BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8853
(242 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A4G2N0|Y561_HERAR Probable transcriptional regulatory protein HEAR0561
OS=Herminiimonas arsenicoxydans GN=HEAR0561 PE=3 SV=1
Length = 242
Score = 272 bits (696), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 124/241 (51%), Positives = 175/241 (72%), Gaps = 3/241 (1%)
Query: 1 MAGHSKWANIKRKKLIVDAKRGKICTRIMRELRVAINFGNNP-DTNIKLRLAIEKALDAN 59
MAGHSKWANI+ +K D KRGKI TR+++E+ VA G N +LRLA++KA DAN
Sbjct: 1 MAGHSKWANIQHRKGRQDEKRGKIWTRLIKEITVAARMGGGDIAANPRLRLAVDKAADAN 60
Query: 60 IPKNNIFRAIQKNNSNIKNENINYIEVRYEGYSVNGAAIIVDCITNNRMRTVSNIRNIFN 119
+PK+N+ RAIQ+ + + E +NY E+RYEGY +NGAAI+VDC+T+NR+RTV+ +R+ F+
Sbjct: 61 MPKDNVTRAIQRGSGGL--EGVNYEEIRYEGYGINGAAILVDCMTDNRVRTVAEVRHAFS 118
Query: 120 KNGGNLSKEGSVLFMFKHCGQLLFLPNTKKNTLLDLALEKGAEDFLIDKDNKITIITSPS 179
K GGN+ EGSV F+FKHCGQ F P T ++ L++ ALE GAED D++ I +I P
Sbjct: 119 KFGGNMGTEGSVAFLFKHCGQFFFAPGTDEDKLMEAALEAGAEDVTTDEEGGIEVICPPH 178
Query: 180 KFIEIKNSLEMTGFKAESSGIVMRPYTNIVFKDGEAIKLQKLLNELKKLHDVKKVYTNAL 239
F +K++L GFKAE + +VM+P T VF+ +A+K+QKLL+ L+ L DV++V+TNA+
Sbjct: 179 DFSAVKDALAAAGFKAELAEVVMKPATETVFEGDDAVKMQKLLDALENLDDVQEVFTNAV 238
Query: 240 I 240
I
Sbjct: 239 I 239
>sp|A6SVD7|Y544_JANMA Probable transcriptional regulatory protein mma_0544
OS=Janthinobacterium sp. (strain Marseille) GN=mma_0544
PE=3 SV=1
Length = 241
Score = 271 bits (694), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 123/241 (51%), Positives = 174/241 (72%), Gaps = 3/241 (1%)
Query: 1 MAGHSKWANIKRKKLIVDAKRGKICTRIMRELRVAINFGNNP-DTNIKLRLAIEKALDAN 59
MAGHSKWANI+ +K D +RGKI TR+++E+ VA G N +LRLA++KA DAN
Sbjct: 1 MAGHSKWANIQHRKGRQDERRGKIWTRLIKEITVAARMGGGDVAANPRLRLAVDKAADAN 60
Query: 60 IPKNNIFRAIQKNNSNIKNENINYIEVRYEGYSVNGAAIIVDCITNNRMRTVSNIRNIFN 119
+PK+N+ RAIQ+ + + E +NY E+RYEGY +NGAA++VDC+T+NR+RTV+ +R+ F
Sbjct: 61 MPKDNVTRAIQRGSGGL--EGVNYEEIRYEGYGINGAAVLVDCMTDNRVRTVAEVRHAFA 118
Query: 120 KNGGNLSKEGSVLFMFKHCGQLLFLPNTKKNTLLDLALEKGAEDFLIDKDNKITIITSPS 179
K GGN+ EGSV FMFKHCGQ F P T ++ L++ ALE GA+D D++ I +I P
Sbjct: 119 KFGGNMGTEGSVAFMFKHCGQFFFAPGTDEDKLMEAALEAGADDVTTDEEGGIEVICPPH 178
Query: 180 KFIEIKNSLEMTGFKAESSGIVMRPYTNIVFKDGEAIKLQKLLNELKKLHDVKKVYTNAL 239
F +K++L GFKAE + +VM+P T VF+ +AIK+QKLL+ L+ L DV+++YTNA+
Sbjct: 179 DFSAVKDALTAAGFKAELAEVVMKPATETVFQGDDAIKMQKLLDALENLDDVQEIYTNAV 238
Query: 240 I 240
I
Sbjct: 239 I 239
>sp|Q2Y5G2|Y2722_NITMU Probable transcriptional regulatory protein Nmul_A2722
OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB
11849) GN=Nmul_A2722 PE=3 SV=1
Length = 240
Score = 271 bits (692), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 121/241 (50%), Positives = 178/241 (73%), Gaps = 3/241 (1%)
Query: 1 MAGHSKWANIKRKKLIVDAKRGKICTRIMRELRVAINFGN-NPDTNIKLRLAIEKALDAN 59
MAGHSKWANIK KK DAKRGKI TR+++E+ VA G +P++N +LRLA++KA + N
Sbjct: 1 MAGHSKWANIKHKKAAQDAKRGKIFTRLIKEITVAARLGGGDPNSNPRLRLAVDKAYEQN 60
Query: 60 IPKNNIFRAIQKNNSNIKNENINYIEVRYEGYSVNGAAIIVDCITNNRMRTVSNIRNIFN 119
+PK N+ RAI++ + ++ E +NY E+RYEGY + GAA++VDC+T+NR+RTV+++R+ F
Sbjct: 61 MPKENVERAIKRGSGDL--EGVNYEEIRYEGYGIAGAAVLVDCMTDNRVRTVADVRHAFT 118
Query: 120 KNGGNLSKEGSVLFMFKHCGQLLFLPNTKKNTLLDLALEKGAEDFLIDKDNKITIITSPS 179
K GGNL +GSV F+FKHCGQLLF P T ++ L+++ALE GAED + D I +IT+P
Sbjct: 119 KYGGNLGTDGSVGFLFKHCGQLLFAPGTDEDKLMEVALEAGAEDIIAHDDGSIEVITAPY 178
Query: 180 KFIEIKNSLEMTGFKAESSGIVMRPYTNIVFKDGEAIKLQKLLNELKKLHDVKKVYTNAL 239
+F+ +K +LE GFKAE + + M+P +++K+QKLL+ L+ + DV++VYT A+
Sbjct: 179 EFVAVKEALEKAGFKAELAEVTMKPVNETELTGDDSVKMQKLLDALESIDDVQEVYTTAV 238
Query: 240 I 240
I
Sbjct: 239 I 239
>sp|A9ITM2|Y3099_BORPD Probable transcriptional regulatory protein Bpet3099 OS=Bordetella
petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448)
GN=Bpet3099 PE=3 SV=1
Length = 243
Score = 270 bits (691), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 123/243 (50%), Positives = 171/243 (70%), Gaps = 4/243 (1%)
Query: 1 MAGHSKWANIKRKKLIVDAKRGKICTRIMRELRVAINFGN-NPDTNIKLRLAIEKALDAN 59
MAGHSKWANI+ +K DAKRGK+ T+I+RE+ VA G +PD+N +LR+A +KA DAN
Sbjct: 1 MAGHSKWANIQHRKGRQDAKRGKLWTKIIREITVAARAGGPDPDSNPRLRMAWDKATDAN 60
Query: 60 IPKNNIFRAIQKNNSNIKNENINYIEVRYEGYSVNGAAIIVDCITNNRMRTVSNIRNIFN 119
+PK+NI RAIQ+ + NY EVRYEGY + GAA+IVDC+T+NR RTV+ +R+ F
Sbjct: 61 MPKDNIQRAIQRGAGGA--DGANYEEVRYEGYGIGGAAVIVDCMTDNRTRTVAEVRHAFA 118
Query: 120 KNGGNLSKEGSVLFMFKHCGQLLFLPNTKKNTLLDLALEKGAEDFLIDKDNKITIITSPS 179
KNGGNL +EGSV FMFKHCGQ +F P T ++ +++ ALE GAED D + I +I +P+
Sbjct: 119 KNGGNLGQEGSVAFMFKHCGQFVFAPGTAEDVVMEAALEAGAEDVTTDDEGVIEVICAPA 178
Query: 180 KFIEIKNSLEMTGFKAESSGIVMRPYTNIVFKDGEAIKLQKLLNELKKLHDVKKVYTNAL 239
+ ++ + E G KAE GI+M+P +A+K+QKLL+ L+ L DV++VYT +
Sbjct: 179 DYAAVRQAFEAAGLKAEVEGIIMKPQNETELTGEDAVKMQKLLDALEGLDDVQEVYTT-V 237
Query: 240 IFD 242
+FD
Sbjct: 238 VFD 240
>sp|Q7VWE9|Y2308_BORPE Probable transcriptional regulatory protein BP2308 OS=Bordetella
pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)
GN=BP2308 PE=3 SV=1
Length = 243
Score = 270 bits (690), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 123/243 (50%), Positives = 172/243 (70%), Gaps = 4/243 (1%)
Query: 1 MAGHSKWANIKRKKLIVDAKRGKICTRIMRELRVAINFGN-NPDTNIKLRLAIEKALDAN 59
MAGHSKWANI+ +K DAKRGK+ T+I+RE+ VA G +PD+N +LR+A +KA DAN
Sbjct: 1 MAGHSKWANIQHRKGRQDAKRGKLWTKIIREITVAARAGGADPDSNPRLRMAWDKATDAN 60
Query: 60 IPKNNIFRAIQKNNSNIKNENINYIEVRYEGYSVNGAAIIVDCITNNRMRTVSNIRNIFN 119
+PK+NI RAIQ+ E+ Y EVRYEGY + GAA+IVDC+T+NR RTV+ +R+ F
Sbjct: 61 MPKDNIQRAIQRGAGGADGES--YEEVRYEGYGIGGAAVIVDCMTDNRTRTVAEVRHAFA 118
Query: 120 KNGGNLSKEGSVLFMFKHCGQLLFLPNTKKNTLLDLALEKGAEDFLIDKDNKITIITSPS 179
K+GGNL +EGSV FMFKHCGQ +F P T + T+++ ALE GAED D++ I ++ +P+
Sbjct: 119 KHGGNLGQEGSVAFMFKHCGQFVFAPGTSEETVMEAALEAGAEDVATDEEGVIEVVCAPA 178
Query: 180 KFIEIKNSLEMTGFKAESSGIVMRPYTNIVFKDGEAIKLQKLLNELKKLHDVKKVYTNAL 239
F ++ + E G KAE G+VM+ +A+K+QKLL+ L+ L DV++VYTN +
Sbjct: 179 DFTAVRQAFEAAGLKAEVDGVVMKALNETELTGEDAVKMQKLLDVLESLDDVQEVYTN-V 237
Query: 240 IFD 242
+FD
Sbjct: 238 VFD 240
>sp|Q7W7T8|Y2422_BORPA Probable transcriptional regulatory protein BPP2422 OS=Bordetella
parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253)
GN=BPP2422 PE=3 SV=1
Length = 243
Score = 268 bits (686), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 122/243 (50%), Positives = 171/243 (70%), Gaps = 4/243 (1%)
Query: 1 MAGHSKWANIKRKKLIVDAKRGKICTRIMRELRVAINFGN-NPDTNIKLRLAIEKALDAN 59
MAGHSKWANI+ +K DAKRGK+ T+I+RE+ VA G +PD+N +LR+A +KA DAN
Sbjct: 1 MAGHSKWANIQHRKGRQDAKRGKLWTKIIREITVAARAGGADPDSNPRLRMAWDKATDAN 60
Query: 60 IPKNNIFRAIQKNNSNIKNENINYIEVRYEGYSVNGAAIIVDCITNNRMRTVSNIRNIFN 119
+PK+NI RAIQ+ E+ Y EVRYEGY + GAA+IVDC+T+NR RTV+ +R+ F
Sbjct: 61 MPKDNIQRAIQRGAGGADGES--YEEVRYEGYGIGGAAVIVDCMTDNRTRTVAEVRHAFA 118
Query: 120 KNGGNLSKEGSVLFMFKHCGQLLFLPNTKKNTLLDLALEKGAEDFLIDKDNKITIITSPS 179
K+GGNL +EGSV FMFKHCGQ +F P T + +++ ALE GAED D++ I ++ +P+
Sbjct: 119 KHGGNLGQEGSVAFMFKHCGQFVFAPGTSEEAVMEAALEAGAEDIATDEEGVIEVVCAPA 178
Query: 180 KFIEIKNSLEMTGFKAESSGIVMRPYTNIVFKDGEAIKLQKLLNELKKLHDVKKVYTNAL 239
F ++ + E G KAE G+VM+ +A+K+QKLL+ L+ L DV++VYTN +
Sbjct: 179 DFTAVRQAFEAAGLKAEVDGVVMKALNETELTGEDAVKMQKLLDVLESLDDVQEVYTN-V 237
Query: 240 IFD 242
+FD
Sbjct: 238 VFD 240
>sp|Q7WL78|Y1871_BORBR Probable transcriptional regulatory protein BB1871 OS=Bordetella
bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50)
GN=BB1871 PE=3 SV=1
Length = 243
