RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy8855
(200 letters)
>2z7e_A ISCU protein, NIFU-like protein; iron-sulfur cluster, iron,
biosynthesis, [2Fe-2S], asymmetric trimer, three
conserved Cys; 2.30A {Aquifex aeolicus}
Length = 157
Score = 163 bits (413), Expect = 8e-52
Identities = 55/98 (56%), Positives = 67/98 (68%), Gaps = 4/98 (4%)
Query: 1 MSYSEKVLDHYENPRNVGVFEKNDNTVGTGMVGAPACGDVMKLQIKVN-KNGVITDAKFK 59
Y+EKVLDH+ NPRNVGV E + G G G PACG M IKVN +N VI D +FK
Sbjct: 3 FEYNEKVLDHFLNPRNVGVLEDAN---GVGQCGNPACGAAMLFTIKVNPENDVIEDVRFK 59
Query: 60 TYGCGSAIASSSLVTEWVKGKTLDEAMSIKNTDIAEEL 97
T+GCGSAIA SS++TE VKGK + A+++ DI EEL
Sbjct: 60 TFGCGSAIAVSSMLTEMVKGKPIQYALNLTYKDIFEEL 97
>3lvl_A NIFU-like protein; protein-protein complex, structural genomics,
montreal-kings bacterial structural genomics
initiative, BSGI; HET: PLP; 3.00A {Escherichia coli}
PDB: 2l4x_A 2kqk_A 1q48_A 1r9p_A 1wfz_A
Length = 129
Score = 161 bits (408), Expect = 2e-51
Identities = 80/95 (84%), Positives = 87/95 (91%)
Query: 3 YSEKVLDHYENPRNVGVFEKNDNTVGTGMVGAPACGDVMKLQIKVNKNGVITDAKFKTYG 62
YSEKV+DHYENPRNVG F+ ND VG+GMVGAPACGDVMKLQIKVN G+I DA+FKTYG
Sbjct: 4 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYG 63
Query: 63 CGSAIASSSLVTEWVKGKTLDEAMSIKNTDIAEEL 97
CGSAIASSSLVTEWVKGK+LDEA +IKNTDIAEEL
Sbjct: 64 CGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEEL 98
>4eb5_C NIFU protein (NIFU-1); scaffold, transferase-metal binding protein
complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus}
PDB: 4eb7_C*
Length = 153
Score = 155 bits (394), Expect = 6e-49
Identities = 56/128 (43%), Positives = 73/128 (57%), Gaps = 21/128 (16%)
Query: 3 YSEKVLDHYENPRNVGVFEKNDNTVGTGMVGAPACGDVMKLQIKVNKNGVITDAKFKTYG 62
YS+KV DH++NPRNVG E D G G VG P CGD+M + IKV + I D KF+T+G
Sbjct: 2 YSDKVFDHFQNPRNVGKIEDAD---GVGTVGNPVCGDLMTIYIKVK-DNRIEDIKFQTFG 57
Query: 63 CGSAIASSSLVTEWVKGKTLDEAMSIKNTDIAEELV---------------TKKAAKYIN 107
C +AIA+SS+ TE KGKT++EA+ I +AE L + A I
Sbjct: 58 CAAAIATSSMATEMAKGKTIEEALKITRDAVAEALGGLPKQKMHCSNLAADALRRA--IV 115
Query: 108 KYIQKRGK 115
Y +K GK
Sbjct: 116 DYFRKNGK 123
>1r94_A Protein YFHF; tetrameric, beta barrel, iron-sulfur cluster protein,
pseudo-symmetric motifs, metal transport; 2.30A
{Escherichia coli} SCOP: b.124.1.1 PDB: 1r95_A 1s98_A
Length = 118
Score = 153 bits (388), Expect = 2e-48
Identities = 55/115 (47%), Positives = 79/115 (68%), Gaps = 8/115 (6%)
Query: 86 MSIKNTDIAEELVTKKAAKYINKYIQKRGKGIGLRLGVYNRGCSGLSYKLEYVDEKRKED 145
MSI ++ AA +N ++ RGKG GLRLGV GCSG++Y LE+VDE ED
