
T PLN02242 68 YIYSRHFNPTVLNLGRQMAALEGTE--AAYCTASGMSAISSVLLQLC----SSGGHVVASNTLYGGTHALLAHFLPRKCN 141 (418)
T ss_pred ccccCCCChhHHHHHHHHHHHhCCC--eEEEEccHHHHHHHHHHHHh----CCCCEEEEcCCcHHHHHHHHHHhhhhccC
Confidence 4445555678899999999999987 57789999999999999988 89999999999998887765432 22 38
Q ss_pred cEEEEeccCCCCCCCHHHHHHHhcC-CceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCccccccCcccc
Q psy8850 111 FRVTYLKPKNNGLITLSQLEEKICS-DTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKV 189 (397)
Q Consensus 111 ~~v~~v~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~ 189 (397)
.+++.++.+ |++++++++++ ++++|++++++||||.+.++++|+++|+++|++||+|++|+... .+...++.
T Consensus 142 ~~~~~~d~~-----d~e~l~~~i~~~~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livDea~~~~~--~~~~~~g~ 214 (418)
T PLN02242 142 ITTTFVDIT-----DLEAVKKAVVPGKTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVDNTFAPMV--LSPARLGA 214 (418)
T ss_pred ceEEEcCCC-----CHHHHHHhcCcCCCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEECCCCccC--CCHHHcCC
Confidence 888777654 89999999988 59999999999999999999999999999999999999997433 23334578
Q ss_pred cEEEeccccccCCCC---ceEEEEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8850 190 DLMSFSAHKIYGPKG---IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQ 266 (397)
Q Consensus 190 d~~~~s~~K~~g~~g---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~ 266 (397)
|+++.|++|.+++.| .|+++.+++....+.....+. ....|.......+.+ .+.. ...+..+.+++.+++
T Consensus 215 divv~S~SK~l~g~g~~~gG~iv~~~~li~~l~~~~~~~----~~~~g~~~~~~~A~l-~~~~--l~tl~~r~~~~~~~a 287 (418)
T PLN02242 215 DVVVHSISKFISGGADIIAGAVCGPAELVNSMMDLHHGA----LMLLGPTMNPKVAFE-LSER--LPHLSLRMKEHCRRA 287 (418)
T ss_pred cEEEEeCccccCCCCCceEEEEEcCHHHHHHHHHHhhhh----hhccCCCCCHHHHHH-HHcC--CCcHHHHHHHHHHHH
Confidence 999999999554433 488888766555544332110 011122221222222 2221 113455778889999
Q ss_pred HHHHHHHhhhcCcEEEeCCC-----C-----------CCCCceEEEEecCCC-hHHHHHHhC------CcEecccCccCC
Q psy8850 267 KRLYNGLMESIEEIYINGDM-----N-----------NRIPHNLNISFNFIE-GESLLMAIK------DIAVSSGSACTS 323 (397)
Q Consensus 267 ~~l~~~l~~~~~~~~~~~~~-----~-----------~~~~~~~~~~~~~~~-~~~~~~~l~------~i~~~~g~~~~~ 323 (397)
+++.+.|++ . ++.+..+. . ...++++.|.+.+.+ ...+.+.++ .+.+..|...+.
T Consensus 288 ~~la~~L~~-~-~~~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~sf~l~~~~~~~~f~~~l~~~~~~~~~~~slG~~~sl 365 (418)
T PLN02242 288 MEYAKRMKE-L-GLKVIYPGLEDHPQHALLKSMANKGYGFGGLLCLDMDTEERANRLMRYLQNSTQFGFMAVSLGYYETL 365 (418)
T ss_pred HHHHHHHHh-C-CCEEECCCCCCCccHHHHHHhcccCCCceeEEEEEECCHHHHHHHHHHhhcccccceeeecCCCCCce
Confidence 999999999 5 45555331 0 234677888886321 345555555 234445544432
Q ss_pred C----CCCh----hhHHHhhCCCccccCceEEEeeCCCCCHH-HHHHHHHHHHHHHHHHH
Q psy8850 324 A----SLEP----SYVLRALGCNDELAHSSIRFTIGRFTTEK-EIDFTIKLLKMKVKKLR 374 (397)
Q Consensus 324 ~----~~~~----~~~~~~~g~~~~~~~~~iRi~~~~~~~~~-~i~~~~~~l~~~~~~~~ 374 (397)
. .+.+ ....+..|+.. +.||||++. | ++|.+++.|.+++++.+
T Consensus 366 ~~~p~~~~~~~~~~~~~~~~gi~~----~liRlsvGl----E~~~~dli~dl~~al~~~~ 417 (418)
T PLN02242 366 MSCSGSSTSSELDPEEKAAAGISP----GLVRMSVGY----TGTLEQRWSQFEKALSAMK 417 (418)
T ss_pred eeCCCccccccCCHHHHHhcCCCC----CeEEEEecC----CCCHHHHHHHHHHHHHHhh
Confidence 1 1111 11223455554 899999997 5 37778888888776653
No 189
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.95 E-value=2.6e-25 Score=208.54 Aligned_cols=313 Identities=14% Similarity=0.135 Sum_probs=206.4
Q ss_pred cchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHH-HhhCCc
Q psy8850 33 HIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRK-LENDGF 111 (397)
Q Consensus 33 ~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~-~~~~g~ 111 (397)
+.+++...+...++++.++++.|.+ ..++++||+.|+.+++.++. ++||+|+++.+.|..+...... +...|+
T Consensus 57 ~~y~r~~~p~~~~le~~lA~l~g~~--~~i~~~sG~~Al~~~l~~ll----~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~ 130 (403)
T PRK07503 57 HFYSRISNPTLALLEQRMASLEGGE--AAVALASGMGAITATLWTLL----RPGDEVIVDQTLYGCTFAFLHHGLGEFGV 130 (403)
T ss_pred ceeeCCCCchHHHHHHHHHHHhCCC--cEEEEcCHHHHHHHHHHHHc----CCCCEEEEccCccchHHHHHHHHHhhCCE
Confidence 3444445567889999999999987 35667788899999998876 7999999999999776654433 334599
Q ss_pred EEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCccccccCcccccE
Q psy8850 112 RVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDL 191 (397)
Q Consensus 112 ~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~ 191 (397)
+++.++.+ |++++++++++++++|++++++||+|.+.|+++|.++|+++|+++|+|++++.+.....+ .+++|+
T Consensus 131 ~v~~vd~~-----d~~~l~~~i~~~tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD~a~a~~~~~~~l-~~g~Di 204 (403)
T PRK07503 131 TVRHVDLT-----DPAALKAAISDKTRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVDNTYCTPYLQRPL-ELGADL 204 (403)
T ss_pred EEEEeCCC-----CHHHHHHhcCccCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCCch-hhCCCE
Confidence 99998875 799999999999999999999999999999999999999999999999999865432222 347899
Q ss_pred EEeccccccCCCC---ceEEEEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8850 192 MSFSAHKIYGPKG---IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKR 268 (397)
Q Consensus 192 ~~~s~~K~~g~~g---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~ 268 (397)
+++|++|++++.| .|+++.+++...+++..... ......++....+.+...++ .+..+.++..+++..
T Consensus 205 ~v~S~tK~l~g~gd~~gG~v~~~~~l~~~l~~~~~~-----~~~g~~~s~~~a~l~l~~L~----tl~~r~~~~~~na~~ 275 (403)
T PRK07503 205 VVHSATKYLGGHGDITAGLVVGGKALADRIRLEGLK-----DMTGAVMSPFDAFLLMRGLK----TLALRMDRHCASAQA 275 (403)
T ss_pred EEccccccccCCCceeEEEEEcCHHHHHHHHhhhHH-----hCcCCCCCHHHHHHHHcCcc----hHHHHHHHHHHHHHH
Confidence 9999999555433 68887666544444321100 00112222222222223333 344455666778888
Q ss_pred HHHHHhhhcCcEEEeCCCC--------------CCCCceEEEEecCC--ChHHHHHHhC--CcEecccCccCC----CCC
Q psy8850 269 LYNGLMESIEEIYINGDMN--------------NRIPHNLNISFNFI--EGESLLMAIK--DIAVSSGSACTS----ASL 326 (397)
Q Consensus 269 l~~~l~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~--~~~~~~~~l~--~i~~~~g~~~~~----~~~ 326 (397)
+.+.|++ .|.+..+..|. ...+.++.|.+++. ....+.+.++ .....-|...+. .++
T Consensus 276 ~a~~L~~-~p~v~~V~~P~l~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~l~l~~~~~slG~~~sl~~~~~~~ 354 (403)
T PRK07503 276 VAEWLAR-HPAVELVHYPGLPSFAQHALAQRQMALPGGMIAFELKGGIAAGRRFMNALQLFARAVSLGDAESLAQHPASM 354 (403)
T ss_pred HHHHHHh-CCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEECCCHHHHHHHHHhCCcceeecccCCCCccCcCCCCC
Confidence 8888887 67654332111 12356778887631 1234444444 222233332221 111
Q ss_pred Ch----hhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHHHh
Q psy8850 327 EP----SYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKLRE 375 (397)
Q Consensus 327 ~~----~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 375 (397)
.+ ....+..|+.+ +.||||++. |++|.+++.|.++++...+
T Consensus 355 ~h~~~~~~~~~~~gi~~----~liR~svGl----E~~~dl~~dl~~Al~~~~~ 399 (403)
T PRK07503 355 THSTYTPEERAEHGISE----GLVRLSVGL----EDVADILADLAQALDACAV 399 (403)
T ss_pred ccccCCHHHHHhcCCCC----CeEEEEEec----CCHHHHHHHHHHHHHHHHH
Confidence 11 12234555554 899999997 5666677777776665543
No 190
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.95 E-value=2.4e-25 Score=207.78 Aligned_cols=298 Identities=12% Similarity=0.070 Sum_probs=200.3
Q ss_pred CCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHh----C---CCCCcEEEeCChhHHHHHHHHHh-Hh
Q psy8850 9 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLI----Y---ADPREIIWTSGATESNNLAIKGA-AH 80 (397)
Q Consensus 9 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~---~~~~~i~~~~g~t~a~~~~l~~l-~~ 80 (397)
.++.+++++.+.... . .|... ....++++++++++ | +++++|++|+|+++++..++..+ .
T Consensus 41 ~~~~~~~~~~~~~~~-~------~Y~~~----~G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~- 108 (364)
T PRK07865 41 VPPVIQEALAAAADA-P------GYPTT----AGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSKELVAWLPTLLGL- 108 (364)
T ss_pred CCHHHHHHHHHHHhh-C------CCCCc----cCCHHHHHHHHHHHHHHcCCCCCCcccEEEccChHHHHHHHHHHHcC-
Confidence 357777887665422 1 12211 22344555555554 4 55789999999999999887776 4
Q ss_pred hhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCccccccc---HHH
Q psy8850 81 FYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---ILE 157 (397)
Q Consensus 81 ~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~---l~~ 157 (397)
++||+|+++.|+|+.+...+..+ |.++..++ ++++++ .++++++++++++||||.+++ +++
T Consensus 109 ---~~gd~Vl~~~p~y~~~~~~~~~~---g~~~~~~~-------~~~~l~---~~~~~~v~~~~p~NPtG~~~~~~~~~~ 172 (364)
T PRK07865 109 ---GPGDVVVIPELAYPTYEVGARLA---GATVVRAD-------SLTELG---PQRPALIWLNSPSNPTGRVLGVDHLRK 172 (364)
T ss_pred ---CCCCEEEECCCCcccHHHHHHhc---CCEEEecC-------ChhhCC---cccceEEEEcCCCCCCCccCCHHHHHH
Confidence 68999999999999998887766 88888774 223332 257899999999999999998 467
Q ss_pred HHHHHHhcCcEEEEecccccCcc---ccc-cC------cccccEEEeccccccCCCC--ceEEEEecCCCCccccccccC
Q psy8850 158 IGELCRSKGVIFHCDAAQAVGKI---DIN-IQ------NYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGG 225 (397)
Q Consensus 158 i~~l~~~~gi~livD~a~~~~~~---~~~-~~------~~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~ 225 (397)
|+++|+++|++||+|++|+.... +.. +. ..+..+++.|++|.+|.+| +|+++.+++....+......
T Consensus 173 i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~i~~~~~~~~~~~~~~~~- 251 (364)
T PRK07865 173 VVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVAGDPALVAELLEVRKH- 251 (364)
T ss_pred HHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhccCCCceeeEEEecCHHHHHHHHHHHHh-
Confidence 88889999999999999883221 111 00 1134688999999665444 78888876655554432211
Q ss_pred CccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCChHH
Q psy8850 226 GHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGES 305 (397)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (397)
.....+.....++..+++. .+.+++.++.+.++++.+.+.|++ . ++.+..+++ +.++++.++ .+..+
T Consensus 252 ------~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~---~~~~~~~~~-~~~~~ 318 (364)
T PRK07865 252 ------AGMMVPAPVQAAMVAALGD-DAHVREQRERYARRRAVLRPALEA-A-GFRVDHSEA---GLYLWATRG-EDCWD 318 (364)
T ss_pred ------cCCCcCHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHH-c-CCcccCCCc---cEEEEEeCC-CCHHH
Confidence 0112333344444445543 234667788889999999999988 4 655544432 334555553 34456
Q ss_pred HHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHH
Q psy8850 306 LLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLK 367 (397)
Q Consensus 306 ~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~ 367 (397)
+.+.+. ||.+.+|..|.+ ...+++||+++. +++++++++++|+
T Consensus 319 ~~~~l~~~gv~v~pg~~f~~-----------------~~~~~iRi~~~~--~~~~~~~~~~~l~ 363 (364)
T PRK07865 319 TVAWLAERGILVAPGDFYGP-----------------AGAQHVRVALTA--TDERIAAAVERLA 363 (364)
T ss_pred HHHHHHHCCEEEeCccccCc-----------------CCCCEEEEEecC--CHHHHHHHHHHhh
Confidence 666665 999999865532 113789999985 6899999998885
No 191
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.95 E-value=1.1e-24 Score=203.94 Aligned_cols=338 Identities=14% Similarity=0.172 Sum_probs=216.7
Q ss_pred CCCCCC----CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHH
Q psy8850 2 DYSATT----PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKG 77 (397)
Q Consensus 2 ~~~~~~----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~ 77 (397)
|.+++. ..+|++++++.+++.++..+....... |.......++++.++++++.+ +.+++++|. .|+..++.+
T Consensus 2 ~f~s~dyLgl~~~~~~~~~~~~a~~~~g~~~~~sr~~--yg~~~~~~~LE~~lA~~~g~e-~al~~~sG~-~a~~~~i~~ 77 (392)
T PLN03227 2 NFATHDFLSTSSSPTLRQTALESLSHYGCGSCGPRGF--YGTIDAHLELEQCMAEFLGTE-SAILYSDGA-STTSSTVAA 77 (392)
T ss_pred CCcCcCccCCCCCHHHHHHHHHHHHHhCCCCcccccc--cCChHHHHHHHHHHHHHhCCC-cEEEecCcH-HHHHHHHHH
Confidence 445544 247899999999998744222221111 333458899999999999987 455555555 455577777
Q ss_pred hHhhhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhc-----------CCceEEEEeccc
Q psy8850 78 AAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKIC-----------SDTILVSVMLVN 146 (397)
Q Consensus 78 l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~-----------~~~~~v~~~~~~ 146 (397)
+. ++||+|+++++.|+++...+... +.+++.++.++. -+++.+.+.+. .++++|+++.++
T Consensus 78 l~----~~GD~Vl~~~~~h~s~~~~~~l~---~~~~~~~~~~d~--~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~ 148 (392)
T PLN03227 78 FA----KRGDLLVVDRGVNEALLVGVSLS---RANVRWFRHNDM--KDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLY 148 (392)
T ss_pred hC----CCCCEEEEeccccHHHHHHHHHc---CCeEEEeCCCCH--HHHHHHHHHhhhhccccccccCCCcEEEEEcCCc
Confidence 76 89999999999999998877544 677777776521 12333333432 358899999999
Q ss_pred CcccccccHHHHHHHHHhcCcEEEEecccccCccc---------cccC-cccccEEEeccccccCCCCceEEEEecCCCC
Q psy8850 147 NEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKID---------INIQ-NYKVDLMSFSAHKIYGPKGIGALYIRRNPRT 216 (397)
Q Consensus 147 ~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~---------~~~~-~~~~d~~~~s~~K~~g~~g~g~~~~~~~~~~ 216 (397)
|++|.+.|++++.++|++||+++|+|++|+++... +++. ..++|++++|++|.+|+.| |++.++++..+
T Consensus 149 ~~~G~i~~l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g~~g-g~v~~~~~~~~ 227 (392)
T PLN03227 149 KNTGTLAPLKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFGSVG-GMTVGSEEVVD 227 (392)
T ss_pred CCCCcccCHHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhhhccC-cEEecCHHHHH
Confidence 99999999999999999999999999999855321 1111 1256999999999777764 77777765443
Q ss_pred ccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCC-C------CCC
Q psy8850 217 RIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGD-M------NNR 289 (397)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-~------~~~ 289 (397)
.+.....+ ..+..+.++....+++ +++....+ .+++.+++.++.+++++.|++ .+.....+ + ...
T Consensus 228 ~~~~~~~~----~~~~~~~~p~~~~aa~-~al~~~~~-~~~~~~~l~~~~~~l~~~L~~--~~~~~~~~~rg~~~~~~~~ 299 (392)
T PLN03227 228 HQRLSGSG----YCFSASAPPFLAKADA-TATAGELA-GPQLLNRLHDSIANLYSTLTN--SSHPYALKLRNRLVITSDP 299 (392)
T ss_pred HHHHhCcC----ccccCCCCHHHHHHHH-HHHHHHhc-CHHHHHHHHHHHHHHHHHHHh--cCCccccccccccccCCCC
Confidence 33221111 1111112232333444 44543332 356788889999999999975 22221111 0 011
Q ss_pred CCceEEEEecCCC----------hHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHH
Q psy8850 290 IPHNLNISFNFIE----------GESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEK 357 (397)
Q Consensus 290 ~~~~~~~~~~~~~----------~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~ 357 (397)
.+.++.+.+.+.. ..++.+.+. |+.+.+...... ..+ .......||++++..+|++
T Consensus 300 ~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~~---------~~~---~~~P~~~iR~~~~~~~t~e 367 (392)
T PLN03227 300 ISPIIYLRLSDQEATRRTDETLILDQIAHHSLSEGVAVVSTGGHVK---------KFL---QLVPPPCLRVVANASHTRE 367 (392)
T ss_pred CCCEEEEEeCCHHHhhhhhhhhHHHHHHHHHHHCCCEEEecccccC---------CcC---CCCCCceEEEEecCCCCHH
Confidence 2445566664311 125555554 777653211000 000 0111377999999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q psy8850 358 EIDFTIKLLKMKVKKL 373 (397)
Q Consensus 358 ~i~~~~~~l~~~~~~~ 373 (397)
|||+++++|+++++++
T Consensus 368 ei~~~~~~l~~~~~~~ 383 (392)
T PLN03227 368 DIDKLLTVLGEAVEAI 383 (392)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999999776
No 192
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.95 E-value=1.6e-25 Score=209.21 Aligned_cols=307 Identities=14% Similarity=0.096 Sum_probs=206.0
Q ss_pred cchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHH-hhCCc
Q psy8850 33 HIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKL-ENDGF 111 (397)
Q Consensus 33 ~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~-~~~g~ 111 (397)
+.+++...+...++++.++++.|.+. .++++||++|+.+++.++. ++||+|+++.+.|+++...+... ...|+
T Consensus 53 ~~Y~r~~~p~~~~Le~~lA~~~g~~~--~i~~~sG~~Ai~~~l~all----~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi 126 (388)
T PRK07811 53 YEYARTGNPTRTALEEQLAALEGGAY--GRAFSSGMAATDCLLRAVL----RPGDHIVIPNDAYGGTFRLIDKVFTRWGV 126 (388)
T ss_pred CcccCCCCccHHHHHHHHHHHhCCCc--eEEeCCHHHHHHHHHHHHh----CCCCEEEEcCCCchHHHHHHHHhCcCCCe
Confidence 33444445678899999999999874 3455677899999999987 89999999999999877665543 33488
Q ss_pred EEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCccccccCcccccE
Q psy8850 112 RVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDL 191 (397)
Q Consensus 112 ~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~ 191 (397)
+++.++. .|++++++++++++++|++++++||+|.+.++++|+++|+++|+++|+|++++.+.....+ ..++|+
T Consensus 127 ~~~~~d~-----~d~e~l~~~i~~~tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD~a~a~~~~~~p~-~~gaDi 200 (388)
T PRK07811 127 EYTPVDL-----SDLDAVRAAITPRTKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVDNTFASPYLQQPL-ALGADV 200 (388)
T ss_pred EEEEeCC-----CCHHHHHHhcCcCCeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEECCCCccccCCch-hhCCcE
Confidence 8888775 3899999999999999999999999999999999999999999999999999876543222 347899
Q ss_pred EEeccccc-cCCCC--ceEEEEecCCC-CccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8850 192 MSFSAHKI-YGPKG--IGALYIRRNPR-TRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQK 267 (397)
Q Consensus 192 ~~~s~~K~-~g~~g--~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~ 267 (397)
+++|++|+ .|+.+ .|+++++++.. ..+....... ....+....+.....++ .+..+.++..+++.
T Consensus 201 vv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~~~~~-------g~~~s~~~a~l~~~~L~----tl~~R~~~~~~na~ 269 (388)
T PRK07811 201 VVHSTTKYIGGHSDVVGGALVTNDEELDEAFAFLQNGA-------GAVPGPFDAYLTLRGLK----TLAVRMDRHSENAE 269 (388)
T ss_pred EEecCceeecCCCCcEEEEEEECCHHHHHHHHHHHHhc-------CCCCCHHHHHHHHhccC----cHHHHHHHHHHHHH
Confidence 99999994 44433 48887764322 2222211110 01111111111112222 35566777888899
Q ss_pred HHHHHHhhhcCcEEEeCCCC--------------CCCCceEEEEecCC--ChHHHHHHhC--CcEecccCccCC----CC
Q psy8850 268 RLYNGLMESIEEIYINGDMN--------------NRIPHNLNISFNFI--EGESLLMAIK--DIAVSSGSACTS----AS 325 (397)
Q Consensus 268 ~l~~~l~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~--~~~~~~~~l~--~i~~~~g~~~~~----~~ 325 (397)
.+.+.|++ .|.+..+.-|. ...++++.|.+++. ...++.+.|+ .+...-|...+. ..
T Consensus 270 ~la~~L~~-~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~ 348 (388)
T PRK07811 270 AVAEFLAG-HPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLAGGEEAARDFCARTKVFTLAESLGGVESLIEHPSA 348 (388)
T ss_pred HHHHHHHh-CCCeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeCCCHHHHHHHHHhCCcceeeccCCCCcceEeCCcc
Confidence 99999988 77765332222 13467888888631 1345555555 344444443332 11
Q ss_pred CChhhH-HHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHH
Q psy8850 326 LEPSYV-LRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVK 371 (397)
Q Consensus 326 ~~~~~~-~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 371 (397)
+.+... .+..|+. .+.||||++. |+.+.+++.|.+++.
T Consensus 349 ~~~~~~~~~~~gi~----~~liR~svGl----E~~~dl~~dl~~al~ 387 (388)
T PRK07811 349 MTHASTAGSQLEVP----DDLVRLSVGI----EDVADLLADLEQALG 387 (388)
T ss_pred cCcccCCHhhcCCC----CCEEEEEeCC----CCHHHHHHHHHHHhh
Confidence 111111 1233444 3899999997 566677777776654
No 193
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.95 E-value=3.9e-25 Score=211.24 Aligned_cols=257 Identities=18% Similarity=0.211 Sum_probs=193.6
Q ss_pred cchhhhHHHHHHHHHHHHHHHhCCCC-------------CcEEEeCChhHHHHHHHHHhHhhhc----------------
Q psy8850 33 HIYGWTAEKAIEKARNEVAQLIYADP-------------REIIWTSGATESNNLAIKGAAHFYK---------------- 83 (397)
Q Consensus 33 ~~~~~~~~~~~~~~~~~la~~~~~~~-------------~~i~~~~g~t~a~~~~l~~l~~~~~---------------- 83 (397)
+..++...+....+-++++++++..+ ...++|+|||+|+..++.+......
T Consensus 121 ~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~ 200 (522)
T TIGR03799 121 IETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFA 200 (522)
T ss_pred eecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchh
Confidence 44455666788889999999985211 2378999999999998887664321
Q ss_pred ------cCCCEEEEcCCCChhhHHHHHHHhhCCc---EEEEeccCCCCCCCHHHHHHHhc----CCce--EEEEecccCc
Q psy8850 84 ------KRGKHIITVQTEHKSVLDSIRKLENDGF---RVTYLKPKNNGLITLSQLEEKIC----SDTI--LVSVMLVNNE 148 (397)
Q Consensus 84 ------~~g~~vl~~~~~~~s~~~~~~~~~~~g~---~v~~v~~~~~~~~d~~~l~~~i~----~~~~--~v~~~~~~~~ 148 (397)
.++.+|++++.+|+|..++...+ |+ +++.||++++|.+|+++|+++|. ++++ +|+.+..++.
T Consensus 201 ~~~~~~~~~~~v~~S~~~H~S~~kaa~~l---glg~~~v~~vp~d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~ 277 (522)
T TIGR03799 201 ALKHYGYDGLAILVSERGHYSLGKAADVL---GIGRDNLIAIKTDANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTE 277 (522)
T ss_pred hhhhccCCceEEEECCCchHHHHHHHHHc---CCCcccEEEEEeCCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcC
Confidence 12468999999999999888877 55 79999999999999999999986 3444 4444566789
Q ss_pred ccccccHHHHHHHHHhcCcEEEEecccccCccccc-----cCcc-cccEEEecccc-ccCCCCceEEEEecCCC-Ccccc
Q psy8850 149 IGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDIN-----IQNY-KVDLMSFSAHK-IYGPKGIGALYIRRNPR-TRIEA 220 (397)
Q Consensus 149 tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~-----~~~~-~~d~~~~s~~K-~~g~~g~g~~~~~~~~~-~~~~~ 220 (397)
+|.+.|+++|+++|+++|+++|+|++++.+....+ +..+ ++|++++|+|| +++|.|+|++++++... ..+..
T Consensus 278 tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~P~g~G~llvr~~~~~~~~~~ 357 (522)
T TIGR03799 278 TGNIDPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVPMGAGMVLFKDPALMSAIEH 357 (522)
T ss_pred CCCcCCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCcCcccEEEEEeCHHHHHHhcc
Confidence 99999999999999999999999999997665433 3433 78999999999 88999999999986422 22221
Q ss_pred ---ccc--cCC--ccccccCCCCchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCc
Q psy8850 221 ---QIH--GGG--HEYGLRSGTLATHQIVGMGEAFRLAR-IEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPH 292 (397)
Q Consensus 221 ---~~~--~~~--~~~~~~~~~~~~~~~~~l~~al~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 292 (397)
++. +.. ...++. ++.+... +.++.+++.+. .+++++.++..++++++.+.|++ .+++.++.++. ..
T Consensus 358 ~~~Yl~~~~~~d~~~~~le-gsR~~~a-l~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~-~~~~el~~~p~---l~ 431 (522)
T TIGR03799 358 HAEYILRKGSKDLGSHTLE-GSRPGMA-MLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQ-QPDFELVTEPE---LC 431 (522)
T ss_pred CcchhcCCCCCccccceee-cCcchHH-HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhh-CCCeEEecCCC---cc
Confidence 111 110 112344 3344333 45778888774 58999999999999999999998 89999998754 45
Q ss_pred eEEEEe
Q psy8850 293 NLNISF 298 (397)
Q Consensus 293 ~~~~~~ 298 (397)
+++|.+
T Consensus 432 iv~Fr~ 437 (522)
T TIGR03799 432 LLTYRY 437 (522)
T ss_pred EEEEEE
Confidence 666665
No 194
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.95 E-value=8.8e-26 Score=210.28 Aligned_cols=307 Identities=13% Similarity=0.080 Sum_probs=209.5
Q ss_pred cchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHHhhCCcE
Q psy8850 33 HIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFR 112 (397)
Q Consensus 33 ~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~ 112 (397)
+.+++...+...++++.+++++|.+ ++++++||+.|+..++.++. ++||+|+++.+.|+++...+..+...|++
T Consensus 45 ~~y~r~~np~~~~lE~~lA~l~g~~--~~l~~~sG~~Ai~~~l~~ll----~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~ 118 (385)
T PRK08574 45 LKYSREENPTLRPLEEALAKLEGGV--DALAFNSGMAAISTLFFSLL----KAGDRVVLPMEAYGTTLRLLKSLEKFGVK 118 (385)
T ss_pred ceEECCCCccHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHHh----CCCCEEEEcCCCchhHHHHHHHhhccCcE
Confidence 4445555677889999999999975 67788999999999998887 79999999999999998887665445888
Q ss_pred EEEeccCCCCCCCHHHHHHHhcC-CceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCccccccCcccccE
Q psy8850 113 VTYLKPKNNGLITLSQLEEKICS-DTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDL 191 (397)
Q Consensus 113 v~~v~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~ 191 (397)
++.++ +|++++++++++ ++++|++++++||+|.+.|+++|+++||++|+++++|++++.+.....+ ..++|+
T Consensus 119 v~~~~------~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD~t~a~~~~~~~l-~~GaDi 191 (385)
T PRK08574 119 VVLAY------PSTEDIIEAIKEGRTKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVDNTFATPLLYRPL-RHGADF 191 (385)
T ss_pred EEEEC------CCHHHHHHhcCccCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccCChh-hhCCcE
Confidence 87764 368999999998 8999999999999999999999999999999999999999876542222 357899
Q ss_pred EEecccc-ccCCCC--ceEEEEe-cCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8850 192 MSFSAHK-IYGPKG--IGALYIR-RNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQK 267 (397)
Q Consensus 192 ~~~s~~K-~~g~~g--~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~ 267 (397)
+++|++| +.|+.. .|+++++ ++..+.+..... ......+....+.+...++ .+..+.++..+++.
T Consensus 192 vv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~~-------~~g~~~~p~~a~l~l~~l~----tL~~R~~~~~~na~ 260 (385)
T PRK08574 192 VVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWRR-------RLGTIMQPFEAYLVLRGLK----TLEVRFERQCRNAM 260 (385)
T ss_pred EEeeCceeecCCCCceeEEEEECcHHHHHHHHHHHH-------hcCCCCCHHHHHHHHcccC----cHHHHHHHHHHHHH
Confidence 9999999 555432 3655554 333333322111 0011222222222223333 24556677777888
Q ss_pred HHHHHHhhhcCcEEEeCCCC----------------CCCCceEEEEecCC--ChHHHHHHhC--CcEecccCccCC----
Q psy8850 268 RLYNGLMESIEEIYINGDMN----------------NRIPHNLNISFNFI--EGESLLMAIK--DIAVSSGSACTS---- 323 (397)
Q Consensus 268 ~l~~~l~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~--~~~~~~~~l~--~i~~~~g~~~~~---- 323 (397)
++.+.|++ .|.+..+.-|. ...++++.|.+++. ...++.+.|+ .+...-|...+.
T Consensus 261 ~la~~L~~-~p~v~~V~yP~l~~~~~~~~~~~~~~~~g~g~~~s~~l~~~~~~~~~~~~~l~l~~~~~s~G~~~sl~~~~ 339 (385)
T PRK08574 261 AIAEFLSE-HPKVAEVYYPGLPSDPYHGVAKRLFGKDLYGGVVSFRVKGGRDAVLKFLRSLKLIKPSPSLGGVESLATYP 339 (385)
T ss_pred HHHHHHHc-CCCcCEEECCCCCCCchHHHHHHhCCCCCcceEEEEEeCCCHHHHHHHHHcCCcceEccCCCCCcceeeCC
Confidence 88889987 77654332211 12467888888631 1345555555 344444544332
Q ss_pred CCCCh----hhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHH
Q psy8850 324 ASLEP----SYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKK 372 (397)
Q Consensus 324 ~~~~~----~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 372 (397)
..+.+ ....+..|+.+ +.||||++. |+.|.+++.|.+++++
T Consensus 340 ~~~~~~~~~~~~~~~~gi~~----~liR~svGl----E~~~dli~dl~~al~~ 384 (385)
T PRK08574 340 VKSAASPIPEEDRKALGITE----DLVRLSVGL----EDVEDLIEDLDQALGS 384 (385)
T ss_pred CcCCcccCCHHHHHhcCCCC----CeEEEEecc----CCHHHHHHHHHHHHhc
Confidence 12211 12234556554 899999997 6677777777777653
No 195
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.95 E-value=3.3e-26 Score=211.88 Aligned_cols=308 Identities=18% Similarity=0.130 Sum_probs=203.1
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCC
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGK 87 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~ 87 (397)
.+|+.+++++.+..... . .+.......++++.+++++| ++++++++||++|+.+++.++. ++|+
T Consensus 9 ~~~~~v~~a~~~~~~~~--------~--~~~~~~~~~~l~~~~a~~~g--~~~~~~~~~gt~a~~~~~~~l~----~~gd 72 (338)
T cd06502 9 GPTPEMLEAMAAANVGD--------D--VYGEDPTTAKLEARAAELFG--KEAALFVPSGTAANQLALAAHT----QPGG 72 (338)
T ss_pred CCCHHHHHHHHhcccCC--------c--ccCCCHHHHHHHHHHHHHhC--CCeEEEecCchHHHHHHHHHhc----CCCC
Confidence 47889999998765321 0 11123467889999999999 4578899999999999999887 7899
Q ss_pred EEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcC-------CceEEEEecccCcccc--cccHHHH
Q psy8850 88 HIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS-------DTILVSVMLVNNEIGV--IQPILEI 158 (397)
Q Consensus 88 ~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~-------~~~~v~~~~~~~~tG~--~~~l~~i 158 (397)
+|++++++|.+...........|.+++.++.+. +.+|++++++++++ ++++|++++++|++|. ..++++|
T Consensus 73 ~v~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~g~~~~~~~l~~i 151 (338)
T cd06502 73 SVICHETAHIYTDEAGAPEFLSGVKLLPVPGEN-GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEGGTVYPLDELKAI 151 (338)
T ss_pred eEEEecCcceeeecCCcHHHHcCceEEeecCCC-CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCCccccCHHHHHHH
Confidence 999999999876543211111399999999865 67999999999975 7899999999997443 2346789
Q ss_pred HHHHHhcCcEEEEecccccCc-----cccccCcccccEEEeccccccCCCCceEEEEecCCCCccccccccCCccccccC
Q psy8850 159 GELCRSKGVIFHCDAAQAVGK-----IDINIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRS 233 (397)
Q Consensus 159 ~~l~~~~gi~livD~a~~~~~-----~~~~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (397)
+++|++||+++|+|++|..+. .+......++|+++.|+||++|.+|.++++.+++..+.+.......+ . .
T Consensus 152 ~~~~~~~~~~livDea~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~g~~~~~~~~~~~~~~~~~~~~~----~-~ 226 (338)
T cd06502 152 SALAKENGLPLHLDGARLANAAAALGVALKTYKSGVDSVSFCLSKGGGAPVGAVVVGNRDFIARARRRRKQAG----G-G 226 (338)
T ss_pred HHHHHHcCCeEeechHHHHHHHHhcCCCHHHHHhcCCEEEEeccccCCCccceEEECCHHHHHHHHHHHHHhC----C-C
Confidence 999999999999999875321 11111123678999999997665554555566665555543321100 0 0
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCC--hHHHHHHh-
Q psy8850 234 GTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIE--GESLLMAI- 310 (397)
Q Consensus 234 ~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l- 310 (397)
...+.....+...+++. .++.++.+++.++++++.+.|++ ++ +.+... ..+++.+.++... ...+.+.+
T Consensus 227 ~~~~~~~~~a~~~~L~~--~~~~~~~~~~~~~~~~l~~~L~~-~~-~~~~~~----~~~~~~v~~~~~~~~~~~l~~~l~ 298 (338)
T cd06502 227 MRQSGFLAAAGLAALEN--DLWLRRLRHDHEMARRLAEALEE-LG-GLESEV----QTNIVLLDPVEANAVFVELSKEAI 298 (338)
T ss_pred hhhHHHHHHHHHHHhcC--chHHHHHHHHHHHHHHHHHHHHh-cC-CCcccc----cCCeEEEecCCccHHHHHHHHHHH
Confidence 01111222222233331 23456668888889999999988 53 332221 1445555554211 12333332
Q ss_pred ---C-CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHH
Q psy8850 311 ---K-DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 368 (397)
Q Consensus 311 ---~-~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~ 368 (397)
. |+.+.+. ..++||++++..++++|++++++++++
T Consensus 299 ~~~~~gi~~~~~-----------------------~~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 299 ERRGEGVLFYAW-----------------------GEGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred HhhhCCEEEEec-----------------------CCCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 1 4444321 127899999999999999999999865
No 196
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.95 E-value=8.3e-25 Score=198.34 Aligned_cols=333 Identities=14% Similarity=0.067 Sum_probs=236.8
Q ss_pred CCCCCCCCHHHHHHHHHHHhhccCC--CCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCc--EEEeCChhHHHHHHHHHh
Q psy8850 3 YSATTPIDPRVVDKMIPYLRVQFGN--PASRNHIYGWTAEKAIEKARNEVAQLIYADPRE--IIWTSGATESNNLAIKGA 78 (397)
Q Consensus 3 ~~~~~~~~~~v~~a~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~--i~~~~g~t~a~~~~l~~l 78 (397)
.++++..|++|++++++.+..+.+. ..-..+..+..+.+.+.++++.++++++.|.+. ++++.|||.+++++...+
T Consensus 9 ~aGPa~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~ea~~~Nl 88 (364)
T PRK12462 9 SGGPGALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFSMIPMNF 88 (364)
T ss_pred cCCCcCCCHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeccHHHHHHHHHHHc
Confidence 4677788999999999888764431 111133345677899999999999999996543 556667999999999999
Q ss_pred HhhhccCCCEEE-EcCCCChhhHHHHHHHhhCCcEEEEeccC----CCCCCCHHHHHHHhcCCceEEEEecccCcccccc
Q psy8850 79 AHFYKKRGKHII-TVQTEHKSVLDSIRKLENDGFRVTYLKPK----NNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQ 153 (397)
Q Consensus 79 ~~~~~~~g~~vl-~~~~~~~s~~~~~~~~~~~g~~v~~v~~~----~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~ 153 (397)
+ .+|++++ +....+.+... .+.+++.| ++..+... ....++++++ .+.++.++|++++..+.+|+..
T Consensus 89 l----~~g~~~~~~~~tG~fg~r~-~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~--~~~~d~~~v~~t~NETstGv~~ 160 (364)
T PRK12462 89 S----RPGAAAPEYVTTGYWSRKA-IGEASRVA-AMRVVWDGAASGYRTLPSLAEL--DWDARAPFRHYVSNETVEGLQF 160 (364)
T ss_pred C----CCCCcEEEEEeCCHHHHHH-HHHHHhcC-CceEecCcCCCCCCcCCCHHHh--ccCCCCcEEEEccCCCCceEec
Confidence 8 6778554 44444545433 34444545 44444321 1233455555 3445688999999999999999
Q ss_pred cHHHHHHHHHhcCcEEEEecccccCccccccCcccccEEEeccccccCCCCceEEEEecCCCCccccccccCCc-----c
Q psy8850 154 PILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGH-----E 228 (397)
Q Consensus 154 ~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~~~~~~~~~~-----~ 228 (397)
| ++.+.+++++|+|.+++++..++++..+ |+++.+.+|.+||+|+++++++++++++..+..+.... .
T Consensus 161 ~-----~~~~~~~~llvvD~sS~~~s~pid~~~~--dvi~agsQKnlgP~Gltvvivs~~al~~~~~~~p~~ldy~~~~~ 233 (364)
T PRK12462 161 P-----DAAGLPDSPLIADMSSDFMSRPFDVEAY--GMVYAHAQKNLGPAGVTVAIIRRALLERVPDTLPPMLDFRTHVE 233 (364)
T ss_pred C-----cccccCCCeEEEEcCchhhCCCCChHHc--cEEEeeccccCCCCceEEEEECHHHHhhccccCCchhhHHHHHh
Confidence 7 3344469999999999999999999865 99999999966799999999999887765443221100 1
Q ss_pred ccccCCCCchhHHHHHHHHHHHHH-H--HHHHHHHHHHHHHHHHHHHHhhhcCcEEEeC-CCCCCCCceEEEEecCCC-h
Q psy8850 229 YGLRSGTLATHQIVGMGEAFRLAR-I--EMKEELKRILFLQKRLYNGLMESIEEIYING-DMNNRIPHNLNISFNFIE-G 303 (397)
Q Consensus 229 ~~~~~~~~~~~~~~~l~~al~~~~-~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~ 303 (397)
......||++..++++..+++++. + |++.+.++.+++++.+++.+++ ++++.... .+..+....+.|.+.+.. .
T Consensus 234 ~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~-~~~~~~~~~~~~~RS~mnv~f~~~~~~l~ 312 (364)
T PRK12462 234 HRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDA-LNEVIDCHAHRAARSTMNVAFRFRQPRLD 312 (364)
T ss_pred cCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHh-CCCcccCCCChhhcCcceEEEEcCCHHHH
Confidence 223456999999999999999984 5 7999999999999999999999 77665443 333343333333333221 2
Q ss_pred HHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHH
Q psy8850 304 ESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKK 372 (397)
Q Consensus 304 ~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 372 (397)
.+|.+... |+..-.|. ...+.+|+|+.+.++.++++.+++.|+++.++
T Consensus 313 ~~f~~~a~~~gl~~lkGh---------------------r~vgg~Ras~yna~~~e~v~~L~~fm~~f~~~ 362 (364)
T PRK12462 313 TLFKEQSTEAGFCGLSGH---------------------RSIGGIRASLYNAVSEQAVSRLCAFLKDFAIR 362 (364)
T ss_pred HHHHHHHHHCCCccccCC---------------------cccCceEEEcCCCCCHHHHHHHHHHHHHHHHh
Confidence 34444443 55444442 22366999999999999999999999998765
No 197
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.95 E-value=1.6e-25 Score=209.59 Aligned_cols=303 Identities=15% Similarity=0.124 Sum_probs=208.9
Q ss_pred hhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHH-HhhCCcEEE
Q psy8850 36 GWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRK-LENDGFRVT 114 (397)
Q Consensus 36 ~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~-~~~~g~~v~ 114 (397)
++...+...++++.++++.|.+ +.++++||+.|+..++.++. ++||+|+++...|+.+...... +...|.+++
T Consensus 65 ~r~~~p~~~~le~~lA~l~g~~--~al~~~sG~~Ai~~~l~all----~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~ 138 (403)
T PRK07810 65 SRYGNPTVSMFEERLRLIEGAE--ACFATASGMSAVFTALGALL----GAGDRLVAARSLFGSCFVVCNEILPRWGVETV 138 (403)
T ss_pred eCCCCchHHHHHHHHHHHhCCC--cEEEECChHHHHHHHHHHHh----CCCCEEEEccCCcchHHHHHHHHHHHcCcEEE
Confidence 3344456889999999999976 68888999999999988887 7999999999888776655543 344599999
Q ss_pred EeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCccccccCcccccEEEe
Q psy8850 115 YLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSF 194 (397)
Q Consensus 115 ~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~~ 194 (397)
.++.+ |++++++++++++++|++++|+||+|.+.|+++|+++|+++|+++++|++++.+..... ...++|++++
T Consensus 139 ~vd~~-----d~~~l~~ai~~~tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD~a~a~~~~~~~-~~~gaDivv~ 212 (403)
T PRK07810 139 FVDGE-----DLSQWEEALSVPTQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLDNVFATPLLQRG-LPLGADVVVY 212 (403)
T ss_pred EECCC-----CHHHHHHhcCcCceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCCccccCCh-hhcCCcEEEc
Confidence 99754 89999999999999999999999999999999999999999999999999986654322 2448999999
Q ss_pred ccccccCCCC---ceEEEEecCCCC-ccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8850 195 SAHKIYGPKG---IGALYIRRNPRT-RIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLY 270 (397)
Q Consensus 195 s~~K~~g~~g---~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~ 270 (397)
|++|++++.| .|+++.+++... .+...... ....++....+.+...++ .+..+.++..+++.++.
T Consensus 213 S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~~~~~-------~g~~~s~~~a~l~l~~L~----tl~~R~~~~~~~a~~~a 281 (403)
T PRK07810 213 SGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRH-------TGPALSAFNAWVLLKGLE----TLALRVRHSNASALRIA 281 (403)
T ss_pred cCCceecCCcCceeEEEEeChHHHHHHHHHHHHH-------hCCCCCHHHHHHHHhccC----cHHHHHHHHHHHHHHHH
Confidence 9999555444 488887765332 22221111 111233333333333444 34556777788888888
Q ss_pred HHHhhhcCcEEEeCCCC--------------CCCCceEEEEecCC---C---hHHHHHHhC--CcEecccCccC----CC
Q psy8850 271 NGLMESIEEIYINGDMN--------------NRIPHNLNISFNFI---E---GESLLMAIK--DIAVSSGSACT----SA 324 (397)
Q Consensus 271 ~~l~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~---~---~~~~~~~l~--~i~~~~g~~~~----~~ 324 (397)
+.|++ .|.+..+.-|. ...++++.|.+++. . ..++.+.|+ .+...-|...+ |.
T Consensus 282 ~~L~~-~p~v~~V~yP~l~~~p~~~~~~~~~~g~g~~~s~~l~~~~~~~~~~~~~f~~~l~l~~~~~slG~~~sl~~~p~ 360 (403)
T PRK07810 282 EFLEG-HPAVRWVRYPFLPSHPQYDLAKRQMSGGGTVVTFELDAPEDAAKKRAFEVLDKLRVIDISNNLGDAKSLITHPA 360 (403)
T ss_pred HHHhc-CCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCCCCcCHHHHHHHHHhCCceEEeccCCCCcceeeCCC
Confidence 88888 77765443211 13356788888641 1 245666665 33444443332 22
Q ss_pred CCCh----hhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHH
Q psy8850 325 SLEP----SYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKV 370 (397)
Q Consensus 325 ~~~~----~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~ 370 (397)
.+.+ .......|+.+ +.+|||++. |+++.+++.|.+++
T Consensus 361 ~~~h~~~~~~~~~~~gi~~----~lvR~svGl----E~~~dli~dl~~Al 402 (403)
T PRK07810 361 TTTHRAMGPEGRAAIGLGD----GVVRLSVGL----EDTDDLIADLDRAL 402 (403)
T ss_pred ccccccCCHHHHHhcCCCC----CeEEEEecc----CCHHHHHHHHHHhh
Confidence 2111 12233556554 899999997 66777777777654
No 198
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.95 E-value=5.2e-25 Score=200.45 Aligned_cols=314 Identities=19% Similarity=0.161 Sum_probs=229.9
Q ss_pred CHHHHHHHHHHHhhcc-CCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCE
Q psy8850 10 DPRVVDKMIPYLRVQF-GNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKH 88 (397)
Q Consensus 10 ~~~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~ 88 (397)
+|.+++++.+.+..+. +-+. ...-....+...++++.|++++|.+ ..++.+||-.|+..++.++. +++|.
T Consensus 55 ~~~~~~a~~~~~~~~g~g~~g---sR~i~G~~~~h~~LE~~lA~f~g~e--~al~f~SGy~AN~~~i~~l~----~~~dl 125 (388)
T COG0156 55 HPELIEAAKAAIRRYGVGAGG---SRLISGTSDLHVELEEELADFLGAE--AALLFSSGFVANLGLLSALL----KKGDL 125 (388)
T ss_pred CHHHHHHHHHHHHHhCCCCCC---cCcccCCcHHHHHHHHHHHHHhCCC--cEEEEcccchhHHHHHHHhc----CCCcE
Confidence 6789999999998843 2222 2222344678999999999999998 34444555579999999998 78999
Q ss_pred EEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcC------CceEEEEecccCcccccccHHHHHHHH
Q psy8850 89 IITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS------DTILVSVMLVNNEIGVIQPILEIGELC 162 (397)
Q Consensus 89 vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~------~~~~v~~~~~~~~tG~~~~l~~i~~l~ 162 (397)
|+.....|.|....++.. +.+++.+..+ |+++||+.+.+ +.++|+++.+.++.|.+.|+++|++++
T Consensus 126 i~~D~lnHASiidG~rls---~a~~~~f~Hn-----D~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiApL~~l~~L~ 197 (388)
T COG0156 126 IFSDELNHASIIDGIRLS---RAEVRRFKHN-----DLDHLEALLEEARENGARRKLIVTEGVFSMDGDIAPLPELVELA 197 (388)
T ss_pred EEEechhhhhHHHHHHhC---CCcEEEecCC-----CHHHHHHHHHhhhccCCCceEEEEeccccCCCCcCCHHHHHHHH
Confidence 999999999999888876 8888888765 89999999976 368999999999999999999999999
Q ss_pred HhcCcEEEEecccccCcccc---------ccCcccccEEEeccccccCCCCceEEEEecCCCCccccccccCCccccccC
Q psy8850 163 RSKGVIFHCDAAQAVGKIDI---------NIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRS 233 (397)
Q Consensus 163 ~~~gi~livD~a~~~~~~~~---------~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (397)
++||+++++|++|+.|..-. .+..-.+|++++|++|.+|..| |++.++....+.+...... .-| +
T Consensus 198 ~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~G-g~v~g~~~~~d~L~~~ar~----~if-S 271 (388)
T COG0156 198 EKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGSSG-GYIAGSAALIDYLRNRARP----FIF-S 271 (388)
T ss_pred HHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcccC-ceeeCcHHHHHHHHHhCCc----eec-c
Confidence 99999999999999776532 2222246899999999878765 8988887665554333211 112 2
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecC-CChHHHHHHhC-
Q psy8850 234 GTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF-IEGESLLMAIK- 311 (397)
Q Consensus 234 ~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~- 311 (397)
..++....++..++++.+.+ ...+++++.++..++++.+.. .++.+.... ..++.+.+.+ ....++...|.
T Consensus 272 talpP~~aaa~~~al~~l~~-~~~~r~~L~~~~~~~~~~~~~--~~~~~~~s~----s~I~pv~~gd~~~a~~~s~~l~~ 344 (388)
T COG0156 272 TALPPAVAAAALAALRILEE-GPERRERLQELAAFFRSLLKA--LGLVLLPSE----SPIIPVILGDEERALEASRALLE 344 (388)
T ss_pred CCCCHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHh--cCCccCCCC----CCeeeeEeCCHHHHHHHHHHHHH
Confidence 24445555666688887764 367788888889998866655 454443222 3454555543 23445555555
Q ss_pred -CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHH
Q psy8850 312 -DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (397)
Q Consensus 312 -~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 369 (397)
||.+.+-.... .+.+...||++++..+|++||++++++|.++
T Consensus 345 ~Gi~v~~i~~PT----------------Vp~gtarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 345 EGIYVSAIRPPT----------------VPKGTARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred CCeeEeeecCCC----------------CCCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 66666432221 2344578999999999999999999999864
No 199
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.95 E-value=6.3e-25 Score=206.09 Aligned_cols=283 Identities=23% Similarity=0.269 Sum_probs=222.3
Q ss_pred CCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCC-cEEEeCChhHHHHHHHHHhHhhhcc
Q psy8850 6 TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPR-EIIWTSGATESNNLAIKGAAHFYKK 84 (397)
Q Consensus 6 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~-~i~~~~g~t~a~~~~l~~l~~~~~~ 84 (397)
++.+++...+++...+....++++. .+.......++-.+++++++.+.+ ...+|+|||+|+.+++.+....+.+
T Consensus 71 ~~~~~~~a~~~~~~~~~~nl~d~~~-----~p~a~~~E~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~ 145 (460)
T COG0076 71 PTRVPPVAAELLVSALNKNLGDPDE-----SPAAAELEERVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRK 145 (460)
T ss_pred CCCCHHHHHHHHHHHHhhcCCCccc-----ChhHHHHHHHHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHH
Confidence 4456778888888888876665544 335567788899999999999633 5999999999999999987765521
Q ss_pred -C---------CCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCC-CCCCCHHHHHHHhcCCceE--EEEecccCcccc
Q psy8850 85 -R---------GKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN-NGLITLSQLEEKICSDTIL--VSVMLVNNEIGV 151 (397)
Q Consensus 85 -~---------g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~-~~~~d~~~l~~~i~~~~~~--v~~~~~~~~tG~ 151 (397)
. ..+|+++...|.|+.+++..+ |+....++.++ +..+|+++++++|.+++.. |+.+.+++++|.
T Consensus 146 ~~~~~~~~~~~~P~ii~s~~aH~s~~Kaa~~l---G~~~~~v~~~~~~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~ 222 (460)
T COG0076 146 RALAESGKPGGKPNIVCSETAHFSFEKAARYL---GLGLRRVPTVPTDYRIDVDALEEAIDENTIGGVVVGTAGTTDTGS 222 (460)
T ss_pred HhhhcccccCCCCeEEecCcchhHHHHHHHHh---CCCceeEEeccCccccCHHHHHHHHHhhccCceEEEEecCCCCCc
Confidence 1 237999999999999999999 99999999987 7899999999999998887 999999999999
Q ss_pred cccHHHHHHHHHhcCcEEEEecccccCcccc-------ccCcccccEEEecccc-ccCCCCceEEEEecC-CCCcc---c
Q psy8850 152 IQPILEIGELCRSKGVIFHCDAAQAVGKIDI-------NIQNYKVDLMSFSAHK-IYGPKGIGALYIRRN-PRTRI---E 219 (397)
Q Consensus 152 ~~~l~~i~~l~~~~gi~livD~a~~~~~~~~-------~~~~~~~d~~~~s~~K-~~g~~g~g~~~~~~~-~~~~~---~ 219 (397)
+.|+++|.++|+++++++|||+|++....++ ++..-++|+++.++|| .+.|.|+|+++.+++ ...+. .
T Consensus 223 iDdi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g~aP~~~G~il~rd~e~l~~~~~~~ 302 (460)
T COG0076 223 IDDIEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGVDSITVDGHKYGLAPIGCGVVLFRDEEALRRILIFA 302 (460)
T ss_pred cCCHHHHHHHHHHcCCcEEEEccccceeecccCccchhhcCCCCceEEEECcccccCCCCCceEEEEECHHHhhhhhhcc
Confidence 9999999999999999999999999666533 2222379999999999 678999999999987 33332 1
Q ss_pred cccccC-CccccccCCCCchhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEE
Q psy8850 220 AQIHGG-GHEYGLRSGTLATHQIVGMGEAFRLA-RIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNIS 297 (397)
Q Consensus 220 ~~~~~~-~~~~~~~~~~~~~~~~~~l~~al~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 297 (397)
..+.++ .....-..++.+....+++...+..+ .+|+.++.++..++++++.+.|++ .+.+.+..++. ...+.|.
T Consensus 303 ~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~-~~~~e~~~~p~---l~~V~fr 378 (460)
T COG0076 303 DYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEK-LGDFELVNEPE---LPIVAFR 378 (460)
T ss_pred cccCCCCCcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHh-CCCcEeecCCc---cceEEEE
Confidence 222222 11122223444455677777777777 689999999999999999999999 77799888764 4566666
Q ss_pred ecC
Q psy8850 298 FNF 300 (397)
Q Consensus 298 ~~~ 300 (397)
.++
T Consensus 379 ~~~ 381 (460)
T COG0076 379 LKD 381 (460)
T ss_pred cCC
Confidence 643
No 200
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.95 E-value=3.7e-25 Score=210.14 Aligned_cols=289 Identities=14% Similarity=0.130 Sum_probs=192.5
Q ss_pred cEEEeCChhHHHHHHHHHhHh-hhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCC--C-----CCCCHHHHHH
Q psy8850 60 EIIWTSGATESNNLAIKGAAH-FYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN--N-----GLITLSQLEE 131 (397)
Q Consensus 60 ~i~~~~g~t~a~~~~l~~l~~-~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~--~-----~~~d~~~l~~ 131 (397)
+|++|+|+++|+..++.++.. ...++||+|++..|.|+.+....... ..|.+++.++.+. . +.+|.+++++
T Consensus 157 ~V~it~Gat~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~-~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~ 235 (521)
T TIGR03801 157 DLFAVEGGTAAMCYIFDSLKANELLKKGDKIALMTPIFTPYLEIPELP-RYDFEVVRIKADEMTEDGTHTWQYPDKELEK 235 (521)
T ss_pred eEEEeCCHHHHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHHHh-cCCcEEEEeecccccccccccCCCCHHHHHH
Confidence 799999999999998887321 11289999999999999988776543 3377888887753 2 6789999999
Q ss_pred HhcCCceEEEEecccCccccccc---HHHHHHHHHhc--CcEEEEecccccCcc-ccccCc--ccccEEEeccccccCCC
Q psy8850 132 KICSDTILVSVMLVNNEIGVIQP---ILEIGELCRSK--GVIFHCDAAQAVGKI-DINIQN--YKVDLMSFSAHKIYGPK 203 (397)
Q Consensus 132 ~i~~~~~~v~~~~~~~~tG~~~~---l~~i~~l~~~~--gi~livD~a~~~~~~-~~~~~~--~~~d~~~~s~~K~~g~~ 203 (397)
+++++++++++++|+||||.+++ +++|+++|++| +++||+|++|+.... ..++.. .+..+++.|++|.+|.+
T Consensus 236 ~~~~~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~sl~~~~~~~vI~v~SfSK~fg~~ 315 (521)
T TIGR03801 236 LRDPSIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDDFRSLFAELPYNTIGVYSFSKYFGAT 315 (521)
T ss_pred hcCCCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcccccchhhhCCCCEEEEEcchhhccCc
Confidence 99899999999999999999999 56778889986 999999999973221 111111 13568899999977655
Q ss_pred C--ceEEEEecC-----CCCcc----cccc---------------------ccCC-ccccccCCCCchhHHH-----HHH
Q psy8850 204 G--IGALYIRRN-----PRTRI----EAQI---------------------HGGG-HEYGLRSGTLATHQIV-----GMG 245 (397)
Q Consensus 204 g--~g~~~~~~~-----~~~~~----~~~~---------------------~~~~-~~~~~~~~~~~~~~~~-----~l~ 245 (397)
| +|+++++++ .+..+ ...+ .... .......| .+.++.. ++.
T Consensus 316 G~RlG~i~~~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g-~s~p~Q~q~al~a~~ 394 (521)
T TIGR03801 316 GWRLGTIALHKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAG-LSTPQQVQMALFSLF 394 (521)
T ss_pred hhhhhhhhcCchHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCC-CCcHHHHHHHHHHHH
Confidence 6 799888754 11111 0000 0000 00011122 2333322 333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecC-----------------CChHHHHH
Q psy8850 246 EAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF-----------------IEGESLLM 308 (397)
Q Consensus 246 ~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~ 308 (397)
++++......++..+.++++++.+.+.| . + .+... ++. ....+.+.++. .++.++..
T Consensus 395 all~~~~~y~~~~~~~~~~R~~~l~~~L-g-~-~~~~~-~~~--g~~Y~~~di~~~~~~~~~~~f~~~l~~~~~~~~~~~ 468 (521)
T TIGR03801 395 ALMDKENAYKAETKDICRRREKLLFRGL-G-L-PLQED-PND--VAYYTLIDLEEWAEKNYGEEFSSYLKKNYSPVDVLF 468 (521)
T ss_pred HHhccchhHHHHHHHHHHHHHHHHHHhc-C-C-CCcCC-CCC--eEEEEEeehHHHHHHhcchHHHHHHhccCCHHHHHH
Confidence 3444333456777788888888888887 2 2 11111 111 13344444442 13456766
Q ss_pred HhC---CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHHHh
Q psy8850 309 AIK---DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKLRE 375 (397)
Q Consensus 309 ~l~---~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 375 (397)
.|. +|.+.||..|.. .++++|||+.. .++++++++.++|.++++++.+
T Consensus 469 ~L~~e~gV~v~PG~~Fg~------------------~~~~vRisla~-l~~~~~~~~~~rl~~~~~~~~~ 519 (521)
T TIGR03801 469 RLAEETGIVLLPGGGFGG------------------PEWSVRVSLAN-LNEYDYAEIGRAIRKILDEYYE 519 (521)
T ss_pred HHHHhCCEEEeCchhcCC------------------CCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHHH
Confidence 665 899999976653 12679999975 5789999999999999988765
No 201
>PRK06460 hypothetical protein; Provisional
Probab=99.95 E-value=2.6e-25 Score=206.81 Aligned_cols=309 Identities=16% Similarity=0.132 Sum_probs=204.7
Q ss_pred CcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHH-HHhhCC
Q psy8850 32 NHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIR-KLENDG 110 (397)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~-~~~~~g 110 (397)
.|.+++...+...++++.++++.|.+. .+++ +||++|+..++.++. ++||+|+++.+.|+.....+. .+...|
T Consensus 36 ~~~y~r~~~p~~~~L~~~lA~l~g~~~-~v~~-~sG~~ai~~~l~al~----~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G 109 (376)
T PRK06460 36 KYRYSREANPTVLELTKKIVELENAEM-GVAF-SSGMGAISTTALALL----KPGNSVLVHRDMFGRSYRFFTDYLKNWG 109 (376)
T ss_pred CcceeCCCCccHHHHHHHHHHHhCCCc-EEEe-CCHHHHHHHHHHHHh----CCCCEEEEecCCcCcHHHHHHHHHHhhC
Confidence 456677777889999999999999974 4554 666789999998887 799999999887754444333 334449
Q ss_pred cEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCccccccCccccc
Q psy8850 111 FRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVD 190 (397)
Q Consensus 111 ~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d 190 (397)
.++..++.+ +.+.+++.+++++++|++++++||||.+.|+++|+++|+++|+++|+|++++.+... .....++|
T Consensus 110 ~~v~~~~~~-----~~~~l~~~~~~~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivDea~~~~~~~-~~l~~~~d 183 (376)
T PRK06460 110 VNVDASNPG-----SDNIIEKAKSKRYDVVFVENITNPLLRVVDITELSKVCKENGSILIVDATFSTPINQ-KPLELGAD 183 (376)
T ss_pred cEEEEECCC-----CHHHHHHhcCCCceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcCccccC-ChhhcCCC
Confidence 998888765 234566666778999999999999999999999999999999999999999855321 11134689
Q ss_pred EEEecccccc-CCCC--ceEEEEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8850 191 LMSFSAHKIY-GPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQK 267 (397)
Q Consensus 191 ~~~~s~~K~~-g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~ 267 (397)
+++.|++|++ |..+ .|+++.+++..+.+...... +.. ..+. ..+. .+++- .+.++.+.+++.++++
T Consensus 184 ivv~S~sK~l~G~~~~~~G~~~~~~~l~~~l~~~~~~------~g~-~~~~--~~a~-~~l~~-~~~l~~r~~~~~~n~~ 252 (376)
T PRK06460 184 IVVHSASKFLAGHNDVIAGLAAGYGKLLNVIDQMRRT------LGT-SLDP--HAAY-LTLRG-IKTLKIRMDVINRNAE 252 (376)
T ss_pred EEEeecceeccCCCCceEEEEecCHHHHHHHHHHHHh------cCC-CCCH--HHHH-HHHhc-hhhHHHHHHHHHHHHH
Confidence 9999999954 4322 68888776655544432211 111 1111 1111 11111 2345667888889999
Q ss_pred HHHHHHhhhcCcEEEeCCC--------------CCCCCceEEEEecCC--ChHHHHHHhC--CcEecccCccC----CCC
Q psy8850 268 RLYNGLMESIEEIYINGDM--------------NNRIPHNLNISFNFI--EGESLLMAIK--DIAVSSGSACT----SAS 325 (397)
Q Consensus 268 ~l~~~l~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~--~~~~~~~~l~--~i~~~~g~~~~----~~~ 325 (397)
++.+.|++ .|.+..+.-| ....++++.|.+++. ...++.+.|+ .....-|...+ |.+
T Consensus 253 ~l~~~L~~-~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s~~~~~~~~~~~~~~~~l~~~~~~~s~Gg~~sl~~~p~~ 331 (376)
T PRK06460 253 QIAEFLEG-HPKVVKVYYPGLKSHVDYEIARRVLKGFGGVLSFEVNGGQESALKVMKSLKLIIPAQTLGGVNSVISHPAT 331 (376)
T ss_pred HHHHHHHc-CCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCcHHHHHHHHHhCCcceeccCCCCCceEEeCccc
Confidence 99999998 6765433221 123567888888631 1345555554 23333332222 111
Q ss_pred CCh----hhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHH
Q psy8850 326 LEP----SYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKK 372 (397)
Q Consensus 326 ~~~----~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 372 (397)
+.+ .......|+.+ +.||+|++. ||.|.+++.|.+++..
T Consensus 332 ~~~~~~~~~~~~~~gi~~----~liR~svGl----E~~~dl~~dl~~al~~ 374 (376)
T PRK06460 332 MSHRTLSLEERKIVGITD----SLLRLSVGI----EDVNDLIEDLDRALST 374 (376)
T ss_pred cccccCCHHHHHhcCCCC----CeEEEEecc----CCHHHHHHHHHHHHHh
Confidence 111 12333455554 899999997 6777778888777754
No 202
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.95 E-value=6.4e-25 Score=206.36 Aligned_cols=316 Identities=17% Similarity=0.132 Sum_probs=207.6
Q ss_pred cchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHH-HHHhhCCc
Q psy8850 33 HIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSI-RKLENDGF 111 (397)
Q Consensus 33 ~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~-~~~~~~g~ 111 (397)
+.+++...+....+++.++++.|.+ ..++++||+.|+.+++.++. ++||+|++++..|.++...+ ..+.+.|+
T Consensus 61 ~~Y~r~~~pt~~~le~~la~l~g~~--~~v~fsSG~~Ai~~al~~ll----~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi 134 (437)
T PRK05613 61 PIYSRLTNPTVEALENRIASLEGGV--HAVAFASGQAAETAAILNLA----GAGDHIVTSPRLYGGTETLFLVTLNRLGI 134 (437)
T ss_pred ceeeCccChHHHHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHHhc----CCCCEEEECCCccHHHHHHHHHHHHhcCe
Confidence 3444455678899999999999985 45555666688888888776 78999999999999986544 33455599
Q ss_pred EEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCccccccCcccccE
Q psy8850 112 RVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDL 191 (397)
Q Consensus 112 ~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~ 191 (397)
++++++ +. .|+++++++++++|++|+++++.||+|.+.|+++|.++|+++|+++|+|++++.+... +...+++|+
T Consensus 135 ~v~~vd-~~---~d~e~l~~~l~~~tk~V~~e~~~Np~~~v~di~~I~~la~~~gi~livD~t~a~g~~~-~p~~~GaDi 209 (437)
T PRK05613 135 EVTFVE-NP---DDPESWQAAVQPNTKAFFGETFANPQADVLDIPAVAEVAHRNQVPLIVDNTIATAALV-RPLELGADV 209 (437)
T ss_pred EEEEEC-CC---CCHHHHHHhCCccCeEEEEECCCCCCCcccCHHHHHHHHHHcCCeEEEECCCcccccc-ChHHhCCCE
Confidence 999998 32 2799999999999999999999999999999999999999999999999999877653 334568999
Q ss_pred EEeccccccCCCC--ceEEEE-ecCCC-C------cccccccc-C-----------Cc----------cccccCCCCchh
Q psy8850 192 MSFSAHKIYGPKG--IGALYI-RRNPR-T------RIEAQIHG-G-----------GH----------EYGLRSGTLATH 239 (397)
Q Consensus 192 ~~~s~~K~~g~~g--~g~~~~-~~~~~-~------~~~~~~~~-~-----------~~----------~~~~~~~~~~~~ 239 (397)
+++|+||++++.| +|.+++ +++.. . .+.+.... . .. ......+..+..
T Consensus 210 vv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~ 289 (437)
T PRK05613 210 VVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAPAFGLKARAGLLRDTGATLSPF 289 (437)
T ss_pred EEeeccceecCCCcceeEEEEecCcccccccccccccCCCCCCCccccccccccccchHHHHHHHHHHHHHhcCCCCCHH
Confidence 9999999666543 344444 33211 0 00000000 0 00 000001111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCC---------------CCCCceEEEEecCC--C
Q psy8850 240 QIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMN---------------NRIPHNLNISFNFI--E 302 (397)
Q Consensus 240 ~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~--~ 302 (397)
..+.+...++ .+.-+.++..+++..+.+.|++ .|.+..+.-|+ ...++++.|.+++. .
T Consensus 290 ~a~l~~rgl~----TL~lR~~~~~~nA~~lA~~L~~-hp~V~~V~yPgl~~~p~~~~~~~~~~~g~gg~~sf~l~~~~~~ 364 (437)
T PRK05613 290 NAWVTAQGLD----TLSLRLERHNENAIKVAEFLNN-HEKVAKVNFAGLKDSPWYATKEKLGLKYTGSVLSFDIKGGKDE 364 (437)
T ss_pred HHHHHHcccC----cHHHHHHHHHHHHHHHHHHHHc-CCCcceEECCCCCCCccHHHHHHhcCCCCceEEEEEecCCHHH
Confidence 1111111111 3566778889999999999998 77764332211 12466888888631 1
Q ss_pred hHHHHHHhC--CcEecccCccC----CCCCCh----hhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHH
Q psy8850 303 GESLLMAIK--DIAVSSGSACT----SASLEP----SYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKK 372 (397)
Q Consensus 303 ~~~~~~~l~--~i~~~~g~~~~----~~~~~~----~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 372 (397)
...+.+.|+ .....-|...+ |..+.+ ....+..|+.+ +.||||++. |+.|.+++.|.+++++
T Consensus 365 ~~~f~~~l~l~~~~~slG~~~sLv~~p~~~~h~~~~~~~~~~~Gi~~----~liRlsvGl----E~~~dLi~Dl~~Al~~ 436 (437)
T PRK05613 365 AWAFIDALKLHSNLANIGDVRSLVVHPATTTHSQSDEAGLARAGITQ----ATVRLSVGI----EDIDDIIADLEGGFAA 436 (437)
T ss_pred HHHHHHhCCcceEccCCCCCchhhcCCCccCCccCCHHHHHhcCCCC----CeEEEEecc----CCHHHHHHHHHHHHhh
Confidence 345666665 33333443332 222211 22344667665 899999997 6777778887777653
No 203
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.95 E-value=3.2e-25 Score=206.23 Aligned_cols=302 Identities=13% Similarity=0.048 Sum_probs=199.0
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHh---CCCCCcEEEeCChhHHHHHHHHHh-Hhhhc
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLI---YADPREIIWTSGATESNNLAIKGA-AHFYK 83 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~---~~~~~~i~~~~g~t~a~~~~l~~l-~~~~~ 83 (397)
++++.+.+++.+.... . .|.......+...++.+.+.+.+ ++++++|++|+|+++|+..++..+ .
T Consensus 34 ~~~~~~~~~~~~~~~~-~------~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~---- 102 (357)
T TIGR03539 34 PVPPLIRAALAAAADA-P------GYPQTWGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKELVAWLPTLLGL---- 102 (357)
T ss_pred CCCHHHHHHHHHHHhh-C------CCCcccCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccChHHHHHHHHHHHcC----
Confidence 4567788888765432 1 12111112233334444444433 466789999999999999988876 5
Q ss_pred cCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCccccccc---HHHHHH
Q psy8850 84 KRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---ILEIGE 160 (397)
Q Consensus 84 ~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~---l~~i~~ 160 (397)
++||.|++++|+|+++...+... |.+++.++ +++.++ .+++++|++++++||||.+++ +++|.+
T Consensus 103 ~~gd~Vl~~~p~y~~~~~~~~~~---g~~~~~v~-------~~~~l~---~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~ 169 (357)
T TIGR03539 103 GPGDTVVIPELAYPTYEVGALLA---GATPVAAD-------DPTELD---PVGPDLIWLNSPGNPTGRVLSVDELRAIVA 169 (357)
T ss_pred CCCCEEEECCCCcHHHHHHHHhc---CCEEeccC-------ChhhcC---ccCccEEEEeCCCCCcCccCCHHHHHHHHH
Confidence 79999999999999998776655 88887764 223222 357899999999999999998 566888
Q ss_pred HHHhcCcEEEEecccccCc---ccc---ccC----cccccEEEeccccccCCCC--ceEEEEecCCCCccccccccCCcc
Q psy8850 161 LCRSKGVIFHCDAAQAVGK---IDI---NIQ----NYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHE 228 (397)
Q Consensus 161 l~~~~gi~livD~a~~~~~---~~~---~~~----~~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~ 228 (397)
+|++||+++|+|++|.... .+. +.. .....+++.|++|.+|.+| +|+++++++....+......
T Consensus 170 ~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G~~i~~~~~~~~~~~~~~~---- 245 (357)
T TIGR03539 170 WARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAGFVAGDPALVAELLTVRKH---- 245 (357)
T ss_pred HHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCCceeEEEEecCHHHHHHHHHHHhh----
Confidence 8999999999999986211 111 100 1124588899999665445 68888776655554332211
Q ss_pred ccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCChHHHHH
Q psy8850 229 YGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLM 308 (397)
Q Consensus 229 ~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (397)
....++.....++.++++. ..++...++.+.++++.+.+.|++ . ++.+..+.. +.++++..+ .+..++.+
T Consensus 246 ---~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~L~~-~-g~~~~~p~~---~~~~~~~~~-~~~~~~~~ 315 (357)
T TIGR03539 246 ---AGLMVPAPVQAAMVAALGD-DGHVAEQKARYAARRAQLKPALEK-A-GFRIDHSEA---GLYLWATRG-EDAWDTVD 315 (357)
T ss_pred ---cccCCCHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHHHHHHHHH-c-CCCCcCCCc---cEEEEEECC-CCHHHHHH
Confidence 0112344444444455542 234667788888889999999988 4 555443322 334455544 24556766
Q ss_pred HhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHH
Q psy8850 309 AIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLL 366 (397)
Q Consensus 309 ~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l 366 (397)
.|. ||.+.+|..|.. ...++|||+++. +.+++++++++|
T Consensus 316 ~l~~~gV~v~pg~~f~~-----------------~~~~~iRis~~~--~~~~i~~~~~~l 356 (357)
T TIGR03539 316 RLAELGILVAPGDFYGP-----------------AGSQHVRVALTA--TDERIAAAVARL 356 (357)
T ss_pred HHHhCCEEECCccccCC-----------------CCCCeEEEEecC--CHHHHHHHHHhh
Confidence 665 899999865432 113799999986 689999998876
No 204
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.95 E-value=9.7e-25 Score=205.06 Aligned_cols=317 Identities=15% Similarity=0.141 Sum_probs=212.5
Q ss_pred hhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHH-HhhCCcEE
Q psy8850 35 YGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRK-LENDGFRV 113 (397)
Q Consensus 35 ~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~-~~~~g~~v 113 (397)
+++...+....+++.++++.|.+ ..++++||+.|+.+++.++. ++||+|+++...|.++...+.. +.+.|+++
T Consensus 63 Ysr~~~p~~~~Le~~lA~l~g~~--~av~~sSG~aAi~~al~all----~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v 136 (436)
T PRK07812 63 YTRIMNPTQDVVEQRIAALEGGV--AALLLASGQAAETFAILNLA----GAGDHIVSSPRLYGGTYNLFHYTLPKLGIEV 136 (436)
T ss_pred ccCCCCchHHHHHHHHHHHhCCC--eEEEEccHHHHHHHHHHHHh----CCCCEEEEeCCcchHHHHHHHHHhhcCeEEE
Confidence 33344456779999999999987 47888899999999999887 7999999999999888776654 34458888
Q ss_pred EEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCccccccCcccccEEE
Q psy8850 114 TYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMS 193 (397)
Q Consensus 114 ~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~ 193 (397)
+.++ +. .|++++++++++++++|++++++||+|.+.|+++|.++||++|+++|+|++++.+..... ..+++|+++
T Consensus 137 ~~vd-d~---~d~e~l~~ai~~~tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD~t~a~~~~~~p-l~~GaDivv 211 (436)
T PRK07812 137 SFVE-DP---DDLDAWRAAVRPNTKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVDNTIATPYLIRP-LEHGADIVV 211 (436)
T ss_pred EEEC-CC---CCHHHHHHhCCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccCCc-hhcCCCEEE
Confidence 8885 22 289999999999999999999999999999999999999999999999999987655332 346899999
Q ss_pred eccccccCCCC--ceEEEEecCCCCccccccccCCcc-------------------------ccccCCCCchhHHHHHHH
Q psy8850 194 FSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHE-------------------------YGLRSGTLATHQIVGMGE 246 (397)
Q Consensus 194 ~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~l~~ 246 (397)
.|+||++|+.| +|.+++.................. .....+.++....+.+..
T Consensus 212 ~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~r 291 (436)
T PRK07812 212 HSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKARVQLLRDLGSAISPFNAFLIAQ 291 (436)
T ss_pred EecccccCCCCCeEEEEEEcCCccccccccccccccCCcccccchhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHHhc
Confidence 99999666555 455555322111000000000000 000000111111111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCC---------------CCCCceEEEEecCC--ChHHHHHH
Q psy8850 247 AFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMN---------------NRIPHNLNISFNFI--EGESLLMA 309 (397)
Q Consensus 247 al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~--~~~~~~~~ 309 (397)
.+ ..+..+.++..+++..+.+.|++ .|.+..+..|+ ...++++.|.+++. ....+.+.
T Consensus 292 gl----~tL~~R~~~~~~nA~~la~~L~~-~p~v~~V~yPgl~s~p~~~~~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~ 366 (436)
T PRK07812 292 GL----ETLSLRIERHVANAQRVAEFLEA-RDEVASVNYAGLPSSPWYERAKRLAPKGTGAVLSFELAGGVEAGKAFVNA 366 (436)
T ss_pred Cc----CcHHHHHHHHHHHHHHHHHHHHh-CCCccEEECCCCCCCccHHHHHHhCcCCCceEEEEEecCCHHHHHHHHHh
Confidence 11 13667788889999999999998 77764332221 23467888888641 13466666
Q ss_pred hC--CcEecccCccC----CCCCCh----hhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHHHh
Q psy8850 310 IK--DIAVSSGSACT----SASLEP----SYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKLRE 375 (397)
Q Consensus 310 l~--~i~~~~g~~~~----~~~~~~----~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 375 (397)
|+ .....-|...+ |..+.+ ....+..|+.+ +.||||++. |++|.+++.|.++++..++
T Consensus 367 l~l~~~a~slG~~~sLi~~p~~~~h~~~~~~~~~~~gi~~----~liRlSvGl----Ed~~dli~dl~~Al~~~~~ 434 (436)
T PRK07812 367 LTLHSHVANIGDVRSLVIHPASTTHSQLTPEEQLATGVTP----GLVRLAVGI----EGIDDILADLEAGFAAAKA 434 (436)
T ss_pred CCcceEecccCCCcceeeCCCCCCcccCCHHHHHhcCCCC----CeEEEEecc----CCHHHHHHHHHHHHHhhhc
Confidence 66 33344444333 222221 12234566664 899999997 6788888888888887665
No 205
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.95 E-value=2.2e-25 Score=204.97 Aligned_cols=271 Identities=17% Similarity=0.165 Sum_probs=196.5
Q ss_pred HHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCC
Q psy8850 43 IEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNG 122 (397)
Q Consensus 43 ~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~ 122 (397)
..++++.++++++.++++|++|+|+++++..+... . .+| .|++.+|+|..+...+... |.++..++
T Consensus 49 ~~~lr~~la~~~~~~~~~i~~t~G~~~~i~~~~~~-l----~~g-~vl~~~p~y~~~~~~~~~~---g~~~~~~~----- 114 (330)
T TIGR01140 49 YDELRAAAAAYYGLPAASVLPVNGAQEAIYLLPRL-L----APG-RVLVLAPTYSEYARAWRAA---GHEVVELP----- 114 (330)
T ss_pred HHHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHH-h----CCC-eEEEeCCCcHHHHHHHHHc---CCEEEEeC-----
Confidence 48899999999999888999999999999987665 3 466 6999999999988776655 99988887
Q ss_pred CCCHHHHHHHhcCCceEEEEecccCccccccc---HHHHHHHHHhcCcEEEEecccccCccccccC----cccccEEEec
Q psy8850 123 LITLSQLEEKICSDTILVSVMLVNNEIGVIQP---ILEIGELCRSKGVIFHCDAAQAVGKIDINIQ----NYKVDLMSFS 195 (397)
Q Consensus 123 ~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~---l~~i~~l~~~~gi~livD~a~~~~~~~~~~~----~~~~d~~~~s 195 (397)
|++++++++ ++++++++++|+||||.++| +++|+++|+++|++||+|++|.......++. ..+.++++.|
T Consensus 115 --d~~~l~~~~-~~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~i~~~S 191 (330)
T TIGR01140 115 --DLDRLPAAL-EELDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPDASLAPQAARFPGLVVLRS 191 (330)
T ss_pred --CHHHHHhhc-ccCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCccchhhHhccCCCEEEEEe
Confidence 789999988 46789999999999999999 5667888999999999999997333221211 1256799999
Q ss_pred cccccCCCC--ceEEEEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8850 196 AHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGL 273 (397)
Q Consensus 196 ~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l 273 (397)
++|.+|.+| +|+++++++....+...... .+.+.....++...++. .+..++..++++.+++.+.+.|
T Consensus 192 ~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~---------~~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L 261 (330)
T TIGR01140 192 LTKFFGLAGLRLGFVVAHPALLARLREALGP---------WTVNGPARAAGRAALAD-TAWQAATRARLAAERARLAALL 261 (330)
T ss_pred cchhhcCchhhhhheeCCHHHHHHHHhcCCC---------CCchHHHHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHH
Confidence 999776445 69999987765555443211 12233333333344432 1234667889999999999999
Q ss_pred hhhcCcEEEeCCCCCCCCceEEEEecCCChHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeC
Q psy8850 274 MESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIG 351 (397)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~ 351 (397)
++ ++.+.+... . +.++++.++ +..++.+.|. ||.+.+|..|.. ...++|||+++
T Consensus 262 ~~-~~~~~~~~~-~---~~f~~~~~~--~~~~l~~~l~~~gi~v~pg~~f~~-----------------~~~~~iRi~~~ 317 (330)
T TIGR01140 262 AR-LGGLEVVGG-T---ALFLLVRTP--DAAALHEALARRGILIRDFDNFPG-----------------LDPRYLRFALP 317 (330)
T ss_pred Hh-CCCceECCC-C---CeEEEEEcC--CHHHHHHHHHHCCEEEEECCCCCC-----------------CCCCEEEEEec
Confidence 99 665554322 2 345556654 3567777776 999999976531 11378999998
Q ss_pred CCCCHHHHHHHHHHHH
Q psy8850 352 RFTTEKEIDFTIKLLK 367 (397)
Q Consensus 352 ~~~~~~~i~~~~~~l~ 367 (397)
. ..++ ++++++|+
T Consensus 318 ~--~~~~-~~~~~~l~ 330 (330)
T TIGR01140 318 T--DEEN-DRLEEALA 330 (330)
T ss_pred C--HHHH-HHHHHhhC
Confidence 4 3345 88887763
No 206
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.95 E-value=6.2e-25 Score=205.21 Aligned_cols=330 Identities=18% Similarity=0.147 Sum_probs=224.5
Q ss_pred CHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHh-HhhhccCCCE
Q psy8850 10 DPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGA-AHFYKKRGKH 88 (397)
Q Consensus 10 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l-~~~~~~~g~~ 88 (397)
+++-++++.+.+.+-+ ... .+...++++.+++++|.+ ++++++|||+|+.+++.++ . ++||+
T Consensus 13 ~~~e~~~~~~~l~~~~-------~~~----g~~~~~le~~la~~~g~~--~~v~~~sgt~al~lal~al~~----~~Gd~ 75 (379)
T PRK11658 13 GDEELAAVKEVLRSGW-------ITT----GPKNQALEQAFCQLTGNQ--HAIAVSSATAGMHITLMALGI----GPGDE 75 (379)
T ss_pred CHHHHHHHHHHHHcCC-------ccC----CHhHHHHHHHHHHHhCCC--eEEEECCHHHHHHHHHHHcCC----CCCCE
Confidence 4566778887776411 111 235789999999999987 6888999999999999988 5 78999
Q ss_pred EEEcCCCChhhHHHHHHHhhCCcEEEEeccCC-CCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCc
Q psy8850 89 IITVQTEHKSVLDSIRKLENDGFRVTYLKPKN-NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGV 167 (397)
Q Consensus 89 vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~-~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi 167 (397)
|++++++|.++...+... |.+++.++++. ++.+|++++++++++++++|+.. +++|...|+++|.++|+++|+
T Consensus 76 Viv~~~~~~~~~~~~~~~---G~~~v~vd~~~~~~~~d~~~l~~~i~~~tkav~~~---~~~G~~~d~~~i~~~a~~~gi 149 (379)
T PRK11658 76 VITPSLTWVSTLNMIVLL---GATPVMVDVDRDTLMVTPEAIEAAITPRTKAIIPV---HYAGAPADLDAIRAIGERYGI 149 (379)
T ss_pred EEECCCcHHHHHHHHHHc---CCEEEEEecCCCcCCcCHHHHHHhcccCCeEEEEe---CCCCCcCCHHHHHHHHHHcCC
Confidence 999999999998777665 99999999985 45689999999999999998744 458999999999999999999
Q ss_pred EEEEecccccCcccc--ccCcccccEEEecccc-ccCCCCceEEEEe-cCCCCccccccccCCccc--------------
Q psy8850 168 IFHCDAAQAVGKIDI--NIQNYKVDLMSFSAHK-IYGPKGIGALYIR-RNPRTRIEAQIHGGGHEY-------------- 229 (397)
Q Consensus 168 ~livD~a~~~~~~~~--~~~~~~~d~~~~s~~K-~~g~~g~g~~~~~-~~~~~~~~~~~~~~~~~~-------------- 229 (397)
+||+|++|+.|.... .....+.++++++.+| +.++.| |+++.+ ++...+++.....|....
T Consensus 150 ~vi~D~a~a~g~~~~~~~~g~~g~~~~Sf~~~K~l~~g~G-G~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~ 228 (379)
T PRK11658 150 PVIEDAAHAVGTYYKGRHIGARGTAIFSFHAIKNITCAEG-GLVVTDDDELADRLRSLKFHGLGVDAFDRQTQGRAPQAE 228 (379)
T ss_pred eEEEECCCccCCeECCeecCCCCCEEEeCCCCCcCcccCc-eEEEECCHHHHHHHHHHHHcCCCcchhhhhcccCCCcce
Confidence 999999999876543 2334456777777778 655543 766665 344444443322221100
Q ss_pred cccCCCCchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCC--CCCCceEEEEec----CCC
Q psy8850 230 GLRSGTLATHQIVGMGEAFRLAR-IEMKEELKRILFLQKRLYNGLMESIEEIYINGDMN--NRIPHNLNISFN----FIE 302 (397)
Q Consensus 230 ~~~~~~~~~~~~~~l~~al~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~----~~~ 302 (397)
.+..|.. ..+..+.+++.... +++++..++.+++.+++.+.|.+ ++...+..+.. ....+.+.+.++ +.+
T Consensus 229 ~~~~G~n--~~~~~l~AAl~~~ql~~l~~~~~~r~~~a~~~~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (379)
T PRK11658 229 VLTPGYK--YNLADINAAIALVQLAKLEALNARRREIAARYLQALAD-LPFQPLSLPAWPHQHAWHLFIIRVDEERCGIS 305 (379)
T ss_pred eeccccc--cCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCCccCcCCCCCCceeEEEEEEEECCccccCC
Confidence 0112221 11334555555443 36888889999999999999988 65433322211 112244455554 235
Q ss_pred hHHHHHHhC--CcEecccCccCCCCCChhhHHHhh-C-----CCccccCceEEEeeCCCCCHHHHHHHHHHHHHHH
Q psy8850 303 GESLLMAIK--DIAVSSGSACTSASLEPSYVLRAL-G-----CNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKV 370 (397)
Q Consensus 303 ~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~-g-----~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~ 370 (397)
..++.+.|. ||.. +.+|.+....+ .++.. . .........|.+.+....+++|++++++.|++++
T Consensus 306 r~~~~~~L~~~gI~~--~~~~~~~~~~~--~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~ 377 (379)
T PRK11658 306 RDALMEALKERGIGT--GLHFRAAHTQK--YYRERFPTLSLPNTEWNSERICSLPLFPDMTDADVDRVITALQQIA 377 (379)
T ss_pred HHHHHHHHHHCCCCC--cccCcCcccCh--hhhccCCCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHH
Confidence 678888887 6553 33344422221 11110 0 1122235778888888899999999999999875
No 207
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.94 E-value=2.4e-25 Score=209.92 Aligned_cols=309 Identities=13% Similarity=0.112 Sum_probs=199.1
Q ss_pred HHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhC------CCCCcE--EEeCChhHHHHHHHHHhHhhh
Q psy8850 11 PRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIY------ADPREI--IWTSGATESNNLAIKGAAHFY 82 (397)
Q Consensus 11 ~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~------~~~~~i--~~~~g~t~a~~~~l~~l~~~~ 82 (397)
+.+.+++.+..... ...+|....+..++|+++++++. +++++| ++|+|+++|+.++++++...
T Consensus 47 ~~l~~a~~~~~~~~--------~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~~al~~~~~~l~~~- 117 (396)
T PRK09257 47 RAVKKAEARLLETE--------TTKNYLPIEGLAAYRQAVQELLFGADSPALAAGRVATVQTPGGTGALRVGADFLKRA- 117 (396)
T ss_pred HHHHHHHHHhcccc--------cCCCcCCCCCCHHHHHHHHHHhcCCCCcccccCeEEEEecCCccHHHHHHHHHHHHh-
Confidence 56777766654321 11122223456777777777752 256666 99999999999998765311
Q ss_pred ccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEecc-C-CCCCCCHHHHHHHhc---CCceEEEEecccCccccccc---
Q psy8850 83 KKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKP-K-NNGLITLSQLEEKIC---SDTILVSVMLVNNEIGVIQP--- 154 (397)
Q Consensus 83 ~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~-~-~~~~~d~~~l~~~i~---~~~~~v~~~~~~~~tG~~~~--- 154 (397)
++||+|++.+|+|+.+...+... |.+++.+|. + +++.+|++++++++. +++.+++++++|||||.+++
T Consensus 118 -~pGd~Vlv~~P~y~~~~~~~~~~---g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~~i~~~p~NPTG~~~s~~~ 193 (396)
T PRK09257 118 -FPDAKVWVSDPTWPNHRAIFEAA---GLEVKTYPYYDAATKGLDFDAMLADLSQAPAGDVVLLHGCCHNPTGADLTPEQ 193 (396)
T ss_pred -CCCCeEEECCCCcccHHHHHHHc---CCcEEEEeccccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHH
Confidence 68999999999999999888887 999999997 3 346799999999876 34567778999999999999
Q ss_pred HHHHHHHHHhcCcEEEEecccccCccc-----cc---cCc-ccccEEEeccccccCCCC--ceEEEE--ec-CCCCcccc
Q psy8850 155 ILEIGELCRSKGVIFHCDAAQAVGKID-----IN---IQN-YKVDLMSFSAHKIYGPKG--IGALYI--RR-NPRTRIEA 220 (397)
Q Consensus 155 l~~i~~l~~~~gi~livD~a~~~~~~~-----~~---~~~-~~~d~~~~s~~K~~g~~g--~g~~~~--~~-~~~~~~~~ 220 (397)
+++|+++|++||++||+|++|...... .. +.. ....+++.|++|.+++.| +|++++ .+ +....+..
T Consensus 194 ~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRiG~~~~~~~~~~~~~~~~~ 273 (396)
T PRK09257 194 WDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLS 273 (396)
T ss_pred HHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEcCCcCccccccceeEEEEeCCHHHHHHHHH
Confidence 567889999999999999998732110 11 111 124588899999766555 788874 21 11111111
Q ss_pred ccccCCccccccCCCCchhHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHhhhcC--cEEEeCCCCCCCCc
Q psy8850 221 QIHGGGHEYGLRSGTLATHQIVGMGEAFRL------ARIEMKEELKRILFLQKRLYNGLMESIE--EIYINGDMNNRIPH 292 (397)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~l~~al~~------~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~~~~~~~~~~ 292 (397)
.+... .....+.++.....++...++. +.+++++.+++++++++.+.+.|++..+ ++.+..+++ +.
T Consensus 274 ~~~~~---~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~l~~~L~~~~~~~~~~~~~p~g---g~ 347 (396)
T PRK09257 274 QLKAT---IRTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQLLVEALKAKGPSRDFDFIARQR---GM 347 (396)
T ss_pred HHHHH---hhhhcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccc---eE
Confidence 11000 0001112233333333333331 2345777889999999999999988222 244443322 33
Q ss_pred eEEEEecCCChHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHH
Q psy8850 293 NLNISFNFIEGESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (397)
Q Consensus 293 ~~~~~~~~~~~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 369 (397)
.+++.+ +...+...+. +|.+.+. + ||+++. .++++|++++++|+++
T Consensus 348 ~~w~~l---~~~~~~~l~~~~~V~~~p~-------------------------~--ri~~~~-~~~~~i~~~~~~i~~~ 395 (396)
T PRK09257 348 FSYSGL---TPEQVDRLREEFGVYAVGS-------------------------G--RINVAG-LNESNIDYVAEAIAAV 395 (396)
T ss_pred EEecCC---CHHHHHHHHHcCCEEEcCC-------------------------C--eEEEee-CCHHHHHHHHHHHHhh
Confidence 333333 3333333222 6766531 2 999975 6899999999999875
No 208
>PRK05939 hypothetical protein; Provisional
Probab=99.94 E-value=6.2e-25 Score=205.01 Aligned_cols=314 Identities=14% Similarity=0.098 Sum_probs=206.4
Q ss_pred cchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHHhhCCcE
Q psy8850 33 HIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFR 112 (397)
Q Consensus 33 ~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~ 112 (397)
+.+++...+....+++.++++.|.+ ..+++++|+.|+..++.++. ++||+|+++++.|+++...+..+...|++
T Consensus 39 ~~Y~r~g~p~~~~lE~~la~leg~~--~~v~~ssG~~Ai~~~l~all----~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~ 112 (397)
T PRK05939 39 FTYARQGTPTTAALEAKITKMEGGV--GTVCFATGMAAIAAVFLTLL----RAGDHLVSSQFLFGNTNSLFGTLRGLGVE 112 (397)
T ss_pred CCcCCCCCHHHHHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHHHc----CCCCEEEECCCccccHHHHHHHHHhcCCE
Confidence 4445555677889999999999987 34556667899999998887 89999999999999887766666666999
Q ss_pred EEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCccccccCcccccEE
Q psy8850 113 VTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLM 192 (397)
Q Consensus 113 v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~~ 192 (397)
++.++.. |+++++++++++|++|++++++||+|.+.|+++|+++||++|+++++|++++.+. .++...+++|++
T Consensus 113 v~~v~~~-----d~e~l~~~l~~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~t~a~~~-~~~~~~~gaDiv 186 (397)
T PRK05939 113 VTMVDAT-----DVQNVAAAIRPNTRMVFVETIANPGTQVADLAGIGALCRERGLLYVVDNTMTSPW-LFRPKDVGASLV 186 (397)
T ss_pred EEEECCC-----CHHHHHHhCCCCCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEECCccccc-ccCccccCCEEE
Confidence 9999864 8999999999999999999999999999999999999999999999999997664 334555689999
Q ss_pred EeccccccCCCC--ceEEEEecCCCCc-----cccccccCC---c----c----ccccCCCCchhHHHHHHHHHHHHHHH
Q psy8850 193 SFSAHKIYGPKG--IGALYIRRNPRTR-----IEAQIHGGG---H----E----YGLRSGTLATHQIVGMGEAFRLARIE 254 (397)
Q Consensus 193 ~~s~~K~~g~~g--~g~~~~~~~~~~~-----~~~~~~~~~---~----~----~~~~~~~~~~~~~~~l~~al~~~~~~ 254 (397)
+.|++|++++.| +|.+++.+..... +........ . . .....+..+....+.+...++ .
T Consensus 187 v~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~----t 262 (397)
T PRK05939 187 INSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKGLRDMGATLSSEAAHRIAIGAE----T 262 (397)
T ss_pred EecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcC----c
Confidence 999999555444 3444443221110 100000000 0 0 000011111111111111222 3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCC--------------CCCCceEEEEecCC-ChHHHHHHhC--CcEecc
Q psy8850 255 MKEELKRILFLQKRLYNGLMESIEEIYINGDMN--------------NRIPHNLNISFNFI-EGESLLMAIK--DIAVSS 317 (397)
Q Consensus 255 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~-~~~~~~~~l~--~i~~~~ 317 (397)
+..+.++..+++..+.+.|++ .|.+..+.-|. ...+.++.|.+++. +...+...++ .....-
T Consensus 263 l~~R~~~~~~na~~la~~L~~-~p~V~~V~yP~l~~~p~~~~~~~~~~g~g~l~sf~~~~~~~~~~f~~~l~l~~~~~s~ 341 (397)
T PRK05939 263 LALRVDRSCSNALALAQFLEA-HPKVARVYYPGLASHPQHARATELFRHYGGLLSFELADGIDCFDFLNRLKLVIKATHL 341 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHHh-CCCccEEECCCCCCCchHHHHHHhccCCceEEEEEeCCHHHHHHHHHhCCcceEccCC
Confidence 555677777788889999988 67654332221 23467888888642 1234555554 233333
Q ss_pred cCccCCC----CCCh----hhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHH
Q psy8850 318 GSACTSA----SLEP----SYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVK 371 (397)
Q Consensus 318 g~~~~~~----~~~~----~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 371 (397)
|...+.. .+.+ ....+..|+.+ +.||||++. |++|.+++.|.++++
T Consensus 342 G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~----~lvR~svGl----Ed~~dLi~dl~~Al~ 395 (397)
T PRK05939 342 GDTRTLVIPVAPTIYYEMGAERRASMGIAD----SLIRVSVGI----EDEADLIADFEQALD 395 (397)
T ss_pred CCCCeeeecCcccccccCCHHHHHhcCCCC----CeEEEEeCC----CCHHHHHHHHHHHHh
Confidence 4333221 1111 11223455554 899999997 577778888877764
No 209
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.94 E-value=6.3e-24 Score=210.93 Aligned_cols=309 Identities=12% Similarity=0.102 Sum_probs=219.0
Q ss_pred HHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhc----cCCCEEEEcCCCChhhHHHHHHHhhCCcEEE
Q psy8850 39 AEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYK----KRGKHIITVQTEHKSVLDSIRKLENDGFRVT 114 (397)
Q Consensus 39 ~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~----~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~ 114 (397)
..+.+.+++++|++++|.+. .-+..++|++|..+.+.++...+. .++++|+++...|+++-.++... |++++
T Consensus 528 ~lq~i~elq~~l~eltGmd~-~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPasa~~~---G~~Vv 603 (939)
T TIGR00461 528 YQELIAQLEKWLCSITGFDA-ISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPASAAMA---GMQVV 603 (939)
T ss_pred HHHHHHHHHHHHHHHHCCCC-cccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHHHHHC---CCEEE
Confidence 56889999999999999993 334445666666666666543221 23578999999999998777776 99999
Q ss_pred EeccCCCCCCCHHHHHHHhcC---CceEEEEecccCccccccc-HHHHHHHHHhcCcEEEEecccccCccc-cccCcccc
Q psy8850 115 YLKPKNNGLITLSQLEEKICS---DTILVSVMLVNNEIGVIQP-ILEIGELCRSKGVIFHCDAAQAVGKID-INIQNYKV 189 (397)
Q Consensus 115 ~v~~~~~~~~d~~~l~~~i~~---~~~~v~~~~~~~~tG~~~~-l~~i~~l~~~~gi~livD~a~~~~~~~-~~~~~~~~ 189 (397)
.+|++++|.+|+++|++++++ ++++|++++++| +|.+.| +++|+++||++|.++++|+++..+... .+...+++
T Consensus 604 ~V~~d~~G~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~l~~Pg~~Ga 682 (939)
T TIGR00461 604 PVNCDQDGNIDLVDLKNKAEQHGDELAAVMVTYPST-HGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVGLTSPGDLGA 682 (939)
T ss_pred EeccCCCCCcCHHHHHHHHhhcCCceEEEEEEeCCc-CceecccHHHHHHHHHHcCCEEEEEecChhhCCCCCCccccCC
Confidence 999999999999999999974 899999999998 788877 999999999999999999999764433 34466799
Q ss_pred cEEEecccc-cc-----CCCCceEEEEecCCCCcccccccc----C-Cccc--cccC--CCCchhHHHHHHHHHHHH-HH
Q psy8850 190 DLMSFSAHK-IY-----GPKGIGALYIRRNPRTRIEAQIHG----G-GHEY--GLRS--GTLATHQIVGMGEAFRLA-RI 253 (397)
Q Consensus 190 d~~~~s~~K-~~-----g~~g~g~~~~~~~~~~~~~~~~~~----~-~~~~--~~~~--~~~~~~~~~~l~~al~~~-~~ 253 (397)
|++++|.|| ++ |++|+|++.+++++...+.....+ . +... +... .+.+.......+..+..+ .+
T Consensus 683 Di~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg~~v~~t~d~~greq~Iga~s~~~~g~a~~~l~a~~yi~~lG~~ 762 (939)
T TIGR00461 683 DVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKHDVVSMITGIGGSKSIGSVSAAPYGSASILPISWMYIKMMGNE 762 (939)
T ss_pred CEEEecCCccCCCCCCCCCCCeEEEEEhhhchhhcCCCcccccccCCCCccccccccccccCcHHHHHHHHHHHHHHCHH
Confidence 999999999 76 566679999997644333211110 0 0011 1111 122222233334455544 56
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCC-CCCCCceEEEEec------CCChHHHHHHhC--CcEecccCccCCC
Q psy8850 254 EMKEELKRILFLQKRLYNGLMESIEEIYINGDM-NNRIPHNLNISFN------FIEGESLLMAIK--DIAVSSGSACTSA 324 (397)
Q Consensus 254 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~------~~~~~~~~~~l~--~i~~~~g~~~~~~ 324 (397)
|+.+..+....++.++.++|++ .. .+..+. .....+-+.++++ +.+..++.++|. |+.. +....|
T Consensus 763 GL~~~a~~ailnAnYl~~rL~~-~~--~~l~~~~~~~~~hEfv~~~~~~~~~~g~~~~dIakrL~d~G~ha--pt~~~p- 836 (939)
T TIGR00461 763 GLPKASVVAILNANYMATRLKD-HY--PILFVGTLKHVAHECILDLRPLKAKTGIEAIDVAKRLQDYGFHA--PTLSFP- 836 (939)
T ss_pred HHHHHHHHHHHHHHHHHHHhhc-cC--cccccCCCCceeEEEEEeccchhhhcCCCHHHHHHHHHhCCeec--cccCCc-
Confidence 7899999999999999999987 32 333221 1122345666665 256788888887 4432 211111
Q ss_pred CCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHHHh
Q psy8850 325 SLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKLRE 375 (397)
Q Consensus 325 ~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 375 (397)
. .+.+-|.++...+.+|||+++++|.++.+++++
T Consensus 837 ----------------v-~g~lmiepTE~eskeelD~f~~al~~I~~e~~~ 870 (939)
T TIGR00461 837 ----------------V-PGTLMVEPTESESLEELDRFCDAMIAIKEEINA 870 (939)
T ss_pred ----------------c-CCeEEEEeeccCCHHHHHHHHHHHHHHHHHHHH
Confidence 0 146677777778999999999999999999988
No 210
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.94 E-value=2.3e-24 Score=194.60 Aligned_cols=333 Identities=17% Similarity=0.155 Sum_probs=232.8
Q ss_pred CHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEE
Q psy8850 10 DPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHI 89 (397)
Q Consensus 10 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~v 89 (397)
.++.++++.+.+.+-+. .. .+...++++++++++|++ ..+.++|||.|+.++++++.. ++||+|
T Consensus 14 ~~~e~~~v~~vl~sg~i--------~~---G~~v~~FE~~~ae~~G~k--~ava~~sgT~AL~laL~al~i---g~GDeV 77 (374)
T COG0399 14 GEEELAAVQEVLKSGWL--------TG---GPFVRRFEQAFAEYLGVK--YAVAVSSGTAALHLALLALAI---GPGDEV 77 (374)
T ss_pred chHHHHHHHHHHHcCCe--------ec---ChHHHHHHHHHHHHhCCC--eEEEecChHHHHHHHHHhcCC---CCCCEE
Confidence 46778888888876321 11 236788999999999998 789999999999999996653 799999
Q ss_pred EEcCCCChhhHHHHHHHhhCCcEEEEeccC-CCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcE
Q psy8850 90 ITVQTEHKSVLDSIRKLENDGFRVTYLKPK-NNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVI 168 (397)
Q Consensus 90 l~~~~~~~s~~~~~~~~~~~g~~v~~v~~~-~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~ 168 (397)
+++..+|.++..++... |++++++++| +++.+|++.+|++|+++||+|+..|. .|..++++.|.++|++||++
T Consensus 78 I~ps~TfvATan~i~~~---Ga~PVFvDid~~T~nid~~~ie~aIt~~tKAIipVhl---~G~~~dm~~i~~la~~~~l~ 151 (374)
T COG0399 78 IVPSFTFVATANAVLLV---GAKPVFVDIDPDTLNIDPDLIEAAITPRTKAIIPVHL---AGQPCDMDAIMALAKRHGLP 151 (374)
T ss_pred EecCCchHHHHHHHHHc---CCeEEEEecCCcccCCCHHHHHHHcccCCeEEEEehh---ccCCCCHHHHHHHHHHcCCe
Confidence 99999999999988888 9999999999 56899999999999999999999988 69999999999999999999
Q ss_pred EEEecccccCccccccCcc--cccEEEecc--ccccCCCCceEEEEecCCC-CccccccccCCcc---ccc---cCCCCc
Q psy8850 169 FHCDAAQAVGKIDINIQNY--KVDLMSFSA--HKIYGPKGIGALYIRRNPR-TRIEAQIHGGGHE---YGL---RSGTLA 237 (397)
Q Consensus 169 livD~a~~~~~~~~~~~~~--~~d~~~~s~--~K~~g~~g~g~~~~~~~~~-~~~~~~~~~~~~~---~~~---~~~~~~ 237 (397)
||+|++|+.|...-+ +.. --|+-++|| .|.++....|.++.+++.+ ++++....-|... ..+ ..|..
T Consensus 152 vIEDaAqa~Ga~y~g-k~vGt~Gd~~~fSF~~~K~ittgEGGav~tnd~ela~k~~~lr~hG~~~~~~~~y~~~~~G~N- 229 (374)
T COG0399 152 VIEDAAQAHGATYKG-KKVGSFGDIGAFSFHATKNLTTGEGGAVVTNDEELAEKARSLRNHGLSRDAVFKYLHEELGYN- 229 (374)
T ss_pred EEEEcchhccCeecC-cccccccceEEEEecCCCCccccCceEEEeCCHHHHHHHHHHHHhCcCCCccccceeeecccc-
Confidence 999999999886432 222 235556665 5643332348888876533 3332222111111 011 11111
Q ss_pred hhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCC--CCCceEEEEecC--CChHHHHHHhC-
Q psy8850 238 THQIVGMGEAFRLA-RIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNN--RIPHNLNISFNF--IEGESLLMAIK- 311 (397)
Q Consensus 238 ~~~~~~l~~al~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~l~- 311 (397)
..+-.+.+++... .+.++++.++-+++.+++.+.|++ ++++.+...+.. ...++..+.++. .+...+...|+
T Consensus 230 -~rm~~iqAAigl~QL~~l~~~~~~R~~~a~~Y~~~l~~-~~~~~~p~~~~~~~~~~~~~~i~~~~~~~~R~~l~~~L~~ 307 (374)
T COG0399 230 -YRLTEIQAAIGLAQLERLDEINERRREIAQIYAEALKG-LPGITLPPEPDGAVHAWHLYTILVDEEGISRDALMESLKE 307 (374)
T ss_pred -cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCccccCCCCCceeeeeeeEEEecCCCCCHHHHHHHHHh
Confidence 1122233344333 235677788888889999999988 766555544332 334555556654 45678888887
Q ss_pred -CcEecccCccCCCCCChhhHHHhhCC--------CccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHH
Q psy8850 312 -DIAVSSGSACTSASLEPSYVLRALGC--------NDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKK 372 (397)
Q Consensus 312 -~i~~~~g~~~~~~~~~~~~~~~~~g~--------~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 372 (397)
||. .+.++.|... ....+..+. ........+++.+....++++++++++.|++++..
T Consensus 308 ~gi~--~~~~~~P~~~--~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~~~~~~ 373 (374)
T COG0399 308 AGVG--AVVYFRPLHL--QPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEALKEVLGS 373 (374)
T ss_pred CCCC--ceEEeecccc--chhhhcccccccCCCchHHHHhhCeEEccCCCCCCHHHHHHHHHHHHHHhcc
Confidence 444 3344444211 123333322 22345688999999999999999999999988753
No 211
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.94 E-value=1.7e-25 Score=208.04 Aligned_cols=308 Identities=13% Similarity=0.093 Sum_probs=204.5
Q ss_pred CcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHH-hhCC
Q psy8850 32 NHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKL-ENDG 110 (397)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~-~~~g 110 (397)
.|.+++...+....+++.++++.|.+ ..++++||+.|+.+++. +. ++||+|+++++.|++....+... ...|
T Consensus 41 ~~~y~r~~~p~~~~Le~~la~l~g~~--~al~~~SG~~Al~~~l~-~l----~pGd~Vi~~~~~y~~t~~~~~~~~~~~g 113 (380)
T PRK06176 41 GYEYSRSGNPTRFALEELIADLEGGV--KGFAFASGLAGIHAVFS-LF----QSGDHVLLGDDVYGGTFRLFDKVLVKNG 113 (380)
T ss_pred CCcccCCCChhHHHHHHHHHHHhCCC--CEEEECCHHHHHHHHHH-Hc----CCCCEEEEcCCChhHHHHHHHHHHHhcC
Confidence 35556666677899999999999976 35666777889987664 45 79999999999999887766543 4458
Q ss_pred cEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCccccccCccccc
Q psy8850 111 FRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVD 190 (397)
Q Consensus 111 ~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d 190 (397)
++++.++.. |++++++++++++++|++++|+||+|.+.|+++|.++|+++|+++|+|++++.+..... ..+++|
T Consensus 114 i~v~~vd~~-----d~e~l~~ai~~~t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD~t~a~~~~~~p-~~~gaD 187 (380)
T PRK06176 114 LSCTIIDTS-----DLSQIKKAIKPNTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFATPYYQNP-LLLGAD 187 (380)
T ss_pred eEEEEcCCC-----CHHHHHHhcCcCceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEECCccccccCCc-cccCCC
Confidence 898888754 89999999999999999999999999999999999999999999999999986543322 245899
Q ss_pred EEEecccc-ccCCCC--ceEEEEecC-CCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8850 191 LMSFSAHK-IYGPKG--IGALYIRRN-PRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQ 266 (397)
Q Consensus 191 ~~~~s~~K-~~g~~g--~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~ 266 (397)
++++|++| +.|+.. .|+++.+++ ...++...... .....+....+.+...++ .+..+.++..+++
T Consensus 188 ivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~~~~~~-------~G~~~~~~~~~l~~~gl~----tl~~R~~~~~~~a 256 (380)
T PRK06176 188 IVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQNA-------IGGVLGPQDSWLLQRGIK----TLGLRMEAHQKNA 256 (380)
T ss_pred EEEecCceeccCCccceeeEEEecHHHHHHHHHHHHHH-------hcCCCCHHHHHHHHhccC----cHHHHHHHHHHHH
Confidence 99999999 445432 576776543 22222211100 001111111111111222 2345566666778
Q ss_pred HHHHHHHhhhcCcEEEeCCCC--------------CCCCceEEEEecCC-ChHHHHHHhC--CcEecccCccC----CCC
Q psy8850 267 KRLYNGLMESIEEIYINGDMN--------------NRIPHNLNISFNFI-EGESLLMAIK--DIAVSSGSACT----SAS 325 (397)
Q Consensus 267 ~~l~~~l~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~-~~~~~~~~l~--~i~~~~g~~~~----~~~ 325 (397)
.++.+.|++ .+.+..+..+. ...++++.|.+++. ...++.+.|+ .+...-|...+ |..
T Consensus 257 ~~la~~L~~-~p~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~ 335 (380)
T PRK06176 257 LCVAEFLEK-HPKVEKVYYPGLPTHPNHELAKKQMRGFSGMLSFTLKNDSEAVAFVESLKLFILGESLGGVESLVGIPAF 335 (380)
T ss_pred HHHHHHHHh-CCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCHHHHHHHHHcCCcceEccCCCCCCceeeCCcc
Confidence 888888887 66654332211 13467788888642 1234555554 33444444332 222
Q ss_pred CCh----hhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHH
Q psy8850 326 LEP----SYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKK 372 (397)
Q Consensus 326 ~~~----~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 372 (397)
+.+ ....+..|+.+ +.||+|++. |++|.+++.|++++++
T Consensus 336 ~~~~~~~~~~~~~~gi~~----~liR~svGl----E~~~dli~dl~~Al~~ 378 (380)
T PRK06176 336 MTHACIPKEQREAAGIRD----GLVRLSVGI----EHEQDLLEDLEQAFAK 378 (380)
T ss_pred cccccCCHHHHHhcCCCc----CeEEEEecc----CCHHHHHHHHHHHHhh
Confidence 111 12234566654 899999996 6778888888877764
No 212
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.94 E-value=2.1e-24 Score=192.58 Aligned_cols=323 Identities=17% Similarity=0.177 Sum_probs=223.3
Q ss_pred CCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhc-c
Q psy8850 6 TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYK-K 84 (397)
Q Consensus 6 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~-~ 84 (397)
.+..+|.+++++.++..+.+. .......+...++.+.|++..+ ..+.++|+|||++|++.+++....+.. .
T Consensus 56 lGH~hP~iv~al~~Q~~kl~h-------~sn~~~~~~~~~la~~L~~~s~-~~d~vff~NSGaEA~EaAiKlARk~~~~~ 127 (404)
T COG4992 56 LGHCHPALVEALKEQAEKLWH-------VSNLFYNEPQAELAEKLVELSP-FADRVFFCNSGAEANEAALKLARKYTGDP 127 (404)
T ss_pred cCCCCHHHHHHHHHHHHHhhh-------cccccCChHHHHHHHHHHhhCc-cccEEEEcCCcHHHHHHHHHHHHHHcCCC
Confidence 456789999999999887441 1111223456778888888887 456899999999999999996554432 2
Q ss_pred CCCEEEEcCCCChhhH-HHHHHHhhC----Cc-----EEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCccccccc
Q psy8850 85 RGKHIITVQTEHKSVL-DSIRKLEND----GF-----RVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP 154 (397)
Q Consensus 85 ~g~~vl~~~~~~~s~~-~~~~~~~~~----g~-----~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~ 154 (397)
.+.+|+....+|++-. .++...... ++ .++.+|++ |+++++++++++|.+|+++.++...|++.+
T Consensus 128 ~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfn-----Di~al~~ai~~~taAvivEPIQGEgGV~~~ 202 (404)
T COG4992 128 EKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFN-----DIEALEAAIDEDTAAVIVEPIQGEGGVIPA 202 (404)
T ss_pred CCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCC-----CHHHHHHHhccCeEEEEEecccCCCCCCCC
Confidence 2346766666555443 222221110 11 24445555 899999999999999999999999999887
Q ss_pred ----HHHHHHHHHhcCcEEEEecccccC-cc----ccccCcccccEEEecccc-ccCCCCceEEEEecCCCCcccccccc
Q psy8850 155 ----ILEIGELCRSKGVIFHCDAAQAVG-KI----DINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEAQIHG 224 (397)
Q Consensus 155 ----l~~i~~l~~~~gi~livD~a~~~~-~~----~~~~~~~~~d~~~~s~~K-~~g~~g~g~~~~~~~~~~~~~~~~~~ 224 (397)
++.+.++|++||+++|.|++|..- .. ........+|+++.. | +.|+.++|+++.++.....+.+-.++
T Consensus 203 ~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~fA~e~~gV~PDI~tla--K~LgGG~PigA~la~~~~~~~~~~G~Hg 280 (404)
T COG4992 203 PPEFLKALRELCDEHGALLILDEVQTGLGRTGKLFAYEHYGVEPDILTLA--KALGGGFPIGAMLATEEIASAFTPGDHG 280 (404)
T ss_pred CHHHHHHHHHHHHHhCeEEEEeccccCCCccchHHHHHHhCCCCCEEEee--ccccCCccceeeEEchhhhhcCCCCccc
Confidence 789999999999999999999732 21 122234468999888 9 77767799999985444445554444
Q ss_pred CCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCC-Ch
Q psy8850 225 GGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFI-EG 303 (397)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 303 (397)
.+.|.++ ..+++..++++.+.+ +.+.++.+++.++|.+.|++....+.+..+ -...+.++=+.+... ..
T Consensus 281 ------STfGGNp-LacAv~~a~l~~l~~--e~ll~~v~~~g~~~~~~L~~l~~~~~~v~~-vRG~GLmiGiel~~~~~a 350 (404)
T COG4992 281 ------STFGGNP-LACAVALAVLEVLLE--EGLLENVREKGEYLLQRLRELKRRYPLVKE-VRGRGLMIGIELKEPYRA 350 (404)
T ss_pred ------CCCCcCH-HHHHHHHHHHHHHcc--hhHHHHHHHHHHHHHHHHHHHhhcCCceee-eecceeEEEEEecCcccH
Confidence 3444444 555555588888876 567778888888888888772222222221 111134444555533 35
Q ss_pred HHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHHHhc
Q psy8850 304 ESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKLREL 376 (397)
Q Consensus 304 ~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~ 376 (397)
.++...++ ++.+... +.+.||+.++..++++++++++++|.+++......
T Consensus 351 ~~~~~~~~~~gvL~~~a-----------------------~~~ViR~~PpL~i~~eei~~~~~~l~~~l~~~~~~ 402 (404)
T COG4992 351 RDIVRALREEGVLVLPA-----------------------GPNVIRFLPPLVITEEEIDEALDALERALAAASAR 402 (404)
T ss_pred HHHHHHHHHCCeEEecC-----------------------CCCeEEecCCccCCHHHHHHHHHHHHHHHHHhhhc
Confidence 77777776 7666543 13799999999999999999999999999877553
No 213
>PLN02509 cystathionine beta-lyase
Probab=99.94 E-value=1.7e-24 Score=203.99 Aligned_cols=304 Identities=16% Similarity=0.154 Sum_probs=205.6
Q ss_pred hhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHH-HhhCCcEE
Q psy8850 35 YGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRK-LENDGFRV 113 (397)
Q Consensus 35 ~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~-~~~~g~~v 113 (397)
+++...+...++++.++++.+.+ ..++++||+.|+.+++. +. ++||+|+++.+.|+++...+.. +...|.++
T Consensus 127 Y~r~gnpt~~aLE~~lA~leg~e--~ai~~~SG~aAi~~il~-ll----~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v 199 (464)
T PLN02509 127 YTRSGNPTRDALESLLAKLDKAD--RAFCFTSGMAALSAVTH-LI----KNGEEIVAGDDVYGGSDRLLSQVVPRSGVVV 199 (464)
T ss_pred cCCCCCHHHHHHHHHHHHHhCCC--EEEEeCcHHHHHHHHHH-Hh----CCCCEEEEcCCchhhHHHHHHHHHHHCCeEE
Confidence 33333457888999999999865 56777888888866554 55 7999999999999998766543 33458998
Q ss_pred EEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCccccccCcccccEEE
Q psy8850 114 TYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMS 193 (397)
Q Consensus 114 ~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~ 193 (397)
+.++.. |++++++++++++++|++++++||+|.+.|+++|+++|++||+++|+|++++.+..... ...++|+++
T Consensus 200 ~~vd~~-----d~e~l~~ai~~~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~a~~~~~~p-l~~gaDivv 273 (464)
T PLN02509 200 KRVNTT-----NLDEVAAAIGPQTKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSIMSPVLSRP-LELGADIVM 273 (464)
T ss_pred EEeCCC-----CHHHHHHhCCcCCeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCccccccCCh-hhcCCcEEE
Confidence 888643 78999999999999999999999999999999999999999999999999987764322 235899999
Q ss_pred ecccc-ccCCCC--ceEEEEecCCC-CccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8850 194 FSAHK-IYGPKG--IGALYIRRNPR-TRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRL 269 (397)
Q Consensus 194 ~s~~K-~~g~~g--~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l 269 (397)
+|++| +.|+.+ .|+++++++.. ..+...... ..+..+....+.+...++ .+..+.++..+++.++
T Consensus 274 ~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~~~~~-------~g~~l~p~~A~l~lr~L~----tL~~R~~r~~~nA~~l 342 (464)
T PLN02509 274 HSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNS-------EGSGLAPFDCWLCLRGIK----TMALRIEKQQENARKI 342 (464)
T ss_pred ecCcccccCCCccceeEEEeccHHHHHHHHHHHHh-------cCCCcCHHHHHHHHhhhh----hHHHHHHHHHHHHHHH
Confidence 99999 555444 58887765432 111111100 011122222222223333 3456778888889999
Q ss_pred HHHHhhhcCcEEEeCCCC--------------CCCCceEEEEecCCC-hHHHHHHhC--CcEecccCccCC----CCCCh
Q psy8850 270 YNGLMESIEEIYINGDMN--------------NRIPHNLNISFNFIE-GESLLMAIK--DIAVSSGSACTS----ASLEP 328 (397)
Q Consensus 270 ~~~l~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~-~~~~~~~l~--~i~~~~g~~~~~----~~~~~ 328 (397)
.+.|++ .|.+..+.-|+ ...++++.|.+.+.+ ...+.+.|+ .+...-|...+. ..+.+
T Consensus 343 a~~L~~-~p~V~~V~yPgL~~~p~~~l~~~~~~g~gg~~sf~~~~~~~~~~f~~~l~l~~~a~slG~~~SLi~~p~~~sh 421 (464)
T PLN02509 343 AMYLSS-HPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGSVALSKHLVETTKYFSIAVSFGSVKSLISMPCFMSH 421 (464)
T ss_pred HHHHhc-CCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEeCCHHHHHHHHHcCCcceEcccCCCCCceeeCCccccc
Confidence 999988 77764332211 134667788773211 345666666 444455543332 11211
Q ss_pred ----hhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHH
Q psy8850 329 ----SYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVK 371 (397)
Q Consensus 329 ----~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 371 (397)
....+..|+.+ +.||+|++. |++|.+++.|.++++
T Consensus 422 ~~~~~~~~~~~Gi~~----~liRlSvGl----E~~~DLi~Dl~~Al~ 460 (464)
T PLN02509 422 ASIPAEVREARGLTE----DLVRISAGI----EDVDDLISDLDIAFR 460 (464)
T ss_pred ccCCHHHHHhcCCCC----CeEEEEecc----CCHHHHHHHHHHHHc
Confidence 12234556654 899999997 567777777777664
No 214
>PRK08354 putative aminotransferase; Provisional
Probab=99.94 E-value=7.4e-24 Score=193.16 Aligned_cols=282 Identities=15% Similarity=0.052 Sum_probs=181.8
Q ss_pred CCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCE
Q psy8850 9 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKH 88 (397)
Q Consensus 9 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~ 88 (397)
+|+.+.+++.+.+.... .|. ....++++++++++ ++|++|+|+++|+.+++.. . .+||.
T Consensus 21 ~p~~~~~a~~~~~~~~~------~yp-------~~~~l~~~ia~~~~---~~I~vt~G~~~al~~~~~~-~----~~gd~ 79 (311)
T PRK08354 21 PPEWLDEMFERAKEISG------RYT-------YYEWLEEEFSKLFG---EPIVITAGITEALYLIGIL-A----LRDRK 79 (311)
T ss_pred CCHHHHHHHHHHHHHhh------cCC-------ChHHHHHHHHHHHC---CCEEECCCHHHHHHHHHHh-h----CCCCe
Confidence 46788888887765421 121 12457889999998 3699999999999987753 3 47899
Q ss_pred EEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccH---HHHHHHHHhc
Q psy8850 89 IITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPI---LEIGELCRSK 165 (397)
Q Consensus 89 vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l---~~i~~l~~~~ 165 (397)
|++..|+|+.+...++.. |.+++.++ +|++.++++++ +++++++++|+||||.+++. ++|+++|+++
T Consensus 80 vlv~~P~y~~~~~~~~~~---g~~~~~~~------~d~~~l~~~~~-~~~~vi~~~P~NPTG~~~~~~~l~~l~~~a~~~ 149 (311)
T PRK08354 80 VIIPRHTYGEYERVARFF---AARIIKGP------NDPEKLEELVE-RNSVVFFCNPNNPDGKFYNFKELKPLLDAVEDR 149 (311)
T ss_pred EEEeCCCcHHHHHHHHHc---CCEEeecC------CCHHHHHHhhc-CCCEEEEecCCCCCCCccCHHHHHHHHHHhhhc
Confidence 999999999999888877 88887654 57889988876 56788999999999999984 5677788999
Q ss_pred CcEEEEecccccCccccccCcccccEEEeccccccCCCC--ceEEEEecCCCCccccccccCCccccccCCCCchhHHHH
Q psy8850 166 GVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVG 243 (397)
Q Consensus 166 gi~livD~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (397)
|+++|+|++|............+..+++.|++|.+|.+| +|++++ ..+.+..... ....+..+..+
T Consensus 150 ~~~li~De~y~~f~~~~~~~~~~~vi~~~S~SK~~~l~GlRiG~~v~---~~~~l~~~~~---------~~~~~~~~~~~ 217 (311)
T PRK08354 150 NALLILDEAFIDFVKKPESPEGENIIKLRTFTKSYGLPGIRVGYVKG---FEEAFRSVRM---------PWSIGSTGYAF 217 (311)
T ss_pred CcEEEEeCcchhccccccccCCCcEEEEeccHhhcCCccceeeeeee---hHHHHHHcCC---------CccCCHHHHHH
Confidence 999999999963221111111245688999999777555 688776 2222222211 11222233333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCChHHHHHHhC--CcEecccCcc
Q psy8850 244 MGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAIK--DIAVSSGSAC 321 (397)
Q Consensus 244 l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~i~~~~g~~~ 321 (397)
+.+.++...+.+.+..+.+.+.++.+.+.+ .. ++. .+++.+.+. ++.++.+.+. ||.+.+|..|
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l--------~~-~~~---~~~~~~~~~--~~~~~~~~l~~~gv~v~~g~~f 283 (311)
T PRK08354 218 LEFLIEDDFEHLRKTMPLIWREKERFEKAL--------YV-KSD---ANFFIKDVG--DAEKFVEFLKRNGILVRDCTSF 283 (311)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHhc--------CC-CCC---CcEEEEECC--CHHHHHHHHHHCCeEEEecccC
Confidence 322222111122222222222222222221 11 111 334344433 4566777665 9999998654
Q ss_pred CCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHH
Q psy8850 322 TSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (397)
Q Consensus 322 ~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 369 (397)
.. ++++||+++ ..++.++++++|+++
T Consensus 284 ~~-------------------~~~iRi~~~---~~~~~~~l~~al~~~ 309 (311)
T PRK08354 284 GL-------------------PGYIRFSVR---DREENEKLIRALREW 309 (311)
T ss_pred CC-------------------CCeEEEEeC---CHHHHHHHHHHHHHh
Confidence 32 278999998 477888888888865
No 215
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.94 E-value=4.9e-24 Score=199.10 Aligned_cols=309 Identities=15% Similarity=0.111 Sum_probs=206.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHH-HhhCCcEEEEecc
Q psy8850 40 EKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRK-LENDGFRVTYLKP 118 (397)
Q Consensus 40 ~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~-~~~~g~~v~~v~~ 118 (397)
.+....+++.++++.|.. ..+.++||+.|+.+++.+++ ++||+||++.+.|.++...... +...|+++++++.
T Consensus 60 nPtv~~lE~~la~leg~~--~av~~~SG~aAi~~al~all----~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~ 133 (432)
T PRK06702 60 NPTLAAFEQKLAELEGGV--GAVATASGQAAIMLAVLNIC----SSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNP 133 (432)
T ss_pred CcHHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHhc----CCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECC
Confidence 356888999999999986 57889999999999999887 8999999999999988887655 3555999999965
Q ss_pred CCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCccccccCcccccEEEecccc
Q psy8850 119 KNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHK 198 (397)
Q Consensus 119 ~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~~s~~K 198 (397)
+ +|+++++++|+++|++|+++++.||++.+.|+++|+++|+++|+++++|++++.+... .....++|+++.|++|
T Consensus 134 ~----~d~~~l~~~I~~~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD~T~~tP~~~-~pl~~GADIvv~S~TK 208 (432)
T PRK06702 134 N----LTADEIVALANDKTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDNTLATPYLC-QAFEHGANIIVHSTTK 208 (432)
T ss_pred C----CCHHHHHHhCCcCCeEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEECCCCchhhC-ChhhcCCCEEEEcccc
Confidence 3 6899999999999999999999999999999999999999999999999998744321 2234589999999999
Q ss_pred -ccCCCC--ceEEEEecCCC-------Cccc---cccc---cCC----------c--cccccCCCCchhHHHHHHHHHHH
Q psy8850 199 -IYGPKG--IGALYIRRNPR-------TRIE---AQIH---GGG----------H--EYGLRSGTLATHQIVGMGEAFRL 250 (397)
Q Consensus 199 -~~g~~g--~g~~~~~~~~~-------~~~~---~~~~---~~~----------~--~~~~~~~~~~~~~~~~l~~al~~ 250 (397)
+.|..+ .|+++.+.... ..+. .... ... . ........++....+-+...|+
T Consensus 209 y~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~sp~~a~l~~rgL~- 287 (432)
T PRK06702 209 YIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAAAYIVKARVQLLRDYGNCMSPFNAYISNIGLE- 287 (432)
T ss_pred ccCCCcceeceEEEeCCCcccccccccccccccccccccchhhccchhhHHHHHHHHHHHHccCCCCHHHHHHHHhccC-
Confidence 444322 34444322110 0000 0000 000 0 0000011222222222222332
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCC---------------CCCCceEEEEecCC--ChHHHHHHhC--
Q psy8850 251 ARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMN---------------NRIPHNLNISFNFI--EGESLLMAIK-- 311 (397)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~--~~~~~~~~l~-- 311 (397)
.++.+.++..+++..+.+.|++ .|.+..+..|. ...++++.|.+++. ...++...|+
T Consensus 288 ---Tl~lR~~r~~~Na~~la~~L~~-~p~V~~V~yPgl~~~p~~~l~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l~l~ 363 (432)
T PRK06702 288 ---TLHLRMERHSENALAVAKWLAD-HERIEWVNYPGLDSNENYSLAQKYLKKGASGVLTFGIKGGLEAAKEFIANVKLA 363 (432)
T ss_pred ---cHHHHHHHHHHHHHHHHHHHHh-CCCcceEECCCCCCCccHHHHHHhCcCCCceEEEEEecCCHHHHHHHHHhCccc
Confidence 3556677778999999999998 77765443221 12467888888631 1235555555
Q ss_pred CcEecccCccC----CCCCChh----hHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHH
Q psy8850 312 DIAVSSGSACT----SASLEPS----YVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKK 372 (397)
Q Consensus 312 ~i~~~~g~~~~----~~~~~~~----~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 372 (397)
.+...-|..-+ |.++.++ ...+..|+.+ +.||+|++. |+.|.+++.|.++++-
T Consensus 364 ~~a~slGg~~Slv~~p~~~th~~~~~~~~~~~Gi~~----~liRlSvGl----Ed~eDLi~Dl~~Al~~ 424 (432)
T PRK06702 364 TLVTHVADARTCVIHPASTTHRQLSAEDQRLAGVTS----DLIRLSVGI----EDVSDIIADLEAALVG 424 (432)
T ss_pred eeccccCCCCcceECCCCCCcccCCHHHHHhcCCCC----CeEEEEecc----CCHHHHHHHHHHHHhc
Confidence 44444443222 2222221 1233455554 899999997 6778888888877653
No 216
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.94 E-value=3.2e-24 Score=201.82 Aligned_cols=316 Identities=17% Similarity=0.140 Sum_probs=207.6
Q ss_pred cchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHHhh-CCc
Q psy8850 33 HIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLEN-DGF 111 (397)
Q Consensus 33 ~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~-~g~ 111 (397)
+.+++...+...++++.|+++.|.+ ..++++||++|+.+++.++. ++||+|+++.+.|+++...+..... .|+
T Consensus 50 ~~y~r~~~pt~~~Le~~lA~l~g~~--~~l~~ssG~~Ai~~al~al~----~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi 123 (425)
T PRK06084 50 NIYTRIMNPTNDVLEQRVAALEGGV--GALAVASGMAAITYAIQTIA----EAGDNIVSVAKLYGGTYNLLAHTLPRIGI 123 (425)
T ss_pred ccccCCCCchHHHHHHHHHHHhCCC--ceeEehhHHHHHHHHHHHHh----CCCCEEEEeCCCcchHHHHHHHhccccee
Confidence 3344444566789999999999965 56788899999999999888 7899999999999977766654322 377
Q ss_pred EEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCccccccCcccccE
Q psy8850 112 RVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDL 191 (397)
Q Consensus 112 ~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~ 191 (397)
++..++.+ |++++++++++++++|++++++||+|.+.|+++|.++|+++|++||+|++++.+.... ....++|+
T Consensus 124 ~v~~~d~~-----d~e~le~ai~~~tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVvD~a~a~~~~~~-p~~~gaDi 197 (425)
T PRK06084 124 ETRFAAHD-----DIAALEALIDERTKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIVDNTVATPVLCR-PFEHGADI 197 (425)
T ss_pred EEEEECCC-----CHHHHHHHhccCCcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccCC-hhhcCCCE
Confidence 77777643 8999999999999999999999999999999999999999999999999999765432 23458999
Q ss_pred EEeccccccCCCC--ceEEEEe-cCC-CCcccccc----------ccCCccc----------------cccCCCCchhHH
Q psy8850 192 MSFSAHKIYGPKG--IGALYIR-RNP-RTRIEAQI----------HGGGHEY----------------GLRSGTLATHQI 241 (397)
Q Consensus 192 ~~~s~~K~~g~~g--~g~~~~~-~~~-~~~~~~~~----------~~~~~~~----------------~~~~~~~~~~~~ 241 (397)
+++|++|++++.| +|.+++. ... ........ .+..... .......+....
T Consensus 198 vv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~l~~~~a 277 (425)
T PRK06084 198 VVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHGVTYTEAFGPAAFIGRCRVVPLRNMGAALSPFNA 277 (425)
T ss_pred EEECchhcccccccceeEEEEeCCccchhhccccccccccCCcccccchhhhhcchHHHHHHHHHHHHHhcCCCCCHHHH
Confidence 9999999554333 3444443 321 11110000 0000000 000001111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCC--------------CC-CCceEEEEecCC--ChH
Q psy8850 242 VGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMN--------------NR-IPHNLNISFNFI--EGE 304 (397)
Q Consensus 242 ~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~--------------~~-~~~~~~~~~~~~--~~~ 304 (397)
+.+...+ +.+..+.++..+++..+.+.|++ .|.+..+.-|. .. .++++.|.+++. ...
T Consensus 278 ~l~lrgl----~tl~~R~~~~~~na~~la~~L~~-~p~v~~V~yP~l~~~p~~~~~~~~~~g~~gg~~s~~~~~~~~~~~ 352 (425)
T PRK06084 278 FLILQGL----ETLALRMERHTENALKVARYLQQ-HPQVAWVKYAGLPDHPEHELARRYMGGKPASILSFGIKGGQAAGA 352 (425)
T ss_pred HHHHcCc----CcHHHHHHHHHHHHHHHHHHHHh-CCCccEEECCCCCCcccHHHHHHhCCCCcceEEEEEecCCHHHHH
Confidence 1111111 13667788888999999999998 77764332211 12 466888888642 134
Q ss_pred HHHHHhC--CcEecccCccCC----CCCCh----hhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHH
Q psy8850 305 SLLMAIK--DIAVSSGSACTS----ASLEP----SYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 305 ~~~~~l~--~i~~~~g~~~~~----~~~~~----~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 373 (397)
++.+.|+ .+...-|...+. ..+.+ ....+..|+.+ +.||||++. ||.|.+++.|.+++...
T Consensus 353 ~f~~~l~l~~~~~slG~~~slv~~p~~~~h~~~~~~~~~~~gi~~----~liR~svGl----Ed~~dLi~dl~~Al~~~ 423 (425)
T PRK06084 353 RFIDALKLVVRLVNIGDAKSLACHPASTTHRQLNDEELEKAGVSR----DMVRLSIGI----EHIDDIIADLAQALDAS 423 (425)
T ss_pred HHHHhCCcceeccccCCCceeeeCCCcCCcccCCHHHHHhcCCCC----CeEEEEecc----CCHHHHHHHHHHHHHhh
Confidence 5666665 344444544332 22211 12344566664 899999997 67778888888877654
No 217
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.94 E-value=1.4e-24 Score=200.75 Aligned_cols=308 Identities=14% Similarity=0.091 Sum_probs=206.9
Q ss_pred cchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHH-HHhhCCc
Q psy8850 33 HIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIR-KLENDGF 111 (397)
Q Consensus 33 ~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~-~~~~~g~ 111 (397)
|.+++...+....+++.++.+-+.+ ..++++||+.|+.+++.++. ++||+|+++++.|+++...+. .+.+.|+
T Consensus 56 y~YsR~gnPt~~~Le~~la~le~~~--~~v~~sSG~aAi~~~l~all----~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi 129 (395)
T PRK05967 56 YTYGTRGTPTTDALCKAIDALEGSA--GTILVPSGLAAVTVPFLGFL----SPGDHALIVDSVYYPTRHFCDTMLKRLGV 129 (395)
T ss_pred CccCCCCChHHHHHHHHHHHHhCCC--CEEEECcHHHHHHHHHHHhc----CCCCEEEEccCCcHHHHHHHHHHHHhcCe
Confidence 4444556677888999999888755 34666668999999999887 899999999999999887653 3455599
Q ss_pred EEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCccccccCcccccE
Q psy8850 112 RVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDL 191 (397)
Q Consensus 112 ~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~ 191 (397)
++..++.+ +.+.++++++++|++|++++|+||++.+.|+++|+++||++|+++++|++++.+.. .....+++|+
T Consensus 130 ~v~~vd~~-----~~e~l~~al~~~TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD~t~a~p~~-~~pl~~GaDi 203 (395)
T PRK05967 130 EVEYYDPE-----IGAGIAKLMRPNTKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMDNTWATPLY-FRPLDFGVDI 203 (395)
T ss_pred EEEEeCCC-----CHHHHHHhcCcCceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEECCccCcee-cChhHcCCCE
Confidence 99998654 45789999999999999999999999999999999999999999999999986532 2344569999
Q ss_pred EEeccccccCCCC---ceEEEEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8850 192 MSFSAHKIYGPKG---IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKR 268 (397)
Q Consensus 192 ~~~s~~K~~g~~g---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~ 268 (397)
++.|.+|+.++.+ .|++..+++..+.+..... ......+....+.+...++ .+.-+.++..+++..
T Consensus 204 vv~S~tKy~~Gh~d~~~G~v~~~~~~~~~l~~~~~-------~~G~~~~p~da~l~~rgl~----Tl~lR~~~~~~na~~ 272 (395)
T PRK05967 204 SIHAATKYPSGHSDILLGTVSANEKCWPQLLEAHG-------TLGLCAGPDDTYQILRGLR----TMGIRLEHHRKSALE 272 (395)
T ss_pred EEEecccccCCCCCeeEEEEEcCHHHHHHHHHHHH-------HcCCCCCHHHHHHHHcCcc----cHHHHHHHHHHHHHH
Confidence 9999999644433 5666655433222221111 1112333333333323333 345567777888888
Q ss_pred HHHHHhhhcCcEEEeCCCC--------------CCCCceEEEEecCC---C---hHHHHHHhC--CcEecccCccCCC--
Q psy8850 269 LYNGLMESIEEIYINGDMN--------------NRIPHNLNISFNFI---E---GESLLMAIK--DIAVSSGSACTSA-- 324 (397)
Q Consensus 269 l~~~l~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~---~---~~~~~~~l~--~i~~~~g~~~~~~-- 324 (397)
+.+.|++ .|.+..+.-|+ ...++++.|.+++. + ..++.+.|+ .+...-|...+..
T Consensus 273 lA~~L~~-hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~~~~f~~~l~l~~~~~slG~~~sLi~~ 351 (395)
T PRK05967 273 IARWLEG-RPDVARVLHPALPSFPGHEIWKRDFSGASGIFSFVLAAGPEKGKAKAHAFLDALEIFGLGYSWGGYESLALH 351 (395)
T ss_pred HHHHHHh-CCCCcEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCCcccHHHHHHHHHhCCcceEccCCCCcceeeee
Confidence 8888888 66653221111 13467888888632 2 345666665 3444445443321
Q ss_pred -CCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHH
Q psy8850 325 -SLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 325 -~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 373 (397)
.+.+. .....|+. ++.||||++. |+.|.+++.|.++++.+
T Consensus 352 ~~~~~~-~~~~~~~~----~~liRlSvGl----Ed~~dLi~Dl~~Al~~~ 392 (395)
T PRK05967 352 VKLGDR-TVAKAPYA----GPVIRLQIGL----EDVPDLKADLERGFAAA 392 (395)
T ss_pred CCCChh-HhhhccCC----CCeEEEEecc----CCHHHHHHHHHHHHHhh
Confidence 11111 11122333 3799999997 56777777777776543
No 218
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.94 E-value=7.6e-24 Score=198.65 Aligned_cols=333 Identities=16% Similarity=0.152 Sum_probs=219.6
Q ss_pred CCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHh-HhhhccCCC
Q psy8850 9 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGA-AHFYKKRGK 87 (397)
Q Consensus 9 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l-~~~~~~~g~ 87 (397)
.+++.++++.+.+.... +.. .+...++++.+++++|.+ +.++++|||+|+.+++.++ . ++||
T Consensus 8 ~~~~~~~~v~~~~~~~~-------~~~----g~~~~~le~~la~~~g~~--~~v~~~sgt~al~~~l~al~~----~~Gd 70 (380)
T TIGR03588 8 IDQDDIDAVVEVLKSDF-------LTQ----GPTVPAFEEALAEYVGAK--YAVAFNSATSALHIACLALGV----GPGD 70 (380)
T ss_pred CCHHHHHHHHHHHhcCC-------ccC----ChhHHHHHHHHHHHHCCC--eEEEEcCHHHHHHHHHHHcCC----CCCC
Confidence 35666888888775421 111 234688999999999986 4566778999999999987 4 7899
Q ss_pred EEEEcCCCChhhHHHHHHHhhCCcEEEEeccC-CCCCCCHHHHHHHhc----CCceEEEEecccCcccccccHHHHHHHH
Q psy8850 88 HIITVQTEHKSVLDSIRKLENDGFRVTYLKPK-NNGLITLSQLEEKIC----SDTILVSVMLVNNEIGVIQPILEIGELC 162 (397)
Q Consensus 88 ~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~-~~~~~d~~~l~~~i~----~~~~~v~~~~~~~~tG~~~~l~~i~~l~ 162 (397)
+|+++.++|.++..++... |.+++.++++ +++.+|+++++++++ +++++|++++ ++|...|+++|.++|
T Consensus 71 ~Viv~~~~~~~~~~~~~~~---G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~~~---~~G~~~~~~~i~~l~ 144 (380)
T TIGR03588 71 RVWTTPITFVATANCALYC---GAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVPVD---FAGKSVDMQAIAALA 144 (380)
T ss_pred EEEeCCcchHHHHHHHHHc---CCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEEeC---CCCccCCHHHHHHHH
Confidence 9999999999998777666 9999999996 467899999999998 7889888655 589999999999999
Q ss_pred HhcCcEEEEecccccCccccccCcccc----cEEEeccc--cccCCCCceEEEEecC-CCCccccccccCCcc-------
Q psy8850 163 RSKGVIFHCDAAQAVGKIDINIQNYKV----DLMSFSAH--KIYGPKGIGALYIRRN-PRTRIEAQIHGGGHE------- 228 (397)
Q Consensus 163 ~~~gi~livD~a~~~~~~~~~~~~~~~----d~~~~s~~--K~~g~~g~g~~~~~~~-~~~~~~~~~~~~~~~------- 228 (397)
++||++||+|++|+.|.. ++...++. |+.++|+| |+++....|+++.+++ ..++++.....+...
T Consensus 145 ~~~~~~lI~D~a~a~g~~-~~~~~~g~~~~~d~~~~S~~~~K~~~~~~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 223 (380)
T TIGR03588 145 KKHGLKIIEDASHALGAE-YGGKPVGNCRYADATVFSFHPVKIITTAEGGAVTTNDEELAERMRLLRSHGITKDPLLFEK 223 (380)
T ss_pred HHcCCEEEEECCCcccCc-cCCEeCCCccccceEEEecCCCCcccccCceEEEECCHHHHHHHHHHHHCCCCCCcccccc
Confidence 999999999999998865 34444455 99999988 7444323466666533 333333221111000
Q ss_pred -----ccccCCCCch-hHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCC--CCCceEEEEec
Q psy8850 229 -----YGLRSGTLAT-HQIVGMGEAFRLA-RIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNN--RIPHNLNISFN 299 (397)
Q Consensus 229 -----~~~~~~~~~~-~~~~~l~~al~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~ 299 (397)
..+..+.... ..+-.+.+++... .+.++++.++.+++.+++.+.|.+ ++++.+...+.. ..+....+.++
T Consensus 224 ~~~~~~~~~~~~~g~n~~m~~l~aa~g~~qL~~l~~~~~~r~~~~~~~~~~L~~-~~~~~~~~~~~~~~~~~~~~~i~~~ 302 (380)
T TIGR03588 224 QDEGPWYYEQQELGFNYRMTDIQAALGLSQLKKLDRFVAKRREIAARYDRLLKD-LPYFTPLTIPLGSKSAWHLYPILLD 302 (380)
T ss_pred cccCcceeeeeccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCCccCCCCCCCCEeEEEEEEEEEC
Confidence 0011111000 0111112222111 124677888889999999999988 776654433211 11234444554
Q ss_pred C---CChHHHHHHhC--CcEecccCccCCCCCChhhHHHhh-C-----CCccccCceEEEeeCCCCCHHHHHHHHHHHHH
Q psy8850 300 F---IEGESLLMAIK--DIAVSSGSACTSASLEPSYVLRAL-G-----CNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 368 (397)
Q Consensus 300 ~---~~~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~-g-----~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~ 368 (397)
. .+..++.+.|. ||.+... +.+....+ ..+.. + .........|++++....+++||+++++.|++
T Consensus 303 ~~~~~~r~~l~~~L~~~gI~~~~~--~~~~~~~~--~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~dv~~i~~~l~~ 378 (380)
T TIGR03588 303 QEFGCTRKEVFEALRAAGIGVQVH--YIPVHLQP--YYRQGFGDGDLPSAENFYLAEISLPLHPALTLEQQQRVVETLRK 378 (380)
T ss_pred CcCCCCHHHHHHHHHHCCCCcccC--CcccccCh--hhhccCCcCCCcHHHHHHhceEEcCCCCCCCHHHHHHHHHHHHH
Confidence 2 35678888887 7766643 22211111 11110 0 01123357899999998999999999999987
Q ss_pred HH
Q psy8850 369 KV 370 (397)
Q Consensus 369 ~~ 370 (397)
++
T Consensus 379 ~~ 380 (380)
T TIGR03588 379 VL 380 (380)
T ss_pred hC
Confidence 63
No 219
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.94 E-value=3.7e-24 Score=202.25 Aligned_cols=316 Identities=16% Similarity=0.138 Sum_probs=211.3
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCC-CCcEEEeCChhHHHHHHHHHhHhhhccC
Q psy8850 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYAD-PREIIWTSGATESNNLAIKGAAHFYKKR 85 (397)
Q Consensus 7 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~-~~~i~~~~g~t~a~~~~l~~l~~~~~~~ 85 (397)
++.+|.+.+++.+++.... .... .+. .....++.+.++++++.+ ++++++++||++|+..+++.+.. ..
T Consensus 58 G~~~p~v~~ai~~~~~~~~-~~~~-~~~-----~~~~~~la~~l~~~~~~~~~~~v~~~~sgsea~~~al~~~~~---~g 127 (398)
T PRK03244 58 GHAHPAVVEAVTRQLATLG-HVSN-LFA-----TEPQIALAERLVELLGAPEGGRVFFCNSGAEANEAAFKLARL---TG 127 (398)
T ss_pred CCCCHHHHHHHHHHHHhcc-CccC-ccC-----CHHHHHHHHHHHHhCCCCCCCEEEEeCchHHHHHHHHHHHHH---HC
Confidence 3457999999999987632 1111 111 223468899999998854 46899999999999999997663 12
Q ss_pred CCEEEEcCCCChhhHHHHHHHhhC----------CcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCccccccc-
Q psy8850 86 GKHIITVQTEHKSVLDSIRKLEND----------GFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP- 154 (397)
Q Consensus 86 g~~vl~~~~~~~s~~~~~~~~~~~----------g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~- 154 (397)
+++|+..+++|++.......+... +.++..+|. .|++++++.+.+++++|+++.++||+|.+.|
T Consensus 128 ~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~~~~~~~aviiep~~~~~G~~~~~ 202 (398)
T PRK03244 128 RTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPY-----GDVDALAAAVDDDTAAVFLEPIQGEAGVVPPP 202 (398)
T ss_pred CCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCC-----CCHHHHHHhhcCCeEEEEEecccCCCCCcCCC
Confidence 356666666666664433322110 112333333 3789999999888999999999999999988
Q ss_pred ---HHHHHHHHHhcCcEEEEeccccc-Ccc----ccccCcccccEEEecccc-ccCCCCceEEEEecCCCCccccccccC
Q psy8850 155 ---ILEIGELCRSKGVIFHCDAAQAV-GKI----DINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEAQIHGG 225 (397)
Q Consensus 155 ---l~~i~~l~~~~gi~livD~a~~~-~~~----~~~~~~~~~d~~~~s~~K-~~g~~g~g~~~~~~~~~~~~~~~~~~~ 225 (397)
+++|.++|++||+++|+|++|+. |.. ........+|++++| | +.++.++|+++.+++..+.+.....+
T Consensus 203 ~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pDi~t~s--K~l~~G~~ig~~~~~~~~~~~~~~~~~~- 279 (398)
T PRK03244 203 AGYLAAAREITDRHGALLVLDEVQTGIGRTGAWFAHQHDGVTPDVVTLA--KGLGGGLPIGACLAFGPAADLLTPGLHG- 279 (398)
T ss_pred HHHHHHHHHHHHHcCCEEEEeccccCCcccchHHhhhhhCCCCCEEEEc--hhhhCCcccEEEEEcHHHHhhccCCCCc-
Confidence 78999999999999999999862 211 112233457877665 9 54444589999987655544332111
Q ss_pred CccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCChHH
Q psy8850 226 GHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGES 305 (397)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (397)
...+ .+...+.+..++++.+.+ .++.+++.++.++|++.|++ +. ..+..... ..+.++.+.++......
