Query psy886
Match_columns 962
No_of_seqs 577 out of 4646
Neff 8.6
Searched_HMMs 46136
Date Fri Aug 16 21:12:18 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy886.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/886hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0202|consensus 100.0 4E-150 1E-154 1260.1 54.7 772 41-962 28-897 (972)
2 KOG0204|consensus 100.0 1E-122 2E-127 1036.9 44.5 717 40-961 123-938 (1034)
3 TIGR01523 ATPase-IID_K-Na pota 100.0 1E-114 3E-119 1076.9 71.9 755 41-962 31-961 (1053)
4 COG0474 MgtA Cation transport 100.0 2E-113 5E-118 1057.2 62.5 710 40-961 48-841 (917)
5 TIGR01116 ATPase-IIA1_Ca sarco 100.0 8E-111 2E-115 1041.7 73.8 753 67-962 9-847 (917)
6 PRK10517 magnesium-transportin 100.0 6E-108 1E-112 1005.6 67.8 688 40-962 71-829 (902)
7 TIGR01106 ATPase-IIC_X-K sodiu 100.0 1E-106 2E-111 1010.9 72.7 672 41-881 41-809 (997)
8 PRK15122 magnesium-transportin 100.0 2E-106 5E-111 993.5 68.8 706 40-962 49-829 (903)
9 TIGR01524 ATPase-IIIB_Mg magne 100.0 4E-106 8E-111 991.2 68.4 685 40-962 37-794 (867)
10 TIGR01522 ATPase-IIA2_Ca golgi 100.0 1E-105 2E-110 993.8 70.8 705 40-961 28-810 (884)
11 TIGR01517 ATPase-IIB_Ca plasma 100.0 7E-105 1E-109 992.7 68.9 721 40-961 64-871 (941)
12 KOG0203|consensus 100.0 3E-104 8E-109 886.8 27.7 607 230-891 145-855 (1019)
13 TIGR01647 ATPase-IIIA_H plasma 100.0 1.1E-99 2E-104 922.8 65.5 647 41-962 6-727 (755)
14 TIGR01657 P-ATPase-V P-type AT 100.0 1.1E-93 2.3E-98 899.8 58.7 653 40-881 143-922 (1054)
15 TIGR01652 ATPase-Plipid phosph 100.0 7.6E-86 1.6E-90 831.7 54.4 707 60-881 18-898 (1057)
16 PRK14010 potassium-transportin 100.0 2.9E-85 6.3E-90 768.7 52.4 527 66-848 33-590 (673)
17 PRK01122 potassium-transportin 100.0 2E-81 4.4E-86 736.9 53.2 531 65-847 33-593 (679)
18 PLN03190 aminophospholipid tra 100.0 6.7E-80 1.5E-84 767.6 55.4 716 49-881 87-1002(1178)
19 TIGR01497 kdpB K+-transporting 100.0 1.8E-77 3.8E-82 701.7 51.9 530 67-848 34-595 (675)
20 COG2217 ZntA Cation transport 100.0 2.1E-76 4.6E-81 693.4 44.3 539 34-840 113-678 (713)
21 PRK11033 zntA zinc/cadmium/mer 100.0 3.8E-71 8.2E-76 670.6 48.2 511 51-839 169-706 (741)
22 KOG0207|consensus 100.0 6.1E-71 1.3E-75 630.0 29.3 572 36-856 275-879 (951)
23 PRK10671 copA copper exporting 100.0 8.1E-68 1.8E-72 655.0 51.1 533 41-839 223-790 (834)
24 KOG0208|consensus 100.0 2.7E-68 5.8E-73 606.9 42.0 670 40-881 164-982 (1140)
25 TIGR01511 ATPase-IB1_Cu copper 100.0 1.7E-67 3.7E-72 622.5 49.0 508 54-839 4-544 (562)
26 KOG0205|consensus 100.0 6.9E-69 1.5E-73 584.8 29.8 589 41-874 41-700 (942)
27 TIGR01494 ATPase_P-type ATPase 100.0 3.7E-67 7.9E-72 616.8 45.0 452 223-846 6-486 (499)
28 TIGR01525 ATPase-IB_hvy heavy 100.0 1E-66 2.2E-71 618.3 44.9 480 96-839 17-525 (556)
29 TIGR01512 ATPase-IB2_Cd heavy 100.0 5.1E-65 1.1E-69 599.7 46.5 460 96-840 17-505 (536)
30 KOG0206|consensus 100.0 4.2E-66 9.2E-71 620.2 35.8 717 48-881 31-925 (1151)
31 KOG0210|consensus 100.0 3.9E-66 8.5E-71 565.7 26.4 687 64-881 100-911 (1051)
32 KOG0209|consensus 100.0 4.1E-56 8.8E-61 495.9 23.3 530 42-767 169-716 (1160)
33 COG2216 KdpB High-affinity K+ 100.0 3.6E-53 7.8E-58 452.9 34.3 552 41-848 16-596 (681)
34 PF00122 E1-E2_ATPase: E1-E2 A 100.0 3.7E-33 8E-38 295.9 22.7 216 229-464 14-230 (230)
35 PF00122 E1-E2_ATPase: E1-E2 A 99.6 3.3E-16 7.2E-21 166.1 10.2 96 102-201 1-97 (230)
36 PRK14010 potassium-transportin 99.6 6.7E-15 1.4E-19 174.6 13.6 87 222-313 75-165 (673)
37 PF13246 Hydrolase_like2: Puta 99.6 2.9E-15 6.2E-20 132.6 7.9 91 541-652 1-91 (91)
38 TIGR01494 ATPase_P-type ATPase 99.5 5.7E-15 1.2E-19 174.4 8.5 96 104-205 3-100 (499)
39 TIGR01497 kdpB K+-transporting 99.5 7.7E-14 1.7E-18 165.4 15.8 88 222-314 76-167 (675)
40 PRK01122 potassium-transportin 99.5 1.1E-13 2.5E-18 164.3 15.4 88 222-313 75-165 (679)
41 TIGR01512 ATPase-IB2_Cd heavy 99.5 1.4E-13 3.1E-18 163.1 12.5 96 222-341 27-124 (536)
42 KOG0203|consensus 99.5 1.8E-14 3.8E-19 164.9 3.3 172 42-219 64-242 (1019)
43 TIGR01511 ATPase-IB1_Cu copper 99.5 2E-13 4.2E-18 162.5 12.3 99 221-342 62-162 (562)
44 PRK10671 copA copper exporting 99.5 2.3E-13 4.9E-18 169.9 12.1 99 221-343 294-394 (834)
45 TIGR01525 ATPase-IB_hvy heavy 99.4 4.3E-13 9.4E-18 160.0 12.6 79 221-304 26-107 (556)
46 COG2217 ZntA Cation transport 99.4 4.6E-13 1E-17 159.2 11.6 99 221-342 182-282 (713)
47 PRK11033 zntA zinc/cadmium/mer 99.4 3.6E-13 7.7E-18 164.8 10.7 98 221-342 214-313 (741)
48 PF00702 Hydrolase: haloacid d 99.3 4.7E-12 1E-16 132.6 12.1 53 714-766 115-167 (215)
49 TIGR01523 ATPase-IID_K-Na pota 99.3 2E-12 4.3E-17 163.0 9.8 124 62-202 59-182 (1053)
50 KOG0207|consensus 99.3 1.8E-12 3.9E-17 151.1 7.9 100 221-343 349-450 (951)
51 TIGR01522 ATPase-IIA2_Ca golgi 99.3 2.2E-12 4.8E-17 161.5 8.8 114 65-205 61-184 (884)
52 KOG0208|consensus 99.3 1.4E-11 3.1E-16 143.7 12.0 81 231-316 231-314 (1140)
53 KOG0202|consensus 99.3 1.7E-12 3.7E-17 149.3 4.2 92 106-204 90-181 (972)
54 TIGR01652 ATPase-Plipid phosph 99.2 9.2E-11 2E-15 149.9 14.0 211 229-446 69-323 (1057)
55 COG0474 MgtA Cation transport 99.1 5.8E-11 1.3E-15 148.3 7.9 94 102-205 112-207 (917)
56 KOG0205|consensus 99.1 4E-11 8.7E-16 133.7 4.2 97 101-204 104-200 (942)
57 TIGR01106 ATPase-IIC_X-K sodiu 99.1 2E-10 4.4E-15 145.3 10.4 91 100-202 110-205 (997)
58 PLN03190 aminophospholipid tra 99.0 1.3E-09 2.9E-14 138.1 13.9 150 245-397 168-346 (1178)
59 KOG4383|consensus 98.9 5.5E-07 1.2E-11 101.2 28.2 238 640-880 698-1149(1354)
60 COG2216 KdpB High-affinity K+ 98.9 2.9E-09 6.3E-14 116.6 8.7 81 230-314 85-166 (681)
61 PF00689 Cation_ATPase_C: Cati 98.7 7.2E-09 1.6E-13 105.5 4.4 95 850-961 1-112 (182)
62 KOG0209|consensus 98.7 3.4E-08 7.3E-13 113.6 7.2 78 235-317 238-320 (1160)
63 TIGR01116 ATPase-IIA1_Ca sarco 98.6 3.3E-07 7.1E-12 115.7 14.8 118 229-356 54-171 (917)
