Query psy8852
Match_columns 634
No_of_seqs 499 out of 3425
Neff 9.1
Searched_HMMs 29240
Date Fri Aug 16 21:01:46 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8852.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8852hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b9q_A Chaperone protein DNAK; 100.0 8.6E-89 2.9E-93 758.1 58.3 499 133-634 2-519 (605)
2 2kho_A Heat shock protein 70; 100.0 6.8E-86 2.3E-90 734.8 51.6 497 134-633 3-518 (605)
3 1yuw_A Heat shock cognate 71 k 100.0 1.7E-84 5.9E-89 716.9 56.9 499 133-633 4-521 (554)
4 3d2f_A Heat shock protein homo 100.0 1.7E-82 5.8E-87 711.9 53.9 494 135-633 4-535 (675)
5 2v7y_A Chaperone protein DNAK; 100.0 1E-80 3.5E-85 681.8 56.9 475 134-633 3-487 (509)
6 4gni_A Putative heat shock pro 100.0 5.4E-60 1.8E-64 506.2 42.7 368 129-497 9-404 (409)
7 3i33_A Heat shock-related 70 k 100.0 1.3E-59 4.4E-64 502.7 42.4 365 131-496 21-403 (404)
8 3qfu_A 78 kDa glucose-regulate 100.0 3.2E-58 1.1E-62 490.6 43.3 363 132-495 17-394 (394)
9 1dkg_D Molecular chaperone DNA 100.0 3.3E-58 1.1E-62 488.2 39.4 361 134-494 3-382 (383)
10 1jce_A ROD shape-determining p 100.0 2.7E-41 9.3E-46 352.8 25.6 310 134-495 4-327 (344)
11 2fsj_A Hypothetical protein TA 100.0 7.4E-29 2.5E-33 257.5 14.5 229 234-492 93-343 (346)
12 3h1q_A Ethanolamine utilizatio 100.0 1.4E-26 4.9E-31 233.1 26.8 207 235-491 66-272 (272)
13 3hho_A CO-chaperone protein HS 99.9 1.4E-27 4.9E-32 220.0 12.2 110 2-111 4-113 (174)
14 1fpo_A HSC20, chaperone protei 99.9 2.5E-27 8.6E-32 217.5 11.6 110 2-111 1-110 (171)
15 3bvo_A CO-chaperone protein HS 99.9 2.8E-27 9.5E-32 223.4 11.4 108 2-109 43-150 (207)
16 2ych_A Competence protein PILM 99.9 4.1E-27 1.4E-31 248.6 12.2 315 133-492 13-373 (377)
17 4a2a_A Cell division protein F 99.9 1.7E-25 5.9E-30 237.1 24.5 199 274-493 167-393 (419)
18 3dqg_A Heat shock 70 kDa prote 99.9 6.3E-26 2.2E-30 203.7 16.4 129 506-634 2-130 (151)
19 3dob_A Heat shock 70 kDa prote 99.9 1.1E-25 3.6E-30 202.5 15.8 129 506-634 2-131 (152)
20 1k8k_A ARP3, actin-like protei 99.9 9.3E-26 3.2E-30 241.3 18.4 304 134-492 6-386 (418)
21 3h0x_A 78 kDa glucose-regulate 99.9 2.1E-25 7.1E-30 201.1 15.3 129 506-634 2-131 (152)
22 2fxu_A Alpha-actin-1, actin, a 99.9 1.4E-25 4.7E-30 236.2 14.9 299 134-492 6-348 (375)
23 3n8e_A Stress-70 protein, mito 99.9 2.5E-25 8.7E-30 205.6 14.7 134 501-634 17-150 (182)
24 4e81_A Chaperone protein DNAK; 99.9 3.1E-25 1.1E-29 212.3 15.8 130 505-634 2-131 (219)
25 3uo3_A J-type CO-chaperone JAC 99.9 5.9E-25 2E-29 202.9 6.8 103 1-112 10-123 (181)
26 2op6_A Heat shock 70 kDa prote 99.9 2.2E-23 7.4E-28 189.2 15.7 128 506-633 2-130 (152)
27 2zgy_A Plasmid segregation pro 99.9 1.7E-23 5.8E-28 215.4 10.9 226 235-491 73-319 (320)
28 1u00_A HSC66, chaperone protei 99.9 4.1E-22 1.4E-26 192.7 15.4 127 507-633 1-127 (227)
29 1q5l_A Chaperone protein DNAK; 99.9 5.6E-22 1.9E-26 174.9 11.3 121 502-622 15-135 (135)
30 1k8k_B ARP2, actin-like protei 99.8 4.5E-21 1.6E-25 202.8 0.4 298 135-492 8-363 (394)
31 2l6l_A DNAJ homolog subfamily 99.8 2.7E-21 9.4E-26 175.8 -1.5 98 1-102 9-107 (155)
32 3js6_A Uncharacterized PARM pr 99.7 4.3E-17 1.5E-21 168.9 20.2 203 262-495 114-338 (355)
33 4ehu_A Activator of 2-hydroxyi 99.7 8.7E-17 3E-21 161.8 20.2 177 287-494 69-255 (276)
34 1wjz_A 1700030A21RIK protein; 99.7 5E-18 1.7E-22 140.5 7.1 76 2-79 16-92 (94)
35 2lgw_A DNAJ homolog subfamily 99.7 3.7E-17 1.3E-21 135.6 7.5 69 1-75 1-69 (99)
36 2ej7_A HCG3 gene; HCG3 protein 99.7 6.2E-17 2.1E-21 130.2 7.6 69 1-75 8-76 (82)
37 2dmx_A DNAJ homolog subfamily 99.7 7.6E-17 2.6E-21 132.6 6.9 69 1-75 8-76 (92)
38 1hdj_A Human HSP40, HDJ-1; mol 99.7 1.7E-16 5.8E-21 125.9 8.0 65 2-74 3-67 (77)
39 2dn9_A DNAJ homolog subfamily 99.6 1.6E-16 5.5E-21 126.8 6.8 67 2-75 7-73 (79)
40 2yua_A Williams-beuren syndrom 99.6 1.3E-16 4.6E-21 132.8 6.5 69 2-77 17-85 (99)
41 2ctp_A DNAJ homolog subfamily 99.6 2.3E-16 7.8E-21 125.5 7.1 67 2-76 7-73 (78)
42 2qsa_A DNAJ homolog DNJ-2; J-d 99.6 2.5E-16 8.6E-21 133.8 6.4 72 2-76 15-86 (109)
43 3dwl_A Actin-related protein 3 99.6 8.3E-17 2.8E-21 170.6 4.1 304 135-492 7-395 (427)
44 2och_A Hypothetical protein DN 99.6 4E-16 1.4E-20 122.2 6.8 62 2-73 8-69 (73)
45 2cug_A Mkiaa0962 protein; DNAJ 99.6 4.9E-16 1.7E-20 126.4 7.3 67 2-76 17-83 (88)
46 2ctr_A DNAJ homolog subfamily 99.6 4.6E-16 1.6E-20 126.6 6.6 66 2-75 7-72 (88)
47 2ctq_A DNAJ homolog subfamily 99.6 6.2E-16 2.1E-20 131.8 7.3 67 2-75 20-86 (112)
48 3qb0_A Actin-related protein 4 99.6 5.6E-15 1.9E-19 158.0 16.5 304 135-492 25-470 (498)
49 4apw_A ALP12; actin-like prote 99.6 3.2E-16 1.1E-20 161.1 6.1 203 262-494 106-325 (329)
50 2ctw_A DNAJ homolog subfamily 99.6 1.8E-15 6.3E-20 128.1 7.5 65 2-73 17-81 (109)
51 2o37_A Protein SIS1; HSP40, J- 99.6 1.3E-15 4.3E-20 125.0 6.2 64 2-75 8-71 (92)
52 1bq0_A DNAJ, HSP40; chaperone, 99.6 9.8E-16 3.3E-20 128.7 4.5 67 2-75 3-69 (103)
53 2ys8_A RAB-related GTP-binding 99.5 2.4E-15 8.3E-20 122.6 4.0 60 2-69 27-86 (90)
54 1faf_A Large T antigen; J doma 99.5 5.5E-15 1.9E-19 117.0 2.9 60 3-71 12-71 (79)
55 1gh6_A Large T antigen; tumor 99.5 1.2E-15 4.2E-20 129.1 -1.1 64 2-74 8-71 (114)
56 3apq_A DNAJ homolog subfamily 99.5 2.5E-14 8.5E-19 137.6 6.3 68 1-75 1-68 (210)
57 1n4c_A Auxilin; four helix bun 99.5 1.3E-14 4.3E-19 132.2 2.9 66 2-71 117-182 (182)
58 2pf4_E Small T antigen; PP2A, 99.5 3.7E-15 1.3E-19 134.9 -1.0 64 2-74 11-74 (174)
59 3ag7_A Putative uncharacterize 99.4 4.6E-14 1.6E-18 117.9 3.9 62 2-66 41-104 (106)
60 1iur_A KIAA0730 protein; DNAJ 99.4 2.9E-14 1E-18 114.8 1.8 61 2-68 16-76 (88)
61 2qwo_B Putative tyrosine-prote 99.4 1.4E-13 4.8E-18 110.9 3.6 59 2-64 33-91 (92)
62 3lz8_A Putative chaperone DNAJ 99.4 4.3E-14 1.5E-18 143.3 0.0 66 1-74 27-92 (329)
63 4fo0_A Actin-related protein 8 99.4 2.1E-11 7E-16 136.1 21.2 117 263-392 200-321 (593)
64 2guz_A Mitochondrial import in 99.3 3E-13 1E-17 104.8 2.1 57 2-68 14-70 (71)
65 2d0o_A DIOL dehydratase-reacti 99.3 1.1E-12 3.7E-17 136.8 3.3 195 274-492 367-603 (610)
66 1nbw_A Glycerol dehydratase re 99.2 1.9E-12 6.3E-17 135.6 3.4 193 276-492 371-605 (607)
67 3apo_A DNAJ homolog subfamily 99.0 4.8E-11 1.6E-15 137.5 0.3 65 2-73 21-85 (780)
68 1hux_A Activator of (R)-2-hydr 98.8 2.8E-07 9.7E-12 91.4 20.9 172 291-494 76-257 (270)
69 2ews_A Pantothenate kinase; PA 98.4 2.6E-05 8.9E-10 77.1 19.6 75 412-491 207-286 (287)
70 2y4t_A DNAJ homolog subfamily 98.4 4.2E-07 1.4E-11 96.7 7.2 68 2-73 382-449 (450)
71 2guz_B Mitochondrial import in 98.1 1.3E-06 4.5E-11 65.1 3.6 53 4-65 6-59 (65)
72 4am6_A Actin-like protein ARP8 97.9 1.5E-05 5.2E-10 86.2 8.8 142 239-393 196-346 (655)
73 1t6c_A Exopolyphosphatase; alp 97.0 0.013 4.4E-07 59.0 15.7 79 276-359 99-178 (315)
74 2i7n_A Pantothenate kinase 1; 96.8 0.0033 1.1E-07 63.8 9.2 46 446-491 306-358 (360)
75 3vgl_A Glucokinase; ROK family 96.7 0.12 4.3E-06 51.9 20.4 43 287-331 96-139 (321)
76 2qm1_A Glucokinase; alpha-beta 96.7 0.26 8.9E-06 49.5 22.6 49 446-494 263-322 (326)
77 4db3_A Glcnac kinase, N-acetyl 96.7 0.35 1.2E-05 48.7 23.1 47 445-491 269-324 (327)
78 3r8e_A Hypothetical sugar kina 96.6 0.25 8.4E-06 49.7 21.6 48 445-492 260-318 (321)
79 2ivn_A O-sialoglycoprotein end 96.6 0.72 2.5E-05 46.5 28.4 65 425-494 229-299 (330)
80 3l0q_A Xylulose kinase; xlylul 96.5 0.0051 1.7E-07 67.3 8.6 84 411-498 408-494 (554)
81 3i8b_A Xylulose kinase; strain 96.4 0.0071 2.4E-07 65.4 8.6 80 413-497 395-475 (515)
82 3ezw_A Glycerol kinase; glycer 96.3 0.0089 3E-07 64.9 9.2 85 411-499 370-455 (526)
83 3hz6_A Xylulokinase; xylulose, 96.3 0.0087 3E-07 64.7 9.0 81 412-498 374-455 (511)
84 2itm_A Xylulose kinase, xylulo 96.3 0.0064 2.2E-07 65.3 7.7 82 413-498 357-439 (484)
85 4bc3_A Xylulose kinase; transf 96.3 0.0085 2.9E-07 65.2 8.7 77 419-496 408-484 (538)
86 3ll3_A Gluconate kinase; xylul 96.2 0.012 4.2E-07 63.4 9.8 82 413-499 364-446 (504)
87 2zf5_O Glycerol kinase; hypert 96.2 0.0092 3.2E-07 64.3 8.8 81 413-498 365-445 (497)
88 3ifr_A Carbohydrate kinase, FG 96.2 0.01 3.6E-07 64.0 8.8 81 413-498 371-452 (508)
89 3g25_A Glycerol kinase; IDP007 96.2 0.012 4.1E-07 63.5 9.2 83 413-499 374-457 (501)
90 3h3n_X Glycerol kinase; ATP-bi 96.0 0.015 5.2E-07 62.7 9.3 84 412-499 372-456 (506)
91 2e2o_A Hexokinase; acetate and 96.0 1.4 4.6E-05 43.5 23.5 48 445-493 239-287 (299)
92 2p3r_A Glycerol kinase; glycer 96.0 0.015 5.1E-07 62.8 8.7 82 413-498 371-453 (510)
93 3jvp_A Ribulokinase; PSI-II, N 95.9 0.012 4E-07 64.6 7.7 79 413-496 410-490 (572)
94 3cer_A Possible exopolyphospha 95.9 0.1 3.5E-06 53.0 13.8 77 278-358 106-191 (343)
95 2gup_A ROK family protein; sug 95.8 0.82 2.8E-05 45.0 20.2 49 445-493 227-287 (292)
96 3mdq_A Exopolyphosphatase; str 95.8 0.045 1.5E-06 55.0 10.7 77 277-358 92-170 (315)
97 4e1j_A Glycerol kinase; struct 95.7 0.02 6.9E-07 61.9 8.5 85 412-499 392-478 (520)
98 2d4w_A Glycerol kinase; alpha 95.7 0.029 9.8E-07 60.5 9.3 82 413-498 373-455 (504)
99 2dpn_A Glycerol kinase; thermu 95.6 0.023 7.9E-07 61.2 8.4 80 413-496 368-448 (495)
100 2hoe_A N-acetylglucosamine kin 95.6 0.63 2.1E-05 47.9 19.1 42 287-331 188-229 (380)
101 1u6z_A Exopolyphosphatase; alp 95.6 0.48 1.7E-05 50.8 18.6 172 278-468 100-309 (513)
102 2w40_A Glycerol kinase, putati 95.6 0.031 1.1E-06 60.2 9.2 82 413-498 376-459 (503)
103 3vov_A Glucokinase, hexokinase 95.5 1.1 3.7E-05 44.4 19.9 48 445-492 237-294 (302)
104 2uyt_A Rhamnulokinase; rhamnos 95.5 0.033 1.1E-06 59.9 9.0 77 411-493 361-439 (489)
105 2ap1_A Putative regulator prot 95.5 1.5 5E-05 44.0 20.9 43 287-331 120-163 (327)
106 4htl_A Beta-glucoside kinase; 95.3 2.1 7.3E-05 42.1 21.2 50 445-494 237-292 (297)
107 3eno_A Putative O-sialoglycopr 95.3 1 3.5E-05 45.3 18.8 68 424-496 233-306 (334)
108 1z6r_A MLC protein; transcript 95.0 1.2 4.2E-05 46.1 19.3 43 287-331 186-229 (406)
109 3hi0_A Putative exopolyphospha 94.5 0.23 7.8E-06 53.3 12.2 76 276-357 102-178 (508)
110 1z05_A Transcriptional regulat 94.1 3.3 0.00011 43.2 20.1 25 130-154 105-130 (429)
111 3htv_A D-allose kinase, alloki 93.8 2.3 7.8E-05 42.2 17.2 49 445-493 239-299 (310)
112 2ch5_A NAGK protein; transfera 93.0 8.1 0.00028 38.7 30.8 60 260-325 70-132 (347)
113 2yhw_A Bifunctional UDP-N-acet 92.8 8.7 0.0003 38.5 20.3 43 287-331 131-174 (343)
114 3h6e_A Carbohydrate kinase, FG 92.1 0.14 4.7E-06 54.7 5.5 72 418-494 362-436 (482)
115 2q2r_A Glucokinase 1, putative 91.2 12 0.00042 37.9 19.1 20 133-152 29-48 (373)
116 3bex_A Type III pantothenate k 90.0 3.5 0.00012 39.5 12.6 22 133-154 3-24 (249)
117 2e1z_A Propionate kinase; TDCD 86.9 25 0.00087 35.9 17.0 26 444-469 329-355 (415)
118 3zx3_A Ectonucleoside triphosp 86.7 10 0.00034 39.6 14.4 43 290-332 150-199 (452)
119 3o8m_A Hexokinase; rnaseh-like 84.0 17 0.00057 38.3 14.6 57 274-333 185-243 (485)
120 4g9i_A Hydrogenase maturation 81.7 2.9 9.8E-05 47.0 8.1 63 427-494 692-760 (772)
121 1g99_A Acetate kinase; alpha/b 81.6 25 0.00087 35.9 14.3 43 423-469 304-347 (408)
122 4bc3_A Xylulose kinase; transf 81.0 1.1 3.6E-05 48.6 4.2 27 128-154 5-32 (538)
123 3ifr_A Carbohydrate kinase, FG 78.8 1.4 4.9E-05 47.2 4.3 25 130-154 4-29 (508)
124 2yhx_A Hexokinase B; transfera 78.6 19 0.00065 37.6 12.8 56 275-333 164-221 (457)
125 3ttc_A HYPF, transcriptional r 77.6 5.4 0.00019 43.7 8.4 65 424-493 583-651 (657)
126 3ezw_A Glycerol kinase; glycer 77.6 1.4 4.8E-05 47.5 3.8 23 132-154 3-26 (526)
127 3qbx_A Anhydro-N-acetylmuramic 76.8 8.9 0.00031 38.7 9.1 69 424-495 265-338 (371)
128 3vth_A Hydrogenase maturation 75.8 6.1 0.00021 44.2 8.3 65 426-495 679-749 (761)
129 1sz2_A Glucokinase, glucose ki 75.4 66 0.0022 31.7 27.1 47 285-332 99-156 (332)
130 3l0q_A Xylulose kinase; xlylul 73.3 2.3 8E-05 46.0 4.2 23 132-154 4-27 (554)
131 3en9_A Glycoprotease, O-sialog 73.0 1E+02 0.0035 32.8 24.3 183 260-469 72-272 (540)
132 2iir_A Acetate kinase; transfe 71.3 58 0.002 33.1 13.6 43 424-470 305-348 (403)
133 3ll3_A Gluconate kinase; xylul 70.4 3 0.0001 44.6 4.2 23 132-154 3-26 (504)
134 2p3r_A Glycerol kinase; glycer 70.2 2.8 9.7E-05 44.8 3.9 23 132-154 2-25 (510)
135 3h3n_X Glycerol kinase; ATP-bi 69.3 3.4 0.00012 44.2 4.3 23 132-154 4-27 (506)
136 3cqy_A Anhydro-N-acetylmuramic 68.1 16 0.00056 36.8 8.7 72 419-494 267-343 (370)
137 3ven_A O-carbamoyltransferase 67.8 15 0.00052 39.4 8.9 79 414-497 280-361 (576)
138 1iv0_A Hypothetical protein; r 67.3 3.7 0.00013 33.0 3.1 19 135-153 3-21 (98)
139 3hz6_A Xylulokinase; xylulose, 67.2 3.4 0.00012 44.2 3.8 23 132-154 4-27 (511)
140 3h6e_A Carbohydrate kinase, FG 66.9 2.9 0.0001 44.3 3.1 23 132-154 5-28 (482)
141 2w40_A Glycerol kinase, putati 66.8 4 0.00014 43.5 4.2 22 133-154 4-26 (503)
142 3i8b_A Xylulose kinase; strain 66.7 4.2 0.00015 43.5 4.4 23 132-154 4-28 (515)
143 3g25_A Glycerol kinase; IDP007 65.4 3.9 0.00013 43.6 3.8 23 133-155 6-29 (501)
144 2dpn_A Glycerol kinase; thermu 64.6 3.8 0.00013 43.7 3.5 22 133-154 2-24 (495)
145 4e1j_A Glycerol kinase; struct 64.5 4.1 0.00014 43.7 3.8 22 133-154 26-48 (520)
146 4ijn_A Acetate kinase, acetoki 64.3 64 0.0022 32.7 12.1 44 422-469 304-348 (398)
147 2zf5_O Glycerol kinase; hypert 63.1 4.6 0.00016 43.0 3.8 22 133-154 3-25 (497)
148 1nu0_A Hypothetical protein YQ 61.9 6.2 0.00021 33.9 3.7 21 133-153 3-23 (138)
149 3aap_A Ectonucleoside triphosp 61.9 8.6 0.00029 38.8 5.4 42 291-332 110-158 (353)
150 1bdg_A Hexokinase; phosphotran 61.6 1.5E+02 0.0051 30.7 15.0 57 273-332 171-229 (451)
151 3khy_A Propionate kinase; csgi 59.5 1E+02 0.0035 31.1 12.5 25 445-469 313-338 (384)
152 3djc_A Type III pantothenate k 58.9 7.5 0.00026 37.5 4.1 22 133-154 2-23 (266)
153 2d4w_A Glycerol kinase; alpha 58.4 6.2 0.00021 42.1 3.8 22 133-154 2-24 (504)
154 3hm8_A Hexokinase-3; glucose, 58.4 1.5E+02 0.0051 30.6 14.0 54 274-331 160-216 (445)
155 3cet_A Conserved archaeal prot 57.7 7.4 0.00025 38.6 3.8 40 290-332 106-145 (334)
156 3jvp_A Ribulokinase; PSI-II, N 57.5 6.2 0.00021 42.8 3.7 23 132-154 4-28 (572)
157 2uyt_A Rhamnulokinase; rhamnos 57.4 6.5 0.00022 41.7 3.7 23 132-154 3-26 (489)
158 2itm_A Xylulose kinase, xylulo 56.2 6.5 0.00022 41.6 3.5 21 134-154 1-22 (484)
159 1cza_N Hexokinase type I; stru 55.4 54 0.0018 37.6 11.2 57 273-332 630-689 (917)
160 1vhx_A Putative holliday junct 55.1 7.4 0.00025 33.9 3.0 19 134-152 4-22 (150)
161 3cj1_A Ectonucleoside triphosp 52.4 17 0.00058 38.0 5.8 43 290-332 150-208 (456)
162 1hjr_A Holliday junction resol 52.3 18 0.00061 31.7 5.1 18 134-151 2-19 (158)
163 1zc6_A Probable N-acetylglucos 49.8 12 0.00042 36.6 4.1 63 421-492 228-292 (305)
164 3r9p_A ACKA; ssgcid, seattle s 49.4 1.9E+02 0.0066 29.1 12.7 44 422-469 295-339 (391)
165 2aa4_A Mannac kinase, putative 49.4 24 0.00082 34.0 6.2 47 446-492 234-287 (289)
166 1nbw_A Glycerol dehydratase re 49.0 8.8 0.0003 40.8 2.9 30 262-291 131-160 (607)
167 3o8m_A Hexokinase; rnaseh-like 48.2 46 0.0016 34.9 8.3 25 312-336 78-102 (485)
168 3f9m_A Glucokinase; hexokinase 47.4 1.7E+02 0.0057 30.5 12.3 55 274-332 184-241 (470)
169 3sk3_A Acetate kinase, acetoki 46.6 1.8E+02 0.006 29.7 12.1 139 312-469 217-364 (415)
170 1saz_A Probable butyrate kinas 46.1 43 0.0015 33.9 7.7 48 445-492 295-347 (381)
171 1zbs_A Hypothetical protein PG 45.5 16 0.00054 35.6 4.1 67 421-493 212-280 (291)
172 4ep4_A Crossover junction endo 45.5 24 0.00083 31.1 4.8 18 134-151 2-19 (166)
173 2yhx_A Hexokinase B; transfera 41.9 98 0.0033 32.2 9.6 26 312-337 59-84 (457)
174 3mcp_A Glucokinase; structural 41.6 25 0.00085 35.6 4.9 29 126-154 2-30 (366)
175 1zc6_A Probable N-acetylglucos 38.7 19 0.00067 35.1 3.5 56 262-325 77-133 (305)
176 2h3g_X Biosynthetic protein; p 38.6 25 0.00084 33.9 4.1 72 413-493 181-252 (268)
177 3f9m_A Glucokinase; hexokinase 38.1 90 0.0031 32.6 8.5 25 312-336 75-99 (470)
178 3epq_A Putative fructokinase; 37.1 21 0.00073 34.9 3.5 43 287-331 97-140 (302)
179 1msz_A DNA-binding protein smu 36.9 28 0.00095 27.0 3.3 28 264-291 34-61 (86)
180 1zbs_A Hypothetical protein PG 35.9 15 0.00051 35.7 2.2 60 260-325 59-120 (291)
181 1hnj_A Beta-ketoacyl-acyl carr 35.5 46 0.0016 32.5 5.7 50 420-472 212-261 (317)
182 1zxo_A Conserved hypothetical 35.3 15 0.00051 35.7 2.0 46 445-492 232-277 (291)
183 3epq_A Putative fructokinase; 34.3 84 0.0029 30.5 7.4 22 133-154 3-25 (302)
184 1xs0_A Inhibitor of vertebrate 32.9 21 0.00071 30.3 2.2 37 5-41 94-130 (136)
185 3zyy_X Iron-sulfur cluster bin 32.8 1.5E+02 0.005 32.2 9.4 97 314-460 206-304 (631)
186 2f9w_A Pantothenate kinase; CO 31.8 38 0.0013 32.6 4.2 23 132-154 22-45 (271)
187 4h0o_A Acetate kinase; askha ( 30.0 2.7E+02 0.0092 28.2 10.1 44 422-469 307-351 (404)
188 3zyy_X Iron-sulfur cluster bin 29.7 96 0.0033 33.7 7.3 63 407-470 497-560 (631)
189 1ub7_A 3-oxoacyl-[acyl-carrier 28.5 62 0.0021 31.6 5.3 47 422-471 216-262 (322)
190 2ebd_A 3-oxoacyl-[acyl-carrier 27.7 69 0.0024 31.0 5.5 46 423-471 207-252 (309)
191 1saz_A Probable butyrate kinas 27.6 57 0.0019 33.0 5.0 21 133-153 2-22 (381)
192 3cer_A Possible exopolyphospha 27.0 3.9E+02 0.013 26.3 10.9 75 312-398 14-90 (343)
193 3nuw_A 2-OXO-3-deoxygalactonat 26.6 52 0.0018 32.0 4.1 45 447-493 248-292 (295)
194 2d0o_A DIOL dehydratase-reacti 26.2 69 0.0024 34.0 5.2 31 260-290 127-157 (610)
195 4am6_A Actin-like protein ARP8 25.5 33 0.0011 37.2 2.7 48 423-470 476-525 (655)
196 1mzj_A Beta-ketoacylsynthase I 25.4 90 0.0031 30.7 5.9 46 423-471 228-273 (339)
197 3hm8_A Hexokinase-3; glucose, 24.8 1.7E+02 0.0057 30.2 7.8 30 312-342 57-86 (445)
198 1t6c_A Exopolyphosphatase; alp 24.7 3.7E+02 0.013 26.1 10.2 68 313-392 11-79 (315)
199 1bdg_A Hexokinase; phosphotran 24.2 1.8E+02 0.006 30.2 8.0 24 312-335 66-89 (451)
200 1zow_A 3-oxoacyl-[acyl-carrier 24.0 96 0.0033 30.0 5.8 48 421-471 207-254 (313)
201 3mdq_A Exopolyphosphatase; str 22.2 4.2E+02 0.014 25.6 10.0 30 314-343 4-33 (315)
202 3fcg_A F1 capsule-anchoring pr 21.2 2.5E+02 0.0085 21.8 6.3 55 551-619 27-81 (90)
203 3cet_A Conserved archaeal prot 20.6 1.2E+02 0.0042 29.9 5.5 39 134-172 1-44 (334)
No 1
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=100.00 E-value=8.6e-89 Score=758.11 Aligned_cols=499 Identities=41% Similarity=0.635 Sum_probs=471.8
Q ss_pred ceEEEEEeCCceEEEEEEECCeeEEEecCCCCccccEEEEEecCCcEEecHhHHhhhccCCCchhhhhhhhcCCCCCC--
Q psy8852 133 CVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPKNTISSIKRFIARDLKN-- 210 (634)
Q Consensus 133 ~~vvGID~GTt~s~va~~~~g~~~vi~~~~g~~~~Ps~v~~~~~~~~~~G~~A~~~~~~~~~~~i~~~k~~lg~~~~~-- 210 (634)
..+||||||||||++|++.+|.++++.|..|.+.+||+|+|.+++.++||..|..+...+|.++++++||+||+.+++
T Consensus 2 ~~viGIDlGTT~S~Va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~ 81 (605)
T 4b9q_A 2 GKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGCTLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEE 81 (605)
T ss_dssp CCEEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECCEEECTTSCEEESHHHHHTTTTCGGGEECCGGGTTTCBTTSHH
T ss_pred CcEEEEEcCCCcEEEEEEECCEEEEEECCCCCcccceEEEEeCCCcEEecHHHHHHHHhCCCcEehhhHHhhCCCCCCHH
Confidence 458999999999999999999999999999999999999998877899999999999999999999999999999887
Q ss_pred cccC--CCCeEEe-cCCCceEEEecCcccCHHhHHHHHHHHHHHHHHHHhCCCcCcEEEEeCCCCCHHHHHHHHHHHHHc
Q psy8852 211 INTN--SFPYDFQ-NKFGMLHIKTISGIKSPIEISAQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLA 287 (634)
Q Consensus 211 ~~~~--~~~~~i~-~~~~~~~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~viTVPa~~~~~qr~~l~~aa~~a 287 (634)
++.. .+||++. ..+|.+.+.+.++.++|+++++++|++|++.++.+++.++..+|||||++|++.||+++++|++.|
T Consensus 82 v~~~~~~~p~~~~~~~~g~~~~~~~~~~~~p~ei~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qr~a~~~Aa~~A 161 (605)
T 4b9q_A 82 VQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIA 161 (605)
T ss_dssp HHHHHTTCSSEEEECTTSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHHHT
T ss_pred HHHHhhcCCeEEEEcCCCceEEEECCEEECHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHHc
Confidence 3333 7899998 788889999988999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeeeecchhHHHHHhhhccCccceEEEEEEeCCCeEEEEEEEEeC----CeEEEEEEcCCCCccchhHHHHHHHHHH
Q psy8852 288 GLNVLRLLNEPTSAAIAYKLDKNIFEGIFAVYDLGGGTFDISILKFKN----GVFKVLSVGGDSNLGGDDFDYCLFSWIV 363 (634)
Q Consensus 288 Gl~~~~li~Ep~AAa~~y~~~~~~~~~~vlV~D~GggT~dvsv~~~~~----~~~~v~~~~~~~~lGG~~id~~l~~~l~ 363 (634)
||+++++++||+|||++|+......+..++|||+||||||+|++++.+ +.++++++.++.++||.+||..|++|+.
T Consensus 162 Gl~v~~li~EP~AAAlaygl~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~d~D~~l~~~l~ 241 (605)
T 4b9q_A 162 GLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLV 241 (605)
T ss_dssp TCEEEEEEEHHHHHHHHHHTTSCCSSEEEEEEEECSSCEEEEEEEEEESSSCEEEEEEEEEEETTCSHHHHHHHHHHHHH
T ss_pred CCceEEEeCcHHHHHHHhhhhccCCCCEEEEEECCCCeEEEEEEEEecCCCCceEEEEEecCCCCcChHHHHHHHHHHHH
Confidence 999999999999999999988765678999999999999999999988 8999999999999999999999999999
Q ss_pred HHHhhcc-----CCHHHHHHHHHHHHHHHHHhcCCcceEEEEEe-c----CCceeEEEEeHHHHHHHHHHHHHHHHHHHH
Q psy8852 364 KNAFLKK-----LSYKDVNILMIKSREIKELLSYQSSVKLNVKL-S----DKKIVNITIDMKQFFTITQHLVNRTILLSS 433 (634)
Q Consensus 364 ~~~~~~~-----~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~-~----~g~~~~~~itr~~~e~~~~~~~~~~~~~i~ 433 (634)
++|+... .+++.+.+|+.+||++|+.||....+.+.++. . ++.++.++|||++|++++.|+++++..+++
T Consensus 242 ~~f~~~~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~~~~i~~~~~~~~~~g~~~~~~~itr~~~e~l~~~~~~~i~~~v~ 321 (605)
T 4b9q_A 242 EEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLK 321 (605)
T ss_dssp HHHHHHTCCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEECSSSEEEEEEEEEHHHHHHHHHHHHHHTTHHHH
T ss_pred HHHhhhcCCCcccCHHHHHHHHHHHHHHHHhcCcCCCeEEEEeeeccCCCCCeeEEEEEeHHHHHHHHHHHHHHHHHHHH
Confidence 9987654 47899999999999999999999998888764 1 236788999999999999999999999999
Q ss_pred HHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhhccCCcCCCCChhhHHHHHHHHHHhHhcCCCCCCCceeEeeecccc
Q psy8852 434 KALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLLTSIDPDKAVVFGAAIQANFLSGNRGIDDNFLLLDVIPLS 513 (634)
Q Consensus 434 ~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~~~~~~~~~~~~~~~~~~~~~ 513 (634)
++|+.+++...+|+.|+||||+|++|+|++.|++.||.++..+.||++|||+|||++|+.+++..+ ++.+.|++|++
T Consensus 322 ~~L~~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~fg~~~~~~~nPdeaVA~GAai~a~~l~~~~~---~~~l~dv~p~s 398 (605)
T 4b9q_A 322 VALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVK---DVLLLDVTPLS 398 (605)
T ss_dssp HHHHHTTCCGGGCSEEEEESGGGGSHHHHHHHHHHHTSCCCSSSCTTTHHHHHHHHHHHHHHTSSC---SEEEECBCSSC
T ss_pred HHHHHcCCCHHHCcEEEEeCCccCchHHHHHHHHHhccCcCCCcChhHHHHHhHHHHHHHhcCCCC---ceEEEeeeeeE
Confidence 999999999999999999999999999999999999999999999999999999999999988644 89999999999
Q ss_pred ceEEEecceeeEEeeCCCccCcceeeeeEeeccCceEEEEEEEecCccccccCceeeEEEEeCCCCCCCCccEEEEEEEE
Q psy8852 514 LGIETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVKNCQVLANFELRDIPPMPAGRARIKVTYQV 593 (634)
Q Consensus 514 ~gi~~~~~~~~~li~~g~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~~~~~~~g~~~i~v~~~~ 593 (634)
|||++.+|.|.+||+||+++|+++++.|++..|+|+.+.|.+|||++....+|..||+|.|.++|+.|.|.++|+|+|++
T Consensus 399 lgie~~~g~~~~ii~rnt~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~i 478 (605)
T 4b9q_A 399 LGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDI 478 (605)
T ss_dssp EEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCSTTCCCEEEEEEE
T ss_pred EEEEEcCCEEEEEEeCCCcCCcceEEEeeeecccCceEEEEEEeccccccccCCEeeEEEEeCCCCCcCCCceEEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeeEEEEEEEecCCeEEEEEEecCCCCCHHHHHHhhhcC
Q psy8852 594 DADGLLSIFAYEKISGKKKFITIKPFYNMNLDEIKSNLKDK 634 (634)
Q Consensus 594 d~~g~l~v~~~~~~~g~~~~~~i~~~~~~~~~ei~~~~~~~ 634 (634)
|.||+|+|++.++.||++.+++|+++.+||++||++|++++
T Consensus 479 d~~gil~v~a~~~~tg~~~~i~i~~~~~ls~~ei~~~~~~~ 519 (605)
T 4b9q_A 479 DADGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRDA 519 (605)
T ss_dssp CTTSCEEEEEEETTTCCEECCEEESCCSCCHHHHHHHHHHH
T ss_pred cCCcEEEEEEEecCCCcEEEEEecCCCCCCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999863
No 2
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=100.00 E-value=6.8e-86 Score=734.76 Aligned_cols=497 Identities=42% Similarity=0.640 Sum_probs=463.2
Q ss_pred eEEEEEeCCceEEEEEEECCeeEEEecCCCCccccEEEEEecCCcEEecHhHHhhhccCCCchhhhhhhhcCCCCCCc--
Q psy8852 134 VSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPKNTISSIKRFIARDLKNI-- 211 (634)
Q Consensus 134 ~vvGID~GTt~s~va~~~~g~~~vi~~~~g~~~~Ps~v~~~~~~~~~~G~~A~~~~~~~~~~~i~~~k~~lg~~~~~~-- 211 (634)
.+||||||||||++|++.+|.++++.|+.|.+.+||+|+|.++++++||..|+.+...+|.++++++||+||+.+.+.
T Consensus 3 ~viGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~t~~~~Kr~iG~~~~d~~v 82 (605)
T 2kho_A 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEV 82 (605)
T ss_dssp -CEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECEEEECTTSCEEESHHHHTTTTTCGGGEEECGGGTTTCBSSSTTH
T ss_pred CEEEEEcCCcCEEEEEEECCEEEEEECCCCCcccceEEEEECCCcEEECHHHHHHhhhCCCCEeehhhHhhCCCCCcHHH
Confidence 479999999999999999999999999999999999999987778999999999999999999999999999988652
Q ss_pred ccC--CCCeEEe-cCCCceEEEecCcccCHHhHHHHHHHHHHHHHHHHhCCCcCcEEEEeCCCCCHHHHHHHHHHHHHcC
Q psy8852 212 NTN--SFPYDFQ-NKFGMLHIKTISGIKSPIEISAQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAG 288 (634)
Q Consensus 212 ~~~--~~~~~i~-~~~~~~~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~viTVPa~~~~~qr~~l~~aa~~aG 288 (634)
+.. .+||+++ ..+|.+.+.+.+..++|+++.+++|++|++.++.+++.++..+|||||++|++.||+++++|++.||
T Consensus 83 ~~~~~~~p~~~~~~~~g~~~i~~~g~~~~~~ei~a~~L~~l~~~ae~~l~~~v~~~VitVPa~f~d~qr~a~~~A~~~AG 162 (605)
T 2kho_A 83 QRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAG 162 (605)
T ss_dssp HHHHHHCSSCEEECTTSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHHHHTTT
T ss_pred HHHhhcCCeEEEECCCCceEEEECCEEEcHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEECCCCCHHHHHHHHHHHHHcC
Confidence 222 5789887 7788998888778899999999999999999999999999999999999999999999999999999
Q ss_pred CceeeeecchhHHHHHhhhccCccceEEEEEEeCCCeEEEEEEEEe----CCeEEEEEEcCCCCccchhHHHHHHHHHHH
Q psy8852 289 LNVLRLLNEPTSAAIAYKLDKNIFEGIFAVYDLGGGTFDISILKFK----NGVFKVLSVGGDSNLGGDDFDYCLFSWIVK 364 (634)
Q Consensus 289 l~~~~li~Ep~AAa~~y~~~~~~~~~~vlV~D~GggT~dvsv~~~~----~~~~~v~~~~~~~~lGG~~id~~l~~~l~~ 364 (634)
++++++++||+|||++|+......+..+||||+||||||+|++++. ++.++++++.|+.++||.+||+.|++|+.+
T Consensus 163 l~v~~li~EP~AAAlay~l~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~g~~~v~a~~gd~~lGG~d~D~~l~~~l~~ 242 (605)
T 2kho_A 163 LEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVE 242 (605)
T ss_dssp CEEEEEEEHHHHHHHHTTTTSSSSEEEEEEEEECSSCEEEEEEEEECTTTSCEEEEEEEEEESSCSGGGTHHHHHHHHHH
T ss_pred CceEEEecCHHHHHHHhhhcccCCCCEEEEEECCCCeEEEEEEEEEecCCCCeEEEEEECCCCCccHHHHHHHHHHHHHH
Confidence 9999999999999999998764367899999999999999999998 789999999999999999999999999999
Q ss_pred HHhhcc-----CCHHHHHHHHHHHHHHHHHhcCCcceEEEEEe-c---CC-ceeEEEEeHHHHHHHHHHHHHHHHHHHHH
Q psy8852 365 NAFLKK-----LSYKDVNILMIKSREIKELLSYQSSVKLNVKL-S---DK-KIVNITIDMKQFFTITQHLVNRTILLSSK 434 (634)
Q Consensus 365 ~~~~~~-----~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~-~---~g-~~~~~~itr~~~e~~~~~~~~~~~~~i~~ 434 (634)
+|+.+. .+++.+.+|+.+||++|+.||....+.+.++. . +| .++.++|||++|+++++|+++++..++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~~~i~~ 322 (605)
T 2kho_A 243 EFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKV 322 (605)
T ss_dssp HHHHHHSCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHTTCCSTTGGGTSHHHH
T ss_pred HHHHHhCCCcccCHHHHHHHHHHHHHHHHHcCCCCceEEEecccccCCCCceEEEEEEeHHHHHHHHHHHHHHHHHHHHH
Confidence 986543 46889999999999999999999888888773 2 23 46778999999999999999999999999
Q ss_pred HHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhhccCCcCCCCChhhHHHHHHHHHHhHhcCCCCCCCceeEeeeccccc
Q psy8852 435 ALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLLTSIDPDKAVVFGAAIQANFLSGNRGIDDNFLLLDVIPLSL 514 (634)
Q Consensus 435 ~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~~~~~~~~~~~~~~~~~~~~~~ 514 (634)
+|+.+++...+|+.|+||||+|++|+|++.|++.||.++..+.||++|||+|||++|+.+++.. +++.+.|++|++|
T Consensus 323 ~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~fg~~~~~~~npd~aVA~GAa~~a~~l~~~~---~~~~l~dv~p~sl 399 (605)
T 2kho_A 323 ALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDV---KDVLLLDVTPLSL 399 (605)
T ss_dssp HHHTTTCCTTTCSEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHHHHTTTTTSC---CCCCCSBCCCCCE
T ss_pred HHHHcCCChhhCceEEEECCcccChHHHHHHHHhcCCCcCcCCCcchHHHHHHHHHHHHhcCCc---cCceEEeeeeeec
Confidence 9999999989999999999999999999999999999888999999999999999999888753 4788999999999
Q ss_pred eEEEecceeeEEeeCCCccCcceeeeeEeeccCceEEEEEEEecCccccccCceeeEEEEeCCCCCCCCccEEEEEEEEC
Q psy8852 515 GIETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVKNCQVLANFELRDIPPMPAGRARIKVTYQVD 594 (634)
Q Consensus 515 gi~~~~~~~~~li~~g~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~~~~~~~g~~~i~v~~~~d 594 (634)
|+++.+|.|.+||+||+++|++++..|++..|+|+.+.|.+|+|++....+|..||+|.|.++|+.|.|.++|+|+|++|
T Consensus 400 gi~~~~g~~~~li~r~t~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id 479 (605)
T 2kho_A 400 GIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDID 479 (605)
T ss_dssp EEEETTTEEEEEECTTBCSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCSCCTTCSCEEEEEEEC
T ss_pred cccccCCceEEEEecccccCccceEEEEecCCCceEEEEEEEeccCcccccCcEEeEEEecCCCCCCCCCcEEEEEEEEc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeEEEEEEEecCCeEEEEEEecCCCCCHHHHHHhhhc
Q psy8852 595 ADGLLSIFAYEKISGKKKFITIKPFYNMNLDEIKSNLKD 633 (634)
Q Consensus 595 ~~g~l~v~~~~~~~g~~~~~~i~~~~~~~~~ei~~~~~~ 633 (634)
.+|+|+|++.++.+|++.+++|+++.+||++||++|+++
T Consensus 480 ~~gil~v~a~~~~tg~~~~i~i~~~~~ls~~~i~~~~~~ 518 (605)
T 2kho_A 480 ADGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRD 518 (605)
T ss_dssp TTSCEEEEEEETTTCCEEEEEECTTSSCCHHHHHHHHHH
T ss_pred CCCceeEEEEEcCCCceeecccccccCCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999976
No 3
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=100.00 E-value=1.7e-84 Score=716.94 Aligned_cols=499 Identities=38% Similarity=0.617 Sum_probs=460.5
Q ss_pred ceEEEEEeCCceEEEEEEECCeeEEEecCCCCccccEEEEEecCCcEEecHhHHhhhccCCCchhhhhhhhcCCCCCC--
Q psy8852 133 CVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPKNTISSIKRFIARDLKN-- 210 (634)
Q Consensus 133 ~~vvGID~GTt~s~va~~~~g~~~vi~~~~g~~~~Ps~v~~~~~~~~~~G~~A~~~~~~~~~~~i~~~k~~lg~~~~~-- 210 (634)
..+||||||||||++|++.+|.++++.++.|++.+||+|+|.++ .++||..|..+...+|.++++++||+||+.+.+
T Consensus 4 ~~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~-~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~ 82 (554)
T 1yuw_A 4 GPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAV 82 (554)
T ss_dssp CCCEEEEECSSEEEEEEECSSSEEECCCTTSCSEEECCEEECSS-CEEETHHHHTTTTTCGGGEECCGGGTTTCCSSCSH
T ss_pred CCEEEEEeCcccEEEEEEECCEEEEEECCCCCeecceEEEEcCC-cEEEcHHHHHhhhhChhhehHhhHHhcCCCCCcHH
Confidence 34799999999999999999999999999999999999999765 599999999999999999999999999999876
Q ss_pred cccC--CCCeEEecCCCceEEEec--C--cccCHHhHHHHHHHHHHHHHHHHhCCCcCcEEEEeCCCCCHHHHHHHHHHH
Q psy8852 211 INTN--SFPYDFQNKFGMLHIKTI--S--GIKSPIEISAQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAA 284 (634)
Q Consensus 211 ~~~~--~~~~~i~~~~~~~~~~~~--~--~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~viTVPa~~~~~qr~~l~~aa 284 (634)
++.. .+||.+...+|.+.+.+. + +.++|+++++++|++|++.++.+++.++..+|||||++|++.||+++++|+
T Consensus 83 v~~~~~~~p~~v~~~~g~~~~~v~~~~~~~~~sp~ei~a~~L~~lk~~ae~~lg~~v~~~VitVPa~f~~~qr~a~~~A~ 162 (554)
T 1yuw_A 83 VQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAG 162 (554)
T ss_dssp HHHHHTTCSSEEEEETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHHHH
T ss_pred HHHHhhcCCeEEEecCCceEEEEEECCCceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 2322 689999866777776642 3 579999999999999999999999999999999999999999999999999
Q ss_pred HHcCCceeeeecchhHHHHHhhhccCc-cceEEEEEEeCCCeEEEEEEEEeCCeEEEEEEcCCCCccchhHHHHHHHHHH
Q psy8852 285 KLAGLNVLRLLNEPTSAAIAYKLDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWIV 363 (634)
Q Consensus 285 ~~aGl~~~~li~Ep~AAa~~y~~~~~~-~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~ 363 (634)
+.||++++.+++||+|||++|+..... .+..++|||+||||||+|++++.++.++++++.++..+||++||+.|++|+.