T Consensus 280 -----~t~~-~~~~~~aaa~a~l~~~~~--~~~~~~~~~~~~~l~~~L~~-~~-~~~~~~v~-g~g~~~~i~~~~~~~~~ 348 (398)
T PRK03244 280 -----STFG-GNPVACAAALAVLDTIAS--EGLLENAERLGEQLRAGIEA-LG-HPLVDHVR-GRGLLLGIVLTAPVAKA 348 (398)
T ss_pred -----CCCC-CCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHh-cC-CCceeeEe-eccEEEEEEEeccHHHH
Confidence 1222 334455555577776554 35678888889999999987 42 22111110 12556677775433456
Q ss_pred HHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHHH
Q psy8850 306 LLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKLR 374 (397)
Q Consensus 306 ~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 374 (397)
+...+. |+.+.+. ..+.||++++..++++||++++++|++++.+++
T Consensus 349 ~~~~l~~~Gv~~~~~-----------------------~~~~iR~~p~~~~t~~~i~~~~~~l~~~l~~~~ 396 (398)
T PRK03244 349 VEAAAREAGFLVNAV-----------------------APDVIRLAPPLIITDAQVDAFVAALPAILDAAA 396 (398)
T ss_pred HHHHHHHCCeEEeec-----------------------CCCEEEEECCCcCCHHHHHHHHHHHHHHHHhcc
Confidence 666665 7777642 127899999998999999999999999997654
No 220
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.94 E-value=5.8e-24 Score=200.60 Aligned_cols=307 Identities=13% Similarity=0.118 Sum_probs=204.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHH-HhhCCcEEEEecc
Q psy8850 40 EKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRK-LENDGFRVTYLKP 118 (397)
Q Consensus 40 ~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~-~~~~g~~v~~v~~ 118 (397)
.+....+++.++++.|.+ ..++++||+.|+.+++.++. ++||+|+++.+.|+++...+.. +...|++++.++.
T Consensus 62 ~p~~~~le~~lA~l~g~~--~al~~~SG~~Ai~~al~all----~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 135 (427)
T PRK05994 62 NPTNAVLEERVAALEGGT--AALAVASGHAAQFLVFHTLL----QPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADA 135 (427)
T ss_pred CccHHHHHHHHHHHhCCC--cEEEEcCHHHHHHHHHHHHh----CCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECC
Confidence 456788999999999987 47788999999999999887 7999999999999988766544 3445999999886
Q ss_pred CCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCccccccCcccccEEEecccc
Q psy8850 119 KNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHK 198 (397)
Q Consensus 119 ~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~~s~~K 198 (397)
+ |++++++++++++++|++++++||+|.+.|+++|.++|+++|+++|+|++++.+... +...+++|+++.|++|
T Consensus 136 ~-----d~~~l~~ai~~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~a~a~~~~~-~pl~~gaDivv~S~tK 209 (427)
T PRK05994 136 D-----DPASFERAITPRTKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVDNTLASPYLI-RPIEHGADIVVHSLTK 209 (427)
T ss_pred C-----CHHHHHHhcCcCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCccccccC-CccccCCcEEEEcCcc
Confidence 4 799999999999999999999999999999999999999999999999999866543 2334689999999999
Q ss_pred ccCCCC--ceEEEEecCCCCccc----ccccc---C---C-cc----------------ccccCCCCchhHHHHHHHHHH
Q psy8850 199 IYGPKG--IGALYIRRNPRTRIE----AQIHG---G---G-HE----------------YGLRSGTLATHQIVGMGEAFR 249 (397)
Q Consensus 199 ~~g~~g--~g~~~~~~~~~~~~~----~~~~~---~---~-~~----------------~~~~~~~~~~~~~~~l~~al~ 249 (397)
++|+.| +|.+++......... +.+.. + . .. .+......+....+.+...+
T Consensus 210 ~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~~l- 288 (427)
T PRK05994 210 FLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPRPEYHGLVLHETFGNFAFAIAARVLGLRDLGPAISPFNAFLILTGI- 288 (427)
T ss_pred ccCCCCCcEEEEEEeCCccccccccccccccCCcchhhhhhHHHHhhhhhhHHHHHHHHHHhcCCCCCHHHHHHHHcCc-
Confidence 555433 454444311111000 00000 0 0 00 00000111111111111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCC---------------CCCCceEEEEecCC--ChHHHHHHhC-
Q psy8850 250 LARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMN---------------NRIPHNLNISFNFI--EGESLLMAIK- 311 (397)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~--~~~~~~~~l~- 311 (397)
+.++.+.++..+++..+.+.|++ .|.+..+..|. ...++++.|.+++. ...++.+.|+
T Consensus 289 ---~tL~~r~~~~~~~a~~la~~L~~-~p~v~~v~yP~l~~~~~~~~~~~~~~~g~g~~~sf~l~~~~~~~~~~~~~l~l 364 (427)
T PRK05994 289 ---ETLPLRMQRHSDNALAVAEWLKG-HPKVSWVNYAGLPDDPYHALAQKYSPKGAGAVFTFGLKGGYEAGVKLVSSLKL 364 (427)
T ss_pred ---ccHHHHHHHHHHHHHHHHHHHHh-CCCccEEECCCCCCCccHHHHHHhcCCCceEEEEEEecCCHHHHHHHHHhCCc
Confidence 13666788888889999999988 77764332221 23466788888631 1335555555
Q ss_pred -CcEecccCccCC----CCCChh----hHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHH
Q psy8850 312 -DIAVSSGSACTS----ASLEPS----YVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVK 371 (397)
Q Consensus 312 -~i~~~~g~~~~~----~~~~~~----~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 371 (397)
.+..+.|...+. ..+.+. ...+..|+.+ +.||+|++. |+.|.+++.|.++++
T Consensus 365 ~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~----~liRlsvGl----E~~~dli~dl~~Al~ 425 (427)
T PRK05994 365 FSHLANIGDTRSLVIHPASTTHRQLTDEQKVAAGAGP----DVVRLSIGI----EDVDDIIADLEQALA 425 (427)
T ss_pred ceeccccCCCcceeeCCCCCCcccCCHHHHHhcCCCC----CcEEEEecc----CCHHHHHHHHHHHHh
Confidence 444455554432 222221 1223455554 899999997 667777777777765
No 221
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.94 E-value=2.2e-23 Score=210.69 Aligned_cols=306 Identities=13% Similarity=0.159 Sum_probs=211.1
Q ss_pred HHHHHHHHHHHHHHHhCCCCCcEEEeC-ChhHHHHHHHHHhHhhhccCC----CEEEEcCCCChhhHHHHHHHhhCCcEE
Q psy8850 39 AEKAIEKARNEVAQLIYADPREIIWTS-GATESNNLAIKGAAHFYKKRG----KHIITVQTEHKSVLDSIRKLENDGFRV 113 (397)
Q Consensus 39 ~~~~~~~~~~~la~~~~~~~~~i~~~~-g~t~a~~~~l~~l~~~~~~~g----~~vl~~~~~~~s~~~~~~~~~~~g~~v 113 (397)
.-+.+.++++++++++|.+ ++.+.+ |+++|..+.+.++.....++| ++|++++..|+++..++..+ |+++
T Consensus 540 ~l~~i~e~q~~l~eltG~d--~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~---G~~v 614 (954)
T PRK05367 540 YRELIDQLEAWLAEITGYD--AVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMA---GMKV 614 (954)
T ss_pred HHHHHHHHHHHHHHHHCCC--CEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHC---CCEE
Confidence 4478889999999999987 566655 555666555554443222333 47999999999998887776 9999
Q ss_pred EEeccCCCCCCCHHHHHHHhcC---CceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCccccc-cCcccc
Q psy8850 114 TYLKPKNNGLITLSQLEEKICS---DTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDIN-IQNYKV 189 (397)
Q Consensus 114 ~~v~~~~~~~~d~~~l~~~i~~---~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~-~~~~~~ 189 (397)
+.++++.+|.+|+++|++++++ ++.+|+++++++.++...|+++|+++||++|+++++|+++..+...+. ...+++
T Consensus 615 v~v~~d~~G~iD~~~L~~~i~~~~~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~~pg~~GA 694 (954)
T PRK05367 615 VVVACDENGNIDLDDLRAKAEEHADNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMNAQVGLARPGDIGA 694 (954)
T ss_pred EEECCCCCCCcCHHHHHHHHhccCCCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChhhccCCCChhhcCC
Confidence 9999998899999999999965 477888888887755568899999999999999999999986644332 335689
Q ss_pred cEEEecccc-cc-----CCCCceEEEEecCCCCccccccccCCccc-ccc--CCCCc---hhHHHH---HHHHHHHH-HH
Q psy8850 190 DLMSFSAHK-IY-----GPKGIGALYIRRNPRTRIEAQIHGGGHEY-GLR--SGTLA---THQIVG---MGEAFRLA-RI 253 (397)
Q Consensus 190 d~~~~s~~K-~~-----g~~g~g~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~---~~~~~~---l~~al~~~-~~ 253 (397)
|++++|+|| ++ |++|+|++++++++. +++.+..... ... .|... +.+... .+..+..+ .+
T Consensus 695 Di~~~s~HK~f~~P~G~GGPg~G~l~vr~~l~----p~lpg~~v~~~~~~~~~g~v~ta~~g~al~~~~a~~yi~~~G~~ 770 (954)
T PRK05367 695 DVSHLNLHKTFCIPHGGGGPGVGPIGVKAHLA----PFLPGHPVQIAGGETGIGAVSAAPFGSASILPISWMYIRMMGAE 770 (954)
T ss_pred CEEEecCcccCCCCcCCCCCceEEEeeccccc----ccCCCCccCcCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHCHH
Confidence 999999999 53 444577999985433 3333322100 000 11222 111111 12223322 45
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEec------CCChHHHHHHhC--CcEecccCccCCCC
Q psy8850 254 EMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN------FIEGESLLMAIK--DIAVSSGSACTSAS 325 (397)
Q Consensus 254 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~--~i~~~~g~~~~~~~ 325 (397)
++.+..+....+++++.+.|++ ...+...++.. ...+-+.+.++ +.+..++.++|. |+....-. .+
T Consensus 771 Glr~~a~~~~~~A~Yl~~~L~~-~~~~~~~~~~~-~~~~e~i~~~~~~~~~~g~~~~di~krL~d~G~~~~t~~--~p-- 844 (954)
T PRK05367 771 GLRQATEVAILNANYIAKRLKD-HYPVLYTGANG-RVAHECILDLRPLKESTGITVDDIAKRLIDYGFHAPTMS--FP-- 844 (954)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-hcCccccCCCC-CcccceEEEeecccccCCCCHHHHHHHHHHCCCeEeecC--Cc--
Confidence 6888888888999999999988 33333333211 11233445443 245678888876 55443211 11
Q ss_pred CChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHHHh
Q psy8850 326 LEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKLRE 375 (397)
Q Consensus 326 ~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 375 (397)
..+.+||+++.+++++|+|+++++|..+.+++.+
T Consensus 845 ----------------v~~~l~i~ptE~~s~~elDr~~~al~~i~~e~~~ 878 (954)
T PRK05367 845 ----------------VAGTLMVEPTESESKAELDRFCDAMIAIRAEIDE 878 (954)
T ss_pred ----------------cCCEEEEEeeecCCHHHHHHHHHHHHHHHHHHHH
Confidence 0378999999999999999999999999999988
No 222
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.94 E-value=3e-24 Score=197.66 Aligned_cols=272 Identities=15% Similarity=0.069 Sum_probs=192.8
Q ss_pred HHHHHHHHHHhCCC-CCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCC
Q psy8850 44 EKARNEVAQLIYAD-PREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNG 122 (397)
Q Consensus 44 ~~~~~~la~~~~~~-~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~ 122 (397)
.++++.+++++|.+ +++|++|+|+++++.++.. +. ++|+ |++..|+|+.+...++.. |.+++.++.+.
T Consensus 56 ~~L~~~ia~~~~~~~~~~I~i~~Gs~e~i~~l~~-~~----~~g~-v~v~~P~y~~y~~~~~~~---g~~~~~v~~~~-- 124 (339)
T PRK06959 56 DGLAACAARYYGAPDAAHVLPVAGSQAAIRALPA-LL----PRGR-VGIAPLAYSEYAPAFARH---GHRVVPLDEAA-- 124 (339)
T ss_pred HHHHHHHHHHhCCCCcccEEECcCHHHHHHHHHH-hc----CCCe-EEEcCCCcHHHHHHHHHC---CCEEEeecccc--
Confidence 78999999999996 4899999999999987654 44 5666 888999999999888877 99998887653
Q ss_pred CCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHH---HHhcCcEEEEecccccCccccccC---cccccEEEecc
Q psy8850 123 LITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGEL---CRSKGVIFHCDAAQAVGKIDINIQ---NYKVDLMSFSA 196 (397)
Q Consensus 123 ~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l---~~~~gi~livD~a~~~~~~~~~~~---~~~~d~~~~s~ 196 (397)
+. +.+.++++++++|+||||.+++.+++.++ |+++++++|+|++|.-......+. ..+..+++.|+
T Consensus 125 ----~~----~~~~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~~s~~~~~~~~~vi~l~Sf 196 (339)
T PRK06959 125 ----DT----LPAALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPAASLAAHTDRPGLVVLRSV 196 (339)
T ss_pred ----hh----ccccCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCcccchhccCCCCEEEEecC
Confidence 22 23356789999999999999997665554 567899999999988432111111 12335888999
Q ss_pred ccccCCCC--ceEEEEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy8850 197 HKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLM 274 (397)
Q Consensus 197 ~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~ 274 (397)
+|.+|.+| +|+++++++..+.+...... ...+.....+..++++. .+..++.++++.+.++++.+.|+
T Consensus 197 SK~~gl~GlRiGy~v~~~~li~~l~~~~~~---------~~vs~~~q~a~~~~L~~-~~~~~~~~~~~~~~r~~l~~~L~ 266 (339)
T PRK06959 197 GKFFGLAGVRAGFVLAAPALLAALRDALGA---------WTVSGPARHAVRAAFAD-AAWQAAMRERLAADGARLAALLR 266 (339)
T ss_pred hhhcCCcchheEEEecCHHHHHHHHHhcCC---------CCCcHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99777555 79999887666655443321 11233444444455542 23466778999999999999999
Q ss_pred hhcCcEEEeCCCCCCCCceEEEEecCCChHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCC
Q psy8850 275 ESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGR 352 (397)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~ 352 (397)
+ + ++.+.. . +.++++.++ +..++.+.|. ||.++. |.. .+++||+++.
T Consensus 267 ~-~-g~~~~~--~---~~f~~~~~~--~~~~l~~~l~~~GI~vr~---~~~-------------------~~~lRisi~~ 315 (339)
T PRK06959 267 A-H-GFAVHA--T---PLFSWTDDP--RAAALHAALARRGIWTRY---FAP-------------------PPSVRFGLPA 315 (339)
T ss_pred H-C-CCCccC--c---ceEEEEeCC--CHHHHHHHHHhCCeEEEE---CCC-------------------CCeEEEECCC
Confidence 8 4 554432 1 344455543 4567777775 888852 211 2689999953
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhcC
Q psy8850 353 FTTEKEIDFTIKLLKMKVKKLRELS 377 (397)
Q Consensus 353 ~~~~~~i~~~~~~l~~~~~~~~~~~ 377 (397)
+.+++++++++|+++++.+...+
T Consensus 316 --~~~e~~~l~~al~~~~~~~~~~~ 338 (339)
T PRK06959 316 --DEAEWQRLEDALAECVPTLAAAS 338 (339)
T ss_pred --CHHHHHHHHHHHHHHHHHHhhcc
Confidence 67899999999999988776543
No 223
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.94 E-value=1.2e-24 Score=202.23 Aligned_cols=306 Identities=16% Similarity=0.140 Sum_probs=203.9
Q ss_pred CcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHH-HhhCC
Q psy8850 32 NHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRK-LENDG 110 (397)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~-~~~~g 110 (397)
.+.+++...+...++++.++++.|.+. .++++||++|+.+++ .+. ++||+|+++++.|+++...+.. +...|
T Consensus 43 ~~~y~r~~~pt~~~le~~la~l~g~~~--~~~~~sG~~ai~~~~-~ll----~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G 115 (366)
T PRK08247 43 GFDYSRTGNPTRGVLEQAIADLEGGDQ--GFACSSGMAAIQLVM-SLF----RSGDELIVSSDLYGGTYRLFEEHWKKWN 115 (366)
T ss_pred CccccCCCCchHHHHHHHHHHHhCCCc--EEEEcCHHHHHHHHH-HHh----CCCCEEEEecCCcCcHHHHHHHHhhccC
Confidence 355566666788999999999999974 477888899998765 455 6899999999999987766654 33459
Q ss_pred cEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCccccccCccccc
Q psy8850 111 FRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVD 190 (397)
Q Consensus 111 ~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d 190 (397)
++++.++.. |++++++++++++++|++++|+||+|.+.++++|+++|+++|+++|+|++++.+...... ..+.|
T Consensus 116 ~~v~~vd~~-----d~~~l~~~i~~~tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD~t~~~~~~~~p~-~~g~d 189 (366)
T PRK08247 116 VRFVYVNTA-----SLKAIEQAITPNTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFYTPVLQRPL-EEGAD 189 (366)
T ss_pred ceEEEECCC-----CHHHHHHhcccCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccccCch-hcCCc
Confidence 999988763 899999999999999999999999999999999999999999999999999755432222 34789
Q ss_pred EEEecccc-ccCCCC--ceEEEEec-CCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8850 191 LMSFSAHK-IYGPKG--IGALYIRR-NPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQ 266 (397)
Q Consensus 191 ~~~~s~~K-~~g~~g--~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~ 266 (397)
+++.|++| +.|..+ .|+++.++ +....+...... .....+....+.....++ .+..+.++.++++
T Consensus 190 i~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~~~-------~g~~~s~~~a~l~~~~l~----tl~~r~~~~~~~a 258 (366)
T PRK08247 190 IVIHSATKYLGGHNDVLAGLVVAKGQELCERLAYYQNA-------AGAVLSPFDSWLLIRGMK----TLALRMRQHEENA 258 (366)
T ss_pred EEEeecceeccCCCceeeeEEecChHHHHHHHHHHHHh-------cCCCCChHHHHHHHhccC----cHHHHHHHHHHHH
Confidence 99999999 444433 47777653 233333222111 011222222222223333 2345566778999
Q ss_pred HHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCC-hHHHHHHhC--CcEecccCc----cCCCCCCh----hhHHHhh
Q psy8850 267 KRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIE-GESLLMAIK--DIAVSSGSA----CTSASLEP----SYVLRAL 335 (397)
Q Consensus 267 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~--~i~~~~g~~----~~~~~~~~----~~~~~~~ 335 (397)
+.+.+.|++ .|++..+..++ .++++.|.++..+ ...+.+.+. .+...-|.. ..|+++.+ .......
T Consensus 259 ~~l~~~L~~-~p~v~~v~~P~--~gg~~sf~~~~~~~~~~~~~~l~~~~~~~slg~~~sl~~~p~~~~~~~~~~~~r~~~ 335 (366)
T PRK08247 259 KAIAAFLNE-QPGVTDVLYPG--RGGMLSFRLQDEEWVNPFLKSLKLITFAESLGGVESFITYPATQTHADIPEEIRIAN 335 (366)
T ss_pred HHHHHHHHh-CCCeeEEecCC--cCcEEEEEECCHHHHHHHHHcCCcceEccCCCCCceEEECCcccccccCCHHHHHhc
Confidence 999999998 78876543332 1556667665311 123444443 223322211 12222211 1222244
Q ss_pred CCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHH
Q psy8850 336 GCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKK 372 (397)
Q Consensus 336 g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 372 (397)
|+.+ +.+|||++. |+++.+++.|.+++++
T Consensus 336 gi~~----~~~R~svGl----E~~~dl~~dl~~al~~ 364 (366)
T PRK08247 336 GVCN----RLLRFSVGI----ENVEDLIADLKQAFKQ 364 (366)
T ss_pred CCCC----CeEEEEecc----CCHHHHHHHHHHHHhh
Confidence 5543 899999997 6777778888777764
No 224
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.94 E-value=3.2e-24 Score=199.41 Aligned_cols=305 Identities=15% Similarity=0.131 Sum_probs=203.2
Q ss_pred cchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHH-HhhCCc
Q psy8850 33 HIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRK-LENDGF 111 (397)
Q Consensus 33 ~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~-~~~~g~ 111 (397)
+.+++...+...++++.++++.|.+. .+++++|+.|+..++. +. ++||+|+++++.|+++...+.. +...|.
T Consensus 42 ~~y~r~~~p~~~~Le~~lA~l~g~~~--~~~~~sG~aai~~~~~-~l----~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~ 114 (377)
T PRK07671 42 YEYSRTGNPTRAALEELIAVLEGGHA--GFAFGSGMAAITAVMM-LF----SSGDHVILTDDVYGGTYRVMTKVLNRFGI 114 (377)
T ss_pred CCcCCCCChHHHHHHHHHHHHhCCCc--eEEeCCHHHHHHHHHH-Hh----CCCCEEEECCCccchHHHHHHHHHhcCCe
Confidence 44555666788999999999999863 4556677778876653 55 7899999999999977665553 344599
Q ss_pred EEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCccccccCcccccE
Q psy8850 112 RVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDL 191 (397)
Q Consensus 112 ~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~ 191 (397)
+++.++.. |++++++++++++++|++++|+||+|.+.|+++|.++|+++|+++++|++++.+.... ...+++|+
T Consensus 115 ~v~~v~~~-----d~~~l~~ai~~~tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD~a~~~~~~~~-p~~~g~Di 188 (377)
T PRK07671 115 EHTFVDTS-----NLEEVEEAIRPNTKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVDNTFMTPYWQS-PISLGADI 188 (377)
T ss_pred EEEEECCC-----CHHHHHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCCccccCC-hhhhCCeE
Confidence 99988753 8999999999999999999999999999999999999999999999999987544322 22457899
Q ss_pred EEecccc-ccCCCC--ceEEEEecC-CCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8850 192 MSFSAHK-IYGPKG--IGALYIRRN-PRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQK 267 (397)
Q Consensus 192 ~~~s~~K-~~g~~g--~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~ 267 (397)
++.|++| +.|+.+ .|+++++++ ..+.+..... ...+..+....+.+...++ .+..+.++..+++.
T Consensus 189 vv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~~~-------~~g~~~~~~~a~l~~~~l~----tl~~R~~~~~~na~ 257 (377)
T PRK07671 189 VLHSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQN-------STGGILGPQDSWLLLRGLK----TLGIRMEEHETNSR 257 (377)
T ss_pred EEecCcccccCCccceeEEEEeCcHHHHHHHHHHHH-------hhcCCCCHHHHHHHHcCcC----hHHHHHHHHHHHHH
Confidence 9999999 455542 466766543 3222221110 0012222222221112222 24557778888899
Q ss_pred HHHHHHhhhcCcEEEeCCCC--------------CCCCceEEEEecCC-ChHHHHHHhC--CcEecccCccCC----CCC
Q psy8850 268 RLYNGLMESIEEIYINGDMN--------------NRIPHNLNISFNFI-EGESLLMAIK--DIAVSSGSACTS----ASL 326 (397)
Q Consensus 268 ~l~~~l~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~-~~~~~~~~l~--~i~~~~g~~~~~----~~~ 326 (397)
.+.+.|++ .+.+..+..+. ...++++.|.+.+. ....+...|+ .+...-|...+. ..+
T Consensus 258 ~la~~L~~-~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~f~~~l~l~~~~~s~G~~~sl~~~~~~~ 336 (377)
T PRK07671 258 AIAEFLNN-HPAVNKVYYPGLPSHPNHELAKEQANGFGGMISFDVGSEETANKVLERLQYFTLAESLGAVESLISIPSQM 336 (377)
T ss_pred HHHHHHHc-CCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEeCCHHHHHHHHHhCCcceEccCCCCCCeEeECCCcc
Confidence 99999988 77764442221 13467888888321 1334555555 344444544322 111
Q ss_pred Ch----hhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHH
Q psy8850 327 EP----SYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKV 370 (397)
Q Consensus 327 ~~----~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~ 370 (397)
.+ ....+..|+.+ +.||||++. |+.+.+++.|.+++
T Consensus 337 ~~~~~~~~~~~~~gi~~----~liR~svGl----E~~~dl~~dl~~al 376 (377)
T PRK07671 337 THASIPADRRKELGITD----GLIRISVGI----EDGEDLIEDLAQAL 376 (377)
T ss_pred ccccCCHHHHHhcCCCC----CeEEEEecc----CCHHHHHHHHHHHh
Confidence 11 12234566654 899999997 56777777777654
No 225
>PRK07049 methionine gamma-lyase; Validated
Probab=99.94 E-value=3.2e-24 Score=202.19 Aligned_cols=308 Identities=16% Similarity=0.130 Sum_probs=208.7
Q ss_pred cchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHH-HhhCCc
Q psy8850 33 HIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRK-LENDGF 111 (397)
Q Consensus 33 ~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~-~~~~g~ 111 (397)
+.+++...+....+++.|+++.+.+ ++++++||+.|+.+++.+++ ++||+|+++.+.|+.+...+.. +...|+
T Consensus 75 ~~y~R~~~Pt~~~Le~~lA~leg~~--~~iv~~sG~~Ai~~~l~al~----~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi 148 (427)
T PRK07049 75 LVYSRFNHPNSEIVEDRLAVYEGAE--SAALFSSGMSAIATTLLAFV----RPGDVILHSQPLYGGTETLLAKTFRNFGV 148 (427)
T ss_pred ccccCCCCcCHHHHHHHHHHHhCCC--cEEEEccHHHHHHHHHHHHh----CCCCEEEEcCCCcccHHHHHHHHHHhcCc
Confidence 3334444566788999999999965 68888999999999999888 8999999999999999877543 344588
Q ss_pred EEEEeccCCCCCCCHHHHHHHhc-----CCceEEEEecccCcccccccHHHHHHHHHh------cCcEEEEecccccCcc
Q psy8850 112 RVTYLKPKNNGLITLSQLEEKIC-----SDTILVSVMLVNNEIGVIQPILEIGELCRS------KGVIFHCDAAQAVGKI 180 (397)
Q Consensus 112 ~v~~v~~~~~~~~d~~~l~~~i~-----~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~------~gi~livD~a~~~~~~ 180 (397)
+++.++.. .|++++++++. +++++|++++|+||||.++|++++.++++. +++++++|+++..+..
T Consensus 149 ~~v~~~~~----~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~~~ 224 (427)
T PRK07049 149 GAVGFADG----LSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGPVF 224 (427)
T ss_pred EEEEEeCC----CCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCcccccc
Confidence 87766522 46778877664 479999999999999999999999999987 8999999999764432
Q ss_pred ccccCcccccEEEeccccccC-CCC--ceEEEEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHH
Q psy8850 181 DINIQNYKVDLMSFSAHKIYG-PKG--IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKE 257 (397)
Q Consensus 181 ~~~~~~~~~d~~~~s~~K~~g-~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~ 257 (397)
.. ....++|+++.|++|.+| ..| +|+++.+++..+.+...... ..++.+....+.+...++. +..
T Consensus 225 ~~-pl~~g~divv~S~SK~~gG~~glr~G~vv~~~~l~~~l~~~~~~-------~g~~ls~~~a~l~~r~L~t----l~~ 292 (427)
T PRK07049 225 QK-PLEHGADLSVYSLTKYVGGHSDLVAGAVLGRKALIRQVRALRSA-------IGTQLDPHSCWMLGRSLET----LVL 292 (427)
T ss_pred CC-ccccCCCEEEEcCceeecCCCCcEEEEEECCHHHHHHHHHHHHh-------cCCCCCHHHHHHHHcCCCh----HHH
Confidence 21 123478999999999444 344 68887776544444322111 1123333444443344443 445
Q ss_pred HHHHHHHHHHHHHHHHhhhcCcEEEeCCCC----------------CCCCceEEEEecCC--ChHHHHHHhC--CcEecc
Q psy8850 258 ELKRILFLQKRLYNGLMESIEEIYINGDMN----------------NRIPHNLNISFNFI--EGESLLMAIK--DIAVSS 317 (397)
Q Consensus 258 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~--~~~~~~~~l~--~i~~~~ 317 (397)
+.++..++++.+.+.|++ .|.+..+.-++ ...++++.|.+++. ....+.+.|+ .+...-
T Consensus 293 R~~~~~~~a~~la~~L~~-~p~V~~v~yp~~l~~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~l~~~~~sl 371 (427)
T PRK07049 293 RMERANRNARAVAEFLRD-HPKVEKLHYLPFLDPDSAYGAVYKRQCTGAGSTFSFDIKGGQAAAFRFLNALQIFKLAVSL 371 (427)
T ss_pred HHHHHHHHHHHHHHHHHh-CCCccEEECCCCCCCCCccHHHHHhhCCCCccEEEEEEcCCHHHHHHHHHcCcccEEcccC
Confidence 566778889999999998 77664332211 13466888888641 1345556665 444455
Q ss_pred cCccCCC----CCCh----hhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHH
Q psy8850 318 GSACTSA----SLEP----SYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVK 371 (397)
Q Consensus 318 g~~~~~~----~~~~----~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 371 (397)
|...+.. .+.+ ....+..|+.+ +.||||++. |++|.+++.|.++++
T Consensus 372 G~~~sli~~~~~~~h~~~~~~~~~~~gi~~----~liR~svGl----E~~~dl~~dl~~al~ 425 (427)
T PRK07049 372 GGTESLASHPASMTHSGVPADVRERIGVLE----STIRLSIGI----EHPDDLIADLAQALD 425 (427)
T ss_pred CCCCceeeCCCccccccCCHHHHHhcCCCc----CeEEEEeCc----CCHHHHHHHHHHHHh
Confidence 5444321 1111 12233456654 899999997 677778888877765
No 226
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.94 E-value=2e-24 Score=201.82 Aligned_cols=307 Identities=14% Similarity=0.099 Sum_probs=206.9
Q ss_pred cchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHH-HhhCCc
Q psy8850 33 HIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRK-LENDGF 111 (397)
Q Consensus 33 ~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~-~~~~g~ 111 (397)
+.+++...+...++++.++++.|.+ ++++++||++|+.+++.+++ ++||+|+++++.|+++...+.. ....|+
T Consensus 57 ~~Y~r~~~pt~~~Le~~lA~l~g~~--~~l~~~sgt~Ai~~~l~al~----~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi 130 (394)
T PRK07050 57 WRYGLHATPTSLALAQRLAEIEGGR--HALLQPSGLAAISLVYFGLV----KAGDDVLIPDNAYGPNRDHGEWLARDFGI 130 (394)
T ss_pred cccCCCCCHHHHHHHHHHHHHhCCC--eEEEeccHHHHHHHHHHHHh----CCCCEEEEecCCcccHHHHHHHHHHhcCe
Confidence 4445555667889999999999965 79999999999999999887 8999999999999998865543 334499
Q ss_pred EEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCccccccCcccccE
Q psy8850 112 RVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDL 191 (397)
Q Consensus 112 ~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~ 191 (397)
+++.++.. +.++++++++++|++|++++|+||+|.+.++++|+++|+++|+++++|++|+.+... .....++|+
T Consensus 131 ~v~~vd~~-----~~~~l~~~i~~~tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD~a~a~~~~~-~~l~~GaDi 204 (394)
T PRK07050 131 TVRFYDPL-----IGAGIADLIQPNTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAIDNTYSAGLAF-KPFEHGVDI 204 (394)
T ss_pred EEEEECCC-----CHHHHHHhcCCCCeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEECCccccccc-CHHHcCCeE
Confidence 99988753 457899999999999999999999999999999999999999999999999877642 233447899
Q ss_pred EEecccc-ccCCCC--ceEEEEec-CCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8850 192 MSFSAHK-IYGPKG--IGALYIRR-NPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQK 267 (397)
Q Consensus 192 ~~~s~~K-~~g~~g--~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~ 267 (397)
++.|++| +.|..+ .|++++++ +..+++...... ..++.+....+.+...++ .+..+.++..+++.
T Consensus 205 ~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~~~-------~G~~~~~~~a~l~lr~l~----tl~~Rl~~~~~~a~ 273 (394)
T PRK07050 205 SVQALTKYQSGGSDVLMGATITADAELHAKLKLARMR-------LGIGVSADDCSLVLRGLP----SLQVRLAAHDRSAL 273 (394)
T ss_pred EEEECCceecCCCCeeEEEEEECCHHHHHHHHHHHHh-------cCCCCCHHHHHHHHcCCC----cHHHHHHHHHHHHH
Confidence 9999999 544333 46666643 333333222110 011222221111111122 34446677777788
Q ss_pred HHHHHHhhhcCcEEEeCCCC--------------CCCCceEEEEecCC----ChHHHHHHhC--CcEecccCccCCCC--
Q psy8850 268 RLYNGLMESIEEIYINGDMN--------------NRIPHNLNISFNFI----EGESLLMAIK--DIAVSSGSACTSAS-- 325 (397)
Q Consensus 268 ~l~~~l~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~----~~~~~~~~l~--~i~~~~g~~~~~~~-- 325 (397)
++.+.|++ .+.+..+..+. ...++++.|.+... +..++.+.|+ ++...-|...+...
T Consensus 274 ~la~~L~~-~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~~ 352 (394)
T PRK07050 274 EVAEWLKA-RPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERYSPAQVDAFVEALELFAIGWSWGGACSLAMPY 352 (394)
T ss_pred HHHHHHHh-CCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCCCHHHHHHHHHcCCCCeeccccCCccceEeeC
Confidence 88888888 66654332111 13456777777632 2456666666 55566665554321
Q ss_pred -CChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHH
Q psy8850 326 -LEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKK 372 (397)
Q Consensus 326 -~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 372 (397)
+.+ ....... ..++.||||++. |+.|.+++.|.+++..
T Consensus 353 ~~~~-~~~~~~~----~~~~~iR~svGl----E~~~dl~~dl~~al~~ 391 (394)
T PRK07050 353 DVAS-MRTAKWP----HRGTLVRLYIGL----EDEADLIADLEQALEA 391 (394)
T ss_pred cccc-cchhhcC----CCCCEEEEEeCc----CCHHHHHHHHHHHHHH
Confidence 100 0111122 234899999997 5666666666666654
No 227
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.94 E-value=1.1e-24 Score=205.85 Aligned_cols=316 Identities=14% Similarity=0.109 Sum_probs=203.0
Q ss_pred CCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhC------CCCCcEE--EeCChhHHHHHHHHHhHh
Q psy8850 9 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIY------ADPREII--WTSGATESNNLAIKGAAH 80 (397)
Q Consensus 9 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~------~~~~~i~--~~~g~t~a~~~~l~~l~~ 80 (397)
++..+.+++.+++..... + .....|....+..++|+++++++. +++++|. .|.|+++|+.+++..+.
T Consensus 44 ~~~~~~~~~~~a~~~~~~-~---~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~- 118 (404)
T PTZ00376 44 GKPYVLESVRKAEKIIAE-K---NLDKEYLPIEGLQSFIEAAQKLLFGEASYALAEKRIATVQALSGTGALRLGFEFLK- 118 (404)
T ss_pred CCEehhhHHHHHHHHhcc-c---cCCCCCCCCCCCHHHHHHHHHHhcCCCccccccCeEEEeeccCcchHHHHHHHHHH-
Confidence 344556666666543221 1 111223334567888888888752 3566787 48899999988876321
Q ss_pred hhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccC--CCCCCCHHHHHHHhc---CCceEEEEecccCccccccc-
Q psy8850 81 FYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPK--NNGLITLSQLEEKIC---SDTILVSVMLVNNEIGVIQP- 154 (397)
Q Consensus 81 ~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~i~---~~~~~v~~~~~~~~tG~~~~- 154 (397)
.+.++||+|++.+|+|+.+...+..+ |.+++.+|.. +++.+|++.+++++. +++++++++++|||||.+++
T Consensus 119 ~~~~~Gd~Vlv~~P~y~~~~~~~~~~---G~~~~~v~l~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~ 195 (404)
T PTZ00376 119 RFLPAGTTVYVSNPTWPNHVNIFKSA---GLNVKEYRYYDPKTKGLDFDGMLEDLRTAPNGSVVLLHACAHNPTGVDPTE 195 (404)
T ss_pred HhcCCCCEEEEcCCCchhHHHHHHHc---CCceeeccccCcccCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCH
Confidence 22279999999999999999888887 9999999983 346799999999885 34678888999999999998
Q ss_pred --HHHHHHHHHhcCcEEEEecccccCccc---------cccCc-ccccEEEeccccccCCCC--ceEEE---EecCCCCc
Q psy8850 155 --ILEIGELCRSKGVIFHCDAAQAVGKID---------INIQN-YKVDLMSFSAHKIYGPKG--IGALY---IRRNPRTR 217 (397)
Q Consensus 155 --l~~i~~l~~~~gi~livD~a~~~~~~~---------~~~~~-~~~d~~~~s~~K~~g~~g--~g~~~---~~~~~~~~ 217 (397)
+++|+++|++||++||+|++|...... ..+.. ....+++.|++|.++.+| +|+++ .+++..+.
T Consensus 196 ~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRvG~~~~~~~~~~~~~~ 275 (404)
T PTZ00376 196 EQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMGLYGERIGALHIVCANKEEAAN 275 (404)
T ss_pred HHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCcccccccccceEEEEeCCHHHHHH
Confidence 467788899999999999998622110 01111 124588899999766445 78874 33332222
Q ss_pred cccccccCCccccccCCCCchhHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHhhhcC---cEEEeCCCCC
Q psy8850 218 IEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLA------RIEMKEELKRILFLQKRLYNGLMESIE---EIYINGDMNN 288 (397)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~------~~~~~~~~~~~~~~~~~l~~~l~~~~~---~~~~~~~~~~ 288 (397)
+...+... .....+..+.....+...+++.. .+.+.+.+++++++++.+.+.|++ +. ++.+..+.+
T Consensus 276 l~~~~~~~---~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~-~~~~~~~~~~~p~g- 350 (404)
T PTZ00376 276 VLSQLKLI---IRPMYSSPPIHGARIADRILSDPELRAEWLSELKEMSGRIQNMRQLLYDELKA-LGSPGDWEHIINQI- 350 (404)
T ss_pred HHHHHHHH---HhhhcCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCCcccccccCc-
Confidence 21111000 00011122333333333444321 123556677889999999999988 42 122322322
Q ss_pred CCCceEEEEecCCChHHHHHHhC---CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHH
Q psy8850 289 RIPHNLNISFNFIEGESLLMAIK---DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKL 365 (397)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~l~---~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~ 365 (397)
+..+++.+ + .++.+.|. +|.+.+| + |++++. .+.+++++++++
T Consensus 351 --g~f~~~~~---~-~~~~~~L~~~~~v~v~p~-------------------------~--Ris~~~-~~~~~~~~~~~~ 396 (404)
T PTZ00376 351 --GMFSFTGL---T-KEQVERLIEKYHIYLLDN-------------------------G--RISVAG-LTSKNVDYVAEA 396 (404)
T ss_pred --eEEEecCC---C-HHHHHHHHHhCCEeecCC-------------------------C--eEEEec-cCHHhHHHHHHH
Confidence 22333333 2 35555554 6777654 3 999975 689999999999
Q ss_pred HHHHHH
Q psy8850 366 LKMKVK 371 (397)
Q Consensus 366 l~~~~~ 371 (397)
|++++.
T Consensus 397 l~~~~~ 402 (404)
T PTZ00376 397 IHDVVR 402 (404)
T ss_pred HHHHHh
Confidence 998865
No 228
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.94 E-value=1.3e-23 Score=195.28 Aligned_cols=329 Identities=15% Similarity=0.108 Sum_probs=214.7
Q ss_pred CCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHh-HhhhccCCC
Q psy8850 9 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGA-AHFYKKRGK 87 (397)
Q Consensus 9 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l-~~~~~~~g~ 87 (397)
.+++.++++.+.+.+- ...+ ..+...++++.++++++.+ ++++++|+|+|+.+++.++ . ++||
T Consensus 9 ~~~~e~~a~~~~~~~~--------~~~~--~g~~~~~~e~~la~~~g~~--~~v~~~sgt~aL~~~l~al~~----~pGd 72 (376)
T TIGR02379 9 VTGQELEYIAEAISEG--------KLSG--DGPFSRRCETWLENRTGTK--KALLTPSCTAALEMAALLLDI----QPGD 72 (376)
T ss_pred CCHHHHHHHHHHHHcC--------CccC--CcHHHHHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHHcCC----CCcC
Confidence 3567788888887651 1111 1235788899999999876 7999999999999998876 4 7999
Q ss_pred EEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCC-CCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcC
Q psy8850 88 HIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNN-GLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKG 166 (397)
Q Consensus 88 ~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~-~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~g 166 (397)
+|++++++|+++..++... |.+++.++++++ +.+|++++++++++++++|+. .+++|...|+++|.++|++||
T Consensus 73 ~Viv~~~t~~~~~~~~~~~---G~~~v~vd~d~~~~~~d~~~le~~i~~~tk~Iip---~~~~G~~~d~~~I~~la~~~~ 146 (376)
T TIGR02379 73 EVIMPSYTFVSTANAFVLR---GAKIVFVDIRPDTMNIDETLIESAITHRTKAIVP---VHYAGVACDMDTIMALANKHQ 146 (376)
T ss_pred EEEECCCCcHHHHHHHHHc---CCEEEEEecCCCcCCCCHHHHHHhcCcCceEEEE---eCCCCCccCHHHHHHHHHHCC
Confidence 9999999999998888766 999999999865 679999999999999999874 456899999999999999999
Q ss_pred cEEEEecccccCccccccCccc--ccEEEecccc---c-cCCCCceEEEEe-cCCCCccccccccCCcc-c-------cc
Q psy8850 167 VIFHCDAAQAVGKIDINIQNYK--VDLMSFSAHK---I-YGPKGIGALYIR-RNPRTRIEAQIHGGGHE-Y-------GL 231 (397)
Q Consensus 167 i~livD~a~~~~~~~~~~~~~~--~d~~~~s~~K---~-~g~~g~g~~~~~-~~~~~~~~~~~~~~~~~-~-------~~ 231 (397)
++||+|++|+.+.. .+....+ .|+.++|+|+ + .|+. .|+++.+ ++..++++.....|... . .+
T Consensus 147 i~vIeDaa~~~g~~-~~~~~~g~~~~~~~fSf~~~K~l~~g~~-gG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 224 (376)
T TIGR02379 147 LFVIEDAAQGVMST-YKGRALGSIGHLGTFSFHETKNYTSGGE-GGALLINDQAFIERAEIIREKGTNRSQFFRGEVDKY 224 (376)
T ss_pred CEEEEECccccCCc-cCCcccCCCCCEEEEeCCCCCcCcccCC-ceEEEECCHHHHHHHHHHHHhCCCCccccccCCCcc
Confidence 99999999998764 2222223 3777888765 2 2334 4777776 34444444333222110 0 00
Q ss_pred ---cCCC---CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC--c-EEEeCCCCC--CCCceEEEEecC
Q psy8850 232 ---RSGT---LATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIE--E-IYINGDMNN--RIPHNLNISFNF 300 (397)
Q Consensus 232 ---~~~~---~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~-~~~~~~~~~--~~~~~~~~~~~~ 300 (397)
..|. ++-.+.+...+.|+ .+++..++.++..++..+.|.+ ++ + ..+...+.. ...+++.+.++.
T Consensus 225 ~~~~~g~n~~~~~~~Aa~g~~qL~----~l~~~~~~r~~~~~~y~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 299 (376)
T TIGR02379 225 TWRDIGSSYLPSELQAAYLWAQLE----QADRINQDRLATWQLYQDALKP-LEEKGIIELPSIPNGCQHNAHMFYIKLKD 299 (376)
T ss_pred eeeeecccCCccHHHHHHHHHHHH----HhHHHHHHHHHHHHHHHHHhcc-CCcCCeeeCCCCCCCCeeeeEEEEEEECC
Confidence 0111 11111111112333 3455666666667777777766 43 2 222211111 122445555543
Q ss_pred -CChHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCC-------CccccCceEEEeeCCCCCHHHHHHHHHHHHHHH
Q psy8850 301 -IEGESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGC-------NDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKV 370 (397)
Q Consensus 301 -~~~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~-------~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~ 370 (397)
.+..++.+.|+ ||..... +.|....+ ..+.++. ........|.+.+....+++|++++++.|++++
T Consensus 300 ~~~r~~l~~~L~~~gI~~~~~--~~p~~~~~--~~~~~~~~~~~~p~~~~~~~~~l~LP~~~~l~~~~~~~i~~~i~~~~ 375 (376)
T TIGR02379 300 EDDRNELIKYLKEQEIMAVFH--YVPLHSSP--AGRYFGRFHGEDIYTTKESERLVRLPLYYGLSKEDQARVIQTICDYL 375 (376)
T ss_pred cCCHHHHHHHHHHCCCCcccc--CcCCCcch--hHHhhCCCCCCChHHHHHHhceEEccCCCCCCHHHHHHHHHHHHHHh
Confidence 35678888887 7765533 33322222 1112211 112235679999998899999999999999864
No 229
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.93 E-value=6.5e-24 Score=201.95 Aligned_cols=320 Identities=18% Similarity=0.153 Sum_probs=215.7
Q ss_pred CCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccC
Q psy8850 6 TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKR 85 (397)
Q Consensus 6 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~ 85 (397)
-+..+|.+.+++.+++.... .+..+....+...++++.++++++.+.+.+++++||++|+..++..+... .+
T Consensus 50 lG~~~p~v~~a~~~~~~~~~------~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgsea~~~al~~~~~~--~~ 121 (413)
T cd00610 50 LGHNHPEVVEALKEQLAKLT------HFSLGFFYNEPAVELAELLLALTPEGLDKVFFVNSGTEAVEAALKLARAY--TG 121 (413)
T ss_pred cCCCCHHHHHHHHHHHHhCc------CccCcccCCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHHHHHHHHHH--cC
Confidence 34478999999999986521 11111112457888999999999977779999999999999999976422 35
Q ss_pred CCEEEEcCCCChhhHHHHHHHhhC----------CcEEEEeccCC------CCCCCHHHHHHHhcC---CceEEEEeccc
Q psy8850 86 GKHIITVQTEHKSVLDSIRKLEND----------GFRVTYLKPKN------NGLITLSQLEEKICS---DTILVSVMLVN 146 (397)
Q Consensus 86 g~~vl~~~~~~~s~~~~~~~~~~~----------g~~v~~v~~~~------~~~~d~~~l~~~i~~---~~~~v~~~~~~ 146 (397)
+++|++.++.|++.......+... ..++..+|.+. +...|++++++.+++ ++++++++..+
T Consensus 122 ~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p~~ 201 (413)
T cd00610 122 RKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEHPEEVAAVIVEPIQ 201 (413)
T ss_pred CCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcCCCCEEEEEEcccc
Confidence 688888888777766554443211 12355666652 223488999999876 67888898888
Q ss_pred Cccccccc----HHHHHHHHHhcCcEEEEecccccC-cc----ccccCcccccEEEecccc-ccCCCCceEEEEecCCCC
Q psy8850 147 NEIGVIQP----ILEIGELCRSKGVIFHCDAAQAVG-KI----DINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRT 216 (397)
Q Consensus 147 ~~tG~~~~----l~~i~~l~~~~gi~livD~a~~~~-~~----~~~~~~~~~d~~~~s~~K-~~g~~g~g~~~~~~~~~~ 216 (397)
+++|.+.| +++|.++|++||+++|+|++|+.. .. ..+.....+|++++ +| +.++.++|+++++++..+
T Consensus 202 ~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~~~~~~~~~~~d~~t~--sK~l~~g~~~g~~~~~~~~~~ 279 (413)
T cd00610 202 GEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIVTL--GKGLGGGLPLGAVLGREEIMD 279 (413)
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhhHhhcCCCCCeEEE--cccccCccccEEEEEcHHHHH
Confidence 88999887 899999999999999999998732 11 11222234676654 59 544445899988876555
Q ss_pred cc--ccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcE-EEeCCCCCCCCce
Q psy8850 217 RI--EAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEI-YINGDMNNRIPHN 293 (397)
Q Consensus 217 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~ 293 (397)
.+ .... ... ..+.+...+.+..++++.+.+ ..+.+++.++.+++++.|++ +... .+.... ...+.+
T Consensus 280 ~~~~~~~~------~~~-t~~~~~~~~~a~~a~l~~l~~--~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~-~~~g~~ 348 (413)
T cd00610 280 AFPAGPGL------HGG-TFGGNPLACAAALAVLEVLEE--EGLLENAAELGEYLRERLRE-LAEKHPLVGDV-RGRGLM 348 (413)
T ss_pred hhccCCCC------CCC-CCCcCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHH-HHhhCCcEEEe-ecCceE
Confidence 43 1111 111 123344556666678887765 46678888888888888877 4210 111110 112456
Q ss_pred EEEEecCC---------ChHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHH
Q psy8850 294 LNISFNFI---------EGESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFT 362 (397)
Q Consensus 294 ~~~~~~~~---------~~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~ 362 (397)
+.+.+... ....+.+.|. ||.+.++. .+.+|++++..+++++|+++
T Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~~~~-----------------------~~~lR~~~~~~~t~~~i~~~ 405 (413)
T cd00610 349 IGIELVKDRATKPPDKELAAKIIKAALERGLLLRPSG-----------------------GNVIRLLPPLIITEEEIDEG 405 (413)
T ss_pred EEEEEecCCCcCCcchHHHHHHHHHHHHCCeEEeecC-----------------------CCEEEEECCCcCCHHHHHHH
Confidence 66766532 2345665554 77777652 27899999998999999999
Q ss_pred HHHHHHH
Q psy8850 363 IKLLKMK 369 (397)
Q Consensus 363 ~~~l~~~ 369 (397)
+++|.++
T Consensus 406 ~~~l~~~ 412 (413)
T cd00610 406 LDALDEA 412 (413)
T ss_pred HHHHHHh
Confidence 9999875
No 230
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.93 E-value=6.1e-24 Score=200.32 Aligned_cols=337 Identities=18% Similarity=0.189 Sum_probs=217.5
Q ss_pred CCCCCCCCHHHHHHHHHHHhhccC--CCCCCCcchhhhHHHHHHH-HHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhH
Q psy8850 3 YSATTPIDPRVVDKMIPYLRVQFG--NPASRNHIYGWTAEKAIEK-ARNEVAQLIYADPREIIWTSGATESNNLAIKGAA 79 (397)
Q Consensus 3 ~~~~~~~~~~v~~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~ 79 (397)
.+|...++|.+++++...+...++ .+.+ ....+......+++ +++.+++++|.+. .+++++||+.|+..++.+++
T Consensus 34 ~~sen~~~p~v~~a~~~~~~~~~~~g~~gs-r~~~G~~~~~~lE~~~~~~la~l~g~~~-alv~~~SG~~A~~~~l~al~ 111 (416)
T PRK13034 34 IASENFTSPAVMEAQGSVLTNKYAEGYPGK-RYYGGCEFVDEVEALAIERAKQLFGCDY-ANVQPHSGSQANGAVYLALL 111 (416)
T ss_pred cccccCCCHHHHHHhcchhhcCCCCCCCCC-cccCCChHHHHHHHHHHHHHHHHhCCCc-eEEecCCcHHHHHHHHHHhc
Confidence 456677899999999999633332 2333 22222222223333 4459999999872 34557899999999999997
Q ss_pred hhhccCCCEEEEcCCCChhhHH-HHHHHhhCCcEE--EEeccC-CCCCCCHHHHHHHhcC-CceEEEEecccCccccccc
Q psy8850 80 HFYKKRGKHIITVQTEHKSVLD-SIRKLENDGFRV--TYLKPK-NNGLITLSQLEEKICS-DTILVSVMLVNNEIGVIQP 154 (397)
Q Consensus 80 ~~~~~~g~~vl~~~~~~~s~~~-~~~~~~~~g~~v--~~v~~~-~~~~~d~~~l~~~i~~-~~~~v~~~~~~~~tG~~~~ 154 (397)
++||+|+++...|.+... .... ...+... ..++.+ .++.+|++++++++.. ++++|+++++. .|...|
T Consensus 112 ----~~GD~Vl~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~klVi~~~~~--~g~~~d 184 (416)
T PRK13034 112 ----KPGDTILGMSLSHGGHLTHGAKV-SLSGKWYNAVQYGVDRLTGLIDYDEVEELAKEHKPKLIIAGFSA--YPRELD 184 (416)
T ss_pred ----CCCCEEEEcCccceeeeecCCcc-eeccceeeeEEcccccccCCcCHHHHHHHHhhcCCeEEEECCCc--cccccC
Confidence 899999999998877322 1111 0002222 344444 3566899999998854 68888775543 578889
Q ss_pred HHHHHHHHHhcCcEEEEecccccCccccccC---cccccEEEecccc-ccCCCCceEEEEecCCC-CccccccccCCccc
Q psy8850 155 ILEIGELCRSKGVIFHCDAAQAVGKIDINIQ---NYKVDLMSFSAHK-IYGPKGIGALYIRRNPR-TRIEAQIHGGGHEY 229 (397)
Q Consensus 155 l~~i~~l~~~~gi~livD~a~~~~~~~~~~~---~~~~d~~~~s~~K-~~g~~g~g~~~~~~~~~-~~~~~~~~~~~~~~ 229 (397)
+++|.++|++||+++++|++|++|....+.. ..++|++++|+|| +.|+.| |+++.+++.. ..+....+.+
T Consensus 185 l~~l~~la~~~g~~livD~Aha~G~~~~g~~~~~~~~~Di~~~s~~K~l~g~~G-G~v~~~~~~~~~~~~~~~~~~---- 259 (416)
T PRK13034 185 FARFREIADEVGALLMVDMAHIAGLVAAGEHPNPFPHAHVVTTTTHKTLRGPRG-GMILTNDEEIAKKINSAVFPG---- 259 (416)
T ss_pred HHHHHHHHHHcCCEEEEeCcccccCcccCCCCCCCCCceEEEEeCcccCCCCCC-eEEEECcHHHHHHHHhhcCCc----
Confidence 9999999999999999999999776533221 0158999999999 557766 7777665432 2233322211
Q ss_pred cccCCCCchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecC--CChHHH
Q psy8850 230 GLRSGTLATHQIVGMGEAFRLAR-IEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF--IEGESL 306 (397)
Q Consensus 230 ~~~~~~~~~~~~~~l~~al~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 306 (397)
.. +.+..+..+++..++.... .+..++.+++.++.++|++.|.+ . |+.+..+. ....++.+.+.. .+...+
T Consensus 260 -~~-~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~-~-G~~~~~~~--~~t~i~~v~~~~~~~~~~~~ 333 (416)
T PRK13034 260 -LQ-GGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKE-R-GYDLVSGG--TDNHLLLVDLRPKGLSGKDA 333 (416)
T ss_pred -cc-CCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHH-c-CCEeccCC--CCCcEEEEEcCCCCCCHHHH
Confidence 11 2233444454444444433 34456789999999999999998 4 77776421 124555666543 344566
Q ss_pred HHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCC----CCCHHHHHHHHHHHHHHHHH
Q psy8850 307 LMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGR----FTTEKEIDFTIKLLKMKVKK 372 (397)
Q Consensus 307 ~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~----~~~~~~i~~~~~~l~~~~~~ 372 (397)
.+.|. ||.+..-.... ....+.....||++++. .++++||++++++|.+++..
T Consensus 334 ~~~L~~~GI~v~~~~~p~-------------~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~~~~~ 392 (416)
T PRK13034 334 EQALERAGITVNKNTVPG-------------DTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWILDVLDD 392 (416)
T ss_pred HHHHHhCCcEEeccCCCC-------------CCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHHHHHhc
Confidence 56665 77776421000 00011113679999877 56799999999999999774
No 231
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.93 E-value=1.1e-23 Score=193.43 Aligned_cols=294 Identities=13% Similarity=0.104 Sum_probs=204.1
Q ss_pred CHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEE
Q psy8850 10 DPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHI 89 (397)
Q Consensus 10 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~v 89 (397)
+|.++++..+.+..+. ...+...++++.+++++|.+++++++++|+++|+..++.++. ++||+|
T Consensus 35 ~~~~~~~~~~~~~~~~------------g~~~~~~~Le~~lA~~~g~~~e~ilv~~gg~~a~~~~~~al~----~~gd~V 98 (346)
T TIGR03576 35 GFKIDEEDLELLETYV------------GPAIFEEKVQELGREHLGGPEEKILVFNRTSSAILATILALE----PPGRKV 98 (346)
T ss_pred ChhHHHHHHHHHHHhc------------CCHHHHHHHHHHHHHHcCCCcceEEEECCHHHHHHHHHHHhC----CCCCEE
Confidence 6888888888887642 123678999999999999988899999999999999999998 899999
Q ss_pred EEc---CCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCccccc---ccHHHHHHHHH
Q psy8850 90 ITV---QTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVI---QPILEIGELCR 163 (397)
Q Consensus 90 l~~---~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~---~~l~~i~~l~~ 163 (397)
+++ .+.|+++...+... |.++... .++++++. .+++++|+++. .+++|.+ .++++|+++|+
T Consensus 99 li~~~d~p~~~s~~~~~~l~---ga~~~~~-------~~l~~l~~--~~~~~lIiitg-~s~~G~v~~~~~L~~i~~la~ 165 (346)
T TIGR03576 99 VHYLPEKPAHPSIPRSCKLA---GAEYFES-------DELSELKK--IDGTSLVVITG-STMDLKVVSEEDLKRVIKQAK 165 (346)
T ss_pred EECCCCCCCchhHHHHHHHc---CCEEecc-------CCHHHHhh--CcCceEEEEEC-CCCCCcccCHHHHHHHHHHHH
Confidence 874 46888887777666 7765322 14555433 35678888865 6889988 56889999999
Q ss_pred hcCcEEEEecccccCccc-cc---cCcccccEEEecccc-ccCCCCceEEEEecCCCCccccccccCCccccccCCCCch
Q psy8850 164 SKGVIFHCDAAQAVGKID-IN---IQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLAT 238 (397)
Q Consensus 164 ~~gi~livD~a~~~~~~~-~~---~~~~~~d~~~~s~~K-~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (397)
+||++|++|++|+.+... .+ ....+.|+++.|++| +.|+. .|+++++++..+.+...... +..+ .+.
T Consensus 166 ~~~~~livDEAy~~~~~~~~~~~~~~~~~~divv~s~SKalaG~r-~G~v~~~~~li~~l~~~~~~------~~~s-~~~ 237 (346)
T TIGR03576 166 SKEAIVLVDDASGARVRRLYGQPPALDLGADLVVTSTDKLMDGPR-GGLLAGRKELVDKIKSVGEQ------FGLE-AQA 237 (346)
T ss_pred HcCCEEEEECCccccccccCCCCCHHHcCCcEEEeccchhccccc-eEEEEeCHHHHHHHHHhhcC------cccC-ccH
Confidence 999999999999965421 11 122357899999999 55776 59999998766665544322 1222 344
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCChHHH-HHHhC--CcEe
Q psy8850 239 HQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESL-LMAIK--DIAV 315 (397)
Q Consensus 239 ~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~--~i~~ 315 (397)
+...+..++|+... .+...+.+.++.+.+.+.+.+ +. +...+ .+++.+.++..++.++ ...|. +|.+
T Consensus 238 ~~~~aa~~aL~~~~--~~~~~~~l~~r~~~~~~~l~~-~~---~~~~~----~~f~~~~~~~~~~~~~~~~ll~~~gV~v 307 (346)
T TIGR03576 238 PLLAAVVRALEEFE--LSRIRDAFKRKEEVYLRLFDK-LN---VERTP----TGFVIKGVEEEKLIEIGLDLLRNYGIIT 307 (346)
T ss_pred HHHHHHHHHHhhcc--HHHHHHHHHHHHHHHHHHHHh-CC---CCcCC----CeEEEEeCCCCCHHHHHHHHHHhCCEEE
Confidence 45555567776533 245567777777777777765 32 22222 2355566653333333 34443 8999
Q ss_pred cccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHH---HHHHHHHHHHHHH
Q psy8850 316 SSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEK---EIDFTIKLLKMKV 370 (397)
Q Consensus 316 ~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~---~i~~~~~~l~~~~ 370 (397)
.++..+.. .++++||+++. +++ ++++++++|++.+
T Consensus 308 ~~~~~f~~------------------~~~~vRis~~~--~~~~~~~~~~~~~al~~~~ 345 (346)
T TIGR03576 308 ITAVGMPG------------------ASKTLRFDLAA--KDAERIGDDYLVEAVKDSL 345 (346)
T ss_pred eCCcccCC------------------CCCeEEEEEec--ChHHhcCHHHHHHHHHhcc
Confidence 98754321 13799999984 333 7999999998754
No 232
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.93 E-value=1.3e-23 Score=198.32 Aligned_cols=311 Identities=17% Similarity=0.141 Sum_probs=203.8
Q ss_pred hhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHH-HhhCCcEE
Q psy8850 35 YGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRK-LENDGFRV 113 (397)
Q Consensus 35 ~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~-~~~~g~~v 113 (397)
+++...+...++++.++++.|.+ ..++++||+.|+..++.++. ++||+|+++++.|+++...+.. +...|.++
T Consensus 51 ysr~~~p~~~~le~~lA~l~g~~--~~v~~~sG~~Ai~~al~~l~----~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v 124 (418)
T TIGR01326 51 YSRLMNPTTDVLEQRIAALEGGV--AALAVASGQAAITYAILNLA----QAGDNIVSSSYLYGGTYNLFKHTLKRLGIEV 124 (418)
T ss_pred eECCCChhHHHHHHHHHHHhCCC--eEEEEccHHHHHHHHHHHHh----CCCCEEEEECCCcHHHHHHHHHHHHHcCcEE
Confidence 33444556789999999999975 68889999999999998887 7899999999999887766544 33459999
Q ss_pred EEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCccccccCcccccEEE
Q psy8850 114 TYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMS 193 (397)
Q Consensus 114 ~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~ 193 (397)
+.++.+ |++++++++++++++|++++++||+|.+.|+++|+++|+++|+++|+|++++.+... +....++|+++
T Consensus 125 ~~v~~~-----d~~~l~~~l~~~t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD~t~~~~~~~-~~l~~g~Divv 198 (418)
T TIGR01326 125 RFVDPD-----DPEEFEKAIDENTKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVDNTFATPYLC-RPIDHGADIVV 198 (418)
T ss_pred EEECCC-----CHHHHHHhcCcCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCchhhcC-CchhcCCeEEE
Confidence 998854 899999999999999999999999999999999999999999999999999866432 22234799999
Q ss_pred eccccccCCCC--ceEEEEecCCCC-ccccccccC-Ccc------------------------ccccCCCCchhHHHHHH
Q psy8850 194 FSAHKIYGPKG--IGALYIRRNPRT-RIEAQIHGG-GHE------------------------YGLRSGTLATHQIVGMG 245 (397)
Q Consensus 194 ~s~~K~~g~~g--~g~~~~~~~~~~-~~~~~~~~~-~~~------------------------~~~~~~~~~~~~~~~l~ 245 (397)
.|++|++++.| +|++++++.... .......-. ... .....+..+....+-+.
T Consensus 199 ~S~sK~l~g~G~~lGg~v~~~~~~~~~~~~~~~~~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~~~~ 278 (418)
T TIGR01326 199 HSATKYIGGHGTAIGGVIVDGGKFDWANGRFPLFTTPDPSYHGLVFTETFGNPAFIVKARVQLLRDLGAALSPFNAFLLL 278 (418)
T ss_pred ECccccccCCccceEEEEEecccccccccccccccCCCCccccchhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHH
Confidence 99999666545 677777543211 110000000 000 00000000000111010
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCC---------------CCCCceEEEEecCC-C-hHHHHH
Q psy8850 246 EAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMN---------------NRIPHNLNISFNFI-E-GESLLM 308 (397)
Q Consensus 246 ~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~-~-~~~~~~ 308 (397)
..++ .+..+.++..++...+.+.|.+ .+++..+.-|+ ...++++.|.+++. . ..++.+
T Consensus 279 ~~l~----tl~~R~~~~~~~a~~la~~L~~-~~~V~~V~yP~l~~~~~~~~~~~~~~~g~g~~~s~~l~~~~~~~~~f~~ 353 (418)
T TIGR01326 279 QGLE----TLSLRMERHVENALKVAEFLEA-HPKVAWVNYPGLASHPHHALAKKYLPKGFGAVLSFEIKGGREAGKKFID 353 (418)
T ss_pred CCcc----cHHHHHHHHHHHHHHHHHHHHh-CCCccEEECCCCCCCccHHHHHHhccCCCcceEEEEecCCHHHHHHHHH
Confidence 1111 2344456666777888888888 77765332211 23466888888642 1 345666
Q ss_pred HhC--CcEecccCccCC----CCCCh----hhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHH
Q psy8850 309 AIK--DIAVSSGSACTS----ASLEP----SYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKV 370 (397)
Q Consensus 309 ~l~--~i~~~~g~~~~~----~~~~~----~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~ 370 (397)
.|+ ....+-|...+. ..+.+ ....+..|+.+ +.||||++. |++|.+++.|.+++
T Consensus 354 ~l~l~~~~~slG~~~sl~~~~~~~~h~~~~~~~~~~~gi~~----~liR~svGl----E~~~dl~~dl~~Al 417 (418)
T TIGR01326 354 ALKLASHLANVGDAKSLVIHPASTTHQQLSEEEQLKAGVTP----GLIRLSVGI----ENIDDIIADLEQAL 417 (418)
T ss_pred hCCcceeccccCCCCceeeCCCCCCcccCCHHHHHhcCCCC----CeEEEEecC----CCHHHHHHHHHHhh
Confidence 666 444444443332 11111 12234566664 899999997 56777777777654
No 233
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.93 E-value=7.8e-24 Score=196.89 Aligned_cols=331 Identities=19% Similarity=0.173 Sum_probs=217.7
Q ss_pred HHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEE
Q psy8850 11 PRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHII 90 (397)
Q Consensus 11 ~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl 90 (397)
++.++++.+.+.+-+ .... .....++++.+++++|.+ .++.++|||.|+.+++.++.. ++|++|+
T Consensus 5 ~e~~~~v~~~l~s~~------~~~~----g~~~~~fE~~~a~~~g~~--~~~~~~sgt~Al~~al~~l~~---~~gdeVi 69 (363)
T PF01041_consen 5 EEEIDAVLEVLRSGW------LSTY----GPYVEEFEKEFAEYFGVK--YAVAVSSGTSALHLALRALGL---GPGDEVI 69 (363)
T ss_dssp HHHHHHHHHHHHHTC------CSSS----SHHHHHHHHHHHHHHTSS--EEEEESSHHHHHHHHHHHTTG---GTTSEEE
T ss_pred HHHHHHHHHHHHhCC------ccCC----CHHHHHHHHHHHHHhCCC--eEEEeCChhHHHHHHHHhcCC---CcCceEe
Confidence 466777777776621 1110 246888999999999977 899999999999999999765 6899999
Q ss_pred EcCCCChhhHHHHHHHhhCCcEEEEeccC-CCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEE
Q psy8850 91 TVQTEHKSVLDSIRKLENDGFRVTYLKPK-NNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIF 169 (397)
Q Consensus 91 ~~~~~~~s~~~~~~~~~~~g~~v~~v~~~-~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~l 169 (397)
++...++++..++... |.++++++++ +++.+|++++++++++++++|+++|. -|...++++|.++|+++|++|
T Consensus 70 ~p~~t~~~~~~ai~~~---G~~pv~~Di~~~~~~id~~~~~~~i~~~t~ai~~~h~---~G~~~d~~~i~~~~~~~~i~l 143 (363)
T PF01041_consen 70 VPAYTFPATASAILWA---GAEPVFVDIDPETLNIDPEALEKAITPKTKAILVVHL---FGNPADMDAIRAIARKHGIPL 143 (363)
T ss_dssp EESSS-THHHHHHHHT---T-EEEEE-BETTTSSB-HHHHHHHHHTTEEEEEEE-G---GGB---HHHHHHHHHHTT-EE
T ss_pred cCCCcchHHHHHHHHh---ccEEEEEeccCCcCCcCHHHHHHHhccCccEEEEecC---CCCcccHHHHHHHHHHcCCcE
Confidence 9999999999999988 9999999999 78999999999999999999999987 699999999999999999999
Q ss_pred EEecccccCcccccc-CcccccEEEeccc--cccCCCCceEEEEecCCC-CccccccccCCc---cccccCC---CCchh
Q psy8850 170 HCDAAQAVGKIDINI-QNYKVDLMSFSAH--KIYGPKGIGALYIRRNPR-TRIEAQIHGGGH---EYGLRSG---TLATH 239 (397)
Q Consensus 170 ivD~a~~~~~~~~~~-~~~~~d~~~~s~~--K~~g~~g~g~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~---~~~~~ 239 (397)
|.|++|+.|...-+. ....-|+.++||+ |.......|+++.+++.. ++++.+...+.. ...+... ..| .
T Consensus 144 IeD~a~a~g~~~~g~~~G~~gd~~~fSf~~~K~i~~geGG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~n-~ 222 (363)
T PF01041_consen 144 IEDAAQAFGARYKGRPVGSFGDIAIFSFHPTKIITTGEGGAVVTNDPELAERARALRNHGRSRDAFRRYRHELPPGYN-F 222 (363)
T ss_dssp EEE-TTTTT-EETTEETTSSSSEEEEESSTTSSS-SSS-EEEEESTHHHHHHHHHHTBTTEETSECSTTEESSSS--B--
T ss_pred EEccccccCceeCCEeccCCCCceEecCCCCCCCcCCCCeeEEecHHHHHHHhhhhhccCcCccccccccccccCCcc-c
Confidence 999999988753221 1113488888885 644433358888876532 233222111110 0001000 011 1
Q ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCC---CCCceEEEEecCC---ChHHHHHHhC-
Q psy8850 240 QIVGMGEAFRLA-RIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNN---RIPHNLNISFNFI---EGESLLMAIK- 311 (397)
Q Consensus 240 ~~~~l~~al~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~---~~~~~~~~l~- 311 (397)
.+-.+.+++-.. .+.+++..++.+++.+++.+.|.+ ++++.....+.. ...+.+.+.+++. +..++.+.|.
T Consensus 223 rm~~~~AAigl~QL~~L~~~~~~R~~~a~~y~~~L~~-~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~rd~l~~~L~~ 301 (363)
T PF01041_consen 223 RMSELQAAIGLAQLKRLDEIIARRRENAQRYREALAG-IPGIKPPPIPDGAERSSYYRFPIRLPDEALADRDELVEALRA 301 (363)
T ss_dssp B-BHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTT-GTTEEEEGCGTTTEEBCESSEEEEETCCGCSTHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCCcccccccccccccccccccccccccccchHHHHHHHHHH
Confidence 111122222221 235677888888999999999999 888766544332 2345667777653 5778888887
Q ss_pred -CcEecccCccCCCCCChhhHHHhhC--------CCccccCceEEEeeCCCCCHHHHHHHHHHHH
Q psy8850 312 -DIAVSSGSACTSASLEPSYVLRALG--------CNDELAHSSIRFTIGRFTTEKEIDFTIKLLK 367 (397)
Q Consensus 312 -~i~~~~g~~~~~~~~~~~~~~~~~g--------~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~ 367 (397)
||...... ..+.... ..++... .........|.+.+....+.++++++++.|+
T Consensus 302 ~GI~~~~~~-~~pl~~~--~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~~I~~~ir 363 (363)
T PF01041_consen 302 RGIETRPHY-PKPLHRQ--PVYRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTEEDVDYIAEAIR 363 (363)
T ss_dssp TTBEEBCST-SSCGGGS--GGGTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCHHHHHHHHHHHH
T ss_pred CCCcccccc-cCchhhh--HHHHhcCccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHhhccC
Confidence 78777654 1111000 1111111 0112235789999999999999999999875
No 234
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.93 E-value=1.7e-23 Score=206.48 Aligned_cols=311 Identities=12% Similarity=0.129 Sum_probs=211.5
Q ss_pred HHHHHHHHHHHHHHHhCCCCCcEEEeC-ChhHHHHHHHHHhHhhhc----cCCCEEEEcCCCChhhHHHHHHHhhCCcEE
Q psy8850 39 AEKAIEKARNEVAQLIYADPREIIWTS-GATESNNLAIKGAAHFYK----KRGKHIITVQTEHKSVLDSIRKLENDGFRV 113 (397)
Q Consensus 39 ~~~~~~~~~~~la~~~~~~~~~i~~~~-g~t~a~~~~l~~l~~~~~----~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v 113 (397)
.-+.+.++++++++++|.+. +.+.+ +|++|..++++++...+. ..+++|+++...|+++...+... |+++
T Consensus 541 ~lq~i~elq~~l~eLtGmd~--~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpasa~~~---GieV 615 (954)
T PRK12566 541 YRAMIDELEAWLCAITGFDA--ICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPASAQMA---GMRV 615 (954)
T ss_pred HHHHHHHHHHHHHHHHCCCe--EeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHHHHHHC---CCEE
Confidence 34688899999999999984 45555 666777677777653221 23578999999998887665554 9999
Q ss_pred EEeccCCCCCCCHHHHHHHhc---CCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCccccc-cCcccc
Q psy8850 114 TYLKPKNNGLITLSQLEEKIC---SDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDIN-IQNYKV 189 (397)
Q Consensus 114 ~~v~~~~~~~~d~~~l~~~i~---~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~-~~~~~~ 189 (397)
+.+|++++|.+|+++|+++++ +++++|.++++++-++...|+++|+++||++|+++++|+++..+...++ ...+++
T Consensus 616 v~Vp~D~~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~~l~~Pg~~GA 695 (954)
T PRK12566 616 VIVECDPDGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQVGLARPADIGA 695 (954)
T ss_pred EEeccCCCCCcCHHHHHHHhhccCCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhccCCCChhhcCC
Confidence 999999899999999999997 6788899999988877777799999999999999999999987776665 467899
Q ss_pred cEEEecccc-ccCCCCceEEEEec-CCCCccccccccCC---c-cccccCCCC-c--hhHHHHHHHHHHHHHH-H--HHH
Q psy8850 190 DLMSFSAHK-IYGPKGIGALYIRR-NPRTRIEAQIHGGG---H-EYGLRSGTL-A--THQIVGMGEAFRLARI-E--MKE 257 (397)
Q Consensus 190 d~~~~s~~K-~~g~~g~g~~~~~~-~~~~~~~~~~~~~~---~-~~~~~~~~~-~--~~~~~~l~~al~~~~~-~--~~~ 257 (397)
|++++|+|| +++|.|.|..++.. ...+.+.+++.++. . ..+-+.++. + +.+...+..+..++.. | +.+
T Consensus 696 Di~~~s~HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~~d~~G~~~r~ga~S~~~~gsa~~l~~A~~Yi~~lG~eLk~ 775 (954)
T PRK12566 696 DVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPVVPVEGPDPNNGAVSAAPWGSASILPISWMYIAMMGPQLAD 775 (954)
T ss_pred CEEEecCCcccCcCccCCCCccchhhhhhhhhhhccCCCCcCCCCCCCCCCceeecccchHHHHHHHHHHHHHHCHHHHH
Confidence 999999999 66677666655544 22333333333221 0 000011222 1 1121112233333322 2 444
Q ss_pred HHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEec------CCChHHHHHHhC--CcEecccCccCCCCCChh
Q psy8850 258 ELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN------FIEGESLLMAIK--DIAVSSGSACTSASLEPS 329 (397)
Q Consensus 258 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~--~i~~~~g~~~~~~~~~~~ 329 (397)
.......+++++.+.|.+ ..++.. .+......+-+.+.+. +.+..++.++|. |+.... ...+
T Consensus 776 aa~~ailnAnYla~rL~~-~~~v~~-~~~~~~~~hEfii~~~~l~~~~g~~~~dvakRL~d~Gihapt--~~fP------ 845 (954)
T PRK12566 776 ASEVAILSANYLANQLGG-AFPVLY-RGRNERVAHECILDLRPLKAQTGISEEDVAKRLMDYGFHAPT--MSFP------ 845 (954)
T ss_pred HHHHHHHHHHHHHHHhHh-hCCCCc-CCCCCCeeeEEEEEccccccccCCCHHHHHHHHHHCCcEEeE--Eeec------
Confidence 444456788999999977 334333 2211111233334433 245577888876 444322 1111
Q ss_pred hHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHHHhc
Q psy8850 330 YVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKLREL 376 (397)
Q Consensus 330 ~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~ 376 (397)
..+.+||+++.+++++|||+++++|+.+.+++++.
T Consensus 846 ------------v~~~LmIepTE~eskeEIDrf~eAL~~I~~e~~~v 880 (954)
T PRK12566 846 ------------VPGTLMVEPTESESKAELDRFVEAMLSIRAEIGKV 880 (954)
T ss_pred ------------cCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHHHH
Confidence 13789999999999999999999999999998774
No 235
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.93 E-value=6.3e-25 Score=198.35 Aligned_cols=219 Identities=18% Similarity=0.199 Sum_probs=174.1
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCC
Q psy8850 41 KAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN 120 (397)
Q Consensus 41 ~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~ 120 (397)
..+.++++.+++++|++ +.+++++|+|.|+..++.++. ++||+|+++.++|.+...++... |.+++.++.+.
T Consensus 59 g~i~~~~~~~A~~~ga~-~~~~~~~Gst~a~~~~l~al~----~~gd~Vlv~~~~h~s~~~~~~~~---g~~~~~v~~~~ 130 (294)
T cd00615 59 GPIKEAQELAARAFGAK-HTFFLVNGTSSSNKAVILAVC----GPGDKILIDRNCHKSVINGLVLS---GAVPVYLKPER 130 (294)
T ss_pred hHHHHHHHHHHHHhCCC-CEEEEcCcHHHHHHHHHHHcC----CCCCEEEEeCCchHHHHHHHHHC---CCEEEEecCcc
Confidence 36889999999999986 346669999999999999887 79999999999999999888776 88999887753
Q ss_pred C------CCCCHHHHHHHhcC--CceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccC-----ccccccCcc
Q psy8850 121 N------GLITLSQLEEKICS--DTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVG-----KIDINIQNY 187 (397)
Q Consensus 121 ~------~~~d~~~l~~~i~~--~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~-----~~~~~~~~~ 187 (397)
+ +.+|++++++++++ ++++++++++ |++|.+.|+++|+++|+++|+++++|++|+.. ..+.+....
T Consensus 131 ~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~~~~ 209 (294)
T cd00615 131 NPYYGIAGGIPPETFKKALIEHPDAKAAVITNP-TYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAAMA 209 (294)
T ss_pred CcccCcCCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEecCHHHHHHHHHhcCCeEEEECcchhhhccCcccCcchhhc
Confidence 2 37899999999964 6889999987 78999999999999999999999999999842 233344445
Q ss_pred cccEEEecccc-ccCCCCceEEEEecCCCCc--cccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8850 188 KVDLMSFSAHK-IYGPKGIGALYIRRNPRTR--IEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILF 264 (397)
Q Consensus 188 ~~d~~~~s~~K-~~g~~g~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~ 264 (397)
++|+++.|+|| +.|+.+.|+++++++.... +.... ..+..++++...++++..+++++.....++.++..+
T Consensus 210 ~~div~~S~hK~l~g~~~~~~l~~~~~~~~~~~~~~~~------~~~~ttsps~~~~asl~~a~~~~~~~g~~~~~~~~~ 283 (294)
T cd00615 210 GADIVVQSTHKTLPALTQGSMIHVKGDLVNPDRVNEAL------NLHQSTSPSYLILASLDVARAMMALEGKELVEELIE 283 (294)
T ss_pred CCcEEEEchhcccchHhHHHHHHhCCCcCCHHHHHHHH------HHHCCCCcHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 89999999999 6666666887777542221 11111 224467888899999999998876555667788888
Q ss_pred HHHHHHHHHh
Q psy8850 265 LQKRLYNGLM 274 (397)
Q Consensus 265 ~~~~l~~~l~ 274 (397)
+.+.+++.|.
T Consensus 284 ~~~~~r~~l~ 293 (294)
T cd00615 284 LALYARQEIN 293 (294)
T ss_pred HHHHHHHHHh
Confidence 8888888775
No 236
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.93 E-value=1.1e-23 Score=194.06 Aligned_cols=308 Identities=20% Similarity=0.182 Sum_probs=210.0
Q ss_pred CcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHH-HhhCC
Q psy8850 32 NHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRK-LENDG 110 (397)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~-~~~~g 110 (397)
.+.+++...+....+++.|+++-|.+ ..++++||..|+.+++.+++ ++||+|+++...|..+...+.. +.+.|
T Consensus 46 ~~~Y~R~gnPt~~~le~~la~Le~g~--~a~~~~SGmaAi~~~l~~ll----~~Gd~iv~~~~~Y~~t~~~~~~~l~~~g 119 (386)
T PF01053_consen 46 GYIYSRYGNPTVRALEQRLAALEGGE--DALLFSSGMAAISAALLALL----KPGDHIVASDDLYGGTYRLLEELLPRFG 119 (386)
T ss_dssp SCSBTTTC-HHHHHHHHHHHHHHT-S--EEEEESSHHHHHHHHHHHHS-----TTBEEEEESSSSHHHHHHHHHCHHHTT
T ss_pred CcceeccccccHHHHHHHHHHhhccc--ceeeccchHHHHHHHHHhhc----ccCCceEecCCccCcchhhhhhhhcccC
Confidence 46667777889999999999999985 68889999999999999888 7899999999999999988886 45569
Q ss_pred cEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcC-cEEEEecccccCccccccCcccc
Q psy8850 111 FRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKG-VIFHCDAAQAVGKIDINIQNYKV 189 (397)
Q Consensus 111 ~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~g-i~livD~a~~~~~~~~~~~~~~~ 189 (397)
+++..++.. |++++++++++++++|+++.|.||+..+.|++.|+++||++| +++++|++.+.+.. .+...+++
T Consensus 120 v~v~~~d~~-----d~~~l~~~l~~~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vVDnT~atp~~-~~pL~~Ga 193 (386)
T PF01053_consen 120 VEVTFVDPT-----DLEALEAALRPNTKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVVDNTFATPYN-QNPLELGA 193 (386)
T ss_dssp SEEEEESTT-----SHHHHHHHHCTTEEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEEECTTTHTTT-C-GGGGT-
T ss_pred cEEEEeCch-----hHHHHHhhccccceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEeeccccceee-eccCcCCc
Confidence 999999765 899999999999999999999999999999999999999998 99999999886643 23334589
Q ss_pred cEEEeccccccCCCC---ceEEEEec--CCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8850 190 DLMSFSAHKIYGPKG---IGALYIRR--NPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILF 264 (397)
Q Consensus 190 d~~~~s~~K~~g~~g---~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~ 264 (397)
|+++.|.+|++++.+ .|++++++ +....+..... ....+.+....+.+...++ .+.-+.++..+
T Consensus 194 Divv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~-------~~G~~~~p~da~ll~rgl~----Tl~~R~~~~~~ 262 (386)
T PF01053_consen 194 DIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFRR-------LLGATLSPFDAWLLLRGLR----TLPLRMERQNE 262 (386)
T ss_dssp SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHH-------HHT-B--HHHHHHHHHHHT----THHHHHHHHHH
T ss_pred eEEEeeccccccCCcceeeEEEEECchhhhhhhhcchhh-------hcCccchHHHHHHHhcCCC----cHHHHHHHHHH
Confidence 999999999555444 57777764 23222222110 0111222222222222222 35667888889
Q ss_pred HHHHHHHHHhhhcCcEEEeCCCC--------------CCCCceEEEEecCCC--hHHHHHHhC--CcEecccCccC----
Q psy8850 265 LQKRLYNGLMESIEEIYINGDMN--------------NRIPHNLNISFNFIE--GESLLMAIK--DIAVSSGSACT---- 322 (397)
Q Consensus 265 ~~~~l~~~l~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~--~~~~~~~l~--~i~~~~g~~~~---- 322 (397)
++..+.+.|++ .|.+.-+..|. ...++++.|.+++.. ...+.+.|+ .....-|...+
T Consensus 263 nA~~lA~~L~~-hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~~~~~~~f~~~l~l~~~~~SlGg~~SLi~~ 341 (386)
T PF01053_consen 263 NAEALAEFLEE-HPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGGEEAARRFLDALKLFSIAPSLGGVESLISH 341 (386)
T ss_dssp HHHHHHHHHHT-STTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSHHHHHHHHHHH-SSSEESSS-SSSS-EEEE
T ss_pred HHHHHHHHHHh-CCCCCeEEEcccccccceeeeeecccccCceeEEEeccchhhhHhHHhhhhhHhhhhhcCCccccccc
Confidence 99999999999 77775332221 133568888887532 356666766 23444444332
Q ss_pred CCCCC----hhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHH
Q psy8850 323 SASLE----PSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVK 371 (397)
Q Consensus 323 ~~~~~----~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 371 (397)
|..+. +....+..|+.+ +.||+|++. |+.+.+++.|+++++
T Consensus 342 p~~~~h~~~~~e~~~~~Gi~~----~liRlSvGl----Ed~~dLi~Dl~~AL~ 386 (386)
T PF01053_consen 342 PASTSHRSLSPEERAEAGISD----GLIRLSVGL----EDPDDLIADLEQALE 386 (386)
T ss_dssp TTCTTTTTSCHHHHHHTTS-T----TEEEEE--S----S-HHHHHHHHHHHHH
T ss_pred ccchhhccCChhhhhccCCCC----CeeEEEecc----CCHHHHHHHHHHhcC
Confidence 21111 123356677765 899999997 778888888887764
No 237
>PRK08637 hypothetical protein; Provisional
Probab=99.93 E-value=9.1e-24 Score=198.60 Aligned_cols=320 Identities=13% Similarity=0.078 Sum_probs=203.6
Q ss_pred HHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhC-----CCC---CcEEEeCChhHHHHHHHHHhHhhh
Q psy8850 11 PRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIY-----ADP---REIIWTSGATESNNLAIKGAAHFY 82 (397)
Q Consensus 11 ~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~-----~~~---~~i~~~~g~t~a~~~~l~~l~~~~ 82 (397)
+-+.+++.+.+.... .+ ...+|.......++|+.+++++. ..+ ++|++|+|+++|+.+++.++.
T Consensus 19 ~~~~~~~~~~~~~~~-~~----~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~--- 90 (388)
T PRK08637 19 PMYLSSLQDLLNDLT-PD----EIFPYAPPQGIPELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLFV--- 90 (388)
T ss_pred cchHHHHHHHHHhhc-cc----cccCCCCCCCCHHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHhc---
Confidence 356666666555421 11 11223334456777777776652 222 468999999999999999888
Q ss_pred ccCCCEEEEcCCCChhhHHHHH-HHhhCCcEEEEeccC-CCCCCCHHHHHHHhc----CCceEEEEecccCcccccccH-
Q psy8850 83 KKRGKHIITVQTEHKSVLDSIR-KLENDGFRVTYLKPK-NNGLITLSQLEEKIC----SDTILVSVMLVNNEIGVIQPI- 155 (397)
Q Consensus 83 ~~~g~~vl~~~~~~~s~~~~~~-~~~~~g~~v~~v~~~-~~~~~d~~~l~~~i~----~~~~~v~~~~~~~~tG~~~~l- 155 (397)
++||.|++.+|+|+.+...+. .. |.+++.+|.. +++.+|+++++++++ +.+.++++++||||||.+++.
T Consensus 91 -~~gd~Vlv~~P~y~~~~~~~~~~~---g~~vv~v~~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~~s~~ 166 (388)
T PRK08637 91 -DQGDTVLLPDHNWGNYKLTFNTRR---GAEIVTYPIFDEDGGFDTDALKEALQAAYNKGKVIVILNFPNNPTGYTPTEK 166 (388)
T ss_pred -CCCCEEEEcCCCCccHHHHHHHhc---CCEEEEecccCCCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCHH
Confidence 799999999999999987654 34 8999999983 455689999999886 455677888999999999984
Q ss_pred --HHHHHHHHh-----cCcEEEEecccccCc----cccc----cCcc-ccc--EEEeccccccCCCC--ceEEEEec---
Q psy8850 156 --LEIGELCRS-----KGVIFHCDAAQAVGK----IDIN----IQNY-KVD--LMSFSAHKIYGPKG--IGALYIRR--- 212 (397)
Q Consensus 156 --~~i~~l~~~-----~gi~livD~a~~~~~----~~~~----~~~~-~~d--~~~~s~~K~~g~~g--~g~~~~~~--- 212 (397)
++|+++|++ |+++||+|++|.... ...+ +... +.. +.+.|++|.++.+| +|++++..
T Consensus 167 ~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~~~~~ 246 (388)
T PRK08637 167 EATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITFGTKAG 246 (388)
T ss_pred HHHHHHHHHHHHHhcCCcEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEEccccC
Confidence 567777765 899999999986221 1111 1111 121 23459999555445 78887653
Q ss_pred ---CCCCccccccccCCccccccCCCCchhHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhhhc---CcEEEeC
Q psy8850 213 ---NPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRL--ARIEMKEELKRILFLQKRLYNGLMESI---EEIYING 284 (397)
Q Consensus 213 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~--~~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~~~ 284 (397)
+..+.+....... ........+.....++..+++. +..++.+....++++.+.+.+.|.. . +++.+..
T Consensus 247 ~~~~l~~~~~~~~~~~---~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~l~~-~~~~~~~~~~~ 322 (388)
T PRK08637 247 SSQTVKEALEKKVKGL---IRSNISNGPHPSQSAVLRALNSPEFDKEKQEKFQILKERYEKTKEVLYD-GKYDDAWQAYP 322 (388)
T ss_pred CcHHHHHHHHHHHHHH---hhcccCCCCcHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHh-hCCCCCccccc
Confidence 2222222110000 0001112333444444455532 2233455566677777788888866 3 1344444
Q ss_pred CCCCCCCceEEEEecCCChHHHHHHhC---CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHH
Q psy8850 285 DMNNRIPHNLNISFNFIEGESLLMAIK---DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDF 361 (397)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~l~---~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~ 361 (397)
+.+ +.++++.+++.++.++.+.+. ||.+... .++++||+++. .+.+++++
T Consensus 323 ~~~---g~~~~~~l~~~~~~~l~~~l~~~~gv~~~~~-----------------------~~~~iRi~~~~-~~~~~i~~ 375 (388)
T PRK08637 323 FNS---GYFMCLKLKGVDAEELRVHLLEKYGIGTIAL-----------------------NETDLRIAFSC-VEEEDIPE 375 (388)
T ss_pred ccc---eEEEEecCChHHHHHHHHHHhhhcceEEEec-----------------------cCCceEEEeec-CCHHHHHH
Confidence 322 445666666445567777762 6765421 13789999986 67999999
Q ss_pred HHHHHHHHHHHH
Q psy8850 362 TIKLLKMKVKKL 373 (397)
Q Consensus 362 ~~~~l~~~~~~~ 373 (397)
++++|.++++.+
T Consensus 376 ~~~~l~~~~~~~ 387 (388)
T PRK08637 376 LFDSIYKAIKDL 387 (388)
T ss_pred HHHHHHHHHHhc
Confidence 999999988765
No 238
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.93 E-value=1.2e-23 Score=193.32 Aligned_cols=267 Identities=13% Similarity=0.050 Sum_probs=187.8
Q ss_pred HHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCC
Q psy8850 44 EKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGL 123 (397)
Q Consensus 44 ~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~ 123 (397)
..+++.|+++++. ++|++|+|+++|+.+++. . .+||+|++.+|+|+.+...++.+ |.+++.+|.+
T Consensus 52 ~~Lr~~ia~~~~~--~~I~it~Gs~~al~~~~~--~----~~gd~v~v~~P~y~~~~~~~~~~---g~~~~~v~~~---- 116 (330)
T PRK05664 52 DGLEAAARAYYGA--PQLLPVAGSQAAIQALPR--L----RAPGRVGVLSPCYAEHAHAWRRA---GHQVRELDEA---- 116 (330)
T ss_pred HHHHHHHHHHhCC--CCEEECcCHHHHHHHHHH--c----cCCCEEEEcCCChHHHHHHHHHc---CCeEEEechh----
Confidence 6789999999986 489999999999988753 3 58999999999999999888887 9999988754
Q ss_pred CCHHHHHHHhcCCceEEEEecccCcccccccH---HHHHHHHHhcCcEEEEecccccCcc--c-cccCcccccEEEeccc
Q psy8850 124 ITLSQLEEKICSDTILVSVMLVNNEIGVIQPI---LEIGELCRSKGVIFHCDAAQAVGKI--D-INIQNYKVDLMSFSAH 197 (397)
Q Consensus 124 ~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l---~~i~~l~~~~gi~livD~a~~~~~~--~-~~~~~~~~d~~~~s~~ 197 (397)
++++++ ++++++++++|+||||.+++. ++|+++|+++|++||+|++|..... + .++...+..+++.|++
T Consensus 117 ----~~~~~~-~~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~~s~~~~~~~~~vi~~~SfS 191 (330)
T PRK05664 117 ----EVEAAL-DSLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNTPQHSLAACAHRPGLIVLRSFG 191 (330)
T ss_pred ----hHhhhh-cCCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccCCCcccccccccCCCEEEEeecc
Confidence 355555 367888999999999999995 4566667899999999999863321 1 1222123458899999
Q ss_pred cccCCCC--ceEEEEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy8850 198 KIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLME 275 (397)
Q Consensus 198 K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~ 275 (397)
|.+|.+| +|+++++++....+...... ...+.....+...+++.. ...++.++.+.++++++.+.|++
T Consensus 192 K~~gl~GlRiG~~v~~~~l~~~~~~~~~~---------~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~~~r~~l~~~L~~ 261 (330)
T PRK05664 192 KFFGLAGARLGFVLAEPALLRALAELLGP---------WTVSGPTRWLAQAALADT-PWQRRQRERLLAASQRLAALLRR 261 (330)
T ss_pred ccccCCCcceEEEEeCHHHHHHHHHhcCC---------CCCCHHHHHHHHHHHhCh-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 9766445 79999887665555433211 112223333444555432 23566788888999999999998
Q ss_pred hcCcEEEeCCCCCCCCceEEEEecCCChHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCC
Q psy8850 276 SIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRF 353 (397)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~ 353 (397)
+ ++. +.+ ....++++.++ +..++.+.|. ||.+.. |.. .++|||+++.
T Consensus 262 -~-~~~---~~~-~~~~f~~~~~~--~~~~~~~~l~~~gi~v~~---f~~-------------------~~~iRis~~~- 310 (330)
T PRK05664 262 -H-GLT---PAG-GCALFQWVRTE--DAAALHEFLARRGILTRL---FEQ-------------------PASLRFGLPA- 310 (330)
T ss_pred -C-CCc---ccC-CcceEEEEecC--CHHHHHHHHHHCCeEEEE---CCC-------------------CCeEEEECCC-
Confidence 4 432 111 11234444443 5667777765 888852 111 2789999985
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q psy8850 354 TTEKEIDFTIKLLKMKVKK 372 (397)
Q Consensus 354 ~~~~~i~~~~~~l~~~~~~ 372 (397)
+.++++++.++|+++.++
T Consensus 311 -~~~~~~~l~~al~~~~~~ 328 (330)
T PRK05664 311 -DEADWARLDQALLAYRKE 328 (330)
T ss_pred -CHHHHHHHHHHHHHHHhh
Confidence 678899999999877654
No 239
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.93 E-value=2.1e-23 Score=194.23 Aligned_cols=323 Identities=15% Similarity=0.090 Sum_probs=227.4
Q ss_pred CCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhh-------
Q psy8850 9 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHF------- 81 (397)
Q Consensus 9 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~------- 81 (397)
-+|+++++..+.+.++...+. ....-........++++.|++++|.+ ..++.++|..|+..++.++...
T Consensus 117 ~~p~v~~a~~~ai~~yG~g~~--gSrl~~G~~~~h~~LE~~LA~f~g~e--~all~sSGy~AN~~~i~aL~~~~~~~~~~ 192 (476)
T PLN02955 117 SHPTISNAAANAAKEYGMGPK--GSALICGYTTYHRLLESSLADLKKKE--DCLVCPTGFAANMAAMVAIGSVASLLAAS 192 (476)
T ss_pred CCHHHHHHHHHHHHHcCCCCC--CcCccccChHHHHHHHHHHHHHHCCC--cEEEECChHHHHHHHHHHHhhcccccccc
Confidence 478999999999987542222 12222233457889999999999987 5777788888999998887311
Q ss_pred ---hccCCCEEEEcCCCChhhHHHHHHHhhC-CcEEEEeccCCCCCCCHHHHHHHhcC---CceEEEEecccCccccccc
Q psy8850 82 ---YKKRGKHIITVQTEHKSVLDSIRKLEND-GFRVTYLKPKNNGLITLSQLEEKICS---DTILVSVMLVNNEIGVIQP 154 (397)
Q Consensus 82 ---~~~~g~~vl~~~~~~~s~~~~~~~~~~~-g~~v~~v~~~~~~~~d~~~l~~~i~~---~~~~v~~~~~~~~tG~~~~ 154 (397)
..++++.|+.....|.|....+...... +.++..++.+ |+++|++++.. +.++|+++...++.|.+.|
T Consensus 193 ~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~HN-----D~~~Le~~L~~~~~~~~~Vv~EgV~SmdGdiap 267 (476)
T PLN02955 193 GKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRHC-----DMYHLNSLLSSCKMKRKVVVTDSLFSMDGDFAP 267 (476)
T ss_pred ccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeCCC-----CHHHHHHHHHhCCCCceEEEEeCCCCCCCCcCC
Confidence 0145678999999999999998876443 4777777766 89999988853 4578889999999999999
Q ss_pred HHHHHHHHHhcCcEEEEecccccCcccc---------ccCcccccEEEeccccccCCCCceEEEEecCCCCccccccccC
Q psy8850 155 ILEIGELCRSKGVIFHCDAAQAVGKIDI---------NIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGG 225 (397)
Q Consensus 155 l~~i~~l~~~~gi~livD~a~~~~~~~~---------~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~~~~~~~~ 225 (397)
+++|.++|++||+.+|+|++|++|.... ++. .+.|+++.|++|.+|..| |++.++++..+.+......
T Consensus 268 L~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~-~di~ii~~TLsKA~G~~G-Gfi~gs~~~~~~l~~~~~~- 344 (476)
T PLN02955 268 MEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCE-ADVDLCVGTLSKAAGCHG-GFIACSKKWKQLIQSRGRS- 344 (476)
T ss_pred HHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCC-CCCcEEEEeCccchhccC-ceeecHHHHHHHHHHhCCC-
Confidence 9999999999999999999999665422 221 267899999999888765 8998887655544432111
Q ss_pred CccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecC-CChH
Q psy8850 226 GHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF-IEGE 304 (397)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 304 (397)
..|. +..+....++..++++.+... +.+++++.++.+++++.+ ++.+ . ..++.+.+.. ....
T Consensus 345 ---~ifS-talpp~~aaa~laal~l~~~~-~~~r~~L~~n~~~fr~~~-----G~~~----~---sPI~pI~ig~~~~a~ 407 (476)
T PLN02955 345 ---FIFS-TAIPVPMAAAAYAAVVVARKE-KWRRKAIWERVKEFKALS-----GVDI----S---SPIISLVVGNQEKAL 407 (476)
T ss_pred ---Ceec-ccccHHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHhc-----CCCC----C---CCEEEEEeCCHHHHH
Confidence 1111 234445555666788877543 346677777777777632 2221 1 3455555543 2345
Q ss_pred HHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHHHhc
Q psy8850 305 SLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKLREL 376 (397)
Q Consensus 305 ~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~ 376 (397)
.+.+.|. |+.+.+-.+.. .+.+...+||+++..++++||++++++|.++.+.+..+
T Consensus 408 ~~~~~L~~~Gi~v~~i~yPt----------------VP~g~~rLRi~lsA~Ht~edId~lv~~L~~~~~~~~~~ 465 (476)
T PLN02955 408 KASRYLLKSGFHVMAIRPPT----------------VPPNSCRLRVTLSAAHTTEDVKKLITALSSCLDFDNTA 465 (476)
T ss_pred HHHHHHHHCCCEEEEECCCC----------------CCCCCceEEEeeCCCCCHHHHHHHHHHHHHHHhhhcce
Confidence 5677775 77776543221 12334679999999999999999999999987666443
No 240
>PRK10534 L-threonine aldolase; Provisional
Probab=99.93 E-value=7.1e-24 Score=195.66 Aligned_cols=301 Identities=14% Similarity=0.153 Sum_probs=197.3
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCC
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGK 87 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~ 87 (397)
.|+|.+.+++.+...... . |.......++++.|++++|.++ +.+++||++++..++.++. .+|+
T Consensus 11 ~p~~~~~~a~~~~~~~~~------~----Y~~~~~~~~L~~~la~~~g~~~--~~v~~~g~~a~~~~l~~~~----~~gd 74 (333)
T PRK10534 11 RPSRAMLEAMMAAPVGDD------V----YGDDPTVNALQDYAAELSGKEA--ALFLPTGTQANLVALLSHC----ERGE 74 (333)
T ss_pred CCCHHHHHHHHhccCCCc------c----cCCCHHHHHHHHHHHHHhCCCe--EEEeCchHHHHHHHHHHhc----CCCC
Confidence 378899999876443211 1 1224468899999999999874 4678888888888877766 7899
Q ss_pred EEEEcCCCChhhHHH--HHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcC------CceEEEEecccCcccccccHH---
Q psy8850 88 HIITVQTEHKSVLDS--IRKLENDGFRVTYLKPKNNGLITLSQLEEKICS------DTILVSVMLVNNEIGVIQPIL--- 156 (397)
Q Consensus 88 ~vl~~~~~~~s~~~~--~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~------~~~~v~~~~~~~~tG~~~~l~--- 156 (397)
+|+++.+.|...... .... .+.+++.++.+.++.+|+++|++++++ ++++|++++++ +|.+.|.+
T Consensus 75 ~vi~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G~v~~~~~l~ 150 (333)
T PRK10534 75 EYIVGQAAHNYLYEAGGAAVL--GSIQPQPIDAAADGTLPLDKVAAKIKPDDIHFARTRLLSLENTH--NGKVLPREYLK 150 (333)
T ss_pred eeEEechhhhhHhcCCchHHh--cCceEEeecCCCCCCCCHHHHHHhhcccCcCcccceEEEEecCC--CCeecCHHHHH
Confidence 999888877543322 1222 136778888777788999999999976 58899998655 69999965
Q ss_pred HHHHHHHhcCcEEEEecccccCcc---ccccC--cccccEEEeccccccCCCCce-EEEEecCCCCccccccccCCcccc
Q psy8850 157 EIGELCRSKGVIFHCDAAQAVGKI---DINIQ--NYKVDLMSFSAHKIYGPKGIG-ALYIRRNPRTRIEAQIHGGGHEYG 230 (397)
Q Consensus 157 ~i~~l~~~~gi~livD~a~~~~~~---~~~~~--~~~~d~~~~s~~K~~g~~g~g-~~~~~~~~~~~~~~~~~~~~~~~~ 230 (397)
+|.++|++||++|++|++|.++.. ..... ....|.++.|+||.+|.. .| +++.+++..+.+......+
T Consensus 151 ~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~~~~~~~~~s~SK~~~~~-~G~~~~~~~~~i~~~~~~~~~~----- 224 (333)
T PRK10534 151 QAWEFTRERNLALHVDGARIFNAVVAYGCELKEITQYCDSFTICLSKGLGTP-VGSLLVGNRDYIKRARRWRKMT----- 224 (333)
T ss_pred HHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHHHHhcCCEEEEEeEcCCCCc-ccceEEcCHHHHHHHHHHHHHh-----
Confidence 556789999999999999774321 11110 012466667899966653 46 5767776655554332210
Q ss_pred ccCCCCch--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCChHHHHH
Q psy8850 231 LRSGTLAT--HQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLM 308 (397)
Q Consensus 231 ~~~~~~~~--~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (397)
.+..+. ....+..++++. ..+..++..+.++++.+.|++ + ++.+..+ . .+++.+.++..+..++.+
T Consensus 225 --~~~~~~~~~~~a~~~~~l~~----~~~~~~~~~~~r~~l~~~L~~-~-g~~~~~~-~---~nfv~~~~~~~~~~~~~~ 292 (333)
T PRK10534 225 --GGGMRQAGILAAAGLYALKH----NVARLQEDHDNAAWLAEQLRE-A-GADVMRQ-D---TNMLFVRVGEEQAAALGE 292 (333)
T ss_pred --CCchhhHHHHHHHHHHHHHh----hHHHHHHHHHHHHHHHHHHHh-C-CCccCCC-C---ceEEEEECCchhHHHHHH
Confidence 001111 112211223332 123334455567899999998 4 6665543 2 456666665334556666
Q ss_pred HhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHH
Q psy8850 309 AIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVK 371 (397)
Q Consensus 309 ~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 371 (397)
.|. ||.+.++ ..+|++...-++++++++++++|++++.
T Consensus 293 ~l~~~gi~v~~~-------------------------~~~rl~~~~r~t~e~~~~~~~~l~~~~~ 332 (333)
T PRK10534 293 YMRERNVLINAS-------------------------PIVRLVTHLDVSREQLAEVVAHWRAFLA 332 (333)
T ss_pred HHHHcCeeecCC-------------------------ceEEEEEEeCCCHHHHHHHHHHHHHHhc
Confidence 665 8888765 3578877655789999999999987654
No 241
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.93 E-value=2.9e-23 Score=208.89 Aligned_cols=324 Identities=12% Similarity=0.076 Sum_probs=234.7
Q ss_pred CCCCCCC----CCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHH
Q psy8850 2 DYSATTP----IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKG 77 (397)
Q Consensus 2 ~~~~~~~----~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~ 77 (397)
|+.+.+. .|+.+.+++.+...-+-.+.-. +.-.+...-+.+.+++..++++.|++++++.++.++|.+.++++++
T Consensus 106 ~fiG~G~y~~~~P~~v~~~i~~~~~~~TaytPY-qaEisQG~lqal~~~Qt~ia~LtG~~~anaSL~d~aTAaaea~~~a 184 (993)
T PLN02414 106 SYIGMGYYNTHVPPVILRNILENPGWYTQYTPY-QAEIAQGRLESLLNYQTMITDLTGLPMSNASLLDEGTAAAEAMAMC 184 (993)
T ss_pred cccCCCCCCccCCHHHHHHHHhChHHHhhcCCC-chHHHHHHHHHHHHHHHHHHHHhCCChhhEeecCChHHHHHHHHHH
Confidence 5566666 7888878887655422211111 1111234446788999999999999999999999999999988887
Q ss_pred hHhhhccCCCEEEEcCCCChhhHHHHHHHhh-CCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHH
Q psy8850 78 AAHFYKKRGKHIITVQTEHKSVLDSIRKLEN-DGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPIL 156 (397)
Q Consensus 78 l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~-~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~ 156 (397)
... ..+++++|++++.+|+++...+....+ .|++++.+|.+... ...+.+..++ .+..|.+|.+.|++
T Consensus 185 ~~~-~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~~---------~~~~~v~~vl-vq~P~~~G~v~dv~ 253 (993)
T PLN02414 185 NNI-LKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDFD---------YSSGDVCGVL-VQYPATDGEVLDYA 253 (993)
T ss_pred Hhc-ccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhhc---------cccCceEEEE-EecCCCCeEEcCHH
Confidence 643 112458899999999999999887654 49999999875311 1122333443 44445689999999
Q ss_pred HHHHHHHhcCcEEEEecccccCcccc-ccCcccccEEEeccccccCCCC-----ceEEEEecCCCCccccccccCC----
Q psy8850 157 EIGELCRSKGVIFHCDAAQAVGKIDI-NIQNYKVDLMSFSAHKIYGPKG-----IGALYIRRNPRTRIEAQIHGGG---- 226 (397)
Q Consensus 157 ~i~~l~~~~gi~livD~a~~~~~~~~-~~~~~~~d~~~~s~~K~~g~~g-----~g~~~~~~~~~~~~~~~~~~~~---- 226 (397)
+|+++||++|+++++ +++..+...+ +..++++|+++++.|||++|.| .|+++++++....+...+.|+.
T Consensus 254 ~I~~~ah~~GaL~iV-aad~lal~~l~~pge~GADi~vgsgqKwg~P~G~GGP~aGflavr~~~~r~~PgriVG~s~d~~ 332 (993)
T PLN02414 254 EFVKNAHANGVKVVM-ATDLLALTMLKPPGEWGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRLMPGRIIGVSVDSS 332 (993)
T ss_pred HHHHHHHHcCCEEEE-EECHHHhcCCCCHhhccCcEEEECCCccccCCCCCCCCeeEEEECHHHHhhCCCcccCcccCCC
Confidence 999999999999999 8888777666 4778899999999999765444 7999999876554443333321
Q ss_pred -------------ccccccCCCCchhHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCC
Q psy8850 227 -------------HEYGLRSGTLATHQIVGMGEAFRLA------RIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMN 287 (397)
Q Consensus 227 -------------~~~~~~~~~~~~~~~~~l~~al~~~------~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 287 (397)
+..+++.++.|.....++.+++... ..|++++.+++.+++.++.+.|++ .++.+..++
T Consensus 333 g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~--~G~~~~~~~- 409 (993)
T PLN02414 333 GKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKK--LGFQVQSLP- 409 (993)
T ss_pred CCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhh--cCCccCCCC-
Confidence 1234668899987777776666533 247899999999999999999987 567765542
Q ss_pred CCCCceEEEEecCCChHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHH
Q psy8850 288 NRIPHNLNISFNFIEGESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKL 365 (397)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~ 365 (397)
....+.|.++ +..++.+.|. ||.+... ..+.+|+|+..++|++|||+++++
T Consensus 410 --~f~~vt~~~~--~~~~v~~~L~~~gI~l~~~-----------------------~~~~lrvs~~e~~T~edId~L~~~ 462 (993)
T PLN02414 410 --FFDTVKVKCS--DADAIADAAAKVGINLRVV-----------------------DANTVTVSFDETTTLEDVDKLFKV 462 (993)
T ss_pred --CcCeEEEecC--CHHHHHHHHHHCCCeeEEe-----------------------cCCeEEEEeeccCCHHHHHHHHHH
Confidence 2446666654 4567777776 6655421 126799999999999999999999
Q ss_pred HHH
Q psy8850 366 LKM 368 (397)
Q Consensus 366 l~~ 368 (397)
|..
T Consensus 463 l~~ 465 (993)
T PLN02414 463 FAG 465 (993)
T ss_pred Hcc
Confidence 973
No 242
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.93 E-value=9.6e-24 Score=194.96 Aligned_cols=302 Identities=17% Similarity=0.130 Sum_probs=201.7
Q ss_pred CcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHHhhC-C
Q psy8850 32 NHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLEND-G 110 (397)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~-g 110 (397)
.+.+++...+...+++++++++.+.+ ++++++||++|+.+++. +. ++||+|+++.+.|......+...... +
T Consensus 45 ~~~Y~R~~~p~~~~le~~lA~leg~~--~~v~~~sG~aAi~~~l~-~l----~~GD~VI~~~~~yg~~~~~~~~~~~~~~ 117 (364)
T PRK07269 45 GFDYTRTKNPTRAKLEETLAAIESAD--YALATSSGMSAIVLAFS-VF----PVGSKVVAVRDLYGGSFRWFNQQEKEGR 117 (364)
T ss_pred CcceeCCCCccHHHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHH-Hh----CCCCEEEEecCCcCchHHHHHHHHhcCc
Confidence 34555666678899999999999865 79999999999999885 44 79999999999998877554544332 3
Q ss_pred cEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCccccccCccccc
Q psy8850 111 FRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVD 190 (397)
Q Consensus 111 ~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d 190 (397)
.++.+ .+|+++++++++++|++|++++|+||+|.+.|+++|+++|+++|+++++|++++.+... .....++|
T Consensus 118 ~~~~~-------~~d~~~l~~~i~~~TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD~t~~~~~~~-~pl~~gaD 189 (364)
T PRK07269 118 FHFTY-------ANTEEELIAAIEEDTDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVDNTFYSPIYQ-RPIELGAD 189 (364)
T ss_pred EEEEe-------cCCHHHHHHhcCcCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccC-CchhhCCc
Confidence 33222 24899999999999999999999999999999999999999999999999998755432 22345899
Q ss_pred EEEeccccc-cCCCC--ceEEEEecC-CCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8850 191 LMSFSAHKI-YGPKG--IGALYIRRN-PRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQ 266 (397)
Q Consensus 191 ~~~~s~~K~-~g~~g--~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~ 266 (397)
++++|++|+ .|... .|+++.+++ ..+++..... ......+....+-+...|+ .++.+.++..+++
T Consensus 190 ivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~~-------~~G~~~s~~~a~l~~~~L~----tL~~r~~~~~~na 258 (364)
T PRK07269 190 IVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFYNLN-------TTGAVLSPFDSYLLMRGLK----TLSLRMERSTANA 258 (364)
T ss_pred EEEecCceeccCCCcccceEEEeCcHHHHHHHHHHHH-------HhCCCCCHHHHHHHHcCCC----cHHHHHHHHHHHH
Confidence 999999994 44332 477776543 3233321110 0011222222222222333 3566778889999
Q ss_pred HHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCC-ChHHHHHHhC--CcEecccCccC----CCCCCh----hhHHHhh
Q psy8850 267 KRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFI-EGESLLMAIK--DIAVSSGSACT----SASLEP----SYVLRAL 335 (397)
Q Consensus 267 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~--~i~~~~g~~~~----~~~~~~----~~~~~~~ 335 (397)
.++.+.|++ .|.+..+.-++ .++++.|.+.+. ....+.+.++ .+..+-|...+ |..+.+ .......
T Consensus 259 ~~~a~~L~~-~p~v~~v~ypg--~gg~~sf~~~~~~~~~~f~~~l~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~r~~~ 335 (364)
T PRK07269 259 QEVVAFLKK-SPAVKEVLYTG--KGGMISFKVADETRIPHILNSLKVFTFAESLGGVESLITYPTTQTHADIPAEVRHSY 335 (364)
T ss_pred HHHHHHHHh-CCCccEEeCCC--cCcEEEEEECCHHHHHHHHHhCCcceEccCCCCcCeEeeCCcccccccCCHHHHHhc
Confidence 999999988 77754443222 266778877531 1234555555 33344333222 221111 1222345
Q ss_pred CCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHH
Q psy8850 336 GCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKV 370 (397)
Q Consensus 336 g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~ 370 (397)
|+.+ +.||+|++. |+++.+++.|.+++
T Consensus 336 Gi~~----~liRlsvGl----E~~~dli~dl~~al 362 (364)
T PRK07269 336 GLTD----DLLRLSIGI----EDARDLIADLKQAL 362 (364)
T ss_pred CCCC----CeEEEEecc----CCHHHHHHHHHHHh
Confidence 5554 899999997 67777777777765
No 243
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.93 E-value=5.1e-23 Score=193.76 Aligned_cols=320 Identities=15% Similarity=0.184 Sum_probs=204.8
Q ss_pred CCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccC
Q psy8850 6 TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKR 85 (397)
Q Consensus 6 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~ 85 (397)
.+..+|.+.+++.+++....... . . ...+...++.+.|+++.+. +++++++||++|++.+++++......+
T Consensus 45 lGh~~p~v~~a~~~~~~~~~~~~-~-~-----~~~~~~~~la~~l~~~~~~--~~v~~~~sGseA~~~al~~ar~~~~~~ 115 (389)
T PRK01278 45 LGHAHPHLVEALKEQAEKLWHVS-N-L-----YRIPEQERLAERLVENSFA--DKVFFTNSGAEAVECAIKTARRYHYGK 115 (389)
T ss_pred CCCCCHHHHHHHHHHHHhcCccc-c-c-----cCChHHHHHHHHHHhhCCC--CEEEEcCCcHHHHHHHHHHHHHHHHhc
Confidence 34568999999999987622111 1 1 1123456788888887743 589999999999999999775433344
Q ss_pred CC----EEEEcCCCChhhHHHHHHHhhCCcEEE-EeccCCCC----CCCHHHHHHHhcCCceEEEEecccCcccc-ccc-
Q psy8850 86 GK----HIITVQTEHKSVLDSIRKLENDGFRVT-YLKPKNNG----LITLSQLEEKICSDTILVSVMLVNNEIGV-IQP- 154 (397)
Q Consensus 86 g~----~vl~~~~~~~s~~~~~~~~~~~g~~v~-~v~~~~~~----~~d~~~l~~~i~~~~~~v~~~~~~~~tG~-~~~- 154 (397)
|+ +|++.++.|++................ ..|..++. ..|++++++++++++++|+++.+++++|. .+|
T Consensus 116 G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~avivep~~~~~G~~~~~~ 195 (389)
T PRK01278 116 GHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAITPNTAAILIEPIQGEGGIRPAPD 195 (389)
T ss_pred CCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhCCCeEEEEEecccCCCCCcCCCH
Confidence 44 899999888888766554421100000 01111111 25899999999889999999999999984 444
Q ss_pred --HHHHHHHHHhcCcEEEEecccc-cCcc----ccccCcccccEEEecccc-ccCCCCceEEEEecCCCCccccccccCC
Q psy8850 155 --ILEIGELCRSKGVIFHCDAAQA-VGKI----DINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEAQIHGGG 226 (397)
Q Consensus 155 --l~~i~~l~~~~gi~livD~a~~-~~~~----~~~~~~~~~d~~~~s~~K-~~g~~g~g~~~~~~~~~~~~~~~~~~~~ 226 (397)
+++|.++|++||+++|+|++|+ ++.. ..+.....+|+++ ++| +.++..+|+++++++..+.+.....+
T Consensus 196 ~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~t--~sK~l~~G~~ig~~~~~~~~~~~~~~~~~~-- 271 (389)
T PRK01278 196 EFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFAHEWAGVTPDIMA--VAKGIGGGFPLGACLATEEAAKGMTPGTHG-- 271 (389)
T ss_pred HHHHHHHHHHHHcCCEEEEeccccCCCcCCcceeecccCCCCCEEE--EehhccCCcceEEEEEcHHHHhccCCCCCC--
Confidence 7899999999999999999987 2211 1112233567654 559 54333489999987665554332211
Q ss_pred ccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---cCcEEEeCCCCCCCCceEEEEecCCCh
Q psy8850 227 HEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMES---IEEIYINGDMNNRIPHNLNISFNFIEG 303 (397)
Q Consensus 227 ~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (397)
...+ .+....++..++++.+.+ ....+++.++.+++++.|++. .+++ ..... ..+.++.+.+.. +.
T Consensus 272 ----~t~~-~~~~~~aaa~a~l~~l~~--~~~~~~~~~~~~~l~~~l~~l~~~~~~~--~~~v~-g~G~~~~i~~~~-~~ 340 (389)
T PRK01278 272 ----STYG-GNPLAMAVGNAVLDVILA--PGFLDNVQRMGLYLKQKLEGLVDRFPDV--IEEVR-GKGLLLGLKCVV-PN 340 (389)
T ss_pred ----CCCC-ccHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHHHHHhhCCCc--eeeEe-cccEEEEEEEec-CH
Confidence 2223 344555555577877643 234455666666666666541 2221 11111 113344555542 46
Q ss_pred HHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHH
Q psy8850 304 ESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKK 372 (397)
Q Consensus 304 ~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 372 (397)
.++...|. ||.+.++. .+.+||+++..++++++++++++|.+++++
T Consensus 341 ~~~~~~l~~~GV~~~p~~-----------------------~~~lR~~p~~~~~~~~i~~~l~~l~~~l~~ 388 (389)
T PRK01278 341 RDLVQALRDEGLLTVGAG-----------------------DNVVRLLPPLIITEEEIDEALERLERAAES 388 (389)
T ss_pred HHHHHHHHHCCeEEeecC-----------------------CCEEEEeCCcccCHHHHHHHHHHHHHHHHh
Confidence 67776665 78776651 278999998888999999999999988764
No 244
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.93 E-value=5.1e-23 Score=194.69 Aligned_cols=313 Identities=16% Similarity=0.176 Sum_probs=209.3
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhc----
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYK---- 83 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~---- 83 (397)
..+|.+.+++.+++.... ...+ . ...+...++++.++++++.+ .+++++||++|++.+++.+.....
T Consensus 57 h~~~~i~~a~~~~~~~~~-~~~~---~---~~~~~~~~l~~~l~~~~~~~--~~~~~~SGs~A~e~al~~a~~~~~~~~g 127 (401)
T PRK00854 57 HCHPKILAAMVEQAGRLT-LTSR---A---FRNDQLAPLYEELAALTGSH--KVLPMNSGAEAVETAIKAVRKWGYEVKG 127 (401)
T ss_pred CCCHHHHHHHHHHHhhcc-cccc---c---cCCHHHHHHHHHHHhhCCCC--EEEEeCCcHHHHHHHHHHHHHHHHhccC
Confidence 458999999999997632 1111 0 11346778999999998864 799999999999999998754210
Q ss_pred --cCCCEEEEcCCCChhhHHHHHHHhh----------CCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccc
Q psy8850 84 --KRGKHIITVQTEHKSVLDSIRKLEN----------DGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGV 151 (397)
Q Consensus 84 --~~g~~vl~~~~~~~s~~~~~~~~~~----------~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~ 151 (397)
..+++|++....|++.......+.. ....+..+|. .|++++++++.+++++|++++++||+|.
T Consensus 128 ~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~i~~~~~aii~e~~~~~~G~ 202 (401)
T PRK00854 128 VPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVPF-----GDAEALEAAITPNTVAFLVEPIQGEAGV 202 (401)
T ss_pred CCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeCC-----CCHHHHHHHhCCCeEEEEEccccCCCCC
Confidence 1225666666666554433332210 0122333433 3899999999999999999999999999
Q ss_pred ccc----HHHHHHHHHhcCcEEEEecccc-cCccc--c--ccCcccccEEEecccc-ccCC-CCceEEEEecCCCCcccc
Q psy8850 152 IQP----ILEIGELCRSKGVIFHCDAAQA-VGKID--I--NIQNYKVDLMSFSAHK-IYGP-KGIGALYIRRNPRTRIEA 220 (397)
Q Consensus 152 ~~~----l~~i~~l~~~~gi~livD~a~~-~~~~~--~--~~~~~~~d~~~~s~~K-~~g~-~g~g~~~~~~~~~~~~~~ 220 (397)
+.| +++|.++|++||+++|+|++|+ +|... + +.....+|++++| | +.|. ..+|+++.+++....+..
T Consensus 203 ~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~~~~~~~g~~~D~~~~~--K~l~gg~~~ig~v~~~~~~~~~l~~ 280 (401)
T PRK00854 203 IIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKLLAEEHEGIEADVTLIG--KALSGGFYPVSAVLSNSEVLGVLKP 280 (401)
T ss_pred cCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCchHhHHhhcCCCCCEEEec--ccccCCccCeEEEEEcHHHHhcccC
Confidence 987 8999999999999999999998 44322 1 1222357888876 9 5443 237889988776665543
Q ss_pred ccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecC
Q psy8850 221 QIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF 300 (397)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (397)
...+ ...+ .+....++..++|+.+.+ ....++++++.+++.+.|++ +.. ...... ...+.++.+.+..
T Consensus 281 ~~~~------~t~~-~~~~~~aa~~a~L~~l~~--~~~~~~~~~~~~~l~~~L~~-~~~-~~~~~~-~g~g~~~~i~~~~ 348 (401)
T PRK00854 281 GQHG------STFG-GNPLACAVARAALKVLTE--EGMIENAAEMGAYFLEGLRS-IRS-NIVREV-RGRGLMLAVELEP 348 (401)
T ss_pred CCCC------CCCC-cCHHHHHHHHHHHHHHHH--cCHHHHHHHHHHHHHHHHHh-hcc-CceEEE-eccceEEEEEEec
Confidence 2211 1222 244555666678876654 34678888889999999987 432 111110 1114444555532
Q ss_pred --CChHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHH
Q psy8850 301 --IEGESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVK 371 (397)
Q Consensus 301 --~~~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 371 (397)
.+..++.+.|. ||.+.+. ..+.+|++++..+++++|++++++|++++.
T Consensus 349 ~~~~~~~~~~~L~~~GV~v~~~-----------------------~~~~lR~~p~~~~t~e~i~~~i~~l~~~l~ 400 (401)
T PRK00854 349 EAGGARQYCEALKERGLLAKDT-----------------------HDHTIRLAPPLVITREQVDWALEQIAKVLA 400 (401)
T ss_pred CchhHHHHHHHHHHCCeEEecC-----------------------CCCEEEEeCCcccCHHHHHHHHHHHHHHhh
Confidence 23566777765 6766421 127899999988999999999999998763
No 245
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.93 E-value=3.2e-23 Score=182.29 Aligned_cols=335 Identities=19% Similarity=0.217 Sum_probs=245.1
Q ss_pred CCCCCCCHHHHHHHHHHHhhcc--CCCCCCCcchhhhHHHHHH-HHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHh
Q psy8850 4 SATTPIDPRVVDKMIPYLRVQF--GNPASRNHIYGWTAEKAIE-KARNEVAQLIYADPREIIWTSGATESNNLAIKGAAH 80 (397)
Q Consensus 4 ~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~ 80 (397)
||....++.|++++-..+...| +.|.. .|..|-...+.++ .+.+...++||++-.++... ||++|+..+..+++
T Consensus 33 ASEN~~S~aV~~A~gS~ltnKYAEGyPgk-RyYgGce~VD~vE~laierak~LFga~~anVQPh-SGs~AN~av~~All- 109 (413)
T COG0112 33 ASENFTSPAVMEAQGSDLTNKYAEGYPGK-RYYGGCEYVDEVEELAIERAKKLFGAEYANVQPH-SGSQANQAVYLALL- 109 (413)
T ss_pred eccccCCHHHHHHHhhhhhhccccCCCCc-cccCCCeeHHHHHHHHHHHHHHHhCCCccccCCC-CchHHHHHHHHHHc-
Confidence 3455678999999999888755 68877 4444445554444 48899999999986666654 56689999999999
Q ss_pred hhccCCCEEEEcCCCChhhHHHHHHHhhCC--cEEEEeccC-CCCCCCHHHHHHHhcC-CceEEEEecccCcccccccHH
Q psy8850 81 FYKKRGKHIITVQTEHKSVLDSIRKLENDG--FRVTYLKPK-NNGLITLSQLEEKICS-DTILVSVMLVNNEIGVIQPIL 156 (397)
Q Consensus 81 ~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g--~~v~~v~~~-~~~~~d~~~l~~~i~~-~~~~v~~~~~~~~tG~~~~l~ 156 (397)
+|||+|+-.+..|+++........-.| ++++.++++ +++.+|.|++++.+.+ +|++|+.-...++ ...|++
T Consensus 110 ---~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~et~~IDyD~~~k~a~e~kPK~ii~G~SaY~--r~id~~ 184 (413)
T COG0112 110 ---QPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPETGLIDYDEVEKLAKEVKPKLIIAGGSAYS--RPIDFK 184 (413)
T ss_pred ---CCCCeEecccCCCCCcccCCCCCCccceeEEeEecccccccCccCHHHHHHHHHHhCCCEEEECccccc--cccCHH
Confidence 899999988887777765542211112 567777888 6799999999998765 8999987544333 667899
Q ss_pred HHHHHHHhcCcEEEEecccccCc-----cccccCcccccEEEecccc-ccCCCCceEEEEec-CCCCccccccccCCccc
Q psy8850 157 EIGELCRSKGVIFHCDAAQAVGK-----IDINIQNYKVDLMSFSAHK-IYGPKGIGALYIRR-NPRTRIEAQIHGGGHEY 229 (397)
Q Consensus 157 ~i~~l~~~~gi~livD~a~~~~~-----~~~~~~~~~~d~~~~s~~K-~~g~~g~g~~~~~~-~~~~~~~~~~~~~~~~~ 229 (397)
++.++|.+.|+++++|.+|-.|. .+-.+. .+|+++.|.|| +.||.| |+++.++ ++..++....+.+.
T Consensus 185 ~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~--~AdvVTtTTHKTlrGPrG-G~Il~~~eel~kkin~aVFPg~--- 258 (413)
T COG0112 185 RFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLP--HADVVTTTTHKTLRGPRG-GIILTNDEELAKKINSAVFPGL--- 258 (413)
T ss_pred HHHHHHHHhCceEEehHHHHHHHHhcccCCCCCC--ccceEeCCcccCCCCCCc-eEEEeccHHHHHHhhhhcCCcc---
Confidence 99999999999999999997443 332333 49999999999 999986 9998886 45555655444332
Q ss_pred cccCCCCchhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEec--CCChHHH
Q psy8850 230 GLRSGTLATHQIVGMGEAFRLARI-EMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN--FIEGESL 306 (397)
Q Consensus 230 ~~~~~~~~~~~~~~l~~al~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 306 (397)
.|.|..+.+++...++++..+ +++++.+++..+++.|.+.|.+ .|+.+++. .+..+++.+.+. +.+..+.
T Consensus 259 ---qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~--~G~~vvsG--gTdnHl~lVDl~~~~~~Gk~a 331 (413)
T COG0112 259 ---QGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKE--RGFKVVSG--GTDNHLVLVDLRSKGLTGKKA 331 (413)
T ss_pred ---CCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHH--cCCeEecC--CccceEEEEEcccCCCCHHHH
Confidence 246777888988888887755 6899999999999999999999 89998873 334667777776 4466676
Q ss_pred HHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCC----CCHHHHHHHHHHHHHHHHH
Q psy8850 307 LMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRF----TTEKEIDFTIKLLKMKVKK 372 (397)
Q Consensus 307 ~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~----~~~~~i~~~~~~l~~~~~~ 372 (397)
...|. +|.+......+. ...+.-.+.|||..+.. ..+++++++.+.|.+++..
T Consensus 332 e~~L~~~~It~NKN~iP~D-------------~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~ 390 (413)
T COG0112 332 EAALERAGITVNKNAIPFD-------------PESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDG 390 (413)
T ss_pred HHHHHHcCEeeccCCCCCC-------------CCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHhc
Confidence 66665 666654322111 01123347799986644 3488998888888877654
No 246
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.93 E-value=1.9e-23 Score=193.80 Aligned_cols=294 Identities=14% Similarity=0.100 Sum_probs=191.6
Q ss_pred hhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHH-HhhCCcEE
Q psy8850 35 YGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRK-LENDGFRV 113 (397)
Q Consensus 35 ~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~-~~~~g~~v 113 (397)
+++...+...+++++++++. . ++.++++||+.|+..++.++. ++||+|+++++.|+.+...+.. +...|+++
T Consensus 45 y~ry~~p~~~~Le~~lA~l~--~-~~~v~~~sG~~Ai~~~l~all----~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v 117 (366)
T PRK07582 45 YGRASNPTWRALEAALGELE--G-AEALVFPSGMAAITAVLRALL----RPGDTVVVPADGYYQVRALAREYLAPLGVTV 117 (366)
T ss_pred eECCCCccHHHHHHHHHHHc--C-CCEEEECCHHHHHHHHHHHhc----CCCCEEEEeCCCcHhHHHHHHHHHhcCeEEE
Confidence 44445567889999999999 2 356777888889999998887 7999999999999888765543 34459999
Q ss_pred EEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccc--cCccccccCcccccE
Q psy8850 114 TYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQA--VGKIDINIQNYKVDL 191 (397)
Q Consensus 114 ~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~--~~~~~~~~~~~~~d~ 191 (397)
+.++.++.+ + .+.+++++|++++++||+|.+.|+++|+++|+++|+++++|++|+ .+..+++ +++|+
T Consensus 118 ~~v~~~~~~----~----~~~~~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~t~~~~~~~~p~~---~g~Di 186 (366)
T PRK07582 118 REAPTAGMA----E----AALAGADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDNTTATPLGQRPLE---LGADL 186 (366)
T ss_pred EEECCCChH----H----HhccCceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEECCCCCccccCchh---cCCcE
Confidence 999876322 1 334689999999999999999999999999999999999999985 3333433 47899
Q ss_pred EEecccc-ccCCCC--ceEEEEec-CCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8850 192 MSFSAHK-IYGPKG--IGALYIRR-NPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQK 267 (397)
Q Consensus 192 ~~~s~~K-~~g~~g--~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~ 267 (397)
++.|++| +.|+.| +|+++.++ +....+..... .....++....+.+...++ .++.+.++..+++.
T Consensus 187 vv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~~~-------~~g~~~~~~~a~l~~r~l~----tl~~R~~~~~~na~ 255 (366)
T PRK07582 187 VVASDTKALTGHSDLLLGYVAGRDPELMAAVERWRL-------LAGAIPGPFEAWLAHRSLG----TLGLRFARQCANAL 255 (366)
T ss_pred EEecccccccCCCCeeEEEEEcCcHHHHHHHHHHHH-------HhCCCCCHHHHHHHHhccc----cHHHHHHHHHHHHH
Confidence 9999999 666666 58877753 33232322111 1112233333232223333 24556678888999
Q ss_pred HHHHHHhhhcCcEEEeCCCC--------------CCCCceEEEEecCCChHHHHHHhC--Cc---EecccCccCCCCCCh
Q psy8850 268 RLYNGLMESIEEIYINGDMN--------------NRIPHNLNISFNFIEGESLLMAIK--DI---AVSSGSACTSASLEP 328 (397)
Q Consensus 268 ~l~~~l~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~l~--~i---~~~~g~~~~~~~~~~ 328 (397)
.+.+.|++ .|.+..+.-|. ...++++.|.++ +..+..+.+. ++ ...-|...+.. .
T Consensus 256 ~la~~L~~-~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~--~~~~~~~~~~~l~~~~~~~s~G~~~sl~--~- 329 (366)
T PRK07582 256 AVAELLAG-HPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA--DAAAAERFVAASRLVVAATSFGGVHTSA--D- 329 (366)
T ss_pred HHHHHHHh-CCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC--CHHHHHHHHHhCCcceecccCCCccchh--h-
Confidence 99999988 77764332111 125778888886 3444444443 22 22333322210 0
Q ss_pred hhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHH
Q psy8850 329 SYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLK 367 (397)
Q Consensus 329 ~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~ 367 (397)
.....+. ...++.||+|++....++.++.+.++|.
T Consensus 330 --~~~~~~~--~~~~~liR~svGlE~~~dli~dl~~al~ 364 (366)
T PRK07582 330 --RRARWGD--AVPEGFVRLSCGIEDTDDLVADLERALD 364 (366)
T ss_pred --hHHHcCC--CCCCCeEEEEeccCCHHHHHHHHHHHHh
Confidence 0111221 1224899999998665555555555554
No 247
>PLN02368 alanine transaminase
Probab=99.93 E-value=1e-23 Score=197.44 Aligned_cols=230 Identities=16% Similarity=0.137 Sum_probs=167.1
Q ss_pred HHHHHHHHHHHHh----C--CCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEE
Q psy8850 42 AIEKARNEVAQLI----Y--ADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTY 115 (397)
Q Consensus 42 ~~~~~~~~la~~~----~--~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~ 115 (397)
...++|+++++++ | +++++|++|+|+++|+.+++.++.. ++||+|++++|+|+.+...+... |.+++.
T Consensus 108 G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~---~pGd~Vli~~P~Y~~y~~~~~~~---g~~~v~ 181 (407)
T PLN02368 108 GLPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIR---GEKDGVLVPVPQYPLYSATISLL---GGTLVP 181 (407)
T ss_pred CCHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcC---CCCCEEEEeCCCCccHHHHHHHc---CCEEEE
Confidence 4455666666665 6 4677999999999999999988762 48999999999999999888877 899999
Q ss_pred eccCC--CCCCCHHHHHHHhcC------CceEEEEecccCccccccc---HHHHHHHHHhcCcEEEEecccccCcc----
Q psy8850 116 LKPKN--NGLITLSQLEEKICS------DTILVSVMLVNNEIGVIQP---ILEIGELCRSKGVIFHCDAAQAVGKI---- 180 (397)
Q Consensus 116 v~~~~--~~~~d~~~l~~~i~~------~~~~v~~~~~~~~tG~~~~---l~~i~~l~~~~gi~livD~a~~~~~~---- 180 (397)
++++. ++.+|++++++++++ +++++++++|+||||.+++ +++|+++|++||++||+|++|.....
T Consensus 182 v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y~~~~ 261 (407)
T PLN02368 182 YYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVYQQNIYQDER 261 (407)
T ss_pred EecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCC
Confidence 99874 367999999999874 6899999999999999999 46788889999999999999873211
Q ss_pred c-cccC-----------cccccEEEecccccc-CCCC--ceEEEE---ecCCCCccccccccCCccccccCCCCchhHHH
Q psy8850 181 D-INIQ-----------NYKVDLMSFSAHKIY-GPKG--IGALYI---RRNPRTRIEAQIHGGGHEYGLRSGTLATHQIV 242 (397)
Q Consensus 181 ~-~~~~-----------~~~~d~~~~s~~K~~-g~~g--~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (397)
+ ..+. .....+++.|++|.+ |.+| +|++++ +++....+.... . ... ..+.....
T Consensus 262 ~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~~~~-~------~~~-~~~~~~Q~ 333 (407)
T PLN02368 262 PFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIYKVA-S------IAL-SPNVSGQI 333 (407)
T ss_pred CcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHHHHh-c------ccC-CCCcHHHH
Confidence 1 1110 112457889999954 5555 788875 443433333321 0 111 23444444
Q ss_pred HHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCC
Q psy8850 243 GMGEAFRL----------ARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDM 286 (397)
Q Consensus 243 ~l~~al~~----------~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 286 (397)
++.++++. ..++..++.+.++++++.+.+.|.+ ++++.+..++
T Consensus 334 aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~-~~g~~~~~P~ 386 (407)
T PLN02368 334 FMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNS-CKNVVCNFTE 386 (407)
T ss_pred HHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCeEeCCCC
Confidence 45556642 1223456788999999999999999 8888776543
No 248
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.93 E-value=7.5e-23 Score=174.62 Aligned_cols=342 Identities=16% Similarity=0.168 Sum_probs=249.5
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhccCCCCCCCcch-hhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhH
Q psy8850 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIY-GWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAA 79 (397)
Q Consensus 1 ~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~ 79 (397)
||.+|.+..|..+.+..++.....++...-..+.- ......+-..+-.+++-+.|+.+.+++++++.+--+..++.+..
T Consensus 35 LdgnSLGa~p~~~~a~~~q~a~deW~~~lirsw~~a~~~W~~lp~~lgdklApLiGA~~~Evvv~dtts~nl~k~L~aal 114 (407)
T COG3844 35 LDGNSLGARPRAVTARLQQVATDEWGEGLIRSWNKAKADWFDLPERLGDKLAPLIGARAGEVVVTDTTSINLFKVLAAAL 114 (407)
T ss_pred eeccccccCchHHHHHHHHHHHHHHHhhhhhhhcccCCchhhchhHHHHHhhhhhcCCCCceEEeCCcchHHHHHHHHHh
Confidence 45667776664444444444333232221101211 22233456668999999999998999999999887777776665
Q ss_pred hhhccCCCEEEEcCC-CChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHH
Q psy8850 80 HFYKKRGKHIITVQT-EHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEI 158 (397)
Q Consensus 80 ~~~~~~g~~vl~~~~-~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i 158 (397)
+. .+|+.||+++. .+++-...++-+. ++..+..+-.+.+.+.++++++++++.+|+++++++-||...++..|
T Consensus 115 r~--~~~r~vIv~E~~~fpTdly~a~g~~----~~~~~~~~~~~~~~P~~~~~~~~dd~AvV~L~~V~y~TGql~dm~ai 188 (407)
T COG3844 115 RP--QEGRRVIVSEGDNFPTDLYIAEGLA----DLLGIGYDLEGVIAPRALEEAITDDVAVVLLSHVNYKTGQLLDMRAI 188 (407)
T ss_pred cc--CCCceEEeecCCCCCcchhhhcchh----hhhcccccceeeeChHHHHHhhccceEEEEeccccccccceeeHHHH
Confidence 43 34677777665 4455554444332 22222344456678889999999999999999999999999999999
Q ss_pred HHHHHhcCcEEEEecccccCccccccCcccccEEEecccc-c-cCCCCceEEEEecCCCCccccccccCCc---------
Q psy8850 159 GELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHK-I-YGPKGIGALYIRRNPRTRIEAQIHGGGH--------- 227 (397)
Q Consensus 159 ~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~~s~~K-~-~g~~g~g~~~~~~~~~~~~~~~~~~~~~--------- 227 (397)
-+++|++|+++++|-+|+.|.++.++...++|+-+++.+| + .||.+.+++++.++..+...+...||..
T Consensus 189 T~~AH~~galv~wDLAHsaGavp~~Lh~~gaDfaigcsyKYLNgGPGapa~l~v~~~h~e~~~~~lsgW~gha~pf~m~~ 268 (407)
T COG3844 189 TALAHQHGALVGWDLAHSAGAVPVDLHAAGADFAIGCSYKYLNGGPGAPAGLFVAPRHRERSWPPLSGWWGHARPFAMEE 268 (407)
T ss_pred HHHHHhcCceEEeehhcccCCcceeecccCCCeeeeeeceeccCCCCCceeEEeccccccccccccccccCCCCcchhhh
Confidence 9999999999999999999999999999999999999999 4 5566689999988877766655555421
Q ss_pred -------cccccCCCCchhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhhcC--cEEEeCCCCC-CCCceEEE
Q psy8850 228 -------EYGLRSGTLATHQIVGMGEAFRLARI-EMKEELKRILFLQKRLYNGLMESIE--EIYINGDMNN-RIPHNLNI 296 (397)
Q Consensus 228 -------~~~~~~~~~~~~~~~~l~~al~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~~~~~~-~~~~~~~~ 296 (397)
..+|..|+++.....++..+|+...+ .+.+++++-..+.+++.+.++..-+ ++.+..+... ..+.-+.+
T Consensus 269 ~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~ 348 (407)
T COG3844 269 VYAPGPGARRFLCGTQPVLSLAALEGALDIFADVDITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSL 348 (407)
T ss_pred ccCcCccccceeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchhhhccceeeE
Confidence 24677889999999999999998765 5899999999999999998887334 5667766432 33444444
Q ss_pred EecCCChHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeC-CCCCHHHHHHHHHHHHHHHHHH
Q psy8850 297 SFNFIEGESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIG-RFTTEKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 297 ~~~~~~~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~-~~~~~~~i~~~~~~l~~~~~~~ 373 (397)
..+ ...++.+.|. ||..- ...++.+|+.++ .|++-+||=.+++.|.++++..
T Consensus 349 ~hp--~~~~V~qaLi~rGVigD-----------------------~R~P~vlRfgftPlY~~~~DVw~AV~~L~evL~t~ 403 (407)
T COG3844 349 YHP--HGYQVMQALIDRGVIGD-----------------------FREPDVLRFGFTPLYVSFVDVWDAVDALEEVLDTL 403 (407)
T ss_pred ecC--cHHHHHHHHHHcCcccc-----------------------ccCCCeeeecCccceechhHHHHHHHHHHHHHHhh
Confidence 444 5677877775 54332 123489999987 5689999999999999998764
No 249
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.92 E-value=1.3e-22 Score=176.54 Aligned_cols=316 Identities=17% Similarity=0.155 Sum_probs=213.1
Q ss_pred CcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHH-hhCC
Q psy8850 32 NHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKL-ENDG 110 (397)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~-~~~g 110 (397)
.+.+.+...+....++++|+.+=|-- .-+.+.||+.|+..++..+. ++||+|+.+..-|.++...+... .+.|
T Consensus 53 G~iYsRi~NPT~~vlE~RiAaLEGG~--aa~a~aSG~AA~~~ai~~la----~aGD~iVss~~LYGGT~~lf~~tl~~~G 126 (426)
T COG2873 53 GNIYTRIMNPTTDVLEERIAALEGGV--AALAVASGQAAITYAILNLA----GAGDNIVSSSKLYGGTYNLFSHTLKRLG 126 (426)
T ss_pred CceeeeccCchHHHHHHHHHHhhcch--hhhhhccchHHHHHHHHHhc----cCCCeeEeeccccCchHHHHHHHHHhcC
Confidence 34445566677888999999887643 35667889999999999998 89999999999999999998876 5669
Q ss_pred cEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCccccccCccccc
Q psy8850 111 FRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVD 190 (397)
Q Consensus 111 ~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d 190 (397)
+++++++.+ |++.++++|+++||+|+++...||.+.+.|++.|+++||++|+++|||.+.+.+.+ +...+.++|
T Consensus 127 i~v~fvd~~-----d~~~~~~aI~~nTkavf~EtigNP~~~v~Die~ia~iAh~~gvpliVDNT~atpyl-~rP~~hGAD 200 (426)
T COG2873 127 IEVRFVDPD-----DPENFEAAIDENTKAVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIVDNTFATPYL-CRPIEHGAD 200 (426)
T ss_pred cEEEEeCCC-----CHHHHHHHhCcccceEEEEeccCCCccccCHHHHHHHHHHcCCcEEEecCCCccee-cchhhcCCC
Confidence 999999876 79999999999999999999999999999999999999999999999999886633 223344899
Q ss_pred EEEeccccccCCCC--ceEEEEecCCCC-----ccc------cccccCCccccc----------------cCCCCchhHH
Q psy8850 191 LMSFSAHKIYGPKG--IGALYIRRNPRT-----RIE------AQIHGGGHEYGL----------------RSGTLATHQI 241 (397)
Q Consensus 191 ~~~~s~~K~~g~~g--~g~~~~~~~~~~-----~~~------~~~~~~~~~~~~----------------~~~~~~~~~~ 241 (397)
+++.|.+|+.|+.| +|-+++...... +++ +.++|-.....| ...+.+....
T Consensus 201 IVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~~~~~g~~af~~~~r~~~lRDlGa~lsPfnA 280 (426)
T COG2873 201 IVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVYTETFGNAAFIIKARVQLLRDLGATLSPFNA 280 (426)
T ss_pred EEEEeecccccCCccccceEEEeCCccccccCCCCcccCCCCccccceehhhhcccHHHHHHHHHHHHHhcccccCcHHH
Confidence 99999999766555 455555422111 111 111111000000 0011111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCC---------------CCCCceEEEEecCCC--hH
Q psy8850 242 VGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMN---------------NRIPHNLNISFNFIE--GE 304 (397)
Q Consensus 242 ~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~--~~ 304 (397)
+.+...+| .+.-++++..+++..+.+.|++ .|.+.++.-++ ...+.++.|.+++.. ..
T Consensus 281 fl~lqGlE----TL~LRmerH~~NA~~vA~~L~~-HpkV~~V~YpgL~~~~~h~la~kyl~~g~g~vltF~~kgg~ea~~ 355 (426)
T COG2873 281 FLLLQGLE----TLSLRMERHCENALKVAEFLEN-HPKVAWVNYPGLASHPYHALAKKYLPKGAGAVLTFGVKGGYEAGK 355 (426)
T ss_pred HHHHhchh----hhHHHHHHHHHhHHHHHHHHhc-CCCeeeeecCCCCCCcchhHHHhhccCCCceEEEEEecChHHHHH
Confidence 11111222 2445678889999999999998 78776664321 133456777776531 24
Q ss_pred HHHHHhC------CcEecccCccCCCCCCh----hhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHH
Q psy8850 305 SLLMAIK------DIAVSSGSACTSASLEP----SYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKK 372 (397)
Q Consensus 305 ~~~~~l~------~i~~~~g~~~~~~~~~~----~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 372 (397)
++.+.|+ +|-=......-|.+..+ ..-....|+.+ ..||+|++. |+++.++..|+++++.
T Consensus 356 ~fi~~l~L~s~laNvGD~rsLvIHPAsTTH~ql~~ee~~~aGv~~----~~IRlSVGI----Ed~~DiiaDl~qAl~~ 425 (426)
T COG2873 356 KFIDALKLFSHLANIGDARSLVIHPASTTHRQLSEEEQAAAGVTP----DLIRLSVGI----EDIDDIIADLEQALEA 425 (426)
T ss_pred HHHHHHHHHHhhccccccceeEecCcccchhcCCHHHHHhcCCCC----CcEEEEecc----CCHHHHHHHHHHHHhc
Confidence 4444443 32222222222222222 23456666665 899999995 7888888888877653
No 250
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.92 E-value=3.9e-23 Score=193.22 Aligned_cols=313 Identities=18% Similarity=0.150 Sum_probs=213.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccC
Q psy8850 40 EKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPK 119 (397)
Q Consensus 40 ~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~ 119 (397)
.....++++.++++++.+ ++++|+||++|+.+++.+++ ++||+| ++++.|.++...+... |.+++.++++
T Consensus 52 ~~g~~~Leeaia~~~g~~--~vv~t~~Gt~Al~la~~al~----~pGD~V-~~~~~f~~~~~~i~~~---Ga~pv~v~i~ 121 (431)
T cd00617 52 SKSFYDLEDAVQDLFGFK--HIIPTHQGRGAENILFSILL----KPGRTV-PSNMHFDTTRGHIEAN---GAVPVDLVID 121 (431)
T ss_pred CCCHHHHHHHHHHHHCCC--eEEEcCCHHHHHHHHHHHhC----CCCCEE-ccCCcccchHHHHHhC---CCEeEEEecc
Confidence 335789999999999986 79999999999999999887 899987 5888888888877777 9999999886
Q ss_pred C----------CCCCCHHHHHHHhcCC----ceEEEEecccCcc-cccccH---HHHHHHHHhcCcEEEEecccccCc--
Q psy8850 120 N----------NGLITLSQLEEKICSD----TILVSVMLVNNEI-GVIQPI---LEIGELCRSKGVIFHCDAAQAVGK-- 179 (397)
Q Consensus 120 ~----------~~~~d~~~l~~~i~~~----~~~v~~~~~~~~t-G~~~~l---~~i~~l~~~~gi~livD~a~~~~~-- 179 (397)
. .|.+|+++|+++++++ +++|+++.++||+ |..+++ ++|.++|++||++||.|+++..+.
T Consensus 122 ~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~ 201 (431)
T cd00617 122 EAHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAY 201 (431)
T ss_pred cccccccccCCCCCcCHHHHHHHhCcccCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhh
Confidence 2 3559999999999865 7899999999998 888874 578999999999999999976431
Q ss_pred ---------cccccC------cccccEEEecccc-ccCCCCceEEEEecC-CCCccccccccCCccccccCCCCchhHHH
Q psy8850 180 ---------IDINIQ------NYKVDLMSFSAHK-IYGPKGIGALYIRRN-PRTRIEAQIHGGGHEYGLRSGTLATHQIV 242 (397)
Q Consensus 180 ---------~~~~~~------~~~~d~~~~s~~K-~~g~~g~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (397)
....+. ....|.+++|++| ..++.| |+++.+++ +..+++..... .......|..+...+.
T Consensus 202 ~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~~G-G~i~~~d~~l~~~~~~~~~~--~~~~~~~gG~~~r~~~ 278 (431)
T cd00617 202 FIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVNIG-GFLALRDDELYEEARQRVVL--YEGFVTYGGMAGRDME 278 (431)
T ss_pred hhhcccccccCCCHHHHHHHhhccCCEEEEEeecCCCCccc-eEEEeCcHHHHHHHHHhccc--cCCccccccccHHHHH
Confidence 111111 1147899999999 666664 88888864 55554432110 1111234555666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecC---------CChHHHHHHhC--
Q psy8850 243 GMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF---------IEGESLLMAIK-- 311 (397)
Q Consensus 243 ~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~l~-- 311 (397)
++..+++...+ ....++..+++++|.+.|.+ .|+.+..+.+ .+.+.+..+. .++.++...|.