64 TIGR01647 ATPase-IIIA_H plasma 98.6 4.2E-07 9E-12 112.2 13.5 188 229-450 73-264 (755)
65 PRK10517 magnesium-transportin 98.5 7E-07 1.5E-11 111.8 14.4 117 229-353 140-260 (902)
66 TIGR01524 ATPase-IIIB_Mg magne 98.5 1.3E-06 2.7E-11 109.5 14.5 118 229-356 106-229 (867)
67 PRK15122 magnesium-transportin 98.4 2.8E-07 6.1E-12 115.5 6.6 123 229-353 129-259 (903)
68 TIGR01657 P-ATPase-V P-type AT 98.2 8.7E-06 1.9E-10 104.4 13.6 225 230-486 212-450 (1054)
69 TIGR01517 ATPase-IIB_Ca plasma 98.2 2E-06 4.2E-11 109.1 6.4 58 229-288 146-204 (941)
70 KOG0204|consensus 97.4 0.00013 2.9E-09 85.5 4.3 55 230-286 201-256 (1034)
71 TIGR00338 serB phosphoserine p 97.0 0.0017 3.7E-08 68.0 7.9 86 726-812 85-218 (219)
72 COG4087 Soluble P-type ATPase 96.8 0.0039 8.4E-08 57.1 6.7 88 715-803 19-138 (152)
73 PRK11133 serB phosphoserine ph 96.0 0.014 3E-07 64.7 7.0 87 726-813 181-315 (322)
74 TIGR01670 YrbI-phosphatas 3-de 95.8 0.015 3.3E-07 57.2 5.7 82 734-815 36-150 (154)
75 TIGR02726 phenyl_P_delta pheny 95.3 0.025 5.4E-07 56.4 5.3 83 733-815 41-156 (169)
76 PRK01158 phosphoglycolate phos 94.3 0.14 3E-06 54.0 8.0 40 727-766 21-60 (230)
77 COG0561 Cof Predicted hydrolas 94.3 0.14 3E-06 55.3 8.2 40 727-766 21-60 (264)
78 PRK09484 3-deoxy-D-manno-octul 94.2 0.064 1.4E-06 54.4 5.0 85 733-817 55-172 (183)
79 TIGR01487 SPP-like sucrose-pho 93.4 0.16 3.5E-06 53.0 6.4 41 726-766 18-58 (215)
80 PRK15126 thiamin pyrimidine py 93.4 0.23 5E-06 53.9 7.9 40 726-765 19-58 (272)
81 KOG0210|consensus 93.3 0.065 1.4E-06 62.2 3.4 62 252-316 168-231 (1051)
82 TIGR01482 SPP-subfamily Sucros 93.0 0.28 6.2E-06 51.4 7.8 40 726-765 15-54 (225)
83 TIGR02137 HSK-PSP phosphoserin 92.9 0.36 7.9E-06 49.8 8.1 89 726-816 68-198 (203)
84 PRK13222 phosphoglycolate phos 92.4 0.44 9.4E-06 49.9 8.1 42 725-766 92-133 (226)
85 KOG0206|consensus 91.4 0.15 3.2E-06 64.5 3.5 71 244-315 111-183 (1151)
86 PF08282 Hydrolase_3: haloacid 91.0 0.51 1.1E-05 50.0 6.9 41 726-766 15-55 (254)
87 cd01427 HAD_like Haloacid deha 89.7 0.64 1.4E-05 43.7 5.7 45 722-766 20-64 (139)
88 PF12710 HAD: haloacid dehalog 89.6 0.39 8.5E-06 48.8 4.4 39 729-767 92-130 (192)
89 COG0560 SerB Phosphoserine pho 89.0 0.66 1.4E-05 48.2 5.5 42 725-766 76-117 (212)
90 PRK10513 sugar phosphate phosp 88.7 0.39 8.4E-06 52.0 3.8 62 753-814 198-265 (270)
91 COG0546 Gph Predicted phosphat 88.4 1.6 3.6E-05 45.6 8.2 89 724-814 87-218 (220)
92 COG1778 Low specificity phosph 88.1 1.1 2.4E-05 43.1 5.6 34 733-766 42-75 (170)
93 PRK10530 pyridoxal phosphate ( 87.0 0.64 1.4E-05 50.3 4.1 69 746-814 193-268 (272)
94 PRK13582 thrH phosphoserine ph 86.7 2.4 5.2E-05 43.6 8.1 40 726-766 68-107 (205)
95 TIGR01488 HAD-SF-IB Haloacid D 86.6 1.2 2.7E-05 44.4 5.8 41 726-766 73-113 (177)
96 TIGR01544 HAD-SF-IE haloacid d 86.3 1.6 3.5E-05 46.9 6.6 43 725-767 120-162 (277)
97 TIGR01454 AHBA_synth_RP 3-amin 86.3 2.8 6.1E-05 43.1 8.4 41 726-766 75-115 (205)
98 TIGR01490 HAD-SF-IB-hyp1 HAD-s 84.3 1.3 2.8E-05 45.6 4.6 43 724-766 85-127 (202)
99 PLN02954 phosphoserine phospha 84.2 1.8 3.9E-05 45.3 5.7 41 726-766 84-124 (224)
100 PRK10976 putative hydrolase; P 83.9 0.82 1.8E-05 49.4 3.1 63 752-814 191-261 (266)
101 TIGR01491 HAD-SF-IB-PSPlk HAD- 83.6 2 4.3E-05 43.9 5.7 41 726-766 80-120 (201)
102 PLN02887 hydrolase family prot 82.7 1 2.2E-05 54.0 3.4 64 751-814 507-576 (580)
103 TIGR01662 HAD-SF-IIIA HAD-supe 81.2 2.8 6.1E-05 39.7 5.3 41 726-766 25-73 (132)
104 KOG1615|consensus 79.2 4 8.6E-05 40.7 5.5 41 727-767 89-129 (227)
105 PF13344 Hydrolase_6: Haloacid 79.0 1.3 2.7E-05 40.1 2.0 48 720-767 8-58 (101)
106 TIGR02471 sucr_syn_bact_C sucr 77.6 7.3 0.00016 41.1 7.7 86 729-814 125-232 (236)
107 TIGR01489 DKMTPPase-SF 2,3-dik 77.0 4.1 8.9E-05 41.0 5.4 42 725-766 71-112 (188)
108 TIGR01449 PGP_bact 2-phosphogl 76.7 4.3 9.3E-05 41.9 5.5 41 726-766 85-125 (213)
109 PRK10826 2-deoxyglucose-6-phos 76.4 4.3 9.2E-05 42.4 5.4 42 726-767 92-133 (222)
110 TIGR01428 HAD_type_II 2-haloal 75.9 5.1 0.00011 40.9 5.8 41 726-766 92-132 (198)
111 TIGR02461 osmo_MPG_phos mannos 75.4 4.8 0.0001 42.3 5.4 42 725-766 14-55 (225)
112 TIGR03333 salvage_mtnX 2-hydro 73.7 5.7 0.00012 41.3 5.5 41 725-765 69-109 (214)
113 TIGR01668 YqeG_hyp_ppase HAD s 73.6 6.5 0.00014 39.2 5.6 42 725-766 42-84 (170)
114 PF13419 HAD_2: Haloacid dehal 73.1 4 8.7E-05 40.2 4.1 87 725-816 76-170 (176)
115 TIGR01545 YfhB_g-proteo haloac 73.1 6.9 0.00015 40.6 5.9 42 726-767 94-136 (210)
116 PRK13288 pyrophosphatase PpaX; 72.7 6.2 0.00013 40.9 5.5 42 726-767 82-123 (214)
117 PRK08238 hypothetical protein; 72.5 5.7 0.00012 46.6 5.6 41 726-766 72-112 (479)
118 TIGR00099 Cof-subfamily Cof su 72.4 5.6 0.00012 42.6 5.3 41 726-766 16-56 (256)
119 TIGR01486 HAD-SF-IIB-MPGP mann 72.0 6.2 0.00014 42.2 5.5 40 727-766 17-56 (256)
120 PRK13223 phosphoglycolate phos 71.8 6.8 0.00015 42.5 5.7 42 725-766 100-141 (272)
121 PHA03398 viral phosphatase sup 71.4 6.8 0.00015 42.4 5.3 40 727-766 148-188 (303)
122 PRK00192 mannosyl-3-phosphogly 70.9 6.7 0.00015 42.5 5.4 42 725-766 20-61 (273)
123 TIGR01548 HAD-SF-IA-hyp1 haloa 70.8 7.2 0.00016 39.8 5.4 43 724-766 104-146 (197)
124 TIGR01684 viral_ppase viral ph 70.8 7.2 0.00016 42.1 5.4 41 727-767 146-187 (301)
125 TIGR01509 HAD-SF-IA-v3 haloaci 70.7 7.3 0.00016 38.9 5.4 83 726-816 85-177 (183)
126 PRK10513 sugar phosphate phosp 70.7 6.4 0.00014 42.5 5.3 41 726-766 20-60 (270)
127 PRK09552 mtnX 2-hydroxy-3-keto 70.5 7.4 0.00016 40.6 5.5 40 726-766 74-113 (219)
128 TIGR02253 CTE7 HAD superfamily 70.1 7.4 0.00016 40.4 5.4 41 726-766 94-134 (221)
129 TIGR01685 MDP-1 magnesium-depe 69.9 9.3 0.0002 38.3 5.7 50 717-766 36-86 (174)
130 PRK11009 aphA acid phosphatase 69.5 7.5 0.00016 41.0 5.2 84 726-816 114-204 (237)