Sbjct: 1 MSIT--------LSDSAAARVNTFLANRGKGFGLRLGVRTSGCSGMAYVLEFVDEPTPED 52
Query: 146 QVFKLNGVQIFINEKDLLYFNGIELDFEFDGLNKGFKFKNPNIKNKCGCGKSFQI 200
VF+ GV++ ++ K L + +G +LDF +GLN+GFKF NPN+K++CGCG+SF++
Sbjct: 53 IVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFTNPNVKDECGCGESFKL 107
>2d2a_A SUFA protein; iron-sulfur cluster, iron, ISCA, YADR, metal
transport; 2.70A {Escherichia coli}
Length = 145
Score = 152 bits (387), Expect = 5e-48
Identities = 41/103 (39%), Positives = 68/103 (66%)
Query: 98 VTKKAAKYINKYIQKRGKGIGLRLGVYNRGCSGLSYKLEYVDEKRKEDQVFKLNGVQIFI 157
+T AA +I + + K+ +G+RLGV GC+G Y L+ V E K+D +F+ +G ++F+
Sbjct: 43 LTPAAAIHIRELVAKQPGMVGVRLGVKQTGCAGFGYVLDSVSEPDKDDLLFEHDGAKLFV 102
Query: 158 NEKDLLYFNGIELDFEFDGLNKGFKFKNPNIKNKCGCGKSFQI 200
+ + + +G E+DF +GLN+ FKF NP +N+CGCG+SF +
Sbjct: 103 PLQAMPFIDGTEVDFVREGLNQIFKFHNPKAQNECGCGESFGV 145
>1x0g_A ISCA; [2Fe-2S], biosynthesis, cyanobacteria, domain swapping, Fe- S
cluster, iron, iron-sulfur cluster protein, scaffold,
sulfur; 2.50A {Thermosynechococcus elongatus}
Length = 112
Score = 135 bits (341), Expect = 2e-41
Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 3/106 (2%)
Query: 98 VTKKAAKYINKYIQ---KRGKGIGLRLGVYNRGCSGLSYKLEYVDEKRKEDQVFKLNGVQ 154
+T A + + + +RG+ LR+ V C Y L V E + D + + G
Sbjct: 4 LTPAAIQELERLQTHGVRRGQAAILRIQVQPSECGDWRYDLALVAEPKPTDLLTQSQGWT 63
Query: 155 IFINEKDLLYFNGIELDFEFDGLNKGFKFKNPNIKNKCGCGKSFQI 200
I I + G+ +D+ D + F+F NPN CGCG +F++
Sbjct: 64 IAIAAEAAELLRGLRVDYIEDLMGGAFRFHNPNASQTCGCGMAFRV 109
>1su0_B NIFU like protein ISCU; structural genomics, BSGC structure
funded by NI protein structure initiative, PSI; 2.30A
{Streptococcus pyogenes} SCOP: d.224.1.2
Length = 159
Score = 133 bits (337), Expect = 3e-40
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 3 YSEKVLDHYENPRNVGVFEKNDNTVGTGMVGAPACGDVMKLQIKVNKNGVITDAKFKTYG 62
Y V DH + P + G + V + P CGDV+ L +K + I D F G
Sbjct: 10 YMAVVADHSKRPHHHGQLDG----VEAVQLNNPTCGDVISLTVKFD-EDKIEDIAFAGNG 64
Query: 63 CGSAIASSSLVTEWVKGKTLDEAMSIKNT 91
C + ASSS++T+ V GK+ +EA+++ +
Sbjct: 65 CTISTASSSMMTDAVIGKSKEEALALADI 93
>2qq4_A Iron-sulfur cluster biosynthesis protein ISCU; zinc binding,
iron-sulfur cluster binding, three conserved Cys, three
beta strands; 1.85A {Thermus thermophilus}
Length = 138
Score = 130 bits (329), Expect = 3e-39
Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Query: 3 YSEKVLDHYENPRNVGVFEKNDNTVGTGMVGAPACGDVMKLQIKVNKNGVITDAKFKTYG 62
Y E +LDHY++PRN GV + G P+CGD +++ + + I D +F+ G
Sbjct: 8 YREILLDHYQSPRNFGVLPQATKQAG---GMNPSCGDQVEVMVLLE-GDTIADIRFQGQG 63