T Consensus 279 A~A~gL~e~~~--~~~l~~~~~~r~~l~~~L~~--~G~~v~~P~G---gh~v~~d~~~~~~~~~~~~~~~~~la~~L~~e 351 (431)
T cd00617 279 ALAQGLREAVE--EDYLRHRVEQVRYLGDRLDE--AGVPIVEPAG---GHAVFIDAREFLPHIPQEQFPAQALAAELYLE 351 (431)
T ss_pred HHHHHHHhccc--HHHHHHHHHHHHHHHHHHHH--CCCCccCCCc---ceEEEEEhHHhcCCCCcccCcHHHHHHHHHHH
Confidence 66556654322 12333334456899999998 4777776544 4555555442 13566665554
Q ss_pred -CcEec-ccCccCCCCCChhhHHHhhCCCccccCceEEEeeCC-CCCHHHHHHHHHHHHHHHHHHHhcCccc
Q psy8850 312 -DIAVS-SGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGR-FTTEKEIDFTIKLLKMKVKKLRELSPLW 380 (397)
Q Consensus 312 -~i~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~-~~~~~~i~~~~~~l~~~~~~~~~~~~~~ 380 (397)
||... .|....+...+.... ....-..+|+.++- .-|.+++|.++++|..+.++-.... ++
T Consensus 352 ~gV~~~~~g~~~~~~~~~~~~~-------~~~~~~~~rl~~prr~~t~~~~~~~~~~~~~~~~~~~~~~-~~ 415 (431)
T cd00617 352 AGVRAVELGIFSAGRDPNTGEN-------KYPELELVRLAIPRRVYTQDHMDYVAAAVIALYERREDIR-GL 415 (431)
T ss_pred cCeeEEeecceecccCCCCCcc-------cCCccceeEEeccccccCHHHHHHHHHHHHHHHhhHhhCC-Ce
Confidence 67643 344322210000000 00012789999873 4689999999999999888754433 54
No 251
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.92 E-value=6.9e-23 Score=186.18 Aligned_cols=311 Identities=16% Similarity=0.155 Sum_probs=220.9
Q ss_pred CcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHH-hhCC
Q psy8850 32 NHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKL-ENDG 110 (397)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~-~~~g 110 (397)
.+.+++...+....+++.++++-|.+ ..+.++||..|+..++.++. ++||+|++++..|+++...+... .+.|
T Consensus 54 ~~~Y~R~~nPT~~~lE~~~a~LEg~~--~~~afsSGmaAI~~~~l~ll----~~GD~vl~~~~~YG~t~~~~~~~l~~~g 127 (396)
T COG0626 54 GYDYSRTGNPTRDALEEALAELEGGE--DAFAFSSGMAAISTALLALL----KAGDHVLLPDDLYGGTYRLFEKILQKFG 127 (396)
T ss_pred CcccccCCCccHHHHHHHHHHhhCCC--cEEEecCcHHHHHHHHHHhc----CCCCEEEecCCccchHHHHHHHHHHhcC
Confidence 45555666678889999999998876 68888899999999999888 78999999999999999988876 4559
Q ss_pred cEEEEeccCCCCCCCHHHHHHHhc-CCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCccccccCcccc
Q psy8850 111 FRVTYLKPKNNGLITLSQLEEKIC-SDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKV 189 (397)
Q Consensus 111 ~~v~~v~~~~~~~~d~~~l~~~i~-~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~ 189 (397)
+++++++.. +.+++++++. ++|++|+++.|+||+..+.|+++|+++||++|+.+++|++.+.+... +...+++
T Consensus 128 i~~~~~d~~-----~~~~~~~~~~~~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNTfatP~~q-~PL~~Ga 201 (396)
T COG0626 128 VEVTFVDPG-----DDEALEAAIKEPNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNTFATPVLQ-RPLELGA 201 (396)
T ss_pred eEEEEECCC-----ChHHHHHHhcccCceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEEECCccccccc-ChhhcCC
Confidence 999888755 5667777777 59999999999999999999999999999999999999998876653 2234489
Q ss_pred cEEEeccccccCCCC---ceEEEEecCCCCccc-cccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8850 190 DLMSFSAHKIYGPKG---IGALYIRRNPRTRIE-AQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFL 265 (397)
Q Consensus 190 d~~~~s~~K~~g~~g---~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~ 265 (397)
|+++.|.+|..++.+ .|+++.+++...... ..... ...+.+.....+-+...++. +.-+.++..++
T Consensus 202 DIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~------~~G~~l~p~dA~l~lRGlkT----L~~Rm~~~~~n 271 (396)
T COG0626 202 DIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQRA------NTGAVLSPFDAWLLLRGLRT----LALRMERHNEN 271 (396)
T ss_pred CEEEEeccccccCCcceeeeEEecChHHHHHHHHHHHHh------hcCCCCCHHHHHHHHhccch----HHHHHHHHHHH
Confidence 999999999554433 465555544322221 11100 01122332333333233332 44567777888
Q ss_pred HHHHHHHHhhhcCcEEEeCCCC--------------CCCCceEEEEecC-CChHHHHHHhC--CcEecccCccCCCC---
Q psy8850 266 QKRLYNGLMESIEEIYINGDMN--------------NRIPHNLNISFNF-IEGESLLMAIK--DIAVSSGSACTSAS--- 325 (397)
Q Consensus 266 ~~~l~~~l~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~-~~~~~~~~~l~--~i~~~~g~~~~~~~--- 325 (397)
+..+.+.|++ .|.+.-+.-|+ ...++++.|.+.+ ....++.+.|+ .+..+.|...+...
T Consensus 272 A~~IA~~L~~-~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~~~~~~~f~~~L~l~~~a~SlGgveSLi~~pa 350 (396)
T COG0626 272 ALKIAEFLAD-HPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNEEAAKKFLDSLKLFKLAESLGGVESLISHPA 350 (396)
T ss_pred HHHHHHHHhc-CCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCChHHHHHHHHhCCccEEeccCCCccccccccc
Confidence 8888888888 77765432222 1257888888886 44566777776 55666666554422
Q ss_pred -CC----hhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHH
Q psy8850 326 -LE----PSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 326 -~~----~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 373 (397)
+. +.......|+.+ +.||+|++. |+++.+++.|+++++.+
T Consensus 351 ~~th~~~~~~~r~~~Gi~~----~LvRlSVGl----Ed~eDLi~Dl~~Al~~~ 395 (396)
T COG0626 351 TMTHASIPLEERAKAGITD----GLVRLSVGL----EDVEDLIADLEQALAKA 395 (396)
T ss_pred ccCcccCCHhHHHhcCCCC----CeEEEEecC----CCHHHHHHHHHHHHHhh
Confidence 21 223445677775 999999997 77888888888877654
No 252
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.92 E-value=1.1e-22 Score=169.29 Aligned_cols=336 Identities=15% Similarity=0.171 Sum_probs=234.8
Q ss_pred CCCHHHHHHHHHHHhhcc-CCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCC
Q psy8850 8 PIDPRVVDKMIPYLRVQF-GNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRG 86 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g 86 (397)
-.+++.++++-++.+.+. .+-.. .-.......+.+.++.+.+++++|.+ .+.+|+|+-+|=.+++.+++ ++|
T Consensus 28 iLt~eArkal~E~gDGYSvCD~C~-~Grldei~kPpI~~F~~dlaeFlg~D--~~R~t~GARe~KfavMhal~----~~g 100 (382)
T COG1103 28 ILTEEARKALLEWGDGYSVCDFCL-EGRLDEITKPPIKDFLEDLAEFLGMD--EVRVTAGAREAKFAVMHALC----KEG 100 (382)
T ss_pred cCCHHHHHHHHHhcCCcchhhhhc-cCccccccCCcHHHHHHHHHHHhCCc--eeeecccchhhHHHHHHHhc----cCC
Confidence 457888888888765422 11110 01111122345666667799999988 69999999999999999999 899
Q ss_pred CEEEEcCCCChhhHHHHHHHhhCCcEEEEeccC--CCCCCCHHHHHHHhcC-------CceEEEEecccCcccccccHHH
Q psy8850 87 KHIITVQTEHKSVLDSIRKLENDGFRVTYLKPK--NNGLITLSQLEEKICS-------DTILVSVMLVNNEIGVIQPILE 157 (397)
Q Consensus 87 ~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~i~~-------~~~~v~~~~~~~~tG~~~~l~~ 157 (397)
|-|++...+|.+++-+++.. |.++..||.. ++..++++...+.|++ .+.+.+++++...-|.+.|.+.
T Consensus 101 d~vV~D~~aHYttyvAAEra---gl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakk 177 (382)
T COG1103 101 DWVVVDSLAHYTTYVAAERA---GLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKK 177 (382)
T ss_pred CEEEEcCcchHHHHHHHHhc---CCeEEecCCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchhhHH
Confidence 99999999999999888877 9999999965 4677889888877742 3678899999999999999999
Q ss_pred HHHHHHhcCcEEEEecccccCccccccCcccccEEEecccc-ccCCCCceEEEEecCCCCccccccccCCc---cccccC
Q psy8850 158 IGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEAQIHGGGH---EYGLRS 233 (397)
Q Consensus 158 i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~~s~~K-~~g~~g~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 233 (397)
++++|++||+++++.++|..|.+|.+....++||+++|.|| +....++|++.++.++.+..-... +... .--...
T Consensus 178 va~ic~e~gvPlllN~AYt~Grmpvs~ke~g~DFiVgSGHKsmAAs~PiGvl~~~eE~ae~V~r~S-g~~~~~KEvellG 256 (382)
T COG1103 178 VAKICREYGVPLLLNCAYTVGRMPVSGKEIGADFIVGSGHKSMAASAPIGVLAMSEEWAEIVLRRS-GRAFPKKEVELLG 256 (382)
T ss_pred HHHHHHHcCCceEeecceeeccccccccccCCCEEEecCccchhccCCeeEEeehhHHHHHHHhhc-ccccccceeeeec
Confidence 99999999999999999999999999999999999999999 655555899999876554432211 0000 000112
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCChHHHHHHhC--
Q psy8850 234 GTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAIK-- 311 (397)
Q Consensus 234 ~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-- 311 (397)
++.--..+..+.+++-...+.+.++-+.+. .+.++.+.|++ +.|+.-.+..+.. ..++.|..+.. .++.+.-.
T Consensus 257 CT~rGapivTlmASfP~V~eRVkrWdeEv~-kaR~fv~elEk-igg~~qlG~rPk~-HdLm~Fetp~f--~eIakk~~r~ 331 (382)
T COG1103 257 CTVRGAPIVTLMASFPHVVERVKRWDEEVE-KARWFVAELEK-IGGVKQLGERPKN-HDLMKFETPVF--HEIAKKHKRK 331 (382)
T ss_pred ccccCchHHHHHhcCHHHHHHHHHHHHHHH-HHHHHHHHHHH-hhhHHHhCCCCcc-cceeeecCchH--HHHHHhCcCC
Confidence 333334566666777776665555555444 47788888988 8777666654322 34555554432 22222222
Q ss_pred CcEecccCccCCCCCChhhHHHhhCCCcccc--CceEEEeeCCCCCHHHHHHHHHHHHHHHHHH
Q psy8850 312 DIAVSSGSACTSASLEPSYVLRALGCNDELA--HSSIRFTIGRFTTEKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 312 ~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~--~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 373 (397)
+.++- .-|+..|+..-.. ..++.+|+.. .+.|+++..+++++++++++
T Consensus 332 gyFlY-------------~ELK~RgI~GI~~G~Tk~~K~svyG-l~~Eqve~V~~afkeI~eky 381 (382)
T COG1103 332 GYFLY-------------EELKKRGIHGIQPGQTKYFKLSVYG-LSWEQVEYVVDAFKEIAEKY 381 (382)
T ss_pred ceeeH-------------HHHHhcCccccccCceeEEEEEeec-CCHHHHHHHHHHHHHHHHhc
Confidence 22221 1122222221111 2578888875 68999999999999998865
No 253
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.92 E-value=1.8e-22 Score=188.67 Aligned_cols=332 Identities=17% Similarity=0.122 Sum_probs=213.6
Q ss_pred CHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEE
Q psy8850 10 DPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHI 89 (397)
Q Consensus 10 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~v 89 (397)
.++-++++.+.+..- ...+ ..+...++++.++++++.+ ++++++|+++|+.+++.++.. ++||+|
T Consensus 10 ~~~~~~~~~~~l~~~--------~~~g--~~~~~~~~e~~la~~~g~~--~~v~~~sgt~al~~~l~~~~~---~~Gd~V 74 (375)
T PRK11706 10 VGTELDYIQQAMSSG--------KLCG--DGGFTRRCQQWLEQRFGSA--KVLLTPSCTAALEMAALLLDI---QPGDEV 74 (375)
T ss_pred CHHHHHHHHHHHHcC--------CccC--CCHHHHHHHHHHHHHhCCC--eEEEECCHHHHHHHHHHHhCC---CCCCEE
Confidence 455577777777541 1111 1235678888999999885 799999999999988776522 789999
Q ss_pred EEcCCCChhhHHHHHHHhhCCcEEEEeccCCC-CCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcE
Q psy8850 90 ITVQTEHKSVLDSIRKLENDGFRVTYLKPKNN-GLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVI 168 (397)
Q Consensus 90 l~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~-~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~ 168 (397)
+++.++|+++..++... |.+++.++++++ +.+|++++++++++++++|++++ ++|...++++|.++|++||++
T Consensus 75 iv~~~t~~~~~~~~~~~---G~~~v~~d~d~~~~~~d~~~le~~i~~~tk~i~~~~---~~G~~~~~~~i~~la~~~~i~ 148 (375)
T PRK11706 75 IMPSYTFVSTANAFVLR---GAKIVFVDIRPDTMNIDETLIEAAITPKTRAIVPVH---YAGVACEMDTIMALAKKHNLF 148 (375)
T ss_pred EECCCCcHHHHHHHHHc---CCEEEEEecCCCcCCcCHHHHHHhcCCCCeEEEEeC---CCCCccCHHHHHHHHHHcCCE
Confidence 99999999998888776 999999999865 57899999999999999998764 589999999999999999999
Q ss_pred EEEecccccCccccccCcc--cccEEEeccc--cccCCCCceEEEEe-cCCCCccccccccCCcc-c---------c-cc
Q psy8850 169 FHCDAAQAVGKIDINIQNY--KVDLMSFSAH--KIYGPKGIGALYIR-RNPRTRIEAQIHGGGHE-Y---------G-LR 232 (397)
Q Consensus 169 livD~a~~~~~~~~~~~~~--~~d~~~~s~~--K~~g~~g~g~~~~~-~~~~~~~~~~~~~~~~~-~---------~-~~ 232 (397)
||+|++|+.+... +.... ..|+-++|+| |.+++...|.++.+ ++...++......|... . . ..
T Consensus 149 vIeD~a~a~g~~~-~~~~~g~~~~~~~~Sf~~~K~l~~g~gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 227 (375)
T PRK11706 149 VVEDAAQGVMSTY-KGRALGTIGHIGCFSFHETKNYTAGEGGALLINDPALIERAEIIREKGTNRSQFFRGQVDKYTWVD 227 (375)
T ss_pred EEEECcccccccc-CCeeeecCcCEEEEeCCCCccccccCCeEEEECCHHHHHHHHHHHHcCCCcchhhccCCCcceeee
Confidence 9999999977631 21111 2477888887 85544323555554 33443333322211000 0 0 01
Q ss_pred CCCCchhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhcCc---EEEeCCCCC--CCCceEEEEecC-CChHH
Q psy8850 233 SGTLATHQIVGMGEAFRLA-RIEMKEELKRILFLQKRLYNGLMESIEE---IYINGDMNN--RIPHNLNISFNF-IEGES 305 (397)
Q Consensus 233 ~~~~~~~~~~~l~~al~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~---~~~~~~~~~--~~~~~~~~~~~~-~~~~~ 305 (397)
.|...... .+.+++-.. .+.+++..++.+++.+++.+.|.+ +++ +.+...+.. ...+++.+.++. .+..+
T Consensus 228 ~g~~~~~~--~~~aa~~~~ql~~l~~~~~~R~~~~~~~~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 304 (375)
T PRK11706 228 IGSSYLPS--ELQAAYLWAQLEAADRINQRRLALWQRYYDALAP-LAEAGRIELPSIPDDCKHNAHMFYIKLRDLEDRSA 304 (375)
T ss_pred cccccCcC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCcCCeeecCCCCCCCceeeEEEEEEECCcCCHHH
Confidence 12211111 111122111 123566777777888888888877 652 332221111 123345555542 35678
Q ss_pred HHHHhC--CcEecccCccCCCCCChhhHHHhhCC-------CccccCceEEEeeCCCCCHHHHHHHHHHHHHHH
Q psy8850 306 LLMAIK--DIAVSSGSACTSASLEPSYVLRALGC-------NDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKV 370 (397)
Q Consensus 306 ~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~-------~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~ 370 (397)
+.+.|. ||..... +.|.... ..++..+. ........+.+.+....+++|++++++.|++++
T Consensus 305 l~~~L~~~gI~~~~~--~~p~~~~--~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~ 374 (375)
T PRK11706 305 LINFLKEAGIMAVFH--YIPLHSS--PAGERFGRFHGEDRYTTKESERLLRLPLFYNLTDVEQRTVIDTILEFF 374 (375)
T ss_pred HHHHHHHCCCCcccc--CCccCcc--hhhHhcCCCCCCChHHHHHHhCcEeccCCCCCCHHHHHHHHHHHHHHh
Confidence 888887 7766533 2232111 12222211 123345778888888889999999999999864
No 254
>KOG0256|consensus
Probab=99.92 E-value=3.2e-23 Score=182.00 Aligned_cols=294 Identities=17% Similarity=0.219 Sum_probs=208.9
Q ss_pred HHHHHHHHHHHHhC--------CCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHHhhCCcEE
Q psy8850 42 AIEKARNEVAQLIY--------ADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRV 113 (397)
Q Consensus 42 ~~~~~~~~la~~~~--------~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v 113 (397)
++..+++++++++. .+|+++++++|+|.|+++++..|. .||+..+++.|.|+++...... +.|.++
T Consensus 122 Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLa----dpgdafLvPtPyY~gfdrdl~~--rTgvei 195 (471)
T KOG0256|consen 122 GLPSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLA----DPGDAFLVPTPYYPGFDRDLRW--RTGVEI 195 (471)
T ss_pred CchHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhc----CCCceeeecCCCCCccccccee--ccCceE
Confidence 56677788877764 578899999999999999999888 8999999999999999766543 238999
Q ss_pred EEeccCC--CCCCCHHHHHHHhcC------CceEEEEecccCccccccc---HHHHHHHHHhcCcEEEEecccccCcccc
Q psy8850 114 TYLKPKN--NGLITLSQLEEKICS------DTILVSVMLVNNEIGVIQP---ILEIGELCRSKGVIFHCDAAQAVGKIDI 182 (397)
Q Consensus 114 ~~v~~~~--~~~~d~~~l~~~i~~------~~~~v~~~~~~~~tG~~~~---l~~i~~l~~~~gi~livD~a~~~~~~~~ 182 (397)
+.|.+.+ ++.++.+++|+++.+ +.+.+++++|+||.|.+.+ +..+..+|.+++|.||+|++|+.....-
T Consensus 196 vpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~ 275 (471)
T KOG0256|consen 196 VPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSVFDK 275 (471)
T ss_pred EEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcccccCc
Confidence 9998873 568999999998853 5789999999999999998 4567778899999999999998433210
Q ss_pred -----------ccC-cccccEEEeccccccCCCC--ceEEEEecCCCCccccccccCCccccccCCCCchh---HHHHHH
Q psy8850 183 -----------NIQ-NYKVDLMSFSAHKIYGPKG--IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATH---QIVGMG 245 (397)
Q Consensus 183 -----------~~~-~~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~ 245 (397)
+.. ..+..-+++|.+|-+|.+| .|+++..++........+.. .+..+.. .++.+.
T Consensus 276 ~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~VvsaA~kmss--------f~~vSs~tQ~~la~LL 347 (471)
T KOG0256|consen 276 SEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAATKMSS--------FGLVSSQTQYLLASLL 347 (471)
T ss_pred cCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecChHHHHHHHHHhh--------ccCCcHHHHHHHHHHh
Confidence 111 2234467899999777667 67777765433222222211 1112222 222232
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecC-CC------hHHHHHHhC---CcEe
Q psy8850 246 EAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF-IE------GESLLMAIK---DIAV 315 (397)
Q Consensus 246 ~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~~~~~~~l~---~i~~ 315 (397)
.--++....+++..++++...+++.++|++ .|+.+..... +.+.++.+.. .+ ..++.+.+. ++.+
T Consensus 348 SD~~f~~~yl~en~~Rl~~rh~~~~~gLk~--lgI~cl~s~A---GlF~wvDlr~lL~s~tfe~El~Lw~~i~~~vklnl 422 (471)
T KOG0256|consen 348 SDEEFTREYLRENNKRLRIRHRYIVEGLKA--LGIPCLKSNA---GLFCWVDLRKLLTSLTFEGELELWERILDNVKLNL 422 (471)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhHHh--cCCceeecCC---eeEEEEEhHHhcCcCChHHHHHHHHHHHHhhcccc
Confidence 222333446888899999999999999999 6888776543 4555666642 11 123334433 7888
Q ss_pred cccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHH
Q psy8850 316 SSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKK 372 (397)
Q Consensus 316 ~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 372 (397)
+||..|.=. -++|+|+|+.. +.++.++-++++|+..+..
T Consensus 423 SpG~s~~C~-----------------EpGWFRvcFAn-~~~~t~~~am~Ri~~~~~~ 461 (471)
T KOG0256|consen 423 SPGSSCHCH-----------------EPGWFRVCFAN-MSEETLEVAMRRLKQFLDS 461 (471)
T ss_pred CCCCcceec-----------------CCCeEEEEecc-CCHHHHHHHHHHHHHHHHh
Confidence 999766321 13999999997 5677777799999998873
No 255
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.92 E-value=1.8e-22 Score=189.75 Aligned_cols=314 Identities=16% Similarity=0.140 Sum_probs=207.3
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhcc--
Q psy8850 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKK-- 84 (397)
Q Consensus 7 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~-- 84 (397)
++.++.+.+++.+++.... ...+ . ...+...++++.++++++.+ ++++++||++|+..++..+.....+
T Consensus 42 G~~~p~v~~a~~~~~~~~~-~~~~-~-----~~~~~~~~l~~~la~~~g~~--~~~~~~sg~~a~~~a~~~~~~~~~~~~ 112 (379)
T TIGR00707 42 GHAHPKLVEALKEQLEKLV-HVSN-L-----YYTEPQEELAEKLVEHSGAD--RVFFCNSGAEANEAALKLARKYTGDKG 112 (379)
T ss_pred CCCCHHHHHHHHHHHhhcc-cccc-c-----cCCHHHHHHHHHHHhhCCCC--EEEEeCCcHHHHHHHHHHHHHHhhccC
Confidence 3556899999999887632 1111 1 12356788999999999876 8999999999999999865322111
Q ss_pred -CCCEEEEcCCCChhhHHHHHHHhhCCcEE----EEeccCCCCC----CCHHHHHHHhcCCceEEEEecccCcccccc-c
Q psy8850 85 -RGKHIITVQTEHKSVLDSIRKLENDGFRV----TYLKPKNNGL----ITLSQLEEKICSDTILVSVMLVNNEIGVIQ-P 154 (397)
Q Consensus 85 -~g~~vl~~~~~~~s~~~~~~~~~~~g~~v----~~v~~~~~~~----~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~-~ 154 (397)
++++|++.+++|+.+....... +... ...+...+.. .|++++++.+++++++|+++++++++|... +
T Consensus 113 ~~~~~vi~~~~~yh~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~p~~~~~g~~~~~ 189 (379)
T TIGR00707 113 KEKKKIIAFENSFHGRTMGALSA---TGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDDETAAVIVEPIQGEGGVNPAS 189 (379)
T ss_pred CCCCeEEEECCCcCCccHHHHHh---cCChhhhccCCCCCCCceeeCCCCHHHHHHHhhhCeeEEEEEccccCCCCccCC
Confidence 3689999999887766554443 2111 1122221111 289999999988999999988877788653 3
Q ss_pred ---HHHHHHHHHhcCcEEEEecccc-cCcc----ccccCcccccEEEeccccccC-CCCceEEEEecCCCCccccccccC
Q psy8850 155 ---ILEIGELCRSKGVIFHCDAAQA-VGKI----DINIQNYKVDLMSFSAHKIYG-PKGIGALYIRRNPRTRIEAQIHGG 225 (397)
Q Consensus 155 ---l~~i~~l~~~~gi~livD~a~~-~~~~----~~~~~~~~~d~~~~s~~K~~g-~~g~g~~~~~~~~~~~~~~~~~~~ 225 (397)
+++|.++|++||+++|+|++|+ ++.. +.+......|+++ ++|.++ +.++|+++++++....+.....+
T Consensus 190 ~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~~~~~~~~~~~d~~t--~sK~~~~G~riG~~~~~~~~~~~~~~~~~~- 266 (379)
T TIGR00707 190 AEFLKALREICKDKDALLIFDEVQTGIGRTGKFFAYEHYGIEPDIIT--LAKGLGGGVPIGATLAKEEVAEAFTPGDHG- 266 (379)
T ss_pred HHHHHHHHHHHHHcCCEEEEeccccCCCccchhhhHHhcCCCCCEEE--EcccccCCcccEEEEEcHHHHhhhcCCCCC-
Confidence 7899999999999999999987 3221 1112223456664 569444 33589999987665555432211
Q ss_pred CccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCChHH
Q psy8850 226 GHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGES 305 (397)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (397)
... +.+...+.+..++++.+.. .++.+++.++++++++.|++......+ ......+.++.+.++. +..+
T Consensus 267 -----~~~-~~~~~~~~aa~aaL~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~g~~~~~~~~~-~~~~ 335 (379)
T TIGR00707 267 -----STF-GGNPLACAAALAVLEVIEK--ERLLENVKEKGDYFKERLEELGKNYPN--KEVRGKGLMLGIELEA-PCKD 335 (379)
T ss_pred -----CCC-CCCHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHHHHHHhhCCC--CccccCceEEEEEecC-cHHH
Confidence 111 2355566666678876643 356677788888888887762111111 1111124456666653 3567
Q ss_pred HHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHH
Q psy8850 306 LLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (397)
Q Consensus 306 ~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 369 (397)
+.+.|. ||.+.++. .+++|++++...+++++++++++|+++
T Consensus 336 ~~~~l~~~Gv~v~~~~-----------------------~~~lRi~~~~~~t~~~i~~~~~~l~~~ 378 (379)
T TIGR00707 336 IVKKALEKGLLVNCAG-----------------------PKVLRFLPPLIITKEEIDEAVSALEEA 378 (379)
T ss_pred HHHHHHHCCcEEeeCC-----------------------CCEEEEECCCcCCHHHHHHHHHHHHHh
Confidence 777775 88887631 278999998878999999999999875
No 256
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.92 E-value=2.3e-23 Score=182.31 Aligned_cols=312 Identities=17% Similarity=0.218 Sum_probs=210.7
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCC
Q psy8850 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRG 86 (397)
Q Consensus 7 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g 86 (397)
+-+.|+++++|.+.-.. ....|...+....+++.++++++. +.++|++|||+|+.+++.+.+ +|+
T Consensus 10 ~g~~~~m~eam~~a~~~---------~~~~YG~D~~~~~~e~~~ae~~g~--~a~~Fv~sGT~aN~lal~~~~----~~~ 74 (342)
T COG2008 10 AGPTPEMREALAAANAV---------GDDVYGEDPTTNALEQRIAELFGK--EAALFVPSGTQANQLALAAHC----QPG 74 (342)
T ss_pred CCCCHHHHHHHHhcccc---------CCCCCCCCHHHHHHHHHHHHHhCC--ceEEEecCccHHHHHHHHHhc----CCC
Confidence 35678899998876531 112344566889999999999998 589999999999999999998 899
Q ss_pred CEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcC------CceEEEEecccCcccccccH---HH
Q psy8850 87 KHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS------DTILVSVMLVNNEIGVIQPI---LE 157 (397)
Q Consensus 87 ~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~------~~~~v~~~~~~~~tG~~~~l---~~ 157 (397)
..|++....|-.....-..-.-.+.....+....+|.++++++++.+.. .+.+++..+.+|..|+++|+ ++
T Consensus 75 ~~vi~~~~aHi~~~E~Ga~~~~~~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~ 154 (342)
T COG2008 75 ESVICHETAHIYTDECGAPEFFGGGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEA 154 (342)
T ss_pred CeEEEeccccceecccCcHHHHcCCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHH
Confidence 9999999988777665433222234444444457899999999998863 24566677777788999995 56
Q ss_pred HHHHHHhcCcEEEEeccccc---CccccccCcc--cccEEEeccccccCCCCceEEEEecCCCCcccc--ccccCCcccc
Q psy8850 158 IGELCRSKGVIFHCDAAQAV---GKIDINIQNY--KVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEA--QIHGGGHEYG 230 (397)
Q Consensus 158 i~~l~~~~gi~livD~a~~~---~~~~~~~~~~--~~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~~~--~~~~~~~~~~ 230 (397)
|.++||++|++|++|++--+ -....+...+ ++|+++++++|.++.++.++++.+.+..+++.. ...|+
T Consensus 155 i~~~~k~~~l~LHmDGAR~~nA~valg~~~~~~~~~~D~v~~~~tK~g~~~~gAiv~gn~~~~~~a~~~rK~~Gg----- 229 (342)
T COG2008 155 ISAVCKEHGLPLHMDGARLANALVALGVALKTIKSYVDSVSFCLTKGGGAPVGAIVFGNRDFAKRARRWRKRAGG----- 229 (342)
T ss_pred HHHHHHHhCCceeechHHHHHHHHHcCCCHHHHHhhCCEEEEecccCCcceeeeEEEcCHHHHHHHHHHHHHhcc-----
Confidence 78889999999999988421 1111222222 799999999995554445888888776665432 22221
Q ss_pred ccCCCCchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCChHHHHHH
Q psy8850 231 LRSGTLATHQIVGMGEAFRLARIE-MKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMA 309 (397)
Q Consensus 231 ~~~~~~~~~~~~~l~~al~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (397)
...-..+++. +.+-.+.+. ......+-.+++.+|.+.+.+ .+|+.+..++. .+++.+.++. ..+ ..
T Consensus 230 ----l~~k~r~laA-~~~~~l~~~~~~~~~~Han~mA~~La~~~~~-~~G~~~~~~~~---tN~vf~~l~~---~~i-~~ 296 (342)
T COG2008 230 ----LMRKARFLAA-QGLYALEDDVWRLAADHANAMAARLAEGLEA-KPGVKLAFPVE---TNMVFVRLPE---SAI-EA 296 (342)
T ss_pred ----cHhhhhHHHH-HHHHHHhccHHHHHHHHHHHHHHHHHHhhhh-cCCceeccCCc---ccEEEEECCh---HHH-HH
Confidence 2222333333 233333333 344456666779999999997 68998887633 4555555553 222 22
Q ss_pred hC--CcEecccCccCCCCCChhhHHHhhCCCccccC-ceEEEeeCCCCCHHHHHHHHHHHHHHH
Q psy8850 310 IK--DIAVSSGSACTSASLEPSYVLRALGCNDELAH-SSIRFTIGRFTTEKEIDFTIKLLKMKV 370 (397)
Q Consensus 310 l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~-~~iRi~~~~~~~~~~i~~~~~~l~~~~ 370 (397)
+. +.....|..... + ..+|+..+..+++++||++++.+++++
T Consensus 297 l~~~~~~~~~~~~~~~-------------------~~~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 297 LRLAGALFYRGVLIGA-------------------HGEIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred HHhhchhheeeeeccC-------------------CCceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 22 332222211111 1 368999999999999999999998764
No 257
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.92 E-value=2.4e-22 Score=189.43 Aligned_cols=312 Identities=17% Similarity=0.205 Sum_probs=204.5
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhc---
Q psy8850 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYK--- 83 (397)
Q Consensus 7 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~--- 83 (397)
+..+|.|.+++.+++..... ..+ . ...+...++.+.|+++.+. +.+++++||++|++.+++.+..+..
T Consensus 55 Gh~~p~v~~ai~~~~~~~~~-~~~---~---~~~~~~~~l~~~l~~~~~~--~~~~~~~SGseA~e~Alk~a~~~~~~~~ 125 (396)
T PRK04073 55 GHRHPKIIQALKDQADKVTL-TSR---A---FHSDQLGPWYEKVAKLTGK--DMVLPMNTGAEAVETAIKAARRWAYDVK 125 (396)
T ss_pred CCCCHHHHHHHHHHHhhccc-ccc---c---cCCHHHHHHHHHHHhcCCC--CeEEEcCChHHHHHHHHHHHHHHhhhcc
Confidence 45789999999999876321 111 0 1123456788888888764 4899999999999999997653211
Q ss_pred ---cCCCEEEEcCCCChhh-HHHHHHHhhCCc---------EEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCccc
Q psy8850 84 ---KRGKHIITVQTEHKSV-LDSIRKLENDGF---------RVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIG 150 (397)
Q Consensus 84 ---~~g~~vl~~~~~~~s~-~~~~~~~~~~g~---------~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG 150 (397)
..+++|+....+|++. ..++......+. .+..+|.+ |++++++++.+++++|++++++||+|
T Consensus 126 g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~i~~~~~~viiep~~~~~G 200 (396)
T PRK04073 126 GVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPYG-----DLEALKAAITPNTAAFLVEPIQGEAG 200 (396)
T ss_pred CCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCCC-----CHHHHHHhcccCeEEEEEcCccCCCC
Confidence 1236677766655554 344333211010 12233332 78999999988999999999999999
Q ss_pred cccc----HHHHHHHHHhcCcEEEEecccc-cCcc----ccccCcccccEEEeccccccCC--CCceEEEEecCCCCccc
Q psy8850 151 VIQP----ILEIGELCRSKGVIFHCDAAQA-VGKI----DINIQNYKVDLMSFSAHKIYGP--KGIGALYIRRNPRTRIE 219 (397)
Q Consensus 151 ~~~~----l~~i~~l~~~~gi~livD~a~~-~~~~----~~~~~~~~~d~~~~s~~K~~g~--~g~g~~~~~~~~~~~~~ 219 (397)
.+.| +++|.++|++||+++|+|++|+ +|.. ..+.....+|++++| |.+|. ..+|+++++++..+.+.
T Consensus 201 ~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~pdi~~~s--K~lg~gg~~ig~~~~~~~i~~~~~ 278 (396)
T PRK04073 201 INIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFACDWDNVTPDMYILG--KALGGGVFPISCVAANRDILGVFT 278 (396)
T ss_pred CccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHHHhhhcCCCCCEEEec--ccccCCCCcceEEEEcHHHHhhhc
Confidence 9887 7899999999999999999998 3321 123333457888765 94333 34799999876655543
Q ss_pred cccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEec
Q psy8850 220 AQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN 299 (397)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (397)
.... ....+. +....++..++|+.+.+ ..+.++..++++++.+.|++ +.. ....... ..+.++.+.++
T Consensus 279 ~~~~------~~t~~~-~~~~~aaa~aaL~~~~~--~~l~~~~~~~~~~l~~~L~~-l~~-~~i~~~~-~~g~~~~~~~~ 346 (396)
T PRK04073 279 PGSH------GSTFGG-NPLACAVSIAALEVLEE--EKLPERSLELGEYFKEQLKE-IDN-PMIKEVR-GRGLFIGVELN 346 (396)
T ss_pred CCCC------CCCCCC-CHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHh-hcC-Cccccee-cceEEEEEEec
Confidence 2211 122233 44455555578877654 34567778889999999987 521 1111111 11344555554
Q ss_pred CCChHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHH
Q psy8850 300 FIEGESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKV 370 (397)
Q Consensus 300 ~~~~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~ 370 (397)
.+..++...|. ||.+.+. ..++|||+++..++++++++++++|++++
T Consensus 347 -~~~~~~~~~l~~~Gv~~~~~-----------------------~~~~iRi~p~l~~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 347 -EPARPYCEALKEEGLLCKET-----------------------HETVIRFAPPLVITKEELDWAFEKIKAVL 395 (396)
T ss_pred -chHHHHHHHHHHCCeEEecC-----------------------CCCEEEEECCcccCHHHHHHHHHHHHHHh
Confidence 24556766665 7776531 12789999998899999999999998865
No 258
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.92 E-value=2.7e-22 Score=188.56 Aligned_cols=321 Identities=17% Similarity=0.206 Sum_probs=206.5
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHh
Q psy8850 1 MDYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAH 80 (397)
Q Consensus 1 ~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~ 80 (397)
++|.+.++.|+++++++.+++..+ .+... ....+ ........+++.+++++|++. .++++|++.|+.+++.++
T Consensus 85 ~tNlg~s~l~~~vieAv~~~~~~y-~~l~~-~l~~g-~~g~r~~~le~~lA~l~gae~--alvv~sg~aAi~l~l~~l-- 157 (454)
T TIGR00474 85 HTNLGRAPLAEEAIEAVTDAARGY-SNLEY-DLETG-KRGSRYSHVEGLLCELTGAED--ALVVNNNAAAVLLALNTL-- 157 (454)
T ss_pred eccCCCCCCCHHHHHHHHHHHhcc-cchhc-ccccc-ccchHHHHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHh--
Confidence 356778889999999999998863 23221 11111 122457889999999999973 556788888998888654
Q ss_pred hhccCCCEEEEcCCCChhh---HHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcc--c--ccc
Q psy8850 81 FYKKRGKHIITVQTEHKSV---LDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEI--G--VIQ 153 (397)
Q Consensus 81 ~~~~~g~~vl~~~~~~~s~---~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~t--G--~~~ 153 (397)
.+|++|++++.+|..+ ......+...|++++.++.+ +..++++++++++++|++|++++++|++ | ...
T Consensus 158 ---~~GdeVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~--~~~~l~dle~aI~~~T~lv~~~h~sN~~~~G~~~~~ 232 (454)
T TIGR00474 158 ---AKGKEVIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGTT--NRTHLKDYEDAITENTALLLKVHTSNYRIVGFTEEV 232 (454)
T ss_pred ---CCcCEEEECCChhhhhcchhhHHHHHHHcCCEEEEeCCC--CCCCHHHHHHhcCcCCEEEEEEccCcccccCCCCCC
Confidence 5899999999886432 22223344459999998765 3358999999999999999999999984 6 478
Q ss_pred cHHHHHHHHHhcCcEEEEeccccc---------Ccccc--ccCcccccEEEeccccc-cCCCCceEEEEecCCCCccccc
Q psy8850 154 PILEIGELCRSKGVIFHCDAAQAV---------GKIDI--NIQNYKVDLMSFSAHKI-YGPKGIGALYIRRNPRTRIEAQ 221 (397)
Q Consensus 154 ~l~~i~~l~~~~gi~livD~a~~~---------~~~~~--~~~~~~~d~~~~s~~K~-~g~~g~g~~~~~~~~~~~~~~~ 221 (397)
|+++|+++||+||+++++|.+.+. +..+. +....++|++++|++|+ +|| ..|+++++++.++.++..
T Consensus 233 dl~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp-~~G~i~g~~~~i~~l~~~ 311 (454)
T TIGR00474 233 SIAELVALGREHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGP-QAGIIVGKKELIERLKKN 311 (454)
T ss_pred CHHHHHHHHHHcCCeEEEECCCcccccchhccCCCCcccccHhHcCCCEEEecCccccCCC-eEEEEEECHHHHHhhhhc
Confidence 999999999999999999986431 12221 33456899999999995 556 479999987665544321
Q ss_pred cccCCccccccCCCCchhHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHhhhc-CcE--EEeCCC
Q psy8850 222 IHGGGHEYGLRSGTLATHQIVGMGEAFRLARI------------EMKEELKRILFLQKRLYNGLMESI-EEI--YINGDM 286 (397)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~------------~~~~~~~~~~~~~~~l~~~l~~~~-~~~--~~~~~~ 286 (397)
... ..++. +-..++++.+++....+ -+....++..+++..+.+.|++.+ +++ .+....
T Consensus 312 ~l~----r~lr~---~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~ 384 (454)
T TIGR00474 312 PLT----RALRV---DKLTLAALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRLKAALGPGFELEIVPGL 384 (454)
T ss_pred hhH----HHHhh---ChHHHHHHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHHHhhccCCceEEEEEcC
Confidence 110 11111 12233444444443321 122335566777888888887611 332 333332
Q ss_pred ---------CCCCC-ceEEEEecCCChHHHHHHhC--C--cEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCC
Q psy8850 287 ---------NNRIP-HNLNISFNFIEGESLLMAIK--D--IAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGR 352 (397)
Q Consensus 287 ---------~~~~~-~~~~~~~~~~~~~~~~~~l~--~--i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~ 352 (397)
....+ ..+.+...+.+..++.+.|+ . |..+. ..+.+.+-+-.
T Consensus 385 ~~~ggg~~p~~~l~~~~v~~~~~~~~~~~l~~~lr~~~~~ii~r~------------------------~~~~~~ld~r~ 440 (454)
T TIGR00474 385 SQVGGGSLPDERLPSYAVTLTPDGLSAEKLEARLRELPPPIIGRI------------------------EDDRFLLDLRT 440 (454)
T ss_pred CcccCCCCcCCCCCeEEEEEecCCCCHHHHHHHHhcCCCCEEEEE------------------------ECCEEEEEeCc
Confidence 11222 22233333456788888887 2 22221 12555565553
Q ss_pred CCCHHHHHHHHHHH
Q psy8850 353 FTTEKEIDFTIKLL 366 (397)
Q Consensus 353 ~~~~~~i~~~~~~l 366 (397)
..++|++.+++.|
T Consensus 441 -~~~~~~~~~~~~~ 453 (454)
T TIGR00474 441 -LLEDEEELLIEAL 453 (454)
T ss_pred -CCHHHHHHHHHHh
Confidence 4678988888776
No 259
>PRK07505 hypothetical protein; Provisional
Probab=99.92 E-value=3.4e-22 Score=188.82 Aligned_cols=323 Identities=13% Similarity=0.082 Sum_probs=197.3
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhh-c-cC
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFY-K-KR 85 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~-~-~~ 85 (397)
..+|+|++++.+++... ++... .........+...++++.|+++++. ..++.++|++|+..++..+.... + ++
T Consensus 60 ~~~p~v~~A~~~~l~~~-g~~~~-~~~~~~~~~~~~~~l~~~la~~~~~---~~~~~~sG~~a~~~ai~~~~~~~~~~~~ 134 (402)
T PRK07505 60 DTHPAIIEGAVDALKRT-GSLHL-SSSRTRVRSQILKDLEEALSELFGA---SVLTFTSCSAAHLGILPLLASGHLTGGV 134 (402)
T ss_pred CCCHHHHHHHHHHHHHh-CCCCC-CccchhhhhHHHHHHHHHHHHHhCC---CEEEECChHHHHHHHHHHHHhcccCCCC
Confidence 34899999999999763 22111 1111112456788999999999987 34555567789988887544211 1 23
Q ss_pred CCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhc
Q psy8850 86 GKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSK 165 (397)
Q Consensus 86 g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~ 165 (397)
++.|+.....|++.... ......+.+++.+|.+ |++++++++.++++++++++|+||+|.+.|+++|.++|++|
T Consensus 135 ~~vi~~~~~~H~s~~~~-~~~~~~~~~v~~~~~~-----d~~~l~~~~~~~~~~~vl~~p~~~~G~~~~~~~i~~l~~~~ 208 (402)
T PRK07505 135 PPHMVFDKNAHASLNIL-KGICADETEVETIDHN-----DLDALEDICKTNKTVAYVADGVYSMGGIAPVKELLRLQEKY 208 (402)
T ss_pred CCEEEEchhhhHhHHhh-hhhhhcCCeEEEeCCC-----CHHHHHHHHhcCCCEEEEEecccccCCcCCHHHHHHHHHHc
Confidence 33445555566654322 2222235677888764 89999999987888899999999999999999999999999
Q ss_pred CcEEEEecccccCc---c----ccc-cC--cccccEEEeccccccCCCCceEEEE-ecCCCCccccccccCCccccccCC
Q psy8850 166 GVIFHCDAAQAVGK---I----DIN-IQ--NYKVDLMSFSAHKIYGPKGIGALYI-RRNPRTRIEAQIHGGGHEYGLRSG 234 (397)
Q Consensus 166 gi~livD~a~~~~~---~----~~~-~~--~~~~d~~~~s~~K~~g~~g~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 234 (397)
|+++|+|++|+.+. . ..+ .. ..+..+++.|++|.+|+.| |++++ +++..+.+...... ..+ .+
T Consensus 209 ~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~G-g~~~~~~~~~~~~~~~~~~~----~t~-~~ 282 (402)
T PRK07505 209 GLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGASG-GVIMLGDAEQIELILRYAGP----LAF-SQ 282 (402)
T ss_pred CCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhccC-eEEEeCCHHHHHHHHHhCCC----cee-CC
Confidence 99999999985321 1 111 11 1234577889999666544 77665 33333333322211 111 23
Q ss_pred CCchhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecC-CChHHHHHHhC-
Q psy8850 235 TLATHQIVGMGEAFRLARI-EMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF-IEGESLLMAIK- 311 (397)
Q Consensus 235 ~~~~~~~~~l~~al~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~- 311 (397)
.++...+++..++++...+ .+.+..+++.++.+.+.+.+.. + ..... ..+..+.++. ....++.+.|.
T Consensus 283 ~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~------~~g~~-~~i~~~~~~~~~~~~~~~~~l~~ 353 (402)
T PRK07505 283 SLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSLIPT--E------QSGSF-LPIRLIYIGDEDTAIKAAKQLLD 353 (402)
T ss_pred CCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHh--c------CCCCC-CCEEEEEeCCHHHHHHHHHHHHH
Confidence 4555667777677775432 3444444444444443332222 1 11111 1122223332 12456666665
Q ss_pred -CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHH
Q psy8850 312 -DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKK 372 (397)
Q Consensus 312 -~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 372 (397)
||.+.+...... ....++|||+++..++++|+++++++|++++++
T Consensus 354 ~Gi~v~~~~~p~~----------------~~~~~~lRi~~~~~~t~eei~~~~~~l~~~l~~ 399 (402)
T PRK07505 354 RGFYTSPVFFPVV----------------AKGRAGLRIMFRASHTNDEIKRLCSLLKEILDE 399 (402)
T ss_pred CCCeEeeecCCCC----------------CCCCceEEEecCccCCHHHHHHHHHHHHHHHHh
Confidence 888876522110 012368999999999999999999999988743
No 260
>PRK04311 selenocysteine synthase; Provisional
Probab=99.92 E-value=5.3e-22 Score=187.12 Aligned_cols=322 Identities=15% Similarity=0.145 Sum_probs=212.3
Q ss_pred CCCCCCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhh
Q psy8850 2 DYSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHF 81 (397)
Q Consensus 2 ~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~ 81 (397)
+|.+.++.++++.+++.+++..+. +... ....+ ........+++.+++++|++ ..++++|++.|+.+++.++
T Consensus 91 tNlg~s~l~~~v~eav~~~~~~~~-~le~-~l~~g-~~g~r~~~~e~~lA~l~Gae--~a~vv~sgtaAl~l~l~~l--- 162 (464)
T PRK04311 91 TNLGRALLSEAAIEAVTEAARGYS-NLEY-DLATG-KRGSRDRALAALLCALTGAE--DALVVNNNAAAVLLALNAL--- 162 (464)
T ss_pred ccCCCCCCCHHHHHHHHHHHhccc-cccc-chhhc-ccchHHHHHHHHHHHHhCCC--eEEEECCHHHHHHHHHHHh---
Confidence 566778899999999999987632 2221 11111 11245678999999999987 5778888999999888764
Q ss_pred hccCCCEEEEcCCCChhhH---HHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCc--cc--cccc
Q psy8850 82 YKKRGKHIITVQTEHKSVL---DSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNE--IG--VIQP 154 (397)
Q Consensus 82 ~~~~g~~vl~~~~~~~s~~---~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~--tG--~~~~ 154 (397)
.+|++|++++.+|..+. .....+...|++++.++.+. ..++++++++++++|++|++++++|+ +| ...|
T Consensus 163 --~~GdeVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~~--~t~~~dle~aI~~~TklV~~vh~sN~~i~G~~~~~d 238 (464)
T PRK04311 163 --AAGKEVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGTTN--RTHLRDYEQAINENTALLLKVHTSNYRIEGFTKEVS 238 (464)
T ss_pred --CCCCEEEEcchhhhhcCcchhhHHHHHHCCcEEEEECCCC--CCCHHHHHHhcCccCeEEEEEcCCCccccccCCcCC
Confidence 58899999988766321 11223344599999997643 35799999999999999999999998 35 5679
Q ss_pred HHHHHHHHHhcCcEEEEecccccC---------ccc--cccCcccccEEEeccccc-cCCCCceEEEEecCCCCcccccc
Q psy8850 155 ILEIGELCRSKGVIFHCDAAQAVG---------KID--INIQNYKVDLMSFSAHKI-YGPKGIGALYIRRNPRTRIEAQI 222 (397)
Q Consensus 155 l~~i~~l~~~~gi~livD~a~~~~---------~~~--~~~~~~~~d~~~~s~~K~-~g~~g~g~~~~~~~~~~~~~~~~ 222 (397)
+++|+++||+||+++++|++++.- ..+ .+....++|++++|++|+ +|| ..|+++++++..+.++..-
T Consensus 239 l~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp-~~G~i~g~~~li~~l~~~~ 317 (464)
T PRK04311 239 LAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGP-QAGIIVGKKELIARLKKHP 317 (464)
T ss_pred HHHHHHHHHHcCCeEEEECCCcccccchhccCCCCCchhhHHhcCCcEEEecCcccccCC-ceEEEEEcHHHHHHHhhch
Confidence 999999999999999999964311 111 122235899999999995 556 5799999987665543211
Q ss_pred ccCCccccccCCCCchhHHHHHHHHHHHHHH---------H---HHHHHHHHHHHHHHHHHHHhhhcC--c--EEEeCC-
Q psy8850 223 HGGGHEYGLRSGTLATHQIVGMGEAFRLARI---------E---MKEELKRILFLQKRLYNGLMESIE--E--IYINGD- 285 (397)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~---------~---~~~~~~~~~~~~~~l~~~l~~~~~--~--~~~~~~- 285 (397)
.. ..+ ..+-..+.++.+++....+ . +....++..++++.+.+.|+. .. + ..+...
T Consensus 318 ~~----r~l---r~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~-~~~~~~~~~~~~~~ 389 (464)
T PRK04311 318 LK----RAL---RVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKA-ALGAAFAVEVVPSF 389 (464)
T ss_pred hH----HHH---hcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHh-ccCCCeeEEEEEcc
Confidence 10 111 1223445555555553321 1 223356777788888888877 32 2 234422
Q ss_pred --------CCCCCCceEEEEe--cCCChHHHHHHhCC----cEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeC
Q psy8850 286 --------MNNRIPHNLNISF--NFIEGESLLMAIKD----IAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIG 351 (397)
Q Consensus 286 --------~~~~~~~~~~~~~--~~~~~~~~~~~l~~----i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~ 351 (397)
+....+ -+.+.+ ...+..++...|+. |..+.. .+.+.+-+-
T Consensus 390 ~~~gggs~p~~~~~-~~~v~~~~~~~~~~~l~~~lr~~~~~i~~r~~------------------------~~~~~ld~r 444 (464)
T PRK04311 390 SQVGGGSLPVDRLP-SAAVTLTPKDRSLEALAARLRLLPPPVIGRIE------------------------DGRLLLDLR 444 (464)
T ss_pred CccCCCCCcCCCCC-eEEEEEeCCCCCHHHHHHHHhcCCCCEEEEEE------------------------CCEEEEEeC
Confidence 111112 223333 34567888888872 333211 255666655
Q ss_pred CCCCHHHHHHHHHHHHHHH
Q psy8850 352 RFTTEKEIDFTIKLLKMKV 370 (397)
Q Consensus 352 ~~~~~~~i~~~~~~l~~~~ 370 (397)
. ..++|++.++++|++++
T Consensus 445 ~-~~~~~~~~~~~~~~~~~ 462 (464)
T PRK04311 445 T-LEEEDEERLAAALLEAL 462 (464)
T ss_pred c-CCHHHHHHHHHHHHHHh
Confidence 4 57899999999998875
No 261
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.92 E-value=2.2e-22 Score=190.44 Aligned_cols=316 Identities=17% Similarity=0.206 Sum_probs=206.3
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhh-c---
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFY-K--- 83 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~-~--- 83 (397)
..+|.|.+++.+.+.... ...+ .+ ..+...++++.++++++.+ .+++++||++|++.+++.+.... +
T Consensus 47 h~~p~v~~a~~~~~~~~~-~~~~-~~-----~~~~~~~~~~~l~~~~~~~--~~~~~~SGs~A~e~al~~~~~~~~~~~~ 117 (400)
T PTZ00125 47 HCHPKILAALINQAQKLT-LTSR-AF-----YNDVLGLAEKYITDLFGYD--KVLPMNSGAEAGETALKFARKWGYEVKG 117 (400)
T ss_pred cCCHHHHHHHHHHHHhcc-cccc-cc-----cCHHHHHHHHHHHhCCCCC--EEEEeCCcHHHHHHHHHHHHHHHHhccC
Confidence 468999999999986522 1111 11 1346788899999888764 79999999999999999765321 1
Q ss_pred --cCCCEEEEcCCCChhhHHHHHHHhhC-Cc---------EEEEeccCCCCCCCHHHHHHHhc-CCceEEEEecccCccc
Q psy8850 84 --KRGKHIITVQTEHKSVLDSIRKLEND-GF---------RVTYLKPKNNGLITLSQLEEKIC-SDTILVSVMLVNNEIG 150 (397)
Q Consensus 84 --~~g~~vl~~~~~~~s~~~~~~~~~~~-g~---------~v~~v~~~~~~~~d~~~l~~~i~-~~~~~v~~~~~~~~tG 150 (397)
..+++|++.+..|++........... .. .+..++ ..|++++++.+. +++++|++++++|++|
T Consensus 118 ~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~~le~~l~~~~~~~v~~ep~~~~~G 192 (400)
T PTZ00125 118 IPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVD-----YNDVEALEKLLQDPNVAAFIVEPIQGEAG 192 (400)
T ss_pred CCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeC-----CCCHHHHHHHhCCCCeEEEEEcCccCCCC
Confidence 13467777777666655443322111 00 111222 238999999996 6799999999999999
Q ss_pred cccc----HHHHHHHHHhcCcEEEEecccc-cCc----cccccCcccccEEEecccc-ccCCC-CceEEEEecCCCCccc
Q psy8850 151 VIQP----ILEIGELCRSKGVIFHCDAAQA-VGK----IDINIQNYKVDLMSFSAHK-IYGPK-GIGALYIRRNPRTRIE 219 (397)
Q Consensus 151 ~~~~----l~~i~~l~~~~gi~livD~a~~-~~~----~~~~~~~~~~d~~~~s~~K-~~g~~-g~g~~~~~~~~~~~~~ 219 (397)
.+.| +++|.++|++||+++|+|++|+ +|. ...+.....+|++++| | +.++. ++|+++++++..+.+.
T Consensus 193 ~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~~~~~~~~~pd~~~~s--K~l~~g~~~ig~v~~~~~~~~~~~ 270 (400)
T PTZ00125 193 VIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLAHDHEGVKPDIVLLG--KALSGGLYPISAVLANDDVMLVIK 270 (400)
T ss_pred CccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhHHHhcCCCCCEEEEc--ccccCCCcCcEEEEEcHHHHhhcc
Confidence 9998 8999999999999999999986 331 1222233457888765 9 54442 5899999877655544
Q ss_pred cccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---cCcEEEeCCCCCCCCceEEE
Q psy8850 220 AQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMES---IEEIYINGDMNNRIPHNLNI 296 (397)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~~~~~~~~~~~~~~ 296 (397)
....+ ...+ .+.....+..++++.+.++ .+.++..++.+++++.|++. .+.+..... .+.++.+
T Consensus 271 ~~~~~------~t~~-~~~~~~~aa~~~l~~i~~~--~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~----~g~~~~v 337 (400)
T PTZ00125 271 PGEHG------STYG-GNPLACAVAVEALEVLKEE--KLAENAQRLGEVFRDGLKELLKKSPWVKEIRG----KGLLNAI 337 (400)
T ss_pred CCCCC------CCCC-cCHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHhcCCCeEEEec----ccEEEEE
Confidence 32211 1122 2334455555677776542 34556666777777777661 122211211 1445556
Q ss_pred EecC---CChHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHH
Q psy8850 297 SFNF---IEGESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVK 371 (397)
Q Consensus 297 ~~~~---~~~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 371 (397)
.++. ....++...|. ||.+.++. .+.|||+++..++++++++++++|.+++.
T Consensus 338 ~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-----------------------~~~lRi~~~~~~~~~~i~~~l~~l~~~l~ 394 (400)
T PTZ00125 338 VFDHSDGVNAWDLCLKLKENGLLAKPTH-----------------------DNIIRFAPPLVITKEQLDQALEIIKKVLK 394 (400)
T ss_pred EEccCcchHHHHHHHHHHHCCeEEeecC-----------------------CCEEEEECCccCCHHHHHHHHHHHHHHHH
Confidence 6653 23455666664 77776531 27899999888999999999999999988
Q ss_pred HHHh
Q psy8850 372 KLRE 375 (397)
Q Consensus 372 ~~~~ 375 (397)
++.+
T Consensus 395 ~~~~ 398 (400)
T PTZ00125 395 SFDS 398 (400)
T ss_pred HHhc
Confidence 7643
No 262
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.92 E-value=7.3e-22 Score=182.51 Aligned_cols=259 Identities=18% Similarity=0.230 Sum_probs=186.9
Q ss_pred CcchhhhHHHHHHHHHHHHHHHhCCCC-------CcEEEeCChhHHHHHHHHHhHhhhc----------cCCCEEEEcCC
Q psy8850 32 NHIYGWTAEKAIEKARNEVAQLIYADP-------REIIWTSGATESNNLAIKGAAHFYK----------KRGKHIITVQT 94 (397)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~la~~~~~~~-------~~i~~~~g~t~a~~~~l~~l~~~~~----------~~g~~vl~~~~ 94 (397)
.+..++...+...++-+++++++|.+. ...++|+|||+++..++.+...+.. .++..|++++.
T Consensus 70 ~~~~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~ 149 (373)
T PF00282_consen 70 TWEASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQ 149 (373)
T ss_dssp STTTSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETT
T ss_pred ccccccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccc
Confidence 344466777888899999999999882 2489999999999998877654321 12347899999
Q ss_pred CChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcC---C---ceEEEEecccCcccccccHHHHHHHHHhcCcE
Q psy8850 95 EHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS---D---TILVSVMLVNNEIGVIQPILEIGELCRSKGVI 168 (397)
Q Consensus 95 ~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~---~---~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~ 168 (397)
.|+|..+++..+ |+.++.||+++++.+|+++|++++.+ + +-+|+.+..++.+|.+.|+++|+++|++++++
T Consensus 150 aH~S~~Kaa~~l---Glg~~~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~w 226 (373)
T PF00282_consen 150 AHYSIEKAARIL---GLGVRKIPTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIW 226 (373)
T ss_dssp S-THHHHHHHHT---TSEEEEE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-E
T ss_pred cccHHHHhccee---eeEEEEecCCcchhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhcccccee
Confidence 999999999998 99999999999999999999998854 2 44788999999999999999999999999999
Q ss_pred EEEecccccCcc-cc-----ccCcccccEEEecccc-ccCCCCceEEEEecCCCC-c-c--c-cccccCC-------ccc
Q psy8850 169 FHCDAAQAVGKI-DI-----NIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRT-R-I--E-AQIHGGG-------HEY 229 (397)
Q Consensus 169 livD~a~~~~~~-~~-----~~~~~~~d~~~~s~~K-~~g~~g~g~~~~~~~~~~-~-~--~-~~~~~~~-------~~~ 229 (397)
+|||++++.... .. ...--.+|+++.++|| ++.|.++|+++++++... . + . .++.... ...
T Consensus 227 lHVDaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~~~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~ 306 (373)
T PF00282_consen 227 LHVDAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLGVPYGCGVLLVRDKSDLRDAFSINADYLGNDDRESDESYDYG 306 (373)
T ss_dssp EEEEETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS-SSS-EEEEESSGGGHHGGGEEEETCTT-S-SSS-GGGCEE
T ss_pred eeecccccccccccccccccccccccccccccchhhhhcCCccceeEEeecccchHHHhccChhhhcccccccccccccc
Confidence 999999986332 11 1111268999999999 566889999999875321 1 1 1 1111000 000
Q ss_pred ccc-CCCCchhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEe
Q psy8850 230 GLR-SGTLATHQIVGMGEAFRLA-RIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISF 298 (397)
Q Consensus 230 ~~~-~~~~~~~~~~~l~~al~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (397)
... .++. -...+.++.+++.+ .+++.++.++..++++++.+.|++ .+.+.+..++. ..+++|++
T Consensus 307 ~~tl~~SR-~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~-~~~~el~~~~~---~~~vcFr~ 372 (373)
T PF00282_consen 307 DYTLQGSR-RFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRK-DPRFELVNEPD---LNIVCFRY 372 (373)
T ss_dssp EGSSSSSG-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-STTEEESSTTS---SSEEEEEE
T ss_pred cccccccc-cchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEcCCC---ceEEEEEe
Confidence 011 1122 34456666677644 678999999999999999999999 88899888655 45555554
No 263
>PLN02397 aspartate transaminase
Probab=99.91 E-value=1.4e-22 Score=192.01 Aligned_cols=311 Identities=15% Similarity=0.122 Sum_probs=191.9
Q ss_pred HHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhC-CC-----CCcEEE--eCChhHHHH--HHHHHhHh
Q psy8850 11 PRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIY-AD-----PREIIW--TSGATESNN--LAIKGAAH 80 (397)
Q Consensus 11 ~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~-~~-----~~~i~~--~~g~t~a~~--~~l~~l~~ 80 (397)
+.+.+++.+...... ++ .....|....+..++|+++++++. .. +++|.. +.+++.+.. ..+..+.
T Consensus 65 p~~~~~~~~a~~~~~-~~---~~~~~Y~~~~G~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~Ga~~l~~~~~~~~- 139 (423)
T PLN02397 65 PVVLNVVRKAEQRLL-AG---SRNKEYLPIEGLAEFNKLSAKLAYGADSPAIKENRVATVQCLSGTGSLRLGAEFLARF- 139 (423)
T ss_pred cccchHHHHHHHHhh-cc---CCCCCCCCcCCCHHHHHHHHHHHcCCCCchhhcCeeEeeecccchHHHHHHHHHHHHh-
Confidence 355566666543321 11 111123445577888898888763 21 123321 334444433 3333333
Q ss_pred hhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEecc-C-CCCCCCHHHHHHHhc---CCceEEEEecccCccccccc-
Q psy8850 81 FYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKP-K-NNGLITLSQLEEKIC---SDTILVSVMLVNNEIGVIQP- 154 (397)
Q Consensus 81 ~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~-~-~~~~~d~~~l~~~i~---~~~~~v~~~~~~~~tG~~~~- 154 (397)
.+||+|++++|+|+.+...+... |.+++.+|. + +++.+|++.+++.+. ++++++++++||||||.+++
T Consensus 140 ---~pGd~Vlv~~P~y~~y~~~~~~~---g~~~~~v~l~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~ 213 (423)
T PLN02397 140 ---YPGSTIYIPNPTWGNHHNIFRDA---GVPVRTYRYYDPKTRGLDFDGLLEDLKAAPDGSFVLLHACAHNPTGVDPTP 213 (423)
T ss_pred ---CCCCEEEEeCCCchhHHHHHHHc---CCeEEEeecccCcCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCH
Confidence 58999999999999999888887 999999987 3 346789998888775 46789999999999999998
Q ss_pred --HHHHHHHHHhcCcEEEEecccccCcc--------cc-ccCcc-cccEEEeccccccCCCC--ceEEE--Ee-cCCCCc
Q psy8850 155 --ILEIGELCRSKGVIFHCDAAQAVGKI--------DI-NIQNY-KVDLMSFSAHKIYGPKG--IGALY--IR-RNPRTR 217 (397)
Q Consensus 155 --l~~i~~l~~~~gi~livD~a~~~~~~--------~~-~~~~~-~~d~~~~s~~K~~g~~g--~g~~~--~~-~~~~~~ 217 (397)
+++|+++|++||++||+|++|..... +. .+... ...+++.|++|.+++.| +|+++ .. ++....
T Consensus 214 e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~RvG~~v~~~~~~~~~~~ 293 (423)
T PLN02397 214 EQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLYGERVGALSVVCKSADVAVR 293 (423)
T ss_pred HHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEEEEECcccCCCccccceEEEEEeCCHHHHHH
Confidence 46688889999999999999872211 11 11111 23577899999777555 68875 32 222121
Q ss_pred cccccccCCccccccCCCCchhHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHhhhcC---cEEEeCCCCC
Q psy8850 218 IEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLA------RIEMKEELKRILFLQKRLYNGLMESIE---EIYINGDMNN 288 (397)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~------~~~~~~~~~~~~~~~~~l~~~l~~~~~---~~~~~~~~~~ 288 (397)
+...+... ........+.....+...+++.. .+.+++..+.++++++.+.+.|++ +. ++.+..+++
T Consensus 294 ~~~~~~~~---~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~-~~~~~~~~~~~p~g- 368 (423)
T PLN02397 294 VKSQLKLI---ARPMYSNPPIHGASIVATILGDPELFSEWTKELKGMADRIISMRQKLYDALEA-RGSPGDWSHITKQI- 368 (423)
T ss_pred HHHHHHHH---HhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCCCCCcccCCc-
Confidence 11111000 00001122333333333344321 123667788999999999999998 52 144333322
Q ss_pred CCCceEEEEecCCChHHHHHHhC---CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHH
Q psy8850 289 RIPHNLNISFNFIEGESLLMAIK---DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKL 365 (397)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~l~---~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~ 365 (397)
+.++++. .+ .++...|. +|.+..+ + |+++.. .+.+++++++++
T Consensus 369 --g~fl~~~---l~-~~~~~~Ll~~~~V~v~~~-------------------------~--Ri~~~~-~~~~~i~~~~~~ 414 (423)
T PLN02397 369 --GMFSFTG---LN-KEQVDRMTKEYHIYMTRD-------------------------G--RISMAG-LSSKNVPYLADA 414 (423)
T ss_pred --eEEEecC---CC-HHHHHHHHHhCCEEECCC-------------------------C--eEEEee-CCHHHHHHHHHH
Confidence 2233333 33 34666664 6776522 3 999974 589999999999
Q ss_pred HHHHHH
Q psy8850 366 LKMKVK 371 (397)
Q Consensus 366 l~~~~~ 371 (397)
|+++++
T Consensus 415 i~~~~~ 420 (423)
T PLN02397 415 IHAVVT 420 (423)
T ss_pred HHHHHh
Confidence 999974
No 264
>KOG0634|consensus
Probab=99.91 E-value=4.8e-22 Score=176.08 Aligned_cols=307 Identities=16% Similarity=0.116 Sum_probs=210.3
Q ss_pred hHHHHHHHHHHHHHHHhC----CCCC---cEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHHhhCC
Q psy8850 38 TAEKAIEKARNEVAQLIY----ADPR---EIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDG 110 (397)
Q Consensus 38 ~~~~~~~~~~~~la~~~~----~~~~---~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g 110 (397)
....+..++...+.+..+ .++. ++.+|+|.|.++..++..++ ++||.|++....|++...+++.+ |
T Consensus 97 g~s~G~peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~----N~gd~vlie~~ty~~AL~s~~a~---g 169 (472)
T KOG0634|consen 97 GQSSGIPELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLI----NRGDHVLIEEYTYPSALQSMEAL---G 169 (472)
T ss_pred ccccCcHHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhh----cCCCceEEecccchHHHHhcccc---C
Confidence 334456666666666555 2322 59999999999999999999 89999999999888888777777 9
Q ss_pred cEEEEeccCCCCCCCHHHHHHHhcC---------Cce-EEEEecccCcccccccH---HHHHHHHHhcCcEEEEeccccc
Q psy8850 111 FRVTYLKPKNNGLITLSQLEEKICS---------DTI-LVSVMLVNNEIGVIQPI---LEIGELCRSKGVIFHCDAAQAV 177 (397)
Q Consensus 111 ~~v~~v~~~~~~~~d~~~l~~~i~~---------~~~-~v~~~~~~~~tG~~~~l---~~i~~l~~~~gi~livD~a~~~ 177 (397)
.+++.|+.|++| +++|.|++.+.. ++. +.+++..+||||...++ ++|.++||+|++++|+|+.|.+
T Consensus 170 v~~ipv~md~~G-i~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~ 248 (472)
T KOG0634|consen 170 VKIIPVKMDQDG-IDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYF 248 (472)
T ss_pred ceEEeccccCCC-CCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCccce
Confidence 999999998888 789999998752 243 55899999999999996 5799999999999999999863
Q ss_pred Cccc--------------------------cccCcccccEEEeccccccCCC-CceEEEEecCCCCccccccccCCcccc
Q psy8850 178 GKID--------------------------INIQNYKVDLMSFSAHKIYGPK-GIGALYIRRNPRTRIEAQIHGGGHEYG 230 (397)
Q Consensus 178 ~~~~--------------------------~~~~~~~~d~~~~s~~K~~g~~-g~g~~~~~~~~~~~~~~~~~~~~~~~~ 230 (397)
-... ++++.-+..+-.-||+|+.+|. .+|++.+++..++++.....
T Consensus 249 Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPGlRlG~it~~~~~l~ril~~ae------- 321 (472)
T KOG0634|consen 249 LQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPGLRLGWITGNSLFLKRILDLAE------- 321 (472)
T ss_pred eeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhcCcceeEEeecCHHHHHHHhhhcc-------
Confidence 2211 1111114456678999977763 37888888655555432211
Q ss_pred ccCCCCchhHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHhhhcCcE-EEeCCCCCCCCceEEEEec-----
Q psy8850 231 LRSGTLATHQIVGMGEAFRLA-----RIEMKEELKRILFLQKRLYNGLMESIEEI-YINGDMNNRIPHNLNISFN----- 299 (397)
Q Consensus 231 ~~~~~~~~~~~~~l~~al~~~-----~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~----- 299 (397)
.....++.....-+.+.++.+ .+++.+++..+..++..+..+|.+++|.. ..+.++. .+.++++.++
T Consensus 322 ~~t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~--aGmFiwv~i~~~~~~ 399 (472)
T KOG0634|consen 322 VATSGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPK--AGMFIWVEIPYINFD 399 (472)
T ss_pred eeecCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCC--cceEEEEEecccccc
Confidence 111112222222233344433 23577788899999999999999988875 3333322 2567778775
Q ss_pred ---CCC-hHHHHHHh--C-CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHH
Q psy8850 300 ---FIE-GESLLMAI--K-DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKK 372 (397)
Q Consensus 300 ---~~~-~~~~~~~l--~-~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 372 (397)
..+ .+++...+ + ||.+.+|..|... ....+..-++|++++. .+.+++++.++++..++++
T Consensus 400 ~~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~------------p~~s~~kiffRls~a~-a~~e~l~~g~~rf~~~ike 466 (472)
T KOG0634|consen 400 TKKSINQIEEIIFIKAVKNGVKLVCGSWFMVD------------PESSWSKIFFRLSIAF-AEPEKLDEGIERFGSVIKE 466 (472)
T ss_pred cccchHHHHHHHHHHHHHCCeEEecCceeEEc------------CccCCCcceEEEEeec-CCHHHHHHHHHHHHHHHHH
Confidence 122 12222222 2 9999999877641 0011122489999997 4688999999999999887
Q ss_pred HH
Q psy8850 373 LR 374 (397)
Q Consensus 373 ~~ 374 (397)
.-
T Consensus 467 ~f 468 (472)
T KOG0634|consen 467 HF 468 (472)
T ss_pred Hh
Confidence 53
No 265
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.91 E-value=9.2e-22 Score=186.06 Aligned_cols=315 Identities=16% Similarity=0.163 Sum_probs=200.7
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhcc---
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKK--- 84 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~--- 84 (397)
+.+|.+.+++.+.+.... .... . ...+...++.+.++++.+. +++++++||++|++++++.+.....+
T Consensus 55 ~~~p~v~~a~~~~~~~~~-~~~~-~-----~~~~~~~~la~~l~~~~~~--~~v~~~~gg~eA~~~al~~a~~~~~~~~~ 125 (396)
T PRK02627 55 HCHPKLVEAIQEQAAKLI-HTSN-L-----YYIEPQEELAEKLVELSGM--DKVFFCNSGAEANEAAIKLARKYGHKKGI 125 (396)
T ss_pred CCCHHHHHHHHHHHhhcc-cccc-c-----cCCHHHHHHHHHHHhhcCC--CEEEECCCcHHHHHHHHHHHHHHhcccCC
Confidence 446899999999887532 1111 1 1145667788888888765 58999999999999999976532211
Q ss_pred CCCEEEEcCCCChhhHHHHHHHhhCCcEE---EEeccCCCC----CCCHHHHHHHhcCCceEEEEecccCcccc-ccc--
Q psy8850 85 RGKHIITVQTEHKSVLDSIRKLENDGFRV---TYLKPKNNG----LITLSQLEEKICSDTILVSVMLVNNEIGV-IQP-- 154 (397)
Q Consensus 85 ~g~~vl~~~~~~~s~~~~~~~~~~~g~~v---~~v~~~~~~----~~d~~~l~~~i~~~~~~v~~~~~~~~tG~-~~~-- 154 (397)
++++|++..+.|+.......... +... ...+...+. ..|++++++++.+++++|++++++|++|. .+|
T Consensus 126 ~~~~ii~~~~~yhg~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~vii~p~~~~~G~~~~~~~ 203 (396)
T PRK02627 126 EKPEIITAENSFHGRTLATLSAT--GQPKYQEGFEPLVEGFIYVPFNDIEALKAAITDKTAAVMLEPIQGEGGVNPADKE 203 (396)
T ss_pred CCCeEEEECCCcCcccHHHHHhc--CCccccccCCCCCCCceEeCCCCHHHHHHhcCCCeEEEEEecccCCCCCccCCHH
Confidence 12678888887766554433331 1111 111211111 12899999999889999999999999994 444
Q ss_pred -HHHHHHHHHhcCcEEEEecccc-cCcc----ccccCcccccEEEeccccccC-CCCceEEEEecCCCCccccccccCCc
Q psy8850 155 -ILEIGELCRSKGVIFHCDAAQA-VGKI----DINIQNYKVDLMSFSAHKIYG-PKGIGALYIRRNPRTRIEAQIHGGGH 227 (397)
Q Consensus 155 -l~~i~~l~~~~gi~livD~a~~-~~~~----~~~~~~~~~d~~~~s~~K~~g-~~g~g~~~~~~~~~~~~~~~~~~~~~ 227 (397)
+++|.++|++||+++|+|++|+ ++.. ..+.....+|+++ ++|.++ +..+|+++++++..+.+......
T Consensus 204 ~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~~~~~~~~~~pdi~t--~sK~~~~G~rig~~~~~~~~~~~~~~~~~~--- 278 (396)
T PRK02627 204 YLQALRELCDENGILLILDEVQTGMGRTGKLFAYQHYGIEPDIMT--LAKGLGGGVPIGAVLAKEKVADVFTPGDHG--- 278 (396)
T ss_pred HHHHHHHHHHHcCCEEEEechhcCCCccCceeeehhcCCCCCEEE--EcchhhCCcccEEEEEcHHHHhccCCCCCC---
Confidence 7899999999999999999987 3221 1122233467665 559444 33489999987655544332111
Q ss_pred cccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---cCcEEEeCCCCCCCCceEEEEecCCChH
Q psy8850 228 EYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMES---IEEIYINGDMNNRIPHNLNISFNFIEGE 304 (397)
Q Consensus 228 ~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (397)
... ..+.....+..++++.+.+ .+..++++++.+++++.|.+. ++.+.... ..+.++++.++ .+..
T Consensus 279 ---~t~-~~~~~~~~aa~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~----~~g~~~~i~~~-~~~~ 347 (396)
T PRK02627 279 ---STF-GGNPLACAAALAVIEIIEE--EGLLENAAEVGEYLRAKLRELLEKYPGIKEVR----GLGLMIGIELD-RPAA 347 (396)
T ss_pred ---CCC-CCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHHhCCCeeeec----cCcEEEEEEec-CcHH
Confidence 112 2344555555577776543 234555556666666655541 22221111 12445666663 3566
Q ss_pred HHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHH
Q psy8850 305 SLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKK 372 (397)
Q Consensus 305 ~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 372 (397)
++...+. ||.+.++. .+++|++++..++++++++++++|.+++++
T Consensus 348 ~~~~~l~~~Gv~v~~~~-----------------------~~~lRi~~~~~~~~~~i~~~~~~l~~~l~~ 394 (396)
T PRK02627 348 EIVKKALEKGLLINVTG-----------------------DNVLRLLPPLIISKEEIDEAVDRLEEVLKE 394 (396)
T ss_pred HHHHHHHHCCeEEeecC-----------------------CCEEEEECCcccCHHHHHHHHHHHHHHHHh
Confidence 7776665 78887641 267999998778999999999999998865
No 266
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.91 E-value=2.4e-21 Score=178.28 Aligned_cols=328 Identities=17% Similarity=0.177 Sum_probs=216.9
Q ss_pred CCCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCC-CCcEEEeCChhHHHHHHHHHhHhhhc
Q psy8850 5 ATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYAD-PREIIWTSGATESNNLAIKGAAHFYK 83 (397)
Q Consensus 5 ~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~-~~~i~~~~g~t~a~~~~l~~l~~~~~ 83 (397)
..+..+|.|++++++++.... ..+. .+. ..+...++.+.|.+++..+ ...++|+++|++|++++++. .+.++
T Consensus 69 ~~GH~hP~Vv~Av~~q~~~~~-h~~~-~~~----~~e~~v~~ae~L~~~~p~~~~~~~~f~~sGaeA~E~AiKi-Ar~~T 141 (447)
T COG0160 69 NLGHNHPRVVEAVKRQLAKLN-HTHT-RDL----YYEPYVELAEKLTALAPGSGLKKVFFGNSGAEAVEAAIKI-ARAYT 141 (447)
T ss_pred ccCCCCHHHHHHHHHHHHHhh-cccC-Ccc----cchhHHHHHHHHHHhCCcccCCeEEecCCcHHHHHHHHHH-HHHHh
Confidence 345679999999999988733 1111 111 1145667777777777763 44699999999999999994 55666
Q ss_pred cCCCEEEEcCCCChhhHHHHHHHhhC-----C-----cEEEEeccCCCC------------CCCHHHHHHHhc------C
Q psy8850 84 KRGKHIITVQTEHKSVLDSIRKLEND-----G-----FRVTYLKPKNNG------------LITLSQLEEKIC------S 135 (397)
Q Consensus 84 ~~g~~vl~~~~~~~s~~~~~~~~~~~-----g-----~~v~~v~~~~~~------------~~d~~~l~~~i~------~ 135 (397)
++...|.+....|..+..++...... | ..+..+|..... .-..+.+++.+. +
T Consensus 142 gr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~ 221 (447)
T COG0160 142 GRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGPE 221 (447)
T ss_pred CCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCCCC
Confidence 76666666666667777666654322 1 136666665321 112344555442 2
Q ss_pred CceEEEEecccCccccccc----HHHHHHHHHhcCcEEEEeccccc-Ccc----ccccCcccccEEEecccc-ccCCCCc
Q psy8850 136 DTILVSVMLVNNEIGVIQP----ILEIGELCRSKGVIFHCDAAQAV-GKI----DINIQNYKVDLMSFSAHK-IYGPKGI 205 (397)
Q Consensus 136 ~~~~v~~~~~~~~tG~~~~----l~~i~~l~~~~gi~livD~a~~~-~~~----~~~~~~~~~d~~~~s~~K-~~g~~g~ 205 (397)
++.+++++.++...|.+.| ++++.++|++||+++|+|++|+. |.. .+......+|++++| | +.++..+
T Consensus 222 ~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~~fa~E~~gv~PDivt~a--K~ig~G~Pl 299 (447)
T COG0160 222 EVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIVTLA--KSLGGGLPL 299 (447)
T ss_pred ceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccccchhhhhcCCCCCEEEec--ccccCCCce
Confidence 5789999999999999877 78999999999999999999972 221 223333468999998 9 7666668
Q ss_pred eEEEEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCC
Q psy8850 206 GALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGD 285 (397)
Q Consensus 206 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 285 (397)
|.++.+++... ..+-.++ ++.+.++. .+++..+.|+.+.+ +.+.++..++.++|+++|.+.-....++++
T Consensus 300 ~avv~r~ei~~-~~~g~~~------~Tf~GNpv-a~Aaa~AvL~vie~--e~L~~~a~~~G~~l~~~L~~l~~~~~~Igd 369 (447)
T COG0160 300 SAVVGRAEIMD-WPPGGHG------GTFGGNPV-ACAAALAVLDVIEE--ENLLERAAELGEYLRDRLEELQEKHPLIGD 369 (447)
T ss_pred eEEeccHHhcc-cCCcccC------CCCCcCHH-HHHHHHHHHHHHHH--ccHHHHHHHHHHHHHHHHHHHHhhcCceec
Confidence 99999987666 3333322 22344444 44444488887766 478888888888998888762233334433
Q ss_pred CCCCCCceEEEEecCC-----Ch----HHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCC
Q psy8850 286 MNNRIPHNLNISFNFI-----EG----ESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFT 354 (397)
Q Consensus 286 ~~~~~~~~~~~~~~~~-----~~----~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~ 354 (397)
.- ..+.++-+.+... +. ..+...+. |+.+... |. .++.|||.++..+
T Consensus 370 VR-G~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~~~Glil~~~-----------------G~----~~nviRi~PPL~i 427 (447)
T COG0160 370 VR-GLGLMIGVELVKDRDTKEPDAELAAKIVARAFERGLLLLTC-----------------GP----HGNVLRILPPLTI 427 (447)
T ss_pred cc-ccceEEEEEEecCCCCCCCCHHHHHHHHHHHHHcCCEEecc-----------------CC----CCcEEEEeCCccc
Confidence 21 1234445555421 22 23333333 6544432 11 1389999999999
Q ss_pred CHHHHHHHHHHHHHHHHHH
Q psy8850 355 TEKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 355 ~~~~i~~~~~~l~~~~~~~ 373 (397)
+++++|.+++.|.+++.++
T Consensus 428 s~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 428 SDEELDEGLDILEEALKEA 446 (447)
T ss_pred CHHHHHHHHHHHHHHHHhh
Confidence 9999999999999998764
No 267
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.91 E-value=2.5e-22 Score=187.28 Aligned_cols=311 Identities=17% Similarity=0.148 Sum_probs=205.3
Q ss_pred HHHHHHHHHHHHHHHhCCCC-CcEEEeCChh-HHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEe
Q psy8850 39 AEKAIEKARNEVAQLIYADP-REIIWTSGAT-ESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYL 116 (397)
Q Consensus 39 ~~~~~~~~~~~la~~~~~~~-~~i~~~~g~t-~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v 116 (397)
.......+++.+++++|++. +..++++|+| .++.+++.++... ..++++|+++...|.++..++..+ |++++.+
T Consensus 103 ~~~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~-~~~gd~VI~p~~th~S~~kAi~~~---G~~pv~V 178 (444)
T TIGR03531 103 LYKLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHK-RPKAKYVIWPRIDQKSCIKAISTA---GFEPRVI 178 (444)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCc-CCCCCEEEEECcChHHHHHHHHHc---CCeEEEe
Confidence 34577789999999999873 3488899999 6888887765421 125799999999999999999988 9999999
Q ss_pred cc---CCCCCCCHHHHHHHhcC---CceEEEEeccc-CcccccccHHHHHHHHHhcCcEEEEecccccCcccc-----cc
Q psy8850 117 KP---KNNGLITLSQLEEKICS---DTILVSVMLVN-NEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDI-----NI 184 (397)
Q Consensus 117 ~~---~~~~~~d~~~l~~~i~~---~~~~v~~~~~~-~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~-----~~ 184 (397)
+. ++++.+|+++++++|++ +..++++.+++ +++|...|+++|+++|++||+++|+|++|+.+.... ..
T Consensus 179 d~~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~~~~~~~~g 258 (444)
T TIGR03531 179 ETVLDGDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNKYMELINKA 258 (444)
T ss_pred eeeecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChhhhhhhhcc
Confidence 95 35678999999999986 34455554443 445688999999999999999999999999755321 11
Q ss_pred Ccc-cccEEEecccc-ccCCCCceEEEEecC-CCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHH
Q psy8850 185 QNY-KVDLMSFSAHK-IYGPKGIGALYIRRN-PRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKR 261 (397)
Q Consensus 185 ~~~-~~d~~~~s~~K-~~g~~g~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~ 261 (397)
... .+|++++|+|| +..|.+.|+++.+++ ....+.....+. ..+.....+...++....++++++.++
T Consensus 259 ~~~Grad~vv~s~hK~l~~pg~Gg~I~~~d~el~~~i~~~y~g~---------~~~s~~~~~~~~ll~~G~~g~~~li~~ 329 (444)
T TIGR03531 259 IKVGRVDAVVSSTDKNFMVPVGGAIIYSFDENFIQEISKSYPGR---------ASASPSLDVLITLLSLGSKGYLELLKE 329 (444)
T ss_pred ccccCCCeEEEeCccCCCCCCCEEEEEECCHHHHHHHHHhccCC---------CCChHHHHHHHHHHHhCHHHHHHHHHH
Confidence 112 36999999999 555655666667433 333333322110 112233333444555556788999999
Q ss_pred HHHHHHHHHHHHhhhcC---cEEEeCCCCCCCCceEEEEec---CCChHHHHHHhC-----C-cEecccCccCCCCCChh
Q psy8850 262 ILFLQKRLYNGLMESIE---EIYINGDMNNRIPHNLNISFN---FIEGESLLMAIK-----D-IAVSSGSACTSASLEPS 329 (397)
Q Consensus 262 ~~~~~~~l~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~-----~-i~~~~g~~~~~~~~~~~ 329 (397)
..++++++.+.|.+ +. |..+...+.+... +.+.+. +.+...+...|. | ..+.+|..-.- ..
T Consensus 330 ~~~~a~~l~~~L~~-l~~~~~~~~~~~~~n~is--~~~~~~~~~~~~~~~~g~~l~~~~v~g~r~v~~~~~~~~----~~ 402 (444)
T TIGR03531 330 RKEMYKYLKELLQK-LAERHGERLLDTPENPIS--SAMTLSTLKGKDPTMLGSMLYSRRVTGPRVVTNGDSKTV----GG 402 (444)
T ss_pred HHHHHHHHHHHHHH-HHHhhCcEeecCCCCcee--EEEecccccccCHHHHHHHHHhCCCCCceeecCCCceEE----CC
Confidence 99999999998877 42 3455544333322 233333 334556666663 2 12333321000 01
Q ss_pred hHHHhhCCC-ccccCceEEEeeCCCCCHHHHHHHHHHHHHH
Q psy8850 330 YVLRALGCN-DELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (397)
Q Consensus 330 ~~~~~~g~~-~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 369 (397)
..+..+|.. ..+...++-+....-++.+|||.++++|.++
T Consensus 403 ~~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~ 443 (444)
T TIGR03531 403 CEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKS 443 (444)
T ss_pred EEeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhc
Confidence 122233322 2223457777777778999999999999876
No 268
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.91 E-value=2.4e-21 Score=182.31 Aligned_cols=318 Identities=15% Similarity=0.197 Sum_probs=202.9
Q ss_pred CCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhc--
Q psy8850 6 TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYK-- 83 (397)
Q Consensus 6 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~-- 83 (397)
.+..+|.|.+++.+++...... .. . ...+...++.+.|+++.+. +.++|++||++|++.+++.+.....
T Consensus 49 lGh~~p~v~~a~~~~~~~~~~~-~~-~-----~~~~~~~~la~~L~~~~~~--~~~~f~~SGseA~e~Alk~ar~~~~~~ 119 (397)
T TIGR03246 49 LGHAHPELVKALIEQADKLWHI-GN-G-----YTNEPVLRLAKKLVDATFA--DKVFFCNSGAEANEAALKLARRYALDK 119 (397)
T ss_pred CCCCCHHHHHHHHHHHHhcccc-cC-c-----cCCHHHHHHHHHHHhhCCC--CEEEEeCCcHHHHHHHHHHHHHHHHhc
Confidence 4456899999999998763211 10 1 1133467889999998764 4899999999999999997643321
Q ss_pred --cCCCEEEEcCCCC-hhhHHHHHHHhhC---------CcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccc
Q psy8850 84 --KRGKHIITVQTEH-KSVLDSIRKLEND---------GFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGV 151 (397)
Q Consensus 84 --~~g~~vl~~~~~~-~s~~~~~~~~~~~---------g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~ 151 (397)
..+++|+..+..| .++..++...... ...+..+|.+ |++++++++.+++++|+++.++++.|.
T Consensus 120 ~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~~~aavi~Epi~~~~G~ 194 (397)
T TIGR03246 120 HGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPYN-----DLAAAKALISDKTCAVIVEPIQGEGGV 194 (397)
T ss_pred CCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCCC-----CHHHHHHHhccCeEEEEEecccCCCCC
Confidence 1234565555544 4444333322100 0123334433 899999999889999999988888886
Q ss_pred ccc----HHHHHHHHHhcCcEEEEecccc-cCcc----ccccCcccccEEEecccc-ccCCCCceEEEEecCCCCccccc
Q psy8850 152 IQP----ILEIGELCRSKGVIFHCDAAQA-VGKI----DINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEAQ 221 (397)
Q Consensus 152 ~~~----l~~i~~l~~~~gi~livD~a~~-~~~~----~~~~~~~~~d~~~~s~~K-~~g~~g~g~~~~~~~~~~~~~~~ 221 (397)
+.| +++|.++|++||+++|+|++|. +|.. ........+|++++ +| +.|+..+|+++++++....+...
T Consensus 195 ~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~a~~~~gv~pDi~t~--~K~lggG~pigav~~~~~i~~~~~~~ 272 (397)
T TIGR03246 195 VPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDILTS--AKALGGGFPIGAMLTTTEIAAHLKVG 272 (397)
T ss_pred cCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccchhhhhcCCCCCEEEe--ehhhhCCcceeEEEEcHHHHHhccCC
Confidence 653 7999999999999999999984 2211 11112235788765 59 54434479988887665544322
Q ss_pred cccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCc-EEEeCCCCCCCCceEEEEecC
Q psy8850 222 IHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEE-IYINGDMNNRIPHNLNISFNF 300 (397)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 300 (397)
.. ....+ .+....++..++++.+.+ +++.++++++.+++++.|++ +.. ..++... ...+.++.+.+..
T Consensus 273 ~~------~~t~~-~~p~~~aaa~a~l~~~~~--~~l~~~~~~~~~~l~~~L~~-l~~~~~~~~~v-rg~G~~~~i~~~~ 341 (397)
T TIGR03246 273 TH------GTTYG-GNPLACAVAGKVLDLVNT--PELLAGVKQRHDLFVDGLEK-INARYNVFSEI-RGKGLLIGAVLTE 341 (397)
T ss_pred Cc------CCCCC-CCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHH-HHhcCCCeEee-ecCceEEEEEEcC
Confidence 11 12223 233445555577877643 56788888899999998887 421 1111111 1113444454432
Q ss_pred ---CChHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHH
Q psy8850 301 ---IEGESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 301 ---~~~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 373 (397)
.....+...|. |+.+.+. +.+.+|++++..+++++|++++++|.+++.++
T Consensus 342 ~~~~~~~~~~~~l~~~Gv~~~~~-----------------------g~~~lR~~p~~~~t~~~i~~~~~~l~~~l~~~ 396 (397)
T TIGR03246 342 AYQGKAKQFVNAAAEEGVIALIA-----------------------GPNVVRFAPSLVISDDDIDEGLARFERAIEQV 396 (397)
T ss_pred chhhHHHHHHHHHHHCCeEEeec-----------------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 12445655554 6665431 12789999999999999999999999988653
No 269
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.91 E-value=9.6e-23 Score=186.05 Aligned_cols=330 Identities=19% Similarity=0.235 Sum_probs=207.9
Q ss_pred CCCCCCCHHHHHHHHHHHhhcc--CCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCc---EEEeCChhHHHHHHHHHh
Q psy8850 4 SATTPIDPRVVDKMIPYLRVQF--GNPASRNHIYGWTAEKAIEKARNEVAQLIYADPRE---IIWTSGATESNNLAIKGA 78 (397)
Q Consensus 4 ~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~---i~~~~g~t~a~~~~l~~l 78 (397)
+|...+++.+++++...+...+ +.|....|.......+...-+.+.++++|++++++ -+=..||+.|+.+++.++
T Consensus 27 aSEN~~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~~~~~w~anvqp~SGs~An~av~~aL 106 (399)
T PF00464_consen 27 ASENYMSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFGAEPKEWYANVQPHSGSQANLAVYMAL 106 (399)
T ss_dssp TT-----HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT-STTTEEEE---SSHHHHHHHHHHHH
T ss_pred CcccccCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhCCCcccceEEeecCCchHHHHHHHHHH
Confidence 4556778999999988887655 35554233333333445555899999999998653 222458889999999999
Q ss_pred HhhhccCCCEEEEcCCCChhhHHHHHHHh-------hCCcEEEEeccC-CCCCCCHHHHHHHhcC-CceEEEEecccCcc
Q psy8850 79 AHFYKKRGKHIITVQTEHKSVLDSIRKLE-------NDGFRVTYLKPK-NNGLITLSQLEEKICS-DTILVSVMLVNNEI 149 (397)
Q Consensus 79 ~~~~~~~g~~vl~~~~~~~s~~~~~~~~~-------~~g~~v~~v~~~-~~~~~d~~~l~~~i~~-~~~~v~~~~~~~~t 149 (397)
+ +|||+|+..+..++++...-.... ...+++..++++ +++.+|.+++++.+.+ +|++|++....+|
T Consensus 107 l----~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~~kPklIi~G~S~y~- 181 (399)
T PF00464_consen 107 L----KPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDELEKLAKEHKPKLIICGASSYP- 181 (399)
T ss_dssp T-----TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHHHHHHHHHH--SEEEEE-SSTS-
T ss_pred H----hhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHHHHHHHhhcCCCEEEECchhcc-
Confidence 9 899999988877655543211110 014688888988 6889999999998875 8999999766544
Q ss_pred cccccHHHHHHHHHhcCcEEEEecccccCc-----cccccCcccccEEEecccc-ccCCCCceEEEEe------------
Q psy8850 150 GVIQPILEIGELCRSKGVIFHCDAAQAVGK-----IDINIQNYKVDLMSFSAHK-IYGPKGIGALYIR------------ 211 (397)
Q Consensus 150 G~~~~l~~i~~l~~~~gi~livD~a~~~~~-----~~~~~~~~~~d~~~~s~~K-~~g~~g~g~~~~~------------ 211 (397)
...|++++.++|++.|++|++|.+|-.|. .+-.+. .+|++++|.|| +.||.| |+++.+
T Consensus 182 -~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~--~ADvvt~sThKtl~GPrg-giI~~~~~~~~~~~~~~~ 257 (399)
T PF00464_consen 182 -RPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFP--YADVVTGSTHKTLRGPRG-GIILTNKGSKNVDKKGKE 257 (399)
T ss_dssp -S---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCC--TSSEEEEESSGGG-SSS--EEEEES-SEEEE-TTS-E
T ss_pred -CccCHHHHHHHHHhcCcEEEecccccccceehheecCccc--cceEEEeeccccccccCc-eEEEEcCCccccCCcccc
Confidence 56789999999999999999999997433 332333 48999999999 999986 999988
Q ss_pred --cCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCC
Q psy8850 212 --RNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLAR-IEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNN 288 (397)
Q Consensus 212 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 288 (397)
.++.+++....+.+ ..|.+....++++..+++... ..++++.+++.++++.|.+.|.+ .|+.++.. .
T Consensus 258 ~~~~l~~~I~~avfP~------~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La~~L~~--~G~~v~~g--g 327 (399)
T PF00464_consen 258 IDEELAEKIDSAVFPG------LQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALAEALQE--RGFKVVTG--G 327 (399)
T ss_dssp EEHHHHHHHHHHHTTT------T-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH--TT-EEGGG--S
T ss_pred cHHHHHHHhccccCCC------cccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHhh--CCcEEEEC--C
Confidence 22223333333221 234567788999988888764 35789999999999999999999 79998863 3
Q ss_pred CCCceEEEEec--CCChHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCC----CCHHHHH
Q psy8850 289 RIPHNLNISFN--FIEGESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRF----TTEKEID 360 (397)
Q Consensus 289 ~~~~~~~~~~~--~~~~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~----~~~~~i~ 360 (397)
+..+++.+.+. +.+..+..+.|. ||.+..-..... ..+.....|||+.... ..++|++
T Consensus 328 Td~H~vlvd~~~~~~~g~~a~~~Le~~gI~vnkn~iP~d--------------~~~~~~sGlRlGT~~lT~rG~~e~dm~ 393 (399)
T PF00464_consen 328 TDNHQVLVDLRSFGIDGKEAEKALEEAGIIVNKNTIPGD--------------RSPFVPSGLRLGTPALTRRGMKEEDMK 393 (399)
T ss_dssp -SSSEEEEEGGGGTS-HHHHHHHHHHTTEE-EEE--TTT--------------STTTT-SEEEEESHHHHHTT--HHHHH
T ss_pred CCCCeEEEEecccccchHHHHHHHHhcCeeecccccCCC--------------CCCCCCCEEEECCHHHHhCCCCHHHHH
Confidence 44678888875 356677777775 776653211100 1112237899996432 4588888
Q ss_pred HHHHHH
Q psy8850 361 FTIKLL 366 (397)
Q Consensus 361 ~~~~~l 366 (397)
++.+.|
T Consensus 394 ~iA~~I 399 (399)
T PF00464_consen 394 EIAELI 399 (399)
T ss_dssp HHHHHH
T ss_pred HHHhhC
Confidence 877654
No 270
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.91 E-value=1.2e-21 Score=198.24 Aligned_cols=287 Identities=14% Similarity=0.109 Sum_probs=215.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHHh-hCCcEEEEecc
Q psy8850 40 EKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLE-NDGFRVTYLKP 118 (397)
Q Consensus 40 ~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~-~~g~~v~~v~~ 118 (397)
-+.+.+++..++++.|+++.++.+..++|.+.+.++.++.. ..+++++|++++.+||++...+.... ..|++++.++.
T Consensus 120 Leal~~~Qt~la~LtG~~~anaSl~d~aTAa~ea~~~a~~~-~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~ 198 (954)
T PRK05367 120 LEALLNFQTMVADLTGLEIANASLLDEATAAAEAMALAKRV-SKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDA 198 (954)
T ss_pred HHHHHHHHHHHHHHHCCChhhccccccHHHHHHHHHHhhhh-ccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecC
Confidence 35677899999999999999999999999999988887642 11124899999999999999887754 45999999997
Q ss_pred CCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCccccccCcccccEEEecccc
Q psy8850 119 KNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHK 198 (397)
Q Consensus 119 ~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~~s~~K 198 (397)
+.+ .+ .+++..+++. ..|.+|.+.|+++|+++||++|+++++|+.+.......+..++++|++++|.||
T Consensus 199 ~~d----~~------~~~~~~vlvq-~p~~~G~i~d~~~i~~~ah~~Gal~~vda~~~Al~~l~~pge~GaDi~vgs~qk 267 (954)
T PRK05367 199 AKA----LD------HDDVFGVLLQ-YPGTSGEVRDYTALIAAAHARGALVAVAADLLALTLLTPPGEMGADIAVGSAQR 267 (954)
T ss_pred ccC----CC------cccEEEEEEe-cCCCCeeeccHHHHHHHHHHcCCEEEEEehhhhccCCCChhhcCCCEEEeeCcc
Confidence 642 11 2355555444 457889999999999999999999999997754444446778899999999999
Q ss_pred c-----cCCCCceEEEEecCCCCccccccccCC-----------------ccccccCCCCchhHHHHHHHHH-----HHH
Q psy8850 199 I-----YGPKGIGALYIRRNPRTRIEAQIHGGG-----------------HEYGLRSGTLATHQIVGMGEAF-----RLA 251 (397)
Q Consensus 199 ~-----~g~~g~g~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~l~~al-----~~~ 251 (397)
| +|+++.|+++++++....+.+.+.|+. +..+++.+++|.....++.+.+ .++
T Consensus 268 fg~P~g~GGP~aGflavr~~~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRrekaTsNict~qaL~a~~a~~y~~~~ 347 (954)
T PRK05367 268 FGVPMGFGGPHAAYFAVRDAYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRREKATSNICTAQVLLAVMASMYAVYH 347 (954)
T ss_pred cCCCCCCCCCCEEEEEECHHHHhhCCCCeeeeecccCCCcccccccccccccccccccccccchHHHHHHHHHHHHHHHH
Confidence 7 444469999999887666655554431 1135667788876543333333 223
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCChHHHHHHhC--CcEecccCccCCCCCCh
Q psy8850 252 -RIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAIK--DIAVSSGSACTSASLEP 328 (397)
Q Consensus 252 -~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~i~~~~g~~~~~~~~~~ 328 (397)
..|++++.++...++.++.+.|++ .++.+..+. . ...+.+.++ .+..++.++|. ||.+..-
T Consensus 348 g~~Gl~~Ia~~~~~la~~l~~~L~~--~G~~~~~~~--~-f~~~~~~~~-~~~~~i~~~l~~~gi~~~~~---------- 411 (954)
T PRK05367 348 GPEGLKAIARRVHRLAAILAAGLRA--LGLEVVHDS--F-FDTLTVEVG-GDAAAVLARALAAGINLRRV---------- 411 (954)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHh--cCcccCCCC--C-CCeEEEeCC-CCHHHHHHHHHHCCceeccc----------
Confidence 457999999999999999999987 677766442 2 345566654 36778887776 6655211
Q ss_pred hhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHH
Q psy8850 329 SYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLK 367 (397)
Q Consensus 329 ~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~ 367 (397)
..+.+|+|+..++|++|||+++++|.
T Consensus 412 -------------~~~~l~is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 412 -------------DDDHVGISLDETTTREDLAALLAVFG 437 (954)
T ss_pred -------------cCCEEEEEecccCCHHHHHHHHHHHc
Confidence 12679999999999999999999997
No 271
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.91 E-value=3.5e-21 Score=182.01 Aligned_cols=313 Identities=15% Similarity=0.176 Sum_probs=207.0
Q ss_pred HHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhh-----hccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEe
Q psy8850 42 AIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHF-----YKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYL 116 (397)
Q Consensus 42 ~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~-----~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v 116 (397)
...++++.++++++.+ .+++++|||+|+.+++.++... ..++||+|+++.++|+++..++... |.+++.+
T Consensus 64 ~~~~fe~~lA~~~g~~--~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~---G~~pv~v 138 (438)
T PRK15407 64 FNDAFEKKLAEFLGVR--YALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQN---GLVPVFV 138 (438)
T ss_pred hHHHHHHHHHHHhCCC--eEEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHc---CCEEEEE
Confidence 4678999999999986 6899999999999998876311 1268999999999999999888776 9999999
Q ss_pred ccC-CCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCccccc--cCcccccEEE
Q psy8850 117 KPK-NNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDIN--IQNYKVDLMS 193 (397)
Q Consensus 117 ~~~-~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~--~~~~~~d~~~ 193 (397)
+++ .++.+|++++++++++++++|+++++ .|...++++|.++|+++|++||+|++|+.|...-+ ...+ -|+.+
T Consensus 139 dvd~~~~~id~~~le~~i~~~tkaVi~~~~---~G~p~dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~~~G~~-gd~~~ 214 (438)
T PRK15407 139 DVELPTYNIDASLLEAAVSPKTKAIMIAHT---LGNPFDLAAVKAFCDKHNLWLIEDNCDALGSTYDGRMTGTF-GDIAT 214 (438)
T ss_pred ecCCCcCCcCHHHHHHHcCcCCeEEEEeCC---CCChhhHHHHHHHHHHCCCEEEEECccchhhhcCCeeeecc-CceEE
Confidence 987 57789999999999999999999875 68888999999999999999999999998876433 1122 27788
Q ss_pred eccc--c-ccCCCCceEEEEecCCCCccccccccCCcc---------------------------ccc---cCCCCchhH
Q psy8850 194 FSAH--K-IYGPKGIGALYIRRNPRTRIEAQIHGGGHE---------------------------YGL---RSGTLATHQ 240 (397)
Q Consensus 194 ~s~~--K-~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~---~~~~~~~~~ 240 (397)
+||+ | +..+.| |+++.+++........+.+.+.. ..+ ..|. | ..
T Consensus 215 fSf~~~k~~~~geG-G~l~t~d~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~-n-~r 291 (438)
T PRK15407 215 LSFYPAHHITMGEG-GAVFTNDPLLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHKYTYSHLGY-N-LK 291 (438)
T ss_pred EeCCCCCCccccCc-eEEEECCHHHHHHHHHHHHhCccccccccccccccccccccccccccccccccccccccc-c-cC
Confidence 8876 5 444444 89988866443321111111100 000 0111 1 01
Q ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhcCc-EEEeCCCCCC--CCceEEEEecC---CChHHHHHHhC--
Q psy8850 241 IVGMGEAFRLA-RIEMKEELKRILFLQKRLYNGLMESIEE-IYINGDMNNR--IPHNLNISFNF---IEGESLLMAIK-- 311 (397)
Q Consensus 241 ~~~l~~al~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~~--~~~~~~~~~~~---~~~~~~~~~l~-- 311 (397)
+-.+.+++-.. .+.++++.++.+++.+++.+.|.+ +++ +.+...+... ..+.+.+.++. .+..++.+.|.
T Consensus 292 msel~AAig~~qL~~l~~~~~~R~~~a~~y~~~L~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Rd~l~~~L~~~ 370 (438)
T PRK15407 292 ITDMQAAIGLAQLEKLPGFIEARKANFAYLKEGLAS-LEDFLILPEATPNSDPSWFGFPITVKEDAGFTRVELVKYLEEN 370 (438)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCccccCcCCCCCeeEEEEEEEEECCcCCCCHHHHHHHHHHC
Confidence 11122222222 224667778888888899999987 664 3222222221 12234444442 34678888887
Q ss_pred CcEecccCccC-CCCCChhhHHHhhCC--------CccccCceEEEeeCCCCCHHHHHHHHHHHHHHHH
Q psy8850 312 DIAVSSGSACT-SASLEPSYVLRALGC--------NDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVK 371 (397)
Q Consensus 312 ~i~~~~g~~~~-~~~~~~~~~~~~~g~--------~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 371 (397)
||..... +. +.... ..++..+. ........|-+.+....+++|+++++++|++++.
T Consensus 371 GI~~~~~--~~~~~~~~--p~~~~~~~~~~~~~P~ae~~~~~~l~LP~~~~l~~~~v~~i~~~i~~~~~ 435 (438)
T PRK15407 371 KIGTRLL--FAGNLTRQ--PYFKGVKYRVVGELTNTDRIMNDTFWIGVYPGLTEEMLDYVIEKIEEFFG 435 (438)
T ss_pred CCCcccc--CCCccccC--hhhhhcCCCCCCCChHHHHHHhCeEEecCCCCCCHHHHHHHHHHHHHHHh
Confidence 6654432 21 21111 12222111 1122356788888877899999999999999874
No 272
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.90 E-value=1.1e-21 Score=165.54 Aligned_cols=312 Identities=16% Similarity=0.081 Sum_probs=196.2
Q ss_pred HHHHHHHHHHHHHHhCC--CCCcEEEeCChhHHHHHHHHHhHhhhccC--CCEEEEcCCCChhhHHHHHHHhhCCcEEEE
Q psy8850 40 EKAIEKARNEVAQLIYA--DPREIIWTSGATESNNLAIKGAAHFYKKR--GKHIITVQTEHKSVLDSIRKLENDGFRVTY 115 (397)
Q Consensus 40 ~~~~~~~~~~la~~~~~--~~~~i~~~~g~t~a~~~~l~~l~~~~~~~--g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~ 115 (397)
...++.+.+.+.+.+|. .+++|.+|+|++.|...+...+...+... +..++=..|+|-++..+.-. +--.+.
T Consensus 77 ~~li~ala~~l~~~ygwnit~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~----~d~fVs 152 (417)
T COG3977 77 AVLIDALAKMLRREYGWNITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLE----EDLFVS 152 (417)
T ss_pred hHHHHHHHHHHHHHhCCCCccceeeecCCccchHHHHHHHhcCccCCCcceeEeeccChhhccccccccC----ccceee
Confidence 45677778888888875 56689999999999998888776544221 22344456667666533110 111222
Q ss_pred ecc----CC----CCCCCHHHHHHHhcCCceEEEEecccCccccccc---HHHHHHHHHhcCcEEEEecccccCcccccc
Q psy8850 116 LKP----KN----NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---ILEIGELCRSKGVIFHCDAAQAVGKIDINI 184 (397)
Q Consensus 116 v~~----~~----~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~---l~~i~~l~~~~gi~livD~a~~~~~~~~~~ 184 (397)
+.. .+ ..++|.++++ +.+.+.+||++-|.||||.+.. +.++.++|++||+++++|.+|+.+...+.+
T Consensus 153 ~kP~iel~~~g~FKY~vDF~~l~--i~e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~iif 230 (417)
T COG3977 153 AKPNIELLPAGQFKYHVDFEHLH--IGESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGIIF 230 (417)
T ss_pred ccCCcccccccceeeccCHHHcc--cccccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCceec
Confidence 211 12 2367777774 5688999999999999999877 456778899999999999999976643333
Q ss_pred Ccc-----cccEEEeccccccCCC-CceEEEEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHH
Q psy8850 185 QNY-----KVDLMSFSAHKIYGPK-GIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEE 258 (397)
Q Consensus 185 ~~~-----~~d~~~~s~~K~~g~~-g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~ 258 (397)
.+. ..-+.|+|++|++-|. .+|+++.+.+....+... +......++.........+...=++.+-.-.-+
T Consensus 231 sd~~~~w~~NiilC~SLSK~GLPG~R~GIiIane~viqaitnm----n~iisLap~~~G~Aia~~mie~gdl~rlseqVI 306 (417)
T COG3977 231 SDATPLWNENIILCMSLSKLGLPGSRCGIIIANEKVIQAITNM----NGIISLAPGRMGPAIAAEMIESGDLLRLSEQVI 306 (417)
T ss_pred ccccccCCCCEEEEeehhhcCCCCcceeEEEccHHHHHHHHhc----cceeeecCCCccHHHHHHHhhcchHHHHHHHhh
Confidence 322 4568899999954432 389999987654443321 111112222222222222211111111111223
Q ss_pred HHHHHHHHHHHHHHHhhhcCc--EEEeCCCCCCCCceEEEEecC--CChHHHHHHhC--CcEecccCccCCCCCChhhHH
Q psy8850 259 LKRILFLQKRLYNGLMESIEE--IYINGDMNNRIPHNLNISFNF--IEGESLLMAIK--DIAVSSGSACTSASLEPSYVL 332 (397)
Q Consensus 259 ~~~~~~~~~~l~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~ 332 (397)
+-.++++.+...+.|+.+++. +.+..+++ ..++|++|.+ ++..+++++|+ |+.+.||..|.+|-.
T Consensus 307 rPFY~~~~q~~~~~l~~~lp~~~~~iHkpEG---AIFlWLWf~dLPItt~~LYq~LKa~Gvl~VPG~~FFpGl~------ 377 (417)
T COG3977 307 RPFYRNRVQTTIAILRRYLPEYRCLIHKPEG---AIFLWLWFKDLPITTEELYQRLKARGVLMVPGHYFFPGLD------ 377 (417)
T ss_pred hHHHHHHHHHHHHHHHHhcCccceeeecCCc---ceeehhhhccCCCCHHHHHHHHHhCeEEEecccccCCCCC------
Confidence 344444444444444444443 34455554 4566777764 56889999998 999999999988421
Q ss_pred HhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHHHhc
Q psy8850 333 RALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKLREL 376 (397)
Q Consensus 333 ~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~ 376 (397)
.+.+..+.++|++... +++.|++.+.+|.+.++++-+.
T Consensus 378 ----~ewpH~hqC~Rmn~~~--~~~~ie~Gva~lae~ve~~yq~ 415 (417)
T COG3977 378 ----KEWPHTHQCMRMNYVP--EPEKIEKGVAILAEEVERAYQE 415 (417)
T ss_pred ----CCCCCccceEEEecCC--CHHHHHHHHHHHHHHHHHHHhc
Confidence 1223356899999986 7999999999999988876543
No 273
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.90 E-value=1e-21 Score=181.73 Aligned_cols=303 Identities=17% Similarity=0.137 Sum_probs=199.6
Q ss_pred cchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHH-HhhCCc
Q psy8850 33 HIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRK-LENDGF 111 (397)
Q Consensus 33 ~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~-~~~~g~ 111 (397)
+.+++...+...++++.++++.|.+ ..+.++||+.|+.+++.++. ++||+|+++...|..+...... +...|+
T Consensus 56 ~~Y~r~~~P~~~~lE~~la~leg~~--~av~~sSG~aAi~~al~all----~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi 129 (384)
T PRK06434 56 YIYTRWGNPTVQAFEEKYAVLENAE--HALSFSSGMGAITSAILSLI----KKGKRILSISDLYGQTFYFFNKVLKTLGI 129 (384)
T ss_pred cceeCCCChhHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHHh----CCCCEEEEecCccchHHHHHHHHHHhcCc
Confidence 3444455678899999999999986 57888999999999999887 8999999998888777766633 444599
Q ss_pred EEEEeccCCCCCCCHHHHHHHhc-CCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCccccccCccccc
Q psy8850 112 RVTYLKPKNNGLITLSQLEEKIC-SDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVD 190 (397)
Q Consensus 112 ~v~~v~~~~~~~~d~~~l~~~i~-~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d 190 (397)
+++++++++...++ +. +++++|+++++.||++.+.|+++|.++||+++ +++|++++.+.... ....++|
T Consensus 130 ~v~fvd~~~~~~~~-------l~~~~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD~t~~s~~~~~-pl~~gaD 199 (384)
T PRK06434 130 HVDYIDTDRLNSLD-------FDPSNYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVDATFASPYNQN-PLDLGAD 199 (384)
T ss_pred EEEEECCCChhhee-------ecCCCeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEECCCCCcccCC-chhcCCC
Confidence 99999987432222 22 37899999999999999999999999999998 56799987554321 2235899
Q ss_pred EEEecccc-ccCCCC--ceEEEEecC-CCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8850 191 LMSFSAHK-IYGPKG--IGALYIRRN-PRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQ 266 (397)
Q Consensus 191 ~~~~s~~K-~~g~~g--~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~ 266 (397)
++++|.+| +.|+.+ .|+++.+++ ..+++....... ....+....+-+...+ +.++.+.++..+++
T Consensus 200 ivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~~~~-------G~~~~~~~A~l~~~gL----~tL~~R~~r~~~~a 268 (384)
T PRK06434 200 VVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERRKTL-------GSNPDPIQAYLALRGL----KTLGLRMEKHNKNG 268 (384)
T ss_pred EEEeecccccCCCCCceEEEEecCcHHHHHHHHHHHHhc-------CCCCCHHHHHHHHhCC----CcHHHHHHHHHHHH
Confidence 99999999 555443 466666543 222222111010 0111211111111112 24667788889999
Q ss_pred HHHHHHHhhhcCcEEEeCCCC--------CCCCceEEEEecCC-ChHHHHHHhC--CcEecccCccCC----CCCCh---
Q psy8850 267 KRLYNGLMESIEEIYINGDMN--------NRIPHNLNISFNFI-EGESLLMAIK--DIAVSSGSACTS----ASLEP--- 328 (397)
Q Consensus 267 ~~l~~~l~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~-~~~~~~~~l~--~i~~~~g~~~~~----~~~~~--- 328 (397)
..+.+.|++ .|.+..+.-|+ ...++++.|.+++. ...++.+.|+ .+..+-|...+. ..+.+
T Consensus 269 ~~~a~~L~~-~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~~~~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~h~~~ 347 (384)
T PRK06434 269 MELARFLRD-SKKISNVYYPDTEIGKKVLRGFGGMLSFELRSMEDVHKFIRNLEIPMVAASLGGVESLITLPVETSHSSL 347 (384)
T ss_pred HHHHHHHHc-CCCccEEECCChHHHHHhcCCCCceEEEEECCHHHHHHHHHhCCcceEccCCCCCCeeeECCCccccccC
Confidence 999999998 77664332222 23467888888642 1335555555 344444543322 12111
Q ss_pred -hhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHH
Q psy8850 329 -SYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVK 371 (397)
Q Consensus 329 -~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 371 (397)
....+..|+.+ +.||||++. |+++.+++.|.+++.
T Consensus 348 ~~e~~~~~gi~~----~liRlsvGl----Ed~~dLi~dl~~Al~ 383 (384)
T PRK06434 348 SPEERERLGISD----NLVRFSIGI----EDIDDLIKDIENALS 383 (384)
T ss_pred CHHHHHhcCCCc----CeEEEEeCc----CCHHHHHHHHHHHhc
Confidence 12234566654 899999997 667777777777653
No 274
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.90 E-value=3.2e-21 Score=182.84 Aligned_cols=331 Identities=14% Similarity=0.126 Sum_probs=207.8
Q ss_pred CCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhc--
Q psy8850 6 TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYK-- 83 (397)
Q Consensus 6 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~-- 83 (397)
.+..+|.+.+++++++..... .. ..+ ...+...++.+.|++++....+.+.|++||++|++.+++....++.
T Consensus 56 lGh~~p~v~~ai~~q~~~~~~-~~----~~~-~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~A~klar~~~~~~ 129 (423)
T PRK05964 56 HGHNHPYIDQAIREQLDRLDH-VI----FAG-FTHEPAERLAQRLVALTPGGLDHVFFSDSGSVAVEVALKMALQYWRNR 129 (423)
T ss_pred CCCCCHHHHHHHHHHHhhCCC-cc----ccc-cCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhc
Confidence 346689999999999876221 00 001 1123456778888888753345799999999999999996543311
Q ss_pred --cCCCEEEEcCCCChhhHHHHHHHhhCC----------cEEEEeccCCC--CCCCHHHHHHHhc---CCceEEEEec-c
Q psy8850 84 --KRGKHIITVQTEHKSVLDSIRKLENDG----------FRVTYLKPKNN--GLITLSQLEEKIC---SDTILVSVML-V 145 (397)
Q Consensus 84 --~~g~~vl~~~~~~~s~~~~~~~~~~~g----------~~v~~v~~~~~--~~~d~~~l~~~i~---~~~~~v~~~~-~ 145 (397)
..+.+|+....+|++.......+...+ ..+..++...+ ...+++++++.+. +++.+|+++. +
T Consensus 130 ~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~~~~iaavi~Ep~i 209 (423)
T PRK05964 130 GEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEALLEKHAGEIAAFIVEPLV 209 (423)
T ss_pred CCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHHHHHHHhCCCcEEEEEEeccc
Confidence 134677777777777654443322110 11233343311 1122788888884 4577888887 5
Q ss_pred cCccccccc----HHHHHHHHHhcCcEEEEecccc-cCcc----ccccCcccccEEEecccc-ccCC-CCceEEEEecCC
Q psy8850 146 NNEIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKI----DINIQNYKVDLMSFSAHK-IYGP-KGIGALYIRRNP 214 (397)
Q Consensus 146 ~~~tG~~~~----l~~i~~l~~~~gi~livD~a~~-~~~~----~~~~~~~~~d~~~~s~~K-~~g~-~g~g~~~~~~~~ 214 (397)
++.+|...+ +++|.++|++||+++|+|+++. +|.. ..+.....+|++++| | +.|+ .++|+++.+++.
T Consensus 210 ~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~v~pDi~~~~--K~l~gG~~p~~av~~~~~i 287 (423)
T PRK05964 210 QGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLFACEQAGVSPDIMCLS--KGLTGGYLPLAATLCTAEI 287 (423)
T ss_pred ccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhHHHhcCCCCCeeeee--hhhhcCcccceEEEEcHHH
Confidence 888888775 7899999999999999999986 3221 112233468887766 9 5444 458888888766
Q ss_pred CCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceE
Q psy8850 215 RTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNL 294 (397)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 294 (397)
.+.+............... ..+...+++..++++.+.+ ..+.++..++.+++++.|++ +.....+.+ ....+.++
T Consensus 288 ~~~~~~~~~~~~~~~~~T~-~~np~~~aaa~a~l~~l~~--~~~~~~~~~~g~~l~~~l~~-l~~~~~i~~-vrg~Gl~~ 362 (423)
T PRK05964 288 FEAFYSDDRAKAFMHSPSY-TANPLACAAANASLDLFED--EPVLERVAALSAGLAEGLEP-FRDLPGVAD-VRVLGAIG 362 (423)
T ss_pred HHhhhcCCcccccccCCCC-CcCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHh-hccCCCeEE-eecccEEE
Confidence 5544321000000001111 2455667777788887764 35677888888888888877 433222211 11124555
Q ss_pred EEEecCCC----hHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHH
Q psy8850 295 NISFNFIE----GESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 368 (397)
Q Consensus 295 ~~~~~~~~----~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~ 368 (397)
.+.+.+.+ ...+...|. |+.+.+. ++.+|++++..+|++|||+++++|++
T Consensus 363 ~i~l~~~~~~~~~~~l~~~l~~~Gv~v~~~------------------------~~~lR~~p~l~~t~edId~~v~~l~~ 418 (423)
T PRK05964 363 AVELDRPVLERDGPALRAFALERGVLLRPL------------------------GNTIYLMPPYIITAEELDRITDAIVE 418 (423)
T ss_pred EEEeccCcchhHHHHHHHHHHHCCeEEEec------------------------CCEEEEeCCcccCHHHHHHHHHHHHH
Confidence 66665432 345555554 6666532 26799999999999999999999999
Q ss_pred HHHHH
Q psy8850 369 KVKKL 373 (397)
Q Consensus 369 ~~~~~ 373 (397)
+++++
T Consensus 419 al~~~ 423 (423)
T PRK05964 419 VADEL 423 (423)
T ss_pred HHhhC
Confidence 98763
No 275
>PLN00144 acetylornithine transaminase
Probab=99.90 E-value=1.1e-20 Score=176.32 Aligned_cols=316 Identities=16% Similarity=0.164 Sum_probs=201.0
Q ss_pred CCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhcc-
Q psy8850 6 TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKK- 84 (397)
Q Consensus 6 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~- 84 (397)
.+..+|++.+++.+++.... .... ....+...++.+.|++..+ .+.++|++||++|++.+++.......+
T Consensus 29 lGh~~p~v~~ai~~q~~~~~-~~~~------~~~~~~~~~la~~l~~~~~--~~~v~f~~sGseA~e~AlklAr~~~~~~ 99 (382)
T PLN00144 29 LGHGDPDWVKAVAEQAGTLA-HVSN------VYHTIPQVELAKRLVASSF--ADRVFFCNSGTEANEAAIKFARKYQRVR 99 (382)
T ss_pred CCCCCHHHHHHHHHHHHhcC-Cccc------cccCHHHHHHHHHHHhcCC--CCeEEEeCCcHHHHHHHHHHHHHHHhcc
Confidence 34678999999999998622 1111 0112345567777777654 358999999999999999965433211
Q ss_pred ----C------CCEEEEcCCCChhhHHHHHHHhhC-Cc---------EEEEeccCCCCCCCHHHHHHHhc-CCceEEEEe
Q psy8850 85 ----R------GKHIITVQTEHKSVLDSIRKLEND-GF---------RVTYLKPKNNGLITLSQLEEKIC-SDTILVSVM 143 (397)
Q Consensus 85 ----~------g~~vl~~~~~~~s~~~~~~~~~~~-g~---------~v~~v~~~~~~~~d~~~l~~~i~-~~~~~v~~~ 143 (397)
+ +.+|+....+|++.......+... .. .+..+|.+ |++.+++.+. .++++|+++
T Consensus 100 ~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~~~~~~~aavi~e 174 (382)
T PLN00144 100 APDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYG-----NLEAARKLIQKGKTAAVFVE 174 (382)
T ss_pred CCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCC-----CHHHHHHhcCCCCeEEEEEc
Confidence 0 356777676666655433332110 00 12333332 7899998885 468899999
Q ss_pred cccCccccccc----HHHHHHHHHhcCcEEEEeccccc-Ccc----ccccCcccccEEEecccc-ccCCCCceEEEEecC
Q psy8850 144 LVNNEIGVIQP----ILEIGELCRSKGVIFHCDAAQAV-GKI----DINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRN 213 (397)
Q Consensus 144 ~~~~~tG~~~~----l~~i~~l~~~~gi~livD~a~~~-~~~----~~~~~~~~~d~~~~s~~K-~~g~~g~g~~~~~~~ 213 (397)
..+||.|...+ +++|.++|++||+++|+|++++. +.. +.+...+.+|++++| | +.++..+|+++++++
T Consensus 175 P~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~PDi~t~s--K~l~~G~pig~v~~~~~ 252 (382)
T PLN00144 175 PVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEPDIMTLA--KPLAGGLPIGAVLVTEK 252 (382)
T ss_pred cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCCCCCEEEec--ccccCCcceEEEEEcHH
Confidence 99999665443 68999999999999999999872 221 112344568866665 9 554445899999877
Q ss_pred CCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---cCcEEEeCCCCCCC
Q psy8850 214 PRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMES---IEEIYINGDMNNRI 290 (397)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~~~~~~~~ 290 (397)
..+.+.+...+ ... ..+....++..++++++.+ .++.+++.++.+++++.|.+. .+.+.-+. . .
T Consensus 253 ~~~~~~~~~~~------~T~-~~~pl~~aaa~a~l~~i~~--~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~vr--g--~ 319 (382)
T PLN00144 253 VASAINPGDHG------STF-AGGPLVCNAALAVLDKISK--PGFLASVAKKGEYLRELLRRKLGGNPHVKEVR--G--V 319 (382)
T ss_pred HHhccCCCCCC------CCC-CCCHHHHHHHHHHHHHHhh--chHHHHHHHHHHHHHHHHHHHHhhCCCceeee--c--C
Confidence 66665432211 122 2344555666678888865 344455555555555554431 23221111 1 2
Q ss_pred CceEEEEecCCChHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHH
Q psy8850 291 PHNLNISFNFIEGESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 368 (397)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~ 368 (397)
+.++++.+. .+...+...+. |+.+.++. .++.||++++..++++++++++++|.+
T Consensus 320 G~~~~l~l~-~~~~~~~~~~~~~Gv~i~~~~----------------------~~~~lrl~p~~~~~~~~i~~~~~~l~~ 376 (382)
T PLN00144 320 GLLVGIQLD-VPAGPLVDACRDSGLLVLTAG----------------------KGDVVRLVPPLVISEAELEQAVEILAD 376 (382)
T ss_pred ceEEEEEec-CccHHHHHHHHHCCeEEeecC----------------------CCCEEEEeCCCccCHHHHHHHHHHHHH
Confidence 566777773 34456666654 88776541 027899999988899999999999999
Q ss_pred HHHHH
Q psy8850 369 KVKKL 373 (397)
Q Consensus 369 ~~~~~ 373 (397)
++.++
T Consensus 377 ~l~~~ 381 (382)
T PLN00144 377 CLPAL 381 (382)
T ss_pred HHHhc
Confidence 98653
No 276
>KOG0053|consensus
Probab=99.89 E-value=6.6e-22 Score=177.29 Aligned_cols=309 Identities=15% Similarity=0.108 Sum_probs=209.1
Q ss_pred cchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHHhhC-Cc
Q psy8850 33 HIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLEND-GF 111 (397)
Q Consensus 33 ~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~-g~ 111 (397)
+.+++...+....++..++++.|++ ..+..+||..|+..++..+. +.|++|+.....|..+...+...... |+
T Consensus 69 ~~Ysr~~nPt~~~le~~iaal~ga~--~~l~fsSGmaA~~~al~~L~----~~g~~iV~~~~~Y~gT~~~l~~~~~~~gi 142 (409)
T KOG0053|consen 69 YDYSRSGNPTRDVLESGIAALEGAA--HALLFSSGMAAITVALLHLL----PAGDHIVATGDVYGGTLRILRKFLPKFGG 142 (409)
T ss_pred cccccCCCCchHHHHHHHHHHhCCc--eEEEecccHHHHHHHHHHhc----CCCCcEEEeCCCcccHHHHHHHHHHHhCc
Confidence 4444555567888999999999988 57888888889999999888 78999999999999999988876554 99
Q ss_pred EEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCccccccCcccccE
Q psy8850 112 RVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDL 191 (397)
Q Consensus 112 ~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~ 191 (397)
+...++.+ +++++++++++++++|++++|.||+..+.|++++.++||++|+.|+||++.+.+. -.+...+++|+
T Consensus 143 e~~~vd~~-----~~~~~~~~i~~~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf~~p~-~~~pL~lGADI 216 (409)
T KOG0053|consen 143 EGDFVDVD-----DLKKILKAIKENTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTFGSPY-NQDPLPLGADI 216 (409)
T ss_pred eeeeechh-----hHHHHHHhhccCceEEEEECCCCCccccccHHHHHHHHhhCCCEEEEeCCcCccc-ccChhhcCCCE
Confidence 99988877 7999999999999999999999999999999999999999999999999987663 23444568999
Q ss_pred EEeccccccCCCC---ceEEEEe-cCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8850 192 MSFSAHKIYGPKG---IGALYIR-RNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQK 267 (397)
Q Consensus 192 ~~~s~~K~~g~~g---~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~ 267 (397)
++.|.+|++|+.. .|.++.+ .+...++..... ...+.++.....-+...++.+ .-+.++..+++.
T Consensus 217 V~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~~-------~lg~~~~p~~~~ll~Rglktl----~lRi~~~~ena~ 285 (409)
T KOG0053|consen 217 VVHSATKYIGGHSDVIGGSVVLNSEELASRLKFLQE-------DLGWCEDPFDLFLLSRGLKTL----HLRINKHSENAL 285 (409)
T ss_pred EEEeeeeeecCCcceeeeEEecCcHHHHHHHHHHHH-------HhcCCCCHHHHHHHhcCcchh----hhhHHHHHHHHH
Confidence 9999999655443 4777775 333333322211 111234433333332333222 223444455555
Q ss_pred HHHHHHhhhcCcEEEeCCC--------------CCCCCceEEEE-ecC-CChHHHHHHhC--CcEecccCccCCCC----
Q psy8850 268 RLYNGLMESIEEIYINGDM--------------NNRIPHNLNIS-FNF-IEGESLLMAIK--DIAVSSGSACTSAS---- 325 (397)
Q Consensus 268 ~l~~~l~~~~~~~~~~~~~--------------~~~~~~~~~~~-~~~-~~~~~~~~~l~--~i~~~~g~~~~~~~---- 325 (397)
.+.+.|++ .+.++.+--+ .....+.+.+. +-. ..+.++...|+ ....+-|..++..+
T Consensus 286 ~~A~~Le~-~~~v~kv~YPgL~Shp~h~~~~~~~~g~~G~l~~~~~~~~~~a~kf~~~LK~~~~a~SlG~~eSL~~~p~~ 364 (409)
T KOG0053|consen 286 KIALLLEA-HPKVKKVYYPGLPSHPNHELAKRQKKGGYGGLSSVIFGNEEHAKKFYDALKLFTKAPSLGGNESLAEPPAI 364 (409)
T ss_pred HHHHHhhh-CCceeEEEcCCCCCCccHHHHHhhhcCCcceEEEEEcCCHHHHHHHHHhhhhhhcccCcCccchhhcchhh
Confidence 56666666 4555422111 11112222222 221 23456777776 35555555443311
Q ss_pred C---ChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHH
Q psy8850 326 L---EPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 326 ~---~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 373 (397)
+ .+.......|+++ +.||+|++. |++|.++..+.++++.+
T Consensus 365 mth~~~~e~~~~~Gi~~----~LVRvSVGi----Ed~~dL~~d~~~Al~~~ 407 (409)
T KOG0053|consen 365 MTHASELEEREKFGIDP----NLVRVSVGI----EDIEDLIKDFQQALEKA 407 (409)
T ss_pred hccCCCHHHHHhcCCCC----CcEEEEecc----CCHHHHHHHHHHHHHhh
Confidence 1 1223344666665 899999995 77888888888877654
No 277
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.89 E-value=1.4e-20 Score=177.91 Aligned_cols=318 Identities=17% Similarity=0.217 Sum_probs=199.1
Q ss_pred CCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhc--
Q psy8850 6 TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYK-- 83 (397)
Q Consensus 6 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~-- 83 (397)
.+..+|++.+++.+.+...... . .. +. .+...++.+.|+++.+. +.+++++||++|++.+++....+..
T Consensus 54 lGh~~p~v~~a~~~~~~~~~~~--~-~~-~~---~~~~~~l~~~l~~~~~~--~~~~~~~sGseA~e~a~klar~~~~~~ 124 (403)
T PRK05093 54 LGHCHPALVKALKEQGEKLWHI--S-NV-FT---NEPALRLAKKLIDATFA--ERVFFANSGAEANEAAFKLARRYACDR 124 (403)
T ss_pred CCCCCHHHHHHHHHHHHhcCcc--c-Cc-cC---CHHHHHHHHHHHhhCCC--CEEEEeCchHHHHHHHHHHHHHHHhhc
Confidence 3457899999999998753211 0 10 11 12345888888888754 4899999999999999996543221
Q ss_pred --cCCCEEEEcCCCChhh-HHHHHHHh---------hCCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccc
Q psy8850 84 --KRGKHIITVQTEHKSV-LDSIRKLE---------NDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGV 151 (397)
Q Consensus 84 --~~g~~vl~~~~~~~s~-~~~~~~~~---------~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~ 151 (397)
..+++|+..+..|++. ..++.... ....++..+|.+ |++++++.+.+++++|+++.+++..|.
T Consensus 125 ~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~~~aaiiiep~~~~gg~ 199 (403)
T PRK05093 125 HGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPFN-----DLAAVKAVIDDHTCAVVVEPIQGEGGV 199 (403)
T ss_pred CCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCCC-----CHHHHHHHhcCCeEEEEEecccCCCCC
Confidence 1235566556555554 43333210 001123334433 789999999888999999955444454
Q ss_pred ccc----HHHHHHHHHhcCcEEEEeccccc-Ccc----ccccCcccccEEEeccccccC-CCCceEEEEecCCCCccccc
Q psy8850 152 IQP----ILEIGELCRSKGVIFHCDAAQAV-GKI----DINIQNYKVDLMSFSAHKIYG-PKGIGALYIRRNPRTRIEAQ 221 (397)
Q Consensus 152 ~~~----l~~i~~l~~~~gi~livD~a~~~-~~~----~~~~~~~~~d~~~~s~~K~~g-~~g~g~~~~~~~~~~~~~~~ 221 (397)
..+ +++|.++|++||+++|+|++|+. +.. +.......+|+. |++|.++ +..+|+++++++..+.+...
T Consensus 200 ~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~--s~sK~l~~G~rig~vv~~~~i~~~l~~~ 277 (403)
T PRK05093 200 IPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLFAYMHYGVTPDIL--TSAKALGGGFPIGAMLTTAEIASHFKVG 277 (403)
T ss_pred ccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCCEE--EecccccCCcceEEEEEcHHHHhhcCCC
Confidence 433 79999999999999999999872 111 111223356765 5569443 33389999987765555432
Q ss_pred cccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-cEEEeCCCCCCCCceEEEEecC
Q psy8850 222 IHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIE-EIYINGDMNNRIPHNLNISFNF 300 (397)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 300 (397)
..+ ...+. +....++..++++.+.+ .++.+++.++++++.+.|++ +. .+.+.... ...+.++.+.++.
T Consensus 278 ~~~------~t~~~-~~~~~~aa~a~L~~~~~--~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~-~~~G~~~~~~l~~ 346 (403)
T PRK05093 278 THG------STYGG-NPLACAVAEAVFDIINT--PEVLEGVKARRQRFVDGLQK-INQKYGVFSEI-RGMGLLIGAELKP 346 (403)
T ss_pred CCC------CCCCC-CHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHH-HHhhCCCeEeE-eeCceEEEEEecC
Confidence 221 12233 33445555577777643 45667888889999999987 42 11111111 0113455566542
Q ss_pred C---ChHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHH
Q psy8850 301 I---EGESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 301 ~---~~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 373 (397)
. ...++...+. |+.+.++ +.+.+|++++..++++++++++++|.+++.++
T Consensus 347 ~~~~~~~~~~~~l~~~Gv~v~~~-----------------------g~~~lRl~~~~~~~~~~i~~~~~~l~~~l~~~ 401 (403)
T PRK05093 347 QYKGRARDFLNAAAEEGVMVLVA-----------------------GPDVLRFAPSLVIEEADIDEGLARFEKAVAKV 401 (403)
T ss_pred cchhHHHHHHHHHHHCCeEEecC-----------------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 1 2456666654 7776642 12789999998889999999999999988653
No 278
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.89 E-value=1.5e-20 Score=176.45 Aligned_cols=308 Identities=17% Similarity=0.185 Sum_probs=193.8
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCC
Q psy8850 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRG 86 (397)
Q Consensus 7 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g 86 (397)
+..+|.+.+++.+++..... ... ....+...++.+.+++..+. +.+++++||++|++.+++... .+ ..+
T Consensus 44 G~~~p~v~~a~~~~~~~~~~-~~~------~~~~~~~~~la~~l~~~~~~--~~~~~~~sG~~a~~~A~~~a~-~~-~g~ 112 (377)
T PRK02936 44 GHCHPTVTKAVQEQLDDIWH-VSN------LFTNSLQEEVASLLAENSAG--DLVFFCNSGAEANEAALKLAR-KH-TGK 112 (377)
T ss_pred CCCCHHHHHHHHHHHHhccc-ccc------ccCCHHHHHHHHHHHhcCCC--CEEEEeCCcHHHHHHHHHHHH-Hh-cCC
Confidence 46789999999999976321 111 01123445556666655443 479999999999999998543 22 233
Q ss_pred CEEEEcCCCChhh-HHHHHHHhhCCc---------EEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCccccccc--
Q psy8850 87 KHIITVQTEHKSV-LDSIRKLENDGF---------RVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP-- 154 (397)
Q Consensus 87 ~~vl~~~~~~~s~-~~~~~~~~~~g~---------~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~-- 154 (397)
++|++.++.|++. ............ .+..+|.+ |++++++.+.+++++|+++.+++++|...+
T Consensus 113 ~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~~~~~~~~ii~e~i~~~~G~~~~~~ 187 (377)
T PRK02936 113 SKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFN-----DIKALKEVMNEEVAAVMLEVVQGEGGVIPADP 187 (377)
T ss_pred CeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCC-----CHHHHHHhccCCeEEEEEecccCCCCCccCCH
Confidence 5677766655544 333332211010 12223322 789999999989999999999999887654
Q ss_pred --HHHHHHHHHhcCcEEEEeccccc-Ccc--ccc--cCcccccEEEeccccccC-CCCceEEEEecCCCCccccccccCC
Q psy8850 155 --ILEIGELCRSKGVIFHCDAAQAV-GKI--DIN--IQNYKVDLMSFSAHKIYG-PKGIGALYIRRNPRTRIEAQIHGGG 226 (397)
Q Consensus 155 --l~~i~~l~~~~gi~livD~a~~~-~~~--~~~--~~~~~~d~~~~s~~K~~g-~~g~g~~~~~~~~~~~~~~~~~~~~ 226 (397)
+++|.++|++||+++|+|++|.. +.. .+. .....+|+++ ++|.++ +..+|+++.+++..+.+.....
T Consensus 188 ~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~~~~~~~~~~di~t--~sK~l~~G~~ig~v~~~~~~~~~~~~~~~--- 262 (377)
T PRK02936 188 AFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQFGLDPDIVT--VAKGLGNGIPVGAMIGKKELGTAFGPGSH--- 262 (377)
T ss_pred HHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhhCCCCcEEE--EcccccCCCccEEEEEcHHHHhhccCCCC---
Confidence 89999999999999999999862 211 111 1223467664 569444 2237888888766555433211
Q ss_pred ccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---cCcEEEeCCCCCCCCceEEEEecCCCh
Q psy8850 227 HEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMES---IEEIYINGDMNNRIPHNLNISFNFIEG 303 (397)
Q Consensus 227 ~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (397)
.... ..+...+++..++++.+.. ..+.+++.++.+++++.|++. ++.+..+.. .+.++++.++. +.
T Consensus 263 ---~~t~-~~~~~~~aaa~a~l~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~----~g~~~~i~~~~-~~ 331 (377)
T PRK02936 263 ---GSTF-GGNPLAMAAAKEVLQVIKQ--PSFLEEVQEKGEYFLQKLQEELEHLECVKNIRG----KGLMIGIECTE-EV 331 (377)
T ss_pred ---CCCC-CCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHhhCCcEEeEee----cceEEEEEecc-hH
Confidence 1122 2455566666678877643 344566666777777776652 233222211 14466777753 24
Q ss_pred HHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHH
Q psy8850 304 ESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (397)
Q Consensus 304 ~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 369 (397)
..+...+. |+.+.++. .++|||+++..++++++++++++|.++
T Consensus 332 ~~~~~~l~~~gv~v~~~g-----------------------~~~lRi~p~~~~~~~~i~~~i~~l~~~ 376 (377)
T PRK02936 332 APVIEQLREEGLLVLSAG-----------------------PNVIRLLPPLVVTKEELDQAVYLLKKV 376 (377)
T ss_pred HHHHHHHHHCCeEEecCC-----------------------CCEEEEECCcccCHHHHHHHHHHHHHh
Confidence 55666654 77775431 278999998889999999999999875
No 279
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.89 E-value=1.9e-20 Score=176.70 Aligned_cols=319 Identities=14% Similarity=0.157 Sum_probs=203.0
Q ss_pred CCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhc--
Q psy8850 6 TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYK-- 83 (397)
Q Consensus 6 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~-- 83 (397)
.+..+|.|.+++.+++...... .. + ...+...++.+.|+++.+. +.+++++||++|++.+++.......
T Consensus 53 lGh~~p~v~~A~~~~~~~~~~~-~~-----~-~~~~~~~~la~~l~~~~~~--~~v~~~~sGseA~e~Alk~ar~~~~~~ 123 (406)
T PRK12381 53 LGHAHPALREALNEQASKFWHT-GN-----G-YTNEPVLRLAKKLIDATFA--DRVFFCNSGAEANEAALKLARKYAHDR 123 (406)
T ss_pred CCCCCHHHHHHHHHHHhhcccc-cC-----c-cCCHHHHHHHHHHHhhCCC--CeEEEcCCcHHHHHHHHHHHHHHHhhc
Confidence 4456899999999998763211 11 1 1123456788888888754 4899999999999999997543210
Q ss_pred --cCCCEEEEcCCCChhhHHHHHHHhhC-Cc---------EEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccc
Q psy8850 84 --KRGKHIITVQTEHKSVLDSIRKLEND-GF---------RVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGV 151 (397)
Q Consensus 84 --~~g~~vl~~~~~~~s~~~~~~~~~~~-g~---------~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~ 151 (397)
.++.+|+..+..|++.......+... .. .+..+|. .|++++++.+.+++++|+++. .+++|-
T Consensus 124 ~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~~aaviiEP-v~~~gg 197 (406)
T PRK12381 124 YGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAY-----NDLNSASALIDDQTCAVIVEP-IQGEGG 197 (406)
T ss_pred CCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCC-----CCHHHHHHhccCCeeEEEEeC-CcCCCC
Confidence 13466777677666665443333110 01 1122222 378999999988899998875 555554
Q ss_pred -cc-c---HHHHHHHHHhcCcEEEEecccc-cCcc----ccccCcccccEEEecccc-ccCCCCceEEEEecCCCCcccc
Q psy8850 152 -IQ-P---ILEIGELCRSKGVIFHCDAAQA-VGKI----DINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEA 220 (397)
Q Consensus 152 -~~-~---l~~i~~l~~~~gi~livD~a~~-~~~~----~~~~~~~~~d~~~~s~~K-~~g~~g~g~~~~~~~~~~~~~~ 220 (397)
+. | +++|.++|++||+++|+|++|. +|.. ........+|++ +++| +.|+..+|+++++++..+.+..
T Consensus 198 ~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~~~~~~~v~pDi~--t~sK~l~gG~~ig~~~~~~~~~~~~~~ 275 (406)
T PRK12381 198 VIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDVL--TTAKALGGGFPIGAMLTTEKCASVMTV 275 (406)
T ss_pred CcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcchhhhHhhCCCCCEE--EehhhhhCCCceEEEEEcHHHHhhcCC
Confidence 33 2 7899999999999999999985 2221 111223357775 5559 5443448999988766555543
Q ss_pred ccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-cEEEeCCCCCCCCceEEEEec
Q psy8850 221 QIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIE-EIYINGDMNNRIPHNLNISFN 299 (397)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~ 299 (397)
...+ ... ..+....++..++++.+.+ .++.++++++.+++.+.|++ +. ...+.... ...+.++.+.++
T Consensus 276 ~~~~------~t~-~~~pl~~aaa~a~l~~l~~--~~~~~~~~~~~~~l~~~L~~-l~~~~~~~~~v-rg~Gl~~~~~l~ 344 (406)
T PRK12381 276 GTHG------TTY-GGNPLASAVAGKVLELINT--PEMLNGVKQRHDWFVERLNT-INARYGLFSEI-RGLGLLIGCVLN 344 (406)
T ss_pred CCCC------CCC-CCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHH-HHhhCCCEEEE-ecCeEEEEEEec
Confidence 2211 122 2344555555577777653 45778888899999998887 42 12111111 111445555554
Q ss_pred CC---ChHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHHH
Q psy8850 300 FI---EGESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKLR 374 (397)
Q Consensus 300 ~~---~~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 374 (397)
.. ....+...+. |+.+.+. +.+.||++++..+++++|++++++|.+++.++.
T Consensus 345 ~~~~~~~~~~~~~l~~~Gv~v~~~-----------------------g~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~~~ 401 (406)
T PRK12381 345 AEYAGKAKQISQEAAKAGVMVLIA-----------------------GPNVVRFAPALNISEEEITTGLDRFARACERFV 401 (406)
T ss_pred CchhhHHHHHHHHHHHCCcEEeeC-----------------------CCCEEEEeCCccCCHHHHHHHHHHHHHHHHHHH
Confidence 31 2345555554 7776532 126899999988999999999999999998765
Q ss_pred h
Q psy8850 375 E 375 (397)
Q Consensus 375 ~ 375 (397)
+
T Consensus 402 ~ 402 (406)
T PRK12381 402 S 402 (406)
T ss_pred h
Confidence 4
No 280
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.89 E-value=4.7e-20 Score=172.69 Aligned_cols=319 Identities=18% Similarity=0.196 Sum_probs=199.4
Q ss_pred CCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhc--
Q psy8850 6 TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYK-- 83 (397)
Q Consensus 6 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~-- 83 (397)
.+..+|++.+++.+++.... .... ....+...++.+.+.+..+ .+.++|++||++|++.+++.+.....
T Consensus 50 lGh~~p~v~~a~~~q~~~~~-~~~~------~~~~~~~~~la~~l~~~~~--~~~v~f~~SGseA~e~Aik~ar~~~~~~ 120 (395)
T PRK03715 50 LGHCNPGMVEALAAQAEKLI-NPSP------AFYNEPMAKLAGLLTQHSC--FDKVFFANSGAEANEGAIKLARKWGRKH 120 (395)
T ss_pred CCCCCHHHHHHHHHHHHhcc-cccc------cccCHHHHHHHHHHhhccC--CCEEEEeCCcHHHHHHHHHHHHHHhhcc
Confidence 44568999999999987632 1111 0112334455555555433 34799999999999999997653211
Q ss_pred -cCCCEEEEcCC-CChhhHHHHHHHhhCCcEEEEeccCCC----CCCCHHHHHHHhcCCceEEEEecccCccccccc---
Q psy8850 84 -KRGKHIITVQT-EHKSVLDSIRKLENDGFRVTYLKPKNN----GLITLSQLEEKICSDTILVSVMLVNNEIGVIQP--- 154 (397)
Q Consensus 84 -~~g~~vl~~~~-~~~s~~~~~~~~~~~g~~v~~v~~~~~----~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~--- 154 (397)
..+.+|+..+. .|.++..++........+....|.... ...|++++++.+.+++++|+++.+++..|.+.|
T Consensus 121 ~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aavi~Epv~~~gG~~~~~~~ 200 (395)
T PRK03715 121 KNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLITDKTVAVMLEPVQGEGGVIPATRE 200 (395)
T ss_pred CCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcCCCceEEEEeCCcCCCCCccCCHH
Confidence 12245655555 445555554433211111111121111 124789999999888999999999999998877
Q ss_pred -HHHHHHHHHhcCcEEEEecccc-cCcc----ccccCcccccEEEecccc-ccCCCCceEEEEecCCCCccccccccCCc
Q psy8850 155 -ILEIGELCRSKGVIFHCDAAQA-VGKI----DINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEAQIHGGGH 227 (397)
Q Consensus 155 -l~~i~~l~~~~gi~livD~a~~-~~~~----~~~~~~~~~d~~~~s~~K-~~g~~g~g~~~~~~~~~~~~~~~~~~~~~ 227 (397)
++++.++|++||+++|+|++++ +|.. ..+.....+|++++| | +.|+.++|.++++++.. .+.+...
T Consensus 201 ~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a~~~~gv~PDi~t~g--K~lg~G~p~~av~~~~~i~-~~~~~~~---- 273 (395)
T PRK03715 201 FMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELSGIEPDIMTLG--KGIGGGVPLAALLAKAEVA-VFEAGDQ---- 273 (395)
T ss_pred HHHHHHHHHHHcCCEEEEeccccCCCCCcchhhHhhcCCCCceeeeh--hhhhCCcceEEEEEccccc-cccCCCc----
Confidence 8999999999999999999987 2221 112223368988776 9 65544578888887653 2211111
Q ss_pred cccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC---cEEEeCCCCCCCCceEEEEecCCChH
Q psy8850 228 EYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIE---EIYINGDMNNRIPHNLNISFNFIEGE 304 (397)
Q Consensus 228 ~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (397)
..+.+ .+...+++..++++.+.+ +++.++..++.++|++.|++ +. ++..+. ..+.++.+.+......
T Consensus 274 --~~T~~-g~pl~~aaala~L~~l~~--~~l~~~~~~~g~~l~~~L~~-l~~~~~i~~vr----G~Glm~~i~l~~~~~~ 343 (395)
T PRK03715 274 --GGTYN-GNPLMTAVGVAVISQLLA--PGFLEGVRARGEYLKEKLLE-LSEERGLEGER----GEGLLRALLLGKDIGP 343 (395)
T ss_pred --CCCCC-CCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHH-HhhcCCcCeEE----cceeEEEEEecCchHH
Confidence 11222 234556666688888764 56778888888888888876 31 221111 1245666666542223
Q ss_pred HHHHHhC-----CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHH
Q psy8850 305 SLLMAIK-----DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 305 ~~~~~l~-----~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 373 (397)
.+...+. |+.+... ..+.|||+++..+|++|||+++++|+++++++
T Consensus 344 ~~~~~~~~~~~~Gi~~~~~-----------------------~~~~lR~~p~l~~t~~ei~~~~~~l~~~l~~~ 394 (395)
T PRK03715 344 QIVEKARDMQPDGLLLNAP-----------------------RPNLLRFMPALNVTTEEIDQMIAMLRSVLDKL 394 (395)
T ss_pred HHHHHHHhccCCCEEEeec-----------------------CCCEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 3332222 5554321 12789999999999999999999999998764
No 281
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.89 E-value=2e-20 Score=177.93 Aligned_cols=327 Identities=18% Similarity=0.139 Sum_probs=200.4
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCC
Q psy8850 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRG 86 (397)
Q Consensus 7 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g 86 (397)
+..+|.|.+++.+++..... ... +....+...++.+.|+++++-..+.++|++||++|++.+++. .+.++++
T Consensus 58 Gh~~p~v~~a~~~q~~~~~~-~~~-----~~~~~~~~~~la~~L~~~~~~~~~~v~f~~SGseA~e~Alkl-Ar~~tgr- 129 (433)
T PRK08117 58 GHRHPKVVQAIKEQADKLMH-GPS-----GVIYYESILKLAEELAEITPGGLDCFFFSNSGAEAIEGALKL-AKHVTKR- 129 (433)
T ss_pred CCCCHHHHHHHHHHHHhccC-ccc-----cccCCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHHHHHH-HHHhcCC-
Confidence 45789999999999876321 110 011234567888899998843345799999999999999994 4444444
Q ss_pred CEEEEcCC-CChhhHHHHHHHhh-----CC-----cEEEEeccCCCCC------------CCHHHHHHHhc-----CCce
Q psy8850 87 KHIITVQT-EHKSVLDSIRKLEN-----DG-----FRVTYLKPKNNGL------------ITLSQLEEKIC-----SDTI 138 (397)
Q Consensus 87 ~~vl~~~~-~~~s~~~~~~~~~~-----~g-----~~v~~v~~~~~~~------------~d~~~l~~~i~-----~~~~ 138 (397)
.+|+.... .|..+..+...... .+ ..+..+|...... -+++++++.++ +++.