Score = 268 bits (686), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 122/243 (50%), Positives = 171/243 (70%), Gaps = 4/243 (1%)
Query: 1 MAGHSKWANIKRKKLIVDAKRGKICTRIMRELRVAINFGN-NPDTNIKLRLAIEKALDAN 59
MAGHSKWANI+ +K DAKRGK+ T+I+RE+ VA G +PD+N +LR+A +KA DAN
Sbjct: 1 MAGHSKWANIQHRKGRQDAKRGKLWTKIIREITVAARAGGADPDSNPRLRMAWDKATDAN 60
Query: 60 IPKNNIFRAIQKNNSNIKNENINYIEVRYEGYSVNGAAIIVDCITNNRMRTVSNIRNIFN 119
+PK+NI RAIQ+ E+ Y EVRYEGY + GAA+IVDC+T+NR RTV+ +R+ F
Sbjct: 61 MPKDNIQRAIQRGAGGADGES--YEEVRYEGYGIGGAAVIVDCMTDNRTRTVAEVRHAFA 118
Query: 120 KNGGNLSKEGSVLFMFKHCGQLLFLPNTKKNTLLDLALEKGAEDFLIDKDNKITIITSPS 179
K+GGNL +EGSV FMFKHCGQ +F P T + +++ ALE GAED D++ I ++ +P+
Sbjct: 119 KHGGNLGQEGSVAFMFKHCGQFVFAPGTSEEAVMEAALEAGAEDIATDEEGVIEVVCAPA 178
Query: 180 KFIEIKNSLEMTGFKAESSGIVMRPYTNIVFKDGEAIKLQKLLNELKKLHDVKKVYTNAL 239
F ++ + E G KAE G+VM+ +A+K+QKLL+ L+ L DV++VYTN +
Sbjct: 179 DFTAVRQAFEAAGLKAEVDGVVMKALNETELTGEDAVKMQKLLDVLESLDDVQEVYTN-V 237
Query: 240 IFD 242
+FD
Sbjct: 238 VFD 240
>sp|Q46YA0|Y2522_CUPPJ Probable transcriptional regulatory protein Reut_A2522
OS=Cupriavidus pinatubonensis (strain JMP134 / LMG 1197)
GN=Reut_A2522 PE=3 SV=1
Length = 241
Score = 268 bits (684), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 128/241 (53%), Positives = 179/241 (74%), Gaps = 3/241 (1%)
Query: 1 MAGHSKWANIKRKKLIVDAKRGKICTRIMRELRVAINFGN-NPDTNIKLRLAIEKALDAN 59
MAGHSKWANIK KK DAKRGKI TR+++E+ VA G +PD+N +LRL+++KA+DAN
Sbjct: 1 MAGHSKWANIKHKKAAADAKRGKIWTRLIKEITVAAKLGGGDPDSNPRLRLSMDKAMDAN 60
Query: 60 IPKNNIFRAIQKNNSNIKNENINYIEVRYEGYSVNGAAIIVDCITNNRMRTVSNIRNIFN 119
+PK+NI RAIQ+ + E +NY E+RYEGY ++GAAIIVDC+T+NR RTV+ +R+ F+
Sbjct: 61 MPKDNIQRAIQRGVGGL--EGVNYEEIRYEGYGLSGAAIIVDCLTDNRTRTVAEVRHAFS 118
Query: 120 KNGGNLSKEGSVLFMFKHCGQLLFLPNTKKNTLLDLALEKGAEDFLIDKDNKITIITSPS 179
K+GGN+ EGSV FMF HCGQ LF P T ++ L+D ALE GA+D + ++D I + P+
Sbjct: 119 KHGGNMGTEGSVAFMFTHCGQFLFAPGTPEDKLMDAALEAGADDVVTNEDGSIEVTCPPN 178
Query: 180 KFIEIKNSLEMTGFKAESSGIVMRPYTNIVFKDGEAIKLQKLLNELKKLHDVKKVYTNAL 239
F +K +LE GFKAE + +VM+P + F +A+K+QKLL+ L+ L DV++V+TNA+
Sbjct: 179 DFSAVKAALEAAGFKAEVADVVMKPQNEVDFTGDDAVKMQKLLDALENLDDVQEVFTNAV 238
Query: 240 I 240
I
Sbjct: 239 I 239
>sp|Q2KYW0|Y2207_BORA1 Probable transcriptional regulatory protein BAV2207 OS=Bordetella
avium (strain 197N) GN=BAV2207 PE=3 SV=1
Length = 243
Score = 267 bits (683), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 121/243 (49%), Positives = 173/243 (71%), Gaps = 4/243 (1%)
Query: 1 MAGHSKWANIKRKKLIVDAKRGKICTRIMRELRVAINFGN-NPDTNIKLRLAIEKALDAN 59
MAGHSKWANI+ +K DAKRGK+ T+I+RE+ VA G +PD+N +LRLA +KA DAN
Sbjct: 1 MAGHSKWANIQHRKGRQDAKRGKLWTKIIREITVAARAGGADPDSNPRLRLAWDKATDAN 60
Query: 60 IPKNNIFRAIQKNNSNIKNENINYIEVRYEGYSVNGAAIIVDCITNNRMRTVSNIRNIFN 119
+PK+N+ RAIQ+ +N Y EVRYEGY + GAA+IVDC+T+NR RTV+ +R+ F
Sbjct: 61 MPKDNVQRAIQRGAGGADGDN--YEEVRYEGYGIGGAAVIVDCMTDNRTRTVAEVRHAFA 118
Query: 120 KNGGNLSKEGSVLFMFKHCGQLLFLPNTKKNTLLDLALEKGAEDFLIDKDNKITIITSPS 179
KNGGNL +EGSV FMFKHCGQ LF P + ++ ++++AL+ GAED + D + I +I +P+
Sbjct: 119 KNGGNLGQEGSVAFMFKHCGQFLFAPGSSEDKVMEVALDAGAEDVITDDEGGIEVICAPA 178
Query: 180 KFIEIKNSLEMTGFKAESSGIVMRPYTNIVFKDGEAIKLQKLLNELKKLHDVKKVYTNAL 239
+ ++ + E G KAE ++M+ + +AIK+QKLL+ L+ L DV++VYTN +
Sbjct: 179 DYPALRQAFEAAGLKAEVDAVIMKAQSETELTGDDAIKMQKLLDALEGLDDVQEVYTN-V 237
Query: 240 IFD 242
+FD
Sbjct: 238 VFD 240
>sp|B3R3E4|Y859_CUPTR Probable transcriptional regulatory protein RALTA_A0859
OS=Cupriavidus taiwanensis (strain R1 / LMG 19424)
GN=RALTA_A0859 PE=3 SV=1
Length = 241
Score = 267 bits (683), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 129/243 (53%), Positives = 178/243 (73%), Gaps = 3/243 (1%)
Query: 1 MAGHSKWANIKRKKLIVDAKRGKICTRIMRELRVAINFGN-NPDTNIKLRLAIEKALDAN 59
MAGHSKWANIK KK DAKRGKI TR+++E+ VA G +PD+N +LRL+++KA+DAN
Sbjct: 1 MAGHSKWANIKHKKAAADAKRGKIWTRLIKEITVAAKLGGGDPDSNPRLRLSMDKAMDAN 60
Query: 60 IPKNNIFRAIQKNNSNIKNENINYIEVRYEGYSVNGAAIIVDCITNNRMRTVSNIRNIFN 119
+PK+NI RAIQ+ + E +NY E+RYEGY ++GAAIIVDC+T+NR RTV+ +R+ F+
Sbjct: 61 MPKDNIQRAIQRGVGGL--EGVNYEEIRYEGYGLSGAAIIVDCLTDNRTRTVAEVRHAFS 118
Query: 120 KNGGNLSKEGSVLFMFKHCGQLLFLPNTKKNTLLDLALEKGAEDFLIDKDNKITIITSPS 179
K+GGN+ EGSV FMF HCGQ LF P T ++ L+D ALE GA+D + + D I + P+
Sbjct: 119 KHGGNMGTEGSVAFMFTHCGQFLFAPGTPEDKLMDAALEAGADDVVTNDDGSIEVTCPPN 178
Query: 180 KFIEIKNSLEMTGFKAESSGIVMRPYTNIVFKDGEAIKLQKLLNELKKLHDVKKVYTNAL 239
F +K +LE GFKAE + +VM+P + F +A K+QKLL+ L+ L DV++V+TNA+
Sbjct: 179 DFSAVKAALEGAGFKAEVADVVMKPQNEVSFSGDDAAKMQKLLDALENLDDVQEVFTNAV 238
Query: 240 IFD 242
I D
Sbjct: 239 IED 241
>sp|Q82XP6|Y210_NITEU Probable transcriptional regulatory protein NE0210 OS=Nitrosomonas
europaea (strain ATCC 19718 / NBRC 14298) GN=NE0210 PE=3
SV=1
Length = 241
Score = 263 bits (673), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 117/241 (48%), Positives = 175/241 (72%), Gaps = 3/241 (1%)
Query: 1 MAGHSKWANIKRKKLIVDAKRGKICTRIMRELRVAINFGN-NPDTNIKLRLAIEKALDAN 59
MAGHSKWANIK KK DAKRGKI TR+++E+ VA G +P++N +LRLA++KA N
Sbjct: 1 MAGHSKWANIKHKKAAQDAKRGKIFTRLIKEITVAARLGGGDPNSNPRLRLAMDKAFGHN 60
Query: 60 IPKNNIFRAIQKNNSNIKNENINYIEVRYEGYSVNGAAIIVDCITNNRMRTVSNIRNIFN 119
+PK+N+ RAI++ + E +NY E+RYEGY ++GAA++VDC+T+NR RTV+ +R+ F
Sbjct: 61 MPKDNVERAIKRGCGEL--EGVNYEEIRYEGYGISGAAVMVDCMTDNRTRTVAAVRHAFT 118
Query: 120 KNGGNLSKEGSVLFMFKHCGQLLFLPNTKKNTLLDLALEKGAEDFLIDKDNKITIITSPS 179
K+GGNL +GSV ++FKHCGQLLF P + LL+ ALE GAED + + D + +IT P
Sbjct: 119 KHGGNLGTDGSVAYLFKHCGQLLFAPGVGEAQLLEAALEAGAEDVISNDDGSLEVITGPD 178
Query: 180 KFIEIKNSLEMTGFKAESSGIVMRPYTNIVFKDGEAIKLQKLLNELKKLHDVKKVYTNAL 239
F+ ++++LE GFKAE + + +P ++ + +A+K+QKLL+ L+ + DV+ VYT+A+
Sbjct: 179 TFVSVRDTLEKAGFKAELAEVTWKPENEVLLQGDDAVKMQKLLDALEDIDDVQDVYTSAV 238
Query: 240 I 240
+
Sbjct: 239 L 239
>sp|Q1LQA5|Y785_RALME Probable transcriptional regulatory protein Rmet_0785 OS=Ralstonia
metallidurans (strain CH34 / ATCC 43123 / DSM 2839)
GN=Rmet_0785 PE=3 SV=1
Length = 241
Score = 262 bits (669), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 127/241 (52%), Positives = 174/241 (72%), Gaps = 3/241 (1%)
Query: 1 MAGHSKWANIKRKKLIVDAKRGKICTRIMRELRVAINFGNNP-DTNIKLRLAIEKALDAN 59
MAGHSKWANIK KK DAKRGK+ TR+++E+ VA G D+N +LRLA+EKA+DAN
Sbjct: 1 MAGHSKWANIKHKKAAADAKRGKVWTRLIKEITVAAKLGGGEFDSNPRLRLAMEKAMDAN 60
Query: 60 IPKNNIFRAIQKNNSNIKNENINYIEVRYEGYSVNGAAIIVDCITNNRMRTVSNIRNIFN 119
+PK+NI RAIQ+ + E NY E+RYEGY + GAAIIVDC+T+NR RTV+ +R+ F+
Sbjct: 61 MPKDNIQRAIQRGVGGL--EGANYEEIRYEGYGLAGAAIIVDCLTDNRTRTVAEVRHAFS 118
Query: 120 KNGGNLSKEGSVLFMFKHCGQLLFLPNTKKNTLLDLALEKGAEDFLIDKDNKITIITSPS 179
K+GGN+ EGSV FMF HCGQ LF P T ++ L+D ALE GA+D + + D I + P+
Sbjct: 119 KHGGNMGTEGSVAFMFTHCGQFLFAPGTPEDKLMDAALEAGADDVVTNDDESIEVTCPPN 178
Query: 180 KFIEIKNSLEMTGFKAESSGIVMRPYTNIVFKDGEAIKLQKLLNELKKLHDVKKVYTNAL 239
F +K +LE GFKAE + +VM+P + F +A+K+QKLL+ L+ L DV++V+TNA+
Sbjct: 179 DFGAVKAALEAAGFKAEVADVVMKPQNEVSFVGDDAVKMQKLLDALENLDDVQEVFTNAV 238
Query: 240 I 240
+
Sbjct: 239 V 239
>sp|A4SWH2|Y618_POLSQ Probable transcriptional regulatory protein Pnuc_0618
OS=Polynucleobacter necessarius subsp. asymbioticus
(strain DSM 18221 / CIP 109841 / QLW-P1DMWA-1)
GN=Pnuc_0618 PE=3 SV=1
Length = 239
Score = 259 bits (662), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 119/241 (49%), Positives = 172/241 (71%), Gaps = 3/241 (1%)
Query: 1 MAGHSKWANIKRKKLIVDAKRGKICTRIMRELRVAINFGNNPDT-NIKLRLAIEKALDAN 59
MAGHSKWANI+ +K D KRGKI T++++E+ VA G T N +LRLAI+KA DAN
Sbjct: 1 MAGHSKWANIQHRKGRQDEKRGKIWTKLIKEITVAAKMGGGDLTANPRLRLAIDKAKDAN 60
