Query psy8856
Match_columns 312
No_of_seqs 108 out of 1199
Neff 9.7
Searched_HMMs 29240
Date Fri Aug 16 21:07:01 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8856.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8856hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3b1n_A Ribokinase, putative; r 100.0 7E-50 2.4E-54 355.4 33.0 308 1-310 1-310 (326)
2 2pkf_A Adenosine kinase; trans 100.0 3.8E-49 1.3E-53 351.9 24.5 307 1-309 11-323 (334)
3 2c4e_A Sugar kinase MJ0406; tr 100.0 6.8E-48 2.3E-52 339.3 28.0 292 2-306 7-300 (302)
4 3ljs_A Fructokinase; fructokia 100.0 7.5E-47 2.6E-51 337.8 25.6 292 1-309 5-332 (338)
5 3ikh_A Carbohydrate kinase; tr 100.0 2.9E-47 9.9E-52 334.7 21.9 283 1-311 3-294 (299)
6 3ry7_A Ribokinase; transferase 100.0 2E-46 6.7E-51 330.3 26.0 284 1-301 3-303 (304)
7 3go6_A Ribokinase RBSK; phosph 100.0 3.9E-46 1.3E-50 329.0 27.8 279 1-306 20-305 (310)
8 2rbc_A Sugar kinase, AGR_C_456 100.0 8.3E-46 2.8E-50 331.3 29.0 290 1-307 30-330 (343)
9 3iq0_A Putative ribokinase II; 100.0 1.2E-45 4.2E-50 328.8 26.5 293 2-309 5-316 (330)
10 1rkd_A Ribokinase; carbohydrat 100.0 4.2E-45 1.5E-49 322.5 28.2 288 1-305 5-307 (309)
11 3hj6_A Fructokinase, FRK; fruc 100.0 5.5E-46 1.9E-50 330.7 21.7 287 1-304 22-326 (327)
12 3kzh_A Probable sugar kinase; 100.0 1.6E-45 5.4E-50 327.9 24.3 289 1-306 7-310 (328)
13 4du5_A PFKB; structural genomi 100.0 2.3E-45 8E-50 327.7 25.3 286 1-302 27-334 (336)
14 3pl2_A Sugar kinase, ribokinas 100.0 7E-45 2.4E-49 322.5 27.1 289 1-306 9-318 (319)
15 3h49_A Ribokinase; transferase 100.0 7E-45 2.4E-49 323.3 26.8 299 1-310 6-319 (325)
16 3ktn_A Carbohydrate kinase, PF 100.0 1.6E-44 5.6E-49 323.6 28.9 288 1-307 3-333 (346)
17 1v1a_A 2-keto-3-deoxygluconate 100.0 1.3E-44 4.3E-49 319.5 27.7 283 1-305 2-303 (309)
18 3bf5_A Ribokinase related prot 100.0 5.7E-45 1.9E-49 321.0 21.4 282 1-310 21-305 (306)
19 2v78_A Fructokinase; transfera 100.0 3.1E-44 1.1E-48 317.5 26.0 285 1-306 2-311 (313)
20 2fv7_A Ribokinase; structural 100.0 1.7E-44 5.9E-49 321.5 24.5 285 1-301 25-328 (331)
21 4e3a_A Sugar kinase protein; s 100.0 1.6E-44 5.6E-49 323.9 23.8 299 2-301 27-348 (352)
22 3ewm_A Uncharacterized sugar k 100.0 4E-44 1.4E-48 316.8 25.2 281 1-306 2-301 (313)
23 1tyy_A Putative sugar kinase; 100.0 5.1E-44 1.7E-48 319.4 24.7 283 2-307 26-331 (339)
24 2qcv_A Putative 5-dehydro-2-de 100.0 5.5E-43 1.9E-47 312.0 30.4 292 1-307 12-327 (332)
25 1vm7_A Ribokinase; TM0960, str 100.0 4.9E-43 1.7E-47 309.4 29.0 282 1-305 15-310 (311)
26 2dcn_A Hypothetical fructokina 100.0 2.1E-43 7.3E-48 311.9 25.0 285 1-306 2-309 (311)
27 3ie7_A LIN2199 protein; phosph 100.0 3.5E-43 1.2E-47 311.7 26.2 282 1-308 3-306 (320)
28 3vas_A Putative adenosine kina 100.0 8.1E-44 2.8E-48 321.5 20.2 295 2-300 26-365 (370)
29 2nwh_A AGR_C_3442P, carbohydra 100.0 1.7E-43 5.8E-48 313.3 21.6 288 2-305 5-307 (317)
30 2jg1_A Tagatose-6-phosphate ki 100.0 2E-42 6.9E-47 308.0 27.4 279 1-306 21-325 (330)
31 3umo_A 6-phosphofructokinase i 100.0 4E-42 1.4E-46 303.5 28.4 278 3-306 5-307 (309)
32 3uq6_A Adenosine kinase, putat 100.0 2.4E-43 8.2E-48 318.8 19.8 299 3-304 29-371 (372)
33 2f02_A Tagatose-6-phosphate ki 100.0 5.8E-42 2E-46 304.2 27.7 279 1-306 3-308 (323)
34 4gm6_A PFKB family carbohydrat 100.0 1.5E-42 5E-47 311.5 23.8 289 2-307 26-346 (351)
35 3kd6_A Carbohydrate kinase, PF 100.0 2.5E-42 8.7E-47 305.2 24.4 284 1-307 3-299 (313)
36 3otx_A Adenosine kinase, putat 100.0 9.7E-43 3.3E-47 312.2 21.3 291 1-296 8-342 (347)
37 3lhx_A Ketodeoxygluconokinase; 100.0 1.3E-42 4.6E-47 307.8 20.2 270 2-297 6-308 (319)
38 3loo_A Anopheles gambiae adeno 100.0 6.9E-43 2.4E-47 315.1 18.5 290 2-296 25-358 (365)
39 4e69_A 2-dehydro-3-deoxyglucon 100.0 7.1E-42 2.4E-46 304.1 24.6 268 1-291 24-317 (328)
40 2afb_A 2-keto-3-deoxygluconate 100.0 4.2E-41 1.4E-45 302.1 29.5 286 1-305 13-343 (351)
41 2ajr_A Sugar kinase, PFKB fami 100.0 5.3E-42 1.8E-46 305.4 22.3 280 1-306 13-325 (331)
42 3cqd_A 6-phosphofructokinase i 100.0 7.3E-41 2.5E-45 295.4 28.9 278 2-306 3-307 (309)
43 2abq_A Fructose 1-phosphate ki 100.0 1.1E-40 3.8E-45 293.8 28.4 277 1-307 1-299 (306)
44 2jg5_A Fructose 1-phosphate ki 100.0 4.5E-41 1.5E-45 296.3 25.8 279 1-309 1-301 (306)
45 4e84_A D-beta-D-heptose 7-phos 100.0 1.5E-41 5.2E-46 304.5 21.8 276 1-300 54-351 (352)
46 2qhp_A Fructokinase; NP_810670 100.0 5.4E-41 1.9E-45 294.4 23.6 268 1-300 4-292 (296)
47 2hlz_A Ketohexokinase; non-pro 100.0 3.5E-40 1.2E-44 291.3 28.4 272 1-290 18-309 (312)
48 1bx4_A Protein (adenosine kina 100.0 1.5E-40 5E-45 297.9 21.5 287 1-290 7-337 (345)
49 2abs_A Adenosine kinase, AK; r 100.0 4.1E-39 1.4E-43 292.2 25.4 281 1-290 33-375 (383)
50 1vk4_A PFKB carbohydrate kinas 100.0 7.6E-37 2.6E-41 268.2 15.4 253 38-299 27-292 (298)
51 2yxt_A Pyridoxal kinase; beta 99.9 1.5E-22 5.2E-27 178.3 11.6 203 63-286 12-269 (312)
52 2ddm_A Pyridoxine kinase; pyri 99.9 6.6E-22 2.3E-26 171.9 13.7 155 132-289 86-269 (283)
53 1jxh_A Phosphomethylpyrimidine 99.8 1.2E-19 4.1E-24 157.9 17.5 151 135-287 95-269 (288)
54 1ub0_A THID, phosphomethylpyri 99.8 1.1E-19 3.7E-24 155.7 15.0 151 135-287 71-244 (258)
55 2i5b_A Phosphomethylpyrimidine 99.8 8.7E-19 3E-23 151.2 16.8 152 134-287 74-250 (271)
56 3pzs_A PM kinase, pyridoxamine 99.7 2E-17 6.7E-22 143.9 14.7 139 146-286 93-259 (289)
57 3mbh_A Putative phosphomethylp 99.7 1.4E-17 4.8E-22 144.7 12.9 152 133-286 79-258 (291)
58 3h74_A Pyridoxal kinase; PSI-I 99.7 1.3E-16 4.6E-21 137.9 13.8 139 145-286 86-248 (282)
59 3zs7_A Pyridoxal kinase; trans 99.6 1.5E-15 5E-20 132.5 13.6 138 146-286 92-261 (300)
60 1ekq_A Hydroxyethylthiazole ki 99.5 4.9E-13 1.7E-17 114.9 15.0 142 134-278 58-223 (272)
61 3rm5_A Hydroxymethylpyrimidine 99.5 2.5E-13 8.5E-18 127.8 11.2 133 146-279 106-268 (550)
62 1v8a_A Hydroxyethylthiazole ki 99.0 3.5E-09 1.2E-13 90.3 11.0 146 133-283 55-224 (265)
63 3rpz_A ADP/ATP-dependent NAD(P 98.7 6.5E-08 2.2E-12 82.7 10.8 165 132-306 96-274 (279)
64 3bgk_A SMU.573, putative uncha 98.7 4.6E-08 1.6E-12 85.1 9.5 158 134-306 125-305 (311)
65 2r3b_A YJEF-related protein; p 98.7 8E-08 2.7E-12 83.6 10.5 157 134-305 111-287 (310)
66 3rss_A Putative uncharacterize 98.6 2.3E-07 8E-12 85.7 12.0 166 132-306 318-496 (502)
67 3dzv_A 4-methyl-5-(beta-hydrox 98.6 8.7E-07 3E-11 75.3 14.5 144 133-280 57-230 (273)
68 3drw_A ADP-specific phosphofru 98.1 3.8E-05 1.3E-09 69.7 13.2 156 43-201 113-319 (474)
69 3hpd_A Hydroxyethylthiazole ki 98.1 2.3E-05 7.8E-10 66.1 10.1 131 146-280 73-221 (265)
70 1ua4_A Glucokinase, ADP-depend 98.0 5.9E-05 2E-09 68.5 11.6 152 45-201 109-302 (455)
71 3nl6_A Thiamine biosynthetic b 97.9 0.00017 5.7E-09 67.3 13.0 144 135-279 307-495 (540)
72 1gc5_A ADP-dependent glucokina 97.6 0.0012 4.1E-08 60.0 13.6 150 45-199 117-313 (467)
73 1l2l_A ADP-dependent glucokina 97.4 0.0032 1.1E-07 57.0 14.3 152 45-199 112-303 (457)
74 3k5w_A Carbohydrate kinase; 11 97.3 0.0017 5.8E-08 59.5 11.7 159 133-306 291-467 (475)
75 2yxh_A MAZG-related protein; T 47.0 67 0.0023 22.7 6.6 55 251-307 54-113 (116)
76 2gk4_A Conserved hypothetical 37.7 23 0.00077 28.8 3.1 26 44-69 26-51 (232)
77 3cra_A Protein MAZG; tandem-re 34.5 39 0.0013 28.0 4.0 57 251-307 196-259 (265)
78 1vmg_A Hypothetical protein SS 32.4 47 0.0016 22.7 3.6 26 251-276 67-92 (95)
79 2re2_A Uncharacterized protein 31.4 32 0.0011 25.1 2.8 38 47-88 65-102 (136)
80 2q5z_A MAZG, hypothetical prot 29.8 61 0.0021 22.8 4.0 28 251-278 79-106 (114)
81 2gta_A Hypothetical protein YP 29.8 55 0.0019 23.2 3.8 28 251-278 67-94 (119)
82 3kbq_A Protein TA0487; structu 28.5 68 0.0023 24.6 4.3 35 49-83 24-58 (172)
83 1jzt_A Hypothetical 27.5 kDa p 28.4 42 0.0014 27.4 3.3 41 46-87 70-115 (246)
84 2q73_A MAZG, hypothetical prot 27.5 74 0.0025 21.7 4.0 29 251-279 59-87 (100)
85 1ztd_A Hypothetical protein PF 26.9 66 0.0023 22.5 3.5 33 246-278 64-97 (133)
86 1y5e_A Molybdenum cofactor bio 26.2 1.1E+02 0.0038 23.1 5.2 35 49-83 32-66 (169)
87 1eo1_A Hypothetical protein MT 26.0 44 0.0015 23.8 2.7 39 47-88 51-89 (124)
88 2o8n_A APOA-I binding protein; 25.9 45 0.0015 27.6 3.0 41 46-87 91-135 (265)
89 4hb9_A Similarities with proba 25.6 46 0.0016 28.7 3.3 18 50-67 13-30 (412)
90 2dha_A FLJ20171 protein; RRM d 25.4 99 0.0034 21.9 4.5 41 45-85 6-48 (123)
91 1u7z_A Coenzyme A biosynthesis 23.3 53 0.0018 26.4 2.9 25 44-68 31-55 (226)
92 3iwt_A 178AA long hypothetical 23.3 2E+02 0.0067 21.7 6.2 33 50-82 42-74 (178)
93 2wfb_A Putative uncharacterize 22.7 43 0.0015 23.7 2.0 40 46-88 52-91 (120)
94 1mkz_A Molybdenum cofactor bio 22.4 1.1E+02 0.0038 23.2 4.5 35 49-83 29-63 (172)
95 2oie_A RS21-C6; helix, hydrola 21.4 83 0.0028 21.8 3.4 26 251-276 81-106 (111)
96 2yx6_A Hypothetical protein PH 21.2 57 0.0019 23.0 2.5 38 47-88 50-87 (121)
97 2pjk_A 178AA long hypothetical 21.1 1.6E+02 0.0056 22.4 5.3 35 49-83 41-75 (178)
98 3ctl_A D-allulose-6-phosphate 20.7 62 0.0021 26.1 2.9 54 133-189 79-133 (231)
No 1
>3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A*
Probab=100.00 E-value=7e-50 Score=355.43 Aligned_cols=308 Identities=50% Similarity=0.907 Sum_probs=263.6
Q ss_pred CcEeeecceeeeeEEecCCcccCCCCccccccceeeeecCCcccccCCchHHHHHHHHHhCCCceEEEEeec-C-hHHHH
Q psy8856 1 MNSLICGSLAFDNIMRFEGKFSNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLLNGNPLIVSILGK-D-GSSYL 78 (312)
Q Consensus 1 m~i~~~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~~~~~~~vG~-d-~~~i~ 78 (312)
|+|+++|++++|++..+++.+-+.+.++..+..+.+.........+||++.|+|.+|++||.++.++|.+|+ | +. ++
T Consensus 1 m~i~v~G~~~iD~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~~D~g~-i~ 79 (326)
T 3b1n_A 1 MATLICGSIAYDNIMTFEGRFREHILPDQVHLINLSFLVPTMRREFGGCAGNIAYALNLLGGDARMMGTLGAVDAQP-YL 79 (326)
T ss_dssp -CEEEESCCEEEEEEECSSCGGGGCCTTSSSSCEEEEECCSCCCEEECHHHHHHHHHHHTTCCEEEEEEEETTTCHH-HH
T ss_pred CcEEEECcceEEEEEecchhhhhhccccccCCCCcceecccceeccCCHHHHHHHHHHHcCCCeeEEEEECCcCHHH-HH
Confidence 899999999999999883232222233444455666666777889999999999999999999999999999 9 77 99
Q ss_pred HHHHHcCCccceeeecCCcccceEEEEEecCCCeeEEEeCCccccCCccccCCcCCceEEEECCCChHHHHHHHHHHHhc
Q psy8856 79 KHLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIFHPGAMQLSYDDNCINNADIKIAIISPDNCCNMIKHIKKILKL 158 (312)
Q Consensus 79 ~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (312)
+.|++.||+++++.+.++.+|+.+++.+++++++.+.+.+++...+..+++...+.++++++++..++.+.++++.+++.
T Consensus 80 ~~L~~~gVd~~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~ga~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~~~ 159 (326)
T 3b1n_A 80 DRMDALGLSREYVRVLPDTYSAQAMITTDLDNNQITAFHPGAMMQSHVNHAGEAKDIKLAIVGPDGFQGMVQHTEELAQA 159 (326)
T ss_dssp HHHHHHTCEEEEEEEETTCCCEEEEEEECTTCCCEEEEECGGGGGGGGSCGGGCCSCSEEEECSCCHHHHHHHHHHHHHH
T ss_pred HHHHHcCCcccceEEcCCCCceEEEEEECCCCceEEEEecChhhhcChhhcccccCCCEEEECCccHHHHHHHHHHHHHC
Confidence 99999999999988877778999999999888887766766655555555444468899999998888889999999989
Q ss_pred CCcEEEcCCCCcccCCHHHHHHHhhcccEEEeCHHHHHHhhcCCCCCHHHHhhcCCEEEEeeCCCceEEEecCCceEEcC
Q psy8856 159 KIPFIFDPGQSLSMFTKEELIKIIKKSSYIIVNEYESKLLVSKTSLSLQKINEQVKVLIVTRGELGSDIFLNNERKIKIP 238 (312)
Q Consensus 159 ~~~v~~D~~~~~~~~~~~~l~~ll~~~dvl~~n~~E~~~l~~~~~~~~~~l~~g~~~vvvt~G~~G~~~~~~~~~~~~~~ 238 (312)
+.++++||+.+...|..+.+.++++++|++++|++|++.+++....+.+++.++++.++||+|++|++++++ ++.+++|
T Consensus 160 g~~v~~D~~~~~~~~~~~~~~~~l~~~dil~~N~~Ea~~l~g~~~~~~~~l~~~~~~vvvT~G~~Ga~~~~~-~~~~~~~ 238 (326)
T 3b1n_A 160 GVPFIFDPGQGLPLFDGATLRRSIELATYIAVNDYEAKLVCDKTGWSEDEIASRVQALIITRGEHGATIRHR-DGTEQIP 238 (326)
T ss_dssp TCCEEECCGGGGGGCCHHHHHHHHHHCSEEEEEHHHHHHHHHHHCCCHHHHHTTSSEEEEECGGGCEEEEET-TEEEEEC
T ss_pred CCEEEEeCchhhhhccHHHHHHHHHhCCEEecCHHHHHHHhCCCCCCHHHHHhcCCEEEEecCCCceEEEEC-CcEEEeC
Confidence 999999999877677778888999999999999999999987654456777778999999999999999988 8888999
Q ss_pred CcccCCcCCCCCchhhhHHHHHHHHHcCCCHHHHHHHHHHHhchheeeccCCCCCCChHHHHHHHHHhhccc
Q psy8856 239 CVKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSSLMGSTEISHQGGQKHCPSLSEIDQRFKEAFGYR 310 (312)
Q Consensus 239 ~~~~~~~vdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~a~aa~~~~~~g~~~~~~~~~ev~~~~~~~~~~~ 310 (312)
++++++++||+||||+|.|||++++.+|+++++|+++|+++|+.++++.|+....|+.+|+++++++.+++.
T Consensus 239 ~~~v~~vvDttGAGDaF~ag~l~~l~~g~~~~~a~~~A~~~aa~~v~~~G~~~~~~~~~ev~~~l~~~~~~~ 310 (326)
T 3b1n_A 239 AVRAERVIDPTGCGDAFRGGLLYGIEHGFDWATAGRLASLMGALKIAHQGPQTYAPTRAEIDARFETAFGYR 310 (326)
T ss_dssp CCCCSCCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSTTCCCCCHHHHHHHHHHHHSSC
T ss_pred CCCCCCCCCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhcCCc
Confidence 998864689999999999999999999999999999999999999999999877899999999999876653
No 2
>2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A*
Probab=100.00 E-value=3.8e-49 Score=351.91 Aligned_cols=307 Identities=31% Similarity=0.492 Sum_probs=258.5
Q ss_pred CcEeeecceeeeeEEecCCcccCCCCccccccceeeeecCCcccccCCchHHHHHHHHHhCCCceEEEEeecC-hHHHHH
Q psy8856 1 MNSLICGSLAFDNIMRFEGKFSNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLLNGNPLIVSILGKD-GSSYLK 79 (312)
Q Consensus 1 m~i~~~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~~~~~~~vG~d-~~~i~~ 79 (312)
|+|+++|++++|.+..+++.+.+.+.++..+..+.+.........+||++.|+|.+|++||.++.++|.+|+| +. +++
T Consensus 11 m~i~v~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~g~-i~~ 89 (334)
T 2pkf_A 11 MTIAVTGSIATDHLMRFPGRFSEQLLPEHLHKVSLSFLVDDLVMHRGGVAGNMAFAIGVLGGEVALVGAAGADFAD-YRD 89 (334)
T ss_dssp SEEEEESCCEEEEEEECSSCTHHHHTTSCGGGCCCCCCCSEEEEEEECHHHHHHHHHHHTTCEEEEECEECGGGHH-HHH
T ss_pred CeEEEECChhheEEEecChHHhhhhchhhccccccccccccceecCCChHHHHHHHHHHcCCCeEEEEEEeCchHH-HHH
Confidence 8999999999999988732211111122233334344445567789999999999999999999999999999 77 999
Q ss_pred HHHHcCCccceeeecCCcccceEEEEEecCCCeeEEEeCCccccCCccccCC----cCCceEEEECCCChHHHHHHHHHH
Q psy8856 80 HLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIFHPGAMQLSYDDNCIN----NADIKIAIISPDNCCNMIKHIKKI 155 (312)
Q Consensus 80 ~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 155 (312)
.|++.||+++++.+.++.+|+.+++.+++++++.+.+++++...+..+++.. ++.++++++++..++.+.++++.+
T Consensus 90 ~L~~~gV~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~~~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~~~~a 169 (334)
T 2pkf_A 90 WLKARGVNCDHVLISETAHTARFTCTTDVDMAQIASFYPGAMSEARNIKLADVVSAIGKPELVIIGANDPEAMFLHTEEC 169 (334)
T ss_dssp HHHTTTEECTTCEECSSCCCEEEEEEECTTCCEEEEEECGGGGGGGGCCHHHHHHHHCSCSEEEEESCCHHHHHHHHHHH
T ss_pred HHHHCCCceeeeEecCCCCceEEEEEEcCCCCEEEEECCchhhhCCHhhcChhhhhhcCCCEEEEcCCChHHHHHHHHHH
Confidence 9999999999988777779999999998888887767766655454444432 268899999998888889999999
Q ss_pred HhcCCcEEEcCCCCcccCCHHHHHHHhhcccEEEeCHHHHHHhhcCCCCCHHHHhhcCCEEEEeeCCCceEEEecCCc-e
Q psy8856 156 LKLKIPFIFDPGQSLSMFTKEELIKIIKKSSYIIVNEYESKLLVSKTSLSLQKINEQVKVLIVTRGELGSDIFLNNER-K 234 (312)
Q Consensus 156 ~~~~~~v~~D~~~~~~~~~~~~l~~ll~~~dvl~~n~~E~~~l~~~~~~~~~~l~~g~~~vvvt~G~~G~~~~~~~~~-~ 234 (312)
++.+.++++||+.+...|..+.+.++++++|++++|++|++.+++....+.+++.++++.++||+|++|++++++ ++ .
T Consensus 170 ~~~g~~v~~D~~~~~~~~~~~~l~~~l~~~dil~~N~~E~~~l~g~~~~~~~~l~~~~~~vvvt~G~~G~~~~~~-~~~~ 248 (334)
T 2pkf_A 170 RKLGLAFAADPSQQLARLSGEEIRRLVNGAAYLFTNDYEWDLLLSKTGWSEADVMAQIDLRVTTLGPKGVDLVEP-DGTT 248 (334)
T ss_dssp HHHTCCEEEECGGGGGTSCHHHHHTTTTTCSEEEEEHHHHHHHHHHHCCCHHHHHTTCSCEEEECGGGCEEEECT-TSCE
T ss_pred HhcCCeEEEeccchhhhhhHHHHHHHHhcCCEEecCHHHHHHHhccCCCCHHHHHhcCCEEEEEeCCCCeEEEeC-CCcE
Confidence 989999999999877777778888999999999999999999988654456677778999999999999999987 66 8
Q ss_pred EEcCCcccCCcCCCCCchhhhHHHHHHHHHcCCCHHHHHHHHHHHhchheeeccCCCCCCChHHHHHHHHHhhcc
Q psy8856 235 IKIPCVKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSSLMGSTEISHQGGQKHCPSLSEIDQRFKEAFGY 309 (312)
Q Consensus 235 ~~~~~~~~~~~vdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~a~aa~~~~~~g~~~~~~~~~ev~~~~~~~~~~ 309 (312)
+++|++++++++||+||||+|.|||++++++|+++++|+++|+++|+.++++.|+....|+.+|+++++++.+++
T Consensus 249 ~~~~~~~v~~vvDttGAGDaF~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev~~~l~~~~~~ 323 (334)
T 2pkf_A 249 IHVGVVPETSQTDPTGVGDAFRAGFLTGRSAGLGLERSAQLGSLVAVLVLESTGTQEWQWDYEAAASRLAGAYGE 323 (334)
T ss_dssp EEECCCCCSCCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSSSCCCCCHHHHHHHHHHHHCH
T ss_pred EEeCCcCCCCCCCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhCCCCCcCCCCHHHHHHHHHHHHhH
Confidence 899999886478999999999999999999999999999999999999999999988789999999999887654
No 3
>2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A
Probab=100.00 E-value=6.8e-48 Score=339.30 Aligned_cols=292 Identities=32% Similarity=0.490 Sum_probs=251.6
Q ss_pred cEeeecceeeeeEEecCCcccCCCCccccccceeeeecCCcccccCCchHHHHHHHHHhCCCceEEEEeecC--hHHHHH
Q psy8856 2 NSLICGSLAFDNIMRFEGKFSNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLLNGNPLIVSILGKD--GSSYLK 79 (312)
Q Consensus 2 ~i~~~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~~~~~~~vG~d--~~~i~~ 79 (312)
+|+++|++++|++..++ ++|. +++ +.+.......+||++.|+|.+|++||.++.++|.+|+| |+.+++
T Consensus 7 ~i~viG~~~iD~~~~~~-~~p~---~~~------~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~i~~vG~D~~g~~i~~ 76 (302)
T 2c4e_A 7 KITCVGHTALDYIFNVE-KFPE---PNT------SIQIPSARKYYGGAAANTAVGIKKLGVNSELLSCVGYDFKNSGYER 76 (302)
T ss_dssp EEEEESCCEEEEEEECS-SCCC---TTC------CCCCSCEEEEEECHHHHHHHHHHHTTCEEEEECEECTTTTTSHHHH
T ss_pred cEEEECceeEEEEeccc-ccCC---CCc------eeeecceeecCCCHHHHHHHHHHHCCCceEEEEEEeCCCchHHHHH
Confidence 69999999999999988 7754 222 22344567889999999999999999999999999998 789999
Q ss_pred HHHHcCCccceeeecCCcccceEEEEEecCCCeeEEEeCCccccCCccccCCcCCceEEEECCCChHHHHHHHHHHHhcC
Q psy8856 80 HLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIFHPGAMQLSYDDNCINNADIKIAIISPDNCCNMIKHIKKILKLK 159 (312)
Q Consensus 80 ~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (312)
.|++.||+++++...++.+|+.+++.+++++++.+..+.++...++++++.. .++++++++...++.+.++++.+++.+
T Consensus 77 ~l~~~gv~~~~~~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~a~~~g 155 (302)
T 2c4e_A 77 YLKNLDINISKLYYSEEEETPKAWIFTDKDNNQITFFLWGAAKHYKELNPPN-FNTEIVHIATGDPEFNLKCAKKAYGNN 155 (302)
T ss_dssp HHHHTTCBCTTCEECSSSCCCEEEEEECSSCCEECCEECGGGGGGGGCCCCC-CCEEEEEECSSCHHHHHHHHHHHBTTB
T ss_pred HHHHcCCcccceEeeCCCCCceEEEEECCCCCEEEEEeCChhhhCCHhhcCc-ccCCEEEEeCCCcHHHHHHHHHHHhcC
Confidence 9999999999887777778999999998888887777776665566666655 688999999888888889999998889
Q ss_pred CcEEEcCCCCcccCCHHHHHHHhhcccEEEeCHHHHHHhhcCCCCCHHHHhhcCCEEEEeeCCCceEEEecCCceEEcCC
Q psy8856 160 IPFIFDPGQSLSMFTKEELIKIIKKSSYIIVNEYESKLLVSKTSLSLQKINEQVKVLIVTRGELGSDIFLNNERKIKIPC 239 (312)
Q Consensus 160 ~~v~~D~~~~~~~~~~~~l~~ll~~~dvl~~n~~E~~~l~~~~~~~~~~l~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~ 239 (312)
++++||+.+...|..+.+.++++++|++++|++|++.+++....+...+.+.++.++||.|++|++++++ ++.+++|+
T Consensus 156 -~v~~D~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~l~~~~~~vvvt~G~~G~~~~~~-~~~~~~~~ 233 (302)
T 2c4e_A 156 -LVSFDPGQDLPQYSKEMLLEIIEHTNFLFMNKHEFERASNLLNFEIDDYLERVDALIVTKGSKGSVIYTK-DKKIEIPC 233 (302)
T ss_dssp -EEEECCGGGGGGCCHHHHHHHHHTCSEEEEEHHHHHHHHHHHTCCHHHHHTTCSEEEEECGGGCEEEECS-SCEEEECC
T ss_pred -CEEEeCchhhhhhhHHHHHHHHhcCCEEEcCHHHHHHHhCCCCccHHHHHhcCCEEEEEECCCceEEEeC-CcEEEeCC
Confidence 9999999765566677888999999999999999999987644444455444889999999999999988 88889999
Q ss_pred cccCCcCCCCCchhhhHHHHHHHHHcCCCHHHHHHHHHHHhchheeeccCCCCCCChHHHHHHHHHh
Q psy8856 240 VKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSSLMGSTEISHQGGQKHCPSLSEIDQRFKEA 306 (312)
Q Consensus 240 ~~~~~~vdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~a~aa~~~~~~g~~~~~~~~~ev~~~~~~~ 306 (312)
+++++++||+||||+|.|||++++++|+++++|+++|+++|+.++++.|+....|+++|+++++++.
T Consensus 234 ~~v~~~vdt~GAGDaf~a~~~~~l~~g~~~~~a~~~a~~~aa~~~~~~G~~~~~p~~~ev~~~~~~~ 300 (302)
T 2c4e_A 234 IKAGKVIDPTGAGDSYRAGFLSAYVKGYDLEKCGLIGAATASFVVEAKGCQTNLPTWDKVVERLEKH 300 (302)
T ss_dssp CCCSCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTSSSSSTTCCCHHHHHHHHHHC
T ss_pred ccCCcCCcCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHccccccccCCCHHHHHHHHHhc
Confidence 9885489999999999999999999999999999999999999999999987689999999998753
No 4
>3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} SCOP: c.72.1.0 PDB: 3lki_A*
Probab=100.00 E-value=7.5e-47 Score=337.75 Aligned_cols=292 Identities=18% Similarity=0.221 Sum_probs=235.9
Q ss_pred CcEeeecceeeeeEEecCCcccCCCCccccccceeeeecCCcccccCCchHHHHHHHHHhCCCceEEEEeecC--hHHHH
Q psy8856 1 MNSLICGSLAFDNIMRFEGKFSNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLLNGNPLIVSILGKD--GSSYL 78 (312)
Q Consensus 1 m~i~~~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~~~~~~~vG~d--~~~i~ 78 (312)
|+|+++|++++|++...+ ++|. . .......+||++.|+|.+|++||.++.++|.+|+| |+.++
T Consensus 5 ~~v~viG~~~iD~~~~~~-~~~~-----~---------~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~g~~l~ 69 (338)
T 3ljs_A 5 KTILCFGEALIDMLAQPL-VKKG-----M---------PRAFLQCAGGAPANVAVAVARLGGAVQFVGMLGSDMFGDFLF 69 (338)
T ss_dssp CEEEEESCCEEEEEECCC-SSTT-----S---------CCCEEEEEECHHHHHHHHHHHHTCCEEEESEEESSHHHHHHH
T ss_pred CCEEEEChhhhheeccCC-CCcc-----c---------hhceeecCCChHHHHHHHHHhCCCCEEEEeeccCCHHHHHHH
Confidence 589999999999998887 5542 1 23457889999999999999999999999999999 78899
Q ss_pred HHHHHcCCccceeeecCCcccceEEEEEecCCCeeEEEeC--CccccCCccccCC--cCCceEEEECCC------ChHHH
Q psy8856 79 KHLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIFHP--GAMQLSYDDNCIN--NADIKIAIISPD------NCCNM 148 (312)
Q Consensus 79 ~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~------~~~~~ 148 (312)
+.|+++||+++++.+.++.+|+.+++.+++++++.+.++. ++...++++++.. ++.++++++++. ..+.+
T Consensus 70 ~~l~~~gV~~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 149 (338)
T 3ljs_A 70 DSFAEAGVVTDGIVRTSTAKTALAFVALDAHGERSFSFYRPPAADLLFRVEHFQDASFSDALIFHACSNSMTDADIAEVT 149 (338)
T ss_dssp HHHHHHTCBCTTCEEESSSCCCEEEEECCSTTCCEEEEECSSCGGGGCCGGGCCHHHHHTEEEEEEEGGGGSSHHHHHHH
T ss_pred HHHHHcCCCceeEEEcCCCCceEEEEEECCCCCeEEEEeCCCChhHhCCHhhcCHhHhcCCCEEEECChHhcCchHHHHH
Confidence 9999999999999887788999999999988887765553 4444566666664 567899988642 23677
Q ss_pred HHHHHHHHhcCCcEEEcCCCCcccCC-----HHHHHHHhhcccEEEeCHHHHHHhhcCCCCCH----HHHhh-cCCEEEE
Q psy8856 149 IKHIKKILKLKIPFIFDPGQSLSMFT-----KEELIKIIKKSSYIIVNEYESKLLVSKTSLSL----QKINE-QVKVLIV 218 (312)
Q Consensus 149 ~~~~~~~~~~~~~v~~D~~~~~~~~~-----~~~l~~ll~~~dvl~~n~~E~~~l~~~~~~~~----~~l~~-g~~~vvv 218 (312)
.++++.+++.+.++++||+.+...|. .+.+.++++++|++++|++|++.|++...... +.+.+ +++.++|
T Consensus 150 ~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~l~~~g~~~vvv 229 (338)
T 3ljs_A 150 FEGMRRAQAAGAIVSFDLNFRPMLWPNGENPASRLWKGLSLADVVKLSSEELDYLANTLAADANAVIQQLWQGRAQLLLV 229 (338)
T ss_dssp HHHHHHHHHTTCEEEEECCCCGGGSCTTCCTHHHHHHHHHTCSEEEEEHHHHHHHHHHHTSCHHHHHHHHTTTTCCEEEE
T ss_pred HHHHHHHHHcCCEEEEECCCChhhcCCHHHHHHHHHHHHhhCCEEEecHHHHHHHhCCCChhHHHHHHHHHhcCCCEEEE
Confidence 88899999999999999998776663 56688899999999999999999998654433 33433 8999999
Q ss_pred eeCCCceEEEecCCceEEcCCcccCCcCCCCCchhhhHHHHHHHHHcC--------------CCHHHHHHHHHHHhchhe
Q psy8856 219 TRGELGSDIFLNNERKIKIPCVKADRIVDPTGCGDAFRSGVLFGIINN--------------LDWYTTGRLSSLMGSTEI 284 (312)
Q Consensus 219 t~G~~G~~~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~ag~~~~l~~g--------------~~~~~a~~~a~a~aa~~~ 284 (312)
|.|++|++++++ ++.+++|+++++ ++||+||||+|.|||++++++| +++++|+++|+++|+++|
T Consensus 230 T~G~~G~~~~~~-~~~~~~~~~~v~-vvDttGAGDaF~a~~~~~l~~g~~~~~~~~~~~~~~~~l~~al~~A~~~aa~~v 307 (338)
T 3ljs_A 230 TDAAGPVHWYTR-TAGGEVPTFRVQ-VQDSNAAGDAFVGGMLYTFAQQFDDAAALIDFCHDPESIVSTLRFAAAVGALAV 307 (338)
T ss_dssp EETTEEEEEEES-SCEEEECC------------CHHHHHHHHHHHHHHCSSTHHHHHHHTCHHHHHHHHHHHHHHHGGGC
T ss_pred eeCCCceEEEEC-CceEEeCCCCCc-cCCCCCccHHHHHHHHHHHHhCCCcccchhccccChHHHHHHHHHHHHHHHHHh
Confidence 999999999998 899999999986 9999999999999999999999 899999999999999999
Q ss_pred eeccCCCCCCChHHHHHHHHHhhcc
Q psy8856 285 SHQGGQKHCPSLSEIDQRFKEAFGY 309 (312)
Q Consensus 285 ~~~g~~~~~~~~~ev~~~~~~~~~~ 309 (312)
++.|+..+.|+++|++++++++...
T Consensus 308 ~~~Ga~~~~p~~~ev~~~~~~~~~~ 332 (338)
T 3ljs_A 308 TRQGAFTAMPMLSEVLSLIQEQSEG 332 (338)
T ss_dssp ----CCCCTTHHHHHHHHHHHHHC-
T ss_pred CCCCCCCCCCCHHHHHHHHhhhccc
Confidence 9999988789999999999987654
No 5
>3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A*
Probab=100.00 E-value=2.9e-47 Score=334.73 Aligned_cols=283 Identities=16% Similarity=0.184 Sum_probs=241.6
Q ss_pred CcEeeecceeeeeEEecCCcccCCCCccccccceeeeecCCcccccCCchHHHHHHHHHhCCCceEEEEeecC--hHHHH
Q psy8856 1 MNSLICGSLAFDNIMRFEGKFSNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLLNGNPLIVSILGKD--GSSYL 78 (312)
Q Consensus 1 m~i~~~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~~~~~~~vG~d--~~~i~ 78 (312)
|+|+++|++++|++..++ ++|. ++ .+.+.......+||++.|+|.+|++||.++.++|.+|+| |+.++
T Consensus 3 ~~i~viG~~~iD~~~~~~-~~p~---~g------~~~~~~~~~~~~GG~~~NvA~~la~lG~~~~~i~~vG~D~~g~~i~ 72 (299)
T 3ikh_A 3 LRVYVTGNITVDETWSIP-DIPK---KG------ASIHGVKVSQDIGGKGANQAIILSRCGIETRLIAATGNDSNGAWIR 72 (299)
T ss_dssp CCEEEECCCEEEEEEECS-SCCC---TT------CEEECEEEEEEEECHHHHHHHHHHHTTCCEEEECCCCSSHHHHHHH
T ss_pred ceEEEECceEEEEEEecC-CCCC---CC------CeEEeeeeeeccCCHHHHHHHHHHHCCCCeEEEEEECCCHHHHHHH
Confidence 789999999999999998 7764 32 233445567889999999999999999999999999999 78899
Q ss_pred HHHHHcCCccceeeecCCcccceEEEEEecCCCeeEEEeCCccccCCccccC----CcCCceEEEECCCC-hHHHHHHHH
Q psy8856 79 KHLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIFHPGAMQLSYDDNCI----NNADIKIAIISPDN-CCNMIKHIK 153 (312)
Q Consensus 79 ~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~ 153 (312)
+.|+++||+++++. .++.+|+.+++.+++++++.+..++++...++++++. .+..+++++++... .+.+.++++
T Consensus 73 ~~l~~~gv~~~~v~-~~~~~T~~~~~~~~~~g~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~ 151 (299)
T 3ikh_A 73 QQIKNEPLMLLPDG-HFNQHSDTSIILNSADGDNAIITTTAAADTFSLDEMIPHMADAVAGDILLQQGNFSLDKTRALFQ 151 (299)
T ss_dssp HHGGGSSCEEESSS-CCSSCCEEEEEECSSSCSCEEEEECHHHHHCCHHHHGGGGTTCCTTCEEEECSCSCHHHHHHHHH
T ss_pred HHHHHcCCceeeeE-ecCCCCcEEEEEEcCCCCeEEEEeCCccccCCHHHHHHHHhhhccCCEEEECCCCCHHHHHHHHH
Confidence 99999999999885 4567899999999988888777777665556555443 35788999998764 477888899
Q ss_pred HHHhcCCcEEEcCCCCcccCCHHHHHHHhhcccEEEeCHHHHHHhhcCCCCCHHHHhhcCCEEEEeeCCCceEEEecCCc
Q psy8856 154 KILKLKIPFIFDPGQSLSMFTKEELIKIIKKSSYIIVNEYESKLLVSKTSLSLQKINEQVKVLIVTRGELGSDIFLNNER 233 (312)
Q Consensus 154 ~~~~~~~~v~~D~~~~~~~~~~~~l~~ll~~~dvl~~n~~E~~~l~~~~~~~~~~l~~g~~~vvvt~G~~G~~~~~~~~~ 233 (312)
.+++.+.++++||++.. +.+.++++++|++++|++|++.+++ .+++.++||+|++|++++++ ++
T Consensus 152 ~a~~~g~~v~~D~~~~~-----~~~~~ll~~~dil~~N~~E~~~l~g----------~g~~~vvvt~G~~G~~~~~~-~~ 215 (299)
T 3ikh_A 152 YARSRGMTTVFNPSPVN-----PDFCHLWPLIDIAVVNESEAELLQP----------YGVKTLVITQGAAGAWLVQE-GQ 215 (299)
T ss_dssp HHHHTTCEEEECCCSCC-----GGGGGCGGGCSEEEEEHHHHHHHCC----------CSCSEEEEECGGGCEEEECS-SC
T ss_pred HHHHcCCEEEEccccch-----hhHHHHHhhCCEEEecHHHHHHHhc----------CCCCEEEEEECCCceEEEeC-Cc
Confidence 99999999999998753 2346789999999999999999976 68899999999999999988 88
Q ss_pred eEEcCCcccCCcCCCCCchhhhHH-HHHHHHHcCCCHHH-HHHHHHHHhchheeeccCCCCCCChHHHHHHHHHhhcccC
Q psy8856 234 KIKIPCVKADRIVDPTGCGDAFRS-GVLFGIINNLDWYT-TGRLSSLMGSTEISHQGGQKHCPSLSEIDQRFKEAFGYRY 311 (312)
Q Consensus 234 ~~~~~~~~~~~~vdt~GaGDaf~a-g~~~~l~~g~~~~~-a~~~a~a~aa~~~~~~g~~~~~~~~~ev~~~~~~~~~~~~ 311 (312)
.+++|+++++ ++||+||||+|.| ||++++.+|+++++ |+++|+++|+++|++.|+..+.|+++|+++++++...++|
T Consensus 216 ~~~~~~~~v~-vvDttGAGDaf~a~~~~~~l~~g~~~~~~a~~~a~~~aa~~v~~~G~~~~~p~~~ev~~~l~~~~~~~~ 294 (299)
T 3ikh_A 216 RQFCPAVPAE-ALDTTGAGDTFLAVMLASALLRGVAPDALALAHASRAAAITVSRRGTLSAFPGSRELAALLTTDGAEGH 294 (299)
T ss_dssp EEEECCCCCC-CSCCTTHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHSSSSTTTSCCHHHHHHHHC-------
T ss_pred eEEeCCCCCc-cCCCCCchHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhCCCcccccCCCHHHHHHHHHhcccccc
Confidence 9999999986 9999999999999 99999999999999 9999999999999999998878999999999988776655
No 6
>3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus}
Probab=100.00 E-value=2e-46 Score=330.30 Aligned_cols=284 Identities=19% Similarity=0.264 Sum_probs=244.6
Q ss_pred CcEeeecceeeeeEEecCCcccCCCCccccccceeee-ecCCcccccCCchHHHHHHHHHhCCCceEEEEeecC--hHHH
Q psy8856 1 MNSLICGSLAFDNIMRFEGKFSNSLLPDQLDKINVSF-YSPTMKKEYGGCAGNIAYNLKLLNGNPLIVSILGKD--GSSY 77 (312)
Q Consensus 1 m~i~~~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~GG~~~n~a~~l~~lG~~~~~~~~vG~d--~~~i 77 (312)
|||+++|++++|++..++ ++|. ++ .+. +.......+||++.|+|.+|++||.++.++|.+|+| |+.+
T Consensus 3 ~~v~viG~~~~D~~~~~~-~~p~---~g------~~~~~~~~~~~~~GG~~~NvA~~la~lG~~~~~~~~vG~D~~g~~i 72 (304)
T 3ry7_A 3 NKVVILGSTNVDQFLTVE-RYAQ---PG------ETLHVEEAQKAFGGGKGANQAIATARMQADTTFITKIGTDGVADFI 72 (304)
T ss_dssp CEEEEECCCEEEEEEECS-SCCC---TT------CCCCCSSCCEEEEECHHHHHHHHHHHTTCEEEEECEEESSCTTHHH
T ss_pred CcEEEEccceeEEEEecc-CCCC---CC------CceecccceeecCCCHHHHHHHHHHHCCCCeEEEEEeCCChHHHHH
Confidence 479999999999999988 7764 22 233 445668889999999999999999999999999999 7899
Q ss_pred HHHHHHcCCccceeeecCCcccceEEEEEecCCCeeEEEeCCccccCCccccCC----cCCceEEEECCCC-hHHHHHHH
Q psy8856 78 LKHLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIFHPGAMQLSYDDNCIN----NADIKIAIISPDN-CCNMIKHI 152 (312)
Q Consensus 78 ~~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~ 152 (312)
++.|+++||+++++.+.++.+|+.+++.+++++++.+..++++...++++++.. ++.+++++++... .+.+.+++
T Consensus 73 ~~~l~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 152 (304)
T 3ry7_A 73 LEDFKVAHIDTSYIIKTAEAKTGQAFITVNAEGQNTIYVYGGANMTMTPEDVINAKDAIINADFVVAQLEVPIPAIISAF 152 (304)
T ss_dssp HHHHHHTTCBCTTCEEESSSCCEEEEEEECSSCCEEEEEECGGGGGCCHHHHHTTHHHHHTCSEEEEETTSCHHHHHHHH
T ss_pred HHHHHHcCCcchhEEEcCCCCCcEEEEEECCCCCEEEEEecCchhcCCHHHHHHHHHHhccCCEEEEcCCCCHHHHHHHH
Confidence 999999999999998878889999999999888888777777766676665543 4678999988654 47888899
Q ss_pred HHHHhcCCcEEEcCCCCcccCCHHHHHHHhhcccEEEeCHHHHHHhhcCCCCCHH-------HHh-hcCCEEEEeeCCCc
Q psy8856 153 KKILKLKIPFIFDPGQSLSMFTKEELIKIIKKSSYIIVNEYESKLLVSKTSLSLQ-------KIN-EQVKVLIVTRGELG 224 (312)
Q Consensus 153 ~~~~~~~~~v~~D~~~~~~~~~~~~l~~ll~~~dvl~~n~~E~~~l~~~~~~~~~-------~l~-~g~~~vvvt~G~~G 224 (312)
+.+++.+.++++||+.... .+.++++++|++++|++|++.+++....+.+ .+. .+++.++||+|++|
T Consensus 153 ~~a~~~~~~v~~D~~~~~~-----~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G 227 (304)
T 3ry7_A 153 EIAKAHGVTTVLNPAPAKA-----LPNELLSLIDIIVPNETEAELLSGIKVTNEQSMKDNANYFLSIGIKTVLITLGKQG 227 (304)
T ss_dssp HHHHHTTCEEEEECCSCCC-----CCHHHHTTCSEECCBHHHHHHHHSCCCCSHHHHHHHHHHHHHTTCCEEEEECGGGC
T ss_pred HHHHHcCCEEEEeCCcccc-----ccHHHHHhCCEEecCHHHHHHHhCCCCCChhHHHHHHHHHHHcCCCEEEEEeCCCc
Confidence 9999999999999987532 2367899999999999999999987644322 232 28999999999999
Q ss_pred eEEEecCCceEEcCCcccCCcCCCCCchhhhHHHHHHHHHcC-CCHHHHHHHHHHHhchheeeccCCCCCCChHHHHH
Q psy8856 225 SDIFLNNERKIKIPCVKADRIVDPTGCGDAFRSGVLFGIINN-LDWYTTGRLSSLMGSTEISHQGGQKHCPSLSEIDQ 301 (312)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~ag~~~~l~~g-~~~~~a~~~a~a~aa~~~~~~g~~~~~~~~~ev~~ 301 (312)
++++++ ++.+++|+++++ ++||+||||+|.|||++++.+| +++++|+++|+++|+++|++.|+..+.|+++|+++
T Consensus 228 ~~~~~~-~~~~~~~~~~v~-~vdttGAGDaf~a~~~~~l~~g~~~~~~a~~~A~~~aa~~~~~~G~~~~~p~~~ev~~ 303 (304)
T 3ry7_A 228 TYFATK-NQSQHIEAYKVN-AIDTTAAGDTFIGAFVSRLNKSQDNLADAIDFGNKASSLTVQKHGAQASIPLLEEVNQ 303 (304)
T ss_dssp EEEECS-SCEEEECCSSCC-SSCCSSHHHHHHHHHHHHCCTTCTTHHHHHHHHHHHHHTTSCCCCTGGGCCCHHHHHT
T ss_pred eEEEEC-CeeEEecCCCcc-cCCCCCchHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhCCCCccccCCCHHHHhh
Confidence 999998 899999999986 9999999999999999999999 99999999999999999999999877899999975
No 7
>3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A*
Probab=100.00 E-value=3.9e-46 Score=328.99 Aligned_cols=279 Identities=15% Similarity=0.195 Sum_probs=243.6
Q ss_pred CcEeeecceeeeeEEecCCcccCCCCccccccceeeeecCCcccccCCchHHHHHHHHHhCCCceEEEEeecC--hHHHH
Q psy8856 1 MNSLICGSLAFDNIMRFEGKFSNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLLNGNPLIVSILGKD--GSSYL 78 (312)
Q Consensus 1 m~i~~~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~~~~~~~vG~d--~~~i~ 78 (312)
|||+++|++++|++..++ ++|. +++ +.+.......+||++.|+|.+|++||.++.++|.+|+| |+.++
T Consensus 20 ~~i~viG~~~iD~~~~v~-~~p~---~g~------~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~g~~i~ 89 (310)
T 3go6_A 20 PRVCVVGSVNMDLTFVVD-ALPR---PGE------TVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFGDDPAAAQLR 89 (310)
T ss_dssp CEEEEECCCEEEEEEECS-SCCC---TTC------CCCCSEEEEEEECHHHHHHHHHHHTTCEEEEECEECSSHHHHHHH
T ss_pred CCEEEECCceEEEEEecC-CCCC---CCC------eEEecceeecCCCHHHHHHHHHHHCCCCeEEEEEECCCHHHHHHH
Confidence 579999999999999988 7764 222 33445567889999999999999999999999999999 78899
Q ss_pred HHHHHcCCccceeeecCCcccceEEEEEecCCCeeEEEeCCccccCCccccCCcCCceEEEECCCC-hHHHHHHHHHHHh
Q psy8856 79 KHLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIFHPGAMQLSYDDNCINNADIKIAIISPDN-CCNMIKHIKKILK 157 (312)
Q Consensus 79 ~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 157 (312)
+.|++.||+++++... ..+|+.+++.+++++++.+..++++...++ +....++.+++++++... .+.+.++++.+++
T Consensus 90 ~~L~~~gV~~~~v~~~-~~~T~~~~~~~~~~g~~~~~~~~ga~~~l~-~~~~~l~~~~~v~~~~~~~~~~~~~~~~~a~~ 167 (310)
T 3go6_A 90 AHLRANAVGLDRTVTV-PGPSGTAIIVVDASAENTVLVAPGANAHLT-PVPSAVANCDVLLTQLEIPVATALAAARAAQS 167 (310)
T ss_dssp HHHHHTTCBCTTCEEC-SSCCEEEEEEECTTSCEEEEEECGGGGGCC-CCTTTTTTCSEEEECSSSCHHHHHHHHHHHHH
T ss_pred HHHHHcCCccceeEec-CCCCCEEEEEEcCCCCEEEEecCChhhhHH-HHHHHhhcCCEEEECCCCCHHHHHHHHHHHHH
Confidence 9999999999988654 459999999999889888887777665555 333346789999998654 5788899999999
Q ss_pred cCCcEEEcCCCCcccCCHHHHHHHhhcccEEEeCHHHHHHhhcCCCCCHHHHhhcCCEEEEeeCCCceEEEecCCceEEc
Q psy8856 158 LKIPFIFDPGQSLSMFTKEELIKIIKKSSYIIVNEYESKLLVSKTSLSLQKINEQVKVLIVTRGELGSDIFLNNERKIKI 237 (312)
Q Consensus 158 ~~~~v~~D~~~~~~~~~~~~l~~ll~~~dvl~~n~~E~~~l~~~~~~~~~~l~~g~~~vvvt~G~~G~~~~~~~~~~~~~ 237 (312)
.+.++++|+++... ..+.+.++++++|++++|++|++.|++. ++.++||+|++|++++++ ++.+++
T Consensus 168 ~g~~v~~D~~~~~~--~~~~~~~ll~~~dil~~N~~Ea~~l~g~-----------~~~vvvt~G~~Ga~~~~~-~~~~~~ 233 (310)
T 3go6_A 168 ADAVVMVNASPAGQ--DRSSLQDLAAIADVVIANEHEANDWPSP-----------PTHFVITLGVRGARYVGA-DGVFEV 233 (310)
T ss_dssp TTCEEEEECCSSSC--CHHHHHHHHHHCSEEEEEHHHHHHSSSC-----------CSEEEEECGGGCEEEEET-TEEEEE
T ss_pred cCCEEEEcCCcccc--chHHHHHHHhhCCEEEeCHHHHHHHhCC-----------CCEEEEEECCCCEEEEEC-CceEEe
Confidence 99999999986543 4677889999999999999999999764 789999999999999998 899999
Q ss_pred CCcccCCcCCCCCchhhhHHHHHHHHHc----CCCHHHHHHHHHHHhchheeeccCCCCCCChHHHHHHHHHh
Q psy8856 238 PCVKADRIVDPTGCGDAFRSGVLFGIIN----NLDWYTTGRLSSLMGSTEISHQGGQKHCPSLSEIDQRFKEA 306 (312)
Q Consensus 238 ~~~~~~~~vdt~GaGDaf~ag~~~~l~~----g~~~~~a~~~a~a~aa~~~~~~g~~~~~~~~~ev~~~~~~~ 306 (312)
|+++++ ++||+||||+|.|||++++.+ |+++++|+++|+++|+++|++.|+..+.|+++|+++++++.