T Consensus 163 ~~AGl~~~~li~EP~AAAlay~~~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l~ 242 (554)
T 1yuw_A 163 TIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIAAGIFEVKSTAGDTHLGGEDFDNRMVNHFI 242 (554)
T ss_dssp HTTTCEEEEEEEHHHHHHHHTTCSTTCSSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHH
T ss_pred HHcCCCeEEEeCcHHHHHHHHHhhccCCCCcEEEEEEcCCCeEEEEEEEEcCCcEEEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 999999999999999999999887642 4689999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcc-----CCHHHHHHHHHHHHHHHHHhcCCcceEEEEE-ecCCceeEEEEeHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8852 364 KNAFLKK-----LSYKDVNILMIKSREIKELLSYQSSVKLNVK-LSDKKIVNITIDMKQFFTITQHLVNRTILLSSKALM 437 (634)
Q Consensus 364 ~~~~~~~-----~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~-~~~g~~~~~~itr~~~e~~~~~~~~~~~~~i~~~l~ 437 (634)
++|+.+. .+++.+.+|+.+||++|+.||......+.++ +.+|.++...|+|++|+++++|+++++...++++|+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~i~~~~~g~~~~~~ltr~~~e~l~~~~~~~i~~~i~~~L~ 322 (554)
T 1yuw_A 243 AEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALR 322 (554)
T ss_dssp HHHHHHTSCCTTSCHHHHHHHHHHHHHHHHHHTTSSEEEEEETTCSSSCCEEEEEEHHHHHHHTHHHHHHTTHHHHHHHH
T ss_pred HHHHHHhCCCcccCHHHHHHHHHHHHHHhhhcccCceEEEEEeeccCCceEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9886543 4688999999999999999999988888776 357888999999999999999999999999999999
Q ss_pred HcCCCcCCCCeEEEEcCCcCcHHHHHHHHhhcc-CCcCCCCChhhHHHHHHHHHHhHhcCC--CCCCCceeEeeeccccc
Q psy8852 438 DANLTIKDINNVILVGGSTRMKHIHEGVSNFFK-TTLLTSIDPDKAVVFGAAIQANFLSGN--RGIDDNFLLLDVIPLSL 514 (634)
Q Consensus 438 ~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~-~~~~~~~~p~~ava~GAa~~a~~~~~~--~~~~~~~~~~~~~~~~~ 514 (634)
.+++...+|+.|+||||+|++|+|++.|++.|+ .++..+.||++|||+|||++|+.+++. .. .+++.+.|++|++|
T Consensus 323 ~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f~~~~v~~~~np~~aVA~Gaa~~a~~l~~~~~~~-~~~~~~~dv~p~sl 401 (554)
T 1yuw_A 323 DAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSEN-VQDLLLLDVTPLSL 401 (554)
T ss_dssp HTTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHTTSCCCCC-TTSSCCCCBCSSCE
T ss_pred HcCCChhhCcEEEEECCcccChHHHHHHHHHcCCCccccCCCchhHHHHHHHHHHHHhcCCcccc-ccceEEEEeeeeEE
Confidence 999998999999999999999999999999996 777788999999999999999998874 22 45788999999999
Q ss_pred eEEEecceeeEEeeCCCccCcceeeeeEeeccCceEEEEEEEecCccccccCceeeEEEEeCCCCCCCCccEEEEEEEEC
Q psy8852 515 GIETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVKNCQVLANFELRDIPPMPAGRARIKVTYQVD 594 (634)
Q Consensus 515 gi~~~~~~~~~li~~g~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~~~~~~~g~~~i~v~~~~d 594 (634)
|+++.++.+.+||+||++||+++++.|++..|+|+.+.|.+|||++....+|..||++.|.++|+.|.|.++|+|+|++|
T Consensus 402 gi~~~~g~~~~li~r~t~iP~~~~~~f~~~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id 481 (554)
T 1yuw_A 402 GIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDID 481 (554)
T ss_dssp EEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCSEEEEEEEESSSSBGGGSEEEEEEEEECCCCCSTTCCCEEEEEEEC
T ss_pred EEEecCceEEEEEECCCccCceeEEEeeeccCCCceEEEEEEecCccccccCcEEEEEEEeCCCCCcccccEEEEEEEEc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeEEEEEEEecCCeEEEEEEecC-CCCCHHHHHHhhhc
Q psy8852 595 ADGLLSIFAYEKISGKKKFITIKPF-YNMNLDEIKSNLKD 633 (634)
Q Consensus 595 ~~g~l~v~~~~~~~g~~~~~~i~~~-~~~~~~ei~~~~~~ 633 (634)
.+|+|+|++.++.+|++.+++|+++ .+||++||++|+++
T Consensus 482 ~~gil~v~a~~~~tg~~~~~~i~~~~~~ls~~~i~~~~~~ 521 (554)
T 1yuw_A 482 ANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQE 521 (554)
T ss_dssp TTCCEEEEEEETTTCCEEEEEECCCSSCSCHHHHHHHHHH
T ss_pred cCceEEEEEEeccCCCceeEEEecCCCCCCHHHHHHHHHH
Confidence 9999999999999999999999887 46999999999876
No 4
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=100.00 E-value=1.7e-82 Score=711.86 Aligned_cols=494 Identities=23% Similarity=0.343 Sum_probs=449.3
Q ss_pred EEEEEeCCceEEEEEEECCeeEEEecCCCCccccEEEEEecCCcEEecHhHHhhhccCCCchhhhhhhhcCCCCCCc--c
Q psy8852 135 SIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPKNTISSIKRFIARDLKNI--N 212 (634)
Q Consensus 135 vvGID~GTt~s~va~~~~g~~~vi~~~~g~~~~Ps~v~~~~~~~~~~G~~A~~~~~~~~~~~i~~~k~~lg~~~~~~--~ 212 (634)
+||||||||||++|++.+|.++++.|+.|++.+||+|+|.++ .++||..|..+...+|.++++++||+||+.+++. +
T Consensus 4 ~iGIDlGTtns~va~~~~g~~~ii~n~~g~r~tPS~Vaf~~~-~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~v~ 82 (675)
T 3d2f_A 4 PFGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPK-NRYLGETGKNKQTSNIKNTVANLKRIIGLDYHHPDFE 82 (675)
T ss_dssp CEEEECCSSEEEEEEEETTEEEEECCTTSCSSEECCEEECSS-SEEETHHHHHHHTTCGGGEECCHHHHTTCBTTCTTHH
T ss_pred EEEEEcCCCcEEEEEEECCeeEEEECCCCCcccceEEEECCC-cEEecHHHHHhhhhChHhHHHHHHHHhCCCCCcHHHH
Confidence 799999999999999999999999999999999999999765 5999999999999999999999999999998763 2
Q ss_pred cC--CCCeEEe-cCCCceEEEec--C--cccCHHhHHHHHHHHHHHHHHHHhCCCcCcEEEEeCCCCCHHHHHHHHHHHH
Q psy8852 213 TN--SFPYDFQ-NKFGMLHIKTI--S--GIKSPIEISAQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAK 285 (634)
Q Consensus 213 ~~--~~~~~i~-~~~~~~~~~~~--~--~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~viTVPa~~~~~qr~~l~~aa~ 285 (634)
.. ++||+++ ..+|.+.+.+. + ..++|+++++++|++|++.++.+++.++..+|||||++|++.||+++++|++
T Consensus 83 ~~~~~~p~~v~~~~~g~~~~~~~~~g~~~~~speei~a~~L~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~Aa~ 162 (675)
T 3d2f_A 83 QESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAAR 162 (675)
T ss_dssp HHHTTCCSEEEECTTSBEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHHHH
T ss_pred HHHhhCCeeEEEcCCCceEEEEEeCCCCceEcHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHHHHHH
Confidence 22 7899988 56788877653 3 4799999999999999999999999999999999999999999999999999
Q ss_pred HcCCceeeeecchhHHHHHhhhccC------ccceEEEEEEeCCCeEEEEEEEEeCCeEEEEEEcCCCCccchhHHHHHH
Q psy8852 286 LAGLNVLRLLNEPTSAAIAYKLDKN------IFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLF 359 (634)
Q Consensus 286 ~aGl~~~~li~Ep~AAa~~y~~~~~------~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~id~~l~ 359 (634)
.||++++++++||+|||++|+.... ..+.++||||+||||||+|++++.++.++++++.++..+||++||+.|+
T Consensus 163 ~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~~g~~~V~a~~gd~~lGG~d~D~~l~ 242 (675)
T 3d2f_A 163 IAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLAIT 242 (675)
T ss_dssp HTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHH
T ss_pred HcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEecCCeEEEEEEcCCCCccHHHHHHHHH
Confidence 9999999999999999999987652 2568899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcc-----CCHHHHHHHHHHHHHHHHHhcCCcceEEEEE-ecCCceeEEEEeHHHHHHHHHHHHHHHHHHHH
Q psy8852 360 SWIVKNAFLKK-----LSYKDVNILMIKSREIKELLSYQSSVKLNVK-LSDKKIVNITIDMKQFFTITQHLVNRTILLSS 433 (634)
Q Consensus 360 ~~l~~~~~~~~-----~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~-~~~g~~~~~~itr~~~e~~~~~~~~~~~~~i~ 433 (634)
+|+.++|+... .+++.+.+|+.+||++|+.||....+.+.++ +.+|.++.++|||++|++++.|+++++..+++
T Consensus 243 ~~l~~~f~~~~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~~~~i~i~~~~~g~~~~~~itr~~fe~l~~~l~~~i~~~i~ 322 (675)
T 3d2f_A 243 EHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSVESVMNDVDVSSQLSREELEELVKPLLERVTEPVT 322 (675)
T ss_dssp HHHHHHHHHHTSCCGGGCHHHHHHHHHHHHHHHHHHHHCSEEEEEETTSSSSCCEEEEEEHHHHHHHTHHHHTTTTHHHH
T ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhcCcCCceEEEEeeeccCceEEEEEeHHHHHHHHHHHHHHHHHHHH
Confidence 99999886543 4688999999999999999999887777776 35678899999999999999999999999999
Q ss_pred HHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhhccCCcCCCCChhhHHHHHHHHHHhHhcCCCCCCCceeEeeecccc
Q psy8852 434 KALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLLTSIDPDKAVVFGAAIQANFLSGNRGIDDNFLLLDVIPLS 513 (634)
Q Consensus 434 ~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~~~~~~~~~~~~~~~~~~~~~ 513 (634)
++|+.++++..+|+.|+||||+|++|+|++.|++.||.++..+.||++|||+|||++|+.+++.+. .+++.+.|++|++
T Consensus 323 ~~L~~a~l~~~~I~~VvLvGGssriP~v~~~l~~~fg~~~~~~~nPdeaVA~GAa~~a~~ls~~~~-v~~~~l~Dv~p~s 401 (675)
T 3d2f_A 323 KALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFGKPLSTTLNQDEAIAKGAAFICAIHSPTLR-VRPFKFEDIHPYS 401 (675)
T ss_dssp HHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHHTSCEECCSCTTTHHHHHHHHHHHHTCSSCC-CCCCEEEEEECSC
T ss_pred HHHHHhCCChhhCcEEEEECCCccChHHHHHHHHhcCCCccccCCcchHHHHHHHHHHHHhCCCCc-ccceEEEeeeecc
Confidence 999999999899999999999999999999999999998888999999999999999999998765 5689999999999
Q ss_pred ceEEEecc----eeeEEeeCCCccCcceeeeeEeeccCceEEEEEEEecCccccc-cCceeeEEEEeCCCCCCCCcc-EE
Q psy8852 514 LGIETIGG----LVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVK-NCQVLANFELRDIPPMPAGRA-RI 587 (634)
Q Consensus 514 ~gi~~~~~----~~~~li~~g~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~-~~~~lg~~~l~~~~~~~~g~~-~i 587 (634)
|||++.++ .+.+||+||+++|++++..|++..+++ +.+. |+|++..+. +|..||+|.|.++|+.|.|.+ +|
T Consensus 402 lgi~~~~~~~~~~~~~li~rnt~iP~~k~~~f~~~~~~~--~~~~-~~ge~~~~~~~n~~lg~f~l~gi~~~~~g~~~~i 478 (675)
T 3d2f_A 402 VSYSWDKQVEDEDHMEVFPAGSSFPSTKLITLNRTGDFS--MAAS-YTDITQLPPNTPEQIANWEITGVQLPEGQDSVPV 478 (675)
T ss_dssp EEEEECCTTCSCSEEEEECTTEEESEEEEEEEEESSCEE--EEEE-ESCGGGSCTTCCSEEEEEEEECCCCCSSCSCEEE
T ss_pred eEeeecCCCCCcceEEEEcCCCCCCcccceeeeecCCce--EEEE-EcCCcccccccCceeeEEEecCcCCCCCCCcceE
Confidence 99999877 499999999999999999998765443 4333 789988887 899999999999999999974 99
Q ss_pred EEEEEECCCeeEEEEEE----------EecCCeEEEEEEecCC-CCCHHHHHHhhhc
Q psy8852 588 KVTYQVDADGLLSIFAY----------EKISGKKKFITIKPFY-NMNLDEIKSNLKD 633 (634)
Q Consensus 588 ~v~~~~d~~g~l~v~~~----------~~~~g~~~~~~i~~~~-~~~~~ei~~~~~~ 633 (634)
+|+|++|.+|+|+|++. ++.+|++.+++|+++. +||++||++|+++
T Consensus 479 ~v~f~id~~Gil~V~a~~~~~~~~~~~~~~t~~~~~i~i~~~~~~ls~~ei~~~~~~ 535 (675)
T 3d2f_A 479 KLKLRCDPSGLHTIEEAYTIEDIEAGSDTKTVKKDDLTIVAHTFGLDAKKLNELIEK 535 (675)
T ss_dssp EEEEEECTTSCEEEEEEEEECC------CCCCEEEECEEEEECSSCCHHHHHHHHHH
T ss_pred EEEEEEcCCCcEEEEEEEEeecccccccccCcceeeEEEecCCCCCCHHHHHHHHHH
Confidence 99999999999999996 7889999999998865 8999999999876
No 5
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=100.00 E-value=1e-80 Score=681.78 Aligned_cols=475 Identities=42% Similarity=0.626 Sum_probs=441.6
Q ss_pred eEEEEEeCCceEEEEEEECCeeEEEecCCCCccccEEEEEecCCcEEecHhHHhhhccCCCchhhhhhhhcCCCCCCccc
Q psy8852 134 VSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPKNTISSIKRFIARDLKNINT 213 (634)
Q Consensus 134 ~vvGID~GTt~s~va~~~~g~~~vi~~~~g~~~~Ps~v~~~~~~~~~~G~~A~~~~~~~~~~~i~~~k~~lg~~~~~~~~ 213 (634)
.+||||||||||++|++.+|.|+++.++.|.+.+||+|+| .+++++||.+|......+| ++++++|++||+++.
T Consensus 3 ~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~-~~~~~~vG~~A~~~~~~~p-~~~~~~Kr~lg~p~~---- 76 (509)
T 2v7y_A 3 KIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAF-KNGERLVGEVAKRQAITNP-NTIISIKRHMGTDYK---- 76 (509)
T ss_dssp CEEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECEEEE-SSSSEEESHHHHTTTTTCS-SEEECGGGTTTSCCC----
T ss_pred CEEEEEcCCceEEEEEEECCEEEEEECCCCCcccceEEEE-CCCcEEECHHHHHhHHhCC-CcHHHHHHhcCCCcE----
Confidence 4799999999999999999999999999999999999999 4567999999999988899 999999999998532
Q ss_pred CCCCeEEecCCCceEEEecCcccCHHhHHHHHHHHHHHHHHHHhCCCcCcEEEEeCCCCCHHHHHHHHHHHHHcCCceee
Q psy8852 214 NSFPYDFQNKFGMLHIKTISGIKSPIEISAQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLR 293 (634)
Q Consensus 214 ~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~viTVPa~~~~~qr~~l~~aa~~aGl~~~~ 293 (634)
+.+++..++|+++.+++|++|+..++.+++.++..+|||||++|++.||+++++|++.||++++.
T Consensus 77 ---------------~~~~g~~~~~~ei~a~~L~~l~~~ae~~l~~~~~~~VitvPa~~~~~qr~a~~~a~~~AGl~~~~ 141 (509)
T 2v7y_A 77 ---------------VEIEGKQYTPQEISAIILQYLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDAGRIAGLEVER 141 (509)
T ss_dssp ---------------EEETTEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEE
T ss_pred ---------------EEECCEEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHHcCCCeEE
Confidence 11234578999999999999999999999999999999999999999999999999999999999
Q ss_pred eecchhHHHHHhhhccCccceEEEEEEeCCCeEEEEEEEEeCCeEEEEEEcCCCCccchhHHHHHHHHHHHHHhhcc---
Q psy8852 294 LLNEPTSAAIAYKLDKNIFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWIVKNAFLKK--- 370 (634)
Q Consensus 294 li~Ep~AAa~~y~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~--- 370 (634)
+++||+|||++|+.... .+.+++|||+||||||++++++.++.++++++.++..+||.+||+.|++|+.++|+.+.
T Consensus 142 li~Ep~AAAlay~~~~~-~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l~~~~~~~~~~~ 220 (509)
T 2v7y_A 142 IINEPTAAALAYGLDKE-EDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLVNQFKQEHGID 220 (509)
T ss_dssp EEEHHHHHHHHTTGGGS-CSEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred EecCHHHHHHHHhhccC-CCCEEEEEECCCCeEEEEEEEEcCCeEEEEEecCCCCcCHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999999998765 77899999999999999999999999999999999999999999999999999986543
Q ss_pred --CCHHHHHHHHHHHHHHHHHhcCCcceEEEEEe-c---CC-ceeEEEEeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCc
Q psy8852 371 --LSYKDVNILMIKSREIKELLSYQSSVKLNVKL-S---DK-KIVNITIDMKQFFTITQHLVNRTILLSSKALMDANLTI 443 (634)
Q Consensus 371 --~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~-~---~g-~~~~~~itr~~~e~~~~~~~~~~~~~i~~~l~~~~~~~ 443 (634)
.+++.+.+|+.+||++|+.||......+.++. . +| .++.++|+|++|+++++|+++++...++++|+.+++..
T Consensus 221 ~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~~~i~~~L~~a~~~~ 300 (509)
T 2v7y_A 221 LSKDKMALQRLKDAAEKAKKELSGVTQTQISLPFISANENGPLHLEMTLTRAKFEELSAHLVERTMGPVRQALQDAGLTP 300 (509)
T ss_dssp GGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHTHHHHHTTHHHHHHHHHHHTCCG
T ss_pred cccCHHHHHHHHHHHHHHHHhcCCCCcEEEEEeccccCCCCCeeEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHcCCCh
Confidence 46788999999999999999999888888763 2 23 45778999999999999999999999999999999988
Q ss_pred CCCCeEEEEcCCcCcHHHHHHHHhhccCCcCCCCChhhHHHHHHHHHHhHhcCCCCCCCceeEeeeccccceEEEeccee
Q psy8852 444 KDINNVILVGGSTRMKHIHEGVSNFFKTTLLTSIDPDKAVVFGAAIQANFLSGNRGIDDNFLLLDVIPLSLGIETIGGLV 523 (634)
Q Consensus 444 ~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~ 523 (634)
.+|+.|+|+||+|++|+|++.|++.||.++..+.||++|||+|||++|+.+++.. +++.+.|++|++||+++.++.+
T Consensus 301 ~~i~~VvLvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~aVa~Gaa~~a~~l~~~~---~~~~~~dv~p~slgi~~~~~~~ 377 (509)
T 2v7y_A 301 ADIDKVILVGGSTRIPAVQEAIKRELGKEPHKGVNPDEVVAIGAAIQGGVIAGEV---KDVVLLDVTPLSLGIETMGGVF 377 (509)
T ss_dssp GGCSEEEEESGGGGCHHHHHHHHHHHSSCCBCCSCTTTHHHHHHHHHHHHHHTCC---CCCCCCCBCSSEEEEEETTTEE
T ss_pred hHCcEEEEECCcccChHHHHHHHHHhCCCcCcCCCchhhhHhhHHHHHHHhcCCc---cCceEEEeeccccceeecCCce
Confidence 8999999999999999999999999998888899999999999999999988753 4788999999999999999999
Q ss_pred eEEeeCCCccCcceeeeeEeeccCceEEEEEEEecCccccccCceeeEEEEeCCCCCCCCccEEEEEEEECCCeeEEEEE
Q psy8852 524 EKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVKNCQVLANFELRDIPPMPAGRARIKVTYQVDADGLLSIFA 603 (634)
Q Consensus 524 ~~li~~g~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~~~~~~~g~~~i~v~~~~d~~g~l~v~~ 603 (634)
.+||+||+++|++++..|++..|+|+.+.|.+|+|++....+|..||++.|.++|+.|.|.++|+|+|++|.+|+|+|++
T Consensus 378 ~~li~~~~~iP~~~~~~f~~~~d~q~~~~i~v~~ge~~~~~~~~~lg~~~l~~i~~~~~g~~~i~v~f~id~~gil~v~a 457 (509)
T 2v7y_A 378 TKLIERNTTIPTSKSQVFTTAADNQTTVDIHVLQGERPMAADNKSLGRFQLTGIPPAPRGVPQIEVTFDIDANGIVHVRA 457 (509)
T ss_dssp EEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEEESSSBGGGSEEEEEEEEECCCCCCTTCSCEEEEEEECTTSCEEEEE
T ss_pred EEEEeCCCcCCcceEEEEEeeccCcEEEEEEEEecCccccccCcEEEEEEEeCCCCCCCcccEEEEEEEEcCCceEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCeEEEEEEecCCCCCHHHHHHhhhc
Q psy8852 604 YEKISGKKKFITIKPFYNMNLDEIKSNLKD 633 (634)
Q Consensus 604 ~~~~~g~~~~~~i~~~~~~~~~ei~~~~~~ 633 (634)
.++.+|++.+++|+++.+||++||++|+++
T Consensus 458 ~~~~~g~~~~~~i~~~~~l~~~~i~~~~~~ 487 (509)
T 2v7y_A 458 KDLGTNKEQSITIKSSSGLSEEEIQRMIKE 487 (509)
T ss_dssp EETTTCCEEEEEECSSCSCCSHHHHHHHHH
T ss_pred EEcCCCcEEEEEEEecCCCCHHHHHHHHHH
Confidence 999999999999999999999999999886
No 6
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=100.00 E-value=5.4e-60 Score=506.16 Aligned_cols=368 Identities=26% Similarity=0.389 Sum_probs=329.5
Q ss_pred cCCCceEEEEEeCCceEEEEEEECCeeEEEecCCCCccccEEEEEecCCcEEecHhHHhhhccCCCchhhhhhhhcCCCC
Q psy8852 129 VKNKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPKNTISSIKRFIARDL 208 (634)
Q Consensus 129 ~p~~~~vvGID~GTt~s~va~~~~g~~~vi~~~~g~~~~Ps~v~~~~~~~~~~G~~A~~~~~~~~~~~i~~~k~~lg~~~ 208 (634)
.|.++.+||||||||||++|++.+|.++++.++.|.+.+||+|+|.+ +.++||..|......+|.++++++|+++|+.+
T Consensus 9 ~~m~~~vvGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~-~~~~~G~~A~~~~~~~~~~~i~~~K~llg~~~ 87 (409)
T 4gni_A 9 APGERVVIGITFGNSNSSIAHTVDDKAEVIANEDGDRQIPTILSYVD-GDEYYGQQAKNFLVRNPKNTVAYFRDILGQDF 87 (409)
T ss_dssp ----CCEEEEEECSSEEEEEEEETTEEEEECCTTSCSSEECEEEEET-TEEEEHHHHHHHHHHCGGGEEESCGGGTTCCG
T ss_pred CCCCCcEEEEEcCCCeEEEEEEeCCceEEEECCCCCccCceEEEECC-CcEEEcHHHHHhhHhChHhhHHHHHHHhCCCc
Confidence 34567899999999999999999999999999999999999999975 56999999999999999999999999999998
Q ss_pred CCcccC--CCCeEEecCCCceEEEecC--------cccCHHhHHHHHHHHHHHHHHHHhCCCcCcEEEEeCCCCCHHHHH
Q psy8852 209 KNINTN--SFPYDFQNKFGMLHIKTIS--------GIKSPIEISAQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQ 278 (634)
Q Consensus 209 ~~~~~~--~~~~~i~~~~~~~~~~~~~--------~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~viTVPa~~~~~qr~ 278 (634)
++.... ..++.+...+|.+.+.+.. ..++|+++++++|++|++.++.+++.++..+|||||++|++.||+
T Consensus 88 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~ev~~~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~ 167 (409)
T 4gni_A 88 KSVDPTHNHASAHPQEAGDNVVFTIKDKAEEDAEPSTLTVSEIATRYLRRLVGAASEYLGKKVTSAVITIPTNFTEKQKA 167 (409)
T ss_dssp GGCCCGGGTTSCCCEEETTEEEEEECCSSCSSCCCEEEEHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHH
T ss_pred cchhhhhhccccceecCCCcEEEEEecCCCCCCcceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHH
Confidence 764332 4455555667888887543 389999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCceeeeecchhHHHHHhhhcc--CccceEEEEEEeCCCeEEEEEEEEeCCeEEEEEEcCCCCccchhHHH
Q psy8852 279 FTKNAAKLAGLNVLRLLNEPTSAAIAYKLDK--NIFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDY 356 (634)
Q Consensus 279 ~l~~aa~~aGl~~~~li~Ep~AAa~~y~~~~--~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~id~ 356 (634)
+|++|++.||++++.+++||+|||++|+... ...+..++|||+||||||++++++.++.++++++.++..+||.+||+
T Consensus 168 ~~~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~vlv~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~ 247 (409)
T 4gni_A 168 ALIAAAAAADLEVLQLISEPAAAVLAYDARPEATISDKIIVVADLGGSRSDVTVLASRSGMYTILATVHDYEYHGIALDK 247 (409)
T ss_dssp HHHHHHHHTTCEEEEEEEHHHHHHHHTTC------CCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEESSSSHHHHHH
T ss_pred HHHHHHHHcCCCeEEEEcCHHHHHHHHhcccccCCCCCEEEEEECCCCceEEEEEEEeCCeEEEEEecCCCCcCHHHHHH
Confidence 9999999999999999999999999998875 23778999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcc-------CCHHHHHHHHHHHHHHHHHhcCCcceEEEEE-ecCCceeEEEEeHHHHHHHHHHHHHHH
Q psy8852 357 CLFSWIVKNAFLKK-------LSYKDVNILMIKSREIKELLSYQSSVKLNVK-LSDKKIVNITIDMKQFFTITQHLVNRT 428 (634)
Q Consensus 357 ~l~~~l~~~~~~~~-------~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~-~~~g~~~~~~itr~~~e~~~~~~~~~~ 428 (634)
.|++++.+++.... .+++.+.+|+.+||++|+.||......+.++ +.+|.++.+.|||++|+++++|+++++
T Consensus 248 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i 327 (409)
T 4gni_A 248 VLIDHFSKEFLKKNPGAKDPRENPRSLAKLRLEAESTKRALSRSTNASFSVESLIDGLDFASTINRLRYETIARTVFEGF 327 (409)
T ss_dssp HHHHHHHHHHHHHSTTCCCGGGSHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCcccCHHHHHHHHHHHHHHHHhCCCCCceEEEeecccCCcceEEEeeHHHHHHHHHHHHHHH
Confidence 99999999987432 4678899999999999999999999888887 467889999999999999999999999
Q ss_pred HHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhhccCC--c------CCCCChhhHHHHHHHHHHhHhcCC
Q psy8852 429 ILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTT--L------LTSIDPDKAVVFGAAIQANFLSGN 497 (634)
Q Consensus 429 ~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~--~------~~~~~p~~ava~GAa~~a~~~~~~ 497 (634)
..+|+++|+.+++...+|+.|+|+||+|++|+|++.|++.||.+ + ....||++|||+|||++|+....+
T Consensus 328 ~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~v~~P~~~~~~~~p~~ava~GAa~~~~~~~~~ 404 (409)
T 4gni_A 328 NRLVESAVKKAGLDPLDVDEVIMSGGTSNTPRIAANFRYIFPESTRILAPSTDPSALNPSELQARGAALQASLIQEH 404 (409)
T ss_dssp HHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHSCTTSEEESTTTCTTCCCTTTHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCccccccccccCCCcCHHHHHHHHHHHHhhhhhhh
Confidence 99999999999999889999999999999999999999999875 3 567999999999999999876543
No 7
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=100.00 E-value=1.3e-59 Score=502.74 Aligned_cols=365 Identities=38% Similarity=0.574 Sum_probs=334.0
Q ss_pred CCceEEEEEeCCceEEEEEEECCeeEEEecCCCCccccEEEEEecCCcEEecHhHHhhhccCCCchhhhhhhhcCCCCCC
Q psy8852 131 NKCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPKNTISSIKRFIARDLKN 210 (634)
Q Consensus 131 ~~~~vvGID~GTt~s~va~~~~g~~~vi~~~~g~~~~Ps~v~~~~~~~~~~G~~A~~~~~~~~~~~i~~~k~~lg~~~~~ 210 (634)
+...+||||||||||++|++.+|.++++.++.|++.+||+|+|.++ .++||..|......+|.++++++|+++|+..++
T Consensus 21 ~~~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~-~~~vG~~A~~~~~~~~~~~~~~~Kr~lg~~~~~ 99 (404)
T 3i33_A 21 QSMPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFED 99 (404)
T ss_dssp --CCCEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECCEEECSS-CEEETHHHHHTTTTCSTTEECCGGGTTTCCTTS
T ss_pred ccCCEEEEEcCCccEEEEEEECCeeEEEECCCCCcccceEEEECCC-CEEecHHHHHhhHhChhhhHHHHHHHhCCCCCc
Confidence 4456899999999999999999999999999999999999999765 699999999999999999999999999999877
Q ss_pred c--ccC--CCCeEEecCCCceEEEe--cC--cccCHHhHHHHHHHHHHHHHHHHhCCCcCcEEEEeCCCCCHHHHHHHHH
Q psy8852 211 I--NTN--SFPYDFQNKFGMLHIKT--IS--GIKSPIEISAQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKN 282 (634)
Q Consensus 211 ~--~~~--~~~~~i~~~~~~~~~~~--~~--~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~viTVPa~~~~~qr~~l~~ 282 (634)
. +.. .+||.+...+|.+.+.+ .+ ..++|+++++++|++|++.++.+++.++..+|||||++|++.||+++++
T Consensus 100 ~~~~~~~~~~p~~~~~~~g~~~~~v~~~~~~~~~~~~ei~a~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~~~ 179 (404)
T 3i33_A 100 ATVQSDMKHWPFRVVSEGGKPKVQVEYKGETKTFFPEEISSMVLTKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQATKD 179 (404)
T ss_dssp HHHHHHHTTCSSEEEEETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHH
T ss_pred HHHHHHHhhCCceEEccCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHHhccCCCcEEEEECCCCCHHHHHHHHH
Confidence 3 222 68999887777766654 33 5899999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCceeeeecchhHHHHHhhhccCc---cceEEEEEEeCCCeEEEEEEEEeCCeEEEEEEcCCCCccchhHHHHHH
Q psy8852 283 AAKLAGLNVLRLLNEPTSAAIAYKLDKNI---FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLF 359 (634)
Q Consensus 283 aa~~aGl~~~~li~Ep~AAa~~y~~~~~~---~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~id~~l~ 359 (634)
|++.||++++.+++||+|||++|+..... .+..++|||+||||||++++++.++.+++++..++..+||.+||+.|.
T Consensus 180 a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~ 259 (404)
T 3i33_A 180 AGTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV 259 (404)
T ss_dssp HHHHHTCEEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHH
T ss_pred HHHHcCCCeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEEEEeCCeEEEEEEeCCCCCCHHHHHHHHH
Confidence 99999999999999999999999877652 578899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcc-----CCHHHHHHHHHHHHHHHHHhcCCcceEEEEE-ecCCceeEEEEeHHHHHHHHHHHHHHHHHHHH
Q psy8852 360 SWIVKNAFLKK-----LSYKDVNILMIKSREIKELLSYQSSVKLNVK-LSDKKIVNITIDMKQFFTITQHLVNRTILLSS 433 (634)
Q Consensus 360 ~~l~~~~~~~~-----~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~-~~~g~~~~~~itr~~~e~~~~~~~~~~~~~i~ 433 (634)
+++.++++... .+++.+.+|+.+||++|+.||......+.++ +.+|.++.+.|+|++|+++++++++++.+.++
T Consensus 260 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~g~~~~~~i~r~~~~~~~~~~~~~i~~~i~ 339 (404)
T 3i33_A 260 SHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVE 339 (404)
T ss_dssp HHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHTHHHHH
T ss_pred HHHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHhCCcCcceEEEEeeccCCceeEEEEcHHHHHHHHHHHHHHHHHHHH
Confidence 99998886543 5788899999999999999999998888887 46888999999999999999999999999999
Q ss_pred HHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhhc-cCCcCCCCChhhHHHHHHHHHHhHhcC
Q psy8852 434 KALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFF-KTTLLTSIDPDKAVVFGAAIQANFLSG 496 (634)
Q Consensus 434 ~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f-~~~~~~~~~p~~ava~GAa~~a~~~~~ 496 (634)
++|+.+++...+|+.|+|+||+|++|+|++.|++.| +.++..+.||++|||.|||++|+.+++
T Consensus 340 ~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~~ 403 (404)
T 3i33_A 340 KALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIG 403 (404)
T ss_dssp HHHHHHTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCSSCTTTHHHHHHHHHHHHHC-
T ss_pred HHHHHcCCCHhhCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHHhcC
Confidence 999999998889999999999999999999999999 678888899999999999999998865
No 8
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=100.00 E-value=3.2e-58 Score=490.59 Aligned_cols=363 Identities=40% Similarity=0.614 Sum_probs=334.0
Q ss_pred CceEEEEEeCCceEEEEEEECCeeEEEecCCCCccccEEEEEecCCcEEecHhHHhhhccCCCchhhhhhhhcCCCCCC-
Q psy8852 132 KCVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPKNTISSIKRFIARDLKN- 210 (634)
Q Consensus 132 ~~~vvGID~GTt~s~va~~~~g~~~vi~~~~g~~~~Ps~v~~~~~~~~~~G~~A~~~~~~~~~~~i~~~k~~lg~~~~~- 210 (634)
+..+||||||||+|++|++.+|.++++.++.|++.+||+|+|.++ .++||..|......+|.++++++|+++|+++++
T Consensus 17 ~~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~-~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~ 95 (394)
T 3qfu_A 17 YGTVIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFTDD-ERLIGDAAKNQVAANPQNTIFDIKRLIGLKYNDR 95 (394)
T ss_dssp CCSCEEEEECSSEEEEEEECSSCEEECCCTTSCSSEECCEEECSS-CEEESHHHHHTGGGCGGGEECCGGGTTTCCTTCH
T ss_pred CCCEEEEEeCcCcEEEEEEECCeeEEEECCCCCEeeceEEEEeCC-cEEecHHHHHhhHhCcccCHHHHHHHhCCCCCcH
Confidence 467899999999999999999999999999999999999999765 699999999999999999999999999999877
Q ss_pred -cccC--CCCeEEecCCCceEEEec--C--cccCHHhHHHHHHHHHHHHHHHHhCCCcCcEEEEeCCCCCHHHHHHHHHH
Q psy8852 211 -INTN--SFPYDFQNKFGMLHIKTI--S--GIKSPIEISAQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNA 283 (634)
Q Consensus 211 -~~~~--~~~~~i~~~~~~~~~~~~--~--~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~viTVPa~~~~~qr~~l~~a 283 (634)
++.. .+||.+...+|.+.+.+. + ..++|+++++++|++|++.++.+++.++..+|||||++|++.||+++++|
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~a~~l~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a 175 (394)
T 3qfu_A 96 SVQKDIKHLPFNVVNKDGKPAVEVSVKGEKKVFTPEEISGMILGKMKQIAEDYLGTKVTHAVVTVPAYFNDAQRQATKDA 175 (394)
T ss_dssp HHHHHHTTCSSEEEEETTEEEEEEESSSSEEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHHhhcCCeEEEcCCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHhcCCCcceEEEEECCCCCHHHHHHHHHH
Confidence 3332 689998877777766643 2 47999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCceeeeecchhHHHHHhhhccCccceEEEEEEeCCCeEEEEEEEEeCCeEEEEEEcCCCCccchhHHHHHHHHHH
Q psy8852 284 AKLAGLNVLRLLNEPTSAAIAYKLDKNIFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWIV 363 (634)
Q Consensus 284 a~~aGl~~~~li~Ep~AAa~~y~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~ 363 (634)
++.||++.+.+++||+|||++|+......+..++|||+||||||++++++.++.+++++..++..+||.+||+.|.+++.
T Consensus 176 ~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~vlV~D~Gggt~dvsv~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~l~ 255 (394)
T 3qfu_A 176 GTIAGLNVLRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFDYKIVRQLI 255 (394)
T ss_dssp HHHTTCEEEEEEEHHHHHHHHTTTTSCSSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHH
T ss_pred HHHcCCceEEEecCHHHHHHHHhhccCCCCceEEEEEcCCCceeEEEEEEeCCEEEEEEEcCCCCCChHHHHHHHHHHHH
Confidence 99999999999999999999998777657889999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcc-----CCHHHHHHHHHHHHHHHHHhcCCcceEEEEE-ecCCceeEEEEeHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8852 364 KNAFLKK-----LSYKDVNILMIKSREIKELLSYQSSVKLNVK-LSDKKIVNITIDMKQFFTITQHLVNRTILLSSKALM 437 (634)
Q Consensus 364 ~~~~~~~-----~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~-~~~g~~~~~~itr~~~e~~~~~~~~~~~~~i~~~l~ 437 (634)
+++.... .+++.+.+|+.+||++|+.||......+.++ +.+|.++.+.++|++|+++++++++++...+.++|+
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~~~~~~~~i~r~~~~~~~~~~~~~i~~~i~~~l~ 335 (394)
T 3qfu_A 256 KAFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQMSTRIEIDSFVDGIDLSETLTRAKFEELNLDLFKKTLKPVEKVLQ 335 (394)
T ss_dssp HHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEETTEEEEEEEEHHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred HHHHHHcCCCCCcCHHHHHHHHHHHHHHHHHcccCCcEEEEEEeccCCceeEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8886543 4678899999999999999999999888887 467889999999999999999999999999999999
Q ss_pred HcCCCcCCCCeEEEEcCCcCcHHHHHHHHhhc-cCCcCCCCChhhHHHHHHHHHHhHhc
Q psy8852 438 DANLTIKDINNVILVGGSTRMKHIHEGVSNFF-KTTLLTSIDPDKAVVFGAAIQANFLS 495 (634)
Q Consensus 438 ~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f-~~~~~~~~~p~~ava~GAa~~a~~~~ 495 (634)
.+++...+++.|+|+||+|++|+|++.|++.| +.++..+.||+++||.|||++|+.++
T Consensus 336 ~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~ls 394 (394)
T 3qfu_A 336 DSGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGAAVQAGVLS 394 (394)
T ss_dssp HHTCCGGGCCEEEEESGGGGSHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHHC
T ss_pred HcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHhhC
Confidence 99999889999999999999999999999999 78888889999999999999998763
No 9
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=100.00 E-value=3.3e-58 Score=488.23 Aligned_cols=361 Identities=40% Similarity=0.621 Sum_probs=326.5
Q ss_pred eEEEEEeCCceEEEEEEECCeeEEEecCCCCccccEEEEEecCCcEEecHhHHhhhccCCCchhhhhhhhcCCCCCC--c
Q psy8852 134 VSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPKNTISSIKRFIARDLKN--I 211 (634)
Q Consensus 134 ~vvGID~GTt~s~va~~~~g~~~vi~~~~g~~~~Ps~v~~~~~~~~~~G~~A~~~~~~~~~~~i~~~k~~lg~~~~~--~ 211 (634)
.+||||||||||++|++.+|.++++.++.|.+.+||+|+|.++++++||..|......+|.++++++|++||+.+.+ +
T Consensus 3 ~~vGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~ 82 (383)
T 1dkg_D 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEV 82 (383)
T ss_dssp CCCEEECCSSEEEEEEEETTEEEECCCTTSCSEEECEEEECTTSCEEESHHHHTTSTTCGGGEEECGGGTTTCBSCSHHH
T ss_pred cEEEEEcCCCCEEEEEEECCeeEEEECCCCCcccceEEEEECCCCEEECHHHHHhhhhCccceeehhHHhhCCCCCcHHH
Confidence 47899999999999999999999999999999999999998777899999999999999999999999999998765 2
Q ss_pred ccC--CCCeEEe-cCCCceEEEecCcccCHHhHHHHHHHHHHHHHHHHhCCCcCcEEEEeCCCCCHHHHHHHHHHHHHcC
Q psy8852 212 NTN--SFPYDFQ-NKFGMLHIKTISGIKSPIEISAQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAG 288 (634)
Q Consensus 212 ~~~--~~~~~i~-~~~~~~~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~viTVPa~~~~~qr~~l~~aa~~aG 288 (634)
+.. .+||.+. ..+|.+.+.+++..++|+++++++|+++++.++.+++.++..+|||||++|++.||+++++|++.||
T Consensus 83 ~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~i~~~~L~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a~~~aG 162 (383)
T 1dkg_D 83 QRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAG 162 (383)
T ss_dssp HHHTTTCSSEEEECSSSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEECBCTTCCHHHHHHHHHHHHHTT
T ss_pred HHHhhcCCeEEEEcCCCcEEEEECCEEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHHcC
Confidence 222 5789887 7788888888777899999999999999999999999888999999999999999999999999999
Q ss_pred CceeeeecchhHHHHHhhhccCccceEEEEEEeCCCeEEEEEEEEe----CCeEEEEEEcCCCCccchhHHHHHHHHHHH
Q psy8852 289 LNVLRLLNEPTSAAIAYKLDKNIFEGIFAVYDLGGGTFDISILKFK----NGVFKVLSVGGDSNLGGDDFDYCLFSWIVK 364 (634)
Q Consensus 289 l~~~~li~Ep~AAa~~y~~~~~~~~~~vlV~D~GggT~dvsv~~~~----~~~~~v~~~~~~~~lGG~~id~~l~~~l~~ 364 (634)
++.+.+++||+|||++|+......+..++|||+||||||+++++.. ++.++++++.++..+||.+||+.|.+++.+
T Consensus 163 l~~~~li~Ep~Aaa~~~~~~~~~~~~~~lVvD~Gggttdvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~ 242 (383)
T 1dkg_D 163 LEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVE 242 (383)
T ss_dssp CEESCCCBHHHHHHHHHTCCC-CCEEEEEEEEECSSCEEEEEEEEEC----CCCEEEEEEEESSCSHHHHHHHHHHHHHH
T ss_pred CceEEEeccHHHHHHHHHhccCCCCcEEEEEEcCCCeEEEEEEEEEecCCCCeEEEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence 9999999999999999987654356789999999999999999998 678889998898999999999999999999
Q ss_pred HHhhcc-----CCHHHHHHHHHHHHHHHHHhcCCcceEEEEEe-c---CC-ceeEEEEeHHHHHHHHHHHHHHHHHHHHH
Q psy8852 365 NAFLKK-----LSYKDVNILMIKSREIKELLSYQSSVKLNVKL-S---DK-KIVNITIDMKQFFTITQHLVNRTILLSSK 434 (634)
Q Consensus 365 ~~~~~~-----~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~-~---~g-~~~~~~itr~~~e~~~~~~~~~~~~~i~~ 434 (634)
++..+. .+++.+.+|+..||++|+.|+......+.++. . +| .++.++|+|++|+++++|+++++.+.+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~G~~~~~~~it~~~~~~~~~~~~~~i~~~i~~ 322 (383)
T 1dkg_D 243 EFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIELLKV 322 (383)
T ss_dssp HHHHHHCCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHSHHHHHHHHHHHHH
T ss_pred HHHHHhCCCcccCHHHHHHHHHHHHHHHHHhCCCCceEEEEecccccCCCCeeEEEEEeHHHHHHHHHHHHHHHHHHHHH
Confidence 986542 46788899999999999999998887777763 2 23 45678999999999999999999999999
Q ss_pred HHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhhccCCcCCCCChhhHHHHHHHHHHhHh
Q psy8852 435 ALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLLTSIDPDKAVVFGAAIQANFL 494 (634)
Q Consensus 435 ~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~~ 494 (634)
+|+++++...+++.|+|+||+|++|+|++.|++.|+.++..+.||++|||+|||++|+.+
T Consensus 323 ~l~~~~~~~~~i~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~Gaa~~a~~l 382 (383)
T 1dkg_D 323 ALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVL 382 (383)
T ss_dssp HHHTTTCCTTTCCEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHHHTTTT
T ss_pred HHHHcCCCHhhCCEEEEecCccccHHHHHHHHHHhCCCCCCCcChHHHHHHHHHHHHHhh
Confidence 999999888899999999999999999999999999988889999999999999999765
No 10
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=100.00 E-value=2.7e-41 Score=352.81 Aligned_cols=310 Identities=21% Similarity=0.257 Sum_probs=242.5
Q ss_pred eEEEEEeCCceEEEEEEECCeeEEEecCCCCccccEEEEEecC-Cc-EEecHhHHhhhccCCCchhhhhhhhcCCCCCCc
Q psy8852 134 VSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPD-GK-IYVGKKAKITQNIDPKNTISSIKRFIARDLKNI 211 (634)
Q Consensus 134 ~vvGID~GTt~s~va~~~~g~~~vi~~~~g~~~~Ps~v~~~~~-~~-~~~G~~A~~~~~~~~~~~i~~~k~~lg~~~~~~ 211 (634)
.+|||||||++|++++..++ .++ .+||+|+|.++ ++ +++|.+|+....++|.++...
T Consensus 4 ~~igIDlGT~~s~v~~~~~~--~~~-------~~PS~v~~~~~~~~~~~vG~~A~~~~~~~~~~~~~~------------ 62 (344)
T 1jce_A 4 KDIGIDLGTANTLVFLRGKG--IVV-------NEPSVIAIDSTTGEILKVGLEAKNMIGKTPATIKAI------------ 62 (344)
T ss_dssp CEEEEEECSSEEEEEETTTE--EEE-------EEESCEEEETTTCCEEEESHHHHTTTTCCCTTEEEE------------
T ss_pred ceEEEEcCcCcEEEEECCCC--EEE-------eeCcEEEEecCCCcEEEEcHHHHHhcccCCCCeEEE------------
Confidence 47999999999999875443 333 28999999876 44 579999987766666554210
Q ss_pred ccCCCCeEEecCCCceEEEecCcccCHHhHHHHHHHHHHHHHHHHhCCCcCcEEEEeCCCCCHHHHHHHHHHHHHcCCce
Q psy8852 212 NTNSFPYDFQNKFGMLHIKTISGIKSPIEISAQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNV 291 (634)
Q Consensus 212 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~viTVPa~~~~~qr~~l~~aa~~aGl~~ 291 (634)
.|++ ++.+...+....++.++.+.+..........+|||||++|++.||+++++|++.||++.
T Consensus 63 ----~p~~-------------~g~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~vitvP~~~~~~~r~~~~~a~~~aG~~~ 125 (344)
T 1jce_A 63 ----RPMR-------------DGVIADYTVALVMLRYFINKAKGGMNLFKPRVVIGVPIGITDVERRAILDAGLEAGASK 125 (344)
T ss_dssp ----CCEE-------------TTEESSHHHHHHHHHHHHHHHHTSCCSCCCEEEEEECTTCCHHHHHHHHHHHHHTTCSE
T ss_pred ----ecCC-------------CCeeCChHHHHHHHHHHHHHHhhccccCCCeEEEEECCCCCHHHHHHHHHHHHHcCCCe
Confidence 1111 12233344455555555554433111124789999999999999999999999999999
Q ss_pred eeeecchhHHHHHhhhccCccceEEEEEEeCCCeEEEEEEEEeCCeEEEEEEcCCCCccchhHHHHHHHHHHHHHhhccC
Q psy8852 292 LRLLNEPTSAAIAYKLDKNIFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWIVKNAFLKKL 371 (634)
Q Consensus 292 ~~li~Ep~AAa~~y~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~ 371 (634)
+.+++||+|||++|+.... .+..++|||+||||||+++++.... + ..++..+||.+||+.|.+++.++++...
T Consensus 126 ~~li~ep~Aaa~~~~~~~~-~~~~~lVvDiGggttdvsv~~~~~~----~-~~~~~~lGG~~id~~l~~~l~~~~~~~~- 198 (344)
T 1jce_A 126 VFLIEEPMAAAIGSNLNVE-EPSGNMVVDIGGGTTEVAVISLGSI----V-TWESIRIAGDEMDEAIVQYVRETYRVAI- 198 (344)
T ss_dssp EEEEEHHHHHHHHTTCCTT-SSSCEEEEEECSSCEEEEEEETTEE----E-EEEEESCSHHHHHHHHHHHHHHHHCEEC-
T ss_pred EeccCCHHHHHHhcCCCCC-CCceEEEEEeCCCeEEEEEEEcCCE----E-eeCCCCccChhHHHHHHHHHHHHhCccc-
Confidence 9999999999999987654 5678999999999999999887532 2 2456899999999999999998876443
Q ss_pred CHHHHHHHHHHHHHHHHHhcCCcc------eEEEEE---ecCCceeEEEEeHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Q psy8852 372 SYKDVNILMIKSREIKELLSYQSS------VKLNVK---LSDKKIVNITIDMKQFFTITQHLVNRTILLSSKALMDANLT 442 (634)
Q Consensus 372 ~~~~~~~L~~~~e~~K~~Ls~~~~------~~i~i~---~~~g~~~~~~itr~~~e~~~~~~~~~~~~~i~~~l~~~~~~ 442 (634)
+ ...||++|+.|+.... ..+.++ +.+|.+..++|+|++|+++++|.++++.+.|+++|+.++..
T Consensus 199 ~-------~~~ae~~K~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~ 271 (344)
T 1jce_A 199 G-------ERTAERVKIEIGNVFPSKENDELETTVSGIDLSTGLPRKLTLKGGEVREALRSVVVAIVESVRTTLEKTPPE 271 (344)
T ss_dssp C-------HHHHHHHHHHHCBCSCCHHHHHCEEEEEEEETTTTEEEEEEEEHHHHHHHTHHHHHHHHHHHHHHHHTSCHH
T ss_pred C-------HHHHHHHHHHHhccCccccCCcceEEEeccccCCCCceeEEEeHHHHHHHHHHHHHHHHHHHHHHHHhCCch
Confidence 1 4679999999987643 345554 24677789999999999999999999999999999987532
Q ss_pred --cCCC-CeEEEEcCCcCcHHHHHHHHhhccCCcCCCCChhhHHHHHHHHHHhHhc
Q psy8852 443 --IKDI-NNVILVGGSTRMKHIHEGVSNFFKTTLLTSIDPDKAVVFGAAIQANFLS 495 (634)
Q Consensus 443 --~~~i-~~ViLvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~~~ 495 (634)
...+ +.|+|+||+|++|++++.|++.|+.++....||+++||.||++++..++
T Consensus 272 ~~~~~~~~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~Gaa~~a~~~~ 327 (344)
T 1jce_A 272 LVSDIIERGIFLTGGGSLLRGLDTLLQKETGISVIRSEEPLTAVAKGAGMVLDKVN 327 (344)
T ss_dssp HHHHHHHHCEEEESGGGCSBTHHHHHHHHHSSCEEECSSTTTHHHHHHHHGGGCHH
T ss_pred hccchhhCcEEEECccccchHHHHHHHHHHCCCccccCChHHHHHHHHHHHHhChH
Confidence 1224 6899999999999999999999998888889999999999999987544
No 11
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.96 E-value=7.4e-29 Score=257.54 Aligned_cols=229 Identities=19% Similarity=0.152 Sum_probs=172.1
Q ss_pred cccCHHhHHHHHHHHHHHHHHHHhCCCcCcEE--EEeCCCCCHHHHHHHHHHHHHc--------C------Cceeeeecc
Q psy8852 234 GIKSPIEISAQIFITLKKIAENAVNNRIFGAV--ITVPAYFNDIQRQFTKNAAKLA--------G------LNVLRLLNE 297 (634)
Q Consensus 234 ~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~v--iTVPa~~~~~qr~~l~~aa~~a--------G------l~~~~li~E 297 (634)
+.+.++....+++..|++.++...+.+ .++| ++||++|+..||+++++++..+ | ++.+.+++|
T Consensus 93 ~~~~~~~~~~ll~~~l~~~~~~~~~~~-~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li~E 171 (346)
T 2fsj_A 93 GRLASKEAFPLIAAALWESGIHNDGSP-VDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRPQ 171 (346)
T ss_dssp TCTTSTTTHHHHHHHHHHHCCCC---C-EEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEEET
T ss_pred CcccChhHHHHHHHHHHHhhhccCCCc-eEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEEcc
Confidence 355556666666666665542222233 5699 9999999999999999998776 4 356889999
Q ss_pred hhHHHHHhhhcc--CccceEEEEEEeCCCeEEEEEEEEeCCeEEEEEEcCCCCccchhHHHHHHHHHHHHHhhccCCHHH
Q psy8852 298 PTSAAIAYKLDK--NIFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWIVKNAFLKKLSYKD 375 (634)
Q Consensus 298 p~AAa~~y~~~~--~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~ 375 (634)
|.|||++|.... ....++++|+|+||||||++++++.++. .+...+++..+||.++++.|.+++.++++... +..
T Consensus 172 p~AAa~~~l~~~~~~~~~~~vlVvDIGgGTtDv~vi~~~~g~-~v~~~s~~~~lGg~~i~~~I~~~i~~~~g~~~-~i~- 248 (346)
T 2fsj_A 172 GVGAALYLLNQGIIEQQPGYGVVIDVGSRTTDVLTINLMDME-PVVELSFSLQIGVGDAISALSRKIAKETGFVV-PFD- 248 (346)
T ss_dssp THHHHHHHHHHTSSCCCSSEEEEEEECSSCEEEEEEETTTTE-ECGGGCEEESCCHHHHHHHHHHHHHHHHCCCC-CHH-
T ss_pred HHHHHHHhhccccccccCCcEEEEECCCCcEEEEEEEecCCE-EEeecCCCcchhHHHHHHHHHHHHHHHhCCCc-CCC-
Confidence 999999883221 1134789999999999999999987776 45555677899999999999999999887520 101
Q ss_pred HHHHHHHHHHHHHHhcCCcceEEEEEecCCceeEEEEeHHHH-HHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcC
Q psy8852 376 VNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNITIDMKQF-FTITQHLVNRTILLSSKALMDANLTIKDINNVILVGG 454 (634)
Q Consensus 376 ~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~g~~~~~~itr~~~-e~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG 454 (634)
...+| . ...+.+ .|. .++++++ +++++++++++.+.+++.|+++ .+.++.|+|+||
T Consensus 249 ----~~~~e-------~--~~~~~~---~g~----~~~~~~i~~~~i~~~~~~i~~~i~~~l~~~---~~~i~~IvL~GG 305 (346)
T 2fsj_A 249 ----LAQEA-------L--SHPVMF---RQK----QVGGPEVSGPILEDLANRIIENIRLNLRGE---VDRVTSLIPVGG 305 (346)
T ss_dssp ----HHHHH-------T--TSCEEE---TTE----EECSHHHHHHHHHHHHHHHHHHHHHHHGGG---GGGEEEEEEEST
T ss_pred ----HHHHh-------c--CCeEeE---CCc----cCCHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhcccEEEEECC
Confidence 11122 1 112222 343 3558999 9999999999999999999876 356899999999
Q ss_pred CcCcHHHHHHHHhhccCCcCC---CCChhhHHHHHHHHHHh
Q psy8852 455 STRMKHIHEGVSNFFKTTLLT---SIDPDKAVVFGAAIQAN 492 (634)
Q Consensus 455 ~s~~p~v~~~l~~~f~~~~~~---~~~p~~ava~GAa~~a~ 492 (634)
+|++ +++.+++.|+.. .. ..||++|+|.|+..++.
T Consensus 306 ga~l--l~~~l~~~~~~~-~i~~~~~~P~~ava~G~~~~~~ 343 (346)
T 2fsj_A 306 GSNL--IGDRFEEIAPGT-LVKIKPEDLQFANALGYRDAAE 343 (346)
T ss_dssp THHH--HGGGGGGGSTTC-BCCCCTTTTTTHHHHHHHHHHH
T ss_pred cHHH--HHHHHHHHCcCc-EEeccCCCcHHHHHHHHHHHHh
Confidence 9998 999999999743 34 67999999999998764
No 12
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.95 E-value=1.4e-26 Score=233.14 Aligned_cols=207 Identities=21% Similarity=0.311 Sum_probs=176.6
Q ss_pred ccCHHhHHHHHHHHHHHHHHHHhCCCcCcEEEEeCCCCCHHHHHHHHHHHHHcCCceeeeecchhHHHHHhhhccCccce
Q psy8852 235 IKSPIEISAQIFITLKKIAENAVNNRIFGAVITVPAYFNDIQRQFTKNAAKLAGLNVLRLLNEPTSAAIAYKLDKNIFEG 314 (634)
Q Consensus 235 ~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~viTVPa~~~~~qr~~l~~aa~~aGl~~~~li~Ep~AAa~~y~~~~~~~~~ 314 (634)
.+...+.+..+|+++++.+....+.....+++|+|+.|...+|+.++.+++.+|++...++.||+|++++++...
T Consensus 66 ~i~d~~~~~~~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~~~~~~~~~~~~~g~~~~~i~~e~~A~a~~~~~~~----- 140 (272)
T 3h1q_A 66 LVVDYIGAIQIVRELKAKVERLLGSELFQAATAIPPGTVGRNAEACGHVVAGAGLELVTLVDEPVAAARALGIND----- 140 (272)
T ss_dssp BCTTHHHHHHHHHHHHHHHHHHSSSCCCEEEEECCSCC---CTTHHHHHHHHTTCEEEEEECHHHHHHHHHTCSS-----
T ss_pred EEEcHHHHHHHHHHHHHHHHHhcCCccCeEEEEcCCCCCHHHHHHHHHHHHHcCCeeeecccHHHHHHHHHcCCC-----
Confidence 344456778899999999988888888899999999999999999999999999999999999999999887542
Q ss_pred EEEEEEeCCCeEEEEEEEEeCCeEEEEEEcCCCCccchhHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHhcCCc
Q psy8852 315 IFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWIVKNAFLKKLSYKDVNILMIKSREIKELLSYQS 394 (634)
Q Consensus 315 ~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~ 394 (634)
.+|+|+|||||+++++. ++.. + ......+||.+||+.+.+++.- -...++++|+.++
T Consensus 141 -~~viDiGggst~~~~~~--~g~~--~-~~~~~~~Gg~~~~~~l~~~l~~--------------~~~~ae~~k~~~~--- 197 (272)
T 3h1q_A 141 -GIVVDIGGGTTGIAVIE--KGKI--T-ATFDEPTGGTHLSLVLAGSYKI--------------PFEEAETIKKDFS--- 197 (272)
T ss_dssp -EEEEEECSSCEEEEEEE--TTEE--E-EECCBSCCHHHHHHHHHHHHTC--------------CHHHHHHHHHSST---
T ss_pred -EEEEEECCCcEEEEEEE--CCEE--E-EEecCCCcHHHHHHHHHHHhCC--------------CHHHHHHHHHhcC---
Confidence 49999999999999886 3432 2 3466899999999999876641 1367888998876
Q ss_pred ceEEEEEecCCceeEEEEeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhhccCCcC
Q psy8852 395 SVKLNVKLSDKKIVNITIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLL 474 (634)
Q Consensus 395 ~~~i~i~~~~g~~~~~~itr~~~e~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~~ 474 (634)
+++++++++.+.++++...+.+.++..+ +++.|+|+||++++|++++.+++.|+.++.
T Consensus 198 ------------------~~~~~~~~~~~~~~~i~~~i~~~l~~~~----~~~~ivL~GG~a~~~~l~~~l~~~l~~~v~ 255 (272)
T 3h1q_A 198 ------------------RHREIMRVVRPVIEKMALIVKEVIKNYD----QTLPVYVVGGTAYLTGFSEEFSRFLGKEVQ 255 (272)
T ss_dssp ------------------THHHHHHHHHHHHHHHHHHHHHHTTTSC----SSCCEEEESGGGGSTTHHHHHHHHHSSCCB
T ss_pred ------------------CHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCccchhhHHHHHHHHhCCCcc
Confidence 6899999999999999999999998764 477999999999999999999999999998
Q ss_pred CCCChhhHHHHHHHHHH
Q psy8852 475 TSIDPDKAVVFGAAIQA 491 (634)
Q Consensus 475 ~~~~p~~ava~GAa~~a 491 (634)
.+.+|++++|.|||++|
T Consensus 256 ~~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 256 VPIHPLLVTPLGIALFG 272 (272)
T ss_dssp CCSSGGGHHHHHHHTTC
T ss_pred ccCChHHHHHHHHHhcC
Confidence 89999999999999864
No 13
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.95 E-value=1.4e-27 Score=220.04 Aligned_cols=110 Identities=38% Similarity=0.615 Sum_probs=101.3
Q ss_pred CCCccccCCCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCChhhHHHHHHHHHHHHHHHHHcCChhhhHHHHHHhcCCCCc
Q psy8852 2 KNYFDFFNLPKCFNIDMDLLDKIYYNFQKKIHPDNFIQKSKIDQDASVKLSTYLNKAYSILKDPFLRSIYLCKLNGIDLN 81 (634)
Q Consensus 2 ~~~~~~l~~~~~~~~~~~~i~~~y~~~~~~~HPD~~~~~~~~~~~~~~~~~~~i~~Ay~~L~d~~~r~~y~~~l~~~~~~ 81 (634)
+|||++||||++|++|.++|+++||+|+++|||||+++.++.++..+.++|+.||+||++|+||.+|+.|++.|+|..+.