Query: 60 IPKNNIFRAIQKNNSNIKNENINYIEVRYEGYSVNGAAIIVDCITNNRMRTVSNIRNIFN 119
+P +N+ RAIQ+ ++ E +NY E+RYEGY +NGAAIIVDC+T+NR RTV+ +R+ FN
Sbjct: 61 MPNDNVQRAIQRGTGSL--EGVNYEEIRYEGYGMNGAAIIVDCLTDNRTRTVAEVRHAFN 118
Query: 120 KNGGNLSKEGSVLFMFKHCGQLLFLPNTKKNTLLDLALEKGAEDFLIDKDNKITIITSPS 179
KNGGN+ EGSV F+FKHCGQ+LF P T ++ L+++AL+ GAED + D + ++T
Sbjct: 119 KNGGNMGTEGSVAFLFKHCGQMLFAPGTSEDQLMEVALDAGAEDVITHDDGSLEVLTPVP 178
Query: 180 KFIEIKNSLEMTGFKAESSGIVMRPYTNIVFKDGEAIKLQKLLNELKKLHDVKKVYTNAL 239
F ++++++ G KAE + + MRP T I + +A +QKLL+ L+ L DV++V+TNA
Sbjct: 179 DFSKVQDAISQAGLKAELATVAMRPETEIALEGDQAESMQKLLDALENLDDVQEVFTNAA 238
Query: 240 I 240
+
Sbjct: 239 L 239
>sp|Q0KD59|Y916_CUPNH Probable transcriptional regulatory protein H16_A0916
OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM
428 / Stanier 337) GN=H16_A0916 PE=3 SV=1
Length = 241
Score = 259 bits (662), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 127/243 (52%), Positives = 175/243 (72%), Gaps = 3/243 (1%)
Query: 1 MAGHSKWANIKRKKLIVDAKRGKICTRIMRELRVAINFGN-NPDTNIKLRLAIEKALDAN 59
MAGHSKWANIK KK DAKRGKI TR+++E+ VA G + D+N +LRL+I+KA+DAN
Sbjct: 1 MAGHSKWANIKHKKAAADAKRGKIWTRLIKEITVAAKLGGGDVDSNPRLRLSIDKAMDAN 60
Query: 60 IPKNNIFRAIQKNNSNIKNENINYIEVRYEGYSVNGAAIIVDCITNNRMRTVSNIRNIFN 119
+PK+NI RAIQ+ + E NY E+RYEGY + GAAIIVDC+T+NR RTV+ +R+ F+
Sbjct: 61 MPKDNIQRAIQRGVGGM--EGANYEEIRYEGYGLAGAAIIVDCLTDNRTRTVAEVRHAFS 118
Query: 120 KNGGNLSKEGSVLFMFKHCGQLLFLPNTKKNTLLDLALEKGAEDFLIDKDNKITIITSPS 179
K+GGN+ EGSV FMF HCGQ L+ P T ++ L++ ALE GA+D + + D I + P+
Sbjct: 119 KHGGNMGTEGSVAFMFTHCGQFLYAPGTPEDKLMEAALEAGADDVVTNDDGSIEVTCPPN 178
Query: 180 KFIEIKNSLEMTGFKAESSGIVMRPYTNIVFKDGEAIKLQKLLNELKKLHDVKKVYTNAL 239
F +K +LE GFKAE + +VM+P + F +A K+QKLL+ L+ L DV++V+TNA+
Sbjct: 179 DFSAVKAALEAAGFKAEVADVVMKPQNEVSFAGDDAAKMQKLLDALENLDDVQEVFTNAV 238
Query: 240 IFD 242
I D
Sbjct: 239 IED 241
>sp|Q8XXC5|Y2190_RALSO Probable transcriptional regulatory protein RSc2190 OS=Ralstonia
solanacearum (strain GMI1000) GN=RSc2190 PE=3 SV=1
Length = 241
Score = 258 bits (659), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 126/241 (52%), Positives = 174/241 (72%), Gaps = 3/241 (1%)
Query: 1 MAGHSKWANIKRKKLIVDAKRGKICTRIMRELRVAINFGNNP-DTNIKLRLAIEKALDAN 59
MAGHSKWANIK KK DAKRGKI TR+++E+ VA G D+N +LRLAI+K DAN
Sbjct: 1 MAGHSKWANIKHKKAAADAKRGKIWTRLIKEITVAARLGGGDVDSNPRLRLAIDKGTDAN 60
Query: 60 IPKNNIFRAIQKNNSNIKNENINYIEVRYEGYSVNGAAIIVDCITNNRMRTVSNIRNIFN 119
+PK+NI RAIQ+ + E +Y E+RYEGY ++GAAIIVDC+T+NR RTV+ +R+ F+
Sbjct: 61 MPKDNIQRAIQRGVGGL--EGAHYEEIRYEGYGISGAAIIVDCMTDNRTRTVAEVRHAFD 118
Query: 120 KNGGNLSKEGSVLFMFKHCGQLLFLPNTKKNTLLDLALEKGAEDFLIDKDNKITIITSPS 179
K+GGN+ +GSV FMF H GQ +F P T ++ L+D ALE GAED + + D I ++ P+
Sbjct: 119 KHGGNMGTQGSVAFMFDHVGQFIFAPGTPEDKLMDAALEAGAEDVVTNDDGSIEVLCPPN 178
Query: 180 KFIEIKNSLEMTGFKAESSGIVMRPYTNIVFKDGEAIKLQKLLNELKKLHDVKKVYTNAL 239
F ++K +LE GFKAE + ++M+P T + F +A K+QKLL+ L+ L DV++VYTNA+
Sbjct: 179 DFAKVKAALEGAGFKAELAEVIMKPQTEVEFTGDDAAKMQKLLDALENLDDVQEVYTNAV 238
Query: 240 I 240
I
Sbjct: 239 I 239
>sp|Q0AJA6|Y281_NITEC Probable transcriptional regulatory protein Neut_0281
OS=Nitrosomonas eutropha (strain C91) GN=Neut_0281 PE=3
SV=1
Length = 241
Score = 257 bits (656), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 117/241 (48%), Positives = 172/241 (71%), Gaps = 3/241 (1%)
Query: 1 MAGHSKWANIKRKKLIVDAKRGKICTRIMRELRVAINFGN-NPDTNIKLRLAIEKALDAN 59
MAGHSKWANIK KK DAKRGKI TR+++E+ VA G +P +N +LRLA++KA N
Sbjct: 1 MAGHSKWANIKHKKAAQDAKRGKIFTRLIKEITVAARLGGGDPGSNPRLRLAMDKAFGHN 60
Query: 60 IPKNNIFRAIQKNNSNIKNENINYIEVRYEGYSVNGAAIIVDCITNNRMRTVSNIRNIFN 119
+PK+N+ RAI++ + E +NY E+RYEGY V+GAA++VDC+T+NR RTV+++R+ F
Sbjct: 61 MPKDNVERAIKRGCGEL--EGVNYEEIRYEGYGVSGAAVMVDCMTDNRTRTVADVRHAFT 118
Query: 120 KNGGNLSKEGSVLFMFKHCGQLLFLPNTKKNTLLDLALEKGAEDFLIDKDNKITIITSPS 179
K+GGNL +GSV ++F HCGQLLF P+ + LL++AL GAED + + D + +ITSP
Sbjct: 119 KHGGNLGTDGSVSYLFTHCGQLLFAPDIDEARLLEVALNAGAEDVIDNDDGSLEVITSPD 178
Query: 180 KFIEIKNSLEMTGFKAESSGIVMRPYTNIVFKDGEAIKLQKLLNELKKLHDVKKVYTNAL 239
F+ +++ LE FKAE + + +P I+ + +A K+QKLL+ L+ + DV+ VYT A+
Sbjct: 179 TFVAVRDELEKAAFKAELAEVTWKPENEILLQGDDAAKMQKLLDALEDIDDVQDVYTTAV 238
Query: 240 I 240
+
Sbjct: 239 L 239
>sp|B2U8Z2|Y2388_RALPJ Probable transcriptional regulatory protein Rpic_2388 OS=Ralstonia
pickettii (strain 12J) GN=Rpic_2388 PE=3 SV=1
Length = 241
Score = 256 bits (655), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 125/241 (51%), Positives = 174/241 (72%), Gaps = 3/241 (1%)
Query: 1 MAGHSKWANIKRKKLIVDAKRGKICTRIMRELRVAINFGN-NPDTNIKLRLAIEKALDAN 59
MAGHSKWANIK KK DAKRGKI TR+++E+ VA G + D+N +LRLA++KA DAN
Sbjct: 1 MAGHSKWANIKHKKAAADAKRGKIWTRLIKEITVAARLGGGDADSNPRLRLAMDKATDAN 60
Query: 60 IPKNNIFRAIQKNNSNIKNENINYIEVRYEGYSVNGAAIIVDCITNNRMRTVSNIRNIFN 119
+PK+NI RAIQ+ + E NY E+RYEGY +NGAA+IVDC+T+NR RTV+ +R+ F+
Sbjct: 61 MPKDNINRAIQRGVGGL--EGANYEEIRYEGYGINGAAVIVDCLTDNRTRTVAEVRHGFD 118
Query: 120 KNGGNLSKEGSVLFMFKHCGQLLFLPNTKKNTLLDLALEKGAEDFLIDKDNKITIITSPS 179
K GGN+ GSV F+F H GQ +F P T ++ L+D ALE GA+D + D + +I P
Sbjct: 119 KYGGNMGTSGSVAFLFDHIGQFIFAPGTPEDKLMDAALEAGADDVITHDDGSLEVICPPH 178
Query: 180 KFIEIKNSLEMTGFKAESSGIVMRPYTNIVFKDGEAIKLQKLLNELKKLHDVKKVYTNAL 239
F ++K +LE GFKAE + ++M+P T +VF +A+K+QKLL+ L+ L DV++V+TNA+
Sbjct: 179 DFAKVKTALEAAGFKAELAEVIMKPQTEVVFTGEDAVKMQKLLDVLENLDDVQEVFTNAV 238
Query: 240 I 240
I
Sbjct: 239 I 239
>sp|B2T2A5|Y1301_BURPP Probable transcriptional regulatory protein Bphyt_1301
OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN)
GN=Bphyt_1301 PE=3 SV=1
Length = 242
Score = 255 bits (652), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 123/243 (50%), Positives = 175/243 (72%), Gaps = 3/243 (1%)
Query: 1 MAGHSKWANIKRKKLIVDAKRGKICTRIMRELRVAINFGNNP-DTNIKLRLAIEKALDAN 59
MAGHSKWANIK KK DAKRGK+ TR+++E++VA G D+N +LRLA+EKA DAN
Sbjct: 1 MAGHSKWANIKHKKAAADAKRGKVWTRLIKEIQVAARMGGGDIDSNPRLRLAVEKAYDAN 60
Query: 60 IPKNNIFRAIQKNNSNIKNENINYIEVRYEGYSVNGAAIIVDCITNNRMRTVSNIRNIFN 119
+PK+N+ RAIQ+ + + +Y E+RYEGY + GAA+IVD +T+NR RTV+ +R+ F+
Sbjct: 61 MPKDNVNRAIQRGVGGV--DGASYEEIRYEGYGIGGAAVIVDTMTDNRTRTVAEVRHAFS 118
Query: 120 KNGGNLSKEGSVLFMFKHCGQLLFLPNTKKNTLLDLALEKGAEDFLIDKDNKITIITSPS 179
KNGGN+ +GSV FMF H GQ LF P T ++ L++ ALE GA+D + + D I ++ P+
Sbjct: 119 KNGGNMGTDGSVSFMFDHVGQFLFAPGTAEDKLMEAALEAGADDVVTNDDGSIEVLCPPN 178
Query: 180 KFIEIKNSLEMTGFKAESSGIVMRPYTNIVFKDGEAIKLQKLLNELKKLHDVKKVYTNAL 239
F ++K++LE GFKAE + + M+P T + F +A+K+QKLL+ L+ L DV++VYTNA
Sbjct: 179 DFPKVKSALEAAGFKAELAEVTMKPQTEVEFTGEDAVKMQKLLDALENLDDVQEVYTNAA 238
Query: 240 IFD 242
I D
Sbjct: 239 IAD 241
>sp|Q142L6|Y1185_BURXL Probable transcriptional regulatory protein Bxeno_A1185
OS=Burkholderia xenovorans (strain LB400) GN=Bxeno_A1185
PE=3 SV=1
Length = 242
Score = 255 bits (652), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 123/241 (51%), Positives = 174/241 (72%), Gaps = 3/241 (1%)
Query: 1 MAGHSKWANIKRKKLIVDAKRGKICTRIMRELRVAINFGNNP-DTNIKLRLAIEKALDAN 59
MAGHSKWANIK KK DAKRGK+ TR+++E++VA G D+N +LRLA+EKA DAN
Sbjct: 1 MAGHSKWANIKHKKAAADAKRGKVWTRLIKEIQVAARMGGGDIDSNPRLRLAVEKAYDAN 60
Query: 60 IPKNNIFRAIQKNNSNIKNENINYIEVRYEGYSVNGAAIIVDCITNNRMRTVSNIRNIFN 119
+PK+N+ RAIQ+ + + +Y E+RYEGY + GAA+IVD +T+NR RTV+ +R+ F+
Sbjct: 61 MPKDNVNRAIQRGVGGV--DGASYEEIRYEGYGIGGAAVIVDTMTDNRTRTVAEVRHAFS 118
Query: 120 KNGGNLSKEGSVLFMFKHCGQLLFLPNTKKNTLLDLALEKGAEDFLIDKDNKITIITSPS 179
KNGGN+ +GSV FMF H GQ LF P T ++ L++ ALE GAED + + D I ++ P+
Sbjct: 119 KNGGNMGTDGSVSFMFDHVGQFLFAPGTPEDKLMEAALEAGAEDVVTNDDGSIEVLCPPN 178
