Your job contains 1 sequence.
>psy8856
MNSLICGSLAFDNIMRFEGKFSNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLL
NGNPLIVSILGKDGSSYLKHLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIFHPGA
MQLSYDDNCINNADIKIAIISPDNCCNMIKHIKKILKLKIPFIFDPGQSLSMFTKEELIK
IIKKSSYIIVNEYESKLLVSKTSLSLQKINEQVKVLIVTRGELGSDIFLNNERKIKIPCV
KADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSSLMGSTEISHQGGQKHCPSLSEID
QRFKEAFGYRYN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy8856
(312 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|P83734 - symbol:adoK "Adenosine kinase" species... 309 1.3e-27 1
DICTYBASE|DDB_G0280893 - symbol:rbsk "ribokinase" species... 101 1.8e-05 2
UNIPROTKB|P32143 - symbol:yihV "predicted sugar kinase" s... 88 5.5e-05 2
DICTYBASE|DDB_G0292440 - symbol:DDB_G0292440 "carbohydrat... 101 0.00013 2
TAIR|locus:2178883 - symbol:Mik "AT5G58730" species:3702 ... 118 0.00015 1
TAIR|locus:2165361 - symbol:AT5G51830 species:3702 "Arabi... 78 0.00046 2
FB|FBgn0032424 - symbol:CG17010 species:7227 "Drosophila ... 80 0.00063 2
TAIR|locus:2013094 - symbol:AT1G19600 species:3702 "Arabi... 89 0.00076 2
>UNIPROTKB|P83734 [details] [associations]
symbol:adoK "Adenosine kinase" species:1773 "Mycobacterium
tuberculosis" [GO:0000287 "magnesium ion binding" evidence=IDA]
[GO:0004001 "adenosine kinase activity" evidence=IDA] [GO:0005524
"ATP binding" evidence=IDA] [GO:0005525 "GTP binding" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0032567 "dGTP
binding" evidence=IDA] [GO:0042803 "protein homodimerization
activity" evidence=IPI] InterPro:IPR002173 PROSITE:PS00583
PROSITE:PS00584 UniPathway:UPA00588 Pfam:PF00294 GO:GO:0005525
GO:GO:0005886 GO:GO:0005524 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000287 EMBL:BX842579
eggNOG:COG0524 KO:K00856 BRENDA:2.7.1.20 GO:GO:0004001
GO:GO:0016773 GO:GO:0044209 InterPro:IPR011611 GO:GO:0006166
PIR:C70785 RefSeq:NP_216718.1 RefSeq:NP_336730.1
RefSeq:YP_006515622.1 PDB:2PKF PDB:2PKK PDB:2PKM PDB:2PKN
PDBsum:2PKF PDBsum:2PKK PDBsum:2PKM PDBsum:2PKN
ProteinModelPortal:P83734 SMR:P83734 PRIDE:P83734
EnsemblBacteria:EBMYCT00000001556 EnsemblBacteria:EBMYCT00000070207
GeneID:13318891 GeneID:888551 GeneID:924168 KEGG:mtc:MT2258
KEGG:mtu:Rv2202c KEGG:mtv:RVBD_2202c PATRIC:18126718
TubercuList:Rv2202c HOGENOM:HOG000255998 OMA:FTAQAMI
ProtClustDB:CLSK872029 EvolutionaryTrace:P83734 GO:GO:0032567
Uniprot:P83734
Length = 324
Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 90/315 (28%), Positives = 136/315 (43%)
Query: 1 MNSLICGSLAFDNIMRFEGKFSNSLLPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLL 60
M + GS+A D++MRF G+FS LLP+ L K+++SF + GG AGN+A+ + +L
Sbjct: 1 MTIAVTGSIATDHLMRFPGRFSEQLLPEHLHKVSLSFLVDDLVMHRGGVAGNMAFAIGVL 60
Query: 61 NGNPLIVSILGKDGSSYLKHLKYLGISNKYIQKINSMFTAQCFIVTDVNNNQITIFHPGA 120
G +V G D + Y LK G++ ++ + TA+ TDV+ QI F+PGA
Sbjct: 61 GGEVALVGAAGADFADYRDWLKARGVNCDHVLISETAHTARFTCTTDVDMAQIASFYPGA 120
Query: 121 MQLSYDDNCINNADIKIAIISPDNC---CN----MXXXXXXXXXXXXXXXXDPGQSLSMF 173