Query: 63 CGSAIASSSLVTEWVKGKTLDEAMSIKNTDIAEEL 97
C + AS+SL+TE VKGK + EA+ + A +
Sbjct: 64 CAISTASASLMTEAVKGKKVAEALELSRKFQAMVV 98
>1xjs_A NIFU-like protein; SR17, structure, autostructure, iron-sulfur,
zinc, northeast structural genomics consortium, NESG;
NMR {Bacillus subtilis} SCOP: d.224.1.2 PDB: 2azh_A
Length = 147
Score = 124 bits (312), Expect = 1e-36
Identities = 31/89 (34%), Positives = 56/89 (62%), Gaps = 5/89 (5%)
Query: 3 YSEKVLDHYENPRNVGVFEKNDNTVGTGMVGAPACGDVMKLQIKVNKNGVITDAKFKTYG 62
Y + ++DHY+NPRN GV + + P CGD ++L +K++ ++ DAKF+ G
Sbjct: 11 YRQVIMDHYKNPRNKGVLNDSI----VVDMNNPTCGDRIRLTMKLD-GDIVEDAKFEGEG 65
Query: 63 CGSAIASSSLVTEWVKGKTLDEAMSIKNT 91
C ++AS+S++T+ +KGK ++ A+S+
Sbjct: 66 CSISMASASMMTQAIKGKDIETALSMSKI 94
>1nwb_A Hypothetical protein AQ_1857; QR6, structural genomics, protein
structure initiative, NESG, reduced dimensionality PSI;
NMR {Aquifex aeolicus} SCOP: b.124.1.1
Length = 124
Score = 116 bits (293), Expect = 6e-34
Identities = 40/104 (38%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
Query: 98 VTKKAAKYINKYIQKRG-KGIGLRLGVYNRGCSGLSYKLEYVDEKRKEDQVFKLNGVQIF 156
VT KA + I K Q+ + LR+ V GCSG Y + + D + D VF+ +GV++
Sbjct: 12 VTDKAVEEIKKVAQENNIENPILRIRVVPGGCSGFQYAMGFDDTVEEGDHVFEYDGVKVV 71
Query: 157 INEKDLLYFNGIELDFEFDGLNKGFKFKNPNIKNKCGCGKSFQI 200
I+ + Y NG ELD+ D + GF +NPN CGCG SF
Sbjct: 72 IDPFSMPYVNGAELDYVVDFMGGGFTIRNPNATGSCGCGSSFSC 115
>2k4z_A DSRR; ISCA/SUFA/HESB like fold, structural genomics, PSI-2, protein
structure initiative, northeast structural genomics
consortium, NESG; NMR {Allochromatium vinosum}
Length = 125
Score = 108 bits (273), Expect = 5e-31
Identities = 23/95 (24%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
Query: 98 VTKKAAKYINKYIQKRG-KGIGLRLGVYNRGCSGLSYKLEYVDEKRKEDQVFKLNGVQIF 156
+T AA+ + K ++ G +G+ LRL + Y++ + D+ ++D GV+I
Sbjct: 25 LTPAAAEQVLKAAKQGGTEGMCLRLAAGRNPDGSIDYRMGF-DDLTEDDIRLTSEGVEIV 83
Query: 157 INEKDLLYFNGIELDF-EFDGLNKGFKFKNPNIKN 190
I + + LD+ E + F F NP
Sbjct: 84 IAPDYVSLLDQTTLDYVELEPGQFHFIFLNPRDPT 118
>2apn_A Protein HI1723; HI1723 solution structure, structural genomics,
structure 2 function project, S2F, unknown function; NMR
{Haemophilus influenzae}
Length = 114
Score = 105 bits (265), Expect = 7e-30
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 3/105 (2%)
Query: 98 VTKKAAKYINKYIQKRGK-GIGLRLGVYNRGCSGLSYKLEYVDEKRKEDQVFKLNGVQIF 156
T AA + I + + LR+ + GCSG Y + ++ D + +GVQ+
Sbjct: 11 FTDAAANKVKSLISEEENTDLKLRVYITGGGCSGFQYGFTFDEKVNDGDLTIEKSGVQLV 70
Query: 157 INEKDLLYFNGIELDFEFDGLN-KGFKFKNPNIKNKCGCGKSFQI 200