131 PRK11590 hypothetical protein; 69.5 9.2 0.0002 39.6 5.9 41 726-766 95-136 (211)
132 PRK10976 putative hydrolase; P 68.8 7.7 0.00017 41.8 5.4 41 726-766 19-59 (266)
133 PHA02530 pseT polynucleotide k 68.5 6.2 0.00013 43.4 4.6 46 722-767 183-228 (300)
134 TIGR03351 PhnX-like phosphonat 68.2 8.5 0.00019 40.0 5.4 42 725-766 86-127 (220)
135 PRK10444 UMP phosphatase; Prov 68.1 5.1 0.00011 42.7 3.7 47 719-765 10-59 (248)
136 PRK03669 mannosyl-3-phosphogly 66.4 8.4 0.00018 41.7 5.0 39 727-765 25-63 (271)
137 TIGR01458 HAD-SF-IIA-hyp3 HAD- 66.1 7 0.00015 42.0 4.3 40 727-766 22-64 (257)
138 TIGR00099 Cof-subfamily Cof su 66.0 3.6 7.8E-05 44.1 2.1 61 751-811 188-254 (256)
139 PRK10530 pyridoxal phosphate ( 65.9 9.9 0.00021 41.0 5.5 41 726-766 20-60 (272)
140 PRK13225 phosphoglycolate phos 65.7 11 0.00023 40.9 5.7 42 726-767 142-183 (273)
141 PLN02645 phosphoglycolate phos 65.6 6.6 0.00014 43.5 4.1 45 723-767 41-88 (311)
142 TIGR01656 Histidinol-ppas hist 65.6 9.5 0.00021 36.9 4.8 41 726-766 27-82 (147)
143 TIGR01422 phosphonatase phosph 65.4 9.5 0.00021 40.7 5.2 42 726-767 99-140 (253)
144 PLN03243 haloacid dehalogenase 64.9 11 0.00025 40.4 5.6 42 726-767 109-150 (260)
145 TIGR01672 AphA HAD superfamily 63.5 12 0.00027 39.4 5.4 41 727-767 115-159 (237)
146 TIGR02009 PGMB-YQAB-SF beta-ph 63.3 12 0.00025 37.6 5.1 39 726-766 88-126 (185)
147 TIGR01681 HAD-SF-IIIC HAD-supe 63.3 8.9 0.00019 36.2 3.9 39 726-764 29-68 (128)
148 PRK13226 phosphoglycolate phos 63.3 12 0.00027 39.2 5.4 42 726-767 95-136 (229)
149 TIGR02463 MPGP_rel mannosyl-3- 61.8 13 0.00029 38.6 5.4 38 729-766 19-56 (221)
150 TIGR01459 HAD-SF-IIA-hyp4 HAD- 61.3 11 0.00024 39.9 4.7 49 719-767 17-67 (242)
151 TIGR01457 HAD-SF-IIA-hyp2 HAD- 60.8 14 0.00031 39.3 5.5 44 724-767 15-61 (249)
152 PF06506 PrpR_N: Propionate ca 60.8 21 0.00046 35.8 6.4 62 728-825 111-172 (176)
153 PLN02770 haloacid dehalogenase 60.6 15 0.00032 39.2 5.6 42 726-767 108-149 (248)
154 PRK11587 putative phosphatase; 60.0 12 0.00027 38.8 4.8 40 726-765 83-122 (218)
155 KOG3040|consensus 59.8 19 0.00042 36.4 5.6 51 716-766 13-66 (262)
156 PRK14988 GMP/IMP nucleotidase; 58.2 18 0.00039 37.9 5.6 42 726-767 93-134 (224)
157 PF13380 CoA_binding_2: CoA bi 55.9 14 0.0003 34.3 3.7 40 727-766 64-104 (116)
158 TIGR01990 bPGM beta-phosphoglu 55.9 17 0.00036 36.4 4.8 39 726-766 87-125 (185)
159 TIGR01486 HAD-SF-IIB-MPGP mann 55.5 19 0.00041 38.5 5.3 84 731-814 147-253 (256)
160 PRK13478 phosphonoacetaldehyde 54.0 20 0.00044 38.6 5.3 41 726-766 101-141 (267)
161 PRK06769 hypothetical protein; 53.2 20 0.00043 35.9 4.7 27 727-753 29-55 (173)
162 PRK12702 mannosyl-3-phosphogly 51.6 28 0.0006 37.8 5.6 41 726-766 18-58 (302)
163 TIGR01689 EcbF-BcbF capsule bi 49.9 18 0.00038 34.2 3.4 33 725-757 23-55 (126)
164 smart00577 CPDc catalytic doma 49.9 24 0.00052 34.2 4.5 40 726-766 45-84 (148)
165 smart00775 LNS2 LNS2 domain. T 49.0 18 0.00039 35.6 3.5 34 724-757 25-58 (157)
166 PLN02575 haloacid dehalogenase 49.0 29 0.00063 39.4 5.6 41 726-766 216-256 (381)
167 TIGR03028 EpsE polysaccharide 48.4 21 0.00047 37.8 4.3 32 247-278 201-236 (239)
168 PRK06698 bifunctional 5'-methy 47.0 29 0.00063 40.8 5.5 41 726-766 330-370 (459)
169 TIGR02252 DREG-2 REG-2-like, H 46.9 31 0.00067 35.2 5.1 84 726-816 105-198 (203)
170 PF01079 Hint: Hint module; I 45.8 1.1E+02 0.0025 31.7 8.9 40 133-175 14-55 (217)
171 PRK00192 mannosyl-3-phosphogly 45.8 29 0.00064 37.5 5.0 86 729-814 160-267 (273)
172 PLN02887 hydrolase family prot 45.7 29 0.00063 41.8 5.2 41 726-766 325-365 (580)
173 PRK09449 dUMP phosphatase; Pro 45.3 32 0.0007 35.7 5.1 40 726-766 95-134 (224)
174 COG2179 Predicted hydrolase of 44.9 43 0.00093 32.9 5.2 41 726-766 46-86 (175)
175 TIGR02247 HAD-1A3-hyp Epoxide 44.3 21 0.00047 36.7 3.5 29 726-754 94-122 (211)
176 TIGR01261 hisB_Nterm histidino 43.7 35 0.00076 33.7 4.7 41 726-766 29-84 (161)
177 TIGR01549 HAD-SF-IA-v1 haloaci 42.8 41 0.00088 32.5 5.0 38 726-763 64-101 (154)
178 PRK08942 D,D-heptose 1,7-bisph 42.5 41 0.00088 33.7 5.1 26 727-752 30-55 (181)
179 TIGR02254 YjjG/YfnB HAD superf 42.5 35 0.00077 35.2 4.8 41 726-767 97-137 (224)
180 TIGR01675 plant-AP plant acid 42.1 42 0.00091 35.2 5.1 31 725-755 119-149 (229)
181 PLN02811 hydrolase 41.0 34 0.00074 35.6 4.4 32 726-757 78-109 (220)
182 TIGR00213 GmhB_yaeD D,D-heptos 40.9 23 0.00049 35.5 2.9 26 727-752 27-52 (176)
183 PF03120 DNA_ligase_OB: NAD-de 40.7 12 0.00026 32.2 0.7 22 149-170 45-67 (82)
184 TIGR01664 DNA-3'-Pase DNA 3'-p 40.6 45 0.00097 33.1 4.9 40 727-766 43-94 (166)
185 PF15584 Imm44: Immunity prote 40.5 14 0.00031 32.1 1.1 20 156-175 13-32 (94)
186 TIGR01691 enolase-ppase 2,3-di 39.3 56 0.0012 34.1 5.6 39 725-763 94-132 (220)
187 PLN02940 riboflavin kinase 39.0 41 0.00088 38.5 4.9 41 726-766 93-134 (382)
188 COG0647 NagD Predicted sugar p 38.2 35 0.00076 36.7 3.9 45 719-763 17-61 (269)
189 TIGR01452 PGP_euk phosphoglyco 37.1 33 0.00072 37.2 3.7 44 724-767 16-62 (279)
190 TIGR00266 conserved hypothetic 36.8 1.1E+02 0.0024 32.0 7.3 45 153-198 17-65 (222)
191 PTZ00445 p36-lilke protein; Pr 36.0 57 0.0012 33.6 4.8 29 727-755 76-104 (219)
192 COG1188 Ribosome-associated he 35.8 36 0.00079 30.4 2.9 30 135-167 33-62 (100)
193 PRK05446 imidazole glycerol-ph 35.7 46 0.001 37.4 4.5 41 726-766 30-85 (354)
194 TIGR01484 HAD-SF-IIB HAD-super 35.4 63 0.0014 32.9 5.3 38 726-763 17-54 (204)
195 cd05017 SIS_PGI_PMI_1 The memb 34.6 53 0.0011 30.4 4.1 36 728-765 56-91 (119)
196 PRK15078 polysaccharide export 34.0 1.2E+02 0.0026 34.6 7.5 29 134-164 211-251 (379)
197 COG0272 Lig NAD-dependent DNA 33.2 62 0.0013 39.0 5.2 78 150-251 364-448 (667)
198 PTZ00174 phosphomannomutase; P 32.3 68 0.0015 34.1 5.0 32 726-757 22-53 (247)
199 PF12710 HAD: haloacid dehalog 32.2 23 0.0005 35.6 1.3 14 471-484 1-14 (192)