T Consensus 4 ~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~g~~~~ 83 (174)
T 3hho_A 4 MNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLSLQGIEMN 83 (174)
T ss_dssp CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHTTCCCC
T ss_pred CCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHccCCCcc
Confidence 69999999999999999999999999999999999999988888889999999999999999999999999999999998
Q ss_pred cccccCCCHHHHHHHHHHHHHHHHHhhcch
Q psy8852 82 TKLNLNFSHDFLEQQMKWRETLSIIKNKKD 111 (634)
Q Consensus 82 ~~~~~~~~~~~l~~~~e~~e~~~~~~~~~~ 111 (634)
.+.++..|++|||++|||+|+|+++.+..+
T Consensus 84 ~e~~~~~d~~fLme~me~rE~le~~~~~~d 113 (174)
T 3hho_A 84 AEQQTLQDPMFLMEQMELREELESVTACAD 113 (174)
T ss_dssp ----CCCCHHHHHHHHHHHHHHHHHTSSSS
T ss_pred cccCCCCCHHHHHHHHHHHHHHHHHhhccc
Confidence 887889999999999999999999986655
No 14
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.94 E-value=2.5e-27 Score=217.50 Aligned_cols=110 Identities=34% Similarity=0.608 Sum_probs=103.1
Q ss_pred CCCccccCCCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCChhhHHHHHHHHHHHHHHHHHcCChhhhHHHHHHhcCCCCc
Q psy8852 2 KNYFDFFNLPKCFNIDMDLLDKIYYNFQKKIHPDNFIQKSKIDQDASVKLSTYLNKAYSILKDPFLRSIYLCKLNGIDLN 81 (634)
Q Consensus 2 ~~~~~~l~~~~~~~~~~~~i~~~y~~~~~~~HPD~~~~~~~~~~~~~~~~~~~i~~Ay~~L~d~~~r~~y~~~l~~~~~~ 81 (634)
+|||++||||+++.++..+||++||+|+++|||||+++.++.++..+.++|+.||+||++|+||.+|+.|++.+.|..+.
T Consensus 1 ~d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~g~~~~ 80 (171)
T 1fpo_A 1 MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLHGFDLA 80 (171)
T ss_dssp CHHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHTTTCCTT
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHhcCCCcc
Confidence 48999999999998899999999999999999999999988888899999999999999999999999999999999998
Q ss_pred cccccCCCHHHHHHHHHHHHHHHHHhhcch
Q psy8852 82 TKLNLNFSHDFLEQQMKWRETLSIIKNKKD 111 (634)
Q Consensus 82 ~~~~~~~~~~~l~~~~e~~e~~~~~~~~~~ 111 (634)
.+.++.+|++|||++|+|+|+|+++.+..+
T Consensus 81 ~e~~~~~d~~fLme~me~rE~lee~~~~~d 110 (171)
T 1fpo_A 81 SEQHTVRDTAFLMEQLELREELDEIEQAKD 110 (171)
T ss_dssp CSSSCCSCHHHHHHHHHHHHHHHHHHHHTC
T ss_pred ccccccCCHHHHHHHHHHHHHHHHhhccCC
Confidence 877888999999999999999999876443
No 15
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.94 E-value=2.8e-27 Score=223.38 Aligned_cols=108 Identities=32% Similarity=0.599 Sum_probs=102.2
Q ss_pred CCCccccCCCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCChhhHHHHHHHHHHHHHHHHHcCChhhhHHHHHHhcCCCCc
Q psy8852 2 KNYFDFFNLPKCFNIDMDLLDKIYYNFQKKIHPDNFIQKSKIDQDASVKLSTYLNKAYSILKDPFLRSIYLCKLNGIDLN 81 (634)
Q Consensus 2 ~~~~~~l~~~~~~~~~~~~i~~~y~~~~~~~HPD~~~~~~~~~~~~~~~~~~~i~~Ay~~L~d~~~r~~y~~~l~~~~~~ 81 (634)
.|||++|||+++|++|.++||++||+|+++|||||+++.++.++..+.++|++||+||++|+||.+|+.|++.+.|..+.
T Consensus 43 ~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~~l~G~~~~ 122 (207)
T 3bvo_A 43 RDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLLKLHGIEIP 122 (207)
T ss_dssp CCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHTTCCCC
T ss_pred CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhcCCCcc
Confidence 58999999999999999999999999999999999998888888999999999999999999999999999999999998
Q ss_pred cccccCCCHHHHHHHHHHHHHHHHHhhc
Q psy8852 82 TKLNLNFSHDFLEQQMKWRETLSIIKNK 109 (634)
Q Consensus 82 ~~~~~~~~~~~l~~~~e~~e~~~~~~~~ 109 (634)
++.++.+|++|||++|+|+|+|+++.+.
T Consensus 123 ~e~~~~~d~~fLme~me~~E~le~~~~~ 150 (207)
T 3bvo_A 123 ERTDYEMDRQFLIEIMEINEKLAEAESE 150 (207)
T ss_dssp SSCSSSSCHHHHHHHHHHHHHHHHCCSH
T ss_pred cccccCCCHHHHHHHHHHHHHHHHccCH
Confidence 8878899999999999999999998654
No 16
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.94 E-value=4.1e-27 Score=248.63 Aligned_cols=315 Identities=15% Similarity=0.123 Sum_probs=205.1
Q ss_pred ceEEEEEeCCceEEEEEEECCeeEEEecCCCCccccEEEEEecCCcEEecHhHHhhhccCCCchhhhhhhhcCCCCCCcc
Q psy8852 133 CVSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDGKIYVGKKAKITQNIDPKNTISSIKRFIARDLKNIN 212 (634)
Q Consensus 133 ~~vvGID~GTt~s~va~~~~g~~~vi~~~~g~~~~Ps~v~~~~~~~~~~G~~A~~~~~~~~~~~i~~~k~~lg~~~~~~~ 212 (634)
+.++|||+||++++++++.+|.+.+. ..|...+||... .+| ...++..+...+|+++++....
T Consensus 13 ~~~vgiDiGt~~i~~~~~~~~~~~i~--~~g~~~~ps~~~--~~g-----------~i~d~~~~~~~ik~~~~~~~~~-- 75 (377)
T 2ych_A 13 VEALGLEIGASALKLVEVSGNPPALK--ALASRPTPPGLL--MEG-----------MVAEPAALAQEIKELLLEARTR-- 75 (377)
T ss_dssp CCCEEEEECSSEEEEEEEETTTTEEE--EEEEEECCTTSE--ETT-----------EESCHHHHHHHHHHHHHHHTCC--
T ss_pred CceEEEEeCCCeEEEEEEeCCceEEE--EEEeEECCCCcc--cCC-----------CcCCHHHHHHHHHHHHHHcCCC--
Confidence 45799999999999998877665542 223334454321 122 2235667788888888752111
Q ss_pred cCCCCeEEecCCCceEE-EecCcccCHHhHHHHHHHHHHHHHHHHhCCCcCcEEEEeCCCCC------------------
Q psy8852 213 TNSFPYDFQNKFGMLHI-KTISGIKSPIEISAQIFITLKKIAENAVNNRIFGAVITVPAYFN------------------ 273 (634)
Q Consensus 213 ~~~~~~~i~~~~~~~~~-~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~viTVPa~~~------------------ 273 (634)
.. ..-+.-....+.. ......++++++-.. ++..++++++.++.+++|++|..=.
T Consensus 76 ~~--~v~~~i~~~~~~~~~~~~~~v~~~el~~~----i~~ea~~~~~~~~~~~vid~~~~~~~~~~~~~~~~~v~~va~~ 149 (377)
T 2ych_A 76 KR--YVVTALSNLAVILRPIQVPKMPLKEMEEA----VRWEAERYIPFPIDEVVLDFAPLTPLSEVQEGEQVQVMVAAAR 149 (377)
T ss_dssp CC--EEEEEECGGGCEEEEEEEECCCHHHHHHH----HHHHHGGGCSSCC-CEEEEEEESSCGGGSCTTSEEEEEEEEEE
T ss_pred cc--eEEEEecCCcEEEEEEECCCCCHHHHHHH----HHHHHhhcCCCChhHceEEEEEeCCCCCCCCcceeEEEEEEec
Confidence 10 0001111111111 111135777776543 3446777888899999999873111
Q ss_pred HHHHHHHHHHHHHcCCceeeeecchhHHHHHhhhccC-ccceEEEEEEeCCCeEEEEEEEEeCCeEEEEEEcCCCCccch
Q psy8852 274 DIQRQFTKNAAKLAGLNVLRLLNEPTSAAIAYKLDKN-IFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGD 352 (634)
Q Consensus 274 ~~qr~~l~~aa~~aGl~~~~li~Ep~AAa~~y~~~~~-~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~ 352 (634)
....+.+++|++.||++...++.||.|||++|+.... ..+..++|+|+||||||+++++. +.. . ..++..+||.
T Consensus 150 ~~~v~~~~~~~~~aGl~~~~i~~ep~Aaa~~~~~~~~~~~~~~~~vvDiGggttdi~i~~~--g~~--~-~~~~~~~GG~ 224 (377)
T 2ych_A 150 QEAVAGVLEALRGAGLVPVVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLRG--DKP--L-AVRVLTLSGK 224 (377)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEHHHHTTGGGHHHHHTSTTCEEEEEEECSSCEEEEEEET--TEE--E-EEEEESCSHH
T ss_pred HHHHHHHHHHHHHCCCceEEEecchHHHHHHHHhhcccccCCeEEEEEECCCcEEEEEEEC--CEE--E-EEEeeechHH
Confidence 1123889999999999999999999999999865332 24677999999999999999873 332 1 2456899999
Q ss_pred hHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHhcCCcceEE----EEEecCCceeEEEEeHHHHHHHHHHHHHHH
Q psy8852 353 DFDYCLFSWIVKNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKL----NVKLSDKKIVNITIDMKQFFTITQHLVNRT 428 (634)
Q Consensus 353 ~id~~l~~~l~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i----~i~~~~g~~~~~~itr~~~e~~~~~~~~~~ 428 (634)
+||+.|.+. ++.. +..||++|+.++....... .+++ ......+++++|++++++.++++
T Consensus 225 ~i~~~i~~~----~~~~----------~~~aE~~K~~~~~~~~~~~~~~~~i~~---~~~~~~i~~~~~~~~i~~~~~~i 287 (377)
T 2ych_A 225 DFTEAIARS----FNLD----------LLAAEEVKRTYGMATLPTEDEELLLDF---DAERERYSPGRIYDAIRPVLVEL 287 (377)
T ss_dssp HHHHHHHHH----TTCC----------HHHHHHHHHHTC----------------------------CHHHHHHHHHHHH
T ss_pred HHHHHHHHH----hCCC----------HHHHHHHHhhccccccccccccccccc---ccccccCCHHHHHHHHHHHHHHH
Confidence 999999862 2221 4689999999876433211 1221 12445789999999999999999
Q ss_pred HHHHHHHHHHc--CCCcCCCCeEEEEcCCcCcHHHHHHHHhhccCCcCCC--------------------CChhhHHHHH
Q psy8852 429 ILLSSKALMDA--NLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLLTS--------------------IDPDKAVVFG 486 (634)
Q Consensus 429 ~~~i~~~l~~~--~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~~~~--------------------~~p~~ava~G 486 (634)
...|++.|+.. +.....++.|+|+||+|++|.+++.+++.|+.++... .+|..++|.|
T Consensus 288 ~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l~~~v~~~~P~~~v~~~~~~~~~~~l~~~~p~~a~a~G 367 (377)
T 2ych_A 288 TQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTLGVNLEPVNPWEAVAVDPKRFESEQLQEIGPEFAVALG 367 (377)
T ss_dssp HHHHHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHHHHHTSEEEECCGGGGSBCCTTTSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCCcCEEEEECccccchhHHHHHHHHhCCCeEecCchhhcccCcccCCHHHHHhhhHHHHHHHH
Confidence 99999999853 4555679999999999999999999999998654321 2456778999
Q ss_pred HHHHHh
Q psy8852 487 AAIQAN 492 (634)
Q Consensus 487 Aa~~a~ 492 (634)
+|+++.
T Consensus 368 lal~~~ 373 (377)
T 2ych_A 368 LALRGV 373 (377)
T ss_dssp HHHHHT
T ss_pred HHHcCC
Confidence 998864
No 17
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=99.94 E-value=1.7e-25 Score=237.09 Aligned_cols=199 Identities=17% Similarity=0.082 Sum_probs=159.9
Q ss_pred HHHHHHHHHHHHHcCCceeeeecchhHHHHHhhhccCccceEEEEEEeCCCeEEEEEEEEeCCeEEEEEEcCCCCccchh
Q psy8852 274 DIQRQFTKNAAKLAGLNVLRLLNEPTSAAIAYKLDKNIFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDD 353 (634)
Q Consensus 274 ~~qr~~l~~aa~~aGl~~~~li~Ep~AAa~~y~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~ 353 (634)
....+.+.+|++.||+++..++.||.|||++|..... .+..++|+|+||||||+++++ ++.+. ..++.++||++
T Consensus 167 ~~~v~n~~~~~~~AGL~v~~lv~ep~Aaa~a~l~~~~-~~~gv~vvDiGggttdisi~~--~g~~~---~~~~i~~GG~~ 240 (419)
T 4a2a_A 167 LKVYEMFYNFLQDTVKSPFQLKSSLVSTAEGVLTTPE-KDRGVVVVNLGYNFTGLIAYK--NGVPI---KISYVPVGMKH 240 (419)
T ss_dssp HHHHHHHHHHHHTTSCSCEEEEEHHHHHHHHHCCHHH-HHHCEEEEEECSSSEEEEEEE--TTEEE---EEEEESCCHHH
T ss_pred HHHHHHHHHHHHHcCCcEEEEEEHHHHHHHHhhcccc-ccCCEEEEEECCCcEEEEEEE--CCEEE---EEEecccHHHH
Confidence 4566889999999999999999999999998865443 556799999999999999987 44432 23458999999
Q ss_pred HHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHhcCC-----cceEEEEEecCCceeEEEEeHHHHHHHHHHHHHHH
Q psy8852 354 FDYCLFSWIVKNAFLKKLSYKDVNILMIKSREIKELLSYQ-----SSVKLNVKLSDKKIVNITIDMKQFFTITQHLVNRT 428 (634)
Q Consensus 354 id~~l~~~l~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~-----~~~~i~i~~~~g~~~~~~itr~~~e~~~~~~~~~~ 428 (634)
||+.|...+. .....||++|+.++.. ....+.++..+| .....++|++|.++++|.++++
T Consensus 241 it~dIa~~l~--------------~~~~~AE~iK~~~g~a~~~~~~~~~i~v~~~~~-~~~~~is~~~l~~ii~p~veei 305 (419)
T 4a2a_A 241 VIKDVSAVLD--------------TSFEESERLIITHGNAVYNDLKEEEIQYRGLDG-NTIKTTTAKKLSVIIHARLREI 305 (419)
T ss_dssp HHHHHHHHHT--------------CCHHHHHHHHHHHCCSCCTTCCCCEEEEECTTS-CSEEEEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHC--------------CCHHHHHHHHHHhccCcccCCCCceEEEeecCC-ccceEEcHHHHHHHHHHHHHHH
Confidence 9999986432 2347899999998753 345677765443 4678999999999999999999
Q ss_pred HHHHHHHHHHcCC------CcCCCCeEEEEcCCcCcHHHHHHHHhhccCCcC--C-----C----------CChhhHHHH
Q psy8852 429 ILLSSKALMDANL------TIKDINNVILVGGSTRMKHIHEGVSNFFKTTLL--T-----S----------IDPDKAVVF 485 (634)
Q Consensus 429 ~~~i~~~l~~~~~------~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~~--~-----~----------~~p~~ava~ 485 (634)
.+.+++.|+.++. ....++.|+|+||+|++|.+++.+++.||.++. . + .+|..++|.
T Consensus 306 ~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~g~~vri~~~~~~~p~~~~~~~~~~~~P~~~t~~ 385 (419)
T 4a2a_A 306 MSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVFKSPVRTGCYANSDRPSIINADEVANDPSFAAAF 385 (419)
T ss_dssp HHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHHTSCEEECCGGGSSSCCCBTCHHHHTCGGGHHHH
T ss_pred HHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHHCCCeEEEecCCCCchhccCcccccCCchHHHHH
Confidence 9999999999987 345689999999999999999999999987653 2 1 489999999
Q ss_pred HHHHHHhH
Q psy8852 486 GAAIQANF 493 (634)
Q Consensus 486 GAa~~a~~ 493 (634)
|.++++..
T Consensus 386 Gl~~~~~~ 393 (419)
T 4a2a_A 386 GNVFAVSE 393 (419)
T ss_dssp HTTCC---
T ss_pred HHHHHHhh
Confidence 99998764
No 18
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=99.94 E-value=6.3e-26 Score=203.74 Aligned_cols=129 Identities=42% Similarity=0.686 Sum_probs=123.7
Q ss_pred EeeeccccceEEEecceeeEEeeCCCccCcceeeeeEeeccCceEEEEEEEecCccccccCceeeEEEEeCCCCCCCCcc
Q psy8852 506 LLDVIPLSLGIETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVKNCQVLANFELRDIPPMPAGRA 585 (634)
Q Consensus 506 ~~~~~~~~~gi~~~~~~~~~li~~g~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~~~~~~~g~~ 585 (634)
+.|++|+++||++.+|.|.+|||||+++|++++..|++..|+|+.+.|.+|||++....+|..||+|.|.++|+.|+|.+
T Consensus 2 ~~DV~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (151)
T 3dqg_A 2 NADVTPLSLGIETLGGIMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKVFQGEREMATSNKLLGQFSLVGIPPAPRGVP 81 (151)
T ss_dssp --CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCS
T ss_pred cceeeeeEEEEEEcCCEEEEEEECcCccCEEEEEEEEECCCCcceEEEEEEEcCCcccccCcEEEEEEEeCCCCCCCCCc
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEECCCeeEEEEEEEecCCeEEEEEEecCCCCCHHHHHHhhhcC
Q psy8852 586 RIKVTYQVDADGLLSIFAYEKISGKKKFITIKPFYNMNLDEIKSNLKDK 634 (634)
Q Consensus 586 ~i~v~~~~d~~g~l~v~~~~~~~g~~~~~~i~~~~~~~~~ei~~~~~~~ 634 (634)
+|+|+|.+|.+|+|+|++.++.+|++.+++|.++.+||++||++|++++
T Consensus 82 ~IeVtf~iD~nGiL~Vsa~d~~tg~~~~i~I~~~~~Ls~~ei~~~~~~a 130 (151)
T 3dqg_A 82 QVEVTFDIDANGIVNVSARDRGTGKEQQIVIQSSGGLSKDQIENMIKEA 130 (151)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTCCEEEEEEECSSSSCHHHHHHHHHHH
T ss_pred EEEEEEEeccCcEEEEEEEEccCCCEeEEEEecCCCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999998899999999999874
No 19
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=99.93 E-value=1.1e-25 Score=202.53 Aligned_cols=129 Identities=40% Similarity=0.666 Sum_probs=120.7
Q ss_pred EeeeccccceEEEecceeeEEeeCCCccCcceeeeeEeeccCceEEEEEEEecCccccccCceeeEEEEeCCCCCCCCcc
Q psy8852 506 LLDVIPLSLGIETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVKNCQVLANFELRDIPPMPAGRA 585 (634)
Q Consensus 506 ~~~~~~~~~gi~~~~~~~~~li~~g~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~~~~~~~g~~ 585 (634)
+.|++|+++||++.+|.|.+||+||+++|++++..|++..|+|+.+.|.+|||++....+|..||+|.|.++|+.|+|.+
T Consensus 2 ~~Dv~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (152)
T 3dob_A 2 NADVAPLSLGIETAGGVMTNLIDRNTRIPTKACKTFTTYADNQPGVSIQVYEGERAMTRDNHRLGTFELSGIPPAPRGVP 81 (152)
T ss_dssp --CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCC
T ss_pred ceeeecceEEEEEcCCEEEEEEECcCccCEEEEEEEEECCCCceEEEEEEEEcCccccccCceeEEEEEeCCCCCCCCCc
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEECCCeeEEEEEEEecCCeEEEEEEecCCC-CCHHHHHHhhhcC
Q psy8852 586 RIKVTYQVDADGLLSIFAYEKISGKKKFITIKPFYN-MNLDEIKSNLKDK 634 (634)
Q Consensus 586 ~i~v~~~~d~~g~l~v~~~~~~~g~~~~~~i~~~~~-~~~~ei~~~~~~~ 634 (634)
+|+|+|.+|.+|+|+|++.++.||++.+++|.++.+ ||++||++|++++
T Consensus 82 ~IeVtf~iD~nGiL~Vsa~d~~tg~~~~i~I~~~~~~Ls~~ei~~~~~~a 131 (152)
T 3dob_A 82 QIEVTFNIDANGILNVSAEDKSTGKSNRITIQNEKGRLTQSDIDRMVHEA 131 (152)
T ss_dssp CEEEEEEECTTCCEEEEEEETTTCCEEEEEECCC----CHHHHHHHHHHH
T ss_pred eEEEEEEeCCCCeEEEEEEEcCCCCEEEEEEEcCCCCCCHHHHHHHHHHH
Confidence 999999999999999999999999999999988765 9999999999874
No 20
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=99.93 E-value=9.3e-26 Score=241.34 Aligned_cols=304 Identities=17% Similarity=0.207 Sum_probs=207.6
Q ss_pred eEEEEEeCCceEEEEEEECCeeEEEecCCCCccccEEEEEecCC-----------------cEEecHhHHhhhccCCCch
Q psy8852 134 VSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPDG-----------------KIYVGKKAKITQNIDPKNT 196 (634)
Q Consensus 134 ~vvGID~GTt~s~va~~~~g~~~vi~~~~g~~~~Ps~v~~~~~~-----------------~~~~G~~A~~~~~~~~~~~ 196 (634)
..||||+||+++++++..++.|.++ +||+|+...+. ..++|.+|... +.
T Consensus 6 ~~ivID~Gs~~~k~G~~~~~~p~~~--------~Ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~a~~~----~~-- 71 (418)
T 1k8k_A 6 PACVVDCGTGYTKLGYAGNTEPQFI--------IPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIEK----PT-- 71 (418)
T ss_dssp CCEEEEECSSEEEEEETTCSSCSEE--------EESCEEECC-----------CCCTTGGGCEEEGGGGTSC----TT--
T ss_pred CeEEEECCCCeEEEeeCCCCCCCCc--------CCceEEEECcccccccccccccccccccCeEEChHHHhc----CC--
Confidence 3589999999999998765555433 67888765331 25666666432 10
Q ss_pred hhhhhhhcCCCCCCcccCCCCeEEecCCCceEEEecCcccCHHhHHHHHHHHHHHHHHHHhCC--CcCcEEEEeCCCCCH
Q psy8852 197 ISSIKRFIARDLKNINTNSFPYDFQNKFGMLHIKTISGIKSPIEISAQIFITLKKIAENAVNN--RIFGAVITVPAYFND 274 (634)
Q Consensus 197 i~~~k~~lg~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~--~~~~~viTVPa~~~~ 274 (634)
..++ .| ..++.+.-.+.+..+++++.. +.++. ....++||+|++|+.
T Consensus 72 -~~~~--------------~p-------------i~~G~i~d~d~~e~i~~~~~~---~~L~~~~~~~~vvit~p~~~~~ 120 (418)
T 1k8k_A 72 -YATK--------------WP-------------IRHGIVEDWDLMERFMEQVIF---KYLRAEPEDHYFLLTEPPLNTP 120 (418)
T ss_dssp -SEEE--------------CC-------------EETTEESCHHHHHHHHHHHHH---TTTCCCGGGCCEEEEECTTCCH
T ss_pred -CEEe--------------cc-------------ccCCEECCHHHHHHHHHHHHH---hccCCCCCCCcEEEEeCCCCCH
Confidence 0011 11 122344445566666666653 22332 245799999999999
Q ss_pred HHHHHHHHHH-HHcCCceeeeecchhHHHHH-hhh---ccCccceEEEEEEeCCCeEEEEEEEEeCCeEEEEEEcCCCCc
Q psy8852 275 IQRQFTKNAA-KLAGLNVLRLLNEPTSAAIA-YKL---DKNIFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNL 349 (634)
Q Consensus 275 ~qr~~l~~aa-~~aGl~~~~li~Ep~AAa~~-y~~---~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~l 349 (634)
.+|++|.+++ +.+|++.+.+++||+||+++ |.. ... .. +.+|+|+|+||||++++. ++.. +....+..++
T Consensus 121 ~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~~~~~~~-~~-~glVvDiG~gtt~v~~v~--~G~~-~~~~~~~~~l 195 (418)
T 1k8k_A 121 ENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGER-TL-TGTVIDSGDGVTHVIPVA--EGYV-IGSCIKHIPI 195 (418)
T ss_dssp HHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGSTTCCSC-CC-CEEEEEESSSCEEEEEEE--TTEE-CGGGCEEESC
T ss_pred HHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcccccCCC-CC-eEEEEEcCCCceEEEEeE--CCEE-cccceEEEeC
Confidence 9999999999 88999999999999999987 421 111 22 569999999999999885 3432 2222356789
Q ss_pred cchhHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHhcCCcc-----------------eEEEEEe-cCCceeEEE
Q psy8852 350 GGDDFDYCLFSWIVKNAFLKKLSYKDVNILMIKSREIKELLSYQSS-----------------VKLNVKL-SDKKIVNIT 411 (634)
Q Consensus 350 GG~~id~~l~~~l~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~-----------------~~i~i~~-~~g~~~~~~ 411 (634)
||+++|+.|.+++.+++..- +.. .-...+|++|+.++.... ..+.++. ..+....++
T Consensus 196 GG~~lt~~l~~~l~~~~~~~--~~~---~~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~~lpd~~~~~~~~i~ 270 (418)
T 1k8k_A 196 AGRDITYFIQQLLRDREVGI--PPE---QSLETAKAVKERYSYVCPDLVKEFNKYDTDGSKWIKQYTGINAISKKEFSID 270 (418)
T ss_dssp SHHHHHHHHHHHHHTTCCCC--CGG---GHHHHHHHHHHHHCCCCSCHHHHHHHHHHSGGGTCEEEEEECTTTCCEEEEE
T ss_pred cHHHHHHHHHHHHHhcCCCC--CCH---HHHHHHHHHHHhhchhcccHHHHHHhhcccccccceeEECCCCCCCcccEEE
Confidence 99999999999998764311 100 112567888888764321 2344432 234566889
Q ss_pred EeHHHH---HHHHHHH------HHHHHHHHHHHHHHcCCC--cCCCCeEEEEcCCcCcHHHHHHHHhhccC---------
Q psy8852 412 IDMKQF---FTITQHL------VNRTILLSSKALMDANLT--IKDINNVILVGGSTRMKHIHEGVSNFFKT--------- 471 (634)
Q Consensus 412 itr~~~---e~~~~~~------~~~~~~~i~~~l~~~~~~--~~~i~~ViLvGG~s~~p~v~~~l~~~f~~--------- 471 (634)
++++.| |.++.|. +..+.++|.++|..+..+ ...++.|+|+||+|++|.++++|++.++.
T Consensus 271 l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~~~~~~~~l~~~IvL~GG~s~~pg~~~rl~~el~~~~~~~~~~~ 350 (418)
T 1k8k_A 271 VGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLS 350 (418)
T ss_dssp ECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHHCEEEESGGGCSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred eChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcCCHHHHHHHHhceEEeCCccccccHHHHHHHHHHHhhccccccc
Confidence 999998 4554443 256888899999887533 34468899999999999999999876532
Q ss_pred ---------------CcCCCCChhhHHHHHHHHHHh
Q psy8852 472 ---------------TLLTSIDPDKAVVFGAAIQAN 492 (634)
Q Consensus 472 ---------------~~~~~~~p~~ava~GAa~~a~ 492 (634)
++..+.+|..++.+||+++|.
T Consensus 351 ~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilas 386 (418)
T 1k8k_A 351 EELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLAS 386 (418)
T ss_dssp HHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTT
T ss_pred cccccccCCCCceeEEEeCCCccccceeHhHHHHHc
Confidence 123356788999999999986
No 21
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=99.93 E-value=2.1e-25 Score=201.07 Aligned_cols=129 Identities=41% Similarity=0.613 Sum_probs=123.6
Q ss_pred EeeeccccceEEEecceeeEEeeCCCccCcceeeeeEeeccCceEEEEEEEecCccccccCceeeEEEEeCCCCCCCCcc
Q psy8852 506 LLDVIPLSLGIETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVKNCQVLANFELRDIPPMPAGRA 585 (634)
Q Consensus 506 ~~~~~~~~~gi~~~~~~~~~li~~g~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~~~~~~~g~~ 585 (634)
+.|++|+++||++.+|.|.+||+||+++|++++..|++..|+|+.+.|.+|||++..+.+|..||+|.|.++|+.|+|.+
T Consensus 2 ~~Dv~p~slGi~~~gg~~~~lI~rnt~iP~~k~~~f~t~~d~Q~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (152)
T 3h0x_A 2 NADVNALTLGIETTGGVMTPLIKRNTAIPTKKSQIFSTAVDNQPTVMIKVYEGERAMSKDNNLLGKFELTGIPPAPRGVP 81 (152)
T ss_dssp -CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCS
T ss_pred ccceeccEEEEEEcCCEEEEEEECcCccCEEEEEEEEeCCCCcceeeeeEEEcCccccccCcEEEEEEEeCCCCCCCCCc
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEECCCeeEEEEEEEecCCeEEEEEEecC-CCCCHHHHHHhhhcC
Q psy8852 586 RIKVTYQVDADGLLSIFAYEKISGKKKFITIKPF-YNMNLDEIKSNLKDK 634 (634)
Q Consensus 586 ~i~v~~~~d~~g~l~v~~~~~~~g~~~~~~i~~~-~~~~~~ei~~~~~~~ 634 (634)
+|+|+|.+|.+|+|+|++.++.+|++.+++|.+. .+||++||++|++++
T Consensus 82 ~I~Vtf~iD~nGiL~V~a~d~~tg~~~~i~I~~~~~~ls~~ei~~~~~~a 131 (152)
T 3h0x_A 82 QIEVTFALDANGILKVSATDKGTGKSESITITNDKGRLTQEEIDRMVEEA 131 (152)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTCCEEEEEEECCTTCCCHHHHHHHHHHH
T ss_pred eEEEEEEEcCCCEEEEEEEEcCCCcEeEEEEecCCCCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999887 679999999999874
No 22
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=99.93 E-value=1.4e-25 Score=236.24 Aligned_cols=299 Identities=18% Similarity=0.203 Sum_probs=202.2
Q ss_pred eEEEEEeCCceEEEEEEECCeeEEEecCCCCccccEEEEEecC---------CcEEecHhHHhhhccCCCchhhhhhhhc
Q psy8852 134 VSIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPD---------GKIYVGKKAKITQNIDPKNTISSIKRFI 204 (634)
Q Consensus 134 ~vvGID~GTt~s~va~~~~g~~~vi~~~~g~~~~Ps~v~~~~~---------~~~~~G~~A~~~~~~~~~~~i~~~k~~l 204 (634)
..|+||+||+++++++..++.|.++ +||+++.... ...++|.+|..... . ..++
T Consensus 6 ~~ivID~Gs~~~k~G~~~~~~p~~~--------~ps~v~~~~~~~~~~~~~~~~~~vG~~a~~~~~----~--~~~~--- 68 (375)
T 2fxu_A 6 TALVCDNGSGLVKAGFAGDDAPRAV--------FPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG----I--LTLK--- 68 (375)
T ss_dssp CCEEEEECSSEEEEEETTCSSCSEE--------EECCEEEECTTTC-------CCEEHHHHHHHTT----S--EEEE---
T ss_pred ceEEEECCCCeEEEEECCCCCCcee--------eccccccccccccccCCCCCCeEechhHhhcCc----c--ccee---
Confidence 3589999999999999776665433 5666665432 23678988865310 0 0011
Q ss_pred CCCCCCcccCCCCeEEecCCCceEEEecCcccCHHhHHHHHHHHHHHHHHHHhCCC--cCcEEEEeCCCCCHHHHHHHHH
Q psy8852 205 ARDLKNINTNSFPYDFQNKFGMLHIKTISGIKSPIEISAQIFITLKKIAENAVNNR--IFGAVITVPAYFNDIQRQFTKN 282 (634)
Q Consensus 205 g~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~--~~~~viTVPa~~~~~qr~~l~~ 282 (634)
.| ..++.+.-.+.+..+++++.. +.++.. ...+++|+|++++..+|+++.+
T Consensus 69 -----------~P-------------i~~G~i~d~d~~e~i~~~~~~---~~L~~~~~~~~vvit~p~~~~~~~r~~~~e 121 (375)
T 2fxu_A 69 -----------YP-------------IEHGIITNWDDMEKIWHHTFY---NELRVAPEEHPTLLTEAPLNPKANREKMTQ 121 (375)
T ss_dssp -----------CS-------------EETTEECCHHHHHHHHHHHHH---TTSCCCGGGSCEEEEECTTCCHHHHHHHHH
T ss_pred -----------cc-------------ccCCcccCHHHHHHHHHHHHH---HhcCCCCcCCcEEEEeCCCCcHHHHHHHHH
Confidence 11 123344555667777777763 223332 3469999999999999998887
Q ss_pred H-HHHcCCceeeeecchhHHHHHhhhccCccceEEEEEEeCCCeEEEEEEEEeCCeEEEEEEcCCCCccchhHHHHHHHH
Q psy8852 283 A-AKLAGLNVLRLLNEPTSAAIAYKLDKNIFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSW 361 (634)
Q Consensus 283 a-a~~aGl~~~~li~Ep~AAa~~y~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~ 361 (634)
+ .+.+|++.+.+++||+|||++++.. +.+|+|+|+||||++.+ .+|. .+....+..++||+++|+.|.++
T Consensus 122 ~~fe~~g~~~~~~~~e~~aaa~a~g~~------~~lVvDiG~gtt~v~~v--~~G~-~~~~~~~~~~~GG~~lt~~l~~~ 192 (375)
T 2fxu_A 122 IMFETFNVPAMYVAIQAVLSLYASGRT------TGIVLDSGDGVTHNVPI--YEGY-ALPHAIMRLDLAGRDLTDYLMKI 192 (375)
T ss_dssp HHHHTTCCSEEEEEEHHHHHHHHTTCS------SEEEEEECSSCEEEEEE--ETTE-ECGGGCEEESCCHHHHHHHHHHH
T ss_pred HHHHhcCcceEEEccchheeeeecCCC------eEEEEEcCCCceEEeEe--ECCE-EeccceEEeccCHHHHHHHHHHH
Confidence 6 5788999999999999999998753 46999999999998765 3453 22222345789999999999999
Q ss_pred HHHHHhhccCCHHHHHHHHHHHHHHHHHhcCCc--------------ceEEEEEecCCceeEEEEeHHHHH---HHHHHH
Q psy8852 362 IVKNAFLKKLSYKDVNILMIKSREIKELLSYQS--------------SVKLNVKLSDKKIVNITIDMKQFF---TITQHL 424 (634)
Q Consensus 362 l~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~--------------~~~i~i~~~~g~~~~~~itr~~~e---~~~~~~ 424 (634)
+..+.. ...... -...+|++|+.++... .....+++.+|. .++++++.|. .+++|.
T Consensus 193 l~~~~~-~~~~~~----~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~lpdg~--~i~i~~erf~~~E~lf~p~ 265 (375)
T 2fxu_A 193 LTERGY-SFVTTA----EREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQ--VITIGNERFRCPETLFQPS 265 (375)
T ss_dssp HHHHTC-CCCSHH----HHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEECTTSC--EEEESTHHHHHHHTTTCGG
T ss_pred HHhcCC-CCCcHH----HHHHHHHHHHHHHhhcccHHHHHHhhcccCccCeEEECCCCC--EEEEChhheechHhhCCCc
Confidence 987621 111000 1234555565553221 112334455554 4677888773 334442
Q ss_pred -----HHHHHHHHHHHHHHcCC--CcCCCCeEEEEcCCcCcHHHHHHHHhhcc--------CCcCCCCChhhHHHHHHHH
Q psy8852 425 -----VNRTILLSSKALMDANL--TIKDINNVILVGGSTRMKHIHEGVSNFFK--------TTLLTSIDPDKAVVFGAAI 489 (634)
Q Consensus 425 -----~~~~~~~i~~~l~~~~~--~~~~i~~ViLvGG~s~~p~v~~~l~~~f~--------~~~~~~~~p~~ava~GAa~ 489 (634)
...+.++|.++|.++.. ....++.|+|+||+|++|.++++|++.++ .++..+.+|..++++||++
T Consensus 266 ~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~rl~~el~~~~p~~~~v~v~~~~~p~~~~w~G~si 345 (375)
T 2fxu_A 266 FIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSI 345 (375)
T ss_dssp GGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHHHHHHHHHHSCTTCCCCEECCTTTTSHHHHHHHH
T ss_pred cCCCCCCCHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHHHHHHHHHhCCCCeeEEEEcCCCCCccEEcchHH
Confidence 24577888888886642 22335789999999999999999998875 3344578999999999999
Q ss_pred HHh
Q psy8852 490 QAN 492 (634)
Q Consensus 490 ~a~ 492 (634)
+|.
T Consensus 346 ~a~ 348 (375)
T 2fxu_A 346 LAS 348 (375)
T ss_dssp HHH
T ss_pred hhC
Confidence 987
No 23
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens}
Probab=99.93 E-value=2.5e-25 Score=205.57 Aligned_cols=134 Identities=42% Similarity=0.666 Sum_probs=123.6
Q ss_pred CCceeEeeeccccceEEEecceeeEEeeCCCccCcceeeeeEeeccCceEEEEEEEecCccccccCceeeEEEEeCCCCC
Q psy8852 501 DDNFLLLDVIPLSLGIETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVKNCQVLANFELRDIPPM 580 (634)
Q Consensus 501 ~~~~~~~~~~~~~~gi~~~~~~~~~li~~g~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~~~~~ 580 (634)
+..+.+.|++|+++||++.+|.|.+|||||+++|++++..|++..|+|+.+.|.+|||++....+|..||+|.|.++|+.
T Consensus 17 ~~~f~l~DV~P~slGie~~gg~~~~lI~rnt~iP~~k~~~f~T~~DnQ~~v~I~VyqGE~~~~~dn~~LG~f~l~gipp~ 96 (182)
T 3n8e_A 17 NLYFQSMDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVCQGEREMAGDNKLLGQFTLIGIPPA 96 (182)
T ss_dssp -------CBCSSCEEEECTTSBEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCC
T ss_pred CCCEEEEEecCCEEEEEEeCCEEEEEEeCCCccCEEEEEEEEECCCCccEEEEEEEEcCccccccCceEEEEEEcCCCCC
Confidence 35788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccEEEEEEEECCCeeEEEEEEEecCCeEEEEEEecCCCCCHHHHHHhhhcC
Q psy8852 581 PAGRARIKVTYQVDADGLLSIFAYEKISGKKKFITIKPFYNMNLDEIKSNLKDK 634 (634)
Q Consensus 581 ~~g~~~i~v~~~~d~~g~l~v~~~~~~~g~~~~~~i~~~~~~~~~ei~~~~~~~ 634 (634)
|+|.++|+|+|.+|.+|+|+|++.++++|++.+++|.++.+||++||++|++++
T Consensus 97 p~G~~~IeVtf~iD~nGiL~VsA~d~~tg~~~~i~I~~~~~Ls~eei~~mi~~a 150 (182)
T 3n8e_A 97 PRGVPQIEVTFDIDANGIVHVSAKDKGTGREQQIVIQSSGGLSKDDIENMVKNA 150 (182)
T ss_dssp CTTCSCEEEEEEECTTCCEEEEEEETTTCCEEEEEESCCCCCCHHHHHHHHHHH
T ss_pred CCCCeeEEEEEEEecCCEEEEEEEEcCCCCEeeEEEecCccCCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999988899999999999874
No 24
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=99.93 E-value=3.1e-25 Score=212.30 Aligned_cols=130 Identities=48% Similarity=0.726 Sum_probs=126.0
Q ss_pred eEeeeccccceEEEecceeeEEeeCCCccCcceeeeeEeeccCceEEEEEEEecCccccccCceeeEEEEeCCCCCCCCc
Q psy8852 505 LLLDVIPLSLGIETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVKNCQVLANFELRDIPPMPAGR 584 (634)
Q Consensus 505 ~~~~~~~~~~gi~~~~~~~~~li~~g~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~~~~~~~g~ 584 (634)
++.|++|+++||++.+|.|.+|||||++||++++..|++..|+|+.+.|.||||++....+|..||+|.|.++|++|+|.
T Consensus 2 ~l~DV~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~Lg~f~l~gipp~p~G~ 81 (219)
T 4e81_A 2 LLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGM 81 (219)
T ss_dssp CCCCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCSTTC
T ss_pred eEEEecCcEEEEEEeCCEEEEEEeCcCcccEeEEEEEEeCCCCCceEEEEEEEcCCcccccCCEEEEEEEeCCCCCCCCC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEEEEECCCeeEEEEEEEecCCeEEEEEEecCCCCCHHHHHHhhhcC
Q psy8852 585 ARIKVTYQVDADGLLSIFAYEKISGKKKFITIKPFYNMNLDEIKSNLKDK 634 (634)
Q Consensus 585 ~~i~v~~~~d~~g~l~v~~~~~~~g~~~~~~i~~~~~~~~~ei~~~~~~~ 634 (634)
++|+|+|.+|.||+|+|++.+++||++.+++|+++.+||++||++|++++
T Consensus 82 ~~IeVtf~iD~nGiL~V~a~d~~tg~~~~i~I~~~~~Ls~eeI~~m~~~a 131 (219)
T 4e81_A 82 PQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRDA 131 (219)
T ss_dssp SCEEEEEEECTTCCEEEEEEETTTCCEEEEEECTTCSCCHHHHHHHHHHH
T ss_pred ceEEEEEEeCCCCCEeeeeeccccCccceEeeeccccccHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999864
No 25
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.91 E-value=5.9e-25 Score=202.93 Aligned_cols=103 Identities=32% Similarity=0.500 Sum_probs=91.0
Q ss_pred CCCCccccC------CCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCChhhHHHHHHHHHHHHHHHHHcCChhhhHHHHHH
Q psy8852 1 MKNYFDFFN------LPKCFNIDMDLLDKIYYNFQKKIHPDNFIQKSKIDQDASVKLSTYLNKAYSILKDPFLRSIYLCK 74 (634)
Q Consensus 1 ~~~~~~~l~------~~~~~~~~~~~i~~~y~~~~~~~HPD~~~~~~~~~~~~~~~~~~~i~~Ay~~L~d~~~r~~y~~~ 74 (634)
|+|||++|| +|+ ++++.++||++||+|+++|||||+++ +.++|++||+||++|+||.+|+.|++.
T Consensus 10 ~~d~y~ll~~~~p~~~~~-~~a~~~eIk~aYr~la~~~HPDk~~~--------a~~~f~~i~~AY~vL~dp~~R~~Yd~~ 80 (181)
T 3uo3_A 10 TSTFYELFPKTFPKKLPI-WTIDQSRLRKEYRQLQAQHHPDMAQQ--------GSEQSSTLNQAYHTLKDPLRRSQYMLK 80 (181)
T ss_dssp SCCTGGGCTTTCTTCSCC-SCCCHHHHHHHHHHHHHTCCTTSCCS--------CSSGGGSHHHHHHHHHSHHHHHHHHHH
T ss_pred CCCHHHHhccccccCCCC-CCCCHHHHHHHHHHHHHHhCcCCCcc--------HHHHHHHHHHHHHHHcChHHHHHHHHH
Confidence 679999995 555 88999999999999999999999875 346788999999999999999999999
Q ss_pred h-cCCCCcccc----ccCCCHHHHHHHHHHHHHHHHHhhcchh
Q psy8852 75 L-NGIDLNTKL----NLNFSHDFLEQQMKWRETLSIIKNKKDK 112 (634)
Q Consensus 75 l-~~~~~~~~~----~~~~~~~~l~~~~e~~e~~~~~~~~~~~ 112 (634)
| +|.++.++. ++..|++|||++|||+|+|+++++..+.
T Consensus 81 l~~g~~~~~e~~~~~~~~~d~~fLme~me~rE~leea~~~~~l 123 (181)
T 3uo3_A 81 LLRNIDLTQEQTSNEVTTSDPQLLLKVLDIHDELSQMDDEAGV 123 (181)
T ss_dssp HHHCCCTTSHHHHHHHHHTCHHHHHHHHHHHHHHHHCCSHHHH
T ss_pred HHhCCCccccccccccccCCHHHHHHHHHHHHHHHhccCHHHH
Confidence 9 999988765 5778999999999999999998754443
No 26
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=99.90 E-value=2.2e-23 Score=189.19 Aligned_cols=128 Identities=39% Similarity=0.646 Sum_probs=122.2
Q ss_pred EeeeccccceEEEecceeeEEeeCCCccCcceeeeeEeeccCceEEEEEEEecCccccccCceeeEEEEeCCCCCCCCcc
Q psy8852 506 LLDVIPLSLGIETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVKNCQVLANFELRDIPPMPAGRA 585 (634)
Q Consensus 506 ~~~~~~~~~gi~~~~~~~~~li~~g~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~~~~~~~g~~ 585 (634)
+.|++|++|||++.+|.|.+||+||++||++++..|++..|+|+.+.|.+|||++....+|..||+|.|.++|+.|+|.+
T Consensus 2 v~Dv~p~slGi~~~~g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~lg~~~l~gipp~p~G~~ 81 (152)
T 2op6_A 2 NADVNPLTLGIETVGGVMTKLIGRNTVIPTKKSQVFSTAADSQSAVSIVIYEGERPMVMDNHKLGNFDVTGIPPAPRGVP 81 (152)
T ss_dssp -CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCS
T ss_pred ceEeecccEEEEEeCCEEEEEEeCCCcccEeEEEEEEeCCCCCcEEEEEEEEeCCccCccCCEeEEEEEECCCCCCCCCc
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEECCCeeEEEEEEEecCCeEEEEEEecC-CCCCHHHHHHhhhc
Q psy8852 586 RIKVTYQVDADGLLSIFAYEKISGKKKFITIKPF-YNMNLDEIKSNLKD 633 (634)
Q Consensus 586 ~i~v~~~~d~~g~l~v~~~~~~~g~~~~~~i~~~-~~~~~~ei~~~~~~ 633 (634)
+|+|+|++|.+|+|+|++.++.+|++..++|..+ .+||++||++|+++
T Consensus 82 ~I~V~f~id~nGiL~V~a~d~~tg~~~~i~i~~~~~~ls~eei~~~~~~ 130 (152)
T 2op6_A 82 QIEVTFEIDVNGILHVSAEDKGTGNKNKLTITNDHNRLSPEDIERMIND 130 (152)
T ss_dssp CEEEEEEECTTSCEEEEEEETTTCCEEEEEECSSSSCCCHHHHHHHHHH
T ss_pred eEEEEEEECCCcEEEEEEEEecCCcEEEEEeeccccCCCHHHHHHHHHH
Confidence 9999999999999999999999999999999887 46999999999886
No 27
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=99.89 E-value=1.7e-23 Score=215.43 Aligned_cols=226 Identities=16% Similarity=0.147 Sum_probs=150.1
Q ss_pred ccCHHhHHHHHHHHHHHHHHHHhCCCcCcEEEEeCCC-CCHH--HH--HHHHHH------------HHHcCCceeeeecc
Q psy8852 235 IKSPIEISAQIFITLKKIAENAVNNRIFGAVITVPAY-FNDI--QR--QFTKNA------------AKLAGLNVLRLLNE 297 (634)
Q Consensus 235 ~~~~~~v~~~~L~~l~~~a~~~~~~~~~~~viTVPa~-~~~~--qr--~~l~~a------------a~~aGl~~~~li~E 297 (634)
.+++..+++.+ ..|+. +.. .+.+ ..+|+++|.. |... |+ +++.+- ++.+++..+.+++|
T Consensus 73 ~~~~~~l~~i~-~aL~~-~~~-~~~~-~~lv~glP~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~e 148 (320)
T 2zgy_A 73 QYSDVNVVAVH-HALLT-SGL-PVSE-VDIVCTLPLTEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKVMPE 148 (320)
T ss_dssp GGSHHHHHHHH-HHHHH-HSC-CSCE-EEEEEEECHHHHBCTTSSBCHHHHHHHHHHTTSCEEETTBCCCEEEEEEEEES
T ss_pred cchHHHHHHHH-HHHHH-cCC-CCce-EEEEEcCCHHHHccCCCcccHHHHHHHHHhhcCcEecCCCcEEEEEEEEEecC
Confidence 56666666543 44442 211 1222 3699999987 6431 21 222211 23445678899999
Q ss_pred hhHHHHHhhhccCccceEEEEEEeCCCeEEEEEEEEeCCeEEEEEEcCCCCccchhHHHHHHHHHHHHHhhccCCHHHHH
Q psy8852 298 PTSAAIAYKLDKNIFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWIVKNAFLKKLSYKDVN 377 (634)
Q Consensus 298 p~AAa~~y~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~ 377 (634)
|.||+++|..... .+..++|+|+||||||+++++ ++...+....++.++||.+||+.|.+++.++ +... +.