T Consensus 234 ~~~~v~-vvdttGAGDaF~ag~~~~l~~~~~~g~~l~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev~~~l~~~ 305 (310)
T 3go6_A 234 PAPTVT-PVDTAGAGDVFAGVLAANWPRNPGSPAERLRALRRACAAGALATLVSGVGDCAPAAAAIDAALRAN 305 (310)
T ss_dssp CCCCCC-CSCCTTHHHHHHHHHHHHCCSSSCCHHHHHHHHHHHHHHHHHHTTSSCSTTCCCCHHHHHHHHHTC
T ss_pred CCCCCC-cCcCCCchHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHhc
Confidence 999986 999999999999999999999 99999999999999999999999987789999999998864
No 8
>2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=8.3e-46 Score=331.26 Aligned_cols=290 Identities=16% Similarity=0.219 Sum_probs=246.3
Q ss_pred CcEeeecceeeeeEEecCCcccCCCCccccccceeeeecCCcccccCCchHHHHHHHHHhCCCceEEEEeecC--hHHHH
Q psy8856 1 MNSLICGSLAFDNIMRFEGKFSNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLLNGNPLIVSILGKD--GSSYL 78 (312)
Q Consensus 1 m~i~~~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~~~~~~~vG~d--~~~i~ 78 (312)
|+|+++|++++|.+..++ ++|. +++ +.+.......+||++.|+|.+|++||.++.++|.+|+| |+.++
T Consensus 30 ~~i~viG~~~iD~~~~~~-~~p~---~~~------~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~i~ 99 (343)
T 2rbc_A 30 KHVLCVGAAVLDTLFRVA-DMPK---GEG------KVLPYEVLQIAEGMASSAAYAVHRMGGRASLWGAVGDDETGTRIL 99 (343)
T ss_dssp CEEEEESCCEEEEEEECS-SCCC---SSS------CCCCSEEEEEEECHHHHHHHHHHHTTCEEEEECEEESSHHHHHHH
T ss_pred CeEEEECcceEEEEeecC-CCCC---CCC------eEeeeeeEEcCCcHHHHHHHHHHHcCCceEEEEEeCCCHHHHHHH
Confidence 679999999999999988 7754 221 23344557789999999999999999999999999999 78899
Q ss_pred HHHHHcCCccceeeecCCcccceEEEEEecCCCeeEEEeCCccccCCccccC--CcCCceEEEECCCChHHHHHHHHHHH
Q psy8856 79 KHLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIFHPGAMQLSYDDNCI--NNADIKIAIISPDNCCNMIKHIKKIL 156 (312)
Q Consensus 79 ~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (312)
+.|++.||+++++.+.++.+|+.+++.+++++++.+...+++...++++++. .+..++++++++..++.+.++++.++
T Consensus 100 ~~L~~~GVd~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~~~~~~~~l~~~~l~~~~~v~~~~~~~~~~~~~~~~a~ 179 (343)
T 2rbc_A 100 RDLSESGIDTSGMTVAPGARSALSTIIIDNRGERLIVPFYDHRLHEKKRACTPEDIALFDAVLVDVRWPELALDVLTVAR 179 (343)
T ss_dssp HHHHHTTEECTTCEEETTCCCEEEEEEECTTSCEEEEEECCGGGGSSCCCCCHHHHTTCSEEEECSSSHHHHHHHHHHHH
T ss_pred HHHHHcCCceeeEEEcCCCCCceEEEEECCCCCEEEEEcCCCcccCChhHhcHhhhCCCCEEEEcCCCHHHHHHHHHHHH
Confidence 9999999999998887777899999999988888776666655445555543 25789999999888888889999999
Q ss_pred hcCCcEEEcCCCCcccCCHHHHHH-HhhcccEEEeCHHHHHHhhcCCCCC--HHHHhh-cC-CEEEEeeCCCceEEEecC
Q psy8856 157 KLKIPFIFDPGQSLSMFTKEELIK-IIKKSSYIIVNEYESKLLVSKTSLS--LQKINE-QV-KVLIVTRGELGSDIFLNN 231 (312)
Q Consensus 157 ~~~~~v~~D~~~~~~~~~~~~l~~-ll~~~dvl~~n~~E~~~l~~~~~~~--~~~l~~-g~-~~vvvt~G~~G~~~~~~~ 231 (312)
+.+.++++||... .+.+.+ +++++|++++|++|++.+++..+.. .+.+.+ ++ +.++||+|++|++++++
T Consensus 180 ~~g~~v~~Dp~~~-----~~~~~~~ll~~~dil~~N~~Ea~~l~g~~~~~~~~~~l~~~g~~~~VvvT~G~~G~~~~~~- 253 (343)
T 2rbc_A 180 ALGKPAILDGDVA-----PVETLEGLAPAATHIVFSEPAATRLTGLETVKDMLPVLHARYPQTFIAVTAGPAGCWWTEA- 253 (343)
T ss_dssp HTTCCEEEEECSC-----CHHHHHHHGGGCSEEEEEHHHHHHHHCCSSHHHHHHHHHHHSTTSEEEEECGGGCEEEECT-
T ss_pred HCCCEEEEECCcc-----ccccHHHHHhcCCEEEeCHHHHHHHcCCCCHHHHHHHHHHhCCCceEEEEECCcceEEEeC-
Confidence 9999999999742 245677 9999999999999999999865321 123333 78 99999999999999887
Q ss_pred C--ceEEcCCcccCCcCCCCCchhhhHHHHHHHHHcCCCHHHHHHHHHHHhchheeeccCCCCCCChHHHHHHHHHhh
Q psy8856 232 E--RKIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSSLMGSTEISHQGGQKHCPSLSEIDQRFKEAF 307 (312)
Q Consensus 232 ~--~~~~~~~~~~~~~vdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~a~aa~~~~~~g~~~~~~~~~ev~~~~~~~~ 307 (312)
+ +.+++|+++++ ++||+||||+|.|||++++++|+++++|+++|+++|+.++++.|+....|+.+|+++++++..
T Consensus 254 ~~~~~~~~~~~~v~-vvDttGAGDaF~ag~~~~l~~g~~~~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev~~~l~~~~ 330 (343)
T 2rbc_A 254 DDPTVHFQTTMQVE-AVDTLAAGDIFHGTFALAMAEGMQSRAAVRLSSVAAALKCTVFGGRIGAPTREETEEAMRQWL 330 (343)
T ss_dssp TCCCEEEECCCCCC-CSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSGGGGCCCHHHHHHHHHHHH
T ss_pred CCceeEEecCCCCc-cccCCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCCCCccCCCCHHHHHHHHHhcc
Confidence 6 78899999986 999999999999999999999999999999999999999999998766799999999988754
No 9
>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} SCOP: c.72.1.0 PDB: 3k9e_A
Probab=100.00 E-value=1.2e-45 Score=328.82 Aligned_cols=293 Identities=17% Similarity=0.172 Sum_probs=236.8
Q ss_pred cEeeecceeeeeEEecCCcccCCCCccccccceeeeecCCcccccCCchHHHHHHHHHhCCCceEEEEeecC--hHHHHH
Q psy8856 2 NSLICGSLAFDNIMRFEGKFSNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLLNGNPLIVSILGKD--GSSYLK 79 (312)
Q Consensus 2 ~i~~~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~~~~~~~vG~d--~~~i~~ 79 (312)
||+++|++++|.+...++. +. ..........+||++.|+|.+|++||.++.++|.+|+| |+.+++
T Consensus 5 ~i~viG~~~~D~~~~~~~~-------~~------~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~g~~i~~ 71 (330)
T 3iq0_A 5 KVFTIGEILVEIMASKIGQ-------PF------DQPGIWNGPYPSGAPAIFIDQVTRLGVPCGIISCVGNDGFGDINIH 71 (330)
T ss_dssp EEEEESCCEEEEEEEEETC-------CS------SSCEEEEEEEEECHHHHHHHHHHHTTCCEEEEEEEESSHHHHHHHH
T ss_pred CEEEEcceeEEEeccCCCC-------Cc------cccccccCcCCCCHHHHHHHHHHHCCCcEEEEEEeCCChHHHHHHH
Confidence 7999999999999764411 00 00001124678999999999999999999999999999 788999
Q ss_pred HHHHcCCccceeeecCCcccceEEEEEecCCCeeEEEe-C-CccccCCccccCC--cCCceEEEECCCC------hHHHH
Q psy8856 80 HLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIFH-P-GAMQLSYDDNCIN--NADIKIAIISPDN------CCNMI 149 (312)
Q Consensus 80 ~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~--~~~~~~~~~~~~~------~~~~~ 149 (312)
.|++.||+++++.+.++.+|+.+++.+++++++.+.+. . +....++++++.. ++.++++++++.. .+.+.
T Consensus 72 ~l~~~gv~~~~v~~~~~~~T~~~~i~~~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~v~~sg~~~~~~~~~~~~~ 151 (330)
T 3iq0_A 72 RLAADGVDIRGISVLPLEATGSAFVTYHNSGDRDFIFNIKNAACGKLSAQHVDENILKDCTHFHIMGSSLFSFHMVDAVK 151 (330)
T ss_dssp HHHHTTCBCTTEEEETTSCCEEEEEEECC---CEEEEECTTSGGGGCCGGGCCGGGGTTEEEEEEEGGGCSSHHHHHHHH
T ss_pred HHHHcCCCeeeEEEcCCCCceEEEEEECCCCCeeEEEeccCChhhhCCHhhCCHhHhccCCEEEEechhhcCcchHHHHH
Confidence 99999999999988788899999999988888743333 2 2344455555543 5788999987532 35678
Q ss_pred HHHHHHHhcCCcEEEcCCCCcccCC----HHHHHHHhhcccEEEeCHHHHHHhhcCCCCC--HHHHh-hcCCEEEEeeCC
Q psy8856 150 KHIKKILKLKIPFIFDPGQSLSMFT----KEELIKIIKKSSYIIVNEYESKLLVSKTSLS--LQKIN-EQVKVLIVTRGE 222 (312)
Q Consensus 150 ~~~~~~~~~~~~v~~D~~~~~~~~~----~~~l~~ll~~~dvl~~n~~E~~~l~~~~~~~--~~~l~-~g~~~vvvt~G~ 222 (312)
++++.+++.+.++++||+++...|. .+.+.++++++|++++|++|++.+++..+.. .+.+. .+++.++||+|+
T Consensus 152 ~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~~l~~~g~~~vvvT~G~ 231 (330)
T 3iq0_A 152 KAVTIVKANGGVISFDPNIRKEMLDIPEMRDALHFVLELTDIYMPSEGEVLLLSPHSTPERAIAGFLEEGVKEVIVKRGN 231 (330)
T ss_dssp HHHHHHHHTTCEEEEECCCCGGGGGSHHHHHHHHHHHHTCSEECCBGGGTTTTCSCSSHHHHHHHHHHHTCSEEEEECGG
T ss_pred HHHHHHHHcCCEEEEcCCCCccccCcHHHHHHHHHHHhhCCEEecCHHHHHHHhCCCCHHHHHHHHHHcCCCEEEEEeCC
Confidence 8888899999999999998876664 3456788999999999999999998864321 12333 389999999999
Q ss_pred CceEEEecCCceEEcCCcccCCcCCCCCchhhhHHHHHHHHHcCCCHHHHHHHHHHHhchheeeccCCCCCCChHHHHHH
Q psy8856 223 LGSDIFLNNERKIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSSLMGSTEISHQGGQKHCPSLSEIDQR 302 (312)
Q Consensus 223 ~G~~~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~a~aa~~~~~~g~~~~~~~~~ev~~~ 302 (312)
+|++++++ ++.+++|+++++ ++||+||||+|.|||++++.+|+++++|+++|+++|+++|++.|+..+.|+++|++++
T Consensus 232 ~G~~~~~~-~~~~~~~~~~v~-vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev~~~ 309 (330)
T 3iq0_A 232 QGASYYSA-NEQFHVESYPVE-EVDPTGAGDCFGGAWIACRQLGFDAHRALQYANACGALAVTRRGPMEGTSRLMEIETF 309 (330)
T ss_dssp GCEEEECS-SCEEEECCCCCC-CSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTSCSSSTTCCCHHHHHHH
T ss_pred CceEEEEC-CceEEecCCCCc-cCCCCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHH
Confidence 99999998 889999999986 9999999999999999999999999999999999999999999997778999999999
Q ss_pred HHHhhcc
Q psy8856 303 FKEAFGY 309 (312)
Q Consensus 303 ~~~~~~~ 309 (312)
+++...+
T Consensus 310 ~~~~~~~ 316 (330)
T 3iq0_A 310 IQRHDMS 316 (330)
T ss_dssp HHHC---
T ss_pred HHhcccc
Confidence 9886544
No 10
>1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A*
Probab=100.00 E-value=4.2e-45 Score=322.50 Aligned_cols=288 Identities=17% Similarity=0.241 Sum_probs=243.6
Q ss_pred CcEeeecceeeeeEEecCCcccCCCCccccccceeeeecCCcccccCCchHHHHHHHHHhCCCceEEEEeecC--hHHHH
Q psy8856 1 MNSLICGSLAFDNIMRFEGKFSNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLLNGNPLIVSILGKD--GSSYL 78 (312)
Q Consensus 1 m~i~~~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~~~~~~~vG~d--~~~i~ 78 (312)
|+|+++|++++|.+..++ ++|. +++ +.+.......+||++.|+|.+|++||.++.++|.+|+| |+.++
T Consensus 5 ~~v~viG~~~iD~~~~~~-~~p~---~g~------~~~~~~~~~~~GG~~~N~A~~la~lG~~~~~~~~vG~D~~g~~i~ 74 (309)
T 1rkd_A 5 GSLVVLGSINADHILNLQ-SFPT---PGE------TVTGNHYQVAFGGKGANQAVAAGRSGANIAFIACTGDDSIGESVR 74 (309)
T ss_dssp CEEEEECCCEEEEEEECS-SCCC---TTC------CCCCCCEEEEEECHHHHHHHHHHHHTCEEEEEEEEESSTTHHHHH
T ss_pred CeEEEECcceEeEEEecC-CCCC---CCC------eeecCceeecCCCHHHHHHHHHHhCCCceEEEEEECCCHHHHHHH
Confidence 369999999999999988 7754 222 33345567889999999999999999999999999999 78899
Q ss_pred HHHHHcCCccceeeecCCcccceEEEEEecCCCeeEEEeCCccccCCccccCC----cCCceEEEECCCC-hHHHHHHHH
Q psy8856 79 KHLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIFHPGAMQLSYDDNCIN----NADIKIAIISPDN-CCNMIKHIK 153 (312)
Q Consensus 79 ~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~ 153 (312)
+.|++.||+++++.+.++.+|+.+++.+++++++.+....++...++++++.. +..+++++++... .+.+..+++
T Consensus 75 ~~L~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 154 (309)
T 1rkd_A 75 QQLATDNIDITPVSVIKGESTGVALIFVNGEGENVIGIHAGANAALSPALVEAQRERIANASALLMQLESPLESVMAAAK 154 (309)
T ss_dssp HHHHTTTEECTTEEEETTCCCEEEEEEECTTSCEEEEEECGGGGGCCHHHHHTTHHHHHHCSEEEECSSSCHHHHHHHHH
T ss_pred HHHHHcCCCccceEecCCCCCceEEEEECCCCCeEEEEeCCchhcCCHHHHHHHHHhcccCCEEEEeCCCCHHHHHHHHH
Confidence 99999999999988777789999999999888888777777665666655543 4578899997654 467778888
Q ss_pred HHHhcCCcEEEcCCCCcccCCHHHHHHHhhcccEEEeCHHHHHHhhcCCCCCH-------HHHh-hcCCEEEEeeCCCce
Q psy8856 154 KILKLKIPFIFDPGQSLSMFTKEELIKIIKKSSYIIVNEYESKLLVSKTSLSL-------QKIN-EQVKVLIVTRGELGS 225 (312)
Q Consensus 154 ~~~~~~~~v~~D~~~~~~~~~~~~l~~ll~~~dvl~~n~~E~~~l~~~~~~~~-------~~l~-~g~~~vvvt~G~~G~ 225 (312)
.+++.+.++++||++... +. .++++++|++++|++|++.|++....+. +.+. .+++.++||.|++|+
T Consensus 155 ~a~~~g~~v~~D~~~~~~-~~----~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~ 229 (309)
T 1rkd_A 155 IAHQNKTIVALNPAPARE-LP----DELLALVDIITPNETEAEKLTGIRVENDEDAAKAAQVLHEKGIRTVLITLGSRGV 229 (309)
T ss_dssp HHHHTTCEEEECCCSCCC-CC----HHHHTTCSEECCCHHHHHHHHSCCCSSHHHHHHHHHHHHHTTCSEEEEECGGGCE
T ss_pred HHHHcCCEEEEECCcccc-ch----HHHHhhCCEEEcCHHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCEEEEEECCCcE
Confidence 889899999999987632 22 4688999999999999999998753322 2232 389999999999999
Q ss_pred EEEecCCceEEcCCcccCCcCCCCCchhhhHHHHHHHHHcCCCHHHHHHHHHHHhchheeeccCCCCCCChHHHHHHHHH
Q psy8856 226 DIFLNNERKIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSSLMGSTEISHQGGQKHCPSLSEIDQRFKE 305 (312)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~a~aa~~~~~~g~~~~~~~~~ev~~~~~~ 305 (312)
+++++ ++.+++|+++++ ++||+||||+|.|+|++++.+|+++++|+++|+++|+.++++.|+....|+++|+++++++
T Consensus 230 ~~~~~-~~~~~~~~~~v~-~vdt~GAGD~f~a~~~~~l~~g~~~~~a~~~a~~~aa~~~~~~G~~~~~p~~~ev~~~~~~ 307 (309)
T 1rkd_A 230 WASVN-GEGQRVPGFRVQ-AVDTIAAGDTFNGALITALLEEKPLPEAIRFAHAAAAIAVTRKGAQPSVPWREEIDAFLDR 307 (309)
T ss_dssp EEEET-TEEEEECCCCCC-CSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSSGGGCCCHHHHHHHHHT
T ss_pred EEEeC-CceEEcCCCCCC-cCCCCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCCCccCCCCCHHHHHHHHhc
Confidence 99988 888999999986 9999999999999999999999999999999999999999999997668999999998864
No 11
>3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii}
Probab=100.00 E-value=5.5e-46 Score=330.67 Aligned_cols=287 Identities=24% Similarity=0.261 Sum_probs=217.9
Q ss_pred CcEeeecceeeeeEEecCCcccCCCCccccccceeeeecCCcccccCCchHHHHHHHHHhCCCceEEEEeecC--hHHHH
Q psy8856 1 MNSLICGSLAFDNIMRFEGKFSNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLLNGNPLIVSILGKD--GSSYL 78 (312)
Q Consensus 1 m~i~~~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~~~~~~~vG~d--~~~i~ 78 (312)
|+|+++|+.++|++...+ ++|. . +.......+||++.|+|.+|++||.++.++|.+|+| |+.++
T Consensus 22 ~~v~viG~~~~D~~~~~~-~~p~-----~--------~~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~g~~i~ 87 (327)
T 3hj6_A 22 LDVVSLGEILVDMISTEE-VNSL-----S--------QSREYTRHFGGSPANIAVNLSRLGKKVALISRLGADAFGNYLL 87 (327)
T ss_dssp CCEEEESCCEEEEECCCC-CSSG-----G--------GCCEEEEEEECHHHHHHHHHHHTTCCEEEECEEESSHHHHHHH
T ss_pred CCEEEEccceEEEeccCC-CCCc-----c--------ccceeeeecCcHHHHHHHHHHHcCCcEEEEEEeCCCHHHHHHH
Confidence 689999999999998777 5542 1 234457889999999999999999999999999999 78899
Q ss_pred HHHHHcCCccceeeecCCcccceEEEEEecCCCeeEEEeCCccccCCccccCC--cCCceEEEECCC------ChHHHHH
Q psy8856 79 KHLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIFHPGAMQLSYDDNCIN--NADIKIAIISPD------NCCNMIK 150 (312)
Q Consensus 79 ~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~------~~~~~~~ 150 (312)
+.|++.||+++++.+.++.+|+.+++..+ ++++.+..++++...++.+++.. ++.++++++++. ..+.+.+
T Consensus 88 ~~l~~~gv~~~~v~~~~~~~t~~~~v~~~-~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~v~~~g~~l~~~~~~~~~~~ 166 (327)
T 3hj6_A 88 DVLKGEQIITDGIQQDKERRTTIVYVSKS-TRTPDWLPYREADMYLQEDDIIFELIKRSKVFHLSTFILSRKPARDTAIK 166 (327)
T ss_dssp HHHHHTTCBCTTCEEESSSCCCEEEECCC-TTCCCEEEECSGGGGCCSCCCHHHHHC--CEEEEESHHHHSHHHHHHHHH
T ss_pred HHHHHcCCCcccEEEcCCCCceEEEEEec-CCCccEEEecChhhhCChhhcCHhHhccCCEEEECchHhcCchhHHHHHH
Confidence 99999999999998777788998877666 46666666666655555544332 568899998863 2367778
Q ss_pred HHHHHHhcCCcEEEcCCCCcccCC-----HHHHHHHhhcccEEEeCHHHHHHhhcCCCCC--HHHHh-hcCCEEEEeeCC
Q psy8856 151 HIKKILKLKIPFIFDPGQSLSMFT-----KEELIKIIKKSSYIIVNEYESKLLVSKTSLS--LQKIN-EQVKVLIVTRGE 222 (312)
Q Consensus 151 ~~~~~~~~~~~v~~D~~~~~~~~~-----~~~l~~ll~~~dvl~~n~~E~~~l~~~~~~~--~~~l~-~g~~~vvvt~G~ 222 (312)
+++.+++.+.++++||+++...|. .+.+.++++++|++++|++|++.+++..+.. .+.+. .+++.++||+|+
T Consensus 167 ~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~~l~~~g~~~vvvt~G~ 246 (327)
T 3hj6_A 167 AFNYAREQGKIVCFDPCYRKVLWPEGDDGAGVVEEIISRADFVKPSLDDARHLFGPDSPENYVKRYLELGVKAVILTLGE 246 (327)
T ss_dssp HHHHHHHTTCEEEEECCCCGGGSCSSSCSHHHHHHHHTTCSEECCBHHHHHHHHTTSCSSGGGGGGTTTTCSEEEEECST
T ss_pred HHHHHHHCCCEEEEECCCchhhcCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhCCCCHHHHHHHHHhCCCCEEEEEECC
Confidence 889999999999999998776664 5678899999999999999999999874332 23343 389999999999
Q ss_pred CceEEEecCCceEEcCCcccCCcCCCCCchhhhHHHHHHHHHcCCCHHHHHHHHHHHhchheeeccCCCCCCChHHHHHH
Q psy8856 223 LGSDIFLNNERKIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSSLMGSTEISHQGGQKHCPSLSEIDQR 302 (312)
Q Consensus 223 ~G~~~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~a~aa~~~~~~g~~~~~~~~~ev~~~ 302 (312)
+|++++++ ++.+++|+++++ ++||+||||+|.|||++++.+|+++++|+++|+++|++++++.|+..+.|+++|++++
T Consensus 247 ~G~~~~~~-~~~~~~~~~~v~-vvdttGAGDaf~ag~~~~l~~g~~~~~a~~~A~a~aa~~v~~~G~~~~~p~~~ev~~~ 324 (327)
T 3hj6_A 247 EGVIASDG-EEIIRIPAFSED-AVDVTGAGDAFWSGFICGLLDGYTVKRSIKLGNGVAAFKIRGVGALSPVPSKEDIIKE 324 (327)
T ss_dssp TCEEEECS-SCEEESCSSTTC------CCHHHHHHHHHHTTSSCSTTHHHHHHHHCCCSSCC------------------
T ss_pred CceEEEeC-CeeEEcCCcccc-cCCCcChhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Confidence 99999998 889999999986 9999999999999999999999999999999999999999999998778999999998
Q ss_pred HH
Q psy8856 303 FK 304 (312)
Q Consensus 303 ~~ 304 (312)
++
T Consensus 325 l~ 326 (327)
T 3hj6_A 325 YN 326 (327)
T ss_dssp --
T ss_pred hc
Confidence 75
No 12
>3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens}
Probab=100.00 E-value=1.6e-45 Score=327.86 Aligned_cols=289 Identities=21% Similarity=0.214 Sum_probs=240.9
Q ss_pred CcEeeecceeeeeEEecCCcccCCCCccccccceeeeecCCcccccCCchHHHHHHHHHhCCCceEEEEeecC--hHHHH
Q psy8856 1 MNSLICGSLAFDNIMRFEGKFSNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLLNGNPLIVSILGKD--GSSYL 78 (312)
Q Consensus 1 m~i~~~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~~~~~~~vG~d--~~~i~ 78 (312)
|+|+++|+.++|++..++ ++|. +++ +... .....+||++.|+|.+|++||.++.++|.+|+| |+.++
T Consensus 7 ~~v~viG~~~vD~~~~~~-~~~~---~g~------~~~~-~~~~~~GG~~~NvA~~la~LG~~v~~i~~vG~D~~g~~i~ 75 (328)
T 3kzh_A 7 PYLLVFGASVVDVFGFSK-ASYR---PYN------STPG-HVKISFGGVCRNIAENMARVGVNTNFMSILGNDEHGKSIV 75 (328)
T ss_dssp CCEEEECCCEEEEEEEES-SCCC---TTS------EEEE-EEEEEEECHHHHHHHHHHHTTCCEEEECEECSSHHHHHHH
T ss_pred CcEEEECcEEeeeeeccC-CCCC---CCC------CceE-EEEEccCcHHHHHHHHHHHcCCCcEEEEEecCcHHHHHHH
Confidence 589999999999999998 6653 222 2222 457889999999999999999999999999999 78899
Q ss_pred HHHHHcCCccceeeecCCcccceEEEEEecCCCeeEEE-eCCccccCCccccC----CcCCceEEEECCCChHHHHHHHH
Q psy8856 79 KHLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIF-HPGAMQLSYDDNCI----NNADIKIAIISPDNCCNMIKHIK 153 (312)
Q Consensus 79 ~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 153 (312)
+.|++.||+++++...++.+|+.+++++++++++.+.. ..+....++++.+. .+..++++++++..++.+..+++
T Consensus 76 ~~L~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 155 (328)
T 3kzh_A 76 EHSKKIGYHMDDSMVIEGGSTPTYLAILDENGEMVSAIADMKSIGAMNTDFIDSKREIFENAEYTVLDSDNPEIMEYLLK 155 (328)
T ss_dssp HHHHHHTEECTTCEECTTCCCCEEEEEECTTSCEEEEEEECGGGGGCCHHHHHHTHHHHHTCSEEEEESSCHHHHHHHHH
T ss_pred HHHHHcCCCccceEEeCCCCCeeEEEEEcCCCCEEEEEEchhhhhhCCHHHHHHHHHhhccCCEEEEeCCcHHHHHHHHH
Confidence 99999999999887777889999999999888887644 34444445544432 24678899999888766556665
Q ss_pred HHHhcCCcEEEcCCCCcccCCHHHHHHHhhcccEEEeCHHHHHHhhcCCCCCHH-------HHhh-cCCEEEEeeCCCce
Q psy8856 154 KILKLKIPFIFDPGQSLSMFTKEELIKIIKKSSYIIVNEYESKLLVSKTSLSLQ-------KINE-QVKVLIVTRGELGS 225 (312)
Q Consensus 154 ~~~~~~~~v~~D~~~~~~~~~~~~l~~ll~~~dvl~~n~~E~~~l~~~~~~~~~-------~l~~-g~~~vvvt~G~~G~ 225 (312)
+++.+.++++||++... .+.+.++++++|++++|++|++.+++....+.+ .+.+ +++.++||+|++|+
T Consensus 156 -a~~~~~~v~~D~~~~~~---~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~ 231 (328)
T 3kzh_A 156 -NFKDKTNFILDPVSAEK---ASWVKHLIKDFHTIKPNRHEAEILAGFPITDTDDLIKASNYFLGLGIKKVFISLDADGI 231 (328)
T ss_dssp -HHTTTSEEEEECCSHHH---HHTSTTTGGGCSEECCBHHHHHHHHTSCCCSHHHHHHHHHHHHHHTCCEEEEECGGGCE
T ss_pred -HhhcCCcEEEEeCCHHH---HHHHHHHhcCCcEEeCCHHHHHHHHCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCE
Confidence 77889999999985321 233567889999999999999999987543322 2322 89999999999999
Q ss_pred EEEecCCceEEcCCcccCCcCCCCCchhhhHHHHHHHHHcCCCHHHHHHHHHHHhchheeeccCCCCCCChHHHHHHHHH
Q psy8856 226 DIFLNNERKIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSSLMGSTEISHQGGQKHCPSLSEIDQRFKE 305 (312)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~a~aa~~~~~~g~~~~~~~~~ev~~~~~~ 305 (312)
+++++ ++.+++|+++++ ++||+||||+|.|||++++++|+++++|+++|+++|+++|++.|+..+.|+++|+++++++
T Consensus 232 ~~~~~-~~~~~~~~~~v~-vvdttGAGDaf~ag~~~~l~~g~~~~~a~~~A~a~aa~~v~~~G~~~~~~~~~~v~~~~~~ 309 (328)
T 3kzh_A 232 FYNDG-VSCGKIKATEVD-VKNVTGAGDSFVAGLGYGYMNKMPIEDIVKFAMTMSNITISHEETIHPDMALDTVLAKLEK 309 (328)
T ss_dssp EEECS-SCEEEEEESSCC-CSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSSSCTTCSHHHHHHHHHT
T ss_pred EEEeC-CceEEecCCCcc-cCCCCChhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCCCCCCcCCHHHHHHHhhh
Confidence 99988 888999999986 9999999999999999999999999999999999999999999999889999999999986
Q ss_pred h
Q psy8856 306 A 306 (312)
Q Consensus 306 ~ 306 (312)
.
T Consensus 310 ~ 310 (328)
T 3kzh_A 310 T 310 (328)
T ss_dssp C
T ss_pred c
Confidence 3
No 13
>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP}
Probab=100.00 E-value=2.3e-45 Score=327.68 Aligned_cols=286 Identities=15% Similarity=0.177 Sum_probs=226.6
Q ss_pred CcEeeecceeeeeEEecCCcccCCCCccccccceeeeecCCcccccCCchHHHHHHHHHhCCCceEEEEeecC--hHHHH
Q psy8856 1 MNSLICGSLAFDNIMRFEGKFSNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLLNGNPLIVSILGKD--GSSYL 78 (312)
Q Consensus 1 m~i~~~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~~~~~~~vG~d--~~~i~ 78 (312)
|+|+++|++++|++...++. ..+.......+||++.|+|.+|++||.++.++|.+|+| |+.++
T Consensus 27 ~~vlviG~~~iD~~~~~~g~---------------~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~G~~i~ 91 (336)
T 4du5_A 27 LDVITFGEAMMLLVADRPGP---------------LEHAEAFHKRTAGAETNVAIGLARLGLKVGWASRLGTDSMGRYLL 91 (336)
T ss_dssp EEEEEECCCEEEEEESSSSC---------------GGGCCEEEEEEECHHHHHHHHHHHTTCCEEEEEEECSSHHHHHHH
T ss_pred CCEEEEChhhhhccCCCCCc---------------cchhhheeecCCCHHHHHHHHHHhCCCcEEEEEEeCCCHHHHHHH
Confidence 57999999999998655421 22344557889999999999999999999999999999 78899
Q ss_pred HHHHHcCCccceeeecCCcccceEEEEEecCC-CeeEEEe--CCccccCCccccCC--cCCceEEEECCCC-------hH
Q psy8856 79 KHLKYLGISNKYIQKINSMFTAQCFIVTDVNN-NQITIFH--PGAMQLSYDDNCIN--NADIKIAIISPDN-------CC 146 (312)
Q Consensus 79 ~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~--~~~~~~~~~~~~~-------~~ 146 (312)
+.|++.||+++++.+.++.+|+.+++..++++ ++.+.++ .++...++++++.. ++.++++++++.. .+
T Consensus 92 ~~L~~~GV~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~a~~~l~~~~~~~~~l~~~~~v~~~g~~~~~~~~~~~ 171 (336)
T 4du5_A 92 AAMAAEGIDCSHVVCDATQKTGFQFKGKVTDGSDPPVEYHRKGSAASHMGVADIDEAWLLSARHLHATGVFPAISATTLP 171 (336)
T ss_dssp HHHHTTTCEEEEEEECTTSCCCEEEECCCSCC--CCEEEECTTCTGGGCCGGGCCHHHHTTEEEEEEESSGGGSCTTHHH
T ss_pred HHHHHcCCCcceEEEcCCCCcEEEEEEEcCCCCcceEEEECCCChhHhCChhhCCHhHhccCCEEEEcCchhhCChHHHH
Confidence 99999999999998888889999999888777 4444333 34555566666643 5688999876532 25
Q ss_pred HHHHHHHHHHhcCCcEEEcCCCCcccCCH-----HHHHHHhhcccEEEeCHHHHHHhhcCCCCC--HHHHhh-cCCEEEE
Q psy8856 147 NMIKHIKKILKLKIPFIFDPGQSLSMFTK-----EELIKIIKKSSYIIVNEYESKLLVSKTSLS--LQKINE-QVKVLIV 218 (312)
Q Consensus 147 ~~~~~~~~~~~~~~~v~~D~~~~~~~~~~-----~~l~~ll~~~dvl~~n~~E~~~l~~~~~~~--~~~l~~-g~~~vvv 218 (312)
.+.++++.+++.+.++++||+.+...|.. +.+.++++++|++++|++|++.|++..+.. .+.+.+ +++.++|
T Consensus 172 ~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~pN~~Ea~~l~g~~~~~~~~~~l~~~g~~~vvv 251 (336)
T 4du5_A 172 AARKTMDLMRAAGRSVSFDPNLRPTLWATPELMRDAINDLATRADWVLPGMEEGRFLTGETTPEGVARFYRQLGAKLVVV 251 (336)
T ss_dssp HHHHHHHHHHHTTCEEEEECCCCGGGSSSHHHHHHHHHHHHTTCSEECCBHHHHHHHHCCCSHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHCCCEEEEeCcCCchhcCChHHHHHHHHHHHHhCCEEECCHHHHHHHhCCCCHHHHHHHHHhcCCCEEEE
Confidence 67788888999999999999988777753 346788999999999999999999865321 123333 8999999
Q ss_pred eeCCCceEEEecCCceEEcCCcccCCcCCCCCchhhhHHHHHHHHHcCCCHHHHHHHHHHHhchheeeccCCCCCCChHH
Q psy8856 219 TRGELGSDIFLNNERKIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSSLMGSTEISHQGGQKHCPSLSE 298 (312)
Q Consensus 219 t~G~~G~~~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~a~aa~~~~~~g~~~~~~~~~e 298 (312)
|.|++|++++++ ++.+++|++++++++||+||||+|.|||++++++|+++++|+++|+++|+++|++.|+..+.|+++|
T Consensus 252 t~G~~G~~~~~~-~~~~~~~~~~v~~vvdttGAGDaf~a~~~~~l~~g~~l~~a~~~A~~~aa~~v~~~G~~~~~p~~~e 330 (336)
T 4du5_A 252 KLGAEGAYFDGE-AGSGRVAGFPVAEVVDTVGAGDGFAVGVISALLDGLGVPEAVKRGAWIGARAVQVLGDSEGLPTRAE 330 (336)
T ss_dssp ECGGGCEEEEET-TEEEEECCCCC-------CHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHC------CCCCHHH
T ss_pred EecCCceEEEEC-CeEEEeCCccCCCCCCCccchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCCCccCCCCHHH
Confidence 999999999988 8999999998855899999999999999999999999999999999999999999999888999999
Q ss_pred HHHH
Q psy8856 299 IDQR 302 (312)
Q Consensus 299 v~~~ 302 (312)
++++
T Consensus 331 v~~~ 334 (336)
T 4du5_A 331 LNAA 334 (336)
T ss_dssp HHCC
T ss_pred HHhc
Confidence 9764
No 14
>3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} SCOP: c.72.1.0
Probab=100.00 E-value=7e-45 Score=322.52 Aligned_cols=289 Identities=18% Similarity=0.221 Sum_probs=236.8
Q ss_pred CcEeeecceeeeeEEecCCcccCCCCccccccceeeeecCCcccccCCchHHHHHHHHHhCCCceEEEEeecC--hHHHH
Q psy8856 1 MNSLICGSLAFDNIMRFEGKFSNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLLNGNPLIVSILGKD--GSSYL 78 (312)
Q Consensus 1 m~i~~~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~~~~~~~vG~d--~~~i~ 78 (312)
|+|+++|+.++|++...+ ..|. . +.......+||++.|+|.+|++||.++.++|.+|+| |+.++
T Consensus 9 ~~v~~iG~~~~D~~~~~~-~~p~-----~--------~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~g~~i~ 74 (319)
T 3pl2_A 9 HEVLAIGRLGVDIYPLQS-GVGL-----A--------DVQSFGKYLGGSAANVSVAAARHGHNSALLSRVGNDPFGEYLL 74 (319)
T ss_dssp CSEEEESCCEEEECBSSS-SCCG-----G--------GCCCBCCEEECHHHHHHHHHHHTTCCEEEEEEEESSHHHHHHH
T ss_pred CCEEEEChhheeeecccC-CCCc-----c--------ccceeeecCCCcHHHHHHHHHHCCCceEEEEEeCCCHHHHHHH
Confidence 579999999999987665 4431 0 234567889999999999999999999999999999 78899
Q ss_pred HHHHHcCCccceeeecCCcccceEEEEEecCCCeeEEEeCC--c-cccCCccccC--CcCCceEEEECCCC------hHH
Q psy8856 79 KHLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIFHPG--A-MQLSYDDNCI--NNADIKIAIISPDN------CCN 147 (312)
Q Consensus 79 ~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~--~~~~~~~~~~~~~~------~~~ 147 (312)
+.|+++||+++++.+.++.+|+.+++.++.++++.+.++.+ . ...++++++. .+..++++++++.. .+.
T Consensus 75 ~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 154 (319)
T 3pl2_A 75 AELERLGVDNQYVATDQTFKTPVTFCEIFPPDDFPLYFYREPKAPDLNIESADVSLDDVREADILWFTLTGFSEEPSRGT 154 (319)
T ss_dssp HHHHHTTEECTTEEEESSSCCCEEEECCBTTTBCCEEEECCSCCGGGGCCGGGSCHHHHHHCSEEEEEGGGGSSTTHHHH
T ss_pred HHHHHcCCccccEEecCCCCceEEEEEEcCCCCeeEEEecCCCcccccCChhhCCHHHhccCCEEEEecccccCchhHHH
Confidence 99999999999998878889999999888777776655533 3 3345555553 25678899887431 234
Q ss_pred HHHHHHHHHhcCCcEEEcCCCCcccCC-----HHHHHHHhhcccEEEeCHHHHHHhhcCCCCC--HHHHhh-cCCEEEEe
Q psy8856 148 MIKHIKKILKLKIPFIFDPGQSLSMFT-----KEELIKIIKKSSYIIVNEYESKLLVSKTSLS--LQKINE-QVKVLIVT 219 (312)
Q Consensus 148 ~~~~~~~~~~~~~~v~~D~~~~~~~~~-----~~~l~~ll~~~dvl~~n~~E~~~l~~~~~~~--~~~l~~-g~~~vvvt 219 (312)
...+++.+++ +.++++|++++...|. .+.+.++++++|++++|++|++.+++..+.. .+.+.+ +++.++||
T Consensus 155 ~~~~~~~~~~-~~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~~l~~~g~~~vvvt 233 (319)
T 3pl2_A 155 HREILTTRAN-RRHTIFDLDYRPMFWESPEEATKQAEWALQHSTVAVGNKEECEIAVGETEPERAGRALLERGVELAIVK 233 (319)
T ss_dssp HHHHHHHHTT-CSCEEEECCCCGGGSSCHHHHHHHHHHHHTTCSEEEECHHHHHHHHSCCSHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHH-CCcEEEeCCCChhhcCCHHHHHHHHHHHHHhCCEEEcCHHHHHHHcCCCCHHHHHHHHHhcCCCEEEEE
Confidence 4555555544 6788999999887775 4557789999999999999999999875321 223433 89999999
Q ss_pred eCCCceEEEecCCceEEcCCcccCCcCCCCCchhhhHHHHHHHHHcCCCHHHHHHHHHHHhchheeeccCCCCCCChHHH
Q psy8856 220 RGELGSDIFLNNERKIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSSLMGSTEISHQGGQKHCPSLSEI 299 (312)
Q Consensus 220 ~G~~G~~~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~a~aa~~~~~~g~~~~~~~~~ev 299 (312)
+|++|++++++ ++.+++|+++++ ++||+||||+|.|||++++.+|+++++|+++|+++|++++++.|+..+.|+++|+
T Consensus 234 ~G~~G~~~~~~-~~~~~~~~~~v~-vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev 311 (319)
T 3pl2_A 234 QGPKGVMAMTK-DETVEVPPFFVD-VINGLGAGDAFGGALCHGLLSEWPLEKVLRFANTAGALVASRLECSTAMPTTDEV 311 (319)
T ss_dssp EETTEEEEECS-SCEEEECCCCCC-CSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSCSGGGCCCHHHH
T ss_pred ECCCCeEEEEC-CceEEeCCcccC-CCCCcCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhccCCcCCCCCHHHH
Confidence 99999999998 889999999986 9999999999999999999999999999999999999999999987668999999
Q ss_pred HHHHHHh
Q psy8856 300 DQRFKEA 306 (312)
Q Consensus 300 ~~~~~~~ 306 (312)
++++++.
T Consensus 312 ~~~l~~~ 318 (319)
T 3pl2_A 312 EASLNQK 318 (319)
T ss_dssp HHHCC--
T ss_pred HHHHhcc
Confidence 9988653
No 15
>3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A*
Probab=100.00 E-value=7e-45 Score=323.26 Aligned_cols=299 Identities=18% Similarity=0.183 Sum_probs=234.9
Q ss_pred CcEeeecceeeeeEEecCCcccCCCCccccccceeeeecCCcccccCCchHHHHHHHHHhCCCceEEEEeecC--hHHHH
Q psy8856 1 MNSLICGSLAFDNIMRFEGKFSNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLLNGNPLIVSILGKD--GSSYL 78 (312)
Q Consensus 1 m~i~~~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~~~~~~~vG~d--~~~i~ 78 (312)
|+|+++|++++|++.......+. ..+ ..........+||++.|+|.+|++||.++.++|.+|+| |+.++
T Consensus 6 ~~v~~iG~~~~D~~~~~~~~~~~--~~~-------~~p~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~G~~i~ 76 (325)
T 3h49_A 6 LDVICIGAAIVDIPLQPVSKNIF--DVD-------SYPLERIAMTTGGDAINEATIISRLGHRTALMSRIGKDAAGQFIL 76 (325)
T ss_dssp EEEEEESCCEEEEEECSCCGGGG--GSS-------CCCCSCCCCEEESHHHHHHHHHHHTTCEEEEECEEESSHHHHHHH
T ss_pred CeEEEEChhhheeeccCCCCccc--ccc-------ccchheeEEccCcHHHHHHHHHHHCCCCeEEEEEECCChHHHHHH
Confidence 57999999999997554311100 000 00113457889999999999999999999999999999 78899
Q ss_pred HHHHHcCCccceeeecCCcccceEEEEEecCCCeeEEEeCCcc-ccCCccccC--CcCCceEEEECCC------ChHHHH
Q psy8856 79 KHLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIFHPGAM-QLSYDDNCI--NNADIKIAIISPD------NCCNMI 149 (312)
Q Consensus 79 ~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~------~~~~~~ 149 (312)
+.|++.||+++++.+.++.+|+.+++++++++++.+....+.. ..++.+++. .+..++++++++. ..+.+.
T Consensus 77 ~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 156 (325)
T 3h49_A 77 DHCRKENIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRNGSLWKLNIDDVDFARFSQAKLLSLASIFNSPLLDGKALT 156 (325)
T ss_dssp HHHHHHTCBCSSCEEETTSCCCEEEEEECTTSCEEEECCTTSHHHHCCGGGCCGGGGGGCSEEEEEEETTSTTSCHHHHH
T ss_pred HHHHHcCCceeeEEecCCCCCceEEEEECCCCceeEEeccCcccccCChhhcChhhhccCCEEEEecccCCcccCHHHHH
Confidence 9999999999999887778999999999988988877665432 234444433 3567888887642 236778
Q ss_pred HHHHHHHhcCCcEEEcCCCCcccC-CHHHHHHHhhcccEEEeCHHHHHHhhcCCCCC--HHHHhh-cCCEEEEeeCCCce
Q psy8856 150 KHIKKILKLKIPFIFDPGQSLSMF-TKEELIKIIKKSSYIIVNEYESKLLVSKTSLS--LQKINE-QVKVLIVTRGELGS 225 (312)
Q Consensus 150 ~~~~~~~~~~~~v~~D~~~~~~~~-~~~~l~~ll~~~dvl~~n~~E~~~l~~~~~~~--~~~l~~-g~~~vvvt~G~~G~ 225 (312)
++++.+++.+ .+++|+..++..| ..+.+.++++++|++++|++|++.+++..... .+.+.+ +++.++||+|++|+
T Consensus 157 ~~~~~a~~~~-~~~~d~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~~l~~~g~~~vvvt~G~~G~ 235 (325)
T 3h49_A 157 EIFTQAKARQ-MIICADMIKPRLNETLDDICEALSYVDYLFPNFAEAKLLTGKETLDEIADCFLACGVKTVVIKTGKDGC 235 (325)
T ss_dssp HHHHHHHHTT-CEEEEEECCCSSCCCHHHHHHHHTTCSEEECBHHHHHHHHTCSSHHHHHHHHHTTTCSEEEEECTTSCE
T ss_pred HHHHHHHhcC-CEEEecCCchhhhhHHHHHHHHHhhCCEEecCHHHHHHHhCCCCHHHHHHHHHHcCCCEEEEEeCCCCe
Confidence 8888888887 5677776655555 35667889999999999999999999875321 122333 89999999999999
Q ss_pred EEEecCCceEEcCCcccCCcCCCCCchhhhHHHHHHHHHcCCCHHHHHHHHHHHhchheeeccCCCCCCChHHHHHHHHH
Q psy8856 226 DIFLNNERKIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSSLMGSTEISHQGGQKHCPSLSEIDQRFKE 305 (312)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~a~aa~~~~~~g~~~~~~~~~ev~~~~~~ 305 (312)
+++++ ++.+++|++++.+++||+||||+|.|||++++++|+++++|+++|+++|+++|++.|+..+.|+++|+++++++
T Consensus 236 ~~~~~-~~~~~~~~~~~~~vvDttGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev~~~l~~ 314 (325)
T 3h49_A 236 FIKRG-DMTMKVPAVAGITAIDTIGAGDNFASGFIAALLEGKNLRECARFANATAAISVLSVGATTGVKNRKLVEQLLEE 314 (325)
T ss_dssp EEEET-TEEEEECCCSSCCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSSSSSCSSSHHHHTC---
T ss_pred EEEEC-CeEEEecCcCCCCCcCCCChhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Confidence 99998 88899999886349999999999999999999999999999999999999999999998889999999999987
Q ss_pred hhccc
Q psy8856 306 AFGYR 310 (312)
Q Consensus 306 ~~~~~ 310 (312)
..++.
T Consensus 315 ~~~~~ 319 (325)
T 3h49_A 315 YEGEG 319 (325)
T ss_dssp -----
T ss_pred ccCCc
Confidence 66553
No 16
>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis}
Probab=100.00 E-value=1.6e-44 Score=323.65 Aligned_cols=288 Identities=13% Similarity=0.126 Sum_probs=239.2
Q ss_pred CcEeeecceeeeeEEecCCcccCCCCccccccceeeeecCCcccccCCchHHHHHHHHHhCCCceEEEEeecC--hHHHH
Q psy8856 1 MNSLICGSLAFDNIMRFEGKFSNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLLNGNPLIVSILGKD--GSSYL 78 (312)
Q Consensus 1 m~i~~~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~~~~~~~vG~d--~~~i~ 78 (312)
|+|+++|+.++|++.... ++ ..+.......+||++.|+|.+|++||.++.++|.+|+| |+.++
T Consensus 3 ~~v~viG~~~~D~~~~~~---------~~------~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~g~~i~ 67 (346)
T 3ktn_A 3 LKIAAFGEVMLRFTPPEY---------LM------LEQTEQLRMNFVGTGVNLLANLAHFQLETALITKLPANRLGEAGK 67 (346)
T ss_dssp CEEEEECCCEEEEECSTT---------CC------TTTCSCCEEEEECHHHHHHHHHHHTTCEEEEEEEECSSHHHHHHH
T ss_pred CcEEEeChhhhhhcCCCC---------Cc------ccccceeEEeccCHHHHHHHHHHHcCCCeEEEEecCCCHHHHHHH
Confidence 579999999999884221 11 11345567889999999999999999999999999999 78899
Q ss_pred HHHHHcCCccceeeecCCcccceEEEEEecCCCeeEEEe----CCccccCCccccC---CcCCceEEEECCCC-------
Q psy8856 79 KHLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIFH----PGAMQLSYDDNCI---NNADIKIAIISPDN------- 144 (312)
Q Consensus 79 ~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~---~~~~~~~~~~~~~~------- 144 (312)
+.|++.||+++++... +.+|+.+++..+.++++.++.+ .++...++++++. .+..++++++++..
T Consensus 68 ~~l~~~gv~~~~v~~~-~~~t~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~ 146 (346)
T 3ktn_A 68 AALRKLGISDQWVGEK-GDHIGSFFAEMGYGIRPTQVTYQNRHQSAFGISEAKDYDFEAFLAEVDMVHICGISLSLTEKT 146 (346)
T ss_dssp HHHHHTTCBCTTEEEC-CSCCEEEEEECCBTTBCCEEEECCCTTSTTTTCCGGGSCHHHHHTTCSEEEECTHHHHHCHHH
T ss_pred HHHHHcCCcceEEEeC-CCceEEEEEEecCCCCCceEEecCCCCChhhhCChhhcChHHHhCCCCEEEEeCccccCCHHH
Confidence 9999999999998774 5689999888776666444443 2334455665554 25789999998643
Q ss_pred hHHHHHHHHHHHhcCCcEEEcCCCCcccCCH-------HHHHHHhhcccEEEeCHHHHHHhhcCC-CC------CH----
Q psy8856 145 CCNMIKHIKKILKLKIPFIFDPGQSLSMFTK-------EELIKIIKKSSYIIVNEYESKLLVSKT-SL------SL---- 206 (312)
Q Consensus 145 ~~~~~~~~~~~~~~~~~v~~D~~~~~~~~~~-------~~l~~ll~~~dvl~~n~~E~~~l~~~~-~~------~~---- 206 (312)
.+.+.++++.+++.+.++++||+++...|.. +.+.++++++|++++|++|++.|++.. .. +.
T Consensus 147 ~~~~~~~~~~a~~~g~~v~~D~~~r~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~~ 226 (346)
T 3ktn_A 147 RDAALILAQKAHAYQKKVCFDFNYRPSLNTANSALFMRQQYERILPYCDIVFGSRRDLVELLGFIPREDLEGEAQETELI 226 (346)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCCCGGGCCHHHHHHHHHHHHHHGGGCSEEECCHHHHHHTSCCCCCTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEeCCCChHHcCCccHHHHHHHHHHHHHhCCEEEccHHHHHHHhCCCCCccccchHHHHHHH
Confidence 2567888899999999999999988888874 567889999999999999999999876 32 11
Q ss_pred HHHhh--cCCEEEEeeCCCc-------eEEEecCCceEEcCCcccCCcCCCCCchhhhHHHHHHHHHcCCCHHHHHHHHH
Q psy8856 207 QKINE--QVKVLIVTRGELG-------SDIFLNNERKIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSS 277 (312)
Q Consensus 207 ~~l~~--g~~~vvvt~G~~G-------~~~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~ 277 (312)
+.+.+ +++.++||+|++| ++++++ ++.+++|+++++ ++||+||||+|.|||++++++|+++++|+++|+
T Consensus 227 ~~l~~~~g~~~vvvT~G~~G~~~~~~g~~~~~~-~~~~~~~~~~v~-vvdttGAGDaF~ag~~~~l~~g~~l~~a~~~A~ 304 (346)
T 3ktn_A 227 QRFMSQYNLEWFAGTTRSHSQNQNYLSGYLYTQ-NEYQQSEKRPLL-NLDRIGAGDAYAAGILYGYSQNWSLEKAVTFAT 304 (346)
T ss_dssp HHHHHHHTCSEEEEEEEEECSSCEEEEEEEECS-SCEEECCCEECC-CSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHhcCCCEEEEecCccccccCcceEEEEEC-CceEEeCCCccc-cCCCCchhHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 22333 8999999999998 888887 889999999986 999999999999999999999999999999999
Q ss_pred HHhchheeeccCCCCCCChHHHHHHHHHhh
Q psy8856 278 LMGSTEISHQGGQKHCPSLSEIDQRFKEAF 307 (312)
Q Consensus 278 a~aa~~~~~~g~~~~~~~~~ev~~~~~~~~ 307 (312)
++|++++++.|+.. .|+.+|+++++++..