T Consensus 130 ~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~a 209 (433)
T PRK08117 130 PYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQVTPEEVA 209 (433)
T ss_pred CeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHHHHHHHHHhccCCCcEE
Confidence 45555554 44444444322110 00 1123444432111 14566777654 3578
Q ss_pred EEEEecccCccccccc----HHHHHHHHHhcCcEEEEeccccc-Ccc--cc--ccCcccccEEEecccc-ccCCCCceEE
Q psy8850 139 LVSVMLVNNEIGVIQP----ILEIGELCRSKGVIFHCDAAQAV-GKI--DI--NIQNYKVDLMSFSAHK-IYGPKGIGAL 208 (397)
Q Consensus 139 ~v~~~~~~~~tG~~~~----l~~i~~l~~~~gi~livD~a~~~-~~~--~~--~~~~~~~d~~~~s~~K-~~g~~g~g~~ 208 (397)
+|+++.+....|.+.| ++++.++|++||+++|+|++|+. |.. .+ ......+|++ +++| +.++..+|++
T Consensus 210 avi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~~~~~gv~pDi~--t~sK~lg~G~pigav 287 (433)
T PRK08117 210 AVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFAAQTFGVVPDIM--TIAKGIASGLPLSAV 287 (433)
T ss_pred EEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchhHhhcCCCCCEe--ehhhhccCCCcceeE
Confidence 9999999999999988 89999999999999999999983 111 11 1112346765 5559 5443347888
Q ss_pred EEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-cEEEeCCCC
Q psy8850 209 YIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIE-EIYINGDMN 287 (397)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~~~~ 287 (397)
+.+++....+.....+ ...+ .+...+++..++++.+.+ +.+.+++.++.+++++.|++ +. ...+... .
T Consensus 288 ~~~~~i~~~~~~~~~~------~T~~-~np~~~aaa~a~L~~l~~--~~l~~~~~~~g~~l~~~L~~-l~~~~~~~~~-v 356 (433)
T PRK08117 288 VASKELMEQWPLGSHG------TTFG-GNPVACAAALATLEVIKE--EKLLDNANEMGAYALERLEV-LKEKHPVIGD-V 356 (433)
T ss_pred EEcHHHHhhccCCCCC------CCCC-cCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHH-HHhcCCceee-e
Confidence 8887655444322111 1222 345556666688887754 35667777778888887776 32 1111111 1
Q ss_pred CCCCceEEEEecCCC-------hHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHH
Q psy8850 288 NRIPHNLNISFNFIE-------GESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKE 358 (397)
Q Consensus 288 ~~~~~~~~~~~~~~~-------~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~ 358 (397)
...+.++.+.|...+ ...+...+. |+.+.+. | ...+.+|++++..+|+++
T Consensus 357 rg~Gl~~gi~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----------------g----~~~~~lRl~p~~~~t~~~ 415 (433)
T PRK08117 357 RGIGLMIGIEIVDPDGEPDGDAVEKILDKCLEKGLLFYLC-----------------G----NAGNVLRMIPPLTVTKEE 415 (433)
T ss_pred ecCCcEEEEEEecCCCCcchHHHHHHHHHHHHCCCEEeec-----------------C----CCCCEEEEeCCccCCHHH
Confidence 122345555663211 123333333 6655431 0 013789999998999999
Q ss_pred HHHHHHHHHHHHHHHHh
Q psy8850 359 IDFTIKLLKMKVKKLRE 375 (397)
Q Consensus 359 i~~~~~~l~~~~~~~~~ 375 (397)
|++++++|.++++++.+
T Consensus 416 i~~~~~~l~~~l~~~~~ 432 (433)
T PRK08117 416 IDEGLDILDEALTEYEA 432 (433)
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999987643
No 282
>PLN02624 ornithine-delta-aminotransferase
Probab=99.88 E-value=2.3e-20 Score=178.54 Aligned_cols=315 Identities=14% Similarity=0.104 Sum_probs=200.0
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhh-cc-
Q psy8850 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFY-KK- 84 (397)
Q Consensus 7 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~-~~- 84 (397)
+..+|.|.+++.+++.... ...+ ....+...++.+.|+++++. +.++|++||++|++.+++....+. .+
T Consensus 90 Gh~~p~v~~ai~~ql~~~~-~~~~------~~~~~~~~~la~~L~~~~~~--~~~~f~~SGseA~e~AlklAr~~~~~~~ 160 (474)
T PLN02624 90 GHCHPKIIKALTEQAEKLT-LSSR------AFYNDKFPEFAEYLTSMFGY--DMVLPMNTGAEGVETAIKLARKWGYEKK 160 (474)
T ss_pred CCCCHHHHHHHHHHHHhcC-Cccc------ccCCHHHHHHHHHHHhhcCC--CeEEEeCChHHHHHHHHHHHHHHHHhhc
Confidence 3568999999999998732 1111 11134567788899998864 489999999999999999544321 11
Q ss_pred ----CCCEEEEcCCCChhhHHHHHHHhh-CC---------cEEEEeccCCCCCCCHHHHHHHhc---CCceEEEEecccC
Q psy8850 85 ----RGKHIITVQTEHKSVLDSIRKLEN-DG---------FRVTYLKPKNNGLITLSQLEEKIC---SDTILVSVMLVNN 147 (397)
Q Consensus 85 ----~g~~vl~~~~~~~s~~~~~~~~~~-~g---------~~v~~v~~~~~~~~d~~~l~~~i~---~~~~~v~~~~~~~ 147 (397)
.+.+|+.....|++.......+.. .. ..+..+|.+ |++.+++.++ +++++|+++.+++
T Consensus 161 g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~~~~~iaaiiiEpv~~ 235 (474)
T PLN02624 161 GIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDFG-----DLDALEKIFEEDGDRIAAFLFEPIQG 235 (474)
T ss_pred CCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCCC-----CHHHHHHHHHhCCCCEEEEEECCccC
Confidence 123566666666555333222211 00 112333332 7889998885 4688999999999
Q ss_pred ccccccc----HHHHHHHHHhcCcEEEEecccc-cCc----cccccCcccccEEEecccc-ccCC-CCceEEEEecCCCC
Q psy8850 148 EIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGK----IDINIQNYKVDLMSFSAHK-IYGP-KGIGALYIRRNPRT 216 (397)
Q Consensus 148 ~tG~~~~----l~~i~~l~~~~gi~livD~a~~-~~~----~~~~~~~~~~d~~~~s~~K-~~g~-~g~g~~~~~~~~~~ 216 (397)
++|.+.| +++|.++|++||+++|+|++|+ +|. ...+.....+|++++| | +.++ ..+|+++.+++...
T Consensus 236 ~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~~~a~~~~~i~pDiv~ls--K~lggG~~pigav~~~~~i~~ 313 (474)
T PLN02624 236 EAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKMLACDWEEVRPDVVILG--KALGGGVIPVSAVLADKDVML 313 (474)
T ss_pred CCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcchhhHHhcCCCCCEEEec--ccccCCCCcceeeeecHHHHh
Confidence 9999988 8999999999999999999997 321 1222234467888876 9 5443 34788888765544
Q ss_pred ccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---cCc-EEEeCCCCCCCCc
Q psy8850 217 RIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMES---IEE-IYINGDMNNRIPH 292 (397)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~-~~~~~~~~~~~~~ 292 (397)
.+.+...+ ...+ .+....++..++++.+.+ .++.++..++.+++++.|.+. ++. +..+.. .+.
T Consensus 314 ~~~~~~~~------~T~~-g~pl~~aaa~aaLe~l~~--~~l~~~~~~~~~~l~~~L~~l~~~~~~~i~~vrg----~G~ 380 (474)
T PLN02624 314 CIKPGEHG------STFG-GNPLASAVAMAALQVVQD--EKLAERSAKLGQELRDQLQKIQKQFPKLIKEVRG----RGL 380 (474)
T ss_pred HhccCCcC------CCCC-CCHHHHHHHHHHHHHHHh--chHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEe----eEE
Confidence 43322211 1223 344555555578877654 245556666666776666551 221 221211 133
Q ss_pred eEEEEecCC-----ChHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHH
Q psy8850 293 NLNISFNFI-----EGESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKL 365 (397)
Q Consensus 293 ~~~~~~~~~-----~~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~ 365 (397)
++.+.+... ...++...|. ||.+.++. ++.|||+++..+++++|++++++
T Consensus 381 ~~~i~l~~~~~~~~~a~~~~~~L~e~GV~v~p~~-----------------------~~~lR~~p~l~~t~e~id~~l~~ 437 (474)
T PLN02624 381 LNAVVLNSPKLGPVSAYDVCLKLKERGLLAKPTH-----------------------DTIIRLAPPLSISEDELQECSKA 437 (474)
T ss_pred EEEEEecCCCcChHHHHHHHHHHHhCCeEEecCC-----------------------CCEEEEECCccCCHHHHHHHHHH
Confidence 444455421 1235555554 77776531 37899999988999999999999
Q ss_pred HHHHHHHH
Q psy8850 366 LKMKVKKL 373 (397)
Q Consensus 366 l~~~~~~~ 373 (397)
|+++++.-
T Consensus 438 L~~~l~~~ 445 (474)
T PLN02624 438 LSDVLEHD 445 (474)
T ss_pred HHHHHHHH
Confidence 99887543
No 283
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.88 E-value=4.2e-20 Score=174.55 Aligned_cols=312 Identities=17% Similarity=0.189 Sum_probs=207.1
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhh-----
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFY----- 82 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~----- 82 (397)
..+|+|.+++.+.+.... ...+ . ...+...++.+.|+++++.+ .+++++||++|++.+++.+....
T Consensus 53 h~~p~v~~a~~~~~~~~~-~~~~---~---~~~~~~~~l~~~l~~~~~~~--~~~~~~SGs~A~e~ai~~a~~~~~~~~~ 123 (401)
T TIGR01885 53 HCHPKIVKALTEQAQKLT-LSSR---A---FYNDVFGEFAEYVTKLFGYD--KVLPMNTGAEAVETAIKLARKWGYKVKG 123 (401)
T ss_pred CCCHHHHHHHHHHHHhcc-cccc---c---cCCHHHHHHHHHHHhhcCCC--EEEEeCccHHHHHHHHHHHHHHhhhhcC
Confidence 458999999999987622 1111 1 12356788999999999854 79999999999999999765321
Q ss_pred -ccCCCEEEEcCCCChh-hHHHHHHHhh------CC---cEEEEeccCCCCCCCHHHHHHHhc---CCceEEEEecccCc
Q psy8850 83 -KKRGKHIITVQTEHKS-VLDSIRKLEN------DG---FRVTYLKPKNNGLITLSQLEEKIC---SDTILVSVMLVNNE 148 (397)
Q Consensus 83 -~~~g~~vl~~~~~~~s-~~~~~~~~~~------~g---~~v~~v~~~~~~~~d~~~l~~~i~---~~~~~v~~~~~~~~ 148 (397)
...+++|+.....|++ +..++..... .+ ..+..++.+ |++++++++. ++..+|+++.++++
T Consensus 124 ~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~~~~~~~~avi~E~v~~~ 198 (401)
T TIGR01885 124 IPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPYN-----NLEALEEALEDHGPNVCAFIVEPIQGE 198 (401)
T ss_pred CCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCCC-----CHHHHHHHHHhcCCCEEEEEEeCccCC
Confidence 1235678878877664 4554443211 01 123334333 7899998885 46778899999999
Q ss_pred cccccc----HHHHHHHHHhcCcEEEEecccc-cCcc--c--cccCcccccEEEecccc-ccCC-CCceEEEEecCCCCc
Q psy8850 149 IGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKI--D--INIQNYKVDLMSFSAHK-IYGP-KGIGALYIRRNPRTR 217 (397)
Q Consensus 149 tG~~~~----l~~i~~l~~~~gi~livD~a~~-~~~~--~--~~~~~~~~d~~~~s~~K-~~g~-~g~g~~~~~~~~~~~ 217 (397)
+|.+.| +++|.++|++||+++|+|++|. +|.. . .+...+.+|++++| | +.++ ..+|+++.+++....
T Consensus 199 ~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~~~~~~~~~~~~di~~~g--K~l~~g~~~ig~v~~~~~i~~~ 276 (401)
T TIGR01885 199 AGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLLCVDHENVKPDIVLLG--KALSGGVYPVSAVLADDDVMLT 276 (401)
T ss_pred CCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHHhhcCCCCCEEEee--ccccCCCCCcEEEEEcHHHHhh
Confidence 999988 8999999999999999999975 2211 1 22233467888766 9 5432 247888888765554
Q ss_pred cccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEE
Q psy8850 218 IEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNIS 297 (397)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 297 (397)
+.....+ ...+. +.....+..++++.+.+ ..+.++..++.+++++.|++ +. ..++... ...+.++.+.
T Consensus 277 ~~~~~~~------~t~~~-~p~~~~aa~a~L~~i~~--~~l~~~~~~~~~~~~~~L~~-l~-~~~~~~~-~g~g~~~~i~ 344 (401)
T TIGR01885 277 IKPGEHG------STYGG-NPLACAVAVAALEVLEE--EKLAENAEKLGEIFRDQLKK-LP-KPIITEV-RGRGLLNAIV 344 (401)
T ss_pred ccCCCCC------CCCCC-CHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHh-cc-CCceeEE-eecCeeEEEE
Confidence 4332111 12222 34555555678887765 24567888889999999998 53 1222111 1124455555
Q ss_pred ecCC----ChHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHH
Q psy8850 298 FNFI----EGESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKV 370 (397)
Q Consensus 298 ~~~~----~~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~ 370 (397)
++.. +..++...|. ||.+.++ ..+.+||+++..+++++|++++++|++++
T Consensus 345 ~~~~~~~~~~~~l~~~l~~~Gv~v~~~-----------------------~~~~lRi~p~l~~t~~~i~~~l~~l~~~l 400 (401)
T TIGR01885 345 IDESKTGRTAWDLCLKLKEKGLLAKPT-----------------------HGNIIRLAPPLVITEEQLDEGLEIIKKVI 400 (401)
T ss_pred eccCcchhHHHHHHHHHHhCCEEEEec-----------------------CCCEEEEeCCccCCHHHHHHHHHHHHHHh
Confidence 5432 3455666664 7776543 12789999998899999999999998875
No 284
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.88 E-value=2.6e-20 Score=176.74 Aligned_cols=326 Identities=16% Similarity=0.123 Sum_probs=209.8
Q ss_pred CCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhcc-
Q psy8850 6 TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKK- 84 (397)
Q Consensus 6 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~- 84 (397)
.+..+|.|.+++.+++...... . .+...+...++.+.|++++....+.++|++||++|++.+++... .+++
T Consensus 96 lGH~~p~v~~Ai~~ql~~l~~~------~-~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~AlklAr-~~t~~ 167 (459)
T PRK11522 96 VGHRNPVVVSAVQNQLAKQPLH------S-QELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAK-AYQSP 167 (459)
T ss_pred cCCCCHHHHHHHHHHHhhCccc------c-cccCCHHHHHHHHHHHHhCCCCCCEEEEeCCchHHHHHHHHHHH-HHhcc
Confidence 3467899999999999763211 1 11123456677888888876544579999999999999999654 3332
Q ss_pred C-CCEEEEcCCCChhhHHHHHHHh-hCCcE---------EEEeccCCCCCCCHHHHHHHhc------CCceEEEEecccC
Q psy8850 85 R-GKHIITVQTEHKSVLDSIRKLE-NDGFR---------VTYLKPKNNGLITLSQLEEKIC------SDTILVSVMLVNN 147 (397)
Q Consensus 85 ~-g~~vl~~~~~~~s~~~~~~~~~-~~g~~---------v~~v~~~~~~~~d~~~l~~~i~------~~~~~v~~~~~~~ 147 (397)
+ +.+|+....+|++......... ....+ +..+|. .|.+++++++. +++.+|+++.++.
T Consensus 168 ~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~~~~~~~iAavIvEpv~g 242 (459)
T PRK11522 168 RGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPF-----GNIEAMRTALSECKKTGDDVAAVILEPIQG 242 (459)
T ss_pred CCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCC-----CCHHHHHHHHHHhhccCCcEEEEEEecccC
Confidence 2 3567777766666554333221 11111 122222 26788888775 3578999999999
Q ss_pred ccccccc----HHHHHHHHHhcCcEEEEecccc-cCcc----ccccCcccccEEEecccc-ccCC-CCceEEEEecCCCC
Q psy8850 148 EIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKI----DINIQNYKVDLMSFSAHK-IYGP-KGIGALYIRRNPRT 216 (397)
Q Consensus 148 ~tG~~~~----l~~i~~l~~~~gi~livD~a~~-~~~~----~~~~~~~~~d~~~~s~~K-~~g~-~g~g~~~~~~~~~~ 216 (397)
..|.+.| ++++.++|++||+++|+|+++. +|.. ..+.....+|+++++ | +.|+ .++|.++++++...
T Consensus 243 ~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDivt~g--K~lggG~~Pigav~~~~~i~~ 320 (459)
T PRK11522 243 EGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMFACEHENVQPDILCLA--KALGGGVMPIGATIATEEVFS 320 (459)
T ss_pred CCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchhhhhhccCCCCCEEEec--hhhhCCCccceeEEEcHHHHH
Confidence 9999887 8999999999999999999985 3221 112223368988766 9 5543 35788888866544
Q ss_pred ccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-cEE-EeCCCCCCCCceE
Q psy8850 217 RIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIE-EIY-INGDMNNRIPHNL 294 (397)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~-~~~~~~~~~~~~~ 294 (397)
.+... ......+.+. |...+++..++++.+.+ +.+.++..++.++|++.|++ +. ... ++... ...+.++
T Consensus 321 ~~~~~----~~~~~~T~~g-np~~~Aaala~L~~i~~--~~l~~~~~~~g~~l~~~L~~-l~~~~~~~i~~V-rG~Gl~~ 391 (459)
T PRK11522 321 VLFDN----PFLHTTTFGG-NPLACAAALATINVLLE--QNLPAQAEQKGDYLLDGFRQ-LAREYPDLVQEA-RGKGMLM 391 (459)
T ss_pred HhccC----CcccCCCCCC-CHHHHHHHHHHHHHHhc--chHHHHHHHHHHHHHHHHHH-HHHhCCCceeeE-EeceeEE
Confidence 33210 0001112222 45555666688888765 35778888888888888877 31 111 11110 0114556
Q ss_pred EEEecCCC-hHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHH
Q psy8850 295 NISFNFIE-GESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVK 371 (397)
Q Consensus 295 ~~~~~~~~-~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 371 (397)
-+.+...+ ...+...+. |+.+.+.. ...+.+|+.++..++++|+|+++++|.++++
T Consensus 392 giel~~~~~~~~i~~~l~~~Gvl~~~~~---------------------~~~~~lr~~Ppl~~t~~~id~~l~~l~~~l~ 450 (459)
T PRK11522 392 AIEFVDNEIGYNFASEMFRQRVLVAGTL---------------------NNAKTIRIEPPLTLTIEQCEQVLKAARKALA 450 (459)
T ss_pred EEEecCchHHHHHHHHHHHCCeEEEecC---------------------CCCCEEEEECCccCCHHHHHHHHHHHHHHHH
Confidence 66665322 344555554 77765321 0137899999999999999999999999998
Q ss_pred HHHhc
Q psy8850 372 KLREL 376 (397)
Q Consensus 372 ~~~~~ 376 (397)
++.+.
T Consensus 451 ~~~~~ 455 (459)
T PRK11522 451 AMRVS 455 (459)
T ss_pred HHHHh
Confidence 87653
No 285
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.88 E-value=5.6e-20 Score=174.25 Aligned_cols=327 Identities=15% Similarity=0.134 Sum_probs=201.7
Q ss_pred CCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccC
Q psy8850 6 TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKR 85 (397)
Q Consensus 6 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~ 85 (397)
.+..+|.|.+++.+++..... .. ..+...+...++.+.|++..+..-+.++|++||++|++.+++.. +.++++
T Consensus 55 lGh~~p~v~~Ai~~ql~~~~~-~~-----~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGsEAve~AlklA-r~~tgr 127 (443)
T PRK08360 55 VGHNNPRVVKAIKEQTDKLIH-YT-----PIYGFPVEPLLLAEKLIEIAPGDNPKVSFGLSGSDANDGAIKFA-RAYTKR 127 (443)
T ss_pred cCCCCHHHHHHHHHHHHhccC-cc-----ccccCcHHHHHHHHHHHHhCCCCCCEEEEcCCHHHHHHHHHHHH-HHhcCC
Confidence 446789999999999986321 11 11111334567788888887654457999999999999999954 445444
Q ss_pred CCEEEEcCCCChhh-HHHHHHHhhC-------C--cEEEEeccCCCCC------------CCHHHHHHHhc-----CCce
Q psy8850 86 GKHIITVQTEHKSV-LDSIRKLEND-------G--FRVTYLKPKNNGL------------ITLSQLEEKIC-----SDTI 138 (397)
Q Consensus 86 g~~vl~~~~~~~s~-~~~~~~~~~~-------g--~~v~~v~~~~~~~------------~d~~~l~~~i~-----~~~~ 138 (397)
.+|+.....|++. ..+....... + ..+..+|.+.... .+++.+++++. ++++
T Consensus 128 -~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iA 206 (443)
T PRK08360 128 -RKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEVYAEGVA 206 (443)
T ss_pred -CeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhccCCCCeE
Confidence 5666655555444 4443322100 0 1234444432110 12445666663 4689
Q ss_pred EEEEecccCccccccc----HHHHHHHHHhcCcEEEEecccc-cCccc----cccCcccccEEEecccc-ccCCCCceEE
Q psy8850 139 LVSVMLVNNEIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKID----INIQNYKVDLMSFSAHK-IYGPKGIGAL 208 (397)
Q Consensus 139 ~v~~~~~~~~tG~~~~----l~~i~~l~~~~gi~livD~a~~-~~~~~----~~~~~~~~d~~~~s~~K-~~g~~g~g~~ 208 (397)
+|+++..++++|.+.| ++++.++|++||+++|+|++|+ ++... .......+|++++ +| +.++..+|++
T Consensus 207 Avi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~a~~~~~~~pDiitl--sK~l~~G~pigav 284 (443)
T PRK08360 207 ALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWFAIEHFGVEPDIITL--GKPLGGGLPISAT 284 (443)
T ss_pred EEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccchhhhhcCCCCCEEEe--cccccCCceeEEE
Confidence 9999999999998877 7899999999999999999987 32211 1122345788766 59 4433347999
Q ss_pred EEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCC
Q psy8850 209 YIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNN 288 (397)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 288 (397)
+++++....+.... ..+..+.++ ....+..++++.+.+ .++.++..++.++|++.|++......+..+. .
T Consensus 285 ~~~~~i~~~~~~~~------~~~T~~~~p-~~~aaa~a~l~~l~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~v-r 354 (443)
T PRK08360 285 IGRAEIMDSLPPLA------HAFTLSGNP-VASAAALAVIEEIEE--KNLLKRAEKLGNYTKKRLEEMKKKHELIGDV-R 354 (443)
T ss_pred EEcHHHHhhhcCCC------CCCCCCcCH-HHHHHHHHHHHHHHH--cCHHHHHHHHHHHHHHHHHHHHHhCCCeeee-e
Confidence 98876555543221 112233333 445555578887765 2466777777777777776511111122111 1
Q ss_pred CCCceEEEEecCCC---------hHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHH
Q psy8850 289 RIPHNLNISFNFIE---------GESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEK 357 (397)
Q Consensus 289 ~~~~~~~~~~~~~~---------~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~ 357 (397)
..+.++-+.|.... ...+...+. |+.+.+. ..+.+|++++..++++
T Consensus 355 g~Gl~~gie~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-----------------------~~~~lr~~P~l~~t~~ 411 (443)
T PRK08360 355 GIGLMIGVDLVKDRETKERAYEEAAKVVWRAWELGLIVTFF-----------------------SGNVLRIQPPLTIEKE 411 (443)
T ss_pred ccceEEEEEEecCCcccCccHHHHHHHHHHHHHCCeEEeec-----------------------CCCEEEEeCCCCCCHH
Confidence 12445555553211 123444443 6665421 1278999999999999
Q ss_pred HHHHHHHHHHHHHHHHHh
Q psy8850 358 EIDFTIKLLKMKVKKLRE 375 (397)
Q Consensus 358 ~i~~~~~~l~~~~~~~~~ 375 (397)
|||++++++.++++++++
T Consensus 412 ~id~~~~~l~~~l~~~~~ 429 (443)
T PRK08360 412 VLDEGLDILEEAIEDVEE 429 (443)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999999988865
No 286
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.88 E-value=1.8e-19 Score=168.85 Aligned_cols=309 Identities=19% Similarity=0.236 Sum_probs=191.1
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCC-cEEEeCChhHHHHHHHHHhHhhhccC
Q psy8850 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPR-EIIWTSGATESNNLAIKGAAHFYKKR 85 (397)
Q Consensus 7 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~-~i~~~~g~t~a~~~~l~~l~~~~~~~ 85 (397)
+. +|++++++.+++.....++.. ...++++.+++.+...++ .+++++||++|+..+++.... + .+
T Consensus 44 G~-~p~v~~a~~~~~~~~~~~~~~-----------~~~~~~~~la~~l~~~~~~~~~~~~SGseA~~~Al~~ar~-~-~~ 109 (375)
T PRK04260 44 GF-HPQVQQALQKQAGLIWHSPNL-----------YLNSLQEEVAQKLIGDKDYLAFFCNSGAEANEAAIKIARK-A-TG 109 (375)
T ss_pred CC-CHHHHHHHHHHHHhcCcccCc-----------cCCHHHHHHHHHHhcCcCCEEEEcCccHHHHHHHHHHHHH-h-cC
Confidence 45 788999999998763322211 223455666665543334 368999999999999886542 2 23
Q ss_pred CCEEEEcCCCC-hhhHHHHHHHhhC------CcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCccccccc----
Q psy8850 86 GKHIITVQTEH-KSVLDSIRKLEND------GFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP---- 154 (397)
Q Consensus 86 g~~vl~~~~~~-~s~~~~~~~~~~~------g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~---- 154 (397)
+++|++.+..| .++..+....... +..+..++.. -..|++++++++.+++.+|+++.+++++|.+.+
T Consensus 110 ~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~dl~~l~~~l~~~~a~vi~e~v~~~~G~~~~~~~~ 187 (375)
T PRK04260 110 KQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYA--IFNDLNSVKALVNKNTAAVMLELVQGESGVLPADKDF 187 (375)
T ss_pred CCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEe--CCCCHHHHHHhcCCCeEEEEECCeECCCCCcCCCHHH
Confidence 46676665554 4454444332110 1111111110 124899999998888899999999999998866
Q ss_pred HHHHHHHHHhcCcEEEEecccc-cCcc----ccccCcccccEEEeccccccC-CCCceEEEEecCCCCccccccccCCcc
Q psy8850 155 ILEIGELCRSKGVIFHCDAAQA-VGKI----DINIQNYKVDLMSFSAHKIYG-PKGIGALYIRRNPRTRIEAQIHGGGHE 228 (397)
Q Consensus 155 l~~i~~l~~~~gi~livD~a~~-~~~~----~~~~~~~~~d~~~~s~~K~~g-~~g~g~~~~~~~~~~~~~~~~~~~~~~ 228 (397)
++++.++|+++|+++|+|++|. ++.. ........+|++ |++|.++ +..+|+++++++....+......
T Consensus 188 l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~~~pdi~--t~sK~l~~G~~ig~~~~~~~~~~~~~~~~~~---- 261 (375)
T PRK04260 188 VKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGIEPDIF--TLAKGLANGVPVGAMLAKSSLGGAFGYGSHG---- 261 (375)
T ss_pred HHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhhCCCCCEE--EecccccCCcceEEEEEcHHHHhhcCCCCCC----
Confidence 7999999999999999999986 2211 111223467866 5669443 33479999987655544322111
Q ss_pred ccccCCCCchhHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCChHHH
Q psy8850 229 YGLRSGTLATHQIVGMGEAFRLARI--EMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESL 306 (397)
Q Consensus 229 ~~~~~~~~~~~~~~~l~~al~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (397)
... ..+.....+..++++.+.. .+++..+....+++.+.+.+.+ .+.+..+.. .+.++++.++ .+..++
T Consensus 262 --~t~-~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~----~g~~~~~~~~-~~~~~~ 332 (375)
T PRK04260 262 --STF-GGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQD-KETVTTVRG----LGYMIGIETT-ADLSQL 332 (375)
T ss_pred --CCC-CcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhh-CCCeeEEec----cceEEEEEec-CcHHHH
Confidence 112 2234455555567766543 2344444444555555555544 332222211 2556667764 345677
Q ss_pred HHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHH
Q psy8850 307 LMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (397)
Q Consensus 307 ~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 369 (397)
.+.+. |+.+.+. ..+.+|++++..++++++++++++|+++
T Consensus 333 ~~~l~~~Gi~v~~~-----------------------~~~~lR~~~~~~~t~~~i~~~l~~l~~~ 374 (375)
T PRK04260 333 VEAARDKGLIVLTA-----------------------GTNVIRLLPPLTLTKEEIEQGIAILSEV 374 (375)
T ss_pred HHHHHhCCCEEecC-----------------------CCCEEEEcCCCccCHHHHHHHHHHHHHh
Confidence 77765 7877543 1277999999889999999999999875
No 287
>KOG1368|consensus
Probab=99.88 E-value=5.7e-21 Score=161.10 Aligned_cols=315 Identities=19% Similarity=0.223 Sum_probs=215.8
Q ss_pred CCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccC
Q psy8850 6 TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKR 85 (397)
Q Consensus 6 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~ 85 (397)
.+.|..+++++|.++..... .| ...+...++++..++++|-+ ..+|++|||.++.++++.-+. ++
T Consensus 31 vT~PTdeMr~am~eA~vgDd------Vy----GeD~tt~rLE~~vA~l~GKE--AgLFv~SGTmgNllaIm~Hc~---~r 95 (384)
T KOG1368|consen 31 VTVPTDEMRRAMAEASVGDD------VY----GEDPTTNRLEQRVAELFGKE--AGLFVPSGTMGNLLAIMVHCH---QR 95 (384)
T ss_pred ccCChHHHHHHHhhcccCcc------cc----cCCccHHHHHHHHHHHhCcc--ceeeecccccccHHHHHHHhc---CC
Confidence 34567788888887764311 11 12335678899999999966 689999999999999887764 68
Q ss_pred CCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcC--------CceEEEEecccCccc-ccccHH
Q psy8850 86 GKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS--------DTILVSVMLVNNEIG-VIQPIL 156 (397)
Q Consensus 86 g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~--------~~~~v~~~~~~~~tG-~~~~l~ 156 (397)
|.+|++.+.+|.-.........-.|+.++.+...++|.++++++|+++.. -|++|++++.++.+| .++|++
T Consensus 96 g~eii~gd~~HI~~~E~gg~s~l~gv~~~tv~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle 175 (384)
T KOG1368|consen 96 GSEIIVGDRAHIHRYEQGGISQLAGVHVRTVKNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLE 175 (384)
T ss_pred CceEEeccchheeehhccChhhhccceeEeeeeCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHH
Confidence 99999999988766655444333488899999889999999999999962 378999999999887 889965
Q ss_pred ---HHHHHHHhcCcEEEEeccccc-----CccccccCcccccEEEecccc-ccCCCCceEEEEecCCCCccccc--cccC
Q psy8850 157 ---EIGELCRSKGVIFHCDAAQAV-----GKIDINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEAQ--IHGG 225 (397)
Q Consensus 157 ---~i~~l~~~~gi~livD~a~~~-----~~~~~~~~~~~~d~~~~s~~K-~~g~~g~g~~~~~~~~~~~~~~~--~~~~ 225 (397)
++.++|+++|+.+++|++--+ ..++..--.-.+|.+...++| +..|.| ++++++++.+.+.+.+ ..||
T Consensus 176 ~~~~v~~lak~~glkLH~DGARi~NAavasgV~vk~i~~~fDSVsiCLSKglgAPVG-SViVG~k~FI~kA~~~RKalGG 254 (384)
T KOG1368|consen 176 ELDRVKALAKRHGLKLHMDGARIFNAAVASGVPVKKICSAFDSVSICLSKGLGAPVG-SVIVGSKDFIDKARHFRKALGG 254 (384)
T ss_pred HHHHHHHHHhccCCeeecchhhhhhHHHHcCCCHHHHHHhhhhhhhhhhccCCCCcc-cEEEccHHHHHHHHHHHHHhcC
Confidence 577889999999999988432 112222111157888888889 777876 8888888776654322 1221
Q ss_pred CccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEE--EecCCCh
Q psy8850 226 GHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNI--SFNFIEG 303 (397)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 303 (397)
+.--.++++. +++--+.+-++ ..+.-..++..|.+.+.. .+++.+..+... ..++.+ .-+..+.
T Consensus 255 ---------GmRQsGvLaa-aaLval~~~~~-~L~~dHk~A~~lAe~~~~-~~~i~v~v~a~e--tNiv~~~l~q~~~~~ 320 (384)
T KOG1368|consen 255 ---------GMRQSGVLAA-AALVALDENVP-LLRADHKRAKELAEYINT-PEEIRVEVPAVE--TNIVNMVLCQARLTA 320 (384)
T ss_pred ---------chhHHHHHHH-HHHHHhhcchH-HHHHHHHHHHHHHHHhcc-ccceeeecchhh--cceeeeecccccCCH
Confidence 2222223322 12221222233 334445567777777776 666776654221 223332 3356788
Q ss_pred HHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHH-HHHHHH
Q psy8850 304 ESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLK-MKVKKL 373 (397)
Q Consensus 304 ~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~-~~~~~~ 373 (397)
..+.+.+. |+.+..|.. ..+|+.+....+++++|.+.+.+. .++.++
T Consensus 321 ~~l~~~~~k~gi~lm~~~s-----------------------~r~Rivlh~Qvt~~~ve~~~~~~~k~~~~q~ 370 (384)
T KOG1368|consen 321 EELCKFLEKNGILLMGGAS-----------------------RRIRIVLHHQVTDEDVEYVKSVLSKKFLKQL 370 (384)
T ss_pred HHHHHHHHHCCeEEeeccc-----------------------cceEEEEEEecCHHHHHHHHHHHHHHHHhhc
Confidence 88888887 777766521 458999999999999999999995 444443
No 288
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.88 E-value=5.1e-19 Score=170.68 Aligned_cols=336 Identities=17% Similarity=0.107 Sum_probs=226.3
Q ss_pred CcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhc--------cC------------------
Q psy8850 32 NHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYK--------KR------------------ 85 (397)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~--------~~------------------ 85 (397)
.+..++.......++-+++++++|.+.....+|+|||+|+..++...+.... ++
T Consensus 114 ~~e~SP~~t~lE~~vi~~la~l~G~~~~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~ 193 (608)
T TIGR03811 114 AYESSPATSQMEEEVGKEFATLMGYKNGWGHIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKE 193 (608)
T ss_pred ccccCchHHHHHHHHHHHHHHHhCCCCCCeEEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhccccccc
Confidence 4445666778888999999999999877788999999999988876553210 00
Q ss_pred ----------------------------CCEEEEcCCCChhhHHHHHHHhhCCc---EEEEeccCCCCCCCHHHHHHHhc
Q psy8850 86 ----------------------------GKHIITVQTEHKSVLDSIRKLENDGF---RVTYLKPKNNGLITLSQLEEKIC 134 (397)
Q Consensus 86 ----------------------------g~~vl~~~~~~~s~~~~~~~~~~~g~---~v~~v~~~~~~~~d~~~l~~~i~ 134 (397)
--+|+++...|.|..+++..+ |+ +++.||+++++.||+++|+++|.
T Consensus 194 ~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~il---GlG~~~vv~VpvD~~~rmd~~~L~~~I~ 270 (608)
T TIGR03811 194 IMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADII---GIGLDQVIPVPVDSNYRMDINELEKIIR 270 (608)
T ss_pred ccccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHHHHc---CCCcccEEEeecCCCCcCCHHHHHHHHH
Confidence 016899999999999999988 65 69999999999999999999986
Q ss_pred C------CceEEEEecccCcccccccHHHHHHHH---HhcCc--EEEEecccccCc---c--------ccc---------
Q psy8850 135 S------DTILVSVMLVNNEIGVIQPILEIGELC---RSKGV--IFHCDAAQAVGK---I--------DIN--------- 183 (397)
Q Consensus 135 ~------~~~~v~~~~~~~~tG~~~~l~~i~~l~---~~~gi--~livD~a~~~~~---~--------~~~--------- 183 (397)
+ .+-+|+.+..++.+|.+.|+++|+++| +++|+ ++|||+|++... . |++
T Consensus 271 ~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~ 350 (608)
T TIGR03811 271 KLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEY 350 (608)
T ss_pred HHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeeccccchhhhhhccccccccccchhhcccccc
Confidence 4 245788889999999999999999999 67888 699999999642 1 100
Q ss_pred -----------------cCc-ccccEEEecccc-ccCCCCceEEEEecCCCCcc----cccccc-C-Ccc---c-cccCC
Q psy8850 184 -----------------IQN-YKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRI----EAQIHG-G-GHE---Y-GLRSG 234 (397)
Q Consensus 184 -----------------~~~-~~~d~~~~s~~K-~~g~~g~g~~~~~~~~~~~~----~~~~~~-~-~~~---~-~~~~~ 234 (397)
+.. -.+|+++..+|| ++.|.++|++++++...... .+++.. + ... . ....|
T Consensus 351 ~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~~Py~~G~ll~Rd~~~~~~~~~~a~Yl~~~~~~~p~~~g~~~leg 430 (608)
T TIGR03811 351 GVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYIPYSAGGIVIQDIRMRDVISYFATYVFEKGADIPALLGAYILEG 430 (608)
T ss_pred cccccccccccHhHHHHHhcCcCceEEEeCcccccccCCCeEEEEEeCHHHHHHHhcCcchhccccccCcccccccceec
Confidence 001 168999999999 67788999999997632111 122211 0 000 0 01122
Q ss_pred CCchhHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHhhh-----cCcEEE--eCCCCCCCCceEEEEec--CCC
Q psy8850 235 TLATHQIVGMGEAFRLA---RIEMKEELKRILFLQKRLYNGLMES-----IEEIYI--NGDMNNRIPHNLNISFN--FIE 302 (397)
Q Consensus 235 ~~~~~~~~~l~~al~~~---~~~~~~~~~~~~~~~~~l~~~l~~~-----~~~~~~--~~~~~~~~~~~~~~~~~--~~~ 302 (397)
+.+-...++++.+++.+ .+++.++.++..++++++.+.|++. -+.+.+ ..++. ..+++|.+. +.+
T Consensus 431 SR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~~~~~~~~~~el~~~~~pd---lniV~Fr~~~~g~~ 507 (608)
T TIGR03811 431 SKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNLEFKVGDKEIEVHPLTKPD---FNMVDYVFNEKGND 507 (608)
T ss_pred CCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCeeEEecCCCC---cceEEEEEecCCCc
Confidence 22234466677777775 5689999999999999999999872 133444 34333 456666664 221
Q ss_pred ----hHHHHHHhC-CcEecc------------cCccCC-CCCChhhHHHhhCCCcc-----ccCceEEEeeC--CCCCHH
Q psy8850 303 ----GESLLMAIK-DIAVSS------------GSACTS-ASLEPSYVLRALGCNDE-----LAHSSIRFTIG--RFTTEK 357 (397)
Q Consensus 303 ----~~~~~~~l~-~i~~~~------------g~~~~~-~~~~~~~~~~~~g~~~~-----~~~~~iRi~~~--~~~~~~ 357 (397)
.+++.+++. ...+.. ..+... -...+....+.+|+... ..-..+|-++- +.++++
T Consensus 508 ~l~~~n~ln~~i~~~~~~~~g~~~~~~~~~s~t~~~~~~yg~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~m~p~~~~~~ 587 (608)
T TIGR03811 508 DLVKMNKLNHAFYDYASYVKGSIYNNEFITSHTDFAIPDYGDSPFAFVNSLGFSDEEWQRAGKVTILRASVMTPYMNDKE 587 (608)
T ss_pred cHHHHHHHHHHHHHhhccccCCCCCcceEeeecccccchhhhhHHHHHHHcCCChhhhccCCceEEEEEEecCcccCChh
Confidence 233333332 122221 111111 01122346777787743 23356888753 335678
Q ss_pred HHHHHHHHHHHHHHHH
Q psy8850 358 EIDFTIKLLKMKVKKL 373 (397)
Q Consensus 358 ~i~~~~~~l~~~~~~~ 373 (397)
.++.+.+.|++.+.+.
T Consensus 588 ~~~~~~~~~~~~~~~~ 603 (608)
T TIGR03811 588 NFDEYAPKIKAAMQEK 603 (608)
T ss_pred hHHHHHHHHHHHHHHH
Confidence 8999999988887554
No 289
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.88 E-value=9e-20 Score=174.70 Aligned_cols=334 Identities=18% Similarity=0.146 Sum_probs=202.5
Q ss_pred CCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhC-CCCCcEEEeCChhHHHHHHHHHhHhhh--
Q psy8850 6 TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIY-ADPREIIWTSGATESNNLAIKGAAHFY-- 82 (397)
Q Consensus 6 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~-~~~~~i~~~~g~t~a~~~~l~~l~~~~-- 82 (397)
.+..+|.|.+++.+++..... .+. .. + ...+...++.+.|.+++. .+.+.++|++||++|++.+++......
T Consensus 103 lGh~hp~v~~Av~~ql~~~~~-~~~-~~--~-~~~~~~~~lae~L~~~~~~~~~~~v~f~~SGsEA~e~AlKlAr~~~~~ 177 (504)
T PLN02760 103 LGGSEPRLVAAATEQLNKLPF-YHS-FW--N-RTTKPSLDLAKELLEMFTARKMGKVFFTNSGSEANDTQVKLVWYYNNA 177 (504)
T ss_pred cCCCCHHHHHHHHHHHhhccc-eec-cc--c-cCcHHHHHHHHHHHhhcCCCCCCEEEEeCChHHHHHHHHHHHHHHHHh
Confidence 346789999999999976221 000 00 0 123455677788777753 333569999999999999999764321
Q ss_pred -cc-CCCEEEEcCCCChhh-HHHHHHHhh------CCc---EEEEeccCCCCC-------------CCHHHHHHHhc---
Q psy8850 83 -KK-RGKHIITVQTEHKSV-LDSIRKLEN------DGF---RVTYLKPKNNGL-------------ITLSQLEEKIC--- 134 (397)
Q Consensus 83 -~~-~g~~vl~~~~~~~s~-~~~~~~~~~------~g~---~v~~v~~~~~~~-------------~d~~~l~~~i~--- 134 (397)
.. .+.+|+..+..|++. ..++..... .+. .+..++.+.... ...+++++++.
T Consensus 178 ~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~ 257 (504)
T PLN02760 178 LGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLADNLENLILKEG 257 (504)
T ss_pred cCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHHHHHHHHHHHHhcC
Confidence 11 134566555555444 433332210 010 122233221000 01245777663
Q ss_pred -CCceEEEEecccCccccccc----HHHHHHHHHhcCcEEEEeccc-ccCccc----cccCcccccEEEecccc-ccCC-
Q psy8850 135 -SDTILVSVMLVNNEIGVIQP----ILEIGELCRSKGVIFHCDAAQ-AVGKID----INIQNYKVDLMSFSAHK-IYGP- 202 (397)
Q Consensus 135 -~~~~~v~~~~~~~~tG~~~~----l~~i~~l~~~~gi~livD~a~-~~~~~~----~~~~~~~~d~~~~s~~K-~~g~- 202 (397)
+++.+|+++.+....|.+.| ++++.++|++||+++|+|+++ ++|... .+.....+|+++++ | +.|+
T Consensus 258 ~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlg--K~lggG~ 335 (504)
T PLN02760 258 PETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFGCDKYNIKPDLVSLA--KALSSAY 335 (504)
T ss_pred CCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhhHHHhcCCCCcEEEec--ccccCCc
Confidence 35789999999999999888 899999999999999999999 454431 12223468988877 9 5443
Q ss_pred CCceEEEEecCCCCcccccccc-CCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEE
Q psy8850 203 KGIGALYIRRNPRTRIEAQIHG-GGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIY 281 (397)
Q Consensus 203 ~g~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 281 (397)
.++|.++++++..+.+...... +.....++.+. +...+++..++|+.+.+ +++.++.+++.++|++.|++ +....
T Consensus 336 ~PigAv~~~~~i~d~~~~~~~~~~~~~h~~T~~g-nPl~~Aaala~Le~i~~--~~l~~~~~~~g~~l~~~L~~-l~~~~ 411 (504)
T PLN02760 336 MPIGAVLVSPEISDVIHSQSNKLGSFAHGFTYSG-HPVSCAVALEALKIYKE--RNIPEHVNKIAPRFQDGIKA-FSGSP 411 (504)
T ss_pred cccceEeecHHHHhhhhcccccccCcccCCCCCC-CHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHH-HhcCC
Confidence 2478888887766555321100 01112233444 44555555588888766 36788888888888888877 43222
Q ss_pred EeCCCCCCCCceEEEEecCCC------------hHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEE
Q psy8850 282 INGDMNNRIPHNLNISFNFIE------------GESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIR 347 (397)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iR 347 (397)
++.. -...+.++-+.+.... ...+...+. |+.+.+. ++.+|
T Consensus 412 ~v~~-vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~------------------------g~~lr 466 (504)
T PLN02760 412 IIGE-IRGTGLILGTEFVDNKSPNDPFPAEWGVGAYFGAECKKRGMLVRVA------------------------GDNIM 466 (504)
T ss_pred Ceee-EEeCceEEEEEEecCCcccccccchhHHHHHHHHHHHhCCcEEEec------------------------CCEEE
Confidence 2211 1112345555553211 122333333 6665432 25789
Q ss_pred EeeCCCCCHHHHHHHHHHHHHHHHHHHh
Q psy8850 348 FTIGRFTTEKEIDFTIKLLKMKVKKLRE 375 (397)
Q Consensus 348 i~~~~~~~~~~i~~~~~~l~~~~~~~~~ 375 (397)
++++..+|++|||+++++|.+++.++.+
T Consensus 467 l~Ppl~it~eeid~~~~~l~~al~~~~~ 494 (504)
T PLN02760 467 MSPPLIITPEEVDELISIYGKALKATEE 494 (504)
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999877644
No 290
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.87 E-value=3.9e-21 Score=159.58 Aligned_cols=162 Identities=23% Similarity=0.324 Sum_probs=134.1
Q ss_pred HHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhH-HHHHHHhhCCcEEEEeccCCC
Q psy8850 43 IEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVL-DSIRKLENDGFRVTYLKPKNN 121 (397)
Q Consensus 43 ~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~-~~~~~~~~~g~~v~~v~~~~~ 121 (397)
+.++++.++++++.+.+++.+++|+|+|+.+++.++. +++++|+++++.|+++. ...... |.+++.++.+.+
T Consensus 2 ~~~~~~~l~~~~~~~~~~~~~~~~~t~a~~~~~~~~~----~~~~~v~~~~~~~~~~~~~~~~~~---g~~~~~v~~~~~ 74 (170)
T cd01494 2 LEELEEKLARLLQPGNDKAVFVPSGTGANEAALLALL----GPGDEVIVDANGHGSRYWVAAELA---GAKPVPVPVDDA 74 (170)
T ss_pred HHHHHHHHHHHcCCCCCcEEEeCCcHHHHHHHHHHhC----CCCCEEEEeecccceehhhHHHhc---CCEEEEeccCCC
Confidence 4678999999997666789999999999999999987 67899999999999998 444333 999999998765
Q ss_pred CCCCH--HHHHHHh-cCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCcccc---ccCcccccEEEec
Q psy8850 122 GLITL--SQLEEKI-CSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDI---NIQNYKVDLMSFS 195 (397)
Q Consensus 122 ~~~d~--~~l~~~i-~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~---~~~~~~~d~~~~s 195 (397)
+..+. +.+++.. .++++++++++++|++|...|+++|+++|+++|+++|+|++++.+.... +....++|+++.|
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~d~~~~s 154 (170)
T cd01494 75 GYGGLDVAILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPGVLIPEGGADVVTFS 154 (170)
T ss_pred CccchhhhhhhhccccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEecccccccccccccccccccCCEEEEE
Confidence 43333 2554433 5689999999999999999999999999999999999999999777654 4555589999999
Q ss_pred cccccCCCCceEEEEe
Q psy8850 196 AHKIYGPKGIGALYIR 211 (397)
Q Consensus 196 ~~K~~g~~g~g~~~~~ 211 (397)
+||++|+.|.|+++++
T Consensus 155 ~~K~~~~~~~G~l~~~ 170 (170)
T cd01494 155 LHKNLGGEGGGVVIVK 170 (170)
T ss_pred cccccCCCceEEEEeC
Confidence 9996565788999874
No 291
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.87 E-value=7.2e-20 Score=172.54 Aligned_cols=318 Identities=15% Similarity=0.089 Sum_probs=201.3
Q ss_pred CCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhc-c
Q psy8850 6 TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYK-K 84 (397)
Q Consensus 6 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~-~ 84 (397)
.+..+|.|.+++.+++...... + . +...+...++.+.|++++....+.++|++||++|++++++....... .
T Consensus 89 lGh~hp~v~~Av~~ql~~l~~~--~-~----~~~~~~~~~lAe~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~t~~~ 161 (442)
T TIGR03372 89 VGHRNPNVIAAVENQLAKQPLH--S-Q----ELLDPLRALLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPR 161 (442)
T ss_pred cCCCCHHHHHHHHHHHHhCCCc--c-c----ccCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHHHhhc
Confidence 4567899999999999763211 1 1 11234567788888888764445799999999999999996543221 1
Q ss_pred CCCEEEEcCCCChhhHHHHHHH-hhC----C-----cEEEEeccCCCCCCCHHHHHHHhc------CCceEEEEecccCc
Q psy8850 85 RGKHIITVQTEHKSVLDSIRKL-END----G-----FRVTYLKPKNNGLITLSQLEEKIC------SDTILVSVMLVNNE 148 (397)
Q Consensus 85 ~g~~vl~~~~~~~s~~~~~~~~-~~~----g-----~~v~~v~~~~~~~~d~~~l~~~i~------~~~~~v~~~~~~~~ 148 (397)
.+.+|+.....|++.......+ ... + ..+..+|.+ |.+++++.+. +++.+|+++.+...
T Consensus 162 gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~-----d~~~~~~~l~~~~~~~~~vAavIvEpv~g~ 236 (442)
T TIGR03372 162 GKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFG-----DIEAMLKALNECKKTGDDVAAIILEPIQGE 236 (442)
T ss_pred CCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCC-----CHHHHHHHHHHHhcCCCcEEEEEEeCccCC
Confidence 3456777777666654333322 110 0 112334433 6777777664 35789999999999
Q ss_pred cccccc----HHHHHHHHHhcCcEEEEecccc-cCcc----ccccCcccccEEEecccc-ccCC-CCceEEEEecCCCCc
Q psy8850 149 IGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKI----DINIQNYKVDLMSFSAHK-IYGP-KGIGALYIRRNPRTR 217 (397)
Q Consensus 149 tG~~~~----l~~i~~l~~~~gi~livD~a~~-~~~~----~~~~~~~~~d~~~~s~~K-~~g~-~g~g~~~~~~~~~~~ 217 (397)
.|.+.| ++++.++|++||+++|+|+++. +|.. ..+.....+|+++++ | +.|+ ..+|.++++++..+.
T Consensus 237 gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDivt~g--K~lg~G~~Pigavv~~~~i~~~ 314 (442)
T TIGR03372 237 GGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKMFACEHEGVQPDILCLA--KALGGGVMPIGATIATEAVFSV 314 (442)
T ss_pred CCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccchhhhhcCCCCCeeeeh--hhhcCCcccceEEEecHHHHHh
Confidence 999888 8999999999999999999985 3322 112223368998865 9 6544 347888888765544
Q ss_pred cccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---cC-cEEEeCCCCCCCCce
Q psy8850 218 IEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMES---IE-EIYINGDMNNRIPHN 293 (397)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~~-~~~~~~~~~~~~~~~ 293 (397)
+... ......+.+. |...+++..++|+.+.+ .++.++..++.++|++.|++. .+ .+.-+. ..+.+
T Consensus 315 ~~~~----~~~~~~T~~g-np~~~Aaa~a~L~~i~~--~~l~~~~~~~G~~l~~~L~~l~~~~~~~i~~vR----G~Gl~ 383 (442)
T TIGR03372 315 LFDN----PFLHTTTFGG-NPLACAAALATINELLE--KNLPAQAAIKGDFLLDGFQQLAAEYPDLIIEAR----GKGLL 383 (442)
T ss_pred hhcc----CccccCCCCC-CHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHHhCCCceEEEe----cceEE
Confidence 4210 0001112222 44555555588888765 345667777777777777661 22 111111 12456
Q ss_pred EEEEecCC-ChHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHH
Q psy8850 294 LNISFNFI-EGESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (397)
Q Consensus 294 ~~~~~~~~-~~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 369 (397)
+-+.+... ....+...+. |+.+.+.. + ..+.+||.++..+|++|+|+++++|.++
T Consensus 384 ~giel~~~~~~~~i~~~l~~~Gvl~~~~~---~------------------~~~~lr~~Ppl~~t~~~id~~~~~l~~~ 441 (442)
T TIGR03372 384 MAIEFRDNEIGYAFAKELFQQNILVAGTL---N------------------NAKSIRIEPPLTITIEQCALVIKAAKDA 441 (442)
T ss_pred EEEEeCChHHHHHHHHHHHHCCcEEeecC---C------------------CCCEEEEECCcccCHHHHHHHHHHHHHh
Confidence 66666532 2345555554 77664320 0 1278999999999999999999999875
No 292
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.87 E-value=3.5e-21 Score=176.55 Aligned_cols=229 Identities=21% Similarity=0.270 Sum_probs=171.8
Q ss_pred HHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCC
Q psy8850 42 AIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNN 121 (397)
Q Consensus 42 ~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~ 121 (397)
.+.+.++.+++.+|++ ...++++|+|.++..++.+++ ++||+|+++..+|.|...++... |+++++++...+
T Consensus 67 ~I~eAe~~aA~~fGAd-~t~flvnGsT~g~~a~i~a~~----~~gd~VLv~RN~HkSv~~alil~---ga~Pvyi~p~~~ 138 (417)
T PF01276_consen 67 IIKEAEELAARAFGAD-KTFFLVNGSTSGNQAMIMALC----RPGDKVLVDRNCHKSVYNALILS---GAIPVYIPPEDN 138 (417)
T ss_dssp HHHHHHHHHHHHHTES-EEEEESSHHHHHHHHHHHHHT----TTTCEEEEETT--HHHHHHHHHH---TEEEEEEEEEE-
T ss_pred HHHHHHHHHHHhcCCC-eEEEEecCchHHHHHHHHHhc----CCCCEEEEcCCcHHHHHHHHHHc---CCeEEEecCCcc
Confidence 7889999999999998 368889999999999999998 89999999999999999999988 999999977521
Q ss_pred -----CCCCH-----HHHHHHhcCC-----ceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccC----cccc
Q psy8850 122 -----GLITL-----SQLEEKICSD-----TILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVG----KIDI 182 (397)
Q Consensus 122 -----~~~d~-----~~l~~~i~~~-----~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~----~~~~ 182 (397)
+.+++ +.+++++++. ++++++++|++ -|.+.++++|+++|+++|++|+||+||+.- ..+.
T Consensus 139 ~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY-~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~lp~ 217 (417)
T PF01276_consen 139 EYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY-YGVCYDIKEIAEICHKHGIPLLVDEAHGAHFGFHPLPR 217 (417)
T ss_dssp TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T-TSEEE-HHHHHHHHCCTECEEEEE-TT-TTGGCSGGGT
T ss_pred ccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCC-CeEEECHHHHHHHhcccCCEEEEEccccccccCCCCcc
Confidence 25667 8999998753 34588988854 499999999999999999999999999832 2233
Q ss_pred ccCccccc-------EEEecccc-ccCCCCceEEEEecCC-C--CccccccccCCccccccCCCCchhHHHHHHHHHHHH
Q psy8850 183 NIQNYKVD-------LMSFSAHK-IYGPKGIGALYIRRNP-R--TRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLA 251 (397)
Q Consensus 183 ~~~~~~~d-------~~~~s~~K-~~g~~g~g~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~ 251 (397)
+....++| +++.|.|| +.+....+++.++... . +++...+ .-+.+++|++..++++..+..++
T Consensus 218 ~a~~~gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~~v~~~~~~~~l------~~~~TTSPSY~lmASlD~a~~~m 291 (417)
T PF01276_consen 218 SALALGADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDRIVDHERVNEAL------SMHQTTSPSYPLMASLDVARAQM 291 (417)
T ss_dssp TCSSTTSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCCCTTHHHHHHHH------HHHS-SS--HHHHHHHHHHHHHH
T ss_pred chhhccCccccccceeeeechhhcccccccceEEEecCCCcccHHHHHHHH------HHHcCCChHHHHHHHHHHHHHHH
Confidence 44456889 99999999 7788788999999765 2 2222222 22446678889999999998888
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHH---hhhcCcEEEeCCC
Q psy8850 252 -RIEMKEELKRILFLQKRLYNGL---MESIEEIYINGDM 286 (397)
Q Consensus 252 -~~~~~~~~~~~~~~~~~l~~~l---~~~~~~~~~~~~~ 286 (397)
...-+++.++..++...+++.| .+ ..++.++.++
T Consensus 292 ~~~~G~~l~~~~i~~a~~~R~~i~~~~~-~~~~~~~~~~ 329 (417)
T PF01276_consen 292 EEEEGRELLEEAIELAEEFRKKINRLND-IWGFKVLGPE 329 (417)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHCC-T-SSEESS-S
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhcCC-CceEecCCcc
Confidence 5555777788888888888888 44 6677777653
No 293
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=99.87 E-value=7.4e-20 Score=160.12 Aligned_cols=331 Identities=16% Similarity=0.156 Sum_probs=223.6
Q ss_pred CCCCCCCHHHHHHHHHHHhhccCCCC--CCCcchhhhHHHHHHHHHHHHHHHhCCCCCc-EEE-eCChhHHHHHHHHHhH
Q psy8850 4 SATTPIDPRVVDKMIPYLRVQFGNPA--SRNHIYGWTAEKAIEKARNEVAQLIYADPRE-IIW-TSGATESNNLAIKGAA 79 (397)
Q Consensus 4 ~~~~~~~~~v~~a~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~-i~~-~~g~t~a~~~~l~~l~ 79 (397)
+++...|++|++..++.+..+.+-.. ......+........++++.+++++++|.+. |.| ..|+|....++...|.
T Consensus 11 aGPa~lp~~vL~~a~~e~~~~~g~g~svme~SHRsk~~~~v~~~a~~~lreLl~iPd~Y~VlflqGGat~qf~~~p~nLl 90 (365)
T COG1932 11 AGPAALPPEVLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLEEAEKDLRELLNIPDDYKVLFLQGGATGQFAMAPMNLL 90 (365)
T ss_pred CCcccCCHHHHHHHHHHHhhhccCCcceeeeccccHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCccHHHHHHHHHhhh
Confidence 45556789999998888877554111 1112224566788999999999999999774 555 5577778999999988
Q ss_pred hhhccCCCE--EEEcCCCChhhHHHHHHHhhCCc--EEEEeccCC--CC-CCCHHHHHHHhcCCceEEEEecccCccccc
Q psy8850 80 HFYKKRGKH--IITVQTEHKSVLDSIRKLENDGF--RVTYLKPKN--NG-LITLSQLEEKICSDTILVSVMLVNNEIGVI 152 (397)
Q Consensus 80 ~~~~~~g~~--vl~~~~~~~s~~~~~~~~~~~g~--~v~~v~~~~--~~-~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~ 152 (397)
.++.. |.+..++-.+...+- +.+. ++....... .+ -++++... +.++...|.+++..+.+|+.
T Consensus 91 ----~~~~~~yv~~g~Ws~~a~~eA~----~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~~~~ayv~~~~NeTi~Gv~ 160 (365)
T COG1932 91 ----GKRGTDYVDTGAWSEFAIKEAK----KVGKQPKLIDARIEEAGYGSIPDLSKWD--FSDNDAYVHFCWNETISGVE 160 (365)
T ss_pred ----cccCceeEeeeehhHhHHHHHH----HhcccccccccceeccCccCCCChhhcc--cCCCccEEEEecCCcccceE
Confidence 34332 555544444443332 2232 222222112 22 22333322 44456779999999999998
Q ss_pred ccH-HHHHHHHHhcCcEEEEecccccCccccccCcccccEEEeccccccCCCCceEEEEecCCCCccccc----cccC--
Q psy8850 153 QPI-LEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQ----IHGG-- 225 (397)
Q Consensus 153 ~~l-~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~~~~----~~~~-- 225 (397)
.+- ..+. . +.++++|.++.....++|+. ..|++.++.+|.+||.|.++++++++++++.+.. ++..
T Consensus 161 v~~~p~~~---~--~~~~v~D~SS~ilsr~iDvs--k~dviyagaQKnlGpaGltvvIvr~~~l~r~~~~~~P~if~y~~ 233 (365)
T COG1932 161 VPELPDIG---S--DGLLVADASSAILSRPIDVS--KYDVIYAGAQKNLGPAGLTVVIVRPDLLERAESYTLPSIFDYLT 233 (365)
T ss_pred ccCCCCCC---C--CceEEEecccHHhcCCCChh--HcceEEEehhhccCccceEEEEEcHHHHhcccccCCchHhhchh
Confidence 772 2221 1 28999999999999999988 6899999999999999999999999988887554 2221
Q ss_pred CccccccCCCCchhHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCC-
Q psy8850 226 GHEYGLRSGTLATHQIVGMGEAFRLARI--EMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIE- 302 (397)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~l~~al~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 302 (397)
....+...+||++..+..+...++++.+ |++.+.++..+.++.|++.+++ .+.+.....+..+....++|.+.+.+
T Consensus 234 ~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~-s~fy~~~v~~~~RS~mnV~f~~~~~~l 312 (365)
T COG1932 234 HADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDK-SDFYRNLVAKANRSRMNVTFTLVDAEL 312 (365)
T ss_pred hhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHh-CCccccccchhhccceeEEEEcCcHHH
Confidence 1123455778888999988899999976 6999999999999999999999 43333333333443333444444322
Q ss_pred hHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHH
Q psy8850 303 GESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 303 ~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 373 (397)
...++..+. |+..-.| +- ..+.+|+++...++.++++.+++.|+.+.+++
T Consensus 313 d~~fv~eae~~gl~~lkG-hr--------------------~vgGmRasiynA~~~e~veaL~~fm~~f~~~~ 364 (365)
T COG1932 313 DKGFVAEAEAAGLIYLKG-HR--------------------SVGGLRASIYNAVPLEDVEALTDFMDWFEETY 364 (365)
T ss_pred HHHHHHHHHHcCCceecc-cc--------------------CCCceeeeeecCCCHHHHHHHHHHHHHHHHhh
Confidence 233443333 5555544 11 22559999999999999999999999987764
No 294
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.87 E-value=3.5e-19 Score=158.15 Aligned_cols=314 Identities=12% Similarity=0.104 Sum_probs=214.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCcEEEeC-ChhHHHHHHHHHhHhhhc----cCCCEEEEcCCCChhhHHHHHHHhhCCcEEE
Q psy8850 40 EKAIEKARNEVAQLIYADPREIIWTS-GATESNNLAIKGAAHFYK----KRGKHIITVQTEHKSVLDSIRKLENDGFRVT 114 (397)
Q Consensus 40 ~~~~~~~~~~la~~~~~~~~~i~~~~-g~t~a~~~~l~~l~~~~~----~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~ 114 (397)
.+.+.+++++|++..|.+ .+.+.+ +|+++-.+-+..+...+. ..+++||+++..|+++-.++.+. |++|+
T Consensus 108 l~li~~Lq~~L~~ITG~D--avsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPASAam~---G~~VV 182 (496)
T COG1003 108 LELIYELQEWLKEITGMD--AVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPASAAMA---GFKVV 182 (496)
T ss_pred HHHHHHHHHHHHHhcCCc--eeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChhhHhhc---CceEE
Confidence 468889999999999988 455544 444555555554443322 24589999999999999999988 99999
Q ss_pred EeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCcccc-ccCcccccEEE
Q psy8850 115 YLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDI-NIQNYKVDLMS 193 (397)
Q Consensus 115 ~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~-~~~~~~~d~~~ 193 (397)
.|+++++|.+|+++|++++.++++++.+++|++-.=.-.++.+|+++.|++|..|..|+++--+.+.. ...++++|++-
T Consensus 183 ~V~~~~~G~VDlddLk~k~~~~~AalMiTnPsT~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~rPGd~G~DV~H 262 (496)
T COG1003 183 VVKCDENGNVDLDDLRAKAEDNLAALMITNPSTLGVFEEDIREICEIVHEAGGQVYYDGANLNAIVGLARPGDMGFDVVH 262 (496)
T ss_pred EEecCCCCCccHHHHHHHhccceeEEEeccCcccccchhhHHHHHHHHHHcCCEEEecCcchhhhhccccccccccceEE
Confidence 99999999999999999999999999999997653344569999999999999999999986433321 23345899999
Q ss_pred ecccc-cc-----CCCCceEEEEecCCCCcccc-cc--ccCC-c-c--cc-----ccCCCCchhHHHHHHHHHHHH-HHH
Q psy8850 194 FSAHK-IY-----GPKGIGALYIRRNPRTRIEA-QI--HGGG-H-E--YG-----LRSGTLATHQIVGMGEAFRLA-RIE 254 (397)
Q Consensus 194 ~s~~K-~~-----g~~g~g~~~~~~~~~~~~~~-~~--~~~~-~-~--~~-----~~~~~~~~~~~~~l~~al~~~-~~~ 254 (397)
+.+|| ++ |++|.|-+.++.++...+.. .. .++. . . .. ....--++..+.-.++.+..+ .+|
T Consensus 263 lNLHKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~Gs~~il~~a~~YI~~mG~~G 342 (496)
T COG1003 263 LNLHKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYGSASILPIAWAYIRMMGADG 342 (496)
T ss_pred eecccccccCCCCCCCCCCceehHhhccccCCCCcccCCCccccccCCCCccceeeccccCcchHHHHHHHHHHHHhHHH
Confidence 99999 63 34468888888766554432 10 1111 0 0 00 000001112222222333333 457
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEec------CCChHHHHHHhCCcEecccCccCCCCCCh
Q psy8850 255 MKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN------FIEGESLLMAIKDIAVSSGSACTSASLEP 328 (397)
Q Consensus 255 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~i~~~~g~~~~~~~~~~ 328 (397)
+++..+...-++.++..+|+..++ +.-.+.....+-+.++.+ +.+..++.++|...-+.+=...+|..
T Consensus 343 L~~ase~AvLNANYia~rL~~~y~---~~y~~~~~~~HE~ild~r~l~~~~Gv~~~DvAKrLlD~GfHaPT~~FPli--- 416 (496)
T COG1003 343 LKQASEVAVLNANYIARRLKGYYP---VPYTGENRVAHECILDARPLKKETGVRALDVAKRLLDYGFHAPTMYFPLI--- 416 (496)
T ss_pred HHHHHHHHHHhHHHHHHHhhhcCc---cccCCCCcceeEEEeechHhHhhcCCcHHHHHHHHHhcCCCCCcccCccc---
Confidence 888888888899999999987332 322111123455555554 56778999888733232211111100
Q ss_pred hhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHHHhcC
Q psy8850 329 SYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKLRELS 377 (397)
Q Consensus 329 ~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~~ 377 (397)
=.+.+-|-++...+.+++|+++++|.++.++.++.-
T Consensus 417 -------------V~~tLMIEPTEsEsk~eLDrf~dami~I~~Ea~~~~ 452 (496)
T COG1003 417 -------------VAGTLMIEPTESESKEELDRFIDAMIAIREEADAVP 452 (496)
T ss_pred -------------cccceeecCCCCCCHHHHHHHHHHHHHHHHHHHhcc
Confidence 027788888888899999999999999999998864
No 295
>PRK06541 hypothetical protein; Provisional
Probab=99.87 E-value=1.7e-19 Score=171.65 Aligned_cols=334 Identities=13% Similarity=0.093 Sum_probs=204.1
Q ss_pred CCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhh--c
Q psy8850 6 TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFY--K 83 (397)
Q Consensus 6 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~--~ 83 (397)
.+..+|.+.+++++++.... ... . ..+ ..+...++.+.|++++..+.+.++|++||++|++.+++.....+ +
T Consensus 66 lGh~~p~v~~Av~~q~~~~~-~~~--~--~~~-~~~~~~~la~~l~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~ 139 (460)
T PRK06541 66 VGHGRAELAEAAAKQAGTLA-FFP--L--WSY-AHPPAIELAERLAALAPGDLNRVFFTTGGSEAVESAWKLAKQYFKLT 139 (460)
T ss_pred CCCCCHHHHHHHHHHHhhCc-Ccc--c--ccc-CCHHHHHHHHHHHHhCCCCcCEEEEcCCcHHHHHHHHHHHHHHHHhc
Confidence 34678999999999997621 100 0 111 12345667778888765444579999999999999999654332 1
Q ss_pred c--CCCEEEEcCCCChhhHHHHHHHhh-C----C-----cEEEEeccCCCCC-----CC--------HHHHHHHhc----
Q psy8850 84 K--RGKHIITVQTEHKSVLDSIRKLEN-D----G-----FRVTYLKPKNNGL-----IT--------LSQLEEKIC---- 134 (397)
Q Consensus 84 ~--~g~~vl~~~~~~~s~~~~~~~~~~-~----g-----~~v~~v~~~~~~~-----~d--------~~~l~~~i~---- 134 (397)
+ .+.+|+....+|++.......+.. . + ..+..+|.+.... -+ ++.+++.+.
T Consensus 140 g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 219 (460)
T PRK06541 140 GKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFEGP 219 (460)
T ss_pred CCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 1 246677666666555433322210 0 0 1123333322110 11 366777774
Q ss_pred CCceEEEEecccCccccccc----HHHHHHHHHhcCcEEEEeccc-ccCccc----cccCcccccEEEecccc-ccCCC-
Q psy8850 135 SDTILVSVMLVNNEIGVIQP----ILEIGELCRSKGVIFHCDAAQ-AVGKID----INIQNYKVDLMSFSAHK-IYGPK- 203 (397)
Q Consensus 135 ~~~~~v~~~~~~~~tG~~~~----l~~i~~l~~~~gi~livD~a~-~~~~~~----~~~~~~~~d~~~~s~~K-~~g~~- 203 (397)
+++.+|+++.+++++|.+.| +++|.++|++||+++|+|+++ ++|... .......+|++++| | +.++.
T Consensus 220 ~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv~PDivt~g--K~l~~G~~ 297 (460)
T PRK06541 220 DTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGYVPDIITCA--KGITSGYS 297 (460)
T ss_pred CCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhhhhhhcCCCCCEEEec--ccccCCcc
Confidence 35778899988999999888 899999999999999999999 554321 11123358988765 9 55432
Q ss_pred CceEEEEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEe
Q psy8850 204 GIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYIN 283 (397)
Q Consensus 204 g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 283 (397)
.+|+++++++....+.... .........+. +...+++..++++.+.+ +.+.+++.++.++|.+.|++ +....++
T Consensus 298 pigav~~~~~i~~~~~~~~--~~~~~~~T~~g-np~~~aaala~l~~l~~--~~~~~~~~~~g~~l~~~L~~-l~~~~~v 371 (460)
T PRK06541 298 PLGAMIASDRLFEPFLDGP--TMFLHGYTFGG-HPVSAAVALANLDIFER--EGLLDHVRDNEPAFRATLEK-LLDLPIV 371 (460)
T ss_pred ceeEEEEcHHHHHHhhcCC--CccccCCCCCC-CHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHH-hhcCCCe
Confidence 4799998876655443211 00001122332 33445555577777654 35678888999999999987 5322221
Q ss_pred CCCCCCCCceEEEEecCCC-------h--------HHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceE
Q psy8850 284 GDMNNRIPHNLNISFNFIE-------G--------ESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSI 346 (397)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~-------~--------~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~i 346 (397)
... ...+.++.+.|.... . ..+...+. |+.+.+.. .+.+.|
T Consensus 372 ~~v-rg~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~---------------------~g~~~l 429 (460)
T PRK06541 372 GDV-RGDGYFYGIELVKDKATKETFTDDESERLLRGFLSPALFEAGLYCRADD---------------------RGDPVV 429 (460)
T ss_pred EEE-EecceEEEEEEecCcccccCCcchhhhhhHHHHHHHHHHhCCeEEEecC---------------------CCCCEE
Confidence 110 011445556653210 0 12333333 66665310 112689
Q ss_pred EEeeCCCCCHHHHHHHHHHHHHHHHHHHh
Q psy8850 347 RFTIGRFTTEKEIDFTIKLLKMKVKKLRE 375 (397)
Q Consensus 347 Ri~~~~~~~~~~i~~~~~~l~~~~~~~~~ 375 (397)
||+++..+|++|||+++++|.+++.++..
T Consensus 430 rl~Ppl~~t~~~id~~~~~l~~~l~~~~~ 458 (460)
T PRK06541 430 QLAPPLISGQEEFDEIEQILRSVLTEAWA 458 (460)
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999987654
No 296
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.87 E-value=1.7e-20 Score=165.00 Aligned_cols=309 Identities=14% Similarity=0.105 Sum_probs=177.1
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHH--HHHHhHh--------hhccCCCEEEEcCCCChhhHHHHHHHh
Q psy8850 38 TAEKAIEKARNEVAQLIYADPREIIWTSGATESNNL--AIKGAAH--------FYKKRGKHIITVQTEHKSVLDSIRKLE 107 (397)
Q Consensus 38 ~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~--~l~~l~~--------~~~~~g~~vl~~~~~~~s~~~~~~~~~ 107 (397)
...+.+.++|+.+++++|+++++|+...+++-.+.. +..++.. |...+.-+.|++.|.|.-++...+.+
T Consensus 66 G~l~Gipe~r~l~a~llgv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFai~E~~- 144 (425)
T PF12897_consen 66 GGLDGIPEARELFAELLGVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFAITEHF- 144 (425)
T ss_dssp S-SS--HHHHHHHHHHHTS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHHHHHHC-
T ss_pred CccCChHHHHHHHHHHhCCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHHHHHhh-
Confidence 455789999999999999999999987777654322 2222221 22244568899999888777666666
Q ss_pred hCCcEEEEeccCCCCCCCHHHHHHHhcC--CceE-EEEecccCcccccccHHHHHHHHH----hcCcEEEEecccccCcc
Q psy8850 108 NDGFRVTYLKPKNNGLITLSQLEEKICS--DTIL-VSVMLVNNEIGVIQPILEIGELCR----SKGVIFHCDAAQAVGKI 180 (397)
Q Consensus 108 ~~g~~v~~v~~~~~~~~d~~~l~~~i~~--~~~~-v~~~~~~~~tG~~~~l~~i~~l~~----~~gi~livD~a~~~~~~ 180 (397)
|++.+.||.+++| +|.|.+|+++.+ ..|. .|++..+||||.+++-+.+.+++. ..+..|++|++|.+-++
T Consensus 145 --Giemi~VpM~~dG-PDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~vHhL 221 (425)
T PF12897_consen 145 --GIEMIPVPMTEDG-PDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYAVHHL 221 (425)
T ss_dssp --T-EEEEEEEETTE-E-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTTT-BS
T ss_pred --CcEEEecCCCCCC-CCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCceEeec
Confidence 9999999999999 699999999865 4554 489999999999999877777764 56999999999986655
Q ss_pred cc--------ccC-------cccccEEEecccc-ccCCCCceEEEEecCCCCccccccccCCccccccCCCCchhHHHHH
Q psy8850 181 DI--------NIQ-------NYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGM 244 (397)
Q Consensus 181 ~~--------~~~-------~~~~d~~~~s~~K-~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 244 (397)
.- ++. ..+..+...|.+| .+.+.|++++..+.+.++.+...+.- ...|.--..++.-.
T Consensus 222 ~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKITf~GaGva~~aaS~~Nl~~~~~~~~~------~tIgpdKvNQLRHv 295 (425)
T PF12897_consen 222 YDEEPRDALLNILDACAKAGNPDRVYVFASTSKITFPGAGVAFFAASEANLAWIKKHLSV------QTIGPDKVNQLRHV 295 (425)
T ss_dssp SSSSS------HHHHHHHTT-TTSEEEEEESTTTS-TTSS-EEEEE-HHHHHHHHHHHHH------H-S---HHHHHHHH
T ss_pred cccccchhhhHHHHHHHHcCCCCeEEEEecccccccCCcceeeeecCHHHHHHHHHHhcC------ceeCccHHHHHHHH
Confidence 11 110 0134577889999 67777899999997766655443211 11211112222211
Q ss_pred --HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhcC---c-EEEeCCCCCCCCceEEEEecCCChHHHHHHhC--CcEe
Q psy8850 245 --GEAFR-LARIEMKEELKRILFLQKRLYNGLMESIE---E-IYINGDMNNRIPHNLNISFNFIEGESLLMAIK--DIAV 315 (397)
Q Consensus 245 --~~al~-~~~~~~~~~~~~~~~~~~~l~~~l~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~i~~ 315 (397)
....+ -+..+|++..+.++-..+.+.+.|++.+. + -.+..+.+ ++++.+...+-.+..+++..+ ||.+
T Consensus 296 rff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~G---GYFIsld~~~G~AkrvV~lakeAGV~L 372 (425)
T PF12897_consen 296 RFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKG---GYFISLDVLDGTAKRVVELAKEAGVAL 372 (425)
T ss_dssp HHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SB---SS-EEEEESTT-HHHHHHHHHHTTEE-
T ss_pred HHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCC---ceEEEEecCCChHHHHHHHHHHhCcee
Confidence 11222 23344555555555555555555555444 3 34444544 778888887777778887776 9999
Q ss_pred cccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHH
Q psy8850 316 SSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 316 ~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 373 (397)
.+-....| +|.++. .+.|||+++. .+.+|++.+++.+.-|++..
T Consensus 373 T~AGAtfP-----------yg~DP~--D~nIRiAPS~-P~leel~~Am~~~~~cv~la 416 (425)
T PF12897_consen 373 TPAGATFP-----------YGKDPR--DSNIRIAPSY-PSLEELETAMDVFATCVKLA 416 (425)
T ss_dssp --TTTTSG-----------GG--TT--S-EEEE--SS-S-HHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCC-----------CCCCCC--CCcEEecCCC-CCHHHHHHHHHHHHHHHHHH
Confidence 88444443 222221 2789999996 78999999999999887543
No 297
>KOG1359|consensus
Probab=99.87 E-value=6.9e-20 Score=154.29 Aligned_cols=316 Identities=18% Similarity=0.174 Sum_probs=221.7
Q ss_pred CCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCE
Q psy8850 9 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKH 88 (397)
Q Consensus 9 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~ 88 (397)
.+|+++++-+++++.+...+.+-.+-.++ +.+...++..|+++.+-+ +.++.+++-.|+..++-++. .|.|-
T Consensus 82 shPeii~a~~~aleeyGaGlssvrfIcGt--q~iHk~LE~kiAqfh~rE--D~ilypscfdANag~feail----~pedA 153 (417)
T KOG1359|consen 82 SHPEIINAGQKALEEYGAGLSSVRFICGT--QDIHKLLESKIAQFHGRE--DTILYPSCFDANAGAFEAIL----TPEDA 153 (417)
T ss_pred CChHHHHHHHHHHHHhCCCccceeEEecc--hHHHHHHHHHHHHHhCCC--ceEEeccccccchHHHHHhc----Chhhh
Confidence 47899999999999866555543444444 568889999999999966 56666777788888888877 78899
Q ss_pred EEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcC----CceEEEEecccCcccccccHHHHHHHHHh
Q psy8850 89 IITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS----DTILVSVMLVNNEIGVIQPILEIGELCRS 164 (397)
Q Consensus 89 vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~----~~~~v~~~~~~~~tG~~~~l~~i~~l~~~ 164 (397)
|+-.+..|.|....+..+++. +.+|+-+++..+.+ +.++|.-....++.|-+.|+++|.+++++
T Consensus 154 vfSDeLNhASIIdGirLckry------------~h~dv~~l~~~l~~a~k~r~klv~TDg~FSMDGdiaPl~ei~~La~k 221 (417)
T KOG1359|consen 154 VFSDELNHASIIDGIRLCKRY------------RHVDVFDLEHCLISACKMRLKLVVTDGVFSMDGDIAPLEEISQLAKK 221 (417)
T ss_pred hhccccccchhhhhhHHHhhh------------ccchhHHHHHHHHHhhhheEEEEEecceeccCCCcccHHHHHHHHHh
Confidence 999999999999888877532 34567777765543 56788888888999999999999999999
Q ss_pred cCcEEEEecccccCccc---------cccCcccccEEEecccc-ccCCCCceEEEEecCCCCccccccccCCccccccCC
Q psy8850 165 KGVIFHCDAAQAVGKID---------INIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSG 234 (397)
Q Consensus 165 ~gi~livD~a~~~~~~~---------~~~~~~~~d~~~~s~~K-~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (397)
||.++++|++|+.|... ++.. -++|++..++.| ++|..| |+..+++.+...+++.... +-|. +
T Consensus 222 YgaLlfiDecHaTgf~G~tGrGt~E~~~vm-~~vdiinsTLgKAlGga~G-Gyttgp~~li~llrqr~Rp----ylFS-n 294 (417)
T KOG1359|consen 222 YGALLFIDECHATGFFGETGRGTAEEFGVM-GDVDIINSTLGKALGGASG-GYTTGPKPLISLLRQRSRP----YLFS-N 294 (417)
T ss_pred cCcEEEEeecccceeecCCCCChHHHhCCC-CcceehhhhhhhhhcCCCC-CCccCChhHHHHHHhcCCc----eeec-C
Confidence 99999999999855432 2222 278999999999 666665 9999988766555332211 1111 2
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecC-CChHHHHHHhC--
Q psy8850 235 TLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNF-IEGESLLMAIK-- 311 (397)
Q Consensus 235 ~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~-- 311 (397)
+.+...+....++++.+.. -.+..++.+.+.+++++.++. .|+.+.+..- + +..+-+.+ .-+.++.+.|.
T Consensus 295 slppavV~~a~ka~dllm~-s~~~i~~~~a~~qrfr~~me~--aGftIsg~~h---P-I~pv~lGda~lA~~~ad~lLk~ 367 (417)
T KOG1359|consen 295 SLPPAVVGMAAKAYDLLMV-SSKEIQSRQANTQRFREFMEA--AGFTISGASH---P-ICPVMLGDARLASKMADELLKR 367 (417)
T ss_pred CCChhhhhhhHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHh--cCceecCCCC---C-ccceecccHHHHHHHHHHHHhc
Confidence 3333333333456665543 255677888889999999987 8988887432 2 22222222 12334444443
Q ss_pred CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHHH
Q psy8850 312 DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKLR 374 (397)
Q Consensus 312 ~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 374 (397)
|+.+-.-++. ..+.+...||+.++..+++||||++++++.++.+-+.
T Consensus 368 Gi~Vigfs~P----------------vVP~gkariRVqiSAaHt~edid~~i~Af~~vgr~~~ 414 (417)
T KOG1359|consen 368 GIYVIGFSYP----------------VVPKGKARIRVQISAAHTEEDIDRLIEAFSEVGRFLN 414 (417)
T ss_pred CceEEeecCC----------------cCCCCceEEEEEEehhcCHHHHHHHHHHHHHHHHhhc
Confidence 7766532211 1233457799999999999999999999999876554
No 298
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.87 E-value=4.9e-19 Score=167.14 Aligned_cols=327 Identities=15% Similarity=0.133 Sum_probs=199.1
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCC-CCcEEEeCChhHHHHHHHHHhHhhhccC
Q psy8850 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYAD-PREIIWTSGATESNNLAIKGAAHFYKKR 85 (397)
Q Consensus 7 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~-~~~i~~~~g~t~a~~~~l~~l~~~~~~~ 85 (397)
+..+|.+.+++++++.... .... .....+...++.+.|++++.-. .+.++|++||++|++.+++... .+++
T Consensus 55 Gh~~p~v~~ai~~ql~~l~-~~~~-----~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~SGseA~e~AlklAr-~~tg- 126 (425)
T PRK07495 55 GHRHPRVIAAVKAQLDRFT-HTCH-----QVVPYENYVRLAERLNALVPGDFAKKTIFVTTGAEAVENAVKIAR-AATG- 126 (425)
T ss_pred CCCCHHHHHHHHHHHhhcc-Cccc-----CccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHH-HhhC-
Confidence 5678999999999997632 1110 1112335566777888877533 2479999999999999999644 4434
Q ss_pred CCEEEEcCCCChhhHHHHHHH-hh-----CC-----cEEEEeccCCC-CCCC----HHHHHHHhc-----CCceEEEEec
Q psy8850 86 GKHIITVQTEHKSVLDSIRKL-EN-----DG-----FRVTYLKPKNN-GLIT----LSQLEEKIC-----SDTILVSVML 144 (397)
Q Consensus 86 g~~vl~~~~~~~s~~~~~~~~-~~-----~g-----~~v~~v~~~~~-~~~d----~~~l~~~i~-----~~~~~v~~~~ 144 (397)
+.+|+....+|++.......+ .. .+ ..+..+|.+.+ ..++ ++++++.+. +++++|+++.
T Consensus 127 r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~iaavi~EP 206 (425)
T PRK07495 127 RSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVELHGVSVEQSLAALDKLFKADVDPQRVAAIIIEP 206 (425)
T ss_pred CCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCcccccccHHHHHHHHHHHHHhccCCCceEEEEECC
Confidence 356666666565554332221 10 01 12344555421 1122 445576653 3578999998
Q ss_pred ccCcccccc-c---HHHHHHHHHhcCcEEEEecccc-cCccc----cccCcccccEEEecccc-ccCCCCceEEEEecCC
Q psy8850 145 VNNEIGVIQ-P---ILEIGELCRSKGVIFHCDAAQA-VGKID----INIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNP 214 (397)
Q Consensus 145 ~~~~tG~~~-~---l~~i~~l~~~~gi~livD~a~~-~~~~~----~~~~~~~~d~~~~s~~K-~~g~~g~g~~~~~~~~ 214 (397)
++..+|.+. | +++|.++|++||+++|+|++++ +|... .+.....+|++++| | +.++..+|+++++++.
T Consensus 207 v~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~a~~~~gv~pDi~tls--K~l~~G~pigav~~~~~i 284 (425)
T PRK07495 207 VQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKLFAMEHHEVAADLTTMA--KGLAGGFPLAAVTGRAEI 284 (425)
T ss_pred ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCceeecccCCCCCEEeeh--hhhcCCccceEEEEcHHH
Confidence 888888654 3 7899999999999999999987 22211 11122356776665 9 5544458999998776
Q ss_pred CCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceE
Q psy8850 215 RTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNL 294 (397)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 294 (397)
.+.+.+... ....+ .+...+++..++++.+.+ ..+.++.+++.++|++.|++....+..+.... ..+.++
T Consensus 285 ~~~~~~~~~------~~T~~-~~pl~~aaa~a~l~~l~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vr-G~Gl~~ 354 (425)
T PRK07495 285 MDAPGPGGL------GGTYG-GNPLGIAAAHAVLDVIEE--EDLCERANQLGNRLKQRLASLRETVPEIADIR-GPGFMN 354 (425)
T ss_pred HhccCCCCc------CCCCC-CCHHHHHHHHHHHHHHHh--chHHHHHHHHHHHHHHHHHHHHhhCCCeeeee-cCceEE
Confidence 655543221 12223 344445555588888865 34666777777777777765111111111100 114566
Q ss_pred EEEecCCC--------hHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHH
Q psy8850 295 NISFNFIE--------GESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIK 364 (397)
Q Consensus 295 ~~~~~~~~--------~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~ 364 (397)
.+.+...+ ...+...+. |+.+.... ..++.|||.++..++++++|++++
T Consensus 355 ~iel~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~g---------------------~~~~~~r~~Ppl~it~~~id~~~~ 413 (425)
T PRK07495 355 AVEFNDADSGLPSAEFANRVRLKALEKGLILLTCG---------------------VHGNVIRFLAPITIQDDVFAEALD 413 (425)
T ss_pred EEEEecCCCCCccHHHHHHHHHHHHHCCeEEeecC---------------------CCCCEEEEeCCCccCHHHHHHHHH
Confidence 66664321 123333333 66654310 012789999999999999999999
Q ss_pred HHHHHHHHHH
Q psy8850 365 LLKMKVKKLR 374 (397)
Q Consensus 365 ~l~~~~~~~~ 374 (397)
+|.+++++++
T Consensus 414 ~l~~~l~~~~ 423 (425)
T PRK07495 414 ILEASILEAS 423 (425)
T ss_pred HHHHHHHHHh
Confidence 9999998765
No 299
>PRK06105 aminotransferase; Provisional
Probab=99.87 E-value=1.8e-19 Score=171.71 Aligned_cols=334 Identities=13% Similarity=0.094 Sum_probs=204.3
Q ss_pred CCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhc--
Q psy8850 6 TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYK-- 83 (397)
Q Consensus 6 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~-- 83 (397)
.+..+|++.+++.+++.... ... ..+....+...++.+.|++++..+.+.++|++||++|++++++.......
T Consensus 62 lGh~~p~i~~Ai~~q~~~~~-~~~----~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlKlar~~~~~~ 136 (460)
T PRK06105 62 LGFSEQRLVEAAARQMKKLP-FYH----TFSHKSHGPVIDLAEKLVAMAPVPMSKVFFTNSGSEANDTVVKLVWYYNNAL 136 (460)
T ss_pred CCCCCHHHHHHHHHHHHhCC-Cee----cccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhc
Confidence 34678999999999997621 100 11111234556788888888765445799999999999999996542210
Q ss_pred --cCCCEEEEcCCCChhhH-HHHHHHhhC------C---cEEEEeccCCCCC-------------CCHHHHHHHhc----
Q psy8850 84 --KRGKHIITVQTEHKSVL-DSIRKLEND------G---FRVTYLKPKNNGL-------------ITLSQLEEKIC---- 134 (397)
Q Consensus 84 --~~g~~vl~~~~~~~s~~-~~~~~~~~~------g---~~v~~v~~~~~~~-------------~d~~~l~~~i~---- 134 (397)
..+.+|+.....|++.. .+....... + ..+..+|...... ...+++++++.
T Consensus 137 g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~ 216 (460)
T PRK06105 137 GRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRLANELEALILAEGP 216 (460)
T ss_pred CCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCChHHHHHHHHHHHHHHHHHcCC
Confidence 12356666555555443 332211100 1 1122233221100 02466777773
Q ss_pred CCceEEEEecccCccccccc----HHHHHHHHHhcCcEEEEecccc-cCcc----ccccCcccccEEEecccc-ccCC-C
Q psy8850 135 SDTILVSVMLVNNEIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKI----DINIQNYKVDLMSFSAHK-IYGP-K 203 (397)
Q Consensus 135 ~~~~~v~~~~~~~~tG~~~~----l~~i~~l~~~~gi~livD~a~~-~~~~----~~~~~~~~~d~~~~s~~K-~~g~-~ 203 (397)
+++.+|+++.++...|.+.| ++.+.++|++||+++|+|+++. +|.. ..+.....+|+++++ | +.|+ .
T Consensus 217 ~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v~PDi~~~g--K~lggG~~ 294 (460)
T PRK06105 217 DTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGIKPDILVMS--KQLSSSYQ 294 (460)
T ss_pred CceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCCCCCeeeee--cccccCcc
Confidence 46789999999988898877 8999999999999999999984 4432 122334468999887 9 6553 2
Q ss_pred CceEEEEecCCCCccccccc-cCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEE
Q psy8850 204 GIGALYIRRNPRTRIEAQIH-GGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYI 282 (397)
Q Consensus 204 g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 282 (397)
++|+++++++....+.+... .+......+.+. |....++..++|+.+.+ +++.++..++.++|++.|++ +....+
T Consensus 295 P~~av~~~~~i~~~~~~~~~~~~~~~h~~T~~g-npl~~aaa~a~L~~i~~--~~l~~~v~~~g~~l~~~L~~-l~~~~~ 370 (460)
T PRK06105 295 PLSAVLMNEKVYDPIADESGKIGTFGHGFTASG-HPVAAAVALENLAIIEE--RDLVGNAAERGARLQARLRA-LADHPL 370 (460)
T ss_pred cceEEEEcHHHHHHHhcccccCcccccCCCCCC-CHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHH-hhcCCC
Confidence 47888888765444332110 000111223333 34445555578888876 46778888888888888877 432222
Q ss_pred eCCCCCCCCceEEEEecCCC------------hHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEE
Q psy8850 283 NGDMNNRIPHNLNISFNFIE------------GESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRF 348 (397)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~------------~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi 348 (397)
+.. -...+.++.+.+.... ...+...+. |+.+.+. ++.+|+
T Consensus 371 v~~-vrG~Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~~~~~Gvl~~~~------------------------g~~i~l 425 (460)
T PRK06105 371 VGE-VRGVGLIAAVELVADKATKTPFEPPGKVGARANAAAHEHGVISRAM------------------------GDTLAF 425 (460)
T ss_pred eEE-EEecceEEEEEEecCcccCCCCCchhHHHHHHHHHHHHCCeEEEec------------------------CCEEEE
Confidence 211 1112444455553110 123333333 6655431 268999
Q ss_pred eeCCCCCHHHHHHHHHHHHHHHHHHHh
Q psy8850 349 TIGRFTTEKEIDFTIKLLKMKVKKLRE 375 (397)
Q Consensus 349 ~~~~~~~~~~i~~~~~~l~~~~~~~~~ 375 (397)
+++..+|++|||+++++|.++++++++
T Consensus 426 ~Ppl~it~~eid~~~~~l~~~l~~~~~ 452 (460)
T PRK06105 426 CPPLIITAAQVDEMVDRFGRALDDVAA 452 (460)
T ss_pred ECCCccCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999988765
No 300
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.87 E-value=2.2e-19 Score=162.26 Aligned_cols=314 Identities=20% Similarity=0.205 Sum_probs=205.5
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCC
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGK 87 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~ 87 (397)
..+|.|.+++++++.+ ...++. ..+..-++.+.++++++.- +.+.|++|||+|...+++. .+.++++ +
T Consensus 69 H~~p~V~~Av~~~l~~--------G~~fg~-Pte~Ei~~Aell~~~~p~~-e~vrfvnSGTEAtmsAiRl-ARa~TgR-~ 136 (432)
T COG0001 69 HAHPAVVEAVQEQLER--------GLSFGA-PTELEVELAELLIERVPSI-EKVRFVNSGTEATMSAIRL-ARAYTGR-D 136 (432)
T ss_pred CCCHHHHHHHHHHHHh--------cCCCCC-CCHHHHHHHHHHHHhcCcc-cEEEEecchhHHHHHHHHH-HHHhhCC-C
Confidence 4578999999999987 222221 2345667778888888863 4899999999999999994 5566554 7
Q ss_pred EEEEcCCCChhhHHHHHHHhhCC-----------------cEEEEeccCCCCCCCHHHHHHHhcC---CceEEEEecccC
Q psy8850 88 HIITVQTEHKSVLDSIRKLENDG-----------------FRVTYLKPKNNGLITLSQLEEKICS---DTILVSVMLVNN 147 (397)
Q Consensus 88 ~vl~~~~~~~s~~~~~~~~~~~g-----------------~~v~~v~~~~~~~~d~~~l~~~i~~---~~~~v~~~~~~~ 147 (397)
+|+..+.+|+.....+-.-...| -.+..+|+| |++.+++++.+ +..+|+++....
T Consensus 137 kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yN-----D~~al~~~~~~~g~~IAaVIvEPv~g 211 (432)
T COG0001 137 KIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYN-----DLEALEEAFEEYGDDIAAVIVEPVAG 211 (432)
T ss_pred eEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecCC-----CHHHHHHHHHHcCCcEEEEEeccccC
Confidence 88888888887766544321111 123344554 89999998875 688999999998
Q ss_pred ccccccc----HHHHHHHHHhcCcEEEEecccccCcccc----ccCcccccEEEecccc-ccCCCCceEEEEecCCCCcc
Q psy8850 148 EIGVIQP----ILEIGELCRSKGVIFHCDAAQAVGKIDI----NIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRI 218 (397)
Q Consensus 148 ~tG~~~~----l~~i~~l~~~~gi~livD~a~~~~~~~~----~~~~~~~d~~~~s~~K-~~g~~g~g~~~~~~~~~~~~ 218 (397)
..|.+.| ++.|.++|+++|+++|.|++......++ +...+.+|+.++. | +.|+..+|++.++++..+.+
T Consensus 212 n~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~~~gi~PDlttlG--KiIGGGlP~ga~gGr~eiM~~~ 289 (432)
T COG0001 212 NMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQGYYGVEPDLTTLG--KIIGGGLPIGAFGGRAEIMEQL 289 (432)
T ss_pred CCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCcccccccCcCcchhhhh--hhhcCCcceeeeccHHHHHhhh
Confidence 8999888 7899999999999999999987444432 2233367888877 9 77777799999998877755
Q ss_pred ccccccCCccccccCCCC--chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc--CcEEEeCCCCCCCCceE
Q psy8850 219 EAQIHGGGHEYGLRSGTL--ATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESI--EEIYINGDMNNRIPHNL 294 (397)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~--~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--~~~~~~~~~~~~~~~~~ 294 (397)
.+.- .-+..||. |...+++-.++++.+.+. +...+++.++.++|++.|++.. -++.+... ....++
T Consensus 290 ~p~g------~vyqaGT~sgnplamaAG~atl~~l~~~-~~~y~~l~~~~~~L~~gl~~~~~~~g~~~~v~---~~gsm~ 359 (432)
T COG0001 290 APLG------PVYQAGTLSGNPLAMAAGLATLEELMTE-EGVYERLDALGERLAEGLRAAAERHGIPLTVN---RVGSMF 359 (432)
T ss_pred CCCC------CccccCCCCCcHHHHHHHHHHHHHHHhc-ccHHHHHHHHHHHHHHHHHHHHHHhCCCeEEe---eecceE
Confidence 4432 11222332 345666666788877641 1134455555555555554421 23333322 125566
Q ss_pred EEEecCCCh-----------H---HHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHH
Q psy8850 295 NISFNFIEG-----------E---SLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKE 358 (397)
Q Consensus 295 ~~~~~~~~~-----------~---~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~ 358 (397)
.+.|..... . .+...+. ||.+.|+.+ ...-+|.. +++++
T Consensus 360 ~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l~~GV~l~ps~~-----------------------ea~flS~a--hte~d 414 (432)
T COG0001 360 GIFFTEEGVRNYADAKRSDVERFAKFFHHLLNRGVYLAPSQF-----------------------EAGFLSTA--HTEED 414 (432)
T ss_pred EEEecCCCCCCHHHHHhhchHHHHHHHHHHHhCCcccCCccc-----------------------cceeeecc--cCHHH
Confidence 777654211 1 1222221 566655421 22334444 69999
Q ss_pred HHHHHHHHHHHHHHHHh
Q psy8850 359 IDFTIKLLKMKVKKLRE 375 (397)
Q Consensus 359 i~~~~~~l~~~~~~~~~ 375 (397)
||+.++++.++++++.+
T Consensus 415 i~~~~~a~~~~~~~~~~ 431 (432)
T COG0001 415 IDRTLEAADEAFKELAG 431 (432)
T ss_pred HHHHHHHHHHHHHHhhc
Confidence 99999999999888754
No 301
>KOG1360|consensus
Probab=99.86 E-value=1.6e-19 Score=158.18 Aligned_cols=324 Identities=19% Similarity=0.188 Sum_probs=229.1
Q ss_pred CCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCE
Q psy8850 9 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKH 88 (397)
Q Consensus 9 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~ 88 (397)
-+|+|++++.+.+..+.+....-....| ......+++..|+++..-+. .++|++. --|++..+..|... -||-+
T Consensus 186 ~Hp~V~~A~~~tl~~hG~GAGGTRNIsG--~s~~hv~LE~eLA~LHqK~a-ALlFsSC-fVANDstLftLak~--lpgce 259 (570)
T KOG1360|consen 186 RHPEVLDAMHDTLDRHGAGAGGTRNISG--HSKHHVRLEAELADLHQKEA-ALLFSSC-FVANDSTLFTLAKK--LPGCE 259 (570)
T ss_pred CChHHHHHHHHHHHHcCCCcCCccccCC--CCchhhhHHHHHHHHhcCcc-eeeeeee-eeccchHHHHHHHH--CCCcE
Confidence 4799999999999885432211011111 13456778999999998663 4555544 46888888877754 37788
Q ss_pred EEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcC----CceEEEEecccCcccccccHHHHHHHHHh
Q psy8850 89 IITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS----DTILVSVMLVNNEIGVIQPILEIGELCRS 164 (397)
Q Consensus 89 vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~----~~~~v~~~~~~~~tG~~~~l~~i~~l~~~ 164 (397)
|+-.+..|.|....++.. +..=..+..+ |+++|++++.+ .|++|-++.+++++|.++|+++|.+++++
T Consensus 260 i~SD~gNHASMI~GIrns---~v~K~IFrHN-----D~~hL~~lL~~~~~svPKivAFEtVhSM~GavcpleelcDvah~ 331 (570)
T KOG1360|consen 260 IFSDEGNHASMIQGIRNS---RVPKHIFRHN-----DLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCPLEELCDVAHK 331 (570)
T ss_pred EeccccchHHHHHHhhhc---CCcceeeccC-----CHHHHHHHHHhCCCCCCceEEEeeeeccCCCcCCHHHHHHHHHH
Confidence 888888888888777655 4433333333 89999999864 57899999999999999999999999999
Q ss_pred cCcEEEEecccccCccc--------cccCcccccEEEeccccccCCCCceEEEEecCCCCccccccccCCccccccCCCC
Q psy8850 165 KGVIFHCDAAQAVGKID--------INIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTL 236 (397)
Q Consensus 165 ~gi~livD~a~~~~~~~--------~~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (397)
||++-++|++|++|... -+-..-..|++++++.|.+|-.| |++.....+.+-++.+..| .-|+.+-
T Consensus 332 yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGcVG-GYIAat~~LvDmiRSyAaG----FIFTTSL- 405 (570)
T KOG1360|consen 332 YGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGCVG-GYIAATRKLVDMIRSYAAG----FIFTTSL- 405 (570)
T ss_pred hCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhccccc-ceehhhhhHHHHHHHhcCc----eEEecCC-
Confidence 99999999999855432 22222268999999999988876 9999888777777766655 2233333
Q ss_pred chhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCC-hHHHHHHhC---
Q psy8850 237 ATHQIVGMGEAFRLARI-EMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIE-GESLLMAIK--- 311 (397)
Q Consensus 237 ~~~~~~~l~~al~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~--- 311 (397)
+...+.+...+++.+.. +-..+++..+++..++++.|.+ .|+.+...+ .+++.+.+.+.. ..++.+.|.
T Consensus 406 PP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~--~GiPVi~~p----SHIiPv~vgda~l~~~~sd~Li~~h 479 (570)
T KOG1360|consen 406 PPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLME--LGIPVIPNP----SHIIPVRVGDAALAKQASDILISKH 479 (570)
T ss_pred ChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHH--cCCcccCCC----cceeeeeccCHHHHHHHHHHHHHhc
Confidence 33444444467777754 3456677788889999999998 688887665 356566654322 233333332
Q ss_pred CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHHH
Q psy8850 312 DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKLR 374 (397)
Q Consensus 312 ~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 374 (397)
+|.+..-.+.. ...+...+||.++..+|++.++.+++.|..++.++.
T Consensus 480 ~iYvQaINyPT----------------V~rG~E~LRiaPTP~HT~~mm~~lv~~l~~vw~~v~ 526 (570)
T KOG1360|consen 480 NIYVQAINYPT----------------VARGTERLRIAPTPHHTPQMMNILVNALLDVWNEVG 526 (570)
T ss_pred CeEEEeccCCc----------------ccccceeeecCCCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 67665432111 123446799999999999999999999999988764
No 302
>PRK07678 aminotransferase; Validated
Probab=99.86 E-value=2.1e-19 Score=170.88 Aligned_cols=336 Identities=13% Similarity=0.130 Sum_probs=202.5
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhcc--
Q psy8850 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKK-- 84 (397)
Q Consensus 7 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~-- 84 (397)
+..+|+|.+++.+++......+ ..+ ..+...++.+.|+++++.. +.++|++||++|++.+++.....+..
T Consensus 62 Gh~~p~v~~ai~~q~~~~~~~~------~~~-~~~~~~~lae~l~~~~~~~-~~v~f~~sGseA~e~AlklAr~~t~~~g 133 (451)
T PRK07678 62 GYGRKELAEAAYEQLKTLSYFP------LTQ-SHEPAIKLAEKLNEWLGGE-YVIFFSNSGSEANETAFKIARQYHAQKG 133 (451)
T ss_pred CCCCHHHHHHHHHHHHhcCccc------ccc-CCHHHHHHHHHHHHhCCCC-CEEEEeCCcHHHHHHHHHHHHHHHHhcC
Confidence 5678999999999987632111 011 1234567888888887653 47999999999999999965543211
Q ss_pred --CCCEEEEcCCCChhhHHHHHHHh-hC---------CcEEEEeccCCCCCC---------C---HHHHHHHhc----CC
Q psy8850 85 --RGKHIITVQTEHKSVLDSIRKLE-ND---------GFRVTYLKPKNNGLI---------T---LSQLEEKIC----SD 136 (397)
Q Consensus 85 --~g~~vl~~~~~~~s~~~~~~~~~-~~---------g~~v~~v~~~~~~~~---------d---~~~l~~~i~----~~ 136 (397)
.+.+|+.....|++......... .. ...+..+|.+..... + ++.+++.+. ++
T Consensus 134 ~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 213 (451)
T PRK07678 134 EPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECVKEIDRVMTWELSET 213 (451)
T ss_pred CCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccccccccCChHHHHHHHHHHHHHHHHhcCCCc
Confidence 23567776666665543322221 00 012233333221111 1 233566663 46
Q ss_pred ceEEEEecccCccccccc----HHHHHHHHHhcCcEEEEecccc-cCccc----cccCcccccEEEecccc-ccCC-CCc
Q psy8850 137 TILVSVMLVNNEIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKID----INIQNYKVDLMSFSAHK-IYGP-KGI 205 (397)
Q Consensus 137 ~~~v~~~~~~~~tG~~~~----l~~i~~l~~~~gi~livD~a~~-~~~~~----~~~~~~~~d~~~~s~~K-~~g~-~g~ 205 (397)
+.+|+++.++...|.+.| ++++.++|++||+++|+|+++. +|..- .+.....+|+++++ | +.|+ ..+
T Consensus 214 iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~gv~PDivt~g--K~lggG~~Pi 291 (451)
T PRK07678 214 IAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAFGFMNYGVKPDIITMA--KGITSAYLPL 291 (451)
T ss_pred eEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchhHHHHhcCCCCCEEEee--cccccCCcce
Confidence 889999999988888876 7899999999999999999985 43321 22233468999887 9 6554 358
Q ss_pred eEEEEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCC
Q psy8850 206 GALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGD 285 (397)
Q Consensus 206 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 285 (397)
|.++++++..+.+.+....+......+.+. |...+++..++|+.+.+ +.+.++..++.++|++.|++.+....++..
T Consensus 292 ~av~~~~~i~~~~~~~~~~~~~~h~~T~~g-np~~~aaa~a~l~~l~~--~~~~~~~~~~g~~l~~~l~~~~~~~~~v~~ 368 (451)
T PRK07678 292 SATAVKKEIYEAFKGKGEYEHFRHVNTFGG-NPAACALALKNLEIMEN--ENLIERSAQLGELLLEQLKEELGEHPLVGD 368 (451)
T ss_pred eEEEEcHHHHHHHhccCcccccccCCCCCc-CHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 999999776554432110000111223333 34555555588888765 356677777777777777542222111111
Q ss_pred CCCCCCceEEEEecCC-------C---hHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCC
Q psy8850 286 MNNRIPHNLNISFNFI-------E---GESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRF 353 (397)
Q Consensus 286 ~~~~~~~~~~~~~~~~-------~---~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~ 353 (397)
....+.++.+.+... + ...+...+. |+.+.+.....+ ..++.|||+++..
T Consensus 369 -vrg~Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~l~~~Gv~~~~~g~~v~-----------------~~~~~lrl~Ppl~ 430 (451)
T PRK07678 369 -IRGKGLLVGIELVNDKETKEPADNDKVASVVAACKEKGLIIGKNGDTVA-----------------GYNNVLTLSPPLV 430 (451)
T ss_pred -EEeeceEEEEEEecCCcccCcCchHHHHHHHHHHHHCCcEEeecCcccc-----------------CCCCEEEEECCCc
Confidence 011144555555311 1 123444443 776653211000 1137899999999
Q ss_pred CCHHHHHHHHHHHHHHHHHH
Q psy8850 354 TTEKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 354 ~~~~~i~~~~~~l~~~~~~~ 373 (397)
+|++|||+++++|.++++++
T Consensus 431 it~~eid~~~~~l~~~l~~~ 450 (451)
T PRK07678 431 ISSEEIAFIVGTLKTALERI 450 (451)
T ss_pred CCHHHHHHHHHHHHHHHHhc
Confidence 99999999999999998765
No 303
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.86 E-value=6.2e-19 Score=167.78 Aligned_cols=326 Identities=16% Similarity=0.137 Sum_probs=200.9
Q ss_pred CCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCC-CCcEEEeCChhHHHHHHHHHhHhhhcc
Q psy8850 6 TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYAD-PREIIWTSGATESNNLAIKGAAHFYKK 84 (397)
Q Consensus 6 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~-~~~i~~~~g~t~a~~~~l~~l~~~~~~ 84 (397)
.+..+|+|.+++.+++.... .... .....+...++.+.|++.+... .+.++|++||++|++.+++.. +.+++
T Consensus 70 lGh~~p~v~~ai~~q~~~~~-~~~~-----~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~AlklA-r~~tg 142 (443)
T PRK06058 70 VGNSAPRVVEAVREQVARFT-HTCF-----MVTPYEGYVAVAEQLNRLTPGDHEKRSALFNSGAEAVENAVKIA-RSYTG 142 (443)
T ss_pred cCCCCHHHHHHHHHHHHhcc-Cccc-----cccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHH-HHhhC
Confidence 34678999999999997621 1111 1111245567778888887532 247999999999999999954 34434
Q ss_pred CCCEEEEcCCCChhhHHHHHHHhh------CCc-----EEEEeccCCCC-C-----C--------CHHHHHHHhc-CCce
Q psy8850 85 RGKHIITVQTEHKSVLDSIRKLEN------DGF-----RVTYLKPKNNG-L-----I--------TLSQLEEKIC-SDTI 138 (397)
Q Consensus 85 ~g~~vl~~~~~~~s~~~~~~~~~~------~g~-----~v~~v~~~~~~-~-----~--------d~~~l~~~i~-~~~~ 138 (397)
+ ++|+....+|++.......+.. .++ .+..+|..... . . .++.+++.+. ++++
T Consensus 143 r-~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iA 221 (443)
T PRK06058 143 R-QAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQVGADNLA 221 (443)
T ss_pred C-CeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHHHHHHHhhCCCceE
Confidence 4 6777777777766644332210 011 12223321100 0 0 1233444443 5788
Q ss_pred EEEEecccCccccccc----HHHHHHHHHhcCcEEEEecccc-cCccc----cccCcccccEEEecccc-ccCCCCceEE
Q psy8850 139 LVSVMLVNNEIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKID----INIQNYKVDLMSFSAHK-IYGPKGIGAL 208 (397)
Q Consensus 139 ~v~~~~~~~~tG~~~~----l~~i~~l~~~~gi~livD~a~~-~~~~~----~~~~~~~~d~~~~s~~K-~~g~~g~g~~ 208 (397)
+|+++.++...|.+.| +++|.++|++||+++|.|+++. +|... .......+|+++++ | +.|+..+|++
T Consensus 222 avi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~fa~~~~gv~PDiv~~g--K~l~~G~Pi~av 299 (443)
T PRK06058 222 AVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWFACEHEGIVPDLITTA--KGIAGGLPLSAV 299 (443)
T ss_pred EEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhhHHHhcCCCCCEEEEc--ccccCCCccEEE
Confidence 9999988877787765 7999999999999999999986 32211 12223467999887 9 6554458999
Q ss_pred EEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCC
Q psy8850 209 YIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNN 288 (397)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 288 (397)
+++++..+.+.....+ .+.+ .|...+++..++|+.+.+ .++.++..++.++|.+.|++......++.+- .
T Consensus 300 ~~~~~i~~~~~~~~~~------~T~~-gnpl~~aaa~a~L~~~~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v-r 369 (443)
T PRK06058 300 TGRAEIMDAPHPGGLG------GTYG-GNPVACAAALAAIETIEE--DDLVARARQIEALMTDRLRALAAEDDRIGDV-R 369 (443)
T ss_pred EEcHHHHhhccCCCCC------CCCC-CCHHHHHHHHHHHHHHHH--cCHHHHHHHHHHHHHHHHHHHHhhCCcEEee-e
Confidence 9987765555433221 2233 344555565578887765 3567788888888888887621111222111 1
Q ss_pred CCCceEEEEecCC----Ch----HHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHH
Q psy8850 289 RIPHNLNISFNFI----EG----ESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKE 358 (397)
Q Consensus 289 ~~~~~~~~~~~~~----~~----~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~ 358 (397)
..+.++.+.+... +. ..+...+. |+.+.++..+ +++||+.++..+|+++
T Consensus 370 g~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~~~~~~~~---------------------~~~lr~~Ppl~~t~~~ 428 (443)
T PRK06058 370 GRGAMIAIELVKPGTTEPDAELTKALAAAAHAAGVIVLTCGTY---------------------GNVIRLLPPLVIGDEL 428 (443)
T ss_pred ccceEEEEEEecCCCCCCcHHHHHHHHHHHHHCCeEEeccCCC---------------------CCEEEEECCCccCHHH
Confidence 1144555555321 11 22333333 7777543110 2789999999999999
Q ss_pred HHHHHHHHHHHHHH
Q psy8850 359 IDFTIKLLKMKVKK 372 (397)
Q Consensus 359 i~~~~~~l~~~~~~ 372 (397)
||+++++|.+++++
T Consensus 429 i~~~~~~l~~~l~~ 442 (443)
T PRK06058 429 LREGLDVLEAALAD 442 (443)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999865
No 304
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.86 E-value=5.4e-19 Score=167.52 Aligned_cols=331 Identities=15% Similarity=0.128 Sum_probs=202.5
Q ss_pred CCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhc--
Q psy8850 6 TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYK-- 83 (397)
Q Consensus 6 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~-- 83 (397)
.+..+|.+.+++.+++....-. . .+.. ..+...++.+.|++++....+.++|++||++|++.+++....+..
T Consensus 60 lGh~~p~v~~ai~~ql~~l~~~-~--~~~~---~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~AlklAr~~~~~~ 133 (442)
T PRK13360 60 AGHGRPEIVEAVRAQAGELDYA-P--AFQM---GHPKAFELANRIAEIAPGGLNHVFFTNSGSESVDTALKIALAYHRAR 133 (442)
T ss_pred cCCCCHHHHHHHHHHHHhCCCc-c--cCCc---CCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhc
Confidence 3567899999999998763211 1 1111 123456788888888753345799999999999999996553321
Q ss_pred --cCCCEEEEcCCCChhhHHH-HHHHhh------CC---cEEEEeccCCC---CCC----------CHHHHHHHhc----
Q psy8850 84 --KRGKHIITVQTEHKSVLDS-IRKLEN------DG---FRVTYLKPKNN---GLI----------TLSQLEEKIC---- 134 (397)
Q Consensus 84 --~~g~~vl~~~~~~~s~~~~-~~~~~~------~g---~~v~~v~~~~~---~~~----------d~~~l~~~i~---- 134 (397)
..+.+|+....+|++.... ...... .+ ..+..+|.... ... .++++++++.
T Consensus 134 g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~ 213 (442)
T PRK13360 134 GEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADELERLVTLHDA 213 (442)
T ss_pred CCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHHHHHHHHHHHHHHhcCC
Confidence 1235777777766665432 211110 00 12333443311 001 1457777774
Q ss_pred CCceEEEEecccCccccccc----HHHHHHHHHhcCcEEEEeccc-ccCcc----ccccCcccccEEEecccc-ccCC-C
Q psy8850 135 SDTILVSVMLVNNEIGVIQP----ILEIGELCRSKGVIFHCDAAQ-AVGKI----DINIQNYKVDLMSFSAHK-IYGP-K 203 (397)
Q Consensus 135 ~~~~~v~~~~~~~~tG~~~~----l~~i~~l~~~~gi~livD~a~-~~~~~----~~~~~~~~~d~~~~s~~K-~~g~-~ 203 (397)
+++.+|+++.++...|.+.| +++|.++|++||+++|+|+++ ++|.. ..+.....+|+++++ | +.|+ .
T Consensus 214 ~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDivt~g--K~l~gG~~ 291 (442)
T PRK13360 214 STIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGVTPDLLTCA--KGLTNGAI 291 (442)
T ss_pred CcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCceeeee--eccccCcc
Confidence 45789999999999999988 899999999999999999998 44432 122233468988776 9 5443 3
Q ss_pred CceEEEEecCCCCccccccccC-CccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEE
Q psy8850 204 GIGALYIRRNPRTRIEAQIHGG-GHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYI 282 (397)
Q Consensus 204 g~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 282 (397)
.+|.++++++..+.+....... .....++.+ .+...+++..++++.+.+ ..+.++..++.+++++.|++ +.....
T Consensus 292 P~gav~~~~~i~~~~~~~~~~~~~~~~~~T~~-g~pl~~aaa~a~L~~l~~--~~l~~~~~~~g~~l~~~l~~-l~~~~~ 367 (442)
T PRK13360 292 PMGAVFVSSEIHDAFMQGPEAGIEFFHGYTYS-GHPLACAAALATLDLYER--EGLLTRAARLAPYWEDALHS-LRDAPH 367 (442)
T ss_pred ceEEEEEcHHHHHHhhcCCccccccccCCCCC-CCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHH-hhcCCC
Confidence 4788888866544332110000 001122333 355566666688888765 35677888888888888876 432211
Q ss_pred eCCCCCCCCceEEEEecCC------ChHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCC
Q psy8850 283 NGDMNNRIPHNLNISFNFI------EGESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFT 354 (397)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~ 354 (397)
+.+. ...+.+..+.+... ...++...+. |+.+... ++.+||+++..+
T Consensus 368 v~~v-rG~Gl~~~~~l~~~~~~~~~~~~~~~~~l~~~Gvl~~~~------------------------~~~lr~~Ppl~~ 422 (442)
T PRK13360 368 VIDI-RNLGLVGAVELAPRDGKPGKRAYEVFLKCFEKGLMIRYT------------------------GDILALSPPLII 422 (442)
T ss_pred eeee-eccceEEEEEEecCCCCcchhHHHHHHHHHHCCcEEEec------------------------CCEEEEeCCCcc
Confidence 1110 01122333444211 1224444443 6666432 267999999999
Q ss_pred CHHHHHHHHHHHHHHHHHH
Q psy8850 355 TEKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 355 ~~~~i~~~~~~l~~~~~~~ 373 (397)
|++|||+++++|.++++++
T Consensus 423 t~~eid~~~~~l~~~l~~~ 441 (442)
T PRK13360 423 EEAQIDELFDILAQALKET 441 (442)
T ss_pred CHHHHHHHHHHHHHHHHHh
Confidence 9999999999999998654
No 305
>PRK15029 arginine decarboxylase; Provisional
Probab=99.86 E-value=3.4e-19 Score=175.04 Aligned_cols=222 Identities=15% Similarity=0.114 Sum_probs=172.1
Q ss_pred HHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCC-
Q psy8850 42 AIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN- 120 (397)
Q Consensus 42 ~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~- 120 (397)
.+.++++.++++||++ ...++++|+|.++.+++.+++ ++||+|+++.++|.|...++... |+++++++..-
T Consensus 206 ~I~eAq~~aA~~fgA~-~t~FlvNGST~gn~a~i~a~~----~~gd~Vlv~RN~HKSv~~al~L~---ga~Pvyl~P~~~ 277 (755)
T PRK15029 206 AFGESEKYAARVFGAD-RSWSVVVGTSGSNRTIMQACM----TDNDVVVVDRNCHKSIEQGLILT---GAKPVYMVPSRN 277 (755)
T ss_pred HHHHHHHHHHHHhCCC-cEEEEeCChhHHHHHHHHHhc----CCCCEEEeecccHHHHHHHHHHc---CCeEEEeccccc
Confidence 6889999999999997 479999999999999999988 89999999999999999998888 99999996542
Q ss_pred -C---CCCC-----HHHHHHHhcCC----------ceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCc--
Q psy8850 121 -N---GLIT-----LSQLEEKICSD----------TILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGK-- 179 (397)
Q Consensus 121 -~---~~~d-----~~~l~~~i~~~----------~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~-- 179 (397)
. +.++ ++.+++++.+. ++++++++|++ -|.+.+++.|+++|+++|++|++|+||+...
T Consensus 278 ~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F 356 (755)
T PRK15029 278 RYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARF 356 (755)
T ss_pred ccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC-cceeeCHHHHHHHHHhcCCeEEEECcccccccc
Confidence 2 3455 89999988542 23888888754 5999999999999999999999999998322
Q ss_pred ---ccc--cc-----Cccccc-EEEecccc-ccCCCCceEEEEecC--CCC--ccccccccCCccccccCCCCchhHHHH
Q psy8850 180 ---IDI--NI-----QNYKVD-LMSFSAHK-IYGPKGIGALYIRRN--PRT--RIEAQIHGGGHEYGLRSGTLATHQIVG 243 (397)
Q Consensus 180 ---~~~--~~-----~~~~~d-~~~~s~~K-~~g~~g~g~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (397)
.+. .+ ...++| +++.|.|| +.+....+++.++.. ... ++...+ .-+.+++|++..+++
T Consensus 357 ~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~~~~id~~r~~~~l------~~~qSTSPSY~LmAS 430 (755)
T PRK15029 357 NPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQAY------MMHATTSPLYAICAS 430 (755)
T ss_pred CccccccccccccccccCCCceEEEEchhhcccchhhhhhheeCCCccccCHHHHHHHH------HHHcCCCcHHHHHHH
Confidence 121 11 114788 99999999 777777788888654 111 222222 124456788889999
Q ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhhcCc
Q psy8850 244 MGEAFRLARI-EMKEELKRILFLQKRLYNGLMESIEE 279 (397)
Q Consensus 244 l~~al~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~ 279 (397)
+..+..++.. .-.+..++..+.+..+++.+.+ +++
T Consensus 431 LD~ar~~m~~~~G~~l~~~~i~~~~~~r~~l~~-~~~ 466 (755)
T PRK15029 431 NDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMAR-LYK 466 (755)
T ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHh-ccc
Confidence 9888888764 4566777777888888888877 543
No 306
>PRK06062 hypothetical protein; Provisional
Probab=99.86 E-value=4.8e-19 Score=168.30 Aligned_cols=327 Identities=16% Similarity=0.137 Sum_probs=199.8
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCC
Q psy8850 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRG 86 (397)
Q Consensus 7 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g 86 (397)
+..+|.|.+++.+++..... .. . . ...+...++.+.|+++.....+.++|++||++|++.+++... .+++ +
T Consensus 68 Gh~~p~v~~Ai~~q~~~~~~-~~---~--~-~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~AlklAr-~~tg-r 138 (451)
T PRK06062 68 GHQHPKVVAAIQEQAARLCT-VA---P--A-HANDARSEAARLIAERAPGDLSKVFFTNGGADANEHAVRMAR-LHTG-R 138 (451)
T ss_pred CCCCHHHHHHHHHHHHhcCC-cC---C--c-cCCHHHHHHHHHHHHhCCCCCCEEEEcCChHHHHHHHHHHHH-HhhC-C
Confidence 46789999999999876221 00 1 1 123455778888888875444589999999999999999644 4434 3
Q ss_pred CEEEEcCCCChhhH-HHHHHHhhC---C-----cEEEEeccCCCCC------CC-------HHHHHHHhc----CCceEE
Q psy8850 87 KHIITVQTEHKSVL-DSIRKLEND---G-----FRVTYLKPKNNGL------IT-------LSQLEEKIC----SDTILV 140 (397)
Q Consensus 87 ~~vl~~~~~~~s~~-~~~~~~~~~---g-----~~v~~v~~~~~~~------~d-------~~~l~~~i~----~~~~~v 140 (397)
.+|+.....|++.. .+....... . ..+..++.+.... -| ++++++++. +++.+|
T Consensus 139 ~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAav 218 (451)
T PRK06062 139 PKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIELEGPSTIAAI 218 (451)
T ss_pred ceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHhcCCCceEEE
Confidence 56666665555554 443332110 0 0122222221110 12 577787774 457899
Q ss_pred EEecccCccccccc----HHHHHHHHHhcCcEEEEecccc-cCcc----ccccCcccccEEEecccc-ccCC-CCceEEE
Q psy8850 141 SVMLVNNEIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKI----DINIQNYKVDLMSFSAHK-IYGP-KGIGALY 209 (397)
Q Consensus 141 ~~~~~~~~tG~~~~----l~~i~~l~~~~gi~livD~a~~-~~~~----~~~~~~~~~d~~~~s~~K-~~g~-~g~g~~~ 209 (397)
+++.++...|.+.| ++++.++|++||+++|+|++++ +|.. ..+.....+|+++++ | +.|+ ..+|.++
T Consensus 219 iiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~~~~gv~PDi~t~g--K~lggG~~Pigav~ 296 (451)
T PRK06062 219 LLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWFAIEHFGVVPDLITFA--KGVNSGYVPLGGVA 296 (451)
T ss_pred EEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHHHHHhcCCCCCeeeec--hhhhcCCcCcEEEE
Confidence 99999999999888 8999999999999999999987 3222 112223468988876 9 6543 2578888
Q ss_pred EecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhhhcCcEEEeCCCCC
Q psy8850 210 IRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQ-KRLYNGLMESIEEIYINGDMNN 288 (397)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~-~~l~~~l~~~~~~~~~~~~~~~ 288 (397)
++++..+.+... ......+.+. +...+++..++|+.+.+ ..+.++..++. ++|++.|++......++.. -.
T Consensus 297 ~~~~i~~~~~~~----~~~~~~T~~g-npl~~Aaa~a~L~~l~~--~~l~~~~~~~G~~~l~~~L~~l~~~~~~v~~-vr 368 (451)
T PRK06062 297 ISEAIAATFADR----PYPGGLTYSG-HPLACAAAVATINAMEE--EGIVENAARIGAEVLGPGLRELAERHPSVGE-VR 368 (451)
T ss_pred EcHHHHHHhccC----CCCCCCCCCC-CHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHHhcCCcEEe-Ee
Confidence 887654444321 0112223333 34555555688888765 34566666665 4666666551111111111 00
Q ss_pred CCCceEEEEecCCC---------------hHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeC
Q psy8850 289 RIPHNLNISFNFIE---------------GESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIG 351 (397)
Q Consensus 289 ~~~~~~~~~~~~~~---------------~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~ 351 (397)
..+.++.+.+.... ...+...+. |+.+.+ .++.+|++++
T Consensus 369 G~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gvl~~~------------------------~~~~lrl~pp 424 (451)
T PRK06062 369 GLGVFWALELVADRETREPLAPYGASSAAMAAVKAACKERGLLPFV------------------------NGNRIHVVPP 424 (451)
T ss_pred ccccEEEEEEcccccccCCCcccchhhHHHHHHHHHHHHCCcEEee------------------------cCCEEEEECC
Confidence 11445555553110 123333333 554432 1378999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHhc
Q psy8850 352 RFTTEKEIDFTIKLLKMKVKKLREL 376 (397)
Q Consensus 352 ~~~~~~~i~~~~~~l~~~~~~~~~~ 376 (397)
..++++|||++++++.++++++..-
T Consensus 425 l~~t~~eid~~~~~l~~~l~~~~~~ 449 (451)
T PRK06062 425 CTVTEDEVREGLAILDAALAVADAA 449 (451)
T ss_pred ccCCHHHHHHHHHHHHHHHHHhhhc
Confidence 9999999999999999999887653
No 307
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.86 E-value=9.7e-19 Score=166.17 Aligned_cols=328 Identities=15% Similarity=0.187 Sum_probs=203.2
Q ss_pred CCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccC
Q psy8850 6 TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKR 85 (397)
Q Consensus 6 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~ 85 (397)
.+..+|.|.+++++++.... .... .+...+...++.+.|++..+...+.+.|++||++|++.+++... .+++
T Consensus 67 lGh~~p~i~~Ai~~ql~~~~-~~~~-----~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr-~~tg- 138 (457)
T PRK05639 67 TGYSHPKLVKAVQEQVALIQ-HSMI-----GYTHSERAIRVAEKLAEISPIENPKVLFGLSGSDAVDMAIKVSK-FSTR- 138 (457)
T ss_pred cCCCCHHHHHHHHHHHHhcc-cccc-----CccCCHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHHHHHHHH-HhcC-
Confidence 34678999999999987621 1111 11112345678888888876444579999999999999999644 4434
Q ss_pred CCEEEEcCCCChhhH-HHHHHHhh-----CCc-----EEEEeccCCCCC--------CCH--------HHHHHHh-----
Q psy8850 86 GKHIITVQTEHKSVL-DSIRKLEN-----DGF-----RVTYLKPKNNGL--------ITL--------SQLEEKI----- 133 (397)
Q Consensus 86 g~~vl~~~~~~~s~~-~~~~~~~~-----~g~-----~v~~v~~~~~~~--------~d~--------~~l~~~i----- 133 (397)
+.+|+....+|++.. .+...... .+. .+..+|.+.... -+. +.+++.+
T Consensus 139 r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~ 218 (457)
T PRK05639 139 RPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVV 218 (457)
T ss_pred CCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhhc
Confidence 356666665555544 33332210 011 244555542110 022 3455544
Q ss_pred -cCCceEEEEecccCccccccc----HHHHHHHHHhcCcEEEEecccc-cCcc----ccccCcccccEEEecccc-ccCC
Q psy8850 134 -CSDTILVSVMLVNNEIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKI----DINIQNYKVDLMSFSAHK-IYGP 202 (397)
Q Consensus 134 -~~~~~~v~~~~~~~~tG~~~~----l~~i~~l~~~~gi~livD~a~~-~~~~----~~~~~~~~~d~~~~s~~K-~~g~ 202 (397)
.+++.+|+++.++...|.+.| ++++.++|++||+++|+|++++ +|.. ..+.....+|+++++ | +.|+
T Consensus 219 ~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv~~g--K~l~gG 296 (457)
T PRK05639 219 PPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWFASEWFEVKPDLIIFG--KGVASG 296 (457)
T ss_pred CCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCchHHHHHhcCCCCCEEEec--hhhcCC
Confidence 346889999999998898776 7899999999999999999987 2211 112223468999966 9 6655
Q ss_pred CCceEEEEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEE
Q psy8850 203 KGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYI 282 (397)
Q Consensus 203 ~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 282 (397)
.++|+++++++..+... +. ..++.+. +...+++..++++.+.+ ..+.++..++.++|++.|++......+
T Consensus 297 ~pi~av~~~~~i~~~~~-----~~--~~~T~~g-~p~~~aaa~a~l~~l~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~ 366 (457)
T PRK05639 297 MGLSGVIGRKELMDLTS-----GS--ALLTPAA-NPVISAAAEATLEIIEE--ENLLKNALKVGEFIKKRLLEMKESFEV 366 (457)
T ss_pred CcceeEEehHHHHhhcC-----CC--cccCCCc-CHHHHHHHHHHHHHHHH--ccHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 66899999877655211 11 1123333 44455555578887765 456677777788888887762122222
Q ss_pred eCCCCCCCCceEEEEecCC---C----hHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCC
Q psy8850 283 NGDMNNRIPHNLNISFNFI---E----GESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRF 353 (397)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~---~----~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~ 353 (397)
..+- ...+.++.+.+... . ...+...+. |+.+.+.. ..++.||+.++..
T Consensus 367 ~~~V-rG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~g---------------------~~~~~lr~~Ppl~ 424 (457)
T PRK05639 367 IGDV-RGKGLMIGVEIVKENGKPDPELTGKICWRAFELGLILPSYG---------------------MFGNVIRITPPLV 424 (457)
T ss_pred EEee-ccceeEEEEEEecCCCCCCHHHHHHHHHHHHhCCeEEeecC---------------------CCCCEEEEeCCCc
Confidence 2211 11144555555321 1 123333333 66664320 1137899999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHh
Q psy8850 354 TTEKEIDFTIKLLKMKVKKLRE 375 (397)
Q Consensus 354 ~~~~~i~~~~~~l~~~~~~~~~ 375 (397)
+|++|+|+++++|.++++.+.+
T Consensus 425 it~~~id~~~~~l~~~l~~~~~ 446 (457)
T PRK05639 425 ITKEIAEKGLEIMERAIKDALA 446 (457)
T ss_pred cCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999987743
No 308
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.86 E-value=5.3e-19 Score=167.12 Aligned_cols=324 Identities=16% Similarity=0.151 Sum_probs=196.9
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCC-CCcEEEeCChhHHHHHHHHHhHhhhccC
Q psy8850 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYAD-PREIIWTSGATESNNLAIKGAAHFYKKR 85 (397)
Q Consensus 7 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~-~~~i~~~~g~t~a~~~~l~~l~~~~~~~ 85 (397)
+..+|.+.+++.+++.... .... .....+...++.+.|+++.... .+.++|++||++|++.+++... .++++
T Consensus 55 Gh~~p~v~~ai~~ql~~~~-~~~~-----~~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~AlklAr-~~tgr 127 (421)
T PRK09792 55 GHRHPDLVAAVEQQLQQFT-HTAY-----QIVPYESYVTLAEKINALAPVSGQAKTAFFTTGAEAVENAVKIAR-AHTGR 127 (421)
T ss_pred CCCCHHHHHHHHHHHHhcc-Cccc-----CccCCHHHHHHHHHHHHhCCCCCCceEEEeCChHHHHHHHHHHHH-HhcCC
Confidence 4678999999999988622 1111 1111234456777777776532 2479999999999999999654 44343
Q ss_pred CCEEEEcCCCChhhH-HHHHHHhh-----CCc-----EEEEeccCC--CCC---CCHHHHHHHhc-----CCceEEEEec
Q psy8850 86 GKHIITVQTEHKSVL-DSIRKLEN-----DGF-----RVTYLKPKN--NGL---ITLSQLEEKIC-----SDTILVSVML 144 (397)
Q Consensus 86 g~~vl~~~~~~~s~~-~~~~~~~~-----~g~-----~v~~v~~~~--~~~---~d~~~l~~~i~-----~~~~~v~~~~ 144 (397)
.+|+....+|++.. .+...... .+. .+..+|+.. .+. -+++.+++.+. +++++|+++.
T Consensus 128 -~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~EP 206 (421)
T PRK09792 128 -PGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDIEAKQVAAIIFEP 206 (421)
T ss_pred -CeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhccCCCceEEEEEcc
Confidence 56766666565554 33332110 011 133344432 111 13477888775 4678999999
Q ss_pred ccCcccccc-c---HHHHHHHHHhcCcEEEEecccc-cCcc--ccccC--cccccEEEecccc-ccCCCCceEEEEecCC
Q psy8850 145 VNNEIGVIQ-P---ILEIGELCRSKGVIFHCDAAQA-VGKI--DINIQ--NYKVDLMSFSAHK-IYGPKGIGALYIRRNP 214 (397)
Q Consensus 145 ~~~~tG~~~-~---l~~i~~l~~~~gi~livD~a~~-~~~~--~~~~~--~~~~d~~~~s~~K-~~g~~g~g~~~~~~~~ 214 (397)
+++++|... | +++|.++|++||+++|+|++++ ++.. .+... ...+|++++| | +.++..+|+++++++.
T Consensus 207 vq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pDi~t~g--K~l~~G~pigav~~~~~i 284 (421)
T PRK09792 207 VQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYADKPDLMTMA--KSLAGGMPLSGVVGNANI 284 (421)
T ss_pred ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHhcCCCCcEEEee--hhhcCCCceEEEEEcHHH
Confidence 999999765 5 7899999999999999999987 2221 11111 2357876655 9 6554568999998766
Q ss_pred CCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceE
Q psy8850 215 RTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNL 294 (397)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 294 (397)
.+.+.+...+ .+.+. +...+++..++++.+.++ +..++++++.+++.+.|++....+..+.. ....+.++
T Consensus 285 ~~~~~~~~~~------~T~~g-npl~~aaa~a~l~~l~~~--~~~~~~~~~g~~l~~~l~~l~~~~p~v~~-vrG~Gl~~ 354 (421)
T PRK09792 285 MDAPAPGGLG------GTYAG-NPLAVAAAHAVLNIIDKE--SLCERANQLGQRLKNTLIDAKESVPAIAA-VRGLGSMI 354 (421)
T ss_pred HhccCCCCcC------CCCCC-CHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHHHHHhCCCcce-ecccceEE
Confidence 5555432211 22233 334455555788877653 45556666666666666541111111211 11225667
Q ss_pred EEEecCCC--------hHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHH
Q psy8850 295 NISFNFIE--------GESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIK 364 (397)
Q Consensus 295 ~~~~~~~~--------~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~ 364 (397)
.+.|++.+ ...+...+. |+.+.+. . ..++.||+.++..+++++|+++++
T Consensus 355 ~ie~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~---g------------------~~~~~irl~P~l~i~~~ei~~~~~ 413 (421)
T PRK09792 355 AAEFNDPQTGEPSAAIAQKIQQRALAQGLLLLTC---G------------------AYGNVIRFLYPLTIPDAQFDAAMK 413 (421)
T ss_pred EEEecCCccCCcchHHHHHHHHHHHHCCcEEeec---C------------------CCCCEEEEeCCCcCCHHHHHHHHH
Confidence 77775321 123443333 6666321 0 113889999999899999999999
Q ss_pred HHHHHHH
Q psy8850 365 LLKMKVK 371 (397)
Q Consensus 365 ~l~~~~~ 371 (397)
+|.+++.
T Consensus 414 ~l~~~l~ 420 (421)
T PRK09792 414 ILQDALS 420 (421)
T ss_pred HHHHHHh
Confidence 9998874
No 309
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.86 E-value=1.5e-18 Score=164.45 Aligned_cols=326 Identities=15% Similarity=0.113 Sum_probs=197.6
Q ss_pred CCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCC--CC-cEEE-eCChhHHHHHHHHHhHhh
Q psy8850 6 TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYAD--PR-EIIW-TSGATESNNLAIKGAAHF 81 (397)
Q Consensus 6 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~--~~-~i~~-~~g~t~a~~~~l~~l~~~ 81 (397)
.+..+|.|.+++++++.... ..+. .. ...+...++.+.|++.+..+ .+ .++| ++||++|++.+++... .
T Consensus 53 lGh~~p~v~~ai~~ql~~~~-~~~~----~~-~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr-~ 125 (425)
T PRK09264 53 YGHNNPVLKQALIDYLQRDG-ITHG----LD-MHTTAKREFLETFEETILKPRGLDYKVQFTGPTGTNAVEAALKLAR-K 125 (425)
T ss_pred CCCCCHHHHHHHHHHHHhcc-cccc----cc-cCcHHHHHHHHHHHHhhcCCcCCCceEEEeCCCHHHHHHHHHHHHH-H
Confidence 35678999999999987521 1111 11 11234566777777765322 22 4666 5899999999999644 4
Q ss_pred hccCCCEEEEcCCCChhhH-HHHHHHhh----C--C---cEEEEeccCCCC---CCCHHHHHHHhc------CCceEEEE
Q psy8850 82 YKKRGKHIITVQTEHKSVL-DSIRKLEN----D--G---FRVTYLKPKNNG---LITLSQLEEKIC------SDTILVSV 142 (397)
Q Consensus 82 ~~~~g~~vl~~~~~~~s~~-~~~~~~~~----~--g---~~v~~v~~~~~~---~~d~~~l~~~i~------~~~~~v~~ 142 (397)
+++ +.+|+....+|++.. .+...... . + ..+..+|.+... .-|++++++.+. +++.+|++
T Consensus 126 ~tg-r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~~aavi~ 204 (425)
T PRK09264 126 VTG-RTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSSGVDLPAAVIV 204 (425)
T ss_pred hcC-CCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccCCCCceEEEEE
Confidence 434 356666666565554 33332211 0 1 134455554211 126788888875 24689999
Q ss_pred ecccCccccccc----HHHHHHHHHhcCcEEEEecccc-cCc----cccccCcccccEEEeccccccCC--CCceEEEEe
Q psy8850 143 MLVNNEIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGK----IDINIQNYKVDLMSFSAHKIYGP--KGIGALYIR 211 (397)
Q Consensus 143 ~~~~~~tG~~~~----l~~i~~l~~~~gi~livD~a~~-~~~----~~~~~~~~~~d~~~~s~~K~~g~--~g~g~~~~~ 211 (397)
+.+....|.+.+ +++|.++|++||+++|+|++++ +|. ...+...+.+|++++| |.+|+ ..+|+++++
T Consensus 205 Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~~~~~~~v~PDi~t~~--K~l~~~G~pigav~~~ 282 (425)
T PRK09264 205 ETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFFSFERAGITPDIVTLS--KSISGYGLPMALVLIK 282 (425)
T ss_pred ecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHHHHhhcCCCCCEEEec--cccCCCccceEEEEEc
Confidence 999988887654 7999999999999999999986 221 1223233468888776 94443 336999998
Q ss_pred cCCCCccccccccCCccccccCCCCchhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhhh---cCcEEEeCCCC
Q psy8850 212 RNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAF-RLARIEMKEELKRILFLQKRLYNGLMES---IEEIYINGDMN 287 (397)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al-~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~~~~~ 287 (397)
++. ..+.....+ ...+ .+....++..+++ +.+.+ .++.++++++.++|++.|++. .+.+ +...
T Consensus 283 ~~i-~~~~~~~~~------~T~~-gnp~~~aaa~a~l~~~~~~--~~l~~~~~~~g~~l~~~l~~l~~~~~~~-~~~v-- 349 (425)
T PRK09264 283 PEL-DVWKPGEHN------GTFR-GNNLAFVTATAALEEYWSD--DAFEKEVKAKGELVRERLEEIAAKYPGL-GAEV-- 349 (425)
T ss_pred hhh-hccCCCccC------CCCC-CCHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHHHHHHhCCCc-eecc--
Confidence 764 232221111 1122 2334444454666 44333 356777777777777777651 2222 1111
Q ss_pred CCCCceEEEEecCCC-hHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHH
Q psy8850 288 NRIPHNLNISFNFIE-GESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIK 364 (397)
Q Consensus 288 ~~~~~~~~~~~~~~~-~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~ 364 (397)
...+.++.+.++... ...+...+. |+.+.+... ....||++++..+++++|+++++
T Consensus 350 rg~Gl~~~i~l~~~~~~~~l~~~~~~~Gv~~~~~~~---------------------~~~~lr~~p~l~~t~~ei~~~~~ 408 (425)
T PRK09264 350 RGRGMMQGIDFGDGELAGKIAAEAFENGLIIETSGP---------------------EDEVVKLLPPLTIDEEELEEGLD 408 (425)
T ss_pred eecccEEEEEecChHHHHHHHHHHHHCCCEEeccCC---------------------CCCEEEEeCCCCCCHHHHHHHHH
Confidence 112455567765321 334555544 776654210 12789999999999999999999
Q ss_pred HHHHHHHHHHh
Q psy8850 365 LLKMKVKKLRE 375 (397)
Q Consensus 365 ~l~~~~~~~~~ 375 (397)
+|.++++++.+
T Consensus 409 ~l~~~l~~~~~ 419 (425)
T PRK09264 409 ILEEAVAEVLA 419 (425)
T ss_pred HHHHHHHHHHh
Confidence 99999987743
No 310
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.86 E-value=8e-19 Score=165.43 Aligned_cols=323 Identities=14% Similarity=0.096 Sum_probs=197.7
Q ss_pred CCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCC--C-CcEEE-eCChhHHHHHHHHHhHhh
Q psy8850 6 TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYAD--P-REIIW-TSGATESNNLAIKGAAHF 81 (397)
Q Consensus 6 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~--~-~~i~~-~~g~t~a~~~~l~~l~~~ 81 (397)
.+..+|.|.+++.+++.... .. +.. ....+...++.+.|++....+ . +.++| ++||++|++.+++... .
T Consensus 49 lGh~~p~v~~ai~~ql~~~~-~~----~~~-~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr-~ 121 (412)
T TIGR02407 49 YGHNNPKLKQALIDYLADDG-II----HSL-DMATEAKREFLETFNEIILKPRGLDYKVQFPGPTGTNAVESALKLAR-K 121 (412)
T ss_pred CCCCCHHHHHHHHHHHhhcc-ce----ecc-ccCcHHHHHHHHHHHHhccCccCCCceEEEeCCCchHHHHHHHHHHh-h
Confidence 35678999999999987521 11 111 111344566777777764322 1 24666 5899999999999654 4
Q ss_pred hccCCCEEEEcCCCChhhHHHHHHHhh-----C--C---cEEEEeccCCCCC---CCHHHHHHHhc------CCceEEEE
Q psy8850 82 YKKRGKHIITVQTEHKSVLDSIRKLEN-----D--G---FRVTYLKPKNNGL---ITLSQLEEKIC------SDTILVSV 142 (397)
Q Consensus 82 ~~~~g~~vl~~~~~~~s~~~~~~~~~~-----~--g---~~v~~v~~~~~~~---~d~~~l~~~i~------~~~~~v~~ 142 (397)
+++ +.+|+....+|++.......... . + ..+..+|.+.... -+++.+++.+. +++.+|++
T Consensus 122 ~tg-r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~aavi~ 200 (412)
T TIGR02407 122 VTG-RSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDLPAAVIL 200 (412)
T ss_pred hcC-CCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhccCCCCceEEEEe
Confidence 433 45677666666555443332211 0 1 1334445432111 24677888875 35689999
Q ss_pred ecccCccccccc----HHHHHHHHHhcCcEEEEecccc-cCc----cccccCcccccEEEecccc-ccC-CCCceEEEEe
Q psy8850 143 MLVNNEIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGK----IDINIQNYKVDLMSFSAHK-IYG-PKGIGALYIR 211 (397)
Q Consensus 143 ~~~~~~tG~~~~----l~~i~~l~~~~gi~livD~a~~-~~~----~~~~~~~~~~d~~~~s~~K-~~g-~~g~g~~~~~ 211 (397)
+.+++++|.+.+ +++|.++|++||+++|+|++++ +|. ...+...+.+|++++| | +.+ ...+|+++++
T Consensus 201 Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~~v~PDi~~~~--K~lg~~G~pigav~~~ 278 (412)
T TIGR02407 201 ETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSFEPAGIEPDIVCLS--KSISGYGLPLALTLIK 278 (412)
T ss_pred ccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHHhcccCCCCCEEEec--hhccCCccceeEEEEc
Confidence 999999998654 7899999999999999999986 332 1223344578988776 9 443 3348999998
Q ss_pred cCCCCccccccccCCccccccCCCCchhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhh---cCcEEEeCCCC
Q psy8850 212 RNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRL-ARIEMKEELKRILFLQKRLYNGLMES---IEEIYINGDMN 287 (397)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~-~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~~~~~ 287 (397)
++. ..+.....+ ... ..+...+++..++++. +.+ .++.++..++.+++++.|+.. ++++... .+
T Consensus 279 ~~~-~~~~~~~~~------~T~-~gnpl~~aaa~a~l~~~i~~--~~l~~~~~~~g~~l~~~l~~l~~~~~~~~~~-vr- 346 (412)
T TIGR02407 279 PEL-DVWKPGEHN------GTF-RGNNLAFVTATAALEYYWSD--DAFEKAVQRKSEIIQERLDRIVAEYPELIKQ-VR- 346 (412)
T ss_pred hhh-hccCCCccC------CCC-CccHHHHHHHHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHHHhhCCCceEe-ee-
Confidence 764 333221111 112 2344445555577874 443 345666666667776666541 3322211 11
Q ss_pred CCCCceEEEEecCCC-hHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHH
Q psy8850 288 NRIPHNLNISFNFIE-GESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIK 364 (397)
Q Consensus 288 ~~~~~~~~~~~~~~~-~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~ 364 (397)
..+.++.+.++... ...+...+. |+.+.+.. ..++.||++++..++++|++++++
T Consensus 347 -g~Gl~~~l~l~~~~~~~~~~~~~~~~Gv~v~~~~---------------------~~~~~lr~~p~l~~t~~~i~~~~~ 404 (412)
T TIGR02407 347 -GRGLMQGIECGDGDLAGKIAKAAFENGLIIETSG---------------------PNDEVIKLLPPLTIDEETLQQGLD 404 (412)
T ss_pred -cceeEEEEEecChHHHHHHHHHHHHCCCEEeccC---------------------CCCCEEEEECCCCCCHHHHHHHHH
Confidence 12456677776422 345555554 77775421 012789999999999999999999
Q ss_pred HHHHHHHH
Q psy8850 365 LLKMKVKK 372 (397)
Q Consensus 365 ~l~~~~~~ 372 (397)
+|.+++++
T Consensus 405 ~l~~~l~~ 412 (412)
T TIGR02407 405 ILEQAVEE 412 (412)
T ss_pred HHHHHHhC
Confidence 99998753
No 311
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.86 E-value=9.1e-19 Score=166.29 Aligned_cols=326 Identities=16% Similarity=0.193 Sum_probs=199.8
Q ss_pred CCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCC-CCcEEEeCChhHHHHHHHHHhHhhhcc
Q psy8850 6 TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYAD-PREIIWTSGATESNNLAIKGAAHFYKK 84 (397)
Q Consensus 6 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~-~~~i~~~~g~t~a~~~~l~~l~~~~~~ 84 (397)
.+..+|.|.+++.+++.... .... .+...+...++.+.|++++... .+.++|++||++|++.+++.. +.+++
T Consensus 56 lGH~~p~v~~Ai~~ql~~~~-~~~~-----~~~~~~~~~~lae~L~~~~p~~~~~~v~f~~SGseA~e~AiklA-r~~tg 128 (445)
T PRK08593 56 VGHAPPRVVEAIKAQADKFI-HYTP-----AYMYHEPLVRLAKKLCELAPGDFEKRVTFGLSGSDANDGIIKFA-RAYTG 128 (445)
T ss_pred CCCCCHHHHHHHHHHHHhcc-Cccc-----cccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHH-HHhhC
Confidence 34678999999999987622 1111 0112345677888888887543 247999999999999999954 34444
Q ss_pred CCCEEEEcCCCChhh-HHHHHHHhhC----------CcEEEEeccCCCC-----CCC-------HHHHHHHhc-----CC
Q psy8850 85 RGKHIITVQTEHKSV-LDSIRKLEND----------GFRVTYLKPKNNG-----LIT-------LSQLEEKIC-----SD 136 (397)
Q Consensus 85 ~g~~vl~~~~~~~s~-~~~~~~~~~~----------g~~v~~v~~~~~~-----~~d-------~~~l~~~i~-----~~ 136 (397)
+ .+|+.....|++. ..++...... ...+..+|.++.. ..+ ++++++.+. ++
T Consensus 129 r-~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (445)
T PRK08593 129 R-PYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYLPADE 207 (445)
T ss_pred C-CeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhhcCCCc
Confidence 4 4566555555554 4443322100 0123344443211 011 244554442 56
Q ss_pred ceEEEEecccCccccccc----HHHHHHHHHhcCcEEEEecccc-cCccc----cccCcccccEEEecccc-ccCCCCce
Q psy8850 137 TILVSVMLVNNEIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKID----INIQNYKVDLMSFSAHK-IYGPKGIG 206 (397)
Q Consensus 137 ~~~v~~~~~~~~tG~~~~----l~~i~~l~~~~gi~livD~a~~-~~~~~----~~~~~~~~d~~~~s~~K-~~g~~g~g 206 (397)
+.+|+++.+++..|.+.| ++++.++|++||+++|+|+++. +|... .+.....+|+++++ | +.|+..+|
T Consensus 208 iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~a~~~~gv~pDi~t~g--K~l~~G~p~g 285 (445)
T PRK08593 208 VACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWSSISHFNITPDLMSFG--KSLAGGMPMS 285 (445)
T ss_pred eEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHHHHHhcCCCCCEeeec--ccccCCcccE
Confidence 889999999999998876 8999999999999999999984 43221 12223357888766 9 55444478
Q ss_pred EEEEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CcEEEeCC
Q psy8850 207 ALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESI-EEIYINGD 285 (397)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~ 285 (397)
+++++++..+.+.... ..+..+ .+...+++..++++.+.+ .++.++..++.++|++.|++ + ....++..