M + + I AD+ AI P+ N M DP Q L+
Sbjct: 121 MSEARN---IKLADVVSAIGKPELVIIGANDPEAMFLHTEECRKLGLAFAADPSQQLARL 177
Query: 174 TKEELXXXXXXXXXXXVNEYEXXXXXXXXXXXXXXINEQVKVLIVTRGELGSDIFLNNER 233
+ EE+ N+YE + Q+ + + T G G D+ +
Sbjct: 178 SGEEIRRLVNGAAYLFTNDYEWDLLLSKTGWSEADVMAQIDLRVTTLGPKGVDLVEPDGT 237
Query: 234 KIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSSLMGSTEISHQGGQKHC 293
I + V DPTG GDAFR+G L G L + +L SL+ + G Q+
Sbjct: 238 TIHVGVVPETSQTDPTGVGDAFRAGFLTGRSAGLGLERSAQLGSLVAVLVLESTGTQEWQ 297
Query: 294 PSLSEIDQRFKEAFG 308
R A+G
Sbjct: 298 WDYEAAASRLAGAYG 312
>DICTYBASE|DDB_G0280893 [details] [associations]
symbol:rbsk "ribokinase" species:44689 "Dictyostelium
discoideum" [GO:0006014 "D-ribose metabolic process" evidence=IEA]
[GO:0004747 "ribokinase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0005975
"carbohydrate metabolic process" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0019303 "D-ribose catabolic process"
evidence=IEA] InterPro:IPR002139 PRINTS:PR00990 PROSITE:PS00583
PROSITE:PS00584 UniPathway:UPA00916 dictyBase:DDB_G0280893
Pfam:PF00294 GO:GO:0005524 GenomeReviews:CM000152_GR eggNOG:COG0524
InterPro:IPR011611 EMBL:AAFI02000039 GO:GO:0019303
RefSeq:XP_640967.2 HSSP:Q9H477 ProteinModelPortal:Q54UQ4
STRING:Q54UQ4 EnsemblProtists:DDB0304695 GeneID:8622771
KEGG:ddi:DDB_G0280893 OMA:EGIDCQG ProtClustDB:PTZ00292
GO:GO:0004747 Uniprot:Q54UQ4
Length = 318
Score = 101 (40.6 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 28/112 (25%), Positives = 56/112 (50%)
Query: 28 DQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLLNGNPLIVSILGKD--GSSYLKHLKYLG 85
D++ ++ + +K YGG A N A LL N +++ LG D G + LK+ K
Sbjct: 20 DKMPRVGETIKGTDLKVSYGGKAANQAVQASLLGSNCTLITKLGDDPSGVNTLKNFKDKN 79
Query: 86 ISNKYIQKINSMFTAQCFIVTDVNNNQITIFHPGAMQLSYDDNCINNADIKI 137
I+ +++ ++++ + I+ D N + I G+ L ++ ++NA +I
Sbjct: 80 INCEFVSVVSNVPSGCATIIVDKNGDNNIIIIGGSNDL-LNEKDVDNAKSQI 130
Score = 64 (27.6 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 23/92 (25%), Positives = 41/92 (44%)
Query: 211 EQVKVLIVTRGELGSDIFLN-NERKIKIPCVKADRIVDPTGCGDAF-RSGVLFGIINNLD 268
E + +IVT G G + N + I + ++VD +G GD+F S + + N
Sbjct: 227 ENFENIIVTLGGNGQLLVSKENNKNCHIELKEKVKVVDTSGAGDSFIGSFAHYLVTENKP 286
Query: 269 WYTTGRLSSLMGSTEISHQGGQKHCPSLSEID 300
+ +S + S ++ G Q P +EI+
Sbjct: 287 LKDSIESASKVASISVTRHGTQTSYPKSNEIN 318
>UNIPROTKB|P32143 [details] [associations]
symbol:yihV "predicted sugar kinase" species:83333
"Escherichia coli K-12" [GO:0016773 "phosphotransferase activity,
alcohol group as acceptor" evidence=IEA] [GO:0006014 "D-ribose
metabolic process" evidence=IEA] [GO:0004747 "ribokinase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016301
"kinase activity" evidence=IEA] InterPro:IPR002139
InterPro:IPR002173 PRINTS:PR00990 PROSITE:PS00583 PROSITE:PS00584
Pfam:PF00294 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR eggNOG:COG0524 InterPro:IPR011611
EMBL:L19201 GO:GO:0004747 HOGENOM:HOG000235950 GO:GO:0006014
PIR:S40827 RefSeq:NP_418319.2 RefSeq:YP_491567.1