200 TIGR02250 FCP1_euk FCP1-like p 32.1 74 0.0016 31.2 4.9 40 726-766 58-97 (156)
201 PLN02779 haloacid dehalogenase 31.6 61 0.0013 35.4 4.6 38 726-763 144-181 (286)
202 TIGR02329 propionate_PrpR prop 31.2 1.1E+02 0.0024 36.6 6.9 35 728-766 131-165 (526)
203 TIGR01485 SPP_plant-cyano sucr 31.2 49 0.0011 35.2 3.7 44 725-768 20-63 (249)
204 PRK14502 bifunctional mannosyl 31.0 66 0.0014 39.2 5.0 39 728-766 435-473 (694)
205 TIGR02251 HIF-SF_euk Dullard-l 30.1 87 0.0019 30.9 5.0 40 726-766 42-81 (162)
206 KOG4383|consensus 30.0 26 0.00057 41.3 1.4 37 252-290 160-196 (1354)
207 COG2013 Uncharacterized conser 29.2 1.5E+02 0.0032 31.2 6.6 49 153-202 22-75 (227)
208 PRK03818 putative transporter; 28.6 1.2E+02 0.0025 36.6 6.6 14 150-163 248-261 (552)
209 PF09419 PGP_phosphatase: Mito 28.5 92 0.002 31.0 4.8 42 725-766 58-108 (168)
210 PRK10187 trehalose-6-phosphate 28.0 62 0.0013 34.9 3.8 39 726-764 36-75 (266)
211 TIGR01533 lipo_e_P4 5'-nucleot 27.7 1.1E+02 0.0023 33.0 5.5 44 724-767 116-162 (266)
212 PF01455 HupF_HypC: HupF/HypC 27.7 1.2E+02 0.0025 25.3 4.5 32 133-166 16-50 (68)
213 PRK09456 ?-D-glucose-1-phospha 27.7 72 0.0016 32.5 4.1 32 726-757 84-115 (199)
214 cd05014 SIS_Kpsf KpsF-like pro 27.3 59 0.0013 30.2 3.2 27 728-754 60-86 (128)
215 COG0637 Predicted phosphatase/ 26.9 96 0.0021 32.3 4.9 43 725-767 85-127 (221)
216 TIGR01686 FkbH FkbH-like domai 26.7 79 0.0017 35.1 4.5 41 726-766 31-75 (320)
217 TIGR03802 Asp_Ala_antiprt aspa 25.2 1.5E+02 0.0033 35.8 6.8 26 250-276 337-362 (562)
218 PRK05933 type III secretion sy 24.1 2.3E+02 0.0049 31.0 6.9 27 261-287 312-338 (372)
219 cd00860 ThrRS_anticodon ThrRS 23.3 1.6E+02 0.0035 25.2 5.0 46 721-766 7-53 (91)
220 PF08645 PNK3P: Polynucleotide 22.8 73 0.0016 31.3 2.9 23 728-750 31-53 (159)
221 COG0241 HisB Histidinol phosph 22.7 82 0.0018 31.7 3.2 24 727-750 32-55 (181)
222 COG1663 LpxK Tetraacyldisaccha 22.6 71 0.0015 35.3 3.0 78 729-807 64-152 (336)
223 PRK05585 yajC preprotein trans 22.3 3.7E+02 0.0081 24.5 7.1 28 116-143 37-64 (106)
224 COG1188 Ribosome-associated he 21.6 85 0.0018 28.1 2.7 33 247-282 31-63 (100)
225 PF12689 Acid_PPase: Acid Phos 21.5 1.5E+02 0.0033 29.5 4.9 40 727-766 46-86 (169)
226 smart00831 Cation_ATPase_N Cat 21.2 2.2E+02 0.0048 22.7 5.1 22 41-62 15-36 (64)
227 PF05240 APOBEC_C: APOBEC-like 20.8 1E+02 0.0022 24.4 2.7 23 729-751 2-24 (55)
228 PRK08433 flagellar motor switc 20.2 51 0.0011 30.2 1.1 11 153-163 52-62 (111)
229 cd05008 SIS_GlmS_GlmD_1 SIS (S 20.1 89 0.0019 28.9 2.8 26 728-753 59-84 (126)
230 TIGR01460 HAD-SF-IIA Haloacid 20.1 1.1E+02 0.0024 32.2 3.8 42 724-765 12-57 (236)
No 1
>KOG0202|consensus
Probab=100.00 E-value=4.5e-150 Score=1260.08 Aligned_cols=772 Identities=56% Similarity=0.820 Sum_probs=663.1
Q ss_pred HHHhhhhhhccCccccCCC---ChhHHHHHHHH----HHHHHHHHHHHHhhhccccccccccchhHHHHHHHHHHHHHHH
Q psy886 41 RLRLRQIDFIPARVTSLSP---SENVHIASTNF----AVLFCLCPQVLALFEEHEDFNSTLTSFVEPFVILLILIANAIV 113 (962)
Q Consensus 41 ~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 113 (962)
.+..++..||.|.+..... |...++++.+. +++++++++++. .|.+++.|.++++++..+
T Consensus 28 ev~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~-------------~~~e~~vI~liiv~nvtV 94 (972)
T KOG0202|consen 28 EVTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLA-------------DFDEPFVITLIIVINVTV 94 (972)
T ss_pred HHHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHH-------------hcccceeeeeeeeeeeee
Confidence 5777888999999864443 45555554444 344444444433 356778888888888888
Q ss_pred HHHHHHHHHHHHHHHhccCCCeEEEEECCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeecccccCCC
Q psy886 114 GVWQERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGES 193 (962)
Q Consensus 114 ~~~~~~~~~~~l~~l~~~~~~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lTGEs 193 (962)
++|||+|+++++++|+++.|+.++|+|+|+
T Consensus 95 G~~QEy~aEkalEaLk~l~p~~~~V~R~gk-------------------------------------------------- 124 (972)
T KOG0202|consen 95 GFVQEYNAEKALEALKELVPPMAHVLRSGK-------------------------------------------------- 124 (972)
T ss_pred eeeeehhhHHHHHHHHhcCCccceEEecCc--------------------------------------------------
Confidence 888888888888888877777777777775
Q ss_pred cceeecCCCCCCcccccCCCccccccCccccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCE
Q psy886 194 VSVIKHTDAVPDPRAEKNGPQMCENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDI 273 (962)
Q Consensus 194 ~Pv~k~~g~~~~~~~~~~~~~~~~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDI 273 (962)
.+.+++++||||||
T Consensus 125 ------------------------------------------------------------------~~~i~A~eLVPGDi 138 (972)
T KOG0202|consen 125 ------------------------------------------------------------------LQHILARELVPGDI 138 (972)
T ss_pred ------------------------------------------------------------------ccceehhccCCCCE
Confidence 35667777777777
Q ss_pred EEeCCCCeecceEEEEeecCCeEEEEecCCCCCCcceeccCCCCC-CCccCCCCCcceEecCceeeeceEEEEEEEeccc
Q psy886 274 VEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVP-DPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLN 352 (962)
Q Consensus 274 V~l~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~pv~K~~~~~~-~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~ 352 (962)
|.++-||+||||.||++ ..++.+|||+|||||.|+.|.....+ ++.....+++|++|+||.|..|+++|+|+.||.+
T Consensus 139 V~l~vGDkVPADlRl~e--~~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~n 216 (972)
T KOG0202|consen 139 VELKVGDKIPADLRLIE--AKSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLN 216 (972)
T ss_pred EEEecCCccccceeEEe--eeeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEecccc
Confidence 77777777777777776 34599999999999999999998888 7778889999999999999999999999999999