T Consensus 286 av~~~~~i~~~~~~~~------~~~T~~-~~pl~~aaa~a~l~~l~~--~~l~~~~~~~g~~l~~~L~~-l~~~~~~v~~ 355 (445)
T PRK08593 286 AIVGRKEIMESLEAPA------HLFTTG-ANPVSCAAALATIDMIED--ESLLQRSAEKGEYARKRFDQ-WVSKYNFVGD 355 (445)
T ss_pred EEEEcHHHHhhhccCC------CCCCCC-CCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHH-HHhcCCcEEE
Confidence 9999876655443211 112333 344555656688888765 35677777777788777765 3 11111211
Q ss_pred CCCCCCceEEEEecCC------C---hHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCC
Q psy8850 286 MNNRIPHNLNISFNFI------E---GESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFT 354 (397)
Q Consensus 286 ~~~~~~~~~~~~~~~~------~---~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~ 354 (397)
- ...+.++.+.+... + ...+...+. |+.+.+. ..+.+|+.++..+
T Consensus 356 v-rG~Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~-----------------------~~~~lr~~p~l~~ 411 (445)
T PRK08593 356 V-RGYGLSIGIDIVSDKKLKTRDNEAALKICNYCFEHGVVIIAV-----------------------AGNVLRFQPPLVI 411 (445)
T ss_pred E-eccceEEEEEEecCCCcCCCcHHHHHHHHHHHHHCCeEEecc-----------------------CCCEEEEECCCcc
Confidence 0 11133334444211 1 123444443 6655321 1278999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHh
Q psy8850 355 TEKEIDFTIKLLKMKVKKLRE 375 (397)
Q Consensus 355 ~~~~i~~~~~~l~~~~~~~~~ 375 (397)
|++|||++++++.++++++.+
T Consensus 412 t~~~id~~~~~l~~~l~~~~~ 432 (445)
T PRK08593 412 TYEQLDTALNTIEQAFTALEA 432 (445)
T ss_pred CHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999988755
No 312
>KOG1383|consensus
Probab=99.86 E-value=5.6e-19 Score=158.25 Aligned_cols=312 Identities=19% Similarity=0.181 Sum_probs=218.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCc-EEEeCChhHHHHHHHHHhHhhhcc-C---CCEEEEcCCCChhhHHHHHHHhhCCcEEE
Q psy8850 40 EKAIEKARNEVAQLIYADPRE-IIWTSGATESNNLAIKGAAHFYKK-R---GKHIITVQTEHKSVLDSIRKLENDGFRVT 114 (397)
Q Consensus 40 ~~~~~~~~~~la~~~~~~~~~-i~~~~g~t~a~~~~l~~l~~~~~~-~---g~~vl~~~~~~~s~~~~~~~~~~~g~~v~ 114 (397)
.....++-..++.+++.+++. -..|.|+|+++.+..+........ + ...++++...|.++..+.+.+ ++++.
T Consensus 119 ~~~e~~~Vnm~~~L~~~~~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf---~v~l~ 195 (491)
T KOG1383|consen 119 RKLEAECVNMIANLFNAPSDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYF---EVELR 195 (491)
T ss_pred HHHHHHHHHHHHHHhcCCccccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHhhE---EEEEE
Confidence 456677888999999997553 556779999855555544332212 1 256777766666665555555 99999
Q ss_pred EeccC-CCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHh-cCcEEEEecccccCcc--------cccc
Q psy8850 115 YLKPK-NNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRS-KGVIFHCDAAQAVGKI--------DINI 184 (397)
Q Consensus 115 ~v~~~-~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~-~gi~livD~a~~~~~~--------~~~~ 184 (397)
.||++ .++.+|+..+...+.++|.+++.+.+++|+|.+.|+++|.++.-+ +++++++|++.+.... ++|+
T Consensus 196 ~V~~~~~~~~~D~~k~~~~i~eNti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~~~fdF 275 (491)
T KOG1383|consen 196 EVPLDEGDYRVDPGKVVRMIDENTIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLNEEEFDF 275 (491)
T ss_pred eeeccccceEecHHHHHHHhccceEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCccccccccccCcccccc
Confidence 99999 688999999999999999999999999999999999999999999 9999999999884443 4677
Q ss_pred CcccccEEEecccc-ccCCCCceEEEEecCCCCcc----ccccccCCccccccCCCCchhHHHHHHH-HHHHHHHHHHHH
Q psy8850 185 QNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRI----EAQIHGGGHEYGLRSGTLATHQIVGMGE-AFRLARIEMKEE 258 (397)
Q Consensus 185 ~~~~~d~~~~s~~K-~~g~~g~g~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~-al~~~~~~~~~~ 258 (397)
...++..++.+.|| .+.|.|+|+++-+.+.+..- .....|+.....-..|+.+..++++.++ .+.+..+|+.+.
T Consensus 276 r~p~V~Sisa~~HKYGl~~~G~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG~eGY~~~ 355 (491)
T KOG1383|consen 276 RVPGVTSISADGHKYGLAPAGSSWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAALMSLGEEGYREN 355 (491)
T ss_pred CCCCceeEeeccceeeeeecCcEEEEEcccccccceEEEeccccCccccCcccccCCcccHHHHHHHHHHHhhHHHHHHH
Confidence 77788999999999 78899999998876543322 2223333332222223333344444444 456667899999
Q ss_pred HHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCChHHHHHHhCCcEecccCccCCCCCChhhHHHhhCCC
Q psy8850 259 LKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAIKDIAVSSGSACTSASLEPSYVLRALGCN 338 (397)
Q Consensus 259 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~g~~ 338 (397)
.+++.+.+..|++.+++ +.++.+.+.+. -.+..+.-...+-.++.+.|+. -| |.+.++.+.
T Consensus 356 ~~~ive~~~~l~egie~-i~~i~i~gkp~---vs~~~~~s~~~~i~elsd~l~~----~G-----------W~lnalq~P 416 (491)
T KOG1383|consen 356 TQNIVETARKLREGIEN-IKGIKIVGKPL---VSFILFGSNDVNIFELSDLLRK----KG-----------WILNALQFP 416 (491)
T ss_pred HHHHHHHHHHHHHhhhc-cccceecCCCc---EEEEEccCCccchhhhhHHHHh----cC-----------cCccccCCC
Confidence 99999999999999999 99999998743 1122222222333444444431 11 233333322
Q ss_pred ccccCceEEEeeCCCCCHHH-HHHHHHHHHHHHHHHHhcCc
Q psy8850 339 DELAHSSIRFTIGRFTTEKE-IDFTIKLLKMKVKKLRELSP 378 (397)
Q Consensus 339 ~~~~~~~iRi~~~~~~~~~~-i~~~~~~l~~~~~~~~~~~~ 378 (397)
..+.+++......++ .|+++..|.++++++.+.-+
T Consensus 417 -----~a~Hi~vt~~~~~~~~A~~~v~Di~~~~~el~~~p~ 452 (491)
T KOG1383|consen 417 -----AAIHICVTRVHAREDVADRFVADIRKVVEELKSLPE 452 (491)
T ss_pred -----CceEEEEEeeeccHHHHHHHHHHHHHHHHHHHhCCC
Confidence 467777775544444 68999999999999876543
No 313
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.86 E-value=1.8e-18 Score=163.87 Aligned_cols=321 Identities=13% Similarity=0.103 Sum_probs=194.2
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCC-CCCcEEEeCChhHHHHHHHHHhHhhhccC
Q psy8850 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYA-DPREIIWTSGATESNNLAIKGAAHFYKKR 85 (397)
Q Consensus 7 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~i~~~~g~t~a~~~~l~~l~~~~~~~ 85 (397)
+..+|.|.+++++++.... .... .....+...++.+.|++++.. ..+.++|++||++|++.+++.. +.++++
T Consensus 48 Gh~~p~v~~a~~~ql~~~~-~~~~-----~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~AlklA-r~~tgr 120 (420)
T TIGR00700 48 GHSHPRVVDAVRTQVAEFT-HTCF-----MVTPYEGYVALAEKLNRIAPGSGPKKSVFFNSGAEAVENAVKIA-RSYTGR 120 (420)
T ss_pred CCCCHHHHHHHHHHHHhcc-Cccc-----cccCChHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHH-HHhcCC
Confidence 4678999999999997622 1111 111123455677778887742 2357999999999999999954 444444
Q ss_pred CCEEEEcCCCChhhH-HHHHHHhh-----CCc-----EEEEeccCCCCC-------C----CHHHHHHHhc-----CCce
Q psy8850 86 GKHIITVQTEHKSVL-DSIRKLEN-----DGF-----RVTYLKPKNNGL-------I----TLSQLEEKIC-----SDTI 138 (397)
Q Consensus 86 g~~vl~~~~~~~s~~-~~~~~~~~-----~g~-----~v~~v~~~~~~~-------~----d~~~l~~~i~-----~~~~ 138 (397)
.+|+....+|++.. .+...... .+. .+..+|...... . +++.+++.+. +++.
T Consensus 121 -~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iA 199 (420)
T TIGR00700 121 -PGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVIDVGANNVA 199 (420)
T ss_pred -CcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHHHHHhhcCCCcEE
Confidence 45665555555544 44332111 011 123333321100 0 2456776652 4678
Q ss_pred EEEEecccCccccccc----HHHHHHHHHhcCcEEEEecccccC-cc----ccccCcccccEEEecccc-ccCCCCceEE
Q psy8850 139 LVSVMLVNNEIGVIQP----ILEIGELCRSKGVIFHCDAAQAVG-KI----DINIQNYKVDLMSFSAHK-IYGPKGIGAL 208 (397)
Q Consensus 139 ~v~~~~~~~~tG~~~~----l~~i~~l~~~~gi~livD~a~~~~-~~----~~~~~~~~~d~~~~s~~K-~~g~~g~g~~ 208 (397)
+|+++.++..+|.+.| +++|.++|++||+++|+|++++.. .. ..+.....+|++++ +| +.++..+|++
T Consensus 200 avi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~~~a~~~~~~~pDi~~l--sK~l~~G~pig~v 277 (420)
T TIGR00700 200 ALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGAMFACEHEGPEPDLITT--AKSLADGLPLSGV 277 (420)
T ss_pred EEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccchhHHHhhcCCCCCEEEe--eccccCCcceEEE
Confidence 9999999999998877 789999999999999999998722 21 11222235787765 59 5544458999
Q ss_pred EEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---cCcEEEeCC
Q psy8850 209 YIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMES---IEEIYINGD 285 (397)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~~~ 285 (397)
+++++....+.....+ ...+. +...+++..++++.+.+ ..+.++..++.+++++.|++. ++.+..+..
T Consensus 278 ~~~~~i~~~~~~~~~~------~T~~~-~pl~~aaa~a~l~~l~~--~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg 348 (420)
T TIGR00700 278 TGRAEIMDAPAPGGLG------GTYAG-NPLACAAALAVLAIIES--EGLIERARQIGRLVTDRLTTLKAVDPRIGDVRG 348 (420)
T ss_pred EecHHHHhhcCCCCcC------CCCCc-CHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHhhCCCEEEeec
Confidence 9987765555432211 22233 34445555577887654 234445555555555555441 333322222
Q ss_pred CCCCCCceEEEEecCC----C----hHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCC
Q psy8850 286 MNNRIPHNLNISFNFI----E----GESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTT 355 (397)
Q Consensus 286 ~~~~~~~~~~~~~~~~----~----~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~ 355 (397)
. +.++.+.+.+. + ...+...+. ||.+.++..+ +++|||+++..++
T Consensus 349 ~----G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~p~~~f---------------------~~~lRl~p~l~~~ 403 (420)
T TIGR00700 349 L----GAMIAVELVDPGTTEPDAGLAERIATAAHAAGLLLLTCGMF---------------------GNIIRFLPPLTIG 403 (420)
T ss_pred c----ceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeccCCC---------------------CCEEEEECCCCcC
Confidence 1 45556655321 1 123443333 7888765321 2789999988789
Q ss_pred HHHHHHHHHHHHHHHH
Q psy8850 356 EKEIDFTIKLLKMKVK 371 (397)
Q Consensus 356 ~~~i~~~~~~l~~~~~ 371 (397)
++++++++++|.+++.
T Consensus 404 ~~~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 404 DELLSEGLDILCAILA 419 (420)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999998863
No 314
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.86 E-value=6.8e-19 Score=167.00 Aligned_cols=330 Identities=14% Similarity=0.104 Sum_probs=202.4
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhc---
Q psy8850 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYK--- 83 (397)
Q Consensus 7 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~--- 83 (397)
+..+|.+.+++++++......+ ... ...+...++.+.|++++....+.++|++||++|++.+++.......
T Consensus 64 Gh~~p~v~~ai~~ql~~l~~~~---~~~---~~~~~~~~la~~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g 137 (445)
T PRK09221 64 GHGRPEIVEAVARQAATLDYAP---AFQ---MGHPLAFELAERLAELAPGGLDHVFFTNSGSESVDTALKIALAYHRARG 137 (445)
T ss_pred CCCCHHHHHHHHHHHHhccCcc---ccc---cCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcC
Confidence 4678999999999987632111 111 1123456678888888754345799999999999999996554321
Q ss_pred -cCCCEEEEcCCCChhhHHHHHHHhh-----CC-----cEEEEeccCC---C--CC--------CCHHHHHHHhc----C
Q psy8850 84 -KRGKHIITVQTEHKSVLDSIRKLEN-----DG-----FRVTYLKPKN---N--GL--------ITLSQLEEKIC----S 135 (397)
Q Consensus 84 -~~g~~vl~~~~~~~s~~~~~~~~~~-----~g-----~~v~~v~~~~---~--~~--------~d~~~l~~~i~----~ 135 (397)
..+.+|+....+|++.....-.+.. .+ ..+..+|... . .. -..+++++.+. +
T Consensus 138 ~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~ 217 (445)
T PRK09221 138 QGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELADDLERLVALHDAS 217 (445)
T ss_pred CCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHHHHHHHHHHHHHHHHhcCCC
Confidence 1235677777766655432221110 00 1123333321 0 00 01356777764 4
Q ss_pred CceEEEEecccCccccccc----HHHHHHHHHhcCcEEEEecccc-cCcc----ccccCcccccEEEecccc-ccCC-CC
Q psy8850 136 DTILVSVMLVNNEIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKI----DINIQNYKVDLMSFSAHK-IYGP-KG 204 (397)
Q Consensus 136 ~~~~v~~~~~~~~tG~~~~----l~~i~~l~~~~gi~livD~a~~-~~~~----~~~~~~~~~d~~~~s~~K-~~g~-~g 204 (397)
++.+|+++.+++..|.+.| ++++.++|++||+++|+|++++ +|.. ..+.....+|++++| | +.|+ ..
T Consensus 218 ~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~~~~~~gv~PDi~~~g--K~l~gG~~P 295 (445)
T PRK09221 218 TIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAFAAERFGVTPDIITFA--KGLTNGAIP 295 (445)
T ss_pred cEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCchhhHHHhcCCCCCEEEec--cccccCccc
Confidence 6789999999999999888 8999999999999999999985 4421 122223457988877 9 5432 34
Q ss_pred ceEEEEecCCCCcccccccc-CCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEe
Q psy8850 205 IGALYIRRNPRTRIEAQIHG-GGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYIN 283 (397)
Q Consensus 205 ~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 283 (397)
+|.++++++..+.+...... ......++.+. +...+++..++++.+.+ ..+.++..++.++|++.|++ +.....+
T Consensus 296 i~av~~~~~i~~~~~~~~~~~~~~~~~~T~~~-~pl~~aaa~a~L~~i~~--~~l~~~~~~~g~~l~~~l~~-l~~~~~v 371 (445)
T PRK09221 296 MGAVIASDEIYDAFMQGPEYAIEFFHGYTYSA-HPVACAAGLATLDIYRE--EDLFERAAELAPYFEDAVHS-LKGLPHV 371 (445)
T ss_pred ceeeEEcHHHHHhhccCcccccccccccCCCc-CHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHh-hccCCCE
Confidence 78888886654443211000 00112233333 33445555578888765 35678889999999998887 5322211
Q ss_pred CCCCCCCCceEEEEecCC------ChHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCC
Q psy8850 284 GDMNNRIPHNLNISFNFI------EGESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTT 355 (397)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~------~~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~ 355 (397)
.+ -...+.+..+.+... ....+.+.+. |+.+..+ ++.+||+++..++
T Consensus 372 ~~-vrg~Gl~~~v~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~------------------------~~~lr~~Ppl~~t 426 (445)
T PRK09221 372 ID-IRNIGLVAGIELAPRPGAPGARGYEAFMKCFEKGLLVRYT------------------------GDTIALSPPLIIE 426 (445)
T ss_pred EE-EecCceEEEEEEecccccccchHHHHHHHHHHCCeEEeec------------------------CCEEEEECCccCC
Confidence 11 011133334444321 1234555443 6666432 2689999999999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q psy8850 356 EKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 356 ~~~i~~~~~~l~~~~~~~ 373 (397)
++|||+++++|++++.++
T Consensus 427 ~~eid~~~~~l~~~l~~~ 444 (445)
T PRK09221 427 KAQIDELVDALGDALRAV 444 (445)
T ss_pred HHHHHHHHHHHHHHHHhh
Confidence 999999999999998764
No 315
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.85 E-value=8e-19 Score=166.72 Aligned_cols=331 Identities=11% Similarity=0.081 Sum_probs=204.3
Q ss_pred CCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhc--
Q psy8850 6 TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYK-- 83 (397)
Q Consensus 6 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~-- 83 (397)
.+..+|.|.+++++++..... ... . + ...+...++.+.|+++.+...+.++|++||++|++.+++.....+.
T Consensus 68 lGh~~p~v~~Ai~~ql~~~~~-~~~--~--~-~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGseAve~AlKlA~~~~~~r 141 (453)
T PRK06943 68 FGHANPRINAALKDQLDTLEH-AML--A--G-CTHEPAIELAERLAALTGGTLGHAFFASDGASAVEIALKMSFHAWRNR 141 (453)
T ss_pred CCCCCHHHHHHHHHHHHhcCC-ccc--c--c-cCCHHHHHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHHHHHHHh
Confidence 356789999999999976321 110 0 0 1123456788888888764445799999999999999997643221
Q ss_pred --cCCCEEEEcCCCChhhHHHHHHHhh-C----C-----cEEEEeccCCC-CC-----------CCHHHHHHHhc---CC
Q psy8850 84 --KRGKHIITVQTEHKSVLDSIRKLEN-D----G-----FRVTYLKPKNN-GL-----------ITLSQLEEKIC---SD 136 (397)
Q Consensus 84 --~~g~~vl~~~~~~~s~~~~~~~~~~-~----g-----~~v~~v~~~~~-~~-----------~d~~~l~~~i~---~~ 136 (397)
..+.+|+....+|++.....-.+.. . + ..+..+|.... +. -+++++++.+. ++
T Consensus 142 g~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 221 (453)
T PRK06943 142 GRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAARALADVRRLFAERAGK 221 (453)
T ss_pred CCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCc
Confidence 1246677777766665433222110 0 0 11233433221 10 12467777774 46
Q ss_pred ceEEEEec-ccCccccccc----HHHHHHHHHhcCcEEEEecccc-cCccc----cccCcccccEEEecccc-ccCC-CC
Q psy8850 137 TILVSVML-VNNEIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKID----INIQNYKVDLMSFSAHK-IYGP-KG 204 (397)
Q Consensus 137 ~~~v~~~~-~~~~tG~~~~----l~~i~~l~~~~gi~livD~a~~-~~~~~----~~~~~~~~d~~~~s~~K-~~g~-~g 204 (397)
+.+|+++. ++...|.+.| ++.+.++|++||+++|+|+++. +|..- .+.....+|+++++ | +.|+ ..
T Consensus 222 iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~fa~~~~gv~PDivt~g--Kgl~gG~~P 299 (453)
T PRK06943 222 IAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTFFACEQAGVWPDFLCLS--KGISGGYLP 299 (453)
T ss_pred eEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcchhHHHhCCCCCCeEeee--hhhccCccc
Confidence 88999998 4888888765 7899999999999999999986 43321 12233469999998 9 6554 35
Q ss_pred ceEEEEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeC
Q psy8850 205 IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYING 284 (397)
Q Consensus 205 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 284 (397)
+|.++++++..+.+......+......+.+ .|...+++..++|+.+.+ +++.++..++.++|.+.|++ +.....+.
T Consensus 300 i~av~~~~ei~~~~~~~~~~~~~~~~~T~~-gnpl~~aaa~a~L~~i~~--~~l~~~~~~~G~~l~~~L~~-l~~~~~v~ 375 (453)
T PRK06943 300 LSLVLSRDAIFAAFYDDDVTRGFLHSHSYT-GNPLACRAALATLDLFAE--DDVLARNARKSARLRAALAP-LAAHPQVR 375 (453)
T ss_pred ceEEEEcHHHHHhhcccCccCCccCCCCCC-CCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHH-HhcCCCEE
Confidence 899999877655443210000001112222 244556666688888765 45667777788888888876 42211111
Q ss_pred CCCCCCCceEEEEecC-CC-----hHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCH
Q psy8850 285 DMNNRIPHNLNISFNF-IE-----GESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTE 356 (397)
Q Consensus 285 ~~~~~~~~~~~~~~~~-~~-----~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~ 356 (397)
. -...+.++.+.+.. .+ ...+...+. |+.+.+. ++.+||+++..+|+
T Consensus 376 ~-vrG~Gl~~gvel~~~~~~~~~~~~~i~~~~~~~Gll~~~~------------------------g~~l~~~Ppl~it~ 430 (453)
T PRK06943 376 H-LRQRGTIFAFDVALDGDAARTFSRRFFEAALERELLLRPI------------------------GTTVYLMPPYVLDD 430 (453)
T ss_pred e-EeccccEEEEEEccCCCcchHHHHHHHHHHHHCCcEEEec------------------------CCEEEEeCCCcCCH
Confidence 1 11224555666641 11 122333333 6665431 25699999999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy8850 357 KEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 357 ~~i~~~~~~l~~~~~~~ 373 (397)
+|||+++++|.++++++
T Consensus 431 ~eid~~~~~l~~al~~~ 447 (453)
T PRK06943 431 DEIAWLAERTRATLDAT 447 (453)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999999875
No 316
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.85 E-value=2.6e-18 Score=162.40 Aligned_cols=319 Identities=16% Similarity=0.126 Sum_probs=197.3
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCC-CCCcEEEeCChhHHHHHHHHHhHhhhccC
Q psy8850 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYA-DPREIIWTSGATESNNLAIKGAAHFYKKR 85 (397)
Q Consensus 7 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~i~~~~g~t~a~~~~l~~l~~~~~~~ 85 (397)
+..+|.+.+++.+++.... .... .....+...++.+.++++... ..+.++|++||++|++.+++... .++++
T Consensus 55 Gh~~p~v~~ai~~ql~~~~-~~~~-----~~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~AlklAr-~~tgr 127 (421)
T PRK06777 55 GHRHPKVVAAVRQQLDQFT-HTAY-----QIVPYASYVTLAERINALAPIDGPAKTAFFTTGAEAVENAVKIAR-AYTGR 127 (421)
T ss_pred CCCCHHHHHHHHHHHhhcc-cccc-----cccCChHHHHHHHHHHHhCCCCCCceEEEeCCcHHHHHHHHHHHH-HhhCC
Confidence 4678999999999998632 1111 111123345677778887653 23579999999999999999654 44343
Q ss_pred CCEEEEcCCCChhhHHHHHHHhhC--Cc---------EEEEeccCCC--C---CCCHHHHHHHhc-----CCceEEEEec
Q psy8850 86 GKHIITVQTEHKSVLDSIRKLEND--GF---------RVTYLKPKNN--G---LITLSQLEEKIC-----SDTILVSVML 144 (397)
Q Consensus 86 g~~vl~~~~~~~s~~~~~~~~~~~--g~---------~v~~v~~~~~--~---~~d~~~l~~~i~-----~~~~~v~~~~ 144 (397)
.+|+....+|++.......+... .. .+..++.++. + .-+++.+++.+. +++.+|+++.
T Consensus 128 -~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~Ep 206 (421)
T PRK06777 128 -PGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADIAPDQVAAILLEP 206 (421)
T ss_pred -CeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhccCCCceEEEEECC
Confidence 56766666665554333322110 01 1222232211 1 113566777764 3578999999
Q ss_pred ccCccccc-cc---HHHHHHHHHhcCcEEEEeccccc-Ccc----ccccCcccccEEEecccc-ccCCCCceEEEEecCC
Q psy8850 145 VNNEIGVI-QP---ILEIGELCRSKGVIFHCDAAQAV-GKI----DINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNP 214 (397)
Q Consensus 145 ~~~~tG~~-~~---l~~i~~l~~~~gi~livD~a~~~-~~~----~~~~~~~~~d~~~~s~~K-~~g~~g~g~~~~~~~~ 214 (397)
+++..|.. .| +++|.++|++||+++|+|++++. +.. ........+|++++ +| +.++..+|+++++++.
T Consensus 207 v~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~pDiv~~--sK~l~~G~pigav~~~~~i 284 (421)
T PRK06777 207 IQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKLFAMEYYDVKPDLITM--AKSLGGGMPISAVVGRAEV 284 (421)
T ss_pred ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCchhhhhhcCCCCCEEee--ehhhcCCCceEEEEEcHHH
Confidence 99988864 44 78999999999999999999872 211 11112235787755 59 5443448999998766
Q ss_pred CCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc----CcEEEeCCCCCCC
Q psy8850 215 RTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESI----EEIYINGDMNNRI 290 (397)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~~~~~~~~~~~~~ 290 (397)
.+.+.+... ....+ .+...+++..++++.+.+ +++.++.+++.+++++.|++ + +.+..+...
T Consensus 285 ~~~~~~~~~------~~T~~-~~p~~~aaa~a~L~~~~~--~~l~~~~~~~g~~l~~~L~~-l~~~~~~i~~vrg~---- 350 (421)
T PRK06777 285 MDAPAPGGL------GGTYA-GNPLAVAAALAVLDVIAE--EKLCQRALILGAHLVEVLEK-AKASCPAIVDIRAR---- 350 (421)
T ss_pred HhccCCCCC------CCCCC-cCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHH-HHHhCCCeEEecCc----
Confidence 555543221 12233 344555666678887665 56778888888888888876 3 322222221
Q ss_pred CceEEEEecCC----ChHHHHHHh----C--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHH
Q psy8850 291 PHNLNISFNFI----EGESLLMAI----K--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEID 360 (397)
Q Consensus 291 ~~~~~~~~~~~----~~~~~~~~l----~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~ 360 (397)
+.++.+.+... +..++...+ . |+.+.++..+ ++++||+++...++++++
T Consensus 351 G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~~---------------------g~~lr~~ppl~i~~~~i~ 409 (421)
T PRK06777 351 GSMVAVEFNDPQTGKPSPEFTRQYQRQALEEGLLLLSCGVH---------------------GNVIRFLYPLTIPDAQFS 409 (421)
T ss_pred eEEEEEEEecCccCCccHHHHHHHHHHHHhCCeEEeecCCC---------------------CCEEEEeCCCCCCHHHHH
Confidence 33444445321 122233222 2 7877665211 268999999889999999
Q ss_pred HHHHHHHHHH
Q psy8850 361 FTIKLLKMKV 370 (397)
Q Consensus 361 ~~~~~l~~~~ 370 (397)
+++++|.+++
T Consensus 410 ~~~~~l~~~l 419 (421)
T PRK06777 410 KALNILTRLL 419 (421)
T ss_pred HHHHHHHHHH
Confidence 9999999876
No 317
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.85 E-value=4.7e-19 Score=172.30 Aligned_cols=226 Identities=16% Similarity=0.089 Sum_probs=171.5
Q ss_pred HHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHH-HHHHhhCCcEEEEeccCC
Q psy8850 42 AIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDS-IRKLENDGFRVTYLKPKN 120 (397)
Q Consensus 42 ~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~-~~~~~~~g~~v~~v~~~~ 120 (397)
.+.+.++.+|+.||++ ...++++|+|.+|.+++.+++ ++||+|++..++|.|...+ +.+. |+++++++...
T Consensus 175 ~i~eAq~~AA~~fgAd-~tyFlvNGTS~gn~a~i~a~~----~~Gd~VLvdRN~HKSv~hgaLiLs---Ga~PVYl~P~~ 246 (720)
T PRK13578 175 AAKDAQKHAAKVFNAD-KTYFVLNGTSASNKVVTNALL----TPGDLVLFDRNNHKSNHHGALIQA---GATPVYLETAR 246 (720)
T ss_pred HHHHHHHHHHHHhCCC-ceEEEeCChhHHHHHHHHHhc----CCCCEEEeecccHHHHHHHHHHHc---CCeEEEeeccc
Confidence 5788999999999998 468999999999999999988 8999999999999999985 7777 99999987652
Q ss_pred --C---CCCCHHH-----HHHHhcCC----------ceEEEEecccCcccccccHHHHHHH-HHhcCcEEEEecccccCc
Q psy8850 121 --N---GLITLSQ-----LEEKICSD----------TILVSVMLVNNEIGVIQPILEIGEL-CRSKGVIFHCDAAQAVGK 179 (397)
Q Consensus 121 --~---~~~d~~~-----l~~~i~~~----------~~~v~~~~~~~~tG~~~~l~~i~~l-~~~~gi~livD~a~~~~~ 179 (397)
. +.++.+. ++++|.+. .+++++++++ .-|.+++++.|+++ ++.++ +|++|+||+...
T Consensus 247 n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pT-YdG~~ydi~~I~~~~~h~~~-~llvDEAhgah~ 324 (720)
T PRK13578 247 NPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGT-YDGTIYNARQVVDKIGHLCD-YILFDSAWVGYE 324 (720)
T ss_pred cccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCC-CcceeecHHHHHHHhhccCC-cEEEeCcchhhh
Confidence 2 3566555 88888654 4788888775 45999999999998 68888 999999998322
Q ss_pred --cc------cccCccccc----EEEecccc-ccCCCCceEEEEecCCCC---------ccccccccCCccccccCCCCc
Q psy8850 180 --ID------INIQNYKVD----LMSFSAHK-IYGPKGIGALYIRRNPRT---------RIEAQIHGGGHEYGLRSGTLA 237 (397)
Q Consensus 180 --~~------~~~~~~~~d----~~~~s~~K-~~g~~g~g~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~ 237 (397)
.+ ......++| +++.|.|| +.+....+++.+++..+. ++...+ .-+.+++|+
T Consensus 325 ~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~alTQaS~LHvk~~~i~g~~~~v~~~r~~~al------~m~qSTSPs 398 (720)
T PRK13578 325 QFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNHIKGQARYCPHKRLNNAF------MLHASTSPF 398 (720)
T ss_pred ccCcccccCChhhhhcCCCCCCeEEEEChhhcchhhhhHhhhhcCCcccccccccCCHHHHHHHH------HHHcCCChH
Confidence 11 111234788 99999999 777777888888764432 122111 113456777
Q ss_pred hhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH-hhhcCcEEEeC
Q psy8850 238 THQIVGMGEAFRLARI-EMKEELKRILFLQKRLYNGL-MESIEEIYING 284 (397)
Q Consensus 238 ~~~~~~l~~al~~~~~-~~~~~~~~~~~~~~~l~~~l-~~~~~~~~~~~ 284 (397)
+..++++..+...+.. .-..+.+...+.+..+++.| +. .+++.++.
T Consensus 399 Y~LmASLDva~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~-~~~~~~~~ 446 (720)
T PRK13578 399 YPLFAALDVNAKMHEGESGRRLWMECVKLGIEARKLILAR-CKLIRPFI 446 (720)
T ss_pred HHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHh-CCCeeecc
Confidence 8888888777777654 45667777888888888888 44 77777664
No 318
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.85 E-value=1.9e-18 Score=164.49 Aligned_cols=328 Identities=13% Similarity=0.117 Sum_probs=199.4
Q ss_pred CCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccC
Q psy8850 6 TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKR 85 (397)
Q Consensus 6 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~ 85 (397)
.+..+|.|.+++.+++..... ..+ ....+...++.+.|+++++...+.++|++||++|++.+++... .++++
T Consensus 85 lGh~~p~v~~Ai~~ql~~~~~-~~~------~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr-~~tgr 156 (459)
T PRK06082 85 LGYGHPHVIEKVKEQMAKLPF-SPR------RFTNETAIECAEKLTEIAGGELNRVLFAPGGTSAIGMALKLAR-HITGN 156 (459)
T ss_pred cCCCCHHHHHHHHHHHHhCCC-ccC------ccCCHHHHHHHHHHHHhCCCCCCEEEECCCcHHHHHHHHHHHH-HhcCC
Confidence 345789999999999976321 111 1123456788888999886444589999999999999999544 44344
Q ss_pred CCEEEEcCCCChh-hHHHHHHHhhC----C-----cEEEEeccCCCC-----CC------CHHHHHHHhc--CCceEEEE
Q psy8850 86 GKHIITVQTEHKS-VLDSIRKLEND----G-----FRVTYLKPKNNG-----LI------TLSQLEEKIC--SDTILVSV 142 (397)
Q Consensus 86 g~~vl~~~~~~~s-~~~~~~~~~~~----g-----~~v~~v~~~~~~-----~~------d~~~l~~~i~--~~~~~v~~ 142 (397)
.+|+.....|++ +..++...... + ..+..+|..... .. +++.+++.+. .++.+|++
T Consensus 157 -~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~vAavIv 235 (459)
T PRK06082 157 -FKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEKEGGIGAFIA 235 (459)
T ss_pred -CEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhcCCCEEEEEE
Confidence 555555554444 44444322110 0 112333322110 01 1355777775 36789999
Q ss_pred ecccCccccccc---HHHHHHHHHhcCcEEEEeccccc-Ccc----ccccCcccccEEEecccc-ccCC-CCceEEEEec
Q psy8850 143 MLVNNEIGVIQP---ILEIGELCRSKGVIFHCDAAQAV-GKI----DINIQNYKVDLMSFSAHK-IYGP-KGIGALYIRR 212 (397)
Q Consensus 143 ~~~~~~tG~~~~---l~~i~~l~~~~gi~livD~a~~~-~~~----~~~~~~~~~d~~~~s~~K-~~g~-~g~g~~~~~~ 212 (397)
+.+++..+.+.| ++++.++|++||+++|+|++++. |.. ........+|+++++ | +.|+ ..+|.+++++
T Consensus 236 EPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~fa~e~~gv~PDiv~~g--Kgl~gG~~P~~av~~~~ 313 (459)
T PRK06082 236 EAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWFTHQAYGIEPDILCIG--KGLGGGLVPIAAMITKD 313 (459)
T ss_pred CCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHhHhhCCCCCEEEec--ccccCCCCcceEEEEcH
Confidence 988876444455 79999999999999999999872 221 112223468999865 9 6554 2578888886
Q ss_pred CCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCc
Q psy8850 213 NPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPH 292 (397)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 292 (397)
+...... . .... ++.+. +...+++..++++.+.+ +++.++..++.++|++.|++......++..- ...+.
T Consensus 314 ~i~~~~~----~-~~~~-~T~~g-npl~~aaa~a~L~~l~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v-rG~Gl 383 (459)
T PRK06082 314 KYNTAAQ----I-SLGH-YTHEK-SPLGCAAALATIEVIEQ--EGLLEKVKADSQFMRERLLEMKAKYPLIGDV-RGIGL 383 (459)
T ss_pred HHHhhcc----C-CCCC-CCCCc-CHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHhhCCCeeee-eeccc
Confidence 5432221 1 0111 23333 44455555578887765 3567788888888888887621212222111 11245
Q ss_pred eEEEEecCCC---------hHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHH
Q psy8850 293 NLNISFNFIE---------GESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDF 361 (397)
Q Consensus 293 ~~~~~~~~~~---------~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~ 361 (397)
++.+.|.... ...+...+. |+.+.+. .++.+|++++..+++++||+
T Consensus 384 ~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~-----------------------~~~~i~~~Ppl~it~~eid~ 440 (459)
T PRK06082 384 LWGVELVTDRHTKERAYDEAEAVLYRCLNNGLSFKVS-----------------------QGNVIQLSPPLIITREELTQ 440 (459)
T ss_pred eeEEEEccCccccCccHHHHHHHHHHHHhCCCEEEec-----------------------CCCEEEEeCCCccCHHHHHH
Confidence 5566664211 112332222 5555421 13789999999999999999
Q ss_pred HHHHHHHHHHHHHhcC
Q psy8850 362 TIKLLKMKVKKLRELS 377 (397)
Q Consensus 362 ~~~~l~~~~~~~~~~~ 377 (397)
+++++.+++.++.+++
T Consensus 441 ~~~~l~~~l~~~~~~~ 456 (459)
T PRK06082 441 ALAILEEAIAKICQDF 456 (459)
T ss_pred HHHHHHHHHHHHhhhc
Confidence 9999999998875543
No 319
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.84 E-value=4.8e-18 Score=161.54 Aligned_cols=326 Identities=15% Similarity=0.084 Sum_probs=196.3
Q ss_pred CCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCC--CCc-EEEeCChhHHHHHHHHHhHhhh
Q psy8850 6 TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYAD--PRE-IIWTSGATESNNLAIKGAAHFY 82 (397)
Q Consensus 6 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~--~~~-i~~~~g~t~a~~~~l~~l~~~~ 82 (397)
.+..+|.|.+++.+++.... . .+. .+...+...++.+.|++++... ... +++++||++|++.+++... .+
T Consensus 53 lGh~~p~i~~ai~~q~~~~~-~----~~~-~~~~~~~~~~lae~L~~~~p~~~~~~~~~f~~~sGsEA~e~AlklAr-~~ 125 (442)
T TIGR00709 53 LGHNHPNMKQKILDYLQSGL-P----LHT-LDLTTPLKDAFIEALLNIIPKRKMDYKLQFPGPSGADAVEAAIKLAK-TY 125 (442)
T ss_pred CCCCCHHHHHHHHHHHHhcc-C----ccc-cccCcHHHHHHHHHHHHhCCCcCCCccEEEeCCCHHHHHHHHHHHHH-Hh
Confidence 35678999999999987621 0 111 1122345667788888887532 124 4556999999999999544 44
Q ss_pred ccCCCEEEEcCCCChhhHHHHHHHhh-----CC-----cEEEEeccCCCCCC--------C----HHHHHHHhc------
Q psy8850 83 KKRGKHIITVQTEHKSVLDSIRKLEN-----DG-----FRVTYLKPKNNGLI--------T----LSQLEEKIC------ 134 (397)
Q Consensus 83 ~~~g~~vl~~~~~~~s~~~~~~~~~~-----~g-----~~v~~v~~~~~~~~--------d----~~~l~~~i~------ 134 (397)
++ +.+|+....+|++.......+.. .+ ..+..+|....... + .+.+++.+.
T Consensus 126 tg-r~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (442)
T TIGR00709 126 TG-RTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIEYFENFIEDVESGV 204 (442)
T ss_pred cC-CCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhccCC
Confidence 44 45677666666666544443311 01 12333443321111 1 122344442
Q ss_pred CCceEEEEecccCccccccc----HHHHHHHHHhcCcEEEEecccc-cCcc----ccccCcccccEEEecccc-ccCCCC
Q psy8850 135 SDTILVSVMLVNNEIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKI----DINIQNYKVDLMSFSAHK-IYGPKG 204 (397)
Q Consensus 135 ~~~~~v~~~~~~~~tG~~~~----l~~i~~l~~~~gi~livD~a~~-~~~~----~~~~~~~~~d~~~~s~~K-~~g~~g 204 (397)
+++.+|+++.+++..|.+.+ ++++.++|++||+++|.|+++. +|.. ..+.....+|++++| | +.++..
T Consensus 205 ~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~g--K~l~~G~P 282 (442)
T TIGR00709 205 DKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMFAFEHAGIEPDFVVMS--KAVGGGLP 282 (442)
T ss_pred CceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHHcCCCCcEEEEc--ccccCCcc
Confidence 46789999999988887754 7899999999999999999987 3321 111223468999976 9 655455
Q ss_pred ceEEEEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeC
Q psy8850 205 IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYING 284 (397)
Q Consensus 205 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 284 (397)
+|+++++++ ...+.... ...+.+ .|...+++..++++.+.+ ..+.++.+++.++|++.|++......++.
T Consensus 283 igav~~~~~-~~~~~~~~------~~~T~~-gnpla~aaa~a~L~~i~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~v~ 352 (442)
T TIGR00709 283 LAVLLIAPE-FDAWQPAG------HTGTFR-GNQLAMVTGTEALNYWKD--DNLAQNAQERGERITSFLDDMIKEHPCIG 352 (442)
T ss_pred cEEEEEchH-HhccCCCc------CCCCCC-cCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHHhCCCee
Confidence 899998876 33332211 112233 344455555578887655 35667788888888888876111222222
Q ss_pred CCCCCCCceEEEEecCCC---------------hHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEE
Q psy8850 285 DMNNRIPHNLNISFNFIE---------------GESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIR 347 (397)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~---------------~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iR 347 (397)
+ -...+.++.+.|.... ...+...+. |+.+.+.. ..++.||
T Consensus 353 ~-vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~---------------------~~~~~l~ 410 (442)
T TIGR00709 353 N-VRGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACFENGLLLETGG---------------------REGEVFR 410 (442)
T ss_pred e-eeccceEEEEEEccCcccccccccCCcchHHHHHHHHHHHHCCeEEeecC---------------------CCCCEEE
Confidence 1 1122455556663210 122333332 66654321 0137899
Q ss_pred EeeCCCCCHHHHHHHHHHHHHHHHHH
Q psy8850 348 FTIGRFTTEKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 348 i~~~~~~~~~~i~~~~~~l~~~~~~~ 373 (397)
+.++..+|++|+|++++++.+++.++
T Consensus 411 ~~Ppl~it~~ei~~~~~~l~~~l~~~ 436 (442)
T TIGR00709 411 LLCPITIDQEECEEGISRFKQAVEEA 436 (442)
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999776
No 320
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.84 E-value=2.7e-18 Score=163.92 Aligned_cols=326 Identities=14% Similarity=0.149 Sum_probs=193.2
Q ss_pred CCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCC-CcEEEeCChhHHHHHHHHHhHhhhcc
Q psy8850 6 TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADP-REIIWTSGATESNNLAIKGAAHFYKK 84 (397)
Q Consensus 6 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~-~~i~~~~g~t~a~~~~l~~l~~~~~~ 84 (397)
.+..+|.|.+++++++..... .. ......+...++.+.|+++++... +.++|++||++|++.+++.. +.+++
T Consensus 68 lGh~~p~v~~ai~~q~~~~~~-~~-----~~~~~~~~~~~la~~L~~~~p~~~~~~v~f~~sGseA~e~AlklA-r~~tg 140 (451)
T PRK06918 68 VGHSHPKVKEALHKQVDQYIH-TG-----FNVMMYEPYIELAEKLAALAPGSFDKKVLFLNSGAEAVENAVKIA-RKYTK 140 (451)
T ss_pred CCCCCHHHHHHHHHHHHhccC-cc-----ccccccHHHHHHHHHHHHhCCCCCCCEEEEcCCcHHHHHHHHHHH-HHHhC
Confidence 346789999999999876321 00 001113456778888888876432 47999999999999999964 44444
Q ss_pred CCCEEEEcCCCChhhHHHHHHHhh-C-------C---cEEEEeccCC-----CCCCC-------HHHHHHHh-----cCC
Q psy8850 85 RGKHIITVQTEHKSVLDSIRKLEN-D-------G---FRVTYLKPKN-----NGLIT-------LSQLEEKI-----CSD 136 (397)
Q Consensus 85 ~g~~vl~~~~~~~s~~~~~~~~~~-~-------g---~~v~~v~~~~-----~~~~d-------~~~l~~~i-----~~~ 136 (397)
+ .+|+....+|++.......+.. . + ..+..+|... .+... ++.+++.+ .++
T Consensus 141 r-~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (451)
T PRK06918 141 R-QGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEVAPET 219 (451)
T ss_pred C-CcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHhhcCCCc
Confidence 4 5566666555555433322211 0 0 1123333321 11000 22344433 146
Q ss_pred ceEEEEecccCccccccc----HHHHHHHHHhcCcEEEEecccc-cCcc--ccccCcc--cccEEEecccc-ccCCCCce
Q psy8850 137 TILVSVMLVNNEIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKI--DINIQNY--KVDLMSFSAHK-IYGPKGIG 206 (397)
Q Consensus 137 ~~~v~~~~~~~~tG~~~~----l~~i~~l~~~~gi~livD~a~~-~~~~--~~~~~~~--~~d~~~~s~~K-~~g~~g~g 206 (397)
+.+|+++.++...|.+.| +++|.++|++||+++|+|+++. ++.. .+.+..+ .+|+++ ++| +.++..+|
T Consensus 220 iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~~a~~~~~v~pDi~t--~sK~l~~G~pig 297 (451)
T PRK06918 220 IAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKYFAIEHFDVVPDLIT--VSKSLGAGVPIS 297 (451)
T ss_pred eEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCceehhHhcCCCCCEEe--eehhhcCCCccE
Confidence 789999988877787666 6889999999999999999987 2221 1222222 378665 559 55444589
Q ss_pred EEEEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---cCcEEEe
Q psy8850 207 ALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMES---IEEIYIN 283 (397)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~ 283 (397)
+++++++..+.+.+...+ ...+ .+.....+..++++.+.+ ..+.++.+++.+++.+.|++. .+.+..+
T Consensus 298 ~v~~~~~i~~~~~~~~~~------~T~~-g~~l~~aaa~a~l~~i~~--~~~~~~~~~~g~~l~~~l~~l~~~~~~~~~v 368 (451)
T PRK06918 298 GVIGRKEIMDESAPGELG------GTYA-GSPLGCAAALAVLDIIEK--ENLNDRAIELGKVVMNRFEEMKNKYNCIGDV 368 (451)
T ss_pred EEEEcHHHHhccCCCCcC------cCCC-cCHHHHHHHHHHHHHHHH--CCHHHHHHHHHHHHHHHHHHHHhhCCCceee
Confidence 999987765555432211 2222 334445554577777754 234555666666666666551 2221112
Q ss_pred CCCCCCCCceEEEEec-C----CC----hHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCC
Q psy8850 284 GDMNNRIPHNLNISFN-F----IE----GESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGR 352 (397)
Q Consensus 284 ~~~~~~~~~~~~~~~~-~----~~----~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~ 352 (397)
... +.++.+.+. + .+ ...+...+. |+.+.++..+ ++.+||+++.
T Consensus 369 rg~----G~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gvlv~~~~~~---------------------~~~lrl~p~l 423 (451)
T PRK06918 369 RGL----GAMCAFELVQDRKTKEPDKTLTANICKEANKRGLLLLSAGTY---------------------GNVIRVLMPL 423 (451)
T ss_pred ccc----eeEEEEEEccCCCcCCCcHHHHHHHHHHHHHCCeEEeecCCC---------------------CCEEEEECCC
Confidence 111 333344342 1 11 123333333 7877765211 2789999988
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHh
Q psy8850 353 FTTEKEIDFTIKLLKMKVKKLRE 375 (397)
Q Consensus 353 ~~~~~~i~~~~~~l~~~~~~~~~ 375 (397)
.+++++|++++++|.+++.++.+
T Consensus 424 ~~t~~~id~~l~~l~~~l~~~~~ 446 (451)
T PRK06918 424 VITDEQLEEGLTIIEESLQACYE 446 (451)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999987743
No 321
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.84 E-value=1.2e-18 Score=164.09 Aligned_cols=330 Identities=13% Similarity=0.084 Sum_probs=201.1
Q ss_pred CCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhc--
Q psy8850 6 TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYK-- 83 (397)
Q Consensus 6 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~-- 83 (397)
.+..+|++.+++.+++.... .... .....+...++.+.|+++.+...+.++|++||++|++.+++....+..
T Consensus 54 lGh~~p~i~~ai~~q~~~~~-~~~~-----~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AlklAr~~~~~~ 127 (422)
T PRK05630 54 HGHGHPRLKAAAHKQIDTMS-HVMF-----GGLTHEPAIKLTRKLLNLTDNGLDHVFYSDSGSVSVEVAIKMALQYSKGQ 127 (422)
T ss_pred CCCCCHHHHHHHHHHHHhCC-Cccc-----CCcCCHHHHHHHHHHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhc
Confidence 35678999999999998632 1110 001123456778888888754445899999999999999996543321
Q ss_pred --cCCCEEEEcCCCChhhH-HHHHHHhhC-------C---cEEEEeccCCCCCCC-------HHHHHHHhcCCceEEEEe
Q psy8850 84 --KRGKHIITVQTEHKSVL-DSIRKLEND-------G---FRVTYLKPKNNGLIT-------LSQLEEKICSDTILVSVM 143 (397)
Q Consensus 84 --~~g~~vl~~~~~~~s~~-~~~~~~~~~-------g---~~v~~v~~~~~~~~d-------~~~l~~~i~~~~~~v~~~ 143 (397)
..+.+|+....+|++.. .+....... + ..+..+|.......+ .+.+++.+.+++.+|+++
T Consensus 128 g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvi~E 207 (422)
T PRK05630 128 GHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVRGSSPQEISEYLRSLELLIDETVAAIIIE 207 (422)
T ss_pred CCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcccCCChHHHHHHHHHHHHHHhhceEEEEEe
Confidence 12356777666666544 332221100 0 112333332111111 245566666789999999
Q ss_pred cc-cCccccccc----HHHHHHHHHhcCcEEEEecccc-cCcc----ccccCcccccEEEecccc-ccCC-CCceEEEEe
Q psy8850 144 LV-NNEIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKI----DINIQNYKVDLMSFSAHK-IYGP-KGIGALYIR 211 (397)
Q Consensus 144 ~~-~~~tG~~~~----l~~i~~l~~~~gi~livD~a~~-~~~~----~~~~~~~~~d~~~~s~~K-~~g~-~g~g~~~~~ 211 (397)
.. +...|.+.| ++++.++|++||+++|+|+++. +|.. ..+.....+|+++++ | +.|+ ..+|+++++
T Consensus 208 Pi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDi~t~g--K~l~gG~~p~~av~~~ 285 (422)
T PRK05630 208 PIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELFATLAAGVTPDIMCVG--KALTGGFMSFAATLCT 285 (422)
T ss_pred chhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchhhHHHhcCCCCCeeeee--chhhcCccccceeecc
Confidence 85 888887665 6899999999999999999985 2221 112233468999776 9 6443 347888888
Q ss_pred cCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCC
Q psy8850 212 RNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIP 291 (397)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 291 (397)
++..+.+......+......+. ..+...+++..++++.+.+. ...+++.++.++|++.|++ +.....+.+ -...+
T Consensus 286 ~~i~~~~~~~~~~~~~~h~~T~-~g~Pla~aaa~aaL~~l~~~--~~~~~~~~~g~~l~~~L~~-l~~~~~v~~-vRg~G 360 (422)
T PRK05630 286 DKVAQLISTPNGGGALMHGPTF-MANPLACAVAHASLEIIETG--MWRKQVKRIEAELIAGLSP-LAHLPGVAD-VRVLG 360 (422)
T ss_pred HHHHHHHhccCCCCccccCCCC-cCCHHHHHHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHH-hhcCCCeee-eeccc
Confidence 7655443211000000011122 24555666666888888653 4556777777888877765 322111111 11124
Q ss_pred ceEEEEecCC-ChHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHH
Q psy8850 292 HNLNISFNFI-EGESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 368 (397)
Q Consensus 292 ~~~~~~~~~~-~~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~ 368 (397)
.++.+.+... +...+...+. |+.+.+. ++.+||.++..+|++|||+++++|.+
T Consensus 361 l~~~ie~~~~~~~~~~~~~~~~~Gl~~~~~------------------------g~~l~~~PpL~it~~~i~~~~~~l~~ 416 (422)
T PRK05630 361 AIGVVEMEQPVDMEEATQAAVDHGVWLRPF------------------------GRLVYVMPPYITTSEQIAQICAALAA 416 (422)
T ss_pred cEEEEEECCcccHHHHHHHHHHCCeEEEec------------------------CCEEEEECCccCCHHHHHHHHHHHHH
Confidence 5666666532 2345555554 6666431 27899999999999999999999999
Q ss_pred HHHH
Q psy8850 369 KVKK 372 (397)
Q Consensus 369 ~~~~ 372 (397)
+++.
T Consensus 417 al~~ 420 (422)
T PRK05630 417 AVKA 420 (422)
T ss_pred HHhc
Confidence 8854
No 322
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.84 E-value=2e-18 Score=164.48 Aligned_cols=332 Identities=14% Similarity=0.129 Sum_probs=205.2
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhh----
Q psy8850 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFY---- 82 (397)
Q Consensus 7 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~---- 82 (397)
+..+|.|.+++.+++..... .. .. + ...+...++.+.|++++....+.++|++||++|++.+++.....+
T Consensus 71 Gh~~p~v~~Ai~~ql~~l~~-~~--~~--~-~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlklAr~~~~~~g 144 (460)
T PRK06916 71 GHQVPELDEAIREQLNKIAH-ST--LL--G-LANVPSILLAEKLIEVVPEGLKKVFYSDSGATAVEIAIKMAFQYWQNKG 144 (460)
T ss_pred CCCCHHHHHHHHHHHHhCCC-cc--cc--c-cCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcC
Confidence 56789999999999986321 11 00 1 112345678888888876444579999999999999999655322
Q ss_pred ccCCCEEEEcCCCChhhHHHHHHHhhC-C---------cEEEEeccCCC-----C-C------CCHHHHHHHhc---CCc
Q psy8850 83 KKRGKHIITVQTEHKSVLDSIRKLEND-G---------FRVTYLKPKNN-----G-L------ITLSQLEEKIC---SDT 137 (397)
Q Consensus 83 ~~~g~~vl~~~~~~~s~~~~~~~~~~~-g---------~~v~~v~~~~~-----~-~------~d~~~l~~~i~---~~~ 137 (397)
...+.+|+....+|++.......+... . ..+..+|.... + . -+++++++.+. +++
T Consensus 145 ~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~i 224 (460)
T PRK06916 145 KPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKEKHEEI 224 (460)
T ss_pred CCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHhCCCcE
Confidence 122467777777666654333322110 0 11233433210 0 0 13566777775 468
Q ss_pred eEEEEec-ccCccccccc----HHHHHHHHHhcCcEEEEecccc-cCcc----ccccCcccccEEEecccc-ccCC-CCc
Q psy8850 138 ILVSVML-VNNEIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKI----DINIQNYKVDLMSFSAHK-IYGP-KGI 205 (397)
Q Consensus 138 ~~v~~~~-~~~~tG~~~~----l~~i~~l~~~~gi~livD~a~~-~~~~----~~~~~~~~~d~~~~s~~K-~~g~-~g~ 205 (397)
.+|+++. ++...|.+.| ++.+.++|++||+++|+|+++. +|.. ..+.....+|+++++ | +.|+ ..+
T Consensus 225 AAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~~a~~~~gv~PDiv~~g--K~l~gG~~Pi 302 (460)
T PRK06916 225 AAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKMFACEHENVTPDIMTAG--KGLTGGYLPI 302 (460)
T ss_pred EEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCchhhHHHhcCCCCCeeeee--hhhhcCcccc
Confidence 8999998 5888888765 7899999999999999999976 3222 112223468999877 9 6554 358
Q ss_pred eEEEEecCCCCccccccc-cCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeC
Q psy8850 206 GALYIRRNPRTRIEAQIH-GGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYING 284 (397)
Q Consensus 206 g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 284 (397)
|+++++++..+.+..... ........+.+. |...+++..++++.+.+ ..+.++++++.+++++.|++ +.....+.
T Consensus 303 ~av~~~~ei~~~~~~~~~~~~~~~~~~T~~g-npl~~aaa~a~l~~l~~--~~l~~~~~~~g~~l~~~l~~-l~~~~~v~ 378 (460)
T PRK06916 303 AITVTTDEIYNAFYGDYEEQKTFFHGHSYTG-NPLGCAVALANLELYEK--TNLIEQVARKTEYVATQLED-LFALKHVG 378 (460)
T ss_pred ceeeecHHHHHHhhccccccCccccCCCCCC-CHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHH-hhcCCCeE
Confidence 999998765544321100 000011122333 44555555678887765 45678888888888888877 43222121
Q ss_pred CCCCCCCceEEEEecCCC------------hHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEee
Q psy8850 285 DMNNRIPHNLNISFNFIE------------GESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTI 350 (397)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~------------~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~ 350 (397)
+ -...+.++-+.+.... ...+...+. |+.+.+. ++.+|+.+
T Consensus 379 ~-vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~------------------------g~~l~~~P 433 (460)
T PRK06916 379 D-IRQLGLMVGIELVKNKETKEPFEWTERVGVQVCKRSRELGMLTRPL------------------------GNTIVFMP 433 (460)
T ss_pred E-eecCCceeeEEeecccccccCCCchhhHHHHHHHHHHHCCeEEEec------------------------CCEEEEeC
Confidence 1 1112344455553210 123433333 6666432 26899999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHh
Q psy8850 351 GRFTTEKEIDFTIKLLKMKVKKLRE 375 (397)
Q Consensus 351 ~~~~~~~~i~~~~~~l~~~~~~~~~ 375 (397)
+..++++|||+++++|.++++++.+
T Consensus 434 pl~it~~~id~~~~~l~~~l~~~~~ 458 (460)
T PRK06916 434 PLASTIDELDEMLRILYKAISDVTE 458 (460)
T ss_pred CcccCHHHHHHHHHHHHHHHHhhcc
Confidence 9999999999999999999987654
No 323
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.84 E-value=7.1e-18 Score=160.03 Aligned_cols=323 Identities=18% Similarity=0.153 Sum_probs=199.0
Q ss_pred CCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCC-CCcEEEeCChhHHHHHHHHHhHhhhcc
Q psy8850 6 TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYAD-PREIIWTSGATESNNLAIKGAAHFYKK 84 (397)
Q Consensus 6 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~-~~~i~~~~g~t~a~~~~l~~l~~~~~~ 84 (397)
.+..+|.+.+++.+++.... .... .....+...++.+.|++++..+ .+.++|++||++|++.+++... .+++
T Consensus 68 lGh~~p~v~~Ai~~ql~~~~-~~~~-----~~~~~~~~~~lAe~L~~~~p~~~~~~v~f~~SGsEA~e~AlklAr-~~tg 140 (441)
T PRK05769 68 VGHAHPKVVKAVKEQAEKFL-HYSL-----TDFYYEPAVELAERLVEIAPGGFEKKVFFTNSGTESNEAAIKIAR-YHTG 140 (441)
T ss_pred cCCCCHHHHHHHHHHHHhcc-CccC-----cccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHH-HHhC
Confidence 34568999999999997622 1110 0011234567888888887532 3579999999999999999544 4444
Q ss_pred CCCEEEEcCCCChhhHHHHHHHhh--C---------CcEEEEeccCCCCC-------------CCHHHHHH-Hh-----c
Q psy8850 85 RGKHIITVQTEHKSVLDSIRKLEN--D---------GFRVTYLKPKNNGL-------------ITLSQLEE-KI-----C 134 (397)
Q Consensus 85 ~g~~vl~~~~~~~s~~~~~~~~~~--~---------g~~v~~v~~~~~~~-------------~d~~~l~~-~i-----~ 134 (397)
+++|+....+|++.......+.. . ...+..+|.+.... -+++.+++ .+ .
T Consensus 141 -r~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~ 219 (441)
T PRK05769 141 -RKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPP 219 (441)
T ss_pred -CCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhccCC
Confidence 46677766666665543332210 0 01233444422110 01344665 22 2
Q ss_pred CCceEEEEecccCccccccc----HHHHHHHHHhcCcEEEEecccc-cCccc--c--ccCcccccEEEecccc-ccCCCC
Q psy8850 135 SDTILVSVMLVNNEIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKID--I--NIQNYKVDLMSFSAHK-IYGPKG 204 (397)
Q Consensus 135 ~~~~~v~~~~~~~~tG~~~~----l~~i~~l~~~~gi~livD~a~~-~~~~~--~--~~~~~~~d~~~~s~~K-~~g~~g 204 (397)
+++.+|+++.+....|.+.| ++++.++|++||+++|+|++++ +|... + ......+|++++| | +.++.+
T Consensus 220 ~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~a~~~~gv~pDivt~~--K~l~~G~p 297 (441)
T PRK05769 220 EEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGKMFAIEHFGVEPDIITLA--KAIAGGLP 297 (441)
T ss_pred CceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccceehhhccCCCCCEEEEc--ccccCCcc
Confidence 46789999999999999888 8999999999999999999987 32211 1 1112357888765 9 554445
Q ss_pred ceEEEEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeC
Q psy8850 205 IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYING 284 (397)
Q Consensus 205 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 284 (397)
+|+++++++..... ...+ ....+. +...+++..++++.+.+ ++.++..++.++|++.|++......+..
T Consensus 298 ~gav~~~~~i~~~~-~~~~------~~T~~g-~p~~~aaa~a~L~~l~~---~~~~~~~~~g~~l~~~L~~l~~~~~~~~ 366 (441)
T PRK05769 298 LGAVIGRAELMFLP-PGSH------ANTFGG-NPVAAAAALATLEELEE---GLLENAQKLGEYLRKELKELKEKYEFIG 366 (441)
T ss_pred cEEEEEehhhhhcC-CCCC------CCCCCc-CHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHhCCCee
Confidence 78888887654322 1111 122233 44455555578887764 6778888888888888876211122221
Q ss_pred CCCCCCCceEEEEecCCC-------hHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCC
Q psy8850 285 DMNNRIPHNLNISFNFIE-------GESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTT 355 (397)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~-------~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~ 355 (397)
. ....+.++.+.|.... ...+...+. |+.+.+. +.+.+|++++..+|
T Consensus 367 ~-vrg~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Gil~~~~-----------------------~~~~lr~~p~l~~t 422 (441)
T PRK05769 367 D-VRGLGLMIGVELVKDRKEPDPKLRDKVLYEAFKRGLLLLGA-----------------------GKSAIRIIPPLIIT 422 (441)
T ss_pred e-eecceEEEEEEeccCCccccHHHHHHHHHHHHhCCcEEecC-----------------------CCCEEEEeCCCCCC
Confidence 1 1112445555663221 123333332 6665431 12679999999999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q psy8850 356 EKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 356 ~~~i~~~~~~l~~~~~~~ 373 (397)
++|||+++++|.+++.++
T Consensus 423 ~~~id~~~~~l~~~l~~~ 440 (441)
T PRK05769 423 EEEADIGLEILEEAIKEL 440 (441)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999999998653
No 324
>PRK07482 hypothetical protein; Provisional
Probab=99.84 E-value=2e-18 Score=164.59 Aligned_cols=334 Identities=12% Similarity=0.062 Sum_probs=202.2
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhc---
Q psy8850 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYK--- 83 (397)
Q Consensus 7 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~--- 83 (397)
+..+|+|.+++++++.... ..+ .......+...++.+.|++++....+.++|++|||+|++.+++....+..
T Consensus 65 Gh~~p~v~~Av~~q~~~~~-~~~----~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g 139 (461)
T PRK07482 65 GYGRTEVAEAIAEQAKELA-YYH----TYVGHGTEASITLSKRIIDRAPAGMSKVYYGLSGSDANETQIKLVWYYNNVLG 139 (461)
T ss_pred CCCCHHHHHHHHHHHHhcC-ccc----cccccCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHHHHhcC
Confidence 4678999999999998631 101 01011234567788888888754445799999999999999996643221
Q ss_pred -cCCCEEEEcCCCChhhHHHHHHHhh-------CC---cEEEEeccCC--CC-----------CCCHHHHHHHhc----C
Q psy8850 84 -KRGKHIITVQTEHKSVLDSIRKLEN-------DG---FRVTYLKPKN--NG-----------LITLSQLEEKIC----S 135 (397)
Q Consensus 84 -~~g~~vl~~~~~~~s~~~~~~~~~~-------~g---~~v~~v~~~~--~~-----------~~d~~~l~~~i~----~ 135 (397)
..+.+|+....+|++.......+.. .+ ..+..++... .. .-+++++++.+. +
T Consensus 140 ~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 219 (461)
T PRK07482 140 RPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEELILAEGPD 219 (461)
T ss_pred CCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCC
Confidence 1246777776666664332221110 01 1122232221 10 013577787773 4
Q ss_pred CceEEEEecccCccccccc----HHHHHHHHHhcCcEEEEecccc-cCcc----ccccCcccccEEEecccc-ccCC-CC
Q psy8850 136 DTILVSVMLVNNEIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKI----DINIQNYKVDLMSFSAHK-IYGP-KG 204 (397)
Q Consensus 136 ~~~~v~~~~~~~~tG~~~~----l~~i~~l~~~~gi~livD~a~~-~~~~----~~~~~~~~~d~~~~s~~K-~~g~-~g 204 (397)
++.+|+++.++...|.+.| +++|.++|++||+++|+|+++. +|-. ..+.....+|+++++ | +.|+ .+
T Consensus 220 ~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~g--Kgl~gG~~P 297 (461)
T PRK07482 220 TIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGSMFGSDHYGIEPDLITVA--KGLTSAYAP 297 (461)
T ss_pred cEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcchhhHHhcCCCCCEEEEc--cccccCccc
Confidence 5889999999988888765 7899999999999999999987 3322 122233468999987 9 6554 25
Q ss_pred ceEEEEecCCCCccccccc-cCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEe
Q psy8850 205 IGALYIRRNPRTRIEAQIH-GGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYIN 283 (397)
Q Consensus 205 ~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 283 (397)
+|.++++++..+.+..... .+......+.+ .|...+++..++++.+.+ +++.++.+++.++|.+.|++......++
T Consensus 298 i~av~~~~~i~~~~~~~~~~~~~~~h~~T~~-gnpl~~Aaa~a~L~~~~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~v 374 (461)
T PRK07482 298 LSGSIVGEKVWDVLEQGSDEHGAIGHGWTYS-GHPICAAAALANLDILER--ENLVGNAAEVGAYFRARLRAAFGDHPLV 374 (461)
T ss_pred cceeeecHHHHHHHhcccccCCccccCCCCC-cCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHHHHhcCCCE
Confidence 7888888665433321100 01111122233 344555666688888765 4566777777788888776521221111
Q ss_pred CCCCCCCCceEEEEecCCC------------hHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEe
Q psy8850 284 GDMNNRIPHNLNISFNFIE------------GESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFT 349 (397)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~------------~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~ 349 (397)
.. -...+.++-+.+.... ...+...+. |+.+.++. .++.+|+.
T Consensus 375 ~~-vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~~----------------------~~~~i~~~ 431 (461)
T PRK07482 375 GE-VRGVGMLAAVEFVADRDDRTPFDPALKIGPQVSAAALERGVIARAMP----------------------HGDILGFA 431 (461)
T ss_pred EE-EeeceeEEEEEeccCCCcCCCCChhhHHHHHHHHHHHHCCcEEecCC----------------------CCCEEEEe
Confidence 11 0112445556664211 123333333 65553210 12789999
Q ss_pred eCCCCCHHHHHHHHHHHHHHHHHH
Q psy8850 350 IGRFTTEKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 350 ~~~~~~~~~i~~~~~~l~~~~~~~ 373 (397)
++..++++||++++++|.++++++
T Consensus 432 Ppl~it~~ei~~~~~~l~~~l~~~ 455 (461)
T PRK07482 432 PPLVLTRAEADEIVAIAKDAVDEV 455 (461)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999876
No 325
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.84 E-value=2.1e-18 Score=164.10 Aligned_cols=312 Identities=17% Similarity=0.109 Sum_probs=193.3
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCC
Q psy8850 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRG 86 (397)
Q Consensus 7 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g 86 (397)
+..+|.|.+++++++.... .+. ...+...+++++|++++... +.+++++||++|++.+++.... ++ ++
T Consensus 63 Gh~~p~v~~ai~~q~~~~~------~~~---~~~~~~~~lae~l~~~~~~~-~~v~~~~sGseA~e~Alk~ar~-~~-gr 130 (423)
T TIGR00713 63 GHAHPRVVEAVKEALERGT------SYG---APTEAEILLAKEIISRVPSV-EMVRFVNSGTEATMSAVRLARG-YT-GR 130 (423)
T ss_pred CCCCHHHHHHHHHHHHhCC------cCC---CCCHHHHHHHHHHHHhCCcc-cEEEEeCCHHHHHHHHHHHHHH-hh-CC
Confidence 4678999999999997621 111 12345688999999988653 5899999999999999996443 33 45
Q ss_pred CEEEEcCCCChhhHHHHHHHhhCCc-----------------EEEEeccCCCCCCCHHHHHHHhc---CCceEEEEeccc
Q psy8850 87 KHIITVQTEHKSVLDSIRKLENDGF-----------------RVTYLKPKNNGLITLSQLEEKIC---SDTILVSVMLVN 146 (397)
Q Consensus 87 ~~vl~~~~~~~s~~~~~~~~~~~g~-----------------~v~~v~~~~~~~~d~~~l~~~i~---~~~~~v~~~~~~ 146 (397)
++|+...++|++...........+. .+..+|. .|++++++++. +++++|+++...
T Consensus 131 ~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~i~~~~~~~aavi~ep~~ 205 (423)
T TIGR00713 131 DKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPY-----NDLEALEEVFEEYGEEIAGVIVEPVA 205 (423)
T ss_pred CEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCC-----CCHHHHHHHHHHcCCcEEEEEEeCCC
Confidence 8899999988887544332110010 1111221 27899999887 568899887666
Q ss_pred Cccccccc----HHHHHHHHHhcCcEEEEecccccCcc----ccccCcccccEEEecccc-ccCCCCceEEEEecCCCCc
Q psy8850 147 NEIGVIQP----ILEIGELCRSKGVIFHCDAAQAVGKI----DINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTR 217 (397)
Q Consensus 147 ~~tG~~~~----l~~i~~l~~~~gi~livD~a~~~~~~----~~~~~~~~~d~~~~s~~K-~~g~~g~g~~~~~~~~~~~ 217 (397)
+.+|.+.| +++|.++|++||+++|+|++|..... ........+|++ +++| +.++..+|+++++++..+.
T Consensus 206 ~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~~~~~~~~~~~pDi~--t~sK~l~~G~pig~v~~~~~i~~~ 283 (423)
T TIGR00713 206 GNMGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVALGGAQEYFGVEPDLT--TLGKIIGGGLPVGAFGGRREIMER 283 (423)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCcchhHHHhCCCcchh--hhhhhhcCCCceeeeeEHHHHHHh
Confidence 66898877 68999999999999999999963221 111122346765 4669 4433347999998766555
Q ss_pred cccccccCCccccccCCCCchhHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhhhcCcEEE-eCCCCCCCCceE
Q psy8850 218 IEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARI--EMKEELKRILFLQKRLYNGLMESIEEIYI-NGDMNNRIPHNL 294 (397)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~~~~~~~~~~ 294 (397)
+.... ........ ..+...+++..++++.+.+ .+++..+....+++.|.+.+++ . ++.. .... +.++
T Consensus 284 ~~~~~---~~~~~~T~-~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~-~~~~~v~~~----g~~~ 353 (423)
T TIGR00713 284 LAPEG---PVYQAGTL-SGNPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVLED-T-GIPHTVNRV----GSMF 353 (423)
T ss_pred hCcCC---CeeeccCC-CCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHh-c-CCCeEEEee----ccEE
Confidence 54210 00011122 2344555555578887764 2444555555555666665655 3 2222 1111 3444
Q ss_pred EEEecCC-----------Ch---HHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHH
Q psy8850 295 NISFNFI-----------EG---ESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKE 358 (397)
Q Consensus 295 ~~~~~~~-----------~~---~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~ 358 (397)
.+.+... +. ..+...+. |+.+.++. .+.+|+++. +++++
T Consensus 354 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-----------------------~~~~~l~~~--~t~~~ 408 (423)
T TIGR00713 354 SLFFTEEEVTNYADAKKSDTELFAKFFHEMLDKGVFLPPSQ-----------------------FEACFLSAA--HTEED 408 (423)
T ss_pred EEEEecCCCCChhhhhcccHHHHHHHHHHHHHCCeEEecCC-----------------------ccceeeECC--CCHHH
Confidence 4444311 11 13444443 66664321 145788876 68999
Q ss_pred HHHHHHHHHHHHHH
Q psy8850 359 IDFTIKLLKMKVKK 372 (397)
Q Consensus 359 i~~~~~~l~~~~~~ 372 (397)
+++++++|.+++++
T Consensus 409 i~~~~~~l~~~l~~ 422 (423)
T TIGR00713 409 IENTIEAAEEVFAE 422 (423)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999998865
No 326
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.84 E-value=2.2e-18 Score=162.56 Aligned_cols=329 Identities=12% Similarity=0.058 Sum_probs=203.8
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhc---
Q psy8850 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYK--- 83 (397)
Q Consensus 7 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~--- 83 (397)
+..+|+|.+++++++.+.. .... .....+...++.+.|++.+....+.++|++||++|++.+++.....+.
T Consensus 59 Gh~~p~v~~ai~~q~~~~~-~~~~-----~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g 132 (429)
T PRK06173 59 GYNHPRLNAAATNQLAKMS-HIMF-----GGFTHEPAVELAQKLLEILPPSLNKIFFADSGSVAVEVAMKMALQYQQAKG 132 (429)
T ss_pred CCCCHHHHHHHHHHHHhcC-Cccc-----cccCCHHHHHHHHHHHhhCCCCcCEEEEeCCchHHHHHHHHHHHHHHHHhC
Confidence 4668999999999987632 1111 011124456788888888754445799999999999999996553321
Q ss_pred -cCCCEEEEcCCCChhhH-HHHHHHh-----hCC-----cEEEEeccCCCC------CCCHHHHHHHhc---CCceEEEE
Q psy8850 84 -KRGKHIITVQTEHKSVL-DSIRKLE-----NDG-----FRVTYLKPKNNG------LITLSQLEEKIC---SDTILVSV 142 (397)
Q Consensus 84 -~~g~~vl~~~~~~~s~~-~~~~~~~-----~~g-----~~v~~v~~~~~~------~~d~~~l~~~i~---~~~~~v~~ 142 (397)
..+.+|+....+|++.. .++.... +.+ ..+..+|..... .-+++.+++.+. +++.+|++
T Consensus 133 ~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i~~~~~~iAAvi~ 212 (429)
T PRK06173 133 EVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDLLEQKGDEIAALIL 212 (429)
T ss_pred CCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCcccchhHHHHHHHHHHHHHHhCCCcEEEEEE
Confidence 12356777777666643 3322111 000 012333332110 114666777774 46889999
Q ss_pred ecc-cCccccccc----HHHHHHHHHhcCcEEEEecccc-cCcc----ccccCcccccEEEecccc-ccCC-CCceEEEE
Q psy8850 143 MLV-NNEIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKI----DINIQNYKVDLMSFSAHK-IYGP-KGIGALYI 210 (397)
Q Consensus 143 ~~~-~~~tG~~~~----l~~i~~l~~~~gi~livD~a~~-~~~~----~~~~~~~~~d~~~~s~~K-~~g~-~g~g~~~~ 210 (397)
+.+ +...|.+.| ++++.++|++||+++|+|+++. +|.. ..+.....+|+++++ | +.|+ ..++.+++
T Consensus 213 EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv~~g--K~l~gG~~p~~a~~~ 290 (429)
T PRK06173 213 EPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLFALEHAGVVPDIMCIG--KALTGGYLTLSATIT 290 (429)
T ss_pred cchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCcchHHHhcCCCCCEEEee--hhhhCCccccceEEe
Confidence 986 888888755 7899999999999999999985 2221 122223468988865 9 6443 34688888
Q ss_pred ecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCC
Q psy8850 211 RRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRI 290 (397)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~ 290 (397)
+++..+.+.+.. ........+.+ .+...+++..++++.+.+. ...+++.++.++|++.|++ +.+...+.. ....
T Consensus 291 ~~~i~~~~~~~~-~~~~~~~~T~~-g~p~~~aaa~a~l~~i~~~--~~~~~~~~~g~~l~~~L~~-~~~~~~v~~-vRg~ 364 (429)
T PRK06173 291 TEAIAQTICSGE-AKCFMHGPTFM-ANPLACAIAAESIRLLLES--PWQQNIQRIEAQLKQELAP-AAEFDSVAE-VRVL 364 (429)
T ss_pred cHHHHHHHhcCC-CCccccCCCCC-cCHHHHHHHHHHHHHHHhC--CHHHHHHHHHHHHHHHHHH-hhcCCCeee-eecc
Confidence 765544332100 00000111122 3456666666888887653 4577888888888888876 322222211 0112
Q ss_pred CceEEEEecCC-ChHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHH
Q psy8850 291 PHNLNISFNFI-EGESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLK 367 (397)
Q Consensus 291 ~~~~~~~~~~~-~~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~ 367 (397)
+.++.+.+... ....+...+. |+.+.+. ++.|||.++..++++|+|+++++|.
T Consensus 365 Gl~~~iel~~~~~~~~i~~~l~e~Gi~v~~~------------------------g~~l~~~Ppl~it~~ei~~~~~~l~ 420 (429)
T PRK06173 365 GAIGVVEMKEPVNMATLQPRFVEHGIWVRPF------------------------GKLVYIMPPFIISPDELSQLTSGLL 420 (429)
T ss_pred ceEEEEEeCCcccHHHHHHHHHHCCeEEEec------------------------CCEEEEeCCccCCHHHHHHHHHHHH
Confidence 44556666532 2345666664 7766532 2689999999999999999999999
Q ss_pred HHHHHH
Q psy8850 368 MKVKKL 373 (397)
Q Consensus 368 ~~~~~~ 373 (397)
+++.++
T Consensus 421 ~~l~~~ 426 (429)
T PRK06173 421 RVLKQE 426 (429)
T ss_pred HHHHHH
Confidence 998653
No 327
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.84 E-value=1.3e-18 Score=163.91 Aligned_cols=328 Identities=9% Similarity=0.066 Sum_probs=201.2
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhc---
Q psy8850 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYK--- 83 (397)
Q Consensus 7 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~--- 83 (397)
+..+|.+.+++++++.+..... . .....+...++.+.|+++.+...+.++|++||++|++.+++.....+.
T Consensus 58 Gh~~p~i~~Ai~~q~~~~~~~~-~-----~~~~~~~~~~la~~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~~~~~g 131 (428)
T PRK07986 58 GYNHPQLNAAMKSQIDAMSHVM-F-----GGITHPPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWQAKG 131 (428)
T ss_pred CCCCHHHHHHHHHHHhhcCCcc-c-----cccCCHHHHHHHHHHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcC
Confidence 4668999999999987632110 0 011123456677888887754445799999999999999996543221
Q ss_pred cCCCEEEEcCCCChhhHHHHHHHhhC---------C--cEEEEeccCCCC------CCCHHHHHHHhc---CCceEEEEe
Q psy8850 84 KRGKHIITVQTEHKSVLDSIRKLEND---------G--FRVTYLKPKNNG------LITLSQLEEKIC---SDTILVSVM 143 (397)
Q Consensus 84 ~~g~~vl~~~~~~~s~~~~~~~~~~~---------g--~~v~~v~~~~~~------~~d~~~l~~~i~---~~~~~v~~~ 143 (397)
.++.+|+....+|++.......+... + ..+..+|..... .-|++++++.+. +++.+|+++
T Consensus 132 ~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~~~~iaavi~E 211 (428)
T PRK07986 132 EPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAAHRHEIAAVILE 211 (428)
T ss_pred CCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHhCCCcEEEEEEe
Confidence 12467777777666644322221100 0 112233322110 125677888775 357788898
Q ss_pred cc-cCccccccc----HHHHHHHHHhcCcEEEEecccc-cCcc----ccccCcccccEEEecccc-ccCC-CCceEEEEe
Q psy8850 144 LV-NNEIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKI----DINIQNYKVDLMSFSAHK-IYGP-KGIGALYIR 211 (397)
Q Consensus 144 ~~-~~~tG~~~~----l~~i~~l~~~~gi~livD~a~~-~~~~----~~~~~~~~~d~~~~s~~K-~~g~-~g~g~~~~~ 211 (397)
.+ +...|.+.+ +++|.++|++||+++|+|+++. +|.. ..+.....+|+++++ | +.|+ ..+|.++++
T Consensus 212 pi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~fa~~~~gv~PDi~t~g--K~l~gG~~p~~av~~~ 289 (428)
T PRK07986 212 PIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLFACEHAGIAPDILCLG--KALTGGTMTLSATLTT 289 (428)
T ss_pred chhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCeeeecccCCCCCEEEec--hhhhCCcccCcchhch
Confidence 85 677776543 7899999999999999999985 2221 112233468998765 9 6544 357888888
Q ss_pred cCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCC
Q psy8850 212 RNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIP 291 (397)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 291 (397)
++..+.+..... +........+ .+...+++..++++.+.+ .++.++..++.++|++.|++ +.....+.+ -...+
T Consensus 290 ~~i~~~~~~~~~-~~~~~~~T~~-g~p~~~aaa~a~L~~i~~--~~~~~~~~~~g~~l~~~l~~-l~~~~~i~~-vRg~G 363 (428)
T PRK07986 290 REVAETISNGEA-GCFMHGPTFM-GNPLACAVANASLSLLES--GDWQQQVAAIEAQLREELAP-LRDAPMVAD-VRVLG 363 (428)
T ss_pred HHHHHHhhcCCC-CccccCCCCC-cCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHH-HhcCCCEEe-Eeccc
Confidence 765554432110 0000112222 345666666688888765 35678888888888888877 422221211 11113
Q ss_pred ceEEEEecCC-ChHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHH
Q psy8850 292 HNLNISFNFI-EGESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKM 368 (397)
Q Consensus 292 ~~~~~~~~~~-~~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~ 368 (397)
.++.+.+... ....+...+. |+.+.+. ++.||+.++..+|++||++++++|.+
T Consensus 364 l~~~ve~~~~~~~~~~~~~l~~~Gl~~~~~------------------------g~~i~~~Ppl~it~~ei~~~~~~l~~ 419 (428)
T PRK07986 364 AIGVVETTRPVNMAALQRFFVEQGVWIRPF------------------------GKLIYLMPPYIILPEQLQRLTAAVNR 419 (428)
T ss_pred eEEEEEeCCcccHHHHHHHHHHCCcEEEec------------------------CCEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 4555555432 2345555554 6666432 26899999999999999999999999
Q ss_pred HHHH
Q psy8850 369 KVKK 372 (397)
Q Consensus 369 ~~~~ 372 (397)
++++
T Consensus 420 ~l~~ 423 (428)
T PRK07986 420 AVQD 423 (428)
T ss_pred HHhh
Confidence 9853
No 328
>PRK12403 putative aminotransferase; Provisional
Probab=99.84 E-value=3.4e-18 Score=162.91 Aligned_cols=332 Identities=17% Similarity=0.143 Sum_probs=196.8
Q ss_pred CCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhh---
Q psy8850 6 TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFY--- 82 (397)
Q Consensus 6 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~--- 82 (397)
.+..+|.|.+++.+++...... + .. .+ ...+...++.+.|+++++...+.++|++||++|++.+++.....+
T Consensus 68 lGh~hp~v~~A~~~q~~~~~~~--~-~~-~~-~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AiklAr~~~~~~ 142 (460)
T PRK12403 68 LGYGRKDLAAAAARQMEQLPYY--N-MF-FH-TTHPAVIELSELLFSLLPGHYSHAIYTNSGSEANEVLIRTVRRYWQVL 142 (460)
T ss_pred CCCCCHHHHHHHHHHHHhCCCe--e-cc-cc-cCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhh
Confidence 3456899999999999873210 0 00 00 123456778888988887444579999999999999999765432
Q ss_pred ccCC-CEEEEc-CCCChhhHHHHHHHhhCC--------cEEEEeccCCC----CCC--------CHHHHHHHhc----CC
Q psy8850 83 KKRG-KHIITV-QTEHKSVLDSIRKLENDG--------FRVTYLKPKNN----GLI--------TLSQLEEKIC----SD 136 (397)
Q Consensus 83 ~~~g-~~vl~~-~~~~~s~~~~~~~~~~~g--------~~v~~v~~~~~----~~~--------d~~~l~~~i~----~~ 136 (397)
.+++ .+|+.. ...|.++..++....... ..+..+|.... +.+ +.+++++.+. ++
T Consensus 143 g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~ 222 (460)
T PRK12403 143 GKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILELGAEN 222 (460)
T ss_pred CCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHhCCCc
Confidence 1222 334433 334555555544321100 01233332210 001 1355666552 45
Q ss_pred ceEEEEecccCccccccc----HHHHHHHHHhcCcEEEEecccc-cCcc----ccccCcccccEEEecccc-ccCCC-Cc
Q psy8850 137 TILVSVMLVNNEIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKI----DINIQNYKVDLMSFSAHK-IYGPK-GI 205 (397)
Q Consensus 137 ~~~v~~~~~~~~tG~~~~----l~~i~~l~~~~gi~livD~a~~-~~~~----~~~~~~~~~d~~~~s~~K-~~g~~-g~ 205 (397)
+.+|+++.++...|.+.| ++++.++|++||+++|+|++++ +|.. ..+.....+|+++++ | +.|+. .+
T Consensus 223 iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~e~~gv~PDiv~~g--K~lggG~~Pi 300 (460)
T PRK12403 223 VAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWFAHEHFGFEPDTLSIA--KGLTSGYVPM 300 (460)
T ss_pred eEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhhhhhcCCCCCeEEEc--ccccccccce
Confidence 789999999998998887 8999999999999999999986 3222 112223468999866 9 65542 57
Q ss_pred eEEEEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhcCcEEEeC
Q psy8850 206 GALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRIL-FLQKRLYNGLMESIEEIYING 284 (397)
Q Consensus 206 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~-~~~~~l~~~l~~~~~~~~~~~ 284 (397)
|.++++++..+.+... +.......+.+ .+...+++..++|+.+.+ +.+.++.. ++.++|++.|++......++.
T Consensus 301 ga~v~~~~i~~~~~~~--~~~~~~~~T~~-gnPl~~Aaala~L~~i~~--~~l~~~~~~~~g~~l~~~L~~l~~~~~~i~ 375 (460)
T PRK12403 301 GGLVLSKRIAEALVEQ--GGVFAHGLTYS-GHPVAAAVAIANLKALRD--EGVVTRVKDDTGPYLQRCLREVFGDHPLVG 375 (460)
T ss_pred EEEEECHHHHHHHhcC--CCccccCCCCC-CCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 8888886554433211 11011112222 345566666688888765 23566664 667777776654111221221
Q ss_pred CCCCCCCceEEEEecCCC--------hHHHHHHh------CCcEecccCccCCCCCChhhHHHhhCCCccccCceEEEee
Q psy8850 285 DMNNRIPHNLNISFNFIE--------GESLLMAI------KDIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTI 350 (397)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~--------~~~~~~~l------~~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~ 350 (397)
.- ...+.++.+.|.... ...+...+ +|+.+.+. ++.+|+++
T Consensus 376 ~v-rG~Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~------------------------~~~~~l~P 430 (460)
T PRK12403 376 EV-QGAGLVAALQFAEDKATRKRFANENDLAWRCRTIGFEEGVIIRST------------------------LGRMIMAP 430 (460)
T ss_pred eE-eecceEEEEEEccCccccccccchhHHHHHHHHHHHhCCEEEEec------------------------CCEEEEEC
Confidence 11 111445555553210 01121111 16555421 15689999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHH
Q psy8850 351 GRFTTEKEIDFTIKLLKMKVKKLR 374 (397)
Q Consensus 351 ~~~~~~~~i~~~~~~l~~~~~~~~ 374 (397)
+..+|++|+|+++++|.+++.++.
T Consensus 431 pl~it~~eid~~~~~l~~al~~~~ 454 (460)
T PRK12403 431 ALVAGRAEIDELVDKTRIAVDRTA 454 (460)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998884
No 329
>PRK05965 hypothetical protein; Provisional
Probab=99.84 E-value=4e-18 Score=162.42 Aligned_cols=332 Identities=13% Similarity=0.116 Sum_probs=204.7
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhc---
Q psy8850 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYK--- 83 (397)
Q Consensus 7 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~--- 83 (397)
+..+|+|.+++.+++..... ... .+ + ...+...++.+.|++++..+.+.++|++||++|++.+++.....+.
T Consensus 61 Gh~~p~i~~Ai~~q~~~~~~-~~~-~~--~-~~~~~~~~lae~L~~~~p~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g 135 (459)
T PRK05965 61 GYGQESIVEAAAEQMRELPY-ATG-YF--H-FGSEPAIRLAAKLAERAPGSLNHVYFTLGGSDAVDSAVRFIRHYWNATG 135 (459)
T ss_pred CCCCHHHHHHHHHHHHhcCC-ccc-cc--c-cCCHHHHHHHHHHHhhCCCCcCEEEEeCChhHHHHHHHHHHHHHHHhcC
Confidence 45689999999999976221 000 00 1 1123456788888888754445799999999999999996543321
Q ss_pred -cCCCEEEEcCCCChhhHH-HHHHHhh------CC---cEEEEeccCC--CC--CCC--------HHHHHHHhc----CC
Q psy8850 84 -KRGKHIITVQTEHKSVLD-SIRKLEN------DG---FRVTYLKPKN--NG--LIT--------LSQLEEKIC----SD 136 (397)
Q Consensus 84 -~~g~~vl~~~~~~~s~~~-~~~~~~~------~g---~~v~~v~~~~--~~--~~d--------~~~l~~~i~----~~ 136 (397)
..+.+|+....+|++... +...... .+ ..+..++... .. .-| ++++++.+. ++
T Consensus 136 ~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~ 215 (459)
T PRK05965 136 RPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAELGADN 215 (459)
T ss_pred CCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCc
Confidence 124567777766666543 2222110 01 1122333221 00 012 256777774 46
Q ss_pred ceEEEEecccCccccccc----HHHHHHHHHhcCcEEEEecccc-cCcc----ccccCcccccEEEecccc-ccCC-CCc
Q psy8850 137 TILVSVMLVNNEIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKI----DINIQNYKVDLMSFSAHK-IYGP-KGI 205 (397)
Q Consensus 137 ~~~v~~~~~~~~tG~~~~----l~~i~~l~~~~gi~livD~a~~-~~~~----~~~~~~~~~d~~~~s~~K-~~g~-~g~ 205 (397)
+.+|+++.++...|.+.| ++++.++|++||+++|+|+++. +|.. ..+.....+|+++++ | +.|+ ..+
T Consensus 216 iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~g--Kgl~gG~~Pi 293 (459)
T PRK05965 216 VAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLFACEAEGVVPDLMTVA--KGLTSGYVPM 293 (459)
T ss_pred eEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchhhhHhhcCCCCCeEEec--hhhccCCcce
Confidence 789999999988898766 7899999999999999999987 3322 112223468999998 9 6655 368
Q ss_pred eEEEEecCCCCccccccc-cCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeC
Q psy8850 206 GALYIRRNPRTRIEAQIH-GGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYING 284 (397)
Q Consensus 206 g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 284 (397)
|.++++++....+..... .+......+.+. +...+++..++|+.+.+ +++.++..++.++|.+.|++ +....++.
T Consensus 294 ~av~~~~~i~~~~~~~~~~~~~~~h~~T~~g-npl~~Aaa~a~L~~l~~--~~l~~~~~~~g~~l~~~l~~-l~~~~~v~ 369 (459)
T PRK05965 294 GAVLMSDHVYQGIADGAGAAAPVGHGYTYSA-HPVSAAVGLEVLRLYHE--GGLLANGQKAGPRFAAGLDA-LRAHPLVG 369 (459)
T ss_pred eEEEEcHHHHHHHhccccccccccccCCCCC-CHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHh-hccCCCEE
Confidence 999998776544432100 000111223333 34455555578888765 45777888888888888877 43222222
Q ss_pred CCCCCCCceEEEEecCCC------------hHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEee
Q psy8850 285 DMNNRIPHNLNISFNFIE------------GESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTI 350 (397)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~------------~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~ 350 (397)
+ -...+.++-+.+.... ...+...+. |+.+.+. +.+.||+.+
T Consensus 370 ~-vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gll~~~~-----------------------g~~~i~~~P 425 (459)
T PRK05965 370 D-VRGRGLLGALELVADKATKTPFDAALDPADRIFDRAYANGLVFRAF-----------------------GDGVLGFAP 425 (459)
T ss_pred E-EeecceEEEEEEeccccccCCCCchhHHHHHHHHHHHhCCeEEEec-----------------------CCcEEEEEC
Confidence 1 1122444555553210 122333333 6666421 126799999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHH
Q psy8850 351 GRFTTEKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 351 ~~~~~~~~i~~~~~~l~~~~~~~ 373 (397)
+..++++||++++++|.+++.++
T Consensus 426 pL~it~~ei~~~~~~l~~~l~~~ 448 (459)
T PRK05965 426 ALCCTEGEFDLIFERTRKTLDDV 448 (459)
T ss_pred CCcCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999876
No 330
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.84 E-value=5.6e-18 Score=159.08 Aligned_cols=321 Identities=15% Similarity=0.167 Sum_probs=195.0
Q ss_pred CCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhh--c
Q psy8850 6 TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFY--K 83 (397)
Q Consensus 6 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~--~ 83 (397)
.+..+|.+.+++.+++..... ... . ...+...++.+.|+++.+.. +.++|++||++|++.+++....++ +
T Consensus 54 lGh~~p~v~~ai~~q~~~~~~-~~~-~-----~~~~~~~~la~~L~~~~~~~-~~v~f~~sGseA~e~AlklAr~~~~~~ 125 (408)
T PRK04612 54 LGHNDPDLVAALTEQAGKLWH-TSN-V-----FYSAPPLKLAEELVTASRFA-EKVFLCNSGTEANEAAIKLVRKWASSQ 125 (408)
T ss_pred CCCCCHHHHHHHHHHHHhccc-ccc-c-----cCCHHHHHHHHHHHhhCCCC-CEEEEcCchHHHHHHHHHHHHHHHHhh
Confidence 346789999999999876321 110 0 11233456777777776432 579999999999999999655432 1
Q ss_pred c---CCCEEEEcCCCChhhHHHHHHHhh-C----Cc-----EEEEeccCCCCCCCHHHHHHHhcC-CceEEEEecccCcc
Q psy8850 84 K---RGKHIITVQTEHKSVLDSIRKLEN-D----GF-----RVTYLKPKNNGLITLSQLEEKICS-DTILVSVMLVNNEI 149 (397)
Q Consensus 84 ~---~g~~vl~~~~~~~s~~~~~~~~~~-~----g~-----~v~~v~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~~~t 149 (397)
+ .+.+|+....+|++.......... . +. .+..+|. .|++.+++.+.+ ++.+|+++..+...
T Consensus 126 g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~~~~~~~aavi~eP~~~~g 200 (408)
T PRK04612 126 GRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDF-----NDVEALEAAMAGGDVAAVMLEPIQGEG 200 (408)
T ss_pred CCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCC-----CCHHHHHHhhCCCCEEEEEECCccCCC
Confidence 1 134677777766665443322211 0 11 1122222 278899988864 56666776555444
Q ss_pred ccccc----HHHHHHHHHhcCcEEEEecccc-cCccc--ccc--CcccccEEEecccc-ccCCCCceEEEEecCCCCccc
Q psy8850 150 GVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKID--INI--QNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIE 219 (397)
Q Consensus 150 G~~~~----l~~i~~l~~~~gi~livD~a~~-~~~~~--~~~--~~~~~d~~~~s~~K-~~g~~g~g~~~~~~~~~~~~~ 219 (397)
|.+.+ +++|.++|++||+++|+|++++ +|... +.. ....+|++++ +| +.++..+|+++++++..+.+.
T Consensus 201 g~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pdi~t~--~K~l~~G~piga~~~~~~~~~~~~ 278 (408)
T PRK04612 201 GVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLFAHWQEQVTPDIVTL--AKALGGGFPIGAMLAGPKVAETMQ 278 (408)
T ss_pred CCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCchhhhhhcCCCCCEEEE--cchhcCCCceEEEEECHHHHhhhc
Confidence 44443 7899999999999999999987 22211 111 1123555555 59 544334788888765444433
Q ss_pred cccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-cEEEeCCCCCCCCceEEEEe
Q psy8850 220 AQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIE-EIYINGDMNNRIPHNLNISF 298 (397)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~ 298 (397)
.... ....+ .+.....+..++++.+.+ +++.+++.++.+++.+.|++ +. .+.+..... ..+.++-+.+
T Consensus 279 ~~~~------~~t~~-~~p~~~aaa~a~L~~~~~--~~l~~~~~~~g~~l~~~l~~-l~~~~~~i~~vr-g~Gl~~~i~~ 347 (408)
T PRK04612 279 FGAH------GTTFG-GNPLAAAVARVALRKLAS--PQIAANVARQSAALRAGLEA-LNAEFGVFAQVR-GRGLMLGAVL 347 (408)
T ss_pred CCCc------CCCCC-CCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHH-HHhhCCCeeeee-ccceEEEEEe
Confidence 2211 12223 345555666678887765 46778888888888888876 32 122221111 1144555565
Q ss_pred cCC---ChHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHH
Q psy8850 299 NFI---EGESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 299 ~~~---~~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 373 (397)
... ....+...+. |+.+.+. +.+.||+.++..++++||++++++|.+++.++
T Consensus 348 ~~~~~~~a~~i~~~l~~~Gvlv~~~-----------------------g~~~lRl~Ppl~it~eeid~~l~~l~~~l~~~ 404 (408)
T PRK04612 348 APAHAGQAGAILDLAAEHGLLLLQA-----------------------GPDVLRFVPALNLTDAELADGLARLRLALADY 404 (408)
T ss_pred cCchhhHHHHHHHHHHHCCeEEeeC-----------------------CCCEEEEcCCccCCHHHHHHHHHHHHHHHHHH
Confidence 421 1344555554 6666432 12789999999999999999999999999775
Q ss_pred Hh
Q psy8850 374 RE 375 (397)
Q Consensus 374 ~~ 375 (397)
.+
T Consensus 405 ~~ 406 (408)
T PRK04612 405 VA 406 (408)
T ss_pred hh
Confidence 43
No 331
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.84 E-value=8.2e-18 Score=154.99 Aligned_cols=303 Identities=14% Similarity=0.126 Sum_probs=193.9
Q ss_pred CCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccC
Q psy8850 6 TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKR 85 (397)
Q Consensus 6 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~ 85 (397)
.+..+|.+.+++.+++....- ... . ...+...++.+.++++.+. +.+++++|||+|++++++.... + ..
T Consensus 38 lGh~~p~v~~ai~~ql~~~~~-~~~-~-----~~~~~~~~la~~l~~~~~~--~~v~~~~SGseA~e~Alklar~-~-~g 106 (364)
T PRK04013 38 LGHNHPEWVEEMSEQLEKLVV-AGP-M-----FEHEEKEEMLEELSKWVNY--EYVYMGNSGTEAVEAALKFARL-Y-TG 106 (364)
T ss_pred CCCCCHHHHHHHHHHHHhcCC-ccC-C-----cCCHHHHHHHHHHHhhcCC--CEEEEeCchHHHHHHHHHHHHH-H-hC
Confidence 446789999999999986321 111 1 1134567788888888764 4899999999999999997654 3 23
Q ss_pred CCEEEEcCCCChhhHHHHHHHh-h----CCc-----EEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCccccccc-
Q psy8850 86 GKHIITVQTEHKSVLDSIRKLE-N----DGF-----RVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP- 154 (397)
Q Consensus 86 g~~vl~~~~~~~s~~~~~~~~~-~----~g~-----~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~- 154 (397)
+++|+....+|++.....-.+. . .+. .+..+|.+ |++.+++.+.+++++|++++.+...|...+
T Consensus 107 r~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~~-----d~~~l~~~i~~~~aAvivEpi~g~gG~~~~~ 181 (364)
T PRK04013 107 RKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPFN-----DVEAAKEAITKETAAVIFEPIQGEGGIVPAK 181 (364)
T ss_pred CCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecCC-----CHHHHHHHhcCCcEEEEEcCCcCCCCCcCCC
Confidence 4778877777776654433211 0 011 12223322 788999999889999999999988887654
Q ss_pred ---HHHHHHHHHhcCcEEEEeccccc---Ccc-ccccCcccccEEEecccc-ccCCCCceEEEEecCCCCccccccccCC
Q psy8850 155 ---ILEIGELCRSKGVIFHCDAAQAV---GKI-DINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEAQIHGGG 226 (397)
Q Consensus 155 ---l~~i~~l~~~~gi~livD~a~~~---~~~-~~~~~~~~~d~~~~s~~K-~~g~~g~g~~~~~~~~~~~~~~~~~~~~ 226 (397)
++++.++|++||+++|+|++++. |.. ..+.....+|+++++ | +.|+..+|.++.+.+.. +..
T Consensus 182 ~~yl~~lr~lc~~~gillI~DEv~tG~RtG~~~a~~~~gv~PDiv~~g--K~lggG~P~~a~~~~~~~~----~~~---- 251 (364)
T PRK04013 182 EEFVKTLRDLTEDVGALLIADEVQSGLRTGKFLAIEHYKVEPDIVTMG--KGIGNGVPVSLTLTNFDVE----RGK---- 251 (364)
T ss_pred HHHHHHHHHHHHHcCCEEEEechhhcCCCCchhHHHhcCCCCCEEEec--ccccCCceeEEEEeccccc----CCC----
Confidence 89999999999999999999872 211 112223468999987 9 65545578888875531 111
Q ss_pred ccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCChHHH
Q psy8850 227 HEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESL 306 (397)
Q Consensus 227 ~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (397)
...+.+ .|...+++..++++.+.+ +++.++.++. + +.+.. +. +.+ -...+.++-+.+.. +...+
T Consensus 252 --~~~T~~-gnp~~~aaa~a~l~~i~~--~~l~~~~~~~---l-~~l~~--~~---v~~-vRG~Gl~~gve~~~-~~~~i 315 (364)
T PRK04013 252 --HGSTFG-GNPLACKAVAVTLRILRR--ERLVEKAGEK---F-IEIKG--ER---VVT-TRGRGLMIGIVLKK-PVGKY 315 (364)
T ss_pred --cCCCCC-cCHHHHHHHHHHHHHHHh--ccHHHHHHHH---H-HHhcc--Cc---cee-eeeCcEEEEEEeCC-cHHHH
Confidence 112233 344555555578888765 2333333332 2 22222 21 111 11124455556643 23455
Q ss_pred HHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHH
Q psy8850 307 LMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 307 ~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 373 (397)
...+. |+.+.+. +.+.+||.++..++++++++++++|.+++.++
T Consensus 316 ~~~~~~~Gll~~~~-----------------------g~~vlr~~Ppl~it~~~i~~~~~~l~~~l~~~ 361 (364)
T PRK04013 316 VEELQNRGYLVHTA-----------------------GQRVIRLLPPLIISKDTMEEAKSAIEGVINDI 361 (364)
T ss_pred HHHHHhCCcEEeeC-----------------------CCCEEEEeCCcccCHHHHHHHHHHHHHHHHHH
Confidence 55544 6666432 12789999999999999999999999998754
No 332
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.84 E-value=3.6e-18 Score=162.59 Aligned_cols=331 Identities=9% Similarity=0.068 Sum_probs=198.0
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCC-----CCCcEEEeCChhHHHHHHHHHhHhh
Q psy8850 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYA-----DPREIIWTSGATESNNLAIKGAAHF 81 (397)
Q Consensus 7 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-----~~~~i~~~~g~t~a~~~~l~~l~~~ 81 (397)
+..+|.+.+++++++..... ... ... ..+...++.+.|++++.. ..+.++|++||++|++.+++....+
T Consensus 79 Gh~~p~i~~Ai~~q~~~l~~-~~~----~~~-~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~sGSEAvE~AlKlAr~~ 152 (472)
T PRK08742 79 GHAEPRIGAAIAAQAGELEQ-VML----AGF-THEPAVQLAEQLLAIAPRQDGRAPLSKVFYADNGSAGVEVALKMAFHY 152 (472)
T ss_pred CCCCHHHHHHHHHHHHhCCC-ccc----ccc-CCHHHHHHHHHHHHhCCCcccCCCCCEEEEeCCchHHHHHHHHHHHHH
Confidence 46789999999999875221 110 011 123456777888887743 2347999999999999999966543
Q ss_pred hc----cCCCEEEEcCCCChhhHHHHHHHhhC-C---------cEEEEeccCCCCC------------CCHHHHHHHhc-
Q psy8850 82 YK----KRGKHIITVQTEHKSVLDSIRKLEND-G---------FRVTYLKPKNNGL------------ITLSQLEEKIC- 134 (397)
Q Consensus 82 ~~----~~g~~vl~~~~~~~s~~~~~~~~~~~-g---------~~v~~v~~~~~~~------------~d~~~l~~~i~- 134 (397)
+. ..+.+|+....+|++........... . ..+..+|...... -+++.+++.+.
T Consensus 153 ~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 232 (472)
T PRK08742 153 FHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYALQAADALQALFEQ 232 (472)
T ss_pred HHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccccccCCCHHHHHHHHHHHHHHHHHh
Confidence 21 12356776666666654333222110 0 1123344321110 12566777764
Q ss_pred --CCceEEEEec-ccCccccccc----HHHHHHHHHhcCcEEEEecccc-cCccc----cccCcccccEEEecccc-ccC
Q psy8850 135 --SDTILVSVML-VNNEIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKID----INIQNYKVDLMSFSAHK-IYG 201 (397)
Q Consensus 135 --~~~~~v~~~~-~~~~tG~~~~----l~~i~~l~~~~gi~livD~a~~-~~~~~----~~~~~~~~d~~~~s~~K-~~g 201 (397)
+++.+|+++. +++..|.+.| ++.+.++|++||+++|+|+++. +|..- .+.....+|+++++ | +.|
T Consensus 233 ~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~a~e~~gv~PDiv~~g--Kgl~g 310 (472)
T PRK08742 233 SPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTLFACEQAGVMPDLLCLS--KGLTG 310 (472)
T ss_pred CCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchHHHhcCCCCCEEEEc--ccccC
Confidence 4688999998 5778887665 7899999999999999999986 33321 22233468999998 9 655
Q ss_pred C-CCceEEEEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcE
Q psy8850 202 P-KGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEI 280 (397)
Q Consensus 202 ~-~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 280 (397)
+ ..+|.++++++..+.+......+......+.+. +...+++..++++.+.+ +++.++..++.++|++.++. +...
T Consensus 311 G~~Plaav~~~~ei~~~~~~~~~~~~~~h~~T~~g-npl~~Aaa~a~L~~i~~--~~l~~~~~~~g~~l~~~~~~-~~~~ 386 (472)
T PRK08742 311 GFLPLSAVLATQQLYDAFLDDSRERAFLHSHSYTG-NPLACAAALATLDIFAD--DDVIARNQPTAARMTQLAAQ-IGEH 386 (472)
T ss_pred CCCCcceeeccHHHHHHhhccCccCccCcCCCCCc-cHHHHHHHHHHHHHHHH--CCHHHHHHHHHHHHHHHHHH-HhcC
Confidence 4 258999988766444321100010111122222 44556666688888765 34555666666666655544 3222
Q ss_pred EEeCCCCCCCCceEEEEecCC-C-------h----HHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceE
Q psy8850 281 YINGDMNNRIPHNLNISFNFI-E-------G----ESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSI 346 (397)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~-~-------~----~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~i 346 (397)
.++.+ -...+.++-+.|... . . ..+...+. |+.+.+. ++.|
T Consensus 387 ~~i~d-vRG~Gl~~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~------------------------g~vi 441 (472)
T PRK08742 387 PHVAD-VRQAGMVVAFELTRGGNKRTPFPPAARVGLHAYRAALARGVVLRPL------------------------GDVL 441 (472)
T ss_pred CCeee-EeccceEEEEEeccCccccccCCchhHHHHHHHHHHHHCCeEEEec------------------------CCEE
Confidence 22211 111244555665321 1 0 12333332 6665431 2789
Q ss_pred EEeeCCCCCHHHHHHHHHHHHHHHHHHH
Q psy8850 347 RFTIGRFTTEKEIDFTIKLLKMKVKKLR 374 (397)
Q Consensus 347 Ri~~~~~~~~~~i~~~~~~l~~~~~~~~ 374 (397)
||.++..++++|||+++++|.++++++-
T Consensus 442 ~~~PpL~it~~ei~~~~~~l~~~l~~~~ 469 (472)
T PRK08742 442 YWMPPYCVDEAQLALLADTTRHAIDEAV 469 (472)
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999997753
No 333
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.84 E-value=4.2e-18 Score=162.20 Aligned_cols=330 Identities=11% Similarity=0.103 Sum_probs=203.8
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhh---c
Q psy8850 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFY---K 83 (397)
Q Consensus 7 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~---~ 83 (397)
+..+|.|.+++++++..... . ...+ ...+...++.+.|++++....+.++|++||++|++.+++....++ .
T Consensus 62 Gh~~p~v~~Ai~~ql~~l~~-~----~~~~-~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlKlAr~~~~~~g 135 (466)
T PRK07030 62 GHANPRINQRIKDQVDQLEH-V----ILAG-FSHEPVIELSERLVKITPPGLSRCFYADNGSSAIEVALKMSFHYWRNRG 135 (466)
T ss_pred CCCCHHHHHHHHHHHHhcCC-c----cccc-cCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHHhC
Confidence 56789999999999976211 0 0001 113456678888888775444579999999999999999664331 1
Q ss_pred -cCCCEEEEcCCCChhhHHHHHHHhhC-----C-----cEEEEeccCCCCC------------CCHHHHHHHhc---CCc
Q psy8850 84 -KRGKHIITVQTEHKSVLDSIRKLEND-----G-----FRVTYLKPKNNGL------------ITLSQLEEKIC---SDT 137 (397)
Q Consensus 84 -~~g~~vl~~~~~~~s~~~~~~~~~~~-----g-----~~v~~v~~~~~~~------------~d~~~l~~~i~---~~~ 137 (397)
..+.+|+....+|++.......+... + ..+..+|...... -+++++++.+. +++
T Consensus 136 ~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~le~~~~~~~~~i 215 (466)
T PRK07030 136 KPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAHMEQTLAEHHDEI 215 (466)
T ss_pred CCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCce
Confidence 12356766666666654333222110 0 1123333322110 12466777774 467
Q ss_pred eEEEEec-ccCccccccc----HHHHHHHHHhcCcEEEEecccc-cCcc----ccccCcccccEEEecccc-ccCC-CCc
Q psy8850 138 ILVSVML-VNNEIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKI----DINIQNYKVDLMSFSAHK-IYGP-KGI 205 (397)
Q Consensus 138 ~~v~~~~-~~~~tG~~~~----l~~i~~l~~~~gi~livD~a~~-~~~~----~~~~~~~~~d~~~~s~~K-~~g~-~g~ 205 (397)
.+|+++. ++...|.+.| ++++.++|++||+++|+|+++. +|.. ..+.....+|+++++ | +.|+ ..+
T Consensus 216 AAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~a~~~~gv~PDiv~~g--Kgl~gG~~Pi 293 (466)
T PRK07030 216 AAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMFACEQAGIRPDFLCLS--KALTGGYLPL 293 (466)
T ss_pred EEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccchHHHhcCCCCCEEeee--hhccCCcccc
Confidence 8999998 5888888766 7899999999999999999976 3322 112234468999997 9 6554 358
Q ss_pred eEEEEecCCCCccccccc-cCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeC
Q psy8850 206 GALYIRRNPRTRIEAQIH-GGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYING 284 (397)
Q Consensus 206 g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 284 (397)
|.++++++..+.+..... .+......+.+ .|...+++..++|+.+.+ .++.++..++.++|++.|++ +.....+.
T Consensus 294 ~av~~~~ei~~~~~~~~~~~~~~~h~~T~~-gnpla~aaa~a~L~~i~~--~~l~~~~~~~G~~l~~~L~~-l~~~~~v~ 369 (466)
T PRK07030 294 AAVLTTDTVYQAFYDDYPTLRAFLHSHSYT-GNPLACAAALATLDIFEQ--DNVIENNRALARRMAEATAH-LADHPHVA 369 (466)
T ss_pred eEEEecHHHHHHHhcccccccccccCCCCC-CCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHH-HhcCCCEE
Confidence 999998776544321100 00001112222 344556666678888866 45677888888888888877 42221111
Q ss_pred CCCCCCCceEEEEecCCC------------hHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEee
Q psy8850 285 DMNNRIPHNLNISFNFIE------------GESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTI 350 (397)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~------------~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~ 350 (397)
. -...+.++.+.+.... ...+...+. |+.+.+. ++.+|+.+
T Consensus 370 ~-vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~------------------------g~~i~~~P 424 (466)
T PRK07030 370 E-VRQTGMILAIEMVQDKASKTPYPWQERRGLKVYQHALERGALLRPL------------------------GSVVYFLP 424 (466)
T ss_pred E-eEeceeEEEEEeccCccccccCcchhHHHHHHHHHHHHCCeEEEec------------------------CCEEEEEC
Confidence 1 1112445555553211 013333332 6665431 26799999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHH
Q psy8850 351 GRFTTEKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 351 ~~~~~~~~i~~~~~~l~~~~~~~ 373 (397)
+..++++||++++++|.++++++
T Consensus 425 pl~it~~eid~~~~~l~~al~~~ 447 (466)
T PRK07030 425 PYVITPEQIDFLAEVASEGIDIA 447 (466)
T ss_pred CccCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999987
No 334
>PRK07036 hypothetical protein; Provisional
Probab=99.83 E-value=4.8e-18 Score=161.98 Aligned_cols=338 Identities=14% Similarity=0.156 Sum_probs=204.6
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhc---
Q psy8850 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYK--- 83 (397)
Q Consensus 7 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~--- 83 (397)
+..+|+|.+++.+++....-.. .+ .....+...++.+.|+++.....+.++|++||++|++.+++.......
T Consensus 66 Gh~~p~v~~Ai~~q~~~~~~~~---~~--~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g 140 (466)
T PRK07036 66 GYGREEMADAIADQARRLPYYT---PF--GDMTNAPAAELAAKLAELAPGDLNHVFLTTGGSTAVDSALRFVHYYFNVRG 140 (466)
T ss_pred CCCCHHHHHHHHHHHHhCcccc---cc--cccCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHHHHhcC
Confidence 4668999999999987621000 01 001134456778888887654445799999999999999996543211
Q ss_pred -cCCCEEEEcCCCChhhHHHHHHHh-hCC---------cEEEEeccCCC----CCC--------CHHHHHHHhc----CC
Q psy8850 84 -KRGKHIITVQTEHKSVLDSIRKLE-NDG---------FRVTYLKPKNN----GLI--------TLSQLEEKIC----SD 136 (397)
Q Consensus 84 -~~g~~vl~~~~~~~s~~~~~~~~~-~~g---------~~v~~v~~~~~----~~~--------d~~~l~~~i~----~~ 136 (397)
..+.+|+....+|++.......+. ..+ ..+..+|.... ... .++.+++.+. ++
T Consensus 141 ~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 220 (466)
T PRK07036 141 RPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILSLGADN 220 (466)
T ss_pred CCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHHHcCCCc
Confidence 123677777766666543322221 100 11333333211 001 1244555553 46
Q ss_pred ceEEEEecccCccccccc----HHHHHHHHHhcCcEEEEecccc-cCccc--c--c-cCcccccEEEecccc-ccCC-CC
Q psy8850 137 TILVSVMLVNNEIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKID--I--N-IQNYKVDLMSFSAHK-IYGP-KG 204 (397)
Q Consensus 137 ~~~v~~~~~~~~tG~~~~----l~~i~~l~~~~gi~livD~a~~-~~~~~--~--~-~~~~~~d~~~~s~~K-~~g~-~g 204 (397)
+.+|+++.++...|.+.| ++.+.++|++||+++|+|++++ +|..- + . .....+|+++++ | +.|+ ..
T Consensus 221 iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~~gv~PDivt~g--K~l~gG~~P 298 (466)
T PRK07036 221 IAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFFASEAVFGIQPDIITFA--KGLTSGYQP 298 (466)
T ss_pred eEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchhhhhhhhcCCCCCEEEEc--cccccCccc
Confidence 889999999988898877 8999999999999999999985 43321 1 1 223468999887 9 6554 25
Q ss_pred ceEEEEecCCCCccccc-cccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEe
Q psy8850 205 IGALYIRRNPRTRIEAQ-IHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYIN 283 (397)
Q Consensus 205 ~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 283 (397)
+|.++++++..+.+... ..+.......+.+. +...+++..++|+.+.+ .++.++..++.++|++.|++ +....++
T Consensus 299 i~av~~~~~i~~~~~~~~~~~~~~~~~~T~~g-npl~~aaa~a~Le~i~~--~~l~~~~~~~g~~l~~~L~~-l~~~~~v 374 (466)
T PRK07036 299 LGAVIISERLLDVISGPNAKGNVFTHGFTYSG-HPVACAAALKNIEIMER--EGLCEHVREVGPYFEERLAS-LRELPLV 374 (466)
T ss_pred cEEEEEcHHHHHHHhcccCcCcccccCCCCCC-CHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHH-hccCCCE
Confidence 89999987765544321 00100111122333 44556666688887765 45777888888888888866 4322211
Q ss_pred CCCCCCCCceEEEEecCCC------------hHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEe
Q psy8850 284 GDMNNRIPHNLNISFNFIE------------GESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFT 349 (397)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~------------~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~ 349 (397)
.. -...+.++.+.|.... ...+...+. |+.+.+. ++.+|++
T Consensus 375 ~~-vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~------------------------~~~~~l~ 429 (466)
T PRK07036 375 GD-VRGDHLMACVECVADKGSKALLPEDIAIGQRIDRHCQERGLLVRPL------------------------EHLCVLS 429 (466)
T ss_pred EE-EEeeceEEEEEEccCccccCCCCchhHHHHHHHHHHHHCCcEEeec------------------------CCEEEEe
Confidence 11 0112455566663211 112333332 5555431 2678999
Q ss_pred eCCCCCHHHHHHHHHHHHHHHHHHHhcCccc
Q psy8850 350 IGRFTTEKEIDFTIKLLKMKVKKLRELSPLW 380 (397)
Q Consensus 350 ~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~ 380 (397)
++..+|++|||+++++|.++++++.+...+.
T Consensus 430 Ppl~it~~~id~~~~~l~~al~~~~~~~~~~ 460 (466)
T PRK07036 430 PPLIITRAQIDEIVAILRAAIEETADELAAH 460 (466)
T ss_pred CCCcCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999998886544443
No 335
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.83 E-value=2.4e-18 Score=158.40 Aligned_cols=306 Identities=18% Similarity=0.159 Sum_probs=200.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHH-HHHHhhCCcEEEEecc
Q psy8850 40 EKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDS-IRKLENDGFRVTYLKP 118 (397)
Q Consensus 40 ~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~-~~~~~~~g~~v~~v~~ 118 (397)
.+...++++.+++++|.+ .+++++|||.|++++....+ ++||+| +.+.|.....+ +... |...+.++.
T Consensus 70 ~~s~~~lE~~va~~~G~~--~av~v~sGT~Al~ll~~l~l----~pGDeV--psn~~f~Tt~ahIe~~---Gav~vDi~~ 138 (450)
T TIGR02618 70 SRNFYHLERTVRELYGFK--YVVPTHQGRGAENLLSQIAI----KPGDYV--PGNMYFTTTRYHQEKN---GATFVDIII 138 (450)
T ss_pred CCcHHHHHHHHHHHHCCC--eEEEcCCHHHHHHHHHHhCC----CCcCEE--CCceeHHHHHHHHHhC---CeEEEeeec
Confidence 345788999999999988 79999999999887655554 789977 55666555554 5444 766655543
Q ss_pred C----------CCCCCCHHHHHHHhcC----CceEEEEecccCcc-ccccc---HHHHHHHHHhcCcEEEEecccccCcc
Q psy8850 119 K----------NNGLITLSQLEEKICS----DTILVSVMLVNNEI-GVIQP---ILEIGELCRSKGVIFHCDAAQAVGKI 180 (397)
Q Consensus 119 ~----------~~~~~d~~~l~~~i~~----~~~~v~~~~~~~~t-G~~~~---l~~i~~l~~~~gi~livD~a~~~~~~ 180 (397)
+ .+|.+|+++++++|++ ++++|+++.++|.. |...| ++++.++|++||++||.|+++.++..
T Consensus 139 dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~~gNA 218 (450)
T TIGR02618 139 DEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRCVENA 218 (450)
T ss_pred ccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccchhhCh
Confidence 2 3688999999999986 34577888787765 78755 68999999999999999999987542
Q ss_pred cc-----------cc----C--cccccEEEecccc-ccCCCCceEEEEecC-CCCccccc--cccCCccccccCCCCchh
Q psy8850 181 DI-----------NI----Q--NYKVDLMSFSAHK-IYGPKGIGALYIRRN-PRTRIEAQ--IHGGGHEYGLRSGTLATH 239 (397)
Q Consensus 181 ~~-----------~~----~--~~~~d~~~~s~~K-~~g~~g~g~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~ 239 (397)
.+ ++ . .-.+|.+++|++| .+++.| |++..+++ +.++++.. ..+|. ...|.....
T Consensus 219 ~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~~G-G~l~~~d~~l~~k~r~~~~~~eG~----~tyGgla~r 293 (450)
T TIGR02618 219 YFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVNIG-GFLCMNDDEMFQSAKELVVVFEGM----PSYGGLAGR 293 (450)
T ss_pred hhhhcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCCCc-eEEEeCCHHHHHHHHHHhhhcCCc----cccCchhhh
Confidence 21 11 0 1158999999999 777876 77775544 44444333 22221 223444445
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEec----CCC-----hHHHHHHh
Q psy8850 240 QIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN----FIE-----GESLLMAI 310 (397)
Q Consensus 240 ~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-----~~~~~~~l 310 (397)
.+.++..+++...+ ..+.++.....++|.+.|.+ .|+.+..+.+ ++.+.+... .++ ...+...|
T Consensus 294 ~~~ala~gL~e~~~--~~y~~~r~~~a~~La~~L~~--~Gvpv~~p~g---gh~V~vda~~~lph~~~~~~p~~al~~~l 366 (450)
T TIGR02618 294 DMEAMAIGIREAVD--YEYIEHRVKQVRYLGDKLKA--AGVPIVEPVG---GHAVFLDARRFLPHIPQDQFPAQSLAASI 366 (450)
T ss_pred hHHHHHHHHHHhhh--HHHHHHHHHHHHHHHHHHHH--CCCcccCCCC---cceEEEEhHHhCCCCChhhChHHHHHHHH
Confidence 66666667776544 24555666678899999998 4887765544 455555432 232 34444444
Q ss_pred C---CcE-ecccCccCCCCCChhhHHHhhCCCcccc--CceEEEeeC-CCCCHHHHHHHHHHHHHHHHHHHhcC
Q psy8850 311 K---DIA-VSSGSACTSASLEPSYVLRALGCNDELA--HSSIRFTIG-RFTTEKEIDFTIKLLKMKVKKLRELS 377 (397)
Q Consensus 311 ~---~i~-~~~g~~~~~~~~~~~~~~~~~g~~~~~~--~~~iRi~~~-~~~~~~~i~~~~~~l~~~~~~~~~~~ 377 (397)
- ||. +.-|+.......+. ..... -..+|+.++ -.-|.+.+|..+++|..+.++-..+.
T Consensus 367 y~~~gir~~e~g~~~~~~~~~~---------~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~~~~~~ 431 (450)
T TIGR02618 367 YVETGVRSMERGIVSAGRNNVT---------GEHHRPKLELVRLTIPRRVYTYAHMDVVADGIIKLYKHRDDIR 431 (450)
T ss_pred HHHhCccEEeecceecccCCCC---------CcccCCccceeeeccccccccHhHHHHHHHHHHHHHhhHhhcC
Confidence 3 432 22232211100000 00111 267999987 33579999999999998887765554
No 336
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.83 E-value=1.1e-17 Score=159.34 Aligned_cols=325 Identities=14% Similarity=0.099 Sum_probs=197.4
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCC---CcEEEe-CChhHHHHHHHHHhHhhh
Q psy8850 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADP---REIIWT-SGATESNNLAIKGAAHFY 82 (397)
Q Consensus 7 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~---~~i~~~-~g~t~a~~~~l~~l~~~~ 82 (397)
+..+|.|.+++++++...... +.. ....+...++.+.|.+++..+. +.++|+ +||++|++.+++... .+
T Consensus 78 Gh~~p~v~~Ai~~ql~~~~~~-----~~~-~~~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~SGSEAve~AlklAr-~~ 150 (464)
T PRK06938 78 GHNHPVVIEAIQQVLADELPL-----HTL-DLTTPVKDQFVQDLFASLPEAFAREAKIQFCGPTGTDAVEAALKLVK-TA 150 (464)
T ss_pred CCCCHHHHHHHHHHHHhhhcc-----ccc-ccCCHHHHHHHHHHHHhCcccccccceEEEeCCCcHHHHHHHHHHHH-Hh
Confidence 467899999999998642210 100 1112344566677777664321 256665 799999999999644 44
Q ss_pred ccCCCEEEEcCCCChhhHHHHHHHhh-C-------C--cEEEEeccCCCCC------------CCHHHHHHHhcC-----
Q psy8850 83 KKRGKHIITVQTEHKSVLDSIRKLEN-D-------G--FRVTYLKPKNNGL------------ITLSQLEEKICS----- 135 (397)
Q Consensus 83 ~~~g~~vl~~~~~~~s~~~~~~~~~~-~-------g--~~v~~v~~~~~~~------------~d~~~l~~~i~~----- 135 (397)
++ +.+|+....+|++.......+.. . + ..+..+|.+.... .+++.+++.+.+
T Consensus 151 tg-r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~ 229 (464)
T PRK06938 151 TG-RSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLDDPESGV 229 (464)
T ss_pred hC-CCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHHHHHHHHHhhccCC
Confidence 34 45666666656555433332211 0 0 1234454432110 136778887753
Q ss_pred -CceEEEEecccCccccccc----HHHHHHHHHhcCcEEEEecccc-cCcc----ccccCcccccEEEecccc-ccCCCC
Q psy8850 136 -DTILVSVMLVNNEIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKI----DINIQNYKVDLMSFSAHK-IYGPKG 204 (397)
Q Consensus 136 -~~~~v~~~~~~~~tG~~~~----l~~i~~l~~~~gi~livD~a~~-~~~~----~~~~~~~~~d~~~~s~~K-~~g~~g 204 (397)
++.+|+++.++...|.+.| ++++.++|++||+++|.|+++. +|.. ..+.....+|+++++ | +.|+..
T Consensus 230 ~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~e~~gv~PDiv~~g--KglggG~P 307 (464)
T PRK06938 230 VLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGIIPDVVVLS--KAIGGSLP 307 (464)
T ss_pred CceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHHHHHHhcCCCCCEEEee--ccccCCCc
Confidence 5789999999988888766 7899999999999999999986 3321 112223468999998 9 665556
Q ss_pred ceEEEEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeC
Q psy8850 205 IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYING 284 (397)
Q Consensus 205 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 284 (397)
+|.++++++. ..+.+.. ...+.+. |...+++..++|+.+.+ .++.++.+++.++|.+.|++......++.
T Consensus 308 lsAv~~~~~~-~~~~~~~------~~~T~~g-npla~Aaa~a~L~~l~~--~~l~~~~~~~G~~l~~~L~~l~~~~~~i~ 377 (464)
T PRK06938 308 LAVVVYREWL-DTWQPGA------HAGTFRG-NQMAMAAGSATLRYIKE--HRLAEHAAAMGERLREHLRQLQRDYPQLG 377 (464)
T ss_pred eEEEeehhHh-hccCCCC------CCCCCCc-CHHHHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHhCCCee
Confidence 8999988653 3332211 1122333 34455555578887765 45667777778888887776212222221
Q ss_pred CCCCCCCceEEEEecCCC---------------hHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEE
Q psy8850 285 DMNNRIPHNLNISFNFIE---------------GESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIR 347 (397)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~---------------~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iR 347 (397)
.- ...+.++.+.|.... ...+...+. |+.+.++. ..++.||
T Consensus 378 ~V-rG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~g---------------------~~~~~l~ 435 (464)
T PRK06938 378 DV-RGRGLMLGVEIVDPQGEPDALGHPPANGELASLIQRECLRRGLILELGG---------------------RHGSVVR 435 (464)
T ss_pred ee-eccceEEEEEeccCcccccccccCCccHHHHHHHHHHHHHCCeEEeecC---------------------CCCCEEE
Confidence 11 112445556663210 112333332 66654321 0137899
Q ss_pred EeeCCCCCHHHHHHHHHHHHHHHHHH
Q psy8850 348 FTIGRFTTEKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 348 i~~~~~~~~~~i~~~~~~l~~~~~~~ 373 (397)
+.++..+|++|++++++++.+++.++
T Consensus 436 ~~Ppl~it~~eid~~~~~l~~~l~~~ 461 (464)
T PRK06938 436 FLPPLIITAEQIDEVAEIFAEAVAAA 461 (464)
T ss_pred EECCCccCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998765
No 337
>KOG1402|consensus
Probab=99.83 E-value=3.7e-18 Score=146.18 Aligned_cols=314 Identities=16% Similarity=0.163 Sum_probs=212.4
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCCCcchhhh-HHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhh-cc
Q psy8850 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWT-AEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFY-KK 84 (397)
Q Consensus 7 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~-~~ 84 (397)
+..+|.++++++++.+... ..++. ......+..+.+.++++.+ .+.-++.|.+|++.+++..+.|- ..
T Consensus 74 Ghchpki~~aLqeq~~kLt--------lssrafYnd~~~~f~~~vt~lf~~~--kvlpmnTGaEa~Eta~KLaR~wgy~~ 143 (427)
T KOG1402|consen 74 GHCHPKIIKALQEQADKLT--------LSSRAFYNDVLGEFAEYVTKLFGYD--KVLPMNTGAEAVETACKLARKWGYRK 143 (427)
T ss_pred CCCCHHHHHHHHHHHhHhh--------hhhHHHhhhhHHHHHHHHHHhcCcc--eeeecccchhHHHHHHHHHHHHHHhh
Confidence 3568999999999887632 11111 1357788899999999987 68888988999999999665332 11
Q ss_pred ---C--CCEEEEcCCCChh-hHHHH---------HHHhhC-CcEEEEeccCCCCCCCHHHHHHHhcC-CceEEEEecccC
Q psy8850 85 ---R--GKHIITVQTEHKS-VLDSI---------RKLEND-GFRVTYLKPKNNGLITLSQLEEKICS-DTILVSVMLVNN 147 (397)
Q Consensus 85 ---~--g~~vl~~~~~~~s-~~~~~---------~~~~~~-g~~v~~v~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~~ 147 (397)
| ..+|+.....|.+ +..++ +.++.. ...+..||++ |.++|+.++.+ +.+.++++.++.
T Consensus 144 K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y~-----d~eale~~l~~~~vaaFivEPIQG 218 (427)
T KOG1402|consen 144 KNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPYG-----DAEALEVALKSPNVAAFIVEPIQG 218 (427)
T ss_pred ccCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeeccC-----CHHHHHHHhcCCCeeEEEeecccc
Confidence 1 2344444444332 22222 111111 1124455554 89999999875 788999999999
Q ss_pred ccccccc----HHHHHHHHHhcCcEEEEecccccCc-----cccccCcccccEEEecccc-ccC-CCCceEEEEecCCCC
Q psy8850 148 EIGVIQP----ILEIGELCRSKGVIFHCDAAQAVGK-----IDINIQNYKVDLMSFSAHK-IYG-PKGIGALYIRRNPRT 216 (397)
Q Consensus 148 ~tG~~~~----l~~i~~l~~~~gi~livD~a~~~~~-----~~~~~~~~~~d~~~~s~~K-~~g-~~g~g~~~~~~~~~~ 216 (397)
..|++.| +++..++|++|++++|.|++|+.-. +..+.....+|++.+. | +.| ....+.++++++.+.
T Consensus 219 EaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~la~d~env~PDivilg--KalSGG~~Pvsavl~~~~im~ 296 (427)
T KOG1402|consen 219 EAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKLLACDYENVRPDIVILG--KALSGGVYPVSAVLADDDIML 296 (427)
T ss_pred ccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcEEEeehhhcCCCeEEEe--ccccCCeeeeEEEEecHHHHh
Confidence 9999888 7999999999999999999997322 2445666689999988 9 544 445788888887776
Q ss_pred ccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCc-EE-EeCCCCCCCCceE
Q psy8850 217 RIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEE-IY-INGDMNNRIPHNL 294 (397)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~-~~~~~~~~~~~~~ 294 (397)
.+++--+| .+.|..+ .+.....++|+.+.+ +++.++...+...|+..|.+ ++. +. +... ....+.+.
T Consensus 297 ~~~pgeHg------sTyggNp-Lg~~vaiAalevi~e--ekL~era~~lG~~l~~~L~~-l~~~~p~~v~~-VRGrGl~~ 365 (427)
T KOG1402|consen 297 NIKPGEHG------STYGGNP-LGCAVAIAALEVIVE--EKLVERAAKLGEILRDQLNK-LQKKFPHVVKE-VRGRGLLN 365 (427)
T ss_pred ccCCCccc------cccCCCh-HHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHh-ccccccchhhe-eeccceEE
Confidence 66665544 4445544 444444489998877 78889999999999999988 532 10 0111 11113344
Q ss_pred EEEec-----CCChHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHH
Q psy8850 295 NISFN-----FIEGESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLK 367 (397)
Q Consensus 295 ~~~~~-----~~~~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~ 367 (397)
.+.+. +.++.++...++ |+...+.. ++.|||.++..++++|+++.+++|.
T Consensus 366 ai~i~~~~~~~~~aw~~cl~lk~~g~LAkptH-----------------------~~IiRfaPPL~I~e~dl~eg~e~i~ 422 (427)
T KOG1402|consen 366 AIVINPSKTSGQDAWDVCLALKENGLLAKPTH-----------------------GNIIRFAPPLVISEEDLREGIEAIE 422 (427)
T ss_pred EEEeccccccchhHHHHHHcccccccccCCCC-----------------------CCeEEecCCcccCHHHHHHHHHHHH
Confidence 44443 233445555554 44444321 3789999999999999999999999
Q ss_pred HHHH
Q psy8850 368 MKVK 371 (397)
Q Consensus 368 ~~~~ 371 (397)
+.+.
T Consensus 423 k~i~ 426 (427)
T KOG1402|consen 423 KTIA 426 (427)
T ss_pred HHhc
Confidence 8764
No 338
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.83 E-value=1.5e-17 Score=157.87 Aligned_cols=322 Identities=15% Similarity=0.139 Sum_probs=189.5
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCC-CcEEEeCChhHHHHHHHHHhHhhhccC
Q psy8850 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADP-REIIWTSGATESNNLAIKGAAHFYKKR 85 (397)
Q Consensus 7 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~-~~i~~~~g~t~a~~~~l~~l~~~~~~~ 85 (397)
+..++.+.+++.+++.... .... .. .. .+...++.+.+++..+.+. +.++|++||++|++.+++.. +.++++
T Consensus 56 Gh~~~~i~~a~~~~~~~~~-~~~~-~~---~~-~~~~~~la~~l~~~~~~~~~~~~~f~~sGsea~e~Alkla-r~~~~r 128 (425)
T PRK08088 56 GHLHPKVVAAVEAQLKKLS-HTCF-QV---LA-YEPYLELCEKMNQKVPGDFAKKTLLVTTGSEAVENAVKIA-RAATKR 128 (425)
T ss_pred CCCCHHHHHHHHHHHhhCC-Cccc-cc---cC-CHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHH-HHHhCC
Confidence 4568999999999997622 1111 00 01 1233467777777776443 47999999999999999964 444455
Q ss_pred CCEEEEcCCCChhhHHHHHHHhhC------Cc-----EEEE--eccCCCCCCC----HHHHHHHhc-----CCceEEEEe
Q psy8850 86 GKHIITVQTEHKSVLDSIRKLEND------GF-----RVTY--LKPKNNGLIT----LSQLEEKIC-----SDTILVSVM 143 (397)
Q Consensus 86 g~~vl~~~~~~~s~~~~~~~~~~~------g~-----~v~~--v~~~~~~~~d----~~~l~~~i~-----~~~~~v~~~ 143 (397)
++.|.+ .++|++.......+... |. .+.. +|.+.++ .+ ++++++++. ++.++|+++
T Consensus 129 ~~iv~~-~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~l~~~l~~~~~~~~~aavi~E 206 (425)
T PRK08088 129 SGVIAF-TGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHG-VSEDDAIASIERIFKNDAAPEDIAAIIIE 206 (425)
T ss_pred CeEEEE-CCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCccccC-ccHHHHHHHHHHHHHhccCCCceEEEEEC
Confidence 444444 66666655444443210 11 0111 2222221 22 456888775 457888999
Q ss_pred cccCccccccc----HHHHHHHHHhcCcEEEEeccccc-Ccc----ccccCcccccEEEecccc-ccCCCCceEEEEecC
Q psy8850 144 LVNNEIGVIQP----ILEIGELCRSKGVIFHCDAAQAV-GKI----DINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRN 213 (397)
Q Consensus 144 ~~~~~tG~~~~----l~~i~~l~~~~gi~livD~a~~~-~~~----~~~~~~~~~d~~~~s~~K-~~g~~g~g~~~~~~~ 213 (397)
.+....|.+.+ +++|.++|++||+++|+|++|+. +.. .++.....+|+ .|++| +.++..+|+++++++
T Consensus 207 pi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~~~~~~~~~~~pdi--~s~sK~l~~G~rig~v~~~~~ 284 (425)
T PRK08088 207 PVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTLFAMEQMGVAADL--TTFAKSIAGGFPLAGVTGRAE 284 (425)
T ss_pred cccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhHHhhcCCCCCE--EEEeccccCCCcceeeEecHH
Confidence 88877787666 78999999999999999999873 221 11122224554 56669 544344899999877
Q ss_pred CCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---cCcEEEeCCCCCCC
Q psy8850 214 PRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMES---IEEIYINGDMNNRI 290 (397)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~~~~~~~~ 290 (397)
..+.+..... ....+ .+....++..+.++.... ++..+++++..+++++.|.+. .+.+..+...
T Consensus 285 ~~~~~~~~~~------~~t~~-~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~g~---- 351 (425)
T PRK08088 285 VMDAIAPGGL------GGTYA-GNPIACAAALAVLKVFEQ--ENLLQKANALGEKLKDGLLAIAEKHPEIGDVRGL---- 351 (425)
T ss_pred HHhhcCCCCC------CCCCC-cCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEecc----
Confidence 6555543221 12222 344455555567766543 233334444444444443331 3432222211
Q ss_pred CceEEEEecC-CC--------hHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHH
Q psy8850 291 PHNLNISFNF-IE--------GESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEI 359 (397)
Q Consensus 291 ~~~~~~~~~~-~~--------~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i 359 (397)
+.++++.+.. .+ ...+...+. |+.+.++..+ .+.||++++..+++++|
T Consensus 352 G~~~~l~l~~~~~~~~p~~~~~~~l~~~~~~~Gv~~~~~~~~---------------------~~~iRl~~~~~~t~~ei 410 (425)
T PRK08088 352 GAMIAIELFEDGDHSKPNAKLTAQIVARARDKGLILLSCGPY---------------------YNVLRILVPLTIEDAQI 410 (425)
T ss_pred ceEEEEEEecCCCCCCCCHHHHHHHHHHHHhCCCEEecCCCC---------------------CCEEEEECCCCcCHHHH
Confidence 4566777631 11 344554443 6665542111 27899999988899999
Q ss_pred HHHHHHHHHHHHHH
Q psy8850 360 DFTIKLLKMKVKKL 373 (397)
Q Consensus 360 ~~~~~~l~~~~~~~ 373 (397)
++.+++|.+++...
T Consensus 411 ~~~i~~l~~~l~~~ 424 (425)
T PRK08088 411 RQGLEIIAQCFDEA 424 (425)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999998754
No 339
>PRK07483 hypothetical protein; Provisional
Probab=99.83 E-value=1e-17 Score=158.82 Aligned_cols=339 Identities=15% Similarity=0.134 Sum_probs=200.2
Q ss_pred CCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhc--
Q psy8850 6 TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYK-- 83 (397)
Q Consensus 6 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~-- 83 (397)
.+..+|.|.+++++++.... ..+. . ....+...++.+.|+++.....+.++|++||++|++.+++.....+.
T Consensus 44 lGh~~p~v~~av~~ql~~~~-~~~~-~----~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~~~~~ 117 (443)
T PRK07483 44 LGHSHPRVIAAIHAQIDRLA-YAHT-S----FFTTEPAEALADRLVAAAPAGLEHVYFVSGGSEAVEAALKLARQYFVEI 117 (443)
T ss_pred cCCCCHHHHHHHHHHHHhcc-Cccc-c----ccCCHHHHHHHHHHHHhCCCCCCEEEEcCCcHHHHHHHHHHHHHHHHhc
Confidence 34678999999999998631 0011 0 01123456778888887754345899999999999999996543320
Q ss_pred --cCCCEEEEcCCCChhhH-HHHHHHhhC------C---cEEEEeccCCCCC-C------------CHHHHHHHhc----
Q psy8850 84 --KRGKHIITVQTEHKSVL-DSIRKLEND------G---FRVTYLKPKNNGL-I------------TLSQLEEKIC---- 134 (397)
Q Consensus 84 --~~g~~vl~~~~~~~s~~-~~~~~~~~~------g---~~v~~v~~~~~~~-~------------d~~~l~~~i~---- 134 (397)
..+.+|+....+|++.. .+....... + ..+..++...... . .++++++++.
T Consensus 118 g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 197 (443)
T PRK07483 118 GQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDEAYGQRLADELEAKILELGP 197 (443)
T ss_pred CCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 12356666555555554 333321100 0 1122233221110 0 1356776553
Q ss_pred CCceEEEEecccC-ccccccc----HHHHHHHHHhcCcEEEEecccc-cCcc----ccccCcccccEEEecccc-ccCCC
Q psy8850 135 SDTILVSVMLVNN-EIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKI----DINIQNYKVDLMSFSAHK-IYGPK 203 (397)
Q Consensus 135 ~~~~~v~~~~~~~-~tG~~~~----l~~i~~l~~~~gi~livD~a~~-~~~~----~~~~~~~~~d~~~~s~~K-~~g~~ 203 (397)
+++.+|+++.++. ..|.+.| ++.+.++|++||+++|+|+++. +|.. ..+.....+|+++++ | +.|+.
T Consensus 198 ~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~g--K~l~gG~ 275 (443)
T PRK07483 198 DTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLFACEEDGVAPDLVTIA--KGLGAGY 275 (443)
T ss_pred CceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcHHHHHhhcCCCCCeeeeh--hhhccCc
Confidence 4678999999886 3577665 7899999999999999999986 3322 112223468999987 9 65542
Q ss_pred -CceEEEEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEE
Q psy8850 204 -GIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYI 282 (397)
Q Consensus 204 -g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 282 (397)
.+|.++++++..+.+.... +......+.+. |...+++..++++.+.+ .++.++..++.++|++.|++......+
T Consensus 276 ~Pi~av~~~~~i~~~~~~~~--~~~~h~~T~~g-npl~~aaa~a~l~~i~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~ 350 (443)
T PRK07483 276 QPIGAVLASDRIYDAIADGS--GFFQHGHTYLG-HATACAAALAVQRVIAE--DGLLANVRARGEQLRARLRERLGQHPH 350 (443)
T ss_pred cccEEEEEcHHHHHHHhcCC--CccccCCCCCC-CHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 5899999876554443210 00011122333 44555566688888765 456777777788888777652122211
Q ss_pred eCCCCCCCCceEEEEecCC-------C-----hHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEE
Q psy8850 283 NGDMNNRIPHNLNISFNFI-------E-----GESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRF 348 (397)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~-------~-----~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi 348 (397)
+.+- ...+.++-+.+... + ...+...+. |+.+.+.....+ ...++.|||
T Consensus 351 i~~v-RG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~~~~~----------------~~~~~~l~~ 413 (443)
T PRK07483 351 VGDI-RGRGLFVGVELVADRATKAPFDPALKLHARIKREAMARGLMVYPMGGTID----------------GVRGDHVLL 413 (443)
T ss_pred eeeE-eecccEEEEEEeecccccCCCCchhhHHHHHHHHHHHCCcEEEecCcccc----------------CCCCCEEEE
Confidence 1110 11144455555311 0 123333333 777654211000 001378999
Q ss_pred eeCCCCCHHHHHHHHHHHHHHHHHHH
Q psy8850 349 TIGRFTTEKEIDFTIKLLKMKVKKLR 374 (397)
Q Consensus 349 ~~~~~~~~~~i~~~~~~l~~~~~~~~ 374 (397)
.++..++++++|+++++|.+++.++.
T Consensus 414 ~PpL~it~~eid~~~~~l~~~l~~~~ 439 (443)
T PRK07483 414 APPFIITAAQIDEIVERLGDAIDAAL 439 (443)
T ss_pred ECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998754
No 340
>PRK06149 hypothetical protein; Provisional
Probab=99.82 E-value=1.5e-17 Score=171.81 Aligned_cols=324 Identities=14% Similarity=0.132 Sum_probs=199.9
Q ss_pred CCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccC
Q psy8850 6 TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKR 85 (397)
Q Consensus 6 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~ 85 (397)
.+..+|.|.+++.+++.....+ + .+ ..+...++.+.|++++.-..+.++|++||++|++.+++.. +.++++
T Consensus 597 lGh~hp~v~~Ai~~q~~~l~~~--~-~~-----~~~~~~elae~L~~~~p~~~~~v~f~~SGsEA~e~AlklA-r~~tgr 667 (972)
T PRK06149 597 LGHGHPRLAAAAARQWSLLNTN--S-RF-----HYAAVAEFSERLAALAPDGLDTVFLVNSGSEANDLAIRLA-WAASGR 667 (972)
T ss_pred cCCCCHHHHHHHHHHHHhcccc--c-cc-----cCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHH-HHhcCC
Confidence 4557899999999998763211 1 11 1245677888888888543458999999999999999954 344454
Q ss_pred CCEEEEcCCCChh-hHHHHHHHhh----CC------cEEEEeccCCC--CC---CC-----HHHHHHHhc------CCce
Q psy8850 86 GKHIITVQTEHKS-VLDSIRKLEN----DG------FRVTYLKPKNN--GL---IT-----LSQLEEKIC------SDTI 138 (397)
Q Consensus 86 g~~vl~~~~~~~s-~~~~~~~~~~----~g------~~v~~v~~~~~--~~---~d-----~~~l~~~i~------~~~~ 138 (397)
.+|+....+|++ +..+...... .+ ..+..++.... +. .+ .+++++.+. +++.
T Consensus 668 -~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~iA 746 (972)
T PRK06149 668 -RDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRGLA 746 (972)
T ss_pred -CeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhcCCceE
Confidence 455555555554 4333222110 00 01233332211 11 11 234444332 3678
Q ss_pred EEEEecccCccccccc----HHHHHHHHHhcCcEEEEeccc-ccCccc-----cccCcccccEEEecccc-ccCCCCceE
Q psy8850 139 LVSVMLVNNEIGVIQP----ILEIGELCRSKGVIFHCDAAQ-AVGKID-----INIQNYKVDLMSFSAHK-IYGPKGIGA 207 (397)
Q Consensus 139 ~v~~~~~~~~tG~~~~----l~~i~~l~~~~gi~livD~a~-~~~~~~-----~~~~~~~~d~~~~s~~K-~~g~~g~g~ 207 (397)
+|+++.+....|.+.| ++++.++|++||+++|+|+++ ++|... .......+|+++++ | +.|+..+|+
T Consensus 747 avI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDivt~g--K~lg~G~Pl~a 824 (972)
T PRK06149 747 GFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDIITMA--KGMGNGHPLGA 824 (972)
T ss_pred EEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCCCCCEEEec--ccccCCeeeEE
Confidence 9999999988898888 899999999999999999998 454432 11123468999776 9 655556899
Q ss_pred EEEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CcEEEeCCC
Q psy8850 208 LYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESI-EEIYINGDM 286 (397)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~~ 286 (397)
++++++..+.+... + . .....+ .|...+++..++|+.+.+ +++.++.+++.++|++.|++ + ....+++.-
T Consensus 825 v~~~~~i~~~~~~~--~-~--~~sT~~-gnP~~~aaala~L~~i~~--e~l~~~~~~~G~~l~~~L~~-l~~~~~~i~~v 895 (972)
T PRK06149 825 VITRREIAEALEAE--G-Y--FFSSTG-GSPVSCRIGMAVLDVLRE--EKLQENARRVGDHLKARLEA-LADRHPLIGAV 895 (972)
T ss_pred EEEcHHHHhhhccC--C-c--ccCCCC-CCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHH-HHHhCCCeEEE
Confidence 99998766555431 1 0 011122 344555555578888765 45677787778888888876 3 111122110
Q ss_pred CCCCCceEEEEecCC------C---hHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCC
Q psy8850 287 NNRIPHNLNISFNFI------E---GESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTT 355 (397)
Q Consensus 287 ~~~~~~~~~~~~~~~------~---~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~ 355 (397)
...+.++-+.|... . ...+...+. |+.+.+.. ...+.|||.++..++
T Consensus 896 -rG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~l~~~Gvl~~~~g---------------------~~~~vl~~~Ppl~it 953 (972)
T PRK06149 896 -HGMGLYLGVELVRDRQTLEPATEETAAICDRLLELGVIMQPTG---------------------DHLNILKIKPPLCLD 953 (972)
T ss_pred -eecceEEEEEEecCcccCCCChHHHHHHHHHHHhCCeEEeecC---------------------CCCCEEEEECCCcCC
Confidence 11244555555311 1 123444443 77665421 012789999999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy8850 356 EKEIDFTIKLLKMKVKK 372 (397)
Q Consensus 356 ~~~i~~~~~~l~~~~~~ 372 (397)
++++|+++++|.+++.+
T Consensus 954 ~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 954 RESADFFVDMLDRVLTE 970 (972)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999999864
No 341
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.82 E-value=3.7e-18 Score=156.31 Aligned_cols=332 Identities=16% Similarity=0.162 Sum_probs=210.3
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhC-CCCCcEEEeCChhHHHHHHHHHhHhhhcc-
Q psy8850 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIY-ADPREIIWTSGATESNNLAIKGAAHFYKK- 84 (397)
Q Consensus 7 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~-~~~~~i~~~~g~t~a~~~~l~~l~~~~~~- 84 (397)
+...+++.+++.+++....- .+..+....+ -.++.++|+++.. -+-+.++|++|||+|++.+++.....+..