T Consensus 149 ~~aa~~~~~~~~~-~~~~~~vvDiGggttd~~v~~--~g~~~v~~~~~~~~lGg~~~~~~I~~~l~~~-~~~i-~~---- 219 (320)
T 2zgy_A 149 SIPAGYEVLQELD-ELDSLLIIDLGGTTLDISQVM--GKLSGISKIYGDSSLGVSLVTSAVKDALSLA-RTKG-SS---- 219 (320)
T ss_dssp SHHHHHHHHHHSC-TTCEEEEEEECSSCEEEEEEE--GGGCCEEEEEEECSCCTHHHHHHHHHHTTCC-SBGG-GH----
T ss_pred cHHHHHhhhcccc-CCCCEEEEEcCCCeEEEEEEe--CCeeEEeeecCCccccHHHHHHHHHHHHHHc-CCCC-CH----
Confidence 9999998874433 567899999999999999997 4444456667778999999999999988753 2211 11
Q ss_pred HHHHHHHHH-HHHhcCCcceEEEEEecCCceeEEEEeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCc
Q psy8852 378 ILMIKSREI-KELLSYQSSVKLNVKLSDKKIVNITIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGST 456 (634)
Q Consensus 378 ~L~~~~e~~-K~~Ls~~~~~~i~i~~~~g~~~~~~itr~~~e~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s 456 (634)
..+|++ |..- .. ...+..+...-+.+++.+++++.++++.+.+.+.+++. .+++.|+|+||+|
T Consensus 220 ---~~ae~~lk~~~---~~------~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~i~~~i~~~----~~~~~vvl~GGga 283 (320)
T 2zgy_A 220 ---YLADDIIIHRK---DN------NYLKQRINDENKISIVTEAMNEALRKLEQRVLNTLNEF----SGYTHVMVIGGGA 283 (320)
T ss_dssp ---HHHHHHHHTTT---CH------HHHHHHSSSSCTHHHHHHHHHHHHHHHHHHHHHHHTTC----CCCCEEEEESTTH
T ss_pred ---HHHHHHHHHhh---hh------hcccceecCchhhHHHHHHHHHHHHHHHHHHHHHHHhh----cCCCeEEEECChH
Confidence 233433 3220 00 00000000001345666777777777777777777652 4689999999999
Q ss_pred CcHHHHHHHHhhccC---CcCCCCChhhHHHHHHHHHH
Q psy8852 457 RMKHIHEGVSNFFKT---TLLTSIDPDKAVVFGAAIQA 491 (634)
Q Consensus 457 ~~p~v~~~l~~~f~~---~~~~~~~p~~ava~GAa~~a 491 (634)
++ +++.|++.|+. ++....||++|+|.||++++
T Consensus 284 ~l--l~~~l~~~~~~~~~~~~~~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 284 EL--ICDAVKKHTQIRDERFFKTNNSQYDLVNGMYLIG 319 (320)
T ss_dssp HH--HHHHHHHTSCCCGGGEECCSCGGGHHHHHHHHHH
T ss_pred HH--HHHHHHHHhCCCCCceeeCCCcHHHHHHHHHHhc
Confidence 87 99999999987 57778999999999999876
No 28
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=99.88 E-value=4.1e-22 Score=192.75 Aligned_cols=127 Identities=61% Similarity=0.938 Sum_probs=122.6
Q ss_pred eeeccccceEEEecceeeEEeeCCCccCcceeeeeEeeccCceEEEEEEEecCccccccCceeeEEEEeCCCCCCCCccE
Q psy8852 507 LDVIPLSLGIETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVKNCQVLANFELRDIPPMPAGRAR 586 (634)
Q Consensus 507 ~~~~~~~~gi~~~~~~~~~li~~g~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~~~~~~~g~~~ 586 (634)
.|++|+++||++.+|.|.+||+||+++|++++..|++..|+|+.+.|.+|||++..+.+|..||+|.|.++|+.|.|.++
T Consensus 1 ~Dv~p~slGie~~~g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~Lg~f~l~gi~~~p~G~~~ 80 (227)
T 1u00_A 1 MDVIPLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDCRSLARFALRGIPALPAGGAH 80 (227)
T ss_dssp CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEECSSTTCCCEEEEEEECSSSBGGGSEEEEEEEECCCCCCSTTCSC
T ss_pred CCcccceEEEEEeCCEEEEEEeCcCccCceEEEEEEecCCCceEEEEEEEecCCccCCCCCEEEEEEEeCCCCCCCCceE
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEECCCeeEEEEEEEecCCeEEEEEEecCCCCCHHHHHHhhhc
Q psy8852 587 IKVTYQVDADGLLSIFAYEKISGKKKFITIKPFYNMNLDEIKSNLKD 633 (634)
Q Consensus 587 i~v~~~~d~~g~l~v~~~~~~~g~~~~~~i~~~~~~~~~ei~~~~~~ 633 (634)
|+|+|.+|.+|+|+|++.+..+|++.+++|+++.+||++||++|+++
T Consensus 81 I~Vtf~iD~nGiL~V~a~d~~tg~~~~i~i~~~~~Ls~eei~~~~~~ 127 (227)
T 1u00_A 81 IRVTFQVDADGLLSVTAMEKSTGVEASIQVKPSYGLTDSEIASMIKD 127 (227)
T ss_dssp EEEEEEECTTCCEEEEEEETTTCCEEEEEECCCSCCCHHHHHHHHHH
T ss_pred EEEEEEECCCCcEEEEeecccccccceEEEEeccCCCHHHHHHHHHH
Confidence 99999999999999999999999999999998889999999999886
No 29
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=99.87 E-value=5.6e-22 Score=174.87 Aligned_cols=121 Identities=45% Similarity=0.688 Sum_probs=110.7
Q ss_pred CceeEeeeccccceEEEecceeeEEeeCCCccCcceeeeeEeeccCceEEEEEEEecCccccccCceeeEEEEeCCCCCC
Q psy8852 502 DNFLLLDVIPLSLGIETIGGLVEKIIFRNTTIPCSYSGEFTTFKDNQTAIAIKVVQGEDELVKNCQVLANFELRDIPPMP 581 (634)
Q Consensus 502 ~~~~~~~~~~~~~gi~~~~~~~~~li~~g~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~~~~~~ 581 (634)
.++.+.|++|+++||++.++.|.+||+||++||++++..|++..|+|+.+.|.+|||++....+|..||++.|.++|+.|
T Consensus 15 ~d~~l~Dv~p~slGIe~~~g~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~~n~~Lg~f~l~gipp~p 94 (135)
T 1q5l_A 15 RGSHMVDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAP 94 (135)
T ss_dssp ------CCCSSCCCEEETTTEECCSSCSSSCSSBCCEEEECCCSSSCSSCEEEEEECCSSSCSSSEEEEEEECCCCCSCC
T ss_pred CcEEEEEeecCcEEEEEECCEEEEEEcCCCeEeEeEeEEEEeccCCceEEEEEEEEeCCcccccCcEEEEEEEeCCCCCC
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccEEEEEEEECCCeeEEEEEEEecCCeEEEEEEecCCCC
Q psy8852 582 AGRARIKVTYQVDADGLLSIFAYEKISGKKKFITIKPFYNM 622 (634)
Q Consensus 582 ~g~~~i~v~~~~d~~g~l~v~~~~~~~g~~~~~~i~~~~~~ 622 (634)
+|.++|+|+|++|.+|+|+|++.|+.+|++.+++|+++.+|
T Consensus 95 ~G~~~IeVtf~iD~nGiL~V~a~d~~tg~~~~i~i~~~~~l 135 (135)
T 1q5l_A 95 RGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGL 135 (135)
T ss_dssp SSSCCEEEEEEECTTSEEEEEEEETTTCCEEEEEEECSCCC
T ss_pred CceeEEEEEEEECCCCEEEEEEEECCCCCEEEEEEecCCCC
Confidence 99999999999999999999999999999999999887553
No 30
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=99.80 E-value=4.5e-21 Score=202.75 Aligned_cols=298 Identities=18% Similarity=0.193 Sum_probs=92.1
Q ss_pred EEEEEeCCceEEEEEEECCeeEEEecCCCCccccEEEEEecC-----------CcEEecHhHHhhhccCCCchhhhhhhh
Q psy8852 135 SIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPD-----------GKIYVGKKAKITQNIDPKNTISSIKRF 203 (634)
Q Consensus 135 vvGID~GTt~s~va~~~~g~~~vi~~~~g~~~~Ps~v~~~~~-----------~~~~~G~~A~~~~~~~~~~~i~~~k~~ 203 (634)
.|+||+||.++++++..++.|.++ +||+|+.... ...++|.+|..... ...++
T Consensus 8 ~ivID~Gs~~~k~G~ag~~~P~~~--------~Ps~v~~~~~~~~~~~~~~~~~~~~vG~ea~~~~~------~~~~~-- 71 (394)
T 1k8k_B 8 VVVCDNGTGFVKCGYAGSNFPEHI--------FPALVGRPIIRSTTKVGNIEIKDLMVGDEASELRS------MLEVN-- 71 (394)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEECCCCeEEEeeCCCCCccee--------ccceeEEEcccccccccCCCCCCeEEChHHHhcCC------Cceee--
Confidence 589999999999999876665433 5666655322 23557776643210 00000
Q ss_pred cCCCCCCcccCCCCeEEecCCCceEEEecCcccCHHhHHHHHHHHHH-HHHHHHhCCCcCcEEEEeCCCCCHHHHHHHHH
Q psy8852 204 IARDLKNINTNSFPYDFQNKFGMLHIKTISGIKSPIEISAQIFITLK-KIAENAVNNRIFGAVITVPAYFNDIQRQFTKN 282 (634)
Q Consensus 204 lg~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~L~~l~-~~a~~~~~~~~~~~viTVPa~~~~~qr~~l~~ 282 (634)
.|+ .++.+.-.+.+..+++++. ..... ....-..+++|+|+.++..+|+++.+
T Consensus 72 ------------~Pi-------------~~G~i~dwd~~e~i~~~~~~~~~L~-~~~~~~~vllt~p~~~~~~~r~~~~e 125 (394)
T 1k8k_B 72 ------------YPM-------------ENGIVRNWDDMKHLWDYTFGPEKLN-IDTRNCKILLTEPPMNPTKNREKIVE 125 (394)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ------------ccc-------------cCCEEecHHHHHHHHHHHhcccccC-cCCCCCcEEEEECCCCCHHHHHHHHH
Confidence 111 1233344455566666665 21111 01122469999999999999998888
Q ss_pred H-HHHcCCceeeeecchhHHHHHhhhccCccceEEEEEEeCCCeEEEEEEEEeCCeEEEEEEcCCCCccchhHHHHHHHH
Q psy8852 283 A-AKLAGLNVLRLLNEPTSAAIAYKLDKNIFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSW 361 (634)
Q Consensus 283 a-a~~aGl~~~~li~Ep~AAa~~y~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~ 361 (634)
+ .+.+|++.+.++.||.||+++++.. +.+|+|+|+|||+++.+. +|.. +.......++||+++|+.|.++
T Consensus 126 ~~fe~~~~~~~~~~~~~~~a~~a~g~~------~~lVVDiG~g~T~v~pv~--~G~~-~~~~~~~~~~GG~~lt~~l~~~ 196 (394)
T 1k8k_B 126 VMFETYQFSGVYVAIQAVLTLYAQGLL------TGVVVDSGDGVTHICPVY--EGFS-LPHLTRRLDIAGRDITRYLIKL 196 (394)
T ss_dssp ----------------------------------CCEEEECSSCEEEECEE--TTEE-CSTTCEEESCCHHHHHHHHHHH
T ss_pred HhhhccCCCeEEEEhhHHHHHHhCCCc------eEEEEEcCCCceEeeeeE--CCEE-cccceEEeeccHHHHHHHHHHH
Confidence 5 4778999999999999999998753 459999999999998663 3332 1111234689999999999999
Q ss_pred HHHH-Hhhcc-CCHHHHHHHHHHHHHHHHHhcCCc--------------ceEEEEEecCCceeEEEEeHHHHH---HHHH
Q psy8852 362 IVKN-AFLKK-LSYKDVNILMIKSREIKELLSYQS--------------SVKLNVKLSDKKIVNITIDMKQFF---TITQ 422 (634)
Q Consensus 362 l~~~-~~~~~-~~~~~~~~L~~~~e~~K~~Ls~~~--------------~~~i~i~~~~g~~~~~~itr~~~e---~~~~ 422 (634)
+..+ +.... .+ ...+|++|+.++... .....+++.+|.. ++|+++.|. .+++
T Consensus 197 l~~~~~~~~~~~~-------~~~ae~iK~~~~~v~~d~~~~~~~~~~~~~~~~~~~lpdg~~--i~i~~erf~~~E~Lf~ 267 (394)
T 1k8k_B 197 LLLRGYAFNHSAD-------FETVRMIKEKLCYVGYNIEQEQKLALETTVLVESYTLPDGRI--IKVGGERFEAPEALFQ 267 (394)
T ss_dssp HHHTTCCCCTTTT-------HHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEECTTSCE--EEECTHHHHTGGGGTC
T ss_pred HHhcCCCCCcHHH-------HHHHHHHHHhheeEecCHHHHHHhhccCCcCceEEECCCCCE--EEECchhhcChHhhCC
Confidence 9875 21110 11 234566666654321 1123345556554 556777663 2333
Q ss_pred HH-----HHHHHHHHHHHHHHcCCC--cCCCCeEEEEcCCcCcHHHHHHHHhhccC-----------------C--cCCC
Q psy8852 423 HL-----VNRTILLSSKALMDANLT--IKDINNVILVGGSTRMKHIHEGVSNFFKT-----------------T--LLTS 476 (634)
Q Consensus 423 ~~-----~~~~~~~i~~~l~~~~~~--~~~i~~ViLvGG~s~~p~v~~~l~~~f~~-----------------~--~~~~ 476 (634)
|. ...+.++|.+.|.++..+ ..-.+.|+|+||+|.+|.+.++|++.++. + +..+
T Consensus 268 p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvLtGG~s~~~G~~~rl~~el~~~~~~~~~~~~~~~p~~~~v~v~~~ 347 (394)
T 1k8k_B 268 PHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLERELKQLYLERVLKGDVEKLSKFKIRIEDP 347 (394)
T ss_dssp GGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCSTTHHHHHHHHHHHHHHHHTCSSCCCTTCCCCC-----
T ss_pred chhccCCCCCHHHHHHHHHHhCCHHHHHHHHhCEEEeCcccccccHHHHHHHHHHHHHhhhhcccccCCCCceEEEEecC
Confidence 32 235778888888877543 22347899999999999999999887742 1 2235
Q ss_pred CChhhHHHHHHHHHHh
Q psy8852 477 IDPDKAVVFGAAIQAN 492 (634)
Q Consensus 477 ~~p~~ava~GAa~~a~ 492 (634)
.+|..++.+|++++|.
T Consensus 348 ~~~~~~~w~Ggsilas 363 (394)
T 1k8k_B 348 PRRKHMVFLGGAVLAD 363 (394)
T ss_dssp ----------------
T ss_pred CCcceeEEhhhHHhhC
Confidence 6788999999999886
No 31
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.79 E-value=2.7e-21 Score=175.81 Aligned_cols=98 Identities=17% Similarity=0.225 Sum_probs=84.4
Q ss_pred CCCCccccCCCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCC-hhhHHHHHHHHHHHHHHHHHcCChhhhHHHHHHhcCCC
Q psy8852 1 MKNYFDFFNLPKCFNIDMDLLDKIYYNFQKKIHPDNFIQKS-KIDQDASVKLSTYLNKAYSILKDPFLRSIYLCKLNGID 79 (634)
Q Consensus 1 ~~~~~~~l~~~~~~~~~~~~i~~~y~~~~~~~HPD~~~~~~-~~~~~~~~~~~~~i~~Ay~~L~d~~~r~~y~~~l~~~~ 79 (634)
++|||++|||+++++ .++||+|||+|++++||||++..+ +.+++.+.++|++||+||++|+||.+|+.|++.+.+..
T Consensus 9 ~~~~y~iLgv~~~a~--~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~~~~ 86 (155)
T 2l6l_A 9 KKDWYSILGADPSAN--ISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRCEDD 86 (155)
T ss_dssp CSHHHHHHTCCTTCC--HHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHHHHH
T ss_pred CCChhHhcCCCCCCC--HHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcchhh
Confidence 368999999999765 789999999999999999998765 46777888999999999999999999999999887665
Q ss_pred CccccccCCCHHHHHHHHHHHHH
Q psy8852 80 LNTKLNLNFSHDFLEQQMKWRET 102 (634)
Q Consensus 80 ~~~~~~~~~~~~~l~~~~e~~e~ 102 (634)
+.. ....+++|+|++|+|+|.
T Consensus 87 ~~~--~~~~~~~~~~~~m~~~e~ 107 (155)
T 2l6l_A 87 LRN--VGPVDAQVYLEEMSWNEG 107 (155)
T ss_dssp HHT--TCSSSEEEETTTSEEETT
T ss_pred ccc--cccccceeeHHHhccccC
Confidence 443 456688899999998753
No 32
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=99.75 E-value=4.3e-17 Score=168.93 Aligned_cols=203 Identities=17% Similarity=0.178 Sum_probs=140.7
Q ss_pred CcEEEEeCCCCCHHHH-HHHHHHHHHcCC------------ceeeeecchhHHHHHhhhccCc-----cceEEEEEEeCC
Q psy8852 262 FGAVITVPAYFNDIQR-QFTKNAAKLAGL------------NVLRLLNEPTSAAIAYKLDKNI-----FEGIFAVYDLGG 323 (634)
Q Consensus 262 ~~~viTVPa~~~~~qr-~~l~~aa~~aGl------------~~~~li~Ep~AAa~~y~~~~~~-----~~~~vlV~D~Gg 323 (634)
..+++++|..+...+| +++++++...+- ..+.+++||.||++++...... .+..++|+|+||
T Consensus 114 ~~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V~v~pE~~~a~~~~~~~~~~~~~~~~~~~~~vvDiGg 193 (355)
T 3js6_A 114 VVIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGVKIVAQPMGTLLDLNMENGKVFKAFTEGKYSVLDFGS 193 (355)
T ss_dssp EEEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEEEEEEHHHHHHHHTTEETTEECHHHHTCEEEEEEECS
T ss_pred EEEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEEEEEEEEeCcHHHHHHHHHccCccccccccCcEEEEEeCC
Confidence 3799999999888887 589998886543 5788999999999998765421 477899999999
Q ss_pred CeEEEEEEEEeCCeEEEEEEcCCCCccchhHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHhcCCcceEEEEEec
Q psy8852 324 GTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWIVKNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLS 403 (634)
Q Consensus 324 gT~dvsv~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~ 403 (634)
||||++++ .++.+ +...++...+||..+++.+.+++.+++.....+. ...++.+ . +..
T Consensus 194 gTtd~~v~--~~~~~-~~~~s~s~~~G~~~~~~~i~~~l~~~~~g~~l~~-------~~i~~g~-------~--~~~--- 251 (355)
T 3js6_A 194 GTTIIDTY--QNMKR-VEEESFVINKGTIDFYKRIASHVSKKSEGASITP-------RMIEKGL-------E--YKQ--- 251 (355)
T ss_dssp SCEEEEEE--ETTEE-CGGGCEEESCCHHHHHHHHHHHTC--------CH-------HHHHSCC-------C--------
T ss_pred CcEEEEEE--cCCEE-ccccccCcchHHHHHHHHHHHHHHHhcCCCcCCH-------HHHhcCC-------c--ccc---
Confidence 99999988 34432 1112334689999999999999988753211221 1111111 0 000
Q ss_pred CCce--eEEEEeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHH--HHHHHHhhccCCcCCCCCh
Q psy8852 404 DKKI--VNITIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKH--IHEGVSNFFKTTLLTSIDP 479 (634)
Q Consensus 404 ~g~~--~~~~itr~~~e~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~--v~~~l~~~f~~~~~~~~~p 479 (634)
.+.+ -.+.+ .+.+++.++++++++.+.+++.+.+ ...++.|+|+||++.++. +.+.+++.|+.. .||
T Consensus 252 ~~~~~~k~~di-~~~i~~a~~~~~~~I~~~i~~~l~~----~~~~~~Ivl~GGGa~l~~~~l~~~i~~~~~~~----~~p 322 (355)
T 3js6_A 252 CKLNQKTVIDF-KDEFYKEQDSLIEEVMSNFEITVGN----INSIDRIIVTGGGANIHFDSLSHYYSDVFEKA----DDS 322 (355)
T ss_dssp ----------C-HHHHHHHHHHHHHHHHHHHHHHTCC----TTSCSEEEEESTTHHHHHHHHHHHSSSCEECC----SSG
T ss_pred ccccccccccH-HHHHHHHHHHHHHHHHHHHHHHhhc----hhhccEEEEECcchhcchhhHHHHHHHHCCCC----CCc
Confidence 0000 11122 2456777888888888888887764 346799999999999998 889999998553 899
Q ss_pred hhHHHHHHHHHHhHhc
Q psy8852 480 DKAVVFGAAIQANFLS 495 (634)
Q Consensus 480 ~~ava~GAa~~a~~~~ 495 (634)
.+|+|.|+..++..+.
T Consensus 323 ~~anA~G~~~~~~~~~ 338 (355)
T 3js6_A 323 QFSNVRGYEKLGELLK 338 (355)
T ss_dssp GGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999987764
No 33
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=99.74 E-value=8.7e-17 Score=161.76 Aligned_cols=177 Identities=16% Similarity=0.114 Sum_probs=121.5
Q ss_pred cCCceeeeecchhHHHHHhhhccCccceEEEEEEeCCCeEEEEEEEEeCCeEEEEEEcCCCCccchhHHHHHHHHHHHHH
Q psy8852 287 AGLNVLRLLNEPTSAAIAYKLDKNIFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWIVKNA 366 (634)
Q Consensus 287 aGl~~~~li~Ep~AAa~~y~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~ 366 (634)
++......|+||+|+++++....+ ....|+|+|||+++++++. .++.++.....++...|+.+|++.+++++.-.+
T Consensus 69 a~~~~~~~Vne~~aha~a~~~~~~---~~~~vl~lgG~~~~~~~~~-~~g~~~~~~~~~~~~~g~G~f~d~~a~~l~~~~ 144 (276)
T 4ehu_A 69 NYSDADKQISELSCHARGVNFIIP---ETRTIIDIGGQDAKVLKLD-NNGRLLNFLMNDKCAAGTGRFLDVMAKIIEVDV 144 (276)
T ss_dssp GCCSCSEECCHHHHHHHHHHHHST---TCCEEEEECSSCEEEEEEC-TTSCEEEEEEECSCSTTSHHHHHHHHHHHTCCG
T ss_pred HhhCCCcccchHHHHHHHHHHhCC---CCCeEEEEcCCCceEEEEE-ecCceEEEEeCCCcCcchhhHHHHHHHHhccCh
Confidence 566778899999999998766554 2346899999999999884 567788888888889999999999888775444
Q ss_pred hhccCCHHHHHHHHHHHHHHHHHhcCCcceEEEEEecCCceeEEEEeH----------HHHHHHHHHHHHHHHHHHHHHH
Q psy8852 367 FLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNITIDM----------KQFFTITQHLVNRTILLSSKAL 436 (634)
Q Consensus 367 ~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~g~~~~~~itr----------~~~e~~~~~~~~~~~~~i~~~l 436 (634)
.... . ..+......+ + .+.. ..+.. ...++++..+...+.+.+....
T Consensus 145 ~~~~-------~---------~~~~a~~~~~--i---~~~~--~~f~~s~~~~~~~~~~~~~di~a~~~~~v~~~l~~~~ 201 (276)
T 4ehu_A 145 SELG-------S---------ISMNSQNEVS--I---SSTC--TVFAESEVISHLSENAKIEDIVAGIHTSVAKRVSSLV 201 (276)
T ss_dssp GGHH-------H---------HHTTCSSCCC--C---CCCS--HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhH-------H---------HHhcCCCCCC--c---CCcc--chhhhhHHHHhhhccccHHHHHHHHHHHHHHHHHHHH
Confidence 3211 0 0000000000 0 0000 00000 1124455555555555554444
Q ss_pred HHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhhccCCcCCCCChhhHHHHHHHHHHhHh
Q psy8852 437 MDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLLTSIDPDKAVVFGAAIQANFL 494 (634)
Q Consensus 437 ~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~~ 494 (634)
.+. ..++.|+|+||.+++|.|++.+++.||.+++.+.||++++|+|||++|...
T Consensus 202 ~~~----~~~~~vvl~GGva~n~~lr~~l~~~~g~~~~~p~~p~~~~A~GAAl~A~~~ 255 (276)
T 4ehu_A 202 KRI----GVQRNVVMVGGVARNSGIVRAMAREINTEIIVPDIPQLTGALGAALYAFDE 255 (276)
T ss_dssp HHH----CCCSSEEEESGGGGCHHHHHHHHHHHTSCEECCSSGGGHHHHHHHHHHHHH
T ss_pred Hhc----ccCCeEEEecCccchHHHHHHHHHHHCCCeeeCCCcchHHHHHHHHHHHHH
Confidence 433 357889999999999999999999999999999999999999999998754
No 34
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.72 E-value=5e-18 Score=140.55 Aligned_cols=76 Identities=16% Similarity=0.236 Sum_probs=67.6
Q ss_pred CCCccccCCCCCCCCCHHHHHHHHHHHHHhcCCCCCCC-CChhhHHHHHHHHHHHHHHHHHcCChhhhHHHHHHhcCCC
Q psy8852 2 KNYFDFFNLPKCFNIDMDLLDKIYYNFQKKIHPDNFIQ-KSKIDQDASVKLSTYLNKAYSILKDPFLRSIYLCKLNGID 79 (634)
Q Consensus 2 ~~~~~~l~~~~~~~~~~~~i~~~y~~~~~~~HPD~~~~-~~~~~~~~~~~~~~~i~~Ay~~L~d~~~r~~y~~~l~~~~ 79 (634)
.|||++|||+++ ++.++||++||+|+++||||+++. .++.++..+.+.|++|++||++|+||.+|+.|+..|.|..
T Consensus 16 ~~~y~iLgv~~~--as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~~~~ 92 (94)
T 1wjz_A 16 KDWYSILGADPS--ANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRSGPS 92 (94)
T ss_dssp SCHHHHTTCCTT--CCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSCCSC
T ss_pred CChHHHcCCCCC--CCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHccCCC
Confidence 599999999996 557899999999999999999874 3455667788999999999999999999999999998764
No 35
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.68 E-value=3.7e-17 Score=135.58 Aligned_cols=69 Identities=25% Similarity=0.389 Sum_probs=61.5
Q ss_pred CCCCccccCCCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCChhhHHHHHHHHHHHHHHHHHcCChhhhHHHHHHh
Q psy8852 1 MKNYFDFFNLPKCFNIDMDLLDKIYYNFQKKIHPDNFIQKSKIDQDASVKLSTYLNKAYSILKDPFLRSIYLCKL 75 (634)
Q Consensus 1 ~~~~~~~l~~~~~~~~~~~~i~~~y~~~~~~~HPD~~~~~~~~~~~~~~~~~~~i~~Ay~~L~d~~~r~~y~~~l 75 (634)
|+|||++|||++++ +.++||++||+|++++|||++... ++.+.+.|++||+||++|+||.+|+.|+...
T Consensus 1 M~d~Y~iLgv~~~a--s~~eIk~aYr~la~~~HPDk~~~~----~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g 69 (99)
T 2lgw_A 1 MASYYEILDVPRSA--SADDIKKAYRRKALQWHPDKNPDN----KEFAEKKFKEVAEAYEVLSDKHKREIYDRYG 69 (99)
T ss_dssp CCCHHHHSSSCTTS--CHHHHHHHHHHHHHHTSTTTCCSC----CHHHHHHHHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred CCCHHHHcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCcc----HHHHHHHHHHHHHHHHHHCCHHHHHHHHHhC
Confidence 89999999999965 477999999999999999997643 3457789999999999999999999999865
No 36
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.67 E-value=6.2e-17 Score=130.17 Aligned_cols=69 Identities=23% Similarity=0.423 Sum_probs=60.4
Q ss_pred CCCCccccCCCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCChhhHHHHHHHHHHHHHHHHHcCChhhhHHHHHHh
Q psy8852 1 MKNYFDFFNLPKCFNIDMDLLDKIYYNFQKKIHPDNFIQKSKIDQDASVKLSTYLNKAYSILKDPFLRSIYLCKL 75 (634)
Q Consensus 1 ~~~~~~~l~~~~~~~~~~~~i~~~y~~~~~~~HPD~~~~~~~~~~~~~~~~~~~i~~Ay~~L~d~~~r~~y~~~l 75 (634)
|.|||++|||+++ ++.++||++||+|++++|||++... ++.+.+.|++|++||++|+||.+|+.|+...
T Consensus 8 ~~~~y~iLgv~~~--as~~eIk~ayr~l~~~~HPDk~~~~----~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g 76 (82)
T 2ej7_A 8 MVDYYEVLDVPRQ--ASSEAIKKAYRKLALKWHPDKNPEN----KEEAERRFKQVAEAYEVLSDAKKRDIYDRYG 76 (82)
T ss_dssp SCCHHHHTTCCTT--CCHHHHHHHHHHHHTTSCTTTCSTT----HHHHHHHHHHHHHHHHHHSSTTHHHHHHHTC
T ss_pred CcCHHHHcCCCCC--CCHHHHHHHHHHHHHHHCcCCCCCc----HHHHHHHHHHHHHHHHHHCCHHHHHHHHHcC
Confidence 5799999999996 4578999999999999999997543 3457789999999999999999999999744
No 37
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.66 E-value=7.6e-17 Score=132.61 Aligned_cols=69 Identities=23% Similarity=0.379 Sum_probs=60.6
Q ss_pred CCCCccccCCCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCChhhHHHHHHHHHHHHHHHHHcCChhhhHHHHHHh
Q psy8852 1 MKNYFDFFNLPKCFNIDMDLLDKIYYNFQKKIHPDNFIQKSKIDQDASVKLSTYLNKAYSILKDPFLRSIYLCKL 75 (634)
Q Consensus 1 ~~~~~~~l~~~~~~~~~~~~i~~~y~~~~~~~HPD~~~~~~~~~~~~~~~~~~~i~~Ay~~L~d~~~r~~y~~~l 75 (634)
|.|||++|||+++++ .++||++||+|+++||||++.... +.+.+.|++|++||++|+||.+|+.|+...
T Consensus 8 ~~~~y~iLgv~~~as--~~eIk~ayr~l~~~~HPDk~~~~~----~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~ 76 (92)
T 2dmx_A 8 MANYYEVLGVQASAS--PEDIKKAYRKLALRWHPDKNPDNK----EEAEKKFKLVSEAYEVLSDSKKRSLYDRAG 76 (92)
T ss_dssp CCCHHHHHTCCTTCC--TTHHHHHHHHHHHHTCTTTCSSCS----HHHHHHHHHHHHHHHHHHSHHHHHHHHHHC
T ss_pred CcCHHHHcCCCCCCC--HHHHHHHHHHHHHHHCCCCCCccH----HHHHHHHHHHHHHHHHHCCHHHHHHHHHhC
Confidence 579999999999765 559999999999999999976542 357789999999999999999999999865
No 38
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.66 E-value=1.7e-16 Score=125.87 Aligned_cols=65 Identities=22% Similarity=0.372 Sum_probs=57.8
Q ss_pred CCCccccCCCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCChhhHHHHHHHHHHHHHHHHHcCChhhhHHHHHH
Q psy8852 2 KNYFDFFNLPKCFNIDMDLLDKIYYNFQKKIHPDNFIQKSKIDQDASVKLSTYLNKAYSILKDPFLRSIYLCK 74 (634)
Q Consensus 2 ~~~~~~l~~~~~~~~~~~~i~~~y~~~~~~~HPD~~~~~~~~~~~~~~~~~~~i~~Ay~~L~d~~~r~~y~~~ 74 (634)
.|||++|||+++ ++.++|+++||+|++++|||++.... +.+.|+.|++||++|+||.+|+.|+..
T Consensus 3 ~~~y~iLgv~~~--as~~~Ik~ayr~l~~~~HPD~~~~~~------~~~~f~~i~~Ay~~L~d~~~R~~Yd~~ 67 (77)
T 1hdj_A 3 KDYYQTLGLARG--ASDEEIKRAYRRQALRYHPDKNKEPG------AEEKFKEIAEAYDVLSDPRKREIFDRY 67 (77)
T ss_dssp CCSHHHHTCCTT--CCHHHHHHHHHHHHHTTCTTTCCCTT------HHHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred CCHHHHcCCCCC--CCHHHHHHHHHHHHHHHCcCCCCCcc------HHHHHHHHHHHHHHHCCHHHHHHHHHH
Confidence 699999999996 55789999999999999999976432 567899999999999999999999874
No 39
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.65 E-value=1.6e-16 Score=126.77 Aligned_cols=67 Identities=27% Similarity=0.469 Sum_probs=58.9
Q ss_pred CCCccccCCCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCChhhHHHHHHHHHHHHHHHHHcCChhhhHHHHHHh
Q psy8852 2 KNYFDFFNLPKCFNIDMDLLDKIYYNFQKKIHPDNFIQKSKIDQDASVKLSTYLNKAYSILKDPFLRSIYLCKL 75 (634)
Q Consensus 2 ~~~~~~l~~~~~~~~~~~~i~~~y~~~~~~~HPD~~~~~~~~~~~~~~~~~~~i~~Ay~~L~d~~~r~~y~~~l 75 (634)
.|||++|||+++ ++.++||++||+|++++|||++...+. +.+.|++|++||++|+||.+|+.|+...
T Consensus 7 ~~~y~iLgv~~~--a~~~~Ik~ayr~l~~~~HPD~~~~~~~-----a~~~f~~i~~Ay~~L~d~~~R~~YD~~g 73 (79)
T 2dn9_A 7 GDYYQILGVPRN--ASQKEIKKAYYQLAKKYHPDTNKDDPK-----AKEKFSQLAEAYEVLSDEVKRKQYDAYG 73 (79)
T ss_dssp SCHHHHHTCCTT--CCHHHHHHHHHHHHHHTCTTTCSSCTT-----HHHHHHHHHHHHHHHHSHHHHHHHHHSC
T ss_pred CCHHHHcCCCCC--CCHHHHHHHHHHHHHHHCcCCCCCCHH-----HHHHHHHHHHHHHHHCCHHHHHHHHhcc
Confidence 589999999995 557899999999999999999875432 5678999999999999999999998744
No 40
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.65 E-value=1.3e-16 Score=132.78 Aligned_cols=69 Identities=22% Similarity=0.318 Sum_probs=60.6
Q ss_pred CCCccccCCCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCChhhHHHHHHHHHHHHHHHHHcCChhhhHHHHHHhcC
Q psy8852 2 KNYFDFFNLPKCFNIDMDLLDKIYYNFQKKIHPDNFIQKSKIDQDASVKLSTYLNKAYSILKDPFLRSIYLCKLNG 77 (634)
Q Consensus 2 ~~~~~~l~~~~~~~~~~~~i~~~y~~~~~~~HPD~~~~~~~~~~~~~~~~~~~i~~Ay~~L~d~~~r~~y~~~l~~ 77 (634)
+|||++|||+++ ++.++||++||+|+++||||++...+ .+.++|++|++||++|+||.+|+.|+..|.+
T Consensus 17 ~~~Y~vLgv~~~--as~~eIk~ayr~l~~~~HPDk~~~~~-----~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l~~ 85 (99)
T 2yua_A 17 TALYDLLGVPST--ATQAQIKAAYYRQCFLYHPDRNSGSA-----EAAERFTRISQAYVVLGSATLRRKYDRGLLS 85 (99)
T ss_dssp SHHHHHHTCCTT--CCHHHHHHHHHHHHHHSCTTTCSSCS-----HHHHHHHHHHHHHHHTTSHHHHHHHHHTCCC
T ss_pred cCHHHHcCCCCC--CCHHHHHHHHHHHHHHHCcCCCCCCH-----HHHHHHHHHHHHHHHHCCHHHHHHHHHhccc
Confidence 589999999996 55789999999999999999986543 2567899999999999999999999987754
No 41
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.64 E-value=2.3e-16 Score=125.48 Aligned_cols=67 Identities=21% Similarity=0.341 Sum_probs=58.7
Q ss_pred CCCccccCCCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCChhhHHHHHHHHHHHHHHHHHcCChhhhHHHHHHhc
Q psy8852 2 KNYFDFFNLPKCFNIDMDLLDKIYYNFQKKIHPDNFIQKSKIDQDASVKLSTYLNKAYSILKDPFLRSIYLCKLN 76 (634)
Q Consensus 2 ~~~~~~l~~~~~~~~~~~~i~~~y~~~~~~~HPD~~~~~~~~~~~~~~~~~~~i~~Ay~~L~d~~~r~~y~~~l~ 76 (634)
.|||++|||+++ ++.++||++||+|++++|||++.. ..+.+.|+.|++||++|+||.+|+.|+..+.
T Consensus 7 ~~~y~iLgv~~~--as~~eIk~ayr~l~~~~HPDk~~~------~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~ 73 (78)
T 2ctp_A 7 GDYYEILGVSRG--ASDEDLKKAYRRLALKFHPDKNHA------PGATEAFKAIGTAYAVLSNPEKRKQYDQFGS 73 (78)
T ss_dssp CCHHHHHTCCTT--CCHHHHHHHHHHHHTTSCTTTCSS------HHHHHHHHHHHHHHHHHTSHHHHHHHHHTCS
T ss_pred CCHHHHcCCCCC--CCHHHHHHHHHHHHHHHCcCCCCC------ccHHHHHHHHHHHHHHHCCHHHHHHHHHcCc
Confidence 589999999996 457899999999999999999753 2366889999999999999999999997543
No 42
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.63 E-value=2.5e-16 Score=133.84 Aligned_cols=72 Identities=25% Similarity=0.337 Sum_probs=64.0
Q ss_pred CCCccccCCCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCChhhHHHHHHHHHHHHHHHHHcCChhhhHHHHHHhc
Q psy8852 2 KNYFDFFNLPKCFNIDMDLLDKIYYNFQKKIHPDNFIQKSKIDQDASVKLSTYLNKAYSILKDPFLRSIYLCKLN 76 (634)
Q Consensus 2 ~~~~~~l~~~~~~~~~~~~i~~~y~~~~~~~HPD~~~~~~~~~~~~~~~~~~~i~~Ay~~L~d~~~r~~y~~~l~ 76 (634)
.|||++|||++++ ++.++||+|||+|++++|||++++ ..+++.+.+.|++|++||++|+||.+|+.|+..+.
T Consensus 15 ~~~y~iLgv~~~a-~s~~eIk~aYr~l~~~~HPDk~~~--~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~ 86 (109)
T 2qsa_A 15 ENCYDVLEVNREE-FDKQKLAKAYRALARKHHPDRVKN--KEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLD 86 (109)
T ss_dssp SCHHHHTTCCGGG-CCHHHHHHHHHHHHHHTCGGGCCS--HHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred CCHHHHcCCCCCC-CCHHHHHHHHHHHHHHHCcCCCCC--ccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence 5999999999974 268899999999999999999875 45567788999999999999999999999998764
No 43
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.63 E-value=8.3e-17 Score=170.57 Aligned_cols=304 Identities=17% Similarity=0.155 Sum_probs=190.6
Q ss_pred EEEEEeCCceEEEEEEECCeeEEEecCCCCccccEEEEEecC-------------------------------CcEEecH
Q psy8852 135 SIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPD-------------------------------GKIYVGK 183 (634)
Q Consensus 135 vvGID~GTt~s~va~~~~g~~~vi~~~~g~~~~Ps~v~~~~~-------------------------------~~~~~G~ 183 (634)
.|-||.||.++++++..+..|..+ +||+|+.... ...++|+
T Consensus 7 ~iViDnGs~~~KaG~ag~~~P~~v--------~Ps~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~ 78 (427)
T 3dwl_A 7 PIIMDNGTGYSKLGYAGNDAPSYV--------FPTVIATRSAGASSGPAVSSKPSYMASKGSGHLSSKRATEDLDFFIGN 78 (427)
T ss_dssp CEEECCCSSBC-CEETTSSSCSCC--------CBCCEECC------------------------------CCSSCCEETH
T ss_pred eEEEECCCCeEEEEECCCCCCCCc--------CCceEEeecccccccccccccccccccccccccccccCcccCCeEEch
Confidence 478999999999999876665433 5666654321 1357777
Q ss_pred hHHhhhccCCCchhhhhhhhcCCCCCCcccCCCCeEEecCCCceEEEecCcccCHHhHHHHHHHHHHHHHHHHhCCC--c
Q psy8852 184 KAKITQNIDPKNTISSIKRFIARDLKNINTNSFPYDFQNKFGMLHIKTISGIKSPIEISAQIFITLKKIAENAVNNR--I 261 (634)
Q Consensus 184 ~A~~~~~~~~~~~i~~~k~~lg~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~~--~ 261 (634)
+|...... .+-. ..|+ .++.+.-.+.+..+++|+... .++.. -
T Consensus 79 ea~~~~~~-----------~l~~--------~~Pi-------------~~GvI~dwd~~e~iw~~~~~~---~L~v~~~~ 123 (427)
T 3dwl_A 79 DALKKASA-----------GYSL--------DYPI-------------RHGQIENWDHMERFWQQSLFK---YLRCEPED 123 (427)
T ss_dssp HHHHTHHH-----------HCCC--------CCSE-------------ETTEECCHHHHHHHHHHHHHT---TSCCCGGG
T ss_pred HHhhCccc-----------CcEE--------ecCc-------------ccCeeccHHHHHHHHHHHHhH---hhCCCCcC
Confidence 77543210 0000 1232 235666778888888877642 23332 2
Q ss_pred CcEEEEeCCCCCHHHHHHHHHHH-HHcCCceeeeecchhHHHHHhhhccCc--cceEEEEEEeCCCeEEEEEEEEeCCeE
Q psy8852 262 FGAVITVPAYFNDIQRQFTKNAA-KLAGLNVLRLLNEPTSAAIAYKLDKNI--FEGIFAVYDLGGGTFDISILKFKNGVF 338 (634)
Q Consensus 262 ~~~viTVPa~~~~~qr~~l~~aa-~~aGl~~~~li~Ep~AAa~~y~~~~~~--~~~~vlV~D~GggT~dvsv~~~~~~~~ 338 (634)
..+++|.|.......|+.+.+.+ +..|++.+.++.+|.+|+++.+..... ...+-+|+|+|+|+|+++.+. +|..
T Consensus 124 ~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~vla~~a~G~~~~~~~~~~tglVVDiG~g~T~v~PV~--~G~~ 201 (427)
T 3dwl_A 124 HYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDSGDGVTHIIPVA--EGYV 201 (427)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHHHHHHGGGGSTTTCSCCCCEEEEEESSSCEEEEEEE--TTEE
T ss_pred CcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHHHHHHhcCCcccccCCCceEEEEECCCCceEEEEEE--CCEE
Confidence 47999999999999999998877 789999999999999999988743210 124569999999999999872 2321
Q ss_pred EEEEEcCCCCccchhHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHhcCCcce-----------EEEE---Ee--
Q psy8852 339 KVLSVGGDSNLGGDDFDYCLFSWIVKNAFLKKLSYKDVNILMIKSREIKELLSYQSSV-----------KLNV---KL-- 402 (634)
Q Consensus 339 ~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~-----------~i~i---~~-- 402 (634)
+........+||+++|+.|.+++.++.... .=...++.+|+.++..... ...+ ++
T Consensus 202 -l~~~~~rl~~gG~~lt~~L~~lL~~~~~~~--------~~~~~~~~IKe~~cyv~~d~~~e~~~~~~~~~~~~~~~l~~ 272 (427)
T 3dwl_A 202 -IGSSIKTMPLAGRDVTYFVQSLLRDRNEPD--------SSLKTAERIKEECCYVCPDIVKEFSRFDREPDRYLKYASES 272 (427)
T ss_dssp -CGGGCEEESCCHHHHHHHHHHTTC----------------CHHHHHHHHHHCCCCSCHHHHHHHTTC-----CCBCC--
T ss_pred -ehhhheeccccHHHHHHHHHHHHHHcCCCc--------hhHHHHHHHHHhcCcccCCHHHHHHHhhcCccccceeEeeC
Confidence 111112258999999999998887654321 1124566677766543110 0001 12
Q ss_pred cCCceeEEEEeHHHHH---HHHHHH------HHHHHHHHHHHHHHcCCCc--CCCCeEEEEcCCcCcHHHHHHHHhhcc-
Q psy8852 403 SDKKIVNITIDMKQFF---TITQHL------VNRTILLSSKALMDANLTI--KDINNVILVGGSTRMKHIHEGVSNFFK- 470 (634)
Q Consensus 403 ~~g~~~~~~itr~~~e---~~~~~~------~~~~~~~i~~~l~~~~~~~--~~i~~ViLvGG~s~~p~v~~~l~~~f~- 470 (634)
.+|....+++..+.|. -+++|- ...+.+++.+.|.++..+. .-...|+|+||+|.+|.+.++|.+.+.
T Consensus 273 ~~g~~~~i~ig~erf~~pE~LF~P~~~g~~~~~gI~~~i~~sI~~c~~dlr~~L~~nIvLtGG~sl~~G~~~RL~~El~~ 352 (427)
T 3dwl_A 273 ITGHSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPELVDNVVQSSPIDVRKGLYKNIVLSGGSTLFKNFGNRLQRDLKR 352 (427)
T ss_dssp -------CBCCTHHHHSGGGGTCGGGTCSSCCSCHHHHHHHHHHTSCHHHHHHHHHCEEEESGGGCSTTTTHHHHHHHHH
T ss_pred CCCCeeEEEEChHhhhChhhccCchhcCCccCCCccHHHHHHHHhCCHHHHHHHhCCEEEEccCcCCCChHHHHHHHHHH
Confidence 3455556777777763 344441 2457788888888765321 112569999999999999999886541
Q ss_pred ---------------------CCcCCCCChhhHHHHHHHHHHh
Q psy8852 471 ---------------------TTLLTSIDPDKAVVFGAAIQAN 492 (634)
Q Consensus 471 ---------------------~~~~~~~~p~~ava~GAa~~a~ 492 (634)
.++..+.++..++=.|++++|.
T Consensus 353 l~~~~~~~~~~~~~~~p~~~~vkv~~~~~r~~s~WiGGSilas 395 (427)
T 3dwl_A 353 IVDERIHRSEMLSGAKSGGVDVNVISHKRQRNAVWFGGSLLAQ 395 (427)
T ss_dssp HHTTC-------------CCCCCEECCTTCTTHHHHHHHHHHH
T ss_pred hhhhhccccccccccCCCceeEEEecCCccccceecCceeecc
Confidence 1233456778899999999985
No 44
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.62 E-value=4e-16 Score=122.24 Aligned_cols=62 Identities=26% Similarity=0.387 Sum_probs=55.3
Q ss_pred CCCccccCCCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCChhhHHHHHHHHHHHHHHHHHcCChhhhHHHHH
Q psy8852 2 KNYFDFFNLPKCFNIDMDLLDKIYYNFQKKIHPDNFIQKSKIDQDASVKLSTYLNKAYSILKDPFLRSIYLC 73 (634)
Q Consensus 2 ~~~~~~l~~~~~~~~~~~~i~~~y~~~~~~~HPD~~~~~~~~~~~~~~~~~~~i~~Ay~~L~d~~~r~~y~~ 73 (634)
.|||++|||+++ ++..+|+++||+|++++|||+++.. .+.|++|++||++|+||.+|+.|+.
T Consensus 8 ~~~y~iLgl~~~--a~~~eIk~ayr~l~~~~HPD~~~~~--------~~~f~~i~~Ay~~L~d~~~R~~YD~ 69 (73)
T 2och_A 8 TGYYDVLGVKPD--ASDNELKKAYRKMALKFHPDKNPDG--------AEQFKQISQAYEVLSDEKKRQIYDQ 69 (73)
T ss_dssp CCHHHHHTCCTT--CCHHHHHHHHHHHHHHTCTTTCTTC--------HHHHHHHHHHHHHHTSHHHHHHHHH
T ss_pred CCHHHHcCCCCC--CCHHHHHHHHHHHHHHHCcCCCcCH--------HHHHHHHHHHHHHHCCHHHHHHHHh
Confidence 489999999995 5578999999999999999997542 3578999999999999999999986
No 45
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.62 E-value=4.9e-16 Score=126.45 Aligned_cols=67 Identities=18% Similarity=0.233 Sum_probs=58.8
Q ss_pred CCCccccCCCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCChhhHHHHHHHHHHHHHHHHHcCChhhhHHHHHHhc
Q psy8852 2 KNYFDFFNLPKCFNIDMDLLDKIYYNFQKKIHPDNFIQKSKIDQDASVKLSTYLNKAYSILKDPFLRSIYLCKLN 76 (634)
Q Consensus 2 ~~~~~~l~~~~~~~~~~~~i~~~y~~~~~~~HPD~~~~~~~~~~~~~~~~~~~i~~Ay~~L~d~~~r~~y~~~l~ 76 (634)
.|||++|||+++ ++.++||++||+|++++|||++... .+.+.|++|++||++|+||.+|+.|+....
T Consensus 17 ~d~y~iLgv~~~--as~~eIk~ayr~l~~~~HPDk~~~~------~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~ 83 (88)
T 2cug_A 17 FDPYRVLGVSRT--ASQADIKKAYKKLAREWHPDKNKDP------GAEDRFIQISKAYEILSNEEKRTNYDHYGS 83 (88)
T ss_dssp SCHHHHHTCCTT--CCHHHHHHHHHHHHHHSCTTTCCST------THHHHHHHHHHHHHHHHSHHHHHHHHHHTT
T ss_pred CCHHHHcCcCCC--CCHHHHHHHHHHHHHHHCcCCCCCh------hHHHHHHHHHHHHHHHCCHHHHHHHHHcCC
Confidence 489999999996 5578999999999999999998752 256789999999999999999999997543
No 46
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.62 E-value=4.6e-16 Score=126.61 Aligned_cols=66 Identities=23% Similarity=0.314 Sum_probs=58.5
Q ss_pred CCCccccCCCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCChhhHHHHHHHHHHHHHHHHHcCChhhhHHHHHHh
Q psy8852 2 KNYFDFFNLPKCFNIDMDLLDKIYYNFQKKIHPDNFIQKSKIDQDASVKLSTYLNKAYSILKDPFLRSIYLCKL 75 (634)
Q Consensus 2 ~~~~~~l~~~~~~~~~~~~i~~~y~~~~~~~HPD~~~~~~~~~~~~~~~~~~~i~~Ay~~L~d~~~r~~y~~~l 75 (634)
.|||++|||+++ ++.++||++||+|++++|||++.. ..+.+.|++|++||++|+||.+|+.|+..+
T Consensus 7 ~~~y~iLgv~~~--as~~eIk~ayr~l~~~~HPDk~~~------~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~ 72 (88)
T 2ctr_A 7 GSYYDILGVPKS--ASERQIKKAFHKLAMKYHPDKNKS------PDAEAKFREIAEAYETLSDANRRKEYDTLG 72 (88)
T ss_dssp CSHHHHHTCCTT--CCHHHHHHHHHHHHHHTCTTTCCS------HHHHHHHHHHHHHHHHHHSSHHHHHHHHTC
T ss_pred CCHHHHcCcCCC--CCHHHHHHHHHHHHHHHCcCCCCC------hHHHHHHHHHHHHHHHHCCHHHHHHHHHhC
Confidence 689999999996 557899999999999999999762 236789999999999999999999999754
No 47
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.61 E-value=6.2e-16 Score=131.82 Aligned_cols=67 Identities=18% Similarity=0.208 Sum_probs=59.7
Q ss_pred CCCccccCCCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCChhhHHHHHHHHHHHHHHHHHcCChhhhHHHHHHh
Q psy8852 2 KNYFDFFNLPKCFNIDMDLLDKIYYNFQKKIHPDNFIQKSKIDQDASVKLSTYLNKAYSILKDPFLRSIYLCKL 75 (634)
Q Consensus 2 ~~~~~~l~~~~~~~~~~~~i~~~y~~~~~~~HPD~~~~~~~~~~~~~~~~~~~i~~Ay~~L~d~~~r~~y~~~l 75 (634)
.|||++|||+++ ++.++||+|||+|++++||||+.+.+ .+.+.|++|++||++|+||.+|+.|+..+
T Consensus 20 ~d~Y~iLgv~~~--as~~eIk~ayr~l~~~~HPDk~~~~~-----~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~ 86 (112)
T 2ctq_A 20 EDYYTLLGCDEL--SSVEQILAEFKVRALECHPDKHPENP-----KAVETFQKLQKAKEILTNEESRARYDHWR 86 (112)
T ss_dssp CCHHHHTTCCTT--SCHHHHHHHHHHHHHTTCTTTCTTCS-----THHHHHHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred CCHHHHcCCCCC--CCHHHHHHHHHHHHHHHCcCCCCCcH-----HHHHHHHHHHHHHHHHCCHHHHHHHHHhh
Confidence 699999999996 55779999999999999999987543 26788999999999999999999999866
No 48
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=99.61 E-value=5.6e-15 Score=158.01 Aligned_cols=304 Identities=14% Similarity=0.146 Sum_probs=196.0
Q ss_pred EEEEEeCCceEEEEEEECCeeEEEecCCCCccccEEEEEecC---CcEEecHhHHhhhccCCCchhhhhhhhcCCCCCCc
Q psy8852 135 SIGIDFGTTNSLVAIVRNNIPEVLKDKYGYFLIPSIVRYLPD---GKIYVGKKAKITQNIDPKNTISSIKRFIARDLKNI 211 (634)
Q Consensus 135 vvGID~GTt~s~va~~~~g~~~vi~~~~g~~~~Ps~v~~~~~---~~~~~G~~A~~~~~~~~~~~i~~~k~~lg~~~~~~ 211 (634)
.|+||+||.++++++..++.|..+ +||+|+.... ...+||.++.... +. .
T Consensus 25 ~iVID~GS~~~kaG~ag~~~P~~v--------~PSvVg~~~~~~~~~~~vG~e~~~~~---r~---------------~- 77 (498)
T 3qb0_A 25 AVVIDPGSYTTNIGYSGSDFPQSI--------LPSVYGKYTADEGNKKIFSEQSIGIP---RK---------------D- 77 (498)
T ss_dssp CEEEECCSSEEEEEETTCSSCSEE--------EESEEEEESSCSSCCEECCTTGGGSC---CT---------------T-
T ss_pred eEEEECCCcEEEEEECCCCCeeee--------cCceeEEeccCCCccEEEecHHHhcC---cC---------------c-
Confidence 589999999999998766655444 7999998643 2477888642211 00 0
Q ss_pred ccCCCCeEEecCCCceEEEecCcccCHHhHHHHHHHHHHHHHHHHhCC--CcC-cEEEEeCCCCCHHHHHHHHHHH-HHc
Q psy8852 212 NTNSFPYDFQNKFGMLHIKTISGIKSPIEISAQIFITLKKIAENAVNN--RIF-GAVITVPAYFNDIQRQFTKNAA-KLA 287 (634)
Q Consensus 212 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~L~~l~~~a~~~~~~--~~~-~~viTVPa~~~~~qr~~l~~aa-~~a 287 (634)
+. +...+.++.+.-.+.+..+++|+... .++. .-. .+++|.|.......|+.|.+++ +..
T Consensus 78 ------l~-------l~~Pi~~GvI~dwd~~E~iw~~~f~~---~L~v~p~~~~pvlltep~~n~~~~Re~~~eilFE~f 141 (498)
T 3qb0_A 78 ------YE-------LKPIIENGLVIDWDTAQEQWQWALQN---ELYLNSNSGIPALLTEPVWNSTENRKKSLEVLLEGM 141 (498)
T ss_dssp ------EE-------EEESEETTEESCHHHHHHHHHHHHHH---TSCCSCCTTCCEEEEECTTCCHHHHHHHHHHHHTTS
T ss_pred ------eE-------EeccCcCCEEccHHHHHHHHHHHHHh---hhCCCcccCCceEEEeCCCCcHHHHHHHHHHHHhhc
Confidence 00 01112345677778888888887753 2332 223 6999999999999999998864 789
Q ss_pred CCceeeeecchhHHHHHhhhccCccceEEEEEEeCCCeEEEEEEEEeCCeEEEEEEcCCCCccchhHHHHHHHHHHHH--
Q psy8852 288 GLNVLRLLNEPTSAAIAYKLDKNIFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWIVKN-- 365 (634)
Q Consensus 288 Gl~~~~li~Ep~AAa~~y~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~-- 365 (634)
|++.+.++.+|.+|+++++... -||+|+|+|+|+++.+. +|.. +........+||+++|+.|.+++.+.
T Consensus 142 ~vpav~l~~~~vlalya~G~~t------glVVDiG~g~T~vvPI~--~G~~-l~~ai~rl~vgG~~lt~~L~~lL~~~~i 212 (498)
T 3qb0_A 142 QFEACYLAPTSTCVSFAAGRPN------CLVVDIGHDTCSVSPIV--DGMT-LSKSTRRNFIAGKFINHLIKKALEPKEI 212 (498)
T ss_dssp CCSEEEEEEHHHHHHHHHTCSS------EEEEEECSSCEEEEEEE--TTEE-CGGGCEEESCSHHHHHHHHHHHTTTSCC
T ss_pred CCCeEeecchHHHHHHHcCCCe------EEEEEcCCCcEEEEEEe--CCEE-ccccceeccccHHHHHHHHHHHHHhccc
Confidence 9999999999999999887532 39999999999999874 3321 11111225799999999999998753
Q ss_pred ---Hh----------hcc---CCH--HHHHHHHHHHHHHHHHhcCCc--------------ceEEEEEecCCceeEEEEe
Q psy8852 366 ---AF----------LKK---LSY--KDVNILMIKSREIKELLSYQS--------------SVKLNVKLSDKKIVNITID 413 (634)
Q Consensus 366 ---~~----------~~~---~~~--~~~~~L~~~~e~~K~~Ls~~~--------------~~~i~i~~~~g~~~~~~it 413 (634)
+. ... .+. .....-+.-++.+|+.++.-. ......++.+|..+ .+.