Q ss_pred hhhHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHhhcCC
Q psy886 353 TAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVAAIPE 432 (962)
Q Consensus 353 T~~gki~~~~~~~~~~~tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~ 432 (962)
|++|||.+++++.+..+||||++++.+++.+..++.++|+.+|++.++++..+.+++.|++...++|.++++|+|++|||
T Consensus 217 TeiG~I~~~m~~~e~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk~~~~~f~IaVsLAVAAIPE 296 (972)
T KOG0202|consen 217 TEIGKIFKMMQATESPKTPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFKGALYYFKIAVSLAVAAIPE 296 (972)
T ss_pred chHHHHHHHHhccCCCCCcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccchhchhhhhhHHHHHHHHhccC
Confidence 99999999999999999999999999999999999999999999988889889999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHhhhcCccCCchhhhhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcceEEEeCCcc
Q psy886 433 GLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTY 512 (962)
Q Consensus 433 ~Lp~~v~i~l~~~~~~m~k~~ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (962)
|||+++|+++++|.+||+|++++||+++++|+||++++||+|||||||+|+|++.++|+.+..+... .++.+++.+|
T Consensus 297 GLPaVvT~tLALG~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~---~~f~~tg~ty 373 (972)
T KOG0202|consen 297 GLPAVVTTTLALGTRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATV---DEFNPTGTTY 373 (972)
T ss_pred CCcchhhhhHHHhHHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccc---cccccCCcee
Confidence 9999999999999999999999999999999999999999999999999999999999988765433 6788899999
Q ss_pred ccCcceecCCCccC--CCChHHHHHHHHHHhhccCCccccccccCceEEecChhHHHHHHHHHHcCCCCcccCCCchhhH
Q psy886 513 EPIGDVFLNGSKIK--GADYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQ 590 (962)
Q Consensus 513 ~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~~~~~~ 590 (962)
+|.+....+..... ....+.+.+++.++++||++.++.+.. +.|+..|+|||.||..+++|.|+........+..+
T Consensus 374 ~~~g~v~~~~~~~~~~~~~~~~l~~l~~i~~lCNda~v~~~~~-~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~- 451 (972)
T KOG0202|consen 374 SPEGEVFKDGLYEKDKAGDNDLLQELAEICALCNDATVEYNDA-DCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEE- 451 (972)
T ss_pred CCCCceEecCccccccccccHHHHHHHHHHHhhhhhhhhcCch-hhHHhcCCchHHHHHHHHHHcCCCcchhhcccccc-
Confidence 99998877664333 455678999999999999999988776 78888999999999999999998765533444444
Q ss_pred HHhhhhHHhhhceeeEeecCCCCCceEEEEEecCCCCCCCCCCCEEEEeCChHHHHhcccccccCC--eeeeCCHHHHHH
Q psy886 591 AIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGS--QKFPLTATLKNR 668 (962)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~~--~~~~l~~~~~~~ 668 (962)
...++....+.|++++++||||+||+|||++.+..+. .++.+|+|||+|.|+++|++++.++ ...|+++..|+.
T Consensus 452 ~~~c~~~~~~~~~~~~elpFssdrK~Msv~c~~~~~~----~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~ 527 (972)
T KOG0202|consen 452 ASACNRVYSRLFKKIAELPFSSDRKSMSVKCSPAHGQ----SGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRET 527 (972)
T ss_pred cccchhHHHHhhhheeEeecccccceEEEEEecCCCC----ccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHH
Confidence 4455556677788899999999999999999865432 3679999999999999998877643 569999999999
Q ss_pred HHHHHHHHhcccchhheeeEEeeeCCC-CccccccccccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEE
Q psy886 669 ILDLTRQYGTGRDTLRCLGLATADNPL-KPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIV 747 (962)
Q Consensus 669 i~~~~~~~~~~~~glRvl~~A~~~~~~-~~~~~~~~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~M 747 (962)
+++...+|+ ++||||||+|+++.+. .+++....+...+..+|.||+|+|++||.||||+||+++|+.|++|||||+|
T Consensus 528 il~~~~~~g--~~gLRvLalA~~~~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~m 605 (972)
T KOG0202|consen 528 ILANVYEMG--SEGLRVLALASKDSPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIM 605 (972)
T ss_pred HHHHHHHHh--hccceEEEEEccCCcccChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEE
Confidence 999999996 9999999999998873 4455556667778889999999999999999999999999999999999999
Q ss_pred EcCCCHHHHHHHHHHcCCCCCCcc-----ccCCCC---------------------------------------------
Q psy886 748 ITGDNKATAEAICRRIGVFTEEED-----TTGKSY--------------------------------------------- 777 (962)
Q Consensus 748 iTGD~~~TA~~IA~~~GI~~~~~~-----~~g~~l--------------------------------------------- 777 (962)
|||||++||.+|||++||+..++. .+|+++
T Consensus 606 ITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGD 685 (972)
T KOG0202|consen 606 ITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGD 685 (972)
T ss_pred EcCCCHHHHHHHHHHhCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCC
Confidence 999999999999999999876542 344433
Q ss_pred --------CcCcEEEecc-ChhHHHHhhcccccccCChhHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhC
Q psy886 778 --------SKAEIGIAMG-SGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAALG 848 (962)
Q Consensus 778 --------~~AdVGIAmg-~gtdvAkeaADivL~dd~f~~iv~ai~~gR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~ 848 (962)
++|||||||| +|||||||||||||.||||++|+.||+|||.+|+|||+|++|+|++|+++++++++++.||
T Consensus 686 GVNDApALK~AdIGIAMG~~GTdVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~ 765 (972)
T KOG0202|consen 686 GVNDAPALKKADIGIAMGISGTDVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFG 765 (972)
T ss_pred CccchhhhhhcccceeecCCccHhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhC
Confidence 5999999999 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccchhHH-H----hhCcccccccccCCCCcCccchh------------HHHHHHHHhhhH-----Hh----hhcCCCc
Q psy886 849 LPEALIKKI-S----TTNRGKKKKLSYNFLDISLLGPA------------IHYQVDLTGGPD-----QV----YLSGLPD 902 (962)
Q Consensus 849 ~~~pl~~~q-L----~~d~~~a~al~~e~~~~~~m~~p------------~~~~~~~~~~~~-----~~----~~~~~~~ 902 (962)
+|.||+|+| | +||++||.+||+|||++|+|+|| ++.|++.+|... .. |...++.