T Consensus 59 Gh~~~~i~~Ai~~Q~~~l~~-----~~~~~~t~~P-a~~LA~~L~~~aP~~~l~~vFf~~sGSeAvEtAlKma~qY~~~~ 132 (449)
T COG0161 59 GHGRPEIAEAIKKQLDKLPH-----VMFGGFTHEP-AIELAEKLAELAPEGGLDHVFFTDSGSEAVETALKMALQYWRAR 132 (449)
T ss_pred CcCCHHHHHHHHHHHHhCCc-----hhhcccCCch-HHHHHHHHHHhCCCCCccEEEEeCCchHHHHHHHHHHHHHHHhc
Confidence 35678999999999987321 1122222233 6778888889888 34668999999999999999976654432
Q ss_pred --C-CCEEEEcCCCChh-hHHHHHHHhhCC----------cEEEEeccCC------CCC------CCHHHHHHHhc----
Q psy8850 85 --R-GKHIITVQTEHKS-VLDSIRKLENDG----------FRVTYLKPKN------NGL------ITLSQLEEKIC---- 134 (397)
Q Consensus 85 --~-g~~vl~~~~~~~s-~~~~~~~~~~~g----------~~v~~v~~~~------~~~------~d~~~l~~~i~---- 134 (397)
+ +.+++.-...|++ +..++....... ..+..+|... .+. -.+++||++|.
T Consensus 133 G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~g~ 212 (449)
T COG0161 133 GQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEHGP 212 (449)
T ss_pred CCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHhcCc
Confidence 2 2346655555544 444433221000 1122233221 111 12567777775
Q ss_pred CCceEEEEecccCc-cccccc----HHHHHHHHHhcCcEEEEecccc-cCcc--cc--ccCcccccEEEecccc-c-cCC
Q psy8850 135 SDTILVSVMLVNNE-IGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKI--DI--NIQNYKVDLMSFSAHK-I-YGP 202 (397)
Q Consensus 135 ~~~~~v~~~~~~~~-tG~~~~----l~~i~~l~~~~gi~livD~a~~-~~~~--~~--~~~~~~~d~~~~s~~K-~-~g~ 202 (397)
++..+++++..... +|+++| ++++.++|++|||++|.|++-. +|.. .+ +.....+|+++.+ | + .|.
T Consensus 213 ~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi~PDi~~~a--KGLT~GY 290 (449)
T COG0161 213 ETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGKMFACEHAGIVPDILCLA--KGLTGGY 290 (449)
T ss_pred ccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCchhhhhhhcCCCCCeeeec--ccccccc
Confidence 46789999988877 788776 7999999999999999999854 3332 11 1222468999988 9 5 455
Q ss_pred CCceEEEEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEE
Q psy8850 203 KGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYI 282 (397)
Q Consensus 203 ~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 282 (397)
..+|.++++++..+.+..-. .+.+..+++.+.++....+++ +.|+.+++ +.+.++.++...+|.+.|.+.+.+...
T Consensus 291 ~Pl~a~l~~~~I~~~~~~~~-~~~f~HG~TYsghPlacAaAl-a~L~i~e~--e~l~~~~~~~~~~l~~~L~~~l~~~p~ 366 (449)
T COG0161 291 LPLSAVLTSDRIYEAFSDGD-AGAFMHGHTYSGNPLACAAAL-ANLDILEE--EDLLERVAEIGAYLQAGLQAALADHPL 366 (449)
T ss_pred hhhHhHhhhHHHHHHHhccc-CCeeccCCccccCHHHHHHHH-HHHHHHHh--cCHHHHHHHHHHHHHHHHHHhcccCCc
Confidence 56899999877665553322 333445566656555555555 77887775 556677778888888888762332222
Q ss_pred eCCCCCCCCceEEEEecC-CC---------hHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEee
Q psy8850 283 NGDMNNRIPHNLNISFNF-IE---------GESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTI 350 (397)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~-~~---------~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~ 350 (397)
+++- ...+.+..+.+.. .. ...+...+. |+.+++. +..+=+++
T Consensus 367 VgdV-R~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~e~Gl~iRp~------------------------g~~i~~~P 421 (449)
T COG0161 367 VGDV-RGLGLIGAIELVADKATKTPFEARVGARVRAAALERGLLIRPL------------------------GDVIYLMP 421 (449)
T ss_pred EEEe-eccceEEEEEEecccccccchhhhHHHHHHHHHHHCCeEEeec------------------------CCEEEEcC
Confidence 3221 1113344444432 11 233444442 7888765 26788999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHh
Q psy8850 351 GRFTTEKEIDFTIKLLKMKVKKLRE 375 (397)
Q Consensus 351 ~~~~~~~~i~~~~~~l~~~~~~~~~ 375 (397)
++.+|++||+++++++.+.+++..+
T Consensus 422 Pliit~~eid~l~~~l~~al~~~~~ 446 (449)
T COG0161 422 PLIITREEIDELVDALREALDETLA 446 (449)
T ss_pred CccCCHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999987654
No 342
>PRK07481 hypothetical protein; Provisional
Probab=99.82 E-value=1.6e-17 Score=157.96 Aligned_cols=332 Identities=15% Similarity=0.155 Sum_probs=198.5
Q ss_pred CCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCC-CCCcEEEeCChhHHHHHHHHHhHhhhc-
Q psy8850 6 TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYA-DPREIIWTSGATESNNLAIKGAAHFYK- 83 (397)
Q Consensus 6 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~i~~~~g~t~a~~~~l~~l~~~~~- 83 (397)
.+..+|++.+++++++...... .. . .+ ...+...++.+.|+++++. ..+.++|++||++|++.+++.....+.
T Consensus 56 lGh~~p~v~~Ai~~ql~~~~~~-~~--~-~~-~~~~~~~~lae~L~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~~~~ 130 (449)
T PRK07481 56 VGHNREEVKEAIVRQLDELEYY-ST--F-DG-TTHPRAIELSYELIDMFAPEGMRRVFFSSGGSDSVETALKLARQYWKV 130 (449)
T ss_pred CCCCCHHHHHHHHHHHHhccce-ec--c-cc-cCCHHHHHHHHHHHHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHHh
Confidence 3467899999999998762210 00 0 00 1124556788888888742 234799999999999999996543321
Q ss_pred ---cCCCEEEEcCCCChhhHHHHHHHhh-CC---------cEEEEeccCCC-----CCCCHHH--------HHHHhc---
Q psy8850 84 ---KRGKHIITVQTEHKSVLDSIRKLEN-DG---------FRVTYLKPKNN-----GLITLSQ--------LEEKIC--- 134 (397)
Q Consensus 84 ---~~g~~vl~~~~~~~s~~~~~~~~~~-~g---------~~v~~v~~~~~-----~~~d~~~--------l~~~i~--- 134 (397)
..+.+|+....+|++.......+.. .. ..+..++.+.. +.-|++. +|+.+.
T Consensus 131 ~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~~ 210 (449)
T PRK07481 131 RGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQG 210 (449)
T ss_pred cCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 1235677777766664432222210 00 11222332211 0013333 344442
Q ss_pred -CCceEEEEecccCccccccc----HHHHHHHHHhcCcEEEEecccc-cCcc----ccccCcccccEEEecccc-ccCC-
Q psy8850 135 -SDTILVSVMLVNNEIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKI----DINIQNYKVDLMSFSAHK-IYGP- 202 (397)
Q Consensus 135 -~~~~~v~~~~~~~~tG~~~~----l~~i~~l~~~~gi~livD~a~~-~~~~----~~~~~~~~~d~~~~s~~K-~~g~- 202 (397)
+++.+|+++.++...|.+.| ++++.++|++||+++|.|+++. +|.. ..+.....+|+++++ | +.|+
T Consensus 211 ~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~g--Kgl~gG~ 288 (449)
T PRK07481 211 PDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWGVKPDIMCLA--KGITSGY 288 (449)
T ss_pred CCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCchhhHhhhcCCCCCEEEEe--ecccCCC
Confidence 46889999999988898776 7899999999999999999976 3322 122233468999987 9 6554
Q ss_pred CCceEEEEecCCCCccccccc-cCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-cE
Q psy8850 203 KGIGALYIRRNPRTRIEAQIH-GGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIE-EI 280 (397)
Q Consensus 203 ~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~ 280 (397)
..+|+++++++..+.+..... .+......+.+. |...+++..++++.+.+ .++.++.+++.++|.+.|++ +. ..
T Consensus 289 ~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~g-npl~~aaa~a~L~~l~~--~~l~~~~~~~g~~l~~~L~~-l~~~~ 364 (449)
T PRK07481 289 VPLGATMVNARIADAFEANADFGGAIMHGYTYSG-HPVACAAALATLDIVVR--EDLPANAAKRGAYLLEGLQP-LKERF 364 (449)
T ss_pred cCceEEEEcHHHHHHHhccCccccccccCCCCCC-CHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHHHH-HhhcC
Confidence 258999998765444432110 000011122223 34455555578887765 45677778888888888876 32 12
Q ss_pred EEeCCCCCCCCceEEEEecCC-------C-----hHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceE
Q psy8850 281 YINGDMNNRIPHNLNISFNFI-------E-----GESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSI 346 (397)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~-------~-----~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~i 346 (397)
.++... ...+.++.+.+... + ...+...+. |+.+.+. ++.+
T Consensus 365 ~~i~~v-rG~Glm~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~------------------------g~~i 419 (449)
T PRK07481 365 ELVGDV-RGKGLMLALDLVADKATREPIDPSKGYANAVADVARENGVLVRPS------------------------GTKI 419 (449)
T ss_pred CCeEEE-eecceEEEEEecccccccCCCCchhHHHHHHHHHHHhCCeEEEec------------------------CCEE
Confidence 222111 11144555555311 1 122333332 6665432 2568
Q ss_pred EEeeCCCCCHHHHHHHHHHHHHHHHHH
Q psy8850 347 RFTIGRFTTEKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 347 Ri~~~~~~~~~~i~~~~~~l~~~~~~~ 373 (397)
||+++..+|++|||+++++|.++++++
T Consensus 420 ~l~Ppl~it~~eid~~~~~l~~~l~~~ 446 (449)
T PRK07481 420 ILSPPLVIQREDVDRIVDALDAGLSAV 446 (449)
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 999999899999999999999999764
No 343
>PRK07480 putative aminotransferase; Validated
Probab=99.82 E-value=1.3e-17 Score=158.64 Aligned_cols=332 Identities=15% Similarity=0.120 Sum_probs=198.7
Q ss_pred CCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhc--
Q psy8850 6 TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYK-- 83 (397)
Q Consensus 6 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~-- 83 (397)
.+..+|.|.+++++++....... .. .+ ...+...++.+.|+++++...+.++|++||++|++.+++....++.
T Consensus 64 lGh~~p~v~~Ai~~q~~~~~~~~---~~-~~-~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AlklAr~~~~~~ 138 (456)
T PRK07480 64 VGYGRKELADAAARQMRELPYYN---TF-FK-TTHPPAIELAAKLAEVAPPGFNHVFFTNSGSEANDTVLRMVRHYWALK 138 (456)
T ss_pred CCCCCHHHHHHHHHHHHhcCCcc---cc-cc-cCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhc
Confidence 34668999999999998631100 00 00 1234567788888888764445899999999999999996543321
Q ss_pred --cCCCEEEEcCCCChhhHHHHHHHhh-------CC---cEEEEeccCCCC----CCC--------HHHHHHHhc----C
Q psy8850 84 --KRGKHIITVQTEHKSVLDSIRKLEN-------DG---FRVTYLKPKNNG----LIT--------LSQLEEKIC----S 135 (397)
Q Consensus 84 --~~g~~vl~~~~~~~s~~~~~~~~~~-------~g---~~v~~v~~~~~~----~~d--------~~~l~~~i~----~ 135 (397)
..+.+|+....+|++.......+.. .+ ..+..++.+... ..+ ++.+++.+. +
T Consensus 139 g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 218 (456)
T PRK07480 139 GKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILELGAD 218 (456)
T ss_pred CCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCC
Confidence 1235677766666554422211110 01 011222221100 001 356665552 4
Q ss_pred CceEEEEecccCccccccc----HHHHHHHHHhcCcEEEEecccc-cCccc----cccCcccccEEEecccc-ccCC-CC
Q psy8850 136 DTILVSVMLVNNEIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKID----INIQNYKVDLMSFSAHK-IYGP-KG 204 (397)
Q Consensus 136 ~~~~v~~~~~~~~tG~~~~----l~~i~~l~~~~gi~livD~a~~-~~~~~----~~~~~~~~d~~~~s~~K-~~g~-~g 204 (397)
++.+|+++.++...|.+.| ++.+.++|++||+++|+|+++. +|..- .+.....+|+++++ | +.|+ ..
T Consensus 219 ~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~g--K~l~gG~~P 296 (456)
T PRK07480 219 NVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEWFGSQHFGIKPDLMTIA--KGLTSGYIP 296 (456)
T ss_pred cEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhhhhhcCCCCCeeeee--hhhccCCcc
Confidence 6789999999988898777 7899999999999999999985 43321 22233468998887 9 6553 24
Q ss_pred ceEEEEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhhcCcEEEe
Q psy8850 205 IGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRI-LFLQKRLYNGLMESIEEIYIN 283 (397)
Q Consensus 205 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~~~~~~~ 283 (397)
+|.++++++..+.+... .+......+.+ .|...+++..++|+.+.+ ..+.++. .++.++|.+.|++ +....++
T Consensus 297 i~av~~~~~i~~~~~~~--~~~~~~~~T~~-gnpl~~Aaa~a~L~~l~~--~~l~~~~~~~~g~~l~~~l~~-l~~~~~i 370 (456)
T PRK07480 297 MGAVGVGDRVAEVLIEE--GGEFNHGFTYS-GHPVAAAVALANLRILRD--EGIVERVRDDTGPYLQKRLRE-LADHPLV 370 (456)
T ss_pred ceEEEEcHHHHHHHhcC--CCCcccCCCCC-cCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHHH-hhcCCCe
Confidence 78888887654443110 01011122333 344556666688888765 3455666 4667777777766 4222111
Q ss_pred CCCCCCCCceEEEEecCCC-------h-----HHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEe
Q psy8850 284 GDMNNRIPHNLNISFNFIE-------G-----ESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFT 349 (397)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~-------~-----~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~ 349 (397)
..- ...+.++-+.|.... . ..+...+. |+.+.+. ++.+||+
T Consensus 371 ~~v-rG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~------------------------~~~l~~~ 425 (456)
T PRK07480 371 GEV-RGVGLVGAIELVKDKATRERFEAGGGVGTICRDHCFANGLIMRAV------------------------GDRMIIS 425 (456)
T ss_pred eeE-EeecceEEEEEeccccccccCcchhhHHHHHHHHHHHCCcEEeec------------------------CCEEEEE
Confidence 110 111445555553211 0 12322322 6655421 2679999
Q ss_pred eCCCCCHHHHHHHHHHHHHHHHHHHh
Q psy8850 350 IGRFTTEKEIDFTIKLLKMKVKKLRE 375 (397)
Q Consensus 350 ~~~~~~~~~i~~~~~~l~~~~~~~~~ 375 (397)
++..++++|||+++++|.+++.++.+
T Consensus 426 Ppl~it~~eid~~~~~l~~al~~~~~ 451 (456)
T PRK07480 426 PPLVITHAEIDELVEKARKALDATAA 451 (456)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988744
No 344
>PRK07046 aminotransferase; Validated
Probab=99.82 E-value=4.2e-17 Score=154.87 Aligned_cols=313 Identities=15% Similarity=0.143 Sum_probs=195.5
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCC
Q psy8850 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRG 86 (397)
Q Consensus 7 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g 86 (397)
+..+|.+.+++++++..-.. + +. ..+...++.+.|+++++ .+.+.|++|||+|++.+++.. +.+++ +
T Consensus 90 Gh~~p~i~~Av~~q~~~~~~------~--~~-~~~~~~~lAe~l~~~~~--~~~v~F~nSGtEA~e~AlrlA-R~~TG-r 156 (453)
T PRK07046 90 GHSPAPVARALAEQARRGLT------T--ML-PSEDAAWVGEELARRFG--LPYWQVATTATDANRFVLRWA-RAVTG-R 156 (453)
T ss_pred CCCCHHHHHHHHHHHHhCCC------C--CC-CCHHHHHHHHHHHHHhC--CCEEEEECCHHHHHHHHHHHH-HHhhC-C
Confidence 35679999999999876211 1 11 12456678888888875 458999999999999999954 44444 4
Q ss_pred CEEEEcCCCChhhHHH-HHHHhh--------C-Cc------EEEEeccCCCCCCCHHHHHHHhc-CCceEEEEecccCcc
Q psy8850 87 KHIITVQTEHKSVLDS-IRKLEN--------D-GF------RVTYLKPKNNGLITLSQLEEKIC-SDTILVSVMLVNNEI 149 (397)
Q Consensus 87 ~~vl~~~~~~~s~~~~-~~~~~~--------~-g~------~v~~v~~~~~~~~d~~~l~~~i~-~~~~~v~~~~~~~~t 149 (397)
++|+.....|++.... ...... . |. .+..+|.+ |++.+++.+. .+..+|+++..+...
T Consensus 157 ~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~n-----d~~~l~~~l~~~~vAavi~EPi~g~~ 231 (453)
T PRK07046 157 PKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEFN-----DLAALEAALADGDVAAVLAEPAMTNI 231 (453)
T ss_pred CEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCCC-----CHHHHHHHhCCCCeEEEEECCCCCCC
Confidence 7787777777665322 211100 0 11 12222322 7899999885 468899999998888
Q ss_pred ccccc----HHHHHHHHHhcCcEEEEecccc----cCccccccCcccccEEEecccc-ccCCCCceEEEEecCCCCcccc
Q psy8850 150 GVIQP----ILEIGELCRSKGVIFHCDAAQA----VGKIDINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEA 220 (397)
Q Consensus 150 G~~~~----l~~i~~l~~~~gi~livD~a~~----~~~~~~~~~~~~~d~~~~s~~K-~~g~~g~g~~~~~~~~~~~~~~ 220 (397)
|.+.| ++++.++|++||+++|+|++++ .|... ......+|+++++ | +.|+..+|++.++++..+.+.+
T Consensus 232 G~~~p~~~fl~~lr~lc~~~g~llI~DEV~tfr~g~Gg~~-~~~gv~PDi~t~g--K~lggG~Pi~av~g~~~i~~~~~~ 308 (453)
T PRK07046 232 GMVLPEPGFHEALRELTRRYGTLLVIDETHTISSGPGGYT-RAHGLEPDFLVVG--KPIAGGVPCAVYGFSAELAERAQA 308 (453)
T ss_pred CCcCCCHHHHHHHHHHHHHhCCEEEEEccccCccCCcchh-HHhCCCccceeeh--hhhcCCCcceeeeehHHHHHHHhh
Confidence 88777 7899999999999999999985 33322 1223468999876 9 6655568999998776555432
Q ss_pred ccc---cCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---cCc-EEEeCCCCCCCCce
Q psy8850 221 QIH---GGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMES---IEE-IYINGDMNNRIPHN 293 (397)
Q Consensus 221 ~~~---~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~-~~~~~~~~~~~~~~ 293 (397)
... .+......+.+ .|...+++..++|+.+.+ .+..++..++.++|++.|++. .+- ..+.+. +.+
T Consensus 309 ~~~~~~~~~~~~~~T~~-gnpl~~aa~~a~L~~l~~--~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v~g~-----G~~ 380 (453)
T PRK07046 309 AKASAPPGHSGIGTTLS-ANALAMAAMRATLAEVMT--EAAYAHMLALAARLAAGLRAVIARHGLPWHVTRV-----GAR 380 (453)
T ss_pred ccccCCCCCceeCCCCc-ccHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEe-----CcE
Confidence 110 01000111222 344556666678887754 345666666777777766541 221 122222 334
Q ss_pred EEEEecCCC-----------h----HHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCH
Q psy8850 294 LNISFNFIE-----------G----ESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTE 356 (397)
Q Consensus 294 ~~~~~~~~~-----------~----~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~ 356 (397)
+.+.|.... . ..+...+. |+.+.+. ++.+++++. +++
T Consensus 381 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~------------------------~~~~~~~p~--~t~ 434 (453)
T PRK07046 381 VEFQFAPTPPRNGAEAAAALDPELEAALHLYLLNRGVLITPF------------------------HNMMLVCPA--TTA 434 (453)
T ss_pred EEEEEeCCCCCCHHHHhcccCHHHHHHHHHHHHHCCCEEecc------------------------cCcEEEeCC--CCH
Confidence 555552111 0 11222222 5555431 255788875 799
Q ss_pred HHHHHHHHHHHHHHHHHH
Q psy8850 357 KEIDFTIKLLKMKVKKLR 374 (397)
Q Consensus 357 ~~i~~~~~~l~~~~~~~~ 374 (397)
+|||++++++.++++++.
T Consensus 435 ~did~~~~~~~~~l~~~~ 452 (453)
T PRK07046 435 ADVDRLVAAFDACLGELL 452 (453)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999999997753
No 345
>KOG1404|consensus
Probab=99.82 E-value=3.2e-18 Score=150.01 Aligned_cols=322 Identities=16% Similarity=0.192 Sum_probs=207.4
Q ss_pred CCCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhcc
Q psy8850 5 ATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKK 84 (397)
Q Consensus 5 ~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~ 84 (397)
+.+..+|.|.+++.+++...+ |.......+.+.++.+.|.+.+.-+-..++|++||++|++++++. .+.+++
T Consensus 63 slGHchP~v~~a~~kQl~~l~-------H~t~~~~~~pi~~~Ae~L~s~~P~~l~~vfF~nsGsEANelal~m-ar~Yt~ 134 (442)
T KOG1404|consen 63 SLGHCHPDVVAAAVKQLKKLY-------HTTSGYLNPPIHDLAEALVSKLPGDLKVVFFVNSGSEANELALKM-ARLYTG 134 (442)
T ss_pred EcCCCChHHHHHHHHhhhhhE-------EeeccccCCcHHHHHHHHHHhCCCCceEEEEecCCchHHHHHHHH-HHHhcC
Confidence 456788999999999997644 222223344567778888888877666799999999999999994 555656
Q ss_pred CCCEEEEcCCCChhhHHHHHHHhh--CCcE-------EEEecc-C-CCCCC-----------CHHHHHHHhc----CCce
Q psy8850 85 RGKHIITVQTEHKSVLDSIRKLEN--DGFR-------VTYLKP-K-NNGLI-----------TLSQLEEKIC----SDTI 138 (397)
Q Consensus 85 ~g~~vl~~~~~~~s~~~~~~~~~~--~g~~-------v~~v~~-~-~~~~~-----------d~~~l~~~i~----~~~~ 138 (397)
.-|.|-..+..|..+..++..... +... +...+. + ..+.. -.+++++.+. +...
T Consensus 135 ~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~~~vA 214 (442)
T KOG1404|consen 135 NLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDLILYDGPETVA 214 (442)
T ss_pred CceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHHHHHHHHHHhcCCCcee
Confidence 655555655555555544433211 1111 111111 1 00100 1244555542 3467
Q ss_pred EEEEecccCccccccc----HHHHHHHHHhcCcEEEEeccccc-Ccc----ccccCcccccEEEecccc-ccCCCCceEE
Q psy8850 139 LVSVMLVNNEIGVIQP----ILEIGELCRSKGVIFHCDAAQAV-GKI----DINIQNYKVDLMSFSAHK-IYGPKGIGAL 208 (397)
Q Consensus 139 ~v~~~~~~~~tG~~~~----l~~i~~l~~~~gi~livD~a~~~-~~~----~~~~~~~~~d~~~~s~~K-~~g~~g~g~~ 208 (397)
+++.+.++...|.+.+ +++..++|+++|.++|.|++++. |.. .++-...-+|+++.+ | +.+...+|.+
T Consensus 215 afiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG~~wgfe~h~v~PDIvTmA--KgiGnG~Pl~AV 292 (442)
T KOG1404|consen 215 AFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTGHMWGFESHGVVPDIVTMA--KGIGNGFPLGAV 292 (442)
T ss_pred EEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhccccccccccccccCCCccHHHHH--hhccCCCcceee
Confidence 8899999999898766 79999999999999999999872 221 233333357777666 9 6666678999
Q ss_pred EEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCC
Q psy8850 209 YIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNN 288 (397)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 288 (397)
+.+++....+..... ..++.+..+....+++ +.++.+.+ +++.++......+|.+.|.+......++++--.
T Consensus 293 vtt~EIa~v~~~~~~-----~fnTyggnP~a~avg~-aVL~Vike--e~LqE~aa~vG~yl~~~l~~l~d~h~iIGdVRG 364 (442)
T KOG1404|consen 293 VTTPEIADVLNQKSS-----HFNTYGGNPVACAVGL-AVLKVIKE--ENLQENAAEVGSYLLEKLAALKDKHPIIGDVRG 364 (442)
T ss_pred ecCHHHHHHHHhccc-----cccccCCCchhHHHHH-HHHHHHHH--HhHHHHHHHHHHHHHHHHHHHhhcCCceeeccc
Confidence 999876655544332 2345566666666666 77887776 788899999999999999884344555554221
Q ss_pred CCCceEEEEecCCC----------hHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCH
Q psy8850 289 RIPHNLNISFNFIE----------GESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTE 356 (397)
Q Consensus 289 ~~~~~~~~~~~~~~----------~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~ 356 (397)
+ +.++=+.+-... ...+.+.++ |+.+-.|. ..++.+||+++..+|+
T Consensus 365 ~-GLm~GvE~V~dk~~~~pp~~~~~~~i~~~cke~Gvlvg~g~---------------------i~G~vfriaPPlciT~ 422 (442)
T KOG1404|consen 365 R-GLMLGVELVSDKSEPKPPATAEGAVIGEQCKELGVLVGKGG---------------------IHGNVFRIAPPLCITK 422 (442)
T ss_pred c-eeEEEEEEecccCCCCCcchHHHHHHHHHHHHhCeeeeccc---------------------ccceEEEecCCeeccH
Confidence 1 223333332111 123444444 66664332 1237899999999999
Q ss_pred HHHHHHHHHH
Q psy8850 357 KEIDFTIKLL 366 (397)
Q Consensus 357 ~~i~~~~~~l 366 (397)
+|+|.+++..
T Consensus 423 edi~f~~~~~ 432 (442)
T KOG1404|consen 423 EDIDFAVEYF 432 (442)
T ss_pred HHHHHHHHHH
Confidence 9998887765
No 346
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.82 E-value=1.2e-17 Score=162.49 Aligned_cols=312 Identities=13% Similarity=0.075 Sum_probs=206.0
Q ss_pred HHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCC-
Q psy8850 42 AIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN- 120 (397)
Q Consensus 42 ~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~- 120 (397)
.+.+.++.+|+.||++. ..++++|+|.++..++.+++ ++||.|++..++|.|...++.+. |+.+++++...
T Consensus 196 ~i~eAe~~AA~~fgAd~-tyfvvNGTS~~n~av~~a~~----~~Gd~VLvdRN~HKSv~haLils---ga~PVYl~P~rn 267 (714)
T PRK15400 196 PHKEAEEYIARVFNADR-SYMVTNGTSTANKIVGMYSA----PAGSTVLIDRNCHKSLTHLMMMS---DVTPIYFRPTRN 267 (714)
T ss_pred HHHHHHHHHHHHhCCCc-EEEEeCchHHHHHHHHHHhc----CCCCEEEeecccHHHHHHHHHHc---CCeEEEeccccc
Confidence 67889999999999983 68889999999999999988 89999999999999999988887 99999987652
Q ss_pred -C---CCCC-----HHHHHHHhcCC-----ceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCc--cc-c-
Q psy8850 121 -N---GLIT-----LSQLEEKICSD-----TILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGK--ID-I- 182 (397)
Q Consensus 121 -~---~~~d-----~~~l~~~i~~~-----~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~--~~-~- 182 (397)
. +.++ .+.+++++.+. +..++++++ |.-|.+++++.|+++|+.++ +++|+||+... .+ +
T Consensus 268 ~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~p-TYdG~~yd~~~I~~~~~~~~--ilvDEAwgah~~F~p~~~ 344 (714)
T PRK15400 268 AYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPIYE 344 (714)
T ss_pred ccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECC-CCccEecCHHHHHHHhCCCC--EEEEccchhhhccCcccC
Confidence 2 3455 89999998753 236788877 55699999999999999887 69999998322 11 1
Q ss_pred ccC--cccc---c--EEEecccc-ccCCCCceEEEEecCCC-CccccccccCCccccccCCCCchhHHHHHHHHHHHHHH
Q psy8850 183 NIQ--NYKV---D--LMSFSAHK-IYGPKGIGALYIRRNPR-TRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARI 253 (397)
Q Consensus 183 ~~~--~~~~---d--~~~~s~~K-~~g~~g~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~ 253 (397)
+.. ..+. | +++.|.|| +.+....+++.++.... +++...+ .-+.+++|+++.++++..+..++..
T Consensus 345 ~~sam~~ga~~~~~i~vtQStHKtL~alTQaS~LHvkg~vd~~~~n~a~------~m~~STSPsY~l~ASLD~a~~~m~~ 418 (714)
T PRK15400 345 GKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVNEETFNEAY------MMHTTTSPHYGIVASTETAAAMMKG 418 (714)
T ss_pred CcChhhcCCCCCCceEEEEchhhcccchhHHhHHHHcCCCCHHHHHHHH------HHHcCCCcHHHHHHHHHHHHHHHHh
Confidence 111 1234 4 99999999 77777778887765321 1121211 1234567888888889888888764
Q ss_pred -HHHHHHHHHHHHHHHHHHHHhhhcCc------EEEeCCCCCCCCceE-------EEEecCCChHHH-HHHhCCcEe-cc
Q psy8850 254 -EMKEELKRILFLQKRLYNGLMESIEE------IYINGDMNNRIPHNL-------NISFNFIEGESL-LMAIKDIAV-SS 317 (397)
Q Consensus 254 -~~~~~~~~~~~~~~~l~~~l~~~~~~------~~~~~~~~~~~~~~~-------~~~~~~~~~~~~-~~~l~~i~~-~~ 317 (397)
.-.++.+...+.+..+++.|.+ +++ +.++.++.......+ |-.|.+...... .+.++ +.+ .+
T Consensus 419 ~~G~~l~~~~i~~a~~~R~~l~~-~~~~~~~w~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP~K-lti~tp 496 (714)
T PRK15400 419 NAGKRLINGSIERAIKFRKEIKR-LRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIK-VTLLTP 496 (714)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHh-CCCcccCceEEecChhhcccchhcccCccccccCcccccccccccCCce-EEEEeC
Confidence 4567778888888889999988 766 555532210000000 001111100000 11111 111 11
Q ss_pred cCccC-----CCC--CChhhHHHhhCCCcccc-CceEEEeeCCCCCHHHHHHHHHHHHHHHHH
Q psy8850 318 GSACT-----SAS--LEPSYVLRALGCNDELA-HSSIRFTIGRFTTEKEIDFTIKLLKMKVKK 372 (397)
Q Consensus 318 g~~~~-----~~~--~~~~~~~~~~g~~~~~~-~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 372 (397)
|.... .|. ..-...|+..|+...+. ...+-+.++...+++++++++++|.++-+.
T Consensus 497 gi~~~g~~~~~Gipg~~v~~~L~e~gI~~E~~d~~~iLfl~s~g~t~~~~~~L~~aL~~f~~~ 559 (714)
T PRK15400 497 GMKKDGTMSDFGIPASIVAKYLDEHGIVVEKTGPYNLLFLFSIGIDKTKALSLLRALTDFKRA 559 (714)
T ss_pred CCCCCccccccCCCHHHHHHHHHHcCCEEEecCCCeEEEEeCCCCCHHHHHHHHHHHHHHHHh
Confidence 21000 000 00123455566655443 356777777778999999999999987554
No 347
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.82 E-value=2.8e-17 Score=151.83 Aligned_cols=301 Identities=16% Similarity=0.128 Sum_probs=195.6
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHH-HHHHhhCCcEEEEecc-
Q psy8850 41 KAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDS-IRKLENDGFRVTYLKP- 118 (397)
Q Consensus 41 ~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~-~~~~~~~g~~v~~v~~- 118 (397)
+...++++.+++++|.+ .++.+++||.|++++....+ ++||+| +...|.....+ +... |....-+..
T Consensus 78 ~s~~~LE~~vAe~lG~e--~aV~v~sGTaAl~ll~~l~v----~pGd~V--p~n~~f~Tt~ahI~~~---Ga~fvDi~~d 146 (460)
T PRK13237 78 RNFYHLEETVQEYYGFK--HVVPTHQGRGAENLLSRIAI----KPGQYV--PGNMYFTTTRYHQELN---GGIFVDIIID 146 (460)
T ss_pred CcHHHHHHHHHHHHCCC--eEEEeCCHHHHHHHHHHhCC----CCcCEE--CCccchHhhHHHHHhC---CcEEEeeecc
Confidence 35678999999999988 69999999999998655444 788965 55555555444 4433 665444421
Q ss_pred ---------CCCCCCCHHHHHHHhcCC----ceEEEEecccCcc-cccc---cHHHHHHHHHhcCcEEEEecccccCccc
Q psy8850 119 ---------KNNGLITLSQLEEKICSD----TILVSVMLVNNEI-GVIQ---PILEIGELCRSKGVIFHCDAAQAVGKID 181 (397)
Q Consensus 119 ---------~~~~~~d~~~l~~~i~~~----~~~v~~~~~~~~t-G~~~---~l~~i~~l~~~~gi~livD~a~~~~~~~ 181 (397)
..+|.+|++.++++|+++ +++++++.++|.. |... +++++.++|++||++||+|+++.++...
T Consensus 147 ~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~gna~ 226 (460)
T PRK13237 147 EAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCVENAY 226 (460)
T ss_pred cccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchhcChh
Confidence 236889999999999863 4467777777776 5665 4789999999999999999999877321
Q ss_pred --------c---ccC------cccccEEEecccc-ccCCCCceEEEEecC-CCCccccc--cccCCccccccCCCCchhH
Q psy8850 182 --------I---NIQ------NYKVDLMSFSAHK-IYGPKGIGALYIRRN-PRTRIEAQ--IHGGGHEYGLRSGTLATHQ 240 (397)
Q Consensus 182 --------~---~~~------~~~~d~~~~s~~K-~~g~~g~g~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 240 (397)
. ++. ....|.+++|++| ..++.| |++..+++ +.++++.. .+.|. ...|.....-
T Consensus 227 fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~G-G~i~t~D~eL~~~~r~~~~~~eG~----~tygg~~grd 301 (460)
T PRK13237 227 FIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNIG-GFLAMNDEELFDEAKELVVVYEGM----PSYGGMAGRD 301 (460)
T ss_pred hhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCCc-eEEEECCHHHHHHHHHhccccCCC----cCCCChhhhH
Confidence 1 110 1157999999999 666765 88888765 33333332 11111 1233444445
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEe----cCC-----ChHHHHHHhC
Q psy8850 241 IVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISF----NFI-----EGESLLMAIK 311 (397)
Q Consensus 241 ~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-----~~~~~~~~l~ 311 (397)
+.++...+....+ ..+.++.....++|.+.|.+ .|+.+..+.+ ++.+.+.. +.+ +...+...|-
T Consensus 302 ~~alAvgl~E~~~--~~y~~~ri~~~~~l~~~L~~--~Gvpv~~p~g---gH~v~vda~~~lph~~~~~~p~~al~~~ly 374 (460)
T PRK13237 302 MEAMAIGIEESVQ--YEYIEHRVGQVRYLGEKLLA--AGVPIVEPVG---GHAVFLDARRFLPHLPQDQFPAQALAAELY 374 (460)
T ss_pred HHHHHhHHHhhch--HHHHHHHHHHHHHHHHHHHH--CCCceecCCC---ceEEEEEhHHhCCCCCcccChHHHHHHHHH
Confidence 6667666665544 25666667778999999988 7888887654 45555543 222 2344544443
Q ss_pred ---CcEe-cccCccCCCCCChhhHHHhhCCCc----ccc--CceEEEeeC-CCCCHHHHHHHHHHHHHHHHHHHhcC
Q psy8850 312 ---DIAV-SSGSACTSASLEPSYVLRALGCND----ELA--HSSIRFTIG-RFTTEKEIDFTIKLLKMKVKKLRELS 377 (397)
Q Consensus 312 ---~i~~-~~g~~~~~~~~~~~~~~~~~g~~~----~~~--~~~iRi~~~-~~~~~~~i~~~~~~l~~~~~~~~~~~ 377 (397)
||.- .-|+... |.++ ... -..+|+.++ -.-|.+.+|..+++|..+.++-..+.
T Consensus 375 ~~~GiR~~e~g~~~~-------------~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~~~~~~ 438 (460)
T PRK13237 375 IESGVRSMERGIVSA-------------GRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYKHREDIR 438 (460)
T ss_pred HHhCcCeEeecceec-------------ccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHHHHHHhHhhcC
Confidence 4322 2232211 1111 011 267999987 33579999999999998887665544
No 348
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.81 E-value=1.7e-17 Score=157.27 Aligned_cols=311 Identities=14% Similarity=0.127 Sum_probs=192.6
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCC
Q psy8850 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRG 86 (397)
Q Consensus 7 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g 86 (397)
+..+|.|.+++.+++.... . +.. ..+...++.+.|.+.+. ..+.++|++||++|++.+++... .+++ +
T Consensus 68 Gh~~p~v~~ai~~q~~~~~---~---~~~---~~~~~~~la~~l~~~~p-~~~~v~f~~sGseA~e~AlklAr-~~tg-r 135 (428)
T PRK12389 68 GHAHPHITKAITEAAENGV---L---YGT---PTELEIEFAKMLKEAIP-SLEKVRFVNSGTEAVMTTIRVAR-AYTG-R 135 (428)
T ss_pred CCCCHHHHHHHHHHHHhCC---c---cCC---CCHHHHHHHHHHHHhCC-CCcEEEEeCCHHHHHHHHHHHHH-HhhC-C
Confidence 4568999999999987621 1 111 12345667777777765 24579999999999999999644 4433 4
Q ss_pred CEEEEcCCCChhhHHHHHHHhhC-----------Cc------EEEEeccCCCCCCCHHHHHHHhc---CCceEEEEeccc
Q psy8850 87 KHIITVQTEHKSVLDSIRKLEND-----------GF------RVTYLKPKNNGLITLSQLEEKIC---SDTILVSVMLVN 146 (397)
Q Consensus 87 ~~vl~~~~~~~s~~~~~~~~~~~-----------g~------~v~~v~~~~~~~~d~~~l~~~i~---~~~~~v~~~~~~ 146 (397)
.+|+.....|++........... |+ .+..+|. .|++.+++.+. +++.+|+++.+.
T Consensus 136 ~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~~~~vaavi~EPv~ 210 (428)
T PRK12389 136 TKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPF-----NDIEALKEALDKWGDEVAAVLVEPIV 210 (428)
T ss_pred CEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCC-----CCHHHHHHHHHhcCCcEEEEEEeCCC
Confidence 66776666666654333322110 10 1112222 27889988885 467899999999
Q ss_pred Cccccccc----HHHHHHHHHhcCcEEEEecccccCccc----cccCcccccEEEecccc-ccCCCCceEEEEecCCCCc
Q psy8850 147 NEIGVIQP----ILEIGELCRSKGVIFHCDAAQAVGKID----INIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTR 217 (397)
Q Consensus 147 ~~tG~~~~----l~~i~~l~~~~gi~livD~a~~~~~~~----~~~~~~~~d~~~~s~~K-~~g~~g~g~~~~~~~~~~~ 217 (397)
+..|.+.| +++|.++|++||+++|+|++++..... .......+|+++++ | +.|+..+|.++++++..+.
T Consensus 211 g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~Rt~~~~a~~~~gv~PDivt~g--K~lggG~Pi~av~~~~~i~~~ 288 (428)
T PRK12389 211 GNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFRFMYGGAQDLLGVEPDLTALG--KIIGGGLPIGAYGGRKDIMEQ 288 (428)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccccccccCcchhhHHhCCCCCeeeec--hhhcCCCceeEEeEHHHHHhh
Confidence 99999888 899999999999999999998743211 11123368988776 9 6554557888888766555
Q ss_pred cccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---cCcE-EEeCCCCCCCCce
Q psy8850 218 IEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMES---IEEI-YINGDMNNRIPHN 293 (397)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~~-~~~~~~~~~~~~~ 293 (397)
+.+. + ......+.+ .|...+++..++|+.+.+ ..+.+++.++.++|++.|++. .+.. .+... .++
T Consensus 289 ~~~~--~-~~~~~~T~~-gnpl~~Aaala~L~~l~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~v~r~-----~g~ 357 (428)
T PRK12389 289 VAPL--G-PAYQAGTMA-GNPASMAAGIACLEVLQQ--EGVYEKLDRLGAMLEEGILEAAEKHGITITINRL-----KGA 357 (428)
T ss_pred hccC--C-CcccccCCc-cCHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEec-----CcE
Confidence 4321 0 000111222 344556666688888765 356777888888888888761 1211 11111 224
Q ss_pred EEEEecCCC--------------hHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHH
Q psy8850 294 LNISFNFIE--------------GESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEK 357 (397)
Q Consensus 294 ~~~~~~~~~--------------~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~ 357 (397)
+.+.+.... ...+...+. |+.+.+.. .+.+ .++..++++
T Consensus 358 ~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~-----------------------~~~~--~~~l~~t~e 412 (428)
T PRK12389 358 LTVYFTDEKVTNYDQAERSDGEAFGKFFKLMLNQGINLAPSK-----------------------YEAW--FLTTAHTEE 412 (428)
T ss_pred EEEEEeCCCCCChhhhcccCHHHHHHHHHHHHHCCcEeecCC-----------------------CCCe--eecCCCCHH
Confidence 444443111 123333333 66665421 0223 345567999
Q ss_pred HHHHHHHHHHHHHHH
Q psy8850 358 EIDFTIKLLKMKVKK 372 (397)
Q Consensus 358 ~i~~~~~~l~~~~~~ 372 (397)
||+++++++.+++++
T Consensus 413 ~id~~~~~l~~~l~~ 427 (428)
T PRK12389 413 DIEETLEAVDRAFAQ 427 (428)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998864
No 349
>KOG3846|consensus
Probab=99.81 E-value=3.3e-18 Score=145.11 Aligned_cols=345 Identities=17% Similarity=0.167 Sum_probs=247.6
Q ss_pred CCCCCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHH-HHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhh
Q psy8850 3 YSATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEK-ARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHF 81 (397)
Q Consensus 3 ~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~ 81 (397)
..|.+.+|+.+.+.+.+.+..+. .-....|..|-..+....+ +-..++.+.|+..++|.+.++-|.-++.++-++...
T Consensus 73 GNSLGLmPK~t~~~~~~eLDkWa-k~av~gH~~GkvPW~~~De~il~l~~~iVGA~e~EvavmNsLTvNlh~Ll~sFyKP 151 (465)
T KOG3846|consen 73 GNSLGLMPKSTRNSINAELDKWA-KCAVEGHFKGKVPWVSIDEPILPLLAPIVGAQENEVAVMNSLTVNLHSLLISFYKP 151 (465)
T ss_pred ccccccCchhhHhHHHHHHHHHH-hhhhhcccccccceeecchhhhhhhhhhccCCchhhhhHhhhhhHHHHHHHHhcCC
Confidence 45677899999999988887633 2221133333333333333 677889999998888999999998888888777632
Q ss_pred hccCCCEEEEcCCCChhhHHHHHHHhhC-CcEEE----Eecc-CCCCCCCHHHHHHHhcC---CceEEEEecccCccccc
Q psy8850 82 YKKRGKHIITVQTEHKSVLDSIRKLEND-GFRVT----YLKP-KNNGLITLSQLEEKICS---DTILVSVMLVNNEIGVI 152 (397)
Q Consensus 82 ~~~~g~~vl~~~~~~~s~~~~~~~~~~~-g~~v~----~v~~-~~~~~~d~~~l~~~i~~---~~~~v~~~~~~~~tG~~ 152 (397)
. ..+-+|+.....|||-+.+++...+. |.++. .+.. +.+..+..+++-+-|+. ..++|+++.+++.||..
T Consensus 152 T-ekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~iePREGEetlRteDILd~IEkngDeiA~v~fSGvqyYTGQ~ 230 (465)
T KOG3846|consen 152 T-EKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEPREGEETLRTEDILDTIEKNGDEIALVCFSGVQYYTGQY 230 (465)
T ss_pred c-chhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEecccccccchhHHHHHHHHHhcCCeEEEEEeecceeecccc
Confidence 2 33478999999999999999887654 65532 2222 22345777888877764 47899999999999999
Q ss_pred ccHHHHHHHHHhcCcEEEEecccccCccccccCcccccEEEecccc-c-cCCCCceEEEEecCCCCccccccccCCc---
Q psy8850 153 QPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHK-I-YGPKGIGALYIRRNPRTRIEAQIHGGGH--- 227 (397)
Q Consensus 153 ~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~~s~~K-~-~g~~g~g~~~~~~~~~~~~~~~~~~~~~--- 227 (397)
.++..|...-+..|++|-.|-+|++|.+++.+..|++|+-|...+| + .|+.|+|-+++..+......+.+.||..
T Consensus 231 Fdi~aIT~Agq~kgc~VGfDLAHAvgNVpL~LHdWgVDFACWCSYKYlnaGaGgIgGlFvHekh~~~~~prl~GWwgh~~ 310 (465)
T KOG3846|consen 231 FDIGAITFAGQFKGCLVGFDLAHAVGNVPLQLHDWGVDFACWCSYKYLNAGAGGIGGLFVHEKHTKESLPRLAGWWGHDP 310 (465)
T ss_pred cchhhhhhcccCCCcEechhhhhhhcCCceEEeecCCceEEEeeecccccCCCccceeeeehhhhcchhhHHhhhccCCc
Confidence 9999999777778999999999999999999999999999999999 4 5566777777766655566665555532
Q ss_pred ---------------cccccCCCCchhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhhcCc-----------E
Q psy8850 228 ---------------EYGLRSGTLATHQIVGMGEAFRLARI-EMKEELKRILFLQKRLYNGLMESIEE-----------I 280 (397)
Q Consensus 228 ---------------~~~~~~~~~~~~~~~~l~~al~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~-----------~ 280 (397)
..+|+.+.|+.....++...++...+ .+.+++.+-.-+..+|...++. ..+ +
T Consensus 311 s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~q~~~~~lRkrS~lLTgYleyL~k~-~~g~~~~~rt~Kl~~ 389 (465)
T KOG3846|consen 311 SKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFAQFNINELRKRSLLLTGYLEYLLKA-SKGYKHPLRTEKLFF 389 (465)
T ss_pred chhhhhccccccCccccccccCCCcHhHHHHHHhhHHHHHHhhHHHHhhhhhhHHhHHHHHHHH-hcccCchhhhcceeE
Confidence 24677888889999999999998765 3677777777777777666554 222 3
Q ss_pred EEeCCCC-CCCCceEEEEecCCChHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEee-CCCCCH
Q psy8850 281 YINGDMN-NRIPHNLNISFNFIEGESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTI-GRFTTE 356 (397)
Q Consensus 281 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~-~~~~~~ 356 (397)
.+..+.. ...+..+.+.|.. +...+...|. |+... ...++.||+.+ +.|++-
T Consensus 390 ~IiTP~~~~erGcQLsl~Fss-p~~~vfqeL~krGv~~D-----------------------kR~PNvIRvAPvpLYN~f 445 (465)
T KOG3846|consen 390 TIITPTSTDERGCQLSLYFSS-PTPKVFQELHKRGVIGD-----------------------KRRPNVIRVAPVPLYNTF 445 (465)
T ss_pred EEeCCcccccccceEEEEeCC-CchHHHHHHHHcCeecc-----------------------ccCCCceEeecchhhccH
Confidence 3333321 1223445556653 3355665554 44332 23458999975 578999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q psy8850 357 KEIDFTIKLLKMKVKKLR 374 (397)
Q Consensus 357 ~~i~~~~~~l~~~~~~~~ 374 (397)
.||-+++++|.+++..+.
T Consensus 446 ~Dvy~f~n~L~e~~d~~e 463 (465)
T KOG3846|consen 446 SDVYIFVNALNEAMDKLE 463 (465)
T ss_pred HHHHHHHHHHHHHHHHhh
Confidence 999999999999987653
No 350
>PRK06917 hypothetical protein; Provisional
Probab=99.81 E-value=3.6e-17 Score=155.37 Aligned_cols=338 Identities=12% Similarity=0.075 Sum_probs=200.8
Q ss_pred CCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhc--
Q psy8850 6 TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYK-- 83 (397)
Q Consensus 6 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~-- 83 (397)
.+..+|.|.+++++++.... . .+... ...+...++.+.|++++....+.++|++||++|++.+++.....+.
T Consensus 45 lGh~hp~v~~Ai~~ql~~~~---~--~~~~~-~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~~~~r 118 (447)
T PRK06917 45 IGHGVKEIADAIKEQAEEVS---F--VYRSQ-FTSEPAEKLAKKLSDLSPGDLNWSFFVNSGSEANETAMKIAIQHFQER 118 (447)
T ss_pred CCCCCHHHHHHHHHHHhhCc---C--ccccc-cCCHHHHHHHHHHHHhCCCCCCEEEEeCChHHHHHHHHHHHHHHHHhc
Confidence 35678999999999998621 1 00000 1124456788888888764445799999999999999996643221
Q ss_pred --cCCCEEEEcCCCChhhHHHHHHHhh-CCc---------EEEEeccCCCCC------------CCHHHHHHHhc----C
Q psy8850 84 --KRGKHIITVQTEHKSVLDSIRKLEN-DGF---------RVTYLKPKNNGL------------ITLSQLEEKIC----S 135 (397)
Q Consensus 84 --~~g~~vl~~~~~~~s~~~~~~~~~~-~g~---------~v~~v~~~~~~~------------~d~~~l~~~i~----~ 135 (397)
..+.+|+.....|++.......+.. .+. .+..+|...... -+++.+++.+. +
T Consensus 119 g~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~ 198 (447)
T PRK06917 119 GIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATELETAIERIGAE 198 (447)
T ss_pred CCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCC
Confidence 1236777777666665543332211 000 112222111000 12456677764 3
Q ss_pred CceEEEEecccCc-cccccc----HHHHHHHHHhcCcEEEEecccc-cCccc----cccCcccccEEEecccc-ccCCC-
Q psy8850 136 DTILVSVMLVNNE-IGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKID----INIQNYKVDLMSFSAHK-IYGPK- 203 (397)
Q Consensus 136 ~~~~v~~~~~~~~-tG~~~~----l~~i~~l~~~~gi~livD~a~~-~~~~~----~~~~~~~~d~~~~s~~K-~~g~~- 203 (397)
++.+|+++.+... .|.+.| ++.+.++|++||+++|+|+++. +|..- .......+|+++++ | +.|+.
T Consensus 199 ~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~a~~~~gv~PDi~~~g--K~l~~G~~ 276 (447)
T PRK06917 199 HIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGAMFAMEHWGVEPDIMTLG--KGLGAGYT 276 (447)
T ss_pred ceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccchhhHHhcCCCCCEEEee--ehhccCCc
Confidence 6889999988764 456655 7899999999999999999986 22211 12223368998887 9 65442
Q ss_pred CceEEEEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-cEEE
Q psy8850 204 GIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIE-EIYI 282 (397)
Q Consensus 204 g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~ 282 (397)
.+|++.++++....+.+.. +......+.+ .|...+++..++++.+.+ ..+.+++.++.++|++.|++ +. ...+
T Consensus 277 Pi~a~~~~~~i~~~~~~~~--~~~~~~~T~~-gnpl~~aaa~a~l~~l~~--~~l~~~~~~~g~~l~~~L~~-l~~~~~~ 350 (447)
T PRK06917 277 PIAATVVSDRVMEPILRGS--RSIMSGHTLS-ANPLSAATALAVLEYMEK--HNLPEKAAEKGEYLIKGLQK-VQQQSTI 350 (447)
T ss_pred ceEEEEEcHHHHHHHhccC--cccccccCCC-CCHHHHHHHHHHHHHHHH--CCHHHHHHHHHHHHHHHHHH-HHhcCCC
Confidence 5788888876544432210 0000111222 344556666678887765 35667778888888887776 32 1211
Q ss_pred eCCCCCCCCceEEEEecCC--------C----hHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEE
Q psy8850 283 NGDMNNRIPHNLNISFNFI--------E----GESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRF 348 (397)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~--------~----~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi 348 (397)
+.. -...+.++.+.|... . ...+...+. |+.+.+...-. . ...++.+|+
T Consensus 351 i~~-vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~---------------~-g~~~~~i~l 413 (447)
T PRK06917 351 IGD-VRGKGLLIGVEFVADKKTKQPFSKSQAVASELISVAAKNGLLLYPAVAGQ---------------D-GKEGDAVII 413 (447)
T ss_pred EEE-EeecceEEEEEEeccCCcCCCCcchhHHHHHHHHHHHhCCcEEEeccccc---------------C-CCCCCEEEE
Confidence 211 111244555665311 0 123333333 77765431100 0 001378999
Q ss_pred eeCCCCCHHHHHHHHHHHHHHHHHHH
Q psy8850 349 TIGRFTTEKEIDFTIKLLKMKVKKLR 374 (397)
Q Consensus 349 ~~~~~~~~~~i~~~~~~l~~~~~~~~ 374 (397)
+++..+|++|||+++++|.++++++.
T Consensus 414 ~Ppl~it~~eid~~~~~l~~~l~~~~ 439 (447)
T PRK06917 414 APPMTITYSELDELLSIFAKSVEEMM 439 (447)
T ss_pred ECCCcCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998873
No 351
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.81 E-value=5.8e-17 Score=157.70 Aligned_cols=313 Identities=16% Similarity=0.086 Sum_probs=203.3
Q ss_pred HHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCC-
Q psy8850 42 AIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN- 120 (397)
Q Consensus 42 ~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~- 120 (397)
.+.+.++.+|+.||++ ...++++|+|.++..++.+++ ++||+|++..++|.|...++.+. |+++++++...
T Consensus 196 ~i~eAe~~aA~~fgAd-~tyfvvNGTS~~n~av~~a~~----~~Gd~VLvdRN~HKSv~~aLils---ga~PVYl~P~~n 267 (713)
T PRK15399 196 PHLEAEEYIARTFGAE-QSYIVTNGTSTSNKIVGMYAA----PAGSTLLIDRNCHKSLAHLLMMS---DVVPIWLKPTRN 267 (713)
T ss_pred HHHHHHHHHHHHhCCC-cEEEEeCChHHHHHHHHHHhc----CCCCEEEeecccHHHHHHHHHHc---CCeeEEeccccc
Confidence 5778899999999998 368889999999999999988 89999999999999999988887 99999987652
Q ss_pred -C---CCCCH-----HHHHHHhcCC-----ceEEEEecccCcccccccHHHHHHHHHhcCcEE-EEecccccCc--cc--
Q psy8850 121 -N---GLITL-----SQLEEKICSD-----TILVSVMLVNNEIGVIQPILEIGELCRSKGVIF-HCDAAQAVGK--ID-- 181 (397)
Q Consensus 121 -~---~~~d~-----~~l~~~i~~~-----~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~l-ivD~a~~~~~--~~-- 181 (397)
. +.++. +.+++++.+. +++++++++ |.-|.+++++.|+++| |+.+ ++|+||+... .+
T Consensus 268 ~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~p-TYdGi~yd~~~I~~~~---g~~~ilvDEAhgah~~F~p~~ 343 (713)
T PRK15399 268 ALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNS-TYDGLLYNTDWIKQTL---DVPSIHFDSAWVPYTHFHPIY 343 (713)
T ss_pred ccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECC-CCCceeeCHHHHHHHh---CCCEEEEeccchhhhhcCccc
Confidence 2 34566 8888888643 357888877 5569999999999999 7776 6999998322 11
Q ss_pred cccCcc----cccEE---Eecccc-ccCCCCceEEEEecCCC-CccccccccCCccccccCCCCchhHHHHHHHHHHHHH
Q psy8850 182 INIQNY----KVDLM---SFSAHK-IYGPKGIGALYIRRNPR-TRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLAR 252 (397)
Q Consensus 182 ~~~~~~----~~d~~---~~s~~K-~~g~~g~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~ 252 (397)
.+...+ ++|.+ +.|.|| +.+....+++.++.... +++...+ .-+.+++|+++.++++..+..++.
T Consensus 344 ~~~sam~~~~~aD~~i~~tQStHKtL~alTQaS~iHvk~~vd~~~~n~a~------~m~~STSPsY~LmASLD~a~~~m~ 417 (713)
T PRK15399 344 QGKSGMSGERVPGKVIFETQSTHKMLAAFSQASLIHIKGEYDEETFNEAF------MMHTSTSPSYPIVASVETAAAMLR 417 (713)
T ss_pred CCcChhhCCCCCCeeeeeeeehhccccccchheeeeecCCCCHHHHHHHH------HHHcCCCcHHHHHHHHHHHHHHHH
Confidence 111111 45766 999999 77777789998865321 1122211 113456788888888888888876
Q ss_pred H-HHHHHHHHHHHHHHHHHHHHhhhcCc------EEEeCCCCCCCCceE-------EEEecCCChHH-HHHHhCCcEe-c
Q psy8850 253 I-EMKEELKRILFLQKRLYNGLMESIEE------IYINGDMNNRIPHNL-------NISFNFIEGES-LLMAIKDIAV-S 316 (397)
Q Consensus 253 ~-~~~~~~~~~~~~~~~l~~~l~~~~~~------~~~~~~~~~~~~~~~-------~~~~~~~~~~~-~~~~l~~i~~-~ 316 (397)
. .-..+.+...+.+..+++.|.+ +.+ +.++.++......++ +-.|.+..... ..+.++ +.+ .
T Consensus 418 ~~~G~~l~~~~i~~a~~fR~~l~~-~~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf~~~~~~~~~lDP~K-ltI~t 495 (713)
T PRK15399 418 GNPGKRLINRSVERALHFRKEVQR-LREESDGWFFDIWQPENVDEAECWPVAPGEQWHGFKDADADHMFLDPVK-VTILT 495 (713)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHh-ccccccCceeeecCccccCCccceecCCCcccccccccccccccCCCce-EEEEe
Confidence 3 4566777888888888888877 554 344432100000000 00011100000 011111 111 1
Q ss_pred ccCc-----cCCCC--CChhhHHHhhCCCcccc-CceEEEeeCCCCCHHHHHHHHHHHHHHHHHHH
Q psy8850 317 SGSA-----CTSAS--LEPSYVLRALGCNDELA-HSSIRFTIGRFTTEKEIDFTIKLLKMKVKKLR 374 (397)
Q Consensus 317 ~g~~-----~~~~~--~~~~~~~~~~g~~~~~~-~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 374 (397)
+|.. -..|. ..-...|+..|+..... ...+-+-++...+++++++++++|.++-+.+.
T Consensus 496 ~g~~~~g~~~~~Gi~g~~l~~~L~e~gI~~E~~d~~~vL~l~s~g~t~~~~~~L~~aL~~f~~~~d 561 (713)
T PRK15399 496 PGMDEQGNMSEEGIPAALVAKFLDERGIVVEKTGPYNLLFLFSIGIDKTKAMGLLRGLTEFKRAYD 561 (713)
T ss_pred cCcccccccccCCCCHHHHHHHHHHcCCEEEecCCCeEEEEeCCCCCHHHHHHHHHHHHHHHHhhh
Confidence 1110 00000 00123455556555443 35677777777899999999999998855443
No 352
>PRK06148 hypothetical protein; Provisional
Probab=99.81 E-value=1.8e-17 Score=171.23 Aligned_cols=327 Identities=15% Similarity=0.150 Sum_probs=202.7
Q ss_pred CCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccC
Q psy8850 6 TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKR 85 (397)
Q Consensus 6 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~ 85 (397)
.+..+|.|.+++.+++.... ... . ...+...++.+.|++.+..+.+.++|++|||+|++.+++.. +.++++
T Consensus 636 lGH~hp~v~~Ai~~q~~~l~--~~~-~-----~~~~~~~~lAe~L~~~~p~~~~~v~f~nSGsEA~e~AlklA-r~~tGr 706 (1013)
T PRK06148 636 VGHAHPRVVAAAARQAARLN--TNT-R-----YLHDAIVAYAERLTATLPDGLTVAFFVNSGSEANSLALRLA-RAHTGQ 706 (1013)
T ss_pred cCCCCHHHHHHHHHHHhhcC--CcC-C-----cCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHH-HHhcCC
Confidence 45678999999999997631 111 1 12345677888888887544457999999999999999954 445444
Q ss_pred CCEEEEcCCCChhhH-HHHHHHh----h-CC----cEEEEeccCC--CCCC---C-------HHHHHHHhc------CCc
Q psy8850 86 GKHIITVQTEHKSVL-DSIRKLE----N-DG----FRVTYLKPKN--NGLI---T-------LSQLEEKIC------SDT 137 (397)
Q Consensus 86 g~~vl~~~~~~~s~~-~~~~~~~----~-~g----~~v~~v~~~~--~~~~---d-------~~~l~~~i~------~~~ 137 (397)
.+|++...+|++.. .+..... . .+ ..+..++... .... + .+++++.+. +++
T Consensus 707 -~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~i 785 (1013)
T PRK06148 707 -RDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMAAKGRGP 785 (1013)
T ss_pred -CeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhhccCCce
Confidence 45665555555544 3332110 0 01 1122222111 0001 1 134555543 458
Q ss_pred eEEEEecccCccccccc----HHHHHHHHHhcCcEEEEecccc-cCccc-----cccCcccccEEEecccc-ccCCCCce
Q psy8850 138 ILVSVMLVNNEIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKID-----INIQNYKVDLMSFSAHK-IYGPKGIG 206 (397)
Q Consensus 138 ~~v~~~~~~~~tG~~~~----l~~i~~l~~~~gi~livD~a~~-~~~~~-----~~~~~~~~d~~~~s~~K-~~g~~g~g 206 (397)
.+|+++.+....|.+.| ++++.++|++||+++|+|+++. +|..- .......+|+++++ | +.|+..+|
T Consensus 786 AAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDivt~g--K~lggG~Plg 863 (1013)
T PRK06148 786 AFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDIVTMG--KPIGNGHPMG 863 (1013)
T ss_pred EEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCCCcceeeec--ccccCCcceE
Confidence 89999999988898877 7999999999999999999985 43321 22233468998887 9 66656689
Q ss_pred EEEEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCC
Q psy8850 207 ALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDM 286 (397)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 286 (397)
.++++++..+.+.+-. ....+.+. |...+++..++|+.+.+ +++.++..++.++|++.|++......++..-
T Consensus 864 av~~~~ei~~~~~~g~-----~~~~Tf~g-npla~aaa~a~L~~i~~--e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~V 935 (1013)
T PRK06148 864 AVVTTREIADSFDNGM-----EYFNTFGG-NPVSCAIGLAVLDIIED--EDLQRNALEIGNYLLAGLRELQDRFDIIGDV 935 (1013)
T ss_pred EEEEcHHHHhhccCCC-----ccccCCCC-CHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHHhCCCceEE
Confidence 9999877655443211 01123333 44455555578888765 4567778888888888887621111111110
Q ss_pred CCCCCceEEEEecCC-----C----hHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCC
Q psy8850 287 NNRIPHNLNISFNFI-----E----GESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTT 355 (397)
Q Consensus 287 ~~~~~~~~~~~~~~~-----~----~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~ 355 (397)
...+.++-+.+... . ...+...+. ||.+.+.. ..++.+||.++..+|
T Consensus 936 -rG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g---------------------~~~~vlr~~Ppl~it 993 (1013)
T PRK06148 936 -RGMGLFLGIELVTDRKTKAPATAIARYVKNGARERGILIGTEG---------------------PHDNVLKIRPPLIFS 993 (1013)
T ss_pred -eeeceEEEEEecCCccccCccHHHHHHHHHHHHhCCeEEeccC---------------------CCCCEEEEeCCccCC
Confidence 11144555555321 1 123444443 77665321 013889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q psy8850 356 EKEIDFTIKLLKMKVKKLR 374 (397)
Q Consensus 356 ~~~i~~~~~~l~~~~~~~~ 374 (397)
++++|+++++|.+++.++.
T Consensus 994 ~~~id~~l~~l~~~l~~~~ 1012 (1013)
T PRK06148 994 RADADHLLEVLDDVLAAAL 1012 (1013)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999999999997653
No 353
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.81 E-value=2.5e-17 Score=156.59 Aligned_cols=312 Identities=14% Similarity=0.109 Sum_probs=191.0
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCC
Q psy8850 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRG 86 (397)
Q Consensus 7 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g 86 (397)
+..+|.|.+++.+++.... . +.. ..+...++.+.|++.+.. .+.+.|++|||+|++.+++.. +.+++ +
T Consensus 114 Gh~~p~v~~av~~ql~~~~---~---~~~---~~~~~~~lAe~l~~~~p~-~~~v~f~~SGsEA~e~AlklA-R~~tg-r 181 (474)
T PLN02482 114 GHADDEVLAALAETMKKGT---S---FGA---PCLLENVLAEMVIDAVPS-VEMVRFVNSGTEACMGVLRLA-RAYTG-R 181 (474)
T ss_pred CCCCHHHHHHHHHHHhhCC---C---CCC---CCHHHHHHHHHHHHhCCC-CCEEEEeCChHHHHHHHHHHH-HHhcC-C
Confidence 4568999999999997622 1 111 123456677888887753 468999999999999999954 44544 4
Q ss_pred CEEEEcCCCChhhHHHHHHHhhC-----------Cc------EEEEeccCCCCCCCHHHHHHHhc---CCceEEEEeccc
Q psy8850 87 KHIITVQTEHKSVLDSIRKLEND-----------GF------RVTYLKPKNNGLITLSQLEEKIC---SDTILVSVMLVN 146 (397)
Q Consensus 87 ~~vl~~~~~~~s~~~~~~~~~~~-----------g~------~v~~v~~~~~~~~d~~~l~~~i~---~~~~~v~~~~~~ 146 (397)
++|+....+|++....+...... |. .+..+|.+ |++++++.+. +++.+|+++.+.
T Consensus 182 ~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~n-----d~~~l~~~l~~~~~~iAavI~Epv~ 256 (474)
T PLN02482 182 EKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPYN-----DLEAVKKLFEANKGEIAAVILEPVV 256 (474)
T ss_pred CEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecCC-----ChHHHHHHHHhCCCceEEEEECCCC
Confidence 67777777777654222111000 11 11222222 7889998885 357899999999
Q ss_pred Cccccccc----HHHHHHHHHhcCcEEEEecccccCccc----cccCcccccEEEecccc-ccCCCCceEEEEecCCCCc
Q psy8850 147 NEIGVIQP----ILEIGELCRSKGVIFHCDAAQAVGKID----INIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTR 217 (397)
Q Consensus 147 ~~tG~~~~----l~~i~~l~~~~gi~livD~a~~~~~~~----~~~~~~~~d~~~~s~~K-~~g~~g~g~~~~~~~~~~~ 217 (397)
...|.+.| ++.+.++|++||+++|+|+++...... .......+|+++++ | +.|+..+|.+.++++..+.
T Consensus 257 g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGfR~g~~ga~~~~gv~PDi~t~g--K~lggG~Pigav~g~~ei~~~ 334 (474)
T PLN02482 257 GNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGFRIAYGGAQEYFGITPDLTTLG--KVIGGGLPVGAYGGRREIMEM 334 (474)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCeecCcchHhHHhCCCCCEEEec--chhhCCCceEEEEEcHHHHHh
Confidence 88898877 578999999999999999998521111 11122358887776 9 6554457888888766555
Q ss_pred cccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCc--EEEe-CCCCCCCCceE
Q psy8850 218 IEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEE--IYIN-GDMNNRIPHNL 294 (397)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~~-~~~~~~~~~~~ 294 (397)
+.+. +......+.+ .+...+++..++|+.+.+ +...+++.++.++|++.|++.... +.+. ... ..++
T Consensus 335 ~~~~---~~~~~~~T~~-gnpl~~aAala~L~~l~~--~~~~~~~~~~g~~l~~~L~~l~~~~g~~~~~~~v----~g~~ 404 (474)
T PLN02482 335 VAPA---GPMYQAGTLS-GNPLAMTAGIHTLKRLQQ--PGTYEYLDKITKKLIQGILEAGKKAGHEMCGGYI----SGMF 404 (474)
T ss_pred hccC---CCcccccCcc-hhHHHHHHHHHHHHHHhc--cCHHHHHHHHHHHHHHHHHHHHHhcCCCEEEccc----ceEE
Confidence 4321 1000111111 244455556678887764 457778888888888888762111 2222 111 2344
Q ss_pred EEEecCC-----------Ch---HHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHH
Q psy8850 295 NISFNFI-----------EG---ESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKE 358 (397)
Q Consensus 295 ~~~~~~~-----------~~---~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~ 358 (397)
.+.|... +. ..+...+. |+.+.+... + . + .++..+|++|
T Consensus 405 gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l~~~Gv~~~~~~~--~--------------------~--~-~psl~ht~~d 459 (474)
T PLN02482 405 GFFFTEGPVYNFADAKKSDTAKFARFHRGMLEEGVYLAPSQF--E--------------------A--G-FTSLAHTEED 459 (474)
T ss_pred EEEEecCCccChhhhccCCHHHHHHHHHHHHHCCeEEeccCC--C--------------------C--C-cCCCCCCHHH
Confidence 4444311 11 12333332 666654210 0 1 1 1556689999
Q ss_pred HHHHHHHHHHHHHH
Q psy8850 359 IDFTIKLLKMKVKK 372 (397)
Q Consensus 359 i~~~~~~l~~~~~~ 372 (397)
||++++++.+++++
T Consensus 460 Id~~l~al~~~l~~ 473 (474)
T PLN02482 460 IDFTIAAAERVLAR 473 (474)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999865
No 354
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.80 E-value=8e-17 Score=160.73 Aligned_cols=288 Identities=13% Similarity=0.113 Sum_probs=211.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHH-hhCCcEEEEecc
Q psy8850 40 EKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKL-ENDGFRVTYLKP 118 (397)
Q Consensus 40 ~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~-~~~g~~v~~v~~ 118 (397)
-+.+.+++..++++.|.+..+..+..++|.+.++++++..... +++++|++++..||.+...++.. ...|++++.++
T Consensus 108 Le~l~e~Qt~i~eLtGm~~aNaSl~d~atA~aEa~~~a~~~~~-~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~- 185 (939)
T TIGR00461 108 LEALLNFQTVVSDLTGLPVANASLLDEGTAAAEAMALSFNVSK-KKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVD- 185 (939)
T ss_pred HHHHHHHHHHHHHHHCCChhhhhccchhhHHHHHHHHHHHhhc-CCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEEc-
Confidence 3677789999999999998889999999999888877653211 33589999999999999888844 34499988874
Q ss_pred CCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCccccccCcccccEEEecccc
Q psy8850 119 KNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHK 198 (397)
Q Consensus 119 ~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~~s~~K 198 (397)
+++|++.+ ++.++++.+| |-.|.+.++++|.+++|++|.+++++.-...........++++|+++.+.++
T Consensus 186 -------~~~l~~~~--~~~~v~~q~P-n~~G~ied~~~i~~~~h~~gal~~~~ad~~al~ll~~Pge~GaDi~vg~~q~ 255 (939)
T TIGR00461 186 -------CSDIKKAV--DVFGCLLQYP-ATDGSILDYKQLIDALHSHKSLVSVAADLMALTLLTPPGHYGADIVLGSSQR 255 (939)
T ss_pred -------HHHHhhcC--CEEEEEEECC-CCCeEEecHHHHHHHHHHcCCEEEEEechHHhCCcCCHHHcCCcEEeeCCCc
Confidence 44566655 5677777766 4569999999999999999999999766655555556677799999988888
Q ss_pred c-----cCCCCceEEEEecCCCCccccccccC-----------------CccccccCCCCchhHH---HHHHHH--HHHH
Q psy8850 199 I-----YGPKGIGALYIRRNPRTRIEAQIHGG-----------------GHEYGLRSGTLATHQI---VGMGEA--FRLA 251 (397)
Q Consensus 199 ~-----~g~~g~g~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~---~~l~~a--l~~~ 251 (397)
+ +|+++.|++.++++....+...+.|. .+..+...+++|.... .++.++ +.++
T Consensus 256 fg~p~g~GGP~aG~~a~~~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~~ 335 (939)
T TIGR00461 256 FGVPMGYGGPHAAFFAVKDEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNICTAQVLLANVASSYCVYH 335 (939)
T ss_pred cCCCCCCCCCceeeeeecHhhHhhCCCCceeEEecCCCCccceeecccccccccccccCcchhHHHHHHHHHHHHHHHHH
Confidence 5 33445899999987666654433331 1123444567665433 333334 2332
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCChHHHHHHhC--CcEecccCccCCCCCCh
Q psy8850 252 -RIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAIK--DIAVSSGSACTSASLEP 328 (397)
Q Consensus 252 -~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~i~~~~g~~~~~~~~~~ 328 (397)
.+|++++.++...++.++.+.|++ .|+.+..+ .....+.+.++..+..++.+.+. ||.+...
T Consensus 336 G~~GL~~iA~~~~~~a~~l~~~L~~--~G~~~~~~---~fF~~~~v~~~~~~~~~i~~~~~~~gi~l~~~---------- 400 (939)
T TIGR00461 336 GPKGLKNIARRIHSLTSILANGLEN--DPHELINK---TWFDTLTVKVGNGISSELLKAAEEFNINLRAV---------- 400 (939)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHh--CCCcccCC---CccceEEEEeCCCCHHHHHHHHHHCCCeeeec----------
Confidence 468999999999999999999998 78877754 22345566664345677777775 7765431
Q ss_pred hhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHH
Q psy8850 329 SYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLK 367 (397)
Q Consensus 329 ~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~ 367 (397)
..+.+++|+..++|.+||+.+++.+.
T Consensus 401 -------------~~~~i~~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 401 -------------DTTTVGIALDETTTKADVENLLKVFD 426 (939)
T ss_pred -------------CCCEEEEEeecCCCHHHHHHHHHHhc
Confidence 12689999999999999999999995
No 355
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.80 E-value=5e-17 Score=153.76 Aligned_cols=328 Identities=10% Similarity=0.054 Sum_probs=199.5
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhcc--
Q psy8850 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKK-- 84 (397)
Q Consensus 7 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~-- 84 (397)
+..+|++.+++++++.... .... . ....+...++.+.++++++..-+.+.|+++|++|++.+++....++..
T Consensus 60 Gh~~p~v~~ai~~~~~~~~-~~~~-~----~~~~~~~~~la~~l~~~~~~~~~~v~f~~sGseA~e~AlklAr~~~~~~~ 133 (427)
T TIGR00508 60 GYNHPRLNAAAQKQIDKMS-HVMF-G----GFTHKPAIELCQKLVKMTPNALDCVFLADSGSVAVEVALKMALQYWQAKG 133 (427)
T ss_pred CCCCHHHHHHHHHHHHhcC-Cccc-c----ccCCHHHHHHHHHHHhhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhhC
Confidence 4678999999999987622 1111 0 011234566777888887644468999999999999999965543311
Q ss_pred --CCCEEEEcCCCChhhHHHHHHHhhC---------C--cEEEEeccCCC-C-----CCCHHHHHHHhc---CCceEEEE
Q psy8850 85 --RGKHIITVQTEHKSVLDSIRKLEND---------G--FRVTYLKPKNN-G-----LITLSQLEEKIC---SDTILVSV 142 (397)
Q Consensus 85 --~g~~vl~~~~~~~s~~~~~~~~~~~---------g--~~v~~v~~~~~-~-----~~d~~~l~~~i~---~~~~~v~~ 142 (397)
.+.+|+....+|++.......+... + ..+..++.... . .-|++++++++. ++..+|++
T Consensus 134 ~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l~~~~~~vaaviv 213 (427)
T TIGR00508 134 EKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQNRFDEEWNEEAITPLAKLMELHSDEIAAVIL 213 (427)
T ss_pred CCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCCCccccchhHHHHHHHHHHHHHhcCCcEEEEEE
Confidence 2356777777666654333222110 0 01112222111 0 114567777774 35778899
Q ss_pred ecc-cCccccccc----HHHHHHHHHhcCcEEEEecccc-cCcc----ccccCcccccEEEecccc-ccCC-CCceEEEE
Q psy8850 143 MLV-NNEIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKI----DINIQNYKVDLMSFSAHK-IYGP-KGIGALYI 210 (397)
Q Consensus 143 ~~~-~~~tG~~~~----l~~i~~l~~~~gi~livD~a~~-~~~~----~~~~~~~~~d~~~~s~~K-~~g~-~g~g~~~~ 210 (397)
+.+ ++..|.+.+ +++|.++|++||+++|+|+++. +|.. ..+...+.+|++++ +| +.|+ ..++.++.
T Consensus 214 EPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~~~~~~~v~pDi~~~--gK~l~gG~~p~~a~~~ 291 (427)
T TIGR00508 214 EPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLFACEHAGVVPDILCV--GKALTGGYMTLSATVT 291 (427)
T ss_pred echhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccchhhhcCCCCCEEEe--chhhhcCcccceEEEE
Confidence 986 677676544 7899999999999999999984 2221 11222346888886 59 5443 24677888
Q ss_pred ecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCC
Q psy8850 211 RRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRI 290 (397)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~ 290 (397)
+++..+.+.....+. ....... ..+...+++..++++.+.+ ..+.++..++.++|++.|++ +........ ....
T Consensus 292 ~~~~~~~~~~~~~~~-~~~~~T~-~g~p~~~aaa~a~l~~l~~--~~~~~~~~~~~~~l~~~L~~-l~~~~~i~~-vrg~ 365 (427)
T TIGR00508 292 TDKVAQTISSGEAGC-FMHGPTF-MGNPLACAVAEASLAILLE--GEWQKQVSAIENQLKRELSP-LRKNPVVKD-VRVL 365 (427)
T ss_pred cHHHHHHHhcCCCCc-cccCCCC-CcCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHH-hhcCCCEEe-Eecc
Confidence 765544443211000 0000111 2345666666688887765 34578888888899988877 532211111 1112
Q ss_pred CceEEEEecC-CChHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHH
Q psy8850 291 PHNLNISFNF-IEGESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLK 367 (397)
Q Consensus 291 ~~~~~~~~~~-~~~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~ 367 (397)
+.++.+.+.. .....+...+. ||.+.+. ++.+|++++..++++|||+++++|+
T Consensus 366 G~~~~i~~~~~~~~~~~~~~l~~~Gv~~~~~------------------------~~~l~~~ppl~~t~~~id~~~~~l~ 421 (427)
T TIGR00508 366 GAIGVVEMYKPVNVEELQKKFVEQGVWIRPF------------------------GKLIYVMPPYIITTEQLQKLTAALI 421 (427)
T ss_pred ccEEEEEECCccCHHHHHHHHHHCCeEEEec------------------------CCEEEEECCCCCCHHHHHHHHHHHH
Confidence 4556666643 23455666654 6666431 1579999999999999999999999
Q ss_pred HHHHH
Q psy8850 368 MKVKK 372 (397)
Q Consensus 368 ~~~~~ 372 (397)
+++++
T Consensus 422 ~~l~~ 426 (427)
T TIGR00508 422 EALHE 426 (427)
T ss_pred HHHhc
Confidence 98854
No 356
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.80 E-value=1.3e-16 Score=151.93 Aligned_cols=326 Identities=13% Similarity=0.077 Sum_probs=194.2
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCC-C-c-EEEeCChhHHHHHHHHHhHhhhc
Q psy8850 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADP-R-E-IIWTSGATESNNLAIKGAAHFYK 83 (397)
Q Consensus 7 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~-~-~-i~~~~g~t~a~~~~l~~l~~~~~ 83 (397)
+..+|+|.+++++++..... .+. .....+...++.+.|++.++... + . +++++||++|++.+++... .++
T Consensus 73 GH~~p~v~~Ai~~q~~~~~~-----~~~-~~~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGsEAve~AlklAr-~~t 145 (459)
T PRK06931 73 GHNHPDVLQSIQDVLTSGLP-----LHT-LDLTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGADAVEAAIKLAK-TYT 145 (459)
T ss_pred CCCCHHHHHHHHHHHhhhcc-----ccc-cccCCHHHHHHHHHHHHhCCCccccceEEEeCCCcHHHHHHHHHHHH-Hhc
Confidence 46789999999999864110 000 01123455677888888775321 1 2 4566899999999999544 443
Q ss_pred cCCCEEEEcCCCChhhHHHHHHHh-hC---------CcEEEEeccCCCCC--C------CHHHH----HHHhc------C
Q psy8850 84 KRGKHIITVQTEHKSVLDSIRKLE-ND---------GFRVTYLKPKNNGL--I------TLSQL----EEKIC------S 135 (397)
Q Consensus 84 ~~g~~vl~~~~~~~s~~~~~~~~~-~~---------g~~v~~v~~~~~~~--~------d~~~l----~~~i~------~ 135 (397)
+ +++|+....+|++.......+. .. ...+..+|.+.... . +.+.+ ++.+. +
T Consensus 146 g-r~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (459)
T PRK06931 146 G-RSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFENFIEDVESGVR 224 (459)
T ss_pred C-CCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhhcCCC
Confidence 4 4567766666666654433321 10 01233444432110 0 12222 33332 2
Q ss_pred CceEEEEecccCccccccc----HHHHHHHHHhcCcEEEEecccc-cCcc----ccccCcccccEEEecccc-ccCCCCc
Q psy8850 136 DTILVSVMLVNNEIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKI----DINIQNYKVDLMSFSAHK-IYGPKGI 205 (397)
Q Consensus 136 ~~~~v~~~~~~~~tG~~~~----l~~i~~l~~~~gi~livD~a~~-~~~~----~~~~~~~~~d~~~~s~~K-~~g~~g~ 205 (397)
++.+|+++.++...|.+.| ++.+.++|++||+++|+|+++. +|.. ........+|+++++ | +.|+..+
T Consensus 225 ~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a~~~~gv~PDivt~g--K~l~gG~Pi 302 (459)
T PRK06931 225 KPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKMFAFEHAGIEPDIIVMS--KAVGGGLPL 302 (459)
T ss_pred ceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchHHHhhhcCCCCCEEEec--ccccCCcce
Confidence 4789999999988888766 7899999999999999999986 3322 112233468999987 9 6555557
Q ss_pred eEEEEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CcEEEeC
Q psy8850 206 GALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESI-EEIYING 284 (397)
Q Consensus 206 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~ 284 (397)
|++..+++. +.+.+.. ...+.+. |...+++..++|+.+.+ ..+.++..++.++|++.|++ + ....++.
T Consensus 303 ~av~~~~~~-~~~~~~~------~~~T~~g-npla~aaala~L~~l~~--~~l~~~~~~~G~~l~~~L~~-l~~~~~~i~ 371 (459)
T PRK06931 303 AVLGIKKEF-DAWQPGG------HTGTFRG-NQLAMATGLTTLKILKE--ENLAQNAAERGEWLKAQLAE-LQKRYPCIG 371 (459)
T ss_pred eeeeeHHHH-hhccCCC------CCCCCCC-CHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHH-HHHhCCCeE
Confidence 888777542 3332211 1122233 34445555578887765 34667777777777777766 3 1111121
Q ss_pred CCCCCCCceEEEEecCCC---------------hHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEE
Q psy8850 285 DMNNRIPHNLNISFNFIE---------------GESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIR 347 (397)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~---------------~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iR 347 (397)
. -...+.++.+.+.... ...+...+. |+.+.+.. ..++.+|
T Consensus 372 ~-vrG~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~---------------------~~~~~l~ 429 (459)
T PRK06931 372 N-VRGRGLMIGIEIVDERQPADAMGSYPADGELAAAIQKACFENGLLLERGG---------------------RNGNVVR 429 (459)
T ss_pred e-EecCceEEEEEEccCcccccccccCCccHHHHHHHHHHHHHCCcEEeecC---------------------CCCCEEE
Confidence 1 1112445555553210 112333332 66664321 0137899
Q ss_pred EeeCCCCCHHHHHHHHHHHHHHHHHHHh
Q psy8850 348 FTIGRFTTEKEIDFTIKLLKMKVKKLRE 375 (397)
Q Consensus 348 i~~~~~~~~~~i~~~~~~l~~~~~~~~~ 375 (397)
+.++..++++|+|+++++|.+++.++-+
T Consensus 430 ~~Ppl~it~~eid~~~~~l~~~l~~~~~ 457 (459)
T PRK06931 430 LLPPLLITQAECEEFIDRFEQALLAAVK 457 (459)
T ss_pred EECCCCcCHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999977543
No 357
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.80 E-value=7.2e-17 Score=153.11 Aligned_cols=313 Identities=18% Similarity=0.172 Sum_probs=192.1
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCC
Q psy8850 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRG 86 (397)
Q Consensus 7 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g 86 (397)
+..+|.+.+++.+++.... .. + ...+...++.+.|++++. ..+.+++++||++|++.+++..... ..+
T Consensus 65 Gh~~p~i~~a~~~~~~~~~---~~--~----~~~~~~~~la~~L~~~~~-~~~~v~~~~sGseA~e~Aik~a~~~--~g~ 132 (426)
T PRK00062 65 GHAHPEVVEAVIEAAEKGL---SF--G----APTELEVELAELVIELVP-SIEMVRMVNSGTEATMSAIRLARGY--TGR 132 (426)
T ss_pred CCCCHHHHHHHHHHHHhCC---cC--C----CCCHHHHHHHHHHHHhCC-CCCEEEEecCHHHHHHHHHHHHHHH--hCC
Confidence 4678999999999997621 11 1 113455678888888764 2357999999999999999975532 235
Q ss_pred CEEEEcCCCChhhHHHHHHHhhC-----------CcE------EEEeccCCCCCCCHHHHHHHhc---CCceEEEEeccc
Q psy8850 87 KHIITVQTEHKSVLDSIRKLEND-----------GFR------VTYLKPKNNGLITLSQLEEKIC---SDTILVSVMLVN 146 (397)
Q Consensus 87 ~~vl~~~~~~~s~~~~~~~~~~~-----------g~~------v~~v~~~~~~~~d~~~l~~~i~---~~~~~v~~~~~~ 146 (397)
++|+..+++|++........... +.. ...++ ..|++++++.+. +++++|+++...
T Consensus 133 ~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~~l~~~i~~~~~~~aaiivEpv~ 207 (426)
T PRK00062 133 DKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAP-----YNDLEAVEELFEEYGDEIAAVIVEPVA 207 (426)
T ss_pred CeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcC-----CCCHHHHHHHHHhCCCcEEEEEEeCCc
Confidence 78888888888876433322100 110 11111 127889998885 367899999888
Q ss_pred Cccccccc----HHHHHHHHHhcCcEEEEecccccCcc----ccccCcccccEEEecccc-ccCCCCceEEEEecCCCCc
Q psy8850 147 NEIGVIQP----ILEIGELCRSKGVIFHCDAAQAVGKI----DINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTR 217 (397)
Q Consensus 147 ~~tG~~~~----l~~i~~l~~~~gi~livD~a~~~~~~----~~~~~~~~~d~~~~s~~K-~~g~~g~g~~~~~~~~~~~ 217 (397)
+.+|.+.| +++|.++|++||+++|+|++|..... ..+.....+|++ +++| +.++..+|+++++++..+.
T Consensus 208 ~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g~~~~~~~~~~~pDi~--~~gK~l~~G~p~ga~~~~~~i~~~ 285 (426)
T PRK00062 208 GNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVALGGAQGYYGVTPDLT--TLGKIIGGGLPVGAFGGRREIMEQ 285 (426)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccCCccHHHHhCCCcchH--hhhhHhhCCCcceeeeEHHHHHHh
Confidence 88999988 89999999999999999999972211 111112246765 4559 5443336888888765555
Q ss_pred cccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---cCcEEEeCCCCCCCCceE
Q psy8850 218 IEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMES---IEEIYINGDMNNRIPHNL 294 (397)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~~~~~~~~~~~~ 294 (397)
+.... .. ..+.....+...+++..++++.+.+. ++.++..++.+++++.|++. .+ +..... ..+.++
T Consensus 286 ~~~~~---~~-~~~~T~~~~p~~~aaa~a~L~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~vr---g~G~~~ 355 (426)
T PRK00062 286 LAPLG---PV-YQAGTLSGNPLAMAAGLATLKLLKEP--GFYEELEALTKRLAEGLKEAAKKAG-IPLTVN---RVGSMF 355 (426)
T ss_pred hccCC---Cc-eecccCcCCHHHHHHHHHHHHHHhcc--hHHHHHHHHHHHHHHHHHHHHHHcC-CceEEE---EecceE
Confidence 43210 00 11111134455566666888877653 45566666666666666541 22 211111 114455
Q ss_pred EEEecCC-----------C---hHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHH
Q psy8850 295 NISFNFI-----------E---GESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKE 358 (397)
Q Consensus 295 ~~~~~~~-----------~---~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~ 358 (397)
.+.+... + ...+...+. |+.+.+.. .+.++++ ..++++|
T Consensus 356 ~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~~Gv~v~~~~-----------------------~~~~~~~--~~~t~~e 410 (426)
T PRK00062 356 GLFFTDEPVTNYADAKKSDTERFARFFHAMLDEGVYLAPSQ-----------------------FEAGFVS--AAHTDED 410 (426)
T ss_pred EEEEecCCCcchhhhccccHHHHHHHHHHHHHCCeEeecCC-----------------------cCceeee--ccCCHHH
Confidence 5555321 0 124444443 66664421 1345665 4579999
Q ss_pred HHHHHHHHHHHHHHH
Q psy8850 359 IDFTIKLLKMKVKKL 373 (397)
Q Consensus 359 i~~~~~~l~~~~~~~ 373 (397)
+++++++|.++++++
T Consensus 411 i~~~~~~l~~~l~~~ 425 (426)
T PRK00062 411 IEKTLEAARKAFAAL 425 (426)
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999998754
No 358
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.79 E-value=1.2e-16 Score=150.82 Aligned_cols=321 Identities=13% Similarity=0.099 Sum_probs=190.9
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCC
Q psy8850 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRG 86 (397)
Q Consensus 7 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g 86 (397)
+..+|.|.+++.+++.... .+. ...+...++.+.|.++++...+.+.|++||++|++.+++... .+++ +
T Consensus 68 Gh~~p~v~~ai~~q~~~~~------~~~---~~~~~~~~la~~L~~~~~~~~~~v~f~~SGsEA~e~AiklAr-~~tg-r 136 (433)
T PRK00615 68 GHSHPKICDAIQQGAERGT------SYG---LTSEQEILFAEELFSYLGLEDHKIRFVSSGTEATMTAVRLAR-GITG-R 136 (433)
T ss_pred CCCCHHHHHHHHHHHHhCC------CCC---CCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHH-HhhC-C
Confidence 4678999999999987621 111 112345677888888876444579999999999999999544 4433 4
Q ss_pred CEEEEcCCCChhhHHH-HHHHhhCCc---EE-EEe--c-cCCC----CCCCHHHHHHHhc---CCceEEEEecccCcccc
Q psy8850 87 KHIITVQTEHKSVLDS-IRKLENDGF---RV-TYL--K-PKNN----GLITLSQLEEKIC---SDTILVSVMLVNNEIGV 151 (397)
Q Consensus 87 ~~vl~~~~~~~s~~~~-~~~~~~~g~---~v-~~v--~-~~~~----~~~d~~~l~~~i~---~~~~~v~~~~~~~~tG~ 151 (397)
.+|+....+|++.... +..+...+. .. ... + .... -.-|++++++.+. +++.+|+++.+....|.
T Consensus 137 ~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavI~Epv~~~~G~ 216 (433)
T PRK00615 137 SIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLGHRVAGVIFEPICANMGV 216 (433)
T ss_pred CEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcCCceEEEEECCCCCCCCc
Confidence 6777767666664311 111100010 00 000 0 0000 0126888988875 35789999999988898
Q ss_pred ccc----HHHHHHHHHhcCcEEEEecccc-c--Ccc-ccccCcccccEEEecccc-ccCCCCceEEEEecCCCCcccccc
Q psy8850 152 IQP----ILEIGELCRSKGVIFHCDAAQA-V--GKI-DINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEAQI 222 (397)
Q Consensus 152 ~~~----l~~i~~l~~~~gi~livD~a~~-~--~~~-~~~~~~~~~d~~~~s~~K-~~g~~g~g~~~~~~~~~~~~~~~~ 222 (397)
+.| +++|.++|++||+++|+|+++. + |.. ........+|+++++ | +.|+..+|+++++++..+.+.+.
T Consensus 217 ~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~R~G~~ga~~~~gv~PDi~~~g--K~lggG~p~~av~~~~~i~~~~~~~- 293 (433)
T PRK00615 217 VLPKPGFIEGIIQTCRRTGSLSIMDEVVTGFRVAQGGAAAIYHVKPDITVYG--KILGGGLPAAAVVAHKSIMDHLAPE- 293 (433)
T ss_pred ccCCHHHHHHHHHHHHHcCCEEEEEcccccccccHhHHHHhcCCCCCeEEEc--ccccCCcceeeeeecHHHHhhhcCC-
Confidence 887 4699999999999999999985 2 111 112223368988765 9 55443478988887765555321
Q ss_pred ccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc--CcEEEeCCCCCCCCceEEEEecC
Q psy8850 223 HGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESI--EEIYINGDMNNRIPHNLNISFNF 300 (397)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 300 (397)
+......+. ..+...+++..++++.+.+ ..+.+++.++.++|.+.|++.+ .++.+... +.+.++.+.|..
T Consensus 294 --~~~~~~~T~-~g~p~~~aa~la~L~~i~~--~~~~~~~~~~g~~l~~~l~~~~~~~g~~v~~~---r~G~~~~i~~~~ 365 (433)
T PRK00615 294 --GTIFQAGTL-SGNPLAMAAGKASINLCRE--QGFYTQLSTLEQNFLSPIEEMIRSQGFPVSLV---RYGSMFSFFFNE 365 (433)
T ss_pred --CCcccCCCC-cccHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHHHHHHHHHHHHcCCCeEEE---eeceEEEEEEeC
Confidence 000011111 2345566666688888765 3456677777777766665521 12221111 124566666643
Q ss_pred CC----------h----HHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHH
Q psy8850 301 IE----------G----ESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIK 364 (397)
Q Consensus 301 ~~----------~----~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~ 364 (397)
.. . ..+...+. |+.+.+... . ...++..++++|||++++
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~-----------------------~--~~~ls~~ht~~did~~~~ 420 (433)
T PRK00615 366 NRPNNLAEAQLSDIEAFQTFYQSAFSKGVYLSPSPF-----------------------E--ASFLSSAHSMENLDYAQN 420 (433)
T ss_pred CCCCChHHHhhCCHHHHHHHHHHHHHCCeeecCccc-----------------------c--ccceecCCCHHHHHHHHH
Confidence 21 0 12333332 555543210 1 113444569999999999
Q ss_pred HHHHHHHHHH
Q psy8850 365 LLKMKVKKLR 374 (397)
Q Consensus 365 ~l~~~~~~~~ 374 (397)
++.++++.+-
T Consensus 421 a~~~~~~~~~ 430 (433)
T PRK00615 421 VLIDSLEKVF 430 (433)
T ss_pred HHHHHHHHHh
Confidence 9999998764
No 359
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.78 E-value=7.9e-17 Score=141.85 Aligned_cols=317 Identities=15% Similarity=0.136 Sum_probs=201.7
Q ss_pred CCCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHH-hCCC-----CC--cEEEeCChhHHHHHHHH
Q psy8850 5 ATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQL-IYAD-----PR--EIIWTSGATESNNLAIK 76 (397)
Q Consensus 5 ~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~-~~~~-----~~--~i~~~~g~t~a~~~~l~ 76 (397)
+.+|.-+.|.++-+..+.. +.. -.|.......+..+.++++ ||.+ .+ .-+-|.|||.|+.++..
T Consensus 41 Gk~pvl~aV~~Ae~~l~~~----~~~----k~Yl~i~G~~~f~~~~~~llFG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~ 112 (396)
T COG1448 41 GKTPVLRAVKKAEKRLLEQ----EKT----KNYLPIEGLPEFLEAVQKLLFGADSPALAEDRVATVQTLGGTGALRVAAD 112 (396)
T ss_pred CCcchhHHHHHHHHHhhcc----ccc----cccCCcCCcHHHHHHHHHHhcCCCcHHHHhhhHhheecCCcchHHHHHHH
Confidence 4445455666665444433 111 1233344566666666665 4532 11 24567899999999999
Q ss_pred HhHhhhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEecc-C-CCCCCCHHHHHHHhcC---CceEEEEecccCcccc
Q psy8850 77 GAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKP-K-NNGLITLSQLEEKICS---DTILVSVMLVNNEIGV 151 (397)
Q Consensus 77 ~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~-~-~~~~~d~~~l~~~i~~---~~~~v~~~~~~~~tG~ 151 (397)
.+.+. .+...|.+++|.++.+...+... |+++..+|+ | ++..+|.+.+-+.+.+ +..++.-..+|||||.
T Consensus 113 fl~~~--~~~~~vwis~PtW~NH~~If~~a---Gl~v~~Y~Yyd~~~~~~df~~mla~L~~a~~~~vvLLH~CcHNPTG~ 187 (396)
T COG1448 113 FLARF--FPDATVWISDPTWPNHKAIFEAA---GLEVETYPYYDAETKGLDFDGMLADLKTAPEGSVVLLHGCCHNPTGI 187 (396)
T ss_pred HHHHh--CCCceEEeCCCCcHhHHHHHHhc---CCceeeeeccccccccccHHHHHHHHHhCCCCCEEEEecCCCCCCCC
Confidence 77654 45577999999999999888888 999999887 3 3456898888877754 5567778889999999
Q ss_pred ccc---HHHHHHHHHhcCcEEEEecccc-cCccccccCcc---------cccEEEeccccccCCCC--ceEEEEecCCCC
Q psy8850 152 IQP---ILEIGELCRSKGVIFHCDAAQA-VGKIDINIQNY---------KVDLMSFSAHKIYGPKG--IGALYIRRNPRT 216 (397)
Q Consensus 152 ~~~---l~~i~~l~~~~gi~livD~a~~-~~~~~~~~~~~---------~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~ 216 (397)
-++ +++|.++.+++|.+.++|-||- ++.- ++-+.+ ..-+++.|++|.+|..| +|.+.+-.+..+
T Consensus 188 D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~G-leeDa~~lR~~a~~~~~~lva~S~SKnfgLYgERVGa~~vva~~~~ 266 (396)
T COG1448 188 DPTEEQWQELADLIKERGLIPFFDIAYQGFADG-LEEDAYALRLFAEVGPELLVASSFSKNFGLYGERVGALSVVAEDAE 266 (396)
T ss_pred CCCHHHHHHHHHHHHHcCCeeeeehhhhhhccc-hHHHHHHHHHHHHhCCcEEEEehhhhhhhhhhhccceeEEEeCCHH
Confidence 777 5678888999999999998864 3332 211111 23688999999666444 455544322212
Q ss_pred ccccccccCCccccccCCCCchhHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHhhhcCc--EEEeCCCCC
Q psy8850 217 RIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFR------LARIEMKEELKRILFLQKRLYNGLMESIEE--IYINGDMNN 288 (397)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~------~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~~~~~~~ 288 (397)
.......-.....+...+.|+..+.......|+ .+..++..+++++..++..|.+.|++..+. +..+..+
T Consensus 267 ~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~mR~~lv~~L~~~~~~~~f~~i~~Q-- 344 (396)
T COG1448 267 EADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRAEWEQELEEMRQRILEMRQALVDALKALGAPRNFDFIISQ-- 344 (396)
T ss_pred HHHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchHhhc--
Confidence 111111000011222334555555544433332 334468889999999999999999883222 3333322
Q ss_pred CCCceEEEEecCCChHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHH
Q psy8850 289 RIPHNLNISFNFIEGESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLL 366 (397)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l 366 (397)
.+ +|.+.+.+..++..-.. +|.+..+ + ||++.. .++..|+++++++
T Consensus 345 --~G--MFsy~Gls~~QV~rLree~~IY~v~s-------------------------G--Ri~vaG-l~~~ni~~va~ai 392 (396)
T COG1448 345 --RG--MFSYTGLSPEQVDRLREEFGIYLVAS-------------------------G--RINVAG-LNTSNIDYVAKAI 392 (396)
T ss_pred --Cc--eeecCCCCHHHHHHHHHhccEEEecC-------------------------C--eeeecc-CChhhHHHHHHHH
Confidence 23 35556777766543332 6666533 1 999987 6799999999999
Q ss_pred HHH
Q psy8850 367 KMK 369 (397)
Q Consensus 367 ~~~ 369 (397)
.++
T Consensus 393 ~~v 395 (396)
T COG1448 393 AAV 395 (396)
T ss_pred Hhh
Confidence 875
No 360
>KOG2467|consensus
Probab=99.78 E-value=2.6e-16 Score=136.73 Aligned_cols=345 Identities=17% Similarity=0.214 Sum_probs=227.0
Q ss_pred CCCCCCHHHHHHHHHHHhhcc--CCCCCCCcchhhhHHHHHH-HHHHHHHHHhCCCCCc--E-EEeCChhHHHHHHHHHh
Q psy8850 5 ATTPIDPRVVDKMIPYLRVQF--GNPASRNHIYGWTAEKAIE-KARNEVAQLIYADPRE--I-IWTSGATESNNLAIKGA 78 (397)
Q Consensus 5 ~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~la~~~~~~~~~--i-~~~~g~t~a~~~~l~~l 78 (397)
|....+.+|++++-..+...+ +.|.. .|..+....+.++ -+++...+.|+++++. | +-.-||+-|+..+..++
T Consensus 48 SENFts~aVmeAlGS~ltNKYSEGyPG~-RYYGGne~ID~iE~LCq~RALeaF~ldp~kWGVNVQp~SGSPANfavYtal 126 (477)
T KOG2467|consen 48 SENFTSRAVMEALGSCLTNKYSEGYPGA-RYYGGNEYIDQIELLCQKRALEAFGLDPEKWGVNVQPYSGSPANFAVYTAL 126 (477)
T ss_pred cccchHHHHHHHHhHHhhcccccCCCcc-cccCcchHHHHHHHHHHHHHHHHhCCCHHHCceeeccCCCCchhhHHHhhh
Confidence 344567889999999988755 67776 5555555554444 4788889999998873 2 22347778999999999
Q ss_pred HhhhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEE-------EeccC-CCCCCCHHHHHHHhcC-CceEEEEecccCcc
Q psy8850 79 AHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVT-------YLKPK-NNGLITLSQLEEKICS-DTILVSVMLVNNEI 149 (397)
Q Consensus 79 ~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~-------~v~~~-~~~~~d~~~l~~~i~~-~~~~v~~~~~~~~t 149 (397)
+ +|++.|.-.+.-+.++...--......+.-+ .+.+| .+|.||.|.||+.... +|++++.-...+
T Consensus 127 l----~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG~IDYD~Le~~A~~frPk~iiaG~SaY-- 200 (477)
T KOG2467|consen 127 L----KPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTGYIDYDKLEKTATLFRPKLIIAGTSAY-- 200 (477)
T ss_pred c----CCCCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCCCceehHHHHHHHHhcCCcEEEeccccc--
Confidence 8 8999987555544444332221111111111 12334 5899999999986554 788887643332
Q ss_pred cccccHHHHHHHHHhcCcEEEEecccccCc-----cccccCcccccEEEecccc-ccCCCCceEEEEecCCCCcc----c
Q psy8850 150 GVIQPILEIGELCRSKGVIFHCDAAQAVGK-----IDINIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRI----E 219 (397)
Q Consensus 150 G~~~~l~~i~~l~~~~gi~livD~a~~~~~-----~~~~~~~~~~d~~~~s~~K-~~g~~g~g~~~~~~~~~~~~----~ 219 (397)
-...|.+++.++|.+.|+++++|-+|-.|. .+-.+. .+|+++.+.|| +.||+| |.++.++.....- .
T Consensus 201 ~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFe--y~DiVTTTTHKsLRGPRg-~mIFyRkGvk~~~~k~g~ 277 (477)
T KOG2467|consen 201 SRLIDYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFE--YCDIVTTTTHKSLRGPRG-AMIFYRKGVKSIKPKQGK 277 (477)
T ss_pred hhhccHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCccc--ccceeeccccccccCCcc-eeEEEeccCCcCCCCCCC
Confidence 356788999999999999999999986443 333333 68999999999 999986 8888775321110 0
Q ss_pred cccccCC-----ccccccCCCCchhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCce
Q psy8850 220 AQIHGGG-----HEYGLRSGTLATHQIVGMGEAFRLARI-EMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHN 293 (397)
Q Consensus 220 ~~~~~~~-----~~~~~~~~~~~~~~~~~l~~al~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 293 (397)
....+.. ....-..|.|-...+.++..||+.... ++..+.+++..+.+.|.++|.+ .|+.++..- ...++
T Consensus 278 ~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~~Nakala~~l~~--~Gy~lvtgG--TDnHl 353 (477)
T KOG2467|consen 278 EILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKEYQKQVLKNAKALASALIS--RGYKLVTGG--TDNHL 353 (477)
T ss_pred cceechhhhhhhhccccccCCCCcchHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHH--cCceEecCC--ccceE
Confidence 1011100 001112345666889999999997754 6889999999999999999998 788888642 22456
Q ss_pred EEEEec--CCChHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCC----HHHHHHHHHH
Q psy8850 294 LNISFN--FIEGESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTT----EKEIDFTIKL 365 (397)
Q Consensus 294 ~~~~~~--~~~~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~----~~~i~~~~~~ 365 (397)
+.+.++ +.+...+-.-|. +|.+.....+ |-.....++.||+..+..++ ++|++++.+.
T Consensus 354 vLvDLr~~G~dGarvE~vle~~~I~~NKNtvp--------------GD~Sal~PgGiRiGtPAmTsRG~~e~df~~v~~f 419 (477)
T KOG2467|consen 354 VLVDLRPKGVDGARVEKVLELCHIALNKNTVP--------------GDKSALSPGGIRIGTPAMTSRGFGEEDFEKVADF 419 (477)
T ss_pred EEEeccccCCchHHHHHHHHHhhhhhcCCcCC--------------CCccccCCCceeccchhhcccCccHHHHHHHHHH
Confidence 666654 455554444433 4433322111 12233445889998776655 8999999999
Q ss_pred HHHHHHHHHhcC
Q psy8850 366 LKMKVKKLRELS 377 (397)
Q Consensus 366 l~~~~~~~~~~~ 377 (397)
|.++++--.+..
T Consensus 420 i~~av~i~~~~~ 431 (477)
T KOG2467|consen 420 IDRAVKIALEIQ 431 (477)
T ss_pred HHHHHHHHHHHH
Confidence 998876555544
No 361
>KOG1357|consensus
Probab=99.77 E-value=2.5e-17 Score=146.89 Aligned_cols=324 Identities=15% Similarity=0.181 Sum_probs=223.3
Q ss_pred CCCCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhc
Q psy8850 4 SATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYK 83 (397)
Q Consensus 4 ~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~ 83 (397)
.+.++..+.+.+++..+-....+. .+. -...+...++++..|+++|.+. .++|.-|- ..+.+.+.+++
T Consensus 151 ~~~g~ca~~~~~~~~kygl~~css----~~e--~G~~~~hkelE~l~A~f~g~e~-a~vF~mGf-~TNs~~~p~l~---- 218 (519)
T KOG1357|consen 151 QSVGPCAEASLKSFDKYGLSRCSS----RHE--AGTTEEHKELEELVARFLGVED-AIVFSMGF-ATNSMNIPSLL---- 218 (519)
T ss_pred ccCCcCChHHHHHHHHhccccccc----chh--cccHHHHHHHHHHHHHhcCCcc-eEEEeccc-cccccCcceee----
Confidence 345677888888887765442211 111 1224578889999999999984 56666653 45666777777
Q ss_pred cCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcC-------C------ceEEEEecccCccc
Q psy8850 84 KRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS-------D------TILVSVMLVNNEIG 150 (397)
Q Consensus 84 ~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~-------~------~~~v~~~~~~~~tG 150 (397)
.++.-|+-....|.|....+... |++++....+ |.++||+.+.+ + ..+|+++.+.++-|
T Consensus 219 ~~gsLIiSDelNHaSi~~GaRLS---gAtiRVfkHN-----dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg 290 (519)
T KOG1357|consen 219 GKGSLIISDELNHASLITGARLS---GATTRVFRHN-----DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEG 290 (519)
T ss_pred cCCcceeeccccchheecccccc---CceEEEEecC-----CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccC
Confidence 78899999999999988877766 9999988877 77888887743 1 23778888888999
Q ss_pred ccccHHHHHHHHHhcCcEEEEecccccCcccc---------ccCcccccEEEeccccccCCCCceEEEEecCCCCccccc
Q psy8850 151 VIQPILEIGELCRSKGVIFHCDAAQAVGKIDI---------NIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQ 221 (397)
Q Consensus 151 ~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~---------~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~~~~ 221 (397)
.++++.++++++|+|.++++.|++|+.|.... ....-++|++.+++.|.+|..| |++..+++..+.++..
T Consensus 291 ~iv~Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga~G-Gyiagsk~lid~lrt~ 369 (519)
T KOG1357|consen 291 TIVDLPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGAAG-GYIAGSKELIDYLRTP 369 (519)
T ss_pred eecccHHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhccccc-ceecCcHHHHhhhccC
Confidence 99999999999999999999999999766521 1222268999999999888865 9999998777666543
Q ss_pred cccCCccccccCCCCchhHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEE
Q psy8850 222 IHGGGHEYGLRSGTLATHQIVGMGEAFRLAR-----IEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNI 296 (397)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~-----~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 296 (397)
.... .-....+.+.+.....+++.+. +..++..+++.++..+++..|.+ .++.+.+..+.....++..
T Consensus 370 s~~~-----~yat~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~--~gfivyG~~dSpVvplll~ 442 (519)
T KOG1357|consen 370 SPSA-----LYATSLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQK--MGFIVYGNNDSPVVPLLLY 442 (519)
T ss_pred CCce-----eecccCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhc--CcEEEecCCCCCcceeeec
Confidence 3221 1111222222222334555443 24677889999999999999998 8888888766443334333
Q ss_pred EecCCChHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHH
Q psy8850 297 SFNFIEGESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 297 ~~~~~~~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 373 (397)
.... -..+-+.+. ++.+....+..+ +.-...+|+|.+..++.|+++++++.+.+.=++.
T Consensus 443 ~~~k--~~~f~r~~l~~nigvVvvgfPat----------------pl~e~r~R~c~Sa~ht~e~ld~~l~~i~~~g~~~ 503 (519)
T KOG1357|consen 443 GPAK--IVAFSREMLERNIGVVVVGFPAT----------------PLLESRARFCLSASHTKEDLDRALEVIDRVGDED 503 (519)
T ss_pred Cccc--ccHHHHHHHhcCceEEEEeCCCc----------------hHHHhHHHhhhcccccHHHHHHHHHHHhhhchhh
Confidence 3222 234443443 554444332221 1123667999999999999999999988775443
No 362
>KOG0633|consensus
Probab=99.76 E-value=2.2e-17 Score=137.00 Aligned_cols=284 Identities=15% Similarity=0.083 Sum_probs=191.7
Q ss_pred HHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCC-CEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCC
Q psy8850 46 ARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRG-KHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLI 124 (397)
Q Consensus 46 ~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g-~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~ 124 (397)
++..++.--+..+++|.+.-|+.+.++++++..+ .|| ++|++..|.|.-+.-.+..- ++.|+.+|.+.++.+
T Consensus 74 ls~a~~~dkpLt~dnic~GvGsDE~ID~iiR~~c----~PGkeKIl~cPPtysMY~v~A~iN---d~eVvkvpl~pdF~l 146 (375)
T KOG0633|consen 74 LSDALAQDKPLTSDNICVGVGSDELIDLIIRCVC----DPGKEKILDCPPTYSMYVVDAAIN---DAEVVKVPLNPDFSL 146 (375)
T ss_pred hhhhcccCCCCCccceEEecCcHHHHHHHHhhee----cCCccceeecCCcceeEEEEeecC---CceEEEecCCCCccc
Confidence 4444444456778899999999999999999988 677 89999999886665433333 889999999999999
Q ss_pred CHHHHHHHhcC--CceEEEEecccCcccccccHHHHHHHHHhc-CcEEEEecccccC----ccccccCcccccEEEeccc
Q psy8850 125 TLSQLEEKICS--DTILVSVMLVNNEIGVIQPILEIGELCRSK-GVIFHCDAAQAVG----KIDINIQNYKVDLMSFSAH 197 (397)
Q Consensus 125 d~~~l~~~i~~--~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~-gi~livD~a~~~~----~~~~~~~~~~~d~~~~s~~ 197 (397)
+.+++.+.+.. .++++++++|.||||.+...+.|.++..-- |.+|++|++|--. +.-.-...+..-+++.+++
T Consensus 147 nvdai~evl~~ds~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAYidFsg~~S~~~lV~kYpNLivlqTlS 226 (375)
T KOG0633|consen 147 NVDAIAEVLELDSKIKCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAYIDFSGVESRMKLVKKYPNLIVLQTLS 226 (375)
T ss_pred cHHHHHHHHhccccceEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeeeeEeeccccccchHhHhCCceeehhhhh
Confidence 99999988764 689999999999999999999998887765 8999999998622 2111233445667888999
Q ss_pred cccCCCCc--eEEEEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHh
Q psy8850 198 KIYGPKGI--GALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFR-LARIEMKEELKRILFLQKRLYNGLM 274 (397)
Q Consensus 198 K~~g~~g~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~-~~~~~~~~~~~~~~~~~~~l~~~l~ 274 (397)
|.+|..|+ |+.+.+.....-+...... .+.......+++ +|+. .-...++..+..+.+.+.+|.+.|+
T Consensus 227 KsfGLAGiRvG~~~~~~~ia~iln~~KaP--------YNiS~~~s~~AL-~Als~~n~kkme~~rdaiv~er~RL~keLt 297 (375)
T KOG0633|consen 227 KSFGLAGIRVGYGAFPLSIAEILNRAKAP--------YNISVAGSVAAL-AALSDSNGKKMEDVRDAIVRERERLFKELT 297 (375)
T ss_pred hhcCcceeEeecccccHHHHHHHHhccCC--------ccccchhHHHHH-HhcCcccchHHHHHHHHHHHHHHHHHHHhh
Confidence 98887774 5444443332222221111 011122333444 2332 1122477888888999999999999
Q ss_pred hhcCcEEEeCCCCCCCCceEEEEecCCCh---HHHHHHhC---CcEecccCccCCCCCChhhHHHhhCCCccccCceEEE
Q psy8850 275 ESIEEIYINGDMNNRIPHNLNISFNFIEG---ESLLMAIK---DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRF 348 (397)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~---~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi 348 (397)
+ ++.+.-+ +.....+++.+.+.+.+. ..+...+. |+.++-.. ......+++||
T Consensus 298 ~-v~~~~~~--~gg~daNFiLi~v~~~~n~~akkly~q~at~~gVvVRfrg------------------se~~c~G~lRi 356 (375)
T KOG0633|consen 298 E-VPFLNDY--PGGSDANFILIEVTGGDNGMAKKLYKQDATKMGVVVRFRG------------------SEEGCKGYLRI 356 (375)
T ss_pred c-CccccCC--CCcccccEEEEEEcCCCcHHHHHHHHHHHHhcceEEEEcC------------------CccccceeEEE
Confidence 9 7765422 223335666666654332 33333332 66665321 11224589999
Q ss_pred eeCCCCCHHHHHHHHHHHHHH
Q psy8850 349 TIGRFTTEKEIDFTIKLLKMK 369 (397)
Q Consensus 349 ~~~~~~~~~~i~~~~~~l~~~ 369 (397)
+++ ++|+-+-+++.++++
T Consensus 357 tvG---t~EentvL~k~~K~~ 374 (375)
T KOG0633|consen 357 TVG---TPEENTVLMKCLKQF 374 (375)
T ss_pred EcC---CcccchHHHHHHHhh
Confidence 998 678888888888765
No 363
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.76 E-value=4.5e-19 Score=157.61 Aligned_cols=247 Identities=21% Similarity=0.263 Sum_probs=164.7
Q ss_pred CCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCE
Q psy8850 9 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKH 88 (397)
Q Consensus 9 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~ 88 (397)
+.+++.+++.+.... .. +|...+...++++.+++++|.+ ..+|+++||.|+.+++++++ +|++.
T Consensus 7 ~~~~m~~a~~~a~~g---------d~-~Yg~D~~~~~l~~~i~~l~g~e--~a~f~~sGT~An~~al~~~~----~~~~~ 70 (290)
T PF01212_consen 7 PTPAMLEAMAAANVG---------DD-AYGEDPTTARLEERIAELFGKE--AALFVPSGTMANQLALRAHL----RPGES 70 (290)
T ss_dssp S-HHEEHHHHHTTSB----------C-CTTSSHHHHHHHHHHHHHHTSS--EEEEESSHHHHHHHHHHHHH----HTTEE
T ss_pred CCHHHHHHHHccccC---------Cc-ccCCChhHHHHHHHHHHHcCCC--EEEEeCCCChHHHHHHHHHH----hcCCc
Confidence 678888888554432 11 2445668899999999999988 56799999999999999998 68899
Q ss_pred EEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcC------CceEEEEecccCcc-ccccc---HHHH
Q psy8850 89 IITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS------DTILVSVMLVNNEI-GVIQP---ILEI 158 (397)
Q Consensus 89 vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~------~~~~v~~~~~~~~t-G~~~~---l~~i 158 (397)
|++.+++|..+...-......|.++..++.+++|.+|+++|++.+.+ ++++|+++.+++.. |.+++ +++|
T Consensus 71 vi~~~~aHi~~~E~ga~~~~~G~~~~~l~~~~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai 150 (290)
T PF01212_consen 71 VICADTAHIHFDETGAIEELSGAKLIPLPSDDDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAI 150 (290)
T ss_dssp EEEETTEHHHHSSTTHHHHHTTCEEEEEBECTGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHH
T ss_pred eeccccceeeeeccchhhHhcCcEEEECCCcccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHH
Confidence 99999988765554433223499999999887799999999999865 57899999998874 77887 5678
Q ss_pred HHHHHhcCcEEEEecccc------cCccccccCcccccEEEeccccccCCCCceEEEEecCCCCccccc--cccCCcccc
Q psy8850 159 GELCRSKGVIFHCDAAQA------VGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQ--IHGGGHEYG 230 (397)
Q Consensus 159 ~~l~~~~gi~livD~a~~------~~~~~~~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~~~~--~~~~~~~~~ 230 (397)
.++||+||++|++|++-- .+....++. .++|++++|++|.+|.++.++++.+++.+++.... ..++
T Consensus 151 ~~~a~~~gl~lhmDGARl~~a~~~~~~~~~e~~-~~~D~v~~~~tK~~g~~~Gavl~~~~~~i~~~~~~~k~~gg----- 224 (290)
T PF01212_consen 151 SELAREHGLPLHMDGARLANAAAALGVSLAEIA-AGADSVSFGGTKNGGAPGGAVLAGNKEFIAKARRQRKRLGG----- 224 (290)
T ss_dssp HHHHHHHT-EEEEEETTHHHHHCHHHHHHHHHH-TTSSEEEEETTSTT-SSSEEEEEESHHHHHHHHHHHHHHTH-----
T ss_pred HHHHHhCceEEEEehhhHHHhhhcccccHHHHh-hhCCEEEEEEEcccccccceEEEechHHHHHHHHHHHHhcc-----
Confidence 888999999999998842 122122222 27999999999955544458888887643332111 1111
Q ss_pred ccCCCCchhHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeC
Q psy8850 231 LRSGTLATHQIVGM-----GEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYING 284 (397)
Q Consensus 231 ~~~~~~~~~~~~~l-----~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 284 (397)
.....++.+. ..++..+. .......+..+++++|.+.|+. ++.. +..
T Consensus 225 ----~~~~~G~~~a~~~~~~~~l~~l~-~~~~~~~~~~~~A~~La~~l~~-~~~~-~~~ 276 (290)
T PF01212_consen 225 ----GMRQAGVLAAAELYQFAALRALE-LWLERARHANAMAKRLAAGLEA-LGGV-LPR 276 (290)
T ss_dssp ----HHHHTTHHHHHHHHHHHHHCHEE-CSHHHHHCHHHHHHCHHHCHHE-ECEE-EET
T ss_pred ----CeeecceeeeechhhHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHH-CCCc-ccC
Confidence 1110111111 01111111 1244566777889999999988 5543 443
No 364
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.76 E-value=9.5e-16 Score=145.38 Aligned_cols=321 Identities=14% Similarity=0.126 Sum_probs=182.7
Q ss_pred CCCCHHHH--HHHHHHHhhcc-CCCCCCCcchhhhHHHHHHHHHHHHHHHhCC-CCCcEEEeCChhHHHHHHHHHhHhhh
Q psy8850 7 TPIDPRVV--DKMIPYLRVQF-GNPASRNHIYGWTAEKAIEKARNEVAQLIYA-DPREIIWTSGATESNNLAIKGAAHFY 82 (397)
Q Consensus 7 ~~~~~~v~--~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~i~~~~g~t~a~~~~l~~l~~~~ 82 (397)
+..+|.|. +++.+++.... ..+.. .. ...+...++.+.|+++.+. ..+.++|++||++|++.+++.... +
T Consensus 53 Gh~~p~v~~~~ai~~q~~~~~~~~~~~-~~----~~~~~~~~l~~~l~~~~~~~~~~~v~f~~sGsEAve~AlklAr~-~ 126 (431)
T TIGR03251 53 GMNHPALVDDLAFRARLGAAAVNKPSN-SD----VYTVAMARFVDTFARVLGDPALPHLFFIEGGALAVENALKTAFD-W 126 (431)
T ss_pred CCCChhhhHHHHHHHHHHHhhhccccc-CC----CCCHHHHHHHHHHHHhcCCCCcCEEEEeCCcHHHHHHHHHHHHH-H
Confidence 45678999 89999887532 11111 11 1123345566666666532 235799999999999999996543 3
Q ss_pred cc-----------CCCEEEEcCCCChhhHHHHHHHhh-CCcEEE--------Ee--c-----cCCCC--------CCCHH
Q psy8850 83 KK-----------RGKHIITVQTEHKSVLDSIRKLEN-DGFRVT--------YL--K-----PKNNG--------LITLS 127 (397)
Q Consensus 83 ~~-----------~g~~vl~~~~~~~s~~~~~~~~~~-~g~~v~--------~v--~-----~~~~~--------~~d~~ 127 (397)
+. .+.+|+....+|++.......... .+..-. .+ | .+... .-+++
T Consensus 127 t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~ 206 (431)
T TIGR03251 127 KSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLTFPLDAPNLDQVIALEEEALR 206 (431)
T ss_pred hhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCcccCCccccccchhhHHHHHHHH
Confidence 21 135677777766665543332211 101100 01 1 11000 01244
Q ss_pred HHHHHhc---CCceEEEEecccCccccccc----HHHHHHHHHhcCcEEEEecccc-cCcc----ccccCcccccEEEec
Q psy8850 128 QLEEKIC---SDTILVSVMLVNNEIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKI----DINIQNYKVDLMSFS 195 (397)
Q Consensus 128 ~l~~~i~---~~~~~v~~~~~~~~tG~~~~----l~~i~~l~~~~gi~livD~a~~-~~~~----~~~~~~~~~d~~~~s 195 (397)
++++.+. +++.+|+++.++...|.+.| +++|.++|++||+++|+|++++ +|.. ..+.....+|+++++
T Consensus 207 ~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~a~~~~gv~PDi~~~g 286 (431)
T TIGR03251 207 QARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVQPDIVAFG 286 (431)
T ss_pred HHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccchHHHHHhcCCCCCEEEec
Confidence 5555663 57899999999999998764 7899999999999999999987 4332 122234478999876
Q ss_pred cccccCCCCceEEEEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy8850 196 AHKIYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLME 275 (397)
Q Consensus 196 ~~K~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~ 275 (397)
|.. + ..|++..+ +........ ..+......+. +.+...+++..++++.+.+. .+.++..++.+++.+.|++
T Consensus 287 --K~~-~-~~g~~~~~-~i~~~~~~~-~~~~~~~~~T~-~gnpl~~aaa~a~L~~l~~~--~l~~~~~~~g~~l~~~L~~ 357 (431)
T TIGR03251 287 --KKT-Q-VCGIMAGR-RVDEVADNV-FAVPSRLNSTW-GGNLVDMVRATRILEIIEEE--RLVDNARVQGAHLLARLHE 357 (431)
T ss_pred --ccC-c-cceEEecc-hHHHhhhhc-ccCccccCCCC-CCCHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHH
Confidence 733 3 23555433 211111101 01000011122 23455566666888887652 3445555555666655544
Q ss_pred h---cCcEEEeCCCCCCCCceEEEEecCCC-hHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEe
Q psy8850 276 S---IEEIYINGDMNNRIPHNLNISFNFIE-GESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFT 349 (397)
Q Consensus 276 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~ 349 (397)
. .+++ ..+.. ..+.++.+.++... ...+...+. |+.+.+.. .+.+|++
T Consensus 358 l~~~~~~~--i~~vr-g~G~~~~i~~~~~~~~~~~~~~l~~~Gvl~~~~g-----------------------~~~lr~~ 411 (431)
T TIGR03251 358 LAAEFPHL--VSNPR-GRGLMCAFDLPSTADRDEVIRQLYREGVLLLGCG-----------------------ERSIRFR 411 (431)
T ss_pred HHHhCccc--eeccc-ccceeEEEEeCCHHHHHHHHHHHHhCCeEEecCC-----------------------CCeEEEE
Confidence 1 2322 22211 12445566665322 234555554 77665421 2679999
Q ss_pred eCCCCCHHHHHHHHHHHHH
Q psy8850 350 IGRFTTEKEIDFTIKLLKM 368 (397)
Q Consensus 350 ~~~~~~~~~i~~~~~~l~~ 368 (397)
++..++++|||+++++|.+
T Consensus 412 P~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 412 PPLTVTREEIDAAIDAIRR 430 (431)
T ss_pred CCccCCHHHHHHHHHHHHh
Confidence 9999999999999999875
No 365
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.75 E-value=1.4e-15 Score=139.66 Aligned_cols=292 Identities=17% Similarity=0.195 Sum_probs=175.1
Q ss_pred hhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHHhh-CCcEEE
Q psy8850 36 GWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLEN-DGFRVT 114 (397)
Q Consensus 36 ~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~-~g~~v~ 114 (397)
+...-+.+.+++..++++.|.+..+.-+..++|.+-+.++.+... ..+++++|+++...||.+...+..... .|++++
T Consensus 105 sQG~Lq~lfe~Qs~i~eLTGmdvaNaSlyd~atA~aEa~~ma~r~-~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv 183 (429)
T PF02347_consen 105 SQGRLQALFEYQSMICELTGMDVANASLYDGATAAAEAMLMAVRA-TKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIV 183 (429)
T ss_dssp BHHHHHHHHHHHHHHHHHHTSSEE-SEBSSCCHHHHHHHHHHHHH-HTT---EEEEETTS-CHHHHHHHHHCCHCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHhhCCCccCCCCCChhHHHHHHHHHHHHh-cccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEE
Confidence 334457788999999999999966677888999888877665443 223346999999999999987776544 399999
Q ss_pred EeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCcc-ccccCcccccEEE
Q psy8850 115 YLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKI-DINIQNYKVDLMS 193 (397)
Q Consensus 115 ~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~-~~~~~~~~~d~~~ 193 (397)
.++.++++..| .+++.+|++++|++ .|.+.++++|.+++|++|+++++ .+.-.... -....++++|+++
T Consensus 184 ~~~~~~~~~~d--------~~~~a~v~vq~Pn~-~G~~ed~~~i~~~~h~~gal~~~-~ad~~aL~~l~~Pge~GADI~v 253 (429)
T PF02347_consen 184 EVPLDEDGTTD--------DDDTAAVMVQNPNT-FGVFEDIKEIADIAHAAGALVIV-GADPNALGGLKSPGEYGADIVV 253 (429)
T ss_dssp EE-BBTTCSB---------STTEEEEEEESS-T-TSB--THHHHHHHHHHTT-EEEE-CGGCCGCCTC--GGGGT-SEEE
T ss_pred EecccccCCcc--------ccCeEEEEeecCCC-CceEeeHHHHHHHHHHcCCEEEE-ecCHHHHhCcCChhhcCccEEe
Confidence 99998877666 67899999999964 59999999999999999999988 66442211 1234566999997
Q ss_pred ecccc-c-----cCCCCceEEEEecCCCCcccccccc------CCc-----------cccccCCCCchh---HHHHHHHH
Q psy8850 194 FSAHK-I-----YGPKGIGALYIRRNPRTRIEAQIHG------GGH-----------EYGLRSGTLATH---QIVGMGEA 247 (397)
Q Consensus 194 ~s~~K-~-----~g~~g~g~~~~~~~~~~~~~~~~~~------~~~-----------~~~~~~~~~~~~---~~~~l~~a 247 (397)
++ +| + +|+++.|++.+++++...+.-.+.| |.. ..+..-.+.|.. .++++.++
T Consensus 254 g~-~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIctnqaL~A~~a~ 332 (429)
T PF02347_consen 254 GE-HQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNICTNQALLALAAA 332 (429)
T ss_dssp EC-CTTTT---CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS-HHHHHHHH
T ss_pred eC-CCCCcccCCCCCCCeeeEEEhhhhhhhCCCceecccccccccceeeeccccccccccccchhhhhhhhHHHHHHHHH
Confidence 77 56 5 4455689999998866665443332 111 111223344432 33333333
Q ss_pred HH---HHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCChHHHHHHhC--CcEecccCccC
Q psy8850 248 FR---LARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAIK--DIAVSSGSACT 322 (397)
Q Consensus 248 l~---~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~i~~~~g~~~~ 322 (397)
+- +..+|++++.++...++.++.+.|++ +.+..+... .+.-.+....+.....++.+... |+....
T Consensus 333 ~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~-~~~~~~~~~---~f~e~v~~~~~~~~~~~l~~~~~~~gl~~~~----- 403 (429)
T PF02347_consen 333 IYLAYLGPEGLREIAERIHLNAHYLAERLKK-IYGLPFDNP---FFFEFVVVFSKDKEVEELLKRGIEGGLNLRY----- 403 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-TTBECSSSS---SBSSEEEEESS-HHHHHHHHTT----EEEGG-----
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHHHHHHHH-hcCcccCCC---CceeeeeecCCcHHHHHHHHHHHhcCCCccc-----
Confidence 32 22568999999999999999999999 544433221 11222222222111112222222 311110
Q ss_pred CCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHH
Q psy8850 323 SASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLL 366 (397)
Q Consensus 323 ~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l 366 (397)
...+.+-+|++...+++|||++++++
T Consensus 404 ------------------~~~~~~li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 404 ------------------PDDGALLICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp ------------------G-SSEEEEE--TT--HHHHHHHHH--
T ss_pred ------------------cCCCeEEEEccCCCCHHHHHHHHhcC
Confidence 01258899999999999999999875
No 366
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.75 E-value=2.6e-15 Score=141.99 Aligned_cols=320 Identities=13% Similarity=0.109 Sum_probs=181.6
Q ss_pred CCCCHHHHHHHHHH-HhhccCCCCCCCcchhhhHHHHHHHHHHHH----HHHhCCCCCcEEEeCChhHHHHHHHHHhHhh
Q psy8850 7 TPIDPRVVDKMIPY-LRVQFGNPASRNHIYGWTAEKAIEKARNEV----AQLIYADPREIIWTSGATESNNLAIKGAAHF 81 (397)
Q Consensus 7 ~~~~~~v~~a~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----a~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~ 81 (397)
+..+|.|.++++++ ......+.. .+ . .+...++.+.+ +++..-+.+.++|++||++|++.+++....+
T Consensus 73 Gh~~p~i~~Ai~~q~~~~~l~~~~--~~-~----~~~~~~la~~l~~~l~~~~p~~~~~v~f~~SGsEAvE~AlKlAr~~ 145 (464)
T TIGR00699 73 GYNNPALLKAAQSPEMATTLINRP--AL-G----NFPSKDWAKILKEGILKVAPKGQDQVWTGMSGSDANELAFKAAFMY 145 (464)
T ss_pred CCCCHHHHHHHHHHHHHHhhcccc--cC-C----cHHHHHHHHHHHHhHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHH
Confidence 46789999999984 232111111 11 1 11223344444 4444333357999999999999999966432
Q ss_pred hcc-------------------------CCCEEEEcCCCChhhHHHHHHHhhC------C---cEEEEeccCCC-C----
Q psy8850 82 YKK-------------------------RGKHIITVQTEHKSVLDSIRKLEND------G---FRVTYLKPKNN-G---- 122 (397)
Q Consensus 82 ~~~-------------------------~g~~vl~~~~~~~s~~~~~~~~~~~------g---~~v~~v~~~~~-~---- 122 (397)
+.. ++.+|+....+|++.......+... + ..+..+|.... .
T Consensus 146 ~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~~~~~p~p~~~~~~~~ 225 (464)
T TIGR00699 146 YRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFDWPQAPFPSLKYPLEE 225 (464)
T ss_pred HHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCceecCCCCccccccc
Confidence 210 0236777777666655443332110 1 11122332210 0
Q ss_pred ---------CCCHHHHHHHhc---CCceEEEEecccCccccccc----HHHHHHHHHhcCcEEEEecccc-cCcc----c
Q psy8850 123 ---------LITLSQLEEKIC---SDTILVSVMLVNNEIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKI----D 181 (397)
Q Consensus 123 ---------~~d~~~l~~~i~---~~~~~v~~~~~~~~tG~~~~----l~~i~~l~~~~gi~livD~a~~-~~~~----~ 181 (397)
.-+++++++++. +++.+|+++.+....|.+.| ++++.++|++||+++|+|+++. +|.. .
T Consensus 226 ~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGrtG~~fa 305 (464)
T TIGR00699 226 HVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATGKFWA 305 (464)
T ss_pred ccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeeeCCCCCcchhH
Confidence 013566777774 35889999999999999887 8999999999999999999986 3221 1
Q ss_pred cccCcc--cccEEEeccccccCCCCceEEEEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHH
Q psy8850 182 INIQNY--KVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEEL 259 (397)
Q Consensus 182 ~~~~~~--~~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~ 259 (397)
.+.... .+|+++++ |.+|.. |+++.+ +......+... ..+. ..+...+++..++|+.+.+ .++.
T Consensus 306 ~e~~gv~~~PDi~t~g--K~lg~g--G~~~~~-~~~~~~~~~~~------~~T~-~gnp~~~aaa~a~L~~l~~--~~l~ 371 (464)
T TIGR00699 306 HEHWNLDDPPDMVTFS--KKFQTA--GYFFHD-PAFRPNKPYRQ------FNTW-MGDPSRALILREIIQEIKR--KDLL 371 (464)
T ss_pred HHhcCCCCCCCEEEeh--hhhccC--Cccccc-hhccCCCCccc------ccCC-CCCHHHHHHHHHHHHHHHh--cCHH
Confidence 111222 38998887 944321 223222 21111111111 1122 3344556666678887765 4566
Q ss_pred HHHHHHHHHHHHHHhhhcCcEE-EeCC-CCCCCCceEEEEecCCC-hHHHHHHhC--CcEecccCccCCCCCChhhHHHh
Q psy8850 260 KRILFLQKRLYNGLMESIEEIY-INGD-MNNRIPHNLNISFNFIE-GESLLMAIK--DIAVSSGSACTSASLEPSYVLRA 334 (397)
Q Consensus 260 ~~~~~~~~~l~~~l~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~ 334 (397)
++..++.++|++.|++....+. ++.. .....+.++.+.++... ...+.+.+. |+.+...
T Consensus 372 ~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Glm~gie~~~~~~~~~i~~~~~~~Gvl~~~~---------------- 435 (464)
T TIGR00699 372 ENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFIAWDTPDEAKRDKLLKKARNNGVNIGGC---------------- 435 (464)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEEEEEEecCCHHHHHHHHHHHHHCCcEEecC----------------
Confidence 6777777777777766111121 1111 10112455555654211 234444443 6666431
Q ss_pred hCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHH
Q psy8850 335 LGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKV 370 (397)
Q Consensus 335 ~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~ 370 (397)
+.+.|||.++..++++|||+++++|.+++
T Consensus 436 -------g~~~ir~~Ppl~it~~eid~~~~~l~~~~ 464 (464)
T TIGR00699 436 -------GVKAIRLRPMLVFQKHHADIFLEIISKII 464 (464)
T ss_pred -------CCCeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence 12789999999999999999999998763
No 367
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.75 E-value=8.3e-16 Score=145.91 Aligned_cols=326 Identities=15% Similarity=0.152 Sum_probs=190.7
Q ss_pred CCCCCHHHHH--HHHHHHhhccC-CCCCCCcchhhhHHHHHHHHHHHHHHHhC-CCCCcEEEeCChhHHHHHHHHHhHhh
Q psy8850 6 TTPIDPRVVD--KMIPYLRVQFG-NPASRNHIYGWTAEKAIEKARNEVAQLIY-ADPREIIWTSGATESNNLAIKGAAHF 81 (397)
Q Consensus 6 ~~~~~~~v~~--a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~la~~~~-~~~~~i~~~~g~t~a~~~~l~~l~~~ 81 (397)
.+..+|.|.+ ++++++..... .+.. . . ...+...++.+.|+++.+ -..+.++|++||++|++.+++....+
T Consensus 59 lGh~~p~v~~~~ai~~ql~~l~~~~~~~-~---~-~~~~~~~~la~~l~~~~~p~~~~~v~f~~SGsEAve~AlKlAr~~ 133 (443)
T PRK08297 59 LGMNHPALADDPEFRAELGRAALNKPSN-S---D-VYTVEMARFVDTFARVLGDPELPHLFFVDGGALAVENALKVAFDW 133 (443)
T ss_pred CCCCChHHhhHHHHHHHHHHhhhhcccc-C---C-cCCHHHHHHHHHHHhhcCCCCCCEEEEeCchHHHHHHHHHHHHHH
Confidence 3467899999 99998876321 1111 0 0 112345567777777763 23357999999999999999965432
Q ss_pred h------cc----CCCEEEEcCCCChhhHHHHHHHhh-CC-----cEE---EEeccCC-----CC-C---------CCHH
Q psy8850 82 Y------KK----RGKHIITVQTEHKSVLDSIRKLEN-DG-----FRV---TYLKPKN-----NG-L---------ITLS 127 (397)
Q Consensus 82 ~------~~----~g~~vl~~~~~~~s~~~~~~~~~~-~g-----~~v---~~v~~~~-----~~-~---------~d~~ 127 (397)
. .. .+.+|+....+|++.......+.. .. ... ..++... .+ . -+++
T Consensus 134 ~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (443)
T PRK08297 134 KSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLRFPLPGEDLEEVEALEAEALA 213 (443)
T ss_pred hhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCCCCCcccccchhhHHHHHHHH
Confidence 1 01 135677777766665544333211 00 000 0011100 00 0 0245
Q ss_pred HHHHHhc---CCceEEEEecccCccccccc----HHHHHHHHHhcCcEEEEecccc-cCccc----cccCcccccEEEec
Q psy8850 128 QLEEKIC---SDTILVSVMLVNNEIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKID----INIQNYKVDLMSFS 195 (397)
Q Consensus 128 ~l~~~i~---~~~~~v~~~~~~~~tG~~~~----l~~i~~l~~~~gi~livD~a~~-~~~~~----~~~~~~~~d~~~~s 195 (397)
++++.+. +++.+|+++.++...|.+.| ++++.++|++||+++|+|+++. +|... .+.....+|+++++
T Consensus 214 ~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~g 293 (443)
T PRK08297 214 QARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVRPDIVAFG 293 (443)
T ss_pred HHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCccchHHHHHhcCCCCCEEEec
Confidence 5566664 57889999999988898755 7899999999999999999986 43321 11223368999876
Q ss_pred cccccCCCCceEEEEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy8850 196 AHKIYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLME 275 (397)
Q Consensus 196 ~~K~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~ 275 (397)
|.++ . .|++ +.++........+... .....+.+ .+...+++..++++.+.+ +++.++..++.+++++.|++
T Consensus 294 --K~l~-~-~a~l-~~~~i~~~~~~~~~~~-~~~~~T~~-gnpl~~aaa~a~L~~l~~--~~l~~~~~~~g~~l~~~L~~ 364 (443)
T PRK08297 294 --KKTQ-V-CGIM-AGRRVDEVEDNVFAVS-SRINSTWG-GNLVDMVRARRILEVIEE--DGLVENAARQGEYLLARLEE 364 (443)
T ss_pred --cccc-c-ccee-cchHHHHhhhhhccCc-cccCCCCC-ccHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHH
Confidence 9443 2 2444 3332111111111000 00112222 344555555577887765 35667777777777777765
Q ss_pred h---cCcE--EEeCCCCCCCCceEEEEecCCC-hHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEE
Q psy8850 276 S---IEEI--YINGDMNNRIPHNLNISFNFIE-GESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIR 347 (397)
Q Consensus 276 ~---~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iR 347 (397)
. .+.+ .+.+ .+.++.+.|.+.. ...+...+. |+.+.++. .+.+|
T Consensus 365 l~~~~~~~~~~vrg-----~G~~~~i~~~~~~~~~~~~~~l~~~Gvl~~~~~-----------------------~~~lr 416 (443)
T PRK08297 365 LAAEFPAVVSNVRG-----RGLMCAFDLPTTADRDEVIRRLWEEGVLVLPCG-----------------------ERSIR 416 (443)
T ss_pred HHHHCCCcceeeec-----cceEEEEEecCHHHHHHHHHHHHHCCEEEecCC-----------------------CCeEE
Confidence 1 2322 1111 1456666665322 234554443 77765421 26799
Q ss_pred EeeCCCCCHHHHHHHHHHHHHHHHHH
Q psy8850 348 FTIGRFTTEKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 348 i~~~~~~~~~~i~~~~~~l~~~~~~~ 373 (397)
|+++..++++|+|+++++|.++++++
T Consensus 417 ~~P~l~~t~~eid~~l~~l~~~l~~~ 442 (443)
T PRK08297 417 FRPALTVTTEEIDAAIDALRRALPEV 442 (443)
T ss_pred EECCccCCHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999998764
No 368
>KOG1358|consensus
Probab=99.75 E-value=1.1e-15 Score=134.20 Aligned_cols=324 Identities=14% Similarity=0.142 Sum_probs=215.0
Q ss_pred CCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCE
Q psy8850 9 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKH 88 (397)
Q Consensus 9 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~ 88 (397)
..+++.+.....+..+..... +....|...+...++++.|++++|++ +.|+...|-+ ++..++-++. ++||.
T Consensus 109 ~~~~ike~a~~~lrkyGvGsC--GPrGFYGt~DvHldlE~~iakF~G~E-~aivYs~gF~-ti~S~ipafs----KrGDI 180 (467)
T KOG1358|consen 109 ENEEIKEEASFTLRKYGVGSC--GPRGFYGTIDVHLDLEKRIAKFMGTE-DAIVYSYGFS-TIESAIPAFS----KRGDI 180 (467)
T ss_pred ccHHHHHHHHHHHHHhCCCCc--CCCcccccceeecccHHHHHHhhCCc-ceeeeccccc-hhhhcchhhh----ccCcE
Confidence 367888888888877532222 22333455678889999999999998 4677777765 5666777777 89999
Q ss_pred EEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcCCc-------------eEEEEecccCcccccccH
Q psy8850 89 IITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDT-------------ILVSVMLVNNEIGVIQPI 155 (397)
Q Consensus 89 vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~-------------~~v~~~~~~~~tG~~~~l 155 (397)
|++....+.+....++.. .-++.+...+ |.+++|..+.+++ +.++++...-++|.++|+
T Consensus 181 i~~de~~nfaIq~GlqlS---RS~i~~Fkhn-----dm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~pl 252 (467)
T KOG1358|consen 181 IFVDEAVNFAIQKGLQLS---RSTISYFKHN-----DMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICPL 252 (467)
T ss_pred EEEehhhhHHHHHHHhhh---hheeEEecCC-----CHHHHHHhccCcchhhhhccccccceEEEEEEeeccCCCccccc
Confidence 999998888888777766 5566666655 7778877764432 477888888899999999
Q ss_pred HHHHHHHHhcCcEEEEecccccCccc---------cccCcccccEEEeccccccCCCCceEEEEecCCCCccccccccCC
Q psy8850 156 LEIGELCRSKGVIFHCDAAQAVGKID---------INIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGGG 226 (397)
Q Consensus 156 ~~i~~l~~~~gi~livD~a~~~~~~~---------~~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~~~~~~~~~ 226 (397)
.+|+++..+|-..||+|+.+++|... +....-.+|++++|+.-..+..| |+..++.-. ...+... +
T Consensus 253 ~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas~G-gFc~G~~~i-~~hQrLS---g 327 (467)
T KOG1358|consen 253 PEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALASGG-GFCAGKSFI-ADHQRLS---G 327 (467)
T ss_pred HHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeecccccccccC-ceeecceee-Eeeeecc---c
Confidence 99999999999999999999876642 22322368999999877555433 666664322 2111111 1
Q ss_pred ccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCC-----
Q psy8850 227 HEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFI----- 301 (397)
Q Consensus 227 ~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 301 (397)
..+.|..+.|+...-++. .++.... +-+.+.+.+......+.+.|.. ..++.+.+.+. ..++.+.+...
T Consensus 328 ~~Y~fSAslPp~la~aa~-~ai~i~~-~~p~~~~~L~~k~~~~H~~l~~-~s~~~v~~~~~---SPi~hl~l~~~~~s~e 401 (467)
T KOG1358|consen 328 SGYCFSASLPPYLAGAAI-KAILIEE-WNPEIVQPLRAKVAKFHAALSS-NSGFIVSGSPE---SPIIHLQLERSYGSRE 401 (467)
T ss_pred cceeeeccCchhhhhhHH-HHHHHHh-hCcchhhhhhccccccchhhhc-CCceEEecCcC---CceeeeeecccccchH
Confidence 223445555655444444 3444332 2244666777777778888877 66778887655 55666666541
Q ss_pred ChHHHHHHhC------CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHH
Q psy8850 302 EGESLLMAIK------DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKK 372 (397)
Q Consensus 302 ~~~~~~~~l~------~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 372 (397)
+...+.+.+. ++.+... ..+.. .+....+..|||++...++++|++++++.|+++...
T Consensus 402 ~e~~lL~eivd~~i~~~~ll~~a-----------~~~~~--~e~~~~~pSiri~~~a~~seeel~ra~~~ik~~~~~ 465 (467)
T KOG1358|consen 402 KEEKLLEEIVDKCIAEGVLLTRA-----------KYLEK--LERCPIPPSIRICVSAGMSEEELERAAELIKEVASA 465 (467)
T ss_pred HHHHHHHHHHHHHHhhcceehhh-----------hhhhh--cccCCCCCcEEEEEeCCCCHHHHHHHHHHHHHHHHh
Confidence 1222222222 3333321 12211 112223478999999999999999999999988654
No 369
>KOG0629|consensus
Probab=99.74 E-value=4.6e-16 Score=137.83 Aligned_cols=315 Identities=17% Similarity=0.224 Sum_probs=203.0
Q ss_pred hhhHHHHHHHHHHHHHHHhCCCCC-cEEEeCChhHHHHHHHHHhHhhh----------ccCCCEEEEcCCCChhhHHHHH
Q psy8850 36 GWTAEKAIEKARNEVAQLIYADPR-EIIWTSGATESNNLAIKGAAHFY----------KKRGKHIITVQTEHKSVLDSIR 104 (397)
Q Consensus 36 ~~~~~~~~~~~~~~la~~~~~~~~-~i~~~~g~t~a~~~~l~~l~~~~----------~~~g~~vl~~~~~~~s~~~~~~ 104 (397)
.+.+.....++-..+.+..|.+.+ +-+|++||+-++.-++....-.. .-|.-.+.+++.+|+|...+..
T Consensus 136 APvF~lmE~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa 215 (510)
T KOG0629|consen 136 APVFVLMEEEVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAAA 215 (510)
T ss_pred cceEEeehHHHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHHHH
Confidence 333444667788899999999875 78899999888777776543211 0123456788999999999999
Q ss_pred HHhhCCcEEEEeccCCCCCCCHHHHHHHhcC---C---ceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccC
Q psy8850 105 KLENDGFRVTYLKPKNNGLITLSQLEEKICS---D---TILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVG 178 (397)
Q Consensus 105 ~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~---~---~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~ 178 (397)
.++-.-..++.|++++.|.|++++||++|.+ + |-+|..+..++.-|...|++.|+++|++|++|++||+|.+.|
T Consensus 216 ~lg~gtd~c~~v~t~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmHvDAAwGGg 295 (510)
T KOG0629|consen 216 FLGLGTDHCIKVKTDERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKHKLWMHVDAAWGGG 295 (510)
T ss_pred HhccCCceeEEecccccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhcCEEEEeecccccc
Confidence 8844337888999999999999999999853 3 678899999999999999999999999999999999999976
Q ss_pred cc-ccc----cCcc-cccEEEeccccc-cCCCCceEEEEecCC-CCccccc----cc--cCCc-------cccccCC-CC
Q psy8850 179 KI-DIN----IQNY-KVDLMSFSAHKI-YGPKGIGALYIRRNP-RTRIEAQ----IH--GGGH-------EYGLRSG-TL 236 (397)
Q Consensus 179 ~~-~~~----~~~~-~~d~~~~s~~K~-~g~~g~g~~~~~~~~-~~~~~~~----~~--~~~~-------~~~~~~~-~~ 236 (397)
.+ +.. +... .+++++.+.||+ ..|..++.++.+.+- +...... .+ +... ......| ..
T Consensus 296 lLmS~k~R~kl~Giera~SvtwnpHK~~gaplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS~DTgdK~iQCGRh~ 375 (510)
T KOG0629|consen 296 LLMSRKHRHKLTGIERANSVTWNPHKLMGAPLQCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDVSYDTGDKAIQCGRHV 375 (510)
T ss_pred cccChhhHhhccCccccCceeecHHHhhcCcchhhHHHHHHHHHHHhhcccchhhhhccCceeecccccccchhhcCccc
Confidence 54 211 1111 589999999994 557778887776442 1111100 00 0000 0111122 12
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCC--------hHHHHH
Q psy8850 237 ATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIE--------GESLLM 308 (397)
Q Consensus 237 ~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~ 308 (397)
+..-++-++.+-. ..|+++..+++.++++++.+.|++ -+++..+.... +-.+++.|..++ ..+...
T Consensus 376 D~FKlWlmwkaKG--~~Gfe~~v~k~~~lA~yl~~~lre-r~~~~~l~~~~---pe~~nv~fw~vp~~lR~~~~~~e~~~ 449 (510)
T KOG0629|consen 376 DVFKLWLMWKAKG--TQGFEAQVDKCLRLAEYLYDRLRE-REGFEMLFELE---PEHVNVCFWYVPPSLRGWQENPERDS 449 (510)
T ss_pred cHHHHHHHHHhcc--cccHHHHHHHHHHHHHHHHHHHHh-cccceehhcCC---CceEEEeeccCchHhccCcccchhhh
Confidence 2222333322211 236888999999999999999999 77766665433 223344443211 122222
Q ss_pred HhCCcEe-------cccCccCCCCCChhhHHHhhCCCc-cccCceEEEeeCCC-CCHHHHHHHHHHHHHH
Q psy8850 309 AIKDIAV-------SSGSACTSASLEPSYVLRALGCND-ELAHSSIRFTIGRF-TTEKEIDFTIKLLKMK 369 (397)
Q Consensus 309 ~l~~i~~-------~~g~~~~~~~~~~~~~~~~~g~~~-~~~~~~iRi~~~~~-~~~~~i~~~~~~l~~~ 369 (397)
+|..|+- ..|. ..+|..+ ...++++|..++.. .+.+|+|.+++-|...