I+ L Y G +D+ +GL F NPN + CGCG SF I
Sbjct: 71 IDPMSLQYLIGGTVDYT-EGLEGSRFTVNNPNATSTCGCGSSFSI 114
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 31.0 bits (69), Expect = 0.27
Identities = 18/135 (13%), Positives = 38/135 (28%), Gaps = 46/135 (34%)
Query: 67 IASSSLVTEWVKGKTLDEAMSIKNTDIAEELVTKKAAKYINKYIQKRGKGIGLRL-GVYN 125
I + L W + M + +L ++K+ K + + +Y
Sbjct: 387 IPTILLSLIWFDVIK-SDVM-----VVVNKLHKYSL-------VEKQPKESTISIPSIY- 432
Query: 126 RGCSGLSYKLEYVDEKRKEDQV---------FKLNGVQI---------FI--------NE 159
L K++ +E + F + + I +
Sbjct: 433 -----LELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHP 487
Query: 160 KDLLYFNGIELDFEF 174
+ + F + LDF F
Sbjct: 488 ERMTLFRMVFLDFRF 502
Score = 30.6 bits (68), Expect = 0.37
Identities = 32/209 (15%), Positives = 64/209 (30%), Gaps = 70/209 (33%)
Query: 1 MSYS-EKVLDHYENPRNVGVFEKN-DNTVGTGMVGAPACGDVMKLQIKVNKNGVITDAKF 58
Y + +L +E+ F N D C DV + +++ +
Sbjct: 14 HQYQYKDILSVFEDA-----FVDNFD------------CKDVQDMP-----KSILSKEEI 51
Query: 59 K-TYGCGSAIASSSLVTEWVKGKTLDEAMSIKNTDIAEELVT---KKAAKYINKYIQKRG 114
A++ + + W + K ++ ++ V + K++ I+
Sbjct: 52 DHIIMSKDAVSGTLRLF-WT--------LLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQ 102
Query: 115 KGIGLRLGVYNRGCSGLSYKLEYVDEKRKEDQVF-KLNGV---QIFINEKDLLYFNGIEL 170
+ + +Y E D ++QVF K N V Q ++ + L EL
Sbjct: 103 RQPSMMTRMYI----------EQRDRLYNDNQVFAKYN-VSRLQPYLKLRQALL----EL 147
Query: 171 DFEFDGLNKGFKFKNPNI--KNKCGCGKS 197
N+ G GK+
Sbjct: 148 R------------PAKNVLIDGVLGSGKT 164
Score = 26.7 bits (58), Expect = 6.9
Identities = 17/105 (16%), Positives = 32/105 (30%), Gaps = 31/105 (29%)
Query: 7 VLDHYENPRNVGVFEKNDNTVGTGMVGAPACGDVMKLQIKV-NKNGVITDAKFKTYGCGS 65
VL + +N + F + C +I + + +TD +
Sbjct: 249 VLLNVQNAKAWNAFNLS-------------C------KILLTTRFKQVTDF------LSA 283
Query: 66 AIASSSLVTEWVKGKTLDEAMSI--KNTDI-AEELVTKKAAKYIN 107
A + + T DE S+ K D ++L + N
Sbjct: 284 ATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDL--PREVLTTN 326
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna;
HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 29.9 bits (66), Expect = 0.33
Identities = 12/50 (24%), Positives = 15/50 (30%), Gaps = 23/50 (46%)
Query: 42 KLQIKVNKNGVITDAKFKTYGCGSAIASSSLVTEWVKGKTLDEAMSIKNT 91
K +K K A K Y SA A++IK T
Sbjct: 19 KQALK--K----LQASLKLYADDSA-----------------PALAIKAT 45
>2i1o_A Nicotinate phosphoribosyltransferase; ZIN ION, zinc finger M
structural genomics, PSI, protein structure initiative;
2.40A {Thermoplasma acidophilum} PDB: 1ytd_A* 1yte_A*
1ytk_A
Length = 398
Score = 28.4 bits (64), Expect = 1.5