T Consensus 305 a~aa~~v~~~G~~~-~p~~~ev~~~l~~~~ 333 (346)
T 3ktn_A 305 VNGVLAHTIQGDIP-LTTVKQVNHVLEHPN 333 (346)
T ss_dssp HHHHHHTTSSSSCC-CCCHHHHHHHHHCTT
T ss_pred HHHHHHhccCCCCC-CCCHHHHHHHHhcCC
Confidence 99999999999987 899999999998654
No 17
>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A
Probab=100.00 E-value=1.3e-44 Score=319.48 Aligned_cols=283 Identities=16% Similarity=0.205 Sum_probs=232.4
Q ss_pred CcEeeecceeeeeEEecCCcccCCCCccccccceeeeecCCcccccCCchHHHHHHHHHhCCCceEEEEeecC--hHHHH
Q psy8856 1 MNSLICGSLAFDNIMRFEGKFSNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLLNGNPLIVSILGKD--GSSYL 78 (312)
Q Consensus 1 m~i~~~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~~~~~~~vG~d--~~~i~ 78 (312)
|+|+++|++++|.+...+ +. ..+.......+||++.|+|.+|++||.++.++|.+|+| |+.++
T Consensus 2 ~~i~viG~~~~D~~~~~~---------~~------~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~vG~D~~g~~i~ 66 (309)
T 1v1a_A 2 LEVVTAGEPLVALVPQEP---------GH------LRGKRLLEVYVGGAEVNVAVALARLGVKVGFVGRVGEDELGAMVE 66 (309)
T ss_dssp CSEEEESCCEEEEECSSS---------SC------GGGCCEEEEEEECHHHHHHHHHHHHTCCEEEEEEECSSHHHHHHH
T ss_pred CcEEEEccceEEEecCCC---------Cc------ccchheeeeecCcHHHHHHHHHHHcCCCeEEEEEeCCCHHHHHHH
Confidence 689999999999984322 11 11233456789999999999999999999999999999 78899
Q ss_pred HHHHHcCCccceeeecCCcccceEEEEEecCCCeeEEEeC--CccccCCccccCC--cCCceEEEECCCCh-------HH
Q psy8856 79 KHLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIFHP--GAMQLSYDDNCIN--NADIKIAIISPDNC-------CN 147 (312)
Q Consensus 79 ~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~~~-------~~ 147 (312)
+.|++.||+++++.+.++ +|+.+++..+.++++.+.+.. ++...++.+++.. +++++++++++... +.
T Consensus 67 ~~L~~~gv~~~~v~~~~~-~t~~~~~~~~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~ 145 (309)
T 1v1a_A 67 ERLRAEGVDLTHFRRAPG-FTGLYLREYLPLGQGRVFYYRKGSAGSALAPGAFDPDYLEGVRFLHLSGITPALSPEARAF 145 (309)
T ss_dssp HHHHHHTCBCTTEEECSS-CCCEEEEEECTTSCEEEEEECTTCSGGGCCTTSSCGGGGTTCSEEEEETTGGGSCHHHHHH
T ss_pred HHHHHcCCCCceEEEcCC-CCEEEEEEECCCCCceEEEeCCCChhhhCCHhhCChhHhcCCCEEEEeCchhccCchHHHH
Confidence 999999999999988777 999999988877776655443 3344455444432 56889999986532 45
Q ss_pred HHHHHHHHHhcCCcEEEcCCCCcccCCH----HHHHHHhhcccEEEeCHHHHHHhhcCCCCCHHHH--hhcCCEEEEeeC
Q psy8856 148 MIKHIKKILKLKIPFIFDPGQSLSMFTK----EELIKIIKKSSYIIVNEYESKLLVSKTSLSLQKI--NEQVKVLIVTRG 221 (312)
Q Consensus 148 ~~~~~~~~~~~~~~v~~D~~~~~~~~~~----~~l~~ll~~~dvl~~n~~E~~~l~~~~~~~~~~l--~~g~~~vvvt~G 221 (312)
+.++++.+++.+.++++||+.+...|.. +.+.++++++|++++|++|++.+++.. +++ ..+++.++||+|
T Consensus 146 ~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~----~~~~~~~g~~~vvvt~G 221 (309)
T 1v1a_A 146 SLWAMEEAKRRGVRVSLDVNYRQTLWSPEEARGFLERALPGVDLLFLSEEEAELLFGRV----EEALRALSAPEVVLKRG 221 (309)
T ss_dssp HHHHHHHHHTTTCEEEEECCCCTTTSCHHHHHHHHHHHGGGCSEEEEEHHHHHHHHSSH----HHHHHHTCCSEEEEECG
T ss_pred HHHHHHHHHHcCCEEEEeCCCCcccCCHHHHHHHHHHHHHhCCEEECcHHHHHHHhCCH----HHHHHhcCCCEEEEEec
Confidence 6778888888999999999987666752 456788999999999999999998754 222 448999999999
Q ss_pred CCceEEEecCCceEEcCCcccCCcCCCCCchhhhHHHHHHHHHcCCCHHHHHHHHHHHhchheeeccCCCCCCChHHHHH
Q psy8856 222 ELGSDIFLNNERKIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSSLMGSTEISHQGGQKHCPSLSEIDQ 301 (312)
Q Consensus 222 ~~G~~~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~a~aa~~~~~~g~~~~~~~~~ev~~ 301 (312)
++|+++ +++++.+++|+++++ ++||+||||+|.|||++++++|+++++|+++|+++|+.++++.|+..+.|+.+|+++
T Consensus 222 ~~G~~~-~~~~~~~~~~~~~v~-vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~a~~~aa~~v~~~G~~~~~~~~~~v~~ 299 (309)
T 1v1a_A 222 AKGAWA-FVDGRRVEGSAFAVE-AVDPVGAGDAFAAGYLAGAVWGLPVEERLRLANLLGASVAASRGDHEGAPYREDLEV 299 (309)
T ss_dssp GGCEEE-EETTEEEECCCCCCC-CSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSTTTTTCCCHHHHTT
T ss_pred CCCeeE-ecCCcEEEeCCCCCC-cCCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCCCCCcCCCCHHHHHH
Confidence 999988 542667899999986 999999999999999999999999999999999999999999999877799999988
Q ss_pred HHHH
Q psy8856 302 RFKE 305 (312)
Q Consensus 302 ~~~~ 305 (312)
++++
T Consensus 300 ~~~~ 303 (309)
T 1v1a_A 300 LLKA 303 (309)
T ss_dssp CC--
T ss_pred HHhh
Confidence 7654
No 18
>3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728}
Probab=100.00 E-value=5.7e-45 Score=320.95 Aligned_cols=282 Identities=25% Similarity=0.383 Sum_probs=234.0
Q ss_pred CcEeeecceeeeeEEecCCcccCCCCccccccceeeeecCCcccccCCchHHHHHHHHHhCCCceEEEEeecC-hHHHHH
Q psy8856 1 MNSLICGSLAFDNIMRFEGKFSNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLLNGNPLIVSILGKD-GSSYLK 79 (312)
Q Consensus 1 m~i~~~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~~~~~~~vG~d-~~~i~~ 79 (312)
++|+++|++++|.+..++ ++|. +...+.......+||++.|+|.+|++||.++.++|.+|+| |+.+++
T Consensus 21 ~~v~viG~~~iD~~~~~~-~~p~----------g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~G~~i~~ 89 (306)
T 3bf5_A 21 RFLAYFGHLNIDVLISVD-SIPR----------EGSVNVKDLRPRFGGTAGNFAIVAQKFRIPFDLYSAVGMKTHREYLA 89 (306)
T ss_dssp EEEEEECCCEEEEEEECS-CCCS----------SEEEECSEEEEEEEHHHHHHHHHHHHTTCCCEEEEEEETTTCHHHHH
T ss_pred CcEEEECCceEEEEEecC-CCCC----------CceEECcceEecCCChHHHHHHHHHHcCCCeEEEEEEeCChHHHHHH
Confidence 479999999999999988 6641 2233445567889999999999999999999999999999 889999
Q ss_pred HHHHcCCccceeeecCCcccceEEEEEecCCCeeEEEeCCccccCCccccCCcCCceEEEECCCChHHHHHHHHHHHhcC
Q psy8856 80 HLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIFHPGAMQLSYDDNCINNADIKIAIISPDNCCNMIKHIKKILKLK 159 (312)
Q Consensus 80 ~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (312)
.|++.||+++++.+.++.+|+.+++.+++ +++.+..+.++...+. +++. .+++++++++.. ...++++.+++
T Consensus 90 ~L~~~gV~~~~v~~~~~~~T~~~~~~~~~-g~r~~~~~~ga~~~~~-~~l~--~~~~~v~~~~~~--~~~~~~~~a~~-- 161 (306)
T 3bf5_A 90 MIESMGINTGHVEKFEDESGPICYIATDG-KKQVSFMHQGAMAAWA-PQLA--DEYEYVHFSTGP--NYLDMAKSIRS-- 161 (306)
T ss_dssp HHHHTTCCCTTEEEETTCCCSEEEEEECS-SCEEEEEECTHHHHCC-CCCC--SCEEEEEECSSS--SHHHHHHHCCS--
T ss_pred HHHHcCCCchheEecCCCCCceEEEEEcC-CeeEEEEeCChhhhhh-Hhhc--CCCCEEEECChH--HHHHHHHHhCC--
Confidence 99999999999877677789999999988 8777777776654455 4443 688999998766 55666666553
Q ss_pred CcEEEcCCCCcccCCHHHHHHHhhcccEEEeCHHHHHHhhcCCCCCHHHHhhcCCEEEEeeCCCceEEEecCCceEEcCC
Q psy8856 160 IPFIFDPGQSLSMFTKEELIKIIKKSSYIIVNEYESKLLVSKTSLSLQKINEQVKVLIVTRGELGSDIFLNNERKIKIPC 239 (312)
Q Consensus 160 ~~v~~D~~~~~~~~~~~~l~~ll~~~dvl~~n~~E~~~l~~~~~~~~~~l~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~ 239 (312)
++++||+.+...+..+.+.++++++|++++|++|++.+++....+..+ . .++||+|++|++++++ ++.+++|+
T Consensus 162 -~v~~D~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~----l-~vvvT~G~~Ga~~~~~-~~~~~~~~ 234 (306)
T 3bf5_A 162 -KIIFDPSQEIHKYSKDELKKFHEISYMSIFNDHEYRVFREMTGLSSPK----V-TTIVTNGERGSSLFMD-GKKYDFPA 234 (306)
T ss_dssp -EEEECCGGGGGGSCHHHHHHHHHHCSEEEEEHHHHHHHHHHHCCSSCS----S-CEEEEEGGGEEEEEET-TEEEEEEC
T ss_pred -cEEEcCchhhhhccHHHHHHHHhcCCEEEcCHHHHHHHhCCCCcCccc----E-EEEEeecccCeEEEeC-CcEEEecC
Confidence 899999865444556778899999999999999999998753322111 1 1999999999999988 88899999
Q ss_pred cccCCcCCCCCchhhhHHHHHHHHHcCCCHHHHHHHHHHHhchheee--ccCCCCCCChHHHHHHHHHhhccc
Q psy8856 240 VKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSSLMGSTEISH--QGGQKHCPSLSEIDQRFKEAFGYR 310 (312)
Q Consensus 240 ~~~~~~vdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~a~aa~~~~~--~g~~~~~~~~~ev~~~~~~~~~~~ 310 (312)
+++ + +||+||||+|.|||++++.+|+++++|+++|+++|+.++++ .|+....|+++|+++++++.++++
T Consensus 235 ~~v-~-vDttGAGDaF~ag~~~~l~~g~~~~~a~~~A~~~aa~~v~~~~~G~~~~~p~~~ev~~~~~~~~~~~ 305 (306)
T 3bf5_A 235 IPS-S-GDTVGAGDSFRAGLYLALYNRRSIEKGMIYGTIIAHHVIDDGIENFSLNMEDLERETENYRRMFTKR 305 (306)
T ss_dssp CCC-C-SCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHCSTTCCCCHHHHHHHHHHHHHHC---
T ss_pred CcC-C-CCCCCccHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCCccccccCCCHHHHHHHHHhhcccC
Confidence 988 4 99999999999999999999999999999999999999999 999766789999999999887764
No 19
>2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A*
Probab=100.00 E-value=3.1e-44 Score=317.51 Aligned_cols=285 Identities=18% Similarity=0.198 Sum_probs=231.0
Q ss_pred CcEeeecceeeeeEEecCCcccCCCCccccccceeeeecCCcccccCCchHHHHHHHHHhCCCceEEEEeecC--hHHHH
Q psy8856 1 MNSLICGSLAFDNIMRFEGKFSNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLLNGNPLIVSILGKD--GSSYL 78 (312)
Q Consensus 1 m~i~~~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~~~~~~~vG~d--~~~i~ 78 (312)
|+|+++|++++|.+...+ ++ ..+.......+||++.|+|.+|++||.++.++|.+|+| |+.++
T Consensus 2 ~~v~viG~~~~D~~~~~~---------~~------~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~i~~vG~D~~g~~~~ 66 (313)
T 2v78_A 2 VDVIALGEPLIQFNSFNP---------GP------LRFVNYFEKHVAGSELNFCIAVVRNHLSCSLIARVGNDEFGKNII 66 (313)
T ss_dssp CCEEEECCCEEEEEESSS---------SC------GGGCCEEEEEEECHHHHHHHHHHHTTCCEEEEEEEESSHHHHHHH
T ss_pred CeEEEECcceEEEecCCC---------Cc------ccccceeEecCCChHHHHHHHHHHCCCcEEEEEEeCCCHHHHHHH
Confidence 699999999999985322 11 11234457789999999999999999999999999999 78899
Q ss_pred HHHHHcCCccceeeecCCcccceEEEE--EecCCCeeEEEeC--CccccCCccccCC--cCCceEEEECCCC-------h
Q psy8856 79 KHLKYLGISNKYIQKINSMFTAQCFIV--TDVNNNQITIFHP--GAMQLSYDDNCIN--NADIKIAIISPDN-------C 145 (312)
Q Consensus 79 ~~l~~~gi~~~~~~~~~~~~t~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~~-------~ 145 (312)
+.|++.||+++++.+.++.+|+.+++. +++++++.+.+.. ++...++++++.. +++++++++++.. .
T Consensus 67 ~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~~~g~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~ 146 (313)
T 2v78_A 67 EYSRAQGIDTSHIKVDNESFTGIYFIQRGYPIPMKSELVYYRKGSAGSRLSPEDINENYVRNSRLVHSTGITLAISDNAK 146 (313)
T ss_dssp HHHHHTTCBCTTEEEETTSCCCEEEEEESSSSTTCEEEEEECTTCSGGGCCGGGCCHHHHHTSSEEEEEHHHHHHCHHHH
T ss_pred HHHHHcCCcCceEEEcCCCCceEEEEEEecCCCCCeeEEEeCCcChhHhCChhhCCHHHhcCCCEEEEcCchhhcChHHH
Confidence 999999999999888777799999998 7777776655443 3444555555532 4678899987543 2
Q ss_pred HHHHHHHHHHHhcCCcEEEcCCCCcccCC-----HHHHHHHhhccc--EEEeCHHHHHHhhcCCCCC--HHHHhh-cCCE
Q psy8856 146 CNMIKHIKKILKLKIPFIFDPGQSLSMFT-----KEELIKIIKKSS--YIIVNEYESKLLVSKTSLS--LQKINE-QVKV 215 (312)
Q Consensus 146 ~~~~~~~~~~~~~~~~v~~D~~~~~~~~~-----~~~l~~ll~~~d--vl~~n~~E~~~l~~~~~~~--~~~l~~-g~~~ 215 (312)
+.+.++++.+++. ++||+.+...|. .+.+.++++++| ++++|++|++.+++..+.. .+.+.+ +++.
T Consensus 147 ~~~~~~~~~a~~~----~~D~~~~~~~~~~~~~~~~~~~~~l~~~d~~il~~N~~E~~~l~g~~~~~~~~~~l~~~g~~~ 222 (313)
T 2v78_A 147 EAVIKAFELAKSR----SLDTNIRPKLWSSLEKAKETILSILKKYDIEVLITDPDDTKILLDVTDPDEAYRKYKELGVKV 222 (313)
T ss_dssp HHHHHHHHHCSSE----EEECCCCGGGSSCHHHHHHHHHHHHHHSCEEEEEECHHHHHHHHSCCCHHHHHHHHHHTTEEE
T ss_pred HHHHHHHHHHHHh----CcCCcCChhhcCCHHHHHHHHHHHHHhcCeeEEECcHHHHHHHhCCCCHHHHHHHHHhCCCCE
Confidence 4445555554433 899998776675 245678999999 9999999999999864321 123333 7899
Q ss_pred EEEeeCCCceEEEecCCceEEcCCcccCCcCCCCCchhhhHHHHHHHHHcCCCHHHHHHHHHHHhchheeeccCCCCCCC
Q psy8856 216 LIVTRGELGSDIFLNNERKIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSSLMGSTEISHQGGQKHCPS 295 (312)
Q Consensus 216 vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~a~aa~~~~~~g~~~~~~~ 295 (312)
++||+|++|++++++ ++.+++|+++++ ++||+||||+|.|||++++.+|+++++|+++|+++|+.++++.|+..+.|+
T Consensus 223 vvvt~G~~G~~~~~~-~~~~~~~~~~v~-vvDttGAGDaF~ag~~~~l~~g~~~~~a~~~a~~~aa~~v~~~G~~~~~~~ 300 (313)
T 2v78_A 223 LLYKLGSKGAIAYKD-NVKAFKDAYKVP-VEDPTGAGDAMAGTFVSLYLQGKDIEYSLAHGIAASTLVITVRGDNELTPT 300 (313)
T ss_dssp EEEECGGGCEEEEET-TEEEEECCCCCC-CSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSSSTTCCC
T ss_pred EEEEECCCCcEEeeC-CcEEEeCCCcCC-ccCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCCCCCCCCC
Confidence 999999999999987 888999999986 999999999999999999999999999999999999999999999877799
Q ss_pred hHHHHHHHHHh
Q psy8856 296 LSEIDQRFKEA 306 (312)
Q Consensus 296 ~~ev~~~~~~~ 306 (312)
++|+++++++.
T Consensus 301 ~~~v~~~~~~~ 311 (313)
T 2v78_A 301 LEDAERFLNEF 311 (313)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhc
Confidence 99999998763
No 20
>2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1
Probab=100.00 E-value=1.7e-44 Score=321.49 Aligned_cols=285 Identities=19% Similarity=0.272 Sum_probs=238.4
Q ss_pred CcEeeecceeeeeEEecCCcccCCCCccccccceeeeecCCcccccCCchHHHHHHHHHhCCCceEEEEeecC--hHHHH
Q psy8856 1 MNSLICGSLAFDNIMRFEGKFSNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLLNGNPLIVSILGKD--GSSYL 78 (312)
Q Consensus 1 m~i~~~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~~~~~~~vG~d--~~~i~ 78 (312)
|+|+++|++++|++..++ ++|. +++ +.+.......+||++.|+|.+|++||.++.++|.+|+| |+.++
T Consensus 25 ~~vlviG~~~iD~~~~~~-~~p~---~g~------~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~l~ 94 (331)
T 2fv7_A 25 AAVVVVGSCMTDLVSLTS-RLPK---TGE------TIHGHKFFIGFGGKGANQCVQAARLGAMTSMVCKVGKDSFGNDYI 94 (331)
T ss_dssp CSEEEECCCEEEEEEECS-SCCC---TTC------CCCCSEEEEEEECHHHHHHHHHHHTTCCEEEEEEEESSHHHHHHH
T ss_pred CCEEEECcccEEEEEecC-CCCC---CCc------eEecCceEECcCCHHHHHHHHHHHCCCCeEEEEEECCChhHHHHH
Confidence 689999999999999988 7764 222 22334557789999999999999999999999999999 78899
Q ss_pred HHHHHcCCccceeeecCCcccceEEEEEecCCCeeEEEeCCccccCCccccCC----cCCceEEEECCCC-hHHHHHHHH
Q psy8856 79 KHLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIFHPGAMQLSYDDNCIN----NADIKIAIISPDN-CCNMIKHIK 153 (312)
Q Consensus 79 ~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~ 153 (312)
+.|++.||+++++.+.++.+|+.+++.+++++++.+...+++...++++++.. +..+++++++... .+.+..+++
T Consensus 95 ~~L~~~Gv~~~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~ga~~~l~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~~~~ 174 (331)
T 2fv7_A 95 ENLKQNDISTEFTYQTKDAATGTASIIVNNEGQNIIVIVAGANLLLNTEDLRAAANVISRAKVMVCQLEITPATSLEALT 174 (331)
T ss_dssp HHHHTTTEECTTEEEESSSCCEEEEEEECTTSCEEEEEECGGGGGCCHHHHHHTHHHHHHCSEEEECSSSCHHHHHHHHH
T ss_pred HHHHHcCCcceeeEecCCCCCceEEEEECCCCCeEEEecCCccccCCHHHHHHHHHhhccCCEEEEecCCCHHHHHHHHH
Confidence 99999999999988877789999999999888888777777655566555432 3567889887654 467778888
Q ss_pred HHHhcCCcEEEcCCCCcccCCHHHHHHHhhcccEEEeCHHHHHHhhcCCCCCH-------HHHhh-cCCEEEEeeCCCce
Q psy8856 154 KILKLKIPFIFDPGQSLSMFTKEELIKIIKKSSYIIVNEYESKLLVSKTSLSL-------QKINE-QVKVLIVTRGELGS 225 (312)
Q Consensus 154 ~~~~~~~~v~~D~~~~~~~~~~~~l~~ll~~~dvl~~n~~E~~~l~~~~~~~~-------~~l~~-g~~~vvvt~G~~G~ 225 (312)
.+++.+.++++||+.....+. .++++++|++++|++|++.|++....+. +.+.+ +++.++||+|++|+
T Consensus 175 ~a~~~g~~v~~Dp~~~~~~~~----~~ll~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~~~l~~~g~~~VvvT~G~~G~ 250 (331)
T 2fv7_A 175 MARRSGVKTLFNPAPAIADLD----PQFYTLSDVFCCNESEAEILTGLTVGSAADAGEAALVLLKRGCQVVIITLGAEGC 250 (331)
T ss_dssp HHHHTTCEEEECCCSCCTTCC----THHHHTCSEEEEEHHHHHHHHSSCCCSHHHHHHHHHHHHTTTCSEEEEECGGGCE
T ss_pred HHHHcCCEEEEeCCcccccch----HHHHhcCCEEEeCHHHHHHHhCCCCCChhHHHHHHHHHHHcCCCEEEEEECCCce
Confidence 889899999999997632222 4688999999999999999998653322 22322 89999999999999
Q ss_pred EEEecCC--ceEEcCCcccCCcCCCCCchhhhHHHHHHHHHcC--CCHHHHHHHHHHHhchheeeccCCCCCCChHHHHH
Q psy8856 226 DIFLNNE--RKIKIPCVKADRIVDPTGCGDAFRSGVLFGIINN--LDWYTTGRLSSLMGSTEISHQGGQKHCPSLSEIDQ 301 (312)
Q Consensus 226 ~~~~~~~--~~~~~~~~~~~~~vdt~GaGDaf~ag~~~~l~~g--~~~~~a~~~a~a~aa~~~~~~g~~~~~~~~~ev~~ 301 (312)
+++++ + +.+++|+++++ ++||+||||+|.|+|++++++| +++++|+++|+++|+.++++.|+....|+++|+++
T Consensus 251 ~~~~~-~~~~~~~~~~~~v~-vvdttGAGDaf~a~~~~~l~~g~~~~~~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev~~ 328 (331)
T 2fv7_A 251 VVLSQ-TEPEPKHIPTEKVK-AVDTTGAGDSFVGALAFYLAYYPNLSLEDMLNRSNFIAAVSVQAAGTQSSYPYKKDLPL 328 (331)
T ss_dssp EEEES-SCCSCEEECCCCCC-CSCCTTHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHTSSSGGGGCCCGGGSCG
T ss_pred EEEEC-CCCceeEecCCCCc-cCCCCCchHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhCCCCCccCCCCHHHHhh
Confidence 99887 6 78899999886 9999999999999999999999 99999999999999999999998766889988754
No 21
>4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A*
Probab=100.00 E-value=1.6e-44 Score=323.94 Aligned_cols=299 Identities=19% Similarity=0.248 Sum_probs=241.6
Q ss_pred cEeeecceeeeeEEecCCcccCC--CCccccccceee------eecCCcccccCCchHHHHHHHHHhCCCceEEEEeecC
Q psy8856 2 NSLICGSLAFDNIMRFEGKFSNS--LLPDQLDKINVS------FYSPTMKKEYGGCAGNIAYNLKLLNGNPLIVSILGKD 73 (312)
Q Consensus 2 ~i~~~G~~~~D~~~~~~~~~~~~--~~~~~~~~~~~~------~~~~~~~~~~GG~~~n~a~~l~~lG~~~~~~~~vG~d 73 (312)
+|+++|++++|++..+++.|+.. +.++....++.. .........+||++.|+|.+|++||.++.++|.+|+|
T Consensus 27 ~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~li~~~~~~~l~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~ig~vG~D 106 (352)
T 4e3a_A 27 DVLTVGNAIVDIISRCNDQFLIDNQITKAAMNLIDAERAELLYSRMGPALEASGGSAGNTAAGVANLGGKAAYFGNVAAD 106 (352)
T ss_dssp EEEEECCCEEEEEEECCHHHHHHTTCCTTSEEECCHHHHHHHHHHSCSCEEEECCHHHHHHHHHHHHTCCEEEECCCCSS
T ss_pred cEEEECCceeeEEEecCHHHHHHcCCCCCcceEeCHHHHHHHHHHhhhccEecCCHHHHHHHHHHHcCCCeEEEEEECCC
Confidence 59999999999999998433210 011111111000 0012335789999999999999999999999999999
Q ss_pred --hHHHHHHHHHcCCccceeeecCCcccceEEEEEecCCCeeEEEeCCccccCCccccCC--cCCceEEEECCC------
Q psy8856 74 --GSSYLKHLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIFHPGAMQLSYDDNCIN--NADIKIAIISPD------ 143 (312)
Q Consensus 74 --~~~i~~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~------ 143 (312)
|+.+++.|++.||+++++.+.++.+|+.+++++++++++.+..+.+....++++++.. +.+++++++++.
T Consensus 107 ~~G~~l~~~l~~~GV~~~~~~~~~~~~T~~~~v~v~~~g~r~~~~~~ga~~~l~~~~~~~~~~~~~~~v~~~G~~~~~~~ 186 (352)
T 4e3a_A 107 QLGDIFTHDIRAQGVHYQTKPKGAFPPTARSMIFVTEDGERSMNTYLGACVELGPEDVEADVVADAKVTYFEGYLWDPPR 186 (352)
T ss_dssp HHHHHHHHHHHHTTCEECCCCCCSSSCCEEEEEEECTTSCEEEEEECGGGGGCCGGGCCHHHHHTEEEEEEEGGGGSSSS
T ss_pred hHHHHHHHHHHHcCCccceeeccCCCCCeEEEEEEcCCCceEEEeccChhhcCChhhCCHHHHhhCCEEEEeeeecCCch
Confidence 7889999999999999988777779999999999989998888877776677766653 568899998743
Q ss_pred ChHHHHHHHHHHHhcCCcEEEcCCCCccc-CCHHHHHHHhh--cccEEEeCHHHHHHhhcCCCCC--HHHHhhcCCEEEE
Q psy8856 144 NCCNMIKHIKKILKLKIPFIFDPGQSLSM-FTKEELIKIIK--KSSYIIVNEYESKLLVSKTSLS--LQKINEQVKVLIV 218 (312)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~v~~D~~~~~~~-~~~~~l~~ll~--~~dvl~~n~~E~~~l~~~~~~~--~~~l~~g~~~vvv 218 (312)
..+.+.++++.+++.+.++++|+++.... ...+.+.++++ ++|++++|++|++.+++..+.. .+.+.++++.++|
T Consensus 187 ~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~l~~ll~~~~~dil~~N~~Ea~~l~g~~~~~~a~~~l~~~~~~vvv 266 (352)
T 4e3a_A 187 AKEAILDCARIAHQHGREMSMTLSDSFCVDRYRGEFLDLMRSGKVDIVFANRQEALSLYQTDDFEEALNRIAADCKIAAV 266 (352)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHTTSCCEEEEEHHHHHHHTTCSCHHHHHHHHHHHSSEEEE
T ss_pred HHHHHHHHHHHHHHcCCEEEEECCchhhHHHHHHHHHHHhcccCCcEEEeCHHHHHHHhCCCCHHHHHHHHhcCCCEEEE
Confidence 34677888999999999999999753211 11355778998 9999999999999999865332 2345668999999
Q ss_pred eeCCCceEEEecCCceEEcCCcccCCcCCCCCchhhhHHHHHHHHHcCCCHHHHHHHHHHHhchheeeccCCCCCCChHH
Q psy8856 219 TRGELGSDIFLNNERKIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSSLMGSTEISHQGGQKHCPSLSE 298 (312)
Q Consensus 219 t~G~~G~~~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~a~aa~~~~~~g~~~~~~~~~e 298 (312)
|+|++|++++++ ++.+++|++++++++||+||||+|.|||++++.+|+++++|+++|+++|+.+|++.|+.+..+.+++
T Consensus 267 T~G~~G~~~~~~-~~~~~~~~~~v~~vvDttGAGDaF~agfl~~l~~g~~l~~a~~~A~~aAa~~v~~~G~~~~~~~~~~ 345 (352)
T 4e3a_A 267 TMSENGAVILKG-RERYYVNAIRIREVVDTTGAGDLFASGFLYGYTQGRSLEDCGKLGCLAAGIVIQQIGPRPMTSLSEA 345 (352)
T ss_dssp ECGGGCEEEEET-TEEEEECCCCCSCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTSSSSSCSSCHHHH
T ss_pred EECCCceEEEEC-CEEEEECCccCCCCcCCCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCCCCCCCcCHHHH
Confidence 999999999998 9999999999865899999999999999999999999999999999999999999999986666666
Q ss_pred HHH
Q psy8856 299 IDQ 301 (312)
Q Consensus 299 v~~ 301 (312)
+++
T Consensus 346 ~~~ 348 (352)
T 4e3a_A 346 AKQ 348 (352)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 22
>3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A*
Probab=100.00 E-value=4e-44 Score=316.81 Aligned_cols=281 Identities=21% Similarity=0.245 Sum_probs=233.7
Q ss_pred CcEeeecceeeeeEEecCCcccCCCCccccccceeeeecCCcccccCCchHHHHHHHHHhCCCceEEEEeecC--hHHHH
Q psy8856 1 MNSLICGSLAFDNIMRFEGKFSNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLLNGNPLIVSILGKD--GSSYL 78 (312)
Q Consensus 1 m~i~~~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~~~~~~~vG~d--~~~i~ 78 (312)
|+|+++|++++|.+...++.. .+.......+||++.|+|.+|++||.++.++|.+|+| |+.++
T Consensus 2 ~~v~viG~~~iD~~~~~~g~~---------------~~~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~g~~i~ 66 (313)
T 3ewm_A 2 SLIASIGELLIDLISVEEGDL---------------KDVRLFEKHPGGAPANVAVGVSRLGVKSSLISKVGNDPFGEYLI 66 (313)
T ss_dssp CEEEEESCCEEEEEESSSSCT---------------TTCCEEEEEEECHHHHHHHHHHHTTCEEEEEEEEESSHHHHHHH
T ss_pred CcEEEECceeeeeecCCCCCc---------------ccccceeecCCCHHHHHHHHHHHCCCCeEEEEEeCCCHHHHHHH
Confidence 689999999999986554221 1234557889999999999999999999999999999 78899
Q ss_pred HHHHHcCCccceeeecCCcccceEEEEEecCCCeeEEEeCCc-cccCCccccCC--cCCceEEEECCCC------hHHHH
Q psy8856 79 KHLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIFHPGA-MQLSYDDNCIN--NADIKIAIISPDN------CCNMI 149 (312)
Q Consensus 79 ~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~------~~~~~ 149 (312)
+.|++.||+++++.+.++.+|+.+++.++. +++.+..+++. ...++++++.. ++.++++++++.. .+.+.
T Consensus 67 ~~l~~~gv~~~~v~~~~~~~T~~~~~~~~~-g~~~~~~~~~~a~~~l~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~~ 145 (313)
T 3ewm_A 67 EELSKENVDTRGIVKDEKKHTGIVFVQLKG-ASPSFLLYDDVAYFNMTLNDINWDIVEEAKIVNFGSVILARNPSRETVM 145 (313)
T ss_dssp HHHHHTTCBCTTEEEESSSCCEEEEEECSS-SSCEEEECCSSGGGCCCGGGCCHHHHHHCSEEEEESGGGGSTTHHHHHH
T ss_pred HHHHHcCCCccceeecCCCCceEEEEEecC-CCcceEeeccCHHHhCChhhCCHHHhCCCCEEEEcCcccCCcchHHHHH
Confidence 999999999999987788899999988776 77666666553 34556555542 4567888887642 35677
Q ss_pred HHHHHHHhcCCcEEEcCCCCcccCC------HHHHHHHhhcccEEEeCHHHHHHhhcCCCCCHHHHhhcCCEEEEeeCCC
Q psy8856 150 KHIKKILKLKIPFIFDPGQSLSMFT------KEELIKIIKKSSYIIVNEYESKLLVSKTSLSLQKINEQVKVLIVTRGEL 223 (312)
Q Consensus 150 ~~~~~~~~~~~~v~~D~~~~~~~~~------~~~l~~ll~~~dvl~~n~~E~~~l~~~~~~~~~~l~~g~~~vvvt~G~~ 223 (312)
++++.++ .+.++++||+.+...|. .+.++++++++|++++|++|++.+.+.... ..+.+.++||+|++
T Consensus 146 ~~~~~a~-~~~~v~~Dp~~~~~~~~~~~~~~~~~~~~~l~~~di~~~N~~E~~~l~~~~~~-----~~~~~~vviT~G~~ 219 (313)
T 3ewm_A 146 KVIKKIK-GSSLIAFDVNLRLDLWRGQEEEMIKVLEESIKLADIVKASEEEVLYLENQGVE-----VKGSMLTAITLGPK 219 (313)
T ss_dssp HHHHHHB-TTBEEEEECCCCGGGGTTCHHHHHHHHHHHHHHCSEEEEEHHHHHHHHTTTCC-----CCCSSEEEEECGGG
T ss_pred HHHHHhc-cCCEEEEeCCCChHHcCCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhccCcc-----ccCceEEEEEECCC
Confidence 8888877 47899999998777775 345778899999999999999999875311 12456689999999
Q ss_pred ceEEEecCCceEEcCCcccCCcCCCCCchhhhHHHHHHHHH--cCCCHHHHHHHHHHHhchheeeccCCCCCCChHHHHH
Q psy8856 224 GSDIFLNNERKIKIPCVKADRIVDPTGCGDAFRSGVLFGII--NNLDWYTTGRLSSLMGSTEISHQGGQKHCPSLSEIDQ 301 (312)
Q Consensus 224 G~~~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~ag~~~~l~--~g~~~~~a~~~a~a~aa~~~~~~g~~~~~~~~~ev~~ 301 (312)
|++++++ ++.+++|+++++ ++||+||||+|.|||++++. +|+++++|+++|+++|+++|++.|+.. .|+++|+++
T Consensus 220 G~~~~~~-~~~~~~~~~~v~-vvDttGAGDaf~a~~~~~l~~~~g~~l~~a~~~A~~~aa~~v~~~G~~~-~p~~~ev~~ 296 (313)
T 3ewm_A 220 GCRLIKN-ETVVDVPSYNVN-PLDTTGAGDAFMAALLVGILKLKGLDLLKLGKFANLVAALSTQKRGAWS-TPRKDELLK 296 (313)
T ss_dssp EEEEEET-TEEEEEECCCCC-CSCCTTHHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHHHTTSCSSCC-CCCHHHHTT
T ss_pred CeEEEEC-CeeEEcCCCCcc-cCCCCCchHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHccCCCCC-CCCHHHHHH
Confidence 9999998 888999999986 99999999999999999998 999999999999999999999999975 899999999
Q ss_pred HHHHh
Q psy8856 302 RFKEA 306 (312)
Q Consensus 302 ~~~~~ 306 (312)
++++.
T Consensus 297 ~l~~~ 301 (313)
T 3ewm_A 297 YKEAR 301 (313)
T ss_dssp SHHHH
T ss_pred HHHHH
Confidence 88764
No 23
>1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A*
Probab=100.00 E-value=5.1e-44 Score=319.36 Aligned_cols=283 Identities=16% Similarity=0.188 Sum_probs=229.0
Q ss_pred cEeeecceeeeeEEecCCcccCCCCccccccceeeeecCCcccccCCchHHHHHHHHHhCCCceEEEEeecC--hHHHHH
Q psy8856 2 NSLICGSLAFDNIMRFEGKFSNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLLNGNPLIVSILGKD--GSSYLK 79 (312)
Q Consensus 2 ~i~~~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~~~~~~~vG~d--~~~i~~ 79 (312)
+|+++|++++|.+.... ......+||++.|+|.+|++||.++.++|.+|+| |+.+++
T Consensus 26 ~ilviG~~~~D~~~~~~---------------------~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~G~~i~~ 84 (339)
T 1tyy_A 26 KVWVIGDASVDLVPEKQ---------------------NSYLKCPGGASANVGVCVARLGGECGFIGCLGDDDAGRFLRQ 84 (339)
T ss_dssp CEEEESCCEEEEEECSS---------------------SEEEEEEECHHHHHHHHHHHTTCCEEEEEEECSSHHHHHHHH
T ss_pred CEEEECcceeEEeccCC---------------------CceEEcCCCHHHHHHHHHHHcCCCeEEEEeeCCCHHHHHHHH
Confidence 69999999999986532 1225678999999999999999999999999999 788999
Q ss_pred HHHHcCCccceeeecCCcccceEEEEEecCCCeeEEEeC--CccccCCccccCCcCCceEEEECCC------ChHHHHHH
Q psy8856 80 HLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIFHP--GAMQLSYDDNCINNADIKIAIISPD------NCCNMIKH 151 (312)
Q Consensus 80 ~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 151 (312)
.|++.||+++++.+.++.+|+.+++.+++++++.+.++. ++...+.++....+..++++++++. ..+.+.++
T Consensus 85 ~L~~~gVd~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~a~~~l~~~~~~~l~~~~~v~~~~~~l~~~~~~~~~~~~ 164 (339)
T 1tyy_A 85 VFQDNGVDVTFLRLDADLTSAVLIVNLTADGERSFTYLVHPGADTYVSPQDLPPFRQYEWFYFSSIGLTDRPAREACLEG 164 (339)
T ss_dssp HHHTTTEECTTEEECTTSCCCEEEEC-------CEEECCSSCGGGGCCGGGCCCCCTTCEEEEEHHHHSSHHHHHHHHHH
T ss_pred HHHHcCCCchheEecCCCCCeEEEEEEcCCCCeEEEEecCCChhhhCCcchhhHhccCCEEEEcchhhcCcccHHHHHHH
Confidence 999999999999887778999999888877776665543 3444444444445678899988642 23567788
Q ss_pred HHHHHhcCCcEEEcCCCCcccCC-----HHHHHHHhhcccEEEeCHHHHHHhhcCCCCC--HHHHh-hcCCEEEEeeCCC
Q psy8856 152 IKKILKLKIPFIFDPGQSLSMFT-----KEELIKIIKKSSYIIVNEYESKLLVSKTSLS--LQKIN-EQVKVLIVTRGEL 223 (312)
Q Consensus 152 ~~~~~~~~~~v~~D~~~~~~~~~-----~~~l~~ll~~~dvl~~n~~E~~~l~~~~~~~--~~~l~-~g~~~vvvt~G~~ 223 (312)
++.+++.+.++++||+.+...|. .+.+.++++++|++++|++|++.+++..+.. .+.+. .+++.++||+|++
T Consensus 165 ~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~Ea~~l~g~~~~~~~~~~l~~~g~~~VvvT~G~~ 244 (339)
T 1tyy_A 165 ARRMREAGGYVLFDVNLRSKMWGNTDEIPELIARSAALASICKVSADELCQLSGASHWQDARYYLRDLGCDTTIISLGAD 244 (339)
T ss_dssp HHHHHHTTCEEEEECCCCGGGCSCGGGHHHHHHHHHHHCSEEEEEHHHHHHHHCCSSGGGGSSTTGGGTCSCEEEECGGG
T ss_pred HHHHHHcCCEEEEeCCCCccccCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhCCCCHHHHHHHHHHcCCCEEEEEECCC
Confidence 88889899999999998766664 3457788999999999999999999865331 12233 3899999999999
Q ss_pred ceEEEecCCceEEcCCcccCCcCCCCCchhhhHHHHHHHHHcC-----CCHHHHHHHHHHHhchheeeccCCCCCCChHH
Q psy8856 224 GSDIFLNNERKIKIPCVKADRIVDPTGCGDAFRSGVLFGIINN-----LDWYTTGRLSSLMGSTEISHQGGQKHCPSLSE 298 (312)
Q Consensus 224 G~~~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~ag~~~~l~~g-----~~~~~a~~~a~a~aa~~~~~~g~~~~~~~~~e 298 (312)
|++++++ ++.+++|+++++ ++||+||||+|.|||++++++| .++++|+++|+++|+.++++.|+..+.|+.+|
T Consensus 245 G~~~~~~-~~~~~~~~~~v~-vvDttGAGDaF~ag~~~~l~~g~~~~~~~l~~a~~~A~a~aa~~v~~~G~~~~~p~~~e 322 (339)
T 1tyy_A 245 GALLITA-EGEFHFPAPRVD-VVDTTGAGDAFVGGLLFTLSRANCWDHALLAEAISNANACGAMAVTAKGAMTALPFPDQ 322 (339)
T ss_dssp CEEEESS-SCEEEECCCCCC-CSCCTTHHHHHHHHHHHHHTTSSSCCHHHHHHHHHHHHHHHHHGGGSSSTTTTCCCHHH
T ss_pred ceEEEeC-CceEEcCCCCCC-cCCCCCchHHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHHhCCCCCCCCCCCHHH
Confidence 9999988 888999999986 9999999999999999999997 89999999999999999999999866899999
Q ss_pred HHHHHHHhh
Q psy8856 299 IDQRFKEAF 307 (312)
Q Consensus 299 v~~~~~~~~ 307 (312)
+++++++..
T Consensus 323 v~~~l~~~~ 331 (339)
T 1tyy_A 323 LNTFLSSHS 331 (339)
T ss_dssp HHHHHC---
T ss_pred HHHHHhcCc
Confidence 999887543
No 24
>2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125}
Probab=100.00 E-value=5.5e-43 Score=312.00 Aligned_cols=292 Identities=15% Similarity=0.152 Sum_probs=231.7
Q ss_pred CcEeeecceeeeeEEecCCcccCCCCccccccceeeeecCCcccccCCchHHHHHHHHHhCCCceEEEEeecC--hHHHH
Q psy8856 1 MNSLICGSLAFDNIMRFEGKFSNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLLNGNPLIVSILGKD--GSSYL 78 (312)
Q Consensus 1 m~i~~~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~~~~~~~vG~d--~~~i~ 78 (312)
|+|+++|+.++|.+...+ ..|. . ........+||++.|+|.+|++||.++.++|.+|+| |+.++
T Consensus 12 ~~i~viG~~~~D~~~~~~-~~~~-----~--------~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~l~ 77 (332)
T 2qcv_A 12 FDLIAIGRACIDLNAVEY-NRPM-----E--------ETMTFSKYVGGSPANIVIGSSKLGLKAGFIGKIADDQHGRFIE 77 (332)
T ss_dssp EEEEEESCCEEEEEESSC-SSCG-----G--------GCCCEEEEEESHHHHHHHHHHHTTCCEEEEEEECSSHHHHHHH
T ss_pred CcEEEECcceEEEecCCC-CCCc-----c--------ccceeEecCCCHHHHHHHHHHHcCCceEEEEEeCCCHHHHHHH
Confidence 479999999999997665 3321 1 123457789999999999999999999999999999 78899
Q ss_pred HHHHHcCCccceeeecCC-cccceEEEEEecCCCeeEEEeCC--ccccCCccccCC--cCCceEEEECCCC------hHH
Q psy8856 79 KHLKYLGISNKYIQKINS-MFTAQCFIVTDVNNNQITIFHPG--AMQLSYDDNCIN--NADIKIAIISPDN------CCN 147 (312)
Q Consensus 79 ~~l~~~gi~~~~~~~~~~-~~t~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~------~~~ 147 (312)
+.|+++||+++++.+.++ .+|+.+++.++.++++.+.++.. +...++++++.. +++++++++++.. .+.
T Consensus 78 ~~L~~~gV~~~~v~~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ 157 (332)
T 2qcv_A 78 SYMRGVGVDTSNLVVDQEGHKTGLAFTEIKSPEECSILMYRQDVADLYLSPEEVNEAYIRRSKLLLVSGTALSKSPSREA 157 (332)
T ss_dssp HHHHHTTCBCTTEEECSSCCCCCEEEEEEEETTEEEEEEECTTCGGGGCCGGGCCHHHHTTEEEEEEEGGGGSSTTHHHH
T ss_pred HHHHHcCCCCcceEecCCCCCceEEEEEEcCCCCccEEEECCcchhhhCCHhHCCHHHHccCCEEEEeCccccCchhHHH
Confidence 999999999999877653 58999888877666555544432 334455555542 4688999886532 266
Q ss_pred HHHHHHHHHhcCCcEEEcCCCCcccCCH-----HHHHHHhhcccEEEeCHHHHHHhhcCCC-CCH----HHHhh-cCCEE
Q psy8856 148 MIKHIKKILKLKIPFIFDPGQSLSMFTK-----EELIKIIKKSSYIIVNEYESKLLVSKTS-LSL----QKINE-QVKVL 216 (312)
Q Consensus 148 ~~~~~~~~~~~~~~v~~D~~~~~~~~~~-----~~l~~ll~~~dvl~~n~~E~~~l~~~~~-~~~----~~l~~-g~~~v 216 (312)
+.++++.+++.+.++++||+.+...|.. +.+.++++++|++++|++|++.+++... .+. +.+.+ +++.+
T Consensus 158 ~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~l~~~g~~~v 237 (332)
T 2qcv_A 158 VLKAIRLAKRNDVKVVFELDYRPYSWETPEETAVYYSLVAEQSDIVIGTREEFDVLENRTEKGDNDETIRYLFKHSPELI 237 (332)
T ss_dssp HHHHHHHHHHTTCEEEEECCCCGGGSSCHHHHHHHHHHHHHHCSEEEEEHHHHHHHTTCSSCCCHHHHHHHHTTSSCSEE
T ss_pred HHHHHHHHHHCCCEEEEcCcCchhhcCCHHHHHHHHHHHHHhCCEEEccHHHHHHHhCCCcCCCHHHHHHHHHHcCCCEE
Confidence 7788888998999999999987666632 3456789999999999999999988642 122 23333 89999
Q ss_pred EEeeCCCceEEEecCCceEEcCCcccCCcCCCCCchhhhHHHHHHHHHcCCCHHHHHHHHHHHhchheeeccCCCCCCCh
Q psy8856 217 IVTRGELGSDIFLNNERKIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSSLMGSTEISHQGGQKHCPSL 296 (312)
Q Consensus 217 vvt~G~~G~~~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~a~aa~~~~~~g~~~~~~~~ 296 (312)
+||+|++|+++++++++.+++|+++++ ++||+||||+|.|||++++++|+++++|+++|+++|+.++++.|+....|++
T Consensus 238 vvt~G~~G~~~~~~~~~~~~~~~~~v~-vvdt~GAGDaf~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~~G~~~~~p~~ 316 (332)
T 2qcv_A 238 VIKHGVEGSFAYTKAGEAYRGYAYKTK-VLKTFGAGDSYASAFLYALISGKGIETALKYGSASASIVVSKHSSSDAMPSV 316 (332)
T ss_dssp EEECGGGCEEEEETTSCEEEECCBCCC-CSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHC-----CCCCH
T ss_pred EEEECCcceEEEecCCceEEcCCCCcc-ccCCCCcHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHccCCCccCCCCH
Confidence 999999999988763567889999986 9999999999999999999999999999999999999999999998778999
Q ss_pred HHHHHHHHHhh
Q psy8856 297 SEIDQRFKEAF 307 (312)
Q Consensus 297 ~ev~~~~~~~~ 307 (312)
+|+++++++..
T Consensus 317 ~ev~~~l~~~~ 327 (332)
T 2qcv_A 317 EEIEALIEKDE 327 (332)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHhcCC
Confidence 99999987653
No 25
>1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=4.9e-43 Score=309.40 Aligned_cols=282 Identities=21% Similarity=0.263 Sum_probs=233.7
Q ss_pred CcEeeecceeeeeEEecCCcccCCCCccccccceeeeecCCcccccCCchHHHHHHHHHhCCC-ceEEEEeecC--hHHH
Q psy8856 1 MNSLICGSLAFDNIMRFEGKFSNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLLNGN-PLIVSILGKD--GSSY 77 (312)
Q Consensus 1 m~i~~~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~-~~~~~~vG~d--~~~i 77 (312)
++|+++|++++|++..++ ++|. ++ .+.+.......+||++.|+|.+|++||.+ +.++|.+|+| |+.+
T Consensus 15 ~~v~vvG~~~iD~~~~~~-~~p~---~g------~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~i~~vG~D~~G~~l 84 (311)
T 1vm7_A 15 LVISVVGSSNIDIVLKVD-HFTK---PG------ETQKAIEMNVFPGGKGANQAVTVAKIGEKGCRFVTCIGNDDYSDLL 84 (311)
T ss_dssp CCEEEECCCEEEEEEECS-SCCC---TT------CEEECSEEEEEEECHHHHHHHHHHHHHSSCEEEEEEECSSHHHHHH
T ss_pred CCEEEECcceeeEEEecc-cCCC---CC------ceEecCeeeecCCCHHHHHHHHHHHcCCCceEEEEEECCChHHHHH
Confidence 479999999999999998 7764 22 23445566788999999999999999999 9999999999 7889
Q ss_pred HHHHHHcCCccceeeecCCcccceEEEEEecCCCeeEEEeCCccccCCccccC--CcCCceEEEECCCCh-HHHHHHHHH
Q psy8856 78 LKHLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIFHPGAMQLSYDDNCI--NNADIKIAIISPDNC-CNMIKHIKK 154 (312)
Q Consensus 78 ~~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~ 154 (312)
++.|++.|| ++.+.++.+|+.+++.+++++++.+..++++...++++++. .+..+++++++...+ +.+.. .
T Consensus 85 ~~~L~~~gV---~v~~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~---~ 158 (311)
T 1vm7_A 85 IENYEKLGI---TGYIRVSLPTGRAFIEVDKTGQNRIIIFPGANAELKKELIDWNTLSESDILLLQNEIPFETTLE---C 158 (311)
T ss_dssp HHHHHHTTE---EEEEECSSCCCEEEEEECTTSCEEEEEECGGGGGCCGGGCCHHHHTTCSEEEECSSSCHHHHHH---H
T ss_pred HHHHHHCCC---EEEEcCCCCCeEEEEEECCCCCEEEEEecCccccCCHHHhChhhcccCCEEEEeCCCCHHHHHH---H
Confidence 999999999 56665667999999999988888887777766556665553 246889999987554 33333 3
Q ss_pred HHhcCCcEEEcCCCCcccCCHHHHHHHhhcccEEEeCHHHHHHhhcCCC---CCH----HHHhh-cCCEEEEeeCCCceE
Q psy8856 155 ILKLKIPFIFDPGQSLSMFTKEELIKIIKKSSYIIVNEYESKLLVSKTS---LSL----QKINE-QVKVLIVTRGELGSD 226 (312)
Q Consensus 155 ~~~~~~~v~~D~~~~~~~~~~~~l~~ll~~~dvl~~n~~E~~~l~~~~~---~~~----~~l~~-g~~~vvvt~G~~G~~ 226 (312)
+++.+.++++||+.... .+.++++++|++++|++|++.+++... .+. +.+.+ +++.++||+|++|++
T Consensus 159 a~~~~~~v~~Dp~~~~~-----~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvT~G~~G~~ 233 (311)
T 1vm7_A 159 AKRFNGIVIFDPAPAQG-----INEEIFQYLDYLTPNEKEIEALSKDFFGEFLTVEKAAEKFLELGVKNVIVKLGDKGVL 233 (311)
T ss_dssp HHHCCSEEEECCCSCTT-----CCGGGGGGCSEECCBHHHHHHHHHHHHSCCCCHHHHHHHHHHTTCSEEEEECGGGCEE
T ss_pred HHHcCCEEEEeCcchhh-----hhHHHHhhCCEEeCCHHHHHHHhCCCCCChhHHHHHHHHHHHcCCCEEEEEECCCCeE
Confidence 67789999999987422 124688999999999999999987421 122 23333 899999999999999
Q ss_pred EEecCCceEEcCCcccCCcCCCCCchhhhHHHHHHHHHcCCCHHHHHHHHHHHhchheeeccCCCCCCChHHHHHHHHH
Q psy8856 227 IFLNNERKIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSSLMGSTEISHQGGQKHCPSLSEIDQRFKE 305 (312)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~a~aa~~~~~~g~~~~~~~~~ev~~~~~~ 305 (312)
++++ ++.+++|+++++ ++||+||||+|.|||++++.+|+++++|+++|+++|+.++++.|+....|+.+|+++++++
T Consensus 234 ~~~~-~~~~~~~~~~v~-~vdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev~~~l~~ 310 (311)
T 1vm7_A 234 LVNK-NEKKHFPTFKVK-AVDTTAAGDVFNGAFAVALSEGKNPEEAVIFGTAAAAISVTRLGAQSSIPAREEVEAFLKN 310 (311)
T ss_dssp EEET-TEEEEECCCCCC-CSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTSSSSGGGCCCHHHHHHHHHT
T ss_pred EEeC-CceEEecCCCcc-cCCCCccHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHhCcCCccccCCCHHHHHHHHhc
Confidence 9888 888899999886 9999999999999999999999999999999999999999999987668999999998864
No 26
>2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A*
Probab=100.00 E-value=2.1e-43 Score=311.86 Aligned_cols=285 Identities=14% Similarity=0.195 Sum_probs=230.0
Q ss_pred CcEeeecceeeeeEEecCCcccCCCCccccccceeeeecCCcccccCCchHHHHHHHHHhCCCceEEEEeecC--hHHHH
Q psy8856 1 MNSLICGSLAFDNIMRFEGKFSNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLLNGNPLIVSILGKD--GSSYL 78 (312)
Q Consensus 1 m~i~~~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~~~~~~~vG~d--~~~i~ 78 (312)
++|+++|++++|++...+ ++ ..+.......+||++.|+|.+|++||.++.++|.+|+| |+.++
T Consensus 2 ~~v~viG~~~~D~~~~~~---------~~------~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~vG~D~~g~~i~ 66 (311)
T 2dcn_A 2 AKLITLGEILIEFNALSP---------GP------LRHVSYFEKHVAGSEANYCVAFIKQGNECGIIAKVGDDEFGYNAI 66 (311)
T ss_dssp CEEEEESCCEEEEEESSS---------SC------GGGCCEEEEEEECHHHHHHHHHHHTTCEEEEECEEESSHHHHHHH
T ss_pred CCEEEECCceEEEecCCC---------Cc------ccccceeeecCCChHHHHHHHHHHCCCceEEEEEeCCCHHHHHHH
Confidence 379999999999986332 11 11234456789999999999999999999999999999 78899
Q ss_pred HHHHHcCCccceeeecCCcccceEEEEEecCCC--eeEEEeC--CccccCCccccCC--cCCceEEEECCCC-------h
Q psy8856 79 KHLKYLGISNKYIQKINSMFTAQCFIVTDVNNN--QITIFHP--GAMQLSYDDNCIN--NADIKIAIISPDN-------C 145 (312)
Q Consensus 79 ~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~~-------~ 145 (312)
+.|++.||+++++.+.++.+|+.+++..+++++ +.+.+.. ++...++.+++.. +.+++++++++.. .