T Consensus 450 rL~kVaPkIK~~Mm~~Gt-------------~Mi~YqPl~~~~nffr~v~sn~a~~~ad~dflldEIerl 506 (510)
T KOG0629|consen 450 RLVKVAPKIKERMMKKGT-------------TMIGYQPLGDKPNFFRMVISNPALTEADLDFLLDEIERL 506 (510)
T ss_pred HHHhhCcHHHHHHHhccc-------------eeeEecccccccchhheecccchhhhhhHHHHHHHHHHh
Confidence 2221110 1110 0111111 22357899887743 6789999998877653
No 370
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.73 E-value=2.5e-15 Score=140.64 Aligned_cols=229 Identities=18% Similarity=0.170 Sum_probs=170.5
Q ss_pred HHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccC--
Q psy8850 42 AIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPK-- 119 (397)
Q Consensus 42 ~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~-- 119 (397)
.+.++++..++.+|++. ..++++|.|.|+..++++++ ++||.|+++.++|.|....+... |+.++++...
T Consensus 71 ~i~eAqe~aA~~fgAd~-tyFvvNGTS~ank~vi~a~~----~~GD~VLvdRN~HKSi~~glila---Ga~Pvyl~p~~n 142 (557)
T COG1982 71 PIKEAQELAARVFGADH-TYFVVNGTSTANKAVINAVL----TPGDKVLVDRNCHKSIHHGLILA---GATPVYLEPSRN 142 (557)
T ss_pred cHHHHHHHHHHHhCCCc-eEEEECCccHHHHHHHHhhc----CCCCEEEecCCccHHHHHHHHHc---CCceEEecCCCC
Confidence 57889999999999984 68889999999999999999 89999999999999999998777 8888888554
Q ss_pred C----CCCCCHHHHHHHhcCC--c-eEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCcc----ccc-cCcc
Q psy8850 120 N----NGLITLSQLEEKICSD--T-ILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKI----DIN-IQNY 187 (397)
Q Consensus 120 ~----~~~~d~~~l~~~i~~~--~-~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~----~~~-~~~~ 187 (397)
+ -+.++.+.+++.+.+. . +++++++++ .-|+.+++++|++.++.+++++.+|++++.... ..+ -...
T Consensus 143 p~~gi~ggI~~~~~~~~l~~~~~~~k~~vitnpT-YdGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~~~ 221 (557)
T COG1982 143 PLYGIIGGIPLETFKEALLAHPDAEKLAVITNPT-YDGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESALNG 221 (557)
T ss_pred ccccccCCCCHHHHHHHHHhChhhheeEEEecCc-cceEeecHHHHHHHHhhcCceEEhhhcCcccccccccCcchhhhc
Confidence 2 2578999999877553 3 677777664 459999999999999999999999999984321 112 1224
Q ss_pred cccEEEecccc-ccCCCCceEEEEecC-CC--CccccccccCCccccccCCCCchhHHHHHHHHHHHHHH-H---HHHHH
Q psy8850 188 KVDLMSFSAHK-IYGPKGIGALYIRRN-PR--TRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARI-E---MKEEL 259 (397)
Q Consensus 188 ~~d~~~~s~~K-~~g~~g~g~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~-~---~~~~~ 259 (397)
+.|+++.|.|| +.+....+.+.+++. .. +++...+ .-..+++|++..++++..|-..... | +....
T Consensus 222 ~~~~~tqS~HK~l~alSQaS~iHv~~~~~~~~~r~nea~------~~h~STSPsY~l~ASlD~Ar~~~~~~G~~l~~~~~ 295 (557)
T COG1982 222 GADFVTQSTHKLLAALSQASMIHVKDGRAVNHERFNEAL------MMHQSTSPSYPLMASLDVARMQEGNAGRELWQEVI 295 (557)
T ss_pred CceEEEechhhhhhhhhhhHHHhhCCCccCCHHHHHHHH------HHHccCCchHHHHHHHHHHHHhhhhhhHHHHHHHH
Confidence 78999999999 666666788888863 11 1222221 1133556777777777664443322 2 23336
Q ss_pred HHHHHHHHHHHHHHhhhcCcEEEeCCC
Q psy8850 260 KRILFLQKRLYNGLMESIEEIYINGDM 286 (397)
Q Consensus 260 ~~~~~~~~~l~~~l~~~~~~~~~~~~~ 286 (397)
+...+.++.+++...+ ++++.++.+.
T Consensus 296 ~~~i~~r~~~~~~~~~-~~~~~~~~~~ 321 (557)
T COG1982 296 DEAIDFRKALRRLINE-IGFFPVLQPE 321 (557)
T ss_pred HHHHHHHHHHHHHHHh-cCCeeecccc
Confidence 6667778888888877 7788877665
No 371
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.71 E-value=5.6e-15 Score=147.71 Aligned_cols=325 Identities=9% Similarity=0.064 Sum_probs=190.4
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCC-CCcEEEeCChhHHHHHHHHHhHhhhc---
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYAD-PREIIWTSGATESNNLAIKGAAHFYK--- 83 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~-~~~i~~~~g~t~a~~~~l~~l~~~~~--- 83 (397)
..+|++.+++.+++.+.. ... ..+ ...+...++.+.|.+..+-+ .+.++|++||++|++.+++...+.+.
T Consensus 382 h~~p~I~~Ai~~Qa~rl~-hv~----~~~-~~hepa~~LAe~L~~~~~~~~l~rVffs~sGSeAvE~AlKmA~r~y~~~~ 455 (817)
T PLN02974 382 TLQPELARAVAYAAGRYG-HVM----FPE-NVHEPALRAAELLLGGPGKGWASRVFFSDNGSTAIEVALKMAFRKFIVDH 455 (817)
T ss_pred CCCHHHHHHHHHHHhhCC-ccc----cCc-cCCHHHHHHHHHHHhccCCCCCCEEEECCchHHHHHHHHHHHHHHHHHhc
Confidence 358999999999998732 111 101 11234455666666654322 24799999999999999997654331
Q ss_pred c--------------CCCEEEEcCCCChhhHHHHHHHhhC-----Cc-E------EEEeccCC--------------C--
Q psy8850 84 K--------------RGKHIITVQTEHKSVLDSIRKLEND-----GF-R------VTYLKPKN--------------N-- 121 (397)
Q Consensus 84 ~--------------~g~~vl~~~~~~~s~~~~~~~~~~~-----g~-~------v~~v~~~~--------------~-- 121 (397)
+ .+.+||....+|++.......+... .+ . ...++... .
T Consensus 456 G~~~~~~~~~~~~~~~r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~~~~~~~~p~~~~ 535 (817)
T PLN02974 456 GFLENSGNEKRGGDLIELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRNGRWNISLPEGFS 535 (817)
T ss_pred CCCcccccccccccCCCCEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCccccccccccccCCcccc
Confidence 1 2456777777766644433333210 00 0 01111100 0
Q ss_pred ----C---C-------C------------CHHHHHHHhc--------CCceEEEEecc-cCccccccc----HHHHHHHH
Q psy8850 122 ----G---L-------I------------TLSQLEEKIC--------SDTILVSVMLV-NNEIGVIQP----ILEIGELC 162 (397)
Q Consensus 122 ----~---~-------~------------d~~~l~~~i~--------~~~~~v~~~~~-~~~tG~~~~----l~~i~~l~ 162 (397)
+ . . ..+.+++.+. +++.+|+++.+ +...|++.| ++.+.++|
T Consensus 536 ~~~~~~~~~~~~~~~~f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc 615 (817)
T PLN02974 536 SGLEGEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVC 615 (817)
T ss_pred ccccccccccccccccccccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHH
Confidence 0 0 0 0245666664 35789999985 788888776 68999999
Q ss_pred HhcCcEEEEecccc-cCcc----ccccCcccccEEEecccc-ccCC-CCceEEEEecCCCCccccccccCCccccccCCC
Q psy8850 163 RSKGVIFHCDAAQA-VGKI----DINIQNYKVDLMSFSAHK-IYGP-KGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGT 235 (397)
Q Consensus 163 ~~~gi~livD~a~~-~~~~----~~~~~~~~~d~~~~s~~K-~~g~-~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (397)
++||+++|.|+++. +|-. ..+.....+|+++++ | +.|+ ..+|+++++++..+.+..-........+.+.+.
T Consensus 616 ~~~gilLI~DEV~TGfGRtG~~fa~e~~gv~PDIi~~g--KgLtgG~~Plaa~l~~~~I~~~f~~~~~~~~~~hg~Ty~g 693 (817)
T PLN02974 616 RSRKIPVIFDEVFTGLWRLGVESAWELLGCKPDIACYA--KLLTGGLVPLAATLATEEVFEAFRGPSKLDALLHGHSYTA 693 (817)
T ss_pred HHhCCEEEEeecccCCCcccchhhHHhcCCCCCEEeec--ccccCCCCccEEEEEcHHHHHhhccccccCCcccCCCCCc
Confidence 99999999999987 2222 122233468999998 9 6554 468999999776555431000000112223333
Q ss_pred CchhHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHH----hhhcCcEEEeCCCCCCCCceEEEEecCCC-------
Q psy8850 236 LATHQIVGMGEAFRLARIE--MKEELKRILFLQKRLYNGL----MESIEEIYINGDMNNRIPHNLNISFNFIE------- 302 (397)
Q Consensus 236 ~~~~~~~~l~~al~~~~~~--~~~~~~~~~~~~~~l~~~l----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 302 (397)
+..++++..++|+.+.+. +.++.++..++.+++.+.| .+ .+.+.-+. ..+.++.+.+....
T Consensus 694 -npl~cAaala~L~~~~~~~~~~~l~~~~~~l~~~l~~~l~~~l~~-~p~V~~VR----g~Gl~~~iel~~~~~~~~~~~ 767 (817)
T PLN02974 694 -HPMGCAAAAKALQWYKDPSTNPNLIPPGSRLRELWDEELVRAISS-LPNVERVV----SLGTVLALELDAEGSGSGYSS 767 (817)
T ss_pred -CHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHhh-CCCeeEEE----eeeeEEEEEEecCCcccccch
Confidence 445555555888887652 4455566666666666555 33 33322221 12455666664211
Q ss_pred --hHHHHHHhC---CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHH
Q psy8850 303 --GESLLMAIK---DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKV 370 (397)
Q Consensus 303 --~~~~~~~l~---~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~ 370 (397)
...+...+. |+.+++. ++.||+.++..+++++++++++.|.+.+
T Consensus 768 ~~a~~v~~~~~~~~Gl~~r~~------------------------Gnvi~l~pP~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 768 LYARSVVRRLRREDGIYARPL------------------------GNVVYLMCGPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred HHHHHHHHHHHHhCCEEEEec------------------------CCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 112322222 5555431 2789999999999999999999998764
No 372
>KOG1401|consensus
Probab=99.69 E-value=3.4e-14 Score=125.93 Aligned_cols=249 Identities=18% Similarity=0.161 Sum_probs=158.7
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCC-CCCcEEEeCChhHHHHHHHHHhHhhhccC
Q psy8850 7 TPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYA-DPREIIWTSGATESNNLAIKGAAHFYKKR 85 (397)
Q Consensus 7 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~i~~~~g~t~a~~~~l~~l~~~~~~~ 85 (397)
++..|++.+++.+...+. .|..+.....-..++.+.|.+..+- ..+.|+|++|||+|++.+++...... ..
T Consensus 71 Ghanpev~ral~~q~~k~-------~hs~~~~~t~eav~l~~~l~~~~~~~~~~rvff~nsGTeAne~ALK~Ark~~-~~ 142 (433)
T KOG1401|consen 71 GHANPEVARALAEQAKKL-------GHSSNGYFTLEAVELEEVLSAVLGKGSAERVFFCNSGTEANETALKFARKFT-GK 142 (433)
T ss_pred CCCCHHHHHHHHHHHhhh-------eeccCccccHHHHHHHHHHHhcccCCCccEEEEecCCcHHHHHHHHHHHHhh-cc
Confidence 456899999999988773 2222222222255666777666642 45689999999999999999655432 22
Q ss_pred C-----CEEEEcCCCChh-hHHHHHHHhhCCcEEEEecc---CCC----CCCCHHHHHHHhcCC---ceEEEEecccCcc
Q psy8850 86 G-----KHIITVQTEHKS-VLDSIRKLENDGFRVTYLKP---KNN----GLITLSQLEEKICSD---TILVSVMLVNNEI 149 (397)
Q Consensus 86 g-----~~vl~~~~~~~s-~~~~~~~~~~~g~~v~~v~~---~~~----~~~d~~~l~~~i~~~---~~~v~~~~~~~~t 149 (397)
+ ..++....+|++ ...++..... .-...|. .++ -.-|..++++.++.. +.+|+++.++...
T Consensus 143 ~~~~~~t~~Iaf~nsyHG~tlgals~~~~---s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~~h~~~IaAVIvEPiqGaG 219 (433)
T KOG1401|consen 143 KHPEKKTKFIAFENSYHGRTLGALSVTGN---SKYGLPFDPIAPDVVTAEYNDSTALEKLFESHKGEIAAVIVEPIQGAG 219 (433)
T ss_pred cCCccceeEEEEecCcCCcchhHHHhhcc---cccCCCCCCCCCceeecccCCHHHHHHHHHhCCCceEEEEEecccCCC
Confidence 2 236666555554 4444443311 1111111 111 123789999999764 5899999999888
Q ss_pred ccccc----HHHHHHHHHhcCcEEEEeccccc-Cccc----cccCcccccEEEecccc-ccCCCCceEEEEecCCCCccc
Q psy8850 150 GVIQP----ILEIGELCRSKGVIFHCDAAQAV-GKID----INIQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIE 219 (397)
Q Consensus 150 G~~~~----l~~i~~l~~~~gi~livD~a~~~-~~~~----~~~~~~~~d~~~~s~~K-~~g~~g~g~~~~~~~~~~~~~ 219 (397)
|.... +..|..+|+++|+++|.|+++.. +... ...-...+|+.++. | +.|+..+|+.+++++..+.+.
T Consensus 220 G~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~~PDI~t~a--K~L~gGlPigA~~v~~kV~~~i~ 297 (433)
T KOG1401|consen 220 GIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFGVTPDITTVA--KPLGGGLPIGATGVRDKVAEMIS 297 (433)
T ss_pred CcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHHHHHHhCcCCcceeeh--hhccCCceeEEEeehHHHHhhcC
Confidence 87655 57899999999999999999873 3221 11122368988887 9 766677999999988777765
Q ss_pred cccc---cCCccccccCCCCchhHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhh
Q psy8850 220 AQIH---GGGHEYGLRSGTLATHQIVGMGEAFRLARI--EMKEELKRILFLQKRLYNGLME 275 (397)
Q Consensus 220 ~~~~---~~~~~~~~~~~~~~~~~~~~l~~al~~~~~--~~~~~~~~~~~~~~~l~~~l~~ 275 (397)
+--+ |+ ..+ -|...+.+-..+++++.+ .+.+..+.-+.+++.+.+.+.+
T Consensus 298 ~~~~l~hg~------Tf~-gnpLacsa~~~~l~~l~~~e~~k~vs~~~k~L~~~l~e~~~~ 351 (433)
T KOG1401|consen 298 PGDHLYHGG------TFS-GNPLACSAGIKVLDELKDPETLKNVSKIGKELRKLLDEYLKK 351 (433)
T ss_pred CCCccccCc------ccC-CChhhhhHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 4332 32 122 233444445567777754 3555566666666677777666
No 373
>KOG0258|consensus
Probab=99.68 E-value=1.9e-14 Score=126.28 Aligned_cols=294 Identities=17% Similarity=0.140 Sum_probs=179.5
Q ss_pred CCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHh----C--CCCCcEEEeCChhHHHHHHHHHhHhhh
Q psy8850 9 IDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLI----Y--ADPREIIWTSGATESNNLAIKGAAHFY 82 (397)
Q Consensus 9 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~--~~~~~i~~~~g~t~a~~~~l~~l~~~~ 82 (397)
.|..+++.....+....+ ... .|+. .+.++-+|+..|++. | +++++|++|.|++.|+..++..+..
T Consensus 87 fp~Dai~RA~~~L~~~gG-s~G-aYS~----SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~-- 158 (475)
T KOG0258|consen 87 FPTDAIKRAKRILNDCGG-SLG-AYSD----SQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIA-- 158 (475)
T ss_pred CCHHHHHHHHHHHHhcCC-ccc-cccc----ccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhc--
Confidence 466677777777777554 111 3333 334455555555554 4 3567899999999999999998886
Q ss_pred ccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccC--CCCCCCHHHHHHHhcC-----CceEEEEecccCccccccc-
Q psy8850 83 KKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPK--NNGLITLSQLEEKICS-----DTILVSVMLVNNEIGVIQP- 154 (397)
Q Consensus 83 ~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~i~~-----~~~~v~~~~~~~~tG~~~~- 154 (397)
.+++-|+++-|.||-+...+..+ |...+.+.++ .++.+|.++|++.+.+ +++++++-+|.||||.+.+
T Consensus 159 -~~~~GvliPiPQYPLYsAti~l~---~~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~ 234 (475)
T KOG0258|consen 159 -GKKTGVLIPIPQYPLYSATISLL---GGTQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSE 234 (475)
T ss_pred -CCCCceEeecCCCchhHHHHHHh---CCcccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcH
Confidence 67899999999999999888887 7776666555 4678999999988764 6889999999999999877
Q ss_pred --HHHHHHHHHhcCcEEEEecccc-----cCcc-------ccccCcccc-c---EEEecccc-cc---CCCCceEEEEec
Q psy8850 155 --ILEIGELCRSKGVIFHCDAAQA-----VGKI-------DINIQNYKV-D---LMSFSAHK-IY---GPKGIGALYIRR 212 (397)
Q Consensus 155 --l~~i~~l~~~~gi~livD~a~~-----~~~~-------~~~~~~~~~-d---~~~~s~~K-~~---g~~g~g~~~~~~ 212 (397)
+++|..+|+++|+.++.|++|- .++- -..+..... . +-..|.|| .. |..| |++=+-.
T Consensus 235 e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RG-GYmEv~n 313 (475)
T KOG0258|consen 235 ENIEGIICFAAEEGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRG-GYMESLN 313 (475)
T ss_pred HHHHHHHHHHHHcCeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccC-Ceeeccc
Confidence 7889999999999999999874 1110 011111122 1 22346667 43 4443 5544321
Q ss_pred ---CCCCcc--------ccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEE
Q psy8850 213 ---NPRTRI--------EAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIY 281 (397)
Q Consensus 213 ---~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 281 (397)
+....+ .+...|- ....... .++.++- ...+....+-+.+.+.++.++..+.+.+.. +.|+.
T Consensus 314 ~~prv~~qi~Kl~si~lc~~V~GQ-~~vdl~V-nPP~Pgd----~Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns-~~gi~ 386 (475)
T KOG0258|consen 314 RDPRVKQQIKKLASIKLCPQVSGQ-KLVDLVV-NPPKPGD----PSYDLFSSEKDGILSSLRSRAKLTEDAFNS-LEGIS 386 (475)
T ss_pred CChhHHHHHHHHHhhhhcCCccch-hhhceec-CCCCCCC----cchhhhhhhhHhHHHHHHHHhHHHHHHHhh-cCcee
Confidence 111111 0111000 0000000 0111110 112222234466778888889999999999 99988
Q ss_pred EeCCCCCCCCceEEEEec----------CCChHH-HHHHhC---CcEecccCccCC
Q psy8850 282 INGDMNNRIPHNLNISFN----------FIEGES-LLMAIK---DIAVSSGSACTS 323 (397)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~----------~~~~~~-~~~~l~---~i~~~~g~~~~~ 323 (397)
+...++. +..+-.+.++ +..+.. ....|. ||++.||+.|..
T Consensus 387 cn~~qGA-MY~fP~i~lP~kaie~A~~~~~~PD~FYc~~LLe~tGIcvVPGSGFGQ 441 (475)
T KOG0258|consen 387 CNPVQGA-MYLFPQISLPPKAIEAAKALGIAPDEFYCLKLLEATGICVVPGSGFGQ 441 (475)
T ss_pred eccCccc-eeecccccCCHHHHHHHHHhCCCCcHHHHHHHHHhcCeEEecCCCCCC
Confidence 8866442 1111112222 111122 223333 999999987765
No 374
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.68 E-value=1.6e-13 Score=122.63 Aligned_cols=296 Identities=18% Similarity=0.165 Sum_probs=205.2
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHHhhC-CcEEEEeccC
Q psy8850 41 KAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLEND-GFRVTYLKPK 119 (397)
Q Consensus 41 ~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~-g~~v~~v~~~ 119 (397)
+.+.+++..++++.|.+..+--+-.++|.+-++++++..... +++++++|+...||.+...+...... |++++.++.+
T Consensus 120 qaLfefQtlv~dLTGm~VANASm~DeaTAaAEAm~ma~r~~k-~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~ 198 (450)
T COG0403 120 EALFEFQTLVADLTGLDVANASMLDEATAAAEAMLMAKRVTK-KKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDAD 198 (450)
T ss_pred HHHHHHHHHHHHHhCCCcccchhhhhHHHHHHHHHHHHHhhc-CcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccc
Confidence 567788999999999998888888999988888888765422 33689999999999999999877654 8999988887
Q ss_pred CCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEeccc-ccCccccccCcccccEEEecccc
Q psy8850 120 NNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQ-AVGKIDINIQNYKVDLMSFSAHK 198 (397)
Q Consensus 120 ~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~-~~~~~~~~~~~~~~d~~~~s~~K 198 (397)
|+++++++...++..+++.+|++-.+...+++.+.+.+|++|+++++=.-. +.+.+ -....+++|+++++.+-
T Consensus 199 -----d~~~l~~~~~~~~~gv~vQyP~~~G~~~~d~~~l~~~~h~~~al~~v~aDplaL~LL-~pPGe~GADIvvG~~Qr 272 (450)
T COG0403 199 -----DLDDLESADDGDVFGVLVQYPNTFGIVEEDLRALIEAAHSAGALVIVAADPLALGLL-KPPGEFGADIVVGSAQR 272 (450)
T ss_pred -----hhhhhhhccccCeEEEEEecCCCCCccchhHHHHHHHHhhcCCEEEEEechhHhhcc-CCccccCCceEEecCcc
Confidence 889999883347899999999755436777999999999999987765332 22222 23456699999999998
Q ss_pred cc-----CCCCceEEEEecCCCCccccccccC------C-----------ccccccCCCCchhH---HHHHHHHHHHH--
Q psy8850 199 IY-----GPKGIGALYIRRNPRTRIEAQIHGG------G-----------HEYGLRSGTLATHQ---IVGMGEAFRLA-- 251 (397)
Q Consensus 199 ~~-----g~~g~g~~~~~~~~~~~~~~~~~~~------~-----------~~~~~~~~~~~~~~---~~~l~~al~~~-- 251 (397)
++ |++-+|++.++++....+.-.+.|- . +..+..-.|+|... +.++.+++-..
T Consensus 273 fGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA~~As~y~~~h 352 (450)
T COG0403 273 FGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTNQALLALAASMYAVYH 352 (450)
T ss_pred cCCCcCCCCcceeeeeEhHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHHh
Confidence 63 3333789999877655544333321 1 11223345666542 34444444322
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCChHHHHHHh-C-CcEecccCccCCCCCCh
Q psy8850 252 -RIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAI-K-DIAVSSGSACTSASLEP 328 (397)
Q Consensus 252 -~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~-~i~~~~g~~~~~~~~~~ 328 (397)
.+|+.++.++..++..++.++|++.-.++.+... .+..-+.+.++......+..+. . |+.+..-
T Consensus 353 Gp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~~---~fFdt~~v~~~~~~~~~l~~~~~~~G~~L~~~---------- 419 (450)
T COG0403 353 GPQGLKEIAERIHRLAAYLAAGLKEIGAGVELVFD---HFFDTFTVRVPEEVAEALLAAAIAGGINLRRV---------- 419 (450)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhcCCceEeccc---cceeeEEEecchhHHHHHHHHHHhcCCceeee----------
Confidence 4589999999999999999999971135666654 1123344555432233333332 2 4444321
Q ss_pred hhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHH
Q psy8850 329 SYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (397)
Q Consensus 329 ~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 369 (397)
....+-+++...+++++|+.+++.+...
T Consensus 420 -------------~~~~~~ia~tEt~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 420 -------------DADTVLIALTETTTKEDIDALVAAFGGV 447 (450)
T ss_pred -------------cCCceEEEeecccCHHHHHHHHHHHhhh
Confidence 1246788999889999999999988764
No 375
>KOG2040|consensus
Probab=99.68 E-value=2.3e-14 Score=133.07 Aligned_cols=313 Identities=13% Similarity=0.168 Sum_probs=210.7
Q ss_pred HHHHHHHHHHHHHHHhCCCCCcEEEeC-ChhHHHHHHHHHhHhhh----ccCCCEEEEcCCCChhhHHHHHHHhhCCcEE
Q psy8850 39 AEKAIEKARNEVAQLIYADPREIIWTS-GATESNNLAIKGAAHFY----KKRGKHIITVQTEHKSVLDSIRKLENDGFRV 113 (397)
Q Consensus 39 ~~~~~~~~~~~la~~~~~~~~~i~~~~-g~t~a~~~~l~~l~~~~----~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v 113 (397)
..+.+.++++.|++..|.+ .+-|.+ +|.++-.+-+..+.... ...+..++++...|+++-.+++++ |.+|
T Consensus 580 Y~~lf~~Le~~Lc~iTG~D--~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPASA~Ma---gmkv 654 (1001)
T KOG2040|consen 580 YQQLFTELEKDLCEITGFD--SFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPASAAMA---GMKV 654 (1001)
T ss_pred HHHHHHHHHHHhheeeccc--ceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChhhHHhc---CCEE
Confidence 3568889999999999987 455544 44444444444333211 233478999999999999999998 9999
Q ss_pred EEeccCCCCCCCHHHHHHHhcC---CceEEEEecccCccccc-ccHHHHHHHHHhcCcEEEEecccccCcccc-ccCccc
Q psy8850 114 TYLKPKNNGLITLSQLEEKICS---DTILVSVMLVNNEIGVI-QPILEIGELCRSKGVIFHCDAAQAVGKIDI-NIQNYK 188 (397)
Q Consensus 114 ~~v~~~~~~~~d~~~l~~~i~~---~~~~v~~~~~~~~tG~~-~~l~~i~~l~~~~gi~livD~a~~~~~~~~-~~~~~~ 188 (397)
+.|.++.+|.+|..+|+++.++ +-.++.+++|++. |+. ..++++.++.|+||.-|..|++..-..+.+ ...+++
T Consensus 655 vpV~~~~~G~id~~dLk~kaekh~~~Laa~MvTYPST~-GvfE~~i~d~cd~iHehGGQVYlDGANMNAqVGlc~pGd~G 733 (1001)
T KOG2040|consen 655 VPVGCDANGNIDMVDLKAKAEKHKDNLAALMVTYPSTH-GVFEEGIDDICDIIHEHGGQVYLDGANMNAQVGLCRPGDIG 733 (1001)
T ss_pred EEeeccCCCCccHHHHHHHHHHhhhhhheeEEeccccc-ccccccHHHHHHHHHhcCCEEEecCCCccceecccCCcccc
Confidence 9999999999999999998765 5678889988766 554 459999999999999999999976333221 234558
Q ss_pred ccEEEecccc-cc-----CCCCceEEEEecCCCCccc--cccccCCccc----cccCCCCc-hhHHHH-HHHHHHHHH-H
Q psy8850 189 VDLMSFSAHK-IY-----GPKGIGALYIRRNPRTRIE--AQIHGGGHEY----GLRSGTLA-THQIVG-MGEAFRLAR-I 253 (397)
Q Consensus 189 ~d~~~~s~~K-~~-----g~~g~g~~~~~~~~~~~~~--~~~~~~~~~~----~~~~~~~~-~~~~~~-l~~al~~~~-~ 253 (397)
.|+.-..+|| ++ |++|+|-+.+++.+...+. ++...+.... +.-+..|- ...++. .++.++.+- .
T Consensus 734 aDV~HLNLHKTFcIPHGGGGPg~gPIgVK~HLapfLP~HpVvs~~~~~~~~~~gsVsaaP~Gsa~ILpISwaYikmMG~~ 813 (1001)
T KOG2040|consen 734 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSPGRPEDTSPVGSVSAAPWGSALILPISWAYIKMMGSG 813 (1001)
T ss_pred ccceeecccceeeecCCCCCCCCCccchhhhccccCCCCCccCCCCCCCCCCccceeccCCCcceeehhHHHHHHHhccc
Confidence 9999999999 62 4556888888877665542 2221111111 11111110 111222 234555543 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEec------CCChHHHHHHhC--CcEecccCccCCCC
Q psy8850 254 EMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFN------FIEGESLLMAIK--DIAVSSGSACTSAS 325 (397)
Q Consensus 254 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~--~i~~~~g~~~~~~~ 325 (397)
|++.-.+...-++.++.++|+.+++ +-..+. .....+-+.+..+ ++++.+++++|. |+....-++..
T Consensus 814 GL~~as~~AiLNaNYMakRLe~hYk-il~~~~-~~~vaHEFIlD~r~fK~~agieavDvAKRL~DYgFHaPTmswPV--- 888 (1001)
T KOG2040|consen 814 GLKDASKIAILNANYMAKRLESHYK-ILFRGE-NGLVAHEFILDLRPFKKTAGIEAVDVAKRLMDYGFHAPTMSWPV--- 888 (1001)
T ss_pred ccchhhHHHhhhhHHHHHHHhhccc-eeEecC-CcceeeeeeeechhhccccCCcHHHHHHHHHhccCCCCcccccc---
Confidence 5677777777889999999988333 222232 2233444455443 366778888887 33222221111
Q ss_pred CChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHHHhcCcc
Q psy8850 326 LEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKLRELSPL 379 (397)
Q Consensus 326 ~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~ 379 (397)
.+.+-|-++...+.+++|+++++|-.+-++++++..+
T Consensus 889 -----------------~gtLMIEPTESE~k~ElDRfcdAliSIreEI~~ie~G 925 (1001)
T KOG2040|consen 889 -----------------AGTLMIEPTESEDKAELDRFCDALISIREEIAQIEEG 925 (1001)
T ss_pred -----------------CCceEeccCccccHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 2778888888889999999999999999999987766
No 376
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.67 E-value=2.1e-14 Score=136.27 Aligned_cols=248 Identities=16% Similarity=0.127 Sum_probs=143.1
Q ss_pred CCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccC
Q psy8850 6 TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKR 85 (397)
Q Consensus 6 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~ 85 (397)
.+..+|.|.+++++++.... .+ . .......++.+.|++++.. .+.+.|++||++|++.+++.. +.++++
T Consensus 62 lGh~~p~v~~Ai~~q~~~~~------~~--~-~~~~~~~~la~~l~~~~p~-~~~v~f~~sGseA~e~AlklA-r~~tgr 130 (431)
T PRK06209 62 LGHAYPPVVEAVREALQDGC------NF--T-RPSAIELDAAESFLELIDG-ADMVKFCKNGSDATSAAVRLA-RAYTGR 130 (431)
T ss_pred cCCCCHHHHHHHHHHHHhCc------CC--C-CCCHHHHHHHHHHHHhCCc-cceEEEecCHHHHHHHHHHHH-HHHhCC
Confidence 34568999999999998632 11 1 1122344677788887742 247999999999999999954 444343
Q ss_pred CCEEEEc-CCCChhhHHHHHH--HhhCCc------EEEEeccCCCCCCCHHHHHHHhc---CCceEEEEecccCcccccc
Q psy8850 86 GKHIITV-QTEHKSVLDSIRK--LENDGF------RVTYLKPKNNGLITLSQLEEKIC---SDTILVSVMLVNNEIGVIQ 153 (397)
Q Consensus 86 g~~vl~~-~~~~~s~~~~~~~--~~~~g~------~v~~v~~~~~~~~d~~~l~~~i~---~~~~~v~~~~~~~~tG~~~ 153 (397)
.+|+.. ...|++....... ....+. .+..++ .-|++++++++. +++.+|+++......+..-
T Consensus 131 -~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~~-----~~d~~~l~~~l~~~~~~~aavi~Epv~g~~~~~~ 204 (431)
T PRK06209 131 -DLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTFR-----YNDIASLEALFEDHPGRIACVILEPATADEPQDG 204 (431)
T ss_pred -CeEEEeccCccccccccccccCCCCCCCChhHhccccccC-----CCCHHHHHHHHHhCCCCEEEEEEccccCCCCCHH
Confidence 456554 2333321110000 000011 011112 227899998885 3567888887654322222
Q ss_pred cHHHHHHHHHhcCcEEEEecccccCccc---cc-cCcccccEEEecccc-ccCCCCceEEEEecCCCCc--cccccccCC
Q psy8850 154 PILEIGELCRSKGVIFHCDAAQAVGKID---IN-IQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTR--IEAQIHGGG 226 (397)
Q Consensus 154 ~l~~i~~l~~~~gi~livD~a~~~~~~~---~~-~~~~~~d~~~~s~~K-~~g~~g~g~~~~~~~~~~~--~~~~~~~~~ 226 (397)
.+++|.++|++||+++|+|+++...... .. .....+|+++++ | +.|+..+|++.++++.... +...-....
T Consensus 205 ~l~~l~~lc~~~g~lLI~DEv~tG~~~~~~g~~~~~gv~PDi~t~g--K~lggG~p~~av~~~~~i~~~~~~~~~~~~~~ 282 (431)
T PRK06209 205 FLHEVRRLCHENGALFILDEMITGFRWHMRGAQKLYGIVPDLSCFG--KALGNGFAVSALAGKREYMELGGLEHTDRERV 282 (431)
T ss_pred HHHHHHHHHHHcCCEEEEEcccccCCcCcchhhHHhCCCcceeeeh--hhhcCCcccEEEEEHHHHHhhhcccccCCCCc
Confidence 3899999999999999999998521111 01 112357887766 9 6554446888888665443 110000000
Q ss_pred ccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy8850 227 HEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLME 275 (397)
Q Consensus 227 ~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~ 275 (397)
... ....++|...+++..++++.+.+. .+.++..++.+++++.|++
T Consensus 283 ~~~-~~T~~~np~~~aaa~a~l~~i~~~--~~~~~~~~~g~~l~~~L~~ 328 (431)
T PRK06209 283 FLL-STTHGAETHALAAAIATMAIYRDE--DVIERLHEQGAKLAAGVNE 328 (431)
T ss_pred eee-ccCCCCCHHHHHHHHHHHHHHhcc--CHHHHHHHHHHHHHHHHHH
Confidence 000 111234556677777888888652 4566666667777776654
No 377
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.65 E-value=2.5e-14 Score=131.44 Aligned_cols=252 Identities=18% Similarity=0.203 Sum_probs=156.2
Q ss_pred CCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHh-----
Q psy8850 6 TTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAH----- 80 (397)
Q Consensus 6 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~----- 80 (397)
.+..+|.+.+++++++....- ... .....+...++.+.|.+.++-..+.+.|++||++|++.+++....
T Consensus 30 lGh~~p~i~~ai~~~~~~~~~-~~~-----~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGseAve~Alkla~~~~~~~ 103 (339)
T PF00202_consen 30 LGHNHPEIAEAIAEQANKLNY-VSF-----SGFTHPEAAELAEKLAELFPGGLDRVFFANSGSEAVEAALKLARQYHNKR 103 (339)
T ss_dssp T-BT-HHHHHHHHHHHHHCSS-CST-----TTSEEHHHHHHHHHHHHHSSTTEEEEEEESSHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCccccchhHHHHhhhccc-ccc-----cceeccchhhhhhhhhhccccccceeeeccCchHHHHHHHHHhhcccccc
Confidence 445689999999998876321 110 112234567788888898854445799999999999999997651
Q ss_pred hhccCCCEEEEcCCCChhhHHHHHHHhh-----C-----CcEEEEeccCCCCC-----CCHHHHHH----HhcCCceEEE
Q psy8850 81 FYKKRGKHIITVQTEHKSVLDSIRKLEN-----D-----GFRVTYLKPKNNGL-----ITLSQLEE----KICSDTILVS 141 (397)
Q Consensus 81 ~~~~~g~~vl~~~~~~~s~~~~~~~~~~-----~-----g~~v~~v~~~~~~~-----~d~~~l~~----~i~~~~~~v~ 141 (397)
.. ..+.+|+....+|++.......+.. . ...+..+|.++... -..+.+++ ...+++.+|+
T Consensus 104 ~~-~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi 182 (339)
T PF00202_consen 104 AY-TGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAALNADEIAAVI 182 (339)
T ss_dssp HH-HTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEE
T ss_pred cc-cCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccchhhhHHHHHHHHHHHHHhhcCCcEEEEE
Confidence 22 3446788777777665433333210 0 12345666652110 00111222 2245688999
Q ss_pred EecccCccccccc----HHHHHHHHHhcCcEEEEecccccC-cc----ccccCcccccEEEecccc-ccCCCCceEEEEe
Q psy8850 142 VMLVNNEIGVIQP----ILEIGELCRSKGVIFHCDAAQAVG-KI----DINIQNYKVDLMSFSAHK-IYGPKGIGALYIR 211 (397)
Q Consensus 142 ~~~~~~~tG~~~~----l~~i~~l~~~~gi~livD~a~~~~-~~----~~~~~~~~~d~~~~s~~K-~~g~~g~g~~~~~ 211 (397)
++.++...|...+ +++|.++|++||+++|+|+++... .. ..+...+.+|+++++ | +.|+..+|.++++
T Consensus 183 vEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~a~~~~gv~PDiv~~g--K~l~gG~p~sav~~~ 260 (339)
T PF00202_consen 183 VEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFFASEHYGVDPDIVTFG--KGLGGGLPISAVLGS 260 (339)
T ss_dssp EESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSSGHHHHTSSSSEEEEE--GGGGTTSSEEEEEEE
T ss_pred EeccccccCccccccchhhehcccccccccceecccccccccccCCccceecccccCcccccc--cchhhhhhccccccc
Confidence 9999988887665 689999999999999999998732 21 122234478999998 9 6665678999999
Q ss_pred cCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy8850 212 RNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLME 275 (397)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~ 275 (397)
++....+.+...+ .+.+ -+...+++..++++.+.+ .++.++..++.++|.+.|++
T Consensus 261 ~~i~~~~~~~~~~------~T~~-g~p~~~aaa~~~l~~~~~--~~~~~~~~~~g~~l~~~L~~ 315 (339)
T PF00202_consen 261 EEIMEAFQPGSHG------STFG-GNPLSCAAALATLEILEE--EDLLERVRELGERLREGLRE 315 (339)
T ss_dssp HHHHTTSCTTSST------CTTT-T-HHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHH
T ss_pred chhhccccccccc------cccc-cchHhhhhhhhHHHhhcc--HHHHHHHHHHHHHHHHHHHH
Confidence 8765555333221 1222 234455555578887766 33455556666666665554
No 378
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.65 E-value=7.4e-14 Score=127.72 Aligned_cols=329 Identities=16% Similarity=0.132 Sum_probs=198.7
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCC
Q psy8850 8 PIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGK 87 (397)
Q Consensus 8 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~ 87 (397)
.|+++..++|.. ++. .| ...+...++++..++++|.+ .+++|.++..+..++...++. .+|+
T Consensus 54 apS~~m~aAM~~------GDD---~Y----~gdpSv~~Lee~vael~G~E--~alpthqGRgaE~Il~~~~~~---~~g~ 115 (467)
T TIGR02617 54 AVTQSMQAAMMR------GDE---AY----SGSRSYYALAESVKNIFGYQ--YTIPTHQGRGAEQIYIPVLIK---KREQ 115 (467)
T ss_pred CCCHHHHHHHHc------CCc---cc----ccCchHHHHHHHHHHHhCCc--eEEECCCCchHHHHHHHhhcc---cccc
Confidence 478888888875 111 11 22335678999999999988 688999999999988888872 2566
Q ss_pred EEEEcC-------CCChh-hHHHHHHHhhCCcEEEEecc----------CCCCCCCHHHHHHHhcC----CceEEEEecc
Q psy8850 88 HIITVQ-------TEHKS-VLDSIRKLENDGFRVTYLKP----------KNNGLITLSQLEEKICS----DTILVSVMLV 145 (397)
Q Consensus 88 ~vl~~~-------~~~~s-~~~~~~~~~~~g~~v~~v~~----------~~~~~~d~~~l~~~i~~----~~~~v~~~~~ 145 (397)
++.+.. ..|.. ........ |..++.++. +..|.+|+++++++|.+ +...+..+-.
T Consensus 116 e~g~~~~~~~v~hn~~fett~g~a~l~---G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v~~tlt 192 (467)
T TIGR02617 116 EKGLDRSKMVAFSNYFFDTTQGHSQIN---GCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATIT 192 (467)
T ss_pred cccccccccccceEEEEecchHHHHHc---CceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceeeeeeEE
Confidence 555333 22222 33333444 777776532 23588999999999974 3344433333
Q ss_pred cCc-cccccc---HHHHHHHHHhcCcEEEEeccccc-----------CccccccC------cccccEEEecccc-ccCCC
Q psy8850 146 NNE-IGVIQP---ILEIGELCRSKGVIFHCDAAQAV-----------GKIDINIQ------NYKVDLMSFSAHK-IYGPK 203 (397)
Q Consensus 146 ~~~-tG~~~~---l~~i~~l~~~~gi~livD~a~~~-----------~~~~~~~~------~~~~d~~~~s~~K-~~g~~ 203 (397)
+|. .|.+.| ++++.++|++||+++++|++--+ +....+.. .-.+|.+++|++| ++.|.
T Consensus 193 ~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKglgApv 272 (467)
T TIGR02617 193 CNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDAMVPM 272 (467)
T ss_pred EecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCCCCcc
Confidence 343 577787 46788999999999999986321 11111111 1268999999999 77787
Q ss_pred CceEEEEecCCC----CccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCc
Q psy8850 204 GIGALYIRRNPR----TRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEE 279 (397)
Q Consensus 204 g~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 279 (397)
| |++.++++.. .+.+....- .....+.|+.+..-+-++...|+...+ ..+.+.-....++|.+.|.+ .|
T Consensus 273 G-g~Lag~d~~~~~l~~~~~~~~i~--~EGf~tYGGlagrd~ea~a~Gl~e~~~--~~yl~~ri~qv~yl~~~L~~--~G 345 (467)
T TIGR02617 273 G-GLLCFKDDSFFDVYTECRTLCVV--QEGFPTYGGLEGGAMERLAVGLYDGMN--LDWLAYRINQVQYLVNGLEE--IG 345 (467)
T ss_pred c-ceEEecchhHHHHHHHHHhhccc--ccCCcCcCchhHHHHHHHHhhhhhccc--HHHHHHHHHHHHHHHHHHHh--CC
Confidence 6 8888887621 111211110 112234566666777777666665533 34445555567788888888 67
Q ss_pred EEEeCCCCCCCCceEEEEe----cCC-----ChHHHHHHhC---CcE-ecccCccCCCCCChhhHHHhhCCCcccc--Cc
Q psy8850 280 IYINGDMNNRIPHNLNISF----NFI-----EGESLLMAIK---DIA-VSSGSACTSASLEPSYVLRALGCNDELA--HS 344 (397)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~----~~~-----~~~~~~~~l~---~i~-~~~g~~~~~~~~~~~~~~~~~g~~~~~~--~~ 344 (397)
+.+.. .+ ++.+.+.. +.+ ++..+...|- ||. +.-|+.......+.. .... -.
T Consensus 346 vpi~~-~G---ghav~iDa~~~lphip~~~fpa~al~~~ly~~~GiR~~e~G~~~~~rd~~~~---------~~~~~~~e 412 (467)
T TIGR02617 346 VVCQQ-AG---GHAAFVDAGKLLPHIPADQFPAHALACELYKVAGIRAVEIGSLLLGRDPKTG---------KQLPCPAE 412 (467)
T ss_pred CcEEe-cC---ccEEEEehhhhCCCCChhhCcHHHHHHHHHHHcCcceEeecceecccCCCCC---------ccCCCccc
Confidence 77665 33 33433321 222 2344444443 432 222322111000000 0111 26
Q ss_pred eEEEeeC-CCCCHHHHHHHHHHHHHHHHHHHhcC
Q psy8850 345 SIRFTIG-RFTTEKEIDFTIKLLKMKVKKLRELS 377 (397)
Q Consensus 345 ~iRi~~~-~~~~~~~i~~~~~~l~~~~~~~~~~~ 377 (397)
.+|+.++ -.-|.+.+|..+++|..+.++-..+.
T Consensus 413 l~RlaipRrvyt~~h~d~v~~~~~~~~~~~~~i~ 446 (467)
T TIGR02617 413 LLRLTIPRATYTQTHMDFIIEAFKHVKENAPNIK 446 (467)
T ss_pred eeeeccccccccHhHHHHHHHHHHHHHhhhhhcC
Confidence 7999987 33579999999999998887665544
No 379
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=99.62 E-value=2.2e-16 Score=140.30 Aligned_cols=251 Identities=18% Similarity=0.228 Sum_probs=53.6
Q ss_pred CCCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhcc
Q psy8850 5 ATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKK 84 (397)
Q Consensus 5 ~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~ 84 (397)
+.++.++++.+++.+....+. |-...... +.. ......+++.++++.|++ ..+++++...|+.+++.++.
T Consensus 14 GRs~l~~~a~~a~~~~a~~Y~-nLE~dl~~-G~R-g~R~~~v~~ll~~ltgAe--aA~VvNnnaAAv~L~l~~la----- 83 (367)
T PF03841_consen 14 GRSPLSEEAIEAVAEVASGYS-NLEYDLET-GKR-GSRYAHVEELLCELTGAE--AALVVNNNAAAVLLALNTLA----- 83 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccccc-cccccccc-ccc-cccccccccccccccccc--cccccccccccccccccccc-----
Confidence 345778899999888766522 22110111 111 123566888899999987 56777888889999999886
Q ss_pred CCCEEEEcCCCChhhHHHHH---HHhhCCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCc--cccc--ccHHH
Q psy8850 85 RGKHIITVQTEHKSVLDSIR---KLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNE--IGVI--QPILE 157 (397)
Q Consensus 85 ~g~~vl~~~~~~~s~~~~~~---~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~--tG~~--~~l~~ 157 (397)
++.+|+++..+-..+..+++ .+...|.+++.|... +...+++++++|+++|.+++..|.+|. .|+. .++++
T Consensus 84 ~~~EvIvsRGelVeiGgsFRip~vm~~sGa~lvEVGtt--N~t~~~Dye~AI~e~Ta~ll~Vh~Sn~~i~GFt~~~~~~e 161 (367)
T PF03841_consen 84 KGKEVIVSRGELVEIGGSFRIPDVMRQSGARLVEVGTT--NRTHLSDYEKAITENTAALLKVHTSNFRIQGFTGEVSLEE 161 (367)
T ss_dssp -------------------------------------------------------------------------------H
T ss_pred cccccccccccccccccccccccccccccccccccccc--cccccccccccccccccccccccccccccccccccccHHH
Confidence 56899999887665555433 344458888887754 445789999999999999988887776 3543 46899
Q ss_pred HHHHHHhcCcEEEEeccccc-------Ccc-ccc---cCcccccEEEecccc-ccCCCCceEEEEecCCCCccccccccC
Q psy8850 158 IGELCRSKGVIFHCDAAQAV-------GKI-DIN---IQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEAQIHGG 225 (397)
Q Consensus 158 i~~l~~~~gi~livD~a~~~-------~~~-~~~---~~~~~~d~~~~s~~K-~~g~~g~g~~~~~~~~~~~~~~~~~~~ 225 (397)
+++++|+||+++++|...+. |.. ..+ ....++|+++||+.| +.||. .|++++++++++.++..-.
T Consensus 162 l~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGGPQ-aGiI~Gkk~lI~~lk~~pl-- 238 (367)
T PF03841_consen 162 LAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGGPQ-AGIIVGKKELIEKLKKHPL-- 238 (367)
T ss_dssp HHHHHHHHT--EEEE-TTHHHHHHHTT----------CCCCT-SEEEEETTSSSSS-S--EEEEEEHHHHHHHHHHHH--
T ss_pred HHHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCCCCC-eEEEEeCHHHHHHHhhCCC--
Confidence 99999999999999988741 110 112 233489999999999 55554 7999999988887653211
Q ss_pred CccccccCCCCchhHHHHHHHHHHHHHH------H------HHHHHHHHHHHHHHHHHHHhh
Q psy8850 226 GHEYGLRSGTLATHQIVGMGEAFRLARI------E------MKEELKRILFLQKRLYNGLME 275 (397)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~l~~al~~~~~------~------~~~~~~~~~~~~~~l~~~l~~ 275 (397)
.+.-..+-..++++.++++.+.+ . +....+.+++++++|...|..
T Consensus 239 -----~RalrvdK~tla~L~atL~~Y~~~~~~~~~ip~l~ml~~~~~~L~~rA~~l~~~l~~ 295 (367)
T PF03841_consen 239 -----GRALRVDKLTLAALEATLRLYLDPDKAKEEIPTLRMLTQSLEELRARAERLAAQLKA 295 (367)
T ss_dssp -----TTT-B--HHHHHHHHHHHHH-------------------------------------
T ss_pred -----cceEeeCHHHHHHHHHHHHHHHHhhcccccccccccccccccccccccccccccccc
Confidence 11223445677888888876642 1 222345555556666666555
No 380
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.60 E-value=9e-14 Score=124.73 Aligned_cols=225 Identities=18% Similarity=0.211 Sum_probs=152.1
Q ss_pred CCCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhcc
Q psy8850 5 ATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKK 84 (397)
Q Consensus 5 ~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~ 84 (397)
+.+..++++++++.+.+..... -.. .-..+ ........+.+.++...++ +.+.++++.+.|+.+++.++. .
T Consensus 35 G~s~~~~e~iea~~~~~~~~v~-Le~-~l~~g-~~~~R~~~~~~~~~~~~~a--ea~~ivnnn~aAVll~~~al~----~ 105 (395)
T COG1921 35 GRSLYSPEAIEAMKEAMRAPVE-LET-DLKTG-KRGARLTELAELLCGLTGA--EAAAIVNNNAAAVLLTLNALA----E 105 (395)
T ss_pred CCccCCHHHHHHHHHHhcccce-eee-ecccc-hhhHHHHHHHHHHhcccch--hheeeECCcHHHHHHHHhhhc----c
Confidence 3456688999999888876332 111 11111 1112223344444444443 368899999999999999887 4
Q ss_pred CCCEEEEcC-----CCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCccccc--ccHHH
Q psy8850 85 RGKHIITVQ-----TEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVI--QPILE 157 (397)
Q Consensus 85 ~g~~vl~~~-----~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~--~~l~~ 157 (397)
+.+|+++. +.++.....+... |.+++.+... +.....+++.+|++++++++-.+.+|. |.. .+.++
T Consensus 106 -~~EvVis~g~lV~gg~~~v~d~~~~a---G~~l~EvG~t--n~t~~~d~~~AIne~ta~llkV~s~~~-~f~~~l~~~~ 178 (395)
T COG1921 106 -GKEVVVSRGELVEGGAFRVPDIIRLA---GAKLVEVGTT--NRTHLKDYELAINENTALLLKVHSSNY-GFTGMLSEEE 178 (395)
T ss_pred -CCeEEEEccccccCCCCChhHHHHHc---CCEEEEeccc--CcCCHHHHHHHhccCCeeEEEEeeccc-cccccccHHH
Confidence 45565543 4566666666665 8998887644 456899999999999999877777665 543 56788
Q ss_pred HHHHHHhcCcEEEEecccccCcc-ccc---cCcccccEEEecccc-ccCCCCceEEEEecCCCCccccccccCCcccccc
Q psy8850 158 IGELCRSKGVIFHCDAAQAVGKI-DIN---IQNYKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLR 232 (397)
Q Consensus 158 i~~l~~~~gi~livD~a~~~~~~-~~~---~~~~~~d~~~~s~~K-~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (397)
++++||++|+++++|.+.+.... ..+ .-..++|++++|+.| +.||. .|+++++++++++++....+ +.++
T Consensus 179 l~~ia~~~~lpvivD~aSg~~v~~e~~l~~~la~GaDLV~~SgdKllgGPq-aGii~GkKelI~~lq~~~l~----Ralr 253 (395)
T COG1921 179 LVEIAHEKGLPVIVDLASGALVDKEPDLREALALGADLVSFSGDKLLGGPQ-AGIIVGKKELIEKLQSHPLK----RALR 253 (395)
T ss_pred HHHHHHHcCCCEEEecCCccccccccchhHHHhcCCCEEEEecchhcCCCc-cceEechHHHHHHHHhhhhh----hhhh
Confidence 99999999999999999874311 112 234489999999999 55565 79999999988776544322 2233
Q ss_pred CCCCchhHHHHHHHHHHHHHH
Q psy8850 233 SGTLATHQIVGMGEAFRLARI 253 (397)
Q Consensus 233 ~~~~~~~~~~~l~~al~~~~~ 253 (397)
. ....++++.++++.+..
T Consensus 254 v---~K~tla~l~~aLe~y~~ 271 (395)
T COG1921 254 V---DKETLAALEAALELYLQ 271 (395)
T ss_pred c---CcHhHHHHHHHHHHHcC
Confidence 3 33567888888887753
No 381
>KOG0628|consensus
Probab=99.59 E-value=3.7e-12 Score=114.65 Aligned_cols=309 Identities=17% Similarity=0.154 Sum_probs=200.2
Q ss_pred HHHHHHHHHHHHHhCCCC---------CcEEEeCChhHHHHHHHHHhHhh----hc-----------cCCCEEEEcCCCC
Q psy8850 41 KAIEKARNEVAQLIYADP---------REIIWTSGATESNNLAIKGAAHF----YK-----------KRGKHIITVQTEH 96 (397)
Q Consensus 41 ~~~~~~~~~la~~~~~~~---------~~i~~~~g~t~a~~~~l~~l~~~----~~-----------~~g~~vl~~~~~~ 96 (397)
+..--.-++++++++.|. .-.++..+++++...++.+.... .. ..+-++..++.+|
T Consensus 113 ELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y~SDqah 192 (511)
T KOG0628|consen 113 ELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAYCSDQAH 192 (511)
T ss_pred HHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEEecCccc
Confidence 444445678888887642 23666677888877776654421 11 1134778899999
Q ss_pred hhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcCC------ceEEEEecccCcccccccHHHHHHHHHhcCcEEE
Q psy8850 97 KSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSD------TILVSVMLVNNEIGVIQPILEIGELCRSKGVIFH 170 (397)
Q Consensus 97 ~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~------~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~li 170 (397)
.+...+.... |.+++.++.+++..++.+.|+++|.++ |-+++.+-..+.+....++.+|..+|+++|+|++
T Consensus 193 ssveka~~i~---~VklR~l~td~n~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~ca~D~l~elg~Vc~~~glWLH 269 (511)
T KOG0628|consen 193 SSVEKACLIA---GVKLRALPTDENFGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSSCAFDELEELGPVCREEGLWLH 269 (511)
T ss_pred chHHHhHhhc---ceeEEEeecccCcCCCHHHHHHHHHHHHhCCCccEEEEEeecCccccccccHHHhcchhhhcCEEEE
Confidence 9998877666 899999999999899999999999763 4477777777777788889999999999999999
Q ss_pred EecccccCcc-ccccCcc-----cccEEEecccc-ccCCCCceEEEEecCCCCc----cccccccC---CccccccCCCC
Q psy8850 171 CDAAQAVGKI-DINIQNY-----KVDLMSFSAHK-IYGPKGIGALYIRRNPRTR----IEAQIHGG---GHEYGLRSGTL 236 (397)
Q Consensus 171 vD~a~~~~~~-~~~~~~~-----~~d~~~~s~~K-~~g~~g~g~~~~~~~~~~~----~~~~~~~~---~~~~~~~~~~~ 236 (397)
||++|+.... ...++.+ .+|.+.+..|| ++.--.+..+++++..... ..+..... .....++....
T Consensus 270 VDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lWvkd~~~~~~~~~vdp~yL~h~~~~~~~Dyrhwqi 349 (511)
T KOG0628|consen 270 VDAAYAGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLWVKDGTKLSRAFNVDPLYLKHAYQGSAPDYRHWQI 349 (511)
T ss_pred eehhhccccccCHHHHHHhhcchhhccccCChhheeEEeeeeecceeecCceeeeeeecChHhhcchhhccCCCcccccc
Confidence 9999984432 2222211 57999999999 4544457888887652110 11111000 00011111111
Q ss_pred ch-hHH--HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCC--hHHHHHHh
Q psy8850 237 AT-HQI--VGMGEAFRLA-RIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIE--GESLLMAI 310 (397)
Q Consensus 237 ~~-~~~--~~l~~al~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l 310 (397)
+. ..+ +.++..++.+ .+.++++.++..++++.+...+.+ -+.+++..+.- -+++.|+.++.+ .+.+..++
T Consensus 350 pl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~-d~~FE~~~~~~---lgLvcFRlk~~N~~ne~Ll~~i 425 (511)
T KOG0628|consen 350 PLGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRA-DPRFEIVNKRI---LGLVCFRLKGDNEINEALLNRL 425 (511)
T ss_pred ccccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhc-CCcceeecccc---cceeEEeecCCcHHHHHHHHHH
Confidence 11 111 2233344332 345777888888888888888877 67777776533 566677776432 34555555
Q ss_pred C---CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeC-CCCCHHHHHHHHHHHHHHHHHHHhc
Q psy8850 311 K---DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIG-RFTTEKEIDFTIKLLKMKVKKLREL 376 (397)
Q Consensus 311 ~---~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~-~~~~~~~i~~~~~~l~~~~~~~~~~ 376 (397)
. .+.+.+... .+.-.||+++. ..++.++|++.-+.|.+....+.+.
T Consensus 426 n~~g~i~l~~~~l--------------------~gk~vlRf~V~s~~t~~~di~~a~~~I~~~a~~l~~~ 475 (511)
T KOG0628|consen 426 NSSGRIHLVPASL--------------------HGKFVLRFAVCSPLTNESDIDEAWKIIFEAADELFEA 475 (511)
T ss_pred HhcCcEEEEEeee--------------------cceEEEEEEecCCCCcHHHHHHHHHHHHHHHHHHHhh
Confidence 4 354444321 11246999987 4478999999999999998886554
No 382
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=99.55 E-value=1.7e-13 Score=122.97 Aligned_cols=301 Identities=16% Similarity=0.122 Sum_probs=169.2
Q ss_pred HHHHHHHHHHHHhCCCC-CcEEEeCChh-HHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccC
Q psy8850 42 AIEKARNEVAQLIYADP-REIIWTSGAT-ESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPK 119 (397)
Q Consensus 42 ~~~~~~~~la~~~~~~~-~~i~~~~g~t-~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~ 119 (397)
....+-..+-+..|++. ...++++-+| ..+.+++.++. . ....+.|+++...|.+.+.++..+ |++++.||..
T Consensus 57 ltn~l~~d~~~~~G~~~~~~~~~vP~atgm~l~l~l~~l~-~-r~~a~~Viw~ridqkSc~kai~~A---Gl~~~vV~~~ 131 (389)
T PF05889_consen 57 LTNSLVLDALRLAGLRSVKSCFVVPMATGMSLTLCLLALR-M-RPKAKYVIWPRIDQKSCFKAIERA---GLEPVVVENV 131 (389)
T ss_dssp HHHHHHHHHHHHTTHTTHCEEEEESS-HHHHHHHHHHHHH-H-HCT--EEEEEEEETHHHHHHHHHT---T-EEEEE-EE
T ss_pred HHHHHHHHHHHHcCCccccceEEEecccccHHHHHHHHHh-c-ccCCceEEEeeccccchHHHHHhc---CCeEEEeecc
Confidence 33445555566678752 3467777776 35666677665 2 256799999999999999999988 9999999863
Q ss_pred ---CCCCCCHHHHHHHhcC---CceEEEEecccCccccccc-HHHHHHHHHhcCcEEEEecccccCcccc------ccCc
Q psy8850 120 ---NNGLITLSQLEEKICS---DTILVSVMLVNNEIGVIQP-ILEIGELCRSKGVIFHCDAAQAVGKIDI------NIQN 186 (397)
Q Consensus 120 ---~~~~~d~~~l~~~i~~---~~~~v~~~~~~~~tG~~~~-l~~i~~l~~~~gi~livD~a~~~~~~~~------~~~~ 186 (397)
+.-..|.+.+|+++++ +..+.++++.+...+...| +++|+++|++|||+.++.+||+..+... ....
T Consensus 132 ~~~d~l~td~~~ie~~i~~~G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~~~~~~i~~a~~~ 211 (389)
T PF05889_consen 132 LEGDELITDLEAIEAKIEELGADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQSSKCMHLIQQAWRV 211 (389)
T ss_dssp EETTEEEEHHHHHHHHHHHHCGGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-HHHHHHHHHHHHH
T ss_pred CCCCeeeccHHHHHHHHHHhCCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhHHHHHHHHHHHHhc
Confidence 2224578888888864 4567788888877888887 9999999999999999999999744211 0111
Q ss_pred ccccEEEecccc-ccCCCCceEEEEecC-CCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8850 187 YKVDLMSFSAHK-IYGPKGIGALYIRRN-PRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILF 264 (397)
Q Consensus 187 ~~~d~~~~s~~K-~~g~~g~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~ 264 (397)
-..|+++-|.-| +..|.|.+.+...+. .+..+...+.|. -+.+ +.+-.+...+.+...++........+
T Consensus 212 GRvda~vqS~dkNF~VPvGgai~As~~~~~i~~vs~~YpGR------as~s---p~ld~~itLl~LG~~g~~~ll~~r~~ 282 (389)
T PF05889_consen 212 GRVDAFVQSTDKNFMVPVGGAIMASFDPSGILAVSKEYPGR------ASAS---PSLDLFITLLSLGCTGYGALLKERKA 282 (389)
T ss_dssp STCSEEEEEHHHHHCEESSHEEEEESSHHHHHHHHHTSHSH------BTSH---HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcceeeeecCCCEEecCCCcEEEecCHHHHHHHHHHhhhh------hhcc---cchHHHHHHHHHhhhHHHHHHHHHHH
Confidence 146777888888 777777555554421 112222222221 0111 11222222233334455555555555
Q ss_pred HHHHHHHHHhhhc---CcEEEeCCCCCCCCceEEEEecCCC------hHHHHHHhC-----CcE-ecccCccCCCCCChh
Q psy8850 265 LQKRLYNGLMESI---EEIYINGDMNNRIPHNLNISFNFIE------GESLLMAIK-----DIA-VSSGSACTSASLEPS 329 (397)
Q Consensus 265 ~~~~l~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~-----~i~-~~~g~~~~~~~~~~~ 329 (397)
...++.++|++ + -+-.+..-+ ..+..+.+..+... ...+...|. |.. +.++.....
T Consensus 283 ~f~~l~erl~~-~aee~~e~ll~~p--~N~is~a~tl~~l~~~~~k~~~~lgs~Lf~R~VsG~RvV~~~~~~~t------ 353 (389)
T PF05889_consen 283 SFPYLKERLKK-WAEEVGERLLETP--RNHISMAFTLDTLYEISQKDGTFLGSMLFKRGVSGIRVVTPGGKKQT------ 353 (389)
T ss_dssp HHHHHHHHHHH-HHHHTTEEBSSST--T-SSEEEEE-TTCCTCCSSHHHHHHHHHHHTTEESSEEEETSSCEEE------
T ss_pred HHHHHHHHHHH-HHHHhhhhhcCCC--CCCeeEEEECccchhhccchhhhHHHHHHhCCcccceeeccCCCccc------
Confidence 55555555443 2 233333322 22455566665322 246666665 333 222111000
Q ss_pred hHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHH
Q psy8850 330 YVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVK 371 (397)
Q Consensus 330 ~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 371 (397)
... ..+...++-+.....++.+|||.++++|+++++
T Consensus 354 -----sh~-~~yp~~Ylt~AsaiG~~~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 354 -----SHS-SNYPCPYLTAASAIGMTREEVDYFVKRLDKIIK 389 (389)
T ss_dssp -----TTS-S--SSSEEEEEE-TT--HHHHHHHHHHHHHHHH
T ss_pred -----ccC-CCCchHHHHHHHHhCCCHHHHHHHHHHHHHHhC
Confidence 011 123348899988777999999999999999875
No 383
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.54 E-value=3.1e-12 Score=112.67 Aligned_cols=173 Identities=18% Similarity=0.178 Sum_probs=114.1
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEe--CChhHHHHHHHHHhHhhhccCCCEEEE-cCCCChhhHHHHHH-------HhhCC
Q psy8850 41 KAIEKARNEVAQLIYADPREIIWT--SGATESNNLAIKGAAHFYKKRGKHIIT-VQTEHKSVLDSIRK-------LENDG 110 (397)
Q Consensus 41 ~~~~~~~~~la~~~~~~~~~i~~~--~g~t~a~~~~l~~l~~~~~~~g~~vl~-~~~~~~s~~~~~~~-------~~~~g 110 (397)
...+.+++-.++.|+++.. ++=. -|||.|+.+++.+++ +|||+++. +-.-|.+....+-. +...|
T Consensus 54 ~GRd~le~iyA~vfgaE~A-LVRpq~vSGTHAi~~~Lfg~L----rpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~G 128 (403)
T PF06838_consen 54 IGRDKLERIYADVFGAEDA-LVRPQFVSGTHAIALALFGVL----RPGDELLSITGKPYDTLEEVIGIRGNGPGSLKEFG 128 (403)
T ss_dssp HHHHHHHHHHHHHCT-SEE-EEETTS-SHHHHHHHHHHHH------TT-EEEESSSS--CCHHHHHTSSSSSSSSTGGGT
T ss_pred ccHHHHHHHHHHHhCchhh-hhcccccchHHHHHHHHHhcC----CCCCeEEEcCCCchhhHHHHhCCCCCCCCChHHhC
Confidence 4677788889999998731 1111 289999999999999 79999985 44446666655532 22348
Q ss_pred cEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcc----cccccHHHHHHHHHhc--CcEEEEecccccCcccccc
Q psy8850 111 FRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEI----GVIQPILEIGELCRSK--GVIFHCDAAQAVGKIDINI 184 (397)
Q Consensus 111 ~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~t----G~~~~l~~i~~l~~~~--gi~livD~a~~~~~~~~~~ 184 (397)
++...+++.++|.+|.+.+++++++++++|++.---... =.+..++++++++|+. ++.++||++|+-.......
T Consensus 129 i~Y~~v~L~~dg~~D~~~i~~~~~~~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~~EP 208 (403)
T PF06838_consen 129 IKYREVPLTEDGTIDWEAIKKALKPNTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVETQEP 208 (403)
T ss_dssp -EEEE--B-TTSSB-HHHHHHHHHTTEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSSS-G
T ss_pred ceeEEEeecCCCCcCHHHHHHhhccCceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceeccccCc
Confidence 899999999999999999999999999999887442111 1222355566666654 8999999999966555555
Q ss_pred CcccccEEEecccc-ccC---CCCceEEEEecCCCCccc
Q psy8850 185 QNYKVDLMSFSAHK-IYG---PKGIGALYIRRNPRTRIE 219 (397)
Q Consensus 185 ~~~~~d~~~~s~~K-~~g---~~g~g~~~~~~~~~~~~~ 219 (397)
...++|++.+|+=| .+| |. .|++..++++.+...
T Consensus 209 ~~vGADl~aGSLIKNpGGgiApt-GGYIaGr~~lVe~~a 246 (403)
T PF06838_consen 209 TEVGADLMAGSLIKNPGGGIAPT-GGYIAGRKDLVERAA 246 (403)
T ss_dssp GGGT-SEEEEETTSGGGTTT-SS--EEEEESHHHHHHHH
T ss_pred cccchhheeccceeCCCCCccCc-CCEEechHHHHHHHH
Confidence 56699999999999 544 44 499999988776653
No 384
>KOG2790|consensus
Probab=99.53 E-value=4.7e-12 Score=106.87 Aligned_cols=334 Identities=16% Similarity=0.120 Sum_probs=218.7
Q ss_pred CCCCCCCHHHHHHHHHHHhhccCCCCC--CCcchhhhHHHHHHHHHHHHHHHhCCCCCc--EEEeCChhHHHHHHHHHhH
Q psy8850 4 SATTPIDPRVVDKMIPYLRVQFGNPAS--RNHIYGWTAEKAIEKARNEVAQLIYADPRE--IIWTSGATESNNLAIKGAA 79 (397)
Q Consensus 4 ~~~~~~~~~v~~a~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~la~~~~~~~~~--i~~~~g~t~a~~~~l~~l~ 79 (397)
+++..+|++|...+++-+..+.+-..+ .....+-.+..++.+.+..+++++++|... +++..|||.-..++...+.
T Consensus 13 aGPAklp~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f~kii~~tes~lreLlniPdn~~vlf~QGGGt~qFaAv~lNL~ 92 (370)
T KOG2790|consen 13 AGPAKLPESVLLEAQKDLLNFNGSGISVMEMSHRSKDFAKIINDTESLLRELLNIPDNYKVLFLQGGGTGQFAAVPLNLI 92 (370)
T ss_pred CCcccCCHHHHHHHHHHhhccCCCcceEEEecccchhHHHHHHHHHHHHHHHHcCCCceeEEEEeCCCcccccccchhhh
Confidence 445567888888888777664332211 012223455678999999999999998653 5556677776666666555
Q ss_pred h-hhccCCCEEEEcCCCChhhHHHHHHHhhCCcE-EEEeccCC-C-C-CCCHHHHHHHhcCCceEEEEecccCccccccc
Q psy8850 80 H-FYKKRGKHIITVQTEHKSVLDSIRKLENDGFR-VTYLKPKN-N-G-LITLSQLEEKICSDTILVSVMLVNNEIGVIQP 154 (397)
Q Consensus 80 ~-~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~-v~~v~~~~-~-~-~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~ 154 (397)
. ...+.-|-|++..++-. +++.+++.|.. .+..+..+ + | -+|.+.++ .+++.+.++++...+.-|+-.+
T Consensus 93 glK~g~~AdYiVTGsWS~K----A~~EAkk~~~~~~V~~~~k~y~ygkvPd~~~w~--~~~da~yvyyCaNETVHGVEf~ 166 (370)
T KOG2790|consen 93 GLKHGRCADYVVTGSWSAK----AAEEAKKYGTPNIVIPKLKSYTYGKVPDPSTWE--LNPDASYVYYCANETVHGVEFD 166 (370)
T ss_pred ccccCCccceEEeccccHH----HHHHHHhhCCceEEeccccccccCcCCChhhcc--cCCCccEEEEecCceeeceecC
Confidence 3 11123467787776433 33444444543 33333322 2 2 23444443 3455678888888777787655
Q ss_pred HHHHHHHHHhcCcEEEEecccccCccccccCcccccEEEeccccccCCCCceEEEEecCCCCccc---cccccCCc--cc
Q psy8850 155 ILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIE---AQIHGGGH--EY 229 (397)
Q Consensus 155 l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~~---~~~~~~~~--~~ 229 (397)
.-. +-.-+|..++.|-.+-+-+.++|+. ..++++...+|..|+.|.-+++++++++.... |...+... ..
T Consensus 167 ~~P---~~~~~~~vlVaDmSSnflSrpvDvs--k~gvi~aGAQKN~G~aG~Tvvivr~dllg~~~~~tP~v~dyk~~~~N 241 (370)
T KOG2790|consen 167 FIP---VNDPKGAVLVADMSSNFLSRPVDVS--KFGVIFAGAQKNVGPAGVTVVIVRKDLLGNALDITPSVLDYKIMDKN 241 (370)
T ss_pred CCC---CCCCCCceEEEecccchhcCCccch--hcceEEeccccccCccccEEEEEehhhhcccccCCccccceeeeccc
Confidence 322 2234689999999988888899988 56789999999999999999999998776643 33333211 12
Q ss_pred cccCCCCchhHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhhhcCcEEEeC-CCCCCCCceEEEEecCCC---h
Q psy8850 230 GLRSGTLATHQIVGMGEAFRLARI--EMKEELKRILFLQKRLYNGLMESIEEIYING-DMNNRIPHNLNISFNFIE---G 303 (397)
Q Consensus 230 ~~~~~~~~~~~~~~l~~al~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~ 303 (397)
....+|++..++..+.-.++++.+ |+..+.+...+..+.+++.|.+ ..++..-. ++..+ ..+++.|+-.+ .
T Consensus 242 nSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~iD~-s~gfy~cpVe~~~R--S~MNV~Fri~~d~Le 318 (370)
T KOG2790|consen 242 NSLYNTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDAIDN-SNGFYRCPVEPSVR--SRMNVPFRIEKDELE 318 (370)
T ss_pred cccccCCCeeeeeehhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHh-cCCeEEcccchhhh--hhcccceeecchHHH
Confidence 334678899999999999999876 5888889999999999999999 66765443 32222 34455554211 1
Q ss_pred HHHHHH-hC-CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHH
Q psy8850 304 ESLLMA-IK-DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKK 372 (397)
Q Consensus 304 ~~~~~~-l~-~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 372 (397)
.++... .+ +. .++.+..+-+.||-|+...++.+++.++++.|+++.+.
T Consensus 319 ~eFLkeA~~~~m---------------------v~LKGhRSVGGiRASlYNAisv~~~q~L~~~m~~F~k~ 368 (370)
T KOG2790|consen 319 AEFLKEAAKEHM---------------------VQLKGHRSVGGIRASLYNAISVEEVQKLAAFMKEFQKK 368 (370)
T ss_pred HHHHHHHHHhhh---------------------hccccccccccchhhhhccccHHHHHHHHHHHHHHHHh
Confidence 222222 21 22 22233344488999999999999999999999988764
No 385
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.52 E-value=1.5e-11 Score=122.78 Aligned_cols=285 Identities=12% Similarity=0.109 Sum_probs=194.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHHhhC-CcEEEEec
Q psy8850 39 AEKAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLEND-GFRVTYLK 117 (397)
Q Consensus 39 ~~~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~-g~~v~~v~ 117 (397)
.-+.+.+++..++++.|.+..+--+-.++|.+-+.++++... ..+++.+|++++..||.+...++..... |++++.
T Consensus 122 ~Lqal~e~Qtmi~~LtGm~vaNASl~D~atA~aEA~~ma~~~-~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~-- 198 (954)
T PRK12566 122 RLEALLNFQQMTIDLTGLDLANASLLDEATAAAEAMALAKRV-AKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV-- 198 (954)
T ss_pred HHHHHHHHHHHHHHHhCchhhhhhhccchhHHHHHHHHHHHH-hhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE--
Confidence 346778899999999999977777888988877766665432 1123578999999999999888876554 888774
Q ss_pred cCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccc--cCccccccCcccccEEEec
Q psy8850 118 PKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQA--VGKIDINIQNYKVDLMSFS 195 (397)
Q Consensus 118 ~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~--~~~~~~~~~~~~~d~~~~s 195 (397)
+++++++.+++..|++.+|+ -.|.+.++++|.+++|++|++++ +.+.- .+.+ -...++++|+++++
T Consensus 199 ---------~~~~~~~~~~~~~v~vq~P~-~~G~i~d~~~i~~~~h~~gal~~-~~~d~laL~ll-~~Pge~GADI~vG~ 266 (954)
T PRK12566 199 ---------DAVDNLAAHAVFGALLQYPD-THGEIRDLRPLIDQLHGQQALAC-VAADLLSLLVL-TPPGELGADVVLGS 266 (954)
T ss_pred ---------cchhhcCCCCEEEEEEECCC-CceEEccHHHHHHHHHHcCCEEE-EEeCHHHHhCC-CChhhcCCcEEeeC
Confidence 33455566678888898885 45888999999999999999866 43332 2222 23456699999998
Q ss_pred cccc-----cCCCCceEEEEecCCCCcccccccc------CC-----------ccccccCCCCchh---HHHHHHHHHHH
Q psy8850 196 AHKI-----YGPKGIGALYIRRNPRTRIEAQIHG------GG-----------HEYGLRSGTLATH---QIVGMGEAFRL 250 (397)
Q Consensus 196 ~~K~-----~g~~g~g~~~~~~~~~~~~~~~~~~------~~-----------~~~~~~~~~~~~~---~~~~l~~al~~ 250 (397)
.+-+ +|++..|++.++++....+.-.+.| |. +..+.+-.|.|.. .++++.+++-.
T Consensus 267 ~Q~fGvp~~~GGP~ag~~a~~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~A~~a~~Y~ 346 (954)
T PRK12566 267 TQRFGVPMGYGGPHAAYFACRDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLLANIAGFYA 346 (954)
T ss_pred CCcCCCCCCCCCCCeeeeeehHHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhhHHHHHHHHHHHHHH
Confidence 8764 4444589999987655554433332 11 1123345566654 34444444443
Q ss_pred H---HHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCChHHHHHHhC--CcEecccCccCCCC
Q psy8850 251 A---RIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAIK--DIAVSSGSACTSAS 325 (397)
Q Consensus 251 ~---~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~i~~~~g~~~~~~~ 325 (397)
. .+|++++.+++..++.+|.+.|.+ .|+.+... .+..-+.+.+. ....++..... ++.++.-
T Consensus 347 ~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~--~g~~~~~~---~fF~~~~v~~~-~~~~~~~~~a~~~~~n~r~~------- 413 (954)
T PRK12566 347 VYHGPEGLKRIAQRVHRLTAILAAGLEA--KGIKRLNR---HFFDTLTLEVG-GAQAAIIESAEAARINLRIL------- 413 (954)
T ss_pred HHhChHHHHHHHHHHHHHHHHHHHHHHh--cCCccccC---CccceEEEEcc-CCHHHHHHHHHHCCCeeEEe-------
Confidence 2 457999999999999999999998 78776644 12233444542 13444443332 5555421
Q ss_pred CChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHH
Q psy8850 326 LEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLK 367 (397)
Q Consensus 326 ~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~ 367 (397)
..+.+.||+...++.+|++.+++++.
T Consensus 414 ----------------~~~~~~~s~de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 414 ----------------GRGRLGVSLDETCDEATVARLFDIFL 439 (954)
T ss_pred ----------------CCCeEEEEeCCCCCHHHHHHHHHHhc
Confidence 12678999999999999999999984
No 386
>KOG1403|consensus
Probab=99.42 E-value=4.1e-11 Score=102.12 Aligned_cols=329 Identities=16% Similarity=0.160 Sum_probs=194.2
Q ss_pred CCCCCCHHHHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHH-HHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhc
Q psy8850 5 ATTPIDPRVVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKA-RNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYK 83 (397)
Q Consensus 5 ~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~ 83 (397)
-.+..+|+|+++....+.....| .+-....+.++ +...+.+-+.+ .++|++||++|++++++ +.+.++
T Consensus 58 Hvghchp~VV~A~~kQmat~~tN--------~RFlhd~lv~cA~~l~stlPeLs--vc~F~NSGSEANDLALR-LAR~ft 126 (452)
T KOG1403|consen 58 HVGHCHPEVVRAGAKQMATISTN--------NRFLHDELVQCARTLTSTLPELS--VCFFVNSGSEANDLALR-LARNFT 126 (452)
T ss_pred hcccCCHHHHHHHHHHHhHhccc--------chhhHHHHHHHHHHHhhcCCCce--EEEEecCCchhhHHHHH-HHHhhc
Confidence 34567899999998888763322 11222333443 33333333333 69999999999999999 455666
Q ss_pred cCCCEEEEcCCCChhhHHHHHHHhhC----C---cE---EEEeccCCC--C-------------CCCHHHHHHHhc----
Q psy8850 84 KRGKHIITVQTEHKSVLDSIRKLEND----G---FR---VTYLKPKNN--G-------------LITLSQLEEKIC---- 134 (397)
Q Consensus 84 ~~g~~vl~~~~~~~s~~~~~~~~~~~----g---~~---v~~v~~~~~--~-------------~~d~~~l~~~i~---- 134 (397)
+..|.|.+ +..|+++......+..+ | .+ ++.-|+.+. | ..=.+.+++.+.
T Consensus 127 khqDvItl-dHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~ 205 (452)
T KOG1403|consen 127 KHQDVITL-DHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYADPVKEICQDQLA 205 (452)
T ss_pred ccCceEEE-echhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccccCCcccchhhhhhHHHHHHHHHHh
Confidence 77666655 45555555443332221 1 11 222344321 1 111233444443
Q ss_pred --CCceEEEEecccCccccccc----HHHHHHHHHhcCcEEEEecccc-cCcc-----ccccCcccccEEEecccc-ccC
Q psy8850 135 --SDTILVSVMLVNNEIGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKI-----DINIQNYKVDLMSFSAHK-IYG 201 (397)
Q Consensus 135 --~~~~~v~~~~~~~~tG~~~~----l~~i~~l~~~~gi~livD~a~~-~~~~-----~~~~~~~~~d~~~~s~~K-~~g 201 (397)
....+++.++-++=.|.+.| .+++++..|.+|...|.|+.+- +|.+ .+....+-+|+++.. | ++.
T Consensus 206 ~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~hyWafq~y~fiPDIVtmg--KpmGN 283 (452)
T KOG1403|consen 206 KGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGSHYWAFQTYNFIPDIVTMG--KPMGN 283 (452)
T ss_pred cCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccchhhhhhhhhccccchheec--ccCCC
Confidence 13456777777777888888 5789999999999999999985 3322 222333357888776 9 665
Q ss_pred CCCceEEEEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEE
Q psy8850 202 PKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIY 281 (397)
Q Consensus 202 ~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 281 (397)
+...+.+...++..+ .+.+.+..+..+.|..+..-..++ +.++..++ +++.++..+..++|...|++.-....
T Consensus 284 GhPVa~VattkeIA~----Af~atgv~YFNTyGGnPVsCAv~l-aVm~v~e~--E~Lq~ha~~vG~~L~~lL~~~k~kh~ 356 (452)
T KOG1403|consen 284 GHPVAAVATTKEIAQ----AFHATGVEYFNTYGGNPVSCAVGL-AVMRVCED--ENLQEHAQQVGEKLEVLLRRLKQKHE 356 (452)
T ss_pred CCeeeEEeccHHHHH----HhccccceehhccCCCchhHHHHH-HHHHHHhh--hhHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 666788887754433 333333444455666665555555 66776655 56677777788888777766212334
Q ss_pred EeCCCCCCCCceEEEEec-C----C----ChHHHHHHhC---CcEecccCccCCCCCChhhHHHhhCCCccccCceEEEe
Q psy8850 282 INGDMNNRIPHNLNISFN-F----I----EGESLLMAIK---DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRFT 349 (397)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~-~----~----~~~~~~~~l~---~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~ 349 (397)
++++-- ..+.++-+.+- + . .+..+..+|+ ++.+..-. . ..+.+.|-
T Consensus 357 ~IGDvR-GvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsaDG-----------------P----h~NilKiK 414 (452)
T KOG1403|consen 357 CIGDVR-GVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSADG-----------------P----HRNILKIK 414 (452)
T ss_pred ceeccc-cceEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhEEEecCC-----------------C----CCceeecC
Confidence 444321 11222222221 1 1 1233444454 45554321 1 13789998
Q ss_pred eCCCCCHHHHHHHHHHHHHHHHHHHhc
Q psy8850 350 IGRFTTEKEIDFTIKLLKMKVKKLREL 376 (397)
Q Consensus 350 ~~~~~~~~~i~~~~~~l~~~~~~~~~~ 376 (397)
++.+.++++.++++..|.+++..+.++
T Consensus 415 PPmCFneena~e~v~~ld~iLT~mee~ 441 (452)
T KOG1403|consen 415 PPMCFNEENADEFVLGLDEILTVMEER 441 (452)
T ss_pred CCcccChhhHHHHHHHHHHHHHHHHHH
Confidence 888889999999999999998776654
No 387
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=99.36 E-value=6.5e-10 Score=97.27 Aligned_cols=304 Identities=17% Similarity=0.174 Sum_probs=182.5
Q ss_pred HHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHh-hhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCC
Q psy8850 42 AIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAH-FYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN 120 (397)
Q Consensus 42 ~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~-~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~ 120 (397)
....+++...+.+|.. .++.|.-|-.|-+.+...+.. .-..+|.+.++.++.|..+..+-... -|..++-++.++
T Consensus 80 s~~~L~~avkdifGfq--~~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h~~~--ng~~~~n~~~~e 155 (471)
T COG3033 80 SYYALADAVKDIFGFQ--YTIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGHIQI--NGATPRNVYVDE 155 (471)
T ss_pred cHHHHHHHHHHhcCce--eeeeccCCccHHHHHHHHHhhhccccCCccccccccceecchhHHHHh--cCCccccccccc
Confidence 4567888889999975 677788777776666555543 12245666666666666665544332 266666665542
Q ss_pred ----------CCCCCHHHHHHHhcC----CceEEEEecccCc-cccccc---HHHHHHHHHhcCcEEEEeccccc-----
Q psy8850 121 ----------NGLITLSQLEEKICS----DTILVSVMLVNNE-IGVIQP---ILEIGELCRSKGVIFHCDAAQAV----- 177 (397)
Q Consensus 121 ----------~~~~d~~~l~~~i~~----~~~~v~~~~~~~~-tG~~~~---l~~i~~l~~~~gi~livD~a~~~----- 177 (397)
.|.+|++.|+++|.+ +..+|+.+-.+|. .|...+ ++++.++|++|+|+++.|++-..
T Consensus 156 a~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENaYF 235 (471)
T COG3033 156 AFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENAYF 235 (471)
T ss_pred cccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhhhh
Confidence 367899999999975 5667766544444 555555 67899999999999999987431
Q ss_pred -CccccccCcc-----------cccEEEecccc-ccCCCCceEEEEecCCC----Ccccc--ccccCCccccccCCCCch
Q psy8850 178 -GKIDINIQNY-----------KVDLMSFSAHK-IYGPKGIGALYIRRNPR----TRIEA--QIHGGGHEYGLRSGTLAT 238 (397)
Q Consensus 178 -~~~~~~~~~~-----------~~d~~~~s~~K-~~g~~g~g~~~~~~~~~----~~~~~--~~~~~~~~~~~~~~~~~~ 238 (397)
-.......++ .+|-.+.|.-| .+...| |++..+++-. ..++. ....|. -..|+..-
T Consensus 236 Ik~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~lvnmG-Gfl~~~D~~~fDvy~~~~~~~V~~eG~----~tYGgl~G 310 (471)
T COG3033 236 IKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDGLVNMG-GFLCFKDDSFFDVYEECRTLVVVQEGF----PTYGGLAG 310 (471)
T ss_pred hhhcCcccccccHHHHHHHHHhhhhhheeeccccceeccc-cEEEecCccHHHHHHHHHhheEeeccc----cccCcccc
Confidence 1111222221 58999999999 888886 9999988732 22221 111111 12344444
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEE----ecCCC-----hHHHHHH
Q psy8850 239 HQIVGMGEAFRLARIEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNIS----FNFIE-----GESLLMA 309 (397)
Q Consensus 239 ~~~~~l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-----~~~~~~~ 309 (397)
..+.++...|....+ ..+.++.-+..++|.+.|++ .|+.+..+.+ ++.+.+. ++.++ +..+.-.
T Consensus 311 rdmealAvGL~e~~~--~~yl~~Rv~Qv~YL~~~l~~--~GVpi~~paG---GHavfvda~~~lphip~eqFpaqala~e 383 (471)
T COG3033 311 RDMEALAVGLREGVN--FDYLAHRVAQVQYLADGLEE--AGVPIVQPAG---GHAVFVDAGKFLPHIPAEQFPAQALACE 383 (471)
T ss_pred hhHHHHHHHHHHhcC--cHHHHHHHHHHHHHHHHHHh--cCCeeEecCC---CceEEeehhhhcCCCChhhCcHHHHHHH
Confidence 556666555554332 22334444456788888888 6887776655 3333333 23333 3344444
Q ss_pred hC---CcEecccCccCCCCCChhhHHHhhCCCccc------cCceEEEeeC-CCCCHHHHHHHHHHHHHHHHHH
Q psy8850 310 IK---DIAVSSGSACTSASLEPSYVLRALGCNDEL------AHSSIRFTIG-RFTTEKEIDFTIKLLKMKVKKL 373 (397)
Q Consensus 310 l~---~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~------~~~~iRi~~~-~~~~~~~i~~~~~~l~~~~~~~ 373 (397)
|- ||....-..++. |.+... .-..+|+.++ ..-|.+.+|..++.++++.+.-
T Consensus 384 ly~e~GiRavElG~~~~------------~rd~ktg~q~~~~~elvRltipRrtYt~~HmD~V~~a~~~l~e~~ 445 (471)
T COG3033 384 LYKEAGIRAVELGSFSL------------GRDPKTGKQHPPPAELVRLTIPRRTYTQTHMDFVIEAFKALKENA 445 (471)
T ss_pred HHHHhCeeeeeeeceec------------ccCCCccccCCCchheeeEeccccccchhHHHHHHHHHHHHHhcc
Confidence 42 543332211211 111100 1157999987 3357899999999999887654
No 388
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=99.34 E-value=4.1e-11 Score=104.96 Aligned_cols=285 Identities=12% Similarity=0.099 Sum_probs=155.0
Q ss_pred HHHHHHHHHHHHhC---C---CCCcEEEeCChhHHHHHHHHHhHhh--hccCCCEEEEcCCCChhhHHHHHHHhhCCcEE
Q psy8850 42 AIEKARNEVAQLIY---A---DPREIIWTSGATESNNLAIKGAAHF--YKKRGKHIITVQTEHKSVLDSIRKLENDGFRV 113 (397)
Q Consensus 42 ~~~~~~~~la~~~~---~---~~~~i~~~~g~t~a~~~~l~~l~~~--~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v 113 (397)
+..++++.|+++.. . +.-.|++.+|+|+.+++++.+|... ...+.-.|+...|.|+++......+.....+-
T Consensus 44 ~s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~y~w 123 (363)
T PF04864_consen 44 ISPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRLYKW 123 (363)
T ss_dssp S-HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTTEEE
T ss_pred ccHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccCccc
Confidence 44556666666654 2 2224999999999999999998754 33445789999999999987766553322222
Q ss_pred EEeccCCCCCCCHHHHHHHhcCCceEE-EEecccCcccccccHHHHHHHHHhcCcEEEEecccccCccccccCcccccEE
Q psy8850 114 TYLKPKNNGLITLSQLEEKICSDTILV-SVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLM 192 (397)
Q Consensus 114 ~~v~~~~~~~~d~~~l~~~i~~~~~~v-~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~~ 192 (397)
..- ... ..+. +.....| ++++|+||.|.+-- .+++.-+..+|.|-+|.++....-....+-|+.
T Consensus 124 ~Gd--a~~-------~~~~-~~~~~~IElVTSPNNPDG~lr~-----~V~~g~~~k~I~D~AYYWPhyTpI~~~aD~DiM 188 (363)
T PF04864_consen 124 AGD--ASN-------FKNS-DNPSPYIELVTSPNNPDGQLRE-----AVLNGSSGKVIHDLAYYWPHYTPITAPADHDIM 188 (363)
T ss_dssp EEE--CCC-------GTT--S-CCGEEEEEESS-TTT-----------SSTTTEEEEEEE-TT-STTTS---S-B--SEE
T ss_pred ccc--HHh-------hccC-CCCCCeEEEEeCCCCCcccccc-----hhcCCCCcceeeeeeeecccccccCCCCCCceE
Confidence 211 111 1110 0123444 89999999997521 134566778899999999886433333478999
Q ss_pred EeccccccCCC--CceEEEEecCCCC-ccccccccCCccccccCCCCchhHHHHHHHHHHHHHHH----------HHHHH
Q psy8850 193 SFSAHKIYGPK--GIGALYIRRNPRT-RIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIE----------MKEEL 259 (397)
Q Consensus 193 ~~s~~K~~g~~--g~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~----------~~~~~ 259 (397)
.|+++|+.|=. .+|+.+++++... ++..++.- ...|..-=.++.++ ..|+.+.++ ..--.
T Consensus 189 LFT~SK~TGHAGSR~GWAlVKD~~Va~kM~~y~~l------nTiGvS~dsQLRa~-kiLk~v~~~~~~~~~~~~~F~f~~ 261 (363)
T PF04864_consen 189 LFTLSKLTGHAGSRFGWALVKDEEVAKKMTKYMEL------NTIGVSRDSQLRAL-KILKVVLDGYGTEKGTEDIFHFGY 261 (363)
T ss_dssp EEEHHHHCS-GGG-EEEEEES-HHHHHHHHHHHHH------HCSS--HHHHHHHH-HHHHHHHHHCCHHTTTTSHHHHHH
T ss_pred EEEEecccCccccccceeeecCHHHHHHHHHHHHH------hcccCcHHHHHHHH-HHHHHHHhcccCCCCccchHHHHH
Confidence 99999977633 4899999876332 23222211 12222222333333 444444332 12234
Q ss_pred HHHHHHHHHHHHHHhhhcCcEEEeCCCC----------CCCCceEEEEecCCChHHHHHHhC--CcEecccCccCCCCCC
Q psy8850 260 KRILFLQKRLYNGLMESIEEIYINGDMN----------NRIPHNLNISFNFIEGESLLMAIK--DIAVSSGSACTSASLE 327 (397)
Q Consensus 260 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~l~--~i~~~~g~~~~~~~~~ 327 (397)
+.++++-++|++.+.+ ...+.+...+. ...+.+.++.....+..+-...|+ +|.-+.|..|..
T Consensus 262 ~~M~~RW~~L~~~~~~-S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~eed~DC~~~l~~~~I~tr~G~~fga---- 336 (363)
T PF04864_consen 262 STMRERWEKLRAAVSA-SKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCEREEDEDCYAVLREAKIITRSGVLFGA---- 336 (363)
T ss_dssp HHHHHHHHHHHHHHCC-SSSEEE---SCEEETTTTCEEE---SEEEEEESSCGGSSHHHHHHCTTEEEEEGGGGTS----
T ss_pred HHHHHHHHHHHHHHHh-cCceecCcCCchhccccccccCCCCCeEEEecCCcccccHHHHHHhCCcccCCCCccCC----
Confidence 5666667778888776 44444332211 012455666655322233333343 898888876654
Q ss_pred hhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHH
Q psy8850 328 PSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMK 369 (397)
Q Consensus 328 ~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 369 (397)
+ ..++|||+-- ++++.|.++++|..+
T Consensus 337 ----------~----~ryVRlSml~--~~d~Fd~l~~rL~~l 362 (363)
T PF04864_consen 337 ----------D----SRYVRLSMLK--RDDDFDQLLERLSKL 362 (363)
T ss_dssp ---------------TTEEEEESSS---HHHHHHHHHHHHCC
T ss_pred ----------C----CCeEEEeccC--CHHHHHHHHHHHHhh
Confidence 1 3899999974 899999999999754
No 389
>KOG1412|consensus
Probab=99.30 E-value=5.7e-10 Score=95.71 Aligned_cols=292 Identities=15% Similarity=0.135 Sum_probs=177.0
Q ss_pred HHHHHHHHHHHH-hCCC-----CCc--EEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHHhhCC-cE
Q psy8850 42 AIEKARNEVAQL-IYAD-----PRE--IIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDG-FR 112 (397)
Q Consensus 42 ~~~~~~~~la~~-~~~~-----~~~--i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g-~~ 112 (397)
.++.+++..+++ +|.+ .+. -+-+-|||.|+......+..++. ...|.+++|.+..+...++.+ | .+
T Consensus 75 Gl~~F~~~A~el~lg~~s~a~kE~Rv~~vQslsGTGAl~~~A~Fl~~~~~--~~~VY~SnPTW~nH~~if~~a---Gf~t 149 (410)
T KOG1412|consen 75 GLPTFTKAATELLLGADSPAIKEDRVFGVQSLSGTGALRIAADFLATFYN--KNTVYVSNPTWENHHAIFEKA---GFTT 149 (410)
T ss_pred CchhhhhhhHHHhcCCCchhhhhccccceeeccccchhhhhHHHHHHhcc--cceeEecCCchhHHHHHHHHc---CCce
Confidence 445555555554 3432 122 44456899999999887666553 467999999999999888877 7 45
Q ss_pred EEEeccC--CCCCCCHHHHHHHhcCCc--eEE-EEecccCccccccc---HHHHHHHHHhcCcEEEEecccc-cCccccc
Q psy8850 113 VTYLKPK--NNGLITLSQLEEKICSDT--ILV-SVMLVNNEIGVIQP---ILEIGELCRSKGVIFHCDAAQA-VGKIDIN 183 (397)
Q Consensus 113 v~~v~~~--~~~~~d~~~l~~~i~~~~--~~v-~~~~~~~~tG~~~~---l~~i~~l~~~~gi~livD~a~~-~~~~~~~ 183 (397)
+..+++= ++-.+|++.+-+.++..| .++ +-...+||||.-.. +..|+++.++++...+.|.+|- +.+-.++
T Consensus 150 v~~Y~yWd~~~k~~d~e~~Lsdl~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~ 229 (410)
T KOG1412|consen 150 VATYPYWDAENKCVDLEGFLSDLESAPEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLD 229 (410)
T ss_pred eeeeeeecCCCceecHHHHHHHHhhCCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCcc
Confidence 5566663 345789888888876543 233 33345899998544 5678888899999999998864 4444444
Q ss_pred cCcc--------cc-cEEEeccccccCCCC--ceEEEE--e-cCCCCccccccccCCccccccCCCCchhHHHHH-----
Q psy8850 184 IQNY--------KV-DLMSFSAHKIYGPKG--IGALYI--R-RNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGM----- 244 (397)
Q Consensus 184 ~~~~--------~~-d~~~~s~~K~~g~~g--~g~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----- 244 (397)
-+.+ +. -+++.||.|.+|..+ .|-+.+ + +.....+...+. ...+...+.|+..+..-.
T Consensus 230 ~DawAiR~fV~~g~e~fv~QSFaKNfGlYneRvGnltvv~~n~a~i~~v~SQl~---lviR~~~SNPPAyGArIV~kvL~ 306 (410)
T KOG1412|consen 230 ADAWAIRYFVEQGFELFVCQSFAKNFGLYNERVGNLTVVVNNPAVIAGVKSQLT---LVIRSNWSNPPAYGARIVHKVLS 306 (410)
T ss_pred ccHHHHHHHHhcCCeEEEEhhhhhhcccccccccceEEEecChhHHHHHHHHHH---HHHhhccCCCcchhhHHHHHHhc
Confidence 3333 22 478899999555332 444433 2 111111111110 001112222332222212
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc--CcEEEeCCCCCCCCceEEEEecCCChHHHHHHhC--CcEecccC
Q psy8850 245 -GEAFRLARIEMKEELKRILFLQKRLYNGLMESI--EEIYINGDMNNRIPHNLNISFNFIEGESLLMAIK--DIAVSSGS 319 (397)
Q Consensus 245 -~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~i~~~~g~ 319 (397)
.+..+.+...+..+..++++++..|++.|.. + ||.- +.-....+ +|++-+.++.++..-.. .|.+.+.
T Consensus 307 tP~lre~W~~sik~MssRI~~MR~aLrd~L~a-L~TPGtW---DHI~~QiG--MFSyTGLtp~qV~~li~~h~vyLl~~- 379 (410)
T KOG1412|consen 307 TPELREQWIQSIKTMSSRIKKMRTALRDHLVA-LKTPGTW---DHITQQIG--MFSYTGLTPAQVDHLIENHKVYLLSD- 379 (410)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCCcH---HHHHhhcc--ceeecCCCHHHHHHHHHhceEEEecC-
Confidence 2233344456888889999999999999987 4 2210 00001123 46667788776654444 4544432
Q ss_pred ccCCCCCChhhHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHHHh
Q psy8850 320 ACTSASLEPSYVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKLRE 375 (397)
Q Consensus 320 ~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 375 (397)
=||++.. .+...+|+...+|.+.++.+..
T Consensus 380 --------------------------GRInisG-LN~~NveyVAkAIde~Vr~~~~ 408 (410)
T KOG1412|consen 380 --------------------------GRINISG-LNMKNVEYVAKAIDETVRAIKS 408 (410)
T ss_pred --------------------------CcEeeec-cccccHHHHHHHHHHHHHhhcc
Confidence 1888876 4678999999999999887653
No 390
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.98 E-value=1e-08 Score=87.78 Aligned_cols=171 Identities=16% Similarity=0.112 Sum_probs=121.8
Q ss_pred HHHHHHHHHHHHhCCCCCc--EEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCC-ChhhHHHHH-------HHhhCCc
Q psy8850 42 AIEKARNEVAQLIYADPRE--IIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTE-HKSVLDSIR-------KLENDGF 111 (397)
Q Consensus 42 ~~~~~~~~la~~~~~~~~~--i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~-~~s~~~~~~-------~~~~~g~ 111 (397)
..+.+.+-.++.|+++..- ..+. |||.|+..++..++ +|||+++.-... |.+....+- .+...|+
T Consensus 66 GRdtLe~vyA~vf~aE~a~VRpq~i-sGTHAI~~aLfg~L----RpgDell~i~G~PYDTLeevIG~rg~~~gSL~dfgi 140 (416)
T COG4100 66 GRDTLERVYAQVFGAEAALVRPQII-SGTHAIACALFGIL----RPGDELLYITGSPYDTLEEVIGLRGEGQGSLKDFGI 140 (416)
T ss_pred chhHHHHHHHHHhccccceeeeeee-cchhHHHHHHHhcc----CCCCeEEEecCCcchhHHHHhccCCCCcccHHHhCc
Confidence 4566788889999987432 2332 67789999999999 799999755443 333333322 2233477
Q ss_pred EEEEeccCCCCCCCHHHHHHHhcCCceEEEEeccc----CcccccccHHHHHHHHHhc--CcEEEEecccccCccccccC
Q psy8850 112 RVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVN----NEIGVIQPILEIGELCRSK--GVIFHCDAAQAVGKIDINIQ 185 (397)
Q Consensus 112 ~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~----~~tG~~~~l~~i~~l~~~~--gi~livD~a~~~~~~~~~~~ 185 (397)
....+|+..+|.+|.+.+...++++|++|.+.-.. -|.=.+.++++++.+.|+- ++.++||++|+-........
T Consensus 141 ~Y~~v~Lt~~gkiD~~~v~~~i~~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGEFvE~~EPt 220 (416)
T COG4100 141 KYKAVPLTADGKIDIQAVKTAISDRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGEFVEEKEPT 220 (416)
T ss_pred ceeecccccCCcccHHHHHHhcCccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccchhhhhccCcc
Confidence 88899999999999999999999999999876432 1122333466777777764 89999999999655555556
Q ss_pred cccccEEEeccccc-cCCC--CceEEEEecCCCCc
Q psy8850 186 NYKVDLMSFSAHKI-YGPK--GIGALYIRRNPRTR 217 (397)
Q Consensus 186 ~~~~d~~~~s~~K~-~g~~--g~g~~~~~~~~~~~ 217 (397)
..++|++.+|+-|. .|.. ..|++..+.++.+.
T Consensus 221 ~vGaDliAGSLIKNpGGgiaktGGYiaGk~~~ve~ 255 (416)
T COG4100 221 HVGADLIAGSLIKNPGGGIAKTGGYIAGKAELVEA 255 (416)
T ss_pred ccchhhhccceeeCCCCceeeccceeechHHHHHh
Confidence 66999999999994 3321 24888888765544
No 391
>KOG2040|consensus
Probab=98.93 E-value=1.2e-07 Score=89.22 Aligned_cols=284 Identities=15% Similarity=0.115 Sum_probs=177.4
Q ss_pred HHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHHhh-CCcEEEEeccCC
Q psy8850 42 AIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLEN-DGFRVTYLKPKN 120 (397)
Q Consensus 42 ~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~-~g~~v~~v~~~~ 120 (397)
.+...+..++++.|.+..+.-+-.-||.|-++++.+... .++.++++...+|+-+...+..-.. .|++++..+..
T Consensus 164 sllNyQTmi~dlTGL~~aNASLLDEgTAaaEAm~l~~~~---~krkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~~~~~- 239 (1001)
T KOG2040|consen 164 SLLNYQTMITDLTGLPMANASLLDEGTAAAEAMALCNRI---NKRKKFVVDSNCHPQTLSVVKTRAKGFGIKVVVSDIK- 239 (1001)
T ss_pred HHhhhHHhhhhccCCcccchhhhccchhHHHHHHHHHhh---cccceEEecCCCCcchhhhhhccccccceeEEecCHH-
Confidence 344568889999999887877777777777766665443 4567799999999999888775333 25554433322
Q ss_pred CCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCccccccCcccccEEEecccccc
Q psy8850 121 NGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIY 200 (397)
Q Consensus 121 ~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~~s~~K~~ 200 (397)
+.. ...++...+++..|.+. |.+.+..++++.+++.|..+++-.---.-.+--...++++|+.++|.+.++
T Consensus 240 -------~~~-~s~~~v~gvlvQYP~t~-G~i~d~~el~~~a~~~~s~vv~atDLLaLtiLrpPgefGaDIavGSsQRFG 310 (1001)
T KOG2040|consen 240 -------EAD-YSSKDVSGVLVQYPDTE-GSVLDFDELVELAHANGSLVVMATDLLALTILRPPGEFGADIAVGSSQRFG 310 (1001)
T ss_pred -------Hhh-ccccceeEEEEEcCCCC-CcccCHHHHHHHhhccCceEEEeehhhHHHccCChhhcCceeeeccccccC
Confidence 111 11235677778777654 899999999999999998876643322222222345669999999999975
Q ss_pred CCCC-----ceEEEEecCCCCccccccccC-----------------CccccccCCCCchhHHHHHHHHHHHH------H
Q psy8850 201 GPKG-----IGALYIRRNPRTRIEAQIHGG-----------------GHEYGLRSGTLATHQIVGMGEAFRLA------R 252 (397)
Q Consensus 201 g~~g-----~g~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~l~~al~~~------~ 252 (397)
.|.| .||+.++.++...+.-.+.|- .+..+....|.|....-++.+-+.-+ .
T Consensus 311 VPlGYGGPHAaFfAv~~~l~R~mPGRiiGvtkD~~gk~a~RLALQTREQHIrRDKATSNICTAQALLANmaAmyaiYHGp 390 (1001)
T KOG2040|consen 311 VPLGYGGPHAAFFAVSESLVRMMPGRIIGVTKDALGKEAYRLALQTREQHIRRDKATSNICTAQALLANMAAMYAIYHGP 390 (1001)
T ss_pred ccccCCCchHHHHHHHHHHHhhCCCceEeeeecccccHHHHHHHHHHHHHhhhhccchhhhHHHHHHHHHHHHHhhhcCc
Confidence 5544 455555533322222211110 11122334566655444443332221 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCCCCCCCceEEEEecCCChHHHHHHhC--CcEecccCccCCCCCChhh
Q psy8850 253 IEMKEELKRILFLQKRLYNGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAIK--DIAVSSGSACTSASLEPSY 330 (397)
Q Consensus 253 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~i~~~~g~~~~~~~~~~~~ 330 (397)
.+++++.+++......|..+|++ .+.++.... ..-.+.+.... +.+++..+.. ++.++.-
T Consensus 391 ~gL~~IArrvh~~T~~l~~~l~~--aghel~~k~---fFDTLkI~~~~-s~~~~l~rA~~~~iNlr~~------------ 452 (1001)
T KOG2040|consen 391 HGLKEIARRVHNLTLILAEGLKN--AGHELQHKP---FFDTLKIRCGC-SAEEVLDRAAKRQINLRLV------------ 452 (1001)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhh--cchhhcccc---ccceEEEEecC-cHHHHHHHHHhhcCceEEe------------
Confidence 47899999999999999999998 555555431 12233444443 4555554433 3333210
Q ss_pred HHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHH
Q psy8850 331 VLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLK 367 (397)
Q Consensus 331 ~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~ 367 (397)
..+.|-+++-...+++|+|.++..+.
T Consensus 453 -----------ed~tigvslDETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 453 -----------EDGTIGVSLDETVTEKDVDDLLWVFN 478 (1001)
T ss_pred -----------ecCceEEeecccccHHHHHHHHHHHc
Confidence 12778899988899999999998876
No 392
>KOG1411|consensus
Probab=98.76 E-value=1.3e-07 Score=82.61 Aligned_cols=264 Identities=17% Similarity=0.177 Sum_probs=160.1
Q ss_pred eCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEecc--CCCCCCCHHHHHHHhcCC---ce
Q psy8850 64 TSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKP--KNNGLITLSQLEEKICSD---TI 138 (397)
Q Consensus 64 ~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~--~~~~~~d~~~l~~~i~~~---~~ 138 (397)
+-|||.|+......+...+ ++..|.++.|.+..+...+... |+.+..+.+ ..+..+|.+.+.+.+.+. .-
T Consensus 126 ~lSGTGaLriga~Fl~~f~--~~~~I~ip~PTWgNh~~if~~a---g~~~~~yrYyd~~t~gld~~g~ledl~~~p~gs~ 200 (427)
T KOG1411|consen 126 TLSGTGALRVGAEFLARFY--PSRDIYIPDPTWGNHKNIFKDA---GLPVKFYRYYDPKTRGLDFKGMLEDLGEAPEGSI 200 (427)
T ss_pred eccCcchhhHHHHHHHhhc--cccceeecCCcccccCcccccc---CcceeeeeeccccccccchHHHHHHHhcCCCCcE
Confidence 4489999988877665543 4789999999999988777776 887766544 245668888877777653 34
Q ss_pred EEEEecccCccccccc---HHHHHHHHHhcCcEEEEecccc-cCccccccCcc---------cccEEEeccccccCCCC-
Q psy8850 139 LVSVMLVNNEIGVIQP---ILEIGELCRSKGVIFHCDAAQA-VGKIDINIQNY---------KVDLMSFSAHKIYGPKG- 204 (397)
Q Consensus 139 ~v~~~~~~~~tG~~~~---l~~i~~l~~~~gi~livD~a~~-~~~~~~~~~~~---------~~d~~~~s~~K~~g~~g- 204 (397)
+++-...|||||+-.. +++|.++.++.+..-+.|-+|- +.+-.++-++. ..-+++.|+.|.+|..|
T Consensus 201 ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~~~laQSyAKNMGLYgE 280 (427)
T KOG1411|consen 201 ILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHEILLAQSYAKNMGLYGE 280 (427)
T ss_pred EEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcCCceEeehhhhhhcchhhh
Confidence 5566678999997443 5778889999999999998864 33333322221 23467889999555433
Q ss_pred -ceEEE--E-ecCCCCccc----cccccCCccccccCCCCchhHH--HHH----HHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8850 205 -IGALY--I-RRNPRTRIE----AQIHGGGHEYGLRSGTLATHQI--VGM----GEAFRLARIEMKEELKRILFLQKRLY 270 (397)
Q Consensus 205 -~g~~~--~-~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~--~~l----~~al~~~~~~~~~~~~~~~~~~~~l~ 270 (397)
.|.+- + +.+...+++ ..+.+ ..+.|+..+. ++. ....+.+...+..+.+++..++..|.
T Consensus 281 RvGa~svvc~~ad~A~rV~SQlk~liRp-------mYSnPP~hGArIv~~Il~d~~l~~~W~~evk~MadRi~~mR~~L~ 353 (427)
T KOG1411|consen 281 RVGALSVVCKDADEAKRVESQLKILIRP-------MYSNPPLHGARIVATILSDPDLKNQWLGEVKGMADRIISMRQQLF 353 (427)
T ss_pred ccceeEEEecCHHHHHHHHHHHHHHhcc-------cccCCCccchhhhhhccCChHHHHHHHHHHHHHHHhhhhhHHHHh
Confidence 34432 2 222222221 11111 1123333322 211 11122333357778899999999999
Q ss_pred HHHhhhcCcEEEeCCCCCCCCceEEEEecCCChHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCccccCceEEE
Q psy8850 271 NGLMESIEEIYINGDMNNRIPHNLNISFNFIEGESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCNDELAHSSIRF 348 (397)
Q Consensus 271 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi 348 (397)
+.|++ .+....-..-. -.+-+|.|-+...+++-...+ .|.+. +-=||
T Consensus 354 d~L~~--~gs~~~W~hI~--~QIGMF~fTgl~peQv~~l~ke~~iYmT---------------------------~dGRi 402 (427)
T KOG1411|consen 354 DALEK--EGSPGNWSHIT--KQIGMFCFTGLNPEQVDWLTKEYHIYLT---------------------------KDGRI 402 (427)
T ss_pred HHhhc--CCCCccHHHHH--HhhheeeecCCCHHHHHHHHhhheeeec---------------------------cCceE
Confidence 99988 33222100000 112245666666666543333 44443 12299
Q ss_pred eeCCCCCHHHHHHHHHHHHHHHH
Q psy8850 349 TIGRFTTEKEIDFTIKLLKMKVK 371 (397)
Q Consensus 349 ~~~~~~~~~~i~~~~~~l~~~~~ 371 (397)
|++. .+...+.++.++|.++.+
T Consensus 403 S~aG-~ss~nV~yLa~aih~vtk 424 (427)
T KOG1411|consen 403 SMAG-LSSSNVPYLADAIHAVTK 424 (427)
T ss_pred eecc-ccccCCcccchhhHhHhc
Confidence 9887 567888999988887654
No 393
>KOG1405|consensus
Probab=98.65 E-value=1.2e-06 Score=76.93 Aligned_cols=205 Identities=18% Similarity=0.230 Sum_probs=125.8
Q ss_pred CHHHHHHHhcC------CceEEEEecccCccccccc----HHHHHHHHHhcCcEEEEecccccCcc--------ccccCc
Q psy8850 125 TLSQLEEKICS------DTILVSVMLVNNEIGVIQP----ILEIGELCRSKGVIFHCDAAQAVGKI--------DINIQN 186 (397)
Q Consensus 125 d~~~l~~~i~~------~~~~v~~~~~~~~tG~~~~----l~~i~~l~~~~gi~livD~a~~~~~~--------~~~~~~ 186 (397)
.++++|++|.+ ...+++++.+++..|--.. ...+.+++++||+.+|+|+++..+.. ..++.
T Consensus 254 Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~- 332 (484)
T KOG1405|consen 254 CLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLD- 332 (484)
T ss_pred HHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCC-
Confidence 46778887753 2458899999999886443 68999999999999999999974332 33433
Q ss_pred ccccEEEecccc-ccCCCCceEEEEecCCCCccccccccCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8850 187 YKVDLMSFSAHK-IYGPKGIGALYIRRNPRTRIEAQIHGGGHEYGLRSGTLATHQIVGMGEAFRLARIEMKEELKRILFL 265 (397)
Q Consensus 187 ~~~d~~~~s~~K-~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~~~ 265 (397)
..+|+++|| | +... |+ +...++...- ++ +.|....-.....+-+...++.+.+ +.+.++....
T Consensus 333 ~PpD~vTFS--KK~q~g---Gf-fh~~~frpn~-pY-------rifNTWmGdP~k~lll~~vv~~I~~--~~Ll~n~~~v 396 (484)
T KOG1405|consen 333 SPPDVVTFS--KKFQTG---GF-FHDEEFRPNE-PY-------RIFNTWMGDPSKNLLLEEVVQEIKR--EDLLNNVAHV 396 (484)
T ss_pred CCccceehh--hhhhcC---cc-ccCcccCCCc-hH-------HHhhhhcCChHHHHHHHHHHHHHhH--HHHHHHHHHH
Confidence 268999888 8 5433 33 3332222111 11 1122223333445555566666655 6677788888
Q ss_pred HHHHHHHHhh---hcCcEEEeCCCCCCCCceEEEEecCCC-hHHHHHHhC--CcEecccCccCCCCCChhhHHHhhCCCc
Q psy8850 266 QKRLYNGLME---SIEEIYINGDMNNRIPHNLNISFNFIE-GESLLMAIK--DIAVSSGSACTSASLEPSYVLRALGCND 339 (397)
Q Consensus 266 ~~~l~~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~~~~~g~~~ 339 (397)
.+.|..+|.+ ..|+. +..-+ ..++++.+.++..+ ...+...++ |+.+- | |.
T Consensus 397 G~~l~~gL~~Lq~~~p~~-~~~~R--GrGTF~a~d~ps~~~Rdk~i~~~~~nGv~~G-G--Cg----------------- 453 (484)
T KOG1405|consen 397 GKALLKGLLELQAKYPGK-INNLR--GRGTFIAWDCPSGSIRDKLILIARLNGVNLG-G--CG----------------- 453 (484)
T ss_pred HHHHHHHHHHHHHhCchh-hhccc--ccceEEEEeCCChHHHHHHHHHHHHcCceec-c--cc-----------------
Confidence 8888887755 12331 11111 23566667766433 234444443 44332 1 11
Q ss_pred cccCceEEEeeCCCCCHHHHHHHHHHHHHHHHH
Q psy8850 340 ELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKK 372 (397)
Q Consensus 340 ~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 372 (397)
...||+.++....+...+-+++.+.+.+..
T Consensus 454 ---~~siRfRPsLvf~~~Ha~i~l~~~~k~l~~ 483 (484)
T KOG1405|consen 454 ---DKSIRFRPSLVFRKHHADIFLDIFDKILAG 483 (484)
T ss_pred ---cceeeeccceeehhhhHHHHHHHHHHHhcc
Confidence 277999998888888899999998887753
No 394
>KOG3843|consensus
Probab=98.29 E-value=3.3e-06 Score=71.37 Aligned_cols=178 Identities=16% Similarity=0.140 Sum_probs=107.6
Q ss_pred HHHHHHHHHHHHhCCC-CCcEEEeCChh-HHHHHHHHHhHhhhccCC-CEEEEcCCCChhhHHHHHHHhhCCcEEEEecc
Q psy8850 42 AIEKARNEVAQLIYAD-PREIIWTSGAT-ESNNLAIKGAAHFYKKRG-KHIITVQTEHKSVLDSIRKLENDGFRVTYLKP 118 (397)
Q Consensus 42 ~~~~~~~~la~~~~~~-~~~i~~~~g~t-~a~~~~l~~l~~~~~~~g-~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~ 118 (397)
+..++...+-.+.|+- ..+.++++=+| ..+.+++.++... +|+ .-|+...-...|....+-.. |++++.+..
T Consensus 58 isne~a~~~i~l~glhav~nc~vvpl~tgmslslc~~s~r~k--rpkakyiiw~ridqks~~ksi~~a---gfepiiie~ 132 (432)
T KOG3843|consen 58 ISNEFAKDAIHLAGLHAVANCFVVPLATGMSLSLCFLSLRHK--RPKAKYIIWLRIDQKSCFKSIIHA---GFEPIIIEN 132 (432)
T ss_pred HHHHHHHHHHHHhhhhhhhceeEEeccccccHHHHHHHHhhc--CCcccEEEEEecchHHHHHHHHhc---CCCceeeec
Confidence 4455666666677752 22444444333 3455666655543 333 45677777778888777777 888777654
Q ss_pred C---CCCCCCHHHHHHHhcC-CceEEEEecccCc---ccccccHHHHHHHHHhcCcEEEEecccccCcccc------ccC
Q psy8850 119 K---NNGLITLSQLEEKICS-DTILVSVMLVNNE---IGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDI------NIQ 185 (397)
Q Consensus 119 ~---~~~~~d~~~l~~~i~~-~~~~v~~~~~~~~---tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~------~~~ 185 (397)
- +.-..|++.+++.+.+ ....|...+..+. .-....+++|..+|..|+++-++..+|+..+..- ...
T Consensus 133 i~d~d~l~tdleav~~~iee~g~dcilci~sttscfapr~pd~leaiaaica~~diphivnnayglqsee~i~~iaa~~~ 212 (432)
T KOG3843|consen 133 ILDGDELITDLEAVEAIIEELGEDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYGLQSEECIHKIAAAAE 212 (432)
T ss_pred cccchHHHHhHHHHHHHHHHhCCceEEEEeecccccCCCCCchHHHHHHHHHccCchhhhccccccchHHHHHHHHHHhh
Confidence 2 2234588888888876 3443433222222 1223338999999999999999999998665310 111
Q ss_pred cccccEEEecccc-ccCCCCceEEEE-ecCCCCcccccccc
Q psy8850 186 NYKVDLMSFSAHK-IYGPKGIGALYI-RRNPRTRIEAQIHG 224 (397)
Q Consensus 186 ~~~~d~~~~s~~K-~~g~~g~g~~~~-~~~~~~~~~~~~~~ 224 (397)
.-.+|.++.|+.| +..|.|.+++.. ++..++.+...++|
T Consensus 213 ~grida~vqsldknf~vpvggaiia~fk~n~iq~iak~ypg 253 (432)
T KOG3843|consen 213 CGRIDAFVQSLDKNFMVPVGGAIIAAFKDNFIQEIAKMYPG 253 (432)
T ss_pred hccHHHHHHHhhhcceeecchhHhhHhHHHHHHHHHHhCCC
Confidence 1157889999999 778887333332 33344445444444
No 395
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=98.01 E-value=3.5e-05 Score=61.81 Aligned_cols=55 Identities=18% Similarity=0.152 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHHhC----CCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChh
Q psy8850 40 EKAIEKARNEVAQLIY----ADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKS 98 (397)
Q Consensus 40 ~~~~~~~~~~la~~~~----~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s 98 (397)
....+.+.+.+.+.+| +++++|++|+|++.|+.+++++++ ++||.|+++.|.|++
T Consensus 95 ~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~----dpGD~VlVp~P~Y~~ 153 (153)
T PLN02994 95 ANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIA----DPGDAFLVPTPYYAA 153 (153)
T ss_pred HHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHc----CCCCEEEEeCCCCCC
Confidence 3455556666666656 467789999999999999999998 899999999999874
No 396
>KOG2142|consensus
Probab=95.81 E-value=0.036 Score=53.48 Aligned_cols=356 Identities=14% Similarity=0.112 Sum_probs=173.8
Q ss_pred CCCCCCCCCHHHHHHHHHHHhh-ccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCC--cEEEeCChhHHHHHHHHHh
Q psy8850 2 DYSATTPIDPRVVDKMIPYLRV-QFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPR--EIIWTSGATESNNLAIKGA 78 (397)
Q Consensus 2 ~~~~~~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~--~i~~~~g~t~a~~~~l~~l 78 (397)
|+++.+...+.-.+.+...... ...||++ ....+..........|-.+..+++...+ .+.++. .++|+..++.++
T Consensus 25 dhag~tl~sesq~~g~~~~sq~~e~~nphs-~~~ts~~l~~~v~Q~r~ril~~f~tta~dy~v~lp~-~t~al~~vae~f 102 (728)
T KOG2142|consen 25 DHAGRTLFSESQLEGVAFQSQSSENANPHS-HLGTSRSLARLVAQVRLRILALFNTTAFDYEVSLPA-LTEALKLVAEAF 102 (728)
T ss_pred HhhhhhhhhhcccchhhhhhhccccCCCcc-cccchHHHHHHHHHHHHHHHHHhccccccccchhHH-HHHHHHHHHHhC
Confidence 4444444444444443333322 2356777 6666666667778888888888886433 477777 999999999988
Q ss_pred HhhhccCCCEEEEcCCCChhhHHHHH-HHh--hCCcEEEEe-ccCC---CCCCCHHHHHHHhcCCceEEEEecccCcccc
Q psy8850 79 AHFYKKRGKHIITVQTEHKSVLDSIR-KLE--NDGFRVTYL-KPKN---NGLITLSQLEEKICSDTILVSVMLVNNEIGV 151 (397)
Q Consensus 79 ~~~~~~~g~~vl~~~~~~~s~~~~~~-~~~--~~g~~v~~v-~~~~---~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~ 151 (397)
... ..+.+|--...++........ .++ -.|+.+..+ ..++ .....+.+...-+ ....+.......|-.|.
T Consensus 103 p~~--s~tekid~lrs~~y~hls~s~~~~~~~~~~~gl~sy~q~~~i~~~~~~sls~~~~~l-s~~~L~~g~a~~nfeg~ 179 (728)
T KOG2142|consen 103 PFY--SQTEKIDNLRSDEYGHLSSSGHLMRLDYSGIGLFSYSQTNEISDSEEFSLSESEANL-SEHSLFGGAAQSNFEGD 179 (728)
T ss_pred ccc--cccccccchhhhhhcccccccceeeeeeeccceEEeeeeeeccccccccccccccCc-ccchhcccchhcccccc
Confidence 643 233444332222222222211 111 113333333 2211 1111111111000 12345555555555555
Q ss_pred cccHHHHHHHHHhcCcEEEEecccccCccccccCcccccEEEeccccccCCCCceEEEEecCCCCcc----ccccccCC-
Q psy8850 152 IQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRI----EAQIHGGG- 226 (397)
Q Consensus 152 ~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~----~~~~~~~~- 226 (397)
.+....+-.+.-..+-++++|++.-....+++...+.+|++.. +.|++|.+. |.+.+..+..+.. ....+.|.
T Consensus 180 kik~ri~d~L~ipe~~y~lldtaSrvSaf~Ldaesy~f~~~~~-lltiFgyet-gAvlv~~r~A~~~Ggkt~sa~f~wp~ 257 (728)
T KOG2142|consen 180 KIKLRIMDRLNIPESEYVLLDTASRVSAFPLDAESYPFDFNPK-LLTIFGYET-GAVLVMNRSAELKGGKTASAEFSWPM 257 (728)
T ss_pred eeeeeeecccccCCceEEEEEeecccccccchHhhCCCcccch-heeecCCCc-hhhHHHhhhhHhhcCccceeecccch
Confidence 4222222222224477899999988888889988889999998 999888653 5555443322221 00111110
Q ss_pred -------ccccccCCCCchhHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhhhc---C-----cEEEeCCCCC
Q psy8850 227 -------HEYGLRSGTLATHQIVGMGEAFRLARI---EMKEELKRILFLQKRLYNGLMESI---E-----EIYINGDMNN 288 (397)
Q Consensus 227 -------~~~~~~~~~~~~~~~~~l~~al~~~~~---~~~~~~~~~~~~~~~l~~~l~~~~---~-----~~~~~~~~~~ 288 (397)
...+++.|+.+.-.++.+...+..... ++..+....-.+.+.+.-.|+..- + +..... +.
T Consensus 258 ~~l~s~~lkkr~e~gk~~~kd~a~gl~vFp~~sRvtG~~ysy~wmt~al~~~whvlLda~~lG~kdmd~yglS~f~--Pd 335 (728)
T KOG2142|consen 258 LYLLSEKLKKRFEDGKLRFKDIAQGLFVFPTQSRVTGGMYSYSWMTLALANNWHVLLDALALGPKDMDSYGLSLFQ--PD 335 (728)
T ss_pred HHHHHHHHHHHHhhccccccchhhheeccchHhhhcccchhHHHHHHHHhhhHHHHHhhhccCcchHhhhhhhccC--cc
Confidence 113344555555444444343333322 234444444444444444444300 0 111111 12
Q ss_pred CCCceEEEEecCCCh----HHHHHH--hCCcEecccCccCCCCCChhh---------HHHhhC-CCccccCceEEEeeCC
Q psy8850 289 RIPHNLNISFNFIEG----ESLLMA--IKDIAVSSGSACTSASLEPSY---------VLRALG-CNDELAHSSIRFTIGR 352 (397)
Q Consensus 289 ~~~~~~~~~~~~~~~----~~~~~~--l~~i~~~~g~~~~~~~~~~~~---------~~~~~g-~~~~~~~~~iRi~~~~ 352 (397)
.....+.+.|...++ .-+++. +.++..+.|-+|..|.++-.. .++..- ..++.+.+ ++ +.
T Consensus 336 fqg~sf~fv~g~d~psgfGcl~VkKs~i~~l~lrtGcfcn~Gack~~pgl~~~~~~~~~~~g~~cgD~dg~~---~s-~~ 411 (728)
T KOG2142|consen 336 FQGPSFYFVFGRDDPSGFGCLEVKKSAISGLELRTGCFCNIGACKIYPGLYLEMSQKGLSAGKGCGDNDGQP---VS-GY 411 (728)
T ss_pred ceeeeEEEEeccCCCCceeeeeeehhhhhceeccCCCCCCCcceeecccccHHHHHHHhhhccccccCCCCc---cc-cc
Confidence 223445555543322 111111 348888888888776443211 011100 11111222 55 66
Q ss_pred CCCHHHHHHHHHHHHHHH
Q psy8850 353 FTTEKEIDFTIKLLKMKV 370 (397)
Q Consensus 353 ~~~~~~i~~~~~~l~~~~ 370 (397)
..+.+++..+.+++..-+
T Consensus 412 ~~~~~~~~a~~~~~v~~~ 429 (728)
T KOG2142|consen 412 MQTPADVGAYLSAQVSDV 429 (728)
T ss_pred ccchhhhhHHHHHhhhhh
Confidence 678899998888776543
No 397
>PLN02672 methionine S-methyltransferase
Probab=85.90 E-value=8.7 Score=41.07 Aligned_cols=132 Identities=11% Similarity=0.047 Sum_probs=74.7
Q ss_pred hhHHHHHHHHHHHHHHHhC------CCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHHhh--
Q psy8850 37 WTAEKAIEKARNEVAQLIY------ADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLEN-- 108 (397)
Q Consensus 37 ~~~~~~~~~~~~~la~~~~------~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~-- 108 (397)
+..+.+...+|..++.++. ..+++|++-++-..|++.+++.+.....-- |+- ++.+-+.-...+...-..
T Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~ 499 (1082)
T PLN02672 422 CEPPAGSKRFRNLIAGFMRIYHHIPLTPDNVVVFPSRAVAIENALRLFSPRLAIV-DEH-LTRWLPKKWLTSLAIENATS 499 (1082)
T ss_pred CCCCccchHHHHHHHHHHHHhcCCcCCccceEEeccHHHHHHHHHHhhChHHHhh-hhh-hhccCCHHHHhHhhhhcccc
Confidence 3344456667777776654 357789999999999999988664211100 111 222333334333333211
Q ss_pred ---CCcEEEEeccCCCCCCCHHHHHHHhcC-CceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecc
Q psy8850 109 ---DGFRVTYLKPKNNGLITLSQLEEKICS-DTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAA 174 (397)
Q Consensus 109 ---~g~~v~~v~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a 174 (397)
.+.+++.+.-.. .-+.+.++++. ++++|+........-+--..+.|.+.+++.|++++.|..
T Consensus 500 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (1082)
T PLN02672 500 DSKSDDVITVIEAPR----QSDLVIELIKKLKPQVVVTGMADFEMRTSTAFEHLLNVTAEIGARLFLDIS 565 (1082)
T ss_pred cCccCCeEEEEeCCC----cchHHHHHHHhCCCeEEEEeccchhhhhHHHHHHHHHHHHhhCcEEEEehh
Confidence 023333333221 12244455544 677776654443333333478899999999999999976
No 398
>KOG0630|consensus
Probab=85.43 E-value=35 Score=32.67 Aligned_cols=189 Identities=16% Similarity=0.209 Sum_probs=100.9
Q ss_pred CEEEEcCCCChhhHHHHHHHhhCCcEEEEecc----CC---CCCCCHHHHHHHhcC-----C-ceEEEEecccCcccccc
Q psy8850 87 KHIITVQTEHKSVLDSIRKLENDGFRVTYLKP----KN---NGLITLSQLEEKICS-----D-TILVSVMLVNNEIGVIQ 153 (397)
Q Consensus 87 ~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~----~~---~~~~d~~~l~~~i~~-----~-~~~v~~~~~~~~tG~~~ 153 (397)
..+++++..|.-...-.. ...|+..+.|.. ++ .|.||...+++.|.+ + +-+++..-..+-.|...
T Consensus 232 Pt~YiS~alh~~l~hYaa--refGIa~~aI~~~~dhdqgeiegriDhh~feKiideDlaagkkPLilia~iGasi~GqnD 309 (838)
T KOG0630|consen 232 PTFYISEALHMDLLHYAA--REFGIADEAIKPILDHDQGEIEGRIDHHLFEKIIDEDLAAGKKPLILIADIGASICGQND 309 (838)
T ss_pred ceEEEcccccHHHHHHHH--HHhCCchhheecccccccccccccccHHHHHHHHHHHHhCCCCCeEEEEeccchhhcchH
Confidence 567777776654432221 122665444322 22 468999999999864 2 33444445555677777
Q ss_pred cHHHHHHHHHhcC-cEEEEecccccCcc----ccccC---cccccEEEeccccccCCCCceEEEEecCCCCccccccccC
Q psy8850 154 PILEIGELCRSKG-VIFHCDAAQAVGKI----DINIQ---NYKVDLMSFSAHKIYGPKGIGALYIRRNPRTRIEAQIHGG 225 (397)
Q Consensus 154 ~l~~i~~l~~~~g-i~livD~a~~~~~~----~~~~~---~~~~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~~~~~~~~ 225 (397)
-+-+|.++|++|+ .|++.-+- +...+ |-+.. .-..|.+.....-|+|.+..-++...+.+.......+..
T Consensus 310 mi~kildi~eahakfWLHasGh-aiAALt~aepnnil~HV~eqldSMal~ialWLGiPSaPiV~LHRPleg~aaSafes- 387 (838)
T KOG0630|consen 310 MILKILDICEAHAKFWLHASGH-AIAALTCAEPNNILGHVEEQLDSMALNIALWLGIPSAPIVLLHRPLEGSAASAFES- 387 (838)
T ss_pred HHHHHHHHHHHhhheeEeeccc-hhhheeecCcccchhHHHHHHhhccchhHHHhCCCCCceEEeecccccccchhccc-
Confidence 7999999999997 88876532 11111 11110 003456665555567755455555543322111111000
Q ss_pred CccccccCCCCchhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhhcCcEEEeCCC
Q psy8850 226 GHEYGLRSGTLATHQIVGMGEAFRLARI-EMKEELKRILFLQKRLYNGLMESIEEIYINGDM 286 (397)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~l~~al~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 286 (397)
....+- . ...+.++.++..+.. -+..+.+..-.+.+.|.+.+.+ .+++.+.+..
T Consensus 388 dpi~re---k---LdaLp~Wta~q~LggKaIadmienAFll~kilfe~aSa-~~eiemig~d 442 (838)
T KOG0630|consen 388 DPILRE---K---LDALPLWTALQALGGKAIADMIENAFLLCKILFEGASA-CEEIEMIGHD 442 (838)
T ss_pred ChHHHH---h---hccchHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhc-CCceeEeccC
Confidence 000000 0 112333344444322 2555666666778888888888 8888887653
No 399
>KOG1465|consensus
Probab=83.34 E-value=33 Score=30.62 Aligned_cols=104 Identities=15% Similarity=0.166 Sum_probs=64.3
Q ss_pred cEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCC--CChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcCCc
Q psy8850 60 EIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQT--EHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDT 137 (397)
Q Consensus 60 ~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~--~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~ 137 (397)
+|++|.|.+..+..-+...... ++.-.|+|.+. .+.+ +.....+...|++.+.++ | .++-+++.+=-
T Consensus 164 EviLT~g~SrTV~~FL~~A~kk--~Rkf~viVaE~~p~~qg-H~~Ak~la~~giettVI~-------d-aaVfA~MsrVn 232 (353)
T KOG1465|consen 164 EVILTLGSSRTVENFLKHAAKK--GRKFRVIVAEGAPNNQG-HELAKPLAQAGIETTVIP-------D-AAVFAMMSRVN 232 (353)
T ss_pred ceEEecCccHHHHHHHHHHHhc--cCceEEEEeecCCcccc-hHhhHHHHHcCCeeEEec-------c-HHHHHHhhhcc
Confidence 6999999887766666655521 24456666542 2233 233333445588877776 3 34445555545
Q ss_pred eEEEEecccCcccccc-c--HHHHHHHHHhcCcEEEEecc
Q psy8850 138 ILVSVMLVNNEIGVIQ-P--ILEIGELCRSKGVIFHCDAA 174 (397)
Q Consensus 138 ~~v~~~~~~~~tG~~~-~--l~~i~~l~~~~gi~livD~a 174 (397)
++|+-++.-.+.|.+. + ...++..||+|-++|++=+.
T Consensus 233 KVIigt~avl~NGgl~~~~G~~~vAlaAk~h~vPv~VlAp 272 (353)
T KOG1465|consen 233 KVIIGTHAVLANGGLRAPSGVHTVALAAKHHSVPVIVLAP 272 (353)
T ss_pred eEEEEeeeEecCCCeeccchHHHHHHHHHhcCCcEEEecc
Confidence 6777776666655443 3 46788888899999988654
No 400
>COG0656 ARA1 Aldo/keto reductases, related to diketogulonate reductase [General function prediction only]
Probab=79.12 E-value=34 Score=30.52 Aligned_cols=140 Identities=11% Similarity=0.114 Sum_probs=74.3
Q ss_pred HHHHHHHHHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeC---C----hh---HHHHHHHHHhHhhh
Q psy8850 13 VVDKMIPYLRVQFGNPASRNHIYGWTAEKAIEKARNEVAQLIYADPREIIWTS---G----AT---ESNNLAIKGAAHFY 82 (397)
Q Consensus 13 v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~---g----~t---~a~~~~l~~l~~~~ 82 (397)
..+++..++.. |..+- .-..-|. -.+.+-++|++ -|++.+++++|+ . -. .|++..+.-+..
T Consensus 30 ~~~av~~Al~~--Gyr~I-DTA~~Yg---nE~~VG~aI~~-s~v~ReelFittKvw~~~~~~~~~~~a~e~Sl~rLg~-- 100 (280)
T COG0656 30 AVRAVRAALEL--GYRLI-DTAEIYG---NEEEVGEAIKE-SGVPREELFITTKVWPSDLGYDETLKALEASLKRLGL-- 100 (280)
T ss_pred HHHHHHHHHHh--CcceE-ecHhHhc---CHHHHHHHHHh-cCCCHHHeEEEeecCCccCCcchHHHHHHHHHHHhCC--
Confidence 77888888765 22211 1111222 24446666666 777878888887 1 11 233333332221
Q ss_pred ccCCCEEEEcCCC---Ch---hhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcCC---ceEEEEecccCcccccc
Q psy8850 83 KKRGKHIITVQTE---HK---SVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSD---TILVSVMLVNNEIGVIQ 153 (397)
Q Consensus 83 ~~~g~~vl~~~~~---~~---s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~---~~~v~~~~~~~~tG~~~ 153 (397)
.-=|-.++.-|. +. .+..+++.+...| .+..|.+.. .+.+.|++++... +.+.=++ ..-..
T Consensus 101 -dyvDLyLiHwP~~~~~~~~~etw~alE~l~~~G-~ir~IGVSN---F~~~~L~~l~~~~~~~p~~NQIe-----~hp~~ 170 (280)
T COG0656 101 -DYVDLYLIHWPVPNKYVVIEETWKALEELVDEG-LIRAIGVSN---FGVEHLEELLSLAKVKPAVNQIE-----YHPYL 170 (280)
T ss_pred -CceeEEEECCCCCccCccHHHHHHHHHHHHhcC-CccEEEeeC---CCHHHHHHHHHhcCCCCceEEEE-----eccCC
Confidence 112566666663 33 3334444443334 666666542 4778888887652 2222111 11223
Q ss_pred cHHHHHHHHHhcCcEEEE
Q psy8850 154 PILEIGELCRSKGVIFHC 171 (397)
Q Consensus 154 ~l~~i~~l~~~~gi~liv 171 (397)
+-.++.++|+++|+.+..
T Consensus 171 ~q~el~~~~~~~gI~v~A 188 (280)
T COG0656 171 RQPELLPFCQRHGIAVEA 188 (280)
T ss_pred CcHHHHHHHHHcCCEEEE
Confidence 445699999999998764
No 401
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=78.75 E-value=45 Score=29.22 Aligned_cols=124 Identities=9% Similarity=0.041 Sum_probs=69.9
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCC
Q psy8850 41 KAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN 120 (397)
Q Consensus 41 ~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~ 120 (397)
+.+..+.+. ++-+|.+ ++.+.-....++.+.. .. |.+-+....-.. ...+..+++.| +++.+....
T Consensus 66 ~gl~~L~~~-~~~~Gl~---~~Tev~d~~~v~~~~e-~v-------dilqIgs~~~~n-~~LL~~va~tg-kPVilk~G~ 131 (250)
T PRK13397 66 QGIRYLHEV-CQEFGLL---SVSEIMSERQLEEAYD-YL-------DVIQVGARNMQN-FEFLKTLSHID-KPILFKRGL 131 (250)
T ss_pred HHHHHHHHH-HHHcCCC---EEEeeCCHHHHHHHHh-cC-------CEEEECcccccC-HHHHHHHHccC-CeEEEeCCC
Confidence 455555544 6677776 4444444455665555 23 344443332222 33344444434 344443321
Q ss_pred CCCCCHHHHHHHhcC-----CceEEEEe----cccCcccccccHHHHHHHHHhcCcEEEEecccccCcc
Q psy8850 121 NGLITLSQLEEKICS-----DTILVSVM----LVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKI 180 (397)
Q Consensus 121 ~~~~d~~~l~~~i~~-----~~~~v~~~----~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~ 180 (397)
..++++++.+++. +..+++.. ...+++-...++..|..+.+..+++|++|.+|+.|..
T Consensus 132 --~~t~~e~~~A~e~i~~~Gn~~i~L~eRg~~~Y~~~~~n~~dl~ai~~lk~~~~lPVivd~SHs~G~r 198 (250)
T PRK13397 132 --MATIEEYLGALSYLQDTGKSNIILCERGVRGYDVETRNMLDIMAVPIIQQKTDLPIIVDVSHSTGRR 198 (250)
T ss_pred --CCCHHHHHHHHHHHHHcCCCeEEEEccccCCCCCccccccCHHHHHHHHHHhCCCeEECCCCCCccc
Confidence 4577887776642 44555554 2223334467788888888879999999999997753
No 402
>COG1504 Uncharacterized conserved protein [Function unknown]
Probab=73.85 E-value=9.9 Score=28.12 Aligned_cols=50 Identities=22% Similarity=0.195 Sum_probs=41.8
Q ss_pred CCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecc
Q psy8850 123 LITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAA 174 (397)
Q Consensus 123 ~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a 174 (397)
.+++++++..+.+++-.+++-.. ..|.+.-.++..+++++.++-|++--+
T Consensus 48 kl~~eEle~~lee~~E~ivvGTG--~~G~l~l~~ea~e~~r~k~~~vi~~pT 97 (121)
T COG1504 48 KLALEELEELLEEGPEVIVVGTG--QSGMLELSEEAREFFRKKGCEVIELPT 97 (121)
T ss_pred ccCHHHHHHHHhcCCcEEEEecC--ceeEEEeCHHHHHHHHhcCCeEEEeCC
Confidence 47899999999999998888544 478888889999999999988887644
No 403
>PF01008 IF-2B: Initiation factor 2 subunit family; InterPro: IPR000649 Initiation factor 2 binds to Met-tRNA, GTP and the small ribosomal subunit. The eukaryotic translation initiation factor EIF-2B is a complex made up of five different subunits, alpha, beta, gamma, delta and epsilon, and catalyses the exchange of EIF-2-bound GDP for GTP. This family includes initiation factor 2B alpha, beta and delta subunits from eukaryotes; related proteins from archaebacteria and IF-2 from prokaryotes and also contains a subfamily of proteins in eukaryotes, archaeae (e.g. Pyrococcus furiosus), or eubacteria such as Bacillus subtilis and Thermotoga maritima. Many of these proteins were initially annotated as putative translation initiation factors despite the fact that there is no evidence for the requirement of an IF2 recycling factor in prokaryotic translation initiation. Recently, one of these proteins from B. subtilis has been functionally characterised as a 5-methylthioribose-1-phosphate isomerase (MTNA) []. This enzyme participates in the methionine salvage pathway catalysing the isomerisation of 5-methylthioribose-1-phosphate to 5-methylthioribulose-1-phosphate []. The methionine salvage pathway leads to the synthesis of methionine from methylthioadenosine, the end product of the spermidine and spermine anabolism in many species.; GO: 0044237 cellular metabolic process; PDB: 1VB5_A 1T5O_D 3A11_E 3VM6_C 1W2W_A 1T9K_A 3ECS_B 2YRF_A 2YVK_B 2A0U_A ....
Probab=71.76 E-value=71 Score=28.51 Aligned_cols=108 Identities=13% Similarity=0.074 Sum_probs=53.8
Q ss_pred CCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCC--CChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhc
Q psy8850 57 DPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQT--EHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKIC 134 (397)
Q Consensus 57 ~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~--~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~ 134 (397)
.....++|.|-+..+..++...... +++-+|++.+. ...+ ...+..+...|+.++.++-. .+-..+.
T Consensus 106 ~~~~~ILT~~~S~~v~~~l~~a~~~--~~~~~V~v~es~P~~eG-~~~a~~L~~~gi~v~~i~d~--------~~~~~m~ 174 (282)
T PF01008_consen 106 NDGDTILTHGYSSTVERFLLSAKKK--GKKFRVIVLESRPYNEG-RLMAKELAEAGIPVTLIPDS--------AVGYVMP 174 (282)
T ss_dssp -TTEEEEEES--SHHHHHHHHHHHT--TEEEEEEEE--TTTTHH-HTHHHHHHHTT-EEEEE-GG--------GHHHHHH
T ss_pred cCCeEEEEeCCchHHHHHHHHHHHc--CCeEEEEEccCCcchhh-hhHHHHhhhcceeEEEEech--------HHHHHHH
Confidence 4456888888887766666654311 23345555543 2233 23445555669999988743 2222233
Q ss_pred CCce-EEEEecccCccccccc---HHHHHHHHHhcCcEEEEeccc
Q psy8850 135 SDTI-LVSVMLVNNEIGVIQP---ILEIGELCRSKGVIFHCDAAQ 175 (397)
Q Consensus 135 ~~~~-~v~~~~~~~~tG~~~~---l~~i~~l~~~~gi~livD~a~ 175 (397)
++.. +++=...-.+.|.+.. -..++-+||++++++++=+-.
T Consensus 175 ~~vd~VliGad~v~~nG~v~nk~Gt~~~a~~Ak~~~vPv~v~~~~ 219 (282)
T PF01008_consen 175 RDVDKVLIGADAVLANGGVVNKVGTLQLALAAKEFNVPVYVLAES 219 (282)
T ss_dssp CTESEEEEE-SEEETTS-EEEETTHHHHHHHHHHTT-EEEEE--G
T ss_pred HhCCeeEEeeeEEecCCCEeehhhHHHHHHHHHhhCCCEEEEccc
Confidence 3233 3333333344564443 356777899999998886443
No 404
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=71.15 E-value=17 Score=27.47 Aligned_cols=68 Identities=12% Similarity=0.169 Sum_probs=45.9
Q ss_pred HHHHhhCCcEEEEeccCCCCCCCHHHHHHHhc-CCceEEEEecccCcccccccHHHHHHHHHhc--CcEEEEecccc
Q psy8850 103 IRKLENDGFRVTYLKPKNNGLITLSQLEEKIC-SDTILVSVMLVNNEIGVIQPILEIGELCRSK--GVIFHCDAAQA 176 (397)
Q Consensus 103 ~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~-~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~--gi~livD~a~~ 176 (397)
...+.+.|.++..++.+ .+.+++.+.+. .++.+|.++... +.......++++..|+. ++.+++=+.+.
T Consensus 21 a~~l~~~G~~v~~~d~~----~~~~~l~~~~~~~~pd~V~iS~~~--~~~~~~~~~l~~~~k~~~p~~~iv~GG~~~ 91 (121)
T PF02310_consen 21 AAYLRKAGHEVDILDAN----VPPEELVEALRAERPDVVGISVSM--TPNLPEAKRLARAIKERNPNIPIVVGGPHA 91 (121)
T ss_dssp HHHHHHTTBEEEEEESS----B-HHHHHHHHHHTTCSEEEEEESS--STHHHHHHHHHHHHHTTCTTSEEEEEESSS
T ss_pred HHHHHHCCCeEEEECCC----CCHHHHHHHHhcCCCcEEEEEccC--cCcHHHHHHHHHHHHhcCCCCEEEEECCch
Confidence 33445569999988765 34577777654 578898887642 33444567777777776 88888877664
No 405
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=70.95 E-value=44 Score=28.65 Aligned_cols=63 Identities=13% Similarity=0.085 Sum_probs=37.8
Q ss_pred HHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEE
Q psy8850 103 IRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHC 171 (397)
Q Consensus 103 ~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~liv 171 (397)
...+...|.+++..+.+ |.+.|.+++..-..++++....+ .....--..+++.|++.|+..++
T Consensus 37 ~~~l~~~g~~vv~~d~~-----~~~~l~~al~g~d~v~~~~~~~~-~~~~~~~~~li~Aa~~agVk~~v 99 (233)
T PF05368_consen 37 AQQLQALGAEVVEADYD-----DPESLVAALKGVDAVFSVTPPSH-PSELEQQKNLIDAAKAAGVKHFV 99 (233)
T ss_dssp HHHHHHTTTEEEES-TT------HHHHHHHHTTCSEEEEESSCSC-CCHHHHHHHHHHHHHHHT-SEEE
T ss_pred hhhhhcccceEeecccC-----CHHHHHHHHcCCceEEeecCcch-hhhhhhhhhHHHhhhccccceEE
Confidence 34444459988877666 88999999886555555544333 11222246788889888875554
No 406
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=70.89 E-value=11 Score=34.95 Aligned_cols=80 Identities=14% Similarity=0.090 Sum_probs=49.7
Q ss_pred EEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCC-CCHHHHHHHhcC---CceEEEEecccCcccccccHHHHHHHHHhc
Q psy8850 90 ITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGL-ITLSQLEEKICS---DTILVSVMLVNNEIGVIQPILEIGELCRSK 165 (397)
Q Consensus 90 l~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~-~d~~~l~~~i~~---~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~ 165 (397)
++..+.+++....--... .-++..++.++... .+.+.|.+.+.+ +..+++++.. .-|.+.+.+.+.++||+.
T Consensus 95 l~~~~~r~T~~K~Rv~s~--nQQllRvD~Ee~~~~~~~~~ll~~~~~~l~~~~~vVLSDY--~KG~L~~~q~~I~~ar~~ 170 (467)
T COG2870 95 LLRDKNRPTIVKLRVLSR--NQQLLRLDFEEKFPIEDENKLLEKIKNALKSFDALVLSDY--AKGVLTNVQKMIDLAREA 170 (467)
T ss_pred eEeecCCCceeeeeeecc--cceEEEecccccCcchhHHHHHHHHHHHhhcCCEEEEecc--ccccchhHHHHHHHHHHc
Confidence 444455555543322211 33555566554332 234444444443 4567777654 478999999999999999
Q ss_pred CcEEEEec
Q psy8850 166 GVIFHCDA 173 (397)
Q Consensus 166 gi~livD~ 173 (397)
|+++++|-
T Consensus 171 ~~pVLvDP 178 (467)
T COG2870 171 GIPVLVDP 178 (467)
T ss_pred CCcEEECC
Confidence 99999994
No 407
>COG0108 RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism]
Probab=69.58 E-value=9.7 Score=31.72 Aligned_cols=37 Identities=16% Similarity=0.195 Sum_probs=29.9
Q ss_pred cCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEE
Q psy8850 134 CSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHC 171 (397)
Q Consensus 134 ~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~liv 171 (397)
.-.|..|+.+ ..|+.|.....+++.++|++||++++.
T Consensus 154 Gl~Pa~VicE-i~~~dG~mar~~~~~~fa~~h~l~~it 190 (203)
T COG0108 154 GLKPAGVICE-IMNDDGTMARLPELEEFAKEHGLPVIT 190 (203)
T ss_pred CCCCcEEEEE-EeCCCccccChHHHHHHHHHcCCcEEE
Confidence 3456666555 678899999999999999999998863
No 408
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=69.55 E-value=96 Score=28.78 Aligned_cols=124 Identities=12% Similarity=0.005 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCC
Q psy8850 41 KAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN 120 (397)
Q Consensus 41 ~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~ 120 (397)
+.+..++ ..++-+|.+ ++.+.-....++.+... . |.+-+....-.. ...+..+++.| +++.+...