Query: 180 KFIEIKNSLEMTGFKAESSGIVMRPYTNIVFKDGEAIKLQKLLNELKKLHDVKKVYTNAL 239
F ++K++LE GFKAE + + M+P T + F +A+K+QKLL+ L+ L DV++VYTNA
Sbjct: 179 DFPKVKSALEAAGFKAELAEVTMKPQTEVEFTGEDAVKMQKLLDALENLDDVQEVYTNAA 238
Query: 240 I 240
I
Sbjct: 239 I 239
>sp|Q5P3B7|Y2072_AROAE Probable transcriptional regulatory protein AZOSEA20720
OS=Aromatoleum aromaticum (strain EbN1) GN=AZOSEA20720
PE=3 SV=1
Length = 241
Score = 249 bits (637), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 110/241 (45%), Positives = 170/241 (70%), Gaps = 3/241 (1%)
Query: 1 MAGHSKWANIKRKKLIVDAKRGKICTRIMRELRVAINFGN-NPDTNIKLRLAIEKALDAN 59
MAGHSKWANI+ +K DAKRGK+ T++++E+ VA G +P+ N +LRLA++KA N
Sbjct: 1 MAGHSKWANIQHRKGRQDAKRGKVFTKLIKEITVAARMGGGDPNFNPRLRLAVDKAKAEN 60
Query: 60 IPKNNIFRAIQKNNSNIKNENINYIEVRYEGYSVNGAAIIVDCITNNRMRTVSNIRNIFN 119
+P NI RAI++ + + ++Y E RYEGY + GAA++VDC+T+N+ RTV+++R+ F+
Sbjct: 61 MPSENIDRAIKRGTGEL--DGVSYEEARYEGYGIGGAAVMVDCLTDNKTRTVADVRHAFS 118
Query: 120 KNGGNLSKEGSVLFMFKHCGQLLFLPNTKKNTLLDLALEKGAEDFLIDKDNKITIITSPS 179
KNGGN+ +G V F FKHCGQL+F P T ++ L++ ALE GAED + + D I +IT+P
Sbjct: 119 KNGGNMGTDGCVAFQFKHCGQLMFAPGTSEDALMEAALEAGAEDVVTNDDGSIEVITAPY 178
Query: 180 KFIEIKNSLEMTGFKAESSGIVMRPYTNIVFKDGEAIKLQKLLNELKKLHDVKKVYTNAL 239
++ +K++LE F+AE + M+P G+A ++QKLL+ L+ L DV++VYT+A+
Sbjct: 179 EYSNVKDALEKASFRAEFGEVTMKPQNETELSGGDAERMQKLLDALESLDDVQEVYTSAV 238
Query: 240 I 240
+
Sbjct: 239 M 239
>sp|B2JE34|Y2064_BURP8 Probable transcriptional regulatory protein Bphy_2064
OS=Burkholderia phymatum (strain DSM 17167 / STM815)
GN=Bphy_2064 PE=3 SV=1
Length = 242
Score = 248 bits (633), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 125/243 (51%), Positives = 174/243 (71%), Gaps = 3/243 (1%)
Query: 1 MAGHSKWANIKRKKLIVDAKRGKICTRIMRELRVAINFGNNP-DTNIKLRLAIEKALDAN 59
MAGHSKWANIK KK DAK+GK+ TR+++E++VA G D+N +LRLA++KA DAN
Sbjct: 1 MAGHSKWANIKHKKAAADAKKGKVWTRLIKEIQVAARMGGGDIDSNPRLRLAVDKAYDAN 60
Query: 60 IPKNNIFRAIQKNNSNIKNENINYIEVRYEGYSVNGAAIIVDCITNNRMRTVSNIRNIFN 119
+PK+NI RAIQ+ + + NY E+RYEGY + GAAIIVD +T+NR RTV+ +R+ F+
Sbjct: 61 MPKDNINRAIQRGVGGV--DGANYEEIRYEGYGIGGAAIIVDTMTDNRTRTVAEVRHAFS 118
Query: 120 KNGGNLSKEGSVLFMFKHCGQLLFLPNTKKNTLLDLALEKGAEDFLIDKDNKITIITSPS 179
K GGN+ +GSV FMF H GQ LF P T ++ L+D ALE GA+D + ++D I +I P+
Sbjct: 119 KFGGNMGTDGSVSFMFDHVGQFLFAPGTPEDKLMDAALEAGADDVVTNEDGSIEVICPPN 178
Query: 180 KFIEIKNSLEMTGFKAESSGIVMRPYTNIVFKDGEAIKLQKLLNELKKLHDVKKVYTNAL 239
F ++K +LE GFKAE + + M+P T + F +A+K+QKLL+ L+ L DV++VYTNA
Sbjct: 179 DFSKVKAALETAGFKAELAEVTMKPQTEVEFAGDDAVKMQKLLDALENLDDVQEVYTNAA 238
Query: 240 IFD 242
I D
Sbjct: 239 IAD 241
>sp|Q9JYC7|Y1648_NEIMB Probable transcriptional regulatory protein NMB1648 OS=Neisseria
meningitidis serogroup B (strain MC58) GN=NMB1648 PE=3
SV=1
Length = 242
Score = 245 bits (625), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 113/241 (46%), Positives = 167/241 (69%), Gaps = 3/241 (1%)
Query: 1 MAGHSKWANIKRKKLIVDAKRGKICTRIMRELRVAINFGN-NPDTNIKLRLAIEKALDAN 59
MAGHSKWANI+ KK DAKRGKI TR+++E+ VA G +P +N +LRLA+EKA + N
Sbjct: 1 MAGHSKWANIQHKKARQDAKRGKIFTRLIKEITVAARMGGGDPGSNPRLRLALEKAAENN 60
Query: 60 IPKNNIFRAIQKNNSNIKNENINYIEVRYEGYSVNGAAIIVDCITNNRMRTVSNIRNIFN 119
+PK+N+ RAI K N+ E + YIE+RYEGY + GAA++VDC+T+N+ RTV+++R+ F
Sbjct: 61 MPKDNVQRAIDKGTGNL--EGVEYIELRYEGYGIGGAALMVDCLTDNKTRTVADVRHAFT 118
Query: 120 KNGGNLSKEGSVLFMFKHCGQLLFLPNTKKNTLLDLALEKGAEDFLIDKDNKITIITSPS 179
KNGGNL +G V F F H G L+F P ++ L++ ALE GAED + + D I +IT+P+
Sbjct: 119 KNGGNLGTDGCVAFNFVHQGYLVFEPGVDEDALMEAALEAGAEDVVTNDDGSIEVITAPN 178
Query: 180 KFIEIKNSLEMTGFKAESSGIVMRPYTNIVFKDGEAIKLQKLLNELKKLHDVKKVYTNAL 239
+ +K++LE G+K+ + MR +A+K+QKL++ L+ L DV+ VYT+A+
Sbjct: 179 DWAGVKSALEAAGYKSVDGDVTMRAQNETELSGDDAVKMQKLIDALEDLDDVQDVYTSAV 238
Query: 240 I 240
+
Sbjct: 239 L 239
>sp|Q9JTB0|Y1902_NEIMA Probable transcriptional regulatory protein NMA1902 OS=Neisseria
meningitidis serogroup A / serotype 4A (strain Z2491)
GN=NMA1902 PE=3 SV=1
Length = 242
Score = 244 bits (623), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 113/241 (46%), Positives = 166/241 (68%), Gaps = 3/241 (1%)
Query: 1 MAGHSKWANIKRKKLIVDAKRGKICTRIMRELRVAINFGN-NPDTNIKLRLAIEKALDAN 59
MAGHSKWANI+ KK DAKRGKI TR+++E+ VA G +P N +LRLA+EKA + N
Sbjct: 1 MAGHSKWANIQHKKARQDAKRGKIFTRLIKEITVAARMGGGDPGANPRLRLALEKAAENN 60
Query: 60 IPKNNIFRAIQKNNSNIKNENINYIEVRYEGYSVNGAAIIVDCITNNRMRTVSNIRNIFN 119
+PK+N+ RAI K N+ E + YIE+RYEGY + GAA++VDC+T+N+ RTV+++R+ F
Sbjct: 61 MPKDNVQRAIDKGTGNL--EGVEYIELRYEGYGIGGAALMVDCLTDNKTRTVADVRHAFT 118
Query: 120 KNGGNLSKEGSVLFMFKHCGQLLFLPNTKKNTLLDLALEKGAEDFLIDKDNKITIITSPS 179
KNGGNL +G V F F H G L+F P ++ L++ ALE GAED + + D I +IT+P+
Sbjct: 119 KNGGNLGTDGCVAFNFVHQGYLVFEPGVDEDALMEAALEAGAEDVVTNDDGSIEVITAPN 178
Query: 180 KFIEIKNSLEMTGFKAESSGIVMRPYTNIVFKDGEAIKLQKLLNELKKLHDVKKVYTNAL 239
+ +K++LE G+K+ + MR +A+K+QKL++ L+ L DV+ VYT+A+
Sbjct: 179 DWAGVKSALEAAGYKSVDGDVTMRAQNETELSGDDAVKMQKLIDALEDLDDVQDVYTSAV 238
Query: 240 I 240
+
Sbjct: 239 L 239
>sp|A1KV56|Y1563_NEIMF Probable transcriptional regulatory protein NMC1563 OS=Neisseria
meningitidis serogroup C / serotype 2a (strain ATCC
700532 / FAM18) GN=NMC1563 PE=3 SV=1
Length = 242
Score = 244 bits (623), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 113/241 (46%), Positives = 166/241 (68%), Gaps = 3/241 (1%)
Query: 1 MAGHSKWANIKRKKLIVDAKRGKICTRIMRELRVAINFGN-NPDTNIKLRLAIEKALDAN 59
MAGHSKWANI+ KK DAKRGKI TR+++E+ VA G +P N +LRLA+EKA + N
Sbjct: 1 MAGHSKWANIQHKKARQDAKRGKIFTRLIKEITVAARMGGGDPGANPRLRLALEKAAENN 60
Query: 60 IPKNNIFRAIQKNNSNIKNENINYIEVRYEGYSVNGAAIIVDCITNNRMRTVSNIRNIFN 119
+PK+N+ RAI K N+ E + YIE+RYEGY + GAA++VDC+T+N+ RTV+++R+ F
Sbjct: 61 MPKDNVQRAIDKGTGNL--EGVEYIELRYEGYGIGGAALMVDCLTDNKTRTVADVRHAFT 118
Query: 120 KNGGNLSKEGSVLFMFKHCGQLLFLPNTKKNTLLDLALEKGAEDFLIDKDNKITIITSPS 179
KNGGNL +G V F F H G L+F P ++ L++ ALE GAED + + D I +IT+P+
Sbjct: 119 KNGGNLGTDGCVAFNFVHQGYLVFEPGVDEDALMEAALEAGAEDVVTNDDGSIEVITAPN 178
Query: 180 KFIEIKNSLEMTGFKAESSGIVMRPYTNIVFKDGEAIKLQKLLNELKKLHDVKKVYTNAL 239
+ +K++LE G+K+ + MR +A+K+QKL++ L+ L DV+ VYT+A+
Sbjct: 179 DWAGVKSALEAAGYKSVDGDVTMRAQNETELSGDDAVKMQKLIDALEDLDDVQDVYTSAV 238
Query: 240 I 240
+
Sbjct: 239 L 239
>sp|Q5F792|Y1291_NEIG1 Probable transcriptional regulatory protein NGO1291 OS=Neisseria
gonorrhoeae (strain ATCC 700825 / FA 1090) GN=NGO1291
PE=3 SV=1
Length = 242
Score = 244 bits (622), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 113/241 (46%), Positives = 166/241 (68%), Gaps = 3/241 (1%)
Query: 1 MAGHSKWANIKRKKLIVDAKRGKICTRIMRELRVAINFGN-NPDTNIKLRLAIEKALDAN 59
MAGHSKWANI+ KK DAKRGKI TR+++E+ VA G +P N +LRLA+EKA + N
Sbjct: 1 MAGHSKWANIQHKKARQDAKRGKIFTRLIKEITVAARMGGGDPGANPRLRLALEKAAENN 60
Query: 60 IPKNNIFRAIQKNNSNIKNENINYIEVRYEGYSVNGAAIIVDCITNNRMRTVSNIRNIFN 119
+PK+N+ RAI K N+ E + YIE+RYEGY + GAA++VDC+T+N+ RTV+++R+ F
Sbjct: 61 MPKDNVQRAIDKGTGNL--EGVEYIELRYEGYGIGGAALMVDCLTDNKTRTVADVRHAFT 118
Query: 120 KNGGNLSKEGSVLFMFKHCGQLLFLPNTKKNTLLDLALEKGAEDFLIDKDNKITIITSPS 179
KNGGNL +G V F F H G L+F P ++ L++ ALE GAED + + D I +IT+P+
Sbjct: 119 KNGGNLGTDGCVAFNFVHQGYLVFEPGVDEDELMEAALEAGAEDVVTNDDGSIEVITAPN 178
Query: 180 KFIEIKNSLEMTGFKAESSGIVMRPYTNIVFKDGEAIKLQKLLNELKKLHDVKKVYTNAL 239
+ +K++LE G+K+ + MR +A+K+QKL++ L+ L DV+ VYT+A+
Sbjct: 179 DWAGVKSALEAAGYKSVDGDVTMRAQNETELSGDDAVKMQKLIDALEDLDDVQDVYTSAV 238
Query: 240 I 240
+
Sbjct: 239 L 239
>sp|A1K2Y6|Y574_AZOSB Probable transcriptional regulatory protein azo0574 OS=Azoarcus sp.