T Consensus 67 ~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~ 146 (311)
T 2dcn_A 67 EWLRGQGVDVSHMKIDPSAPTGIFFIQRHYPVPLKSESIYYRKGSAGSKLSPEDVDEEYVKSADLVHSSGITLAISSTAK 146 (311)
T ss_dssp HHHHHTTCBCTTCEEETTSCCCEEEEEESCSSTTCEEEEEECTTCTGGGCCGGGCCHHHHTTCSEEEEEHHHHHSCHHHH
T ss_pred HHHHHcCCCcceEEEcCCCCceEEEEEECCCCCccceEEEecCcChhhhCChhhcChHHHcCCCEEEEeCcccccChHHH
Confidence 999999999999887777799999998887776 6555443 3444555555532 4688999987532 2
Q ss_pred HHHHHHHHHHHhcCCcEEEcCCCCcccCCH----HHHHHHhh--cccEEEeCHHHHHHhhcCCCCC--HHHHhhcCCEEE
Q psy8856 146 CNMIKHIKKILKLKIPFIFDPGQSLSMFTK----EELIKIIK--KSSYIIVNEYESKLLVSKTSLS--LQKINEQVKVLI 217 (312)
Q Consensus 146 ~~~~~~~~~~~~~~~~v~~D~~~~~~~~~~----~~l~~ll~--~~dvl~~n~~E~~~l~~~~~~~--~~~l~~g~~~vv 217 (312)
+.+.++++.+++. ++||+.+...|.. +.+.++++ ++|++++|++|++.+++..+.. .+.+.+.++.++
T Consensus 147 ~~~~~~~~~a~~~----~~D~~~~~~~~~~~~~~~~~~~~l~~~~~dil~~N~~E~~~l~g~~~~~~~~~~l~~~~~~vv 222 (311)
T 2dcn_A 147 EAVYKAFEIASNR----SFDTNIRLKLWSAEEAKREILKLLSKFHLKFLITDTDDSKIILGESDPDKAAKAFSDYAEIIV 222 (311)
T ss_dssp HHHHHHHHHCSSE----EEECCCCTTTSCHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHSCCCHHHHHHHHTTTEEEEE
T ss_pred HHHHHHHHHHHHh----CcCccCchhhCChHHHHHHHHHHHhhcCCcEEECCHHHHHHHhCCCCHHHHHHHHHHhCCEEE
Confidence 4455556555433 8999987777753 35678999 9999999999999999864321 123333477899
Q ss_pred EeeCCCceEEEecCCceEEcCCcccCCcCCCCCchhhhHHHHHHHHHcCCCHHHHHHHHHHHhchheeeccCCCCCCChH
Q psy8856 218 VTRGELGSDIFLNNERKIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSSLMGSTEISHQGGQKHCPSLS 297 (312)
Q Consensus 218 vt~G~~G~~~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~a~aa~~~~~~g~~~~~~~~~ 297 (312)
||+|++|++++++ ++.+++|+++++ ++||+||||+|.|||++++.+|+++++|+++|+++|+.++++.|+..+.|+.+
T Consensus 223 vt~G~~G~~~~~~-~~~~~~~~~~v~-vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~a~~~aa~~v~~~G~~~~~~~~~ 300 (311)
T 2dcn_A 223 MKLGPKGAIVYYD-GKKYYSSGYQVP-VEDVTGAGDALGGTFLSLYYKGFEMEKALDYAIVASTLNVMIRGDQENLPTTK 300 (311)
T ss_dssp EEEETTEEEEEET-TEEEEEECCCCC-CSCCTTHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHTTSSSSSTTCCCHH
T ss_pred EEECCCCcEEEeC-CcEEEeCCcccc-ccCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCCCCCCCCCHH
Confidence 9999999999988 888999999986 99999999999999999999999999999999999999999999987779999
Q ss_pred HHHHHHHHh
Q psy8856 298 EIDQRFKEA 306 (312)
Q Consensus 298 ev~~~~~~~ 306 (312)
|+++++++.
T Consensus 301 ~v~~~~~~~ 309 (311)
T 2dcn_A 301 DIETFLREM 309 (311)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhc
Confidence 999988753
No 27
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A
Probab=100.00 E-value=3.5e-43 Score=311.68 Aligned_cols=282 Identities=16% Similarity=0.156 Sum_probs=235.3
Q ss_pred CcEeeecceeeee-EEecCCcccCCCCccccccceeeeecCCcccccCCchHHHHHHHHHhCCCceEEEEeecC-hHHHH
Q psy8856 1 MNSLICGSLAFDN-IMRFEGKFSNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLLNGNPLIVSILGKD-GSSYL 78 (312)
Q Consensus 1 m~i~~~G~~~~D~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~~~~~~~vG~d-~~~i~ 78 (312)
|.+.+.+|+++|+ +..++ ++. ++ .+.+.......+||++.|+|.+|++||.++.++|.+|+| |+.++
T Consensus 3 mi~tvt~np~iD~~~~~v~-~~~----~g------~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~d~g~~i~ 71 (320)
T 3ie7_A 3 LIYTITLNPAIDRLLFIRG-ELE----KR------KTNRVIKTEFDCGGKGLHVSGVLSKFGIKNEALGIAGSDNLDKLY 71 (320)
T ss_dssp CEEEEESSCEEEEEEEESS-SCC----TT------SCCCCSEEEEEEESHHHHHHHHHHHHTCCEEEEEEEESTTHHHHH
T ss_pred eEEEEecchHHeeeEEEcC-Ccc----CC------CeeEeceeeecCCchHHHHHHHHHHcCCCeEEEEEecCchHHHHH
Confidence 7899999999999 99998 662 33 344555668899999999999999999999999999999 89999
Q ss_pred HHHHHcCCccceeeecCCcccceEEEEEecCCC--eeEEEeCCccccCCccccC--------CcCCceEEEECCCC----
Q psy8856 79 KHLKYLGISNKYIQKINSMFTAQCFIVTDVNNN--QITIFHPGAMQLSYDDNCI--------NNADIKIAIISPDN---- 144 (312)
Q Consensus 79 ~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~---- 144 (312)
+.|++.||+++++...++ +|+.+++.++ +++ +++...++. .++++++. .+..++++++++..
T Consensus 72 ~~l~~~gv~~~~v~~~~~-~t~~~~~~~~-~g~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~ 147 (320)
T 3ie7_A 72 AILKEKHINHDFLVEAGT-STRECFVVLS-DDTNGSTMIPEAGF--TVSQTNKDNLLKQIAKKVKKEDMVVIAGSPPPHY 147 (320)
T ss_dssp HHHHHTTCCBCCEEETTC-CCEEEEEEEE-TTCSCCEEEECCCC--CCCHHHHHHHHHHHHHHCCTTCEEEEESCCCTTC
T ss_pred HHHHHcCCceEEEEecCC-CCceEEEEEE-CCCceeEEEeCCCC--CCCHHHHHHHHHHHHHHhcCCCEEEEeCCCCCCC
Confidence 999999999999845455 8999988888 566 666555543 34433332 25688999997543
Q ss_pred -hHHHHHHHHHHHhcCCcEEEcCCCCcccCCHHHHHHHhh-cccEEEeCHHHHHHhhcCCCC-CHHH---HhhcCCEEEE
Q psy8856 145 -CCNMIKHIKKILKLKIPFIFDPGQSLSMFTKEELIKIIK-KSSYIIVNEYESKLLVSKTSL-SLQK---INEQVKVLIV 218 (312)
Q Consensus 145 -~~~~~~~~~~~~~~~~~v~~D~~~~~~~~~~~~l~~ll~-~~dvl~~n~~E~~~l~~~~~~-~~~~---l~~g~~~vvv 218 (312)
.+.+.++++.+++.+.++++||+. ..+.+++. .+|++++|++|++.+++.... +.++ +.+.++.++|
T Consensus 148 ~~~~~~~~~~~a~~~g~~v~~D~~~-------~~l~~~l~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~~~~vvv 220 (320)
T 3ie7_A 148 TLSDFKELLRTVKATGAFLGCDNSG-------EYLNLAVEMGVDFIKPNEDEVIAILDEKTNSLEENIRTLAEKIPYLVV 220 (320)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECCH-------HHHHHHHHHCCSEECCBTTGGGGGSCTTCCCHHHHHHHHTTTCSEEEE
T ss_pred CHHHHHHHHHHHHhcCCEEEEECCh-------HHHHHHHhcCCeEEeeCHHHHHHHhCCCcCCCHHHHHHHHhhCCEEEE
Confidence 367888899999999999999963 34566665 999999999999999987654 3333 3335899999
Q ss_pred eeCCCceEEEecCCceEEcCCcccCCcCCCCCchhhhHHHHHHHHHcCCCHHHHHHHHHHHhchheeeccCCCCCCChHH
Q psy8856 219 TRGELGSDIFLNNERKIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSSLMGSTEISHQGGQKHCPSLSE 298 (312)
Q Consensus 219 t~G~~G~~~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~a~aa~~~~~~g~~~~~~~~~e 298 (312)
|+|++|++++++ ++.+++|+++++ ++||+||||+|.|||++++.+|+++++|+++|+++|+++|++.|+. .|+.+|
T Consensus 221 t~G~~G~~~~~~-~~~~~~~~~~v~-vvdttGAGDaF~ag~~~~l~~g~~~~~a~~~A~a~aa~~v~~~G~~--~~~~~e 296 (320)
T 3ie7_A 221 SLGAKGSICAHN-GKLYQVIPPKVQ-ERNDTGAGDVFVGAFIAGLAMNMPITETLKVATGCSASKVMQQDSS--SFDLEA 296 (320)
T ss_dssp ECGGGCEEEEET-TEEEEEECCCCC-CSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSSS--CCCHHH
T ss_pred EcCCCceEEEeC-CcEEEEeCCccC-CCCCcCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhCcCCC--CCCHHH
Confidence 999999999998 889999999986 9999999999999999999999999999999999999999999965 899999
Q ss_pred HHHHHHHhhc
Q psy8856 299 IDQRFKEAFG 308 (312)
Q Consensus 299 v~~~~~~~~~ 308 (312)
+++++++..-
T Consensus 297 v~~~~~~~~i 306 (320)
T 3ie7_A 297 AGKLKNQVSI 306 (320)
T ss_dssp HHHHGGGCEE
T ss_pred HHHHhhCeEE
Confidence 9999887543
No 28
>3vas_A Putative adenosine kinase; ribokinase, enzyme, transferase; HET: ADN; 2.26A {Schistosoma mansoni} PDB: 4dc3_A* 3vaq_A* 3uq6_A* 3uq9_A*
Probab=100.00 E-value=8.1e-44 Score=321.53 Aligned_cols=295 Identities=17% Similarity=0.143 Sum_probs=240.1
Q ss_pred cEeeecceeeeeEEecCCcc------c----CCCCccccccceeeeecCCcccccCCchHHHHHHHHHh---CCCceEEE
Q psy8856 2 NSLICGSLAFDNIMRFEGKF------S----NSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLL---NGNPLIVS 68 (312)
Q Consensus 2 ~i~~~G~~~~D~~~~~~~~~------~----~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l---G~~~~~~~ 68 (312)
+|+++|++++|++..+++.| . ..+....++..+...........+||++.|+|.++++| |.++.++|
T Consensus 26 ~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~l~~~~~~P~~ge~~~~~~~~~~~GG~~~N~A~~la~L~~~G~~~~~ig 105 (370)
T 3vas_A 26 YVFGMGNPLLDIIVDADDFMYRKYNLKKDNIVLAEEKHMTIYDEIQKKKKLNYIAGGATLNTVKMIQWIIQKPFVCSYVG 105 (370)
T ss_dssp CEEEEECCEEEEEEECCTHHHHHTTCCTTEEEECCGGGTHHHHHHTTSSSCEEEEECHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred cEEEECCcceeEEEecCHHHHHHcCCCCCceEEccHHHHHHHHHHhhcCCeEEecCCHHHHHHHHHHHhcCCCCcEEEEE
Confidence 69999999999999998411 0 00001122333444445667889999999999999999 99999999
Q ss_pred EeecC--hHHHHHHHHHcCCccceeeecCCcccceEEEEEecCCCeeEEEeCCccccCCccccCC------cCCceEEEE
Q psy8856 69 ILGKD--GSSYLKHLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIFHPGAMQLSYDDNCIN------NADIKIAII 140 (312)
Q Consensus 69 ~vG~d--~~~i~~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 140 (312)
.+|+| |+.+++.|++.||+++++...++.+|+.++++++ ++++.+..+.++...++++++.. +.+++++++
T Consensus 106 ~vG~D~~G~~~~~~L~~~GV~~~~~~~~~~~~Tg~~~i~v~-~g~rt~~~~~ga~~~l~~~~~~~~~~~~~~~~~~~v~~ 184 (370)
T 3vas_A 106 CIGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAVLVS-EKLRSMVTYLGAACDLSLAHIEQPHVWSLVEKAQVYYI 184 (370)
T ss_dssp EECSSHHHHHHHHHHHHTTCEECCEECCTTCCEEEEEEEEC-SSCEEEEEEEEGGGGCCHHHHTSHHHHHHHHHCSEEEE
T ss_pred EEcCChhHHHHHHHHHHcCCcccccccCCCCCceEEEEEEe-CCceeEEEccchhhhCCHHHcCchhhHHHHhhCCEEEE
Confidence 99999 7889999999999999887756679999999998 78888877777766677766653 467899999
Q ss_pred CCCC----hHHHHHHHHHHHhcCCcEEEcCCCCc-ccCCHHHHHHHhhcccEEEeCHHHHHHhhcCCCC---CH----HH
Q psy8856 141 SPDN----CCNMIKHIKKILKLKIPFIFDPGQSL-SMFTKEELIKIIKKSSYIIVNEYESKLLVSKTSL---SL----QK 208 (312)
Q Consensus 141 ~~~~----~~~~~~~~~~~~~~~~~v~~D~~~~~-~~~~~~~l~~ll~~~dvl~~n~~E~~~l~~~~~~---~~----~~ 208 (312)
++.. .+.+.++++.+++.+.++++|+.... .....+.+.++++++|++++|++|++.+++.... +. +.
T Consensus 185 ~g~~~~~~~~~~~~~~~~a~~~g~~v~ld~~~~~~~~~~~~~l~~ll~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~~~ 264 (370)
T 3vas_A 185 AGFVINTCYEGMLKIAKHSLENEKLFCFNLSAPFLSQFNTKEVDEMISYSNIVFGNESEAEAYGEVHGLLEDTVHATARY 264 (370)
T ss_dssp EGGGHHHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHCHHHHHHHHTTCSEEEEEHHHHHHHHHHTTCCSSHHHHHHHH
T ss_pred EeeeccCCHHHHHHHHHHHHHcCCEEEEECCcHHHHHHHHHHHHHHHhhCCEEEcCHHHHHHHhcccCCCccCHHHHHHH
Confidence 8653 46778888899999999999997421 1113466789999999999999999999886432 22 23
Q ss_pred Hhh--------cCCEEEEeeCCCceEEEe--cCCceEEcCCccc--CCcCCCCCchhhhHHHHHHHHHcCCCHHHHHHHH
Q psy8856 209 INE--------QVKVLIVTRGELGSDIFL--NNERKIKIPCVKA--DRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLS 276 (312)
Q Consensus 209 l~~--------g~~~vvvt~G~~G~~~~~--~~~~~~~~~~~~~--~~~vdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a 276 (312)
+.+ +++.||||+|++|+++++ + ++.+++|++++ .+++||+||||+|.|||++++++|+++++|+++|
T Consensus 265 l~~~~~~~~~~g~~~VvvT~G~~Ga~~~~~~~-~~~~~~~~~~v~~~~vvDttGAGDaF~ag~l~~l~~g~~l~~a~~~A 343 (370)
T 3vas_A 265 IADLPFADGKKRKRLVIITRGKNPLLYTDSSD-SEIHQFMVEQFKDDQIIDTNGAGDAFAAGFIADYIRGKPMITSLHAA 343 (370)
T ss_dssp HHHSCCTTCCCCCCEEEEEETTEEEEEEETTC-SSCEEECCCCCCTTTCSCCTTHHHHHHHHHHHHHTTTCCHHHHHHHH
T ss_pred HHhhcccccccCCCEEEEecCCCceEEEEcCC-CeEEEEecccccCCCcCCCCChHHHHHHHHHHHHHCCCCHHHHHHHH
Confidence 443 889999999999999998 7 88899999887 2499999999999999999999999999999999
Q ss_pred HHHhchheeeccCCCCCCChHHHH
Q psy8856 277 SLMGSTEISHQGGQKHCPSLSEID 300 (312)
Q Consensus 277 ~a~aa~~~~~~g~~~~~~~~~ev~ 300 (312)
+++|+++|++.|+. .|+.+++.
T Consensus 344 ~aaAa~~v~~~G~~--~p~~~~~~ 365 (370)
T 3vas_A 344 VKAAAYIICRSGFS--LGSRDSYS 365 (370)
T ss_dssp HHHHHHHHTSSSSC--CCCGGGGC
T ss_pred HHHHHHHHcccCCc--CCCCccce
Confidence 99999999999998 77887764
No 29
>2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=1.7e-43 Score=313.27 Aligned_cols=288 Identities=17% Similarity=0.115 Sum_probs=230.7
Q ss_pred cEeeecceeeeeEEecCCcccCCCCccccccceeeeecCCcccccCCchHHHHHHHHHhCCCceEEEEeecC--hHHHHH
Q psy8856 2 NSLICGSLAFDNIMRFEGKFSNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLLNGNPLIVSILGKD--GSSYLK 79 (312)
Q Consensus 2 ~i~~~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~~~~~~~vG~d--~~~i~~ 79 (312)
+|+++|++++|++..++ +.|. +++ +... .....+||++.|+|.+|++||.++.++|.+|+| |+.+++
T Consensus 5 ~i~viG~~~~D~~~~~~-~~~~---~~~------~~~~-~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~l~~ 73 (317)
T 2nwh_A 5 KILVLGGAHIDRRGMIE-TETA---PGA------SNPG-SWMEEAGGGGFNAARNLSRLGFEVRIIAPRGGDVTGEVVAE 73 (317)
T ss_dssp EEEEESCCEEEEEEEES-SSCC---TTS------CCCE-EEEEEEECHHHHHHHHHHHTTCEEEEECEEESSHHHHHHHH
T ss_pred eEEEECchheEEeeccC-CCCC---CCC------CceE-eEEEeCCcHHHHHHHHHHhcCCCcEEEEeecCCchHHHHHH
Confidence 69999999999998887 5432 222 1111 246789999999999999999999999999999 788999
Q ss_pred HHHHcCCccceeeecCCcccceEEEEEecCCCeeEEEeCC-ccccCCccccCC------cCCceEEEECCC-ChHHHHHH
Q psy8856 80 HLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIFHPG-AMQLSYDDNCIN------NADIKIAIISPD-NCCNMIKH 151 (312)
Q Consensus 80 ~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~------~~~~~~~~~~~~-~~~~~~~~ 151 (312)
.|+++||++++ ...++.+|+.+++.+++++++.+.+... ....++++.+.. +..++++++++. ..+.+..+
T Consensus 74 ~L~~~gV~~~~-~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 152 (317)
T 2nwh_A 74 AARQAGVEDTP-FTFLDRRTPSYTAILERDGNLVIALADMDLYKLFTPRRLKVRAVREAIIASDFLLCDANLPEDTLTAL 152 (317)
T ss_dssp HHHHTTCEECC-EEETTSCCCEEEEEECTTSCEEEEEEECGGGGGCCHHHHTSHHHHHHHHHCSEEEEETTSCHHHHHHH
T ss_pred HHHHcCCCCCC-cccCCCCCceEEEEEcCCCCEEEEEcchHHHhhCCHHHhhhhhhhhHhccCCEEEEeCCCCHHHHHHH
Confidence 99999999998 5556679999999998888887655443 333455444332 346788888765 45788888
Q ss_pred HHHHHhcCCcEEEcCCCCcccCCHHHHHHHhhcccEEEeCHHHHHHhhcCCCCC----HHHHh-hcCCEEEEeeCCCceE
Q psy8856 152 IKKILKLKIPFIFDPGQSLSMFTKEELIKIIKKSSYIIVNEYESKLLVSKTSLS----LQKIN-EQVKVLIVTRGELGSD 226 (312)
Q Consensus 152 ~~~~~~~~~~v~~D~~~~~~~~~~~~l~~ll~~~dvl~~n~~E~~~l~~~~~~~----~~~l~-~g~~~vvvt~G~~G~~ 226 (312)
++.+++.+.++++||+.. +..+.+.++++++|++++|++|++.+++....+ .+.+. .+++.++||.|++|++
T Consensus 153 ~~~a~~~g~~v~~Dp~~~---~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~ 229 (317)
T 2nwh_A 153 GLIARACEKPLAAIAISP---AKAVKLKAALGDIDILFMNEAEARALTGETAENVRDWPNILRKAGLSGGVVTRGASEVV 229 (317)
T ss_dssp HHHHHHTTCCEEEECCSH---HHHGGGTTTGGGCSEEEEEHHHHHHHHC-----CTTHHHHHHHTTCCCEEEEETTTEEE
T ss_pred HHHHHhcCCeEEEeCCCH---HHHHHHHHHhhhCeEecCCHHHHHHHhCCChhHHHHHHHHHHHcCCCEEEEEECCCcEE
Confidence 999999999999999752 112335678899999999999999998862111 23343 3899999999999999
Q ss_pred EEecCCceEEcCCcccCCcCCCCCchhhhHHHHHHHHHcCCCHHHHHHHHHHHhchheeeccCCCCCCChHHHHHHHHH
Q psy8856 227 IFLNNERKIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSSLMGSTEISHQGGQKHCPSLSEIDQRFKE 305 (312)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~a~aa~~~~~~g~~~~~~~~~ev~~~~~~ 305 (312)
+++++++.+++|+++++ ++||+||||+|.|||++++.+|+++++|+++|+++|+.++++.|+..+.|+++|+++.+..
T Consensus 230 ~~~~~~~~~~~~~~~v~-~vdt~GAGDaf~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~~G~~~~~~~~~~v~~~~~~ 307 (317)
T 2nwh_A 230 AFNGTEKAILHPPLIRE-VKDVTGAGDAMASGYLAAIAEGKTIREALRQGAAAAAITVQSSFATSQDLSKDSVEAMLGL 307 (317)
T ss_dssp EECSSCEEEECCCCSSS-CSCCCCSSHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHSSTTCCGGGCCHHHHHHHHTT
T ss_pred EEcCCCceEEeCCCCcc-ccCCCChhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHhHhhh
Confidence 98862346899999986 9999999999999999999999999999999999999999999998777899999886543
No 30
>2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A*
Probab=100.00 E-value=2e-42 Score=307.98 Aligned_cols=279 Identities=18% Similarity=0.188 Sum_probs=228.1
Q ss_pred CcEeeecceeeeeEEecCCcccCCCCccccccceeeeecCCcccccCCchHHHHHHHHHhCCCceEEEEeecC-hHHHHH
Q psy8856 1 MNSLICGSLAFDNIMRFEGKFSNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLLNGNPLIVSILGKD-GSSYLK 79 (312)
Q Consensus 1 m~i~~~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~~~~~~~vG~d-~~~i~~ 79 (312)
|.++++|++++|++..++ ++. + +.+.+.......+||++.|+|.+|++||.++.++|.+|++ |+.+++
T Consensus 21 Mi~~v~G~~~~D~~~~~~-~~~----~------g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~~~G~~l~~ 89 (330)
T 2jg1_A 21 MILTLTLNPSVDISYPLT-ALK----L------DDVNRVQEVSKTAGGKGLNVTRVLAQVGEPVLASGFIGGELGQFIAK 89 (330)
T ss_dssp CEEEEESSCEEEEEEEES-CCC----T------TSEEEESCCEEEEECHHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHH
T ss_pred EEEEEecchhheEEEecC-Ccc----C------CceEEeceEEEcCCchHHHHHHHHHHhCCCeEEEEEecchhHHHHHH
Confidence 778899999999999998 551 2 2344556678899999999999999999999999999977 889999
Q ss_pred HHHHcCCccceeeecCCcccceEEEEEecCCCeeEEEeCCccccCCccccC--------CcCCceEEEECCCC-----hH
Q psy8856 80 HLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIFHPGAMQLSYDDNCI--------NNADIKIAIISPDN-----CC 146 (312)
Q Consensus 80 ~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~-----~~ 146 (312)
.|++.||+++++...+ .|+.++++++++ +++....+++ .++++++. .+++++++++++.. .+
T Consensus 90 ~L~~~gV~~~~v~~~~--~t~~~~~~v~~~-~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~ 164 (330)
T 2jg1_A 90 KLDHADIKHAFYNIKG--ETRNCIAILHEG-QQTEILEQGP--EIDNQEAAGFIKHFEQMMEKVEAVAISGSLPKGLNQD 164 (330)
T ss_dssp HHHHTTCEECCEEESS--CCEEEEEEEETT-EEEEEEECCC--BCCHHHHHHHHHHHHHHGGGCSEEEEESCCCBTSCTT
T ss_pred HHHHCCCceeEEEccC--CCeeEEEEEeCC-CcEEEECCCC--CCCHHHHHHHHHHHHHhcCCCCEEEEECCCCCCCCHH
Confidence 9999999999987654 367777777765 5554444443 23333322 14678899887543 36
Q ss_pred HHHHHHHHHHhcCCcEEEcCCCCcccCCHHHHHHHhh---cccEEEeCHHHHHHhhcCCCC-C---HHH----Hh-hcCC
Q psy8856 147 NMIKHIKKILKLKIPFIFDPGQSLSMFTKEELIKIIK---KSSYIIVNEYESKLLVSKTSL-S---LQK----IN-EQVK 214 (312)
Q Consensus 147 ~~~~~~~~~~~~~~~v~~D~~~~~~~~~~~~l~~ll~---~~dvl~~n~~E~~~l~~~~~~-~---~~~----l~-~g~~ 214 (312)
.+.++++.+++.+.++++||+. ..+.++++ ++|++++|++|++.+++.... + .++ +. .+++
T Consensus 165 ~~~~~~~~a~~~g~~v~~D~~~-------~~l~~~l~~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~l~~~g~~ 237 (330)
T 2jg1_A 165 YYAQIIERCQNKGVPVILDCSG-------ATLQTVLENPYKPTVIKPNISELYQLLNQPLDESLESLKQAVSQPLFEGIE 237 (330)
T ss_dssp HHHHHHHHHHTTTCCEEEECCH-------HHHHHHHTSSSCCSEECCBHHHHHHHTTSCCCCCHHHHHHHHHSGGGTTCS
T ss_pred HHHHHHHHHHHCCCEEEEECCc-------HHHHHHHhccCCceEEEeCHHHHHHHhCCCCCCCHHHHHHHHHHHHHcCCC
Confidence 7888899999999999999963 34667776 899999999999999886432 2 211 22 2789
Q ss_pred EEEEeeCCCceEEEecCCceEEcCCcccCCcCCCCCchhhhHHHHHHHHHcCCCHHHHHHHHHHHhchheeeccCCCCCC
Q psy8856 215 VLIVTRGELGSDIFLNNERKIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSSLMGSTEISHQGGQKHCP 294 (312)
Q Consensus 215 ~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~a~aa~~~~~~g~~~~~~ 294 (312)
.++||+|++|++++++ ++.+++|+++++ ++||+||||+|.|||++++++|+++++|+++|+++|++++++.|+. .|
T Consensus 238 ~VvvT~G~~Ga~~~~~-~~~~~~~~~~v~-vvDttGAGDaF~ag~~~~l~~g~~l~~al~~A~a~aa~~v~~~G~~--~~ 313 (330)
T 2jg1_A 238 WIIVSLGAQGAFAKHN-HTFYRVNIPTIS-VLNPVGSGDSTVAGITSAILNHENDHDLLKKANTLGMLNAQEAQTG--YV 313 (330)
T ss_dssp EEEEECGGGCEEEEET-TEEEEEECCCCC-CSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSSS--CC
T ss_pred EEEEeecCCceEEEeC-CCEEEEeCCCcc-ccCCCcHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcCCC--CC
Confidence 9999999999999988 888899999986 9999999999999999999999999999999999999999999986 79
Q ss_pred ChHHHHHHHHHh
Q psy8856 295 SLSEIDQRFKEA 306 (312)
Q Consensus 295 ~~~ev~~~~~~~ 306 (312)
+.+|+++++++.
T Consensus 314 ~~~ev~~~~~~i 325 (330)
T 2jg1_A 314 NLNNYDDLFNQI 325 (330)
T ss_dssp CGGGHHHHHTTC
T ss_pred CHHHHHHHHhce
Confidence 999999998764
No 31
>3umo_A 6-phosphofructokinase isozyme 2; glycolysis, transferase, PFK, enzyme; HET: ATP; 1.70A {Escherichia coli} PDB: 3n1c_A* 3cqd_A* 3ump_A* 3uqd_A* 3uqe_A*
Probab=100.00 E-value=4e-42 Score=303.47 Aligned_cols=278 Identities=19% Similarity=0.174 Sum_probs=228.8
Q ss_pred EeeecceeeeeEEecCCcccCCCCccccccceeeeecCCcccccCCchHHHHHHHHHhCCCceEEEEeecC-hHHHHHHH
Q psy8856 3 SLICGSLAFDNIMRFEGKFSNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLLNGNPLIVSILGKD-GSSYLKHL 81 (312)
Q Consensus 3 i~~~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~~~~~~~vG~d-~~~i~~~l 81 (312)
+.+.+|+++|++..++ +++ + +.+.+.......+||++.|+|.+|++||.++.++|.+|+| |+.+++.|
T Consensus 5 ~~v~~n~~~D~~~~v~-~~~----~------g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~d~g~~i~~~l 73 (309)
T 3umo_A 5 YTLTLAPSLDSATITP-QIY----P------EGKLRCTAPVFEPGGGGINVARAIAHLGGSATAIFPAGGATGEHLVSLL 73 (309)
T ss_dssp EEECSSCEEEEEEEES-CCC----S------SSEEECCCCEEEEESHHHHHHHHHHHTTCCEEEEEEECHHHHHHHHHHH
T ss_pred EEEecchhheEEEEcC-ccc----C------CCeEEeceeeecCCchHHHHHHHHHHcCCCeEEEEEecCchHHHHHHHH
Confidence 5555799999999999 662 2 4466778889999999999999999999999999999999 88999999
Q ss_pred HHcCCccceeeecCCcccceEEEEEec-CCCeeEEEeCCccccCCccccC-------CcCCceEEEECCC-----ChHHH
Q psy8856 82 KYLGISNKYIQKINSMFTAQCFIVTDV-NNNQITIFHPGAMQLSYDDNCI-------NNADIKIAIISPD-----NCCNM 148 (312)
Q Consensus 82 ~~~gi~~~~~~~~~~~~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~-----~~~~~ 148 (312)
+++||+++++.... +|+.++.+++. +++++....+++. ++++++. .+...+++++++. ..+.+
T Consensus 74 ~~~gv~~~~v~~~~--~t~~~~~~~~~~~g~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 149 (309)
T 3umo_A 74 ADENVPVATVEAKD--WTRQNLHVHVEASGEQYRFVMPGAA--LNEDEFRQLEEQVLEIESGAILVISGSLPPGVKLEKL 149 (309)
T ss_dssp HHTTCCEEEEECSS--CCCCCEEEEETTTCCEEEEECCCCC--CCHHHHHHHHHHHTTSCTTCEEEEESCCCTTCCHHHH
T ss_pred HHcCCceEEEEecC--CCeeEEEEEECCCCcEEEEEcCCCC--CCHHHHHHHHHHHHhcCCCCEEEEEccCCCCCCHHHH
Confidence 99999999887643 45555444443 6777776666542 4333331 2346678888764 34778
Q ss_pred HHHHHHHHhcCCcEEEcCCCCcccCCHHHHHHHhhc--ccEEEeCHHHHHHhhcCCCCC---H----HHHhh-cC-CEEE
Q psy8856 149 IKHIKKILKLKIPFIFDPGQSLSMFTKEELIKIIKK--SSYIIVNEYESKLLVSKTSLS---L----QKINE-QV-KVLI 217 (312)
Q Consensus 149 ~~~~~~~~~~~~~v~~D~~~~~~~~~~~~l~~ll~~--~dvl~~n~~E~~~l~~~~~~~---~----~~l~~-g~-~~vv 217 (312)
.++++.+++.+.++++||. .+.+.++++. +|++++|++|++.+++....+ . +.+.+ +. +.++
T Consensus 150 ~~~~~~a~~~~~~v~~D~~-------~~~l~~~l~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~~vv 222 (309)
T 3umo_A 150 TQLISAAQKQGIRCIVDSS-------GEALSAALAIGNIELVKPNQKELSALVNRELTQPDDVRKAAQEIVNSGKAKRVV 222 (309)
T ss_dssp HHHHHHHHHTTCEEEEECC-------HHHHHHHTSSCCBSEECCBHHHHHHHHTSCCCSTTHHHHHHHHHHHTTSBSCEE
T ss_pred HHHHHHHHhcCCEEEEECC-------cHHHHHHhccCCCeEEEeCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCcEEE
Confidence 8899999999999999995 3456778887 599999999999999875332 1 23333 55 8999
Q ss_pred EeeCCCceEEEecCCceEEcCCcccCCcCCCCCchhhhHHHHHHHHHcCCCHHHHHHHHHHHhchheeeccCCCCCCChH
Q psy8856 218 VTRGELGSDIFLNNERKIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSSLMGSTEISHQGGQKHCPSLS 297 (312)
Q Consensus 218 vt~G~~G~~~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~a~aa~~~~~~g~~~~~~~~~ 297 (312)
||+|++|++++++ ++.+++|+++++ ++||+||||+|.|||++++.+|+++++|+++|+++|+++|++.|+. .|+++
T Consensus 223 vt~G~~G~~~~~~-~~~~~~~~~~v~-vvdttGAGD~f~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~~G~~--~~~~~ 298 (309)
T 3umo_A 223 VSLGPQGALGVDS-ENCIQVVPPPVK-SQSTVGAGDSMVGAMTLKLAENASLEEMVRFGVAAGSAATLNQGTR--LCSHD 298 (309)
T ss_dssp EECGGGCEEEECS-SCEEEECCCSCC-CSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTSSTTC--CCCHH
T ss_pred EEcCcccEEEEEC-CcEEEEeCCCcC-CCCCcChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCCCC--CCCHH
Confidence 9999999999998 888999999986 9999999999999999999999999999999999999999999997 89999
Q ss_pred HHHHHHHHh
Q psy8856 298 EIDQRFKEA 306 (312)
Q Consensus 298 ev~~~~~~~ 306 (312)
|+++++++.
T Consensus 299 ev~~~l~~~ 307 (309)
T 3umo_A 299 DTQKIYAYL 307 (309)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999999864
No 32
>3uq6_A Adenosine kinase, putative; ribokinase, transferase; HET: ADN AMP; 2.30A {Schistosoma mansoni} PDB: 3uq9_A*
Probab=100.00 E-value=2.4e-43 Score=318.77 Aligned_cols=299 Identities=17% Similarity=0.172 Sum_probs=230.6
Q ss_pred EeeecceeeeeEEecCCcccC--CCCccc--------cccceeeeecCCcccccCCchHHHHHHHHHhCCC---ceEEEE
Q psy8856 3 SLICGSLAFDNIMRFEGKFSN--SLLPDQ--------LDKINVSFYSPTMKKEYGGCAGNIAYNLKLLNGN---PLIVSI 69 (312)
Q Consensus 3 i~~~G~~~~D~~~~~~~~~~~--~~~~~~--------~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~---~~~~~~ 69 (312)
|+++||+.+|++..+++.|-. .+..+. .+...........+..+||++.|+|+++++||.+ +.|+|.
T Consensus 29 v~giGnalvDi~~~v~d~~l~~~~l~kg~m~l~~~~~~~~~~~~~~~~~~~~~~GGsa~N~a~~la~LG~~~~~~~fiG~ 108 (372)
T 3uq6_A 29 VFGMGNPLLDIIVDADDFMYRKYNLKKDNIVLAEEKHMTIYDEIQKKKKLNYIAGGATLNTVKMIQWIIQKPFVCSYVGC 108 (372)
T ss_dssp EEEEECCEEEEEEECCTHHHHHTTCCTTEEEECCGGGTTHHHHHHTSSSCEEEECCHHHHHHHHHHHHHCSTTSEEEEEE
T ss_pred EEEECCceeeEEEEeCHHHHHHcCCCCCceEEcCHHHHHHHHHHhccCCeEEeCCcHHHHHHHHHHHcCCCCCcEEEEee
Confidence 899999999999999865411 000111 1111111122334567899999999999999965 889999
Q ss_pred eecC--hHHHHHHHHHcCCccceeeecCCcccceEEEEEecCCCeeEEEeCCccccCCccccCC------cCCceEEEEC
Q psy8856 70 LGKD--GSSYLKHLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIFHPGAMQLSYDDNCIN------NADIKIAIIS 141 (312)
Q Consensus 70 vG~d--~~~i~~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 141 (312)
+|+| |+.+++.|++.||+++++...++.+|+.+++..+ +++|.+..+.++...++++++.. +..+++++++
T Consensus 109 VG~D~~G~~l~~~L~~~GV~~~~~~~~~~~~T~~~~v~~~-dgert~~~~~ga~~~l~~~~i~~~~~~~~i~~a~~~~~~ 187 (372)
T 3uq6_A 109 IGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAVLVS-EKLRSMVTYLGAACDLSLAHIEQPHVWSLVEKAQVYYIA 187 (372)
T ss_dssp ECSSHHHHHHHHHHHHTTCEECCEECCTTCCEEEEEEEEC-SSCEEEEEEEEGGGGCCHHHHTSHHHHHHHHHCSEEEEE
T ss_pred ecCCHHHHHHHHHHHHcCCCceeeeecCCCCceEEEEEcC-CCceEEEEeccchhhcchhhhhhhhHHHHhhcccEEEEe
Confidence 9999 8889999999999999988877778888888776 67888888888777777766653 4578899988
Q ss_pred CCC----hHHHHHHHHHHHhcCCcEEEcCCCCcc-cCCHHHHHHHhhcccEEEeCHHHHHHhhcCCCCC---HHH----H
Q psy8856 142 PDN----CCNMIKHIKKILKLKIPFIFDPGQSLS-MFTKEELIKIIKKSSYIIVNEYESKLLVSKTSLS---LQK----I 209 (312)
Q Consensus 142 ~~~----~~~~~~~~~~~~~~~~~v~~D~~~~~~-~~~~~~l~~ll~~~dvl~~n~~E~~~l~~~~~~~---~~~----l 209 (312)
+.. ++...++++.+++.+.++++|++.... .+..+.+.++++++|++++|++|++.+++..... .++ +
T Consensus 188 g~~~~~~~~~~~~~~~~a~~~g~~v~ldls~~~~~~~~~~~l~~ll~~~Dil~~Ne~Ea~~l~~~~~~~~~~~~~~a~~l 267 (372)
T 3uq6_A 188 GFVINTCYEGMLKIAKHSLENEKLFCFNLSAPFLSQFNTKEVDEMISYSNIVFGNESEAEAYGEVHGLLEDTVHATARYI 267 (372)
T ss_dssp GGGHHHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHCHHHHHHHHTTCSEEEEEHHHHHHHHHHTTCCSSHHHHHHHHH
T ss_pred cccccccHHHHHHHHHHHHHcCCeEeeccccchhhhhhHHHHHHHhhcCCcccCCHHHHHHHhCCCCCchhHHHHHHHHH
Confidence 653 466678888899999999999986322 2346778899999999999999999998765432 222 2
Q ss_pred h--------hcCCEEEEeeCCCceEEEecCC-c--eEEcCCcccCCcCCCCCchhhhHHHHHHHHHcCCCHHHHHHHHHH
Q psy8856 210 N--------EQVKVLIVTRGELGSDIFLNNE-R--KIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSSL 278 (312)
Q Consensus 210 ~--------~g~~~vvvt~G~~G~~~~~~~~-~--~~~~~~~~~~~~vdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~a 278 (312)
. ++.+.++||+|++|+++++.++ + .+.+++.+..++||||||||+|.|||+|++.+|+++++|+++|++
T Consensus 268 ~~~~~~~~~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~v~~~~~~~vVDTtGAGDaF~agfl~~l~~g~~l~~a~~~a~~ 347 (372)
T 3uq6_A 268 ADLPFADGKKRKRLVIITRGKNPLLYTDSSDSEIHQFMVEQFKDDQIIDTNGAGDAFAAGFIADYIRGKPMITSLHAAVK 347 (372)
T ss_dssp HHSCCTTCCCCCCEEEEEETTEEEEEEESSCSSCEEECCCCCCGGGCCCCTTHHHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred hhhhhhhhcCCceEEEEcCCCCceEEecCCCceeeeeeccCCCCCceeCCCchHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 1 2578899999999999987622 2 344555555569999999999999999999999999999999999
Q ss_pred HhchheeeccCCCCCCChHHHHHHHH
Q psy8856 279 MGSTEISHQGGQKHCPSLSEIDQRFK 304 (312)
Q Consensus 279 ~aa~~~~~~g~~~~~~~~~ev~~~~~ 304 (312)
+|+.+|++.|+. +|++++++-+++
T Consensus 348 aAa~vv~~~Ga~--lp~r~~~~lkln 371 (372)
T 3uq6_A 348 AAAYIICRSGFS--LGSRDSYSLKIN 371 (372)
T ss_dssp HHHHHHTSSSSC--CCCGGGCC----
T ss_pred HHHHHHcCCCCC--CCChhHHHHHhc
Confidence 999999999997 788887765443
No 33
>2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A*
Probab=100.00 E-value=5.8e-42 Score=304.19 Aligned_cols=279 Identities=14% Similarity=0.172 Sum_probs=228.0
Q ss_pred CcEeeecceeeeeEEecCCcccCCCCccccccceeeeecCCcccccCCchHHHHHHHHHhCCCceEEEEeecC-hHHHHH
Q psy8856 1 MNSLICGSLAFDNIMRFEGKFSNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLLNGNPLIVSILGKD-GSSYLK 79 (312)
Q Consensus 1 m~i~~~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~~~~~~~vG~d-~~~i~~ 79 (312)
|+|+++|++++|++..++ ++ . + +.+.+.......+||++.|+|.+|++||.++.++|.+|++ |+.+++
T Consensus 3 m~i~v~g~~~~D~~~~v~-~~-~---~------g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~vG~~~G~~i~~ 71 (323)
T 2f02_A 3 LIVTVTMNPSIDISYLLD-HL-K---L------DTVNRTSQVTKTPGGKGLNVTRVIHDLGGDVIATGVLGGFHGAFIAN 71 (323)
T ss_dssp CEEEEESSCEEEEEEECS-CC-C---T------TSEEEESCEEEEEESHHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHH
T ss_pred eEEEEecCceeEEEEecC-Cc-c---c------CCEEEeceEEEcCCcHHHHHHHHHHHcCCCeEEEEEeccchHHHHHH
Confidence 789999999999999998 53 2 2 3344556678889999999999999999999999999987 889999
Q ss_pred HHHHcCCccceeeecCCcccceEEEEEecCCCeeEEEeCCccccCCccccC--------CcCCceEEEECCCC-----hH
Q psy8856 80 HLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIFHPGAMQLSYDDNCI--------NNADIKIAIISPDN-----CC 146 (312)
Q Consensus 80 ~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~-----~~ 146 (312)
.|++.||+++++...+ .|++++.+++++ +++....+++ .++++++. .+..++++++++.. .+
T Consensus 72 ~L~~~gV~~~~v~~~~--~t~~~~~~~~~~-~~~~~~~~g~--~l~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~ 146 (323)
T 2f02_A 72 ELKKANIPQAFTSIKE--ETRDSIAILHEG-NQTEILEAGP--TVSPEEISNFLENFDQLIKQAEIVTISGSLAKGLPSD 146 (323)
T ss_dssp HHHHTTCCBCCEEESS--CCEEEEEEEETT-EEEEEEECCC--BCCHHHHHHHHHHHHHHHTTCSEEEEESCCCBTSCTT
T ss_pred HHHHCCCceeEEEcCC--CCeeEEEEEcCC-CeEEEECCCC--CCCHHHHHHHHHHHHHhccCCCEEEEECCCCCCCChH
Confidence 9999999999887644 466666667765 5555444443 24433322 13678899887543 36
Q ss_pred HHHHHHHHHHhcCCcEEEcCCCCcccCCHHHHHHHhh---cccEEEeCHHHHHHhhcCCCC-----CHHH----Hh-hcC
Q psy8856 147 NMIKHIKKILKLKIPFIFDPGQSLSMFTKEELIKIIK---KSSYIIVNEYESKLLVSKTSL-----SLQK----IN-EQV 213 (312)
Q Consensus 147 ~~~~~~~~~~~~~~~v~~D~~~~~~~~~~~~l~~ll~---~~dvl~~n~~E~~~l~~~~~~-----~~~~----l~-~g~ 213 (312)
.+.++++.+++.+.++++||+. ..+.++++ ++|++++|++|++.+++.... +..+ +. .|+
T Consensus 147 ~~~~~~~~a~~~g~~v~~Dp~~-------~~~~~~l~~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~~l~~~g~ 219 (323)
T 2f02_A 147 FYQELVQKAHAQEVKVLLDTSG-------DSLRQVLQGPWKPYLIKPNLEELEGLLGQDFSENPLAAVQTALTKPMFAGI 219 (323)
T ss_dssp HHHHHHHHHHHTTCEEEEECCT-------HHHHHHHHSSCCCSEECCBHHHHHHHHTCCCCSSCHHHHHHHHTSGGGTTC
T ss_pred HHHHHHHHHHHCCCEEEEECCh-------HHHHHHHhccCCCeEEecCHHHHHHHhCCCCCCCcHHHHHHHHHHHHHcCC
Confidence 7788899999999999999974 23556664 899999999999999986522 1212 22 278
Q ss_pred CEEEEeeCCCceEEEecCCceEEcCCcccCCcCCCCCchhhhHHHHHHHHHcCCCHHHHHHHHHHHhchheeeccCCCCC
Q psy8856 214 KVLIVTRGELGSDIFLNNERKIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSSLMGSTEISHQGGQKHC 293 (312)
Q Consensus 214 ~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~a~aa~~~~~~g~~~~~ 293 (312)
+.++||+|++|++++++ ++.+++|+++++ ++||+||||+|.|||++++++|+++++|+++|+++|+.++++.|+. .
T Consensus 220 ~~vvvt~G~~G~~~~~~-~~~~~~~~~~v~-vvdttGAGDaF~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~~G~~--~ 295 (323)
T 2f02_A 220 EWIVISLGKDGAIAKHH-DQFYRVKIPTIQ-AKNPVGSGDATIAGLAYGLAKDAPAAELLKWGMAAGMANAQERMTG--H 295 (323)
T ss_dssp SEEEEECGGGCEEEEET-TEEEEEECCCCC-CSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHSSSSS--C
T ss_pred CEEEEeecCCceEEEeC-CCEEEEcCCCcc-ccCCccHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCCCcC--C
Confidence 99999999999999988 888899999986 9999999999999999999999999999999999999999999986 7
Q ss_pred CChHHHHHHHHHh
Q psy8856 294 PSLSEIDQRFKEA 306 (312)
Q Consensus 294 ~~~~ev~~~~~~~ 306 (312)
|+.+|+++++++.
T Consensus 296 ~~~~ev~~~~~~~ 308 (323)
T 2f02_A 296 VDVENVKKHLMNI 308 (323)
T ss_dssp CCHHHHHHHHTTC
T ss_pred CCHHHHHHHhhcE
Confidence 9999999998764
No 34
>4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601}
Probab=100.00 E-value=1.5e-42 Score=311.55 Aligned_cols=289 Identities=15% Similarity=0.159 Sum_probs=221.4
Q ss_pred cEeeecceeeeeEEecCCcccCCCCccccccceeeeecCCcccccCCchHHHHHHHHHhCCCceEEEEeecC--hHHHHH
Q psy8856 2 NSLICGSLAFDNIMRFEGKFSNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLLNGNPLIVSILGKD--GSSYLK 79 (312)
Q Consensus 2 ~i~~~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~~~~~~~vG~d--~~~i~~ 79 (312)
||+++|++++|.....+..+ .....+...+||++.|+|.+|++||.++.++|.+|+| |+.+++
T Consensus 26 kv~~~GE~m~~l~p~~~~~~---------------~~~~~~~~~~GG~~aNvA~~larLG~~~~~ig~vG~D~~G~~l~~ 90 (351)
T 4gm6_A 26 QVVTIGELLMRLSTQQGIPF---------------SQTTALDIHIGGAEANVAVNLSKLGHPTRIATVVPANPIGKMAVE 90 (351)
T ss_dssp EEEEECCCEEEEECCTTCCG---------------GGCSEEEEEEECHHHHHHHHHHHTTCCEEEEEEECSSHHHHHHHH
T ss_pred CEEEEcceeEEecCCCCCCc---------------cccCeEEEecCChHHHHHHHHHHcCCCeEEEEEeCCCHHHHHHHH
Confidence 69999999999763322111 1234557889999999999999999999999999999 889999
Q ss_pred HHHHcCCccceeeecCCcccceEEEEEecCCCeeEEEeCCcc--ccCCccccC---CcCCceEEEECCC-------ChHH
Q psy8856 80 HLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIFHPGAM--QLSYDDNCI---NNADIKIAIISPD-------NCCN 147 (312)
Q Consensus 80 ~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~---~~~~~~~~~~~~~-------~~~~ 147 (312)
.|+++||+++++...++.+|..++...+..+++.+..+.... ......++. .+++++++++++. ..+.
T Consensus 91 ~L~~~GVdt~~v~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~d~~~~~~~~~~~~~~~~g~~l~~~~~~~~~ 170 (351)
T 4gm6_A 91 HLWRHQVDTAFVVEAGDRLGTYYLESGTALKAPSVVYDRQHSSFARHKSMDWDLSELLKGIRVLHVSGITIALSTFWLEM 170 (351)
T ss_dssp HHHHTTEECTTEEECSSCCCEEEEECCBTTBCCEEEEECTTCHHHHCCCCCCCHHHHHTTEEEEEEEHHHHHHCHHHHHH
T ss_pred HHHHcCCCcccccccCCccceeEEEEccCCcceEEEEccccchhhhCCccccCHHHHHhhcccceecccchhhchhHHHH
Confidence 999999999999887765555544444555555554443321 112222221 2568899988742 2467
Q ss_pred HHHHHHHHHhcCCcEEEcCCCCcccCCHH----HHHHHhhcccEEEeCHHHHHHhhcCCCCCH---HHHhh---------
Q psy8856 148 MIKHIKKILKLKIPFIFDPGQSLSMFTKE----ELIKIIKKSSYIIVNEYESKLLVSKTSLSL---QKINE--------- 211 (312)
Q Consensus 148 ~~~~~~~~~~~~~~v~~D~~~~~~~~~~~----~l~~ll~~~dvl~~n~~E~~~l~~~~~~~~---~~l~~--------- 211 (312)
+.++++.+++.|++++|||++++.+|..+ .+.++++++|++++|++|++.+++...... +.+.+
T Consensus 171 ~~~~~~~ak~~g~~v~~D~n~r~~lw~~~~~~~~~~~~l~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~~~~~~~~~~~ 250 (351)
T 4gm6_A 171 VVKIIREAKRNGIKISFDMNYRAKLWELEAAKRAYQQLLPLVDYCSAGQMDAVAFFEISSETTDYYQAMHDKYPNIELFY 250 (351)
T ss_dssp HHHHHHHHHHTTCEEEEECCCCTTTSCHHHHHHHHHHHGGGCSEEECCHHHHHHTSCCCTTCSCHHHHHHHHCTTCCEEE
T ss_pred HHHHHHHHHHcCCCcccCCCcCchhhhhhhHHHHHHHHHHhCCccccCHHHHHHHhCCCCchhHHHHHHHhhhhhhhhhh
Confidence 78889999999999999999999999754 366788999999999999999998654321 22211
Q ss_pred cCCEEEEeeC--CCceEEEecCCceEEcCCcccCCcCCCCCchhhhHHHHHHHHHcCCCHHHHHHHHHHHhchheeeccC
Q psy8856 212 QVKVLIVTRG--ELGSDIFLNNERKIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSSLMGSTEISHQGG 289 (312)
Q Consensus 212 g~~~vvvt~G--~~G~~~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~a~aa~~~~~~g~ 289 (312)
+.+..+++.+ ..++.++++ ++.++.|++++.+++||+||||+|+|||++++++|+++++|+++|+++||++|++.|+
T Consensus 251 ~~~~~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~VvDttGAGDaF~ag~l~~l~~g~~~~~al~~A~aaaal~v~~~Ga 329 (351)
T 4gm6_A 251 ATKRTVISASHHLLQGHLWTQ-GECWESEEYAIYPIVDRVGGGDAYTAAVLHGILSEWRPDETVKFATAAAGLKHSIHGD 329 (351)
T ss_dssp EEEEEEEETTEEEEEEEEEET-TEEEEEEEEEECSCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTSSSS
T ss_pred ccccceeeeccCCceEEEEeC-CceEEeCCCCCCCcCCCCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHhCCCCC
Confidence 2334455544 446677888 8888888888766999999999999999999999999999999999999999999999
Q ss_pred CCCCCChHHHHHHHHHhh
Q psy8856 290 QKHCPSLSEIDQRFKEAF 307 (312)
Q Consensus 290 ~~~~~~~~ev~~~~~~~~ 307 (312)
.... +.+|+++++.+..