ProteinModelPortal:P32143 SMR:P32143
EnsemblBacteria:EBESCT00000004486 EnsemblBacteria:EBESCT00000015229
GeneID:12931972 GeneID:948382 KEGG:ecj:Y75_p3303 KEGG:eco:b3883
PATRIC:32123269 EchoBASE:EB1794 EcoGene:EG11848 OMA:VAKNYTE
ProtClustDB:CLSK880807 BioCyc:EcoCyc:EG11848-MONOMER
BioCyc:ECOL316407:JW5568-MONOMER Genevestigator:P32143
Uniprot:P32143
Length = 298
Score = 88 (36.0 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 23/81 (28%), Positives = 38/81 (46%)
Query: 218 VTRGELGSDIFLNNERKIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLSS 277
VT+G G D N R+ + P K D +VD TG GD F + + + D + R +S
Sbjct: 211 VTQGSAGCDWLENGGRQHQ-PAFKVD-VVDTTGAGDVFHGALAVALATSGDLAESVRFAS 268
Query: 278 LMGSTEISHQGGQKHCPSLSE 298
+ + + + GG+ P +
Sbjct: 269 GVAALKCTRPGGRAGIPDCDQ 289
Score = 73 (30.8 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 20/74 (27%), Positives = 34/74 (45%)
Query: 47 GGCAGNIAYNLKLLNGNPLIVSILGKD--GSSYLKHLKYLGISNKYIQKINSMFTAQCFI 104
GG A A L + +G D G+S L L+ G++ +Y ++ N ++Q I
Sbjct: 38 GGPAATAAVAAARLGAQVDFIGRVGDDDTGNSLLAELESWGVNTRYTKRYNQAKSSQSAI 97
Query: 105 VTDVNNNQITIFHP 118
+ D +I I +P
Sbjct: 98 MVDTKGERIIINYP 111
>DICTYBASE|DDB_G0292440 [details] [associations]
symbol:DDB_G0292440 "carbohydrate/purine kinase
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0016773 "phosphotransferase activity, alcohol group as
acceptor" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0005975
"carbohydrate metabolic process" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR002173 PROSITE:PS00583 PROSITE:PS00584
dictyBase:DDB_G0292440 Pfam:PF00294 GO:GO:0005524 GO:GO:0005975
GO:GO:0016301 eggNOG:COG0524 GO:GO:0016773 InterPro:IPR011611
EMBL:AAFI02000190 RefSeq:XP_629616.1 ProteinModelPortal:Q54D80
EnsemblProtists:DDB0266369 GeneID:8628679 KEGG:ddi:DDB_G0292440
OMA:KERTMFG ProtClustDB:CLSZ2846586 Uniprot:Q54D80
Length = 355
Score = 101 (40.6 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 21/66 (31%), Positives = 38/66 (57%)
Query: 240 VKADRIVDPTGCGDAFRSGVLFGIIN-NLDWYTTGRLSSLMGSTEISHQGGQKHCPSLSE 298
+ +D++VD TG GD+FR+G++F +++ N + +S G+ GG P+L+
Sbjct: 281 IPSDKVVDTTGAGDSFRAGLIFSLVHKNQSLSDSLEFASACGALNCLSIGGCSSTPTLNS 340
Query: 299 IDQRFK 304
I+Q K
Sbjct: 341 INQFLK 346
Score = 57 (25.1 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 72 KDGSSYLKHLKYLGISNKYIQKINSMFTAQCFIVTDVNN 110
KDG +K ++ I N++ QK N +F FI+TD N
Sbjct: 224 KDGP--IK--EFFNIMNQWFQKDNGIFKKFLFILTDSKN 258
>TAIR|locus:2178883 [details] [associations]
symbol:Mik "AT5G58730" species:3702 "Arabidopsis
thaliana" [GO:0016301 "kinase activity" evidence=ISS] [GO:0016773
"phosphotransferase activity, alcohol group as acceptor"
evidence=IEA] [GO:0010264 "myo-inositol hexakisphosphate
biosynthetic process" evidence=IMP] InterPro:IPR002173
PROSITE:PS00584 Pfam:PF00294 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0016301 GO:GO:0016773
InterPro:IPR011611 GO:GO:0010264 HSSP:Q9TVW2 EMBL:AY058873
EMBL:AY084481 EMBL:AY103302 IPI:IPI00521299 RefSeq:NP_200681.1