(strain BH72) GN=azo0574 PE=3 SV=1
Length = 241
Score = 243 bits (621), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 110/241 (45%), Positives = 165/241 (68%), Gaps = 3/241 (1%)
Query: 1 MAGHSKWANIKRKKLIVDAKRGKICTRIMRELRVAINFGN-NPDTNIKLRLAIEKALDAN 59
MAGHSKWANI+ +K DAKRGK+ T++++E+ VA G +P+ N +LRLAI+KA +
Sbjct: 1 MAGHSKWANIQHRKGRQDAKRGKVFTKLIKEVTVAAKMGGGDPNANPRLRLAIDKAKAES 60
Query: 60 IPKNNIFRAIQKNNSNIKNENINYIEVRYEGYSVNGAAIIVDCITNNRMRTVSNIRNIFN 119
+PK+NI AI++ + E + Y E RYEGY + GAA++VDC+T+N+ RTV+++R+ F+
Sbjct: 61 MPKDNIENAIKRGTGQL--EGVTYEEARYEGYGIAGAAVMVDCLTDNKTRTVADVRHAFS 118
Query: 120 KNGGNLSKEGSVLFMFKHCGQLLFLPNTKKNTLLDLALEKGAEDFLIDKDNKITIITSPS 179
K GGN+ +G V F FKHCGQL+F P T ++ L++ ALE GAED + + D I +IT P
Sbjct: 119 KYGGNMGTDGCVAFQFKHCGQLMFAPGTDEDALMEAALEAGAEDVVANDDGSIEVITGPW 178
Query: 180 KFIEIKNSLEMTGFKAESSGIVMRPYTNIVFKDGEAIKLQKLLNELKKLHDVKKVYTNAL 239
+F +K +LE GF AE + M+ +A ++QKLL+ L+ L DV++VYT+A+
Sbjct: 179 EFTTVKETLEKAGFTAEFGEVTMKAQNETELSGDDAARMQKLLDALESLDDVQEVYTSAV 238
Query: 240 I 240
+
Sbjct: 239 L 239
>sp|A4JGH5|Y2379_BURVG Probable transcriptional regulatory protein Bcep1808_2379
OS=Burkholderia vietnamiensis (strain G4 / LMG 22486)
GN=Bcep1808_2379 PE=3 SV=1
Length = 242
Score = 242 bits (618), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 120/243 (49%), Positives = 168/243 (69%), Gaps = 3/243 (1%)
Query: 1 MAGHSKWANIKRKKLIVDAKRGKICTRIMRELRVAINFGN-NPDTNIKLRLAIEKALDAN 59
MAGHSKWANIK KK DAKRGKI TR+++E++VA G + +N +LRLA++KA DAN
Sbjct: 1 MAGHSKWANIKHKKAAADAKRGKIWTRLIKEIQVAARLGGGDASSNPRLRLAVDKAADAN 60
Query: 60 IPKNNIFRAIQKNNSNIKNENINYIEVRYEGYSVNGAAIIVDCITNNRMRTVSNIRNIFN 119
+PK+N+ RAI + + NY E+RYEGY +NGAAIIVD +T+NR RTV+ +R+ F+
Sbjct: 61 MPKDNVKRAIDRGVGGA--DGANYEEIRYEGYGINGAAIIVDTLTDNRTRTVAEVRHAFS 118
Query: 120 KNGGNLSKEGSVLFMFKHCGQLLFLPNTKKNTLLDLALEKGAEDFLIDKDNKITIITSPS 179
K GGN+ +GSV FMF H GQ LF P T ++ L++ ALE GA+D + D I ++
Sbjct: 119 KFGGNMGTDGSVAFMFDHVGQFLFAPGTSEDALMEAALEAGADDVSTNDDGSIEVLCDWQ 178
Query: 180 KFIEIKNSLEMTGFKAESSGIVMRPYTNIVFKDGEAIKLQKLLNELKKLHDVKKVYTNAL 239
F +K++LE GFKAE + + M+P + F +A K+QKLL+ L+ L DV++VYTNA+
Sbjct: 179 AFSAVKDALEAAGFKAELAEVTMKPQNEVEFTGDDAAKMQKLLDALENLDDVQEVYTNAV 238
Query: 240 IFD 242
I +
Sbjct: 239 IVE 241
>sp|A9AJK0|Y2280_BURM1 Probable transcriptional regulatory protein Bmul_0984/BMULJ_02280
OS=Burkholderia multivorans (strain ATCC 17616 / 249)
GN=Bmul_0984 PE=3 SV=1
Length = 242
Score = 242 bits (617), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 119/243 (48%), Positives = 171/243 (70%), Gaps = 3/243 (1%)
Query: 1 MAGHSKWANIKRKKLIVDAKRGKICTRIMRELRVAINFGN-NPDTNIKLRLAIEKALDAN 59
MAGHSKWANIK KK DAKRGKI TR+++E++VA G + +N +LRLA++KA DAN
Sbjct: 1 MAGHSKWANIKHKKAAADAKRGKIWTRLIKEIQVAARLGGGDVSSNPRLRLAVDKAADAN 60
Query: 60 IPKNNIFRAIQKNNSNIKNENINYIEVRYEGYSVNGAAIIVDCITNNRMRTVSNIRNIFN 119
+PK+N+ RAI + + NY E+RYEGY + GAAIIVD +T+NR RTV+ +R+ F+
Sbjct: 61 MPKDNVKRAIDRGVGGA--DGANYEEIRYEGYGIGGAAIIVDTLTDNRTRTVAEVRHAFS 118
Query: 120 KNGGNLSKEGSVLFMFKHCGQLLFLPNTKKNTLLDLALEKGAEDFLIDKDNKITIITSPS 179
K GGN+ +GSV FMF H GQ LF P T ++ L++ ALE GA+D ++D I ++
Sbjct: 119 KFGGNMGTDGSVAFMFDHVGQFLFAPGTSEDALMEAALEAGADDVSTNEDGSIEVLCDWQ 178
Query: 180 KFIEIKNSLEMTGFKAESSGIVMRPYTNIVFKDGEAIKLQKLLNELKKLHDVKKVYTNAL 239
+F ++K++LE GFKAE + + M+P + F +A+K+QKLL+ L+ L DV++VYTNA+
Sbjct: 179 EFSKVKDALEAAGFKAELAEVTMKPQNEVEFTGDDAVKMQKLLDALENLDDVQEVYTNAV 238
Query: 240 IFD 242
I +
Sbjct: 239 IVE 241
>sp|B4RMZ8|Y1508_NEIG2 Probable transcriptional regulatory protein NGK_1508 OS=Neisseria
gonorrhoeae (strain NCCP11945) GN=NGK_1508 PE=3 SV=1
Length = 242
Score = 241 bits (615), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 112/241 (46%), Positives = 165/241 (68%), Gaps = 3/241 (1%)
Query: 1 MAGHSKWANIKRKKLIVDAKRGKICTRIMRELRVAINFGN-NPDTNIKLRLAIEKALDAN 59
MAGHSKWANI+ KK DAKRGKI TR+++E+ VA G +P N +LRLA+EKA + N
Sbjct: 1 MAGHSKWANIQHKKARQDAKRGKIFTRLIKEITVAARMGGGDPGANPRLRLALEKAAENN 60
Query: 60 IPKNNIFRAIQKNNSNIKNENINYIEVRYEGYSVNGAAIIVDCITNNRMRTVSNIRNIFN 119
+PK+N+ RAI K N+ E + YI +RYEGY + GAA++VDC+T+N+ RTV+++R+ F
Sbjct: 61 MPKDNVQRAIDKGTGNL--EGVEYIGLRYEGYGIGGAALMVDCLTDNKTRTVADVRHAFT 118
Query: 120 KNGGNLSKEGSVLFMFKHCGQLLFLPNTKKNTLLDLALEKGAEDFLIDKDNKITIITSPS 179
KNGGNL +G V F F H G L+F P ++ L++ ALE GAED + + D I +IT+P+
Sbjct: 119 KNGGNLGTDGCVAFNFVHQGYLVFEPGVDEDELMEAALEAGAEDVVTNDDGSIEVITAPN 178
Query: 180 KFIEIKNSLEMTGFKAESSGIVMRPYTNIVFKDGEAIKLQKLLNELKKLHDVKKVYTNAL 239
+ +K++LE G+K+ + MR +A+K+QKL++ L+ L DV+ VYT+A+
Sbjct: 179 DWAGVKSALEAAGYKSVDGDVTMRAQNETELSGDDAVKMQKLIDALEDLDDVQDVYTSAV 238
Query: 240 I 240
+
Sbjct: 239 L 239
>sp|Q0BD85|Y2332_BURCM Probable transcriptional regulatory protein Bamb_2332
OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD)
GN=Bamb_2332 PE=3 SV=1
Length = 242
Score = 241 bits (614), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 119/243 (48%), Positives = 170/243 (69%), Gaps = 3/243 (1%)
Query: 1 MAGHSKWANIKRKKLIVDAKRGKICTRIMRELRVAINFGN-NPDTNIKLRLAIEKALDAN 59
MAGHSKWANIK KK DAKRGKI TR+++E++VA G + ++N +LRLA++KA DAN
Sbjct: 1 MAGHSKWANIKHKKAAADAKRGKIWTRLIKEIQVAARLGGGDANSNPRLRLAVDKAADAN 60
Query: 60 IPKNNIFRAIQKNNSNIKNENINYIEVRYEGYSVNGAAIIVDCITNNRMRTVSNIRNIFN 119
+PK+N+ RAI + + NY E+RYEGY ++GAAIIVD +T+NR+RTV+ +R+ F+
Sbjct: 61 MPKDNVKRAIDRGVGGA--DGANYEEIRYEGYGISGAAIIVDTLTDNRIRTVAEVRHAFS 118
Query: 120 KNGGNLSKEGSVLFMFKHCGQLLFLPNTKKNTLLDLALEKGAEDFLIDKDNKITIITSPS 179
K GGN+ +GSV FMF H GQ LF P T ++ L++ ALE GA+D + D I ++
Sbjct: 119 KFGGNMGTDGSVAFMFDHVGQFLFAPGTSEDALMEAALEAGADDVSTNDDGSIEVLCDWQ 178
Query: 180 KFIEIKNSLEMTGFKAESSGIVMRPYTNIVFKDGEAIKLQKLLNELKKLHDVKKVYTNAL 239
F +K++LE GFKAE + + M+P + F +A K+QKLL+ L+ L DV++VYTNA+
Sbjct: 179 AFSAVKDALEAAGFKAELAEVTMKPQNEVEFTGDDAAKMQKLLDALENLDDVQEVYTNAV 238
Query: 240 IFD 242
I +
Sbjct: 239 IVE 241
>sp|B1YU49|Y2210_BURA4 Probable transcriptional regulatory protein BamMC406_2210
OS=Burkholderia ambifaria (strain MC40-6)
GN=BamMC406_2210 PE=3 SV=1
Length = 242
Score = 241 bits (614), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 119/243 (48%), Positives = 169/243 (69%), Gaps = 3/243 (1%)
Query: 1 MAGHSKWANIKRKKLIVDAKRGKICTRIMRELRVAINFGN-NPDTNIKLRLAIEKALDAN 59
MAGHSKWANIK KK DAKRGKI TR+++E++VA G + ++N +LRLA++KA DAN
Sbjct: 1 MAGHSKWANIKHKKAAADAKRGKIWTRLIKEIQVAARLGGGDANSNPRLRLAVDKAADAN 60
Query: 60 IPKNNIFRAIQKNNSNIKNENINYIEVRYEGYSVNGAAIIVDCITNNRMRTVSNIRNIFN 119
+PK+N+ RAI + + NY E+RYEGY ++GAAIIVD +T+NR RTV+ +R+ F+
Sbjct: 61 MPKDNVKRAIDRGVGGA--DGANYEEIRYEGYGISGAAIIVDTLTDNRTRTVAEVRHAFS 118
Query: 120 KNGGNLSKEGSVLFMFKHCGQLLFLPNTKKNTLLDLALEKGAEDFLIDKDNKITIITSPS 179
K GGN+ +GSV FMF H GQ LF P T ++ L++ ALE GA+D + D I ++
Sbjct: 119 KFGGNMGTDGSVAFMFDHVGQFLFAPGTSEDALMEAALEAGADDVSTNDDGSIEVLCDWQ 178
Query: 180 KFIEIKNSLEMTGFKAESSGIVMRPYTNIVFKDGEAIKLQKLLNELKKLHDVKKVYTNAL 239
F +K++LE GFKAE + + M+P + F +A K+QKLL+ L+ L DV++VYTNA+
Sbjct: 179 AFSAVKDALEAAGFKAELAEVTMKPQNEVEFTGDDAAKMQKLLDALENLDDVQEVYTNAV 238
Query: 240 IFD 242
I +
Sbjct: 239 IVE 241
>sp|A1TS27|Y3203_ACIAC Probable transcriptional regulatory protein Aave_3203 OS=Acidovorax
citrulli (strain AAC00-1) GN=Aave_3203 PE=3 SV=1
Length = 239
Score = 239 bits (610), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 115/241 (47%), Positives = 162/241 (67%), Gaps = 3/241 (1%)
Query: 1 MAGHSKWANIKRKKLIVDAKRGKICTRIMRELRVAINFGN-NPDTNIKLRLAIEKALDAN 59
MAGHSKWANI+ +K D KRGKI TRI+RE+ VA G + N +LRLAI+KA AN
Sbjct: 1 MAGHSKWANIQHRKGRQDEKRGKIWTRIIREITVAARAGGGDVSANPRLRLAIDKAKAAN 60