T Consensus 766 ~p~pL~pvQiLWiNlvtDG~PA~aLG~ep~D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~~~~ 845 (972)
T KOG0202|consen 766 IPEPLIPVQILWINLVTDGPPATALGFEPVDPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGADGK 845 (972)
T ss_pred CCCcccchhhheeeeeccCCchhhcCCCCCChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcCCCC
Confidence 999999999 4 99999999999999999999998 488888888621 11 1111222
Q ss_pred EEEeccchhhhhccccccCCCCccCCCccccccCccchhhHHHHHHHHHHHHHhhccCCC
Q psy886 903 SIYYLPTTVFATHHMSCLGGGDEFKGLDCHIFHDPHPMTMALSVLVTIEMLNAMNRYGRH 962 (962)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~ 962 (962)
.+| .++.|+..|-. .|.+.+|..|....+.||+|++||+++|||+|||||++
T Consensus 846 vt~-----~~~~~~~~c~~---~~~~~~c~~F~~~~~~tMa~tv~V~~emfNaL~~~se~ 897 (972)
T KOG0202|consen 846 VTY-----RQLAHYNSCCR---DFYGSRCAVFEDMCPLTMALTVLVFIEMFNALNCLSEN 897 (972)
T ss_pred cCh-----hhhcchhhhcc---cccccchhhhcccccceEEEeehhHHHHHHHhhcccCC
Confidence 233 37888888864 67788899999999999999999999999999999985
No 2
>KOG0204|consensus
Probab=100.00 E-value=1.1e-122 Score=1036.86 Aligned_cols=717 Identities=29% Similarity=0.384 Sum_probs=563.0
Q ss_pred HHHHhhhhhhccCccccCCCChhHHHH-------HHHHHHHHHHHHHHHHhhhccccccccccchhHHHHHHHHHHHHHH
Q psy886 40 CRLRLRQIDFIPARVTSLSPSENVHIA-------STNFAVLFCLCPQVLALFEEHEDFNSTLTSFVEPFVILLILIANAI 112 (962)
Q Consensus 40 ~~~~~~~~~~g~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 112 (962)
..+..+...||.|.++.+.+..+++.. ...++.+++++++.+.+|..+. ...|+++..|++.+++..+
T Consensus 123 ~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~-----~~GW~eG~aI~~sV~~VV~ 197 (1034)
T KOG0204|consen 123 DELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTLIILMVAAVVSLGLGIYTPGI-----EDGWIEGVAILLSVILVVL 197 (1034)
T ss_pred HHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchHHHHHHHHHHHHhhhhccCCC-----CcccccchhheeeEEEEEE
Confidence 457778889999999998887777665 3455667777777777665432 2367888887776666667
Q ss_pred HHHHHHHHHHHHHHHHhccC-CCeEEEEECCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeecccccC
Q psy886 113 VGVWQERNAESAIEALKEYE-PEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTG 191 (962)
Q Consensus 113 ~~~~~~~~~~~~l~~l~~~~-~~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lTG 191 (962)
+....+++.+++.++|.+.. .....|+|||+ .++|+..||+||||+.|+.||.+||||++++
T Consensus 198 VtA~nDy~qe~QF~~L~~~k~~~k~~ViR~G~--r~~isI~diVVGDIv~lk~GDqvPADGvli~--------------- 260 (1034)
T KOG0204|consen 198 VTAVNDYRQELQFRKLQKEKRNIKFQVIRGGR--RQQISIYDLVVGDIVQLKIGDQVPADGVLIQ--------------- 260 (1034)
T ss_pred EeecchhHHhhhhhhhhhhhhceEEEEEECCE--EEEEEEeeeeeccEEEeecCCccccceEEEe---------------
Confidence 77777788888888887644 44788888887 4666666666666666666666666666663
Q ss_pred CCcceeecCCCCCCcccccCCCccccccCccccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCC
Q psy886 192 ESVSVIKHTDAVPDPRAEKNGPQMCENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPG 271 (962)
Q Consensus 192 Es~Pv~k~~g~~~~~~~~~~~~~~~~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~G 271 (962)
T Consensus 261 -------------------------------------------------------------------------------- 260 (1034)
T KOG0204|consen 261 -------------------------------------------------------------------------------- 260 (1034)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CEEEeCCCCeecceEEEEeecCCeEEEEecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEecc
Q psy886 272 DIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGL 351 (962)
Q Consensus 272 DIV~l~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~ 351 (962)
+++|.+|||+|||||+++.|... .++++++||++.+|+++++|+++|+
T Consensus 261 ---------------------gn~L~iDESSlTGESd~v~k~~~-----------~dPfLlSGTkv~eGsgkMlVTaVGm 308 (1034)
T KOG0204|consen 261 ---------------------GNSLKIDESSLTGESDHVQKSLD-----------KDPFLLSGTKVMEGSGKMLVTAVGM 308 (1034)
T ss_pred ---------------------ccceeEecccccCCCcceeccCC-----------CCCeEeecceeecCcceEEEEEeee
Confidence 34667788888888888777653 3579999999999999999999999
Q ss_pred chhhHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccC---CCCC---Ccc----hHHHHHHHHH
Q psy886 352 NTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFND---PAHG---GSW----IKGAVYYFKI 421 (962)
Q Consensus 352 ~T~~gki~~~~~~~~~~~tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~~~~~---~~~~---~~~----~~~~~~~~~~ 421 (962)
+|+.|+++..+.....++||||-++++++..+..+.+.++++++++.+..|.. ...+ ..| ...++.+|..
T Consensus 309 nt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i 388 (1034)
T KOG0204|consen 309 NTQWGIIMTLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFII 388 (1034)
T ss_pred cchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhh
Confidence 99999999999998889999999999999999999888887777665432211 0111 122 2345677888
Q ss_pred HHHHHHhhcCCchHHHHHHHHHHHHHHHhhhcCccCCchhhhhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCC
Q psy886 422 AVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSS 501 (962)
Q Consensus 422 ~i~l~v~~iP~~Lp~~v~i~l~~~~~~m~k~~ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~ 501 (962)
+++++|+|+|||||+++|+++++++++|.++|++||+++||||+|+.++||+|||||||+|+|+|.+.|+++..+..+..
T Consensus 389 ~VTilVVAVPEGLPLAVTLsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~ 468 (1034)
T KOG0204|consen 389 AVTILVVAVPEGLPLAVTLSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSP 468 (1034)
T ss_pred eeEEEEEECCCCccHHHHHHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998765432110
Q ss_pred cceEEEeCCccccCcceecCCCccCCCChHHHHHHHH-HHhhccCCcccccccc-CceEEecChhHHHHHHHHHHcCCCC
Q psy886 502 FLEFEITGSTYEPIGDVFLNGSKIKGADYETLHELGT-ICIMCNDSAIDFNEFK-QAFEKVGEATETALIVLAEKLNPFN 579 (962)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~lcn~~~~~~~~~~-~~~~~~g~p~e~Al~~~a~~~g~~~ 579 (962)
.. ..-.+.+.+++. ..+...+..+..++.+ ...++.|+|||.||+.++.++|...
T Consensus 469 -------------~~----------~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~ 525 (1034)
T KOG0204|consen 469 -------------KS----------SNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDF 525 (1034)
T ss_pred -------------cc----------ccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcch
Confidence 00 001133344333 2333333333333322 3677899999999999999988733
Q ss_pred cccCCCchhhHHHhhhhHHhhhceeeEeecCCCCCceEEEEEecCCCCCCCCCCCEEEEeCChHHHHhccccccc-CCee
Q psy886 580 VSKSGLGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARI-GSQK 658 (962)
Q Consensus 580 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~-~~~~ 658 (962)
.. .+.+.+..+.+||+|+||+|+++++.+++ +.++|+|||+|.||.+|+++.. +|+.
T Consensus 526 ~~----------------~R~e~~v~kv~~FNS~kK~~gvvi~~~~~------~~y~~~KGAsEiVL~~C~~~~~~~g~~ 583 (1034)
T KOG0204|consen 526 QD----------------VRPEEKVVKVYPFNSVKKRMGVVIKLPDG------GHYVHWKGASEIVLKSCEYYIDSNGEL 583 (1034)
T ss_pred Hh----------------hcchhheeEEeccCcccceeeEEEEcCCC------CeEEEEcChHHHHHHhhhheECCCCCE
Confidence 22 44566788899999999999999986542 3149999999999999999876 7888
Q ss_pred eeCCHHHHHHHHHHHHHHhcccchhheeeEEeeeCCCCccc-cccccccccccccCCeEEEEEecccCCCCccHHHHHHH
Q psy886 659 FPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPED-MNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIAR 737 (962)
Q Consensus 659 ~~l~~~~~~~i~~~~~~~~~~~~glRvl~~A~~~~~~~~~~-~~~~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~ 737 (962)
.+++++.+..+...++.|+ ++||||+|+|||+......+ .+.. .....+.+++++|++|++||+|||||+||+.