T Consensus 213 ~P~~~i~~k~~~~~~~~~~~~~~~s~~~~~~~~~iv~~iKE~~c~Va~~~~~~~~~~~~~~~~~~~yeLPDG~~i--~lg 290 (498)
T 3qb0_A 213 IPLFAIKQRKPEFIKKTFDYEVDKSLYDYANNRGFFQECKETLCHICPTKTLEETKTELSSTAKRSIESPWNEEI--VFD 290 (498)
T ss_dssp CCSTTEEECSSSCEECCCSSCCCHHHHHHHHHHTHHHHHHHHTCCCCSSCHHHHHHHHHHTCCCEEEECSSSCEE--EEC
T ss_pred cchhhhcccccccccccCCCccCccHHHHHHHHHHHHHHHHhhEEecCCccHhHHhhhccCcCceEEECCCCCEE--EEC
Confidence 00 000 111 111112235677788765321 12345566677644 445
Q ss_pred HH-HHH---HHHHHH-----------------------------------------------------------------
Q psy8852 414 MK-QFF---TITQHL----------------------------------------------------------------- 424 (634)
Q Consensus 414 r~-~~e---~~~~~~----------------------------------------------------------------- 424 (634)
.+ .|. .++.|-
T Consensus 291 ~E~Rf~~pE~LF~P~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (498)
T 3qb0_A 291 NETRYGFAEELFLPKEDDIPANWPRSNSGVVKTWRNDYVPLKRTKPSGVNKSDKKVTPTEEKEQEAVSKSTSPAANSADT 370 (498)
T ss_dssp HHHHHHHHHTTTSCCGGGSCTTSCCCSSSCCCCCSCCCCCCCBCC-----------------------------------
T ss_pred chHhhhCchhhCCHhHcCCccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 44 332 122221
Q ss_pred --------------------HHHHHHHHHHHHHHcCCCcC--CCCeEEEEcCCcCcHHHHHHHHhhc----c---CCcCC
Q psy8852 425 --------------------VNRTILLSSKALMDANLTIK--DINNVILVGGSTRMKHIHEGVSNFF----K---TTLLT 475 (634)
Q Consensus 425 --------------------~~~~~~~i~~~l~~~~~~~~--~i~~ViLvGG~s~~p~v~~~l~~~f----~---~~~~~ 475 (634)
...+-+++.+.+.++..+.. -...|+|+||+|.+|.+.++|.+.+ + .++..
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~Gi~e~i~~sI~~cd~d~r~~L~~nIvLsGGst~~pGf~~Rl~~El~~l~p~~~i~v~~ 450 (498)
T 3qb0_A 371 PNETGKRPLEEEKPPKENNELIGLADLVYSSIMSSDVDLRATLAHNVVLTGGTSSIPGLSDRLMTELNKILPSLKFRILT 450 (498)
T ss_dssp ------------------CCSCCHHHHHHHHHHTSCTTTHHHHHTTEEEESGGGGSTTHHHHHHHHHHHHSTTSCCCEEC
T ss_pred ccccccccccccccccccccCCCchHHHHHHHHhCCHHHHHHHhcCEEEeCCccCchhHHHHHHHHHHHhCCCCeeEEEc
Confidence 01245667777776654321 1278999999999999999998765 2 23333
Q ss_pred C---CChhhHHHHHHHHHHh
Q psy8852 476 S---IDPDKAVVFGAAIQAN 492 (634)
Q Consensus 476 ~---~~p~~ava~GAa~~a~ 492 (634)
+ .++..++=.|++++|.
T Consensus 451 ~~~~~er~~s~WiGgsilas 470 (498)
T 3qb0_A 451 TGHTIERQYQSWLGGSILTS 470 (498)
T ss_dssp CSCTGGGGSHHHHHHHHHHT
T ss_pred CCCCCccCccEEcccEEEec
Confidence 3 4567889999999885
No 49
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=99.61 E-value=3.2e-16 Score=161.08 Aligned_cols=203 Identities=14% Similarity=0.113 Sum_probs=142.6
Q ss_pred CcEEEEeCCCCCH--HHHHHHHHHHHHc--------C------CceeeeecchhHHHHHhhhccCccceEEEEEEeCCCe
Q psy8852 262 FGAVITVPAYFND--IQRQFTKNAAKLA--------G------LNVLRLLNEPTSAAIAYKLDKNIFEGIFAVYDLGGGT 325 (634)
Q Consensus 262 ~~~viTVPa~~~~--~qr~~l~~aa~~a--------G------l~~~~li~Ep~AAa~~y~~~~~~~~~~vlV~D~GggT 325 (634)
..+++++|..+.. .+|+.+++..+.- | +..+.+++||.+|.+.+. . ...+..++|+|+||||
T Consensus 106 v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v~v~pe~~ga~~~~~-~-~~~~~~v~vvDiGggT 183 (329)
T 4apw_A 106 VQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDITIKAEGSGVLFLEQ-E-NFKNKNVAVIDFGGLN 183 (329)
T ss_dssp EEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEEEEEEHHHHHHHHSC-C-CCTTCEEEEEEECSSC
T ss_pred EEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEEEEEeccHHHHhhcc-h-hhccCCEEEEEeCCCc
Confidence 4799999987664 3677787776631 2 235778899998887653 2 2267889999999999
Q ss_pred EEEEEEEEeCCeEEEEEEcCCCCccchhHHHHHHHHHHH-HHhhccCCHHHHHHHHHHHHHHHHHhcCCcceEEEEEecC
Q psy8852 326 FDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWIVK-NAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKLSD 404 (634)
Q Consensus 326 ~dvsv~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~-~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~ 404 (634)
||++++. ++.+ +...++...+||.++++.+.+++.+ +++... +. ..++++|+. . .. ..
T Consensus 184 td~~v~~--~g~~-~~~~~~~~~~G~~~~~~~i~~~l~~~~~g~~i-~~-------~~~e~i~~~-g---~~--~~---- 242 (329)
T 4apw_A 184 MGFSLYR--NCVV-NPSERFIEEHGVKDLIIRVGDALTDLNNGNLI-TN-------EQAESALNN-G---YM--KK---- 242 (329)
T ss_dssp EEEEEEE--TTEE-CGGGCEEESCCHHHHHHHHHTSSSSCSSCSCT-TS-------BTTTTCSSS-C---SS--CE----
T ss_pred EEEEEEE--CCEE-eeccccchhhHHHHHHHHHHHHHHhhccCCCC-CH-------HHHHHHHhc-C---Cc--cc----
Confidence 9999988 3433 2222345789999999999998887 665332 10 122223221 0 00 00
Q ss_pred CceeEEEEeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhhccCCcCCCCChhhHHH
Q psy8852 405 KKIVNITIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLLTSIDPDKAVV 484 (634)
Q Consensus 405 g~~~~~~itr~~~e~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~ava 484 (634)
|.+. ..+..+++++.++++++.+.+.+++. . .+.+.++.|+|+||++.+ +.+.+++.|+.++....||..|+|
T Consensus 243 g~~~-~~~~~~~i~~~~~e~~~~I~~~i~~~-~---~~~~~~~~IvltGGGA~l--~~~~l~~~~~~~v~v~~~P~~a~a 315 (329)
T 4apw_A 243 GGEI-DTESSTVIKKVKEKFLKDAIKLIEKR-G---FKLDQLDSLIFIGGTTQK--LKEQISKTYPNNSIITNNSQWTTC 315 (329)
T ss_dssp ECTT-CCSTTHHHHHHHHHHHHHHHHHHHHH-T---CCTTSCSEEEEESTTHHH--HHHHHHHHSTTCEECCSSGGGHHH
T ss_pred CCcc-hhHHHHHHHHHHHHHHHHHHHHHHHc-C---CCHHHccEEEEECChHHH--HHHHHHHHcCCCCEecCCChhhHH
Confidence 1111 13456788888888888888888776 3 344457999999999997 679999999977778899999999
Q ss_pred HHHHHHHhHh
Q psy8852 485 FGAAIQANFL 494 (634)
Q Consensus 485 ~GAa~~a~~~ 494 (634)
+|+..++...
T Consensus 316 ~G~~~~~~~k 325 (329)
T 4apw_A 316 EGLYKVAVAK 325 (329)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHhhh
Confidence 9999987654
No 50
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.58 E-value=1.8e-15 Score=128.09 Aligned_cols=65 Identities=26% Similarity=0.328 Sum_probs=58.0
Q ss_pred CCCccccCCCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCChhhHHHHHHHHHHHHHHHHHcCChhhhHHHHH
Q psy8852 2 KNYFDFFNLPKCFNIDMDLLDKIYYNFQKKIHPDNFIQKSKIDQDASVKLSTYLNKAYSILKDPFLRSIYLC 73 (634)
Q Consensus 2 ~~~~~~l~~~~~~~~~~~~i~~~y~~~~~~~HPD~~~~~~~~~~~~~~~~~~~i~~Ay~~L~d~~~r~~y~~ 73 (634)
.|||++|||+++ ++.++||++||+|++++|||++... ..+.+.|++|++||++|+||.+|+.|+.
T Consensus 17 ~~~Y~vLgv~~~--as~~eIk~aYr~la~~~HPDk~~~~-----~~a~~~f~~i~~Ay~vL~d~~~R~~YD~ 81 (109)
T 2ctw_A 17 ESLYHVLGLDKN--ATSDDIKKSYRKLALKYHPDKNPDN-----PEAADKFKEINNAHAILTDATKRNIYDK 81 (109)
T ss_dssp CCHHHHHTCCTT--CCHHHHHHHHHHHHHHSCTTTSTTC-----HHHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred CCHHHHcCcCCC--CCHHHHHHHHHHHHHHHCcCCCCCc-----HHHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence 589999999996 5588999999999999999998653 2367899999999999999999999986
No 51
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.58 E-value=1.3e-15 Score=125.05 Aligned_cols=64 Identities=25% Similarity=0.329 Sum_probs=56.4
Q ss_pred CCCccccCCCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCChhhHHHHHHHHHHHHHHHHHcCChhhhHHHHHHh
Q psy8852 2 KNYFDFFNLPKCFNIDMDLLDKIYYNFQKKIHPDNFIQKSKIDQDASVKLSTYLNKAYSILKDPFLRSIYLCKL 75 (634)
Q Consensus 2 ~~~~~~l~~~~~~~~~~~~i~~~y~~~~~~~HPD~~~~~~~~~~~~~~~~~~~i~~Ay~~L~d~~~r~~y~~~l 75 (634)
.|||++|||+++ ++.++||++||+|++++|||++... .+.|++|++||++|+||.+|+.|+...
T Consensus 8 ~~~y~iLgv~~~--as~~eIk~ayr~l~~~~HPDk~~~~--------~~~f~~i~~Ay~~L~d~~~R~~YD~~~ 71 (92)
T 2o37_A 8 TKLYDLLGVSPS--ANEQELKKGYRKAALKYHPDKPTGD--------TEKFKEISEAFEILNDPQKREIYDQYG 71 (92)
T ss_dssp CHHHHHHTCCTT--CCHHHHHHHHHHHHHHHCTTSTTCC--------HHHHHHHHHHHHHHTSHHHHHHHHHHC
T ss_pred CCHHHHcCCCCC--CCHHHHHHHHHHHHHHHCcCCCCCh--------HHHHHHHHHHHHHHCCHHHHHHHHHHC
Confidence 589999999996 5578999999999999999997543 247899999999999999999999754
No 52
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.57 E-value=9.8e-16 Score=128.66 Aligned_cols=67 Identities=21% Similarity=0.333 Sum_probs=58.9
Q ss_pred CCCccccCCCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCChhhHHHHHHHHHHHHHHHHHcCChhhhHHHHHHh
Q psy8852 2 KNYFDFFNLPKCFNIDMDLLDKIYYNFQKKIHPDNFIQKSKIDQDASVKLSTYLNKAYSILKDPFLRSIYLCKL 75 (634)
Q Consensus 2 ~~~~~~l~~~~~~~~~~~~i~~~y~~~~~~~HPD~~~~~~~~~~~~~~~~~~~i~~Ay~~L~d~~~r~~y~~~l 75 (634)
.|||++|||+++ ++.++||++||+|++++|||++...+. +.+.|++|++||++|+||.+|+.|+...
T Consensus 3 ~~~y~iLgv~~~--as~~eIk~ayr~l~~~~HPDk~~~~~~-----a~~~f~~i~~Ay~~L~d~~~R~~YD~~~ 69 (103)
T 1bq0_A 3 QDYYEILGVSKT--AEEREIRKAYKRLAMKYHPDRNQGDKE-----AEAKFKEIKEAYEVLTDSQKRAAYDQYG 69 (103)
T ss_dssp CCSTTTTSSCSS--CCHHHHHHHHHHHHTTTCTTTCTTTCT-----HHHHHHHHTTTTTSTTCSHHHHHTTTST
T ss_pred CCHHHHcCcCCC--CCHHHHHHHHHHHHHHHCcCCCCCcHH-----HHHHHHHHHHHHHHHCCHHHHHHHHHHh
Confidence 599999999996 557899999999999999999875432 5678999999999999999999998754
No 53
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.54 E-value=2.4e-15 Score=122.58 Aligned_cols=60 Identities=18% Similarity=0.259 Sum_probs=52.8
Q ss_pred CCCccccCCCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCChhhHHHHHHHHHHHHHHHHHcCChhhhH
Q psy8852 2 KNYFDFFNLPKCFNIDMDLLDKIYYNFQKKIHPDNFIQKSKIDQDASVKLSTYLNKAYSILKDPFLRS 69 (634)
Q Consensus 2 ~~~~~~l~~~~~~~~~~~~i~~~y~~~~~~~HPD~~~~~~~~~~~~~~~~~~~i~~Ay~~L~d~~~r~ 69 (634)
.|||++|||+++ ++.++||++||+|+++|||||+.... +.+.|++||+||++|+||.+|+
T Consensus 27 ~~~y~iLgv~~~--as~~eIk~aYr~la~~~HPDk~~~~~------~~~~f~~i~~Ay~~L~d~~~R~ 86 (90)
T 2ys8_A 27 KDSWDMLGVKPG--ASRDEVNKAYRKLAVLLHPDKCVAPG------SEDAFKAVVNARTALLKNIKSG 86 (90)
T ss_dssp SSHHHHHTCCTT--CCHHHHHHHHHHHHHHHCTTTCCCTT------HHHHHHHHHHHHHHHHHHHCCS
T ss_pred CCHHHHcCcCCC--CCHHHHHHHHHHHHHHHCcCCCCCcc------HHHHHHHHHHHHHHHCCccccc
Confidence 589999999995 55789999999999999999986532 4567999999999999999986
No 54
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.50 E-value=5.5e-15 Score=116.98 Aligned_cols=60 Identities=18% Similarity=0.251 Sum_probs=53.2
Q ss_pred CCccccCCCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCChhhHHHHHHHHHHHHHHHHHcCChhhhHHH
Q psy8852 3 NYFDFFNLPKCFNIDMDLLDKIYYNFQKKIHPDNFIQKSKIDQDASVKLSTYLNKAYSILKDPFLRSIY 71 (634)
Q Consensus 3 ~~~~~l~~~~~~~~~~~~i~~~y~~~~~~~HPD~~~~~~~~~~~~~~~~~~~i~~Ay~~L~d~~~r~~y 71 (634)
++|++|||++++.++..+||++||+|++++|||+... .++|++||+||++|+||.+|+.+
T Consensus 12 ~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~---------~~~f~~i~~AYe~L~~~~~r~~~ 71 (79)
T 1faf_A 12 RLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS---------HALMQELNSLWGTFKTEVYNLRM 71 (79)
T ss_dssp HHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC---------HHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC---------HHHHHHHHHHHHHHhhHHHHHHH
Confidence 6899999999855778999999999999999999532 36799999999999999999874
No 55
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.50 E-value=1.2e-15 Score=129.12 Aligned_cols=64 Identities=19% Similarity=0.176 Sum_probs=56.7
Q ss_pred CCCccccCCCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCChhhHHHHHHHHHHHHHHHHHcCChhhhHHHHHH
Q psy8852 2 KNYFDFFNLPKCFNIDMDLLDKIYYNFQKKIHPDNFIQKSKIDQDASVKLSTYLNKAYSILKDPFLRSIYLCK 74 (634)
Q Consensus 2 ~~~~~~l~~~~~~~~~~~~i~~~y~~~~~~~HPD~~~~~~~~~~~~~~~~~~~i~~Ay~~L~d~~~r~~y~~~ 74 (634)
.+||++|||+++++.+.++||+|||+|++++||||.+. .++|++||+||++|+||.+|+.|...
T Consensus 8 ~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~---------~e~f~~I~~AYevL~d~~~R~~~~~~ 71 (114)
T 1gh6_A 8 LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD---------EEKMKKMNTLYKKMEDGVKYAHQPDF 71 (114)
T ss_dssp HHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT---------TTTTHHHHHHHHHHHHHHHSCCSSCC
T ss_pred hhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc---------HHHHHHHHHHHHHHCCHHHHHHhhhc
Confidence 37999999999888766899999999999999999653 25788999999999999999999753
No 56
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.48 E-value=2.5e-14 Score=137.60 Aligned_cols=68 Identities=22% Similarity=0.347 Sum_probs=60.3
Q ss_pred CCCCccccCCCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCChhhHHHHHHHHHHHHHHHHHcCChhhhHHHHHHh
Q psy8852 1 MKNYFDFFNLPKCFNIDMDLLDKIYYNFQKKIHPDNFIQKSKIDQDASVKLSTYLNKAYSILKDPFLRSIYLCKL 75 (634)
Q Consensus 1 ~~~~~~~l~~~~~~~~~~~~i~~~y~~~~~~~HPD~~~~~~~~~~~~~~~~~~~i~~Ay~~L~d~~~r~~y~~~l 75 (634)
|+|||++|||+++ ++.++||+|||+|++++||||++..+. +.++|+.|++||++|+||.+|+.|+...
T Consensus 1 ~~~~y~~l~~~~~--a~~~~ik~ay~~l~~~~HPD~~~~~~~-----~~~~f~~i~~Ay~~L~~~~~r~~yd~~~ 68 (210)
T 3apq_A 1 IQNFYSLLGVSKT--ASSREIRQAFKKLALKLHPDKNPNNPN-----AHGDFLKINRAYEVLKDEDLRKKYDKYG 68 (210)
T ss_dssp CCCHHHHHTCCTT--CCHHHHHHHHHHHHHHHCGGGCTTCTT-----HHHHHHHHHHHHHHHTSHHHHHHHHHHT
T ss_pred CCCHHHHcCCCCC--CCHHHHHHHHHHHHHHHCcCCCCCChH-----HHHHHHHHHHHHHHhCCHHHHHHHHHhc
Confidence 7899999999996 557899999999999999999875542 5678999999999999999999998754
No 57
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.46 E-value=1.3e-14 Score=132.23 Aligned_cols=66 Identities=15% Similarity=0.241 Sum_probs=58.0
Q ss_pred CCCccccCCCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCChhhHHHHHHHHHHHHHHHHHcCChhhhHHH
Q psy8852 2 KNYFDFFNLPKCFNIDMDLLDKIYYNFQKKIHPDNFIQKSKIDQDASVKLSTYLNKAYSILKDPFLRSIY 71 (634)
Q Consensus 2 ~~~~~~l~~~~~~~~~~~~i~~~y~~~~~~~HPD~~~~~~~~~~~~~~~~~~~i~~Ay~~L~d~~~r~~y 71 (634)
.|||++|||++. ++.++||+|||+|++++||||+.+.+.+ ..+.+.|+.||+||++|+||.+|+.|
T Consensus 117 ~d~Y~vLgv~~~--As~~eIKkAYRklal~~HPDK~~~~~~e--~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 117 ETKWKPVGMADL--VTPEQVKKVYRKAVLVVHPDKATGQPYE--QYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp CCCCCCCCGGGG--SSHHHHHHHHHHHHHHTCGGGGSSCTTH--HHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred cchhhcCCCCCC--CCHHHHHHHHHHHHHHHCcCcCCCcchH--HHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 489999999995 5578999999999999999998765432 36889999999999999999999876
No 58
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.46 E-value=3.7e-15 Score=134.89 Aligned_cols=64 Identities=19% Similarity=0.176 Sum_probs=54.9
Q ss_pred CCCccccCCCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCChhhHHHHHHHHHHHHHHHHHcCChhhhHHHHHH
Q psy8852 2 KNYFDFFNLPKCFNIDMDLLDKIYYNFQKKIHPDNFIQKSKIDQDASVKLSTYLNKAYSILKDPFLRSIYLCK 74 (634)
Q Consensus 2 ~~~~~~l~~~~~~~~~~~~i~~~y~~~~~~~HPD~~~~~~~~~~~~~~~~~~~i~~Ay~~L~d~~~r~~y~~~ 74 (634)
+|||++|||+++++.|.++||+|||++++++||||.++ .++|++||+||++|+||.+|+.|+..
T Consensus 11 ~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~---------~e~F~~I~~AYevLsdp~kR~~YD~~ 74 (174)
T 2pf4_E 11 LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD---------EEKMKKMNTLYKKMEDGVKYAHQPDF 74 (174)
T ss_dssp HHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C---------CTTTTHHHHHHHHHHHHHHHHTSCGG
T ss_pred ccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCC---------HHHHHHHHHHHHHhCCHHHHHHHhcc
Confidence 37999999999888778899999999999999999643 24688999999999999999999763
No 59
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.43 E-value=4.6e-14 Score=117.94 Aligned_cols=62 Identities=18% Similarity=0.161 Sum_probs=54.1
Q ss_pred CCCccccCCCCCCCCCHHHHHHHHHHHHHhcCCCCCCC--CChhhHHHHHHHHHHHHHHHHHcCChh
Q psy8852 2 KNYFDFFNLPKCFNIDMDLLDKIYYNFQKKIHPDNFIQ--KSKIDQDASVKLSTYLNKAYSILKDPF 66 (634)
Q Consensus 2 ~~~~~~l~~~~~~~~~~~~i~~~y~~~~~~~HPD~~~~--~~~~~~~~~~~~~~~i~~Ay~~L~d~~ 66 (634)
.|||++||++. ++..+||+|||++++++||||+++ .+++.+..++++|+.|++||++|+||.
T Consensus 41 ~d~Y~vl~~~~---As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 41 SGWKPVPLMDM---IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp SCCCCCCGGGS---CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred CCHHHHcCCCC---CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 48999999985 567899999999999999999874 355566678899999999999999985
No 60
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.42 E-value=2.9e-14 Score=114.77 Aligned_cols=61 Identities=16% Similarity=0.105 Sum_probs=52.4
Q ss_pred CCCccccCCCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCChhhHHHHHHHHHHHHHHHHHcCChhhh
Q psy8852 2 KNYFDFFNLPKCFNIDMDLLDKIYYNFQKKIHPDNFIQKSKIDQDASVKLSTYLNKAYSILKDPFLR 68 (634)
Q Consensus 2 ~~~~~~l~~~~~~~~~~~~i~~~y~~~~~~~HPD~~~~~~~~~~~~~~~~~~~i~~Ay~~L~d~~~r 68 (634)
.++|++|||+++++ .++||+|||+|+++||||++... .+.+.++|++||+||++|+|+..|
T Consensus 16 ~~~y~vLgv~~~as--~~eIKkaYrkla~~~HPDk~~~~----~~~a~~~F~~I~~AYevL~~~~~r 76 (88)
T 1iur_A 16 KEVTSVVEQAWKLP--ESERKKIIRRLYLKWHPDKNPEN----HDIANEVFKHLQNEINRLEKQAFL 76 (88)
T ss_dssp HHHHHHHHHTTSSC--SHHHHHHHHHHHHHTCTTTSSSC----HHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhCCCCCCC--HHHHHHHHHHHHHHHCCCCCCCc----hHHHHHHHHHHHHHHHHHHhhccc
Confidence 37899999999655 66999999999999999996543 245788999999999999998777
No 61
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.38 E-value=1.4e-13 Score=110.89 Aligned_cols=59 Identities=14% Similarity=0.194 Sum_probs=50.2
Q ss_pred CCCccccCCCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCChhhHHHHHHHHHHHHHHHHHcCC
Q psy8852 2 KNYFDFFNLPKCFNIDMDLLDKIYYNFQKKIHPDNFIQKSKIDQDASVKLSTYLNKAYSILKD 64 (634)
Q Consensus 2 ~~~~~~l~~~~~~~~~~~~i~~~y~~~~~~~HPD~~~~~~~~~~~~~~~~~~~i~~Ay~~L~d 64 (634)
.++|++|||++.+ +..+||+|||+++++|||||+++.+. +..++++|+.|++||++|++
T Consensus 33 ~~~y~~Lgv~~~a--s~~eIKkAYRklal~~HPDK~~~~~~--~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLV--TPEQVKKVYRKAVLVVHPCKATGQPY--EQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSS--SHHHHHHHHHHHHHHTCHHHHTTSTT--HHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCC--CHHHHHHHHHHHHHHHCcCCCCCchh--HhHHHHHHHHHHHHHHHHHh
Confidence 3799999999964 57899999999999999999875432 24678899999999999975
No 62
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.37 E-value=4.3e-14 Score=143.31 Aligned_cols=66 Identities=21% Similarity=0.348 Sum_probs=0.0
Q ss_pred CCCCccccCCCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCChhhHHHHHHHHHHHHHHHHHcCChhhhHHHHHH
Q psy8852 1 MKNYFDFFNLPKCFNIDMDLLDKIYYNFQKKIHPDNFIQKSKIDQDASVKLSTYLNKAYSILKDPFLRSIYLCK 74 (634)
Q Consensus 1 ~~~~~~~l~~~~~~~~~~~~i~~~y~~~~~~~HPD~~~~~~~~~~~~~~~~~~~i~~Ay~~L~d~~~r~~y~~~ 74 (634)
++|||++|||+++++ .++||+|||+|+++||||++... .++++|++||+||++|+||.+|+.|+..
T Consensus 27 ~~d~Y~vLgv~~~as--~~eIk~aYr~la~~~HPDk~~~~------~a~~~f~~i~~Ay~vL~d~~~R~~YD~~ 92 (329)
T 3lz8_A 27 LKDYYAILGVQPTDD--LKTIKTAYRRLARKYHPDVSKEN------DAEAKFKDLAEAWEVLKDEQRRAEYDQL 92 (329)
T ss_dssp --------------------------------------------------------------------------
T ss_pred ccCHHHHcCcCCCCC--HHHHHHHHHHHHHHHCCCCCCCh------HHHHHHHHHHHHHHHhhhhhhhcccchh
Confidence 369999999999655 56999999999999999997532 3667899999999999999999999974
No 63
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=99.37 E-value=2.1e-11 Score=136.08 Aligned_cols=117 Identities=15% Similarity=0.242 Sum_probs=83.8
Q ss_pred cEEEEeCCCCCHHHHHHHHHH-HHHcCCceeeeecchhHHHHHhhhccCccceEEEEEEeCCCeEEEEEEEEeCCeEEEE
Q psy8852 263 GAVITVPAYFNDIQRQFTKNA-AKLAGLNVLRLLNEPTSAAIAYKLDKNIFEGIFAVYDLGGGTFDISILKFKNGVFKVL 341 (634)
Q Consensus 263 ~~viTVPa~~~~~qr~~l~~a-a~~aGl~~~~li~Ep~AAa~~y~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~ 341 (634)
.+++|.|..++...|+.|.+. .+..|++.+.++.++.+|+++++... -+|+|+|.+.|.++-+. +|.. +.
T Consensus 200 pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G~~t------glVVDiG~~~T~v~PV~--dG~~-l~ 270 (593)
T 4fo0_A 200 RCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSGLSS------TCIVDVGDQKTSVCCVE--DGVS-HR 270 (593)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHTCSE------EEEEEECSSCEEEEEEE--SSCB-CG
T ss_pred cEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCCCCc------eEEEEeCCCceeeeeeE--CCEE-eh
Confidence 499999999999999888775 66779999999999999999987554 48999999999988653 2211 11
Q ss_pred EEcCCCCccchhHHHHHHHHHHHHH-hhcc---CCHHHHHHHHHHHHHHHHHhcC
Q psy8852 342 SVGGDSNLGGDDFDYCLFSWIVKNA-FLKK---LSYKDVNILMIKSREIKELLSY 392 (634)
Q Consensus 342 ~~~~~~~lGG~~id~~l~~~l~~~~-~~~~---~~~~~~~~L~~~~e~~K~~Ls~ 392 (634)
.......+||.++++.|.++|..+- .... ..... +..++.+|+.++.
T Consensus 271 ~~~~rl~~GG~~lt~~L~~lL~~~~~~~~~~~~~~~~d----~~~v~~iKe~~c~ 321 (593)
T 4fo0_A 271 NTRLCLAYGGSDVSRCFYWLMQRAGFPYRECQLTNKMD----CLLLQHLKETFCH 321 (593)
T ss_dssp GGCEEESCCHHHHHHHHHHHHHHTTCSCTTCCTTCHHH----HHHHHHHHHHHCB
T ss_pred hheEEecccHHHHHHHHHHHHHhcCCCccccccccchh----HHHHHHHHHHhcc
Confidence 1112257899999999998887652 1111 11111 2456778887654
No 64
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.32 E-value=3e-13 Score=104.76 Aligned_cols=57 Identities=23% Similarity=0.233 Sum_probs=47.9
Q ss_pred CCCccccCCCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCChhhHHHHHHHHHHHHHHHHHcCChhhh
Q psy8852 2 KNYFDFFNLPKCFNIDMDLLDKIYYNFQKKIHPDNFIQKSKIDQDASVKLSTYLNKAYSILKDPFLR 68 (634)
Q Consensus 2 ~~~~~~l~~~~~~~~~~~~i~~~y~~~~~~~HPD~~~~~~~~~~~~~~~~~~~i~~Ay~~L~d~~~r 68 (634)
.++|++|||++. +++.++|+++||+|++++|||+.. + .+.|++||+||++|+|+..|
T Consensus 14 ~~~y~iLgl~~~-~a~~~eIk~ayr~l~~~~HPDk~g--~-------~~~f~~i~~Aye~L~~~~~r 70 (71)
T 2guz_A 14 KEALQILNLTEN-TLTKKKLKEVHRKIMLANHPDKGG--S-------PFLATKINEAKDFLEKRGIS 70 (71)
T ss_dssp HHHHHHTTCCTT-TCCHHHHHHHHHHHHHHHCGGGTC--C-------HHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHcCCCCC-CCCHHHHHHHHHHHHHHHCCCCCC--C-------HHHHHHHHHHHHHHhhhhhc
Confidence 378999999983 356789999999999999999932 1 24789999999999998766
No 65
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=99.27 E-value=1.1e-12 Score=136.77 Aligned_cols=195 Identities=18% Similarity=0.186 Sum_probs=134.3
Q ss_pred HHHHHHHHHHHHHc-CC--ceeeeecchhHHHHHhhhccCccceEEEEEEeCCCeEEEEEEEEeCCeEEEEEEcCCCCcc
Q psy8852 274 DIQRQFTKNAAKLA-GL--NVLRLLNEPTSAAIAYKLDKNIFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLG 350 (634)
Q Consensus 274 ~~qr~~l~~aa~~a-Gl--~~~~li~Ep~AAa~~y~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lG 350 (634)
..+-+.+.+|.+.+ |+ ++-. .||.||+++...+.. .+-.++++|+||||||++++.-+.-.+ ......|
T Consensus 367 ~~~m~NI~~cVer~~gL~veV~g--~ep~AAglaaLTeDE-~eLGvaiIDmGGGTTd~sVf~~G~lv~-----a~~ip~g 438 (610)
T 2d0o_A 367 RLQMAMIAREIEQKLNIDVQIGG--AEAEAAILGALTTPG-TTRPLAILDLGAGSTDASIINPKGDII-----ATHLAGA 438 (610)
T ss_dssp CCCHHHHHHHHHHHHCCEEEEEE--EHHHHHHHHHTTSTT-CCSSEEEEEECSSEEEEEEECTTCCEE-----EEEEECS
T ss_pred HHHHHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCC-CcCCeEEEEeCCCcceEEEEcCCcEEE-----EEEeccc
Confidence 34567888899999 99 6656 999999998877766 777899999999999999986555332 3336789
Q ss_pred chhHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHhcCC----------cceEEEE--EecC----Cc------ee
Q psy8852 351 GDDFDYCLFSWIVKNAFLKKLSYKDVNILMIKSREIKELLSYQ----------SSVKLNV--KLSD----KK------IV 408 (634)
Q Consensus 351 G~~id~~l~~~l~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~----------~~~~i~i--~~~~----g~------~~ 408 (634)
|++++..|..-| +... +..||++|. +... +...+.+ +-.+ .. ..
T Consensus 439 G~~VT~DIA~~L----gt~d---------~~~AErIK~-YG~A~ve~lf~~~dede~Iev~~~~lgp~~~~Rv~~~~~~~ 504 (610)
T 2d0o_A 439 GDMVTMIIAREL----GLED---------RYLAEEIKK-YPLAKVESLFHLRHEDGSVQFFSTPLPPAVFARVCVVKADE 504 (610)
T ss_dssp HHHHHHHHHHHH----TCCC---------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGTTCEEEECSSC
T ss_pred hHHHHHHHHHHh----CCCC---------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcceeeeeecccccc
Confidence 999999987432 2221 378899999 5321 1123444 1100 01 11
Q ss_pred EEEEeHHH--HHHHHHHHHHHHHHH--HHHHHHHcCC-----CcCCCCeEEEEcCCcCcHHHHHHHHhhccC-CcC----
Q psy8852 409 NITIDMKQ--FFTITQHLVNRTILL--SSKALMDANL-----TIKDINNVILVGGSTRMKHIHEGVSNFFKT-TLL---- 474 (634)
Q Consensus 409 ~~~itr~~--~e~~~~~~~~~~~~~--i~~~l~~~~~-----~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~-~~~---- 474 (634)
-..| +.. +|+ ++-+-+++.+. +..+|+..+. +..+|..|+|+||+|.++.+.++.++.|+. ++.
T Consensus 505 L~~I-~pR~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~GI~ElA~~iL~~y~VRiGrP 582 (610)
T 2d0o_A 505 LVPL-PGDLALEK-VRAIRRSAKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTDALAHYRLVAGRG 582 (610)
T ss_dssp EEEC-CTTCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHSSSSCGGGCCEEEEESGGGGCSSHHHHHHHHTTTSSCEEEEC
T ss_pred eeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCccCCCcccccCCEEEeCchhhcccHHHHHHHHhCcCCeEEecC
Confidence 2245 555 666 55555554443 2333544332 245679999999999999999999999977 442
Q ss_pred ---CCCChhhHHHHHHHHHHh
Q psy8852 475 ---TSIDPDKAVVFGAAIQAN 492 (634)
Q Consensus 475 ---~~~~p~~ava~GAa~~a~ 492 (634)
....|..|+|.|.+++..
T Consensus 583 ~~~gv~gP~fAtAvGLlly~~ 603 (610)
T 2d0o_A 583 NIRGSEGPRNAVATGLILSWH 603 (610)
T ss_dssp CGGGTSTTSCHHHHHHHHHHH
T ss_pred CccccCCCcHHHHHHHHHHHh
Confidence 246899999999998865
No 66
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=99.24 E-value=1.9e-12 Score=135.56 Aligned_cols=193 Identities=17% Similarity=0.145 Sum_probs=133.6
Q ss_pred HHHHHHHHHHHc-CC--ceeeeecchhHHHHHhhhccCccceEEEEEEeCCCeEEEEEEEEeCCeEEEEEEcCCCCccch
Q psy8852 276 QRQFTKNAAKLA-GL--NVLRLLNEPTSAAIAYKLDKNIFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGD 352 (634)
Q Consensus 276 qr~~l~~aa~~a-Gl--~~~~li~Ep~AAa~~y~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~ 352 (634)
+-+.+.+|.+.+ |+ ++-. .||.||+++...+.. .+-.++++|+||||||++++.-+.-.+ ......||+
T Consensus 371 ~m~NI~~~Ver~~gL~veV~g--~ep~AA~laaLTedE-~elGvaiIDmGgGTTd~sVf~~g~lv~-----a~~ip~gG~ 442 (607)
T 1nbw_A 371 QMQVIARELSARLQTEVVVGG--VEANMAIAGALTTPG-CAAPLAILDLGAGSTDAAIVNAEGQIT-----AVHLAGAGN 442 (607)
T ss_dssp CSCCHHHHHHHHHTSEEEECS--CHHHHHHHHHTTSTT-CCSSEEEEEECSSEEEEEEECSSSCEE-----EEEEECCHH
T ss_pred HHHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCC-CcCCeEEEEeCCCcceEEEEcCCcEEE-----EEEeccchH
Confidence 346678888888 99 5555 999999998877766 777899999999999999987655433 333678999
Q ss_pred hHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHhcCC----------cceEEEE--EecC----Cc------eeEE
Q psy8852 353 DFDYCLFSWIVKNAFLKKLSYKDVNILMIKSREIKELLSYQ----------SSVKLNV--KLSD----KK------IVNI 410 (634)
Q Consensus 353 ~id~~l~~~l~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~----------~~~~i~i--~~~~----g~------~~~~ 410 (634)
+++..|..-| +... +..||++|. +... +...+.+ +..+ .. ..-.
T Consensus 443 ~VT~DIA~~L----g~~d---------~~~AErIK~-YG~A~~e~lf~~~dede~Iev~~~~lgp~~~~R~~~~~~~~L~ 508 (607)
T 1nbw_A 443 MVSLLIKTEL----GLED---------LSLAEAIKK-YPLAKVESLFSIRHENGAVEFFREALSPAVFAKVVYIKEGELV 508 (607)
T ss_dssp HHHHHHHHHH----TCSC---------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGTTCEEEEETTEEE
T ss_pred HHHHHHHHHh----CCCC---------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcceeeeeeccccccee
Confidence 9999987432 2221 378899999 5321 1123444 1100 01 1112
Q ss_pred EEeHHH--HHHHHHHHHHHHHHH--HHHHHHHcCCC-----cCCCCeEEEEcCCcCcHHHHHHHHhhccC-CcC------
Q psy8852 411 TIDMKQ--FFTITQHLVNRTILL--SSKALMDANLT-----IKDINNVILVGGSTRMKHIHEGVSNFFKT-TLL------ 474 (634)
Q Consensus 411 ~itr~~--~e~~~~~~~~~~~~~--i~~~l~~~~~~-----~~~i~~ViLvGG~s~~p~v~~~l~~~f~~-~~~------ 474 (634)
.| +.. +|+ ++-+-+++.+. +...|+..+.. ..+|..|+|+||+|.++.+.++.++.|+. ++.
T Consensus 509 ~I-~~R~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~gI~elA~~iL~~~~VRiGrP~~ 586 (607)
T 1nbw_A 509 PI-DNASPLEK-IRLVRRQAKEKVFVTNCLRALRQVSPGGSIRDIAFVVLVGGSSLDFEIPQLITEALSHYGVVAGQGNI 586 (607)
T ss_dssp EE-CCSSCHHH-HHHHHHHHHHHHHHHHHHHHHSSSSTTCCSTTCCEEEEESGGGGSSSHHHHHHHHHHTTTCEEEECCG
T ss_pred ee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCcccCCcccccCCEEEeCchhhcccHHHHHHHHhCcCCeEEecCCc
Confidence 44 555 666 55555554443 44557766542 34679999999999999999999999976 432
Q ss_pred -CCCChhhHHHHHHHHHHh
Q psy8852 475 -TSIDPDKAVVFGAAIQAN 492 (634)
Q Consensus 475 -~~~~p~~ava~GAa~~a~ 492 (634)
....|..|+|.|.+++..
T Consensus 587 ~g~~gP~fAtAvGLlly~~ 605 (607)
T 1nbw_A 587 RGTEGPRNAVATGLLLAGQ 605 (607)
T ss_dssp GGTSCSCCHHHHHHHHHHH
T ss_pred cccCCchHHHHHHHHHhhh
Confidence 246899999999998753
No 67
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=98.99 E-value=4.8e-11 Score=137.55 Aligned_cols=65 Identities=23% Similarity=0.378 Sum_probs=37.6
Q ss_pred CCCccccCCCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCChhhHHHHHHHHHHHHHHHHHcCChhhhHHHHH
Q psy8852 2 KNYFDFFNLPKCFNIDMDLLDKIYYNFQKKIHPDNFIQKSKIDQDASVKLSTYLNKAYSILKDPFLRSIYLC 73 (634)
Q Consensus 2 ~~~~~~l~~~~~~~~~~~~i~~~y~~~~~~~HPD~~~~~~~~~~~~~~~~~~~i~~Ay~~L~d~~~r~~y~~ 73 (634)
+|||++|||+++ ++.++||+|||+|++++||||+++.+ .+.++|++|++||++|+||.+|+.|+.
T Consensus 21 ~~~y~~lg~~~~--a~~~~i~~ay~~l~~~~hpd~~~~~~-----~~~~~f~~i~~ay~~L~~~~~r~~yd~ 85 (780)
T 3apo_A 21 QNFYSLLGVSKT--ASSREIRQAFKKLALKLHPDKNPNNP-----NAHGDFLKINRAYEVLKDEDLRKKYDK 85 (780)
T ss_dssp --CHHHHTCCTT--CCHHHHHHHHCC----------------------------CTHHHHHHSHHHHHHHTT
T ss_pred CCHHHHcCCCCC--CCHHHHHHHHHHHHHHHCcCCCCCCh-----HHHHHHHHHHHHHHHHcChHHHHHHHh
Confidence 589999999995 55789999999999999999976432 256789999999999999999999986
No 68
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=98.83 E-value=2.8e-07 Score=91.44 Aligned_cols=172 Identities=12% Similarity=0.131 Sum_probs=97.9
Q ss_pred eeeeecchhHHHHHhhhccCccceEEEEEEeCCCeEEEEEEEEeCCeEEEEEEcCCCCccchhHHHHHHHHHHHHHhhcc
Q psy8852 291 VLRLLNEPTSAAIAYKLDKNIFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWIVKNAFLKK 370 (634)
Q Consensus 291 ~~~li~Ep~AAa~~y~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~ 370 (634)
...+++|.+|.+.+...-.+ ... .|+|+||+++.+..+ .++.+.-..... ...||.- .+.+++...++...
T Consensus 76 ~~~~v~Ei~ah~~ga~~~~~-~~~--~vidiGGqd~k~i~~--~~g~v~~~~mn~-~ca~GtG---~~le~~a~~lg~~~ 146 (270)
T 1hux_A 76 ADKQMSELSCHAMGASFIWP-NVH--TVIDIGGQDVKVIHV--ENGTMTNFQMND-KCAAGTG---RFLDVMANILEVKV 146 (270)
T ss_dssp CSEEECHHHHHHHHHHHHCT-TCC--EEEEEETTEEEEEEE--ETTEEEEEEEES-SCCTTSH---HHHHHHHHHHTCCT
T ss_pred CCCCcccHHHHHHHHHHhCC-CCC--EEEEECCCceEEEEE--eCCceeeecccc-ccchhhH---HHHHHHHHHhCCCH
Confidence 34679999999865433322 222 589999998887766 566543222222 2222331 35566666555432
Q ss_pred CCHHHHHHHHHHHHHHHHHhcCCcceEEEEEecCCceeEEEEeHHHH----------HHHHHHHHHHHHHHHHHHHHHcC
Q psy8852 371 LSYKDVNILMIKSREIKELLSYQSSVKLNVKLSDKKIVNITIDMKQF----------FTITQHLVNRTILLSSKALMDAN 440 (634)
Q Consensus 371 ~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~g~~~~~~itr~~~----------e~~~~~~~~~~~~~i~~~l~~~~ 440 (634)
. +.++... .... ++.+ +.. ...+.+.++ ++++..+++.+...+.+.++..+
T Consensus 147 ---~-------el~~la~--~~~~--p~~~----~~~-c~vfa~s~v~~l~~~g~~~~di~~av~e~Va~~i~~~~~~~~ 207 (270)
T 1hux_A 147 ---S-------DLAELGA--KSTK--RVAI----SST-CTVFAESEVISQLSKGTDKIDIIAGIHRSVASRVIGLANRVG 207 (270)
T ss_dssp ---T-------THHHHHT--TCCS--CCCC----CCC-SHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ---H-------HHHHHHh--hCCC--CCCc----ccc-cchhHhHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 1 1111110 0000 0000 000 001122222 33334444444444444444332
Q ss_pred CCcCCCCeEEEEcCCcCcHHHHHHHHhhccCCcCCCCChhhHHHHHHHHHHhHh
Q psy8852 441 LTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLLTSIDPDKAVVFGAAIQANFL 494 (634)
Q Consensus 441 ~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~~ 494 (634)
. .+.|+++||.+++|.+++.+++.++.++..+.+|..+.|.|||++|...
T Consensus 208 ~----~~~i~~~GG~a~n~~~~~~~~~~lg~~v~~p~~~~~~~AlGAAl~A~~~ 257 (270)
T 1hux_A 208 I----VKDVVMTGGVAQNYGVRGALEEGLGVEIKTSPLAQYNGALGAALYAYKK 257 (270)
T ss_dssp C----CSSEEEESGGGGCHHHHHHHHHHHCSCEECCGGGGGHHHHHHHHHHHHH
T ss_pred C----CCeEEEeCccccCHHHHHHHHHHHCCCeEeCCCcchHhHHHHHHHHHHh
Confidence 1 3679999999999999999999999999888888889999999998754
No 69
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=98.36 E-value=2.6e-05 Score=77.13 Aligned_cols=75 Identities=7% Similarity=0.044 Sum_probs=55.4
Q ss_pred EeHHHHH-HHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcC-CcCcHHHHHHHHhhc---cCCcCCCCChhhHHHHH
Q psy8852 412 IDMKQFF-TITQHLVNRTILLSSKALMDANLTIKDINNVILVGG-STRMKHIHEGVSNFF---KTTLLTSIDPDKAVVFG 486 (634)
Q Consensus 412 itr~~~e-~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG-~s~~p~v~~~l~~~f---~~~~~~~~~p~~ava~G 486 (634)
.+++++. .++..+.+++..+.....+..+ ++.|+++|| .+..|.+++.+++.+ +.+++.+.+|..+.|.|
T Consensus 207 ~~~eDIaasl~~sV~~~I~~la~~~a~~~~-----i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~~~~~~~p~~~~~~gAlG 281 (287)
T 2ews_A 207 FTPSNKLAAVIGVVGEVVTTMAITVAREFK-----TENIVYIGSSFHNNALLRKVVEDYTVLRGCKPYYVENGAFSGAIG 281 (287)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----CCEEEEESGGGTTCHHHHHHHHHHHHHTTCEEEECTTGGGHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----CCeEEEeCCchhcCHHHHHHHHHHHhhCCceEEECCCccHHHHHH
Confidence 4566655 3444455555555554444443 557999999 899999999999975 67788899999999999
Q ss_pred HHHHH
Q psy8852 487 AAIQA 491 (634)
Q Consensus 487 Aa~~a 491 (634)
||+.+
T Consensus 282 AaL~~ 286 (287)
T 2ews_A 282 ALYLE 286 (287)
T ss_dssp HHHTC
T ss_pred HHHhC
Confidence 99864
No 70
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.36 E-value=4.2e-07 Score=96.66 Aligned_cols=68 Identities=21% Similarity=0.359 Sum_probs=55.2
Q ss_pred CCCccccCCCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCChhhHHHHHHHHHHHHHHHHHcCChhhhHHHHH
Q psy8852 2 KNYFDFFNLPKCFNIDMDLLDKIYYNFQKKIHPDNFIQKSKIDQDASVKLSTYLNKAYSILKDPFLRSIYLC 73 (634)
Q Consensus 2 ~~~~~~l~~~~~~~~~~~~i~~~y~~~~~~~HPD~~~~~~~~~~~~~~~~~~~i~~Ay~~L~d~~~r~~y~~ 73 (634)
.+||+.||+++..+ ..+++++|+++++++|||+++. +.++..+++.|..|++||++|+||.+|..|+-
T Consensus 382 ~~~y~~lg~~~~~~--~~~~~~~y~~~~l~~~pd~~~~--~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~ 449 (450)
T 2y4t_A 382 RDYYKILGVKRNAK--KQEIIKAYRKLALQWHPDNFQN--EEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD 449 (450)
T ss_dssp CCSGGGSCSSTTCC--TTHHHHHHHHHHHHSCGGGCCS--HHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred hhHHHHhCCCccCC--HHHHHHHHHHHHHHhCCCCCCC--chHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence 48999999999765 4599999999999999999753 34467788999999999999999999999973
No 71
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.14 E-value=1.3e-06 Score=65.15 Aligned_cols=53 Identities=15% Similarity=0.133 Sum_probs=40.7
Q ss_pred CccccCCCCCC-CCCHHHHHHHHHHHHHhcCCCCCCCCChhhHHHHHHHHHHHHHHHHHcCCh
Q psy8852 4 YFDFFNLPKCF-NIDMDLLDKIYYNFQKKIHPDNFIQKSKIDQDASVKLSTYLNKAYSILKDP 65 (634)
Q Consensus 4 ~~~~l~~~~~~-~~~~~~i~~~y~~~~~~~HPD~~~~~~~~~~~~~~~~~~~i~~Ay~~L~d~ 65 (634)
-|.+|||+++. .++.++|+++||+|....||||- -+. -..+.||+|++.|...
T Consensus 6 A~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkG--GS~-------yl~~ki~~Ake~l~~~ 59 (65)
T 2guz_B 6 SCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKG--GSF-------YLQSKVYRAAERLKWE 59 (65)
T ss_dssp HHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGT--CCH-------HHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCC--CCH-------HHHHHHHHHHHHHHHH
Confidence 36899999851 15678999999999999999993 221 3445799999998644
No 72
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=97.95 E-value=1.5e-05 Score=86.20 Aligned_cols=142 Identities=13% Similarity=0.227 Sum_probs=98.0
Q ss_pred HhHHHHHHHHHHHHHHHHhCCCc-----CcEEEEeCCCCCHHHHHHHHHHH-HHcCCceeeeecchhHHHHHhhhccCcc
Q psy8852 239 IEISAQIFITLKKIAENAVNNRI-----FGAVITVPAYFNDIQRQFTKNAA-KLAGLNVLRLLNEPTSAAIAYKLDKNIF 312 (634)
Q Consensus 239 ~~v~~~~L~~l~~~a~~~~~~~~-----~~~viTVPa~~~~~qr~~l~~aa-~~aGl~~~~li~Ep~AAa~~y~~~~~~~ 312 (634)
.+.+..++.|+... ..++... ..+++|.|..+....|+.|.+++ +..|++.+.++.+|.+|+++++.
T Consensus 196 WD~mE~Iw~y~f~~--~~L~V~p~~~~e~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl----- 268 (655)
T 4am6_A 196 ISDVTKLLEHALNS--ETLNVKPTKFNQYKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGI----- 268 (655)
T ss_dssp HHHHHHHHHHHHBS--SSCBCCGGGGGGCEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCC-----
T ss_pred HHHHHHHHHHHhcc--ccccccccccCCCcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCC-----
Confidence 45566666665431 1333332 46999999999999999998876 56899999999999999998864
Q ss_pred ceEEEEEEeCCCeEEEEEEEEeCCeEEEEEEcCCCCccchhHHHHHHHHHHHHHh-hc--cCCHHHHHHHHHHHHHHHHH
Q psy8852 313 EGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFDYCLFSWIVKNAF-LK--KLSYKDVNILMIKSREIKEL 389 (634)
Q Consensus 313 ~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~-~~--~~~~~~~~~L~~~~e~~K~~ 389 (634)
..+-+|+|+|+|+|+++.+. +|.. +........+||.++|+.|.+++.++-- .. ..+.. .=...++.+|+.
T Consensus 269 ~ttGLVVDiG~g~T~VvPV~--eG~v-l~~ai~rL~iGG~dLT~yL~kLL~~rgypy~~~~f~t~---~e~eiVrdIKEk 342 (655)
T 4am6_A 269 STSTCVVNIGAAETRIACVD--EGTV-LEHSAITLDYGGDDITRLFALFLLQSDFPLQDWKIDSK---HGWLLAERLKKN 342 (655)
T ss_dssp SSCEEEEEECSSCEEEEEEE--TTEE-CGGGCEEESCCHHHHHHHHHHHHHHTTCSCCSCCTTSH---HHHHHHHHHHHH
T ss_pred CCceEEEcCCCceEEEEEEe--CCEE-EhhheeeecchHHHHHHHHHHHHHHcCCCccccCCCCc---chHHHHHHHHHh
Confidence 12359999999999999873 3321 1111123689999999999999887621 10 01111 113567888888
Q ss_pred hcCC
Q psy8852 390 LSYQ 393 (634)
Q Consensus 390 Ls~~ 393 (634)
++.-
T Consensus 343 ~CyV 346 (655)
T 4am6_A 343 FTTF 346 (655)
T ss_dssp HCCC
T ss_pred eEEE
Confidence 8766
No 73
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=97.04 E-value=0.013 Score=58.97 Aligned_cols=79 Identities=19% Similarity=0.175 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHcCCceeeeecchhHHHHHhhhccCc-cceEEEEEEeCCCeEEEEEEEEeCCeEEEEEEcCCCCccchhH
Q psy8852 276 QRQFTKNAAKLAGLNVLRLLNEPTSAAIAYKLDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDF 354 (634)
Q Consensus 276 qr~~l~~aa~~aGl~~~~li~Ep~AAa~~y~~~~~~-~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~i 354 (634)
....+..+-+..|++.-.+-.|.+|...+.+....- .....+|+|+|||+|.+++.+ ++.+ .. ..+.++|+..+
T Consensus 99 ~~~fl~~v~~~~G~~i~vIsg~eEA~l~~~gv~~~l~~~~~~lvvDIGGGStEl~~~~--~~~~--~~-~~Sl~~G~v~l 173 (315)
T 1t6c_A 99 AEEFLERVKREVGLVVEVITPEQEGRYAYLAVAYSLKPEGEVCVVDQGGGSTEYVFGK--GYKV--RE-VISLPIGIVNL 173 (315)
T ss_dssp HHHHHHHHHHHTCCCEEECCHHHHHHHHHHHHHHHTCCCSEEEEEEEETTEEEEEEEE--TTEE--EE-EEEECCCHHHH
T ss_pred HHHHHHHHHHHHCCCEEEcCHHHHHHHHHHHHHhhcccCCCEEEEEeCCCcEEEEEEe--CCce--ee-EEEEeccHHHH
Confidence 345556666678998866666666665554443321 256799999999999999865 4433 22 23378999988
Q ss_pred HHHHH
Q psy8852 355 DYCLF 359 (634)
Q Consensus 355 d~~l~ 359 (634)
.+.+.