Identities = 9/37 (24%), Positives = 11/37 (29%), Gaps = 4/37 (10%)
Query: 27 VGTGMVGAPACGDVMKLQIKVNKNGVITDAKFKTYGC 63
VGT + A M + V NG K
Sbjct: 297 VGTSISSAKPFDFAMDI---VEVNGKPE-TKRGKMSG 329
>2xgj_A ATP-dependent RNA helicase DOB1; hydrolase-RNA complex, hydrolase,
tramp, exosome, DEAD, nucleotide-binding; HET: ADP;
2.90A {Saccharomyces cerevisiae}
Length = 1010
Score = 28.2 bits (62), Expect = 2.2
Identities = 9/24 (37%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
Query: 72 LVTEWVKGKTLDEAMSIKNTDIAE 95
+V EW +G T + K TD+ E
Sbjct: 937 VVYEWCRGATFTQIC--KMTDVYE 958
>3l9o_A ATP-dependent RNA helicase DOB1; REC-A fold, winged-helix-turn-helix,
antiparallel-coiled-COI domain, ATP-binding, helicase,
hydrolase; 3.39A {Saccharomyces cerevisiae}
Length = 1108
Score = 28.3 bits (62), Expect = 2.3
Identities = 9/24 (37%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
Query: 72 LVTEWVKGKTLDEAMSIKNTDIAE 95
+V EW +G T + K TD+ E
Sbjct: 1035 VVYEWCRGATFTQIC--KMTDVYE 1056
>4a4z_A Antiviral helicase SKI2; hydrolase, ATPase, mRNA degradation,
exosome; HET: ANP; 2.40A {Saccharomyces cerevisiae} PDB:
4a4k_A
Length = 997
Score = 27.9 bits (61), Expect = 2.7
Identities = 8/24 (33%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
Query: 72 LVTEWVKGKTLDEAMSIKNTDIAE 95
+V EW +G + E M + + AE
Sbjct: 924 VVYEWARGLSFKEIM--EMSPEAE 945
>2i14_A Nicotinate-nucleotide pyrophosphorylase; ligand binding,
phosphoribosylpyrophosphate, Zn metal ION, structural
genomics, PSI; HET: PCP; 2.90A {Pyrococcus furiosus}
SCOP: c.1.17.1 d.41.2.1
Length = 395
Score = 27.6 bits (62), Expect = 3.2
Identities = 7/36 (19%), Positives = 10/36 (27%), Gaps = 4/36 (11%)
Query: 27 VGTGMVGAPACGDVMKLQIKVNKNGVITDAKFKTYG 62
VG + A + + V G AK
Sbjct: 294 VGGAIASAKPVDFALDI---VEVEGKPI-AKRGKLS 325
>2ftc_M Mitochondrial ribosomal protein L22 isoform A; mitochondrial
ribosome, large ribosomal subunit, ribosomal R ribosome;
12.10A {Bos taurus} PDB: 3iy9_M
Length = 110
Score = 25.9 bits (58), Expect = 4.2
Identities = 9/41 (21%), Positives = 21/41 (51%), Gaps = 8/41 (19%)
Query: 72 LVTEWVKGKTLDEAMSI-KNTDIAEELVTKKAAKYINKYIQ 111
+ + ++G ++D+A++ + D KK AK I + +
Sbjct: 15 YLAKLIRGMSIDQALAQLEFND-------KKGAKIIKEVLL 48
>3r8s_S 50S ribosomal protein L22; protein biosynthesis, RNA, tRNA,
transfer RNA, 23S ribosomal subunit, ribosome recycling
factor, RRF, ribosome; 3.00A {Escherichia coli} PDB:
1p85_Q 1p86_Q 1vs8_S 1vs6_S 2aw4_S 2awb_S 1vt2_S 2i2v_S
2j28_S 2i2t_S* 2qao_S* 2qba_S* 2qbc_S* 2qbe_S 2qbg_S
2qbi_S* 2qbk_S* 2qov_S 2qox_S 2qoz_S* ...