T Consensus 584 ~~~~e~~~~~~~~~Ie~mA--~~~LRti~lAy~df~~~~~~~~~~~---~~~~~~~~lt~laivGIkDPvRPgV~~AV~~ 658 (1034)
T KOG0204|consen 584 VPFNEDDRKSFKDVIEPMA--SEGLRTICLAYRDFVAGPDEEPSWD---NEELPEGGLTLLAIVGIKDPVRPGVPEAVQL 658 (1034)
T ss_pred eeCCHHHHHHHHHHHHHHH--HhhhheeeEEeeccccCCCCCCCcc---ccccCCCCeEEEEEeeccCCCCCCcHHHHHH
Confidence 9999999999999999996 99999999999996554211 1111 1234578999999999999999999999999
Q ss_pred HHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCc---cccCCCC-------------------------------------
Q psy886 738 CRAAGIRVIVITGDNKATAEAICRRIGVFTEEE---DTTGKSY------------------------------------- 777 (962)
Q Consensus 738 l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~~~---~~~g~~l------------------------------------- 777 (962)
|++|||+|.|+||||..||++||.+|||+.+++ .++|+++
T Consensus 659 Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~g 738 (1034)
T KOG0204|consen 659 CQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFRELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQG 738 (1034)
T ss_pred HHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhhhhcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhcC
Confidence 999999999999999999999999999987654 3455544
Q ss_pred ----------------CcCcEEEecc-ChhHHHHhhcccccccCChhHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHH
Q psy886 778 ----------------SKAEIGIAMG-SGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVS 840 (962)
Q Consensus 778 ----------------~~AdVGIAmg-~gtdvAkeaADivL~dd~f~~iv~ai~~gR~i~~ni~k~i~~~l~~ni~~~~~ 840 (962)
++||||.||| +|||||||||||||+||||++||++++|||++|+||+||++|+|+.|++++++
T Consensus 739 ~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv 818 (1034)
T KOG0204|consen 739 EVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIV 818 (1034)
T ss_pred cEEEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehh
Confidence 5999999999 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCccchhHH-H----hhCcccccccccCCCCcCccchh-----------HHHHHHHHhhhHH---hhhcCCC
Q psy886 841 IFLTAALGLPEALIKKI-S----TTNRGKKKKLSYNFLDISLLGPA-----------IHYQVDLTGGPDQ---VYLSGLP 901 (962)
Q Consensus 841 ~~~~~~~~~~~pl~~~q-L----~~d~~~a~al~~e~~~~~~m~~p-----------~~~~~~~~~~~~~---~~~~~~~ 901 (962)
.++++..--..||+++| | |||.|.|+|||+|||.+++|+|| .|||.++....-+ ++.
T Consensus 819 ~fv~A~~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~~Lm~RkP~GR~~~LIt~tMwknil~qa~YQl~vl~i---- 894 (1034)
T KOG0204|consen 819 NFVSACATGDSPLTAVQLLWVNLIMDTLGALALATEPPTDELMKRKPVGRTKPLITRTMWKNILGQAVYQLIVLFI---- 894 (1034)
T ss_pred hhhhhhhcCCccHHHHHHHHHHHHHHHHHHHHhccCCCChHHhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHH----
Confidence 99999888889999999 4 99999999999999999999988 3888887655211 111
Q ss_pred cEEEeccchhhhhccccccCCCCccCCCccccc-cCccchhhHHHHHHHHHHHHHhhccCC
Q psy886 902 DSIYYLPTTVFATHHMSCLGGGDEFKGLDCHIF-HDPHPMTMALSVLVTIEMLNAMNRYGR 961 (962)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~t~~f~~~~~~~~~~~~~~r~~ 961 (962)
+.|... .+|+ + +.+.. ......|++|++||+||+||-||+|+-
T Consensus 895 -L~F~G~---~if~----~---------~~~~~~~~~~~nTiIFNtFV~~qvFNEinaRki 938 (1034)
T KOG0204|consen 895 -LNFAGK---SIFG----L---------NGPLHSPPSVHNTIIFNTFVFCQVFNEINARKI 938 (1034)
T ss_pred -HHhcch---hhhc----c---------CCCCCCchhhheeeehhHHHHHHHHHHHhhcch
Confidence 001100 1110 0 00010 223456999999999999999999974
No 3
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=1.4e-114 Score=1076.91 Aligned_cols=755 Identities=27% Similarity=0.403 Sum_probs=560.0
Q ss_pred HHHhhhhhhccCccccCCCChhHH---HHHHHHHHHHHHHHHHHHhhhccccccccccchhHHHHHHHHHHHHHHHHHHH
Q psy886 41 RLRLRQIDFIPARVTSLSPSENVH---IASTNFAVLFCLCPQVLALFEEHEDFNSTLTSFVEPFVILLILIANAIVGVWQ 117 (962)
Q Consensus 41 ~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 117 (962)
.+-.++..||+|.+..+++...++ ..+..+..++.+++.+++++ ...|.++++++++++++..++.+|
T Consensus 31 ea~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~---------~~~~~~~~iIl~vv~in~~i~~~Q 101 (1053)
T TIGR01523 31 EAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFA---------MHDWIEGGVISAIIALNILIGFIQ 101 (1053)
T ss_pred HHHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHH---------HhhHHHHHHHHhHHHHHHHHHHHH
Confidence 477888899999998776543332 22333333333333333322 125888999999999999999999
Q ss_pred HHHHHHHHHHHhccCCCeEEEEECCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeecccccCCCccee
Q psy886 118 ERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVI 197 (962)
Q Consensus 118 ~~~~~~~l~~l~~~~~~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lTGEs~Pv~ 197 (962)
|+|+++++++|+++.+.+++|+|||+ +
T Consensus 102 E~~aekal~aL~~l~~~~~~ViRdg~--~--------------------------------------------------- 128 (1053)
T TIGR01523 102 EYKAEKTMDSLKNLASPMAHVIRNGK--S--------------------------------------------------- 128 (1053)
T ss_pred HHHHHHHHHHHhccCCCceEEEeCCe--e---------------------------------------------------
Confidence 99999999999999888889988887 3
Q ss_pred ecCCCCCCcccccCCCccccccCccccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEEEeC
Q psy886 198 KHTDAVPDPRAEKNGPQMCENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVS 277 (962)
Q Consensus 198 k~~g~~~~~~~~~~~~~~~~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~ 277 (962)
++|+++||||||||.|+
T Consensus 129 ---------------------------------------------------------------~~I~a~eLVpGDIv~L~ 145 (1053)
T TIGR01523 129 ---------------------------------------------------------------DAIDSHDLVPGDICLLK 145 (1053)
T ss_pred ---------------------------------------------------------------eecCHhhCCCCCEEEEC
Confidence 45555566666666666
Q ss_pred CCCeecceEEEEeecCCeEEEEecCCCCCCcceeccCCCCC--CCccCCCCCcceEecCceeeeceEEEEEEEeccchhh
Q psy886 278 VGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVP--DPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLNTAI 355 (962)
Q Consensus 278 ~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~pv~K~~~~~~--~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~T~~ 355 (962)
+||+||||+||++ +.+|.||||+|||||.||.|.+.... +......++.|++|+||.|++|+++++|++||++|++
T Consensus 146 ~Gd~VPAD~rLi~--~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~ 223 (1053)
T TIGR01523 146 TGDTIPADLRLIE--TKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEI 223 (1053)
T ss_pred CCCEeeccEEEEE--eCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHH
Confidence 6666666666665 45789999999999999999876432 2234456889999999999999999999999999999
Q ss_pred HHHHhhcccccc-----------------------------------CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy886 356 GKIRTEMSETEE-----------------------------------IKTPLQQKLDEFGEQLSKVISIICVAVWAINIG 400 (962)
Q Consensus 356 gki~~~~~~~~~-----------------------------------~~tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~ 400 (962)
|||++++.+.+. .+||||+++++++++++.++++++++++++..
T Consensus 224 GkIa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~- 302 (1053)
T TIGR01523 224 GAIAAGLQGDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHK- 302 (1053)
T ss_pred HHHHHHHhhhhhccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 999998854321 24999999999999998888888877776532
Q ss_pred cccCCCCCCcchHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhhhcCccCCchhhhhcCCeeEEEecCCCccc
Q psy886 401 HFNDPAHGGSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLT 480 (962)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~Lp~~v~i~l~~~~~~m~k~~ilvr~~~~~E~LG~v~~I~~DKTGTLT 480 (962)
+ .+ ....+..+++++++++|||||++++++++++++||+|+|++||+++++|+||++++||+|||||||
T Consensus 303 -~-------~~---~~~~~~~av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT 371 (1053)
T TIGR01523 303 -F-------DV---DKEVAIYAICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTIT 371 (1053)
T ss_pred -h-------hh---hHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccc
Confidence 1 01 123566789999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceEEEEEEEecc-ccCCCCCcceEEEe--CCccccC-cce--------------------ecCC-----CccC-C--C
Q psy886 481 TNQMSVSRMFIFDK-IEGSDSSFLEFEIT--GSTYEPI-GDV--------------------FLNG-----SKIK-G--A 528 (962)
Q Consensus 481 ~n~m~v~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~-~~~--------------------~~~~-----~~~~-~--~ 528 (962)
+|+|+|+++|..+. .+ .+. +.+|.|. +.. .... ...+ . .