Query: 60 IPKNNIFRAIQKNNSNIKNENINYIEVRYEGYSVNGAAIIVDCITNNRMRTVSNIRNIFN 119
+P + I I K N E + Y E+RYEGY + GAAIIVD +T+NR+RTV+ +R+ F+
Sbjct: 61 MPADRIKYNIDKATGNA--EGLTYEEIRYEGYGIGGAAIIVDTMTDNRVRTVAEVRHAFS 118
Query: 120 KNGGNLSKEGSVLFMFKHCGQLLFLPNTKKNTLLDLALEKGAEDFLIDKDNKITIITSPS 179
K GGN+ EGSV F FKH GQL+F P T ++ ++++ALE GAED + D+D I ++T+P
Sbjct: 119 KYGGNMGTEGSVAFQFKHVGQLIFAPGTSEDKVMEVALEAGAEDVVTDEDGAIEVLTAPG 178
Query: 180 KFIEIKNSLEMTGFKAESSGIVMRPYTNIVFKDGEAIKLQKLLNELKKLHDVKKVYTNAL 239
F +KN+LE G +++ + MRP I +A ++QKLL+ ++ L DV++VY NA
Sbjct: 179 DFEAVKNALEAAGLTPDAADVTMRPDVTIDLAGEDAERMQKLLDVIEDLDDVQEVYHNAA 238
Query: 240 I 240
+
Sbjct: 239 L 239
>sp|Q478D8|Y4067_DECAR Probable transcriptional regulatory protein Daro_4067
OS=Dechloromonas aromatica (strain RCB) GN=Daro_4067
PE=3 SV=1
Length = 241
Score = 239 bits (609), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 109/243 (44%), Positives = 163/243 (67%), Gaps = 3/243 (1%)
Query: 1 MAGHSKWANIKRKKLIVDAKRGKICTRIMRELRVAINFGNNP-DTNIKLRLAIEKALDAN 59
MAGHSKWANI+ +K D KRG ++I +E+ VA G + N +LR+A++KA N
Sbjct: 1 MAGHSKWANIQHRKGRQDEKRGAAFSKIAKEITVASKMGGGDINFNPRLRVAVDKAKGVN 60
Query: 60 IPKNNIFRAIQKNNSNIKNENINYIEVRYEGYSVNGAAIIVDCITNNRMRTVSNIRNIFN 119
+PK+ I AI+K + E + YIE+RYEGY + GAAI+VDC+T+N++RTV+ +R+ F+
Sbjct: 61 MPKDKIDTAIKKGTGEL--EGVEYIEIRYEGYGIGGAAIMVDCLTDNKVRTVAEVRHAFS 118
Query: 120 KNGGNLSKEGSVLFMFKHCGQLLFLPNTKKNTLLDLALEKGAEDFLIDKDNKITIITSPS 179
K GGN+ +G V F FKHCGQ++F P T + L+D A+E GA+D + D I ++T P+
Sbjct: 119 KFGGNMGSDGCVAFQFKHCGQMIFAPGTDEGALMDAAIEAGADDVTTNDDGSIEVLTPPN 178
Query: 180 KFIEIKNSLEMTGFKAESSGIVMRPYTNIVFKDGEAIKLQKLLNELKKLHDVKKVYTNAL 239
++ +K++LE GFK E + M+P VF E +K+QKLL+ L+ L DV+++YT A+
Sbjct: 179 DYMAVKDALEAAGFKPEFGEVTMKPEGENVFAGEEGVKMQKLLDALENLDDVQEIYTTAV 238
Query: 240 IFD 242
I D
Sbjct: 239 IED 241
>sp|Q2SZT0|Y1015_BURTA Probable transcriptional regulatory protein BTH_I1015
OS=Burkholderia thailandensis (strain E264 / ATCC 700388
/ DSM 13276 / CIP 106301) GN=BTH_I1015 PE=3 SV=1
Length = 242
Score = 238 bits (607), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 119/243 (48%), Positives = 169/243 (69%), Gaps = 3/243 (1%)
Query: 1 MAGHSKWANIKRKKLIVDAKRGKICTRIMRELRVAINFGN-NPDTNIKLRLAIEKALDAN 59
MAGHSKWANIK KK DAKRGKI TR+++E++VA G + ++N +LRLA++KA DAN
Sbjct: 1 MAGHSKWANIKHKKAAADAKRGKIWTRLIKEIQVAARLGGGDANSNPRLRLAVDKAADAN 60
Query: 60 IPKNNIFRAIQKNNSNIKNENINYIEVRYEGYSVNGAAIIVDCITNNRMRTVSNIRNIFN 119
+PK+N+ RAI + + NY E+RYEGY + GAAIIVD +T+NR RTV+ +R+ F+
Sbjct: 61 MPKDNVKRAIDRGVGGA--DGANYEEIRYEGYGIGGAAIIVDTLTDNRTRTVAEVRHAFS 118
Query: 120 KNGGNLSKEGSVLFMFKHCGQLLFLPNTKKNTLLDLALEKGAEDFLIDKDNKITIITSPS 179
K GGN+ +GSV FMF H GQ LF P T ++ L++ ALE GA D + D I ++
Sbjct: 119 KFGGNMGTDGSVAFMFDHVGQFLFAPGTSEDALMEAALEAGANDVNTNDDGSIEVLCDWQ 178
Query: 180 KFIEIKNSLEMTGFKAESSGIVMRPYTNIVFKDGEAIKLQKLLNELKKLHDVKKVYTNAL 239
+F ++K++LE GFKAE + + M+P I F +A+K+QKLL+ L+ L DV+ VYTNA+
Sbjct: 179 EFSKVKDALEAGGFKAELAEVTMKPQNEIEFTGEDAVKMQKLLDALENLDDVQDVYTNAV 238
Query: 240 IFD 242
+ +
Sbjct: 239 VIE 241
>sp|A2S4B3|Y3092_BURM9 Probable transcriptional regulatory protein BMA10229_A0792
OS=Burkholderia mallei (strain NCTC 10229)
GN=BMA10229_A0792 PE=3 SV=1
Length = 242
Score = 238 bits (606), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 118/243 (48%), Positives = 169/243 (69%), Gaps = 3/243 (1%)
Query: 1 MAGHSKWANIKRKKLIVDAKRGKICTRIMRELRVAINFGNNP-DTNIKLRLAIEKALDAN 59
MAGHSKWANIK KK DAKRGKI TR+++E++VA G ++N +LRLA++KA DAN
Sbjct: 1 MAGHSKWANIKHKKAAADAKRGKIWTRLIKEIQVAARLGGGDVNSNPRLRLAVDKAADAN 60
Query: 60 IPKNNIFRAIQKNNSNIKNENINYIEVRYEGYSVNGAAIIVDCITNNRMRTVSNIRNIFN 119
+PK+N+ RAI + + NY E+RYEGY + GAAIIVD +T+NR RTV+ +R+ F+
Sbjct: 61 MPKDNVKRAIDRGVGGA--DGANYEEIRYEGYGIGGAAIIVDTLTDNRTRTVAEVRHAFS 118
Query: 120 KNGGNLSKEGSVLFMFKHCGQLLFLPNTKKNTLLDLALEKGAEDFLIDKDNKITIITSPS 179
K GGN+ +GSV FMF H GQ LF P T ++ L++ ALE GA D + D I ++
Sbjct: 119 KFGGNMGTDGSVAFMFDHVGQFLFAPGTSEDALMEAALEAGANDVNTNDDGSIEVLCDWQ 178
Query: 180 KFIEIKNSLEMTGFKAESSGIVMRPYTNIVFKDGEAIKLQKLLNELKKLHDVKKVYTNAL 239
+F ++K++LE GFKAE + + M+P + F +A+K+QKLL+ L+ L DV++VYTNA+
Sbjct: 179 EFSKVKDALEAAGFKAELAEVTMKPQNEVDFTGEDAVKMQKLLDALENLDDVQEVYTNAV 238
Query: 240 IFD 242
+ +
Sbjct: 239 VVE 241
>sp|A1V2G2|Y2875_BURMS Probable transcriptional regulatory protein BMASAVP1_A1075
OS=Burkholderia mallei (strain SAVP1) GN=BMASAVP1_A1075
PE=3 SV=1
Length = 242
Score = 238 bits (606), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 118/243 (48%), Positives = 169/243 (69%), Gaps = 3/243 (1%)
Query: 1 MAGHSKWANIKRKKLIVDAKRGKICTRIMRELRVAINFGNNP-DTNIKLRLAIEKALDAN 59
MAGHSKWANIK KK DAKRGKI TR+++E++VA G ++N +LRLA++KA DAN
Sbjct: 1 MAGHSKWANIKHKKAAADAKRGKIWTRLIKEIQVAARLGGGDVNSNPRLRLAVDKAADAN 60
Query: 60 IPKNNIFRAIQKNNSNIKNENINYIEVRYEGYSVNGAAIIVDCITNNRMRTVSNIRNIFN 119
+PK+N+ RAI + + NY E+RYEGY + GAAIIVD +T+NR RTV+ +R+ F+
Sbjct: 61 MPKDNVKRAIDRGVGGA--DGANYEEIRYEGYGIGGAAIIVDTLTDNRTRTVAEVRHAFS 118
Query: 120 KNGGNLSKEGSVLFMFKHCGQLLFLPNTKKNTLLDLALEKGAEDFLIDKDNKITIITSPS 179
K GGN+ +GSV FMF H GQ LF P T ++ L++ ALE GA D + D I ++
Sbjct: 119 KFGGNMGTDGSVAFMFDHVGQFLFAPGTSEDALMEAALEAGANDVNTNDDGSIEVLCDWQ 178
Query: 180 KFIEIKNSLEMTGFKAESSGIVMRPYTNIVFKDGEAIKLQKLLNELKKLHDVKKVYTNAL 239
+F ++K++LE GFKAE + + M+P + F +A+K+QKLL+ L+ L DV++VYTNA+
Sbjct: 179 EFSKVKDALEAAGFKAELAEVTMKPQNEVDFTGEDAVKMQKLLDALENLDDVQEVYTNAV 238
Query: 240 IFD 242
+ +
Sbjct: 239 VVE 241
>sp|A3MI47|Y2858_BURM7 Probable transcriptional regulatory protein BMA10247_0358
OS=Burkholderia mallei (strain NCTC 10247)
GN=BMA10247_0358 PE=3 SV=1
Length = 242
Score = 238 bits (606), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 118/243 (48%), Positives = 169/243 (69%), Gaps = 3/243 (1%)
Query: 1 MAGHSKWANIKRKKLIVDAKRGKICTRIMRELRVAINFGNNP-DTNIKLRLAIEKALDAN 59
MAGHSKWANIK KK DAKRGKI TR+++E++VA G ++N +LRLA++KA DAN
Sbjct: 1 MAGHSKWANIKHKKAAADAKRGKIWTRLIKEIQVAARLGGGDVNSNPRLRLAVDKAADAN 60
Query: 60 IPKNNIFRAIQKNNSNIKNENINYIEVRYEGYSVNGAAIIVDCITNNRMRTVSNIRNIFN 119
+PK+N+ RAI + + NY E+RYEGY + GAAIIVD +T+NR RTV+ +R+ F+
Sbjct: 61 MPKDNVKRAIDRGVGGA--DGANYEEIRYEGYGIGGAAIIVDTLTDNRTRTVAEVRHAFS 118
Query: 120 KNGGNLSKEGSVLFMFKHCGQLLFLPNTKKNTLLDLALEKGAEDFLIDKDNKITIITSPS 179
K GGN+ +GSV FMF H GQ LF P T ++ L++ ALE GA D + D I ++
Sbjct: 119 KFGGNMGTDGSVAFMFDHVGQFLFAPGTSEDALMEAALEAGANDVNTNDDGSIEVLCDWQ 178
Query: 180 KFIEIKNSLEMTGFKAESSGIVMRPYTNIVFKDGEAIKLQKLLNELKKLHDVKKVYTNAL 239
+F ++K++LE GFKAE + + M+P + F +A+K+QKLL+ L+ L DV++VYTNA+
Sbjct: 179 EFSKVKDALEAAGFKAELAEVTMKPQNEVDFTGEDAVKMQKLLDALENLDDVQEVYTNAV 238
Query: 240 IFD 242
+ +
Sbjct: 239 VVE 241
>sp|Q62IJ0|Y1884_BURMA Probable transcriptional regulatory protein BMA1884 OS=Burkholderia
mallei (strain ATCC 23344) GN=BMA1884 PE=3 SV=1
Length = 242
Score = 238 bits (606), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 118/243 (48%), Positives = 169/243 (69%), Gaps = 3/243 (1%)
Query: 1 MAGHSKWANIKRKKLIVDAKRGKICTRIMRELRVAINFGNNP-DTNIKLRLAIEKALDAN 59
MAGHSKWANIK KK DAKRGKI TR+++E++VA G ++N +LRLA++KA DAN
Sbjct: 1 MAGHSKWANIKHKKAAADAKRGKIWTRLIKEIQVAARLGGGDVNSNPRLRLAVDKAADAN 60
Query: 60 IPKNNIFRAIQKNNSNIKNENINYIEVRYEGYSVNGAAIIVDCITNNRMRTVSNIRNIFN 119
+PK+N+ RAI + + NY E+RYEGY + GAAIIVD +T+NR RTV+ +R+ F+
Sbjct: 61 MPKDNVKRAIDRGVGGA--DGANYEEIRYEGYGIGGAAIIVDTLTDNRTRTVAEVRHAFS 118
Query: 120 KNGGNLSKEGSVLFMFKHCGQLLFLPNTKKNTLLDLALEKGAEDFLIDKDNKITIITSPS 179
K GGN+ +GSV FMF H GQ LF P T ++ L++ ALE GA D + D I ++
Sbjct: 119 KFGGNMGTDGSVAFMFDHVGQFLFAPGTSEDALMEAALEAGANDVNTNDDGSIEVLCDWQ 178