T Consensus 174 ~e~~~ 178 (315)
T 1t6c_A 174 TETFF 178 (315)
T ss_dssp HHHHC
T ss_pred HHHhc
Confidence 87763
No 74
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=96.82 E-value=0.0033 Score=63.75 Aligned_cols=46 Identities=15% Similarity=0.062 Sum_probs=40.3
Q ss_pred CCeEEEEcC-CcCcHHHHHHHHhhcc------CCcCCCCChhhHHHHHHHHHH
Q psy8852 446 INNVILVGG-STRMKHIHEGVSNFFK------TTLLTSIDPDKAVVFGAAIQA 491 (634)
Q Consensus 446 i~~ViLvGG-~s~~p~v~~~l~~~f~------~~~~~~~~p~~ava~GAa~~a 491 (634)
++.|+++|| .+..|.+++.|++.++ .+++.+.+|..+.|.|||+.+
T Consensus 306 i~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~~~~~~~~~~y~GAlGAaL~~ 358 (360)
T 2i7n_A 306 IDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYFGAVGALLEL 358 (360)
T ss_dssp CCCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEETTTTCHHHHHHHHHH
T ss_pred CCeEEEeCcccccCHHHHHHHHHHHhhhhcCCeeEEEcCCccHHHHHHHHHHh
Confidence 457999999 9999999999999863 567778899999999999975
No 75
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=96.74 E-value=0.12 Score=51.91 Aligned_cols=43 Identities=21% Similarity=0.137 Sum_probs=29.0
Q ss_pred cCCceeeeecchhHHHHHhhhcc-CccceEEEEEEeCCCeEEEEEE
Q psy8852 287 AGLNVLRLLNEPTSAAIAYKLDK-NIFEGIFAVYDLGGGTFDISIL 331 (634)
Q Consensus 287 aGl~~~~li~Ep~AAa~~y~~~~-~~~~~~vlV~D~GggT~dvsv~ 331 (634)
.|++ +.+.++..|+|++..... ....++++++-+|.| .-..++
T Consensus 96 ~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~gii 139 (321)
T 3vgl_A 96 VGLP-VVVENDANAAAWGEYRFGAGQGHDDVICITLGTG-LGGGII 139 (321)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEEehhhhHHHHHHHhCCCCCCCCEEEEEeCcc-eEEEEE
Confidence 4776 689999999999754322 223456788888887 445544
No 76
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=96.69 E-value=0.26 Score=49.49 Aligned_cols=49 Identities=22% Similarity=0.299 Sum_probs=33.1
Q ss_pred CCeEEEEcCCcC-cHHHHHHHHhhccC----------CcCCCCChhhHHHHHHHHHHhHh
Q psy8852 446 INNVILVGGSTR-MKHIHEGVSNFFKT----------TLLTSIDPDKAVVFGAAIQANFL 494 (634)
Q Consensus 446 i~~ViLvGG~s~-~p~v~~~l~~~f~~----------~~~~~~~p~~ava~GAa~~a~~~ 494 (634)
++.|+|.||.+. .+.+.+.+++.+.. ++..+.....+.+.||+.++...
T Consensus 263 p~~IvlgGg~~~~~~~~~~~l~~~l~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~l~~~~ 322 (326)
T 2qm1_A 263 PDSVVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKLAELGNEAGVIGAASLALQF 322 (326)
T ss_dssp CSEEEEEESGGGGTHHHHHHHHHHHHHTSCHHHHTTSEEEECSSGGGHHHHHHHHHGGGG
T ss_pred CCEEEEcChhhhchHHHHHHHHHHHHHhhhhccCCCcEEEEcCcCchHHHHHHHHHHHHh
Confidence 568999999886 57777777665521 22223345678999999987543
No 77
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=96.65 E-value=0.35 Score=48.66 Aligned_cols=47 Identities=26% Similarity=0.259 Sum_probs=33.0
Q ss_pred CCCeEEEEcCCcCcHHHHHHHHhhccCC---------cCCCCChhhHHHHHHHHHH
Q psy8852 445 DINNVILVGGSTRMKHIHEGVSNFFKTT---------LLTSIDPDKAVVFGAAIQA 491 (634)
Q Consensus 445 ~i~~ViLvGG~s~~p~v~~~l~~~f~~~---------~~~~~~p~~ava~GAa~~a 491 (634)
+++.|+|-||.+..+.+.+.+++.+... +..+.-...+.++|||.++
T Consensus 269 ~p~~IvlgGgi~~~~~l~~~l~~~l~~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~ 324 (327)
T 4db3_A 269 DPHVVALGGGLSNFELIYEEMPKRVPKYLLSVAKCPKIIKAKHGDSGGVRGAAFLN 324 (327)
T ss_dssp CCSEEEEESGGGGCTHHHHHHHHHGGGGSCTTCCCCEEEECSCGGGHHHHHHHHTT
T ss_pred CCCEEEEeCcccchHHHHHHHHHHHHHHhccccCCCEEEECCCCCcHHHHHHHHHH
Confidence 3578999999988877777777665321 1223345688999999865
No 78
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=96.62 E-value=0.25 Score=49.70 Aligned_cols=48 Identities=21% Similarity=0.210 Sum_probs=32.8
Q ss_pred CCCeEEEEcCCcCc-HHHHHHHHhhcc----------CCcCCCCChhhHHHHHHHHHHh
Q psy8852 445 DINNVILVGGSTRM-KHIHEGVSNFFK----------TTLLTSIDPDKAVVFGAAIQAN 492 (634)
Q Consensus 445 ~i~~ViLvGG~s~~-p~v~~~l~~~f~----------~~~~~~~~p~~ava~GAa~~a~ 492 (634)
+++.|+|-||.++. +.+.+.|++.+. .++..+.....+.++|||.++.
T Consensus 260 dP~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~l~~ 318 (321)
T 3r8e_A 260 DLNNILLGGGISGAFDYFVPNLKKAMLEHLPTYYTDDMYIGKATLENDAGLLGAAGLIM 318 (321)
T ss_dssp CCCEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSSGGGHHHHHHHHHHH
T ss_pred CCCEEEEeChhcccchHHHHHHHHHHHHhcccccCCCCEEEEcCCCCcHHHHHHHHHHH
Confidence 35789999998876 666666555442 1233445567899999998874
No 79
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=96.60 E-value=0.72 Score=46.45 Aligned_cols=65 Identities=12% Similarity=0.187 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhhc---cCCcCCCCC---hhhHHHHHHHHHHhHh
Q psy8852 425 VNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFF---KTTLLTSID---PDKAVVFGAAIQANFL 494 (634)
Q Consensus 425 ~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f---~~~~~~~~~---p~~ava~GAa~~a~~~ 494 (634)
.+.+...++++.+..+ ++.|+|+||.+....+++.|.+.+ |.+++.+.. .|.+++.|++.+....
T Consensus 229 ~~~l~~~~~~~~~~~~-----~~~vvlsGGVa~N~~l~~~l~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~ 299 (330)
T 2ivn_A 229 FAALVEVTERAVAHTE-----KDEVVLVGGVAANNRLREMLRIMTEDRGIKFFVPPYDLCRDNGAMIAYTGLRMYK 299 (330)
T ss_dssp HHHHHHHHHHHHHHHC-----CSEEEEESGGGGCHHHHHHHHHHHHHHTCEEECCCHHHHSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhC-----CCeEEEEccHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChhHHHHHHHHHHHHh
Confidence 3444555555555443 568999999999999999999877 555555432 2467889988765443
No 80
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=96.50 E-value=0.0051 Score=67.30 Aligned_cols=84 Identities=13% Similarity=0.160 Sum_probs=61.6
Q ss_pred EEeHHHHHHHHHHHHHHHHHHHHHH---HHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhhccCCcCCCCChhhHHHHHH
Q psy8852 411 TIDMKQFFTITQHLVNRTILLSSKA---LMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLLTSIDPDKAVVFGA 487 (634)
Q Consensus 411 ~itr~~~e~~~~~~~~~~~~~i~~~---l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~ava~GA 487 (634)
.-+|.++..++..+++.+.-.++.. |++.+ ..++.|.++||+++++.+.+.+.+.||.++..+. ..++.|.||
T Consensus 408 ~~~~~~l~r~~rAvlEgia~~~r~~~e~l~~~g---~~~~~i~~~GG~aks~~~~Qi~ADv~g~pV~~~~-~~e~~alGA 483 (554)
T 3l0q_A 408 STTPEDMALRYLATIQALALGTRHIIETMNQNG---YNIDTMMASGGGTKNPIFVQEHANATGCAMLLPE-ESEAMLLGS 483 (554)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT---CCCCEEEEESGGGGCHHHHHHHHHHHCCEEEEES-CSCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC---CCCCEEEEeCccccCHHHHHHHHHhhCCeEEecC-CCcchHHHH
Confidence 4578888544445555444444333 34444 3588999999999999999999999999987644 457899999
Q ss_pred HHHHhHhcCCC
Q psy8852 488 AIQANFLSGNR 498 (634)
Q Consensus 488 a~~a~~~~~~~ 498 (634)
|+.|+.-.+.+
T Consensus 484 A~lA~~a~G~~ 494 (554)
T 3l0q_A 484 AMMGTVAAGVF 494 (554)
T ss_dssp HHHHHHHTTSS
T ss_pred HHHHHHHcCCc
Confidence 99998766654
No 81
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=96.35 E-value=0.0071 Score=65.41 Aligned_cols=80 Identities=16% Similarity=0.234 Sum_probs=57.1
Q ss_pred eHHHHHHH-HHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhhccCCcCCCCChhhHHHHHHHHHH
Q psy8852 413 DMKQFFTI-TQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLLTSIDPDKAVVFGAAIQA 491 (634)
Q Consensus 413 tr~~~e~~-~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a 491 (634)
++.++-.. ++.+.-.+...+ +.|++.+. .++.|.++||+++++.+.+.+.+.+|.++..+. +.++.|+|||+.|
T Consensus 395 ~~~~l~RAvlEgia~~~r~~l-~~l~~~g~---~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~~-~~e~~alGAA~lA 469 (515)
T 3i8b_A 395 TRENLARAFVEGLLCSQRDCL-ELIRSLGA---SITRILLIGGGAKSEAIRTLAPSILGMDVTRPA-TDEYVAIGAARQA 469 (515)
T ss_dssp SHHHHHHHHHHHHHHHHHHHH-HHHHHTTC---CCCEEEEESGGGGCHHHHHHHHHHHTSCEEEEC-CCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHH-HHHHHcCC---CCCEEEEECchhcCHHHHHHHHHHhCCceEecC-CcccHHHHHHHHH
Confidence 66665543 333333333333 34455554 478999999999999999999999999987643 4578899999999
Q ss_pred hHhcCC
Q psy8852 492 NFLSGN 497 (634)
Q Consensus 492 ~~~~~~ 497 (634)
+.-.+.
T Consensus 470 ~~a~G~ 475 (515)
T 3i8b_A 470 AWVLSG 475 (515)
T ss_dssp HHHHHC
T ss_pred HHHcCC
Confidence 865543
No 82
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=96.33 E-value=0.0089 Score=64.93 Aligned_cols=85 Identities=13% Similarity=0.162 Sum_probs=60.9
Q ss_pred EEeHHHHHHH-HHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhhccCCcCCCCChhhHHHHHHHH
Q psy8852 411 TIDMKQFFTI-TQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLLTSIDPDKAVVFGAAI 489 (634)
Q Consensus 411 ~itr~~~e~~-~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~ava~GAa~ 489 (634)
.-+|.++... ++.+.-.+...++..-+..+. .++.|.++||+++++.+.+.+.+.||.++..+. ..|+.|+|||+
T Consensus 370 ~~~~~~i~RAvlEgia~~~r~~le~l~~~~g~---~~~~i~v~GGgaks~~~~Qi~ADvlg~pV~~~~-~~E~~alGAA~ 445 (526)
T 3ezw_A 370 GVNANHIIRATLESIAYQTRDVLEAMQADSGI---RLHALRVDGGAVANNFLMQFQSDILGTRVERPE-VREVTALGAAY 445 (526)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CCSEEEEESGGGGCHHHHHHHHHHHTSEEEEES-CCCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCCEEEEECchhhCHHHHHHHHHHHCCEEEeCC-CCchHHHHHHH
Confidence 3466666533 333333444444443334554 478999999999999999999999999987644 45789999999
Q ss_pred HHhHhcCCCC
Q psy8852 490 QANFLSGNRG 499 (634)
Q Consensus 490 ~a~~~~~~~~ 499 (634)
.|+.-.|.++
T Consensus 446 lA~~a~G~~~ 455 (526)
T 3ezw_A 446 LAGLAVGFWQ 455 (526)
T ss_dssp HHHHHTTSSS
T ss_pred HHHHHhCCCC
Confidence 9988777654
No 83
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=96.30 E-value=0.0087 Score=64.70 Aligned_cols=81 Identities=15% Similarity=0.088 Sum_probs=57.3
Q ss_pred EeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhhccCCc-CCCCChhhHHHHHHHHH
Q psy8852 412 IDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTL-LTSIDPDKAVVFGAAIQ 490 (634)
Q Consensus 412 itr~~~e~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~-~~~~~p~~ava~GAa~~ 490 (634)
-++.++.. .+++.+.-.++..++...- .. ++.|.++||+++++.+.+.+.+.+|.++ .. ..+.++.|.|||+.
T Consensus 374 ~~~~~l~R---AvlEgia~~~~~~~~~l~~-g~-~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~~e~~alGaA~l 447 (511)
T 3hz6_A 374 TTRAQILL---AVLEGAALSLRWCAELLGM-EK-VGLLKVVGGGARSEAWLRMIADNLNVSLLVK-PDAHLHPLRGLAAL 447 (511)
T ss_dssp CCHHHHHH---HHHHHHHHHHHHHHHHHTG-GG-CCEEEEESGGGGCHHHHHHHHHHHTCEEEEC-CCGGGHHHHHHHHH
T ss_pred CCHHHHHH---HHHHHHHHHHHHHHHHHhc-CC-CCEEEEeCchhcCHHHHHHHHHHHCCeeEEe-cCCCCchHHHHHHH
Confidence 35666643 3333333333333332222 23 7899999999999999999999999998 65 45789999999999
Q ss_pred HhHhcCCC
Q psy8852 491 ANFLSGNR 498 (634)
Q Consensus 491 a~~~~~~~ 498 (634)
|+.-.+..
T Consensus 448 A~~a~G~~ 455 (511)
T 3hz6_A 448 AAVELEWS 455 (511)
T ss_dssp HHHHTTSC
T ss_pred HHHHhCCc
Confidence 98766644
No 84
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=96.27 E-value=0.0064 Score=65.33 Aligned_cols=82 Identities=13% Similarity=0.092 Sum_probs=57.5
Q ss_pred eHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhhccCCcCCCCChhhHHHHHHHHHH
Q psy8852 413 DMKQFFT-ITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLLTSIDPDKAVVFGAAIQA 491 (634)
Q Consensus 413 tr~~~e~-~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a 491 (634)
++.++-. +++.+.-.+...++ .|++.+ ..++.|.++||+++++.+.+.+.+.+|.++..+..++.+.|.|||+.|
T Consensus 357 ~~~~~~rAvlEgia~~~~~~~~-~l~~~g---~~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~~~~e~~~alGAA~lA 432 (484)
T 2itm_A 357 GPNELARAVLEGVGYALADGMD-VVHACG---IKPQSVTLIGGGARSEYWRQMLADISGQQLDYRTGGDVGPALGAARLA 432 (484)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH-HHHTTT---CCCSCEEEESGGGCCHHHHHHHHHHHCCCEEEESCTTSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHH-HHHHcC---CCcceEEEEeccccCHHHHHHHHHHhCCeEEeCCCCCcccHHHHHHHH
Confidence 5666543 33333333333333 334433 347889999999999999999999999999876665545899999999
Q ss_pred hHhcCCC
Q psy8852 492 NFLSGNR 498 (634)
Q Consensus 492 ~~~~~~~ 498 (634)
+.-.+..
T Consensus 433 ~~~~g~~ 439 (484)
T 2itm_A 433 QIAANPE 439 (484)
T ss_dssp HHHHCTT
T ss_pred HHHcCCc
Confidence 8765543
No 85
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=96.26 E-value=0.0085 Score=65.23 Aligned_cols=77 Identities=12% Similarity=0.212 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhhccCCcCCCCChhhHHHHHHHHHHhHhcC
Q psy8852 419 TITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLLTSIDPDKAVVFGAAIQANFLSG 496 (634)
Q Consensus 419 ~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~~~~ 496 (634)
.++..+++.+.-.++..++..+.....++.|.++||+++++.+.+.+.+.||.++..+ .+.++.|+|||+.|+.-.+
T Consensus 408 ~l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~lA~~a~G 484 (538)
T 4bc3_A 408 VEVRALIEGQFMAKRIHAEGLGYRVMSKTKILATGGASHNREILQVLADVFDAPVYVI-DTANSACVGSAYRAFHGLA 484 (538)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCTTCCEEEEEGGGGCHHHHHHHHHHHTSCEEEC-CCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCCCeEEEEcchhcCHHHHHHHHHHhCCceEec-CCCCchHHHHHHHHHHHhC
Confidence 3344444444444455555544444457899999999999999999999999998764 4567999999999876544
No 86
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=96.25 E-value=0.012 Score=63.38 Aligned_cols=82 Identities=11% Similarity=0.115 Sum_probs=58.2
Q ss_pred eHHHHHHHH-HHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhhccCCcCCCCChhhHHHHHHHHHH
Q psy8852 413 DMKQFFTIT-QHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLLTSIDPDKAVVFGAAIQA 491 (634)
Q Consensus 413 tr~~~e~~~-~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a 491 (634)
++.++-..+ +.+.-.+...+ +.|++.+. .++.|.++||+++++.+.+.+.+.+|.++..+. +.++.|.|||+.|
T Consensus 364 ~~~~l~RAvlEgia~~~r~~~-~~l~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~-~~e~~alGaA~lA 438 (504)
T 3ll3_A 364 QKPEMARAVIEGIIFNLYDAA-SNLIKNTK---KPVAINATGGFLKSDFVRQLCANIFNVPIVTMK-EQQSGTLAAMFLA 438 (504)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH-HHHHTTSC---CCSEEEEESGGGCSHHHHHHHHHHHTSCEEEES-CSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHH-HHHHHcCC---CCCEEEEeCchhcCHHHHHHHHHhhCCeEEecC-CCCchhHHHHHHH
Confidence 566665433 33333333333 33444442 588999999999999999999999999987643 5578999999999
Q ss_pred hHhcCCCC
Q psy8852 492 NFLSGNRG 499 (634)
Q Consensus 492 ~~~~~~~~ 499 (634)
+.-.+..+
T Consensus 439 ~~a~G~~~ 446 (504)
T 3ll3_A 439 RQALGLNQ 446 (504)
T ss_dssp HHHTTSCC
T ss_pred HHHcCccC
Confidence 87666543
No 87
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=96.24 E-value=0.0092 Score=64.33 Aligned_cols=81 Identities=11% Similarity=0.196 Sum_probs=56.9
Q ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhhccCCcCCCCChhhHHHHHHHHHHh
Q psy8852 413 DMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLLTSIDPDKAVVFGAAIQAN 492 (634)
Q Consensus 413 tr~~~e~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~ 492 (634)
++.++-. .+++.+.-.++..++...... .++.|.++||+++++.+.+.+.+.+|.++..+.. .++.|.|||+.|+
T Consensus 365 ~~~~l~r---AvlEgia~~~~~~l~~l~~~~-~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~~~-~e~~alGaA~lA~ 439 (497)
T 2zf5_O 365 GREHLAR---ATLEAIAYLTRDVVDEMEKLV-QIKELRVDGGATANDFLMQFQADILNRKVIRPVV-KETTALGAAYLAG 439 (497)
T ss_dssp CHHHHHH---HHHHHHHHHHHHHHHHHTTTS-CCCCEEEESGGGGCHHHHHHHHHHHTSCEEEESC-SCHHHHHHHHHHH
T ss_pred CHHHHHH---HHHHHHHHHHHHHHHHHHhcC-CcceEEEeCccccCHHHHHHHHhhcCCeEEEcCC-CcchHHHHHHHHH
Confidence 5555543 334444444444444333222 5789999999999999999999999999876543 4689999999998
Q ss_pred HhcCCC
Q psy8852 493 FLSGNR 498 (634)
Q Consensus 493 ~~~~~~ 498 (634)
.-.+..
T Consensus 440 ~~~g~~ 445 (497)
T 2zf5_O 440 LAVDYW 445 (497)
T ss_dssp HHTTSS
T ss_pred HHhCcc
Confidence 766543
No 88
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=96.19 E-value=0.01 Score=64.04 Aligned_cols=81 Identities=12% Similarity=0.068 Sum_probs=58.2
Q ss_pred eHHHHHHHH-HHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhhccCCcCCCCChhhHHHHHHHHHH
Q psy8852 413 DMKQFFTIT-QHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLLTSIDPDKAVVFGAAIQA 491 (634)
Q Consensus 413 tr~~~e~~~-~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a 491 (634)
++.++-..+ +.+.-.+...+ +.|++.+. .++.|.++||+++++.+.+.+.+.+|.++..+.. .++.|.|||+.|
T Consensus 371 ~~~~l~rAvlEgia~~~~~~~-~~l~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~-~e~~alGaA~lA 445 (508)
T 3ifr_A 371 TRGHLWRALLEAVALAFRHHV-AVLDDIGH---APQRFFASDGGTRSRVWMGIMADVLQRPVQLLAN-PLGSAVGAAWVA 445 (508)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH-HHHHHHTC---CCCEEEEESGGGGCHHHHHHHHHHHTSCEEEEEC-CSTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHH-HHHHhcCC---CCCEEEEeCCcccCHHHHHHHHHHhCCeEEecCC-CCchHHHHHHHH
Confidence 666665433 33333333333 33444454 4789999999999999999999999999876544 468899999999
Q ss_pred hHhcCCC
Q psy8852 492 NFLSGNR 498 (634)
Q Consensus 492 ~~~~~~~ 498 (634)
+.-.+..
T Consensus 446 ~~a~G~~ 452 (508)
T 3ifr_A 446 AIGGGDD 452 (508)
T ss_dssp HHHTCSS
T ss_pred HHHhCCC
Confidence 8766644
No 89
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=96.17 E-value=0.012 Score=63.52 Aligned_cols=83 Identities=17% Similarity=0.241 Sum_probs=58.8
Q ss_pred eHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhhccCCcCCCCChhhHHHHHHHHHH
Q psy8852 413 DMKQFFT-ITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLLTSIDPDKAVVFGAAIQA 491 (634)
Q Consensus 413 tr~~~e~-~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a 491 (634)
++.++-. +++.+.-.+...++..-+..+. .++.|.++||+++++.+.+.+.+.+|.++..+. +.++.|.|||+.|
T Consensus 374 ~~~~l~RAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~aks~~~~Qi~Adv~g~pV~~~~-~~e~~alGaA~la 449 (501)
T 3g25_A 374 EKEHFIRATLESLCYQTRDVMEAMSKDSGI---DVQSLRVDGGAVKNNFIMQFQADIVNTSVERPE-IQETTALGAAFLA 449 (501)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHSSC---CCSEEEEESGGGGCHHHHHHHHHHHTSEEEEES-CCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCcEEEEecchhcCHHHHHHHHHHhCCceEecC-CCcchHHHHHHHH
Confidence 5666654 3333434444444333222454 478999999999999999999999999986543 5678999999999
Q ss_pred hHhcCCCC
Q psy8852 492 NFLSGNRG 499 (634)
Q Consensus 492 ~~~~~~~~ 499 (634)
+.-.+.++
T Consensus 450 ~~a~G~~~ 457 (501)
T 3g25_A 450 GLAVGFWE 457 (501)
T ss_dssp HHHTTSSS
T ss_pred HHHhCccC
Confidence 87666543
No 90
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=96.05 E-value=0.015 Score=62.73 Aligned_cols=84 Identities=14% Similarity=0.169 Sum_probs=59.1
Q ss_pred EeHHHHHHH-HHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhhccCCcCCCCChhhHHHHHHHHH
Q psy8852 412 IDMKQFFTI-TQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLLTSIDPDKAVVFGAAIQ 490 (634)
Q Consensus 412 itr~~~e~~-~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~ 490 (634)
-++.++-.. ++.+.-.+...++..-+..+. .++.|.++||+++++.+.+.+.+.+|.++..+ .+.++.|.|||+.
T Consensus 372 ~~~~~l~RAvlEgia~~~r~~~~~l~~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~l 447 (506)
T 3h3n_X 372 TTKEDFVRATLQAVAYQSKDVIDTMKKDSGI---DIPLLKVDGGAAKNDLLMQFQADILDIDVQRA-ANLETTALGAAYL 447 (506)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCS---CCCEEEEESGGGGCHHHHHHHHHHHTSEEEEC-SSSCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCCEEEEecccccCHHHHHHHHHHhCCeEEec-CCCcchhHHHHHH
Confidence 356666543 333434444444332222454 47899999999999999999999999998653 4567999999999
Q ss_pred HhHhcCCCC
Q psy8852 491 ANFLSGNRG 499 (634)
Q Consensus 491 a~~~~~~~~ 499 (634)
|+.-.+.++
T Consensus 448 A~~a~G~~~ 456 (506)
T 3h3n_X 448 AGLAVGFWK 456 (506)
T ss_dssp HHHHTTSSC
T ss_pred HHHHhCccC
Confidence 987666543
No 91
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=96.00 E-value=1.4 Score=43.55 Aligned_cols=48 Identities=23% Similarity=0.331 Sum_probs=35.4
Q ss_pred CCCeEEEEcCCcCcHHHHHHHHhhccC-CcCCCCChhhHHHHHHHHHHhH
Q psy8852 445 DINNVILVGGSTRMKHIHEGVSNFFKT-TLLTSIDPDKAVVFGAAIQANF 493 (634)
Q Consensus 445 ~i~~ViLvGG~s~~p~v~~~l~~~f~~-~~~~~~~p~~ava~GAa~~a~~ 493 (634)
+++.|+|.||.+..+.+.+.+++.+.. ++..+. ...+.+.||+.++..
T Consensus 239 ~p~~IvlgGgv~~~~~~~~~l~~~~~~~~i~~~~-~~~~~~~GAa~la~~ 287 (299)
T 2e2o_A 239 GTNKVYLKGGMFRSNIYHKFFTLYLEKEGIISDL-GKRSPEIGAVILAYK 287 (299)
T ss_dssp TCSEEEEESGGGGSHHHHHHHHHHHHHTTCEEEC-CSCCHHHHHHHHHHH
T ss_pred CCCEEEEECCccCcHHHHHHHHHHCCCCeEeccC-CCCChHHHHHHHHHH
Confidence 456899999988778888888877753 343344 557789999988754
No 92
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=95.97 E-value=0.015 Score=62.83 Aligned_cols=82 Identities=13% Similarity=0.163 Sum_probs=57.8
Q ss_pred eHHHHHHH-HHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhhccCCcCCCCChhhHHHHHHHHHH
Q psy8852 413 DMKQFFTI-TQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLLTSIDPDKAVVFGAAIQA 491 (634)
Q Consensus 413 tr~~~e~~-~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a 491 (634)
++.++-.. ++.+.-.+...++..-+..+. .++.|.++||+++++.+.+.+.+.+|.++..+. +.++.|.|||+.|
T Consensus 371 ~~~~l~RAvlEgia~~~r~~~~~l~~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~-~~e~~alGaA~lA 446 (510)
T 2p3r_A 371 NANHIIRATLESIAYQTRDVLEAMQADSGI---RLHALRVDGGAVANNFLMQFQSDILGTRVERPE-VREVTALGAAYLA 446 (510)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CCSEEEEESGGGGCHHHHHHHHHHHTSEEEEES-CCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CccEEEEeCchhcCHHHHHHHHHHhCCceEecC-CCCcHHHHHHHHH
Confidence 56666543 333434444444332222344 478999999999999999999999999986543 5678999999999
Q ss_pred hHhcCCC
Q psy8852 492 NFLSGNR 498 (634)
Q Consensus 492 ~~~~~~~ 498 (634)
+.-.+.+
T Consensus 447 ~~a~G~~ 453 (510)
T 2p3r_A 447 GLAVGFW 453 (510)
T ss_dssp HHHHTSS
T ss_pred HHHhCcc
Confidence 8766654
No 93
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=95.91 E-value=0.012 Score=64.63 Aligned_cols=79 Identities=11% Similarity=0.215 Sum_probs=57.0
Q ss_pred eHHHHHHHH-HHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCc-CcHHHHHHHHhhccCCcCCCCChhhHHHHHHHHH
Q psy8852 413 DMKQFFTIT-QHLVNRTILLSSKALMDANLTIKDINNVILVGGST-RMKHIHEGVSNFFKTTLLTSIDPDKAVVFGAAIQ 490 (634)
Q Consensus 413 tr~~~e~~~-~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s-~~p~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~ 490 (634)
++.+|-..+ +.+.-.+...+ +.|++.+. .++.|.++||++ +++.+.+.+.+.||.++..+. +.++.|.|||+.
T Consensus 410 t~~~l~RAvlEgia~~~r~~~-~~l~~~g~---~~~~i~~~GGga~ks~~~~Qi~ADv~g~pV~~~~-~~e~~alGaA~l 484 (572)
T 3jvp_A 410 KPEEIYRALLEATAFGTRAIV-DAFHGRGV---EVHELYACGGLPQKNHLLMQIFADVTNREIKVAA-SKQTPALGAAMF 484 (572)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH-HHHHTTTC---CEEEEEEESSHHHHCHHHHHHHHHHHTSCEEEBC-CSSHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHH-HHHHHcCC---CcCEEEEEcCchhhCHHHHHHHHHHHCCeeEecC-CCccHHHHHHHH
Confidence 666665433 33333333333 34444443 478999999999 999999999999999986543 568999999999
Q ss_pred HhHhcC
Q psy8852 491 ANFLSG 496 (634)
Q Consensus 491 a~~~~~ 496 (634)
|+.-.+
T Consensus 485 A~~a~G 490 (572)
T 3jvp_A 485 ASVAAG 490 (572)
T ss_dssp HHHHHC
T ss_pred HHHhcC
Confidence 987665
No 94
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=95.85 E-value=0.1 Score=52.97 Aligned_cols=77 Identities=17% Similarity=0.253 Sum_probs=48.3
Q ss_pred HHHHHHHHHcCCceeeeecchhHHHHHh-hhcc--Cc--cceEEEEEEeCCCeEEEEEEEE--eC--CeEEEEEEcCCCC
Q psy8852 278 QFTKNAAKLAGLNVLRLLNEPTSAAIAY-KLDK--NI--FEGIFAVYDLGGGTFDISILKF--KN--GVFKVLSVGGDSN 348 (634)
Q Consensus 278 ~~l~~aa~~aGl~~~~li~Ep~AAa~~y-~~~~--~~--~~~~vlV~D~GggT~dvsv~~~--~~--~~~~v~~~~~~~~ 348 (634)
+.+..+-+..|++. .+|+-.+-|.+.| +... .. .....+|+|+|||+|++++++- .. +.+ . .....+
T Consensus 106 ~fl~~v~~~tGi~i-eVIsG~eEA~l~~~gv~~~~~~~~~~~~~lviDIGGGStel~~~~~~~~~~~~~~--~-~~~Slp 181 (343)
T 3cer_A 106 EFEDEIERILGVRP-EVIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGGSTELVIGGDGVSAPTTQV--Q-GAFSMN 181 (343)
T ss_dssp HHHHHHHHHHSSCC-EECCHHHHHHHHHHHHHSSCCTTTCCSSEEEEEECSSCEEEEECCCSSSSCTTSC--S-EEEEES
T ss_pred HHHHHHHHHHCCCE-EEeCHHHHHHHHHHHHHhhCccccccCCEEEEEeCCCceEEEEeecCccCccccc--c-eeEEEe
Confidence 45666666679976 5565555555544 3322 11 2356899999999999998754 22 111 1 122368
Q ss_pred ccchhHHHHH
Q psy8852 349 LGGDDFDYCL 358 (634)
Q Consensus 349 lGG~~id~~l 358 (634)
+|+..+.+.+
T Consensus 182 lG~v~lt~~~ 191 (343)
T 3cer_A 182 IGSVRMTERH 191 (343)
T ss_dssp CCHHHHHHHT
T ss_pred hhHHHHHHHh
Confidence 9999888876
No 95
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=95.79 E-value=0.82 Score=44.99 Aligned_cols=49 Identities=16% Similarity=0.177 Sum_probs=32.3
Q ss_pred CCCeEEEEcCCcCcHHHHHHHHhhcc------------CCcCCCCChhhHHHHHHHHHHhH
Q psy8852 445 DINNVILVGGSTRMKHIHEGVSNFFK------------TTLLTSIDPDKAVVFGAAIQANF 493 (634)
Q Consensus 445 ~i~~ViLvGG~s~~p~v~~~l~~~f~------------~~~~~~~~p~~ava~GAa~~a~~ 493 (634)
+++.|+|.||.+..+.+.+.+++.+. .++..+.....+.+.||+.++..
T Consensus 227 ~p~~IvlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~~~~~ 287 (292)
T 2gup_A 227 DPGVISLGGSISQNPDFIQGVKKAVEDFVDAYEEYTVAPVIQACTYHADANLYGALVNWLQ 287 (292)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHHHHHHHHCTTCCSCCCEEECSCSTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCccccchHHHHHHHHHHHHhhcccccccCCCeEEEcccCChhhHHHHHHHHHH
Confidence 35689999998877777666665541 11222334457889999988754
No 96
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=95.77 E-value=0.045 Score=54.97 Aligned_cols=77 Identities=16% Similarity=0.201 Sum_probs=48.1
Q ss_pred HHHHHHHHHHcCCceeeeecchhHHHHHhhhcc--CccceEEEEEEeCCCeEEEEEEEEeCCeEEEEEEcCCCCccchhH
Q psy8852 277 RQFTKNAAKLAGLNVLRLLNEPTSAAIAYKLDK--NIFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDF 354 (634)
Q Consensus 277 r~~l~~aa~~aGl~~~~li~Ep~AAa~~y~~~~--~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~i 354 (634)
...+..+-+..|++.-.+-.|-+|...+.+... .......+|+|+|||+|.+++.+ ++.+ .. ..+.++|...+
T Consensus 92 ~~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~--~~~~--~~-~~Sl~lG~vrl 166 (315)
T 3mdq_A 92 QVLIDRIKKEVNIDVEVIDGAREAELIFRGVQQAVPMEDHISLAMDIGGGSVEFIIGN--KNEI--LW-KQSFEIGGQRL 166 (315)
T ss_dssp HHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHSCCTTCCEEEEEECSSCEEEEEEC--SSCE--EE-EEEESCCHHHH
T ss_pred HHHHHHHHHHHCCCeEEeCHHHHHHHHHHHHHhcCCCCCCCEEEEEeCCCceEEEEEE--CCeE--ee-eEEEechhhHH
Confidence 345666666789987544455555444444322 21245789999999999999886 3322 21 22367888877
Q ss_pred HHHH
Q psy8852 355 DYCL 358 (634)
Q Consensus 355 d~~l 358 (634)
.+.+
T Consensus 167 ~e~f 170 (315)
T 3mdq_A 167 IDRF 170 (315)
T ss_dssp HHHS
T ss_pred HHHh
Confidence 6654
No 97
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=95.73 E-value=0.02 Score=61.94 Aligned_cols=85 Identities=12% Similarity=0.050 Sum_probs=56.5
Q ss_pred EeHHHHHHH-HHHHHHHHHHHHHHHHHHcCC-CcCCCCeEEEEcCCcCcHHHHHHHHhhccCCcCCCCChhhHHHHHHHH
Q psy8852 412 IDMKQFFTI-TQHLVNRTILLSSKALMDANL-TIKDINNVILVGGSTRMKHIHEGVSNFFKTTLLTSIDPDKAVVFGAAI 489 (634)
Q Consensus 412 itr~~~e~~-~~~~~~~~~~~i~~~l~~~~~-~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~ava~GAa~ 489 (634)
-+|.++-.. ++.+.-.+...++. |++.+. .. .++.|.++||+++++.+.+.+.+.+|.++..+. +.++.|+|||+
T Consensus 392 ~~~~~l~RAvlEgia~~~r~~l~~-l~~~~~~~g-~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~~-~~e~~alGAA~ 468 (520)
T 4e1j_A 392 TGPAEFARAALEAVCYQTRDLLEA-MHKDWRRNG-NDTVLRVDGGMVASDWTMQRLSDLLDAPVDRPV-ILETTALGVAW 468 (520)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHH-HHHHCC------CCEEEESGGGGCHHHHHHHHHHHTSCEEEES-CCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHH-HHHhhccCC-CcceEEEeCccccCHHHHHHHHHHhCCeEEecC-CCccHHHHHHH
Confidence 356666533 33333333333333 333200 01 478899999999999999999999999987643 46789999999
Q ss_pred HHhHhcCCCC
Q psy8852 490 QANFLSGNRG 499 (634)
Q Consensus 490 ~a~~~~~~~~ 499 (634)
.|+.-.+.++
T Consensus 469 lA~~a~G~~~ 478 (520)
T 4e1j_A 469 LAGSRAGVWP 478 (520)
T ss_dssp HHHHHHTSSC
T ss_pred HHHHHcCCcC
Confidence 9987766543
No 98
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=95.65 E-value=0.029 Score=60.53 Aligned_cols=82 Identities=11% Similarity=0.130 Sum_probs=58.6
Q ss_pred eHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhhccCCcCCCCChhhHHHHHHHHHH
Q psy8852 413 DMKQFFT-ITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLLTSIDPDKAVVFGAAIQA 491 (634)
Q Consensus 413 tr~~~e~-~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a 491 (634)
++.++-. +++.+.-.+...++..-+..+. .++.|.++||+++++.+.+.+.+.+|.++..+ .+.++.|.|||+.|
T Consensus 373 ~~~~l~rAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~-~~~e~~alGaA~lA 448 (504)
T 2d4w_A 373 NRNHIARAALEATAFQSREVVDAMNADSGV---DLTELRVDGGMVANELLMQFQADQLGVDVVRP-KVAETTALGAAYAA 448 (504)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHSC---CCCEEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CcceEEEeCCcccCHHHHHHHHHHhCCeEEeC-CCCcchHHHHHHHH
Confidence 5666654 4444444444444443233443 36899999999999999999999999998754 34578999999999
Q ss_pred hHhcCCC
Q psy8852 492 NFLSGNR 498 (634)
Q Consensus 492 ~~~~~~~ 498 (634)
+.-.+..
T Consensus 449 ~~~~G~~ 455 (504)
T 2d4w_A 449 GIAVGFW 455 (504)
T ss_dssp HHHHTSS
T ss_pred HhhcCcc
Confidence 8766543
No 99
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=95.63 E-value=0.023 Score=61.16 Aligned_cols=80 Identities=10% Similarity=0.089 Sum_probs=55.9
Q ss_pred eHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhhccCCcCCCCChhhHHHHHHHHHH
Q psy8852 413 DMKQFFT-ITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLLTSIDPDKAVVFGAAIQA 491 (634)
Q Consensus 413 tr~~~e~-~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a 491 (634)
++.++-. +++.+.-.+...++..-+..+. .++.|.++||+++++.+.+.+.+.+|.++..+. +.++.|.|||+.|
T Consensus 368 ~~~~~~rAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~a~n~~~~q~~Adv~g~pV~~~~-~~e~~alGaA~la 443 (495)
T 2dpn_A 368 SRAHLARAALEGVAFQVRDVVLAMEEEAGV---RLKVLKADGGMAQNRLFLKIQADLLGVPVAVPE-VTETTALGAALMA 443 (495)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHTTTSC---CCCCEEEESGGGGCHHHHHHHHHHHTSCEEEES-CSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCcEEEEecccccCHHHHHHHHHHhCCeeEecC-CcccHHHHHHHHH
Confidence 5666543 4444444444444432222343 467899999999999999999999999987644 4568999999998
Q ss_pred hHhcC
Q psy8852 492 NFLSG 496 (634)
Q Consensus 492 ~~~~~ 496 (634)
+.-.+
T Consensus 444 ~~a~G 448 (495)
T 2dpn_A 444 GVGAG 448 (495)
T ss_dssp HHHHT
T ss_pred HhhcC
Confidence 76544
No 100
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=95.61 E-value=0.63 Score=47.90 Aligned_cols=42 Identities=21% Similarity=0.231 Sum_probs=27.7
Q ss_pred cCCceeeeecchhHHHHHhhhccCccceEEEEEEeCCCeEEEEEE
Q psy8852 287 AGLNVLRLLNEPTSAAIAYKLDKNIFEGIFAVYDLGGGTFDISIL 331 (634)
Q Consensus 287 aGl~~~~li~Ep~AAa~~y~~~~~~~~~~vlV~D~GggT~dvsv~ 331 (634)
.|++ +.+.++..|||++........ .+++++-+|.| .-..++
T Consensus 188 ~~~p-V~v~NDanaaalaE~~~g~~~-~~~v~l~~GtG-iG~giv 229 (380)
T 2hoe_A 188 YGIE-VWVENDADMGAVGEKWYTKRD-DSFAWILTGKG-IGAGII 229 (380)
T ss_dssp HCSE-EEEEEHHHHHHHHHHHHTTCC-SCEEEEEESSS-CEEEEE
T ss_pred hCCC-EEEechHHHHHHHHHHhCCCC-CcEEEEEeCCc-eEEEEE
Confidence 4765 689999999999754332213 66788888887 334443
No 101
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=95.60 E-value=0.48 Score=50.85 Aligned_cols=172 Identities=14% Similarity=0.162 Sum_probs=92.2
Q ss_pred HHHHHHHHHcCCceeeeecchhHHHHHh-hhccCc-cceEEEEEEeCCCeEEEEEEEEeCCeEEEEEEcCCCCccchhHH
Q psy8852 278 QFTKNAAKLAGLNVLRLLNEPTSAAIAY-KLDKNI-FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDFD 355 (634)
Q Consensus 278 ~~l~~aa~~aGl~~~~li~Ep~AAa~~y-~~~~~~-~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~id 355 (634)
..+..+-+..|++. .+|+-.+-|.+.| +..... ..+..+|+|+|||+|.+++.+ ++.+. . ....++|...+.
T Consensus 100 ~fl~~i~~~tG~~i-~vIsG~eEA~l~~~gv~~~~~~~~~~lviDIGGGStEl~~~~--~~~~~--~-~~Sl~lG~vrlt 173 (513)
T 1u6z_A 100 DFLKRAEKVIPYPI-EIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGE--NFEPI--L-VESRRMGCVSFA 173 (513)
T ss_dssp HHHHHHTTTCSSCE-EECCHHHHHHHHHHHHHHHSCCCSCEEEEEECSSCEEEEEEE--TTEEE--E-EEEESCCHHHHH
T ss_pred HHHHHHHHHHCCCE-EEeCHHHHHHHHHHHHHhhccCCCCEEEEEECCCcEEEEEEe--CCeee--E-EEEEeccHHHHH
Confidence 44555555679877 4555555555544 332221 222689999999999999863 44332 1 223789998887
Q ss_pred HHHHHHHHHHHhhccCCHHHHHHHHHHHHHH----HHHhcC-CcceEEEEE--------e--cCCceeEEEEeHHHHHHH
Q psy8852 356 YCLFSWIVKNAFLKKLSYKDVNILMIKSREI----KELLSY-QSSVKLNVK--------L--SDKKIVNITIDMKQFFTI 420 (634)
Q Consensus 356 ~~l~~~l~~~~~~~~~~~~~~~~L~~~~e~~----K~~Ls~-~~~~~i~i~--------~--~~g~~~~~~itr~~~e~~ 420 (634)
+.+.. ....++....++...+.+. ...+.. ....-+-+- + ..+.+.. .+++++|+++
T Consensus 174 e~f~~-------~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~lvg~gGt~~~la~i~~~~~~~~~-~i~~~~l~~~ 245 (513)
T 1u6z_A 174 QLYFP-------GGVINKENFQRARMAAAQKLETLTWQFRIQGWNVAMGASGTIKAAHEVLMEMGEKDG-IITPERLEKL 245 (513)
T ss_dssp HHHSG-------GGBCCHHHHHHHHHHHHHHHTTTHHHHHHHCCSEEEEESHHHHHHHHHHHHTTCSSS-CBCHHHHHHH
T ss_pred HHHcc-------cCCCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEChHHHHHHHHHHhCCCCCC-eecHHHHHHH
Confidence 77632 1112333333222211111 000100 000111110 0 0011111 6999999999
Q ss_pred HHHHHH---------------------HHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhh
Q psy8852 421 TQHLVN---------------------RTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNF 468 (634)
Q Consensus 421 ~~~~~~---------------------~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~ 468 (634)
++.+.. .-...+...++..+ ++.|.+.+++=|=-.+.+.+.+.
T Consensus 246 ~~~l~~~~~~~r~~~~gl~~~Rad~i~~g~~Il~~i~~~~~-----~~~i~vs~~glreGll~~~~~~~ 309 (513)
T 1u6z_A 246 VKEVLRHRNFASLSLPGLSEERKTVFVPGLAILCGVFDALA-----IRELRLSDGALREGVLYEMEGRF 309 (513)
T ss_dssp HHHHTTCSBGGGCCCTTCCTTGGGTHHHHHHHHHHHHHHHT-----CSCBEECSCCHHHHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHcC-----CCEEEECCCcHHHHHHHHHHHhc
Confidence 885432 23455666666654 56899999988877777777553
No 102
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=95.56 E-value=0.031 Score=60.22 Aligned_cols=82 Identities=15% Similarity=0.137 Sum_probs=57.6
Q ss_pred eHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCcCCC-CeEEEEcCCcCcHHHHHHHHhhccCCcCCCCChhhHHHHHHHHH
Q psy8852 413 DMKQFFT-ITQHLVNRTILLSSKALMDANLTIKDI-NNVILVGGSTRMKHIHEGVSNFFKTTLLTSIDPDKAVVFGAAIQ 490 (634)
Q Consensus 413 tr~~~e~-~~~~~~~~~~~~i~~~l~~~~~~~~~i-~~ViLvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~ 490 (634)
++.++-. +++.+.-.+...++..-+..+. .+ +.|.++||+++++.+.+.+.+.+|.++..+. +.++.|.|||+.
T Consensus 376 ~~~~l~rAvlEgia~~~~~~~~~l~~~~g~---~~~~~i~~~GG~a~s~~~~Q~~Adv~g~pV~~~~-~~e~~alGaA~l 451 (503)
T 2w40_A 376 ERSHIVRALLEGIAFQLNEIVDSLTSDMGI---EMLHVLRCDGGMTKNKPFMQFNSDIINTKIEVSK-YKEVTSLGAAVL 451 (503)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---SCCSCEEEESGGGGCHHHHHHHHHHHTSCEEEES-CSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CccceEEEeCccccCHHHHHHHHHHHCCeEEecC-CCcchHHHHHHH
Confidence 5666553 4444444444444433222343 36 7899999999999999999999999987544 456899999999
Q ss_pred HhHhcCCC
Q psy8852 491 ANFLSGNR 498 (634)
Q Consensus 491 a~~~~~~~ 498 (634)
|+.-.+.+
T Consensus 452 a~~~~G~~ 459 (503)
T 2w40_A 452 AGLEVKIW 459 (503)
T ss_dssp HHHHTTCS
T ss_pred HHHHhCcc
Confidence 98765543
No 103
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=95.53 E-value=1.1 Score=44.45 Aligned_cols=48 Identities=25% Similarity=0.293 Sum_probs=31.1
Q ss_pred CCCeEEEEcCCc-Cc-HHHHHHHHhhccC--------CcCCCCChhhHHHHHHHHHHh
Q psy8852 445 DINNVILVGGST-RM-KHIHEGVSNFFKT--------TLLTSIDPDKAVVFGAAIQAN 492 (634)
Q Consensus 445 ~i~~ViLvGG~s-~~-p~v~~~l~~~f~~--------~~~~~~~p~~ava~GAa~~a~ 492 (634)
+++.|+|-||.+ .. +.+.+.+++.+.. ++..+.-...+.++|||.++.
T Consensus 237 ~p~~ivlgG~i~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~~ 294 (302)
T 3vov_A 237 DPGVVVLGGGVALNAPEGYWEALLEAYRRYLQGWEAPPLRRARLGAEAGLLGAALTAY 294 (302)
T ss_dssp CCSEEEEESHHHHTSCHHHHHHHHHHHHHTTTTSCCCCEEECSSGGGHHHHHHHHHHH
T ss_pred CCCEEEEeChhHhhhhHHHHHHHHHHHHHhcchhcCCcEEEcCCCCcHHHHHHHHHHH
Confidence 357899988877 54 5566555554421 122344456799999998875
No 104
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=95.48 E-value=0.033 Score=59.85 Aligned_cols=77 Identities=12% Similarity=0.079 Sum_probs=54.0
Q ss_pred EEeHHHHHH-HHHHHHHHHHHHHHHHHHH-cCCCcCCCCeEEEEcCCcCcHHHHHHHHhhccCCcCCCCChhhHHHHHHH
Q psy8852 411 TIDMKQFFT-ITQHLVNRTILLSSKALMD-ANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLLTSIDPDKAVVFGAA 488 (634)
Q Consensus 411 ~itr~~~e~-~~~~~~~~~~~~i~~~l~~-~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~ava~GAa 488 (634)
.-+|.++-+ +++.+.-.+...++. |++ .+. .++.|.++||+++++.+.+.+.+.+|.++.... .++.|.||+
T Consensus 361 ~~t~~~l~RAvlEgia~~~r~~~~~-l~~~~g~---~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~~--~e~~alGaa 434 (489)
T 2uyt_A 361 PESDAELARCIFDSLALLYADVLHE-LAQLRGE---DFSQLHIVGGGCQNTLLNQLCADACGIRVIAGP--VEASTLGNI 434 (489)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHH-HHHHHTC---CCSEEEEESGGGGCHHHHHHHHHHHTSEEEECC--TTHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHH-HHHHhCC---CCCEEEEeCChhhhHHHHHHHHHHHCCeeecCC--ccHhHHHHH
Confidence 446776654 334444444444433 333 343 378999999999999999999999999987543 588999997
Q ss_pred HHHhH
Q psy8852 489 IQANF 493 (634)
Q Consensus 489 ~~a~~ 493 (634)
+.|..
T Consensus 435 ~~A~~ 439 (489)
T 2uyt_A 435 GIQLM 439 (489)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66654
No 105
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=95.46 E-value=1.5 Score=43.95 Aligned_cols=43 Identities=19% Similarity=0.153 Sum_probs=28.2
Q ss_pred cCCceeeeecchhHHHHHhhhcc-CccceEEEEEEeCCCeEEEEEE
Q psy8852 287 AGLNVLRLLNEPTSAAIAYKLDK-NIFEGIFAVYDLGGGTFDISIL 331 (634)
Q Consensus 287 aGl~~~~li~Ep~AAa~~y~~~~-~~~~~~vlV~D~GggT~dvsv~ 331 (634)
.|++ +.+.++..|||++..... .....+++++-+|.| .-.+++
T Consensus 120 ~~~p-v~v~NDa~aaalgE~~~g~~~~~~~~v~l~~GtG-iG~giv 163 (327)
T 2ap1_A 120 LDRD-VRLDNDANCFALSEAWDDEFTQYPLVMGLILGTG-VGGGLV 163 (327)
T ss_dssp HTSC-EEEEEHHHHHHHHHHTSTTGGGCSEEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEecHHHHHHHHHHHhCcCCCCCcEEEEEECCc-EEEEEE
Confidence 4665 689999999998743322 123467788888887 334443
No 106
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=95.33 E-value=2.1 Score=42.15 Aligned_cols=50 Identities=16% Similarity=0.212 Sum_probs=35.9
Q ss_pred CCCeEEEEcCCcCcHHHHHHHHhhccC------CcCCCCChhhHHHHHHHHHHhHh
Q psy8852 445 DINNVILVGGSTRMKHIHEGVSNFFKT------TLLTSIDPDKAVVFGAAIQANFL 494 (634)
Q Consensus 445 ~i~~ViLvGG~s~~p~v~~~l~~~f~~------~~~~~~~p~~ava~GAa~~a~~~ 494 (634)
+++.|+|-||.+..+.+.+.|++.+.. ++..+.....+.+.||+.++...
T Consensus 237 ~p~~IvlgGgi~~~~~~~~~l~~~l~~~~~~~~~i~~s~lg~~a~~~GAa~l~~~~ 292 (297)
T 4htl_A 237 DPTHIFIGGGITSRPTFIAELKHHMESFGLRDTIIETATHKNQAGLLGAVYHFLQE 292 (297)
T ss_dssp CCSEEEEESGGGGSTTHHHHHHHHHTTTCCTTCEEEECSCTTTHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcccccHHHHHHHHHHHHHhccCCCeEEECCcCChHHHHhHHHHHHHH
Confidence 367899999999888777777776632 12234455678999999887643
No 107
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=95.27 E-value=1 Score=45.33 Aligned_cols=68 Identities=15% Similarity=0.211 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhhc---cCCcCCCC---ChhhHHHHHHHHHHhHhcC
Q psy8852 424 LVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFF---KTTLLTSI---DPDKAVVFGAAIQANFLSG 496 (634)
Q Consensus 424 ~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f---~~~~~~~~---~p~~ava~GAa~~a~~~~~ 496 (634)
+.+.+.+.+.++++..+ ++.|+|+||.+....+++.|.+.+ |.+++.+. -.|.+++.|++.+.....+
T Consensus 233 l~~~l~~~~~~a~~~~g-----~~~vvlsGGVa~N~~L~~~L~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~g 306 (334)
T 3eno_A 233 AFAMLVEVLERALYVSG-----KDEILMAGGVALNRRLRDMVTNMAREAGIRSYLTDREYCMDNGIMIAQAALLMYKSG 306 (334)
T ss_dssp HHHHHHHHHHHHHHHHT-----CSEEEEESSGGGCHHHHHHHHHHHHHHTSEEECCCTTTTSCCTHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcC-----CCeEEEcCCHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChHHHHHHHHHHHHHHcC
Confidence 44455566666666654 568999999999999999999887 55555433 2467889999877655444
No 108
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=95.04 E-value=1.2 Score=46.10 Aligned_cols=43 Identities=7% Similarity=0.005 Sum_probs=28.0
Q ss_pred cCCceeeeecchhHHHHHhhhcc-CccceEEEEEEeCCCeEEEEEE
Q psy8852 287 AGLNVLRLLNEPTSAAIAYKLDK-NIFEGIFAVYDLGGGTFDISIL 331 (634)
Q Consensus 287 aGl~~~~li~Ep~AAa~~y~~~~-~~~~~~vlV~D~GggT~dvsv~ 331 (634)
.|++ +.+.++..|||++..... .....+++++-+|.| .-..++
T Consensus 186 ~~~p-v~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~giv 229 (406)
T 1z6r_A 186 TGVP-VYIQHDISAWTMAEALFGASRGARDVIQVVIDHN-VGAGVI 229 (406)
T ss_dssp HSSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechhHHHHHHHHHhcCCCCCCcEEEEEECCc-EEEEEE
Confidence 4776 678999999998754322 223456778888887 444444
No 109
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=94.53 E-value=0.23 Score=53.32 Aligned_cols=76 Identities=22% Similarity=0.317 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHcCCceeeeecchhHHHH-HhhhccCccceEEEEEEeCCCeEEEEEEEEeCCeEEEEEEcCCCCccchhH
Q psy8852 276 QRQFTKNAAKLAGLNVLRLLNEPTSAAI-AYKLDKNIFEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNLGGDDF 354 (634)
Q Consensus 276 qr~~l~~aa~~aGl~~~~li~Ep~AAa~-~y~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~i 354 (634)
....+..+-+..|++. .+|+-.+-|.+ +.+....-.....+|+|+|||+|.+++.+ ++.+. ...+.++|.-.+
T Consensus 102 ~~~fl~~i~~~tG~~i-evIsG~EEA~l~~~gv~~~~~~~~~lvvDIGGGStEl~~~~--~~~~~---~~~Sl~lG~vrl 175 (508)
T 3hi0_A 102 GPDFIREAEAILGCEI-EVLSGEKEALYSAYGVISGFYQPDGIAGDLGGGSLELIDIK--DKSCG---EGITLPLGGLRL 175 (508)
T ss_dssp HHHHHHHHHHHHTSCE-EECCHHHHHHHHHHHHHHHSSSCEEEEEEECSSCEEEEEEE--TTEEC---CCEEESCCHHHH
T ss_pred HHHHHHHHHHHHCCCe-EEecHHHHHHHHHHHHHhcCCCCCeEEEEeCCCceEEEEee--CCeee---eEEEecceEEeh
Confidence 3455666666789987 45555544444 44433321223459999999999999876 33321 122467888777
Q ss_pred HHH
Q psy8852 355 DYC 357 (634)
Q Consensus 355 d~~ 357 (634)
.+.