T Consensus 330 ~~~~-~~~ev~~~l~~~~ 346 (351)
T 4gm6_A 330 INPF-DEKTIADFAADKS 346 (351)
T ss_dssp SCCC-CHHHHHHHHHC--
T ss_pred CCCC-CHHHHHHHHhCCC
Confidence 8754 5689999997643
No 35
>3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum}
Probab=100.00 E-value=2.5e-42 Score=305.18 Aligned_cols=284 Identities=24% Similarity=0.264 Sum_probs=224.3
Q ss_pred CcEeeecceeeeeEEecCCcccCCCCccccccceeeeecCCcccccCCchHHHHHHHHHhCC-CceEEEEeecC-hHHHH
Q psy8856 1 MNSLICGSLAFDNIMRFEGKFSNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLLNG-NPLIVSILGKD-GSSYL 78 (312)
Q Consensus 1 m~i~~~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~-~~~~~~~vG~d-~~~i~ 78 (312)
|||+++|+.++|.+....+ .....+||++.|+|.++++||. ++.++|.+|+| |..++
T Consensus 3 ~~ilviG~~~iD~~~~~~~---------------------~~~~~~GG~~~NvA~~la~LG~~~~~~ig~vG~D~g~~~~ 61 (313)
T 3kd6_A 3 LSLLVIGSLAFDDIETPFG---------------------RSDNTLGGSSTYIALSASYFTDEPIRMVGVVGSDFGKEHF 61 (313)
T ss_dssp CCEEEESCCEEEEEECSSC---------------------EEEEEEECHHHHHHHHHTTTCSSCEEEEEEEETTSCHHHH
T ss_pred ccEEEEeEEEEeeecCCCC---------------------cccccCCCHHHHHHHHHHHhCCCceEEEEecCCCcHHHHH
Confidence 7899999999999954331 1267789999999999999999 99999999999 88999
Q ss_pred HHHHHcCCccceeeecCCcccceEEEE--EecCCCeeEEEeCCccccCCccccCCcCCceEEEECCCChHHHHHHHHHHH
Q psy8856 79 KHLKYLGISNKYIQKINSMFTAQCFIV--TDVNNNQITIFHPGAMQLSYDDNCINNADIKIAIISPDNCCNMIKHIKKIL 156 (312)
Q Consensus 79 ~~l~~~gi~~~~~~~~~~~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (312)
+.|+++||+++++.+.++.+|....-. .+.++++.+....+....+.+.....++++++++++...++...++++.+
T Consensus 62 ~~L~~~gVd~~~v~~~~~~~T~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~- 140 (313)
T 3kd6_A 62 DLLHAKNIDTRGIQVIEDGKTFRWAGRYHYDMNTRDTLDTQLNVFAEFDPHVPQYYRDSKFVCLGNIDPELQLKVLDQI- 140 (313)
T ss_dssp HHHHHTTEEEEEEEEETTCCCEEEEEEECTTSSCEEEEEEECGGGTTCCCCCCGGGTTCSEEEECSSCHHHHHHHHTTC-
T ss_pred HHHHHcCCCccceEEcCCCCeeeeeeeeeccccccceeecccchHhhcCccchHHHccCCEEEEcCCCHHHHHHHHHHH-
Confidence 999999999999988776666332111 22233344444444433444333334678999999877777667777766
Q ss_pred hcCCcEEEcCCCCcccCCHHHHHHHhhcccEEEeCHHHHHHhhcCCCCC--HHHHhh-cCCEEEEeeCCCceEEEecCCc
Q psy8856 157 KLKIPFIFDPGQSLSMFTKEELIKIIKKSSYIIVNEYESKLLVSKTSLS--LQKINE-QVKVLIVTRGELGSDIFLNNER 233 (312)
Q Consensus 157 ~~~~~v~~D~~~~~~~~~~~~l~~ll~~~dvl~~n~~E~~~l~~~~~~~--~~~l~~-g~~~vvvt~G~~G~~~~~~~~~ 233 (312)
+.+.++++||.........+.+.++++++|++++|++|++.|++..+.. .+.+.+ +++.++||+|++|++++++ ++
T Consensus 141 ~~~~~v~~Dp~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~-~~ 219 (313)
T 3kd6_A 141 DDPKLVVCDTMNFWIEGKPEELKKVLARVDVFIVNDSEARLLSGDPNLVKTARIIREMGPKTLIIKKGEHGALLFTD-NG 219 (313)
T ss_dssp SSCSEEEEECCHHHHHHCHHHHHHHHTTCSEEEEEHHHHHHHHSCSCHHHHHHHHHTTSCSEEEEECTTSCEEEEET-TE
T ss_pred hhCCEEEEcChhhhhhhhHHHHHHHHhcCCEEEeCHHHHHHHhCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEC-Cc
Confidence 5688899999421111135667889999999999999999999865321 233443 8999999999999999998 88
Q ss_pred eEEcCCcccCCcCCCCCchhhhHHHHHHHHHcCC-----CHHHHHHHHHHHhchheeeccCCCC-CCChHHHHHHHHHhh
Q psy8856 234 KIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNL-----DWYTTGRLSSLMGSTEISHQGGQKH-CPSLSEIDQRFKEAF 307 (312)
Q Consensus 234 ~~~~~~~~~~~~vdt~GaGDaf~ag~~~~l~~g~-----~~~~a~~~a~a~aa~~~~~~g~~~~-~~~~~ev~~~~~~~~ 307 (312)
.+++|++++++++||+||||+|.|||++++.+|. ++++|+++|+++|+++|++.|+... .++++|+++++++..
T Consensus 220 ~~~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~~~l~~a~~~a~~~aa~~v~~~G~~~~~~~~~~ev~~~l~~~~ 299 (313)
T 3kd6_A 220 IFAAPAFPLESIYDPTGAGDTFAGGFIGHLARCGNTSEAEMRKAVLYGSAMASFCVEQFGPYRYNDLDLLEVDDRYQSFL 299 (313)
T ss_dssp EEEECCCTTCCCSCCTTHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHTTSSTTGGGGTCCHHHHHHHHHHHH
T ss_pred eEEeCCCCCCCcCCCCCccHHHHHHHHHHHHcCCCccccCHHHHHHHHHHHHHHHHeecCCCCCCCCCHHHHHHHHHHHH
Confidence 9999999884499999999999999999999998 8999999999999999999999752 489999999987753
No 36
>3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A*
Probab=100.00 E-value=9.7e-43 Score=312.21 Aligned_cols=291 Identities=15% Similarity=0.203 Sum_probs=230.5
Q ss_pred CcEeeecceeeeeEEecCCccc--------CCCC--ccccccceeeeecCCcccccCCchHHHHHHHHHh----CCC-ce
Q psy8856 1 MNSLICGSLAFDNIMRFEGKFS--------NSLL--PDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLL----NGN-PL 65 (312)
Q Consensus 1 m~i~~~G~~~~D~~~~~~~~~~--------~~~~--~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l----G~~-~~ 65 (312)
++|+++|++++|++..+++.|- ...+ ....+..+...+.......+||++.|+|.++++| |.+ +.
T Consensus 8 ~~v~~iG~~~lD~~~~v~~~~l~~~~l~~g~~~l~~~~~~p~~~~~~~~~~~~~~~GG~~~N~a~~la~L~~~~G~~~~~ 87 (347)
T 3otx_A 8 LRVYVQCNPLLDVSAHVSDEFLVKYGLERGTAILLSERQKGIFDDIEKMPNVRYVPGGSGLNVARVAQWMQQAYKGKFVT 87 (347)
T ss_dssp CCEEEECCCEEEEEEECCHHHHHHTTCCTTCEEECCGGGTTHHHHHHTSTTCEEEECCHHHHHHHHHHHTTGGGTTSSEE
T ss_pred CcEEEECCceeeEEEecCHHHHHHcCCCCCceEEcCHHHHHHHHHHhccCCeEEecCCHHHHHHHHHHHhcccCCCCeEE
Confidence 4799999999999999984220 0000 1112223334444566789999999999999999 999 99
Q ss_pred EEEEeecC--hHHHHHHHHHcCCccceeeecCCcccceEEEEEecCCCeeEEEeCCccccCCccccCC------cCCceE
Q psy8856 66 IVSILGKD--GSSYLKHLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIFHPGAMQLSYDDNCIN------NADIKI 137 (312)
Q Consensus 66 ~~~~vG~d--~~~i~~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 137 (312)
++|.+|+| |+.+++.|++.||+++++. .++.+|+.+++.++ ++++.+..+.++...++++++.. ++++++
T Consensus 88 ~ig~vG~D~~g~~~~~~l~~~GV~~~~~~-~~~~~T~~~~i~~~-~g~r~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~~ 165 (347)
T 3otx_A 88 YVGCIADDRYGKVLKEAAEHEGIVMAVEH-TTKAGSGACAVCIT-GKERTLVADLGAANHLSSEHMRSPAVVRAMDESRI 165 (347)
T ss_dssp EECEECSSHHHHHHHHHHHHHTCEECCEE-CSSSCEEEEEEEEE-TTEEEEEEEEEGGGGCCHHHHTSHHHHHHHHHCSE
T ss_pred EEEEecCChHHHHHHHHHHHCCCceeccc-CCCCCCeEEEEEEE-CCceeeeechhhhhcCCHHHcCchhhHHHHhhCCE
Confidence 99999999 8889999999999999875 46678999999888 78887777777766666666543 467899
Q ss_pred EEECCC----ChHHHHHHHHHHHhcCCcEEEcCCCCc-ccCCHHHHHHHhhcccEEEeCHHHHHHhhcCCC---CCH---
Q psy8856 138 AIISPD----NCCNMIKHIKKILKLKIPFIFDPGQSL-SMFTKEELIKIIKKSSYIIVNEYESKLLVSKTS---LSL--- 206 (312)
Q Consensus 138 ~~~~~~----~~~~~~~~~~~~~~~~~~v~~D~~~~~-~~~~~~~l~~ll~~~dvl~~n~~E~~~l~~~~~---~~~--- 206 (312)
+++++. .++.+.++++.+++.+.++++|+.... .....+.+.++++++|++++|++|++.+++... .+.
T Consensus 166 ~~~~g~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~l~~~l~~~dil~~N~~Ea~~l~~~~~~~~~~~~~~ 245 (347)
T 3otx_A 166 FYFSGFTLTVDVNHVLQACRKAREVDGLFMINLSAPFIMQFFSAQLGEVLPYTDIIVANRHEAKEFANMMKWDTDCVEEI 245 (347)
T ss_dssp EEEEGGGGGTCHHHHHHHHHHHHHTTCEEEEECCCHHHHHHCHHHHHHHGGGCSEEEEEHHHHHHHHHHHTCCCCCHHHH
T ss_pred EEEeeeecccCHHHHHHHHHHHHHhCCEEEeeCchhhhHHHHHHHHHHHHhhCCEEecCHHHHHHHhcccCCCcCCHHHH
Confidence 999753 457888999999999999999997421 111246688999999999999999999987522 232
Q ss_pred -HHHh-------hcCCEEEEeeCCCceEEEecCCceEEcCCcccC--CcCCCCCchhhhHHHHHHHHHcCCCHHHHHHHH
Q psy8856 207 -QKIN-------EQVKVLIVTRGELGSDIFLNNERKIKIPCVKAD--RIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLS 276 (312)
Q Consensus 207 -~~l~-------~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~--~~vdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a 276 (312)
+.+. .+++.++||+|++|++++++ ++.+++|++++. +++||+||||+|.|||++++.+|+++++|+++|
T Consensus 246 ~~~l~~~~~~~~~g~~~vvvT~G~~Ga~~~~~-~~~~~~~~~~~~~~~vvDttGAGDaF~ag~l~~l~~g~~l~~a~~~a 324 (347)
T 3otx_A 246 ARRAVSEVPYTGTKGRVVVFTRDIESTVLATK-DGVETVPVPQLDQDKVIDMNGAGDAFMGGFLSAYAVGKDLRRCCETG 324 (347)
T ss_dssp HHHHHHTSCCCCSSCCEEEEEETTEEEEEEET-TEEEEECCCCCCGGGCCSSCCSHHHHHHHHHHHHTTTCCHHHHHHHH
T ss_pred HHHHHhhhccccCCCCEEEEEeCCCCeEEEEC-CeEEEEEecccCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 3344 48899999999999999998 888899988762 489999999999999999999999999999999
Q ss_pred HHHhchheeeccCCCCCCCh
Q psy8856 277 SLMGSTEISHQGGQKHCPSL 296 (312)
Q Consensus 277 ~a~aa~~~~~~g~~~~~~~~ 296 (312)
+++|+.+|++.|+. .|+.
T Consensus 325 ~~~aa~~v~~~G~~--~p~~ 342 (347)
T 3otx_A 325 HYTAQEVIQRDGCS--FPEK 342 (347)
T ss_dssp HHHHHHHHTCC------CCS
T ss_pred HHHHHHHHcccCCC--CCCC
Confidence 99999999999977 4543
No 37
>3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri}
Probab=100.00 E-value=1.3e-42 Score=307.79 Aligned_cols=270 Identities=15% Similarity=0.213 Sum_probs=218.3
Q ss_pred cEeeecceeeeeEEecCCcccCCCCccccccceeeeecCCcccccCCchHHHHHHHHHhC----CCceEEEEeecC--hH
Q psy8856 2 NSLICGSLAFDNIMRFEGKFSNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLLN----GNPLIVSILGKD--GS 75 (312)
Q Consensus 2 ~i~~~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG----~~~~~~~~vG~d--~~ 75 (312)
+|+++|++++|++.... .+...+||++.|+|.+|++|| .++.++|.+|+| |+
T Consensus 6 ~i~viG~~~~D~~~~~~----------------------~~~~~~GG~~~NvA~~la~LG~~~~~~~~~ig~vG~D~~G~ 63 (319)
T 3lhx_A 6 KIAVIGECMIELSEKGA----------------------DVKRGFGGDTLNTSVYIARQVDPAALTVHYVTALGTDSFSQ 63 (319)
T ss_dssp EEEEESCCEEEEEC-------------------------CCEEEEECHHHHHHHHHHTTSCTTTEEEEEECEECSSHHHH
T ss_pred ceeeechhhhhhccCCC----------------------ceEEecCChHHHHHHHHHHcCCCCCCcEEEEEEeCCCHHHH
Confidence 69999999999974432 236778999999999999999 899999999999 78
Q ss_pred HHHHHHHHcCCccceeeecCCcccceEEEEEecCCCeeEEEeCCcc---ccCCccccC----CcCCceEEEECCC-----
Q psy8856 76 SYLKHLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIFHPGAM---QLSYDDNCI----NNADIKIAIISPD----- 143 (312)
Q Consensus 76 ~i~~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~----~~~~~~~~~~~~~----- 143 (312)
.+++.|++.||+++++.+.++.+|+.+++.+++++++.+..+++.. ..++..++. .+..++++++++.
T Consensus 64 ~l~~~L~~~GV~~~~v~~~~~~~T~~~~i~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~g~~~~~l 143 (319)
T 3lhx_A 64 QMLDAWHGENVDTSLTQRMENRLPGLYYIETDSTGERTFYYWRNEAAAKFWLASEQSAAICEELANFDYLYLSGISLAIL 143 (319)
T ss_dssp HHHHHHHTTTEECTTCEECTTCCCCEEEEEC----CCEEEEECTTCGGGGTTSSSSHHHHHHHHTTCSEEEEEHHHHHTS
T ss_pred HHHHHHHHcCCCcceEEEcCCCCceEEEEEeCCCCCeeEEEecCCCHHHhccCccchhhHHHHhcCCCEEEEcCchhhhc
Confidence 8999999999999999887778999999999888888877776532 223333322 2578899999742
Q ss_pred ---ChHHHHHHHHHHHhcCCcEEEcCCCCcccCC-----HHHHHHHhhcccEEEeCHHHHHHhhcCCCCC--HHHHhh-c
Q psy8856 144 ---NCCNMIKHIKKILKLKIPFIFDPGQSLSMFT-----KEELIKIIKKSSYIIVNEYESKLLVSKTSLS--LQKINE-Q 212 (312)
Q Consensus 144 ---~~~~~~~~~~~~~~~~~~v~~D~~~~~~~~~-----~~~l~~ll~~~dvl~~n~~E~~~l~~~~~~~--~~~l~~-g 212 (312)
..+.+.++++.+++.+.++++||+++...|. .+.+.++++++|++++|++|++.+++..+.. .+.+.+ +
T Consensus 144 ~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~di~~~n~~E~~~l~g~~~~~~~~~~l~~~g 223 (319)
T 3lhx_A 144 SPTSREKLLSLLRECRAKGGKVIFDNNYRPRLWASKEETQQVYQQMLECTDIAFLTLDDEDALWGQQPVEDVIARTHNAG 223 (319)
T ss_dssp CHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSCHHHHHHHHHHHHTTCSEEEEEHHHHHHHHCCCCHHHHHHHHHHTT
T ss_pred CchhHHHHHHHHHHHHhcCCEEEEeCcCCcccccCHHHHHHHHHHHHhhCCcccCCHHHHHHHhCCCCHHHHHHHHHhcC
Confidence 2357788889999999999999998776664 2456789999999999999999999875321 123433 8
Q ss_pred CCEEEEeeCCCceEEEecCCceE-EcCCc---ccCCcCCCCCchhhhHHHHHHHHHcCCCHHHHHHHHHHHhchheeecc
Q psy8856 213 VKVLIVTRGELGSDIFLNNERKI-KIPCV---KADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSSLMGSTEISHQG 288 (312)
Q Consensus 213 ~~~vvvt~G~~G~~~~~~~~~~~-~~~~~---~~~~~vdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~a~aa~~~~~~g 288 (312)
++.++||.|++|++++++ ++.+ ++|++ +++ ++||+||||+|.|||++++++|+++++|+++|+++|+.++++.|
T Consensus 224 ~~~vvvt~G~~G~~~~~~-~~~~~~~~~~~~~~~~-vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~~G 301 (319)
T 3lhx_A 224 VKEVVVKRGADSCLVSIA-GEALVDVPAVKLPKEK-VIDTTAAGDSFSAGYLAVRLTGGSAENAAKRGHLTASTVIQYRG 301 (319)
T ss_dssp CSEEEEEETTEEEEEEET-TSCCEEECCCCCCGGG-CCCCTTHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHTTSSS
T ss_pred CCEEEEEECCCCeEEEEC-CcceEEcccccCCCCc-cCCCCCccHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhccCC
Confidence 999999999999999988 6554 88886 454 89999999999999999999999999999999999999999999
Q ss_pred CCCCCCChH
Q psy8856 289 GQKHCPSLS 297 (312)
Q Consensus 289 ~~~~~~~~~ 297 (312)
+. .|+..
T Consensus 302 a~--~~~~~ 308 (319)
T 3lhx_A 302 AI--IPREA 308 (319)
T ss_dssp SS--CCGGG
T ss_pred Cc--CCCCC
Confidence 98 44443
No 38
>3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae}
Probab=100.00 E-value=6.9e-43 Score=315.07 Aligned_cols=290 Identities=15% Similarity=0.160 Sum_probs=227.4
Q ss_pred cEeeecceeeeeEEecCCcc-----cC---CCCccc--cccceeeeecCCcccccCCchHHHHHHHHHh---CCCceEEE
Q psy8856 2 NSLICGSLAFDNIMRFEGKF-----SN---SLLPDQ--LDKINVSFYSPTMKKEYGGCAGNIAYNLKLL---NGNPLIVS 68 (312)
Q Consensus 2 ~i~~~G~~~~D~~~~~~~~~-----~~---~~~~~~--~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l---G~~~~~~~ 68 (312)
+|+++|++++|++..+++.| +. ..++++ .+..+...........+||++.|+|.++++| |.++.++|
T Consensus 25 ~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~l~~~~~~p~~~e~~~~~~~~~~~GG~~~N~a~~~~~L~~lG~~~~~ig 104 (365)
T 3loo_A 25 MLVGLGNPLLDISAVVEKDLLNKYDMQPNNAILAEEKHMPMYQELIEKYQAEYIAGGSVQNSLRVAQWILQRPRTAIFFG 104 (365)
T ss_dssp SEEEECCCEEEEEEECCHHHHHHTTCCSSEEEECCGGGTHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHTCTTSEEEEE
T ss_pred cEEEECCCeEeEEEecCHHHHHHcCCCCCCceechhHHHHHHHHHhhcCCeEEecCCHHHHHHHHHHHhhcCCCcEEEEE
Confidence 49999999999999998432 00 000111 1111222222345678999999999999987 99999999
Q ss_pred EeecC--hHHHHHHHHHcCCccceeeecCCcccceEEEEEecCCCeeEEEeCCccccCCccccCC------cCCceEEEE
Q psy8856 69 ILGKD--GSSYLKHLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIFHPGAMQLSYDDNCIN------NADIKIAII 140 (312)
Q Consensus 69 ~vG~d--~~~i~~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 140 (312)
.+|+| |+.+++.|++.||+++++.. ++.+|+++++.++ ++++.+..+.++...++++++.. +.+++++++
T Consensus 105 ~vG~D~~g~~~~~~l~~~GV~~~~~~~-~~~~Tg~~~i~~~-~~~r~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~~v~i 182 (365)
T 3loo_A 105 CVGQDEYARILEERATSNGVNVQYQRS-ATSPTGTCAVLVT-GTQRSLCANLAAANDFTPEHLRSDGNRAYLQGAQFFYV 182 (365)
T ss_dssp EEESBHHHHHHHHHHHHHTCEEEEEEE-SSSCCEEEEEEEE-TTEEEEEEECGGGGGCCGGGGGSHHHHHHHHHCSEEEE
T ss_pred EecCCchHHHHHHHHHHCCCceecccc-CCCCCeEEEEEEE-CCceEEEeccchHhhCCHhHcCchhhHHHHhhCCEEEE
Confidence 99999 78899999999999999877 6679999999998 67787777777777777766653 467899999
Q ss_pred CCCC----hHHHHHHHHHHHhcCCcEEEcCCCCc-ccCCHHHHHHHhhcccEEEeCHHHHHHhhcCCC---CCHH----H
Q psy8856 141 SPDN----CCNMIKHIKKILKLKIPFIFDPGQSL-SMFTKEELIKIIKKSSYIIVNEYESKLLVSKTS---LSLQ----K 208 (312)
Q Consensus 141 ~~~~----~~~~~~~~~~~~~~~~~v~~D~~~~~-~~~~~~~l~~ll~~~dvl~~n~~E~~~l~~~~~---~~~~----~ 208 (312)
++.. ++.+.++++.+++.++++++|+.... .....+.+.++++++|++++|++|++.+++... .+.+ .
T Consensus 183 ~G~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~l~~~l~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~~~ 262 (365)
T 3loo_A 183 SGFFFTVSFESALSVAKEAAATGRMFMMNLSAPFVPQFYKNNLEEIFPYVDVLFGNETEAIALAKEFNYGTEDLREIGKR 262 (365)
T ss_dssp EGGGHHHHHHHHHHHHHHHHHTTCEEEEECCSTHHHHHCHHHHHHHGGGCSEEEEEHHHHHHHHHHTTCCCCCHHHHHHH
T ss_pred eeeeccCCHHHHHHHHHHHHHcCCEEEEECCchhhhHHHHHHHHHHHHhCCEEecCHHHHHHHhcccCCCCCCHHHHHHH
Confidence 8643 46778888889999999999996432 122356788999999999999999999987532 2332 3
Q ss_pred Hhh-------cCCEEEEeeCCCceEEE--ecCCceEEcCCccc--CCcCCCCCchhhhHHHHHHHHHcCCCHHHHHHHHH
Q psy8856 209 INE-------QVKVLIVTRGELGSDIF--LNNERKIKIPCVKA--DRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSS 277 (312)
Q Consensus 209 l~~-------g~~~vvvt~G~~G~~~~--~~~~~~~~~~~~~~--~~~vdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~ 277 (312)
+.+ +++.+|||+|++|++++ ++ ++.+++|++++ .+++||+||||+|.|||++++.+|+++++|+++|+
T Consensus 263 l~~~~~~~~~g~~~vvvT~G~~Ga~~~~~~~-~~~~~~~~~~v~~~~vvDttGAGDaF~agfl~~l~~g~~l~~a~~~a~ 341 (365)
T 3loo_A 263 IAALPKENGKRKRIVIITQGSDPVLLIEAGT-DNVREFPVQKLAPEQMVDTNGAGDAFVGGFLAQLLQSRTVDVCIKCGI 341 (365)
T ss_dssp HHTSCCSSTTSCCEEEEEETTEEEEEEETTC-SCCEEECCCCCC------CTTHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHhhhhhccCCCCEEEEEeCCCCEEEEEecC-CeEEEEeccccCCCCccCCCChHHHHHHHHHHHHHCCCCHHHHHHHHH
Confidence 332 78999999999999999 66 88889999987 24999999999999999999999999999999999
Q ss_pred HHhchheeeccCCCCCCCh
Q psy8856 278 LMGSTEISHQGGQKHCPSL 296 (312)
Q Consensus 278 a~aa~~~~~~g~~~~~~~~ 296 (312)
++|+.+|++.|+. +|+.
T Consensus 342 ~~Aa~~v~~~G~~--~p~~ 358 (365)
T 3loo_A 342 WAAREIIQRSGCT--FEGE 358 (365)
T ss_dssp HHHHHHHHHGGGG--GGSC
T ss_pred HHHHHHHcCCCCC--CCCC
Confidence 9999999999987 4444
No 39
>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A*
Probab=100.00 E-value=7.1e-42 Score=304.11 Aligned_cols=268 Identities=16% Similarity=0.219 Sum_probs=223.2
Q ss_pred CcEeeecceeeeeEEecCCcccCCCCccccccceeeeecCCcccccCCchHHHHHHHHHh--CCCceEEEEeecC--hHH
Q psy8856 1 MNSLICGSLAFDNIMRFEGKFSNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLL--NGNPLIVSILGKD--GSS 76 (312)
Q Consensus 1 m~i~~~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l--G~~~~~~~~vG~d--~~~ 76 (312)
|+|+++|++++|.+.... + ..+...+||++.|+|.+|++| |.++.++|.+|+| |+.
T Consensus 24 ~~i~viG~~~iD~~~~~~--------~------------~~~~~~~GG~~~NvA~~la~Lg~G~~~~~ig~vG~D~~G~~ 83 (328)
T 4e69_A 24 MHILSIGECMAELAPADL--------P------------GTYRLGFAGDTFNTAWYLARLRPESRISYFSAIGDDALSQQ 83 (328)
T ss_dssp CEEEEESCCEEEEEECSS--------T------------TEEEEEEECHHHHHHHHHHHHCTTSEEEEECEECSSHHHHH
T ss_pred CcEEEecCcEEEEecCCC--------C------------CceEEecCCHHHHHHHHHHhcCCCCcEEEEEeeCCCHHHHH
Confidence 579999999999986522 1 123677899999999999999 8999999999999 788
Q ss_pred HHHHHHHcCCccceeeecCCcccceEEEEEecCCCeeEEEeCCccc---cCCcccc--CCcCCceEEEECCC--------
Q psy8856 77 YLKHLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIFHPGAMQ---LSYDDNC--INNADIKIAIISPD-------- 143 (312)
Q Consensus 77 i~~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~--~~~~~~~~~~~~~~-------- 143 (312)
+++.|++.||+++++.+.++.+|+.+++.++ ++++.+..+++... .+...++ ..+..++++++++.
T Consensus 84 l~~~L~~~GV~~~~v~~~~~~~T~~~~v~~~-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~ 162 (328)
T 4e69_A 84 MRAAMSAAGIDGGGLRVIPGRTVGLYLITLE-QGERSFAYWRGQSAARELAGDADALAAAMARADVVYFSGITLAILDQC 162 (328)
T ss_dssp HHHHHHHTTEECTTCEECTTCCCEEEEEEEE-TTEEEEEEECTTCGGGGTTSCHHHHHHHHTTCSEEEEEHHHHHTSCHH
T ss_pred HHHHHHHcCCccceEEEcCCCCCeEEEEEec-CCceEEEEeCCCCHHHhhcCccccchHHhcCCCEEEECCchhhccCch
Confidence 9999999999999988877788999999999 88888777665432 1222222 23578899998742
Q ss_pred ChHHHHHHHHHHHhcCCcEEEcCCCCcccCC-----HHHHHHHhhcccEEEeCHHHHHHhhcCCCCC--HHHHhh-cCCE
Q psy8856 144 NCCNMIKHIKKILKLKIPFIFDPGQSLSMFT-----KEELIKIIKKSSYIIVNEYESKLLVSKTSLS--LQKINE-QVKV 215 (312)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~v~~D~~~~~~~~~-----~~~l~~ll~~~dvl~~n~~E~~~l~~~~~~~--~~~l~~-g~~~ 215 (312)
..+.+.++++.+++.+.++++||+++...|. .+.++++++++|++++|++|++.+++..+.. .+.+.+ +++.
T Consensus 163 ~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~l~~~g~~~ 242 (328)
T 4e69_A 163 GRATLLRALAQARATGRTIAFDPNLRPRLWAGTGEMTETIMQGAAVSDIALPSFEDEAAWFGDAGPDATADRYARAGVRS 242 (328)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECCCCGGGCSCHHHHHHHHHHHHTTCSEECCBHHHHHHHHTCSSHHHHHHHHHTTTCSE
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCCCChhhcCCHHHHHHHHHHHHHhCCEEeCCHHHHHHHcCCCCHHHHHHHHHhcCCCE
Confidence 2356778888889999999999998776662 3457789999999999999999999875321 123333 8999
Q ss_pred EEEeeCCCceEEEecCCceEEcCCcc-cCCcCCCCCchhhhHHHHHHHHHcCCCHHHHHHHHHHHhchheeeccCCC
Q psy8856 216 LIVTRGELGSDIFLNNERKIKIPCVK-ADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSSLMGSTEISHQGGQK 291 (312)
Q Consensus 216 vvvt~G~~G~~~~~~~~~~~~~~~~~-~~~~vdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~a~aa~~~~~~g~~~ 291 (312)
++||.|++|++++++ ++.+++|+++ ++ ++||+||||+|.|+|++++++|+++++|+++|+++|+.+|++.|+.+
T Consensus 243 vvvt~G~~G~~~~~~-~~~~~~~~~~~~~-vvdttGAGDaf~a~~~~~l~~g~~l~~a~~~A~~~aa~~v~~~Ga~~ 317 (328)
T 4e69_A 243 VVVKNGPHAVHFLQD-GRRGRVPVPPVAQ-VVDTTAAGDSFNAGLLDSVLAGQPLETAIAAAAALAGQVVQGKGALV 317 (328)
T ss_dssp EEEBCTTSCEEEEET-TEEEEECCCCCCS-CCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSSSC
T ss_pred EEEEeCCCCeEEEeC-CceEEecCCCCCC-ccCCCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHccCCCcC
Confidence 999999999999998 8889999986 54 99999999999999999999999999999999999999999999984
No 40
>2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=4.2e-41 Score=302.06 Aligned_cols=286 Identities=16% Similarity=0.208 Sum_probs=228.8
Q ss_pred CcEeeecceeeeeEEecCCcccCCCCccccccceeeeecCCcccccCCchHHHHHHHHHhCCCceEEEEeecC--hHHHH
Q psy8856 1 MNSLICGSLAFDNIMRFEGKFSNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLLNGNPLIVSILGKD--GSSYL 78 (312)
Q Consensus 1 m~i~~~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~~~~~~~vG~d--~~~i~ 78 (312)
|||+++|+.+.+....-... ..+.......+||++.|+|.+|++||.++.++|.+|+| |+.++
T Consensus 13 ~~~~~~ge~l~~~~~~~~~~---------------~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~i~ 77 (351)
T 2afb_A 13 MKVVTFGEIMLRLSPPDHKR---------------IFQTDSFDVTYGGAEANVAAFLAQMGLDAYFVTKLPNNPLGDAAA 77 (351)
T ss_dssp CEEEEESCCEEEEECSTTCC---------------GGGCSEEEEEEECHHHHHHHHHHHTTSEEEEEEEECSSHHHHHHH
T ss_pred ceEEEechhhheecCCCCcc---------------ccccceeeEecCChHHHHHHHHHHcCCCeEEEEEeCCCHHHHHHH
Confidence 89999999998855211100 11223457789999999999999999999999999999 78899
Q ss_pred HHHHHcCCccceeeecCCcccceEEEEEecCCCeeEEE-e-CC-ccccCCccccCC---cCCceEEEECCCC-------h
Q psy8856 79 KHLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIF-H-PG-AMQLSYDDNCIN---NADIKIAIISPDN-------C 145 (312)
Q Consensus 79 ~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~-~-~~-~~~~~~~~~~~~---~~~~~~~~~~~~~-------~ 145 (312)
+.|++.||+++++.. .+.+|+.+++..+.+++...+. . .+ ....+.++++.. ++.++++++++.. .
T Consensus 78 ~~L~~~gv~~~~v~~-~~~~t~~~~v~~~~~~r~~~v~~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~ 156 (351)
T 2afb_A 78 GHLRKFGVKTDYIAR-GGNRIGIYFLEIGASQRPSKVVYDRAHSAISEAKREDFDWEKILDGARWFHFSGITPPLGKELP 156 (351)
T ss_dssp HHHHHTTCBCTTEEE-CSSCCCEEEEECCBTTBCCEEEEECTTCTTTTCCGGGCCHHHHTTTEEEEEEETTSGGGSTTHH
T ss_pred HHHHHcCCcceeEEE-CCCcceEEEEEecCCCCcceEEEeCCCChhhhCChhhCCHHHhhcCCCEEEEeCcccccChhHH
Confidence 999999999999876 4568998888776544443333 2 11 223344444431 4788999988643 2
Q ss_pred HHHHHHHHHHHhcCCcEEEcCCCCcccCCH----HHHHHHhhcccEEEeCHHHHHHhhcCCCC---------CH------
Q psy8856 146 CNMIKHIKKILKLKIPFIFDPGQSLSMFTK----EELIKIIKKSSYIIVNEYESKLLVSKTSL---------SL------ 206 (312)
Q Consensus 146 ~~~~~~~~~~~~~~~~v~~D~~~~~~~~~~----~~l~~ll~~~dvl~~n~~E~~~l~~~~~~---------~~------ 206 (312)
+.+.++++.+++.+.++++||+.+...|.. +.+.++++++|++++|++|++.|++.... +.
T Consensus 157 ~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~~~~~~ 236 (351)
T 2afb_A 157 LILEDALKVANEKGVTVSCDLNYRARLWTKEEAQKVMIPFMEYVDVLIANEEDIEKVLGISVEGLDLKTGKLNREAYAKI 236 (351)
T ss_dssp HHHHHHHHHHHHHTCEEEEECCCCTTTCCHHHHHHHHHHHGGGCSEEEECHHHHHHHHCCCCSCC-------CHHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEeCCCchhcCChHHHHHHHHHHHhhCCEEEecHHHHHHHhCCCcccccccccccchhhHHHH
Confidence 667888888888999999999987666654 45678999999999999999999987542 21
Q ss_pred -HHHhh--cCCEEEEeeCCCce--------EEEecCCceEEcCCcccCCcCCCCCchhhhHHHHHHHHHcCCCHHHHHHH
Q psy8856 207 -QKINE--QVKVLIVTRGELGS--------DIFLNNERKIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRL 275 (312)
Q Consensus 207 -~~l~~--g~~~vvvt~G~~G~--------~~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~ag~~~~l~~g~~~~~a~~~ 275 (312)
+.+.+ +++.++||+|++|+ +++++ ++.+++|+++++ ++||+||||+|.|||++++.+|+++++|+++
T Consensus 237 ~~~l~~~~g~~~vvvT~G~~G~~~~~~~g~~~~~~-~~~~~~~~~~v~-vvdttGAGDaF~ag~~~~l~~g~~l~~a~~~ 314 (351)
T 2afb_A 237 AEEVTRKYNFKTVGITLRESISATVNYWSVMVFEN-GQPHFSNRYEIH-IVDRVGAGDSFAGALIYGSLMGFDSQKKAEF 314 (351)
T ss_dssp HHHHHHHHCCSEEEEEEEECSCSSEEEEEEEEEET-TEEEECCCEEEE-CSCCTTHHHHHHHHHHHHHHHTCCHHHHHHH
T ss_pred HHHHHHHcCCCEEEEEeCCcCccccccceeEEEeC-CcEEEcCCCCCc-cCCCCCchHHHHHHHHHHHHcCCCHHHHHHH
Confidence 23433 89999999999975 67777 888899999986 9999999999999999999999999999999
Q ss_pred HHHHhchheeeccCCCCCCChHHHHHHHHH
Q psy8856 276 SSLMGSTEISHQGGQKHCPSLSEIDQRFKE 305 (312)
Q Consensus 276 a~a~aa~~~~~~g~~~~~~~~~ev~~~~~~ 305 (312)
|+++|++++++.|+.. .|+.+|+++++++
T Consensus 315 A~~~aa~~v~~~G~~~-~~~~~ev~~~l~~ 343 (351)
T 2afb_A 315 AAAASCLKHTIPGDFV-VLSIEEIEKLASG 343 (351)
T ss_dssp HHHHHHHHTTSSSSSC-CCCHHHHHHHHTC
T ss_pred HHHHHHHHhCCCCCCC-CCCHHHHHHHHhc
Confidence 9999999999999875 7999999999875
No 41
>2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=5.3e-42 Score=305.41 Aligned_cols=280 Identities=15% Similarity=0.171 Sum_probs=228.6
Q ss_pred CcEeeecceeeeeEEecCCcccCCCCccccccceeeeec---CCcccccCCchHHHHHHHHHhCCCceEEEEeecC-hHH
Q psy8856 1 MNSLICGSLAFDNIMRFEGKFSNSLLPDQLDKINVSFYS---PTMKKEYGGCAGNIAYNLKLLNGNPLIVSILGKD-GSS 76 (312)
Q Consensus 1 m~i~~~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~GG~~~n~a~~l~~lG~~~~~~~~vG~d-~~~ 76 (312)
|+|+++|++++|.+..++ ++ . ++ .+.+. ......+||++.|+|.+|++||.++.++|.+|+| |+.
T Consensus 13 ~~~~v~G~~~vD~~~~~~-~~-~---~g------~~~~~s~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~vG~d~G~~ 81 (331)
T 2ajr_A 13 MVLTVTLNPALDREIFIE-DF-Q---VN------RLYRINDLSKTQMSPGGKGINVSIALSKLGVPSVATGFVGGYMGKI 81 (331)
T ss_dssp CEEEEESSCEEEEEEECT-TC-C---SS------CEEECCSGGGEEEEEESHHHHHHHHHHHTTCCEEEEEEEEHHHHHH
T ss_pred eEEEEecchHHeEEEEcC-Cc-c---CC------ceEEeccccceEEecCcHHHHHHHHHHHcCCCeEEEEEecCchHHH
Confidence 899999999999999998 53 2 32 24444 5667889999999999999999999999999999 889
Q ss_pred HHHHHHHcC--CccceeeecCCcccceEEEEEecCCCe-eEEEeCCccccCCccccC--------CcCCceEEEECCCC-
Q psy8856 77 YLKHLKYLG--ISNKYIQKINSMFTAQCFIVTDVNNNQ-ITIFHPGAMQLSYDDNCI--------NNADIKIAIISPDN- 144 (312)
Q Consensus 77 i~~~l~~~g--i~~~~~~~~~~~~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~- 144 (312)
+++.|++.| |+++++...+ .|+++++++++++++ +.....++ .++++++. .+..++++++++..
T Consensus 82 i~~~L~~~g~~V~~~~v~~~~--~t~~~~~~v~~~g~~~~~~~~~g~--~l~~~~~~~~~~~~~~~~~~~~~v~~~g~~~ 157 (331)
T 2ajr_A 82 LVEELRKISKLITTNFVYVEG--ETRENIEIIDEKNKTITAINFPGP--DVTDMDVNHFLRRYKMTLSKVDCVVISGSIP 157 (331)
T ss_dssp HHHHHHHHCTTEEEEEEEESS--CCEEEEEEEETTTTEEEEEECCCC--CCCHHHHHHHHHHHHHHHTTCSEEEEESCCC
T ss_pred HHHHHHHcCCccceEEEEcCC--CCeEEEEEEeCCCceEEEEeCCCC--CCCHHHHHHHHHHHHHhcccCCEEEEECCCC
Confidence 999999999 9999887654 467777777777777 44434443 24443332 14678999987544
Q ss_pred ----hHHHHHHHHHHHhcCCcEEEcCCCCcccCCHHHHHHHhhc---ccEEEeCHHH-HHHhhcCCCCCHH-------HH
Q psy8856 145 ----CCNMIKHIKKILKLKIPFIFDPGQSLSMFTKEELIKIIKK---SSYIIVNEYE-SKLLVSKTSLSLQ-------KI 209 (312)
Q Consensus 145 ----~~~~~~~~~~~~~~~~~v~~D~~~~~~~~~~~~l~~ll~~---~dvl~~n~~E-~~~l~~~~~~~~~-------~l 209 (312)
.+.+.++++.+++.+.++++||+. +.+.+++++ +|++++|++| ++.+++....+.+ .+
T Consensus 158 ~~~~~~~~~~~~~~a~~~g~~v~~D~~~-------~~~~~~l~~~~~~dil~~N~~E~~~~l~g~~~~~~~~~~~~~~~l 230 (331)
T 2ajr_A 158 PGVNEGICNELVRLARERGVFVFVEQTP-------RLLERIYEGPEFPNVVKPDLRGNHASFLGVDLKTFDDYVKLAEKL 230 (331)
T ss_dssp TTSCTTHHHHHHHHHHHTTCEEEEECCH-------HHHHHHHHSSCCCSEECCCCTTCCSCBTTBCCCSHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCEEEEECCh-------HHHHHHHhcCCCCeEEEeCccchHHHHhCCCCCCHHHHHHHHHHH
Confidence 367888899999999999999973 345677765 9999999999 9999886533222 22
Q ss_pred hhcCCEEEEeeCCCceEEEecCCceEEcC-CcccCCcCCCCCchhhhHHHHHHHHH-cCCCHHHHHHHHHHHhchheeec
Q psy8856 210 NEQVKVLIVTRGELGSDIFLNNERKIKIP-CVKADRIVDPTGCGDAFRSGVLFGII-NNLDWYTTGRLSSLMGSTEISHQ 287 (312)
Q Consensus 210 ~~g~~~vvvt~G~~G~~~~~~~~~~~~~~-~~~~~~~vdt~GaGDaf~ag~~~~l~-~g~~~~~a~~~a~a~aa~~~~~~ 287 (312)
.+.++.++||+|++|++++++ ++.+++| +++++ ++||+||||+|.|||++++. +|+++++|+++|+++|++++++.
T Consensus 231 ~~~~~~vvvT~G~~Ga~~~~~-~~~~~~~~~~~v~-vvDttGAGDaF~ag~l~~l~~~g~~~~~al~~A~a~aa~~v~~~ 308 (331)
T 2ajr_A 231 AEKSQVSVVSYEVKNDIVATR-EGVWLIRSKEEID-TSHLLGAGDAYVAGMVYYFIKHGANFLEMAKFGFASALAATRRK 308 (331)
T ss_dssp HHHSSEEEEEETTTEEEEECS-SCEEEEEESSCCC-GGGCTTHHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTTSS
T ss_pred HHhcCEEEEeecCCceEEEeC-CcEEEEecCCccc-ccCCCchHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCc
Confidence 223889999999999999988 7788999 88886 99999999999999999999 99999999999999999999999
Q ss_pred cCCCCCCChHHHHHHHHHh
Q psy8856 288 GGQKHCPSLSEIDQRFKEA 306 (312)
Q Consensus 288 g~~~~~~~~~ev~~~~~~~ 306 (312)
|+. .|+.+|+++++++.
T Consensus 309 G~~--~~~~~ev~~~~~~~ 325 (331)
T 2ajr_A 309 EKY--MPDLEAIKKEYDHF 325 (331)
T ss_dssp SCC--CCCHHHHHTTGGGE
T ss_pred CcC--CCCHHHHHHHHhhc
Confidence 986 79999999988764
No 42
>3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A*
Probab=100.00 E-value=7.3e-41 Score=295.37 Aligned_cols=278 Identities=19% Similarity=0.183 Sum_probs=219.7
Q ss_pred cEe-eecceeeeeEEecCCcccCCCCccccccceeeeecCCcccccCCchHHHHHHHHHhCCCceEEEEeecC-hHHHHH
Q psy8856 2 NSL-ICGSLAFDNIMRFEGKFSNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLLNGNPLIVSILGKD-GSSYLK 79 (312)
Q Consensus 2 ~i~-~~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~~~~~~~vG~d-~~~i~~ 79 (312)
+|+ +.|++++|++..++ ++. + +.+.+.......+||++.|+|.+|++||.++.++|.+|+| |+.+++
T Consensus 3 ~I~~v~g~~~~D~~~~~~-~~~----~------g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~d~g~~i~~ 71 (309)
T 3cqd_A 3 RIYTLTLAPSLDSATITP-QIY----P------EGKLRCTAPVFEPGGGGINVARAIAHLGGSATAIFPAGGATGEHLVS 71 (309)
T ss_dssp CEEEECSSCEEEEEEEES-CCC----S------SSEEECCCCEEEEESHHHHHHHHHHHTTCCEEEEEEECHHHHHHHHH
T ss_pred eEEEEeccchheEEEEcC-CCc----C------CCeeeccceeecCCchHHHHHHHHHHcCCCeEEEEEecCchHHHHHH
Confidence 566 55699999999998 541 2 3345556778899999999999999999999999999999 889999
Q ss_pred HHHHcCCccceeeecCCcccceEEEE-EecCCCeeEEEeCCccccCCcccc--------CCcCCceEEEECCCC-----h
Q psy8856 80 HLKYLGISNKYIQKINSMFTAQCFIV-TDVNNNQITIFHPGAMQLSYDDNC--------INNADIKIAIISPDN-----C 145 (312)
Q Consensus 80 ~l~~~gi~~~~~~~~~~~~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~-----~ 145 (312)
.|+++||+++++...+. |++++.+ ++++++++....+++. ++++.+ ..+++ +++++++.. .
T Consensus 72 ~l~~~gv~~~~v~~~~~--t~~~~~~~~~~~g~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~-~~v~~~g~~~~~~~~ 146 (309)
T 3cqd_A 72 LLADENVPVATVEAKDW--TRQNLHVHVEASGEQYRFVMPGAA--LNEDEFRQLEEQVLEIESG-AILVISGSLPPGVKL 146 (309)
T ss_dssp HHHHTTCCEEEEECSSC--CCCCEEEEETTTCCEEEEECCCCC--CCHHHHHHHHHHHHTSCTT-CEEEEESCCCTTCCH
T ss_pred HHHHcCCCceeEEcCCC--CeeEEEEEEcCCCCEEEEEcCCCC--CCHHHHHHHHHHHHHhhcC-CEEEEECCCCCCCCH
Confidence 99999999999876543 5555555 7777777655555432 333222 12456 888887643 3
Q ss_pred HHHHHHHHHHHhcCCcEEEcCCCCcccCCHHHHHHHh-hcc-cEEEeCHHHHHHhhcCCCCC---H----HHHhh-c-CC
Q psy8856 146 CNMIKHIKKILKLKIPFIFDPGQSLSMFTKEELIKII-KKS-SYIIVNEYESKLLVSKTSLS---L----QKINE-Q-VK 214 (312)
Q Consensus 146 ~~~~~~~~~~~~~~~~v~~D~~~~~~~~~~~~l~~ll-~~~-dvl~~n~~E~~~l~~~~~~~---~----~~l~~-g-~~ 214 (312)
+.+.++++.+++.+.++++||+. ..+.+.+ +.+ |++++|++|++.+++....+ . +.+.+ + ++
T Consensus 147 ~~~~~~~~~a~~~g~~v~~D~~~-------~~~~~~l~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~ 219 (309)
T 3cqd_A 147 EKLTQLISAAQKQGIRCIVDSSG-------EALSAALAIGNIELVKPNQKELSALVNRELTQPDDVRKAAQEIVNSGKAK 219 (309)
T ss_dssp HHHHHHHHHHHTTTCEEEEECCH-------HHHHHHTTTCCBSEECCBHHHHHHHHTSCCCSTTHHHHHHHHHHHTTSBS
T ss_pred HHHHHHHHHHHHcCCeEEEECCh-------HHHHHHHHhCCCEEEeeCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCC
Confidence 67788889999999999999973 2244443 788 99999999999999865322 1 22333 7 89
Q ss_pred EEEEeeCCCceEEEecCCceEEcCCcccCCcCCCCCchhhhHHHHHHHHHcCCCHHHHHHHHHHHhchheeeccCCCCCC
Q psy8856 215 VLIVTRGELGSDIFLNNERKIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSSLMGSTEISHQGGQKHCP 294 (312)
Q Consensus 215 ~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~a~aa~~~~~~g~~~~~~ 294 (312)
.++||+|++|++++++ ++.+++|+++++ ++||+||||+|.|||++++.+|+++++|+++|+++|+.++++.|+. .|
T Consensus 220 ~vvvt~G~~G~~~~~~-~~~~~~~~~~v~-~vdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~aa~~~~~~G~~--~~ 295 (309)
T 3cqd_A 220 RVVVSLGPQGALGVDS-ENCIQVVPPPVK-SQSTVGAGDSMVGAMTLKLAENASLEEMVRFGVAAGSAATLNQGTR--LC 295 (309)
T ss_dssp CEEEECGGGCEEEECS-SCEEEECCCSCC-CCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTC-------CC
T ss_pred EEEEEecCCceEEEEC-CceEEEeCCccc-cCCCcCcHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCcCCC--CC
Confidence 9999999999999988 778899999986 9999999999999999999999999999999999999999999987 79
Q ss_pred ChHHHHHHHHHh
Q psy8856 295 SLSEIDQRFKEA 306 (312)
Q Consensus 295 ~~~ev~~~~~~~ 306 (312)
+.+|+++++++.
T Consensus 296 ~~~~v~~~~~~~ 307 (309)
T 3cqd_A 296 SHDDTQKIYAYL 307 (309)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHh
Confidence 999999998764
No 43
>2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1
Probab=100.00 E-value=1.1e-40 Score=293.80 Aligned_cols=277 Identities=17% Similarity=0.154 Sum_probs=225.9
Q ss_pred CcEeeecceeeeeEEecCCcccCCCCccccccceeeeecCCcccccCCchHHHHHHHHHhCCCceEEEEeecC-hHHHHH
Q psy8856 1 MNSLICGSLAFDNIMRFEGKFSNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLLNGNPLIVSILGKD-GSSYLK 79 (312)
Q Consensus 1 m~i~~~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~~~~~~~vG~d-~~~i~~ 79 (312)
|-+.+.|++++|++..++ ++. + +.+.+.......+||++.|+|.+|++||.++.++|.+|++ |+.+++
T Consensus 1 mi~tv~~n~~~D~~~~~~-~~~----~------g~~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~~~~vG~~~g~~i~~ 69 (306)
T 2abq_A 1 MIYTVTLNPSIDYIVQVE-NFQ----Q------GVVNRSERDRKQPGGKGINVSRVLKRLGHETKALGFLGGFTGAYVRN 69 (306)
T ss_dssp CEEEEESSCEEEEEEECT-TCC----S------SSEEECSEEEEEEECHHHHHHHHHHHTTCCCEEEEEEEHHHHHHHHH
T ss_pred CEEEEecCchheEEEEcC-Ccc----c------CCeEEeceeEecCCchHHHHHHHHHHcCCCceEEEEecchhHHHHHH
Confidence 788999999999999998 552 2 3344555668889999999999999999999999999988 888999
Q ss_pred HHHHcCCccceeeecCCcccceEEEEEecCCCeeEEEeCCccccCCccccC-------CcCCceEEEECCCC-----hHH
Q psy8856 80 HLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIFHPGAMQLSYDDNCI-------NNADIKIAIISPDN-----CCN 147 (312)
Q Consensus 80 ~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~-----~~~ 147 (312)
.|++.||+++++...+ .|+.++.+ .+++++.....++ .++++++. .++.++++++++.. .+.
T Consensus 70 ~L~~~gv~~~~v~~~~--~t~~~~~~--~~g~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~ 143 (306)
T 2abq_A 70 ALEKEEIGLSFIEVEG--DTRINVKI--KGKQETELNGTAP--LIKKEHVQALLEQLTELEKGDVLVLAGSVPQAMPQTI 143 (306)
T ss_dssp HHHHTTCEECCEEESS--CCEEEEEE--ESSSCEEEBCCCC--CCCHHHHHHHHHHHTTCCTTCEEEEESCCCTTSCTTH
T ss_pred HHHHcCCceEEEEcCC--CCceEEEE--eCCceEEEECCCC--CCCHHHHHHHHHHHHhccCCCEEEEecCCCCCCCHHH
Confidence 9999999999987644 36666554 3566655444433 23333321 14678898887543 367
Q ss_pred HHHHHHHHHhcCCcEEEcCCCCcccCCHHHHHHHhh-cccEEEeCHHHHHHhhcCCCCCHH-------HHh-hcCCEEEE
Q psy8856 148 MIKHIKKILKLKIPFIFDPGQSLSMFTKEELIKIIK-KSSYIIVNEYESKLLVSKTSLSLQ-------KIN-EQVKVLIV 218 (312)
Q Consensus 148 ~~~~~~~~~~~~~~v~~D~~~~~~~~~~~~l~~ll~-~~dvl~~n~~E~~~l~~~~~~~~~-------~l~-~g~~~vvv 218 (312)
+.++++.+++.+.++++||+. +.+.++++ ++|++++|++|++.+++....+.+ .+. .+++.++|
T Consensus 144 ~~~~~~~a~~~g~~v~~D~~~-------~~~~~~l~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvv 216 (306)
T 2abq_A 144 YRSMTQIAKERGAFVAVDTSG-------EALHEVLAAKPSFIKPNHHELSELVSKPIASIEDAIPHVQRLIGEGIESILV 216 (306)
T ss_dssp HHHHHHHHHTTTCEEEEECCH-------HHHHHHGGGCCSEECCBHHHHHHHHTSCCCSHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHhcCCEEEEECCh-------HHHHHHHhcCCcEEecCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 788899999999999999963 35678899 999999999999999987543322 232 37999999
Q ss_pred eeCCCceEEEecCCceEEcCCcccCCcCCCCCchhhhHHHHHHHHHcCCCHHHHHHHHHHHhchheeeccCCCCCCChHH
Q psy8856 219 TRGELGSDIFLNNERKIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSSLMGSTEISHQGGQKHCPSLSE 298 (312)
Q Consensus 219 t~G~~G~~~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~a~aa~~~~~~g~~~~~~~~~e 298 (312)
|+|++|++++++ ++.+++|+++++ ++||+||||+|.|||++++.+|+++++|+++|+++|+.++++. +.|+.+|
T Consensus 217 t~G~~G~~~~~~-~~~~~~~~~~v~-vvdttGAGDaF~a~~~~~l~~g~~~~~a~~~A~a~aa~~v~~~----~~p~~~e 290 (306)
T 2abq_A 217 SFAGDGALFASA-EGMFHVNVPSGE-VRNSVGAGDSVVAGFLAALQEGKSLEDAVPFAVAAGSATAFSD----GFCTREE 290 (306)
T ss_dssp ECGGGCEEEEET-TEEEEECCCCCC-CCCCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHSS----SCCCHHH
T ss_pred ecCCCceEEEeC-CCEEEEeCCCcc-ccCCccHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCc----CCCCHHH
Confidence 999999999988 888899999986 9999999999999999999999999999999999999999998 2789999
Q ss_pred HHHHHHHhh
Q psy8856 299 IDQRFKEAF 307 (312)
Q Consensus 299 v~~~~~~~~ 307 (312)
+++++++..