Query: 180 KFIEIKNSLEMTGFKAESSGIVMRPYTNIVFKDGEAIKLQKLLNELKKLHDVKKVYTNAL 239
+F ++K++LE GFKAE + + M+P + F +A+K+QKLL+ L+ L DV++VYTNA+
Sbjct: 179 EFSKVKDALEAAGFKAELAEVTMKPQNEVDFTGEDAVKMQKLLDALENLDDVQEVYTNAV 238
Query: 240 IFD 242
+ +
Sbjct: 239 VVE 241
>sp|Q3JUF8|Y1385_BURP1 Probable transcriptional regulatory protein BURPS1710b_1385
OS=Burkholderia pseudomallei (strain 1710b)
GN=BURPS1710b_1385 PE=3 SV=1
Length = 242
Score = 238 bits (606), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 118/243 (48%), Positives = 169/243 (69%), Gaps = 3/243 (1%)
Query: 1 MAGHSKWANIKRKKLIVDAKRGKICTRIMRELRVAINFGNNP-DTNIKLRLAIEKALDAN 59
MAGHSKWANIK KK DAKRGKI TR+++E++VA G ++N +LRLA++KA DAN
Sbjct: 1 MAGHSKWANIKHKKAAADAKRGKIWTRLIKEIQVAARLGGGDVNSNPRLRLAVDKAADAN 60
Query: 60 IPKNNIFRAIQKNNSNIKNENINYIEVRYEGYSVNGAAIIVDCITNNRMRTVSNIRNIFN 119
+PK+N+ RAI + + NY E+RYEGY + GAAIIVD +T+NR RTV+ +R+ F+
Sbjct: 61 MPKDNVKRAIDRGVGGA--DGANYEEIRYEGYGIGGAAIIVDTLTDNRTRTVAEVRHAFS 118
Query: 120 KNGGNLSKEGSVLFMFKHCGQLLFLPNTKKNTLLDLALEKGAEDFLIDKDNKITIITSPS 179
K GGN+ +GSV FMF H GQ LF P T ++ L++ ALE GA D + D I ++
Sbjct: 119 KFGGNMGTDGSVAFMFDHVGQFLFAPGTSEDALMEAALEAGANDVNTNDDGSIEVLCDWQ 178
Query: 180 KFIEIKNSLEMTGFKAESSGIVMRPYTNIVFKDGEAIKLQKLLNELKKLHDVKKVYTNAL 239
+F ++K++LE GFKAE + + M+P + F +A+K+QKLL+ L+ L DV++VYTNA+
Sbjct: 179 EFSKVKDALEAAGFKAELAEVTMKPQNEVDFTGEDAVKMQKLLDALENLDDVQEVYTNAV 238
Query: 240 IFD 242
+ +
Sbjct: 239 VVE 241
>sp|A3NT48|Y1240_BURP0 Probable transcriptional regulatory protein BURPS1106A_1240
OS=Burkholderia pseudomallei (strain 1106a)
GN=BURPS1106A_1240 PE=3 SV=1
Length = 242
Score = 238 bits (606), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 118/243 (48%), Positives = 169/243 (69%), Gaps = 3/243 (1%)
Query: 1 MAGHSKWANIKRKKLIVDAKRGKICTRIMRELRVAINFGNNP-DTNIKLRLAIEKALDAN 59
MAGHSKWANIK KK DAKRGKI TR+++E++VA G ++N +LRLA++KA DAN
Sbjct: 1 MAGHSKWANIKHKKAAADAKRGKIWTRLIKEIQVAARLGGGDVNSNPRLRLAVDKAADAN 60
Query: 60 IPKNNIFRAIQKNNSNIKNENINYIEVRYEGYSVNGAAIIVDCITNNRMRTVSNIRNIFN 119
+PK+N+ RAI + + NY E+RYEGY + GAAIIVD +T+NR RTV+ +R+ F+
Sbjct: 61 MPKDNVKRAIDRGVGGA--DGANYEEIRYEGYGIGGAAIIVDTLTDNRTRTVAEVRHAFS 118
Query: 120 KNGGNLSKEGSVLFMFKHCGQLLFLPNTKKNTLLDLALEKGAEDFLIDKDNKITIITSPS 179
K GGN+ +GSV FMF H GQ LF P T ++ L++ ALE GA D + D I ++
Sbjct: 119 KFGGNMGTDGSVAFMFDHVGQFLFAPGTSEDALMEAALEAGANDVNTNDDGSIEVLCDWQ 178
Query: 180 KFIEIKNSLEMTGFKAESSGIVMRPYTNIVFKDGEAIKLQKLLNELKKLHDVKKVYTNAL 239
+F ++K++LE GFKAE + + M+P + F +A+K+QKLL+ L+ L DV++VYTNA+
Sbjct: 179 EFSKVKDALEAAGFKAELAEVTMKPQNEVDFTGEDAVKMQKLLDALENLDDVQEVYTNAV 238
Query: 240 IFD 242
+ +
Sbjct: 239 VVE 241
>sp|A3N7F9|Y1231_BURP6 Probable transcriptional regulatory protein BURPS668_1231
OS=Burkholderia pseudomallei (strain 668)
GN=BURPS668_1231 PE=3 SV=1
Length = 242
Score = 238 bits (606), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 118/243 (48%), Positives = 169/243 (69%), Gaps = 3/243 (1%)
Query: 1 MAGHSKWANIKRKKLIVDAKRGKICTRIMRELRVAINFGNNP-DTNIKLRLAIEKALDAN 59
MAGHSKWANIK KK DAKRGKI TR+++E++VA G ++N +LRLA++KA DAN
Sbjct: 1 MAGHSKWANIKHKKAAADAKRGKIWTRLIKEIQVAARLGGGDVNSNPRLRLAVDKAADAN 60
Query: 60 IPKNNIFRAIQKNNSNIKNENINYIEVRYEGYSVNGAAIIVDCITNNRMRTVSNIRNIFN 119
+PK+N+ RAI + + NY E+RYEGY + GAAIIVD +T+NR RTV+ +R+ F+
Sbjct: 61 MPKDNVKRAIDRGVGGA--DGANYEEIRYEGYGIGGAAIIVDTLTDNRTRTVAEVRHAFS 118
Query: 120 KNGGNLSKEGSVLFMFKHCGQLLFLPNTKKNTLLDLALEKGAEDFLIDKDNKITIITSPS 179
K GGN+ +GSV FMF H GQ LF P T ++ L++ ALE GA D + D I ++
Sbjct: 119 KFGGNMGTDGSVAFMFDHVGQFLFAPGTSEDALMEAALEAGANDVNTNDDGSIEVLCDWQ 178
Query: 180 KFIEIKNSLEMTGFKAESSGIVMRPYTNIVFKDGEAIKLQKLLNELKKLHDVKKVYTNAL 239
+F ++K++LE GFKAE + + M+P + F +A+K+QKLL+ L+ L DV++VYTNA+
Sbjct: 179 EFSKVKDALEAAGFKAELAEVTMKPQNEVDFTGEDAVKMQKLLDALENLDDVQEVYTNAV 238
Query: 240 IFD 242
+ +
Sbjct: 239 VVE 241
>sp|Q63VS9|Y1165_BURPS Probable transcriptional regulatory protein BPSL1165
OS=Burkholderia pseudomallei (strain K96243) GN=BPSL1165
PE=3 SV=1
Length = 242
Score = 238 bits (606), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 118/243 (48%), Positives = 169/243 (69%), Gaps = 3/243 (1%)
Query: 1 MAGHSKWANIKRKKLIVDAKRGKICTRIMRELRVAINFGNNP-DTNIKLRLAIEKALDAN 59
MAGHSKWANIK KK DAKRGKI TR+++E++VA G ++N +LRLA++KA DAN
Sbjct: 1 MAGHSKWANIKHKKAAADAKRGKIWTRLIKEIQVAARLGGGDVNSNPRLRLAVDKAADAN 60
Query: 60 IPKNNIFRAIQKNNSNIKNENINYIEVRYEGYSVNGAAIIVDCITNNRMRTVSNIRNIFN 119
+PK+N+ RAI + + NY E+RYEGY + GAAIIVD +T+NR RTV+ +R+ F+
Sbjct: 61 MPKDNVKRAIDRGVGGA--DGANYEEIRYEGYGIGGAAIIVDTLTDNRTRTVAEVRHAFS 118
Query: 120 KNGGNLSKEGSVLFMFKHCGQLLFLPNTKKNTLLDLALEKGAEDFLIDKDNKITIITSPS 179
K GGN+ +GSV FMF H GQ LF P T ++ L++ ALE GA D + D I ++
Sbjct: 119 KFGGNMGTDGSVAFMFDHVGQFLFAPGTSEDALMEAALEAGANDVNTNDDGSIEVLCDWQ 178
Query: 180 KFIEIKNSLEMTGFKAESSGIVMRPYTNIVFKDGEAIKLQKLLNELKKLHDVKKVYTNAL 239
+F ++K++LE GFKAE + + M+P + F +A+K+QKLL+ L+ L DV++VYTNA+
Sbjct: 179 EFSKVKDALEAAGFKAELAEVTMKPQNEVDFTGEDAVKMQKLLDALENLDDVQEVYTNAV 238
Query: 240 IFD 242
+ +
Sbjct: 239 VVE 241
>sp|B4E5R6|Y2348_BURCJ Probable transcriptional regulatory protein BceJ2315_23480
OS=Burkholderia cepacia (strain J2315 / LMG 16656)
GN=BceJ2315_23480 PE=3 SV=1
Length = 242
Score = 236 bits (602), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 119/243 (48%), Positives = 166/243 (68%), Gaps = 3/243 (1%)
Query: 1 MAGHSKWANIKRKKLIVDAKRGKICTRIMRELRVAINFGNNP-DTNIKLRLAIEKALDAN 59
MAGHSKWANIK KK DAKRGKI TR+++E++VA G ++N +LRLA++KA DAN
Sbjct: 1 MAGHSKWANIKHKKAAADAKRGKIWTRLIKEIQVAARLGGGDVNSNPRLRLAVDKAADAN 60
Query: 60 IPKNNIFRAIQKNNSNIKNENINYIEVRYEGYSVNGAAIIVDCITNNRMRTVSNIRNIFN 119
+PK+N+ RAI + + NY E+RYEGY ++GAAIIVD +T+NR RTV+ +R+ F+
Sbjct: 61 MPKDNVKRAIDRGVGGA--DGANYEEIRYEGYGISGAAIIVDTLTDNRTRTVAEVRHAFS 118
Query: 120 KNGGNLSKEGSVLFMFKHCGQLLFLPNTKKNTLLDLALEKGAEDFLIDKDNKITIITSPS 179
K GGN+ +GSV FMF H GQ LF P T ++ L++ ALE GA D + D I ++
Sbjct: 119 KFGGNMGTDGSVAFMFDHVGQFLFAPGTSEDALMEAALEAGANDVNTNDDGSIEVLCDWQ 178
Query: 180 KFIEIKNSLEMTGFKAESSGIVMRPYTNIVFKDGEAIKLQKLLNELKKLHDVKKVYTNAL 239
F +K++LE GFKAE + + M+P + F +A K+QKLL+ L+ L DV+ VYTNA+
Sbjct: 179 AFSAVKDALEAAGFKAELAEVTMKPQNEVEFTGDDAAKMQKLLDALENLDDVQDVYTNAV 238
Query: 240 IFD 242
I +
Sbjct: 239 IVE 241
>sp|B1JW41|Y2317_BURCC Probable transcriptional regulatory protein Bcenmc03_2317
OS=Burkholderia cenocepacia (strain MC0-3)
GN=Bcenmc03_2317 PE=3 SV=1
Length = 242
Score = 236 bits (602), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 119/243 (48%), Positives = 166/243 (68%), Gaps = 3/243 (1%)
Query: 1 MAGHSKWANIKRKKLIVDAKRGKICTRIMRELRVAINFGNNP-DTNIKLRLAIEKALDAN 59
MAGHSKWANIK KK DAKRGKI TR+++E++VA G ++N +LRLA++KA DAN
Sbjct: 1 MAGHSKWANIKHKKAAADAKRGKIWTRLIKEIQVAARLGGGDVNSNPRLRLAVDKAADAN 60
Query: 60 IPKNNIFRAIQKNNSNIKNENINYIEVRYEGYSVNGAAIIVDCITNNRMRTVSNIRNIFN 119
+PK+N+ RAI + + NY E+RYEGY ++GAAIIVD +T+NR RTV+ +R+ F+
Sbjct: 61 MPKDNVKRAIDRGVGGA--DGANYEEIRYEGYGISGAAIIVDTLTDNRTRTVAEVRHAFS 118
Query: 120 KNGGNLSKEGSVLFMFKHCGQLLFLPNTKKNTLLDLALEKGAEDFLIDKDNKITIITSPS 179
K GGN+ +GSV FMF H GQ LF P T ++ L++ ALE GA D + D I ++
Sbjct: 119 KFGGNMGTDGSVAFMFDHVGQFLFAPGTSEDALMEAALEAGANDVNTNDDGSIEVLCDWQ 178
Query: 180 KFIEIKNSLEMTGFKAESSGIVMRPYTNIVFKDGEAIKLQKLLNELKKLHDVKKVYTNAL 239
F +K++LE GFKAE + + M+P + F +A K+QKLL+ L+ L DV+ VYTNA+
Sbjct: 179 AFSAVKDALEAAGFKAELAEVTMKPQNEVEFTGDDAAKMQKLLDALENLDDVQDVYTNAV 238
Query: 240 IFD 242
I +
Sbjct: 239 IVE 241
>sp|A0K968|Y2294_BURCH Probable transcriptional regulatory protein Bcen2424_2294
OS=Burkholderia cenocepacia (strain HI2424)