UniGene:At.24607 UniGene:At.75561 ProteinModelPortal:Q93Z01
IntAct:Q93Z01 PRIDE:Q93Z01 EnsemblPlants:AT5G58730.1 GeneID:835987
KEGG:ath:AT5G58730 TAIR:At5g58730 eggNOG:NOG129060
HOGENOM:HOG000029334 InParanoid:Q93Z01 OMA:VGSYCHD PhylomeDB:Q93Z01
ProtClustDB:PLN02630 Genevestigator:Q93Z01 Uniprot:Q93Z01
Length = 353
Score = 118 (46.6 bits), Expect = 0.00015, P = 0.00015
Identities = 30/84 (35%), Positives = 46/84 (54%)
Query: 211 EQVKVL---IVTRGELGSDIFLNNERKIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNL 267
EQ+K L +VT GE G I+ + + ++ +P A + VDPTG GD+F G++ G++ L
Sbjct: 207 EQMKHLCCVVVTNGEKGCRIY-HKDDEMTVPPFLAKQ-VDPTGAGDSFLGGLIVGLVEGL 264
Query: 268 DWYTTGRLSSLMGSTEISHQGGQK 291
L +L GS + H G K
Sbjct: 265 TVPDAALLGNLFGSITVEHIGQPK 288
>TAIR|locus:2165361 [details] [associations]
symbol:AT5G51830 species:3702 "Arabidopsis thaliana"
[GO:0004747 "ribokinase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0006014 "D-ribose metabolic process"
evidence=IEA] [GO:0016301 "kinase activity" evidence=ISS]
[GO:0016773 "phosphotransferase activity, alcohol group as
acceptor" evidence=IEA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR002139 InterPro:IPR002173 PRINTS:PR00990
PROSITE:PS00583 PROSITE:PS00584 Pfam:PF00294 GO:GO:0005829
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046686 EMBL:AB010074
eggNOG:COG0524 InterPro:IPR011611 HOGENOM:HOG000235951 KO:K00847
GO:GO:0004747 GO:GO:0006014 ProtClustDB:PLN02323 HSSP:P05054
EMBL:AF370289 EMBL:AY063037 IPI:IPI00536259 RefSeq:NP_199996.1
UniGene:At.22103 ProteinModelPortal:Q9FLH8 SMR:Q9FLH8 STRING:Q9FLH8
PaxDb:Q9FLH8 PRIDE:Q9FLH8 EnsemblPlants:AT5G51830.1 GeneID:835258
KEGG:ath:AT5G51830 TAIR:At5g51830 InParanoid:Q9FLH8 OMA:NIRADLW
PhylomeDB:Q9FLH8 ArrayExpress:Q9FLH8 Genevestigator:Q9FLH8
Uniprot:Q9FLH8
Length = 343
Score = 78 (32.5 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 33/151 (21%), Positives = 55/151 (36%)
Query: 39 SPTMKKEYGGCAGNIAYNLKLLNGNPLIVSILGKD--GSSYLKHLKYLGISNKYIQKINS 96
+P KK GG N+A + L G+ + +G D G L+ + N ++ ++
Sbjct: 46 APAFKKAPGGAPANVAVGVSRLGGSSAFIGKVGDDEFGRMLADILRLNNVDNSGMRFDHN 105
Query: 97 MFTAQCFIVTDVNNNQITIF--HPGA----MQLSYDDNCINNADI----KIAIISPDNCC 146
TA F+ + + +F HP A ++ D N I A I I++I
Sbjct: 106 ARTALAFVTLRGDGEREFLFFRHPSADMLLLESELDKNLIQKAKIFHYGSISLIEEPCRS 165
Query: 147 NMXXXXXXXXXXXXXXXXDPGQSLSMFTKEE 177
DP L ++ EE
Sbjct: 166 TQLVAMKIAKAAGSLLSYDPNLRLPLWPSEE 196
Score = 77 (32.2 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 21/55 (38%), Positives = 33/55 (60%)
Query: 213 VKVLIVTRGELGSDIFLNNERKIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNL 267
+K+L+V+ G G + E K ++ VK + VD TG GDAF SG+L + ++L
Sbjct: 243 LKLLVVSEGPNGCRYY-TQEFKGRVGGVKV-KPVDTTGAGDAFVSGLLNSLASDL 295
>FB|FBgn0032424 [details] [associations]
symbol:CG17010 species:7227 "Drosophila melanogaster"
[GO:0004747 "ribokinase activity" evidence=ISS] [GO:0006014
"D-ribose metabolic process" evidence=IEA] InterPro:IPR002139
PRINTS:PR00990 Pfam:PF00294 EMBL:AE014134 InterPro:IPR011611