T Consensus 291 v~~~~~~~~ 299 (306)
T 2abq_A 291 VERLQQQLQ 299 (306)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHhhEE
Confidence 999988653
No 44
>2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus}
Probab=100.00 E-value=4.5e-41 Score=296.30 Aligned_cols=279 Identities=16% Similarity=0.142 Sum_probs=225.7
Q ss_pred CcEeeecceeeeeEEecCCcccCCCCccccccceeeeecCCcccccCCchHHHHHHHHHhCCCceEEEEeecC-hHHHHH
Q psy8856 1 MNSLICGSLAFDNIMRFEGKFSNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLLNGNPLIVSILGKD-GSSYLK 79 (312)
Q Consensus 1 m~i~~~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~~~~~~~vG~d-~~~i~~ 79 (312)
|.+.+.|++++|++..++ ++. + +.+.+.......+||++.|+|.+|++||.++.++|.+|++ |+.+++
T Consensus 1 mi~tvt~n~~~D~~~~~~-~~~----~------g~~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~~~~vG~~~g~~i~~ 69 (306)
T 2jg5_A 1 MIYTVTFNPSIDYVIFTN-DFK----I------DGLNRATATYKFAGGKGINVSRVLKTLDVESTALGFAGGFPGKFIID 69 (306)
T ss_dssp CEEEEESSCEEEEEEECS-SCC----T------TSEEECSEEEEEEESHHHHHHHHHHHTTCCCEEEEEECHHHHHHHHH
T ss_pred CEEEEecCceEEEEEEcC-Ccc----c------CceEEeceeEecCCchHHHHHHHHHHcCCCeeEEEEecCcchHHHHH
Confidence 889999999999999998 541 2 3344555668889999999999999999999999999998 889999
Q ss_pred HHHHcCCccceeeecCCcccceEEEEEecCCCeeEEEeCCccccCCccccC-------CcCCceEEEECCCC-----hHH
Q psy8856 80 HLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIFHPGAMQLSYDDNCI-------NNADIKIAIISPDN-----CCN 147 (312)
Q Consensus 80 ~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~-----~~~ 147 (312)
.|++.||+++++...+ .|+.++.+ .+++++.....++. +.++++. .++.++++++++.. .+.
T Consensus 70 ~l~~~gv~~~~v~~~~--~t~~~~~~--~~g~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~ 143 (306)
T 2jg5_A 70 TLNNSAIQSNFIEVDE--DTRINVKL--KTGQETEINAPGPH--ITSTQFEQLLQQIKNTTSEDIVIVAGSVPSSIPSDA 143 (306)
T ss_dssp HHHHTTCEECCEECSS--CCEEEEEE--ESSSEEEEECCCCC--CCHHHHHHHHHHHTTCCTTCEEEEESCCCTTSCTTH
T ss_pred HHHHCCCceeEEEcCC--CCeEEEEE--cCCCEEEEECCCCC--CCHHHHHHHHHHHHhccCCCEEEEeCCCCCCCChHH
Confidence 9999999999887643 36666554 45666555444432 3333221 14578888887543 367
Q ss_pred HHHHHHHHHhcCCcEEEcCCCCcccCCHHHHHHHhh-cccEEEeCHHHHHHhhcCCCCCHH-------HHh-hcCCEEEE
Q psy8856 148 MIKHIKKILKLKIPFIFDPGQSLSMFTKEELIKIIK-KSSYIIVNEYESKLLVSKTSLSLQ-------KIN-EQVKVLIV 218 (312)
Q Consensus 148 ~~~~~~~~~~~~~~v~~D~~~~~~~~~~~~l~~ll~-~~dvl~~n~~E~~~l~~~~~~~~~-------~l~-~g~~~vvv 218 (312)
+.++++.+++.+.++++||+. ..+.++++ .+|++++|++|++.+++....+.+ .+. .+++.++|
T Consensus 144 ~~~~~~~a~~~g~~v~~D~~~-------~~~~~~l~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvv 216 (306)
T 2jg5_A 144 YAQIAQITAQTGAKLVVDAEK-------ELAESVLPYHPLFIKPNKDELEVMFNTTVNSDADVIKYGRLLVDKGAQSVIV 216 (306)
T ss_dssp HHHHHHHHHHHCCEEEEECCH-------HHHHHHGGGCCSEECCBHHHHHHHTTSCCCSHHHHHHHHHHHHHTTCSCEEE
T ss_pred HHHHHHHHHHCCCEEEEECCh-------HHHHHHHhcCCeEEecCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 788888888889999999963 34667787 699999999999999886543322 232 38899999
Q ss_pred eeCCCceEEEecCCceEEcCCcccCCcCCCCCchhhhHHHHHHHHHcCCCHHHHHHHHHHHhchheeeccCCCCCCChHH
Q psy8856 219 TRGELGSDIFLNNERKIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSSLMGSTEISHQGGQKHCPSLSE 298 (312)
Q Consensus 219 t~G~~G~~~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~a~aa~~~~~~g~~~~~~~~~e 298 (312)
|+|++|++++++ ++.+++|+++++ ++||+||||+|.|||++++.+|+++++|+++|+++|+.+|++.| .|+.+|
T Consensus 217 t~G~~G~~~~~~-~~~~~~~~~~v~-vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~a~aa~~v~~~G----~~~~~e 290 (306)
T 2jg5_A 217 SLGGDGAIYIDK-EISIKAVNPQGK-VVNTVGSGDSTVAGMVAGIASGLSIEKAFQQAVACGTATAFDED----LATRDA 290 (306)
T ss_dssp ECGGGCEEEECS-SEEEEEECCCCC-CCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSS----SCCHHH
T ss_pred ccCCCceEEEeC-CcEEEEeCCccc-ccCCcChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCCC----CCCHHH
Confidence 999999999988 888899999886 99999999999999999999999999999999999999999999 589999
Q ss_pred HHHHHHHhhcc
Q psy8856 299 IDQRFKEAFGY 309 (312)
Q Consensus 299 v~~~~~~~~~~ 309 (312)
+++++++..-+
T Consensus 291 v~~~~~~~~~~ 301 (306)
T 2jg5_A 291 IEKIKSQVTIS 301 (306)
T ss_dssp HHHHHTTCEEE
T ss_pred HHHHHhceEEE
Confidence 99998765433
No 45
>4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A*
Probab=100.00 E-value=1.5e-41 Score=304.48 Aligned_cols=276 Identities=16% Similarity=0.219 Sum_probs=219.7
Q ss_pred CcEeeecceeeeeEEe--cCCcc-cCCCCccccccceeeeecCCcccccCCchHHHHHHHHHhCCCceEEEEeecC--hH
Q psy8856 1 MNSLICGSLAFDNIMR--FEGKF-SNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLLNGNPLIVSILGKD--GS 75 (312)
Q Consensus 1 m~i~~~G~~~~D~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~~~~~~~vG~d--~~ 75 (312)
|||+++|+.++|.+.. ++ ++ |+...| ..........+||+ .|+|.+|++||.++.++|.+|+| |+
T Consensus 54 ~~ilvvG~~~~D~~~~g~v~-r~~p~~p~~--------~~~~~~~~~~~GG~-~NvA~~la~LG~~v~~ig~vG~D~~G~ 123 (352)
T 4e84_A 54 SRVLVVGDVMLDRYWFGNVD-RISPEAPVP--------VVHVQRQEERLGGA-ANVARNAVTLGGQAGLLCVVGCDEPGE 123 (352)
T ss_dssp CEEEEEECEEEEEEEEEEEE-EECSSSSSE--------EEEEEEEEEEEEEH-HHHHHHHHHTTCEEEEEEEEESSHHHH
T ss_pred CcEEEECccceEEEEeeccc-ccCCCCCcc--------eEEeeEEEEecChH-HHHHHHHHHcCCCEEEEEEeCCChhHH
Confidence 6899999999999876 54 44 211111 23345567889997 89999999999999999999999 88
Q ss_pred HHHHHHHHcCCccceeeecCCcccceEEEEEecCCCeeEEEe-CCccccCCcccc----CCcCCceEEEECCC---ChHH
Q psy8856 76 SYLKHLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIFH-PGAMQLSYDDNC----INNADIKIAIISPD---NCCN 147 (312)
Q Consensus 76 ~i~~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~---~~~~ 147 (312)
.+++.|++.||++. +...++.+|+.+++.++.++++..... .+.........+ ..+..++++++++. ..+.
T Consensus 124 ~i~~~L~~~GV~~~-~~~~~~~~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~g~~~~~~~~ 202 (352)
T 4e84_A 124 RIVELLGSSGVTPH-LERDPALPTTIKLRVLARQQQLLRVDFEAMPTHEVLLAGLARFDVLLPQHDVVLMSDYAKGGLTH 202 (352)
T ss_dssp HHHHHHTTTSCEEE-EEEETTSCCCEEEEEEESSCEEEEEEECCCCCHHHHHHHHHHHHHHGGGCSEEEEECCSSSSCSS
T ss_pred HHHHHHHHcCCcee-eEECCCCCCceEEEEEcCCceEEEEEcCCCCCHHHHHHHHHHHHHhcccCCEEEEeCCCCCCHHH
Confidence 99999999999994 555567799999988887665543332 222211111111 12568899999732 3355
Q ss_pred HHHHHHHHHhcCCcEEEcCCCCcccCCHHHHHHHhhcccEEEeCHHHHHHhhcCCCCCH-------HHHh--hcCCEEEE
Q psy8856 148 MIKHIKKILKLKIPFIFDPGQSLSMFTKEELIKIIKKSSYIIVNEYESKLLVSKTSLSL-------QKIN--EQVKVLIV 218 (312)
Q Consensus 148 ~~~~~~~~~~~~~~v~~D~~~~~~~~~~~~l~~ll~~~dvl~~n~~E~~~l~~~~~~~~-------~~l~--~g~~~vvv 218 (312)
+.++++.+++.+.++++||++.. | ++++.+|++++|++|++.+++. ..+. +.+. .+++.++|
T Consensus 203 ~~~~~~~a~~~g~~v~~D~~~~~--~------~~l~~~dil~pN~~Ea~~l~g~-~~~~~~~~~~a~~l~~~~g~~~Vvv 273 (352)
T 4e84_A 203 VTTMIEKARAAGKAVLVDPKGDD--W------ARYRGASLITPNRAELREVVGQ-WKSEDDLRARVANLRAELDIDALLL 273 (352)
T ss_dssp HHHHHHHHHHTTCEEEEECCSSC--C------STTTTCSEECCBHHHHHHHHCC-CSSHHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHhcCCEEEEECCCcc--h------hhccCCcEEcCCHHHHHHHhCC-CCCHHHHHHHHHHHHHHhCCCEEEE
Confidence 78888899999999999998632 2 4789999999999999999983 2222 2343 28999999
Q ss_pred eeCCCceEEEecCCceEEcCCcccCCcCCCCCchhhhHHHHHHHHHcCCCHHHHHHHHHHHhchheeeccCCCCCCChHH
Q psy8856 219 TRGELGSDIFLNNERKIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSSLMGSTEISHQGGQKHCPSLSE 298 (312)
Q Consensus 219 t~G~~G~~~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~a~aa~~~~~~g~~~~~~~~~e 298 (312)
|+|++|++++++ ++.+++|+++++ ++||+||||+|+|||++++++|+++++|+++|+++|+++|++.|+. .++.+|
T Consensus 274 T~G~~Ga~~~~~-~~~~~~pa~~v~-vvDttGAGDaF~ag~l~~l~~g~~l~~al~~A~aaaa~~v~~~Ga~--~~t~~e 349 (352)
T 4e84_A 274 TRSEEGMTLFSA-GGELHAPALARE-VFDVSGAGDTVIATVATMLGAGVPLVDAVVLANRAAGIVVGKLGTA--TVDYDE 349 (352)
T ss_dssp ECGGGCEEEEET-TEEEEECCCCSC-CSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSSC--CCCHHH
T ss_pred EcCCCcEEEEEC-CceEEecCCCcC-ccCCccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCCCc--cCCHHH
Confidence 999999999998 899999999986 9999999999999999999999999999999999999999999999 579999
Q ss_pred HH
Q psy8856 299 ID 300 (312)
Q Consensus 299 v~ 300 (312)
|+
T Consensus 350 l~ 351 (352)
T 4e84_A 350 LF 351 (352)
T ss_dssp HT
T ss_pred hc
Confidence 85
No 46
>2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=5.4e-41 Score=294.42 Aligned_cols=268 Identities=18% Similarity=0.170 Sum_probs=212.7
Q ss_pred CcEeeecceeeeeEEecCCcccCCCCccccccceeeeecCCcccccCCchHHHHHHHHHhCCCceEEEEeecC--hHHHH
Q psy8856 1 MNSLICGSLAFDNIMRFEGKFSNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLLNGNPLIVSILGKD--GSSYL 78 (312)
Q Consensus 1 m~i~~~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~~~~~~~vG~d--~~~i~ 78 (312)
|+|+++|+.++|.+ + . ...+||++.|+|.+|++||.++.++|.+|+| |+.++
T Consensus 4 ~~v~viG~~~~D~~---p----~-------------------~~~~GG~~~N~A~~la~LG~~~~~~~~vG~D~~g~~~~ 57 (296)
T 2qhp_A 4 NIIVGMGEALWDVL---P----E-------------------GKKIGGAPANFAYHVSQFGFDSRVVSAVGNDELGDEIM 57 (296)
T ss_dssp CEEEEESCCEEEEE---T----T-------------------EEEEECHHHHHHHHHHHTTCEEEEEEEEESSHHHHHHH
T ss_pred ceEEEEchhheEec---C----C-------------------CCCCCCHHHHHHHHHHHcCCCeeEEEEeCCChHHHHHH
Confidence 47999999999997 2 1 2567999999999999999999999999999 78899
Q ss_pred HHHHHcCCccceeeecCCcccceEEEEEecCCCeeEEEeCCc-cccCCc--cccCCcCCceEEEECCCC------hHHHH
Q psy8856 79 KHLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIFHPGA-MQLSYD--DNCINNADIKIAIISPDN------CCNMI 149 (312)
Q Consensus 79 ~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~------~~~~~ 149 (312)
+.|+++|| +++.+.++.+|+++++.+++++++.+.++.+. ...+.. .....+++++++++.... .+.+.
T Consensus 58 ~~l~~~gv--~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~ 135 (296)
T 2qhp_A 58 EVFKEKQL--KNQIERVDYPTGTVQVTLDDEGVPCYEIKEGVAWDNIPFTDELKRLALNTRAVCFGSLAQRNEVSRATIN 135 (296)
T ss_dssp HHHHHTTC--CEEEEEESSCCEEEEEC------CCEEECSSCGGGCCCCCHHHHHHHHTEEEEEECSGGGSSHHHHHHHH
T ss_pred HHHHHcCC--CEEeecCCCCceEEEEEECCCCCEEEEEecCChhhhCCcchhhHhhhcCCCEEEECChHhcChHHHHHHH
Confidence 99999999 67777667799999888887777666655543 233322 222234678898876532 24566
Q ss_pred HHHHHHHh-cCCcEEEcCCCCcccCCHHHHHHHhhcccEEEeCHHHHHHhhcCCC---CCH----HHHhh--cCCEEEEe
Q psy8856 150 KHIKKILK-LKIPFIFDPGQSLSMFTKEELIKIIKKSSYIIVNEYESKLLVSKTS---LSL----QKINE--QVKVLIVT 219 (312)
Q Consensus 150 ~~~~~~~~-~~~~v~~D~~~~~~~~~~~~l~~ll~~~dvl~~n~~E~~~l~~~~~---~~~----~~l~~--g~~~vvvt 219 (312)
++++.+++ .+.++++||+.+...|..+.+.++++++|++++|++|++.+++... .+. +.+.+ +++.++||
T Consensus 136 ~~~~~a~~~~~~~v~~D~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~~g~~~vvvt 215 (296)
T 2qhp_A 136 RFLDTMPDIDGQLKIFDINLRQDFYTKEVLRESFKRCNILKINDEELVTISRMFGYPGIDLQDKCWILLAKYNLKMLILT 215 (296)
T ss_dssp HHHHHSCCTTSCEEEEECCCCTTCCCHHHHHHHHHHCSEEEEEHHHHHHHHHHTTCTTSCHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHhcCCCEEEEECcCCccccCHHHHHHHHHHCCEEECCHHHHHHHhcccCCCCCCHHHHHHHHHHhcCCCEEEEe
Confidence 67777665 5889999999877667777788999999999999999999987421 222 23433 79999999
Q ss_pred eCCCceEEEecCCceEEcCCcccCCcCCCCCchhhhHHHHHHHHHcCCCHHHHHHHHHHHhchheeeccCCCCCCChHHH
Q psy8856 220 RGELGSDIFLNNERKIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSSLMGSTEISHQGGQKHCPSLSEI 299 (312)
Q Consensus 220 ~G~~G~~~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~a~aa~~~~~~g~~~~~~~~~ev 299 (312)
.|++|++++++ ++.+++|+++++ ++||+||||+|.|+|++++++|+++++|+++|+++|+.++++.|+... ..+++
T Consensus 216 ~G~~G~~~~~~-~~~~~~~~~~v~-~vdttGAGD~f~a~~~~~l~~g~~~~~a~~~a~~~aa~~v~~~G~~~~--~~~~l 291 (296)
T 2qhp_A 216 CGINGSYVFTP-GVVSFQETPKVP-VADTVGAGDSFTAAFCASILNGKSVPEAHKLAVEVSAYVCTQSGAMPE--LPVIL 291 (296)
T ss_dssp CGGGCEEEEET-TEEEEECCCCCC-CSCCTTHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHTSSSSSCC--CCHHH
T ss_pred ecCCCeEEEEC-CeEEEeCCCCCc-cccCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCCCCCCC--CcHHH
Confidence 99999999988 888999999986 999999999999999999999999999999999999999999999853 44444
Q ss_pred H
Q psy8856 300 D 300 (312)
Q Consensus 300 ~ 300 (312)
.
T Consensus 292 ~ 292 (296)
T 2qhp_A 292 K 292 (296)
T ss_dssp H
T ss_pred H
Confidence 3
No 47
>2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A
Probab=100.00 E-value=3.5e-40 Score=291.34 Aligned_cols=272 Identities=17% Similarity=0.231 Sum_probs=219.4
Q ss_pred CcEeeecceeeeeEEecCCcccCCCCccccccceeeeecCCcccccCCchHHHHHHHHHhCCCceEEEEeecC--hHHHH
Q psy8856 1 MNSLICGSLAFDNIMRFEGKFSNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLLNGNPLIVSILGKD--GSSYL 78 (312)
Q Consensus 1 m~i~~~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~~~~~~~vG~d--~~~i~ 78 (312)
|+|+++|++++|.+..++ ++|. ++ ...+.......+||++.|+|.+|++||.++.++|.+|+| |+.++
T Consensus 18 ~~i~viG~~~iD~~~~~~-~~p~---~~------~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~~ig~vG~D~~G~~l~ 87 (312)
T 2hlz_A 18 SQILCVGLVVLDVISLVD-KYPK---ED------SEIRCLSQRWQRGGNASNSCTILSLLGAPCAFMGSMAPGHVADFVL 87 (312)
T ss_dssp CEEEEESCCEEEEEEEES-SCCC---TT------CEEECSEEEEEEESHHHHHHHHHHHHTCCEEEEEEECSSHHHHHHH
T ss_pred CcEEEECcceEEEeeccc-cCCC---cc------ceeecccceeccCccHHHHHHHHHHcCCceEEEEEecCchHHHHHH
Confidence 679999999999999988 7754 22 233344456789999999999999999999999999998 78899
Q ss_pred HHHHHcCCccceeeecCCcccceEEEEEe-cCCCeeEEEeCCccccCCccccC--CcCCceEEEECCCChHHHHHHHHHH
Q psy8856 79 KHLKYLGISNKYIQKINSMFTAQCFIVTD-VNNNQITIFHPGAMQLSYDDNCI--NNADIKIAIISPDNCCNMIKHIKKI 155 (312)
Q Consensus 79 ~~l~~~gi~~~~~~~~~~~~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (312)
+.|+++||+++++...++.+|+.+++.++ .++++.+..+++....++++++. .+..++++++++..++...++++.+
T Consensus 88 ~~L~~~GV~~~~v~~~~~~~T~~~~~~v~~~~g~r~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~~~~a 167 (312)
T 2hlz_A 88 DDLRRYSVDLRYTVFQTTGSVPIATVIINEASGSRTILYYDRSLPDVSATDFEKVDLTQFKWIHIEGRNASEQVKMLQRI 167 (312)
T ss_dssp HHHHHTTCBCTTEEECSSCCCCEEEEEEETTTCCEEEEEECCCCCCCCHHHHHTSCGGGEEEEEEECSSHHHHHHHHHHH
T ss_pred HHHHHcCCCCccceeccCCCCCeEEEEEECCCCceEEEecCCccccCCHHHhhHhhhccCCEEEEeccCHHHHHHHHHHH
Confidence 99999999999887765567788777666 46777777776655555555443 2568899999988887777888887
Q ss_pred Hhc--------CCcEEEcCCCCcccCCHHHHHHHhhcccEEEeCHHHHHHhhcCCCCCHHH----Hhh-c-C-CEEEEee
Q psy8856 156 LKL--------KIPFIFDPGQSLSMFTKEELIKIIKKSSYIIVNEYESKLLVSKTSLSLQK----INE-Q-V-KVLIVTR 220 (312)
Q Consensus 156 ~~~--------~~~v~~D~~~~~~~~~~~~l~~ll~~~dvl~~n~~E~~~l~~~~~~~~~~----l~~-g-~-~~vvvt~ 220 (312)
++. +.++++|+.... +.+.++++++|++++|++|++.+ +.. +.++ +.+ . . +.++||+
T Consensus 168 ~~~~~~~~~~~~~~v~~d~~~~~-----~~~~~~l~~~dil~~n~~ea~~l-g~~--~~~~~~~~l~~~~~~g~~vvvt~ 239 (312)
T 2hlz_A 168 DAHNTRQPPEQKIRVSVEVEKPR-----EELFQLFGYGDVVFVSKDVAKHL-GFQ--SAEEALRGLYGRVRKGAVLVCAW 239 (312)
T ss_dssp HHHHTTSCGGGCCEEEEEECSCC-----GGGGGGGGSSSEEEECHHHHHHT-TCC--SHHHHHHHHGGGSCTTCEEEEEC
T ss_pred HHhcccccCCCCeEEEEEcccch-----HHHHHHHhcCCEEEEcHHHHHHc-CCC--CHHHHHHHHHHhcCCCCEEEEEe
Confidence 765 678999986532 34567999999999999999987 432 3332 333 2 2 7999999
Q ss_pred CCCceEEEecCCceEEcCCcccCCcCCCCCchhhhHHHHHHHHHcCCCHHHHHHHHHHHhchheeeccCC
Q psy8856 221 GELGSDIFLNNERKIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSSLMGSTEISHQGGQ 290 (312)
Q Consensus 221 G~~G~~~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~a~aa~~~~~~g~~ 290 (312)
|++|+++++++++.+++|+++..+++||+||||+|.|||++++.+|+++++|+++|+++|+.++++.|+.
T Consensus 240 G~~G~~~~~~~~~~~~~~~~~~~~vvdt~GAGDaf~a~~~~~l~~g~~~~~a~~~a~~~aa~~v~~~G~~ 309 (312)
T 2hlz_A 240 AEEGADALGPDGKLLHSDAFPPPRVVDTLGAGDTFNASVIFSLSQGRSVQEALRFGCQVAGKKCGLQGFD 309 (312)
T ss_dssp GGGCEEEECTTCCEEEECCCCCSSCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSSG
T ss_pred cccCeEEEccCCCEEECCCCCCCCcccCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhhcCcc
Confidence 9999999875256788998643249999999999999999999999999999999999999999999965
No 48
>1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A*
Probab=100.00 E-value=1.5e-40 Score=297.86 Aligned_cols=287 Identities=16% Similarity=0.195 Sum_probs=224.5
Q ss_pred CcEeeecceeeeeEEecCCcccCC--CCccc--------cccceeeeecCCcccccCCchHHHHHHHHHhC----CCceE
Q psy8856 1 MNSLICGSLAFDNIMRFEGKFSNS--LLPDQ--------LDKINVSFYSPTMKKEYGGCAGNIAYNLKLLN----GNPLI 66 (312)
Q Consensus 1 m~i~~~G~~~~D~~~~~~~~~~~~--~~~~~--------~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG----~~~~~ 66 (312)
|+|+++|++++|++..++..++.. +.++. .+..+...........+||++.|+|.++++|| .++.+
T Consensus 7 ~~v~viG~~~~D~~~~~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~lgg~~~~~~~~ 86 (345)
T 1bx4_A 7 NILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGSTQNSIKVAQWMIQQPHKAATF 86 (345)
T ss_dssp TCEEEECCCEEEEEEECCHHHHHHTTCCSSEEEECCGGGHHHHHHHHHHSCCEEEEECHHHHHHHHHHHHHCSSTTCEEE
T ss_pred ccEEEECCcceeEEEecCHHHHHHcCCCCCcEEEchHHHHHHHHHHhccCCceecCCcHHHHHHHHHHHhcCCCCCcEEE
Confidence 689999999999999988212100 01221 12222223335667889999999999999996 99999
Q ss_pred EEEeecC--hHHHHHHHHHcCCccceeeecCCcccceEEEEEecCCCeeEEEeCCccccCCcc-ccCC------cCCceE
Q psy8856 67 VSILGKD--GSSYLKHLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIFHPGAMQLSYDD-NCIN------NADIKI 137 (312)
Q Consensus 67 ~~~vG~d--~~~i~~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~------~~~~~~ 137 (312)
+|.+|+| |+.+++.|+++||+++++.. ++.+|+.+++.++ ++++.+....+....++++ ++.. +.++++
T Consensus 87 ig~vG~D~~G~~i~~~L~~~gv~~~~v~~-~~~~T~~~~~~~~-~g~r~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 164 (345)
T 1bx4_A 87 FGCIGIDKFGEILKRKAAEAHVDAHYYEQ-NEQPTGTCAACIT-GDNRSLIANLAAANCYKKEKHLDLEKNWMLVEKARV 164 (345)
T ss_dssp EEEEESSHHHHHHHHHHHHTTCEEEEEEE-SSSCCCEEEEEEE-TTEEEEEEECGGGGGCCGGGTTTSHHHHHHHHHCSE
T ss_pred EEEeCCChhHHHHHHHHHHcCCceeeeec-CCCCCceEEEEEc-CCceEeeeccchHhhcCcccccCcHHHHHHHhhCCE
Confidence 9999999 78899999999999998864 5668999998887 5666665566655556555 4442 357889
Q ss_pred EEECCC----ChHHHHHHHHHHHhcCCcEEEcCCCCcc-cCCHHHHHHHhhcccEEEeCHHHHHHhhcCCC---CCH---
Q psy8856 138 AIISPD----NCCNMIKHIKKILKLKIPFIFDPGQSLS-MFTKEELIKIIKKSSYIIVNEYESKLLVSKTS---LSL--- 206 (312)
Q Consensus 138 ~~~~~~----~~~~~~~~~~~~~~~~~~v~~D~~~~~~-~~~~~~l~~ll~~~dvl~~n~~E~~~l~~~~~---~~~--- 206 (312)
+++++. ..+.+.++++.+++.+.++++|+..... ....+.+.++++++|++++|++|++.+++... .+.
T Consensus 165 v~~~g~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~~~~ 244 (345)
T 1bx4_A 165 CYIAGFFLTVSPESVLKVAHHASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFETKDIKEI 244 (345)
T ss_dssp EEEEGGGGGTCHHHHHHHHHHHHHTTCEEEEECCSHHHHHHTHHHHHHHGGGCSEEEEEHHHHHHHHHHTTCCCCCHHHH
T ss_pred EEEEEEeccCCHHHHHHHHHHHHHcCCEEEEeCCcHHHHHHHHHHHHHHhccCCEEeCCHHHHHHHhcccCCCCCCHHHH
Confidence 988753 3477788888998889999999974211 01234567899999999999999999987532 222
Q ss_pred -HHHhh-------cCCEEEEeeCCCceEEEecCCceEEcCCccc--CCcCCCCCchhhhHHHHHHHHHcCCCHHHHHHHH
Q psy8856 207 -QKINE-------QVKVLIVTRGELGSDIFLNNERKIKIPCVKA--DRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLS 276 (312)
Q Consensus 207 -~~l~~-------g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~--~~~vdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a 276 (312)
+.+.+ +++.++||+|++|++++++ ++.+++|++++ .+++||+||||+|.|||++++++|+++++|+++|
T Consensus 245 ~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~-~~~~~~~~~~v~~~~vvDttGAGDaf~ag~~~~l~~g~~~~~a~~~A 323 (345)
T 1bx4_A 245 AKKTQALPKMNSKRQRIVIFTQGRDDTIMATE-SEVTAFAVLDQDQKEIIDTNGAGDAFVGGFLSQLVSDKPLTECIRAG 323 (345)
T ss_dssp HHHHHTSCCSCTTSCCEEEEEETTEEEEEECS-SCEEEECCCCCCCTTCCCHHHHHHHHHHHHHHHHTTTCCHHHHHHHH
T ss_pred HHHHHhcccccccCCCEEEEEeCCCCeEEEEC-CeEEEEeccccCcCccccCCCcchHHHHHHHHHHHcCCCHHHHHHHH
Confidence 33444 7899999999999999988 88889999876 1389999999999999999999999999999999
Q ss_pred HHHhchheeeccCC
Q psy8856 277 SLMGSTEISHQGGQ 290 (312)
Q Consensus 277 ~a~aa~~~~~~g~~ 290 (312)
+++|+.++++.|+.
T Consensus 324 ~~~aa~~v~~~G~~ 337 (345)
T 1bx4_A 324 HYAASIIIRRTGCT 337 (345)
T ss_dssp HHHHHHHTTSSSSC
T ss_pred HHHHHHHHhccCCC
Confidence 99999999999987
No 49
>2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A*
Probab=100.00 E-value=4.1e-39 Score=292.25 Aligned_cols=281 Identities=16% Similarity=0.154 Sum_probs=219.8
Q ss_pred CcEeeecceeeeeEEecCCc-c-----cCCCCccc--------cccceeeeecCCcccccCCchHHHHHHHHHh---CCC
Q psy8856 1 MNSLICGSLAFDNIMRFEGK-F-----SNSLLPDQ--------LDKINVSFYSPTMKKEYGGCAGNIAYNLKLL---NGN 63 (312)
Q Consensus 1 m~i~~~G~~~~D~~~~~~~~-~-----~~~~~~~~--------~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l---G~~ 63 (312)
|+|+++|++++|++..++ + + |. +++ .+..... +.......+||++.|+|.+|++| |.+
T Consensus 33 ~~vlviG~~~lD~~~~~~-~~~~~~~~~~---~g~~~~~~~~~~p~~~~~-~~~~~~~~~GG~~~NvA~~la~Lg~~g~~ 107 (383)
T 2abs_A 33 MRVFAIGNPILDLVAEVP-SSFLDEFFLK---RGDATLATPEQMRIYSTL-DQFNPTSLPGGSALNSVRVVQKLLRKPGS 107 (383)
T ss_dssp CCEEEECCCEEEEEEECC-HHHHHHTTCC---TTCEEECCGGGGGGGGTG-GGGCCEEEEESHHHHHHHHHHHHHCSTTS
T ss_pred ceEEEECcchheeEeccC-HHHHHhcCCC---CCceeechhhHHHHHHhh-ccccceeeCCChHHHHHHHHHHhccCCCc
Confidence 589999999999999887 4 3 21 221 1111111 23455778999999999999999 899
Q ss_pred ceEEEEeecC--hHHHHHHHHHcCCccceeeecCCcccceEEEEEecCCCeeEEEeCCccccCCcccc--CCcCCceEEE
Q psy8856 64 PLIVSILGKD--GSSYLKHLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIFHPGAMQLSYDDNC--INNADIKIAI 139 (312)
Q Consensus 64 ~~~~~~vG~d--~~~i~~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 139 (312)
+.++|.+|+| |+.+++.|++.||+++++. .++.+|+.+++.++ ++++.++...++...++.++. ..+..+++++
T Consensus 108 v~~ig~vG~D~~G~~i~~~L~~~GV~~~~v~-~~~~~T~~~~~~~~-~g~r~~~~~~~a~~~l~~~~~~~~~l~~~~~v~ 185 (383)
T 2abs_A 108 AGYMGAIGDDPRGQVLKELCDKEGLATRFMV-APGQSTGVCAVLIN-EKERTLCTHLGACGSFRLPEDWTTFASGALIFY 185 (383)
T ss_dssp EEEEEEECSSHHHHHHHHHHHHHTCEEEEEE-CTTCCCEEEEEEEE-TTEEEEEEECGGGGGCCCCTTHHHHTTTCCEEE
T ss_pred EEEEEEecCChhHHHHHHHHHHcCCceeeee-cCCCCCeEEEEEEc-CCceeEeeccChhhhCChhhhhHHHhhcCCEEE
Confidence 9999999999 7889999999999999886 45568999998887 567666666665544544321 1256889999
Q ss_pred ECCC----ChHHHHHHHHHHHh-cCCcEEEcCCCCcc-cCCHHHHHHHhhcccEEEeCHHHHHHhhcCCCC---------
Q psy8856 140 ISPD----NCCNMIKHIKKILK-LKIPFIFDPGQSLS-MFTKEELIKIIKKSSYIIVNEYESKLLVSKTSL--------- 204 (312)
Q Consensus 140 ~~~~----~~~~~~~~~~~~~~-~~~~v~~D~~~~~~-~~~~~~l~~ll~~~dvl~~n~~E~~~l~~~~~~--------- 204 (312)
+++. ..+.+.++++.+++ .++++++|+..... ....+.+.++++++|++++|++|++.|++....
T Consensus 186 ~~g~~~~~~~~~~~~~~~~a~~~~g~~v~~d~~~~~~~~~~~~~l~~ll~~~dil~pN~~Ea~~L~g~~~~~~~~~~~~s 265 (383)
T 2abs_A 186 ATAYTLTATPKNALEVAGYAHGIPNAIFTLNLSAPFCVELYKDAMQSLLLHTNILFGNEEEFAHLAKVHNLVAAEKTALS 265 (383)
T ss_dssp EEGGGGTTCHHHHHHHHHHHHTSTTCEEEEECCCHHHHHHCHHHHHHHHHTCSEEEEEHHHHHHHHHHHTCC--------
T ss_pred EeeecccCCHHHHHHHHHHHHHhcCCEEEEeCCcHHHHHHHHHHHHHHHhhCCEEeCCHHHHHHHhcccCcccccccccc
Confidence 8742 34778888899888 89999999864211 012355778999999999999999999864311
Q ss_pred ------CH----HHHhh--------cCCEEEEeeCCCceEEE-----ecCCceEEcCCccc---CCcCCCCCchhhhHHH
Q psy8856 205 ------SL----QKINE--------QVKVLIVTRGELGSDIF-----LNNERKIKIPCVKA---DRIVDPTGCGDAFRSG 258 (312)
Q Consensus 205 ------~~----~~l~~--------g~~~vvvt~G~~G~~~~-----~~~~~~~~~~~~~~---~~~vdt~GaGDaf~ag 258 (312)
+. +.+.+ +++.|+||+|++|++++ .+ ++.+++|++++ + ++||+||||+|.||
T Consensus 266 ~~~~~~~~~~~a~~l~~~~~~~~~~g~~~VvvT~G~~Ga~~~~~~~~~~-~~~~~~~~~~v~~~~-vvDttGAGDaF~ag 343 (383)
T 2abs_A 266 TANKEHAVEVCTGALRLLTAGQNTSATKLVVMTRGHNPVIAAEQTADGT-VVVHEVGVPVVAAEK-IVDTNGAGDAFVGG 343 (383)
T ss_dssp --CHHHHHHHHHHHHHHHHTTCCCSSCCEEEEECTTSCEEEEEECTTSC-EEEEEECCCCCCGGG-CCCCTTHHHHHHHH
T ss_pred cccccccHHHHHHHHHhccccccccCCCEEEEEcCCCCeEEEEeecCCC-CeEEEecCccCCcCC-cCcCCChHHHHHHH
Confidence 11 23333 78999999999999998 45 67788888776 5 89999999999999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHhchheeeccCC
Q psy8856 259 VLFGIINNLDWYTTGRLSSLMGSTEISHQGGQ 290 (312)
Q Consensus 259 ~~~~l~~g~~~~~a~~~a~a~aa~~~~~~g~~ 290 (312)
|++++++|+++++|+++|+++|+.+|++.|+.
T Consensus 344 ~~~~l~~g~~l~~al~~A~a~aa~~v~~~Ga~ 375 (383)
T 2abs_A 344 FLYALSQGKTVKQCIMCGNACAQDVIQHVGFS 375 (383)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHHTSSSCC
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHhcCCcc
Confidence 99999999999999999999999999999987
No 50
>1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=7.6e-37 Score=268.24 Aligned_cols=253 Identities=15% Similarity=0.120 Sum_probs=191.9
Q ss_pred ecCCcccccCCchHHHHHHHHHhCCCceEEEEeecChHHHHHHHHHcCCccceeeecCCcccceEEEEEecCCCeeEEEe
Q psy8856 38 YSPTMKKEYGGCAGNIAYNLKLLNGNPLIVSILGKDGSSYLKHLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIFH 117 (312)
Q Consensus 38 ~~~~~~~~~GG~~~n~a~~l~~lG~~~~~~~~vG~d~~~i~~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 117 (312)
+.......+||++.|+|.+|++||.++.++|.+|+|...+++.|++.||+++++.. ..+|+...+. ++++++.+...
T Consensus 27 ~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~~~~~~L~~~gVd~~~v~~--~~~t~~~~i~-~~~g~~~~~~~ 103 (298)
T 1vk4_A 27 VDGKREIAYGGGVVMGAITSSLLGVKTKVITKCTREDVSKFSFLRDNGVEVVFLKS--PRTTSIENRY-GSDPDTRESFL 103 (298)
T ss_dssp ETTEEEEEEECHHHHHHHHHHHTTCEEEEEEEECTTTGGGGTTTGGGTCEEEEEEC--SSCEEEEEEC------CCEEEE
T ss_pred ecCeEEEecCCHHHHHHHHHHHcCCceEEEEEEcCCHHHHHHHHHHcCCceEEEec--CCCcEEEEEE-cCCCCeeEEEe
Confidence 33345778999999999999999999999999999975578899999999998754 3355555444 44455444444
Q ss_pred CCccccCCccccCCcCCceEEEECCC-ChHHHHHHHHHHHhcCCcEEEcCCCC-ccc-------CCHHHHHHHhhcccEE
Q psy8856 118 PGAMQLSYDDNCINNADIKIAIISPD-NCCNMIKHIKKILKLKIPFIFDPGQS-LSM-------FTKEELIKIIKKSSYI 188 (312)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~D~~~~-~~~-------~~~~~l~~ll~~~dvl 188 (312)
.+....++++++.. ..++++++++. ..+...++++.+++.+.++++|++.. ... ...+.+.++++++|++
T Consensus 104 ~~~~~~l~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~~~~l~~~dil 182 (298)
T 1vk4_A 104 ISAADPFTESDLAF-IEGEAVHINPLWYGEFPEDLIPVLRRKVMFLSADAQGFVRVPENEKLVYRDWEMKEKYLKYLDLF 182 (298)
T ss_dssp EECCCCCCGGGGGG-CCSSEEEECCSSTTSSCGGGHHHHHHHCSEEEEETHHHHEEEETTEEEECCCTTHHHHGGGCSEE
T ss_pred ccccccCCHHHcCc-CCCCEEEECCcccccccHHHHHHHHHcCCEEEEecCccccccccccccccchHHHHhhcccCCEE
Confidence 44555566665543 57888888764 22334566777777899999999731 000 0112467899999999
Q ss_pred EeCHHHHHHhhcCCCCC--HHHHhh-cCCEEEEeeCCCceEEEecCCceEEcCCcccCCcCCCCCchhhhHHHHHHHHHc
Q psy8856 189 IVNEYESKLLVSKTSLS--LQKINE-QVKVLIVTRGELGSDIFLNNERKIKIPCVKADRIVDPTGCGDAFRSGVLFGIIN 265 (312)
Q Consensus 189 ~~n~~E~~~l~~~~~~~--~~~l~~-g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~ag~~~~l~~ 265 (312)
++|++|++.+++..+.. .+.+.+ |++.++||+ ++|++++++ +.+++|+++++ ++||+||||+|.|||++++++
T Consensus 183 ~~N~~E~~~l~g~~~~~~~~~~l~~~g~~~vvvT~-~~G~~~~~~--~~~~~~~~~v~-vvDttGAGDaF~a~~~~~l~~ 258 (298)
T 1vk4_A 183 KVDSREAETLTGTNDLRESCRIIRSFGAKIILATH-ASGVIVFDG--NFYEASFRSWS-LEGRTGRGDTCTAAFLVGFVF 258 (298)
T ss_dssp EEEHHHHHHHHSCSCHHHHHHHHHHTTCSSEEEEE-TTEEEEESS--SEEEEECCCSS-GGGGTTHHHHHHHHHHHHHHT
T ss_pred ecCHHHHHHHhCCCCHHHHHHHHHhcCCCEEEEEc-CCCcEEEeC--CEEEeccCCcc-cCCCcCccHHHHHHHHHHHHH
Confidence 99999999999865321 123333 899999999 999988865 56788988886 999999999999999999999
Q ss_pred -CCCHHHHHHHHHHHhchheeeccCCCCCCChHHH
Q psy8856 266 -NLDWYTTGRLSSLMGSTEISHQGGQKHCPSLSEI 299 (312)
Q Consensus 266 -g~~~~~a~~~a~a~aa~~~~~~g~~~~~~~~~ev 299 (312)
|+++++|+++|+++|+.++++.|+... ++.+|+
T Consensus 259 ~g~~~~~a~~~A~a~aa~~v~~~G~~~~-~~~~el 292 (298)
T 1vk4_A 259 KKMSIEKATKFAAAVTSVKMRHPGPLRR-EDLEAI 292 (298)
T ss_dssp SCCCHHHHHHHHHHHHHHHTTSSSSCCG-GGGGGC
T ss_pred cCCCHHHHHHHHHHHHHHHHccCCCCCC-CCHHHH
Confidence 999999999999999999999998863 676665
No 51
>2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 4en4_A* 4eoh_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A*
Probab=99.88 E-value=1.5e-22 Score=178.31 Aligned_cols=203 Identities=14% Similarity=0.165 Sum_probs=140.7
Q ss_pred CceEEEEeecC-hHHHHHHHHHcCCccceeeec--CCcccceEEEEEecCCCeeEEEeCCccccCCccccC-------C-
Q psy8856 63 NPLIVSILGKD-GSSYLKHLKYLGISNKYIQKI--NSMFTAQCFIVTDVNNNQITIFHPGAMQLSYDDNCI-------N- 131 (312)
Q Consensus 63 ~~~~~~~vG~d-~~~i~~~l~~~gi~~~~~~~~--~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~- 131 (312)
++.++|.+|+| +..+ |++.||+++++... .+ +|++.+ . .+ ..++.+++. .
T Consensus 12 ~~~~~g~vG~D~g~~i---L~~~GV~~~~v~~~~~~~-~t~~~~--~--~g-----------~~l~~~~i~~~~~~~~~~ 72 (312)
T 2yxt_A 12 SHVIRGYVGNRAATFP---LQVLGFEIDAVNSVQFSN-HTGYAH--W--KG-----------QVLNSDELQELYEGLRLN 72 (312)
T ss_dssp EEESSSCSTHHHHHHH---HHHTTCEEEEEEEEEESS-CTTSSC--C--CE-----------EECCHHHHHHHHHHHHHT
T ss_pred cccCCCccchHhhHHH---HHHcCCeEEEEEEEEecC-CCCcCC--c--cC-----------ccCCHHHHHHHHHHHHhc
Confidence 35677889988 6666 99999999887653 22 343322 0 11 011222111 0
Q ss_pred -cCCceEEEECCCC----hHHHHHHHHHHHhcCCc--EEEcCCCCcc------cCC----HHHHHH-HhhcccEEEeCHH
Q psy8856 132 -NADIKIAIISPDN----CCNMIKHIKKILKLKIP--FIFDPGQSLS------MFT----KEELIK-IIKKSSYIIVNEY 193 (312)
Q Consensus 132 -~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~--v~~D~~~~~~------~~~----~~~l~~-ll~~~dvl~~n~~ 193 (312)
+..++++++.... .+.+.++++.+++.+.. +++||+.+.. .|. .+.+.+ +++++|++++|++
T Consensus 73 ~~~~~~~v~~G~~~~~~~~~~~~~~~~~a~~~g~~~~vv~Dp~~~~~~~~sg~~~~~~~~~~~l~~~ll~~~dil~pN~~ 152 (312)
T 2yxt_A 73 NMNKYDYVLTGYTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWDGEGSMYVPEDLLPVYKEKVVPLADIITPNQF 152 (312)
T ss_dssp TCCCCSEEEECCCCCHHHHHHHHHHHHHHHHHCTTCEEEECCCCEEC--CCCEESSCTTHHHHHHHTTGGGCSEECCCHH
T ss_pred CCccCCEEEECCCCCHHHHHHHHHHHHHHHhhCCCCeEEECCCcCCCCCCCCCeeCCHHHHHHHHHHhhhhCCEEcCCHH
Confidence 3466776654322 34555778888877754 8899986432 221 234554 8999999999999
Q ss_pred HHHHhhcCCCCCHH-------HHhh-cCCEEEEeeCCCc------eEEE-------ecCC----ceEEcCCcccCCcCCC
Q psy8856 194 ESKLLVSKTSLSLQ-------KINE-QVKVLIVTRGELG------SDIF-------LNNE----RKIKIPCVKADRIVDP 248 (312)
Q Consensus 194 E~~~l~~~~~~~~~-------~l~~-g~~~vvvt~G~~G------~~~~-------~~~~----~~~~~~~~~~~~~vdt 248 (312)
|++.|++....+.+ .+.+ +++.|+||.|+.| ++++ ++++ +.+++|+++++ + ||
T Consensus 153 Ea~~L~g~~~~~~~~~~~~~~~l~~~g~~~VvvT~G~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-v-dt 230 (312)
T 2yxt_A 153 EAELLSGRKIHSQEEALRVMDMLHSMGPDTVVITSSDLPSPQGSNYLIVLGSQRRRNPAGSVVMERIRMDIRKVD-A-VF 230 (312)
T ss_dssp HHHHHHSCCCCSHHHHHHHHHHHHHHSCSEEEECCCSCCCTTCTTEEEEEEEEEC----CCCCEEEEEEEEECCS-S-CC
T ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCCceEEEEEeccccccccccccceEEEeecccC-C-CC
Confidence 99999987543322 2322 8999999988764 6665 4412 56788988886 6 99
Q ss_pred CCchhhhHHHHHHHHHc-CCCHHHHHHHHHHHhchheee
Q psy8856 249 TGCGDAFRSGVLFGIIN-NLDWYTTGRLSSLMGSTEISH 286 (312)
Q Consensus 249 ~GaGDaf~ag~~~~l~~-g~~~~~a~~~a~a~aa~~~~~ 286 (312)
+||||+|.|+|++++++ |+++++|+++|+++++.++.+
T Consensus 231 tGAGDaf~a~~~~~l~~~g~~l~~a~~~A~a~a~~~v~~ 269 (312)
T 2yxt_A 231 VGTGDLFAAMLLAWTHKHPNNLKVACEKTVSTLHHVLQR 269 (312)
T ss_dssp SSHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999 999999999999999888754
No 52
>2ddm_A Pyridoxine kinase; pyridoxal kinase, ribokinase, pyridoxal 5'-phosphate, vitamin B6, phosphorylation, transferase; 2.10A {Escherichia coli} PDB: 2ddo_A* 2ddw_A*
Probab=99.87 E-value=6.6e-22 Score=171.86 Aligned_cols=155 Identities=14% Similarity=0.146 Sum_probs=119.5
Q ss_pred cCCceEEEECCCC----hHHHHHHHHHHHh--cCCcEEEcCCCCc---ccCC----HHHH-HHHhhcccEEEeCHHHHHH
Q psy8856 132 NADIKIAIISPDN----CCNMIKHIKKILK--LKIPFIFDPGQSL---SMFT----KEEL-IKIIKKSSYIIVNEYESKL 197 (312)
Q Consensus 132 ~~~~~~~~~~~~~----~~~~~~~~~~~~~--~~~~v~~D~~~~~---~~~~----~~~l-~~ll~~~dvl~~n~~E~~~ 197 (312)
++.++++++.... .+.+.++++.+++ .+.++++||+.+. ..|. .+.+ .++++++|++++|+.|++.
T Consensus 86 ~~~~~~v~~G~l~~~~~~~~~~~~l~~a~~~~~g~~vv~Dp~~~~~~~~~~~~~~~~~~~~~~ll~~~dil~pN~~E~~~ 165 (283)
T 2ddm_A 86 LRQLRAVTTGYMGTASQIKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGITPNIFELEI 165 (283)
T ss_dssp CTTCCEEEECCCSCHHHHHHHHHHHHHHHTTCTTCEEEECCCCEETTTEECSCTTHHHHHHHTTGGGCSEECCBHHHHHH
T ss_pred cccCCEEEECCcCCHHHHHHHHHHHHHHHhcCCCCeEEECCcccCCCCCcccCHHHHHHHHHhhhhhceEecCCHHHHHH
Confidence 3467888876433 2556677777776 6899999998653 2332 1223 3588999999999999999
Q ss_pred hhcCCCCCHH-------HHhh-cCCEEEEeeCCC-------ceEEEecCCceEEcCCcccCCcCCCCCchhhhHHHHHHH
Q psy8856 198 LVSKTSLSLQ-------KINE-QVKVLIVTRGEL-------GSDIFLNNERKIKIPCVKADRIVDPTGCGDAFRSGVLFG 262 (312)
Q Consensus 198 l~~~~~~~~~-------~l~~-g~~~vvvt~G~~-------G~~~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~ag~~~~ 262 (312)
|++....+.+ ++.+ +++.|+||.|++ |++++++ ++.+++|++++. +||+||||+|.|+|+++
T Consensus 166 L~g~~~~~~~~~~~~a~~l~~~g~~~Vvvt~G~~~~~~~~~G~~~~~~-~~~~~~~~~~v~--vdt~GAGDaf~a~~~~~ 242 (283)
T 2ddm_A 166 LTGKNCRDLDSAIAAAKSLLSDTLKWVVVTSASGNEENQEMQVVVVTA-DSVNVISHSRVK--TDLKGTGDLFCAQLISG 242 (283)
T ss_dssp HHTSCCSSHHHHHHHHHHHCCSSCCEEEEEC-------CEEEEEEEET-TEEEEEEEECCC--CCCCCHHHHHHHHHHHH
T ss_pred HhCCCCCCHHHHHHHHHHHHHcCCCEEEEccccCccCCCceeEEEEeC-CceEEEeeceeC--CCCCChHHHHHHHHHHH
Confidence 9987543322 2222 789999999999 8888887 778889988873 79999999999999999
Q ss_pred HHcCCCHHHHHHHHHHHhchheeeccC
Q psy8856 263 IINNLDWYTTGRLSSLMGSTEISHQGG 289 (312)
Q Consensus 263 l~~g~~~~~a~~~a~a~aa~~~~~~g~ 289 (312)
+++|+++++|+++|+++++.++++...
T Consensus 243 l~~g~~~~~A~~~A~a~a~~~v~~~~~ 269 (283)
T 2ddm_A 243 LLKGKALTDAVHRAGLRVLEVMRYTQQ 269 (283)
T ss_dssp HHTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999987543
No 53
>1jxh_A Phosphomethylpyrimidine kinase; THID, ribokinase family, phophorylation, transferase; 2.30A {Salmonella typhimurium} SCOP: c.72.1.2 PDB: 1jxi_A*
Probab=99.83 E-value=1.2e-19 Score=157.90 Aligned_cols=151 Identities=13% Similarity=0.151 Sum_probs=114.2
Q ss_pred ceEEEECCC-ChHHHHHHHHHHHhcCCc-EEEcCCCCc----ccCCH---HHHHH-HhhcccEEEeCHHHHHHhhcC-CC
Q psy8856 135 IKIAIISPD-NCCNMIKHIKKILKLKIP-FIFDPGQSL----SMFTK---EELIK-IIKKSSYIIVNEYESKLLVSK-TS 203 (312)
Q Consensus 135 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~-v~~D~~~~~----~~~~~---~~l~~-ll~~~dvl~~n~~E~~~l~~~-~~ 203 (312)
++.+++... ..+.+..+++.+++.+.+ +++||..+. ..|.. +.+.+ +++.+|++++|+.|++.|++. ..
T Consensus 95 ~~~v~~G~l~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~g~~l~~~~~~~~l~~~ll~~~dil~pN~~Ea~~L~g~~~~ 174 (288)
T 1jxh_A 95 IDTTKIGMLAETDIVEAVAERLQRHHVRNVVLDTVMLAKSGDPLLSPSAIETLRVRLLPQVSLITPNLPEAAALLDAPHA 174 (288)
T ss_dssp CSEEEECCCCSHHHHHHHHHHHHHTTCCSEEEECCCC------CCCHHHHHHHHHHTGGGCSEEECBHHHHHHHHTCCCC
T ss_pred CCEEEECCCCCHHHHHHHHHHHHHCCCCeEEEcCcccCCCCCccCCHHHHHHHHHHHHhhCcEEcCCHHHHHHHcCCCCC
Confidence 456655443 346777788888888886 999998753 23443 23444 789999999999999999987 43
Q ss_pred CCHH-------HHhh-cCCEEEEeeCCCc-----eEEEecCCceEEcCCcccCCcCCCCCchhhhHHHHHHHHHcCCCHH
Q psy8856 204 LSLQ-------KINE-QVKVLIVTRGELG-----SDIFLNNERKIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNLDWY 270 (312)
Q Consensus 204 ~~~~-------~l~~-g~~~vvvt~G~~G-----~~~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~ag~~~~l~~g~~~~ 270 (312)
.+.+ ++.+ +++.|+||.|.+| ++++++ ++.+++|+++++ ++||+||||+|.|+|++++++|++++
T Consensus 175 ~~~~~~~~~a~~l~~~g~~~Vvvt~G~~G~~~~~~~~~~~-~~~~~~~~~~~~-~vdttGAGD~f~a~~~a~l~~g~~~~ 252 (288)
T 1jxh_A 175 RTEQEMLAQGRALLAMGCEAVLMKGGHLEDAQSPDWLFTR-EGEQRFSAPRVN-TKNTHGTGCTLSAALAALRPRHRSWG 252 (288)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEBC---------CEEECS-SCEEEC---CCC-CSCCBTHHHHHHHHHHHHGGGSSSHH
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEeccCCCCCceeEEEEEC-CeEEEEeccccC-CCCCCCchHHHHHHHHHHHHcCCCHH
Confidence 3322 2322 8899999999999 888887 778899998886 89999999999999999999999999
Q ss_pred HHHHHHHHHhchheeec
Q psy8856 271 TTGRLSSLMGSTEISHQ 287 (312)
Q Consensus 271 ~a~~~a~a~aa~~~~~~ 287 (312)
+|+++|+++++.++++.