T Consensus 176 ~e~ 178 (508)
T 3hi0_A 176 SEQ 178 (508)
T ss_dssp HHH
T ss_pred hhc
Confidence 653
No 110
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=94.14 E-value=3.3 Score=43.17 Aligned_cols=25 Identities=8% Similarity=0.057 Sum_probs=21.4
Q ss_pred CCCceEEEEEeCCceEEEEEEE-CCe
Q psy8852 130 KNKCVSIGIDFGTTNSLVAIVR-NNI 154 (634)
Q Consensus 130 p~~~~vvGID~GTt~s~va~~~-~g~ 154 (634)
|...+++|||+|.|++++++++ +|+
T Consensus 105 ~~~~~~lGIDiGgt~i~~~l~d~~G~ 130 (429)
T 1z05_A 105 NLGWQFLSMRLGRGYLTIALHELGGE 130 (429)
T ss_dssp CTTEEEEEEEEETTEEEEEEEETTSC
T ss_pred CCCCEEEEEEECCCEEEEEEECCCCC
Confidence 4567899999999999999988 554
No 111
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=93.81 E-value=2.3 Score=42.24 Aligned_cols=49 Identities=27% Similarity=0.355 Sum_probs=32.8
Q ss_pred CCCeEEEEcCCcCc-----HHHHHHHHhhccC-------CcCCCCChhhHHHHHHHHHHhH
Q psy8852 445 DINNVILVGGSTRM-----KHIHEGVSNFFKT-------TLLTSIDPDKAVVFGAAIQANF 493 (634)
Q Consensus 445 ~i~~ViLvGG~s~~-----p~v~~~l~~~f~~-------~~~~~~~p~~ava~GAa~~a~~ 493 (634)
+++.|+|-||.+.. +.+++.+++.+.. ++..+.-...+.++|||.++..
T Consensus 239 dP~~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~la~~ 299 (310)
T 3htv_A 239 DPDAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAHQ 299 (310)
T ss_dssp CCSEEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHHHHHH
Confidence 46789999998765 4567777766521 1122334567899999988754
No 112
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=93.01 E-value=8.1 Score=38.67 Aligned_cols=60 Identities=5% Similarity=-0.077 Sum_probs=41.2
Q ss_pred CcCcEEEEeCCCCCHHHHHHHHHHHHHc-C--CceeeeecchhHHHHHhhhccCccceEEEEEEeCCCe
Q psy8852 260 RIFGAVITVPAYFNDIQRQFTKNAAKLA-G--LNVLRLLNEPTSAAIAYKLDKNIFEGIFAVYDLGGGT 325 (634)
Q Consensus 260 ~~~~~viTVPa~~~~~qr~~l~~aa~~a-G--l~~~~li~Ep~AAa~~y~~~~~~~~~~vlV~D~GggT 325 (634)
.+..+.|++|...+......+++..+.. | .-.+.+.++..|||+++ . . ...+++=+|-|.
T Consensus 70 ~i~gigi~~pG~vd~~~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a~-~--~---~~~v~v~~GTGi 132 (347)
T 2ch5_A 70 PLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIATA-T--P---DGGVVLISGTGS 132 (347)
T ss_dssp CBSEEEEEETTTTCHHHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHHH-C--S---SCEEEEEESSSE
T ss_pred ceeEEEEeccCCCchHHHHHHHHHHHHhcCCCCceEEEECcHHHHHHhh-C--C---CCcEEEEEcCCc
Confidence 5778999999988877666666666543 4 13568999999999984 2 2 234455556664
No 113
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=92.81 E-value=8.7 Score=38.48 Aligned_cols=43 Identities=21% Similarity=0.087 Sum_probs=27.9
Q ss_pred cCCceeeeecchhHHHHHhhhcc-CccceEEEEEEeCCCeEEEEEE
Q psy8852 287 AGLNVLRLLNEPTSAAIAYKLDK-NIFEGIFAVYDLGGGTFDISIL 331 (634)
Q Consensus 287 aGl~~~~li~Ep~AAa~~y~~~~-~~~~~~vlV~D~GggT~dvsv~ 331 (634)
.|++ +.+.++..|||++..... .....+++++-+|.| .-..++
T Consensus 131 ~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~v~i~~GtG-iG~gii 174 (343)
T 2yhw_A 131 LHLP-VWVDNDGNCAALAERKFGQGKGLENFVTLITGTG-IGGGII 174 (343)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHTSTTTTCSCEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCC-EEEEEE
Confidence 3666 688999999999754322 113356778888887 444443
No 114
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=92.10 E-value=0.14 Score=54.72 Aligned_cols=72 Identities=13% Similarity=0.085 Sum_probs=52.1
Q ss_pred HHHHHHHHHH--HHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhh-ccCCcCCCCChhhHHHHHHHHHHhHh
Q psy8852 418 FTITQHLVNR--TILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNF-FKTTLLTSIDPDKAVVFGAAIQANFL 494 (634)
Q Consensus 418 e~~~~~~~~~--~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~-f~~~~~~~~~p~~ava~GAa~~a~~~ 494 (634)
..+...+++. +.-.++..++... +.+.|.++||+++++.+.+.+.+. ||.++..+.. .++.|+|||+.|+.-
T Consensus 362 ~~l~RA~lE~~Gia~~~r~~l~~~~----~~~~i~~~GG~a~s~~w~Qi~ADv~~g~pV~~~~~-~e~~alGAA~lA~~a 436 (482)
T 3h6e_A 362 DWFERRAAACLYAALVADTALDLIG----STGRILVEGRFAEADVFVRALASLRPDCAVYTANA-HNDVSFGALRLIDPG 436 (482)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHTT----CCSEEEEESGGGGCHHHHHHHHHHSTTSEEEEESS-CCCTTGGGHHHHCTT
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhc----CCCeEEEeCCcccCHHHHHHHhhhcCCCeEEEcCC-CchHHHHHHHHhCcc
Confidence 3444445543 4444455555433 136899999999999999999999 9999876544 467899999998743
No 115
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=91.15 E-value=12 Score=37.86 Aligned_cols=20 Identities=25% Similarity=0.303 Sum_probs=17.9
Q ss_pred ceEEEEEeCCceEEEEEEEC
Q psy8852 133 CVSIGIDFGTTNSLVAIVRN 152 (634)
Q Consensus 133 ~~vvGID~GTt~s~va~~~~ 152 (634)
.+++|||+|.|++.+++++.
T Consensus 29 ~~~lgiDiGgt~i~~~l~d~ 48 (373)
T 2q2r_A 29 PLTFVGDVGGTSARMGFVRE 48 (373)
T ss_dssp CEEEEEEECSSEEEEEEEEE
T ss_pred CeEEEEEEccccEEEEEEec
Confidence 57899999999999999874
No 116
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=89.98 E-value=3.5 Score=39.49 Aligned_cols=22 Identities=23% Similarity=0.362 Sum_probs=18.9
Q ss_pred ceEEEEEeCCceEEEEEEECCe
Q psy8852 133 CVSIGIDFGTTNSLVAIVRNNI 154 (634)
Q Consensus 133 ~~vvGID~GTt~s~va~~~~g~ 154 (634)
.+.++||+|+|+++.+++++++
T Consensus 3 ~M~L~IDIGNT~ik~gl~~~~~ 24 (249)
T 3bex_A 3 PMYLLVDVGNTHSVFSITEDGK 24 (249)
T ss_dssp CEEEEEEECSSEEEEEEESSSS
T ss_pred ceEEEEEECCCeEEEEEEECCE
Confidence 4679999999999999987654
No 117
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=86.92 E-value=25 Score=35.92 Aligned_cols=26 Identities=19% Similarity=0.344 Sum_probs=23.2
Q ss_pred CCCCeEEEEcCCc-CcHHHHHHHHhhc
Q psy8852 444 KDINNVILVGGST-RMKHIHEGVSNFF 469 (634)
Q Consensus 444 ~~i~~ViLvGG~s-~~p~v~~~l~~~f 469 (634)
..+|.|+++||-+ +.+.+++.+.+.+
T Consensus 329 ggvDaIVFTgGIGEns~~vR~~i~~~l 355 (415)
T 2e1z_A 329 HRLDGIIFTGGIGENSVLIRQLVIEHL 355 (415)
T ss_dssp SSCCEEEEEHHHHHHCHHHHHHHHHTT
T ss_pred CCCCEEEECccccccCHHHHHHHHhhH
Confidence 4699999999999 9999999998654
No 118
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=86.75 E-value=10 Score=39.60 Aligned_cols=43 Identities=16% Similarity=0.283 Sum_probs=28.4
Q ss_pred ceeeeecchhHHHHHhhh-----ccC--ccceEEEEEEeCCCeEEEEEEE
Q psy8852 290 NVLRLLNEPTSAAIAYKL-----DKN--IFEGIFAVYDLGGGTFDISILK 332 (634)
Q Consensus 290 ~~~~li~Ep~AAa~~y~~-----~~~--~~~~~vlV~D~GggT~dvsv~~ 332 (634)
..+++|+-.+-+.++|.. ..- .....+.++|+|||++.++...
T Consensus 150 ~~v~iisG~eEg~y~wi~vnyllg~l~~~~~~t~g~lDlGGgStQi~f~~ 199 (452)
T 3zx3_A 150 QGAKIITGQEEGAYGWITINYLLGRFKTPGGSTFGALDLGGASTQITFVP 199 (452)
T ss_dssp EEEEECCHHHHHHHHHHHHHHHTTTTC---CCCCEEEEECSSEEEEEECC
T ss_pred CceEECCchhhhhhhHHHHHhhhccccCCCCCceEEEecCCCceEEEecc
Confidence 467888877766665532 210 0235688999999999998653
No 119
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=84.05 E-value=17 Score=38.34 Aligned_cols=57 Identities=12% Similarity=0.036 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHcCCc--eeeeecchhHHHHHhhhccCccceEEEEEEeCCCeEEEEEEEE
Q psy8852 274 DIQRQFTKNAAKLAGLN--VLRLLNEPTSAAIAYKLDKNIFEGIFAVYDLGGGTFDISILKF 333 (634)
Q Consensus 274 ~~qr~~l~~aa~~aGl~--~~~li~Ep~AAa~~y~~~~~~~~~~vlV~D~GggT~dvsv~~~ 333 (634)
..-.+.+++|.+.-|++ ++.++++.+|++++..+... ..++-+=+|-|+=-+.+.+.
T Consensus 185 ~dv~~~L~~al~r~gl~v~v~aivNDtv~tll~~~y~~~---~~~iglIlGTG~N~~y~e~~ 243 (485)
T 3o8m_A 185 HDVVPMLQEQIEKLNIPINVVALINDTTGTLVASLYTDP---QTKMGIIIGTGVNGAYYDVV 243 (485)
T ss_dssp SBHHHHHHHHHHHTTCCEEEEEEECHHHHHHHHHHHHCT---TEEEEEEESSSEEEEEEEEG
T ss_pred ccHHHHHHHHHHhcCCCceEEEEEEcHHHHHHHHhhCCC---CcEEEEEEecCcceEEEeec
Confidence 45677899999888886 47899999999998776532 45555667877654444443
No 120
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=81.69 E-value=2.9 Score=47.01 Aligned_cols=63 Identities=16% Similarity=0.198 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhhc---cCCcCCCCC---hhhHHHHHHHHHHhHh
Q psy8852 427 RTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFF---KTTLLTSID---PDKAVVFGAAIQANFL 494 (634)
Q Consensus 427 ~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f---~~~~~~~~~---p~~ava~GAa~~a~~~ 494 (634)
-+.+.+..+.++.+ ++.|+|.||.+....+++.+.+.+ |.+++.+.. -|..+|.|+|++|+..
T Consensus 692 ~L~~~~~~a~~~tg-----~~~VvLSGGVa~N~~L~~~l~~~L~~~G~~v~~p~~vP~nDgGiALGQA~iA~~~ 760 (772)
T 4g9i_A 692 AFAHTAVERAREFG-----VKNVALSGGVAYNELITKMIRKVVEANGLNFHVTTEVPRGDNGVNVGQAFLGGLY 760 (772)
T ss_dssp HHHHHHHHHHHTTT-----CSCCCEESSTTCCHHHHHHHHHHGGGSSCCCCCCTTSCSSGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC-----cCEEEEEchHHHHHHHHHHHHHHHHHCCCEEEccCCCCCCcchHHHHHHHHHHHH
Confidence 34555556656544 668999999999999999999887 445554322 3788999999888653
No 121
>1g99_A Acetate kinase; alpha/beta, askha (acetate and sugar kinases, HSC70, actin) superfamily, conserved epsilon conformation; HET: ADP; 2.50A {Methanosarcina thermophila} SCOP: c.55.1.2 c.55.1.2 PDB: 1tuu_A* 1tuy_A*
Probab=81.63 E-value=25 Score=35.85 Aligned_cols=43 Identities=7% Similarity=0.047 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCc-CcHHHHHHHHhhc
Q psy8852 423 HLVNRTILLSSKALMDANLTIKDINNVILVGGST-RMKHIHEGVSNFF 469 (634)
Q Consensus 423 ~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s-~~p~v~~~l~~~f 469 (634)
-++.++.+.|-...... ..+|.|+++||-+ +.+.+++.+.+.+
T Consensus 304 ~f~yri~k~IGa~~a~L----ggvDaiVFTgGIGEns~~vR~~i~~~l 347 (408)
T 1g99_A 304 IFAYKVKKFIGEYSAVL----NGADAVVFTAGIGENSASIRKRILTGL 347 (408)
T ss_dssp HHHHHHHHHHHHHHHHT----TSCSEEEEEHHHHHHCHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHhh----CCCCEEEECccccccCHHHHHHHHhhh
Confidence 34444544444444433 3589999999999 9999999998654
No 122
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=81.01 E-value=1.1 Score=48.56 Aligned_cols=27 Identities=22% Similarity=0.226 Sum_probs=20.7
Q ss_pred ccCCCceEEEEEeCCceEEEEEEE-CCe
Q psy8852 128 SVKNKCVSIGIDFGTTNSLVAIVR-NNI 154 (634)
Q Consensus 128 ~~p~~~~vvGID~GTt~s~va~~~-~g~ 154 (634)
..|.+++++|||+|||.+++++++ +|+
T Consensus 5 ~~~~~~~~lgID~GTts~Ka~l~d~~G~ 32 (538)
T 4bc3_A 5 EHAPRRCCLGWDFSTQQVKVVAVDAELN 32 (538)
T ss_dssp ----CCEEEEEEECSSEEEEEEEETTCC
T ss_pred cCCCCCEEEEEEEcCcCEEEEEECCCCC
Confidence 345567999999999999999998 555
No 123
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=78.77 E-value=1.4 Score=47.18 Aligned_cols=25 Identities=32% Similarity=0.551 Sum_probs=20.0
Q ss_pred CCCceEEEEEeCCceEEEEEEE-CCe
Q psy8852 130 KNKCVSIGIDFGTTNSLVAIVR-NNI 154 (634)
Q Consensus 130 p~~~~vvGID~GTt~s~va~~~-~g~ 154 (634)
+++++++|||+|||++++++++ +|+
T Consensus 4 ~~~~~~lgIDiGtts~k~~l~d~~G~ 29 (508)
T 3ifr_A 4 AQGRQVIGLDIGTTSTIAILVRLPDT 29 (508)
T ss_dssp ---CEEEEEEECSSEEEEEEEETTTE
T ss_pred ccCCEEEEEEecCcceEEEEECCCCC
Confidence 3457999999999999999998 665
No 124
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=78.57 E-value=19 Score=37.63 Aligned_cols=56 Identities=13% Similarity=-0.064 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHcCCc--eeeeecchhHHHHHhhhccCccceEEEEEEeCCCeEEEEEEEE
Q psy8852 275 IQRQFTKNAAKLAGLN--VLRLLNEPTSAAIAYKLDKNIFEGIFAVYDLGGGTFDISILKF 333 (634)
Q Consensus 275 ~qr~~l~~aa~~aGl~--~~~li~Ep~AAa~~y~~~~~~~~~~vlV~D~GggT~dvsv~~~ 333 (634)
.-++.++++.+..|++ ++.++++..|++++-.+.. ..+++.+=+|-|+=-..+.+.
T Consensus 164 ~v~~~L~~~l~r~glpv~vval~NDa~~tll~e~~~~---~~~~iglilGTGvgg~~i~~~ 221 (457)
T 2yhx_A 164 KLISAMXNAXFPAGDXXXSVADIXDSHGILXXVNYTD---AXIKMGIIFGSGVNAAYWCDS 221 (457)
T ss_dssp SBHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHC---TTEEEEEEESSSEEEEEEECG
T ss_pred HHHHHHHHhHhhcCCcceeEEEEecchhhccchhhcC---CccEEEEEECcEEEEEEEECC
Confidence 5567788888666765 5899999999999876632 345666677888544444443
No 125
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=77.64 E-value=5.4 Score=43.68 Aligned_cols=65 Identities=17% Similarity=0.261 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhhc-cCCcCCC---CChhhHHHHHHHHHHhH
Q psy8852 424 LVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFF-KTTLLTS---IDPDKAVVFGAAIQANF 493 (634)
Q Consensus 424 ~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f-~~~~~~~---~~p~~ava~GAa~~a~~ 493 (634)
+++.+.+.+.++.+..+ ++.|+|+||.+....+++.|.+.+ |.+++.+ .-.|-++|.|.++.|+.
T Consensus 583 la~~L~~~~~ra~~~~g-----~~~VvLsGGV~~N~~Lre~L~~~l~g~~v~~p~~~p~~DnGiaLGQA~~a~~ 651 (657)
T 3ttc_A 583 LAQGFAALMREQATMRG-----ITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAA 651 (657)
T ss_dssp HHHHHHHHHHHHHHTTT-----CCEEEEESGGGGCHHHHHHHHHHTTTSEEECCCSSCSSGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcC-----CCEEEEECcHHHHHHHHHHHHHHhCCCEEEecCCCCCCcHHHHHHHHHHHHH
Confidence 34444555555555543 579999999999999999999988 6555432 23478899999998853
No 126
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=77.60 E-value=1.4 Score=47.48 Aligned_cols=23 Identities=26% Similarity=0.323 Sum_probs=20.4
Q ss_pred CceEEEEEeCCceEEEEEEE-CCe
Q psy8852 132 KCVSIGIDFGTTNSLVAIVR-NNI 154 (634)
Q Consensus 132 ~~~vvGID~GTt~s~va~~~-~g~ 154 (634)
.++++|||+|||.+++++++ +|+
T Consensus 3 kkYvlgID~GTss~Ka~l~d~~G~ 26 (526)
T 3ezw_A 3 KKYIVALDQGTTSSRAVVMDHDAN 26 (526)
T ss_dssp CCEEEEEEECSSEEEEEEECTTCC
T ss_pred ceEEEEEEccccceeeeEEcCCCC
Confidence 47999999999999999988 565
No 127
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=76.84 E-value=8.9 Score=38.68 Aligned_cols=69 Identities=19% Similarity=0.224 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhhcc-CCcCC----CCChhhHHHHHHHHHHhHhc
Q psy8852 424 LVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFK-TTLLT----SIDPDKAVVFGAAIQANFLS 495 (634)
Q Consensus 424 ~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~-~~~~~----~~~p~~ava~GAa~~a~~~~ 495 (634)
+..-+...|-+.++.... .++.|+++||+++.|.+.++|++.++ .++.. ..+|+.-=|..-|++|....
T Consensus 265 Lt~~TA~sIa~~~~~~~~---~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~~d~~Gi~~d~~EA~aFA~LA~~~l 338 (371)
T 3qbx_A 265 LLELSARSISESLLDAQP---DCEEVLVCGGGAFNTALMKRLAMLMPEARVASTDEYGIPPAWMEGMAFAWLAHRFL 338 (371)
T ss_dssp HHHHHHHHHHHHHHHHCT---TCCEEEEESGGGGCHHHHHHHHHHCTTSEEEEGGGGTCCTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccC---CCceEEEECCccCcHHHHHHHHHhCCCCEEeCHHHcCCChhHHHHHHHHHHHHHHH
Confidence 333334444444444321 36789999999999999999999995 33322 33455444555666665543
No 128
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=75.77 E-value=6.1 Score=44.19 Aligned_cols=65 Identities=23% Similarity=0.254 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhhc---cCCcCCC-CC--hhhHHHHHHHHHHhHhc
Q psy8852 426 NRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFF---KTTLLTS-ID--PDKAVVFGAAIQANFLS 495 (634)
Q Consensus 426 ~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f---~~~~~~~-~~--p~~ava~GAa~~a~~~~ 495 (634)
+.+.+.+.++.+..+ ++.|+|+||.+....+++.|.+.+ |.+++.+ .- .|-++|.|+|++|....
T Consensus 679 ~~L~~~~~~a~~~~g-----~~~VvLsGGVa~N~~Lr~~L~~~l~~~g~~v~~p~~~p~~DgGialGQA~~a~~~~ 749 (761)
T 3vth_A 679 NFTYDLANLIRKETG-----INKVVLSGGSFQNRYLLRRLIEKLSLSGFEVYSNSKVPCNDGGISLGQAVIANKIL 749 (761)
T ss_dssp HHHHHHHHHHHHHHC-----CCEEEEESGGGGSHHHHHHHHHHHHHTTCEEEECSSSCSSGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-----CCEEEEECcHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCchHHHHHHHHHHHHHh
Confidence 334445555555544 569999999999999999998886 4454432 12 37889999999887543
No 129
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=75.44 E-value=66 Score=31.72 Aligned_cols=47 Identities=26% Similarity=0.340 Sum_probs=31.2
Q ss_pred HHcCCceeeeecchhHHHHHhhhc---------c--CccceEEEEEEeCCCeEEEEEEE
Q psy8852 285 KLAGLNVLRLLNEPTSAAIAYKLD---------K--NIFEGIFAVYDLGGGTFDISILK 332 (634)
Q Consensus 285 ~~aGl~~~~li~Ep~AAa~~y~~~---------~--~~~~~~vlV~D~GggT~dvsv~~ 332 (634)
+..|++.+.+.++-.|+|++-... . ....++++++-+|.|- -..++.
T Consensus 99 ~~~~~p~V~v~NDanaaalgE~~~~~~~~~~~g~g~~~~~~~~~~v~~GTGi-G~giv~ 156 (332)
T 1sz2_A 99 KNLGFSHLEIINDFTAVSMAIPMLKKEHLIQFGGAEPVEGKPIAVYGAGTGL-GVAHLV 156 (332)
T ss_dssp HHHTCSEEEEEEHHHHHHHHGGGCCGGGEEECSSCCCCTTCCEEEEEESSSE-EEEEEE
T ss_pred HHhCCCcEEEEeCHhHHhccccccChhhheecCCCCCCCCCcEEEEEcCccc-eEEEEe
Confidence 345888789999999999976432 1 1134567888888873 344443
No 130
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=73.29 E-value=2.3 Score=46.03 Aligned_cols=23 Identities=22% Similarity=0.354 Sum_probs=20.3
Q ss_pred CceEEEEEeCCceEEEEEEE-CCe
Q psy8852 132 KCVSIGIDFGTTNSLVAIVR-NNI 154 (634)
Q Consensus 132 ~~~vvGID~GTt~s~va~~~-~g~ 154 (634)
+++++|||+|||++++++++ +|+
T Consensus 4 ~~~~lgIDiGtts~ka~l~d~~G~ 27 (554)
T 3l0q_A 4 ASYFIGVDVGTGSARAGVFDLQGR 27 (554)
T ss_dssp CCEEEEEEECSSEEEEEEEETTSC
T ss_pred CcEEEEEEECcccEEEEEECCCCC
Confidence 46899999999999999998 565
No 131
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=72.98 E-value=1e+02 Score=32.79 Aligned_cols=183 Identities=13% Similarity=0.116 Sum_probs=91.0
Q ss_pred CcCcEEEEe-CCCCCHHHHH--HHHHHHHHcCCceeeeecchhHHHHHhhhccCccceEEEEEEeCCCeEEEEEEEEeCC
Q psy8852 260 RIFGAVITV-PAYFNDIQRQ--FTKNAAKLAGLNVLRLLNEPTSAAIAYKLDKNIFEGIFAVYDLGGGTFDISILKFKNG 336 (634)
Q Consensus 260 ~~~~~viTV-Pa~~~~~qr~--~l~~aa~~aGl~~~~li~Ep~AAa~~y~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~ 336 (634)
.++.+++|. |..|+.-..- .-+..|...|++.+. ++.-.|=+++.....+...- +++-+.||++.+.. +.++
T Consensus 72 ~id~ia~~~gPG~~~~l~vg~~~ak~la~~~~~p~~~-v~h~~aH~~~~~~~~~~~~p--~~l~vsGg~t~~~~--~~~~ 146 (540)
T 3en9_A 72 EIDLIAFSQGPGLGPSLRVTATVARTLSLTLKKPIIG-VNHCIAHIEIGKLTTEAEDP--LTLYVSGGNTQVIA--YVSK 146 (540)
T ss_dssp GCCEEEEEEESSCHHHHHHHHHHHHHHHHHHTCCEEE-EEHHHHHHHHHHHHSSCSSC--EEEEECSSCEEEEE--EETT
T ss_pred HCcEEEEecCCCchhhHHHHHHHHHHHHHHhCCCeeE-eccHHHHHHHHHHhcCCCCC--cEEEEcCCCcEEEE--EeCC
Confidence 567777775 7665543221 122334445766544 44444444333232221222 55556677776544 4468
Q ss_pred eEEEEEEcCCCCccchhHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHhcCCcceEEEEEe-cCCceeEEE----
Q psy8852 337 VFKVLSVGGDSNLGGDDFDYCLFSWIVKNAFLKKLSYKDVNILMIKSREIKELLSYQSSVKLNVKL-SDKKIVNIT---- 411 (634)
Q Consensus 337 ~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~-~~g~~~~~~---- 411 (634)
.+++++..-+. --|+.||..- ..++....... .+...|.+.+ .. +.++. ..+.++++.
T Consensus 147 ~~~~lg~t~d~-s~G~~~D~~a-----~~lgl~~~gg~---~ie~lA~~g~------~~--~~~p~~~~~~~~sfsgl~~ 209 (540)
T 3en9_A 147 KYRVFGETLDI-AVGNCLDQFA-----RYVNLPHPGGP---YIEELARKGK------KL--VDLPYTVKGMDIAFSGLLT 209 (540)
T ss_dssp EEEEEEEBSSS-CHHHHHHHHH-----HHTTCCSSCHH---HHHHHHHTCC------CC--CCCCCCEETTEECCHHHHH
T ss_pred ceEEEeeccch-HhHHHHHHHH-----HHcCCCCCCHH---HHHHHHHcCC------cc--CcCCCCCCCcceecHHHHH
Confidence 89999887643 3356666432 23333321111 2222222111 00 11110 011122110
Q ss_pred ---------EeHHHHHHHHH-HHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhhc
Q psy8852 412 ---------IDMKQFFTITQ-HLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFF 469 (634)
Q Consensus 412 ---------itr~~~e~~~~-~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f 469 (634)
.+..++...++ .+++.+...+.++++..+ ++.|+|+||.+....+++.+.+.+
T Consensus 210 ~~~~~~~~~~~~~~ia~~fq~~~~~~l~~~~~~a~~~~~-----~~~~~~~GGVa~N~~l~~~l~~~~ 272 (540)
T 3en9_A 210 AAMRAYDAGERLEDICYSLQEYAFSMLTEITERALAHTN-----KGEVMLVGGVAANNRLREMLKAMC 272 (540)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCeEEEeCcHHhHHHHHHHHHHHH
Confidence 11223322222 234445566666666655 569999999999999999999876
No 132
>2iir_A Acetate kinase; transferase; 3.30A {Thermotoga maritima}
Probab=71.32 E-value=58 Score=33.15 Aligned_cols=43 Identities=12% Similarity=0.193 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCc-CcHHHHHHHHhhcc
Q psy8852 424 LVNRTILLSSKALMDANLTIKDINNVILVGGST-RMKHIHEGVSNFFK 470 (634)
Q Consensus 424 ~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s-~~p~v~~~l~~~f~ 470 (634)
++.++.+.|-......+ .+|.|+++||-+ +.+.+++.+.+.++
T Consensus 305 f~yri~k~IGa~~a~Lg----gvDaIVFTgGIGEns~~vR~~i~~~l~ 348 (403)
T 2iir_A 305 YDYRIAKYIGAYAAAMN----GVDAIVFTAGVGENSPITREDVCSYLE 348 (403)
T ss_dssp HHHHHHHHHHHHHHHHT----CCSEEEEEHHHHTTCHHHHHHHHHTTG
T ss_pred HHHHHHHHHHHHHHHhC----CCCEEEECcccccCCHHHHHHHHhhhh
Confidence 44444444444433332 589999999999 99999999987763
No 133
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=70.40 E-value=3 Score=44.56 Aligned_cols=23 Identities=30% Similarity=0.307 Sum_probs=20.0
Q ss_pred CceEEEEEeCCceEEEEEEE-CCe
Q psy8852 132 KCVSIGIDFGTTNSLVAIVR-NNI 154 (634)
Q Consensus 132 ~~~vvGID~GTt~s~va~~~-~g~ 154 (634)
+++++|||+|||.+++++++ +|+
T Consensus 3 m~~~lgIDiGtts~K~~l~d~~G~ 26 (504)
T 3ll3_A 3 LKYIIGMDVGTTATKGVLYDINGK 26 (504)
T ss_dssp CEEEEEEEECSSEEEEEEEETTSC
T ss_pred CCEEEEEEecCCceEEEEEcCCCC
Confidence 35899999999999999998 555
No 134
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=70.20 E-value=2.8 Score=44.82 Aligned_cols=23 Identities=26% Similarity=0.323 Sum_probs=20.1
Q ss_pred CceEEEEEeCCceEEEEEEE-CCe
Q psy8852 132 KCVSIGIDFGTTNSLVAIVR-NNI 154 (634)
Q Consensus 132 ~~~vvGID~GTt~s~va~~~-~g~ 154 (634)
+++++|||+|||++++++++ +|+
T Consensus 2 ~~~~lgIDiGtts~k~~l~d~~G~ 25 (510)
T 2p3r_A 2 KKYIVALDQGTTSSRAVVMDHDAN 25 (510)
T ss_dssp CCEEEEEEECSSEEEEEEECTTCC
T ss_pred CcEEEEEEcCCcceEEEEECCCCC
Confidence 46899999999999999998 565
No 135
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=69.31 E-value=3.4 Score=44.15 Aligned_cols=23 Identities=39% Similarity=0.380 Sum_probs=20.2
Q ss_pred CceEEEEEeCCceEEEEEEE-CCe
Q psy8852 132 KCVSIGIDFGTTNSLVAIVR-NNI 154 (634)
Q Consensus 132 ~~~vvGID~GTt~s~va~~~-~g~ 154 (634)
+++++|||+|||++++++++ +|+
T Consensus 4 ~~~~lgIDiGtts~k~~l~d~~G~ 27 (506)
T 3h3n_X 4 KNYVMAIDQGTTSSRAIIFDRNGK 27 (506)
T ss_dssp CCEEEEEEECSSEEEEEEEETTSC
T ss_pred CCEEEEEEcCCCceEEEEECCCCC
Confidence 36899999999999999998 665
No 136
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=68.14 E-value=16 Score=36.75 Aligned_cols=72 Identities=15% Similarity=0.180 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhhccC-CcCC----CCChhhHHHHHHHHHHhH
Q psy8852 419 TITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKT-TLLT----SIDPDKAVVFGAAIQANF 493 (634)
Q Consensus 419 ~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~-~~~~----~~~p~~ava~GAa~~a~~ 493 (634)
.+..-+..-+...|-+.++... ..+.|+++||+++.|.+.++|++.++. ++.. ..+|+.-=|..-|++|..
T Consensus 267 Dv~ATLt~~TA~sIa~~~~~~~----~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~t~~~Gi~~d~~EA~aFA~LA~~ 342 (370)
T 3cqy_A 267 DIQSTLLDLTCHSIAQDILKLA----QEGELFVCGGGAFNAELMQRLAALLPGYRIDTTSALGVDPKWAEGIAFAWLAMR 342 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC----SSEEEEEESGGGGCHHHHHHHHHHCTTEEEEEGGGGTCCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCCcCCHHHHHHHHHhCCCCeeeeHHHhCCChhHHHHHHHHHHHHH
Confidence 3333444444555555555432 356899999999999999999999953 3321 234443334444566654
Q ss_pred h
Q psy8852 494 L 494 (634)
Q Consensus 494 ~ 494 (634)
.
T Consensus 343 ~ 343 (370)
T 3cqy_A 343 Y 343 (370)
T ss_dssp H
T ss_pred H
Confidence 4
No 137
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=67.77 E-value=15 Score=39.44 Aligned_cols=79 Identities=15% Similarity=0.208 Sum_probs=53.7
Q ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhhccC-CcCCC-CChhhHHHHHHHHH
Q psy8852 414 MKQFFTITQH-LVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKT-TLLTS-IDPDKAVVFGAAIQ 490 (634)
Q Consensus 414 r~~~e~~~~~-~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~-~~~~~-~~p~~ava~GAa~~ 490 (634)
..++...++. +.+-+...+..+.+..+ ++.|+|.||.+....+++.|.+..+. .+..+ .-.|.+++.|+|++
T Consensus 280 ~~dIAasfQ~~l~~~L~~~~~~a~~~tg-----~~~l~LaGGVa~N~~L~~~l~~~~~~~~v~vpp~~~D~G~aiGqA~~ 354 (576)
T 3ven_A 280 YRDLAATAQAALERAVFGLADSVLARTG-----ERTLFVAGGVGLNATMNGKLLTRSTVDKMFVPPVASDIGVSLGAAAA 354 (576)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHTSTTCSEEECCTTCSGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcC-----CCeEEecchHHHHHHHHHHHHHhcCCCeEEeCCCCCchHHHHHHHHH
Confidence 3445444443 33334555666666654 67999999999999999999877654 33332 33478899999999
Q ss_pred HhHhcCC
Q psy8852 491 ANFLSGN 497 (634)
Q Consensus 491 a~~~~~~ 497 (634)
+....+.
T Consensus 355 a~~~~g~ 361 (576)
T 3ven_A 355 VAVELGD 361 (576)
T ss_dssp HHHHTTC
T ss_pred HHHHcCC
Confidence 8766544
No 138
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=67.34 E-value=3.7 Score=32.97 Aligned_cols=19 Identities=16% Similarity=0.169 Sum_probs=16.8
Q ss_pred EEEEEeCCceEEEEEEECC
Q psy8852 135 SIGIDFGTTNSLVAIVRNN 153 (634)
Q Consensus 135 vvGID~GTt~s~va~~~~g 153 (634)
++|||+|+..+.+|+.+..
T Consensus 3 iLglD~G~kriGvAvsd~~ 21 (98)
T 1iv0_A 3 VGALDVGEARIGLAVGEEG 21 (98)
T ss_dssp EEEEEESSSEEEEEEECSC
T ss_pred EEEEEeCCCEEEEEEEeCC
Confidence 7999999999999997743
No 139
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=67.17 E-value=3.4 Score=44.21 Aligned_cols=23 Identities=22% Similarity=0.195 Sum_probs=20.1
Q ss_pred CceEEEEEeCCceEEEEEEE-CCe
Q psy8852 132 KCVSIGIDFGTTNSLVAIVR-NNI 154 (634)
Q Consensus 132 ~~~vvGID~GTt~s~va~~~-~g~ 154 (634)
+++++|||+|||++++++++ +|+
T Consensus 4 m~~~lgIDiGtts~k~~l~d~~G~ 27 (511)
T 3hz6_A 4 AFYIATFDIGTTEVKAALADRDGG 27 (511)
T ss_dssp CCEEEEEEECSSEEEEEEECTTSC
T ss_pred ccEEEEEEeCCCceEEEEECCCCC
Confidence 46899999999999999988 555
No 140
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=66.93 E-value=2.9 Score=44.35 Aligned_cols=23 Identities=30% Similarity=0.320 Sum_probs=18.1
Q ss_pred CceEEEEEeCCceEEEEEEE-CCe
Q psy8852 132 KCVSIGIDFGTTNSLVAIVR-NNI 154 (634)
Q Consensus 132 ~~~vvGID~GTt~s~va~~~-~g~ 154 (634)
+++++|||+|||++++++++ +|+
T Consensus 5 m~~~lgIDiGTts~Ka~l~d~~G~ 28 (482)
T 3h6e_A 5 TGATIVIDLGKTLSKVSLWDLDGR 28 (482)
T ss_dssp ---CEEEEECSSEEEEEEECTTSC
T ss_pred hceEEEEEcCCCCeEEEEEECCCc
Confidence 46899999999999999998 555
No 141
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=66.75 E-value=4 Score=43.55 Aligned_cols=22 Identities=23% Similarity=0.125 Sum_probs=19.5
Q ss_pred ceEEEEEeCCceEEEEEEE-CCe
Q psy8852 133 CVSIGIDFGTTNSLVAIVR-NNI 154 (634)
Q Consensus 133 ~~vvGID~GTt~s~va~~~-~g~ 154 (634)
++++|||+|||++++++++ +|+
T Consensus 4 ~~~lgIDiGtT~~k~~l~d~~g~ 26 (503)
T 2w40_A 4 NVILSIDQSTQSTKVFFYDEELN 26 (503)
T ss_dssp EEEEEEEECSSEEEEEEEETTCC
T ss_pred cEEEEEEeCCcceEEEEECCCCC
Confidence 5789999999999999998 555
No 142
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=66.71 E-value=4.2 Score=43.50 Aligned_cols=23 Identities=17% Similarity=0.291 Sum_probs=20.1
Q ss_pred CceEEEEEeCCceEEEEEEE--CCe
Q psy8852 132 KCVSIGIDFGTTNSLVAIVR--NNI 154 (634)
Q Consensus 132 ~~~vvGID~GTt~s~va~~~--~g~ 154 (634)
+++++|||+|||.+++++++ +|+
T Consensus 4 ~~~~lgIDiGtts~ka~l~d~~~G~ 28 (515)
T 3i8b_A 4 RTLVAGVDTSTQSCKVRVTDAETGE 28 (515)
T ss_dssp SCEEEEEEECSSEEEEEEEETTTCC
T ss_pred CcEEEEEEeccccEEEEEEECCCCe
Confidence 46899999999999999998 454
No 143
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=65.40 E-value=3.9 Score=43.64 Aligned_cols=23 Identities=26% Similarity=0.212 Sum_probs=20.0
Q ss_pred ceEEEEEeCCceEEEEEEE-CCee
Q psy8852 133 CVSIGIDFGTTNSLVAIVR-NNIP 155 (634)
Q Consensus 133 ~~vvGID~GTt~s~va~~~-~g~~ 155 (634)
++++|||+|||++++++++ +|++
T Consensus 6 ~~~lgIDiGtts~k~~l~d~~G~i 29 (501)
T 3g25_A 6 KYILSIDQGTTSSRAILFNQKGEI 29 (501)
T ss_dssp CEEEEEEECSSEEEEEEECTTSCE
T ss_pred cEEEEEEeCccceEEEEEcCCCCE
Confidence 5899999999999999998 5653
No 144
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=64.58 E-value=3.8 Score=43.65 Aligned_cols=22 Identities=23% Similarity=0.306 Sum_probs=18.7
Q ss_pred ceEEEEEeCCceEEEEEEE-CCe
Q psy8852 133 CVSIGIDFGTTNSLVAIVR-NNI 154 (634)
Q Consensus 133 ~~vvGID~GTt~s~va~~~-~g~ 154 (634)
++++|||+|||++++++++ +|+
T Consensus 2 ~~~lgiDiGtT~~k~~l~d~~g~ 24 (495)
T 2dpn_A 2 AFLLALDQGTTSSRAILFTLEGR 24 (495)
T ss_dssp -CEEEEEECSSEEEEEEECTTSC
T ss_pred cEEEEEeeCCcceEEEEECCCCC
Confidence 4689999999999999998 555
No 145
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=64.53 E-value=4.1 Score=43.65 Aligned_cols=22 Identities=27% Similarity=0.318 Sum_probs=19.7
Q ss_pred ceEEEEEeCCceEEEEEEE-CCe
Q psy8852 133 CVSIGIDFGTTNSLVAIVR-NNI 154 (634)
Q Consensus 133 ~~vvGID~GTt~s~va~~~-~g~ 154 (634)
++++|||+|||++++++++ +|+
T Consensus 26 ~~~lgIDiGtts~k~~l~d~~G~ 48 (520)
T 4e1j_A 26 GYILAIDQGTTSTRAIVFDGNQK 48 (520)
T ss_dssp CEEEEEEECSSEEEEEEECTTSC
T ss_pred CeEEEEEeCCcceEEEEECCCCC
Confidence 5899999999999999998 665
No 146
>4ijn_A Acetate kinase, acetokinase; proprionate kinase, ATP-dependent, metabolic intermediate biosynthesis, acetyl-COA biosynthesis, hydrolysis; HET: AMP; 1.70A {Mycobacterium smegmatis}
Probab=64.30 E-value=64 Score=32.72 Aligned_cols=44 Identities=5% Similarity=0.012 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCc-CcHHHHHHHHhhc
Q psy8852 422 QHLVNRTILLSSKALMDANLTIKDINNVILVGGST-RMKHIHEGVSNFF 469 (634)
Q Consensus 422 ~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s-~~p~v~~~l~~~f 469 (634)
+-++.++...|-...... .++|.|+++||-+ +.+.+++.+.+.+
T Consensus 304 d~f~yriak~Iga~aa~L----G~vDaIVfTGGIgEns~~vr~~I~~~l 348 (398)
T 4ijn_A 304 DVYIHRLRKYIGAYMAVL----GRTDVISFTAGVGENVPPVRRDALAGL 348 (398)
T ss_dssp HHHHHHHHHHHHHHHHHH----SSCCEEEEEHHHHHHCHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHh----CCCcEEEECCccccccHHHHHHHHHHH
Confidence 334444444444333332 3689999999988 6788999988765
No 147
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=63.15 E-value=4.6 Score=43.00 Aligned_cols=22 Identities=23% Similarity=0.253 Sum_probs=19.3
Q ss_pred ceEEEEEeCCceEEEEEEE-CCe
Q psy8852 133 CVSIGIDFGTTNSLVAIVR-NNI 154 (634)
Q Consensus 133 ~~vvGID~GTt~s~va~~~-~g~ 154 (634)
++++|||+|||++++++++ +|+
T Consensus 3 ~~~lgiDiGtt~~k~~l~d~~g~ 25 (497)
T 2zf5_O 3 KFVLSLDEGTTSARAIIFDRESN 25 (497)
T ss_dssp CEEEEEEECSSEEEEEEECTTCC
T ss_pred cEEEEEecCCchhEEEEECCCCC
Confidence 5789999999999999998 555
No 148
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=61.94 E-value=6.2 Score=33.86 Aligned_cols=21 Identities=29% Similarity=0.321 Sum_probs=18.2
Q ss_pred ceEEEEEeCCceEEEEEEECC
Q psy8852 133 CVSIGIDFGTTNSLVAIVRNN 153 (634)
Q Consensus 133 ~~vvGID~GTt~s~va~~~~g 153 (634)
..++|||+|+..+.+|+.+..
T Consensus 3 ~~iLglD~G~kriGvAvsd~~ 23 (138)
T 1nu0_A 3 GTLMAFDFGTKSIGVAVGQRI 23 (138)
T ss_dssp CEEEEEECCSSEEEEEEEETT
T ss_pred CeEEEEEeCCCEEEEEEEcCC
Confidence 358999999999999998854
No 149
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=61.94 E-value=8.6 Score=38.80 Aligned_cols=42 Identities=19% Similarity=0.319 Sum_probs=27.4
Q ss_pred eeeeecchhHHHHHhh-----hcc--CccceEEEEEEeCCCeEEEEEEE
Q psy8852 291 VLRLLNEPTSAAIAYK-----LDK--NIFEGIFAVYDLGGGTFDISILK 332 (634)
Q Consensus 291 ~~~li~Ep~AAa~~y~-----~~~--~~~~~~vlV~D~GggT~dvsv~~ 332 (634)
.+.+|+-.+-|.+.|. ... ....++++|+|+|||+|.++...
T Consensus 110 ~v~VIsG~eEa~~~~~gv~~~l~~~~~~~~~t~~v~DiGGGStei~~~~ 158 (353)
T 3aap_A 110 EAKTITGNDEALFDWLAVNYKLDTLKSVQNKSVGVMDMGGASVQIVFPM 158 (353)
T ss_dssp EEEECCHHHHHHHHHHHHHHHTTCSSSCCSSCEEEEEECSSEEEEEEEC
T ss_pred eEEECChHHHHHHHHHHHHHHhhhccccccccEEEEEeCCCceEEEEec
Confidence 4466666655555442 221 11334699999999999999863
No 150
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=61.58 E-value=1.5e+02 Score=30.75 Aligned_cols=57 Identities=14% Similarity=0.112 Sum_probs=39.9
Q ss_pred CHHHHHHHHHHHHHcCCc--eeeeecchhHHHHHhhhccCccceEEEEEEeCCCeEEEEEEE
Q psy8852 273 NDIQRQFTKNAAKLAGLN--VLRLLNEPTSAAIAYKLDKNIFEGIFAVYDLGGGTFDISILK 332 (634)
Q Consensus 273 ~~~qr~~l~~aa~~aGl~--~~~li~Ep~AAa~~y~~~~~~~~~~vlV~D~GggT~dvsv~~ 332 (634)
...-.+.++++...-|++ ++.++++..|++++..+... ..++-+=+|-|+=-..+.+
T Consensus 171 g~dv~~~L~~al~r~~l~v~v~al~NDtv~tlla~~y~~~---~~~iglIlGTG~na~yve~ 229 (451)
T 1bdg_A 171 GHNVAELLQTELDKRELNVKCVAVVNDTVGTLASCALEDP---KCAVGLIVGTGTNVAYIED 229 (451)
T ss_dssp TSBHHHHHHHHHHTTTCCEEEEEEECHHHHHHHHHHTTCT---TEEEEEEESSSEEEEEEEE
T ss_pred CCcHHHHHHHHHHHcCCCcceEEEEEchHHHHHHhcccCC---CcEEEEEEeCCcceEEEEc
Confidence 345678888888877876 35899999999998766643 3556666788754444433
No 151
>3khy_A Propionate kinase; csgid, IDP01739, ATP-binding, nucleotide-binding, transferase, structural genomics; 1.98A {Francisella tularensis subsp}
Probab=59.54 E-value=1e+02 Score=31.07 Aligned_cols=25 Identities=12% Similarity=0.400 Sum_probs=21.9
Q ss_pred CCCeEEEEcCCc-CcHHHHHHHHhhc
Q psy8852 445 DINNVILVGGST-RMKHIHEGVSNFF 469 (634)
Q Consensus 445 ~i~~ViLvGG~s-~~p~v~~~l~~~f 469 (634)
.+|.|+++||-+ ..+.+++.+.+.+
T Consensus 313 gvDaIVFTgGIgEns~~iR~~i~~~l 338 (384)
T 3khy_A 313 KLDALVFTGGIGENAANIRKNIISKL 338 (384)
T ss_dssp SCCEEEEEHHHHHHCHHHHHHHHHHT
T ss_pred CCCEEEECCccccCcHHHHHHHHhhc
Confidence 699999999988 8899999988765
No 152
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=58.94 E-value=7.5 Score=37.49 Aligned_cols=22 Identities=14% Similarity=0.270 Sum_probs=19.2
Q ss_pred ceEEEEEeCCceEEEEEEECCe
Q psy8852 133 CVSIGIDFGTTNSLVAIVRNNI 154 (634)
Q Consensus 133 ~~vvGID~GTt~s~va~~~~g~ 154 (634)
++.++||+|+|+++++++++++
T Consensus 2 ~MlL~IDIGNT~iK~gl~d~~~ 23 (266)
T 3djc_A 2 SLILCIDVGNSHIYGGVFDGDE 23 (266)
T ss_dssp -CEEEEEECSSEEEEEEEETTE
T ss_pred ceEEEEEECCCeEEEEEEECCE
Confidence 4689999999999999998775
No 153
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=58.42 E-value=6.2 Score=42.10 Aligned_cols=22 Identities=27% Similarity=0.265 Sum_probs=19.3
Q ss_pred ceEEEEEeCCceEEEEEEE-CCe
Q psy8852 133 CVSIGIDFGTTNSLVAIVR-NNI 154 (634)
Q Consensus 133 ~~vvGID~GTt~s~va~~~-~g~ 154 (634)
++++|||+|||++++++++ +|+
T Consensus 2 ~~~lgiDiGtts~k~~l~d~~G~ 24 (504)
T 2d4w_A 2 DYVLAIDQGTTSSRAIVFDHSGE 24 (504)
T ss_dssp CEEEEEEECSSEEEEEEECTTSC
T ss_pred CEEEEEecCCcceEEEEECCCCC
Confidence 4789999999999999998 565
No 154
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=58.36 E-value=1.5e+02 Score=30.60 Aligned_cols=54 Identities=15% Similarity=0.156 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHcC---CceeeeecchhHHHHHhhhccCccceEEEEEEeCCCeEEEEEE
Q psy8852 274 DIQRQFTKNAAKLAG---LNVLRLLNEPTSAAIAYKLDKNIFEGIFAVYDLGGGTFDISIL 331 (634)
Q Consensus 274 ~~qr~~l~~aa~~aG---l~~~~li~Ep~AAa~~y~~~~~~~~~~vlV~D~GggT~dvsv~ 331 (634)
..-.+.+++|.+.-| ++++.++++.+|+.++.++... ...+-+=+|-||= .+.+
T Consensus 160 ~dv~~lL~~al~r~~~~~v~vvAivNDTvgTLla~~y~~~---~~~iglIlGTGtN-a~y~ 216 (445)
T 3hm8_A 160 QDVVSLLREAITRRQAVELNVVAIVNDTVGTMMSCGYEDP---RCEIGLIVGTGTN-ACYM 216 (445)
T ss_dssp SBHHHHHHHHHHHTTCSCCCSEEEECHHHHHHHHHHTTCT---TEEEEEEESSSEE-EEEE
T ss_pred CcHHHHHHHHHHhcCCCCcceEEEecCcHHHHHhhccCCC---CceEEEEEeCCce-EEEE
Confidence 445677888887753 4678999999999998766543 3445555677754 4444
No 155
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=57.73 E-value=7.4 Score=38.61 Aligned_cols=40 Identities=18% Similarity=0.040 Sum_probs=27.7
Q ss_pred ceeeeecchhHHHHHhhhccCccceEEEEEEeCCCeEEEEEEE
Q psy8852 290 NVLRLLNEPTSAAIAYKLDKNIFEGIFAVYDLGGGTFDISILK 332 (634)
Q Consensus 290 ~~~~li~Ep~AAa~~y~~~~~~~~~~vlV~D~GggT~dvsv~~ 332 (634)
+......-|.|.|...+.... ...+++|+||.|||+..+.