GO:GO:0004747 KO:K00852 GeneTree:ENSGT00390000005743 GO:GO:0006014
EMBL:BT011149 RefSeq:NP_609560.2 UniGene:Dm.33633 HSSP:P05054
SMR:Q9VK96 STRING:Q9VK96 EnsemblMetazoa:FBtr0080354 GeneID:34650
KEGG:dme:Dmel_CG17010 UCSC:CG17010-RA FlyBase:FBgn0032424
InParanoid:Q9VK96 OMA:YMVGRIG GenomeRNAi:34650 NextBio:789507
Uniprot:Q9VK96
Length = 429
Score = 80 (33.2 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 23/81 (28%), Positives = 37/81 (45%)
Query: 42 MKKEYGGCAGNIAYNLKLLNGNPLIVSILGKD--GSSYLKHLKYLGISNKYIQKINSMFT 99
M+ +GG N L + ++V+ LGKD G YL HL+ + ++Q++ + T
Sbjct: 36 METCFGGKGANQCVAAAKLGASTVLVAKLGKDESGDDYLNHLQQHEVDVTHVQQVENNPT 95
Query: 100 AQCFIVTDVNNNQITIFHPGA 120
I N +Q I GA
Sbjct: 96 GMSEIAVSENGDQYKINVAGA 116
Score = 76 (31.8 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 17/58 (29%), Positives = 31/58 (53%)
Query: 209 INEQVKVLIVTRGELGSDIFLNNERK---IKIPCVKADRIVDPTGCGDAFRSGVLFGI 263
I + K +I+T GE G+ ++++ + K +P + DP+G GDAF + + I
Sbjct: 212 IAKGAKSVIITMGEQGA-VYMSKKSKDMCTHVPASDVPHLADPSGAGDAFMGSLAYHI 268
>TAIR|locus:2013094 [details] [associations]
symbol:AT1G19600 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016301 "kinase activity"
evidence=ISS] Pfam:PF00294 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0016301 eggNOG:COG0524 InterPro:IPR011611 EMBL:AC024609
EMBL:AC025808 HSSP:Q9TVW2 EMBL:BT004821 EMBL:AK227761
IPI:IPI00525669 PIR:F86328 RefSeq:NP_173390.1 UniGene:At.26831
ProteinModelPortal:Q9LN35 SMR:Q9LN35 PRIDE:Q9LN35
EnsemblPlants:AT1G19600.1 GeneID:838547 KEGG:ath:AT1G19600
TAIR:At1g19600 HOGENOM:HOG000235949 InParanoid:Q9LN35 OMA:LEECCKV
PhylomeDB:Q9LN35 ProtClustDB:PLN02379 Genevestigator:Q9LN35
Uniprot:Q9LN35
Length = 355
Score = 89 (36.4 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 23/74 (31%), Positives = 35/74 (47%)
Query: 217 IVTRGELGSDIFLNNERKIKIPCVKADRIVDPTGCGDAFRSGVLFGIINNLDWYTTGRLS 276
+VT G G I +++ + I + D TG GD F SG L+G+I L ++
Sbjct: 258 VVTLGSKGC-IAKHDKEVVHISAIGETVATDATGAGDLFASGFLYGLIKGLSLEECCKVG 316
Query: 277 SLMGSTEISHQGGQ 290
S G + I GG+
Sbjct: 317 SCSGGSVIRALGGE 330
Score = 63 (27.2 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 22/90 (24%), Positives = 39/90 (43%)
Query: 26 LPDQLDKINVSFYSPTMKKEYGGCAGNIAYNLKLLNGNPL-IVSILGKD--GSSYLKHLK 82
L L +++ +KK GG N L + G I+ G D G ++ ++
Sbjct: 53 LEHMLKELDAHISVAPLKKMAGGSVTNTVRGLSVGFGVATGIIGAYGDDEQGQLFVSNMG 112
Query: 83 YLGISNKYIQKINSMFTAQCFIVTDVNNNQ 112
+ G+S ++K TAQC + D + N+
Sbjct: 113 FSGVSISRLRKKKGS-TAQCVCLVDDSGNR 141
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.138 0.412 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 312 271 0.00098 114 3 11 22 0.49 33
32 0.40 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 8
No. of states in DFA: 607 (65 KB)
Total size of DFA: 198 KB (2112 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.31u 0.14s 21.45t Elapsed: 00:00:02
Total cpu time: 21.31u 0.14s 21.45t Elapsed: 00:00:02
Start: Thu Aug 15 11:14:04 2013 End: Thu Aug 15 11:14:06 2013