Length = 110
Score = 25.9 bits (58), Expect = 4.4
Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 8/41 (19%)
Query: 72 LVTEWVKGKTLDEAMSI-KNTDIAEELVTKKAAKYINKYIQ 111
LV + ++GK + +A+ I T KKAA + K ++
Sbjct: 19 LVADLIRGKKVSQALDILTYT-------NKKAAVLVKKVLE 52
>2ri0_A Glucosamine-6-phosphate deaminase; carbohydrate metabolism,; HET:
BTB; 1.60A {Streptococcus mutans} PDB: 2ri1_A*
Length = 234
Score = 26.4 bits (59), Expect = 5.4
Identities = 8/35 (22%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 85 AMSIKNTDIAEELVTKKAAKYINKYIQKRGKGIGL 119
+M E +K A + + + I K +GL
Sbjct: 1 SMKTIKVKNKTE-GSKVAFRMLEEEITFGAKTLGL 34
>1i4j_A 50S ribosomal protein L22; mutant, erythromycin resistance, RNA
binding, RNA binding protein; 1.80A {Thermus
thermophilus} SCOP: d.55.1.1 PDB: 1bxe_A 1giy_S 1ml5_s*
1vsa_Q 1vsp_Q 1yl3_S 2b66_W 2b9n_W 2b9p_W 2hgj_V 2hgq_V
2hgu_V 2j01_W 2j03_W 2jl6_W 2jl8_W 2v47_W 2v49_W 2wdi_W
2wdj_W ...
Length = 110
Score = 25.5 bits (57), Expect = 7.2
Identities = 12/41 (29%), Positives = 24/41 (58%), Gaps = 8/41 (19%)
Query: 72 LVTEWVKGKTLDEAMSI-KNTDIAEELVTKKAAKYINKYIQ 111
LV + ++GK+L+EA +I + T K+ A ++ K ++
Sbjct: 19 LVVDLIRGKSLEEARNILRYT-------NKRGAYFVAKVLE 52
>2a7o_A Huntingtin interacting protein B; SRI domain, SRI, HSRI, SET2,
HSET2, phosphoctd associating protein, SET2
RPB1-interacting domain, PCID, PCAP; NMR {Homo sapiens}
Length = 112
Score = 25.0 bits (54), Expect = 9.4
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Query: 81 TLDEAMSIKNTDIAE--ELVTKKAAKYINKYIQKRGK 115
E KN + E E V K +YI KY+QK G
Sbjct: 65 MNKELKYCKNPEDLECNENVKHKTKEYIKKYMQKFGA 101
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.316 0.137 0.398
Gapped
Lambda K H
0.267 0.0656 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 3,045,211
Number of extensions: 178760
Number of successful extensions: 583
Number of sequences better than 10.0: 1
Number of HSP's gapped: 570
Number of HSP's successfully gapped: 35
Length of query: 200
Length of database: 6,701,793
Length adjustment: 89
Effective length of query: 111
Effective length of database: 4,216,824
Effective search space: 468067464
Effective search space used: 468067464
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.1 bits)