T Consensus 253 ~A~~~A~a~a~~~v~~~ 269 (288)
T 1jxh_A 253 ETVNEAKAWLSAALAQA 269 (288)
T ss_dssp HHHHHHHHHHHHHHTTG
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99999999999998765
No 54
>1ub0_A THID, phosphomethylpyrimidine kinase; thiamin biosynthesis, ribokinase family, phosphorylati structural genomics; 2.05A {Thermus thermophilus} SCOP: c.72.1.2
Probab=99.83 E-value=1.1e-19 Score=155.74 Aligned_cols=151 Identities=11% Similarity=0.170 Sum_probs=115.1
Q ss_pred ceEEEECCC-ChHHHHHHHHHHHhcC-CcEEEcCCCCcc----cCCH---HHH-HHHhhcccEEEeCHHHHHHhhcCCCC
Q psy8856 135 IKIAIISPD-NCCNMIKHIKKILKLK-IPFIFDPGQSLS----MFTK---EEL-IKIIKKSSYIIVNEYESKLLVSKTSL 204 (312)
Q Consensus 135 ~~~~~~~~~-~~~~~~~~~~~~~~~~-~~v~~D~~~~~~----~~~~---~~l-~~ll~~~dvl~~n~~E~~~l~~~~~~ 204 (312)
++.+.+... ..+....+++.+++.+ .++++||+.+.. .|.. +.+ .++++++|++++|+.|++.|++....
T Consensus 71 ~~~v~~G~l~~~~~~~~~~~~~~~~~~~~vv~Dp~~~~~~g~~l~~~~~~~~~~~~ll~~~dil~pN~~E~~~L~g~~~~ 150 (258)
T 1ub0_A 71 LHAAKTGALGDAAIVEAVAEAVRRFGVRPLVVDPVMVAKSGDPLLAKEAAAALKERLFPLADLVTPNRLEAEALLGRPIR 150 (258)
T ss_dssp CSEEEECCCCSHHHHHHHHHHHHHTTCCSEEECCCC---------CHHHHHHHHHHTGGGCSEECCBHHHHHHHHCSCCC
T ss_pred CCEEEECCcCCHHHHHHHHHHHHhCCCCcEEECCeeecCCCCcccChHHHHHHHHhhcccCeEEeCCHHHHHHHhCCCCC
Confidence 344444332 3356667777778777 899999986532 3442 234 45789999999999999999987543
Q ss_pred CHH-------HHhh-cCCEEEEeeCCC-c----eEEEecCCceEEcCCcccCCcCCCCCchhhhHHHHHHHHHcCCCHHH
Q psy8856 205 SLQ-------KINE-QVKVLIVTRGEL-G----SDIFLNNERKIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNLDWYT 271 (312)
Q Consensus 205 ~~~-------~l~~-g~~~vvvt~G~~-G----~~~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~ag~~~~l~~g~~~~~ 271 (312)
+.+ ++.+ +++.+++|.|++ | ++++++ ++.+++|+++++ ++||+||||+|.|+|++++++|+++++
T Consensus 151 ~~~~~~~~a~~l~~~g~~~vvvt~g~~~G~~~~~~~~~~-~~~~~~~~~~~~-~~dt~GaGD~f~a~~~~~l~~g~~~~~ 228 (258)
T 1ub0_A 151 TLKEAEEAAKALLALGPKAVLLKGGHLEGEEAVDLLATR-GGVLRFSAPRVH-TRNTHGTGCTLSAAIAALLAKGRPLAE 228 (258)
T ss_dssp SHHHHHHHHHHHHTTSCSCEEEEEEECC---EEEEEEET-TEEEEEEECCCC-CSCCTTHHHHHHHHHHHHHHTTCCHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCCCCCceEEEEEeC-CeEEEEeccccC-CCCCCChHHHHHHHHHHHHHcCCCHHH
Confidence 322 2333 788999999998 8 778877 888889988886 899999999999999999999999999
Q ss_pred HHHHHHHHhchheeec
Q psy8856 272 TGRLSSLMGSTEISHQ 287 (312)
Q Consensus 272 a~~~a~a~aa~~~~~~ 287 (312)
|+++|+++++.++++.
T Consensus 229 a~~~a~~~~~~~~~~~ 244 (258)
T 1ub0_A 229 AVAEAKAYLTRALKTA 244 (258)
T ss_dssp HHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999998887653
No 55
>2i5b_A Phosphomethylpyrimidine kinase; ADP complex, PDXK, THID, ribokinase superfamily, transferase; HET: ADP; 2.80A {Bacillus subtilis}
Probab=99.81 E-value=8.7e-19 Score=151.16 Aligned_cols=152 Identities=13% Similarity=0.097 Sum_probs=119.8
Q ss_pred CceEEEECCC-ChHHHHHHHHHHHhcCC-cEEEcCCCCcccC----CH---HHHH-HHhhcccEEEeCHHHHHHhhcCC-
Q psy8856 134 DIKIAIISPD-NCCNMIKHIKKILKLKI-PFIFDPGQSLSMF----TK---EELI-KIIKKSSYIIVNEYESKLLVSKT- 202 (312)
Q Consensus 134 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~v~~D~~~~~~~~----~~---~~l~-~ll~~~dvl~~n~~E~~~l~~~~- 202 (312)
.++.+++... ..+....+++.+++.+. ++++||+.+...+ .. +.+. ++++++|++++|+.|++.|++..
T Consensus 74 ~~d~v~~G~l~~~~~~~~~~~~~~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~l~~~ll~~~diltpN~~E~~~L~g~~~ 153 (271)
T 2i5b_A 74 GVDAMKTGMLPTVDIIELAAKTIKEKQLKNVVIDPVMVCKGANEVLYPEHAQALREQLAPLATVITPNLFEASQLSGMDE 153 (271)
T ss_dssp CCSEEEECCCCSHHHHHHHHHHHHHTTCSSEEECCCCSSBCSSSBSSHHHHHHHHHHTGGGCSEECCBHHHHHHHHTCCC
T ss_pred CCCEEEECCCCCHHHHHHHHHHHHhCCCCCEEEcCCcCCCCCCcCcCHHHHHHHHHHhHhhCcEEcCCHHHHHHHhCCCC
Confidence 3456655442 24666777788888888 5999998754332 22 3454 68899999999999999999875
Q ss_pred CCCHH-------HHhh-cCCEEEEeeCC--Cce----EEEecCCceEEcCCcccCCcCCCCCchhhhHHHHHHHHHcCCC
Q psy8856 203 SLSLQ-------KINE-QVKVLIVTRGE--LGS----DIFLNNERKIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNLD 268 (312)
Q Consensus 203 ~~~~~-------~l~~-g~~~vvvt~G~--~G~----~~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~ag~~~~l~~g~~ 268 (312)
..+.+ .+.+ +.+.|++|.|. +|+ +++++ ++.+++++++++ ++||+||||+|.|+|++++++|++
T Consensus 154 ~~~~~~~~~~a~~l~~~g~~~Vvvt~g~~~~g~~~~~~~~~~-~~~~~~~~~~~~-~~dt~GaGD~f~a~~~~~l~~g~~ 231 (271)
T 2i5b_A 154 LKTVDDMIEAAKKIHALGAQYVVITGGGKLKHEKAVDVLYDG-ETAEVLESEMID-TPYTHGAGCTFSAAVTAELAKGAE 231 (271)
T ss_dssp CCSHHHHHHHHHHHHTTTCSEEEEECGGGSCSSSEEEEEECS-SCEEEEEECCCC-CSCCBTHHHHHHHHHHHHHHTTCC
T ss_pred CCCHHHHHHHHHHHHHhCCCEEEEcCCCCCCCCceEEEEEeC-CeEEEEeccccC-CCCCCChHHHHHHHHHHHHHcCCC
Confidence 33222 2333 78999999999 784 67776 778889998886 899999999999999999999999
Q ss_pred HHHHHHHHHHHhchheeec
Q psy8856 269 WYTTGRLSSLMGSTEISHQ 287 (312)
Q Consensus 269 ~~~a~~~a~a~aa~~~~~~ 287 (312)
+++|+++|+++++.++.+.
T Consensus 232 ~~~A~~~A~~~~~~~~~~~ 250 (271)
T 2i5b_A 232 VKEAIYAAKEFITAAIKES 250 (271)
T ss_dssp HHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999999999998764
No 56
>3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A*
Probab=99.75 E-value=2e-17 Score=143.89 Aligned_cols=139 Identities=14% Similarity=0.130 Sum_probs=109.5
Q ss_pred HHHHHHHHHHHhcC--CcEEEcCCCC----cccCCH---HHHHH-HhhcccEEEeCHHHHHHhhcCCCCCHH-------H
Q psy8856 146 CNMIKHIKKILKLK--IPFIFDPGQS----LSMFTK---EELIK-IIKKSSYIIVNEYESKLLVSKTSLSLQ-------K 208 (312)
Q Consensus 146 ~~~~~~~~~~~~~~--~~v~~D~~~~----~~~~~~---~~l~~-ll~~~dvl~~n~~E~~~l~~~~~~~~~-------~ 208 (312)
+.+.++++.+++++ .++++||... ...+.. +.+.+ +++.+|++++|..|++.|+|....+.+ .
T Consensus 93 ~~v~~~l~~~~~~~~~~~vv~DPVm~~~~~~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g~~~~~~~~~~~aa~~ 172 (289)
T 3pzs_A 93 SHILAAVAQVKQANPDAWYFCDPVMGHPEKGCIVAPGVAEFFCNEALPASDMIAPNLLELEQLSGERVENVEQAVQVARS 172 (289)
T ss_dssp HHHHHHHHHHHHHCTTCEEEECCCCEETTTEECSCHHHHHHHHHTHHHHCSEECCCHHHHHHHHTSCCCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCeEEEcCccccCCCCcccCHHHHHHHHHHhhccCCEEeCCHHHHHHHhCCCCCCHHHHHHHHHH
Confidence 56677777777655 7899999642 223443 33443 789999999999999999997644332 2
Q ss_pred Hhh-cCCEEEEeeC-CCce-------EEEecCCceEEcCCcccCCc--CCCCCchhhhHHHHHHHHHcCCCHHHHHHHHH
Q psy8856 209 INE-QVKVLIVTRG-ELGS-------DIFLNNERKIKIPCVKADRI--VDPTGCGDAFRSGVLFGIINNLDWYTTGRLSS 277 (312)
Q Consensus 209 l~~-g~~~vvvt~G-~~G~-------~~~~~~~~~~~~~~~~~~~~--vdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~ 277 (312)
+.+ |.+.|+||.| .+|+ +++++ ++.+++++++++ + +|++|+||+|.|+|++++++|+++++|+++|+
T Consensus 173 l~~~g~~~Vvvt~~~~~G~~~~~~~~~~~~~-~~~~~~~~~~~~-~~v~dt~GaGD~f~a~~~~~l~~g~~~~~A~~~A~ 250 (289)
T 3pzs_A 173 LCARGPKVVLVKHLSRAGYHADCFEMLLVTA-DDAWHICRPLVD-FGKRQPVGVGDLTSGLLLVNLLKGEPLDKALEHVT 250 (289)
T ss_dssp HHTTSCSEEEECCCGGGSSCTTEEEEEEECS-SCEEEEEEECCC-CTTSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHCCCEEEEecccCCCCCCCeEEEEEEeC-CeEEEEEeeeec-CCCCCCCcHHHHHHHHHHHHHHCCCCHHHHHHHHH
Confidence 332 8999999985 4776 67777 778888887775 6 89999999999999999999999999999999
Q ss_pred HHhchheee
Q psy8856 278 LMGSTEISH 286 (312)
Q Consensus 278 a~aa~~~~~ 286 (312)
++++..+.+
T Consensus 251 ~~~~~~i~~ 259 (289)
T 3pzs_A 251 AAVYEVMLK 259 (289)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 987777665
No 57
>3mbh_A Putative phosphomethylpyrimidine kinase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PXL; 2.00A {Bacteroides thetaiotaomicron} PDB: 3mbj_A*
Probab=99.74 E-value=1.4e-17 Score=144.75 Aligned_cols=152 Identities=18% Similarity=0.162 Sum_probs=115.3
Q ss_pred CCceEEEE-CCCChHHHHHHHHHHHhcCCcEEEcCCCCcc--cCC---H---HHHHHHhhcccEEEeCHHHHHHhhcCCC
Q psy8856 133 ADIKIAII-SPDNCCNMIKHIKKILKLKIPFIFDPGQSLS--MFT---K---EELIKIIKKSSYIIVNEYESKLLVSKTS 203 (312)
Q Consensus 133 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~D~~~~~~--~~~---~---~~l~~ll~~~dvl~~n~~E~~~l~~~~~ 203 (312)
+.+...++ +....+.+.++++.+++.+.++++||..+.. +|. . +.++++++.+|++++|..|++.|++...
T Consensus 79 ~aik~G~l~s~~~i~~v~~~l~~~~~~~~~vv~DPv~~~~g~l~~~~~~~~~~~~~~ll~~adiitpN~~Ea~~L~g~~~ 158 (291)
T 3mbh_A 79 DAIYTGYLGSPRQIQIVSDFIKDFRQPDSLIVADPVLGDNGRLYTNFDMEMVKEMRHLITKADVITPNLTELFYLLDEPY 158 (291)
T ss_dssp SEEEECCCSSTTHHHHHHHHHHHHCCTTCEEEECCCCEETTEECTTCCHHHHHHHHHHGGGCSEECCBHHHHHHHHTCCC
T ss_pred CEEEECCCCCHHHHHHHHHHHHHhcCCCCcEEECceeeeCCCCCCCCCHHHHHHHHHHhccCCEEeCCHHHHHHHhCCCC
Confidence 34444455 3445677778887776668999999997543 232 2 2467899999999999999999998753
Q ss_pred C---CH-------HHHhh-cCCEEEEeeCC-------CceEEEecCC-ceEEcCCcccCCcCCCCCchhhhHHHHHHHHH
Q psy8856 204 L---SL-------QKINE-QVKVLIVTRGE-------LGSDIFLNNE-RKIKIPCVKADRIVDPTGCGDAFRSGVLFGII 264 (312)
Q Consensus 204 ~---~~-------~~l~~-g~~~vvvt~G~-------~G~~~~~~~~-~~~~~~~~~~~~~vdt~GaGDaf~ag~~~~l~ 264 (312)
. +. +.+.+ |++.|+||.|. .|++++++++ +.++++++++ .+|++|+||+|.|+|+++++
T Consensus 159 ~~~~~~~~~~~aa~~L~~~g~~~Vvvtgg~~~~~~g~~g~~~~~~~~~~~~~~~~~~~--~~dt~GaGD~f~aai~a~l~ 236 (291)
T 3mbh_A 159 KADSTDEELKEYLRLLSDKGPQVVIITSVPVHDEPHKTSVYAYNRQGNRYWKVTCPYL--PAHYPGTGDTFTSVITGSLM 236 (291)
T ss_dssp CSCCCHHHHHHHHHHHHHTSCSEEEEEEEEETTEEEEEEEEEEETTTTEEEEEEESCC--GGGSTTHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhhCCCEEEEEeccccCCCCcEEEEEEeCCCCeEEEEEeccc--CCCCCChHHHHHHHHHHHHH
Confidence 2 22 22332 89999999654 5777776522 4567888765 38999999999999999999
Q ss_pred cCCCHHHHHHHHHHHhchheee
Q psy8856 265 NNLDWYTTGRLSSLMGSTEISH 286 (312)
Q Consensus 265 ~g~~~~~a~~~a~a~aa~~~~~ 286 (312)
+|.++++|+++|+++++..+.+
T Consensus 237 ~g~~l~~A~~~A~~~~~~ai~~ 258 (291)
T 3mbh_A 237 QGDSLPMALDRATQFILQGIRA 258 (291)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHT
T ss_pred cCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998877765
No 58
>3h74_A Pyridoxal kinase; PSI-II, structural genomics, prote structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.30A {Lactobacillus plantarum} PDB: 3hyo_A* 3ibq_A*
Probab=99.70 E-value=1.3e-16 Score=137.90 Aligned_cols=139 Identities=11% Similarity=0.080 Sum_probs=107.4
Q ss_pred hHHHHHHHHHHHh-cCCcEEEcCCCCc--ccC---CH---HHHHHHhhcccEEEeCHHHHHHhhcCCCC---CH----HH
Q psy8856 145 CCNMIKHIKKILK-LKIPFIFDPGQSL--SMF---TK---EELIKIIKKSSYIIVNEYESKLLVSKTSL---SL----QK 208 (312)
Q Consensus 145 ~~~~~~~~~~~~~-~~~~v~~D~~~~~--~~~---~~---~~l~~ll~~~dvl~~n~~E~~~l~~~~~~---~~----~~ 208 (312)
.+....+.+.+++ .+.++++||+.+. .+| .. +.++++++.+|++++|..|++.|++.... +. +.
T Consensus 86 ~~~i~~v~~~l~~~~~~~vv~DPv~~~~g~l~~l~~~~~~~~l~~ll~~adiitpN~~Ea~~L~g~~~~~~~~~~~aa~~ 165 (282)
T 3h74_A 86 VALCQQITTYLEQQTLSLLVVDPVLGDLGQLYQGFDQDYVAAMRQLIQQADVILPNTTEAALLTGAPYQVTPDLEVILPA 165 (282)
T ss_dssp HHHHHHHHHHHHHSCCSEEEECCCCEETTEECTTCCHHHHHHHHHHGGGCSEECCCHHHHHHHHTCCCCSSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCcEEEcCeeecCCCCCCCCCHHHHHHHHHHhccCCEECCCHHHHHHHhCCCCCCHHHHHHHHHH
Confidence 3444444444443 4688999998763 223 23 34678999999999999999999987532 22 33
Q ss_pred Hhh--cC-CEEEEeeCC----CceEEEe-cCCceEEcCCcccCCcCCCCCchhhhHHHHHHHHHcCCCHHHHHHHHHHHh
Q psy8856 209 INE--QV-KVLIVTRGE----LGSDIFL-NNERKIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSSLMG 280 (312)
Q Consensus 209 l~~--g~-~~vvvt~G~----~G~~~~~-~~~~~~~~~~~~~~~~vdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~a~a 280 (312)
+.+ |+ +.|+||.|. .|+++++ + ++.++++++++ ++|++|+||+|.|+|++++++|+++++|+++|++++
T Consensus 166 L~~~~g~~~~Vvvt~G~~~~~~g~~~~~~~-~~~~~~~~~~v--~~dt~GaGD~fsaai~a~l~~g~~l~~A~~~A~~~~ 242 (282)
T 3h74_A 166 LQAQLKTGAHAVITDVQRADQIGCAWLDEA-GHVQYCGARRL--PGHYNGTGDTLAAVIAGLLGRGYPLAPTLARANQWL 242 (282)
T ss_dssp HHTTSCTTCEECEEEEEETTEEEEEEECTT-SCEEEEEEECC--SSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHHhCCCCEEEEEecCCCCceEEEEEeCC-CeEEEEEecCC--CCCCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 443 78 899999994 6887775 5 77778888776 389999999999999999999999999999999998
Q ss_pred chheee
Q psy8856 281 STEISH 286 (312)
Q Consensus 281 a~~~~~ 286 (312)
+.++.+
T Consensus 243 ~~ai~~ 248 (282)
T 3h74_A 243 NMAVAE 248 (282)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888765
No 59
>3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei}
Probab=99.65 E-value=1.5e-15 Score=132.50 Aligned_cols=138 Identities=17% Similarity=0.142 Sum_probs=101.6
Q ss_pred HHHHHHHHHHHhcC------CcEEEcCCCCcc--cCC----HHHHHHHhhcccEEEeCHHHHHHhhcCCCCCHH------
Q psy8856 146 CNMIKHIKKILKLK------IPFIFDPGQSLS--MFT----KEELIKIIKKSSYIIVNEYESKLLVSKTSLSLQ------ 207 (312)
Q Consensus 146 ~~~~~~~~~~~~~~------~~v~~D~~~~~~--~~~----~~~l~~ll~~~dvl~~n~~E~~~l~~~~~~~~~------ 207 (312)
+.+.++++.+++.+ .++++||..... .|. .+.++++++.+|++++|..|++.|+|....+.+
T Consensus 92 ~~v~~~l~~~k~~~~~~~~~~~vv~DPVm~d~G~~~~~~~~~~~~~~Ll~~adiitPN~~Ea~~L~g~~~~~~~~~~~aa 171 (300)
T 3zs7_A 92 GRIRDTLKEVRELREKEDKKLTFICDPVMGDDGIMYCKKEVLDAYRELVPLADIVTPNYFEASLLSGVTVNDLSSAILAA 171 (300)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCEEEECCCC---------CTHHHHHHHHGGGCSEECCCHHHHHHHHSSCCCSHHHHHHHH
T ss_pred HHHHHHHHHHHhhCcCcCCCceEEEccccccCCCeecCHHHHHHHHHHhhhCCEecCCHHHHHHHhCCCCCCHHHHHHHH
Confidence 56667777766544 789999975432 332 244667999999999999999999997644332
Q ss_pred -HHh-hcCCEEEEeeCCCc----e--EEEecC------CceEEcCCcccCCcCCCCCchhhhHHHHHHHHHcCCCHHHHH
Q psy8856 208 -KIN-EQVKVLIVTRGELG----S--DIFLNN------ERKIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTG 273 (312)
Q Consensus 208 -~l~-~g~~~vvvt~G~~G----~--~~~~~~------~~~~~~~~~~~~~~vdt~GaGDaf~ag~~~~l~~g~~~~~a~ 273 (312)
.+. .|++.|+||.|..| . .++..+ ++.++++.++++ . +++|+||+|.|+|++++ +|+++.+|+
T Consensus 172 ~~L~~~G~~~Vvvt~g~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~-~-~~~GtGD~fsaal~a~l-~g~~~~~Av 248 (300)
T 3zs7_A 172 DWFHNCGVAHVIIKSFREQENPTHLRFLYSVKEGSEAAVRRFSGVVPYHE-G-RYTGTGDVFAACLLAFS-HSHPMDVAI 248 (300)
T ss_dssp HHHHHHTCSEEEEEEEC---CCSEEEEEEEECCSTTSCCEEEEEEEECCS-S-CBTTHHHHHHHHHHHHH-TTSCHHHHH
T ss_pred HHHHHhCCCEEEEecCcCCCCCceEEEEEeccccccCCCeEEEEEeccCC-C-CCcCHHHHHHHHHHHHH-cCCCHHHHH
Confidence 232 28999999999988 1 344431 366788888876 4 89999999999999999 999999999
Q ss_pred HHHHHHhchheee
Q psy8856 274 RLSSLMGSTEISH 286 (312)
Q Consensus 274 ~~a~a~aa~~~~~ 286 (312)
++|++.....+.+
T Consensus 249 ~~A~~~v~~~i~~ 261 (300)
T 3zs7_A 249 GKSMAVLQELIIA 261 (300)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999996666544
No 60
>1ekq_A Hydroxyethylthiazole kinase; alpha-beta, transferase; 1.50A {Bacillus subtilis} SCOP: c.72.1.2 PDB: 1ekk_A 1c3q_A 1esj_A 1esq_A*
Probab=99.49 E-value=4.9e-13 Score=114.91 Aligned_cols=142 Identities=18% Similarity=0.031 Sum_probs=97.5
Q ss_pred CceEEEECC-CC----hHHHHHHHHHHHhcCCcEEEcCCCCcccC-CHHHHHHHhh--cccEEEeCHHHHHHhhcCC-C-
Q psy8856 134 DIKIAIISP-DN----CCNMIKHIKKILKLKIPFIFDPGQSLSMF-TKEELIKIIK--KSSYIIVNEYESKLLVSKT-S- 203 (312)
Q Consensus 134 ~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~v~~D~~~~~~~~-~~~~l~~ll~--~~dvl~~n~~E~~~l~~~~-~- 203 (312)
.++.+++.. .. .+.+.++++.+++.+.++++||....... ..+...++++ .+|++++|..|++.|+|.. .
T Consensus 58 ~a~~lvi~~G~~~~~~~~~~~~~~~~a~~~~~pvVlDp~g~~~~~~~~~~~~~ll~~~~~~vitPN~~E~~~L~g~~~~~ 137 (272)
T 1ekq_A 58 IAGALVLNIGTLSKESVEAMIIAGKSANEHGVPVILDPVGAGATPFRTESARDIIREVRLAAIRGNAAEIAHTVGVTDWL 137 (272)
T ss_dssp HSSEEEEECTTCCHHHHHHHHHHHHHHHHTTCCEEEECTTBTTBHHHHHHHHHHHHHSCCSEEEECHHHHHHHCC-----
T ss_pred hCCEEEEECCCCCHHHHHHHHHHHHHHHhcCCeEEEeCCCcCcccchHHHHHHHHccCCCeEECCCHHHHHHHhCCCccc
Confidence 456665532 22 25566777777888999999997532111 1223456777 8999999999999999865 2
Q ss_pred -------CCH-------HHHhhcCCEEEEeeCCCceEEEecCCceEEcCCcccCCcCCCCCchhhhHHHHHHHHHcCCCH
Q psy8856 204 -------LSL-------QKINEQVKVLIVTRGELGSDIFLNNERKIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNLDW 269 (312)
Q Consensus 204 -------~~~-------~~l~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~ag~~~~l~~g~~~ 269 (312)
.+. +++.+....+|++.|..+ +++++ ++.+++++.... +.|++|+||+|.|.+.+.+++|.++
T Consensus 138 ~~gvd~~~~~~~~~~aa~~l~~~~~~vVv~~G~~~-~i~~~-~~~~~~~~~~~~-~~~ttGaGD~lag~iaa~la~g~~~ 214 (272)
T 1ekq_A 138 IKGVDAGEGGGDIIRLAQQAAQKLNTVIAITGEVD-VIADT-SHVYTLHNGHKL-LTKVTGAGCLLTSVVGAFCAVEENP 214 (272)
T ss_dssp ----------HHHHHHHHHHHHHHTSEEEECSSSE-EEECS-SCEEEECCCCGG-GGGSTTHHHHHHHHHHHHHTTCSSH
T ss_pred ccCccCCCCHHHHHHHHHHHHHHcCCEEEEECCCC-EEEeC-CEEEEEcCCCcc-ccCccCchHHHHHHHHHHHhcCCCH
Confidence 111 223332233444448877 56666 777888876654 7799999999988888888889999
Q ss_pred HHHHHHHHH
Q psy8856 270 YTTGRLSSL 278 (312)
Q Consensus 270 ~~a~~~a~a 278 (312)
.+|+++|.+
T Consensus 215 ~~A~~~A~~ 223 (272)
T 1ekq_A 215 LFAAIAAIS 223 (272)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999996
No 61
>3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae}
Probab=99.46 E-value=2.5e-13 Score=127.80 Aligned_cols=133 Identities=12% Similarity=0.102 Sum_probs=96.7
Q ss_pred HHHHHHHHHHHhcCCcEEEcCCCCc----ccCC---HHHHH-HHhhcccEEEeCHHHHHHhhcCC--CCCH-------HH
Q psy8856 146 CNMIKHIKKILKLKIPFIFDPGQSL----SMFT---KEELI-KIIKKSSYIIVNEYESKLLVSKT--SLSL-------QK 208 (312)
Q Consensus 146 ~~~~~~~~~~~~~~~~v~~D~~~~~----~~~~---~~~l~-~ll~~~dvl~~n~~E~~~l~~~~--~~~~-------~~ 208 (312)
+.+.++++..++.+.++++||.... ..+. .+.+. ++++.+||+++|..|++.|+|.. ..+. +.
T Consensus 106 ~~v~~~l~~~~~~~~~vVlDPvm~a~~g~~l~~~~~~~~l~~~Ll~~a~iitPN~~Ea~~L~g~~~~i~~~~d~~~aa~~ 185 (550)
T 3rm5_A 106 EVLHEKLLQLGENRPKLVVDPVLVATSGSSLAGKDIVSLITEKVAPFADILTPNIPECYKLLGEERKVNGLQDIFQIAKD 185 (550)
T ss_dssp HHHHHHHHHHGGGSCEEEECCCC---------CTTHHHHHHHHTGGGCSEECCBHHHHHHHHSCCCCCCSSHHHHHHHHH
T ss_pred HHHHHHHHHhcccCCCEEEecceecCCCCcCCCHHHHHHHHHHhhCcceEEecCHHHHHHHhCCCCCCCCHHHHHHHHHH
Confidence 4555556555556889999997532 2222 22344 68899999999999999999963 1221 22
Q ss_pred Hhh-cC-CEEEEeeCCCc--------e--EEEe-cCCceEEcCCcccCCcCCCCCchhhhHHHHHHHHHcCCCHHHHHHH
Q psy8856 209 INE-QV-KVLIVTRGELG--------S--DIFL-NNERKIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRL 275 (312)
Q Consensus 209 l~~-g~-~~vvvt~G~~G--------~--~~~~-~~~~~~~~~~~~~~~~vdt~GaGDaf~ag~~~~l~~g~~~~~a~~~ 275 (312)
+.+ +. +.|+||.|..+ + +++. ++++.++++.++++ +++|+|+||+|.|++++.+++|.++.+|+++
T Consensus 186 L~~~g~~~~VvvkgG~~~~~g~~~~~~~d~l~~~~~~~~~~~~~~~v~-~~~t~GtGD~fsaaiaa~La~G~~l~eAv~~ 264 (550)
T 3rm5_A 186 LAKITKCSNILVKGGHIPWNDEKEKYITDVLFLGAEQKFIIFKGNFVN-TTHTHGTGCTLASAIASNLARGYSLPQSVYG 264 (550)
T ss_dssp HHHHHCCSCEEEEECC-------CCEEEEEEEETTTTEEEEEEEECCC-CSCCBTHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHhCCCCEEEEeCCCCCcccCCCCeEEEEEEEcCCCeEEEEEecCcC-CCCCcChhHHHHHHHHHHHHcCCCHHHHHHH
Confidence 333 55 89999998763 3 4553 32667788888876 7899999999999999999999999999999
Q ss_pred HHHH
Q psy8856 276 SSLM 279 (312)
Q Consensus 276 a~a~ 279 (312)
|++.
T Consensus 265 A~~~ 268 (550)
T 3rm5_A 265 GIEY 268 (550)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9963
No 62
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A
Probab=98.97 E-value=3.5e-09 Score=90.28 Aligned_cols=146 Identities=13% Similarity=0.049 Sum_probs=98.1
Q ss_pred CCceEEEECCCCh-----HHHHHHHHHHHhcCCcEEEcCCCCccc-CCHHHHHHHhh-cccEEEeCHHHHHHhhcCCC--
Q psy8856 133 ADIKIAIISPDNC-----CNMIKHIKKILKLKIPFIFDPGQSLSM-FTKEELIKIIK-KSSYIIVNEYESKLLVSKTS-- 203 (312)
Q Consensus 133 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~v~~D~~~~~~~-~~~~~l~~ll~-~~dvl~~n~~E~~~l~~~~~-- 203 (312)
..++.+.+.+... +.+..+++.+++.+.++++||...... +..+...++++ .++++++|..|++.|+|...
T Consensus 55 ~~~dalvi~~G~~~~~~~~~~~~~~~~a~~~~~pvVlDpv~~~~~~~~~~~~~~ll~~~~~vITPN~~E~~~L~g~~~~~ 134 (265)
T 1v8a_A 55 RLADAVVINIGTLDSGWRRSMVKATEIANELGKPIVLDPVGAGATKFRTRVSLEILSRGVDVLKGNFGEISALLGEEGKT 134 (265)
T ss_dssp HHCSEEEEECTTCCHHHHHHHHHHHHHHHHHTCCEEEECTTBTTBHHHHHHHHHHHHHCCSEEEEEHHHHHHHHHHHC--
T ss_pred HHCCEEEEEECCCCHHHHHHHHHHHHHHHHcCCcEEEcCccccccccCHHHHHHHHHhCCcEEcCCHHHHHHHhCCcccc
Confidence 4567777765432 244456667778899999999853211 11223345554 39999999999999987541
Q ss_pred --C-----C-------HHHHhh-cCCEEEEeeCCCceEEEecCCceEEcCCcccCCcCCCCCchhhhHHHHHHHHHcCCC
Q psy8856 204 --L-----S-------LQKINE-QVKVLIVTRGELGSDIFLNNERKIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNLD 268 (312)
Q Consensus 204 --~-----~-------~~~l~~-g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~ag~~~~l~~g~~ 268 (312)
. . .+++.+ +...|++| |..+ +++++ ++.+.++..... ..+++|+||+|.|.+.+.+++|.+
T Consensus 135 ~gvd~~~~~~~~~~~aa~~la~~~~~~Vvlk-G~~d-~i~~~-~~~~~~~~g~~~-~~~~~GtGD~Lsg~iaa~lA~g~~ 210 (265)
T 1v8a_A 135 RGVDSLEYGEEEAKKLTMNAAREFNTTVAVT-GAVD-YVSDG-RRTFAVYNGHEL-LGRVTGTGCMVAALTGAFVAVTEP 210 (265)
T ss_dssp --------CHHHHHHHHHHHHHHTTSEEEEE-SSSE-EEECS-SCEEEECCCCGG-GGGSTTHHHHHHHHHHHHHTTSCH
T ss_pred cCcCcccccHHHHHHHHHHHHHHhCcEEEEc-CCCc-EEEcC-CEEEEEcCCCcC-cCCccChhHHHHHHHHHHHhcCCC
Confidence 0 1 122333 33445555 8766 45566 777888876543 569999999999999999999999
Q ss_pred HHHHHHHHHHHhchh
Q psy8856 269 WYTTGRLSSLMGSTE 283 (312)
Q Consensus 269 ~~~a~~~a~a~aa~~ 283 (312)
.+|+..|...-+.+
T Consensus 211 -~~Aa~~a~~~~~~A 224 (265)
T 1v8a_A 211 -LKATTSALVTFGIA 224 (265)
T ss_dssp -HHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHH
Confidence 88888877654443
No 63
>3rpz_A ADP/ATP-dependent NAD(P)H-hydrate dehydratase; structural genomics, PSI-biology; HET: AMP NPW; 1.51A {Bacillus subtilis} PDB: 3rph_A* 3rq2_A* 3rq5_A* 3rq6_A* 3rq8_A* 3rqh_A* 3rqq_A* 3rqx_A* 1kyh_A
Probab=98.73 E-value=6.5e-08 Score=82.71 Aligned_cols=165 Identities=12% Similarity=0.083 Sum_probs=104.9
Q ss_pred cCCceEEEECCCCh--HHHHHHHHHHHhcCCcEEEcCCCCcccCCHHHHHHHhhcccEEEeCHHHHHHhhcCCCC----C
Q psy8856 132 NADIKIAIISPDNC--CNMIKHIKKILKLKIPFIFDPGQSLSMFTKEELIKIIKKSSYIIVNEYESKLLVSKTSL----S 205 (312)
Q Consensus 132 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~v~~D~~~~~~~~~~~~l~~ll~~~dvl~~n~~E~~~l~~~~~~----~ 205 (312)
+..++.+.+.+-.. +...++++.+.+.+.++++|...... +.+ ......+|+++|..|++.|++.... +
T Consensus 96 l~~~davviGPGlg~~~~~~~~~~~~l~~~~p~VlDAdal~~----~~l-~~~~~~~vlTPN~~E~~~L~g~~~~~~~~d 170 (279)
T 3rpz_A 96 EETYRAIAIGPGLPQTESVQQAVDHVLTADCPVILDAGALAK----RTY-PKREGPVILTPHPGEFFRMTGVPVNELQKK 170 (279)
T ss_dssp SSCCSEEEECTTCCCCHHHHHHHHHHTTSSSCEEECGGGCCS----CCC-CCCSSCEEECCCHHHHHHHHCCCHHHHTTS
T ss_pred ccCCCEEEECCCCCCCHHHHHHHHHHHhhCCCEEEECCccch----hhh-hhccCCEEEecCHHHHHHHhCCCccchHHH
Confidence 35778888876543 45567777777788899999864321 000 0123568999999999999986521 1
Q ss_pred ----HHHHhhcCCEEEEeeCCCceEEEecCCceEEcCCcccCCcCCCCCchhhhHHHHHHHHHcCCCHHHHHHHHHH---
Q psy8856 206 ----LQKINEQVKVLIVTRGELGSDIFLNNERKIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSSL--- 278 (312)
Q Consensus 206 ----~~~l~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~a--- 278 (312)
.+++.+....+|+-.|. +.+++++ ++.+++...... ...+.|+||++.+.+.+.+++|.++.+|+..|..
T Consensus 171 ~~~aa~~la~~~~~~VvlKG~-~~vi~~~-~g~~~~~~~g~~-~~at~GtGD~Lag~iaa~lA~g~~~~~A~~~a~~lh~ 247 (279)
T 3rpz_A 171 RAEYAKEWAAQLQTVIVLKGN-QTVIAFP-DGDCWLNPTGNG-ALAKGGTGDTLTGMILGMLCCHEDPKHAVLNAVYLHG 247 (279)
T ss_dssp HHHHHHHHHHHHTSEEEECST-TCEEECT-TSCEEECCCCCG-GGCSTTHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCeEEEEeCC-CcEEECC-CceEEEeCCCCC-CCCCCChHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Confidence 12344323345555664 4567776 544445444443 6789999998755555556799999999999875
Q ss_pred -HhchheeeccCCCCCCChHHHHHHHHHh
Q psy8856 279 -MGSTEISHQGGQKHCPSLSEIDQRFKEA 306 (312)
Q Consensus 279 -~aa~~~~~~g~~~~~~~~~ev~~~~~~~ 306 (312)
++-....+.|.. -....|+.+.+.+.
T Consensus 248 ~Ag~~a~~~~g~~--~~~a~dl~~~lp~~ 274 (279)
T 3rpz_A 248 ACAELWTDEHSAH--TLLAHELSDILPRV 274 (279)
T ss_dssp HHHHHHHHHSCTT--SCCHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCC--CcCHHHHHHHHHHH
Confidence 333334445544 35667777766543
No 64
>3bgk_A SMU.573, putative uncharacterized protein; alpha/beta three layer sandwich, unknown function; 2.50A {Streptococcus mutans}
Probab=98.72 E-value=4.6e-08 Score=85.14 Aligned_cols=158 Identities=14% Similarity=0.151 Sum_probs=95.5
Q ss_pred CceEEEECCCC---h---HHHHHHHHHHHhcCCcEEEcCCCCcccCCHHHHHH---H-h-hcccEEEeCHHHHHHhhcCC
Q psy8856 134 DIKIAIISPDN---C---CNMIKHIKKILKLKIPFIFDPGQSLSMFTKEELIK---I-I-KKSSYIIVNEYESKLLVSKT 202 (312)
Q Consensus 134 ~~~~~~~~~~~---~---~~~~~~~~~~~~~~~~v~~D~~~~~~~~~~~~l~~---l-l-~~~dvl~~n~~E~~~l~~~~ 202 (312)
.++.+.+.+-. . +.+.++++..+ .+.++++|+... ..+.. + + +..+|+++|..|++.|++..
T Consensus 125 ~~dav~IG~Gl~~~~~~~~~v~~~l~~~~-~~~pvVlDa~g~------~ll~~~~~l~L~~~~~viTPN~~E~~~L~g~~ 197 (311)
T 3bgk_A 125 AADVVLMGPGLAEDDLAQTTFDVVWQAIE-PKQTLIIDGSAI------NLLAKRKPAIWPTKQIILTPHQKEWERLSGLT 197 (311)
T ss_dssp HCSEEEECTTCCSSHHHHHHHHHHHHHCC-TTSEEEEETHHH------HHHHHCC-CCCSCSCEEEECCSCC-CTTTCCC
T ss_pred cCCEEEEcCCCCCCHHHHHHHHHHHHHcC-CCCeEEEeCChh------hhhccChhhcCCCCCEEECCcHHHHHHHhCCC
Confidence 55677777522 1 23333333222 378999999431 11111 1 3 46789999999999999865
Q ss_pred CCCH-HHH----hhcC--CEEEEeeCCCceEEEecCCceEEcCCcccCCcCCCCCchhhhHHHHHHHH-Hc-CCCHHHHH
Q psy8856 203 SLSL-QKI----NEQV--KVLIVTRGELGSDIFLNNERKIKIPCVKADRIVDPTGCGDAFRSGVLFGI-IN-NLDWYTTG 273 (312)
Q Consensus 203 ~~~~-~~l----~~g~--~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~ag~~~~l-~~-g~~~~~a~ 273 (312)
..+. ++. .+.. ..+|+..| .+.+++++ +.. ++...... ..++.|+||+| +|+++++ ++ |.++.+|+
T Consensus 198 ~~~~~~d~~~~aa~~l~~g~~VvlkG-~~~~i~~~-~~~-~~~~~~~~-~~~t~GtGD~L-ag~iaa~lA~~g~~~~eA~ 272 (311)
T 3bgk_A 198 IPEQIEAATQTALAHFPKETILVAKS-HQTKIYQG-QKI-GHIQVGGP-YQATGGMGDTL-AGMIAGFVAQFHTDRFEVA 272 (311)
T ss_dssp STTCCHHHHHHHHTTSCTTCEEEECS-SSCEEEET-TEE-EEECCCCG-GGCSTTHHHHH-HHHHHHHHHHCCSCHHHHH
T ss_pred CCcchhhHHHHHHHHHhcCCEEEEeC-CCeEEEEC-CEE-EEECCCCC-CCCCCcHHHHH-HHHHHHHHHccCCCHHHHH
Confidence 3322 122 2211 44556566 56667764 554 44444554 67899999997 6666665 69 99999999
Q ss_pred HHHHHHhchheeec---cCCCCCCChHHHHHHHHHh
Q psy8856 274 RLSSLMGSTEISHQ---GGQKHCPSLSEIDQRFKEA 306 (312)
Q Consensus 274 ~~a~a~aa~~~~~~---g~~~~~~~~~ev~~~~~~~ 306 (312)
++|..+.+..-... | . -....++.+.+.+.
T Consensus 273 ~~A~~~~~~ag~~a~~~g-~--~~~a~dl~~~l~~~ 305 (311)
T 3bgk_A 273 AAAVFLHSYIADQLSKEA-Y--VVLPTRISAEITRV 305 (311)
T ss_dssp HHHHHHHHHHHHHHHTTC-S--SCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhC-C--CCCHHHHHHHHHHH
Confidence 99987776643321 4 2 24666676665543
No 65
>2r3b_A YJEF-related protein; putative kinase in the ribokinase-like superfamily, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Enterococcus faecalis} PDB: 2r3e_A
Probab=98.70 E-value=8e-08 Score=83.58 Aligned_cols=157 Identities=13% Similarity=0.066 Sum_probs=94.3
Q ss_pred CceEEEECCCCh------HHHHHHHHHHHhcCCcEEEcCCCCcccCCHHHHHH---Hh--hcccEEEeCHHHHHHhhcCC
Q psy8856 134 DIKIAIISPDNC------CNMIKHIKKILKLKIPFIFDPGQSLSMFTKEELIK---II--KKSSYIIVNEYESKLLVSKT 202 (312)
Q Consensus 134 ~~~~~~~~~~~~------~~~~~~~~~~~~~~~~v~~D~~~~~~~~~~~~l~~---ll--~~~dvl~~n~~E~~~l~~~~ 202 (312)
.++.+.+.+-.. +.+.++++..+ .+.++++|+... ..+.. ++ +..+|+++|..|++.|++..
T Consensus 111 ~~dav~IG~Gl~~~~~~~~~v~~~l~~~~-~~~pvVlDa~g~------~ll~~~~~~l~~~~~~viTPN~~E~~~L~g~~ 183 (310)
T 2r3b_A 111 QADVILIGPGLGLDATAQQILKMVLAQHQ-KQQWLIIDGSAI------TLFSQGNFSLTYPEKVVFTPHQMEWQRLSHLP 183 (310)
T ss_dssp HCSEEEECTTCCSSHHHHHHHHHHHHHCC-TTCEEEEETHHH------HHHHHTTCCCSSGGGEEEECCHHHHHHHHCCC
T ss_pred cCCEEEEeCCCCCCHHHHHHHHHHHHhcC-CCCcEEEcCCcc------hhcccchhhhcCCCCEEEcCCHHHHHHHhCCC
Confidence 456777775221 23333333222 478999999531 01111 12 46789999999999999865
Q ss_pred CCCH-----HHHhhcCCEEEEeeCCCceEEEecCCceEEcCCcccCCcCCCCCchhhhHHHHHHHH-HcCCCHHHHHHHH
Q psy8856 203 SLSL-----QKINEQVKVLIVTRGELGSDIFLNNERKIKIPCVKADRIVDPTGCGDAFRSGVLFGI-INNLDWYTTGRLS 276 (312)
Q Consensus 203 ~~~~-----~~l~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~ag~~~~l-~~g~~~~~a~~~a 276 (312)
..+. .+..+....+|+..| .+.+++++ +..+. ...... ..++.|+||++ +|+++++ ++|.++.+|+.+|
T Consensus 184 ~~~~~~~~a~~aA~~lg~~VvlKG-~~~vi~~~-~~~~~-~~~g~~-~~~t~GtGD~L-ag~Iaa~lA~g~~~~eA~~~A 258 (310)
T 2r3b_A 184 IEQQTLANNQRQQAKLGSTIVLKS-HRTTIFHA-GEPFQ-NTGGNP-GMATGGTGDTL-AGIIAGFLAQFKPTIETIAGA 258 (310)
T ss_dssp GGGCCHHHHHHHHHHHTSEEEECS-TTCEEECS-SSCEE-CCCCCG-GGCSTTHHHHH-HHHHHHHHHHSCSSHHHHHHH
T ss_pred CCcccchHHHHHHHHhCcEEEEeC-CceEEEEC-CEEEE-ECCCCC-CCCCCChHHHH-HHHHHHHHHcCCCHHHHHHHH
Confidence 3221 222232234566666 56666664 55544 444444 67899999997 5566655 6999999999999
Q ss_pred HHHhchheeec---cCCCCCCChHHHHHHHHH
Q psy8856 277 SLMGSTEISHQ---GGQKHCPSLSEIDQRFKE 305 (312)
Q Consensus 277 ~a~aa~~~~~~---g~~~~~~~~~ev~~~~~~ 305 (312)
..+.+..-... | . -....++.+.+.+
T Consensus 259 ~~~~~~ag~~a~~~g-~--~~~a~dl~~~l~~ 287 (310)
T 2r3b_A 259 VYLHSLIGDDLAKTD-Y--VVLPTKISQALPT 287 (310)
T ss_dssp HHHHHHHHHHHTTTC-S--SCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhC-C--CCCHHHHHHHHHH
Confidence 87766643321 3 2 2455566554443
No 66
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=98.63 E-value=2.3e-07 Score=85.73 Aligned_cols=166 Identities=15% Similarity=0.147 Sum_probs=105.4
Q ss_pred cCCceEEEECCCCh--HHHHHHHH-HHHhcCCcEEEcCCCCcccCCHHHHHHHhhcccEEEeCHHHHHHhhcCCCC----
Q psy8856 132 NADIKIAIISPDNC--CNMIKHIK-KILKLKIPFIFDPGQSLSMFTKEELIKIIKKSSYIIVNEYESKLLVSKTSL---- 204 (312)
Q Consensus 132 ~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~v~~D~~~~~~~~~~~~l~~ll~~~dvl~~n~~E~~~l~~~~~~---- 204 (312)
+..++.+.+.+-.. +...++++ .+++.+.++++|+...... ..+ +.+..+..+|+++|..|++.|++....
T Consensus 318 ~~~~davviGpGlg~~~~~~~~~~~~l~~~~~pvVlDadgl~~l-~~~-ll~~~~~~~vlTPN~~E~~~L~g~~~~~~~~ 395 (502)
T 3rss_A 318 SKDVDVVAIGPGLGNNEHVREFVNEFLKTLEKPAVIDADAINVL-DTS-VLKERKSPAVLTPHPGEMARLVKKTVGDVKY 395 (502)
T ss_dssp HTTCSEEEECTTCCCSHHHHHHHHHHHHHCCSCEEECHHHHHTC-CHH-HHHHCSSCEEECCCHHHHHHHHTCCHHHHTT
T ss_pred hccCCEEEEeCCCCCCHHHHHHHHHHHHhcCCCEEEeCcccchh-cHH-HHhccCCCEEEeCCHHHHHHHhCCCccchHH
Confidence 35778888886432 34445554 3455699999999642111 111 112234578999999999999986421
Q ss_pred C---HHHHhhcCCEEEEeeCCCceEEEecCCceEEcCCcccCCcCCCCCchhhhHHHHHHHHHcCCCHHHHHHHHHHHhc
Q psy8856 205 S---LQKINEQVKVLIVTRGELGSDIFLNNERKIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSSLMGS 281 (312)
Q Consensus 205 ~---~~~l~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~a~aa 281 (312)
+ .+++.+....+|+..|. +.+++++ ++.+..+ .... ..+|+|+||+|.+.+.+.+++|.++.+|+.+|..+-+
T Consensus 396 d~~aa~~la~~~~~~VvlKG~-~~vi~~~-~~~~~~~-~g~~-~~at~GsGD~Lag~iaa~lA~g~~~~~Aa~~A~~~hg 471 (502)
T 3rss_A 396 NYELAEEFAKENDCVLVLKSA-TTIVTDG-EKTLFNI-TGNT-GLSKGGSGDVLTGMIAGFIAQGLSPLEASTVSVYLHG 471 (502)
T ss_dssp CHHHHHHHHHHHTSEEEECSS-SEEEECS-SCEEEEC-CCCG-GGSSTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEeCC-CeEEEcC-CEEEEEC-CCCC-ccccCCchHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 1 12343333446666665 4566766 5544444 3333 6789999998877777778899999999999977766
Q ss_pred hh---eeeccCCCCCCChHHHHHHHHHh
Q psy8856 282 TE---ISHQGGQKHCPSLSEIDQRFKEA 306 (312)
Q Consensus 282 ~~---~~~~g~~~~~~~~~ev~~~~~~~ 306 (312)
.+ ..+ |.. -....++.+.+.+.
T Consensus 472 ~Ag~~aa~-g~~--~~~a~dl~~~lp~~ 496 (502)
T 3rss_A 472 FAAELFEQ-DER--GLTASELLRLIPEA 496 (502)
T ss_dssp HHHHTCSS-CGG--GCCHHHHHHHHHHH
T ss_pred HHHHHHhc-CCC--CcCHHHHHHHHHHH
Confidence 54 333 433 35667776665543
No 67
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis}
Probab=98.62 E-value=8.7e-07 Score=75.33 Aligned_cols=144 Identities=11% Similarity=-0.007 Sum_probs=95.2
Q ss_pred CCceEEEECCCC-----hHHHHHHHHHHHhcCCcEEEcCCCCccc-CCHHHHHHHh-hcccEEEeCHHHHHHhhcCCCC-
Q psy8856 133 ADIKIAIISPDN-----CCNMIKHIKKILKLKIPFIFDPGQSLSM-FTKEELIKII-KKSSYIIVNEYESKLLVSKTSL- 204 (312)
Q Consensus 133 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~v~~D~~~~~~~-~~~~~l~~ll-~~~dvl~~n~~E~~~l~~~~~~- 204 (312)
+.++.+.+..-. .+.+...++.+++.+.|+++||...... +..+..++++ ...+|+.+|..|++.|+|....
T Consensus 57 ~~a~alvIn~G~l~~~~~~~~~~a~~~a~~~~~PvVlDPVg~gas~~r~~~~~~Ll~~~~~VItpN~~E~~~L~g~~~~~ 136 (273)
T 3dzv_A 57 QQTSALVLNLGHLSQEREQSLLAASDYARQVNKLTVVDLVGYGASDIRNEVGEKLVHNQPTVVKGNLSEMRTFCQLVSHG 136 (273)
T ss_dssp TTCSEEEEECCSCCHHHHHHHHHHHHHHHHTTCCEEEECTTTTSCHHHHHHHHHHHHTCCSEEEEEHHHHHHHTTCCCC-
T ss_pred HHCCeEEEecCCCChHHHHHHHHHHHHHHHcCCcEEEchhhcCCcccCHHHHHHHHhcCCcEECCCHHHHHHHhCCcccc
Confidence 456666665432 2345566667788899999999853211 1122333443 3789999999999999986421
Q ss_pred ---C--------H---------HHHhhcC--CEEEEeeCCCceEEEecCCceEEcCCcccCCcCCCCCchhhhHHHHHHH
Q psy8856 205 ---S--------L---------QKINEQV--KVLIVTRGELGSDIFLNNERKIKIPCVKADRIVDPTGCGDAFRSGVLFG 262 (312)
Q Consensus 205 ---~--------~---------~~l~~g~--~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~ag~~~~ 262 (312)
+ . +++.+.. ..|++|-+ . -+++++ ++.+.++..... .-.++|.||++.|.+.+.