T Consensus 152 ~gl~~L~-~~~~e~Gl~---~~tev~d~~~v~~~~~~-~-------d~lqIga~~~~n-~~LL~~va~t~-kPVllk~G- 216 (352)
T PRK13396 152 SALELLA-AAREATGLG---IITEVMDAADLEKIAEV-A-------DVIQVGARNMQN-FSLLKKVGAQD-KPVLLKRG- 216 (352)
T ss_pred HHHHHHH-HHHHHcCCc---EEEeeCCHHHHHHHHhh-C-------CeEEECcccccC-HHHHHHHHccC-CeEEEeCC-
Confidence 3444343 356667776 55555555556665552 3 444443332222 33445554434 34444433
Q ss_pred CCCCCHHHHHHHhc-----CCceEEEEec-----ccCcccccccHHHHHHHHHhcCcEEEEecccccCcc
Q psy8850 121 NGLITLSQLEEKIC-----SDTILVSVML-----VNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKI 180 (397)
Q Consensus 121 ~~~~d~~~l~~~i~-----~~~~~v~~~~-----~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~ 180 (397)
...+++++..+++ .+..++++.. .++.+-...++..|..+.+..+++||+|.+|+.|..
T Consensus 217 -~~~t~ee~~~A~e~i~~~Gn~~viL~erG~rtf~s~y~~~~~dl~ai~~lk~~~~lPVi~DpsH~~G~s 285 (352)
T PRK13396 217 -MAATIDEWLMAAEYILAAGNPNVILCERGIRTFDRQYTRNTLDLSVIPVLRSLTHLPIMIDPSHGTGKS 285 (352)
T ss_pred -CCCCHHHHHHHHHHHHHcCCCeEEEEecCCccCcCCCCCCCcCHHHHHHHHHhhCCCEEECCcccCCcH
Confidence 2237777777653 2455665544 212234667789999887777999999999998653
No 409
>PRK06372 translation initiation factor IF-2B subunit delta; Provisional
Probab=69.26 E-value=80 Score=27.76 Aligned_cols=98 Identities=15% Similarity=0.100 Sum_probs=55.4
Q ss_pred CcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcC--CCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcCC
Q psy8850 59 REIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQ--TEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSD 136 (397)
Q Consensus 59 ~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~--~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~ 136 (397)
+++++|.|.+..+...+... +++..|++.+ |.+.+. .....+...|++++.++-. .+...+. +
T Consensus 87 ~dvILT~s~S~~v~~~l~~~-----~~~~~V~v~ESrP~~eG~-~~a~~L~~~GI~vtli~Ds--------a~~~~m~-~ 151 (253)
T PRK06372 87 DSVIGTISSSQVLKAFISSS-----EKIKSVYILESRPMLEGI-DMAKLLVKSGIDVVLLTDA--------SMCEAVL-N 151 (253)
T ss_pred CCEEEEeCCcHHHHHHHHhc-----CCCCEEEEecCCCchHHH-HHHHHHHHCCCCEEEEehh--------HHHHHHH-h
Confidence 35888888777666665432 3435666654 444443 3444555568888877632 1222222 3
Q ss_pred ceEEEE-ecccCccccccc---HHHHHHHHHhcCcEEEE
Q psy8850 137 TILVSV-MLVNNEIGVIQP---ILEIGELCRSKGVIFHC 171 (397)
Q Consensus 137 ~~~v~~-~~~~~~tG~~~~---l~~i~~l~~~~gi~liv 171 (397)
...|++ ...-...|.+.. --.++-.|+++++++++
T Consensus 152 vd~VlvGAd~V~~nG~v~nkvGT~~~Al~A~~~~vPv~V 190 (253)
T PRK06372 152 VDAVIVGSDSVLYDGGLIHKNGTFPLALCARYLKKPFYS 190 (253)
T ss_pred CCEEEECccEEecCCCEeehhhHHHHHHHHHHcCCCEEE
Confidence 333333 222234454444 34577778999999998
No 410
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=68.69 E-value=7.8 Score=29.98 Aligned_cols=40 Identities=18% Similarity=0.110 Sum_probs=25.4
Q ss_pred HHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEe
Q psy8850 127 SQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCD 172 (397)
Q Consensus 127 ~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD 172 (397)
+.+++.+..++.+++++... .+.+.+.++|++++++|+.=
T Consensus 72 ~~l~~l~~~~~P~iIvt~~~------~~p~~l~e~a~~~~ipll~t 111 (127)
T PF02603_consen 72 ERLEKLFSYNPPCIIVTRGL------EPPPELIELAEKYNIPLLRT 111 (127)
T ss_dssp CHHHHHCTTT-S-EEEETTT---------HHHHHHHHHCT--EEEE
T ss_pred HHHHHHhCCCCCEEEEECcC------CCCHHHHHHHHHhCCcEEEc
Confidence 34556666789999998653 56789999999999988754
No 411
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=68.63 E-value=25 Score=27.67 Aligned_cols=78 Identities=15% Similarity=0.174 Sum_probs=52.5
Q ss_pred CCCEEEEcCCCChhhHHHHHH----HhhCCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHH
Q psy8850 85 RGKHIITVQTEHKSVLDSIRK----LENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGE 160 (397)
Q Consensus 85 ~g~~vl~~~~~~~s~~~~~~~----~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~ 160 (397)
++.+|++......++...... +...|+++...+..++. -+.+.+++.++..+|.++..+ .|-....+.+++
T Consensus 11 ~rprvlvak~GlDgHd~gakvia~~l~d~GfeVi~~g~~~tp---~e~v~aA~~~dv~vIgvSsl~--g~h~~l~~~lve 85 (143)
T COG2185 11 ARPRVLVAKLGLDGHDRGAKVIARALADAGFEVINLGLFQTP---EEAVRAAVEEDVDVIGVSSLD--GGHLTLVPGLVE 85 (143)
T ss_pred CCceEEEeccCccccccchHHHHHHHHhCCceEEecCCcCCH---HHHHHHHHhcCCCEEEEEecc--chHHHHHHHHHH
Confidence 346677766655555443333 33459999888776432 455667778888888887653 455666899999
Q ss_pred HHHhcCc
Q psy8850 161 LCRSKGV 167 (397)
Q Consensus 161 l~~~~gi 167 (397)
.++++|.
T Consensus 86 ~lre~G~ 92 (143)
T COG2185 86 ALREAGV 92 (143)
T ss_pred HHHHhCC
Confidence 9999976
No 412
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=67.37 E-value=48 Score=30.27 Aligned_cols=126 Identities=17% Similarity=0.280 Sum_probs=71.3
Q ss_pred hHhhhccCCCEEEEcCCCChhhHHHHH-HH----hhCCcEEEEeccCCC-CCCCHHHHHHHhcCCceEEEEecc---cCc
Q psy8850 78 AAHFYKKRGKHIITVQTEHKSVLDSIR-KL----ENDGFRVTYLKPKNN-GLITLSQLEEKICSDTILVSVMLV---NNE 148 (397)
Q Consensus 78 l~~~~~~~g~~vl~~~~~~~s~~~~~~-~~----~~~g~~v~~v~~~~~-~~~d~~~l~~~i~~~~~~v~~~~~---~~~ 148 (397)
+..++.+.|..|++... .++..++. .+ .+.|..++.-+...+ -.+-.++++.+..++..+|++... ||-
T Consensus 159 LA~~l~~~g~~VllaA~--DTFRAaAiEQL~~w~er~gv~vI~~~~G~DpAaVafDAi~~Akar~~DvvliDTAGRLhnk 236 (340)
T COG0552 159 LAKYLKQQGKSVLLAAG--DTFRAAAIEQLEVWGERLGVPVISGKEGADPAAVAFDAIQAAKARGIDVVLIDTAGRLHNK 236 (340)
T ss_pred HHHHHHHCCCeEEEEec--chHHHHHHHHHHHHHHHhCCeEEccCCCCCcHHHHHHHHHHHHHcCCCEEEEeCcccccCc
Confidence 33344477777777554 23333322 22 233667665432211 124467788888889999988863 233
Q ss_pred ccccccHHHHHHHHHhcC------cEEEEecccccCcc----ccccCcccccEEEeccccccC-CCCceEEE
Q psy8850 149 IGVIQPILEIGELCRSKG------VIFHCDAAQAVGKI----DINIQNYKVDLMSFSAHKIYG-PKGIGALY 209 (397)
Q Consensus 149 tG~~~~l~~i~~l~~~~g------i~livD~a~~~~~~----~~~~~~~~~d~~~~s~~K~~g-~~g~g~~~ 209 (397)
......+++|.+++++.. ++++.|+..+--.+ .++ ...+.|-++.+ |+=| ..| |+++
T Consensus 237 ~nLM~EL~KI~rV~~k~~~~ap~e~llvlDAttGqnal~QAk~F~-eav~l~GiIlT--KlDgtAKG-G~il 304 (340)
T COG0552 237 KNLMDELKKIVRVIKKDDPDAPHEILLVLDATTGQNALSQAKIFN-EAVGLDGIILT--KLDGTAKG-GIIL 304 (340)
T ss_pred hhHHHHHHHHHHHhccccCCCCceEEEEEEcccChhHHHHHHHHH-HhcCCceEEEE--ecccCCCc-ceee
Confidence 333344788888888764 78888988662221 111 12356777766 9544 544 4444
No 413
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=67.15 E-value=85 Score=27.34 Aligned_cols=94 Identities=6% Similarity=0.021 Sum_probs=54.3
Q ss_pred hHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEe---ccCCC---CCCCHHHHHHHhc----CCc
Q psy8850 68 TESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYL---KPKNN---GLITLSQLEEKIC----SDT 137 (397)
Q Consensus 68 t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v---~~~~~---~~~d~~~l~~~i~----~~~ 137 (397)
+.|+..++..+. -+..-+++++.-.-.....+.+...|+++..+ ...++ +.++++.+.+++. ++.
T Consensus 108 ~~A~~~AL~alg-----~~RIalvTPY~~~v~~~~~~~l~~~G~eV~~~~~~~~~~~~~ia~i~p~~i~~~~~~~~~~~a 182 (239)
T TIGR02990 108 SSAAVDGLAALG-----VRRISLLTPYTPETSRPMAQYFAVRGFEIVNFTCLGLTDDREMARISPDCIVEAALAAFDPDA 182 (239)
T ss_pred HHHHHHHHHHcC-----CCEEEEECCCcHHHHHHHHHHHHhCCcEEeeeeccCCCCCceeeecCHHHHHHHHHHhcCCCC
Confidence 345555555542 33344555444444444445566679998876 22222 3688999888775 356
Q ss_pred eEEEEecccCcccccccHHHHHHHHHhcCcEEEE
Q psy8850 138 ILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHC 171 (397)
Q Consensus 138 ~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~liv 171 (397)
.+|+++..+ ...++-|.++=++.|.+|+-
T Consensus 183 DAifisCTn-----Lrt~~vi~~lE~~lGkPVls 211 (239)
T TIGR02990 183 DALFLSCTA-----LRAATCAQRIEQAIGKPVVT 211 (239)
T ss_pred CEEEEeCCC-----chhHHHHHHHHHHHCCCEEE
Confidence 788776322 22355566666777888843
No 414
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=66.98 E-value=98 Score=27.92 Aligned_cols=104 Identities=17% Similarity=0.165 Sum_probs=59.3
Q ss_pred CCCcEEEeCChhHHHHHHHHHhHhhhccCCC--EEEEcC--CCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHH
Q psy8850 57 DPREIIWTSGATESNNLAIKGAAHFYKKRGK--HIITVQ--TEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEK 132 (397)
Q Consensus 57 ~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~--~vl~~~--~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~ 132 (397)
...++++|.|.+.+...++.... +++. +|++.+ |.+.+.. .+..+...|+.++.|+-. +....
T Consensus 118 ~dg~~IlTh~~S~~v~~~l~~A~----~~~k~~~V~VtESRP~~eG~~-~ak~L~~~gI~~~~I~Ds--------a~~~~ 184 (301)
T COG1184 118 HDGDVILTHSFSKTVLEVLKTAA----DRGKRFKVIVTESRPRGEGRI-MAKELRQSGIPVTVIVDS--------AVGAF 184 (301)
T ss_pred cCCCEEEEecCcHHHHHHHHHhh----hcCCceEEEEEcCCCcchHHH-HHHHHHHcCCceEEEech--------HHHHH
Confidence 34579999998888777777665 4443 666643 4444332 234556668888777622 12222
Q ss_pred hcCCceEEEEecccCccccccc---HHHHHHHHHhcCcEEEEec
Q psy8850 133 ICSDTILVSVMLVNNEIGVIQP---ILEIGELCRSKGVIFHCDA 173 (397)
Q Consensus 133 i~~~~~~v~~~~~~~~tG~~~~---l~~i~~l~~~~gi~livD~ 173 (397)
+.+=.++++=.+.-...|.+.. -..|+..||+.+.++++=+
T Consensus 185 ~~~vd~VivGad~I~~nG~lvnkiGT~~lA~~A~e~~~Pf~v~a 228 (301)
T COG1184 185 MSRVDKVLVGADAILANGALVNKIGTSPLALAARELRVPFYVVA 228 (301)
T ss_pred HHhCCEEEECccceecCCcEEeccchHHHHHHHHHhCCCEEEEe
Confidence 2222233322222233455554 3568888999999887653
No 415
>smart00642 Aamy Alpha-amylase domain.
Probab=66.78 E-value=16 Score=29.75 Aligned_cols=29 Identities=14% Similarity=0.307 Sum_probs=25.2
Q ss_pred cccccccHHHHHHHHHhcCcEEEEecccc
Q psy8850 148 EIGVIQPILEIGELCRSKGVIFHCDAAQA 176 (397)
Q Consensus 148 ~tG~~~~l~~i~~l~~~~gi~livD~a~~ 176 (397)
.-|...+++++++-||++|+.|++|-+..
T Consensus 65 ~~Gt~~d~~~lv~~~h~~Gi~vilD~V~N 93 (166)
T smart00642 65 RFGTMEDFKELVDAAHARGIKVILDVVIN 93 (166)
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 45788889999999999999999997743
No 416
>PF01976 DUF116: Protein of unknown function DUF116; InterPro: IPR002829 These archaeal and bacterial proteins have no known function. Members of this family contain seven conserved cysteines and may also be an integral membrane protein.
Probab=66.23 E-value=54 Score=26.47 Aligned_cols=74 Identities=16% Similarity=0.197 Sum_probs=51.6
Q ss_pred HHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCC----CC
Q psy8850 49 EVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNG----LI 124 (397)
Q Consensus 49 ~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~----~~ 124 (397)
.+++-+|.. +.+.+|+|.|-..+-. . +|+ .++.--++.........+...|+.+..|+.+..| .+
T Consensus 80 ~lae~~g~~---v~i~~Ggt~ar~~ik~-~-----~p~--~iigVAC~~dL~~g~~~~~~~~ip~~gV~l~~~gC~~T~V 148 (158)
T PF01976_consen 80 KLAEKYGYK---VYIATGGTLARKIIKE-Y-----RPK--AIIGVACERDLISGIQDLKPLGIPVQGVLLDRPGCINTDV 148 (158)
T ss_pred HHHHHcCCE---EEEEcChHHHHHHHHH-h-----CCC--EEEEEechHHHHHHHHHHhhcCCCeeEEEeCCCCcCCCcc
Confidence 345666766 8888999876554443 1 333 4555567778888888887778888888887544 57
Q ss_pred CHHHHHHHh
Q psy8850 125 TLSQLEEKI 133 (397)
Q Consensus 125 d~~~l~~~i 133 (397)
|.+.+++.+
T Consensus 149 d~~~v~~~i 157 (158)
T PF01976_consen 149 DWEKVEEAI 157 (158)
T ss_pred cHHHHHHHh
Confidence 888888765
No 417
>TIGR00511 ribulose_e2b2 ribose-1,5-bisphosphate isomerase, e2b2 family. The delineation of this family was based originally, in part, on a discussion and neighbor-joining phylogenetic study by Kyrpides and Woese of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. Recently, Sato, et al. assigned the function ribulose-1,5 bisphosphate isomerase.
Probab=66.14 E-value=1e+02 Score=27.90 Aligned_cols=106 Identities=18% Similarity=0.172 Sum_probs=56.5
Q ss_pred CCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCC--CChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhc
Q psy8850 57 DPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQT--EHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKIC 134 (397)
Q Consensus 57 ~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~--~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~ 134 (397)
....+++|.|.+.....++..+.. .++.-+|++.+. .+.+ ......+...|+.++.++-. .+-..+.
T Consensus 114 ~~g~~ILT~~~S~tv~~~l~~a~~--~~~~f~V~v~EsrP~~~G-~~~a~~L~~~gI~vtlI~Ds--------a~~~~m~ 182 (301)
T TIGR00511 114 RDGDVVMTHCNSEAALSVIKTAFE--QGKDIEVIATETRPRKQG-HITAKELRDYGIPVTLIVDS--------AVRYFMK 182 (301)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHH--cCCcEEEEEecCCCcchH-HHHHHHHHHCCCCEEEEehh--------HHHHHHH
Confidence 344678888766555444443332 134466666553 2233 33344555669998888633 1111222
Q ss_pred CCceEEEE-ecccCccccccc-H--HHHHHHHHhcCcEEEEecc
Q psy8850 135 SDTILVSV-MLVNNEIGVIQP-I--LEIGELCRSKGVIFHCDAA 174 (397)
Q Consensus 135 ~~~~~v~~-~~~~~~tG~~~~-l--~~i~~l~~~~gi~livD~a 174 (397)
+ ...|++ ...-...|.+.. + -.++-+||.+++++++=+-
T Consensus 183 ~-vd~VivGad~v~~nG~v~nkiGT~~lA~~Ak~~~vPv~V~a~ 225 (301)
T TIGR00511 183 E-VDHVVVGADAITANGALINKIGTSQLALAAREARVPFMVAAE 225 (301)
T ss_pred h-CCEEEECccEEecCCCEEEHHhHHHHHHHHHHhCCCEEEEcc
Confidence 2 333333 222233454443 3 4577789999999887543
No 418
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=65.04 E-value=84 Score=26.45 Aligned_cols=125 Identities=12% Similarity=0.121 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEeC--ChhHHHHHHHHHhHhhhc--c--CCCEEEEcCC--CChhhH--HHHHHHhhCC
Q psy8850 41 KAIEKARNEVAQLIYADPREIIWTS--GATESNNLAIKGAAHFYK--K--RGKHIITVQT--EHKSVL--DSIRKLENDG 110 (397)
Q Consensus 41 ~~~~~~~~~la~~~~~~~~~i~~~~--g~t~a~~~~l~~l~~~~~--~--~g~~vl~~~~--~~~s~~--~~~~~~~~~g 110 (397)
+.+......+.+++... ++.+.. =+++.+..++..+..... . .+.+|++... +.+... -....+...|
T Consensus 33 ~~l~p~m~~vG~~w~~~--~i~va~e~~as~~~~~~l~~l~~~~~~~~~~~~~~vl~~~~~gd~H~lG~~~v~~~l~~~G 110 (201)
T cd02070 33 EGLAPGMDIVGDKYEEG--EIFVPELLMAADAMKAGLDLLKPLLGKSKSAKKGKVVIGTVEGDIHDIGKNLVATMLEANG 110 (201)
T ss_pred HHHHHHHHHHHHHHccC--CeeHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCeEEEEecCCccchHHHHHHHHHHHHCC
Confidence 34444555566666543 333322 233445555544432211 1 1334544322 333322 2223344569
Q ss_pred cEEEEeccCCCCCCCHHHHHHHhc-CCceEEEEecccCcccccccHHHHHHHHHhc----CcEEEEec
Q psy8850 111 FRVTYLKPKNNGLITLSQLEEKIC-SDTILVSVMLVNNEIGVIQPILEIGELCRSK----GVIFHCDA 173 (397)
Q Consensus 111 ~~v~~v~~~~~~~~d~~~l~~~i~-~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~----gi~livD~ 173 (397)
.+++.+..+ +..+++.+.+. .++.+|.++...+. ....++++++..++. ++.+++=+
T Consensus 111 ~~vi~lG~~----~p~~~l~~~~~~~~~d~v~lS~~~~~--~~~~~~~~i~~lr~~~~~~~~~i~vGG 172 (201)
T cd02070 111 FEVIDLGRD----VPPEEFVEAVKEHKPDILGLSALMTT--TMGGMKEVIEALKEAGLRDKVKVMVGG 172 (201)
T ss_pred CEEEECCCC----CCHHHHHHHHHHcCCCEEEEeccccc--cHHHHHHHHHHHHHCCCCcCCeEEEEC
Confidence 999877654 46777777665 47888888765332 344577777777765 45666543
No 419
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=64.27 E-value=48 Score=30.01 Aligned_cols=52 Identities=19% Similarity=0.148 Sum_probs=35.8
Q ss_pred CCCHHHHHHHhcC------CceEEEEecccCccccccc-HHHHHHHHHhcCcEEEEeccc
Q psy8850 123 LITLSQLEEKICS------DTILVSVMLVNNEIGVIQP-ILEIGELCRSKGVIFHCDAAQ 175 (397)
Q Consensus 123 ~~d~~~l~~~i~~------~~~~v~~~~~~~~tG~~~~-l~~i~~l~~~~gi~livD~a~ 175 (397)
.++.+++++.++. .-.+|++ +.+=|.|.-.+ +.+|.++||+.|+.+++|...
T Consensus 110 ~is~~~~~~~l~~~~~~l~~~d~Vvl-sGSlP~g~~~d~y~~li~~~~~~g~~vilD~Sg 168 (310)
T COG1105 110 EISEAELEQFLEQLKALLESDDIVVL-SGSLPPGVPPDAYAELIRILRQQGAKVILDTSG 168 (310)
T ss_pred CCCHHHHHHHHHHHHHhcccCCEEEE-eCCCCCCCCHHHHHHHHHHHHhcCCeEEEECCh
Confidence 4566666655432 2234444 35667777655 699999999999999999874
No 420
>COG1954 GlpP Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]
Probab=63.84 E-value=17 Score=29.45 Aligned_cols=50 Identities=26% Similarity=0.390 Sum_probs=41.0
Q ss_pred CHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcC--cEEEEecccccCc
Q psy8850 125 TLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKG--VIFHCDAAQAVGK 179 (397)
Q Consensus 125 d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~g--i~livD~a~~~~~ 179 (397)
|.++++.+++.+..++++= +|.++.++++.+..+++| +.+++|-..+...
T Consensus 12 ~~~~le~~les~~~~vflL-----~~~i~~ik~ivk~lK~~gK~vfiHvDLv~Gl~~ 63 (181)
T COG1954 12 DNKDLEKALESESQYVFLL-----TGHILNIKEIVKKLKNRGKTVFIHVDLVEGLSN 63 (181)
T ss_pred hHHHHHHHhcCCCeEEEEE-----echhhhHHHHHHHHHhCCcEEEEEeHHhcccCC
Confidence 5788999999888887664 578899999999999885 6788888887554
No 421
>TIGR00524 eIF-2B_rel eIF-2B alpha/beta/delta-related uncharacterized proteins. This model, eIF-2B_rel, describes half of a superfamily, where the other half consists of eukaryotic translation initiation factor 2B (eIF-2B) subunits alpha, beta, and delta. It is unclear whether the eIF-2B_rel set is monophyletic, or whether they are all more closely related to each other than to any eIF-2B subunit because the eIF-2B clade is highly derived. Members of this branch of the family are all uncharacterized with respect to function and are found in the Archaea, Bacteria, and Eukarya, although a number are described as putative translation intiation factor components. Proteins found by eIF-2B_rel include at least three clades, including a set of uncharacterized eukaryotic proteins, a set found in some but not all Archaea, and a set universal so far among the Archaea and closely related to several uncharacterized bacterial proteins.
Probab=62.06 E-value=1.2e+02 Score=27.42 Aligned_cols=107 Identities=15% Similarity=0.125 Sum_probs=55.7
Q ss_pred CCcEEEeCChh--------HHHHHHHHHhHhhhccCCCEEEEcC--CCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHH
Q psy8850 58 PREIIWTSGAT--------ESNNLAIKGAAHFYKKRGKHIITVQ--TEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLS 127 (397)
Q Consensus 58 ~~~i~~~~g~t--------~a~~~~l~~l~~~~~~~g~~vl~~~--~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~ 127 (397)
.+++++|.|.+ .....++..... .++..+|++.+ |.+.+.......+...|+.++.++-.
T Consensus 118 ~g~~ILT~~~Sg~lat~~~~tv~~~l~~A~~--~g~~~~V~v~EsrP~~~G~~~~a~~L~~~gI~vtlI~Ds-------- 187 (303)
T TIGR00524 118 DGDTVLTHCNAGALATSDYGTALGVIRSAWE--DGKRIRVIACETRPRNQGSRLTAWELMQDGIDVTLITDS-------- 187 (303)
T ss_pred CCCEEEEecCCccccccCcchHHHHHHHHHH--cCCceEEEECCCCCccchHHHHHHHHHHCCCCEEEEChh--------
Confidence 45678888765 222223332221 13446666653 44444233345556669988888633
Q ss_pred HHHHHhc-CCceEEEE-ecccCccccccc-H--HHHHHHHHhcCcEEEEecc
Q psy8850 128 QLEEKIC-SDTILVSV-MLVNNEIGVIQP-I--LEIGELCRSKGVIFHCDAA 174 (397)
Q Consensus 128 ~l~~~i~-~~~~~v~~-~~~~~~tG~~~~-l--~~i~~l~~~~gi~livD~a 174 (397)
.+-..+. .+...|++ ...-...|.+.. + -.++-+|+.+++++++=+-
T Consensus 188 a~~~~m~~~~vd~VlvGAd~v~~nG~v~nk~GT~~lA~~Ak~~~vPv~V~a~ 239 (303)
T TIGR00524 188 MAAYFMQKGEIDAVIVGADRIARNGDVANKIGTYQLAVLAKEFRIPFFVAAP 239 (303)
T ss_pred HHHHHccccCCCEEEEcccEEecCCCEeEhhhHHHHHHHHHHhCCCEEEecc
Confidence 1222222 13443333 222234454333 3 5677789999999887543
No 422
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=61.93 E-value=54 Score=32.15 Aligned_cols=89 Identities=18% Similarity=0.151 Sum_probs=55.5
Q ss_pred HHHHHhhCC-cEEEEeccCCCCCCCHHHHHHHhcC-CceEEEEecccCcccccccHHHHHHHHHhc--CcEEEEeccccc
Q psy8850 102 SIRKLENDG-FRVTYLKPKNNGLITLSQLEEKICS-DTILVSVMLVNNEIGVIQPILEIGELCRSK--GVIFHCDAAQAV 177 (397)
Q Consensus 102 ~~~~~~~~g-~~v~~v~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~--gi~livD~a~~~ 177 (397)
....+...| .+|..++... ..++.+++.+.+.+ ++.+|.++.. |.......++++.+|+. ++.+|+=+.|..
T Consensus 28 lAa~L~~~G~~~V~iiD~~~-~~~~~~~~~~~l~~~~pdvVgis~~---t~~~~~a~~~~~~~k~~~P~~~iV~GG~h~t 103 (497)
T TIGR02026 28 IGGALLDAGYHDVTFLDAMT-GPLTDEKLVERLRAHCPDLVLITAI---TPAIYIACETLKFARERLPNAIIVLGGIHPT 103 (497)
T ss_pred HHHHHHhcCCcceEEecccc-cCCCHHHHHHHHHhcCcCEEEEecC---cccHHHHHHHHHHHHHHCCCCEEEEcCCCcC
Confidence 333444558 5888887653 33567888777754 7889988753 34444567888888876 999998877753
Q ss_pred CccccccC-cccccEEEe
Q psy8850 178 GKIDINIQ-NYKVDLMSF 194 (397)
Q Consensus 178 ~~~~~~~~-~~~~d~~~~ 194 (397)
.....-+. ...+|+++.
T Consensus 104 ~~~~~~l~~~p~vD~Vv~ 121 (497)
T TIGR02026 104 FMFHQVLTEAPWIDFIVR 121 (497)
T ss_pred cCHHHHHhcCCCccEEEe
Confidence 32111111 124677664
No 423
>PRK08535 translation initiation factor IF-2B subunit delta; Provisional
Probab=61.85 E-value=1.3e+02 Score=27.46 Aligned_cols=106 Identities=18% Similarity=0.155 Sum_probs=57.1
Q ss_pred CCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhh--HHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhc
Q psy8850 57 DPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSV--LDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKIC 134 (397)
Q Consensus 57 ~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~--~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~ 134 (397)
..+.+++|.|.+......+..+.. .+++.+|++.+. .|.. ...+..+...|+.++.++-.. +-.+ +.
T Consensus 119 ~~g~~ILT~~~S~tv~~~l~~A~~--~~k~~~V~v~Es-rP~~~G~~~a~~L~~~GI~vtlI~Dsa-----v~~~---m~ 187 (310)
T PRK08535 119 RDGDVIMTHCNSSAALSVIKTAHE--QGKDIEVIATET-RPRNQGHITAKELAEYGIPVTLIVDSA-----VRYF---MK 187 (310)
T ss_pred CCCCEEEEeCCcHHHHHHHHHHHH--CCCeEEEEEecC-CchhhHHHHHHHHHHCCCCEEEEehhH-----HHHH---HH
Confidence 345678888777555545444332 134466666543 2322 233344556699988887431 1222 22
Q ss_pred CCceEEEE-ecccCccccccc---HHHHHHHHHhcCcEEEEecc
Q psy8850 135 SDTILVSV-MLVNNEIGVIQP---ILEIGELCRSKGVIFHCDAA 174 (397)
Q Consensus 135 ~~~~~v~~-~~~~~~tG~~~~---l~~i~~l~~~~gi~livD~a 174 (397)
+...|++ ...-...|.+.. --.++-+||.|++++++=+.
T Consensus 188 -~vd~VivGAd~v~~nG~v~nkiGT~~~A~~Ak~~~vPv~V~a~ 230 (310)
T PRK08535 188 -DVDKVVVGADAITANGAVINKIGTSQIALAAHEARVPFMVAAE 230 (310)
T ss_pred -hCCEEEECccEEecCCCEEeHHhHHHHHHHHHHhCCCEEEecc
Confidence 2433333 233334554444 24577789999998887543
No 424
>TIGR01305 GMP_reduct_1 guanosine monophosphate reductase, eukaryotic. A deep split separates two families of GMP reductase. This family includes both eukaryotic and some proteobacterial sequences, while the other family contains other bacterial sequences.
Probab=61.37 E-value=70 Score=29.34 Aligned_cols=133 Identities=13% Similarity=0.071 Sum_probs=69.9
Q ss_pred cEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcCCceE
Q psy8850 60 EIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTIL 139 (397)
Q Consensus 60 ~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~ 139 (397)
.+.+..|..+.-.--+..+... .++-.+++-+..|.-....++.++...-.....++=..+-.+.++.++++......
T Consensus 97 ~~~vsvG~~~~d~er~~~L~~a--~~~~d~iviD~AhGhs~~~i~~ik~ir~~~p~~~viaGNV~T~e~a~~Li~aGAD~ 174 (343)
T TIGR01305 97 NVAVSSGSSDNDLEKMTSILEA--VPQLKFICLDVANGYSEHFVEFVKLVREAFPEHTIMAGNVVTGEMVEELILSGADI 174 (343)
T ss_pred eEEEEeccCHHHHHHHHHHHhc--CCCCCEEEEECCCCcHHHHHHHHHHHHhhCCCCeEEEecccCHHHHHHHHHcCCCE
Confidence 3455555555444444545521 23445566667777666655554321100000011122356889999998877777
Q ss_pred EEEe--cccCc-----cccccc----HHHHHHHHHhcCcEEEEecccc-cCccccccCcccccEEEec
Q psy8850 140 VSVM--LVNNE-----IGVIQP----ILEIGELCRSKGVIFHCDAAQA-VGKIDINIQNYKVDLMSFS 195 (397)
Q Consensus 140 v~~~--~~~~~-----tG~~~~----l~~i~~l~~~~gi~livD~a~~-~~~~~~~~~~~~~d~~~~s 195 (397)
|.+. ..++= +|.-.| +.++++.+++++++||.|.--- .|.+--.+ ..++|.+...
T Consensus 175 ikVgiGpGSicttR~~~Gvg~pqltAv~~~a~aa~~~~v~VIaDGGIr~~gDI~KAL-A~GAd~VMlG 241 (343)
T TIGR01305 175 VKVGIGPGSVCTTRTKTGVGYPQLSAVIECADAAHGLKGHIISDGGCTCPGDVAKAF-GAGADFVMLG 241 (343)
T ss_pred EEEcccCCCcccCceeCCCCcCHHHHHHHHHHHhccCCCeEEEcCCcCchhHHHHHH-HcCCCEEEEC
Confidence 6555 11121 344334 4566777778899999996433 23322222 3477777655
No 425
>PF13407 Peripla_BP_4: Periplasmic binding protein domain; PDB: 3BRS_B 3GBP_A 3GA5_A 1GCG_A 1GCA_A 3H75_A 3D02_A 3L49_B 3EJW_B 3T95_A ....
Probab=61.14 E-value=38 Score=29.37 Aligned_cols=57 Identities=18% Similarity=0.258 Sum_probs=38.3
Q ss_pred CcEEEEe-ccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEE
Q psy8850 110 GFRVTYL-KPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHC 171 (397)
Q Consensus 110 g~~v~~v-~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~liv 171 (397)
|..+..+ +...+..--.+.+++++.+++.+|++...... ....+.+-|++.|++|+.
T Consensus 28 g~~~~~~~~~~~d~~~q~~~i~~~i~~~~d~Iiv~~~~~~-----~~~~~l~~~~~~gIpvv~ 85 (257)
T PF13407_consen 28 GYEVEIVFDAQNDPEEQIEQIEQAISQGVDGIIVSPVDPD-----SLAPFLEKAKAAGIPVVT 85 (257)
T ss_dssp TCEEEEEEESTTTHHHHHHHHHHHHHTTESEEEEESSSTT-----TTHHHHHHHHHTTSEEEE
T ss_pred CCEEEEeCCCCCCHHHHHHHHHHHHHhcCCEEEecCCCHH-----HHHHHHHHHhhcCceEEE
Confidence 8888886 44433223356677778889999988755322 234556668899998876
No 426
>COG1058 CinA Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA [General function prediction only]
Probab=60.61 E-value=26 Score=30.68 Aligned_cols=83 Identities=11% Similarity=0.090 Sum_probs=53.2
Q ss_pred CCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhc---CCceEEEEecccCcccccccHHHHHHHH
Q psy8850 86 GKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKIC---SDTILVSVMLVNNEIGVIQPILEIGELC 162 (397)
Q Consensus 86 g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~---~~~~~v~~~~~~~~tG~~~~l~~i~~l~ 162 (397)
|+++|.............+.+...|+.+..+-+-.| ++++|.+.++ ++..+|+++..- |-..|--....+|
T Consensus 10 G~ElL~G~ivdtNa~~la~~L~~~G~~v~~~~~VgD---~~~~I~~~l~~a~~r~D~vI~tGGL---GPT~DDiT~e~vA 83 (255)
T COG1058 10 GDELLSGRIVDTNAAFLADELTELGVDLARITTVGD---NPDRIVEALREASERADVVITTGGL---GPTHDDLTAEAVA 83 (255)
T ss_pred ccceecCceecchHHHHHHHHHhcCceEEEEEecCC---CHHHHHHHHHHHHhCCCEEEECCCc---CCCccHhHHHHHH
Confidence 577776665444555555666677998887766433 4666666554 357888887763 4445544445557
Q ss_pred HhcCcEEEEecc
Q psy8850 163 RSKGVIFHCDAA 174 (397)
Q Consensus 163 ~~~gi~livD~a 174 (397)
+..|..++.|+-
T Consensus 84 ka~g~~lv~~~~ 95 (255)
T COG1058 84 KALGRPLVLDEE 95 (255)
T ss_pred HHhCCCcccCHH
Confidence 777888888854
No 427
>KOG1467|consensus
Probab=60.32 E-value=1.7e+02 Score=28.30 Aligned_cols=108 Identities=12% Similarity=0.083 Sum_probs=65.6
Q ss_pred CCCcEEEeCChhHHHHHHHHHhHhhhccCCC-EEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcC
Q psy8850 57 DPREIIWTSGATESNNLAIKGAAHFYKKRGK-HIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS 135 (397)
Q Consensus 57 ~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~-~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~ 135 (397)
...++++|.|.+..++.++.-... .++.- .|+|..-...--...++.+...|++..++-++. +..+ ..+
T Consensus 358 ~dgdviltyg~s~vV~~ill~A~~--~~k~frVvVVDSRP~~EG~~~lr~Lv~~GinctYv~I~a-----~syi---m~e 427 (556)
T KOG1467|consen 358 QDGDVLLTYGSSSVVNMILLEAKE--LGKKFRVVVVDSRPNLEGRKLLRRLVDRGINCTYVLINA-----ASYI---MLE 427 (556)
T ss_pred hcCCEEEEecchHHHHHHHHHHHH--hCcceEEEEEeCCCCcchHHHHHHHHHcCCCeEEEEehh-----HHHH---HHh
Confidence 445688888888887777665321 13333 334443322222344455555688888876652 1222 123
Q ss_pred CceEEEEecccCcccccccH---HHHHHHHHhcCcEEEEecc
Q psy8850 136 DTILVSVMLVNNEIGVIQPI---LEIGELCRSKGVIFHCDAA 174 (397)
Q Consensus 136 ~~~~v~~~~~~~~tG~~~~l---~~i~~l~~~~gi~livD~a 174 (397)
-++++.=.|.-...|.++.- ..++=+++.||++|++=+-
T Consensus 428 vtkvfLGahailsNG~vysR~GTa~valvAna~nVPVlVCCE 469 (556)
T KOG1467|consen 428 VTKVFLGAHAILSNGAVYSRVGTACVALVANAFNVPVLVCCE 469 (556)
T ss_pred cceeeechhhhhcCcchhhhcchHHHHHHhcccCCCEEEEec
Confidence 46777766766778998883 4566678889999888654
No 428
>PRK08335 translation initiation factor IF-2B subunit alpha; Validated
Probab=60.06 E-value=1.3e+02 Score=26.90 Aligned_cols=104 Identities=17% Similarity=0.196 Sum_probs=54.2
Q ss_pred CCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcC--CCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhc
Q psy8850 57 DPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQ--TEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKIC 134 (397)
Q Consensus 57 ~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~--~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~ 134 (397)
+++..++|.|.+.....++..... .++..+|++.+ |.+.+..- ...+...|+.++.++-.. ...+.+
T Consensus 108 ~~g~~ILTh~~S~tv~~~l~~A~~--~gk~~~V~v~EsrP~~qG~~l-a~eL~~~GI~vtlI~Dsa-----~~~~m~--- 176 (275)
T PRK08335 108 DDGDVIITHSFSSAVLEILKTAKR--KGKRFKVILTESAPDYEGLAL-ANELEFLGIEFEVITDAQ-----LGLFAK--- 176 (275)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHH--cCCceEEEEecCCCchhHHHH-HHHHHHCCCCEEEEeccH-----HHHHHH---
Confidence 345677777766443334433331 13345677665 44444333 444555698888887431 222222
Q ss_pred CCceEEEE-ecccCcccccc-cH--HHHHHHHHhcCcEEEEe
Q psy8850 135 SDTILVSV-MLVNNEIGVIQ-PI--LEIGELCRSKGVIFHCD 172 (397)
Q Consensus 135 ~~~~~v~~-~~~~~~tG~~~-~l--~~i~~l~~~~gi~livD 172 (397)
+...|++ ...-...|.+. .+ -.++-+||.||+++++=
T Consensus 177 -~vd~VivGAD~I~~nG~v~NKiGT~~lA~~Ak~~~vPfyV~ 217 (275)
T PRK08335 177 -EATLALVGADNVTRDGYVVNKAGTYLLALACHDNGVPFYVA 217 (275)
T ss_pred -hCCEEEECccEEecCCCEeehhhHHHHHHHHHHcCCCEEEE
Confidence 2333333 22223334333 33 45777899999999883
No 429
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=58.88 E-value=74 Score=26.46 Aligned_cols=102 Identities=13% Similarity=0.099 Sum_probs=41.4
Q ss_pred cEEEeCChhHHHHHHHHHhHhhhc--cCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcC-C
Q psy8850 60 EIIWTSGATESNNLAIKGAAHFYK--KRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS-D 136 (397)
Q Consensus 60 ~i~~~~g~t~a~~~~l~~l~~~~~--~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~-~ 136 (397)
..+...++|.+-..++..+..... .|+-.|+++..+-.+...+...+.. ...+.+.|.| .+..+++.++. +
T Consensus 22 ~~iWiHa~SvGE~~a~~~Li~~l~~~~p~~~illT~~T~tg~~~~~~~~~~-~v~~~~~P~D-----~~~~~~rfl~~~~ 95 (186)
T PF04413_consen 22 PLIWIHAASVGEVNAARPLIKRLRKQRPDLRILLTTTTPTGREMARKLLPD-RVDVQYLPLD-----FPWAVRRFLDHWR 95 (186)
T ss_dssp T-EEEE-SSHHHHHHHHHHHHHHTT---TS-EEEEES-CCHHHHHHGG-GG-G-SEEE---S-----SHHHHHHHHHHH-
T ss_pred CcEEEEECCHHHHHHHHHHHHHHHHhCCCCeEEEEecCCchHHHHHHhCCC-CeEEEEeCcc-----CHHHHHHHHHHhC
Confidence 344444555443344444443332 2467787776655555444333322 5567778877 35556665554 5
Q ss_pred ceEEEEecccCcccccccHHHHHHHHHhcCcEEE-Eecc
Q psy8850 137 TILVSVMLVNNEIGVIQPILEIGELCRSKGVIFH-CDAA 174 (397)
Q Consensus 137 ~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~li-vD~a 174 (397)
|+++++... .=...+...|++.|++++ +++-
T Consensus 96 P~~~i~~Et-------ElWPnll~~a~~~~ip~~LvNar 127 (186)
T PF04413_consen 96 PDLLIWVET-------ELWPNLLREAKRRGIPVVLVNAR 127 (186)
T ss_dssp -SEEEEES-----------HHHHHH-----S-EEEEEE-
T ss_pred CCEEEEEcc-------ccCHHHHHHHhhcCCCEEEEeee
Confidence 666655432 123467777999998654 4443
No 430
>PRK05096 guanosine 5'-monophosphate oxidoreductase; Provisional
Probab=57.84 E-value=77 Score=29.09 Aligned_cols=132 Identities=14% Similarity=0.134 Sum_probs=67.9
Q ss_pred cEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcCCceE
Q psy8850 60 EIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTIL 139 (397)
Q Consensus 60 ~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~ 139 (397)
.+.+..|..+.-.--+..+... .++-.+++-+..|.-....+...+...-..-.+++=..+-.+.+..++++.....+
T Consensus 98 ~~~vavG~~~~d~er~~~L~~~--~~g~D~iviD~AhGhs~~~i~~ik~ik~~~P~~~vIaGNV~T~e~a~~Li~aGAD~ 175 (346)
T PRK05096 98 HVMVSTGTSDADFEKTKQILAL--SPALNFICIDVANGYSEHFVQFVAKAREAWPDKTICAGNVVTGEMVEELILSGADI 175 (346)
T ss_pred eEEEEecCCHHHHHHHHHHHhc--CCCCCEEEEECCCCcHHHHHHHHHHHHHhCCCCcEEEecccCHHHHHHHHHcCCCE
Confidence 4555555555433344445421 13555566667777666666654321111000111122345778888888765444
Q ss_pred EEE-------ecccCccccccc----HHHHHHHHHhcCcEEEEeccc-ccCccccccCcccccEEEe
Q psy8850 140 VSV-------MLVNNEIGVIQP----ILEIGELCRSKGVIFHCDAAQ-AVGKIDINIQNYKVDLMSF 194 (397)
Q Consensus 140 v~~-------~~~~~~tG~~~~----l~~i~~l~~~~gi~livD~a~-~~~~~~~~~~~~~~d~~~~ 194 (397)
+-+ +..--.+|.=.| +.+.++.++++|+++|.|.-- ..|...-.+. .++|.+..
T Consensus 176 vKVGIGpGSiCtTr~vtGvG~PQltAV~~~a~~a~~~gvpiIADGGi~~sGDI~KAla-aGAd~VMl 241 (346)
T PRK05096 176 VKVGIGPGSVCTTRVKTGVGYPQLSAVIECADAAHGLGGQIVSDGGCTVPGDVAKAFG-GGADFVML 241 (346)
T ss_pred EEEcccCCccccCccccccChhHHHHHHHHHHHHHHcCCCEEecCCcccccHHHHHHH-cCCCEEEe
Confidence 421 112223455455 567788889999999999642 2333322222 26666653
No 431
>TIGR02313 HpaI-NOT-DapA 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase. This model represents a subset of the DapA (dihydrodipicolinate synthase) family which has apparently evolved a separate function. The product of DapA, dihydrodipicolinate, results from the non-enzymatic cyclization and dehydration of 6-amino-2,4-dihydroxyhept-2-ene-1,7-dioic acid, which is different from the substrate of this reaction only in the presence of the amino group. In the absence of this amino group, and running the reaction in the opposite direction, the reaction corresponds to the HpaI aldolase component of the 4-hydroxyphenylacetic acid catabolism pathway (see TIGR02311). At present, this variant of DapA is found only in Oceanobacillus iheyensis HTE831 and Thermus thermophilus HB27. In both of these cases, one or more other DapA genes can be found and the one identified by this model is part of an operon for 4-hydroxyphenylacetic acid catabolism.
Probab=57.80 E-value=1.5e+02 Score=26.81 Aligned_cols=37 Identities=3% Similarity=-0.053 Sum_probs=25.0
Q ss_pred ceEEEEecccCcccccccHHHHHHHHHhc-CcEEEEecc
Q psy8850 137 TILVSVMLVNNEIGVIQPILEIGELCRSK-GVIFHCDAA 174 (397)
Q Consensus 137 ~~~v~~~~~~~~tG~~~~l~~i~~l~~~~-gi~livD~a 174 (397)
..+++...|. .||..++.+.+.++++++ ++.-|=|..
T Consensus 128 lpv~iYn~P~-~tg~~l~~~~l~~L~~~~pnv~giK~ss 165 (294)
T TIGR02313 128 FPIIIYNIPG-RAAQEIAPKTMARLRKDCPNIVGAKESN 165 (294)
T ss_pred CCEEEEeCch-hcCcCCCHHHHHHHHhhCCCEEEEEeCC
Confidence 3444444332 378999999999999764 666666754
No 432
>PRK10886 DnaA initiator-associating protein DiaA; Provisional
Probab=57.79 E-value=94 Score=26.12 Aligned_cols=45 Identities=11% Similarity=0.101 Sum_probs=31.5
Q ss_pred HHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccc
Q psy8850 128 QLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQA 176 (397)
Q Consensus 128 ~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~ 176 (397)
.++...+++..++.+++ +|....+.++++.+|++|+.+|.=..+.
T Consensus 102 ql~~~~~~gDvli~iS~----SG~s~~v~~a~~~Ak~~G~~vI~IT~~~ 146 (196)
T PRK10886 102 QVRALGHAGDVLLAIST----RGNSRDIVKAVEAAVTRDMTIVALTGYD 146 (196)
T ss_pred HHHHcCCCCCEEEEEeC----CCCCHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 34444455555666654 5777789999999999999888755443
No 433
>PF04309 G3P_antiterm: Glycerol-3-phosphate responsive antiterminator; InterPro: IPR006699 Glycerol enters bacterial cells via facilitated diffusion, an energy-independent transport process catalysed by the glycerol transport facilitator GlpF, an integral membrane protein of the aquaporin family. Intracellular glycerol is usually converted to glycerol-3-P in an ATP-requiring phosphorylation reaction catalysed by glycerol kinase (GlpK). Glycerol-3-P, the inducer of the glpFK operon, is not a substrate for GlpF and hence remains entrapped in the cell where it is metabolized further. In some bacterial species, for example Bacillus firmus, glycerol-3-P activates the antiterminator GlpP []. In B. subtilis, glpF and glpK are organised in an operon followed by the glycerol-3-P dehydrogenase-encoding glpD gene and preceded by glpP coding for an antiterminator regulating the expression of glpFK, glpD and glpTQ. Their induction requires the inducer glycerol-3-P, which activates the antiterminator GlpP by allowing it to bind to the leader region of glpD and presumably also of glpFK and glpTQ mRNAs.; GO: 0006355 regulation of transcription, DNA-dependent, 0009607 response to biotic stimulus; PDB: 1VKF_A 3KTS_G.
Probab=57.76 E-value=4.5 Score=33.18 Aligned_cols=51 Identities=24% Similarity=0.328 Sum_probs=37.6
Q ss_pred CHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcC--cEEEEecccccCcc
Q psy8850 125 TLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKG--VIFHCDAAQAVGKI 180 (397)
Q Consensus 125 d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~g--i~livD~a~~~~~~ 180 (397)
+.++++.+++.+...+++- +|.+..++.+++.+|++| +.|++|-..+.+.-
T Consensus 8 ~~~~l~~al~s~~~~vfLl-----~g~I~~l~~~v~~~~~~gK~vfVHiDli~Gl~~D 60 (175)
T PF04309_consen 8 DEEDLEKALESDVEVVFLL-----TGDIGNLKDIVKRLKAAGKKVFVHIDLIEGLSRD 60 (175)
T ss_dssp CCCCCCCCCCSSSSEEEE------SEECCCHHHHHHHHHHTT-EEEEECCGEETB-SS
T ss_pred CHHHHHHHHcCCCCEEEEE-----cCcHHHHHHHHHHHHHcCCEEEEEehhcCCCCCC
Confidence 3456677777777777775 478899999999999987 56778877776553
No 434
>TIGR03600 phage_DnaB phage replicative helicase, DnaB family, HK022 subfamily. Members of this family are phage (or prophage-region) homologs of the bacterial homohexameric replicative helicase DnaB. Some phage may rely on host DnaB, while others encode their own verions. This model describes the largest phage-specific clade among the close homologs of DnaB, but there are, or course, other DnaB homologs from phage that fall outside the scope of this model.
Probab=57.14 E-value=91 Score=29.78 Aligned_cols=16 Identities=19% Similarity=0.156 Sum_probs=7.6
Q ss_pred CCEEEEcCCCChhhHH
Q psy8850 86 GKHIITVQTEHKSVLD 101 (397)
Q Consensus 86 g~~vl~~~~~~~s~~~ 101 (397)
|..|++...+.+...-
T Consensus 223 g~~v~~fSlEm~~~~l 238 (421)
T TIGR03600 223 GKPVLFFSLEMSAEQL 238 (421)
T ss_pred CCcEEEEECCCCHHHH
Confidence 4455554555544433
No 435
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=57.09 E-value=9.6 Score=38.00 Aligned_cols=38 Identities=8% Similarity=0.010 Sum_probs=32.3
Q ss_pred EEEEecccCcccccccHHHHHHHHHhcCcEEEEecccc
Q psy8850 139 LVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQA 176 (397)
Q Consensus 139 ~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~ 176 (397)
.+..=.|++.-|...+++.+++-||++||-||+|-+++
T Consensus 200 ~~g~yAp~sryGtPedfk~fVD~aH~~GIgViLD~V~~ 237 (628)
T COG0296 200 GTGYYAPTSRYGTPEDFKALVDAAHQAGIGVILDWVPN 237 (628)
T ss_pred cceeccccccCCCHHHHHHHHHHHHHcCCEEEEEecCC
Confidence 44444477788999999999999999999999999976
No 436
>KOG2142|consensus
Probab=56.95 E-value=7.3 Score=38.35 Aligned_cols=166 Identities=13% Similarity=0.118 Sum_probs=100.1
Q ss_pred HHHHHHHHhCCCCCc--EEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChh--hHHHHHHHhhCCcEEEEeccC-C
Q psy8850 46 ARNEVAQLIYADPRE--IIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKS--VLDSIRKLENDGFRVTYLKPK-N 120 (397)
Q Consensus 46 ~~~~la~~~~~~~~~--i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s--~~~~~~~~~~~g~~v~~v~~~-~ 120 (397)
++..+-.+++.+.++ .++|.+-..|..+.+......+ . ..+..-..|++ .....+.+...|......... +
T Consensus 181 ik~ri~d~L~ipe~~y~lldtaSrvSaf~Ldaesy~f~~-~---~~lltiFgyetgAvlv~~r~A~~~Ggkt~sa~f~wp 256 (728)
T KOG2142|consen 181 IKLRIMDRLNIPESEYVLLDTASRVSAFPLDAESYPFDF-N---PKLLTIFGYETGAVLVMNRSAELKGGKTASAEFSWP 256 (728)
T ss_pred eeeeeecccccCCceEEEEEeecccccccchHhhCCCcc-c---chheeecCCCchhhHHHhhhhHhhcCccceeecccc
Confidence 556666777776555 6667777777777777654321 1 22555556666 222222222335555444333 3
Q ss_pred CCCCCHHHHHHHhcCCce--------EEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCc-c-ccccCccccc
Q psy8850 121 NGLITLSQLEEKICSDTI--------LVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGK-I-DINIQNYKVD 190 (397)
Q Consensus 121 ~~~~d~~~l~~~i~~~~~--------~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~-~-~~~~~~~~~d 190 (397)
+..+.-+++++.+++.+. ...++..+--||..++++.+ .++.+.+..+..|.-+-... + .+....+.+|
T Consensus 257 ~~~l~s~~lkkr~e~gk~~~kd~a~gl~vFp~~sRvtG~~ysy~wm-t~al~~~whvlLda~~lG~kdmd~yglS~f~Pd 335 (728)
T KOG2142|consen 257 MLYLLSEKLKKRFEDGKLRFKDIAQGLFVFPTQSRVTGGMYSYSWM-TLALANNWHVLLDALALGPKDMDSYGLSLFQPD 335 (728)
T ss_pred hHHHHHHHHHHHHhhccccccchhhheeccchHhhhcccchhHHHH-HHHHhhhHHHHHhhhccCcchHhhhhhhccCcc
Confidence 344556678877765331 44677777778999998876 35777788888886654211 1 2233444689
Q ss_pred EEEeccccccC---CCCceEEEEecCCCC
Q psy8850 191 LMSFSAHKIYG---PKGIGALYIRRNPRT 216 (397)
Q Consensus 191 ~~~~s~~K~~g---~~g~g~~~~~~~~~~ 216 (397)
+...|+.+.+| |.|.|++.+.+..+.
T Consensus 336 fqg~sf~fv~g~d~psgfGcl~VkKs~i~ 364 (728)
T KOG2142|consen 336 FQGPSFYFVFGRDDPSGFGCLEVKKSAIS 364 (728)
T ss_pred ceeeeEEEEeccCCCCceeeeeeehhhhh
Confidence 99999999555 556788888765533
No 437
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=56.79 E-value=1.2e+02 Score=25.48 Aligned_cols=62 Identities=18% Similarity=0.319 Sum_probs=41.1
Q ss_pred HhhCCcEEEEeccCCCCCCCHHHHHHHhc-CCceEEEEecccCcccccccHHHHHHHHHhcC----cEEEEec
Q psy8850 106 LENDGFRVTYLKPKNNGLITLSQLEEKIC-SDTILVSVMLVNNEIGVIQPILEIGELCRSKG----VIFHCDA 173 (397)
Q Consensus 106 ~~~~g~~v~~v~~~~~~~~d~~~l~~~i~-~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~g----i~livD~ 173 (397)
+...|++++.+..+ +.++++.+.+. .++.+|.++...+. ....++++.+.+++.+ +.+++=+
T Consensus 108 l~~~G~~vi~LG~~----vp~e~~v~~~~~~~pd~v~lS~~~~~--~~~~~~~~i~~l~~~~~~~~v~i~vGG 174 (197)
T TIGR02370 108 LRANGFDVIDLGRD----VPIDTVVEKVKKEKPLMLTGSALMTT--TMYGQKDINDKLKEEGYRDSVKFMVGG 174 (197)
T ss_pred HHhCCcEEEECCCC----CCHHHHHHHHHHcCCCEEEEcccccc--CHHHHHHHHHHHHHcCCCCCCEEEEEC
Confidence 34459999988766 56777777665 47888888764333 2334677777777763 5566544
No 438
>cd05126 Mth938 Mth938 domain. Mth938 is a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. This protein crystallizes as a dimer, although it is monomeric in solution, with one disulfide bond in each monomer. The function of the protein has not been determined.
Probab=56.68 E-value=36 Score=25.86 Aligned_cols=51 Identities=16% Similarity=0.098 Sum_probs=37.7
Q ss_pred CCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEeccc
Q psy8850 123 LITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQ 175 (397)
Q Consensus 123 ~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~ 175 (397)
.+++++++..+..++.+|++-.. ..|...+-.++.+.++++|+-+.+..+.
T Consensus 45 ~l~~~~l~~ll~~~peivliGTG--~~~~~~~~~~~~~~l~~~Gi~ve~m~T~ 95 (117)
T cd05126 45 GLQPEELEELLEEGVEVIVIGTG--QSGALKVPPETVEKLEKRGVEVLVLPTE 95 (117)
T ss_pred cCCHHHHHHHHhcCCCEEEEcCC--CCccccCCHHHHHHHHhcCCEEEEcChH
Confidence 47899999999988998888533 3444445677777899999988775543
No 439
>TIGR00649 MG423 conserved hypothetical protein. Contains an ATP-binding domain at the N-terminal end of the protein. Possibly part of a superfamily of beta-lactmases
Probab=56.31 E-value=1.5e+02 Score=28.30 Aligned_cols=77 Identities=10% Similarity=0.107 Sum_probs=49.3
Q ss_pred CCCEEEEcCCCChhhH-HHHH-----HHhhCCcEEEEeccCCCCCCCHHHHHHHhcC-CceEEEEecccCcccccccHHH
Q psy8850 85 RGKHIITVQTEHKSVL-DSIR-----KLENDGFRVTYLKPKNNGLITLSQLEEKICS-DTILVSVMLVNNEIGVIQPILE 157 (397)
Q Consensus 85 ~g~~vl~~~~~~~s~~-~~~~-----~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~~~tG~~~~l~~ 157 (397)
++|.|+++.+.-+++. .... .+.+.|.++.. ...-.|+.+-++|...++- +|+.++..|. ....+..
T Consensus 318 ~~d~vi~s~~~~~G~~~~~~~~~~~~~~~~~~~~~~~-~~h~SgHa~~~dl~~~i~~~~Pk~~ipvHg-----e~~~~~~ 391 (422)
T TIGR00649 318 KGDTVVFSAPPIPGNENIAVSILLDIRLNEVGARVIK-RIHVSGHASQEDHKLLLRLLKPKYIIPVHG-----EYRMLIN 391 (422)
T ss_pred CCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCEEEe-ceEecCCCCHHHHHHHHHHhCCCEEEecCC-----cHHHHHH
Confidence 5688988887777766 2222 23345777653 2344577788888887764 6887777664 3334566
Q ss_pred HHHHHHhcCc
Q psy8850 158 IGELCRSKGV 167 (397)
Q Consensus 158 i~~l~~~~gi 167 (397)
.++++++.|+
T Consensus 392 ~~~~a~~~g~ 401 (422)
T TIGR00649 392 HTKLAEEEGY 401 (422)
T ss_pred HHHHHHHcCC
Confidence 6777777665
No 440
>COG1908 FrhD Coenzyme F420-reducing hydrogenase, delta subunit [Energy production and conversion]
Probab=55.60 E-value=41 Score=25.48 Aligned_cols=44 Identities=20% Similarity=0.266 Sum_probs=33.5
Q ss_pred hHHHhhCCCccccCceEEEeeCCCCCHHHHHHHHHHHHHHHHHHHhcCccc
Q psy8850 330 YVLRALGCNDELAHSSIRFTIGRFTTEKEIDFTIKLLKMKVKKLRELSPLW 380 (397)
Q Consensus 330 ~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~ 380 (397)
..++.+|+.+ ..+|.-. ++..+-|++.+.+++++++++++.|.-
T Consensus 85 e~l~elgie~----eRv~~~w---iSa~E~ekf~e~~~efv~~i~~lGpnp 128 (132)
T COG1908 85 ELLKELGIEP----ERVRVLW---ISAAEGEKFAETINEFVERIKELGPNP 128 (132)
T ss_pred HHHHHhCCCc----ceEEEEE---EehhhHHHHHHHHHHHHHHHHHhCCCc
Confidence 3456666665 4455433 578999999999999999999999864
No 441
>TIGR00608 radc DNA repair protein radc. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=55.60 E-value=63 Score=27.69 Aligned_cols=42 Identities=10% Similarity=0.090 Sum_probs=29.9
Q ss_pred HHHHHHhcCCceEEEEecccCccccccc-------HHHHHHHHHhcCcEE
Q psy8850 127 SQLEEKICSDTILVSVMLVNNEIGVIQP-------ILEIGELCRSKGVIF 169 (397)
Q Consensus 127 ~~l~~~i~~~~~~v~~~~~~~~tG~~~~-------l~~i~~l~~~~gi~l 169 (397)
+-++.++..+...|++.|.| |.|...| -+++.+.|+--||.+
T Consensus 150 eI~~~Al~~~A~~vIlaHNH-PSG~~~PS~~Di~~T~~l~~a~~~lgI~l 198 (218)
T TIGR00608 150 EIFKEALKLSASALILAHNH-PSGEPSPSQEDILITERLRKAAELLGIEL 198 (218)
T ss_pred HHHHHHHHhhCCeEEEEeec-CCCCCCCCHHHHHHHHHHHHHHHhCCCEE
Confidence 34556777787788887665 7898877 246777777777765
No 442
>PF07085 DRTGG: DRTGG domain; InterPro: IPR010766 This presumed domain is about 120 amino acids in length. It is found associated with CBS domains IPR000644 from INTERPRO, as well as the CbiA domain IPR002586 from INTERPRO. The function of this domain is unknown. It is named the DRTGG domain after some of the most conserved residues. This domain may be very distantly related to a pair of CBS domains. There are no significant sequence similarities, but its length and association with CBS domains supports this idea. ; PDB: 3L31_B 3L2B_A 2IOJ_A.
Probab=55.45 E-value=81 Score=23.16 Aligned_cols=50 Identities=14% Similarity=0.119 Sum_probs=32.9
Q ss_pred EEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEe
Q psy8850 112 RVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCD 172 (397)
Q Consensus 112 ~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD 172 (397)
.+.-++-+ +.+.+..++....++++++ |...|-+++.++|++++++++.=
T Consensus 42 ~lvIt~gd-----R~di~~~a~~~~i~~iIlt------g~~~~~~~v~~la~~~~i~vi~t 91 (105)
T PF07085_consen 42 DLVITPGD-----REDIQLAAIEAGIACIILT------GGLEPSEEVLELAKELGIPVIST 91 (105)
T ss_dssp EEEEEETT------HHHHHHHCCTTECEEEEE------TT----HHHHHHHHHHT-EEEE-
T ss_pred eEEEEeCC-----cHHHHHHHHHhCCCEEEEe------CCCCCCHHHHHHHHHCCCEEEEE
Confidence 44545444 5677777888888888885 55567889999999999988763
No 443
>PF00926 DHBP_synthase: 3,4-dihydroxy-2-butanone 4-phosphate synthase; InterPro: IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase (4.1.99.12 from EC) (DHBP synthase) (RibB) catalyses the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate, the latter serving as the biosynthetic precursor for the xylene ring of riboflavin []. In Photobacterium leiognathi, the riboflavin synthesis genes ribB (DHBP synthase), ribE (riboflavin synthase), ribH (lumazone synthase) and ribA (GTP cyclohydrolase II) all reside in the lux operon []. RibB is sometimes found as a bifunctional enzyme with GTP cyclohydrolase II that catalyses the first committed step in the biosynthesis of riboflavin (IPR000926 from INTERPRO). No sequences with significant homology to DHBP synthase are found in the metazoa.; GO: 0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity, 0009231 riboflavin biosynthetic process; PDB: 1K4O_A 1K4L_A 1K4P_A 1K49_A 1K4I_A 1TKU_A 1TKS_B 2RIS_A 2RIU_A 3MIO_A ....
Probab=54.69 E-value=30 Score=28.96 Aligned_cols=36 Identities=14% Similarity=0.186 Sum_probs=27.5
Q ss_pred CCceEEEEecccCcccccccHHHHHHHHHhcCcEEEE
Q psy8850 135 SDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHC 171 (397)
Q Consensus 135 ~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~liv 171 (397)
-.+..++.+ .-+..|...+.+++.++|++||++++.
T Consensus 151 l~p~avi~e-il~~dG~~~~~~~~~~fA~~~~l~~vs 186 (194)
T PF00926_consen 151 LSPVAVICE-ILDDDGDMARRDELEEFAKKHGLPIVS 186 (194)
T ss_dssp S-SBEEEEE-BBETTSSBHCHHHHHHHHHHTT-EEEE
T ss_pred CCCcEEEEE-EeCCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 356666665 456799999999999999999998863
No 444
>PRK00024 hypothetical protein; Reviewed
Probab=54.48 E-value=57 Score=28.11 Aligned_cols=43 Identities=9% Similarity=0.078 Sum_probs=30.2
Q ss_pred HHHHHHhcCCceEEEEecccCccccccc-------HHHHHHHHHhcCcEEE
Q psy8850 127 SQLEEKICSDTILVSVMLVNNEIGVIQP-------ILEIGELCRSKGVIFH 170 (397)
Q Consensus 127 ~~l~~~i~~~~~~v~~~~~~~~tG~~~~-------l~~i~~l~~~~gi~li 170 (397)
+-++.++..+...|++.|.| |.|...| -++|.+.|+--||.++
T Consensus 156 ei~~~Al~~~A~~iIl~HNH-PSG~~~PS~~D~~~T~~l~~a~~~l~I~ll 205 (224)
T PRK00024 156 EIVKRALKLNAAALILAHNH-PSGDPEPSQADILITKRLKEAGELLGIRLL 205 (224)
T ss_pred HHHHHHHHhhccceEEEecC-CCCCCCCCHHHHHHHHHHHHHHHhCCCEEe
Confidence 34556777788888888764 8898877 2467777777777653
No 445
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism]
Probab=53.74 E-value=79 Score=29.13 Aligned_cols=69 Identities=17% Similarity=0.160 Sum_probs=44.6
Q ss_pred CCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHh
Q psy8850 85 RGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRS 164 (397)
Q Consensus 85 ~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~ 164 (397)
++.+|++-+. ..-..-++.+.+.|.+++.+|.+ .+.+++.+ -++..|++++. .|-..+++..++..++
T Consensus 178 ~~~~Vv~iD~--GvK~nIlr~L~~rg~~vtVVP~~----t~~eeIl~---~~pDGiflSNG---PGDP~~~~~~i~~ik~ 245 (368)
T COG0505 178 PGKHVVVIDF--GVKRNILRELVKRGCRVTVVPAD----TSAEEILA---LNPDGIFLSNG---PGDPAPLDYAIETIKE 245 (368)
T ss_pred CCcEEEEEEc--CccHHHHHHHHHCCCeEEEEcCC----CCHHHHHh---hCCCEEEEeCC---CCChhHHHHHHHHHHH
Confidence 3556666544 33334466677779999999987 35565543 48899999876 4665566555555554
Q ss_pred c
Q psy8850 165 K 165 (397)
Q Consensus 165 ~ 165 (397)
.
T Consensus 246 l 246 (368)
T COG0505 246 L 246 (368)
T ss_pred H
Confidence 3
No 446
>cd01137 PsaA Metal binding protein PsaA. These proteins have been shown to function as initial receptors in ABC transport of Mn2+ and as surface adhesins in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=53.48 E-value=1.2e+02 Score=27.14 Aligned_cols=71 Identities=15% Similarity=0.145 Sum_probs=45.0
Q ss_pred CCEEEEcCCCChhhHHHHHHHhhCCcEEEEe-ccCCCCCCCHHHHHHHh---c-CCceEEEEecccCcccccccHHHHHH
Q psy8850 86 GKHIITVQTEHKSVLDSIRKLENDGFRVTYL-KPKNNGLITLSQLEEKI---C-SDTILVSVMLVNNEIGVIQPILEIGE 160 (397)
Q Consensus 86 g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v-~~~~~~~~d~~~l~~~i---~-~~~~~v~~~~~~~~tG~~~~l~~i~~ 160 (397)
+..+++. |+++....+.+ |+++..+ ....+..+.+.+|.+.+ + .+.++|+++...++ +.+..
T Consensus 177 ~~~~v~~---H~af~Y~~~~y---Gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~-------~~~~~ 243 (287)
T cd01137 177 KRKLVTS---EGAFSYFAKAY---GLKEAYLWPINTEEEGTPKQVATLIEQVKKEKVPAVFVESTVND-------RLMKQ 243 (287)
T ss_pred cCEEEEe---cccHHHHHHHc---CCeEeecccCCCCCCCCHHHHHHHHHHHHHhCCCEEEEeCCCCh-------HHHHH
Confidence 4567764 44666666666 9887764 33344556777776665 3 36788877654332 55667
Q ss_pred HHHhcCcEE
Q psy8850 161 LCRSKGVIF 169 (397)
Q Consensus 161 l~~~~gi~l 169 (397)
++++.|+.+
T Consensus 244 ia~~~gv~v 252 (287)
T cd01137 244 VAKETGAKI 252 (287)
T ss_pred HHHHhCCcc
Confidence 788888875
No 447
>PF00290 Trp_syntA: Tryptophan synthase alpha chain; InterPro: IPR002028 Tryptophan synthase (4.2.1.20 from EC) catalyzes the last step in the biosynthesis of tryptophan [, ]: L-serine + 1-(indol-3-yl)glycerol 3-phosphate = L-tryptophan + glyceraldehyde 3-phosphate + H2O It has two functional domains, each found in bacteria and plants on a separate subunit. In Escherichia coli, the 2 subunits, A and B, are encoded by the trpA and trpB genes respectively. The alpha chain is for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate and the beta chain IPR006653 from INTERPRO is for the synthesis of tryptophan from indole and serine. In fungi the two domains are fused together in a single multifunctional protein, in the order: (NH2-A-B-COOH) [, ]. The two domains of the Neurospora crassa polypeptide are linked by a connector of 54-amino acid residues that has less than 25% identity to the 45-residue connector of the Saccharomyces cerevisiae (Baker's yeast) polypeptide. Two acidic residues are believed to serve as proton donors/acceptors in the enzyme's catalytic mechanism.; GO: 0004834 tryptophan synthase activity, 0006568 tryptophan metabolic process; PDB: 1TJR_B 1RD5_B 1K8X_A 1QOQ_A 1KFE_A 1KFB_A 2CLO_A 1TTP_A 2RH9_A 1K7F_A ....
Probab=53.04 E-value=1.6e+02 Score=25.97 Aligned_cols=82 Identities=6% Similarity=0.018 Sum_probs=51.7
Q ss_pred CEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCccccccc----HHHHHHHH
Q psy8850 87 KHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP----ILEIGELC 162 (397)
Q Consensus 87 ~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~----l~~i~~l~ 162 (397)
+-+++++.-+.........+...|+.++.+=... ...+.+++.......+|++.+....||...+ +++..+..
T Consensus 117 dGlIipDLP~ee~~~~~~~~~~~gl~~I~lv~p~---t~~~Ri~~i~~~a~gFiY~vs~~GvTG~~~~~~~~l~~~i~~i 193 (259)
T PF00290_consen 117 DGLIIPDLPPEESEELREAAKKHGLDLIPLVAPT---TPEERIKKIAKQASGFIYLVSRMGVTGSRTELPDELKEFIKRI 193 (259)
T ss_dssp EEEEETTSBGGGHHHHHHHHHHTT-EEEEEEETT---S-HHHHHHHHHH-SSEEEEESSSSSSSTTSSCHHHHHHHHHHH
T ss_pred CEEEEcCCChHHHHHHHHHHHHcCCeEEEEECCC---CCHHHHHHHHHhCCcEEEeeccCCCCCCcccchHHHHHHHHHH
Confidence 7789998877666655555666688766542221 2456676666666778888878888998654 45666666
Q ss_pred Hhc-CcEEEE
Q psy8850 163 RSK-GVIFHC 171 (397)
Q Consensus 163 ~~~-gi~liv 171 (397)
|++ +.++++
T Consensus 194 k~~~~~Pv~v 203 (259)
T PF00290_consen 194 KKHTDLPVAV 203 (259)
T ss_dssp HHTTSS-EEE
T ss_pred HhhcCcceEE
Confidence 666 466654
No 448
>cd01455 vWA_F11C1-5a_type Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A
Probab=52.67 E-value=34 Score=28.56 Aligned_cols=35 Identities=26% Similarity=0.091 Sum_probs=28.3
Q ss_pred eEEEEecccCcccccccHHHHHHHHHhcCcEEEEe
Q psy8850 138 ILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCD 172 (397)
Q Consensus 138 ~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD 172 (397)
.+|.++..+|..|.+.|.+.-+++++++|+.++.=
T Consensus 114 vvILLTDG~n~~~~i~P~~aAa~lA~~~gV~iytI 148 (191)
T cd01455 114 IVIVLSDANLERYGIQPKKLADALAREPNVNAFVI 148 (191)
T ss_pred EEEEEeCCCcCCCCCChHHHHHHHHHhCCCEEEEE
Confidence 47788888888888888777788999999977653
No 449
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=52.19 E-value=1.5e+02 Score=25.15 Aligned_cols=92 Identities=17% Similarity=0.227 Sum_probs=50.4
Q ss_pred cEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcCCceE
Q psy8850 60 EIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTIL 139 (397)
Q Consensus 60 ~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~ 139 (397)
.+++..||..|...+-. |. +.|-.|.+-++... ..+..+...| ++.++.-+ ...+++ +...+
T Consensus 11 ~vlVvGgG~va~rk~~~-Ll----~~ga~VtVvsp~~~---~~l~~l~~~~-~i~~~~~~----~~~~dl-----~~~~l 72 (205)
T TIGR01470 11 AVLVVGGGDVALRKARL-LL----KAGAQLRVIAEELE---SELTLLAEQG-GITWLARC----FDADIL-----EGAFL 72 (205)
T ss_pred eEEEECcCHHHHHHHHH-HH----HCCCEEEEEcCCCC---HHHHHHHHcC-CEEEEeCC----CCHHHh-----CCcEE
Confidence 58888888888776654 44 35555555445333 2222333324 56655432 233343 23445
Q ss_pred EEEecccCcccccccHHHHHHHHHhcCcEEE-Eecc
Q psy8850 140 VSVMLVNNEIGVIQPILEIGELCRSKGVIFH-CDAA 174 (397)
Q Consensus 140 v~~~~~~~~tG~~~~l~~i~~l~~~~gi~li-vD~a 174 (397)
|+.. ||....-+.+...|++.|+++- +|+.
T Consensus 73 Vi~a-----t~d~~ln~~i~~~a~~~~ilvn~~d~~ 103 (205)
T TIGR01470 73 VIAA-----TDDEELNRRVAHAARARGVPVNVVDDP 103 (205)
T ss_pred EEEC-----CCCHHHHHHHHHHHHHcCCEEEECCCc
Confidence 4443 2333234679999999999883 4543
No 450
>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]
Probab=51.87 E-value=1.1e+02 Score=27.54 Aligned_cols=118 Identities=16% Similarity=0.044 Sum_probs=64.2
Q ss_pred cEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCC--ChhhHHHHHHHhhCCcEEEEeccCCCC--CCCHHHHHHHhcC
Q psy8850 60 EIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTE--HKSVLDSIRKLENDGFRVTYLKPKNNG--LITLSQLEEKICS 135 (397)
Q Consensus 60 ~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~--~~s~~~~~~~~~~~g~~v~~v~~~~~~--~~d~~~l~~~i~~ 135 (397)
+-++|-|+.++|.+-..+...+...=+.+.++..+. |..+ ..+......|..++.++...+. ....+.+.+-+.+
T Consensus 65 dTlvT~GgiQSNh~r~tAavA~~lGl~~v~ile~~~~~y~~n-gn~Ll~~l~G~~~~~~~~~~d~~~~~~~~~~~e~~~~ 143 (323)
T COG2515 65 DTLVTYGGIQSNHVRQTAAVAAKLGLKCVLILENIEANYLLN-GNLLLSKLMGAEVRAVDAGTDIGINASAEELAEEVRK 143 (323)
T ss_pred cEEEEecccchhHHHHHHHHHHhcCCcEEEEEeccccccccc-cchhhhhhcCceEEEecCCCChhhchhhHHHHHHHHh
Confidence 378888999988876665554322223344444443 1111 0111112228888888766444 3344555554443
Q ss_pred --CceEEEEecccCcc---cccccHHHHHHHHHhc-CcEEEEecccccC
Q psy8850 136 --DTILVSVMLVNNEI---GVIQPILEIGELCRSK-GVIFHCDAAQAVG 178 (397)
Q Consensus 136 --~~~~v~~~~~~~~t---G~~~~l~~i~~l~~~~-gi~livD~a~~~~ 178 (397)
+...++.+...||. |.+--..+|.+-++++ .+-.+|.++.+.|
T Consensus 144 ~g~kpyvIp~GG~~~~g~lGyv~~a~Ei~~Q~~~~~~fD~vVva~gs~g 192 (323)
T COG2515 144 QGGKPYVIPEGGSSPLGALGYVRLALEIAEQAEQLLKFDSVVVAPGSGG 192 (323)
T ss_pred cCCCCcEeccCCcCccccccHHHHHHHHHHHHhhccCCCEEEEeCCCcc
Confidence 34566666667784 4555567888877763 4444555554433
No 451
>COG0329 DapA Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=51.70 E-value=1.9e+02 Score=26.23 Aligned_cols=153 Identities=16% Similarity=0.121 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHhCCCCCcEEEeCChhHHHHH-------HHHHhHhhhccCCCEEEEcCCCChhhHHHHHHH---hhCCcE
Q psy8850 43 IEKARNEVAQLIYADPREIIWTSGATESNNL-------AIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKL---ENDGFR 112 (397)
Q Consensus 43 ~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~-------~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~---~~~g~~ 112 (397)
.+.+++.+..+.....+.|++..++.+...+ ++....... +.+-.|++... -.++..+++.. .+.|+.
T Consensus 24 ~~a~~~lv~~li~~Gv~gi~~~GttGE~~~Ls~eEr~~v~~~~v~~~-~grvpviaG~g-~~~t~eai~lak~a~~~Gad 101 (299)
T COG0329 24 EEALRRLVEFLIAAGVDGLVVLGTTGESPTLTLEERKEVLEAVVEAV-GGRVPVIAGVG-SNSTAEAIELAKHAEKLGAD 101 (299)
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCCccchhcCHHHHHHHHHHHHHHH-CCCCcEEEecC-CCcHHHHHHHHHHHHhcCCC
Confidence 4556666666666554445554443332221 122111111 22223554333 23444444443 334665
Q ss_pred EEEeccCCCCCCCHHHHHHHh----cC-CceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecccccCccccccCcc
Q psy8850 113 VTYLKPKNNGLITLSQLEEKI----CS-DTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQAVGKIDINIQNY 187 (397)
Q Consensus 113 v~~v~~~~~~~~d~~~l~~~i----~~-~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~~~~~~~~~~~~ 187 (397)
=..+-.......+.+.+.+.. .. +..+++.. .-+.||.-++.+.+.++++-.++.=+=|.+-......--....
T Consensus 102 ~il~v~PyY~k~~~~gl~~hf~~ia~a~~lPvilYN-~P~~tg~~l~~e~i~~la~~~nivgiKd~~gd~~~~~~~~~~~ 180 (299)
T COG0329 102 GILVVPPYYNKPSQEGLYAHFKAIAEAVDLPVILYN-IPSRTGVDLSPETIARLAEHPNIVGVKDSSGDLDRLEEIIAAL 180 (299)
T ss_pred EEEEeCCCCcCCChHHHHHHHHHHHHhcCCCEEEEe-CccccCCCCCHHHHHHHhcCCCEEEEEeCCcCHHHHHHHHHhc
Confidence 444333322233344444332 22 33344444 4467899999999999999336666666654322221100111
Q ss_pred cc-cEEEecccc
Q psy8850 188 KV-DLMSFSAHK 198 (397)
Q Consensus 188 ~~-d~~~~s~~K 198 (397)
+. |+.++|+.=
T Consensus 181 ~~~~f~v~~G~d 192 (299)
T COG0329 181 GDRDFIVLSGDD 192 (299)
T ss_pred CccCeeEEeCch
Confidence 22 677766544
No 452
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.
Probab=51.45 E-value=35 Score=33.85 Aligned_cols=32 Identities=13% Similarity=0.083 Sum_probs=27.4
Q ss_pred ccCcccccccHHHHHHHHHhcCcEEEEecccc
Q psy8850 145 VNNEIGVIQPILEIGELCRSKGVIFHCDAAQA 176 (397)
Q Consensus 145 ~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~ 176 (397)
+...-|...+++++++.||++|+.||+|.++.
T Consensus 152 ~~~~~G~~~e~k~lV~~aH~~Gi~VilD~V~N 183 (542)
T TIGR02402 152 PHNAYGGPDDLKALVDAAHGLGLGVILDVVYN 183 (542)
T ss_pred cccccCCHHHHHHHHHHHHHCCCEEEEEEccC
Confidence 44556788889999999999999999998865
No 453
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=50.75 E-value=15 Score=33.01 Aligned_cols=32 Identities=16% Similarity=0.335 Sum_probs=27.3
Q ss_pred ccCcccccccHHHHHHHHHhcCcEEEEecccc
Q psy8850 145 VNNEIGVIQPILEIGELCRSKGVIFHCDAAQA 176 (397)
Q Consensus 145 ~~~~tG~~~~l~~i~~l~~~~gi~livD~a~~ 176 (397)
+...-|...+++++++.||++|+.||+|-+..
T Consensus 44 vd~~~Gt~~d~~~Lv~~~h~~gi~VilD~V~N 75 (316)
T PF00128_consen 44 VDPRFGTMEDFKELVDAAHKRGIKVILDVVPN 75 (316)
T ss_dssp ESTTTBHHHHHHHHHHHHHHTTCEEEEEEETS
T ss_pred cccccchhhhhhhhhhccccccceEEEeeecc
Confidence 44456888899999999999999999998753
No 454
>COG0616 SppA Periplasmic serine proteases (ClpP class) [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=50.63 E-value=1.5e+02 Score=27.13 Aligned_cols=84 Identities=20% Similarity=0.193 Sum_probs=49.8
Q ss_pred CCHHHHHHHhc-----CCceEEEEecccCcccccccHHHHHHHHHhc---C-cEEEEecccccCccccccCcccccEEEe
Q psy8850 124 ITLSQLEEKIC-----SDTILVSVMLVNNEIGVIQPILEIGELCRSK---G-VIFHCDAAQAVGKIDINIQNYKVDLMSF 194 (397)
Q Consensus 124 ~d~~~l~~~i~-----~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~---g-i~livD~a~~~~~~~~~~~~~~~d~~~~ 194 (397)
++.+.+++.++ ++.+.|++- .++|.|.+..-+.|++..+++ + ++++++..-+.|..-+.+ .+|=++.
T Consensus 80 ~~~~~~~~~l~~~~~~~~vk~vvL~-inSPGG~v~as~~i~~~l~~l~~~~PV~v~v~~~AASGGY~IA~---aAd~I~a 155 (317)
T COG0616 80 IGGDDIEEILRAARADPSVKAVVLR-INSPGGSVVASELIARALKRLRAKKPVVVSVGGYAASGGYYIAL---AADKIVA 155 (317)
T ss_pred ccHHHHHHHHHHHhcCCCCceEEEE-EECcCCchhHHHHHHHHHHHHhhcCCEEEEECCeecchhhhhhc---cCCEEEe
Confidence 45666665553 346666554 778899998876666555543 2 666666554433333333 4677777
Q ss_pred ccccccCCCCceEEEEecC
Q psy8850 195 SAHKIYGPKGIGALYIRRN 213 (397)
Q Consensus 195 s~~K~~g~~g~g~~~~~~~ 213 (397)
+.+-+.|+ +|++.....
T Consensus 156 ~p~si~GS--IGVi~~~~~ 172 (317)
T COG0616 156 DPSSITGS--IGVISGAPN 172 (317)
T ss_pred cCCceeee--ceeEEecCC
Confidence 75545565 467666443
No 455
>cd00984 DnaB_C DnaB helicase C terminal domain. The hexameric helicase DnaB unwinds the DNA duplex at the chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis.
Probab=50.10 E-value=1.5e+02 Score=25.42 Aligned_cols=48 Identities=10% Similarity=0.030 Sum_probs=25.3
Q ss_pred CCHHHHHHHhcC-----CceEEEEecccCcc-cc-ccc--------HHHHHHHHHhcCcEEEE
Q psy8850 124 ITLSQLEEKICS-----DTILVSVMLVNNEI-GV-IQP--------ILEIGELCRSKGVIFHC 171 (397)
Q Consensus 124 ~d~~~l~~~i~~-----~~~~v~~~~~~~~t-G~-~~~--------l~~i~~l~~~~gi~liv 171 (397)
++++++++.+.. ++++|++.+.+... +. ..+ +..|.++|+++|+.+++
T Consensus 106 ~~~~~l~~~i~~~~~~~~~~~vvID~l~~l~~~~~~~~~~~~~~~~~~~L~~la~~~~~~ii~ 168 (242)
T cd00984 106 LTVSDIRSRARRLKKEHGLGLIVIDYLQLMSGSKKKGNRQQEVAEISRSLKLLAKELNVPVIA 168 (242)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCchhcCCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEE
Confidence 456666655432 56677776665321 11 001 24566667777766554
No 456
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=49.79 E-value=1.1e+02 Score=22.98 Aligned_cols=64 Identities=16% Similarity=0.138 Sum_probs=37.8
Q ss_pred HHhhCCcEEEEeccCCCCCCCHHHHHHHh-cCCceEEEEecccCcccccccHHHHHHHHHhc---CcEEEEecc
Q psy8850 105 KLENDGFRVTYLKPKNNGLITLSQLEEKI-CSDTILVSVMLVNNEIGVIQPILEIGELCRSK---GVIFHCDAA 174 (397)
Q Consensus 105 ~~~~~g~~v~~v~~~~~~~~d~~~l~~~i-~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~---gi~livD~a 174 (397)
.+...|.++.....+ +..+++.+.+ ..++.+|.++... +.......++++.+|+. ++.+++=+.
T Consensus 22 ~l~~~G~~V~~lg~~----~~~~~l~~~~~~~~pdvV~iS~~~--~~~~~~~~~~i~~l~~~~~~~~~i~vGG~ 89 (119)
T cd02067 22 ALRDAGFEVIDLGVD----VPPEEIVEAAKEEDADAIGLSGLL--TTHMTLMKEVIEELKEAGLDDIPVLVGGA 89 (119)
T ss_pred HHHHCCCEEEECCCC----CCHHHHHHHHHHcCCCEEEEeccc--cccHHHHHHHHHHHHHcCCCCCeEEEECC
Confidence 344458888666533 4566666555 4578888776542 22334567777777776 355554433
No 457
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=48.05 E-value=55 Score=27.87 Aligned_cols=49 Identities=14% Similarity=0.110 Sum_probs=35.5
Q ss_pred HHHHHHHhcCCceEEEEecccCccccc-ccHHHHHHHHHhcCcEEEEecc
Q psy8850 126 LSQLEEKICSDTILVSVMLVNNEIGVI-QPILEIGELCRSKGVIFHCDAA 174 (397)
Q Consensus 126 ~~~l~~~i~~~~~~v~~~~~~~~tG~~-~~l~~i~~l~~~~gi~livD~a 174 (397)
++.+|+++.....++-+=.-...+-.. .-.+++.++|++|++++++++-
T Consensus 24 ~~~ve~al~~Gv~~vQlR~K~~~~~~~~~~a~~~~~lc~~~~v~liINd~ 73 (211)
T COG0352 24 LEWVEAALKGGVTAVQLREKDLSDEEYLALAEKLRALCQKYGVPLIINDR 73 (211)
T ss_pred HHHHHHHHhCCCeEEEEecCCCChHHHHHHHHHHHHHHHHhCCeEEecCc
Confidence 788888888887777555444333332 2247899999999999999854
No 458
>PRK11070 ssDNA exonuclease RecJ; Provisional
Probab=47.80 E-value=2.2e+02 Score=28.57 Aligned_cols=99 Identities=10% Similarity=0.119 Sum_probs=63.4
Q ss_pred CChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHH---HhhCCc-EE-EEeccC--CCCCCCHHHHHHHhcCCc
Q psy8850 65 SGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRK---LENDGF-RV-TYLKPK--NNGLITLSQLEEKICSDT 137 (397)
Q Consensus 65 ~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~---~~~~g~-~v-~~v~~~--~~~~~d~~~l~~~i~~~~ 137 (397)
.+...|.+.+..++. +....+++.+..-.+.....-. +.+.|. .+ ..+|.. +...++.+.+++...+.+
T Consensus 53 ~~m~~a~~ri~~ai~----~~e~I~I~gDyD~DGitstail~~~L~~~g~~~~~~~IP~R~~eGYGl~~~~i~~~~~~~~ 128 (575)
T PRK11070 53 SGIEKAVELLYNALR----EGTRIIVVGDFDADGATSTALSVLALRSLGCSNVDYLVPNRFEDGYGLSPEVVDQAHARGA 128 (575)
T ss_pred hCHHHHHHHHHHHHH----CCCEEEEEEecCccHHHHHHHHHHHHHHcCCCceEEEeCCCCcCCCCCCHHHHHHHHhcCC
Confidence 677888888888776 4445667777766666555432 344576 44 456643 444689999998887777
Q ss_pred eEEEEecccCcccccccHHHHHHHHHhcCcEEEEec
Q psy8850 138 ILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDA 173 (397)
Q Consensus 138 ~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~ 173 (397)
++++.+.. |.. +.+++ +.|+++|+-+|+=+
T Consensus 129 ~LiItvD~----Gi~-~~e~i-~~a~~~gidvIVtD 158 (575)
T PRK11070 129 QLIVTVDN----GIS-SHAGV-AHAHALGIPVLVTD 158 (575)
T ss_pred CEEEEEcC----CcC-CHHHH-HHHHHCCCCEEEEC
Confidence 76655543 331 34444 55899999666533
No 459
>cd01121 Sms Sms (bacterial radA) DNA repair protein. This protein is not related to archael radA any more than is to other RecA-like NTPases. Sms has a role in recombination and recombinational repair and is responsible for the stabilization or processing of branched DNA molecules.
Probab=47.80 E-value=2.1e+02 Score=26.88 Aligned_cols=47 Identities=13% Similarity=0.200 Sum_probs=32.0
Q ss_pred CHHHHHHHhcC-CceEEEEecccCcc--------ccccc----HHHHHHHHHhcCcEEEE
Q psy8850 125 TLSQLEEKICS-DTILVSVMLVNNEI--------GVIQP----ILEIGELCRSKGVIFHC 171 (397)
Q Consensus 125 d~~~l~~~i~~-~~~~v~~~~~~~~t--------G~~~~----l~~i~~l~~~~gi~liv 171 (397)
+++.+.+.+.+ ++++|++++.++.. |...- +..+.++++++|+.+++
T Consensus 146 ~le~I~~~i~~~~~~lVVIDSIq~l~~~~~~~~~g~~~qvr~~~~~L~~lak~~~itvil 205 (372)
T cd01121 146 NLEDILASIEELKPDLVIIDSIQTVYSSELTSAPGSVSQVRECTAELMRFAKERNIPIFI 205 (372)
T ss_pred cHHHHHHHHHhcCCcEEEEcchHHhhccccccCCCCHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 67888877754 78999999886542 11111 34578889999986644
No 460
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=47.47 E-value=2e+02 Score=25.45 Aligned_cols=83 Identities=8% Similarity=-0.017 Sum_probs=52.1
Q ss_pred CEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCccccccc----HHHHHHHH
Q psy8850 87 KHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP----ILEIGELC 162 (397)
Q Consensus 87 ~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~----l~~i~~l~ 162 (397)
|-|++++..+.-.......+.+.|+..+.+=... .+.+.++.....-.-+|++.+....||.... ++++.+..
T Consensus 121 dgviipDLP~ee~~~~~~~~~~~gi~~I~lv~Pt---T~~eri~~i~~~a~gFIY~vS~~GvTG~~~~~~~~~~~~i~~i 197 (263)
T CHL00200 121 KGLIIPDLPYEESDYLISVCNLYNIELILLIAPT---SSKSRIQKIARAAPGCIYLVSTTGVTGLKTELDKKLKKLIETI 197 (263)
T ss_pred eEEEecCCCHHHHHHHHHHHHHcCCCEEEEECCC---CCHHHHHHHHHhCCCcEEEEcCCCCCCCCccccHHHHHHHHHH
Confidence 7788888877666555566666687766543221 1355666555554557766567777887533 45666666
Q ss_pred Hhc-CcEEEEe
Q psy8850 163 RSK-GVIFHCD 172 (397)
Q Consensus 163 ~~~-gi~livD 172 (397)
|++ +.++.+|
T Consensus 198 r~~t~~Pi~vG 208 (263)
T CHL00200 198 KKMTNKPIILG 208 (263)
T ss_pred HHhcCCCEEEE
Confidence 665 7777775
No 461
>cd08071 MPN_DUF2466 Mov34/MPN/PAD-1 family. Mov34 DUF2466 (also known as DNA repair protein RadC) domain of unknown function contains the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity. However, to date, the name RadC has been misleading and no function has been determined.
Probab=47.14 E-value=44 Score=25.20 Aligned_cols=45 Identities=11% Similarity=0.156 Sum_probs=30.2
Q ss_pred CCHHH-HHHHhcCCceEEEEecccCccccccc-------HHHHHHHHHhcCcEE
Q psy8850 124 ITLSQ-LEEKICSDTILVSVMLVNNEIGVIQP-------ILEIGELCRSKGVIF 169 (397)
Q Consensus 124 ~d~~~-l~~~i~~~~~~v~~~~~~~~tG~~~~-------l~~i~~l~~~~gi~l 169 (397)
+++.+ ++.++..+...+++.|. .|.|...| -++|.+.|+--|+.+
T Consensus 46 v~~R~i~~~aL~~~A~~vil~HN-HPsG~~~PS~~D~~~T~~l~~~~~~l~i~l 98 (113)
T cd08071 46 VHPREIFKEALRHNAAAIILAHN-HPSGDPTPSREDIELTKRLKEAGELLGIRL 98 (113)
T ss_pred cCHHHHHHHHHHHhhheEEEEee-CCCCCCCCCHHHHHHHHHHHHHHHHCCCEE
Confidence 44444 44667777777777755 47898877 256777777777765
No 462
>PLN03013 cysteine synthase
Probab=47.02 E-value=99 Score=29.60 Aligned_cols=82 Identities=10% Similarity=0.047 Sum_probs=46.0
Q ss_pred EEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcCCceEE
Q psy8850 61 IIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILV 140 (397)
Q Consensus 61 i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v 140 (397)
|+-.++|..|+.++..+-.. +-+-.|++++.........++.+ |++++.++.+....-..+..+++..+....+
T Consensus 178 VVeaSSGN~G~ALA~~a~~~---G~~~~VvvP~~~s~~K~~~ira~---GAeVi~v~~~~~~~~a~~~A~ela~~~~g~~ 251 (429)
T PLN03013 178 LVEPTSGNTGIGLAFIAASR---GYRLILTMPASMSMERRVLLKAF---GAELVLTDPAKGMTGAVQKAEEILKNTPDAY 251 (429)
T ss_pred EEEECCcHHHHHHHHHHHHc---CCCEEEEECCCCcHHHHHHHHHc---CCEEEEECCCCChHHHHHHHHHHHhhcCCeE
Confidence 77777777777776665442 33456777777656555555555 9999988654221011233333334434455
Q ss_pred EEecccCc
Q psy8850 141 SVMLVNNE 148 (397)
Q Consensus 141 ~~~~~~~~ 148 (397)
++....||
T Consensus 252 ~~~qy~Np 259 (429)
T PLN03013 252 MLQQFDNP 259 (429)
T ss_pred eCCCCCCH
Confidence 54444455
No 463
>KOG2865|consensus
Probab=46.92 E-value=1.4e+02 Score=26.75 Aligned_cols=81 Identities=12% Similarity=0.234 Sum_probs=56.0
Q ss_pred cCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCccccc--cc-----HH
Q psy8850 84 KRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVI--QP-----IL 156 (397)
Q Consensus 84 ~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~--~~-----l~ 156 (397)
+.|..|+++--+-+.......-++..| ++.+.+.|. .|.+.++++...--.+|-+..-..+|+.. .| .+
T Consensus 83 k~GSQviiPyR~d~~~~r~lkvmGdLG-Qvl~~~fd~---~DedSIr~vvk~sNVVINLIGrd~eTknf~f~Dvn~~~ae 158 (391)
T KOG2865|consen 83 KMGSQVIIPYRGDEYDPRHLKVMGDLG-QVLFMKFDL---RDEDSIRAVVKHSNVVINLIGRDYETKNFSFEDVNVHIAE 158 (391)
T ss_pred hcCCeEEEeccCCccchhheeeccccc-ceeeeccCC---CCHHHHHHHHHhCcEEEEeeccccccCCcccccccchHHH
Confidence 678889987665555555555554434 566666662 47888998887655677676677777753 23 47
Q ss_pred HHHHHHHhcCcE
Q psy8850 157 EIGELCRSKGVI 168 (397)
Q Consensus 157 ~i~~l~~~~gi~ 168 (397)
+|+.+|++-|+-
T Consensus 159 rlAricke~GVe 170 (391)
T KOG2865|consen 159 RLARICKEAGVE 170 (391)
T ss_pred HHHHHHHhhChh
Confidence 899999999874
No 464
>TIGR00506 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase. Several members of the family are bifunctional, involving both ribA and ribB function. In these cases, ribA tends to be on the C-terminal end of the protein and ribB tends to be on the N-terminal.
Probab=46.80 E-value=44 Score=28.12 Aligned_cols=34 Identities=15% Similarity=0.110 Sum_probs=27.8
Q ss_pred CceEEEEecccCcccccccHHHHHHHHHhcCcEEE
Q psy8850 136 DTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFH 170 (397)
Q Consensus 136 ~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~li 170 (397)
.+..++.+ .-+..|...+.+++.++|++||++++
T Consensus 157 ~p~~vicE-il~~dG~m~~~~~~~~fA~~~~l~~i 190 (199)
T TIGR00506 157 KPAGVICE-MMNDDGTMARKPELMEYAKKHNLKLI 190 (199)
T ss_pred CceEEEEE-EeCCCCCccCHHHHHHHHHHcCCcEE
Confidence 46666555 45678999999999999999999885
No 465
>PRK06091 membrane protein FdrA; Validated
Probab=46.57 E-value=1e+02 Score=30.42 Aligned_cols=72 Identities=8% Similarity=0.085 Sum_probs=43.5
Q ss_pred CChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEecc
Q psy8850 95 EHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAA 174 (397)
Q Consensus 95 ~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a 174 (397)
.+.++..+.........-+..+|-. .-++.+++.+.....+++++..- | ...-++|.++|+++|+.++==++
T Consensus 104 ~~~t~~~a~~~lpe~DLAvIsVPa~----~v~~al~ea~~~G~~viI~S~gf---g-~~~E~~L~e~Ar~~GlrvmGPNC 175 (555)
T PRK06091 104 QVRRWDSACQKLPDANLALISVAGE----YAAELAEQALDRNLNVMMFSDNV---T-LEDEIRLKTRAREKGLLVMGPDC 175 (555)
T ss_pred ccccHHHHHhcCCCCCEEEEecCHH----HHHHHHHHHHHcCCeEEEEcCCC---C-HHHHHHHHHHHHHcCCEEECCCC
Confidence 4555555554443223344444432 24677888887776666665532 2 23347899999999998875544
No 466
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=46.52 E-value=36 Score=29.68 Aligned_cols=26 Identities=15% Similarity=0.204 Sum_probs=22.4
Q ss_pred ccHHHHHHHHHhcCcEEEEecccccC
Q psy8850 153 QPILEIGELCRSKGVIFHCDAAQAVG 178 (397)
Q Consensus 153 ~~l~~i~~l~~~~gi~livD~a~~~~ 178 (397)
...+.+.++.+++++-+++|++|-+.
T Consensus 53 l~~e~l~~~l~e~~i~llIDATHPyA 78 (257)
T COG2099 53 LGAEGLAAFLREEGIDLLIDATHPYA 78 (257)
T ss_pred CCHHHHHHHHHHcCCCEEEECCChHH
Confidence 45689999999999999999998643
No 467
>TIGR03249 KdgD 5-dehydro-4-deoxyglucarate dehydratase. 5-dehydro-4-deoxyglucarate dehydratase not only catalyzes the dehydration of the substrate (diol to ketone + water), but causes the decarboxylation of the intermediate product to yield 2-oxoglutarate semialdehyde (2,5-dioxopentanoate). The gene for the enzyme is usually observed in the vicinity of transporters and dehydratases handling D-galactarate and D-gluconate as well as aldehyde dehydrogenases which convert the product to alpha-ketoglutarate.
Probab=46.15 E-value=2.2e+02 Score=25.58 Aligned_cols=27 Identities=7% Similarity=-0.022 Sum_probs=21.1
Q ss_pred cccccccHHHHHHHHHhc-CcEEEEecc
Q psy8850 148 EIGVIQPILEIGELCRSK-GVIFHCDAA 174 (397)
Q Consensus 148 ~tG~~~~l~~i~~l~~~~-gi~livD~a 174 (397)
.+|..++.+.+.++++++ ++.-|=|.+
T Consensus 138 ~~g~~l~~~~~~~La~~~~nvvgiKds~ 165 (296)
T TIGR03249 138 RDNAVLNADTLERLADRCPNLVGFKDGI 165 (296)
T ss_pred CCCCCCCHHHHHHHHhhCCCEEEEEeCC
Confidence 578888999999999866 666666754
No 468
>PRK00414 gmhA phosphoheptose isomerase; Reviewed
Probab=46.11 E-value=1.6e+02 Score=24.59 Aligned_cols=38 Identities=18% Similarity=0.207 Sum_probs=27.2
Q ss_pred cCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEeccc
Q psy8850 134 CSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQ 175 (397)
Q Consensus 134 ~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~ 175 (397)
+++.-++.++. +|...++-++++.|+++|+.+|.=...
T Consensus 110 ~~~Dv~I~iS~----SG~t~~~i~~~~~ak~~g~~iI~iT~~ 147 (192)
T PRK00414 110 REGDVLLGIST----SGNSGNIIKAIEAARAKGMKVITLTGK 147 (192)
T ss_pred CCCCEEEEEeC----CCCCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 34445555554 577778889999999999988765443
No 469
>smart00481 POLIIIAc DNA polymerase alpha chain like domain. DNA polymerase alpha chain like domain, incl. family of hypothetical proteins
Probab=45.75 E-value=63 Score=21.32 Aligned_cols=46 Identities=13% Similarity=0.159 Sum_probs=29.1
Q ss_pred CCCCCHHHHHHH-hcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEE
Q psy8850 121 NGLITLSQLEEK-ICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFH 170 (397)
Q Consensus 121 ~~~~d~~~l~~~-i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~li 170 (397)
++.+.++++-+. ...+...+.++..++..| ..++.+.++++|+.++
T Consensus 12 ~~~~~~~~~~~~a~~~g~~~v~iTDh~~~~~----~~~~~~~~~~~gi~~i 58 (67)
T smart00481 12 DGALSPEELVKRAKELGLKAIAITDHGNLFG----AVEFYKAAKKAGIKPI 58 (67)
T ss_pred cccCCHHHHHHHHHHcCCCEEEEeeCCcccC----HHHHHHHHHHcCCeEE
Confidence 344566665554 445778887876654444 3466677888887665
No 470
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=45.10 E-value=2.2e+02 Score=25.21 Aligned_cols=82 Identities=11% Similarity=0.100 Sum_probs=49.2
Q ss_pred CCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCccccccc----HHHHHHH
Q psy8850 86 GKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQP----ILEIGEL 161 (397)
Q Consensus 86 g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~----l~~i~~l 161 (397)
-|-+++++.-..-.......+.+.|+.++.+-... .+.+.+++......-.+++.+.+.-||...+ ++++++-
T Consensus 123 vdGlivpDLP~ee~~~~~~~~~~~gi~~I~lvaPt---t~~~rl~~i~~~a~GFiY~vs~~GvTG~~~~~~~~~~~~v~~ 199 (265)
T COG0159 123 VDGLLVPDLPPEESDELLKAAEKHGIDPIFLVAPT---TPDERLKKIAEAASGFIYYVSRMGVTGARNPVSADVKELVKR 199 (265)
T ss_pred CCEEEeCCCChHHHHHHHHHHHHcCCcEEEEeCCC---CCHHHHHHHHHhCCCcEEEEecccccCCCcccchhHHHHHHH
Confidence 37788877755555544455555677766553221 1345565555544567777777777888766 5666666
Q ss_pred HHhc-CcEEE
Q psy8850 162 CRSK-GVIFH 170 (397)
Q Consensus 162 ~~~~-gi~li 170 (397)
.|++ +++++
T Consensus 200 vr~~~~~Pv~ 209 (265)
T COG0159 200 VRKYTDVPVL 209 (265)
T ss_pred HHHhcCCCeE
Confidence 6665 44443
No 471
>PLN02361 alpha-amylase
Probab=45.10 E-value=60 Score=30.76 Aligned_cols=69 Identities=14% Similarity=0.215 Sum_probs=43.2
Q ss_pred hhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEeccc
Q psy8850 98 SVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQ 175 (397)
Q Consensus 98 s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~ 175 (397)
....-+..++..|++.++++......-. ..-...-+-.++..-|...+++.+++.||++|+.||+|.+.
T Consensus 30 ~i~~kl~~l~~lG~t~iwl~P~~~~~~~---------~GY~~~d~y~~~~~~Gt~~el~~li~~~h~~gi~vi~D~V~ 98 (401)
T PLN02361 30 NLEGKVPDLAKSGFTSAWLPPPSQSLAP---------EGYLPQNLYSLNSAYGSEHLLKSLLRKMKQYNVRAMADIVI 98 (401)
T ss_pred HHHHHHHHHHHcCCCEEEeCCCCcCCCC---------CCCCcccccccCcccCCHHHHHHHHHHHHHcCCEEEEEEcc
Confidence 4444555666779999988764221000 01001101112334688888999999999999999999874
No 472
>PRK01792 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=44.94 E-value=48 Score=28.21 Aligned_cols=34 Identities=21% Similarity=0.187 Sum_probs=27.5
Q ss_pred CceEEEEecccCcccccccHHHHHHHHHhcCcEEE
Q psy8850 136 DTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFH 170 (397)
Q Consensus 136 ~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~li 170 (397)
.+..++.+ .-+..|.....+++.++|++||++++
T Consensus 167 ~p~~vicE-il~~dG~ma~~~~~~~fA~~~~l~~i 200 (214)
T PRK01792 167 KEAGVICE-ITNDDGTMARTPEIVEFAKKFGYAVV 200 (214)
T ss_pred CceEEEEE-EecCCCCccCHHHHHHHHHHcCCcEE
Confidence 45566555 45677999999999999999999884
No 473
>PRK06371 translation initiation factor IF-2B subunit alpha; Provisional
Probab=44.74 E-value=2.5e+02 Score=25.79 Aligned_cols=82 Identities=15% Similarity=0.122 Sum_probs=43.3
Q ss_pred CCCEEEEcC--CCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhc-CCceEEEE-ecccCccccccc-H--HH
Q psy8850 85 RGKHIITVQ--TEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKIC-SDTILVSV-MLVNNEIGVIQP-I--LE 157 (397)
Q Consensus 85 ~g~~vl~~~--~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~-~~~~~v~~-~~~~~~tG~~~~-l--~~ 157 (397)
+..+|++.+ |...+..-....+...|+.++.+.-+. +-..+. .+...|++ ...-...|.+.. + -.
T Consensus 169 k~f~V~v~EsRP~~qG~rlta~eL~~~GI~vtlI~Dsa--------~~~~M~~~~Vd~VivGAd~I~aNG~v~NKiGT~~ 240 (329)
T PRK06371 169 KNIFVFVDETRPRLQGARLTAWELAQEGIDHAIIADNA--------AGYFMRKKEIDLVIVGADRIASNGDFANKIGTYE 240 (329)
T ss_pred CeeEEEECCCCCcchHHHHHHHHHHHCCCCEEEEcccH--------HHHHhhhcCCCEEEECccEEecCCCEeehhhHHH
Confidence 445777765 333333222344555698888876331 112222 23444433 222233454333 3 45
Q ss_pred HHHHHHhcCcEEEEecc
Q psy8850 158 IGELCRSKGVIFHCDAA 174 (397)
Q Consensus 158 i~~l~~~~gi~livD~a 174 (397)
++-+||.||+++++=+.
T Consensus 241 lAl~Ak~~~VPfyV~a~ 257 (329)
T PRK06371 241 KAVLAKVNGIPFYVAAP 257 (329)
T ss_pred HHHHHHHcCCCEEEecc
Confidence 77789999999987643
No 474
>PF04002 RadC: RadC-like JAB domain; InterPro: IPR001405 This family was named initially with reference to the Escherichia coli radC102 mutation which suggested that RadC was involved in repair of DNA lesions []. However the relevant mutation has subsequently been shown to be in recG, not radC []. In addition all attempts to characterise a radiation-related function for RadC in Streptococcus pneumoniae failed, suggesting that it is not involved in repair of DNA lesions, in recombination during transformation, in gene conversion, nor in mismatch repair [].; PDB: 2QLC_A.
Probab=44.62 E-value=47 Score=25.43 Aligned_cols=46 Identities=11% Similarity=0.117 Sum_probs=26.9
Q ss_pred CCCHHH-HHHHhcCCceEEEEecccCcccccccH-------HHHHHHHHhcCcEE
Q psy8850 123 LITLSQ-LEEKICSDTILVSVMLVNNEIGVIQPI-------LEIGELCRSKGVIF 169 (397)
Q Consensus 123 ~~d~~~-l~~~i~~~~~~v~~~~~~~~tG~~~~l-------~~i~~l~~~~gi~l 169 (397)
.+++.+ ++.++..+...+++.|.| |.|...|- ++|.+.|+..|+.+
T Consensus 50 ~v~~R~I~~~al~~~A~~vIl~HNH-PsG~~~PS~~D~~~T~~L~~~~~~l~I~l 103 (123)
T PF04002_consen 50 PVDPREIFRRALRLNASSVILAHNH-PSGDPEPSDADIALTRRLKKAARLLGIEL 103 (123)
T ss_dssp GCSHHHHHHHHHHTT-SEEEEEEE--TTS--S--HHHHHHHHHHHHHHHHHT-EE
T ss_pred cccHHHHHHHHHhhCCceEEEEEEc-CCCCCCCCHhHHHHHHHHHHHHHHcCCee
Confidence 345554 456677777777777654 78988772 56778888877765
No 475
>PTZ00314 inosine-5'-monophosphate dehydrogenase; Provisional
Probab=44.26 E-value=84 Score=30.81 Aligned_cols=54 Identities=17% Similarity=0.225 Sum_probs=33.9
Q ss_pred CCCHHHHHHHhcCCceEEEEecccCc-------cccccc----HHHHHHHHHhcCcEEEEecccc
Q psy8850 123 LITLSQLEEKICSDTILVSVMLVNNE-------IGVIQP----ILEIGELCRSKGVIFHCDAAQA 176 (397)
Q Consensus 123 ~~d~~~l~~~i~~~~~~v~~~~~~~~-------tG~~~~----l~~i~~l~~~~gi~livD~a~~ 176 (397)
..+.++.+.++.-...+|.+...... +|.=.| +.++.++|+++|+++|.|.-..
T Consensus 290 V~t~~~a~~~~~aGad~I~vg~g~Gs~~~t~~~~~~g~p~~~ai~~~~~~~~~~~v~vIadGGi~ 354 (495)
T PTZ00314 290 VVTADQAKNLIDAGADGLRIGMGSGSICITQEVCAVGRPQASAVYHVARYARERGVPCIADGGIK 354 (495)
T ss_pred cCCHHHHHHHHHcCCCEEEECCcCCcccccchhccCCCChHHHHHHHHHHHhhcCCeEEecCCCC
Confidence 35677777777777677755322111 111123 4677888999999999996533
No 476
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=44.10 E-value=56 Score=29.44 Aligned_cols=48 Identities=15% Similarity=0.133 Sum_probs=31.6
Q ss_pred CHHHHHHHhcCCceEEEEecccCccccc-ccHHHHHHHHHhcCcEEEEecccc
Q psy8850 125 TLSQLEEKICSDTILVSVMLVNNEIGVI-QPILEIGELCRSKGVIFHCDAAQA 176 (397)
Q Consensus 125 d~~~l~~~i~~~~~~v~~~~~~~~tG~~-~~l~~i~~l~~~~gi~livD~a~~ 176 (397)
-++.+++....+.+.+++-+- |.- .+-++|.++|+++|+.++==++.+
T Consensus 78 v~~~l~e~~~~gvk~avI~s~----Gf~~~~~~~l~~~a~~~girvlGPNc~G 126 (291)
T PRK05678 78 AADAILEAIDAGIDLIVCITE----GIPVLDMLEVKAYLERKKTRLIGPNCPG 126 (291)
T ss_pred HHHHHHHHHHCCCCEEEEECC----CCCHHHHHHHHHHHHHcCCEEECCCCCc
Confidence 467788877777776544332 221 112389999999999988655544
No 477
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=43.64 E-value=2.5e+02 Score=25.42 Aligned_cols=83 Identities=17% Similarity=0.105 Sum_probs=45.2
Q ss_pred cEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCC-CHHHHHHHhcCCce
Q psy8850 60 EIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLI-TLSQLEEKICSDTI 138 (397)
Q Consensus 60 ~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~-d~~~l~~~i~~~~~ 138 (397)
.|+=.+||..++-+++.+... .=+-.+++++..-......++.+ |.+++.+|..+.+.. -.+.+++...+.+.
T Consensus 64 tIVE~TSGNTGI~LA~vaa~~---Gy~~iivmP~~~S~er~~~l~a~---GAevi~t~~~~g~~~~a~~~a~el~~~~p~ 137 (300)
T COG0031 64 TIVEATSGNTGIALAMVAAAK---GYRLIIVMPETMSQERRKLLRAL---GAEVILTPGAPGNMKGAIERAKELAAEIPG 137 (300)
T ss_pred EEEEcCCChHHHHHHHHHHHc---CCcEEEEeCCCCCHHHHHHHHHc---CCEEEEcCCCCCchHHHHHHHHHHHHhCCC
Confidence 466677777888887776552 12234455555444444444444 999999997433211 13333334455555
Q ss_pred -EEEEecccCc
Q psy8850 139 -LVSVMLVNNE 148 (397)
Q Consensus 139 -~v~~~~~~~~ 148 (397)
++......||
T Consensus 138 ~~~~~~Qf~Np 148 (300)
T COG0031 138 YAVWLNQFENP 148 (300)
T ss_pred ceEchhhcCCC
Confidence 5554333333
No 478
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=43.56 E-value=2e+02 Score=27.63 Aligned_cols=94 Identities=14% Similarity=0.096 Sum_probs=52.2
Q ss_pred cEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCC-hhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcCCce
Q psy8850 60 EIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEH-KSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICSDTI 138 (397)
Q Consensus 60 ~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~-~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~ 138 (397)
.+.++.+|..++. +...+. +.|..|.+.+... .........+...|.++...... + . +..+..
T Consensus 7 ~v~iiG~g~~G~~-~A~~l~----~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~-----~--~----~~~~~d 70 (450)
T PRK14106 7 KVLVVGAGVSGLA-LAKFLK----KLGAKVILTDEKEEDQLKEALEELGELGIELVLGEYP-----E--E----FLEGVD 70 (450)
T ss_pred EEEEECCCHHHHH-HHHHHH----HCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcc-----h--h----HhhcCC
Confidence 5777787777774 444455 5777887776643 33322233343346554322211 1 1 112456
Q ss_pred EEEEecccCcccccccHHHHHHHHHhcCcEEEEeccc
Q psy8850 139 LVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCDAAQ 175 (397)
Q Consensus 139 ~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD~a~ 175 (397)
+|+++ +|.. +...+...|+++|++++-+...
T Consensus 71 ~vv~~-----~g~~-~~~~~~~~a~~~~i~~~~~~~~ 101 (450)
T PRK14106 71 LVVVS-----PGVP-LDSPPVVQAHKKGIEVIGEVEL 101 (450)
T ss_pred EEEEC-----CCCC-CCCHHHHHHHHCCCcEEeHHHH
Confidence 66653 3443 3344667789999999887554
No 479
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=43.54 E-value=1.6e+02 Score=23.07 Aligned_cols=53 Identities=15% Similarity=0.104 Sum_probs=33.9
Q ss_pred hhCCcEEEEeccCCCCCCCHHHHHHHh-cCCceEEEEecccCcccccccHHHHHHHHHhc
Q psy8850 107 ENDGFRVTYLKPKNNGLITLSQLEEKI-CSDTILVSVMLVNNEIGVIQPILEIGELCRSK 165 (397)
Q Consensus 107 ~~~g~~v~~v~~~~~~~~d~~~l~~~i-~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~ 165 (397)
...|++++.+..+ +.++++.+++ ..++.+|.++...+ .....++++.+.+++.
T Consensus 28 r~~G~eVi~LG~~----vp~e~i~~~a~~~~~d~V~lS~~~~--~~~~~~~~~~~~L~~~ 81 (137)
T PRK02261 28 TEAGFEVINLGVM----TSQEEFIDAAIETDADAILVSSLYG--HGEIDCRGLREKCIEA 81 (137)
T ss_pred HHCCCEEEECCCC----CCHHHHHHHHHHcCCCEEEEcCccc--cCHHHHHHHHHHHHhc
Confidence 3459999888765 4566666655 45788888876543 2233356666666666
No 480
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=43.50 E-value=1.5e+02 Score=22.96 Aligned_cols=59 Identities=15% Similarity=0.155 Sum_probs=37.4
Q ss_pred hhCCcEEEEeccCCCCCCCHHHH-HHHhcCCceEEEEecccCcccccccHHHHHHHHHhcC---cEEEE
Q psy8850 107 ENDGFRVTYLKPKNNGLITLSQL-EEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKG---VIFHC 171 (397)
Q Consensus 107 ~~~g~~v~~v~~~~~~~~d~~~l-~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~g---i~liv 171 (397)
...|++|.....+ .+++++ +++.+++..+|.++... +....-++++.+..++.| +.+++
T Consensus 27 ~~~GfeVi~lg~~----~s~e~~v~aa~e~~adii~iSsl~--~~~~~~~~~~~~~L~~~g~~~i~viv 89 (132)
T TIGR00640 27 ADLGFDVDVGPLF----QTPEEIARQAVEADVHVVGVSSLA--GGHLTLVPALRKELDKLGRPDILVVV 89 (132)
T ss_pred HhCCcEEEECCCC----CCHHHHHHHHHHcCCCEEEEcCch--hhhHHHHHHHHHHHHhcCCCCCEEEE
Confidence 3449998877655 344444 56667788899887664 333334677777777763 44554
No 481
>PLN02565 cysteine synthase
Probab=43.50 E-value=1.2e+02 Score=27.84 Aligned_cols=53 Identities=15% Similarity=0.068 Sum_probs=34.6
Q ss_pred EEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccC
Q psy8850 61 IIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPK 119 (397)
Q Consensus 61 i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~ 119 (397)
|+-.++|..|..++..+-.. +-+-.|++++..-......++.+ |.+++.++.+
T Consensus 70 vv~aSsGN~g~alA~~a~~~---G~~~~ivvp~~~~~~k~~~i~~~---GA~V~~~~~~ 122 (322)
T PLN02565 70 LIEPTSGNTGIGLAFMAAAK---GYKLIITMPASMSLERRIILLAF---GAELVLTDPA 122 (322)
T ss_pred EEEECCChHHHHHHHHHHHc---CCeEEEEeCCCCcHHHHHHHHHc---CCEEEEeCCC
Confidence 66677777776666554331 33466777777666666665555 9999987643
No 482
>PRK00014 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=43.45 E-value=52 Score=28.30 Aligned_cols=34 Identities=12% Similarity=0.062 Sum_probs=27.6
Q ss_pred CceEEEEecccCcccccccHHHHHHHHHhcCcEEE
Q psy8850 136 DTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFH 170 (397)
Q Consensus 136 ~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~li 170 (397)
.+..++.+ .-+..|.....+++.++|++||++++
T Consensus 172 ~P~~vicE-il~~dG~ma~~~~l~~fA~~~~l~ii 205 (230)
T PRK00014 172 RPAGVLCE-LMNADGTMMRGASLERYAAKEGLVAL 205 (230)
T ss_pred CceEEEEE-EeCCCCCccCHHHHHHHHHHcCCcEE
Confidence 45565555 56778999999999999999999884
No 483
>COG2121 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=43.23 E-value=1.2e+02 Score=25.65 Aligned_cols=82 Identities=22% Similarity=0.186 Sum_probs=50.5
Q ss_pred CCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHh---cCCceEEEEecccCcccccccH-HHHHHH
Q psy8850 86 GKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKI---CSDTILVSVMLVNNEIGVIQPI-LEIGEL 161 (397)
Q Consensus 86 g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i---~~~~~~v~~~~~~~~tG~~~~l-~~i~~l 161 (397)
.+.+++..+.-.+-.. ...+++.|..++.-..+.+| ..++.+++ ++.-.+++. +..|-|-+..+ +.+..+
T Consensus 68 ~~~~amvS~s~DGEli-A~~l~kfG~~~IRGSs~Kgg---~~Alr~l~k~Lk~G~~i~it--pDgPkGp~~~~~~Gii~L 141 (214)
T COG2121 68 KKIYAMVSPSRDGELI-ARLLEKFGLRVIRGSSNKGG---ISALRALLKALKQGKSIAIT--PDGPKGPVHKIGDGIIAL 141 (214)
T ss_pred CcEEEEEcCCcCHHHH-HHHHHHcCceEEeccCCcch---HHHHHHHHHHHhCCCcEEEc--CCCCCCCceeccchhhHh
Confidence 3444444444443332 34556679988877666655 45555554 444444333 66678877776 569999
Q ss_pred HHhcCcEEEEec
Q psy8850 162 CRSKGVIFHCDA 173 (397)
Q Consensus 162 ~~~~gi~livD~ 173 (397)
|++.|++++-=.
T Consensus 142 A~~sg~pi~pv~ 153 (214)
T COG2121 142 AQKSGVPIIPVG 153 (214)
T ss_pred hHhcCCCeEEEE
Confidence 999998776543
No 484
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=43.22 E-value=2.1e+02 Score=24.49 Aligned_cols=99 Identities=15% Similarity=0.203 Sum_probs=59.2
Q ss_pred cEEEeCChhHHHHHHHHHhHhhhccCCCEEE-----EcCCC-----ChhhHHHHHHHhhC-CcEEEEeccCCCCCCCHHH
Q psy8850 60 EIIWTSGATESNNLAIKGAAHFYKKRGKHII-----TVQTE-----HKSVLDSIRKLEND-GFRVTYLKPKNNGLITLSQ 128 (397)
Q Consensus 60 ~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl-----~~~~~-----~~s~~~~~~~~~~~-g~~v~~v~~~~~~~~d~~~ 128 (397)
-+.+-+||-..+.++..++. .|..|. .+... |.-+......+++. |+.+..........-..++
T Consensus 3 ~~aL~SGGKDS~~Al~~a~~-----~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~~~~g~~e~eve~ 77 (223)
T COG2102 3 VIALYSGGKDSFYALYLALE-----EGHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTFDTSGEEEREVEE 77 (223)
T ss_pred EEEEEecCcHHHHHHHHHHH-----cCCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEEecCccchhhHHH
Confidence 36778888888877777664 443332 22211 11233333444443 8888887776433335677
Q ss_pred HHHHhcC-CceEEEEecccCccccccc---HHHHHHHHHhcCcEEE
Q psy8850 129 LEEKICS-DTILVSVMLVNNEIGVIQP---ILEIGELCRSKGVIFH 170 (397)
Q Consensus 129 l~~~i~~-~~~~v~~~~~~~~tG~~~~---l~~i~~l~~~~gi~li 170 (397)
|.+++.+ +...|+ +|.+.+ .+.+..+|++.|+.++
T Consensus 78 L~~~l~~l~~d~iv-------~GaI~s~yqk~rve~lc~~lGl~~~ 116 (223)
T COG2102 78 LKEALRRLKVDGIV-------AGAIASEYQKERVERLCEELGLKVY 116 (223)
T ss_pred HHHHHHhCcccEEE-------EchhhhHHHHHHHHHHHHHhCCEEe
Confidence 7777765 323332 466666 5678999999998765
No 485
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=42.94 E-value=2.9e+02 Score=25.86 Aligned_cols=122 Identities=11% Similarity=0.058 Sum_probs=69.3
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEeCChhHHHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCC
Q psy8850 41 KAIEKARNEVAQLIYADPREIIWTSGATESNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKN 120 (397)
Q Consensus 41 ~~~~~~~~~la~~~~~~~~~i~~~~g~t~a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~ 120 (397)
+.+..+.+. ++-+|.+ ++.+.-....++.+... + |.+-++...- .+...+..+++.|. ++.+.
T Consensus 169 e~l~~L~~~-~~~~Gl~---~~t~v~d~~~~~~l~~~-v-------d~lkI~s~~~-~n~~LL~~~a~~gk-PVilk--- 231 (360)
T PRK12595 169 EGLKILKQV-ADEYGLA---VISEIVNPADVEVALDY-V-------DVIQIGARNM-QNFELLKAAGRVNK-PVLLK--- 231 (360)
T ss_pred HHHHHHHHH-HHHcCCC---EEEeeCCHHHHHHHHHh-C-------CeEEECcccc-cCHHHHHHHHccCC-cEEEe---
Confidence 444444433 5667776 55555555566666554 4 3333333222 22334444544443 33343
Q ss_pred CCC-CCHHHHHHHhc-----CCceEEEEe-ccc-Ccc--cccccHHHHHHHHHhcCcEEEEecccccCc
Q psy8850 121 NGL-ITLSQLEEKIC-----SDTILVSVM-LVN-NEI--GVIQPILEIGELCRSKGVIFHCDAAQAVGK 179 (397)
Q Consensus 121 ~~~-~d~~~l~~~i~-----~~~~~v~~~-~~~-~~t--G~~~~l~~i~~l~~~~gi~livD~a~~~~~ 179 (397)
+|. .++++++.+++ .+..+++.. ..+ +|+ -...++..|..+.+.++++|++|..|+.|.
T Consensus 232 ~G~~~t~~e~~~Ave~i~~~Gn~~i~L~erg~s~yp~~~~~~ldl~~i~~lk~~~~~PV~~d~~Hs~G~ 300 (360)
T PRK12595 232 RGLSATIEEFIYAAEYIMSQGNGQIILCERGIRTYEKATRNTLDISAVPILKQETHLPVMVDVTHSTGR 300 (360)
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCCEEEECCccCCCCCCCCCCcCHHHHHHHHHHhCCCEEEeCCCCCcc
Confidence 232 47888887764 244565554 222 232 233578899988888999999999999774
No 486
>cd01542 PBP1_TreR_like Ligand-binding domain of DNA transcription repressor specific for trehalose (TreR) which is a member of the LacI-GalR family of bacterial transcription regulators. Ligand-binding domain of DNA transcription repressor specific for trehalose (TreR) which is a member of the LacI-GalR family of bacterial transcription regulators. The ligand-binding domain of TreR is structurally homologous to the periplasmic sugar-binding domain of ABC-type transporters and both domains contain the type I periplasmic binding protein-like fold. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the type I periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding wh
Probab=42.82 E-value=1.3e+02 Score=25.88 Aligned_cols=68 Identities=12% Similarity=0.036 Sum_probs=37.0
Q ss_pred hhHHHHHH-HhhCCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEe
Q psy8850 98 SVLDSIRK-LENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCD 172 (397)
Q Consensus 98 s~~~~~~~-~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD 172 (397)
.....++. +...|.++...+.+.+-.-..+.+++++..+..++++..... + ..+.+.+++.|++++.=
T Consensus 16 ~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~i~~l~~~~~dgii~~~~~~------~-~~~~~~~~~~~ipvv~~ 84 (259)
T cd01542 16 RTVKGILAALYENGYQMLLMNTNFSIEKEIEALELLARQKVDGIILLATTI------T-DEHREAIKKLNVPVVVV 84 (259)
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHhcCCCEEEEeCCCC------C-HHHHHHHhcCCCCEEEE
Confidence 34444433 334488887765542221123456666677888887764321 1 34445566778765543
No 487
>cd00532 MGS-like MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase, which catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The family also includes the C-terminal domain in carbamoyl phosphate synthetase (CPS) where it catalyzes the last phosphorylation of a coaboxyphosphate intermediate to form the product carbamoyl phosphate and may also play a regulatory role. This family also includes inosine monophosphate cyclohydrolase. The known structures in this family show a common phosphate binding site.
Probab=42.75 E-value=1.4e+02 Score=22.25 Aligned_cols=81 Identities=14% Similarity=0.118 Sum_probs=46.7
Q ss_pred cCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCC-CCCCHHHHHHHhcC--CceEEEEec-ccCcccccccHHHHH
Q psy8850 84 KRGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNN-GLITLSQLEEKICS--DTILVSVML-VNNEIGVIQPILEIG 159 (397)
Q Consensus 84 ~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~-~~~d~~~l~~~i~~--~~~~v~~~~-~~~~tG~~~~l~~i~ 159 (397)
..|-+++.+. ++. ..+...|+.+..+..-.. + ++ .+.+.+.+ +..+|+... +.+......+-..|.
T Consensus 23 ~~G~~i~AT~----gTa---~~L~~~Gi~~~~v~~~~~~g--~~-~i~~~i~~~g~idlVIn~~~~~~~~~~~~dg~~iR 92 (112)
T cd00532 23 SDGFPLFATG----GTS---RVLADAGIPVRAVSKRHEDG--EP-TVDAAIAEKGKFDVVINLRDPRRDRCTDEDGTALL 92 (112)
T ss_pred HCCCEEEECc----HHH---HHHHHcCCceEEEEecCCCC--Cc-HHHHHHhCCCCEEEEEEcCCCCcccccCCChHHHH
Confidence 5678887554 233 333344888776643322 3 22 34444444 566665442 222112344567899
Q ss_pred HHHHhcCcEEEEecc
Q psy8850 160 ELCRSKGVIFHCDAA 174 (397)
Q Consensus 160 ~l~~~~gi~livD~a 174 (397)
+.|-+++++++.+..
T Consensus 93 R~A~~~~Ip~~T~~~ 107 (112)
T cd00532 93 RLARLYKIPVTTPNA 107 (112)
T ss_pred HHHHHcCCCEEECHH
Confidence 999999999998743
No 488
>PRK00910 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=42.66 E-value=55 Score=27.93 Aligned_cols=34 Identities=15% Similarity=0.044 Sum_probs=27.4
Q ss_pred CceEEEEecccCcccccccHHHHHHHHHhcCcEEE
Q psy8850 136 DTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFH 170 (397)
Q Consensus 136 ~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~li 170 (397)
.+..++.+ .-++.|.....+++.++|++||++++
T Consensus 168 ~p~~vicE-il~~dG~ma~~~~l~~fA~~h~l~~i 201 (218)
T PRK00910 168 QPAGVLCE-LTNPDGTMAKTPEIIAFGKLHNMPVL 201 (218)
T ss_pred CceEEEEE-EecCCCCcCCHHHHHHHHHHcCCcEE
Confidence 45565555 46678999999999999999999884
No 489
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=42.63 E-value=3e+02 Score=26.03 Aligned_cols=149 Identities=13% Similarity=0.121 Sum_probs=82.3
Q ss_pred HHHHHHHHHHHHHH-hCCCCCcEEEeCChhH---HHHHHHHHhHhhhccCCCEEEEcCCCChhhHHHHHHHhhCCcEEEE
Q psy8850 40 EKAIEKARNEVAQL-IYADPREIIWTSGATE---SNNLAIKGAAHFYKKRGKHIITVQTEHKSVLDSIRKLENDGFRVTY 115 (397)
Q Consensus 40 ~~~~~~~~~~la~~-~~~~~~~i~~~~g~t~---a~~~~l~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~ 115 (397)
++..+.+.+.+.++ .|.. .-.+..|.+. .++.-+..+. +. +..++....|.++...+..+...+.-+..
T Consensus 56 ~~~~~a~~~~~~~~g~g~~--gsR~i~G~~~~h~~LE~~lA~f~----g~-e~al~f~SGy~AN~~~i~~l~~~~dli~~ 128 (388)
T COG0156 56 PELIEAAKAAIRRYGVGAG--GSRLISGTSDLHVELEEELADFL----GA-EAALLFSSGFVANLGLLSALLKKGDLIFS 128 (388)
T ss_pred HHHHHHHHHHHHHhCCCCC--CcCcccCCcHHHHHHHHHHHHHh----CC-CcEEEEcccchhHHHHHHHhcCCCcEEEE
Confidence 34666677777775 3433 2333344443 3444455444 33 46666677899999998888665433322
Q ss_pred eccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHh---c---CcEEEEecccccCcc--cc----c
Q psy8850 116 LKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRS---K---GVIFHCDAAQAVGKI--DI----N 183 (397)
Q Consensus 116 v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~---~---gi~livD~a~~~~~~--~~----~ 183 (397)
=..+ + ..-++-.--.+.+.+.+.|. |++.+.++.++ . .++|++|.++++..- |+ +
T Consensus 129 D~ln---H--ASiidG~rls~a~~~~f~Hn--------D~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiApL~~l~~ 195 (388)
T COG0156 129 DELN---H--ASIIDGIRLSRAEVRRFKHN--------DLDHLEALLEEARENGARRKLIVTEGVFSMDGDIAPLPELVE 195 (388)
T ss_pred echh---h--hhHHHHHHhCCCcEEEecCC--------CHHHHHHHHHhhhccCCCceEEEEeccccCCCCcCCHHHHHH
Confidence 2222 1 12222222346677777763 56666666665 3 389999999985332 21 1
Q ss_pred c-CcccccEEEecccc--ccCCCCceEE
Q psy8850 184 I-QNYKVDLMSFSAHK--IYGPKGIGAL 208 (397)
Q Consensus 184 ~-~~~~~d~~~~s~~K--~~g~~g~g~~ 208 (397)
+ ..+++-+++--.|- .+|+.|-|++
T Consensus 196 L~~ky~a~L~VDEAHa~Gv~G~~GrG~~ 223 (388)
T COG0156 196 LAEKYGALLYVDEAHAVGVLGPNGRGLA 223 (388)
T ss_pred HHHHhCcEEEEEccccccccCCCCccHH
Confidence 1 12244455555566 5676665554
No 490
>cd06282 PBP1_GntR_like_2 Ligand-binding domain of putative DNA transcription repressors highly similar to that of the repressor specific for gluconate (GntR) which is a member of the LacI-GalR family of bacterial transcription regulators. This group includes the ligand-binding domain of putative DNA transcription repressors highly similar to that of the repressor specific for gluconate (GntR) which is a member of the LacI-GalR family of bacterial transcription regulators. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type I periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding
Probab=42.53 E-value=1.3e+02 Score=25.96 Aligned_cols=74 Identities=7% Similarity=0.052 Sum_probs=39.7
Q ss_pred CCChhhHHHHHHH-hhCCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEE-E
Q psy8850 94 TEHKSVLDSIRKL-ENDGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFH-C 171 (397)
Q Consensus 94 ~~~~s~~~~~~~~-~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~li-v 171 (397)
+.|......+... ...|.++...+.+.+..-..+.++.++..++.++++...+ +. . .+..+.+++.|++++ +
T Consensus 12 ~~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiii~~~~-~~----~-~~~~~~~~~~~ipvV~~ 85 (266)
T cd06282 12 PVFAECVQGIQEEARAAGYSLLLATTDYDAEREADAVETLLRQRVDGLILTVAD-AA----T-SPALDLLDAERVPYVLA 85 (266)
T ss_pred chHHHHHHHHHHHHHHCCCEEEEeeCCCCHHHHHHHHHHHHhcCCCEEEEecCC-CC----c-hHHHHHHhhCCCCEEEE
Confidence 3334444444433 3348888877654222112344555566778888775432 21 1 235566788898754 4
Q ss_pred ec
Q psy8850 172 DA 173 (397)
Q Consensus 172 D~ 173 (397)
|.
T Consensus 86 ~~ 87 (266)
T cd06282 86 YN 87 (266)
T ss_pred ec
Confidence 53
No 491
>cd03033 ArsC_15kD Arsenate Reductase (ArsC) family, 15kD protein subfamily; composed of proteins of unknown function with similarity to thioredoxin-fold arsenic reductases, ArsC. It is encoded by an ORF present in a gene cluster associated with nitrogen fixation that also encodes dinitrogenase reductase ADP-ribosyltransferase (DRAT) and dinitrogenase reductase activating glycohydrolase (DRAG). ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via glutaredoxin, through a single catalytic cysteine.
Probab=42.35 E-value=82 Score=23.72 Aligned_cols=48 Identities=15% Similarity=0.008 Sum_probs=39.0
Q ss_pred CEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHhcC
Q psy8850 87 KHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKICS 135 (397)
Q Consensus 87 ~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~ 135 (397)
|..++..+...+...+.+.+...|+.+..+.+..+. ++.++|++.+..
T Consensus 1 ~i~iy~~p~C~~crkA~~~L~~~gi~~~~~d~~~~p-~s~~eL~~~l~~ 48 (113)
T cd03033 1 DIIFYEKPGCANNARQKALLEAAGHEVEVRDLLTEP-WTAETLRPFFGD 48 (113)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCCcEEeehhcCC-CCHHHHHHHHHH
Confidence 356788889999999999998889999888886554 678888887764
No 492
>cd06300 PBP1_ABC_sugar_binding_like_1 Periplasmic sugar-binding component of uncharacterized ABC-type transport systems that are members of the pentose/hexose sugar-binding protein family of the type I periplasmic binding protein superfamily. Periplasmic sugar-binding component of uncharacterized ABC-type transport systems that are members of the pentose/hexose sugar-binding protein family of the type I periplasmic binding protein superfamily, which consists of two alpha/beta globular domains connected by a three-stranded hinge. This Venus flytrap-like domain undergoes transition from an open to a closed conformational state upon ligand binding. Members of this group are predicted to be involved in the transport of sugar-containing molecules across cellular and organellar membranes; however their substrate specificity is not known in detail.
Probab=42.35 E-value=1.1e+02 Score=26.65 Aligned_cols=41 Identities=7% Similarity=0.075 Sum_probs=26.4
Q ss_pred HHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEE
Q psy8850 126 LSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHC 171 (397)
Q Consensus 126 ~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~liv 171 (397)
.+.+++++.++..+|++..... ..+.+..+.+++.|++++.
T Consensus 50 ~~~~~~~~~~~vdgiIi~~~~~-----~~~~~~l~~~~~~~iPvv~ 90 (272)
T cd06300 50 IADIRNLIAQGVDAIIINPASP-----TALNPVIEEACEAGIPVVS 90 (272)
T ss_pred HHHHHHHHHcCCCEEEEeCCCh-----hhhHHHHHHHHHCCCeEEE
Confidence 4556666777888888865321 1234455667788998775
No 493
>cd01017 AdcA Metal binding protein AcdA. These proteins have been shown to function in the ABC uptake of Zn2+ and Mn2+ and in competence for genetic transformation and adhesion. The AcdA proteins belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and they bind their ligand in the cleft between these domains. In addition, many of these proteins have a low complexity region containing metal binding histidine-rich motif (repetitive HDH sequence).
Probab=42.22 E-value=1.9e+02 Score=25.82 Aligned_cols=73 Identities=18% Similarity=0.145 Sum_probs=44.9
Q ss_pred CCCEEEEcCCCChhhHHHHHHHhhCCcEEEEec-cCCCCCCCHHHHHHHhc----CCceEEEEecccCcccccccHHHHH
Q psy8850 85 RGKHIITVQTEHKSVLDSIRKLENDGFRVTYLK-PKNNGLITLSQLEEKIC----SDTILVSVMLVNNEIGVIQPILEIG 159 (397)
Q Consensus 85 ~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~-~~~~~~~d~~~l~~~i~----~~~~~v~~~~~~~~tG~~~~l~~i~ 159 (397)
++..+++. |+++....+.+ |+++..+. ...+..+.+.+|.+.++ .+.++|+.+...++ +.+.
T Consensus 170 ~~~~~v~~---H~af~Y~~~~~---gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~-------~~~~ 236 (282)
T cd01017 170 KGKTFVTQ---HAAFGYLARRY---GLKQIAIVGVSPEVEPSPKQLAELVEFVKKSDVKYIFFEENASS-------KIAE 236 (282)
T ss_pred CCCeEEEe---cccHHHHHHHC---CCeEEecccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCh-------HHHH
Confidence 34567764 44666666666 98877643 33444566666666553 36778877754332 4455
Q ss_pred HHHHhcCcEEE
Q psy8850 160 ELCRSKGVIFH 170 (397)
Q Consensus 160 ~l~~~~gi~li 170 (397)
.++++.|+.++
T Consensus 237 ~la~~~g~~v~ 247 (282)
T cd01017 237 TLAKETGAKLL 247 (282)
T ss_pred HHHHHcCCcEE
Confidence 57888888664
No 494
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=41.89 E-value=3.2e+02 Score=26.10 Aligned_cols=48 Identities=15% Similarity=0.229 Sum_probs=35.0
Q ss_pred CCHHHHHHHhcC-CceEEEEecccCcc--------ccccc----HHHHHHHHHhcCcEEEE
Q psy8850 124 ITLSQLEEKICS-DTILVSVMLVNNEI--------GVIQP----ILEIGELCRSKGVIFHC 171 (397)
Q Consensus 124 ~d~~~l~~~i~~-~~~~v~~~~~~~~t--------G~~~~----l~~i~~l~~~~gi~liv 171 (397)
.+++++.+.+.+ ++++++++++++.. |.+-- ..++.++||++|+.++.
T Consensus 155 t~~e~I~~~l~~~~p~lvVIDSIQT~~s~~~~SapGsVsQVRe~t~~L~~~AK~~~i~~fi 215 (456)
T COG1066 155 TNLEDIIAELEQEKPDLVVIDSIQTLYSEEITSAPGSVSQVREVAAELMRLAKTKNIAIFI 215 (456)
T ss_pred cCHHHHHHHHHhcCCCEEEEeccceeecccccCCCCcHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 478888888764 78999998887552 43222 35789999999987655
No 495
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=41.59 E-value=87 Score=24.27 Aligned_cols=63 Identities=16% Similarity=0.147 Sum_probs=41.1
Q ss_pred HhhCCcEEEEeccCCCCCCCHHHHH-HHhcCCceEEEEecccCcccccccHHHHHHHHHhcC---cEEEEecc
Q psy8850 106 LENDGFRVTYLKPKNNGLITLSQLE-EKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKG---VIFHCDAA 174 (397)
Q Consensus 106 ~~~~g~~v~~v~~~~~~~~d~~~l~-~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~g---i~livD~a 174 (397)
+...|++++....+ ..++.+- ++..+++.+|.++.-. |.....++++.+.+++.| +++++=.+
T Consensus 23 L~~~GfeVidLG~~----v~~e~~v~aa~~~~adiVglS~L~--t~~~~~~~~~~~~l~~~gl~~v~vivGG~ 89 (128)
T cd02072 23 FTEAGFNVVNLGVL----SPQEEFIDAAIETDADAILVSSLY--GHGEIDCKGLREKCDEAGLKDILLYVGGN 89 (128)
T ss_pred HHHCCCEEEECCCC----CCHHHHHHHHHHcCCCEEEEeccc--cCCHHHHHHHHHHHHHCCCCCCeEEEECC
Confidence 34459999888776 3455554 4556788899887763 333445688888888875 44555443
No 496
>PRK05595 replicative DNA helicase; Provisional
Probab=41.59 E-value=1.5e+02 Score=28.66 Aligned_cols=13 Identities=23% Similarity=0.330 Sum_probs=6.1
Q ss_pred CCEEEEcCCCChh
Q psy8850 86 GKHIITVQTEHKS 98 (397)
Q Consensus 86 g~~vl~~~~~~~s 98 (397)
|..|++...+-..
T Consensus 230 g~~vl~fSlEms~ 242 (444)
T PRK05595 230 GKSVAIFSLEMSK 242 (444)
T ss_pred CCcEEEEecCCCH
Confidence 4445544444433
No 497
>TIGR02634 xylF D-xylose ABC transporter, substrate-binding protein. Members of this family are periplasmic (when in Gram-negative bacteria) binding proteins for D-xylose import by a high-affinity ATP-binding cassette (ABC) transporter.
Probab=41.53 E-value=79 Score=28.42 Aligned_cols=73 Identities=15% Similarity=0.129 Sum_probs=40.9
Q ss_pred CChhhHHHHHHHhh-CCcEEEEeccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHHHHhcCcEEEEe
Q psy8850 95 EHKSVLDSIRKLEN-DGFRVTYLKPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGELCRSKGVIFHCD 172 (397)
Q Consensus 95 ~~~s~~~~~~~~~~-~g~~v~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l~~~~gi~livD 172 (397)
.+......++...+ .|..+...+.+.+-....+.++..+..++..|++..... .......+.+++.|++|+.=
T Consensus 12 ~~~~~~~~i~~~a~~~g~~v~~~~~~~~~~~q~~~i~~l~~~~vDgIIi~~~~~-----~~~~~~l~~~~~~~iPvV~~ 85 (302)
T TIGR02634 12 RWQKDRDIFVAAAESLGAKVFVQSANGNEAKQISQIENLIARGVDVLVIIPQNG-----QVLSNAVQEAKDEGIKVVAY 85 (302)
T ss_pred hHHHHHHHHHHHHHhcCCEEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEeCCCh-----hHHHHHHHHHHHCCCeEEEe
Confidence 33444444444333 388887665442221223556666778888888764321 11345556678889987654
No 498
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=41.41 E-value=23 Score=34.48 Aligned_cols=31 Identities=16% Similarity=0.256 Sum_probs=26.9
Q ss_pred ccCcccccccHHHHHHHHHhcCcEEEEeccc
Q psy8850 145 VNNEIGVIQPILEIGELCRSKGVIFHCDAAQ 175 (397)
Q Consensus 145 ~~~~tG~~~~l~~i~~l~~~~gi~livD~a~ 175 (397)
+...-|+..+++++++.||++|+.||+|.+.
T Consensus 73 id~~fGt~~dl~~Li~~~H~~Gi~vi~D~V~ 103 (479)
T PRK09441 73 VRTKYGTKEELLNAIDALHENGIKVYADVVL 103 (479)
T ss_pred cCcCcCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 3445788889999999999999999999874
No 499
>cd01018 ZntC Metal binding protein ZntC. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and bind their specific ligands in the cleft between these domains. In addition, many of these proteins possess a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=41.26 E-value=2.2e+02 Score=25.14 Aligned_cols=73 Identities=12% Similarity=0.062 Sum_probs=43.9
Q ss_pred CCCEEEEcCCCChhhHHHHHHHhhCCcEEEEeccCCCCCCCHHHHHHHh---c-CCceEEEEecccCcccccccHHHHHH
Q psy8850 85 RGKHIITVQTEHKSVLDSIRKLENDGFRVTYLKPKNNGLITLSQLEEKI---C-SDTILVSVMLVNNEIGVIQPILEIGE 160 (397)
Q Consensus 85 ~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i---~-~~~~~v~~~~~~~~tG~~~~l~~i~~ 160 (397)
++..+++ .|+++....+.+ |+++..+. .++..+.+.+|.+.+ + .+.++|+.+...++ +.+..
T Consensus 169 ~~~~~v~---~H~af~Y~~~~y---gl~~~~~~-~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~-------~~~~~ 234 (266)
T cd01018 169 KQRAFMV---YHPAWGYFARDY---GLTQIPIE-EEGKEPSPADLKRLIDLAKEKGVRVVFVQPQFST-------KSAEA 234 (266)
T ss_pred CCCeEEE---ECchhHHHHHHc---CCEEEecC-CCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCc-------HHHHH
Confidence 3455666 444666666666 99987653 234456565555544 4 36778877643322 34457
Q ss_pred HHHhcCcEEEE
Q psy8850 161 LCRSKGVIFHC 171 (397)
Q Consensus 161 l~~~~gi~liv 171 (397)
++++.|+.++.
T Consensus 235 la~~~g~~v~~ 245 (266)
T cd01018 235 IAREIGAKVVT 245 (266)
T ss_pred HHHHcCCeEEE
Confidence 78888987654
No 500
>PF00265 TK: Thymidine kinase; InterPro: IPR001267 Thymidine kinase (TK) (2.7.1.21 from EC) is an ubiquitous enzyme that catalyzes the ATP-dependent phosphorylation of thymidine. Two different families of Thymidine kinase have been identified [, ] and are represented in this entry; one groups together Thymidine kinase from herpesviruses, as well as cytosolic thymidylate kinases and the second family groups Thymidine kinase from various sources that include, vertebrates, bacteria, the Bacteriophage T4, poxviruses, African swine fever virus (ASFV) and Fish lymphocystis disease virus (FLDV). The major capsid protein of insect iridescent viruses also belongs to this family.; GO: 0004797 thymidine kinase activity, 0005524 ATP binding; PDB: 1XX6_B 2J9R_A 2J87_B 3E2I_A 2JA1_A 2UZ3_B 2B8T_B 2WVJ_A 1W4R_F 1XBT_F ....
Probab=40.93 E-value=42 Score=27.67 Aligned_cols=83 Identities=13% Similarity=0.218 Sum_probs=48.7
Q ss_pred cCCCEEEEcCCCChhhHHHHHHHhhCCcEEEEe--ccCCCCCCCHHHHHHHhcCCceEEEEecccCcccccccHHHHHHH
Q psy8850 84 KRGKHIITVQTEHKSVLDSIRKLENDGFRVTYL--KPKNNGLITLSQLEEKICSDTILVSVMLVNNEIGVIQPILEIGEL 161 (397)
Q Consensus 84 ~~g~~vl~~~~~~~s~~~~~~~~~~~g~~v~~v--~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~i~~l 161 (397)
..|.+|++..|....-...-....+.|.....+ +.+ ++.++.+.+..++.+|.+...+.-+ ..+.++.+.
T Consensus 27 ~~~~~v~~~kp~~D~R~~~~~I~s~~g~~~~~~~~~~~-----~~~~~~~~~~~~~dvI~IDEaQFf~---~~i~~l~~~ 98 (176)
T PF00265_consen 27 IAGKKVLVFKPAIDTRYGEDKIVSHDGISLEAIVDPID-----NLFEIIDILENDYDVIGIDEAQFFD---EQIVQLVEI 98 (176)
T ss_dssp HTT-EEEEEEESTSCCCCSSEEEHTTSCEEEEESSEES-----SGGGGGGGCCTTCSEEEESSGGGST---TTHHHHHHH
T ss_pred hCCCeEEEEEecccCcCCCCeEEecCCCcccccccchh-----hHHHHHHHhccCCCEEEEechHhhH---HHHHHHHHH
Confidence 455666665554332211100111226666666 222 4555666666678999999887654 457778888
Q ss_pred HHhcCcEEEEecc
Q psy8850 162 CRSKGVIFHCDAA 174 (397)
Q Consensus 162 ~~~~gi~livD~a 174 (397)
+.++|+.|++=+-
T Consensus 99 ~~~~g~~Vi~~GL 111 (176)
T PF00265_consen 99 LANKGIPVICAGL 111 (176)
T ss_dssp HHHTT-EEEEEEE
T ss_pred HHhCCCeEEEEee
Confidence 8899999988654
Done!