GN=Bcen2424_2294 PE=3 SV=1
Length = 242
Score = 236 bits (602), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 119/243 (48%), Positives = 166/243 (68%), Gaps = 3/243 (1%)
Query: 1 MAGHSKWANIKRKKLIVDAKRGKICTRIMRELRVAINFGNNP-DTNIKLRLAIEKALDAN 59
MAGHSKWANIK KK DAKRGKI TR+++E++VA G ++N +LRLA++KA DAN
Sbjct: 1 MAGHSKWANIKHKKAAADAKRGKIWTRLIKEIQVAARLGGGDVNSNPRLRLAVDKAADAN 60
Query: 60 IPKNNIFRAIQKNNSNIKNENINYIEVRYEGYSVNGAAIIVDCITNNRMRTVSNIRNIFN 119
+PK+N+ RAI + + NY E+RYEGY ++GAAIIVD +T+NR RTV+ +R+ F+
Sbjct: 61 MPKDNVKRAIDRGVGGA--DGANYEEIRYEGYGISGAAIIVDTLTDNRTRTVAEVRHAFS 118
Query: 120 KNGGNLSKEGSVLFMFKHCGQLLFLPNTKKNTLLDLALEKGAEDFLIDKDNKITIITSPS 179
K GGN+ +GSV FMF H GQ LF P T ++ L++ ALE GA D + D I ++
Sbjct: 119 KFGGNMGTDGSVAFMFDHVGQFLFAPGTSEDALMEAALEAGANDVNTNDDGSIEVLCDWQ 178
Query: 180 KFIEIKNSLEMTGFKAESSGIVMRPYTNIVFKDGEAIKLQKLLNELKKLHDVKKVYTNAL 239
F +K++LE GFKAE + + M+P + F +A K+QKLL+ L+ L DV+ VYTNA+
Sbjct: 179 AFSAVKDALEAAGFKAELAEVTMKPQNEVEFTGDDAAKMQKLLDALENLDDVQDVYTNAV 238
Query: 240 IFD 242
I +
Sbjct: 239 IVE 241
>sp|Q1BUW9|Y1682_BURCA Probable transcriptional regulatory protein Bcen_1682
OS=Burkholderia cenocepacia (strain AU 1054)
GN=Bcen_1682 PE=3 SV=1
Length = 242
Score = 236 bits (602), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 119/243 (48%), Positives = 166/243 (68%), Gaps = 3/243 (1%)
Query: 1 MAGHSKWANIKRKKLIVDAKRGKICTRIMRELRVAINFGNNP-DTNIKLRLAIEKALDAN 59
MAGHSKWANIK KK DAKRGKI TR+++E++VA G ++N +LRLA++KA DAN
Sbjct: 1 MAGHSKWANIKHKKAAADAKRGKIWTRLIKEIQVAARLGGGDVNSNPRLRLAVDKAADAN 60
Query: 60 IPKNNIFRAIQKNNSNIKNENINYIEVRYEGYSVNGAAIIVDCITNNRMRTVSNIRNIFN 119
+PK+N+ RAI + + NY E+RYEGY ++GAAIIVD +T+NR RTV+ +R+ F+
Sbjct: 61 MPKDNVKRAIDRGVGGA--DGANYEEIRYEGYGISGAAIIVDTLTDNRTRTVAEVRHAFS 118
Query: 120 KNGGNLSKEGSVLFMFKHCGQLLFLPNTKKNTLLDLALEKGAEDFLIDKDNKITIITSPS 179
K GGN+ +GSV FMF H GQ LF P T ++ L++ ALE GA D + D I ++
Sbjct: 119 KFGGNMGTDGSVAFMFDHVGQFLFAPGTSEDALMEAALEAGANDVNTNDDGSIEVLCDWQ 178
Query: 180 KFIEIKNSLEMTGFKAESSGIVMRPYTNIVFKDGEAIKLQKLLNELKKLHDVKKVYTNAL 239
F +K++LE GFKAE + + M+P + F +A K+QKLL+ L+ L DV+ VYTNA+
Sbjct: 179 AFSAVKDALEAAGFKAELAEVTMKPQNEVEFTGDDAAKMQKLLDALENLDDVQDVYTNAV 238
Query: 240 IFD 242
I +
Sbjct: 239 IVE 241
>sp|Q39EA1|Y5621_BURS3 Probable transcriptional regulatory protein Bcep18194_A5621
OS=Burkholderia sp. (strain 383) GN=Bcep18194_A5621 PE=3
SV=1
Length = 242
Score = 236 bits (601), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 119/243 (48%), Positives = 166/243 (68%), Gaps = 3/243 (1%)
Query: 1 MAGHSKWANIKRKKLIVDAKRGKICTRIMRELRVAINFGNNP-DTNIKLRLAIEKALDAN 59
MAGHSKWANIK KK DAKRGKI TR+++E++VA G ++N +LRLA++KA DAN
Sbjct: 1 MAGHSKWANIKHKKAAADAKRGKIWTRLIKEIQVAARLGGGDVNSNPRLRLAVDKAADAN 60
Query: 60 IPKNNIFRAIQKNNSNIKNENINYIEVRYEGYSVNGAAIIVDCITNNRMRTVSNIRNIFN 119
+PK+N+ RAI + + NY E+RYEGY ++GAAIIVD +T+NR RTV+ +R+ F+
Sbjct: 61 MPKDNVKRAIDRGVGGA--DGANYEEIRYEGYGISGAAIIVDTLTDNRTRTVAEVRHAFS 118
Query: 120 KNGGNLSKEGSVLFMFKHCGQLLFLPNTKKNTLLDLALEKGAEDFLIDKDNKITIITSPS 179
K GGN+ +GSV FMF H GQ LF P T ++ L++ ALE GA D + D I ++
Sbjct: 119 KFGGNMGTDGSVAFMFDHVGQFLFAPGTSEDALMEAALEAGANDVNTNDDGSIEVLCDWQ 178
Query: 180 KFIEIKNSLEMTGFKAESSGIVMRPYTNIVFKDGEAIKLQKLLNELKKLHDVKKVYTNAL 239
F +K++LE GFKAE + + M+P + F +A K+QKLL+ L+ L DV+ VYTNA+
Sbjct: 179 AFSAVKDALEAGGFKAELAEVTMKPQNEVEFTGDDAAKMQKLLDALENLDDVQDVYTNAV 238
Query: 240 IFD 242
I +
Sbjct: 239 IVE 241
>sp|A1W753|Y1898_ACISJ Probable transcriptional regulatory protein Ajs_1898 OS=Acidovorax
sp. (strain JS42) GN=Ajs_1898 PE=3 SV=1
Length = 239
Score = 233 bits (593), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 109/239 (45%), Positives = 162/239 (67%), Gaps = 3/239 (1%)
Query: 1 MAGHSKWANIKRKKLIVDAKRGKICTRIMRELRVAI-NFGNNPDTNIKLRLAIEKALDAN 59
MAGHSKWANI+ +K D KRGKI TRI+RE+ VA G +P N +LRLAI+KA AN
Sbjct: 1 MAGHSKWANIQHRKGRQDEKRGKIWTRIIREITVAARTGGGDPSANPRLRLAIDKAKAAN 60
Query: 60 IPKNNIFRAIQKNNSNIKNENINYIEVRYEGYSVNGAAIIVDCITNNRMRTVSNIRNIFN 119
+P + I I K + + E ++Y E+RYEGY + GAAIIVD +T+NR+RTV+ +R+ F+
Sbjct: 61 MPADRIKYNIDKASGTL--EGVSYEEIRYEGYGIGGAAIIVDTMTDNRVRTVAEVRHAFS 118
Query: 120 KNGGNLSKEGSVLFMFKHCGQLLFLPNTKKNTLLDLALEKGAEDFLIDKDNKITIITSPS 179
K GGN+ EGSV F FK+ GQ++F P T ++ ++++ALE GAED + D + I ++T+P
Sbjct: 119 KYGGNMGTEGSVAFQFKNVGQIIFAPGTSEDKVMEVALEAGAEDVITDDEGAIEVLTAPG 178
Query: 180 KFIEIKNSLEMTGFKAESSGIVMRPYTNIVFKDGEAIKLQKLLNELKKLHDVKKVYTNA 238
F ++++L G + E + + MRP I + + ++QKLL+ ++ L DV++VY NA
Sbjct: 179 DFEAVRDALGAAGLQPEVAEVTMRPENTIALEGDDVARMQKLLDMIEDLDDVQEVYHNA 237
>sp|Q1GYR5|Y2355_METFK Probable transcriptional regulatory protein Mfla_2355
OS=Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875) GN=Mfla_2355 PE=3 SV=1
Length = 241
Score = 231 bits (589), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 110/241 (45%), Positives = 167/241 (69%), Gaps = 3/241 (1%)
Query: 1 MAGHSKWANIKRKKLIVDAKRGKICTRIMRELRVAINFGN-NPDTNIKLRLAIEKALDAN 59
MAGHSKWANI+ +K DAKRGKI T++++E+ V+ G + + N +LR A+ +A + N
Sbjct: 1 MAGHSKWANIQHRKGRQDAKRGKIFTKLIKEITVSARMGGGDVNFNPRLRAAVAEAKEQN 60
Query: 60 IPKNNIFRAIQKNNSNIKNENINYIEVRYEGYSVNGAAIIVDCITNNRMRTVSNIRNIFN 119
+P NI RAI++ + E +NY E+RYEGY +NGAA+I+DC+T+N+ R V+++R++ +
Sbjct: 61 MPAENIIRAIKRGTGEL--EGVNYEEIRYEGYGINGAALIIDCLTDNKQRAVADVRHVLS 118
Query: 120 KNGGNLSKEGSVLFMFKHCGQLLFLPNTKKNTLLDLALEKGAEDFLIDKDNKITIITSPS 179
K+GGNL +G V FMFKHCG L+F P T ++ +++ ALE GAED + D+D I +IT+P
Sbjct: 119 KHGGNLGTDGCVAFMFKHCGVLVFEPGTSEDQVMEAALEAGAEDVITDEDGSIEVITAPG 178
Query: 180 KFIEIKNSLEMTGFKAESSGIVMRPYTNIVFKDGEAIKLQKLLNELKKLHDVKKVYTNAL 239
F +K +LE G K + + M+P VF + +K+QKLL+ L+ L DV++VYT A+
Sbjct: 179 DFTAVKEALEAAGLKPVLAEVTMKPDNETVFSGEDGVKMQKLLDALEDLDDVQEVYTTAV 238
Query: 240 I 240
I
Sbjct: 239 I 239
>sp|Q3SGS9|Y2215_THIDA Probable transcriptional regulatory protein Tbd_2215
OS=Thiobacillus denitrificans (strain ATCC 25259)
GN=Tbd_2215 PE=3 SV=1
Length = 243
Score = 231 bits (588), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 108/245 (44%), Positives = 161/245 (65%), Gaps = 5/245 (2%)
Query: 1 MAGHSKWANIKRKKLIVDAKRGKICTRIMRELRVAINFGN-NPDTNIKLRLAIEKALDAN 59
MAGHSKWANI+ +K DAKRGKI T++++E+ VA G +P N +LRLAIEK +
Sbjct: 1 MAGHSKWANIQHRKGRQDAKRGKIFTKLIKEITVAAKMGGGDPAMNPRLRLAIEKGKAES 60
Query: 60 IPKNNIFRAIQKNNSNIKNENINYIEVRYEGYSVNGAAIIVDCITNNRMRTVSNIRNIFN 119
+PK+NI AI++ + E +NY E RYEGY + G A++VDC+T+N+ RTV+++R+ F
Sbjct: 61 LPKDNIENAIKRGTGQL--EGVNYEEARYEGYGIGGVAVMVDCLTDNKTRTVADVRHAFT 118
Query: 120 KNGGNLSKEGSVLFMFKHCGQLLFLPNTKKNTLLDLALEKGAEDFLIDKDNKITIITSPS 179
K+GGN+ +G V F FKH GQ++ P + +++ AL+ GA+D + + D I ++TSP
Sbjct: 119 KHGGNMGTDGCVAFQFKHVGQIVLEPGASEEAVMEAALDAGADDVIPNDDGSIEVLTSPD 178
Query: 180 K--FIEIKNSLEMTGFKAESSGIVMRPYTNIVFKDGEAIKLQKLLNELKKLHDVKKVYTN 237
F +K +LE GFK + I MRP +A K+QK+L+ L+ L DV++VYTN
Sbjct: 179 PKAFEAVKEALEKAGFKPAVAEITMRPEAETELAGDDAAKMQKILDALESLDDVQEVYTN 238
Query: 238 ALIFD 242
A++ D
Sbjct: 239 AVLPD 243
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,093,338
Number of Sequences: 539616
Number of extensions: 3680955
Number of successful extensions: 15884
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 69
Number of HSP's that attempted gapping in prelim test: 13019
Number of HSP's gapped (non-prelim): 1087
length of query: 242
length of database: 191,569,459
effective HSP length: 114
effective length of query: 128
effective length of database: 130,053,235
effective search space: 16646814080
effective search space used: 16646814080
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)