T Consensus 137 ~GVds~~~~~~~~~~~d~~~aa~~la~~~~~~~VvlkG~-~-D~i~dg-~~~~~~~~G~~~-~~~v~GtGc~Ls~~Iaa~ 212 (273)
T 3dzv_A 137 RGVDGSPLDQSEEAIEELIQALRQQTQKFPQTVFLATGI-Q-DVLVSQ-EQVIVLQNGVPE-LDCFTGTGDLVGALVAAL 212 (273)
T ss_dssp ------CGGGSHHHHHHHHHHHHHHHHHSTTCEEEEESS-S-EEEECS-SCEEEECCCCGG-GGSSTTHHHHHHHHHHHH
T ss_pred cccccccccchhhhhHHHHHHHHHHHHHhCCeEEEEECC-e-eEEEcC-CEEEEeCCCCcc-cCCcCCchHHHHHHHHHH
Confidence 1 0 1233333 45555543 2 355555 677777765443 456799999999999999
Q ss_pred HHcCCCHHHHHHHHHHHh
Q psy8856 263 IINNLDWYTTGRLSSLMG 280 (312)
Q Consensus 263 l~~g~~~~~a~~~a~a~a 280 (312)
+++|.++.+|+..|...-
T Consensus 213 lA~g~~~~~Aa~~A~~~~ 230 (273)
T 3dzv_A 213 LGEGNAPMTAAVAAVSYF 230 (273)
T ss_dssp HHHTCCHHHHHHHHHHHH
T ss_pred HhCCCCHHHHHHHHHHHH
Confidence 999999999998887653
No 68
>3drw_A ADP-specific phosphofructokinase; AMP, GLYC kinase, magnesium, metal-binding, transferase, structural G PSI-2, protein structure initiative; HET: AMP; 1.90A {Pyrococcus horikoshii} PDB: 1u2x_A
Probab=98.11 E-value=3.8e-05 Score=69.72 Aligned_cols=156 Identities=13% Similarity=0.056 Sum_probs=87.6
Q ss_pred ccccCCchHHHHHHHHHhCC-CceEEEEeecChHHHHHHHHHcCCccc----------------------eeeecCCccc
Q psy8856 43 KKEYGGCAGNIAYNLKLLNG-NPLIVSILGKDGSSYLKHLKYLGISNK----------------------YIQKINSMFT 99 (312)
Q Consensus 43 ~~~~GG~~~n~a~~l~~lG~-~~~~~~~vG~d~~~i~~~l~~~gi~~~----------------------~~~~~~~~~t 99 (312)
....||.+.-+|..|+++|. +|.+++..+.. ...+.| ..+|..- .++..-+.+.
T Consensus 113 ~~~~GGnA~imAn~La~lg~~~Vi~~~p~~sk--~~~~ll-~~~i~~p~~e~g~l~l~~~~ea~~~~~~~~iH~I~Ey~~ 189 (474)
T 3drw_A 113 EERLGGQAGIIANTLAGLKIRKVIAYTPFLPK--RLAELF-KKGVLYPVVENGELQFKPIQEAYREGDPLKINRIFEFRK 189 (474)
T ss_dssp EEEEESHHHHHHHHHHHTTCSEEEECCSCCCH--HHHTTS-CTTEEEEEESSSSEEEEEGGGCCCTTCCCCEEEEEEECT
T ss_pred eEecCChHHHHHHHHHHcCCCcEEEecCcCCH--HHHHhc-CCcceeecccCCceeecCchhhhccCCCCCcEEEEEcCC
Confidence 45799999999999999999 57777766543 122222 2222111 0111111112
Q ss_pred ceEEE-----EEecCCCeeEEEeCCccc-cCC-ccccCC-c----CCceEEEECCCC------------h---HHHHHHH
Q psy8856 100 AQCFI-----VTDVNNNQITIFHPGAMQ-LSY-DDNCIN-N----ADIKIAIISPDN------------C---CNMIKHI 152 (312)
Q Consensus 100 ~~~~~-----~~~~~~~~~~~~~~~~~~-~~~-~~~~~~-~----~~~~~~~~~~~~------------~---~~~~~~~ 152 (312)
+..+- ...+..+|++..+...+. .+. .+.+.. + +..+.+++++.. . +...+.+
T Consensus 190 G~~~~~~~~~~~aPraNRfI~s~D~~N~~~l~~~e~f~~~l~e~~~~~d~~vLSGlq~m~~~y~dg~~~~~~l~~~~e~i 269 (474)
T 3drw_A 190 GLKFKLGDETIEIPNSGRFIVSARFESISRIETREDIKPFLGEIGKEVDGAIFSGYQGLRTKYSDGKDANYYLRRAKEDI 269 (474)
T ss_dssp TCEEESSSCEEECCSCEEEEEEECCSGGGCCSCCTTTGGGHHHHHHHCSEEEECCGGGCCSBCTTSCBHHHHHHHHHHHH
T ss_pred CCeeecCCceEEccCCCeEEEEcCCCCHHhccccHHHHHHHHHhhcCCCEEEEeccccccccccccccHHHHHHHHHHHH
Confidence 22222 122333455444443333 222 222221 1 257888888531 1 2223445
Q ss_pred HHHHhcCCcEEEcCCCCcccCCH-HHHHHHhhcccEEEeCHHHHHHhhcC
Q psy8856 153 KKILKLKIPFIFDPGQSLSMFTK-EELIKIIKKSSYIIVNEYESKLLVSK 201 (312)
Q Consensus 153 ~~~~~~~~~v~~D~~~~~~~~~~-~~l~~ll~~~dvl~~n~~E~~~l~~~ 201 (312)
+..+..+.++-+.........-. ..+..+++++|.+-+|++|+..+.+.
T Consensus 270 ~~l~~~~~~iH~E~As~~~~~l~~~i~~~i~p~vDSlGmNEqELa~l~~~ 319 (474)
T 3drw_A 270 IEFKEKDVKIHVEFASVQDRKLRKKIITNILPFVDSVGIDEAEIAQILSV 319 (474)
T ss_dssp HHHHHTTCEEEEECCCCSCHHHHHHHHHHTGGGSSEEEEEHHHHHHHHHH
T ss_pred HHhcCCCCeEEEEeCccccHHHHHHHHHHhcccccccccCHHHHHHHHHH
Confidence 55567899999988764432222 33557889999999999999999875
No 69
>3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii}
Probab=98.06 E-value=2.3e-05 Score=66.11 Aligned_cols=131 Identities=12% Similarity=0.060 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHhcCCcEEEcCCCCccc-CCHHHHHHHh-hcccEEEeCHHHHHHhhcCCCC---------CH-------H
Q psy8856 146 CNMIKHIKKILKLKIPFIFDPGQSLSM-FTKEELIKII-KKSSYIIVNEYESKLLVSKTSL---------SL-------Q 207 (312)
Q Consensus 146 ~~~~~~~~~~~~~~~~v~~D~~~~~~~-~~~~~l~~ll-~~~dvl~~n~~E~~~l~~~~~~---------~~-------~ 207 (312)
+.+....+.+++.++|+++||..-... +..+..++++ ...+++.+|..|+..|.|.... .. +
T Consensus 73 ~~m~~A~~~A~~~~~PvVLDPVg~gas~~R~~~~~~ll~~~~~vIrgN~sEi~~L~g~~~~~~gvds~~~~~~d~~~~a~ 152 (265)
T 3hpd_A 73 RSMVKATEIANELGKPIVLDPVGAGATKFRTRVSLEILSRGVDVLKGNFGEISALLGEEGKTRGVDSLEYGEEEAKKLTM 152 (265)
T ss_dssp HHHHHHHHHHHHHTCCEEEECTTBTTBHHHHHHHHHHHHHCCSEEEEEHHHHHHHHHHHC----------CHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEcCCCCCCcHHHHHHHHHHHhcCCcEEcCCHHHHHHHhcccCCCCCccCccccHHHHHHHHH
Confidence 445556677788999999999863221 1123334444 4789999999999999874321 11 2
Q ss_pred HHhhcCCEEEEeeCCCceEEEecCCceEEcCCcccCCcCCCCCchhhhHHHHHHHHHcCCCHHHHHHHHHHHh
Q psy8856 208 KINEQVKVLIVTRGELGSDIFLNNERKIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSSLMG 280 (312)
Q Consensus 208 ~l~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~a~a 280 (312)
++.+....+|+-.|+. -++.++ ++.+.++.-... .-..+|.||...+.+.+.++++ ++.+|+..|...-
T Consensus 153 ~lA~~~~~vVvlkG~~-d~I~dg-~~~~~~~~G~~~-m~~vtGtGc~Lsg~iaa~lA~~-~~~~Aa~~a~~~~ 221 (265)
T 3hpd_A 153 NAAREFNTTVAVTGAV-DYVSDG-RRTFAVYNGHEL-LGRVTGTGCMVAALTGAFVAVT-EPLKATTSALVTF 221 (265)
T ss_dssp HHHHHTTSEEEEESSS-EEEECS-SCEEEECCCCGG-GGGSTTHHHHHHHHHHHHHTTS-CHHHHHHHHHHHH
T ss_pred HHHHHhCCEEEEeCCC-eEEEcC-CEEEEECCCChH-hhcCCccchHHHHHHHHHHhcC-ChHHHHHHHHHHH
Confidence 2344566666666754 456666 666666654322 2334799998766555555666 6667776665443
No 70
>1ua4_A Glucokinase, ADP-dependent glucokinase; transferase; HET: GLC BGC AMP; 1.90A {Pyrococcus furiosus} SCOP: c.72.1.3
Probab=97.97 E-value=5.9e-05 Score=68.48 Aligned_cols=152 Identities=16% Similarity=0.079 Sum_probs=87.2
Q ss_pred ccCCchHHHHHHHHHhCCCceE--EEEeecChHHHHHHHHHcCCccceeeecC-------------Cccc-ceEEEEEec
Q psy8856 45 EYGGCAGNIAYNLKLLNGNPLI--VSILGKDGSSYLKHLKYLGISNKYIQKIN-------------SMFT-AQCFIVTDV 108 (312)
Q Consensus 45 ~~GG~~~n~a~~l~~lG~~~~~--~~~vG~d~~~i~~~l~~~gi~~~~~~~~~-------------~~~t-~~~~~~~~~ 108 (312)
..||.+..+|..|+.+|.++.+ ++.+|.. ..+.|...+|.. ..... ..+. ...++.+..
T Consensus 109 ~~GGnA~imAn~la~lg~~~vl~~~~~l~~~---~~~lf~~~~i~~--p~~~~~~~~l~~~~e~~~~~~~~iH~I~Ef~~ 183 (455)
T 1ua4_A 109 RMGGQAGIMANLLGGVYGVPVIVHVPQLSRL---QANLFLDGPIYV--PTLENGEVKLIHPKEFSGDEENCIHYIYEFPR 183 (455)
T ss_dssp EEESHHHHHHHHHTTTTCCCEEECCSCCCHH---HHTTSCSSSEEE--EEEETTEEEEECGGGCSCCCCCCEEEEEEECT
T ss_pred ccCCcHHHHHHHHHHcCCCEEEEeCCCCCHH---HHHhcCCCCeEe--ecccCCccccccchhhccCCCCCceEEEEcCC
Confidence 8999999999999999999987 6676643 333333223322 11100 1122 222233332
Q ss_pred ----------CCCeeEEEeCCccccC-CccccCC-c----CCceEEEECCCC-------hHHH---HHHHHHHHhcCCcE
Q psy8856 109 ----------NNNQITIFHPGAMQLS-YDDNCIN-N----ADIKIAIISPDN-------CCNM---IKHIKKILKLKIPF 162 (312)
Q Consensus 109 ----------~~~~~~~~~~~~~~~~-~~~~~~~-~----~~~~~~~~~~~~-------~~~~---~~~~~~~~~~~~~v 162 (312)
..+|++..+...+..+ ..+.+.. + ..++.+++++.. .+.. .+.++.....+.++
T Consensus 184 G~~~~~~~aPraNRfI~s~D~~n~~l~~~e~f~~~l~e~~~~~dl~vlSG~q~l~~~~~~~~~~~~l~~i~~L~~~~~~i 263 (455)
T 1ua4_A 184 GFRVFEFEAPRENRFIGSADDYNTTLFIREEFRESFSEVIKNVQLAILSGLQALTKENYKEPFEIVKSNLEVLNEREIPV 263 (455)
T ss_dssp TCEETTEECSSCEEEEEECCSSGGGTCCCGGGSTTHHHHGGGCSEEEECCGGGCCTTTCHHHHHHHHHHHHHHHHTTCCE
T ss_pred CCeecceeccccceeEEecCCCcccCcccHHHHHHHHhhccCCcEEEEechhcccccchHHHHHHHHHHHHHhcCCCceE
Confidence 2234444443333322 2223322 2 348888888531 1222 22222335678899
Q ss_pred EEcCCCCcccCCHHHHHHHhhcccEEEeCHHHHHHhhcC
Q psy8856 163 IFDPGQSLSMFTKEELIKIIKKSSYIIVNEYESKLLVSK 201 (312)
Q Consensus 163 ~~D~~~~~~~~~~~~l~~ll~~~dvl~~n~~E~~~l~~~ 201 (312)
-+++.+.....-...+..+++++|.+-+|++|+..+...
T Consensus 264 H~ElAs~~~~~~~~~i~~ilp~vDSlGmNE~EL~~l~~~ 302 (455)
T 1ua4_A 264 HLEFAFTPDEKVREEILNVLGMFYSVGLNEVELASIMEI 302 (455)
T ss_dssp EEECCCCCCHHHHHHHHHHGGGCSEEEECHHHHHHHHHH
T ss_pred EEEeCCccCHHHHHHHHhhhccCcccccCHHHHHHHHHH
Confidence 999987554433233338999999999999999988654
No 71
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=97.86 E-value=0.00017 Score=67.29 Aligned_cols=144 Identities=15% Similarity=0.086 Sum_probs=91.7
Q ss_pred ceEEEECCCC---hHHHHHHHHHHHhcCCcEEEcCCCCccc-CCHHHHHHHhh--cccEEEeCHHHHHHhhcCCC-----
Q psy8856 135 IKIAIISPDN---CCNMIKHIKKILKLKIPFIFDPGQSLSM-FTKEELIKIIK--KSSYIIVNEYESKLLVSKTS----- 203 (312)
Q Consensus 135 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~v~~D~~~~~~~-~~~~~l~~ll~--~~dvl~~n~~E~~~l~~~~~----- 203 (312)
++.+++..-. .+.+..+.+.+++.+.|+++||..-... +..+..+++++ ..+|+.+|..|++.|+|...
T Consensus 307 ~~alvin~G~l~~~~~~~~a~~~a~~~~~PvVlDPVg~~a~~~r~~~~~~Ll~~~~~~vItpN~~E~~~L~g~~~~~~~G 386 (540)
T 3nl6_A 307 HATLLLNTGSVAPPEMLKAAIRAYNDVKRPIVFDPVGYSATETRLLLNNKLLTFGQFSCIKGNSSEILGLAELNKERMKG 386 (540)
T ss_dssp TCEEEEESSCSCCHHHHHHHHHHHHTTTCCEEEECTTCTTSHHHHHHHHHHTTSCCCSEEEECHHHHHHHTTC-------
T ss_pred CCeEEEeCCCCCHHHHHHHHHHHHHHcCCCEEEChHHhhcccccHHHHHHHHhhCCCeEECCCHHHHHHHhCCCcccccc
Confidence 5666665322 5666777777888899999999863221 11234566777 78999999999999998542
Q ss_pred CC-------H------HHHhhcCCEEEEeeCCCceEEEec------------------CCceEEcCCcccCCcCCCCCch
Q psy8856 204 LS-------L------QKINEQVKVLIVTRGELGSDIFLN------------------NERKIKIPCVKADRIVDPTGCG 252 (312)
Q Consensus 204 ~~-------~------~~l~~g~~~vvvt~G~~G~~~~~~------------------~~~~~~~~~~~~~~~vdt~GaG 252 (312)
.+ . +++.+....+|+-.|+.- +++++ +++.+.++.-.+.-.-.++|.|
T Consensus 387 Vds~~~~~~~d~~~aA~~lA~~~~~vVvlkG~~D-~I~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~m~~vtGtG 465 (540)
T 3nl6_A 387 VDASSGISNELLIQATKIVAFKYKTVAVCTGEFD-FIADGTIEGKYSLSKGTNGTSVEDIPCVAVEAGPIEIMGDITASG 465 (540)
T ss_dssp -------CCHHHHHHHHHHHHHTTSEEEECSSSE-EEEECCGGGBCCSSSCCSSCCTTSSCEEEEECSCCGGGGSSTTHH
T ss_pred cccccccCHHHHHHHHHHHHHHhCCEEEEcCCCe-EEECCCccccccccccccccccCCccEEEECCCChhhccCccCch
Confidence 01 1 233444445555555432 33332 1344555543311123579999
Q ss_pred hhhHHHHHHHHHcCC---CHHHHHHHHHHH
Q psy8856 253 DAFRSGVLFGIINNL---DWYTTGRLSSLM 279 (312)
Q Consensus 253 Daf~ag~~~~l~~g~---~~~~a~~~a~a~ 279 (312)
|++.+.+.+.++.+. ++.+|+..|...
T Consensus 466 c~Lsg~Iaa~la~~~~~~~~~~Aa~~a~~~ 495 (540)
T 3nl6_A 466 CSLGSTIACMIGGQPSEGNLFHAVVAGVML 495 (540)
T ss_dssp HHHHHHHHHHHHTCCTTCBHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCcCCCCHHHHHHHHHHH
Confidence 999998888888887 688888777654
No 72
>1gc5_A ADP-dependent glucokinase; ALFA/beta sandwichs, induced-fitting, transferase; HET: ADP; 2.30A {Thermococcus litoralis} SCOP: c.72.1.3
Probab=97.57 E-value=0.0012 Score=59.96 Aligned_cols=150 Identities=15% Similarity=0.054 Sum_probs=82.3
Q ss_pred ccCCchHHHHHHHHHhCCCceE--EEEeecChHHHHHHHHHcCCccceeeecCC-------------ccc-ceEEEEEe-
Q psy8856 45 EYGGCAGNIAYNLKLLNGNPLI--VSILGKDGSSYLKHLKYLGISNKYIQKINS-------------MFT-AQCFIVTD- 107 (312)
Q Consensus 45 ~~GG~~~n~a~~l~~lG~~~~~--~~~vG~d~~~i~~~l~~~gi~~~~~~~~~~-------------~~t-~~~~~~~~- 107 (312)
..||.+.-+|..|+.+|.++.+ .+.+| +...+.|...+|.. ....++ .+. ...+..+.
T Consensus 117 ~mGGnAgimAn~la~lg~~~vl~~~~~~s---~~~~~l~~~~~i~~--p~~~~g~l~~~~~~ea~~~~~~~iH~I~Ey~~ 191 (467)
T 1gc5_A 117 RIGGQAGIMANLLGGVYRIPTIVHVPQNP---KLQAELFVDGPIYV--PVFEGNKLKLVHPKDAIAEEEELIHYIYEFPR 191 (467)
T ss_dssp EEESHHHHHHHHHHHTSCCCEEECCSCCC---HHHHTTSCSSSEEE--EEECSSCEEEECGGGSCCSCCCCEEEEEEECS
T ss_pred ccCccHHHHHHHHHhcCCCEEEEcCCCCC---HHHHHhcCCCCeee--eeccCCceecccchhhccCCCCcceEEEEcCC
Confidence 8999999999999999999887 55555 33333343233321 111111 111 12222222
Q ss_pred ---------cCCCeeEEEeCCccccC-CccccC-Cc----CCceEEEECCC-----------Ch----HHHHHHHHHHHh
Q psy8856 108 ---------VNNNQITIFHPGAMQLS-YDDNCI-NN----ADIKIAIISPD-----------NC----CNMIKHIKKILK 157 (312)
Q Consensus 108 ---------~~~~~~~~~~~~~~~~~-~~~~~~-~~----~~~~~~~~~~~-----------~~----~~~~~~~~~~~~ 157 (312)
+..+|++..+...+..+ ..+.+. .+ ...+.+++++. .+ +.+.+.++....
T Consensus 192 G~~~~~~~aPraNRfI~s~D~~N~~l~~~e~f~~~l~e~~~~~dl~vlSG~q~l~~~y~~g~~~~~~l~~~~~~l~~l~~ 271 (467)
T 1gc5_A 192 GFQVFDVQAPRENRFIANADDYNARVYMRREFREGFEEITRNVELAIISGLQVLKEYYPDGTTYKDVLDRVESHLNILNR 271 (467)
T ss_dssp SCEETTEECSSCEEEEEECCSSTTTTCCCHHHHHSHHHHHTTCSEEEECCGGGCCSBCTTSCBHHHHHHHHHHHHHHHHH
T ss_pred CCeecceeccCCceEEEecCCCCccccccHHHHHHHHhhccCCCEEEEechhcccCccCCchhHHHHHHHHHHHHHhhcC
Confidence 22344444443333222 111211 11 45788888753 12 122223333255
Q ss_pred cCCcEEEcCCCCcccCCHHHHHHHhhcccEEEeCHHHHHHhh
Q psy8856 158 LKIPFIFDPGQSLSMFTKEELIKIIKKSSYIIVNEYESKLLV 199 (312)
Q Consensus 158 ~~~~v~~D~~~~~~~~~~~~l~~ll~~~dvl~~n~~E~~~l~ 199 (312)
.+.++-+.........-...+..+++++|.+-+|++|+..+.
T Consensus 272 ~~~~iH~E~As~~~~~l~~~i~~ilp~vDSlGmNEqELa~l~ 313 (467)
T 1gc5_A 272 YNVKSHFEFAYTANRRVREALVELLPKFTSVGLNEVELASIM 313 (467)
T ss_dssp TTCEEEEECCCCCCHHHHHHHHHHGGGCSEEEECHHHHHHHH
T ss_pred CCCeEEEEECCcccHHHHHHHHhhccccccCccCHHHHHHHH
Confidence 788888888765433222333389999999999999999655
No 73
>1l2l_A ADP-dependent glucokinase; ADP glucokinase APO, transferase; 2.00A {Pyrococcus horikoshii} SCOP: c.72.1.3
Probab=97.42 E-value=0.0032 Score=57.02 Aligned_cols=152 Identities=20% Similarity=0.108 Sum_probs=83.7
Q ss_pred ccCCchHHHHHHHHHhCCCceE--EEEeecChHHHHHHHHHcCCccc---------------------eeeecCCcccce
Q psy8856 45 EYGGCAGNIAYNLKLLNGNPLI--VSILGKDGSSYLKHLKYLGISNK---------------------YIQKINSMFTAQ 101 (312)
Q Consensus 45 ~~GG~~~n~a~~l~~lG~~~~~--~~~vG~d~~~i~~~l~~~gi~~~---------------------~~~~~~~~~t~~ 101 (312)
..||.+.-+|..|+.+|.++.+ .+.+|. ...+.|...+|..- .++..-+.+.+.
T Consensus 112 ~mGGnA~imAn~la~lg~~~vl~~~~~~s~---~~~~l~~~~~i~~p~~~~g~l~l~~~~e~~~~~~~~iH~I~Ey~~G~ 188 (457)
T 1l2l_A 112 RMGGQVGIMANLLGGVYGIPVIAHVPQLSE---LQASLFLDGPIYVPTFERGELRLIHPREFRKGEEDCIHYIYEFPRNF 188 (457)
T ss_dssp EEESHHHHHHHHHTTTSCCCEEECCSSCCH---HHHHTSCSSSEEEEC------CEECGGGC----CCCEEECCEECTTC
T ss_pred ccCchHHHHHHHHHHcCCCEEEEcCCCCCH---HHHHhcCCCCeEeeeccCCceeccCchhhccCCCCcceEEEEcCCCC
Confidence 8999999999999999999877 455553 33333332222210 011111111111
Q ss_pred EE-EEEecCCCeeEEEeCCccccC-CccccC-Cc----CCceEEEECCCC-------hH---HHHHHHHHHHhcCCcEEE
Q psy8856 102 CF-IVTDVNNNQITIFHPGAMQLS-YDDNCI-NN----ADIKIAIISPDN-------CC---NMIKHIKKILKLKIPFIF 164 (312)
Q Consensus 102 ~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~----~~~~~~~~~~~~-------~~---~~~~~~~~~~~~~~~v~~ 164 (312)
.+ -...+..+|++..+...+..+ ..+.+. .+ ...+.+++++.. .+ ...+.++.....+.++-+
T Consensus 189 ~~~~~~aPraNRfI~s~D~~N~~l~~~e~f~~~l~e~~~~~d~~vlSG~q~l~~~~~~~~~~~~~~~i~~L~~~~~~iH~ 268 (457)
T 1l2l_A 189 KVLDFEAPRENRFIGAADDYNPILYVREEWIERFEEIAKRSELAIISGLHPLTQENHGKPIKLVREHLKILNDLGIRAHL 268 (457)
T ss_dssp EETTEECSSCEEEEEEECSSGGGTCCCHHHHHSHHHHHTTCSEEEEECCTTCCTTTCHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred eecceecCCCCeEEEEcCCCCCCCcccHHHHHHHHhhccCCCEEEEeccccccccchhhhHHHHHHHHHHhcCCCCeEEE
Confidence 11 112233345555444333332 122221 12 458888888641 11 122333344667889888
Q ss_pred cCCCCcccCCHHHHHHHhhcccEEEeCHHHHHHhh
Q psy8856 165 DPGQSLSMFTKEELIKIIKKSSYIIVNEYESKLLV 199 (312)
Q Consensus 165 D~~~~~~~~~~~~l~~ll~~~dvl~~n~~E~~~l~ 199 (312)
.........-...+..+++++|.+-+||+|+..+.
T Consensus 269 E~As~~~~~l~~~i~~ilp~vDSlGmNEqELa~l~ 303 (457)
T 1l2l_A 269 EFAFTPDEVVRLEIVKLLKHFYSVGLNEVELASVV 303 (457)
T ss_dssp ECCCCSSHHHHHHHHHHGGGCSEEEECHHHHHHHH
T ss_pred EECCcccHHHHHHHHhhccccccCccCHHHHHHHH
Confidence 88765433222333389999999999999999863
No 74
>3k5w_A Carbohydrate kinase; 11206B,helicobacter pylori,PSI-II, NYSGXRC, , structural genomics, protein structure initiative; 2.60A {Helicobacter pylori}
Probab=97.35 E-value=0.0017 Score=59.51 Aligned_cols=159 Identities=13% Similarity=0.137 Sum_probs=95.5
Q ss_pred CCceEEEECCCCh---HHHHHHHHHHHhcCCcEEEcCCCCcccCCHHHHHHHhhcccEEEeCHHHHHHhhcC-----CCC
Q psy8856 133 ADIKIAIISPDNC---CNMIKHIKKILKLKIPFIFDPGQSLSMFTKEELIKIIKKSSYIIVNEYESKLLVSK-----TSL 204 (312)
Q Consensus 133 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~v~~D~~~~~~~~~~~~l~~ll~~~dvl~~n~~E~~~l~~~-----~~~ 204 (312)
..++.+.+-|-.- ..+.+++ +.+ ++++|...-. . ..+.++++...|+.+|..|++.|++. ...
T Consensus 291 ~~~~a~~iGPGlG~~~~~l~~~l----~~~-p~VlDADaL~---~-~~~~~~~~~~~VlTPh~~E~~rL~g~~~~~v~~~ 361 (475)
T 3k5w_A 291 NLLSAFALGMGLENIPKDFNRWL----ELA-PCVLDAGVFY---H-KEILQALEKEAVLTPHPKEFLSLLNLVGINISML 361 (475)
T ss_dssp SSCSEEEECTTCSSCCTTHHHHH----HHS-CEEEEGGGGG---S-GGGGTTTTSSEEEECCHHHHHHHHHHTSCCCCTT
T ss_pred cCCCEEEEcCCCCCCHHHHHHHH----hcC-CEEEECcccC---C-chhhhccCCCEEECCCHHHHHHHhCCccCCCCcc
Confidence 4567776654321 1133333 235 9999985321 0 11223345568999999999999975 211
Q ss_pred C--------HHHHhhcC-CEEEEeeCCCceEEEecCCceEEcCCcccCCcCCCCCchhhhHHHHHHHHHcCCCHHHHHHH
Q psy8856 205 S--------LQKINEQV-KVLIVTRGELGSDIFLNNERKIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRL 275 (312)
Q Consensus 205 ~--------~~~l~~g~-~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~ag~~~~l~~g~~~~~a~~~ 275 (312)
+ .+++.+.. ..+|+-.|.. ..++++ ++.+..+.-.. -..|.|.||++.+.+.+.+++|.++.+|+..
T Consensus 362 ~~~~d~~~aa~~la~~~g~~~VvlKG~~-~vI~~~-~~~~~~~~g~~--~mat~GtGdvLsg~Iaa~lA~g~~~~~Aa~~ 437 (475)
T 3k5w_A 362 ELLDNKLEIARDFSQKYPKVVLLLKGAN-TLIAHQ-GQVFINILGSV--ALAKAGSGDVLAGLILSLLSQNYTPLDAAIN 437 (475)
T ss_dssp SGGGSCC--CHHHHHHCTTEEEEECSSS-EEEEET-TEEEEECCCCG--GGCSTTHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHcCCeEEEEeCCC-CEEECC-CEEEEECCCCC--CCCCCCHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 1 13455544 5555555544 345554 65555444322 3568999999999998899999999999888
Q ss_pred HHHHhchheeec-cCCCCCCChHHHHHHHHHh
Q psy8856 276 SSLMGSTEISHQ-GGQKHCPSLSEIDQRFKEA 306 (312)
Q Consensus 276 a~a~aa~~~~~~-g~~~~~~~~~ev~~~~~~~ 306 (312)
|...-+..-... +.. -..-.++.+.+.+.
T Consensus 438 a~~lhg~ag~~a~~~~--~~~a~dl~~~l~~~ 467 (475)
T 3k5w_A 438 ASLAHALASLEFKNNY--ALTPLDLIEKIKQL 467 (475)
T ss_dssp HHHHHHHGGGGCSSTT--CCCHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhccCC--CcCHHHHHHHhhhh
Confidence 765544332222 222 35677777776653
No 75
>2yxh_A MAZG-related protein; TM0360, LEFT-handed superhelix fold, structural genomics; 2.00A {Thermotoga maritima}
Probab=47.05 E-value=67 Score=22.73 Aligned_cols=55 Identities=18% Similarity=0.094 Sum_probs=38.0
Q ss_pred chhhhHHHHHHHHHc----CCCHHHHHHHHHHHhchheee-ccCCCCCCChHHHHHHHHHhh
Q psy8856 251 CGDAFRSGVLFGIIN----NLDWYTTGRLSSLMGSTEISH-QGGQKHCPSLSEIDQRFKEAF 307 (312)
Q Consensus 251 aGDaf~ag~~~~l~~----g~~~~~a~~~a~a~aa~~~~~-~g~~~~~~~~~ev~~~~~~~~ 307 (312)
.||.+...+.++... |.+++++++.++.==..--.+ .+.. .++.+|+.++.++..
T Consensus 54 lGDlLf~vv~la~~~~~~~~~d~e~al~~~~~K~~rR~~~v~~~~--~~~~~e~~~~W~~~K 113 (116)
T 2yxh_A 54 IGDMIYDALLVAAVAQRDYGIDLESAIQKVVEKISHRKPWLFWEE--KISLEEAEKIWKERK 113 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCGGGGCSS--CCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHcCCCCHHHHHHHHHHHHHHHhHHHhCCC--CCCHHHHHHHHHHHH
Confidence 699999999999876 999999998766532221111 1222 238999998887653
No 76
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=37.73 E-value=23 Score=28.80 Aligned_cols=26 Identities=12% Similarity=0.015 Sum_probs=22.6
Q ss_pred cccCCchHHHHHHHHHhCCCceEEEE
Q psy8856 44 KEYGGCAGNIAYNLKLLNGNPLIVSI 69 (312)
Q Consensus 44 ~~~GG~~~n~a~~l~~lG~~~~~~~~ 69 (312)
.+-|+-|..+|.++.+.|.+|.+++.
T Consensus 26 ~SSG~mG~aiA~~~~~~Ga~V~lv~~ 51 (232)
T 2gk4_A 26 HSTGHLGKIITETLLSAGYEVCLITT 51 (232)
T ss_dssp CCCCHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 34588999999999999999999874
No 77
>3cra_A Protein MAZG; tandem-repeat domain, hydrolase; 2.10A {Escherichia coli} PDB: 3crc_A*
Probab=34.45 E-value=39 Score=27.99 Aligned_cols=57 Identities=9% Similarity=0.016 Sum_probs=38.9
Q ss_pred chhhhHHHHHHHHHcCCCHHHHHHHHHHH-----hch--heeeccCCCCCCChHHHHHHHHHhh
Q psy8856 251 CGDAFRSGVLFGIINNLDWYTTGRLSSLM-----GST--EISHQGGQKHCPSLSEIDQRFKEAF 307 (312)
Q Consensus 251 aGDaf~ag~~~~l~~g~~~~~a~~~a~a~-----aa~--~~~~~g~~~~~~~~~ev~~~~~~~~ 307 (312)
-||.+++....+...|.++++|++.++.- ..+ .+...|......+.+|++.++++..
T Consensus 196 lGDlLFalVnlAR~~gIDpE~ALr~an~KF~~Rf~~~E~~~~~~g~~l~~~sl~e~d~lW~~aK 259 (265)
T 3cra_A 196 MGDLLFATVNLARHLGTKAEIALQKANEKFERRFREVERIVAARGLEMTGVDLETMEEVWQQVK 259 (265)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCC----CCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCHHHHHHHHHHHH
Confidence 69999999999999999999999977642 211 1233454444678888888887754
No 78
>1vmg_A Hypothetical protein SSO3215; 13816655, MAZG nucleotide pyrophosphohydrolase, structural G JCSG, protein structure initiative, PSI; HET: MSE; 1.46A {Sulfolobus solfataricus} SCOP: a.204.1.2
Probab=32.43 E-value=47 Score=22.67 Aligned_cols=26 Identities=12% Similarity=0.050 Sum_probs=23.7
Q ss_pred chhhhHHHHHHHHHcCCCHHHHHHHH
Q psy8856 251 CGDAFRSGVLFGIINNLDWYTTGRLS 276 (312)
Q Consensus 251 aGDaf~ag~~~~l~~g~~~~~a~~~a 276 (312)
-||.+...+..+...|.++++|++.+
T Consensus 67 LgDvLf~lv~lA~~lgiD~e~al~~k 92 (95)
T 1vmg_A 67 LADVIAWTVSIANLEGIDIEEALKKK 92 (95)
T ss_dssp HHHHHHHHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCcCHHHHHHHH
Confidence 59999999999999999999999865
No 79
>2re2_A Uncharacterized protein TA1041; dinitrogenase iron-molybdenum cofactor, structural genomics, center for structural genomics; HET: MSE; 1.30A {Thermoplasma acidophilum dsm 1728}
Probab=31.43 E-value=32 Score=25.12 Aligned_cols=38 Identities=16% Similarity=0.109 Sum_probs=31.2
Q ss_pred CCchHHHHHHHHHhCCCceEEEEeecChHHHHHHHHHcCCcc
Q psy8856 47 GGCAGNIAYNLKLLNGNPLIVSILGKDGSSYLKHLKYLGISN 88 (312)
Q Consensus 47 GG~~~n~a~~l~~lG~~~~~~~~vG~d~~~i~~~l~~~gi~~ 88 (312)
+|.+...+..|+..|+++.+++.+| +...+.|++ ||++
T Consensus 65 ~g~g~~~~~~L~~~gv~~VI~g~iG---~~a~~~L~~-GI~v 102 (136)
T 2re2_A 65 AARGVFMLKSALDHGANALVLSEIG---SPGFNFIKN-KMDV 102 (136)
T ss_dssp SCHHHHHHHHHHHTTCSEEEESCCB---HHHHHHHTT-TSEE
T ss_pred CCccHHHHHHHHHcCCCEEEECCCC---HhHHHHHHC-CCEE
Confidence 5667788888999999999999987 444578888 9975
No 80
>2q5z_A MAZG, hypothetical protein; NTP-ppase, hydrolase; 2.30A {Vibrio SP}
Probab=29.84 E-value=61 Score=22.79 Aligned_cols=28 Identities=14% Similarity=0.087 Sum_probs=25.2
Q ss_pred chhhhHHHHHHHHHcCCCHHHHHHHHHH
Q psy8856 251 CGDAFRSGVLFGIINNLDWYTTGRLSSL 278 (312)
Q Consensus 251 aGDaf~ag~~~~l~~g~~~~~a~~~a~a 278 (312)
-||.+...+..+...|.++++|++..+.
T Consensus 79 LgDvL~~l~~LA~~lgiDle~al~~k~~ 106 (114)
T 2q5z_A 79 LYDVLYYVCALANIHGVNLEKTRELKEV 106 (114)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCcCHHHHHHHHHH
Confidence 6999999999999999999999987654
No 81
>2gta_A Hypothetical protein YPJD; pyrophosphatase, NESG, structural genomics, PSI, protein structure initiative; 2.90A {Bacillus subtilis} SCOP: a.204.1.2
Probab=29.78 E-value=55 Score=23.23 Aligned_cols=28 Identities=11% Similarity=-0.058 Sum_probs=25.4
Q ss_pred chhhhHHHHHHHHHcCCCHHHHHHHHHH
Q psy8856 251 CGDAFRSGVLFGIINNLDWYTTGRLSSL 278 (312)
Q Consensus 251 aGDaf~ag~~~~l~~g~~~~~a~~~a~a 278 (312)
-||.+...+..+...|.++++|++..+.
T Consensus 67 LGDvLf~lv~lA~~l~idle~al~~~~~ 94 (119)
T 2gta_A 67 IGDVLFVLVCLANSLDISLEEAHDRVMH 94 (119)
T ss_dssp HHHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCcCHHHHHHHHHH
Confidence 6999999999999999999999987765
No 82
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=28.52 E-value=68 Score=24.57 Aligned_cols=35 Identities=11% Similarity=-0.169 Sum_probs=27.5
Q ss_pred chHHHHHHHHHhCCCceEEEEeecChHHHHHHHHH
Q psy8856 49 CAGNIAYNLKLLNGNPLIVSILGKDGSSYLKHLKY 83 (312)
Q Consensus 49 ~~~n~a~~l~~lG~~~~~~~~vG~d~~~i~~~l~~ 83 (312)
.+...+..|..+|+++...+.+++|...+.+.+++
T Consensus 24 N~~~l~~~L~~~G~~v~~~~iv~Dd~~~I~~~l~~ 58 (172)
T 3kbq_A 24 NAAFIGNFLTYHGYQVRRGFVVMDDLDEIGWAFRV 58 (172)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHH
Confidence 36778888999999999999999995555554444
No 83
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=28.42 E-value=42 Score=27.39 Aligned_cols=41 Identities=22% Similarity=0.355 Sum_probs=25.6
Q ss_pred cCCchHHHHHHHHHhCCCceEEEEeec-C----hHHHHHHHHHcCCc
Q psy8856 46 YGGCAGNIAYNLKLLNGNPLIVSILGK-D----GSSYLKHLKYLGIS 87 (312)
Q Consensus 46 ~GG~~~n~a~~l~~lG~~~~~~~~vG~-d----~~~i~~~l~~~gi~ 87 (312)
-||.++-+|+.|+..|.+|.++- ++. . ....++.+++.|+.
T Consensus 70 NGGDGlv~AR~L~~~G~~V~v~~-~~~~~~~~~~~~~~~~~~~~g~~ 115 (246)
T 1jzt_A 70 NGGDGLVCARHLKLFGYNPVVFY-PKRSERTEFYKQLVHQLNFFKVP 115 (246)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEC-CCCCTTCHHHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHHCCCeEEEEE-cCCCCCCHHHHHHHHHHHHcCCc
Confidence 37778888888888888877753 332 2 33345556665553
No 84
>2q73_A MAZG, hypothetical protein; NTP-ppase, hydrolase; 1.80A {Vibrio SP} PDB: 2q9l_A
Probab=27.47 E-value=74 Score=21.69 Aligned_cols=29 Identities=14% Similarity=0.111 Sum_probs=25.6
Q ss_pred chhhhHHHHHHHHHcCCCHHHHHHHHHHH
Q psy8856 251 CGDAFRSGVLFGIINNLDWYTTGRLSSLM 279 (312)
Q Consensus 251 aGDaf~ag~~~~l~~g~~~~~a~~~a~a~ 279 (312)
-||.+...+..+...|.++++|++....-
T Consensus 59 LgDvL~~l~~lA~~lgiDle~al~~k~~~ 87 (100)
T 2q73_A 59 LYDVLYYVCALANIHGVNLEKTHELKEVL 87 (100)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCcCHHHHHHHHHHH
Confidence 69999999999999999999999876543
No 85
>1ztd_A Hypothetical protein PFU-631545-001; structural genomics, southeast collaboratory for structural genomics, secsg; 2.00A {Pyrococcus furiosus} SCOP: a.149.1.2
Probab=26.93 E-value=66 Score=22.50 Aligned_cols=33 Identities=12% Similarity=0.012 Sum_probs=27.7
Q ss_pred CCCCCchhhhHHHHHHHHHcC-CCHHHHHHHHHH
Q psy8856 246 VDPTGCGDAFRSGVLFGIINN-LDWYTTGRLSSL 278 (312)
Q Consensus 246 vdt~GaGDaf~ag~~~~l~~g-~~~~~a~~~a~a 278 (312)
.|-.|-||..-|-+.|++..| .+.+||++.=.+
T Consensus 64 ~DKh~kGd~aEA~iAyAWleG~is~eEaveilk~ 97 (133)
T 1ztd_A 64 VDKHAKGDYAEALIAKAWLMGLISEREAVEIIKK 97 (133)
T ss_dssp GGTTCHHHHHHHHHHHHHHTTSSCHHHHHHHHHT
T ss_pred ccccCccHHHHHHHHHHHHhccccHHHHHHHHHh
Confidence 467899999999999999998 489999886443
No 86
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=26.19 E-value=1.1e+02 Score=23.05 Aligned_cols=35 Identities=14% Similarity=-0.024 Sum_probs=27.1
Q ss_pred chHHHHHHHHHhCCCceEEEEeecChHHHHHHHHH
Q psy8856 49 CAGNIAYNLKLLNGNPLIVSILGKDGSSYLKHLKY 83 (312)
Q Consensus 49 ~~~n~a~~l~~lG~~~~~~~~vG~d~~~i~~~l~~ 83 (312)
.+...+..|..+|+++...+.+++|-+.+.+.+++
T Consensus 32 n~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~ 66 (169)
T 1y5e_A 32 SGQLLHELLKEAGHKVTSYEIVKDDKESIQQAVLA 66 (169)
T ss_dssp HHHHHHHHHHHHTCEEEEEEEECSSHHHHHHHHHH
T ss_pred hHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHH
Confidence 35667778888999999999999996556555554
No 87
>1eo1_A Hypothetical protein MTH1175; mixed A/B protein, mixed beta sheet, strand order 321456; NMR {Methanothermobacterthermautotrophicus} SCOP: c.55.5.1
Probab=26.01 E-value=44 Score=23.77 Aligned_cols=39 Identities=26% Similarity=0.231 Sum_probs=31.2
Q ss_pred CCchHHHHHHHHHhCCCceEEEEeecChHHHHHHHHHcCCcc
Q psy8856 47 GGCAGNIAYNLKLLNGNPLIVSILGKDGSSYLKHLKYLGISN 88 (312)
Q Consensus 47 GG~~~n~a~~l~~lG~~~~~~~~vG~d~~~i~~~l~~~gi~~ 88 (312)
+|.+...+..|...|+++.+++.+| ......|++.||.+
T Consensus 51 ~g~g~~~~~~l~~~gv~~vi~~~iG---~~a~~~L~~~GI~v 89 (124)
T 1eo1_A 51 GGAGIRTAQIIANNGVKAVIASSPG---PNAFEVLNELGIKI 89 (124)
T ss_dssp SSCSTTHHHHHHHTTCCEEEECCSS---HHHHHHHHHHTCEE
T ss_pred CCCCHHHHHHHHHCCCCEEEECCcC---HHHHHHHHHCCCEE
Confidence 4556678888999999999999887 44567888889875
No 88
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=25.88 E-value=45 Score=27.64 Aligned_cols=41 Identities=22% Similarity=0.200 Sum_probs=24.8
Q ss_pred cCCchHHHHHHHHHhCCCceEEEEeecC----hHHHHHHHHHcCCc
Q psy8856 46 YGGCAGNIAYNLKLLNGNPLIVSILGKD----GSSYLKHLKYLGIS 87 (312)
Q Consensus 46 ~GG~~~n~a~~l~~lG~~~~~~~~vG~d----~~~i~~~l~~~gi~ 87 (312)
-||.++-+|+.|+..|.+|.++- ++.. ....++.+++.|+.
T Consensus 91 NGGDGlv~AR~L~~~G~~V~V~~-~~~~~~~~~~~~~~~~~~~g~~ 135 (265)
T 2o8n_A 91 NGGDGLVCARHLKLFGYQPTIYY-PKRPNKPLFTGLVTQCQKMDIP 135 (265)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEC-CSCCSSHHHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHHCCCcEEEEE-eCCCCCHHHHHHHHHHHHcCCc
Confidence 36777778888887787777652 2221 33445556665654
No 89
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=25.57 E-value=46 Score=28.69 Aligned_cols=18 Identities=17% Similarity=0.006 Sum_probs=14.2
Q ss_pred hHHHHHHHHHhCCCceEE
Q psy8856 50 AGNIAYNLKLLNGNPLIV 67 (312)
Q Consensus 50 ~~n~a~~l~~lG~~~~~~ 67 (312)
|.-.|..|++.|++|.++
T Consensus 13 Gl~~A~~L~~~G~~v~v~ 30 (412)
T 4hb9_A 13 GTCLAHGLRKHGIKVTIY 30 (412)
T ss_dssp HHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHhCCCCEEEE
Confidence 677788888888887776
No 90
>2dha_A FLJ20171 protein; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.39 E-value=99 Score=21.94 Aligned_cols=41 Identities=15% Similarity=0.011 Sum_probs=29.8
Q ss_pred ccCCchHHHHHHHHHhCCCceEEEEeecC--hHHHHHHHHHcC
Q psy8856 45 EYGGCAGNIAYNLKLLNGNPLIVSILGKD--GSSYLKHLKYLG 85 (312)
Q Consensus 45 ~~GG~~~n~a~~l~~lG~~~~~~~~vG~d--~~~i~~~l~~~g 85 (312)
..||..-.+...+.+-.....+++.+.-+ -+.|.+.+...|
T Consensus 6 ~~~g~~~~~~~~~~~~~~~~v~V~nLp~~~te~dl~~~F~~~g 48 (123)
T 2dha_A 6 SGGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFFGQHC 48 (123)
T ss_dssp SSCCCCHHHHHHHHCCSCCEEEECSCCTTCCHHHHHHHHHTTS
T ss_pred CCCCCchhHHhhccCCCCCEEEEeCCCCCCCHHHHHHHHHhhC
Confidence 44666666666666555667788888777 567899999987
No 91
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=23.33 E-value=53 Score=26.43 Aligned_cols=25 Identities=24% Similarity=0.088 Sum_probs=21.6
Q ss_pred cccCCchHHHHHHHHHhCCCceEEE
Q psy8856 44 KEYGGCAGNIAYNLKLLNGNPLIVS 68 (312)
Q Consensus 44 ~~~GG~~~n~a~~l~~lG~~~~~~~ 68 (312)
.+.||-|.-+|.++++.|.+|.+++
T Consensus 31 ~SSg~iG~aiA~~~~~~Ga~V~l~~ 55 (226)
T 1u7z_A 31 HSSGKMGFAIAAAAARRGANVTLVS 55 (226)
T ss_dssp CCCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCccHHHHHHHHHHHHCCCEEEEEE
Confidence 3458899999999999999998874
No 92
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=23.32 E-value=2e+02 Score=21.70 Aligned_cols=33 Identities=18% Similarity=0.029 Sum_probs=26.7
Q ss_pred hHHHHHHHHHhCCCceEEEEeecChHHHHHHHH
Q psy8856 50 AGNIAYNLKLLNGNPLIVSILGKDGSSYLKHLK 82 (312)
Q Consensus 50 ~~n~a~~l~~lG~~~~~~~~vG~d~~~i~~~l~ 82 (312)
+-..+..|..+|+++...+.+++|-..+.+.+.
T Consensus 42 g~~L~~~L~~~G~~v~~~~iV~Dd~~~i~~al~ 74 (178)
T 3iwt_A 42 GDIIKQLLIENGHKIIGYSLVPDDKIKILKAFT 74 (178)
T ss_dssp HHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHH
T ss_pred HHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHH
Confidence 567888899999999999999999655555544
No 93
>2wfb_A Putative uncharacterized protein ORP; mixed molybdenum-copper sulphide cluster, alpha and beta protein, biosynthetic protein; 2.00A {Desulfovibrio gigas}
Probab=22.66 E-value=43 Score=23.66 Aligned_cols=40 Identities=23% Similarity=0.224 Sum_probs=31.4
Q ss_pred cCCchHHHHHHHHHhCCCceEEEEeecChHHHHHHHHHcCCcc
Q psy8856 46 YGGCAGNIAYNLKLLNGNPLIVSILGKDGSSYLKHLKYLGISN 88 (312)
Q Consensus 46 ~GG~~~n~a~~l~~lG~~~~~~~~vG~d~~~i~~~l~~~gi~~ 88 (312)
.+|.+...+..|+..|+++.+++.+| ....+.|++.||+.
T Consensus 52 ~~g~g~~~~~~l~~~gv~~vi~~~iG---~~a~~~L~~~GI~v 91 (120)
T 2wfb_A 52 SHGAGINAAQVLAKSGAGVLLTGYVG---PKAFQALQAAGIKV 91 (120)
T ss_dssp SSCHHHHHHHHHHHHTEEEEECSCCC---HHHHHHHHHTTCEE
T ss_pred CCCchHHHHHHHHHCCCCEEEECCCC---HhHHHHHHHCCCEE
Confidence 35666678888888999999999887 45567888899875
No 94
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=22.43 E-value=1.1e+02 Score=23.16 Aligned_cols=35 Identities=3% Similarity=-0.053 Sum_probs=26.6
Q ss_pred chHHHHHHHHHhCCCceEEEEeecChHHHHHHHHH
Q psy8856 49 CAGNIAYNLKLLNGNPLIVSILGKDGSSYLKHLKY 83 (312)
Q Consensus 49 ~~~n~a~~l~~lG~~~~~~~~vG~d~~~i~~~l~~ 83 (312)
.+...+..|..+|+++...+.+++|-+.+.+.+++
T Consensus 29 n~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~ 63 (172)
T 1mkz_A 29 SGHYLRDSAQEAGHHVVDKAIVKENRYAIRAQVSA 63 (172)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHH
T ss_pred cHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHH
Confidence 35677888888999999999999985555444443
No 95
>2oie_A RS21-C6; helix, hydrolase; 2.20A {Mus musculus} SCOP: a.204.1.2 PDB: 2oig_A*
Probab=21.39 E-value=83 Score=21.82 Aligned_cols=26 Identities=12% Similarity=-0.081 Sum_probs=23.2
Q ss_pred chhhhHHHHHHHHHcCCCHHHHHHHH
Q psy8856 251 CGDAFRSGVLFGIINNLDWYTTGRLS 276 (312)
Q Consensus 251 aGDaf~ag~~~~l~~g~~~~~a~~~a 276 (312)
-||.+..-+..+...|.++++|++..
T Consensus 81 lgDvL~~l~~lA~~lgiDle~al~~k 106 (111)
T 2oie_A 81 LSDVLIYLVALAARCHVDLPQAVISK 106 (111)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHCcCHHHHHHHH
Confidence 69999999999999999999998743
No 96
>2yx6_A Hypothetical protein PH0822; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=21.20 E-value=57 Score=23.00 Aligned_cols=38 Identities=18% Similarity=0.220 Sum_probs=28.4
Q ss_pred CCchHHHHHHHHHhCCCceEEEEeecChHHHHHHHHHcCCcc
Q psy8856 47 GGCAGNIAYNLKLLNGNPLIVSILGKDGSSYLKHLKYLGISN 88 (312)
Q Consensus 47 GG~~~n~a~~l~~lG~~~~~~~~vG~d~~~i~~~l~~~gi~~ 88 (312)
+|.+ ..+..|...|.++.+++.+| ....+.|++.||.+
T Consensus 50 ~g~g-~~~~~L~~~gv~~vi~~~iG---~~a~~~L~~~GI~v 87 (121)
T 2yx6_A 50 HGPG-DLPNFIKDHGAKIVLTYGIG---RRAIEYFNSLGISV 87 (121)
T ss_dssp ---C-HHHHHHHHTTCCEEECSBCC---HHHHHHHHHTTCEE
T ss_pred CCCC-HHHHHHHHcCCCEEEECCCC---HhHHHHHHHCCCEE
Confidence 3433 77788888899999999887 45567888899875
No 97
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=21.07 E-value=1.6e+02 Score=22.40 Aligned_cols=35 Identities=17% Similarity=0.002 Sum_probs=26.9
Q ss_pred chHHHHHHHHHhCCCceEEEEeecChHHHHHHHHH
Q psy8856 49 CAGNIAYNLKLLNGNPLIVSILGKDGSSYLKHLKY 83 (312)
Q Consensus 49 ~~~n~a~~l~~lG~~~~~~~~vG~d~~~i~~~l~~ 83 (312)
++...+..|..+|+++...+.+++|.+.+.+.+++
T Consensus 41 n~~~L~~~l~~~G~~v~~~~iv~Dd~~~I~~al~~ 75 (178)
T 2pjk_A 41 SGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTD 75 (178)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHH
Confidence 36677788889999999999999995555555544
No 98
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=20.66 E-value=62 Score=26.07 Aligned_cols=54 Identities=15% Similarity=0.159 Sum_probs=38.4
Q ss_pred CCceEEEECCCC-hHHHHHHHHHHHhcCCcEEEcCCCCcccCCHHHHHHHhhcccEEE
Q psy8856 133 ADIKIAIISPDN-CCNMIKHIKKILKLKIPFIFDPGQSLSMFTKEELIKIIKKSSYII 189 (312)
Q Consensus 133 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~D~~~~~~~~~~~~l~~ll~~~dvl~ 189 (312)
.+++++.+.... ..+..+.++.+++.|..+.+++++.-+ .+.++.+++.+|++.
T Consensus 79 aGAd~itvh~Ea~~~~~~~~i~~i~~~G~k~gv~lnp~tp---~~~~~~~l~~~D~Vl 133 (231)
T 3ctl_A 79 AGADFITLHPETINGQAFRLIDEIRRHDMKVGLILNPETP---VEAMKYYIHKADKIT 133 (231)
T ss_dssp HTCSEEEECGGGCTTTHHHHHHHHHHTTCEEEEEECTTCC---GGGGTTTGGGCSEEE
T ss_pred cCCCEEEECcccCCccHHHHHHHHHHcCCeEEEEEECCCc---HHHHHHHHhcCCEEE
Confidence 367888777655 456788899999999988877765322 345567888899753
Done!