T Consensus 106 p~~~aaanw~ASa~~~A~~~~---~~~llvDIGsTTTDIipi~ 145 (334)
T 3cet_A 106 NMKVSASNWCGTAKWVSKNIE---ENCILVDMGSTTTDIIPIV 145 (334)
T ss_dssp GGGTBCCSSHHHHHHHHHHTC---SSEEEEEECSSCEEEEEEE
T ss_pred HHHHHhcCHHHHHHHHHHhcC---CCEEEEEcCcchhhhhhhc
Confidence 344456778787774333321 2478999999999999876
No 156
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=57.47 E-value=6.2 Score=42.81 Aligned_cols=23 Identities=26% Similarity=0.543 Sum_probs=19.5
Q ss_pred CceEEEEEeCCceEEEEEEE--CCe
Q psy8852 132 KCVSIGIDFGTTNSLVAIVR--NNI 154 (634)
Q Consensus 132 ~~~vvGID~GTt~s~va~~~--~g~ 154 (634)
+++++|||+|||.+++++++ +|+
T Consensus 4 ~~~~lgIDiGTts~Ka~l~d~~~G~ 28 (572)
T 3jvp_A 4 TKYTIGVDYGTESGRAVLIDLSNGQ 28 (572)
T ss_dssp -CEEEEEEECSSEEEEEEEETTTCC
T ss_pred CCEEEEEecCCcceEEEEEECCCCe
Confidence 46899999999999999998 454
No 157
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=57.37 E-value=6.5 Score=41.68 Aligned_cols=23 Identities=17% Similarity=0.326 Sum_probs=19.3
Q ss_pred CceEEEEEeCCceEEEEEEE-CCe
Q psy8852 132 KCVSIGIDFGTTNSLVAIVR-NNI 154 (634)
Q Consensus 132 ~~~vvGID~GTt~s~va~~~-~g~ 154 (634)
+++++|||+|||.+++++++ +|+
T Consensus 3 ~~~~lgiDiGtts~k~~l~d~~g~ 26 (489)
T 2uyt_A 3 FRNCVAVDLGASSGRVMLARYERE 26 (489)
T ss_dssp CEEEEEEEECSSEEEEEEEEEEGG
T ss_pred cceEEEEEecCCCceEEEEEecCc
Confidence 35789999999999999987 443
No 158
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=56.17 E-value=6.5 Score=41.64 Aligned_cols=21 Identities=33% Similarity=0.553 Sum_probs=18.2
Q ss_pred eEEEEEeCCceEEEEEEE-CCe
Q psy8852 134 VSIGIDFGTTNSLVAIVR-NNI 154 (634)
Q Consensus 134 ~vvGID~GTt~s~va~~~-~g~ 154 (634)
+++|||+|||++++++++ +|+
T Consensus 1 ~~lgiDiGtt~~k~~l~d~~g~ 22 (484)
T 2itm_A 1 MYIGIDLGTSGVKVILLNEQGE 22 (484)
T ss_dssp CEEEEEECSSEEEEEEECTTSC
T ss_pred CEEEEEecCcccEEEEECCCCC
Confidence 369999999999999998 555
No 159
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=55.45 E-value=54 Score=37.61 Aligned_cols=57 Identities=11% Similarity=0.128 Sum_probs=38.5
Q ss_pred CHHHHHHHHHHHHHc-CC--ceeeeecchhHHHHHhhhccCccceEEEEEEeCCCeEEEEEEE
Q psy8852 273 NDIQRQFTKNAAKLA-GL--NVLRLLNEPTSAAIAYKLDKNIFEGIFAVYDLGGGTFDISILK 332 (634)
Q Consensus 273 ~~~qr~~l~~aa~~a-Gl--~~~~li~Ep~AAa~~y~~~~~~~~~~vlV~D~GggT~dvsv~~ 332 (634)
...-.+.++++...- |+ +++.++++..|++++..+... ..++-+=+|-|+=-..+.+
T Consensus 630 g~dv~~~L~~al~r~~~~~v~~val~NDtv~tlla~~y~~~---~~~iglIlGTG~na~y~e~ 689 (917)
T 1cza_N 630 GHDVVTLLRDAIKRREEFDLDVVAVVNDTVGTMMTCAYEEP---TCEVGLIVGTGSNACYMEE 689 (917)
T ss_dssp TSBHHHHHHHHHHHHTSCCCEEEEEECHHHHHHHHHHTTCT---TEEEEEEESSSEEEEEEEE
T ss_pred CCcHHHHHHHHHHhcCCCCceEEEEEEccHHHHHHhccCCC---CcEEEEEEeCCeeEEEEEc
Confidence 455667788887654 45 589999999999998766643 3555566777754444433
No 160
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=55.11 E-value=7.4 Score=33.91 Aligned_cols=19 Identities=32% Similarity=0.466 Sum_probs=16.8
Q ss_pred eEEEEEeCCceEEEEEEEC
Q psy8852 134 VSIGIDFGTTNSLVAIVRN 152 (634)
Q Consensus 134 ~vvGID~GTt~s~va~~~~ 152 (634)
.++|||+|+..+.+|+.+.
T Consensus 4 riLGiDpG~~riGvAv~d~ 22 (150)
T 1vhx_A 4 RILGLDLGTKTLGVALSDE 22 (150)
T ss_dssp EEEEEEECSSEEEEEEECT
T ss_pred EEEEEEccCCEEEEEEEEC
Confidence 3799999999999999873
No 161
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=52.36 E-value=17 Score=38.02 Aligned_cols=43 Identities=21% Similarity=0.362 Sum_probs=29.7
Q ss_pred ceeeeecchhHHHHHhh-----hccC-----------ccceEEEEEEeCCCeEEEEEEE
Q psy8852 290 NVLRLLNEPTSAAIAYK-----LDKN-----------IFEGIFAVYDLGGGTFDISILK 332 (634)
Q Consensus 290 ~~~~li~Ep~AAa~~y~-----~~~~-----------~~~~~vlV~D~GggT~dvsv~~ 332 (634)
..+++|+-.+-|.+.|. +..- .....++|+|+|||+|.++...
T Consensus 150 ~~v~VIsG~eEa~y~wl~vn~~lg~~~~~~~~~~~~~~~~~t~gvlDlGGgStqi~~~~ 208 (456)
T 3cj1_A 150 RGARILSGQDEGVFGWVTANYLLENFIKYGWVGRWIRPRKGTLGAMDLGGASTQITFET 208 (456)
T ss_dssp EEEEECCHHHHHHHHHHHHHHHTTTTSCCEETTEECSSCCCCCEEEEECSSEEEEEEEC
T ss_pred CceEEcCchHHhhhhHHHHHhhhcccccccccccccccCCCceEEEEcCCCceEEEecc
Confidence 46788887777766652 2210 0145689999999999999764
No 162
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=52.29 E-value=18 Score=31.73 Aligned_cols=18 Identities=28% Similarity=0.532 Sum_probs=16.3
Q ss_pred eEEEEEeCCceEEEEEEE
Q psy8852 134 VSIGIDFGTTNSLVAIVR 151 (634)
Q Consensus 134 ~vvGID~GTt~s~va~~~ 151 (634)
.++|||-|++.+..++..
T Consensus 2 ~ILGIDPGl~~tG~gvi~ 19 (158)
T 1hjr_A 2 IILGIDPGSRVTGYGVIR 19 (158)
T ss_dssp EEEEEECCSSEEEEEEEE
T ss_pred EEEEEccCCCCeeEEEEE
Confidence 479999999999999886
No 163
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=49.79 E-value=12 Score=36.63 Aligned_cols=63 Identities=16% Similarity=0.128 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcC--cHHHHHHHHhhccCCcCCCCChhhHHHHHHHHHHh
Q psy8852 421 TQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTR--MKHIHEGVSNFFKTTLLTSIDPDKAVVFGAAIQAN 492 (634)
Q Consensus 421 ~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~--~p~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~ 492 (634)
+..++++....+-..+...-. . +...|+|.||.+. .|++.+.+++.+ .. |..+.+.||++++.
T Consensus 228 A~~i~~~~~~~L~~~l~~l~~-~-~p~~VvlgGgv~~~~~~~l~~~l~~~i----~~---~~~~~~~GAa~la~ 292 (305)
T 1zc6_A 228 ADALLRQAGEDAWAIARALDP-Q-DELPVALCGGLGQALRDWLPPGFRQRL----VA---PQGDSAQGALLLLQ 292 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHCT-T-CCSCEEEESHHHHHTGGGSCHHHHHHC----CC---CSSCHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHhc-C-CCCeEEEECCchHhHHHHHHHHHHhhc----cC---CCCCHHHHHHHHHh
Confidence 334444444444444443322 2 5678999999864 566777776653 11 45667899999875
No 164
>3r9p_A ACKA; ssgcid, seattle structural genomics center for infectious DI acetate kinase, transferase; HET: PGE; 1.90A {Mycobacterium avium subsp} PDB: 3p4i_A 4dq8_A
Probab=49.43 E-value=1.9e+02 Score=29.11 Aligned_cols=44 Identities=7% Similarity=0.003 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcC-cHHHHHHHHhhc
Q psy8852 422 QHLVNRTILLSSKALMDANLTIKDINNVILVGGSTR-MKHIHEGVSNFF 469 (634)
Q Consensus 422 ~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~-~p~v~~~l~~~f 469 (634)
+-++.++...|-......+ .+|.|+++||-+. .+.+++.+.+.+
T Consensus 295 d~f~yri~k~Iga~aa~Lg----~vDaIVfTGGIgens~~vR~~i~~~l 339 (391)
T 3r9p_A 295 SVFTHRLRKYIGAYLAVLG----HTDVISFTAGIGENDAAVRRDAVSGM 339 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHS----SCCEEEEEHHHHHHCHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHhC----CCCEEEECcccccCCHHHHHHHHHHH
Confidence 3344444444444333322 5899999999886 799999988765
No 165
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=49.36 E-value=24 Score=34.05 Aligned_cols=47 Identities=21% Similarity=0.226 Sum_probs=32.2
Q ss_pred CCeEEEEcCCcCcHHHHHHHHhhccCC-------cCCCCChhhHHHHHHHHHHh
Q psy8852 446 INNVILVGGSTRMKHIHEGVSNFFKTT-------LLTSIDPDKAVVFGAAIQAN 492 (634)
Q Consensus 446 i~~ViLvGG~s~~p~v~~~l~~~f~~~-------~~~~~~p~~ava~GAa~~a~ 492 (634)
++.|+|.||.+..+.+.+.+++.+... +..+.....+.+.||+.++.
T Consensus 234 p~~ivlgG~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~a~~~GAa~l~~ 287 (289)
T 2aa4_A 234 CQCVVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALLAQ 287 (289)
T ss_dssp CSEEEEEHHHHTSTTHHHHHHHHHTTSCGGGCCEEEECSCSSCHHHHHHHHHHH
T ss_pred CCEEEEeCcccccHHHHHHHHHHHHHhcCccCCEEEECCCCCchHHHHHHHHHh
Confidence 567999998876677777777666331 22233445688999998763
No 166
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=48.99 E-value=8.8 Score=40.81 Aligned_cols=30 Identities=20% Similarity=0.195 Sum_probs=24.4
Q ss_pred CcEEEEeCCCCCHHHHHHHHHHHHHcCCce
Q psy8852 262 FGAVITVPAYFNDIQRQFTKNAAKLAGLNV 291 (634)
Q Consensus 262 ~~~viTVPa~~~~~qr~~l~~aa~~aGl~~ 291 (634)
..++.-+|..++...-.++.+++...|++.
T Consensus 131 ~~~I~v~~~~i~~~d~a~~in~a~~~g~~i 160 (607)
T 1nbw_A 131 EGWIVLIDDAVDFLDAVWWLNEALDRGINV 160 (607)
T ss_dssp TCEEEEECSSSCHHHHHHHHHHHHHTTCCE
T ss_pred CCEEEECCCccCHHHHHHHHHHHHHcCCcE
Confidence 345555899999999999999999998854
No 167
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=48.18 E-value=46 Score=34.93 Aligned_cols=25 Identities=28% Similarity=0.525 Sum_probs=22.4
Q ss_pred cceEEEEEEeCCCeEEEEEEEEeCC
Q psy8852 312 FEGIFAVYDLGGGTFDISILKFKNG 336 (634)
Q Consensus 312 ~~~~vlV~D~GggT~dvsv~~~~~~ 336 (634)
+.+.+|.+|+||.++-+.++++.+.
T Consensus 78 E~G~~LalDlGGTn~Rv~~V~l~g~ 102 (485)
T 3o8m_A 78 ETGDFLALDLGGTNLRVVLVKLGGN 102 (485)
T ss_dssp CEEEEEEEEESSSEEEEEEEEEESS
T ss_pred cceEEEEEEecCCeEEEEEEEECCC
Confidence 5678999999999999999999764
No 168
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=47.37 E-value=1.7e+02 Score=30.50 Aligned_cols=55 Identities=15% Similarity=0.229 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHcC---CceeeeecchhHHHHHhhhccCccceEEEEEEeCCCeEEEEEEE
Q psy8852 274 DIQRQFTKNAAKLAG---LNVLRLLNEPTSAAIAYKLDKNIFEGIFAVYDLGGGTFDISILK 332 (634)
Q Consensus 274 ~~qr~~l~~aa~~aG---l~~~~li~Ep~AAa~~y~~~~~~~~~~vlV~D~GggT~dvsv~~ 332 (634)
..-.+.+++|++.-| ++++.++++.+|..++.++... ...+-+=+|-||= .+.+.
T Consensus 184 ~DVv~lL~~al~r~g~~~v~v~AlvNDTVgTL~s~aY~~~---~~~iGlI~GTGtN-a~Y~E 241 (470)
T 3f9m_A 184 NNVVGLLRDAIKRRGDFEMDVVAMVNDTVATMISCYYEDH---QCEVGMIVGTGCN-ACYME 241 (470)
T ss_dssp SBHHHHHHHHHHHHCSCCCEEEEEECHHHHHHHHHHTTCT---TEEEEEEESSSEE-EEEEE
T ss_pred ccHHHHHHHHHHhcCCCCCcEEEEEEcCHHHHHhcccCCC---CceEEEEEecCCc-eEEee
Confidence 445678889998887 3588999999999988766543 3444445677754 44443
No 169
>3sk3_A Acetate kinase, acetokinase; actin-like ATPase domain, askha superfamily of phosphotransf acetokinase, ATP binding, phosphotransferase; HET: CIT; 1.90A {Salmonella enterica subsp} PDB: 3slc_A
Probab=46.65 E-value=1.8e+02 Score=29.72 Aligned_cols=139 Identities=17% Similarity=0.132 Sum_probs=66.2
Q ss_pred cceEEEEEEeCCCeEEEEEEEEeCCeEEEEEEcCCCCc-----c--chhHHHHHHHHHHHHHhhccCCHHHHHHHHHHHH
Q psy8852 312 FEGIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDSNL-----G--GDDFDYCLFSWIVKNAFLKKLSYKDVNILMIKSR 384 (634)
Q Consensus 312 ~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~l-----G--G~~id~~l~~~l~~~~~~~~~~~~~~~~L~~~~e 384 (634)
.+.+++++-+|+|. |+.-+.+|.. +=.+-|-.++ | .-++|-.+.-|++++.+... ..+.+++..=
T Consensus 217 ~~~~lIv~HLGnGa---Si~Ai~~Gks-vDTsMG~TpleGl~mgtRsGdiDp~~l~~l~~~~g~s~---~ei~~~Lnk~- 288 (415)
T 3sk3_A 217 EELNIITCHLGNGG---SVSAIRNGKC-VDTSMGLTPLEGLVMGTRSGDIDPAIIFHLHDTLGMSV---DQINKMLTKE- 288 (415)
T ss_dssp GGCCEEEEECSSSC---EEEEEETTEE-EEECCCCCCSCC-------CCCCHHHHHHHHHHHTCCH---HHHHHHC----
T ss_pred HHCcEEEEEeCCCc---eEEEEECCEE-EEeCCCcCCCCCccCCCCCCCCChHHHHHHHHhcCCCH---HHHHHHHhcC-
Confidence 45689999999995 4444555542 1112222222 2 23678888888877654322 2211111100
Q ss_pred HHHHHhcCCcceEEEEEecCCceeEEEE-eHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCc-CcHHHH
Q psy8852 385 EIKELLSYQSSVKLNVKLSDKKIVNITI-DMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGST-RMKHIH 462 (634)
Q Consensus 385 ~~K~~Ls~~~~~~i~i~~~~g~~~~~~i-tr~~~e~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s-~~p~v~ 462 (634)
.--..+|..++ |-.++.-.. ..+.-..+++-++.++.+.|-......+ ..+|.|+++||-+ +.+.||
T Consensus 289 SGLlglsG~S~--------D~R~le~~~~gd~~A~lA~d~f~yri~k~IGa~aa~L~---G~vDaIVFTgGIGEns~~vR 357 (415)
T 3sk3_A 289 SGLLGLTEVTS--------DCRYVEDNYATKEDAKRAMDVYCHRLAKYIGSYTALMD---GRLDAVVFTGGIGENAAMVR 357 (415)
T ss_dssp ---CCSTTTTC--------GGGCSSCCCCCHHHHHHHHHHHHHHHHHHHHHGGGGST---TCCCEEEEEHHHHTTCHHHH
T ss_pred cCcccccCCcc--------hHHHHHHHHcCCHhHHHHHHHHHHHHHHHHHHHHHHhC---CCCCEEEECCccccCCHHHH
Confidence 00000121110 000110000 1122222333444444444443333221 3599999999987 799999
Q ss_pred HHHHhhc
Q psy8852 463 EGVSNFF 469 (634)
Q Consensus 463 ~~l~~~f 469 (634)
+.+.+.+
T Consensus 358 ~~v~~~l 364 (415)
T 3sk3_A 358 ELSLGKL 364 (415)
T ss_dssp HHHHHTC
T ss_pred HHHHhhc
Confidence 9987655
No 170
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=46.14 E-value=43 Score=33.93 Aligned_cols=48 Identities=15% Similarity=0.261 Sum_probs=33.4
Q ss_pred CCCeEEEEcCCcCcHH-HHHHHHhhccC----CcCCCCChhhHHHHHHHHHHh
Q psy8852 445 DINNVILVGGSTRMKH-IHEGVSNFFKT----TLLTSIDPDKAVVFGAAIQAN 492 (634)
Q Consensus 445 ~i~~ViLvGG~s~~p~-v~~~l~~~f~~----~~~~~~~p~~ava~GAa~~a~ 492 (634)
+++.|+|.||.+..+. +.+.+++.+.. .+........+.+.||+..+.
T Consensus 295 ~p~~IvlgGgi~~~~~~l~~~i~~~l~~~~~~~i~~~~~~~~a~~~GAa~l~~ 347 (381)
T 1saz_A 295 EVDFIVLTGGLAHEKEFLVPWITKRVSFIAPVLVFPGSNEEKALALSALRVLR 347 (381)
T ss_dssp CCSEEEEEEGGGGCTTTHHHHHHHHHTTTSCEEEEEBCCHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCcCccChHHHHHHHHHHHHhhcCeEEEecCcchhHHHHHHHHHHc
Confidence 5789999999887543 77777776643 222234445689999998764
No 171
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=45.50 E-value=16 Score=35.55 Aligned_cols=67 Identities=9% Similarity=-0.137 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCc--HHHHHHHHhhccCCcCCCCChhhHHHHHHHHHHhH
Q psy8852 421 TQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRM--KHIHEGVSNFFKTTLLTSIDPDKAVVFGAAIQANF 493 (634)
Q Consensus 421 ~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~--p~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~ 493 (634)
...++++....+-..+ .... ..+++.|+|.||.+.. +.+++.+++.. .++ ..|..+...||+.++..
T Consensus 212 A~~i~~~~~~~La~~i-~~~~-~~~p~~vvlgGGv~~~~~~~l~~~l~~~~-~~i---~~~~~a~~~GA~~la~~ 280 (291)
T 1zbs_A 212 VYSLVQNSFDDFLVRN-VLRY-NRPDLPLHFIGSVAFHYREVLSSVIKKRG-LTL---GSVLQSPMEGLIQYHHN 280 (291)
T ss_dssp HHHHHHHHHHHHHHHH-TGGG-CCTTSCEEEESHHHHHTHHHHHHHHHHTT-CCE---EEEESCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-hccc-CCCCceEEEECchHHhhHHHHHHHHHHcC-Cee---cccCcCHHHHHHHHHHh
Confidence 3344444444444444 2221 1156789999998876 66666666543 122 22446778999999864
No 172
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=45.47 E-value=24 Score=31.13 Aligned_cols=18 Identities=39% Similarity=0.455 Sum_probs=16.4
Q ss_pred eEEEEEeCCceEEEEEEE
Q psy8852 134 VSIGIDFGTTNSLVAIVR 151 (634)
Q Consensus 134 ~vvGID~GTt~s~va~~~ 151 (634)
.++|||-|++.+..++..
T Consensus 2 rILGIDPGl~~tG~gvi~ 19 (166)
T 4ep4_A 2 VVAGIDPGITHLGLGVVA 19 (166)
T ss_dssp EEEEEECCSSEEEEEEEE
T ss_pred EEEEEccccCceEEEEEE
Confidence 479999999999999987
No 173
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=41.92 E-value=98 Score=32.19 Aligned_cols=26 Identities=19% Similarity=0.492 Sum_probs=23.1
Q ss_pred cceEEEEEEeCCCeEEEEEEEEeCCe
Q psy8852 312 FEGIFAVYDLGGGTFDISILKFKNGV 337 (634)
Q Consensus 312 ~~~~vlV~D~GggT~dvsv~~~~~~~ 337 (634)
+.+.++.+|+||+++-+.++...+..
T Consensus 59 E~G~~laiDlGGTnirv~lV~~~G~~ 84 (457)
T 2yhx_A 59 QAGSFLAIVMGGGDLEVILISLAGRQ 84 (457)
T ss_dssp CCEEEEEEEECSSEEEEEEEEEETTE
T ss_pred ccceEEEEEeCCCeEEEEEEEeCCCe
Confidence 66788999999999999999988765
No 174
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=41.62 E-value=25 Score=35.57 Aligned_cols=29 Identities=14% Similarity=0.259 Sum_probs=23.6
Q ss_pred CcccCCCceEEEEEeCCceEEEEEEECCe
Q psy8852 126 DISVKNKCVSIGIDFGTTNSLVAIVRNNI 154 (634)
Q Consensus 126 ~~~~p~~~~vvGID~GTt~s~va~~~~g~ 154 (634)
|.-.|...+++|||+|.|++.+++.++|+
T Consensus 2 ~~~n~d~~~~lgiDIGgt~i~~~l~d~G~ 30 (366)
T 3mcp_A 2 MMYTNDNRIVMTLDAGGTNFVFSAIQGGK 30 (366)
T ss_dssp CTTTTCCCEEEEEECSSSEEEEEEEETTE
T ss_pred ccCCCCCCEEEEEEECcceEEEEEEECCE
Confidence 34567778999999999999999988443
No 175
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=38.68 E-value=19 Score=35.15 Aligned_cols=56 Identities=13% Similarity=0.057 Sum_probs=33.8
Q ss_pred CcEEEEeCCCCCHHHHHHHHHHHHHcC-CceeeeecchhHHHHHhhhccCccceEEEEEEeCCCe
Q psy8852 262 FGAVITVPAYFNDIQRQFTKNAAKLAG-LNVLRLLNEPTSAAIAYKLDKNIFEGIFAVYDLGGGT 325 (634)
Q Consensus 262 ~~~viTVPa~~~~~qr~~l~~aa~~aG-l~~~~li~Ep~AAa~~y~~~~~~~~~~vlV~D~GggT 325 (634)
..+.|++|...+......+.. ..+ --.+.+.++..||+++-. . ....+++=+|-|.
T Consensus 77 ~~igig~pG~v~~~~~~~l~~---~~~~~~pv~v~NDa~aaa~ge~---~--~~~~v~v~~GTGi 133 (305)
T 1zc6_A 77 CAIGLGLSGVHNRQWAGEFES---QAPGFARLSLATDGYTTLLGAH---G--GQPGIIVALGTGS 133 (305)
T ss_dssp EEEEEEESCCCTTSHHHHHHH---TCCCCSEEEEECHHHHHHHHHT---T--TSSEEEEEESSSE
T ss_pred ceEEEEecCCCchHHHHHHHH---hCCCCceEEEECCHHHHHHhhc---C--CCCeEEEEecCCe
Confidence 458899998766544333222 221 135688899999888642 1 1234566678776
No 176
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=38.57 E-value=25 Score=33.86 Aligned_cols=72 Identities=14% Similarity=0.089 Sum_probs=38.4
Q ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhhccCCcCCCCChhhHHHHHHHHHHh
Q psy8852 413 DMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTTLLTSIDPDKAVVFGAAIQAN 492 (634)
Q Consensus 413 tr~~~e~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~ 492 (634)
-++..+.+-..++......|+..+++..-....--.|+++||.+. .+.+ .+... ...+| ..+-.|..+...
T Consensus 181 g~nT~~ai~sGi~~g~~g~i~~~i~~~~~e~~~~~~vi~TGG~a~--~l~~----~~~~~--~~~~~-~LvL~GL~~i~~ 251 (268)
T 2h3g_X 181 GKNTVSAMQSGILYGYVGQVEGIVKRMKEEAKQEPKVIATGGLAK--LISE----ESNVI--DVVDP-FLTLKGLYMLYE 251 (268)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCEEEEESTTHH--HHHH----HCSSC--SEECT-THHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCCHH--HHHh----hCCCC--CEECc-chHHHHHHHHHH
Confidence 445556666666655555555544432111111237999999876 3333 33322 22444 456788877664
Q ss_pred H
Q psy8852 493 F 493 (634)
Q Consensus 493 ~ 493 (634)
.
T Consensus 252 ~ 252 (268)
T 2h3g_X 252 R 252 (268)
T ss_dssp H
T ss_pred h
Confidence 3
No 177
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=38.07 E-value=90 Score=32.56 Aligned_cols=25 Identities=36% Similarity=0.611 Sum_probs=22.0
Q ss_pred cceEEEEEEeCCCeEEEEEEEEeCC
Q psy8852 312 FEGIFAVYDLGGGTFDISILKFKNG 336 (634)
Q Consensus 312 ~~~~vlV~D~GggT~dvsv~~~~~~ 336 (634)
+.+.+|.+|+||+++-|..+++.++
T Consensus 75 E~G~fLAlDlGGTNfRV~~V~L~g~ 99 (470)
T 3f9m_A 75 EVGDFLSLDLGGTNFRVMLVKVGEG 99 (470)
T ss_dssp CCEEEEEEEESSSEEEEEEEEEEC-
T ss_pred cceEEEEEEecCceEEEEEEEECCC
Confidence 6678999999999999999999754
No 178
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=37.10 E-value=21 Score=34.92 Aligned_cols=43 Identities=12% Similarity=0.058 Sum_probs=27.9
Q ss_pred cCCceeeeecchhHHHHHhhhcc-CccceEEEEEEeCCCeEEEEEE
Q psy8852 287 AGLNVLRLLNEPTSAAIAYKLDK-NIFEGIFAVYDLGGGTFDISIL 331 (634)
Q Consensus 287 aGl~~~~li~Ep~AAa~~y~~~~-~~~~~~vlV~D~GggT~dvsv~ 331 (634)
.|++ +.+.++..|||++-.... ....++++++-+|-| .-.+++
T Consensus 97 ~~~p-V~v~NDanaaalaE~~~G~~~~~~~~~~l~~GtG-iG~gii 140 (302)
T 3epq_A 97 MXIP-VGFSTDVNAAALGEFLFGEAXGLDSCLYITIGTG-IGAGAI 140 (302)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEE
Confidence 3776 689999999999754432 223456778888876 334443
No 179
>1msz_A DNA-binding protein smubp-2; R3H fold; NMR {Homo sapiens} SCOP: d.68.7.1
Probab=36.87 E-value=28 Score=26.96 Aligned_cols=28 Identities=21% Similarity=0.251 Sum_probs=25.6
Q ss_pred EEEEeCCCCCHHHHHHHHHHHHHcCCce
Q psy8852 264 AVITVPAYFNDIQRQFTKNAAKLAGLNV 291 (634)
Q Consensus 264 ~viTVPa~~~~~qr~~l~~aa~~aGl~~ 291 (634)
-.++.|+.++..+|..+.+.|+..||..
T Consensus 34 ~~l~FP~sLs~~eR~~IH~lA~~~GL~h 61 (86)
T 1msz_A 34 MQLEFPPSLNSHDRLRVHQIAEEHGLRH 61 (86)
T ss_dssp SEEEECTTCCSHHHHHHHHHHHHTTEEE
T ss_pred cEEEcCCCCCHHHHHHHHHHHHHcCCCc
Confidence 4788999999999999999999999854
No 180
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=35.86 E-value=15 Score=35.73 Aligned_cols=60 Identities=13% Similarity=-0.015 Sum_probs=35.9
Q ss_pred CcCcEEEEeCCCCCHHHHHHHHHHHHH-cCC-ceeeeecchhHHHHHhhhccCccceEEEEEEeCCCe
Q psy8852 260 RIFGAVITVPAYFNDIQRQFTKNAAKL-AGL-NVLRLLNEPTSAAIAYKLDKNIFEGIFAVYDLGGGT 325 (634)
Q Consensus 260 ~~~~~viTVPa~~~~~qr~~l~~aa~~-aGl-~~~~li~Ep~AAa~~y~~~~~~~~~~vlV~D~GggT 325 (634)
.+..+.|++|..- ......+++..+. .++ ..+.+.++..||+++-. . . ...+++=+|-|.
T Consensus 59 ~i~~igig~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aa~ge~---g-~-~~~v~v~~GTGi 120 (291)
T 1zbs_A 59 SIRAVYFYGAGCT-PAKAPMLNEALDSMLPHCDRIEVAGDMLGAARALC---G-D-SEGIACILGTGS 120 (291)
T ss_dssp TCCEEEEEETTCC-TTTHHHHHHHHHHHSTTCSEEEEECHHHHHHHHHT---T-T-SCEEEEEESSSE
T ss_pred cccEEEEECCCCC-hHHHHHHHHHHHHhcCCCCcEEEeCcHHHHHHhhc---C-C-CCcEEEEecCCh
Confidence 4667889999764 2222345544443 455 46889999999998742 1 1 223444467665
No 181
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=35.53 E-value=46 Score=32.55 Aligned_cols=50 Identities=10% Similarity=0.135 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhhccCC
Q psy8852 420 ITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKTT 472 (634)
Q Consensus 420 ~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~ 472 (634)
+.+...+.+...++++|++++++.++|++|+.-|++.++ -+.+.+.||.+
T Consensus 212 ~~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~---~d~i~~~lg~~ 261 (317)
T 1hnj_A 212 VFKVAVTELAHIVDETLAANNLDRSQLDWLVPHQANLRI---ISATAKKLGMS 261 (317)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEECCSCHHH---HHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcCCC
Confidence 444456677888999999999999999999999987764 45677888753
No 182
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=35.34 E-value=15 Score=35.75 Aligned_cols=46 Identities=11% Similarity=-0.033 Sum_probs=28.9
Q ss_pred CCCeEEEEcCCcCcHHHHHHHHhhccCCcCCCCChhhHHHHHHHHHHh
Q psy8852 445 DINNVILVGGSTRMKHIHEGVSNFFKTTLLTSIDPDKAVVFGAAIQAN 492 (634)
Q Consensus 445 ~i~~ViLvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~ 492 (634)
+...|+|.||.+.. +.+.|++.+..+......+..+.+.||++++.
T Consensus 232 ~p~~vvlgGGv~~~--l~~~l~~~l~~~~~~i~~~~~a~~~GAa~la~ 277 (291)
T 1zxo_A 232 KQYPVHFIGSIAYC--YKEILQDAARQTGIQIGKILQSPMEGLIQYHS 277 (291)
T ss_dssp TTSCEEECSHHHHH--THHHHHHHTTTTTCCEEEECSCTHHHHHTTSS
T ss_pred CCceEEEECcHHHH--HHHHHHHHHhcCCcEEeecCCCHHHHHHHHHH
Confidence 56789999998765 55666665543211111234677899998764
No 183
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=34.28 E-value=84 Score=30.52 Aligned_cols=22 Identities=27% Similarity=0.336 Sum_probs=19.3
Q ss_pred ceEEEEEeCCceEEEEEEE-CCe
Q psy8852 133 CVSIGIDFGTTNSLVAIVR-NNI 154 (634)
Q Consensus 133 ~~vvGID~GTt~s~va~~~-~g~ 154 (634)
.+++|||+|.|++++++.+ +|+
T Consensus 3 ~~~lgiDiGgt~i~~~l~d~~G~ 25 (302)
T 3epq_A 3 AMLGGIEAGGTXFVCAVGREDGT 25 (302)
T ss_dssp CCEEEEEECSSEEEEEEECTTSC
T ss_pred cEEEEEEECcceeEEEEEECCCc
Confidence 5789999999999999988 565
No 184
>1xs0_A Inhibitor of vertebrate lysozyme; alpha beta fold, dimer, hydrolase inhibitor; 1.58A {Escherichia coli} SCOP: d.233.1.1 PDB: 1gpq_A
Probab=32.94 E-value=21 Score=30.25 Aligned_cols=37 Identities=22% Similarity=0.264 Sum_probs=32.0
Q ss_pred ccccCCCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCC
Q psy8852 5 FDFFNLPKCFNIDMDLLDKIYYNFQKKIHPDNFIQKS 41 (634)
Q Consensus 5 ~~~l~~~~~~~~~~~~i~~~y~~~~~~~HPD~~~~~~ 41 (634)
|.-||.|-..+||=..|-.|+..-|+..|||.|.-++
T Consensus 94 ~~WLG~Pd~~sidg~t~l~a~lt~sl~nhP~~f~~~~ 130 (136)
T 1xs0_A 94 LTWLNVNDALSIDGKTVLFAALTGSLENHPDGFNFRS 130 (136)
T ss_dssp EEEECSSCCCCHHHHHHHHHHHHTHHHHSTTSCCEEC
T ss_pred eEecCCCChhhcccHHHHHHHHhcchhcCcccccccc
Confidence 5678998888899999999999999999999987544
No 185
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=32.76 E-value=1.5e+02 Score=32.22 Aligned_cols=97 Identities=11% Similarity=0.115 Sum_probs=63.0
Q ss_pred eEEEEEEeCCCeEEEEEEEEeCCeEEEEEEcCCC--CccchhHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHhc
Q psy8852 314 GIFAVYDLGGGTFDISILKFKNGVFKVLSVGGDS--NLGGDDFDYCLFSWIVKNAFLKKLSYKDVNILMIKSREIKELLS 391 (634)
Q Consensus 314 ~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~--~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls 391 (634)
.+=+.+|+|.+|+-..++.+..+..--.....+. ..|.+-+++.-+. .+
T Consensus 206 ~~GlAvDiGTTtv~~~LvdL~tG~~l~~~~~~NpQ~~~G~DVisRI~~a--~~--------------------------- 256 (631)
T 3zyy_X 206 VFGLAIDIGTTTVVVQLVDLVSGKVLGTKGNYNKQAAFGDDVISRIIYV--DE--------------------------- 256 (631)
T ss_dssp CEEEEEEECSSEEEEEEEETTTCCEEEEEEEECGGGGTCSSHHHHHHHH--HH---------------------------
T ss_pred ceEEEEEecccceeEEEEECCCCCEEEeecccCCCCCcchHHHHHHHHH--hc---------------------------
Confidence 3558999999999999999887764333333333 3455554444321 00
Q ss_pred CCcceEEEEEecCCceeEEEEeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHH
Q psy8852 392 YQSSVKLNVKLSDKKIVNITIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKH 460 (634)
Q Consensus 392 ~~~~~~i~i~~~~g~~~~~~itr~~~e~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~ 460 (634)
...-.+++-+-+++.+..++.+.+++++++.++|..+.++|-++-...
T Consensus 257 ---------------------~~~g~~~L~~~v~~~in~li~~l~~~~~i~~~~I~~~~v~GNt~M~hL 304 (631)
T 3zyy_X 257 ---------------------NPDGAEKLRKAVLSTINELIFQLCKEHGVEKKEIMAAVVAGNTTMTHL 304 (631)
T ss_dssp ---------------------CTTHHHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEEECHHHHHH
T ss_pred ---------------------CcccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHeeEEEEEccHHHHHH
Confidence 001233344455677778888888899999999999999996654333
No 186
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=31.81 E-value=38 Score=32.61 Aligned_cols=23 Identities=9% Similarity=0.151 Sum_probs=19.5
Q ss_pred CceEEEEEeCCceEEEEEEE-CCe
Q psy8852 132 KCVSIGIDFGTTNSLVAIVR-NNI 154 (634)
Q Consensus 132 ~~~vvGID~GTt~s~va~~~-~g~ 154 (634)
..+.+.||.|+|++++++++ +++
T Consensus 22 ~~M~L~IDiGNT~ik~g~~~~~~~ 45 (271)
T 2f9w_A 22 ASMILELDCGNSLIKWRVIEGAAR 45 (271)
T ss_dssp -CEEEEEEECSSCEEEEEEETTTE
T ss_pred cCcEEEEEeCCCeeEEEEEeCCCE
Confidence 35789999999999999998 664
No 187
>4h0o_A Acetate kinase; askha (acetate and S kinase, HSC70, actin) superfamily, ribonuclease H-like fold transferase; 2.40A {Entamoeba histolytica}
Probab=29.95 E-value=2.7e+02 Score=28.16 Aligned_cols=44 Identities=0% Similarity=0.125 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCc-CcHHHHHHHHhhc
Q psy8852 422 QHLVNRTILLSSKALMDANLTIKDINNVILVGGST-RMKHIHEGVSNFF 469 (634)
Q Consensus 422 ~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s-~~p~v~~~l~~~f 469 (634)
+-++.++.+.|-......+ .+|.|+++||-+ ..+.+++.+.+.+
T Consensus 307 d~f~yri~k~IGa~aa~L~----GvDaIVFTgGIGEns~~vR~~i~~~l 351 (404)
T 4h0o_A 307 DVYIKQLAKTIGGLMVEIG----GLDLLVFTDQMGLEVWQVRKAICDKM 351 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHT----CCSEEEEEHHHHHHCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHhc----CCCEEEECCccccCcHHHHHHHHhhh
Confidence 3344444444443333322 389999999974 7799999988765
No 188
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=29.70 E-value=96 Score=33.66 Aligned_cols=63 Identities=16% Similarity=0.270 Sum_probs=47.5
Q ss_pred eeEEEEeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHH-hhcc
Q psy8852 407 IVNITIDMKQFFTITQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVS-NFFK 470 (634)
Q Consensus 407 ~~~~~itr~~~e~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~-~~f~ 470 (634)
.-.+.||..+++++... -..+..-++..|++++++..+|+.|+|.||++.-=-+.+.+. -+++
T Consensus 497 ~~~i~itq~DIr~~qlA-KaAi~agi~~Ll~~~gi~~~di~~v~lAGaFG~~l~~~~a~~iGllP 560 (631)
T 3zyy_X 497 NKDIVITEADIQNLIRA-KAAIFAGVRTMLAMVDLPLEAIDRVIIAGGFGKYLNIKDAITIGLLP 560 (631)
T ss_dssp SSCEEEEHHHHHHHHHH-HHHHHHHHHHHHHHTTCCGGGCCEEEEESSSCSEEEHHHHHHHTSSC
T ss_pred CCcEEEeHHHHHHHHHH-HHHHHHHHHHHHHHcCCCHHHccEEEEeccccccCCHHHHhhcCCCC
Confidence 34588999999976532 344566777888999999999999999999988666666554 3444
No 189
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=28.45 E-value=62 Score=31.64 Aligned_cols=47 Identities=17% Similarity=0.127 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhhccC
Q psy8852 422 QHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKT 471 (634)
Q Consensus 422 ~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~ 471 (634)
+-....+...++++|++++++.++|+.|+.-|++.++ -+.+.+.||.
T Consensus 216 ~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~d~~~~~lg~ 262 (322)
T 1ub7_A 216 KFAVRVMNTATLEAIEKAGLTPEDIRLFVPHQANLRI---IDAARERLGL 262 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcCC
Confidence 3445677788999999999999999999999987664 3457777875
No 190
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=27.70 E-value=69 Score=31.02 Aligned_cols=46 Identities=13% Similarity=0.142 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhhccC
Q psy8852 423 HLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKT 471 (634)
Q Consensus 423 ~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~ 471 (634)
.........++++|++++++.++|+.|++-|+++++ -+.+.+.||.
T Consensus 207 ~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~~~~~~~lg~ 252 (309)
T 2ebd_A 207 VAVRSMEEVCREVLEKAGVKPEEVSLVIPHQANVRI---INALAEKLNI 252 (309)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHhCC
Confidence 445567788999999999999999999999988764 3457777765
No 191
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=27.65 E-value=57 Score=33.02 Aligned_cols=21 Identities=19% Similarity=0.333 Sum_probs=18.7
Q ss_pred ceEEEEEeCCceEEEEEEECC
Q psy8852 133 CVSIGIDFGTTNSLVAIVRNN 153 (634)
Q Consensus 133 ~~vvGID~GTt~s~va~~~~g 153 (634)
+.++|||+|.|++++++++.+
T Consensus 2 ~~vlgidiGgt~ik~al~d~~ 22 (381)
T 1saz_A 2 FRILTINPGSTSTKLSIFEDE 22 (381)
T ss_dssp CEEEEEEECSSEEEEEEEETT
T ss_pred CeEEEEECCccceeEEEEecc
Confidence 468999999999999999865
No 192
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=26.95 E-value=3.9e+02 Score=26.31 Aligned_cols=75 Identities=17% Similarity=0.225 Sum_probs=48.1
Q ss_pred cceEEEEEEeCCCeEEEEEEEEe-CCeEEEEEEc-CCCCccchhHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHH
Q psy8852 312 FEGIFAVYDLGGGTFDISILKFK-NGVFKVLSVG-GDSNLGGDDFDYCLFSWIVKNAFLKKLSYKDVNILMIKSREIKEL 389 (634)
Q Consensus 312 ~~~~vlV~D~GggT~dvsv~~~~-~~~~~v~~~~-~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~L~~~~e~~K~~ 389 (634)
....+.++|+|..++-+.|+++. ++.+.++... ....+|- .++. ...+++..+.+......+.|..
T Consensus 14 ~~~~~A~IDiGSNsiRL~I~~~~~~~~~~~i~~~k~~vrLg~-g~~~-----------~g~ls~eai~r~~~aL~~f~~~ 81 (343)
T 3cer_A 14 ESVTVAGIDCGTNSIRLKIARVDADGMHEVVPRILRVIRLGQ-DVDK-----------THRFADEALERAYVAAREFAGV 81 (343)
T ss_dssp CCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEEECCCTTT-THHH-----------HSSCCHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEcccceeEeEEEEEcCCCCEEEEEEEEEEeeCCC-Cccc-----------cCCcCHHHHHHHHHHHHHHHHH
Confidence 44679999999999999999998 4556655443 2234442 2321 1124567777777777777777
Q ss_pred hcCCcceEE
Q psy8852 390 LSYQSSVKL 398 (634)
Q Consensus 390 Ls~~~~~~i 398 (634)
+....-..+
T Consensus 82 ~~~~~v~~v 90 (343)
T 3cer_A 82 IAEHPIDGL 90 (343)
T ss_dssp HTTSCCSEE
T ss_pred HHHCCCCeE
Confidence 755443333
No 193
>3nuw_A 2-OXO-3-deoxygalactonate kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.09A {Klebsiella pneumoniae} PDB: 3r1x_A*
Probab=26.60 E-value=52 Score=31.97 Aligned_cols=45 Identities=18% Similarity=0.200 Sum_probs=33.2
Q ss_pred CeEEEEcCCcCcHHHHHHHHhhccCCcCCCCChhhHHHHHHHHHHhH
Q psy8852 447 NNVILVGGSTRMKHIHEGVSNFFKTTLLTSIDPDKAVVFGAAIQANF 493 (634)
Q Consensus 447 ~~ViLvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~ava~GAa~~a~~ 493 (634)
..|.|+|........+..|+. +|.++. ..+++.++..|....+..
T Consensus 248 ~~v~LiG~~~L~~~Y~~AL~~-~G~~~~-~~d~~~~~~~GL~~~~~~ 292 (295)
T 3nuw_A 248 QAISLVAGSSLTSRYQQAFAA-IGREVS-AVAGDTAFQTGIRSIAYA 292 (295)
T ss_dssp SCEEEEECHHHHHHHHHHHHH-TTCCEE-EEEHHHHHHHHHHHHHHH
T ss_pred CeEEEEeCHHHHHHHHHHHHH-cCCCce-ecCHHHHHHHHHHHHHHH
Confidence 569999999888888888864 576542 347888888887755543
No 194
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=26.22 E-value=69 Score=34.03 Aligned_cols=31 Identities=19% Similarity=0.089 Sum_probs=26.4
Q ss_pred CcCcEEEEeCCCCCHHHHHHHHHHHHHcCCc
Q psy8852 260 RIFGAVITVPAYFNDIQRQFTKNAAKLAGLN 290 (634)
Q Consensus 260 ~~~~~viTVPa~~~~~qr~~l~~aa~~aGl~ 290 (634)
.-..+++.||..++...-.++.+++...|++
T Consensus 127 ~~~~~i~~~~~~~df~~~a~~in~~~~~g~~ 157 (610)
T 2d0o_A 127 ADAPYILVVSSAFDFADIASVINASLRAGYQ 157 (610)
T ss_dssp TTSEEEEEECTTSCHHHHHHHHHHHHHTTCE
T ss_pred CCCcEEEEECCcCCHHHHHHHHHHHHHCCCc
Confidence 4456999999999999999999988888874
No 195
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=25.48 E-value=33 Score=37.24 Aligned_cols=48 Identities=19% Similarity=0.284 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHHHHcCCCc--CCCCeEEEEcCCcCcHHHHHHHHhhcc
Q psy8852 423 HLVNRTILLSSKALMDANLTI--KDINNVILVGGSTRMKHIHEGVSNFFK 470 (634)
Q Consensus 423 ~~~~~~~~~i~~~l~~~~~~~--~~i~~ViLvGG~s~~p~v~~~l~~~f~ 470 (634)
|+=+.|++-|..+......++ .=.+.|++|||+|.+|.+.-.|.+...
T Consensus 476 pLdkAIi~SIt~a~~~~d~~k~~~~y~nilivGggski~g~~~~L~dri~ 525 (655)
T 4am6_A 476 PLEKAIVQSIANASITADVTRMNSFYSNILIVGGSSKIPALDFILTDRIN 525 (655)
T ss_dssp CHHHHHHHHHHHHHHTSCGGGHHHHHTCEEEESTTCCCTTHHHHHHHHHH
T ss_pred cHHHHHHHHHHhhhccccHHHHHHHhhcEEEEcCcccCccHHHHHHHHHH
Confidence 344445555554443222221 113789999999999999999988874
No 196
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=25.44 E-value=90 Score=30.75 Aligned_cols=46 Identities=17% Similarity=0.172 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhhccC
Q psy8852 423 HLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKT 471 (634)
Q Consensus 423 ~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~ 471 (634)
-........++++|++++++.++|++|+.-|++.++ -+.+.+.||.
T Consensus 228 ~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~---~d~i~~~lg~ 273 (339)
T 1mzj_A 228 WAVADVVPAAREALEVAGLTVGDLVAFVPHQANLRI---IDVLVDRLGV 273 (339)
T ss_dssp HHHHHHHHHHHHHHHTTTCCGGGCSEEEECCSCHHH---HHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHH---HHHHHHHhCC
Confidence 345677788999999999999999999999887763 3456677764
No 197
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=24.77 E-value=1.7e+02 Score=30.24 Aligned_cols=30 Identities=30% Similarity=0.605 Sum_probs=24.9
Q ss_pred cceEEEEEEeCCCeEEEEEEEEeCCeEEEEE
Q psy8852 312 FEGIFAVYDLGGGTFDISILKFKNGVFKVLS 342 (634)
Q Consensus 312 ~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~ 342 (634)
+.+.+|.+|+||.++-+.++++.++ +++..
T Consensus 57 E~G~~LAlDlGGTn~RV~~V~l~g~-~~~~~ 86 (445)
T 3hm8_A 57 ERGDFLALDLGGTNFRVLLVRVTTG-VQITS 86 (445)
T ss_dssp CCEEEEEEEESSSSEEEEEEEESSS-EEEEE
T ss_pred eeeEEEEEEecCCeEEEEEEEECCc-eEEEE
Confidence 6678999999999999999999766 44443
No 198
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=24.70 E-value=3.7e+02 Score=26.08 Aligned_cols=68 Identities=18% Similarity=0.232 Sum_probs=42.2
Q ss_pred ceEEEEEEeCCCeEEEEEEEEeCCeEEEEEEc-CCCCccchhHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHhc
Q psy8852 313 EGIFAVYDLGGGTFDISILKFKNGVFKVLSVG-GDSNLGGDDFDYCLFSWIVKNAFLKKLSYKDVNILMIKSREIKELLS 391 (634)
Q Consensus 313 ~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~-~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls 391 (634)
...+.++|+|..++-+.|+++.++.+.++... ....+| ..++. ...+++..+.+......+.|..+.
T Consensus 11 ~m~~a~IDiGSns~rl~I~~~~~~~~~~i~~~k~~vrLg-~g~~~-----------~g~ls~eai~r~~~~L~~f~~~~~ 78 (315)
T 1t6c_A 11 IMRVASIDIGSYSVRLTIAQIKDGKLSIILERGRITSLG-TKVKE-----------TGRLQEDRIEETIQVLKEYKKLID 78 (315)
T ss_dssp CEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEEECCTT-TTHHH-----------HSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEEECcCcEEEEEEEEcCCcEEEEeeeeEEeecC-CCccc-----------cCCcCHHHHHHHHHHHHHHHHHHH
Confidence 35789999999999999999988766655432 223444 22321 111345556666666666665554
Q ss_pred C
Q psy8852 392 Y 392 (634)
Q Consensus 392 ~ 392 (634)
.
T Consensus 79 ~ 79 (315)
T 1t6c_A 79 E 79 (315)
T ss_dssp H
T ss_pred H
Confidence 3
No 199
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=24.17 E-value=1.8e+02 Score=30.17 Aligned_cols=24 Identities=25% Similarity=0.508 Sum_probs=21.8
Q ss_pred cceEEEEEEeCCCeEEEEEEEEeC
Q psy8852 312 FEGIFAVYDLGGGTFDISILKFKN 335 (634)
Q Consensus 312 ~~~~vlV~D~GggT~dvsv~~~~~ 335 (634)
+.+.++.+|+||+++-+.+++..+
T Consensus 66 E~G~~lalDlGGTn~Rv~~V~l~G 89 (451)
T 1bdg_A 66 ETGNFLALDLGGTNYRVLSVTLEG 89 (451)
T ss_dssp CCEEEEEEEESSSSEEEEEEEECC
T ss_pred ccceEEEEEeCCCeEEEEEEecCC
Confidence 567899999999999999999976
No 200
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=23.98 E-value=96 Score=30.02 Aligned_cols=48 Identities=23% Similarity=0.158 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcCCCCeEEEEcCCcCcHHHHHHHHhhccC
Q psy8852 421 TQHLVNRTILLSSKALMDANLTIKDINNVILVGGSTRMKHIHEGVSNFFKT 471 (634)
Q Consensus 421 ~~~~~~~~~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~ 471 (634)
.+.....+...++++|++++++.++|+.|++-+++.++ -+.+.+.||.
T Consensus 207 ~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~d~~~~~lg~ 254 (313)
T 1zow_A 207 FKFAVRIMGDASTRVVEKANLTSDDIDLFIPHQANIRI---MESARERLGI 254 (313)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHH---HHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHhCC
Confidence 33455677888999999999999999999999887653 3446667764
No 201
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=22.17 E-value=4.2e+02 Score=25.63 Aligned_cols=30 Identities=27% Similarity=0.299 Sum_probs=25.6
Q ss_pred eEEEEEEeCCCeEEEEEEEEeCCeEEEEEE
Q psy8852 314 GIFAVYDLGGGTFDISILKFKNGVFKVLSV 343 (634)
Q Consensus 314 ~~vlV~D~GggT~dvsv~~~~~~~~~v~~~ 343 (634)
..+.++|+|.-++-+.|+++.++.+.++..
T Consensus 4 ~~~A~IDiGSNsirL~I~~~~~~~~~~i~~ 33 (315)
T 3mdq_A 4 QRIGVIDMGTNTFHLLITDIVNDRPHTLVN 33 (315)
T ss_dssp CEEEEEEECSSEEEEEEEEEETTEEEEEEE
T ss_pred ceEEEEEecCCcEEEEEEEEcCCceEEeee
Confidence 468999999999999999998887766654
No 202
>3fcg_A F1 capsule-anchoring protein; beta barrel, beta strand swapping, cell membrane, cell outer membrane, cell projection, fimbrium, membrane; 2.85A {Yersinia pestis}
Probab=21.24 E-value=2.5e+02 Score=21.79 Aligned_cols=55 Identities=20% Similarity=0.282 Sum_probs=32.0
Q ss_pred EEEEEEecCccccccCceeeEEEEeCCCCCCCCccEEEEEEEECCCeeEEEEEEEecCCeEEEEEEecC
Q psy8852 551 IAIKVVQGEDELVKNCQVLANFELRDIPPMPAGRARIKVTYQVDADGLLSIFAYEKISGKKKFITIKPF 619 (634)
Q Consensus 551 ~~i~i~~g~~~~~~~~~~lg~~~l~~~~~~~~g~~~i~v~~~~d~~g~l~v~~~~~~~g~~~~~~i~~~ 619 (634)
-.+.|+|.....-.....-|-|.|.+++.. ...|.|.|++.|. .|.+...++-.+
T Consensus 27 A~V~v~qnG~~iy~~~VppGpF~I~dl~~~-------------~~~Gdl~V~v~ea-dG~~~~~~vp~~ 81 (90)
T 3fcg_A 27 ARVEVLRDGYTVSNELVPSGPFELANLPLG-------------GGSGELKVIIHES-DGTKQVFTVPYD 81 (90)
T ss_dssp EEEEEESSSCEEEEEEECSEEEEECCCC----------------CCEEEEEEEECT-TSCEEEEEEEEC
T ss_pred cEEEEEECCEEEEEeEeCCCCeEEcCCccc-------------CCceeEEEEEEEC-CCCEEEEEECcc
Confidence 345555544333333344578888777652 2367788888774 577777776443
No 203
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=20.62 E-value=1.2e+02 Score=29.87 Aligned_cols=39 Identities=15% Similarity=0.222 Sum_probs=16.8
Q ss_pred eEEEEEeCCceEEEEEEE-CCe--eEE--EecCCCCccccEEEE
Q psy8852 134 VSIGIDFGTTNSLVAIVR-NNI--PEV--LKDKYGYFLIPSIVR 172 (634)
Q Consensus 134 ~vvGID~GTt~s~va~~~-~g~--~~v--i~~~~g~~~~Ps~v~ 172 (634)
+++|+|+|..|++++... +|. +.. ++.|.|....+..+.
T Consensus 1 ~iiG~DIGGAn~K~a~~~~~g~~~~~~~~~PlW~~~~~L~~~l~ 44 (334)
T 3cet_A 1 MILGIDIGGANTKITELHENGEFKVHHLYFPMWKNNDKLAEVLK 44 (334)
T ss_dssp CEEEEEEC--CEEEEEECSTTCCEEEEC----------------
T ss_pred CeeEEEecccceeeeeecCCCceEEEEEecCCcCCchHHHHHHH
Confidence 479999999999999876 665 322 246777555665554
Done!