T Consensus 372 ~N~M~V~~i~~~~~~~~---------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (1053)
T TIGR01523 372 QGKMIARQIWIPRFGTI---------SIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDI 442 (1053)
T ss_pred cceEEEEEEEEcCCceE---------EecCCCCCCCCccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999987541 11 111 0111111 000 0000 0000 0 0
Q ss_pred ChHHHHHHHHHHhhccCCccccccccCceEEecChhHHHHHHHHHHcCCCCccc---CCCchh-hH---H--HhhhhHHh
Q psy886 529 DYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSK---SGLGRR-EQ---A--IAVRQDVE 599 (962)
Q Consensus 529 ~~~~l~~~~~~~~lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~~g~~~~~~---~~~~~~-~~---~--~~~~~~~~ 599 (962)
..+.+.+++.++++||++.+..++..+.+...|||+|.||+.++.+.|+..... ...... +. . ........
T Consensus 443 ~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (1053)
T TIGR01523 443 DMDLFIKLLETAALANIATVFKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGS 522 (1053)
T ss_pred ccHHHHHHHHHHHhccCCeeeccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccc
Confidence 123466788889999998765432223456789999999999999888632100 000000 00 0 00000113
Q ss_pred hhceeeEeecCCCCCceEEEEEecCCCCCCCCCCCEEEEeCChHHHHhcccccccC-C-eeeeCCHHHHHHHHHHHHHHh
Q psy886 600 TKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIG-S-QKFPLTATLKNRILDLTRQYG 677 (962)
Q Consensus 600 ~~~~~~~~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~-~-~~~~l~~~~~~~i~~~~~~~~ 677 (962)
..|+++.++||||+||||+++++..++ +.+++|+|||||.|+++|+++..+ + +..+++++.++++.+..++|+
T Consensus 523 ~~~~~~~~~pFds~rK~msvv~~~~~~-----~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a 597 (1053)
T TIGR01523 523 AQFEFIAEFPFDSEIKRMASIYEDNHG-----ETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLA 597 (1053)
T ss_pred cccceEEEeccCCCCCeEEEEEEeCCC-----CEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHH
Confidence 468899999999999999999975421 146899999999999999976542 2 467899999999999999996
Q ss_pred cccchhheeeEEeeeCCCCccccc-cc-cccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHH
Q psy886 678 TGRDTLRCLGLATADNPLKPEDMN-LA-DSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKAT 755 (962)
Q Consensus 678 ~~~~glRvl~~A~~~~~~~~~~~~-~~-~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~T 755 (962)
++|+|||++|||+++.++.... .. .....+.+|+||+|+|+++++||||+|++++|+.||+|||+|||+||||+.|
T Consensus 598 --~~GlRvLa~A~r~l~~~~~~~~~~~~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~t 675 (1053)
T TIGR01523 598 --AEGLRVLAFASKSFDKADNNDDQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPET 675 (1053)
T ss_pred --hcCCeEEEEEEEECCchhccchhhhccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHH
Confidence 9999999999998764321100 00 0011235689999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCC-----------ccccCCC------------------------------------------------
Q psy886 756 AEAICRRIGVFTEE-----------EDTTGKS------------------------------------------------ 776 (962)
Q Consensus 756 A~~IA~~~GI~~~~-----------~~~~g~~------------------------------------------------ 776 (962)
|.+||++|||.+++ ..++|++
T Consensus 676 A~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGv 755 (1053)
T TIGR01523 676 AKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGV 755 (1053)
T ss_pred HHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCc
Confidence 99999999997531 2233322
Q ss_pred -----CCcCcEEEecc-ChhHHHHhhcccccccCChhHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHh---
Q psy886 777 -----YSKAEIGIAMG-SGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAAL--- 847 (962)
Q Consensus 777 -----l~~AdVGIAmg-~gtdvAkeaADivL~dd~f~~iv~ai~~gR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~--- 847 (962)
|++|||||||| +|||+||++||+||+||||++|+++|++||++|+||+|++.|+|++|++++++++++.++
T Consensus 756 NDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~ 835 (1053)
T TIGR01523 756 NDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDE 835 (1053)
T ss_pred chHHHHHhCCccEecCCCccHHHHHhcCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcc
Confidence 24999999999 999999999999999999999999999999999999999999999999999999999988
Q ss_pred -CC-CccchhHH-H----hhCcccccccccCCCCcCccchh-------H-----HHHHHHHhhhHHhhhcCCCcEEEec-
Q psy886 848 -GL-PEALIKKI-S----TTNRGKKKKLSYNFLDISLLGPA-------I-----HYQVDLTGGPDQVYLSGLPDSIYYL- 907 (962)
Q Consensus 848 -~~-~~pl~~~q-L----~~d~~~a~al~~e~~~~~~m~~p-------~-----~~~~~~~~~~~~~~~~~~~~~~~~~- 907 (962)
|+ |.||+|+| | +||++|+++|++|||++++|+|| + ++++++.|...++.. ...|++
T Consensus 836 ~g~~~~Pl~~~qiL~inli~d~~palaL~~e~~~~~~m~~~Pr~~~~~l~~~~~~~~~~~~g~~~~~~~----l~~~~~~ 911 (1053)
T TIGR01523 836 NGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPDLMDRLPHDNEVGIFQKELIIDMFAYGFFLGGSC----LASFTGI 911 (1053)
T ss_pred cCCCcCchHHHHHHHHHHHHHHHHHHhhccCCCChhHHhcCCCCCCccccCHHHHHHHHHHHHHHHHHH----HHHHHHH
Confidence 44 58999999 3 99999999999999999999988 2 334444454222110 000100
Q ss_pred -cch--hhhhccccccCCCCccCCCccccccCccchhhHHHHHHHHHHHHHhhccCCC
Q psy886 908 -PTT--VFATHHMSCLGGGDEFKGLDCHIFHDPHPMTMALSVLVTIEMLNAMNRYGRH 962 (962)
Q Consensus 908 -~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~ 962 (962)
..+ ..+.+ .|.. .+ +..|. ...+|+|++|++++++|++|+||||+++
T Consensus 912 ~~~~~~~~~~~--~~~~---~~-~~~~~--~~~~a~t~~f~~l~~~~~~~~~~~r~~~ 961 (1053)
T TIGR01523 912 LYGFGSGNLGH--DCDA---HY-HAGCN--DVFKARSAAFATMTFCALILAVEVKDFD 961 (1053)
T ss_pred HHhccCccccc--cccc---cc-ccccc--chhhhHHHHHHHHHHHHHHHHHHHhcCc
Confidence 000 00000 1210 01 11121 2346899999999999999999999863
No 4
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.2e-113 Score=1057.17 Aligned_cols=710 Identities=36% Similarity=0.517 Sum_probs=563.5
Q ss_pred HHHHhhhhhhccCccccCCCChhHHHH-------HHHHHHHHHHHHHHHHhhhccccccccccchhHHHHHHHHHHHHHH
Q psy886 40 CRLRLRQIDFIPARVTSLSPSENVHIA-------STNFAVLFCLCPQVLALFEEHEDFNSTLTSFVEPFVILLILIANAI 112 (962)
Q Consensus 40 ~~~~~~~~~~g~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 112 (962)
..+..+...||.|.+...+....+... ...++..+++++.++..+.... .+...++.+++++.+
T Consensus 48 ~e~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~~~~~~~---------~~~~~I~~~i~~n~~ 118 (917)
T COG0474 48 EEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVGDWVDAG---------VDAIVILLVVVINAL 118 (917)
T ss_pred HHHHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccC---------cceeeehHHHHHHHH
Confidence 446677778999999866654333222 2333444444444443221110 344577788888889
Q ss_pred HHHHHHHHHHHHHHHHhccCCCeEEEEECCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeecccccCC
Q psy886 113 VGVWQERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGE 192 (962)
Q Consensus 113 ~~~~~~~~~~~~l~~l~~~~~~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lTGE 192 (962)
++.+||+|+++++++|+++.+..++|+|||+ ++
T Consensus 119 ~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~--~~--------------------------------------------- 151 (917)
T COG0474 119 LGFVQEYRAEKALEALKKMSSPKAKVLRDGK--FV--------------------------------------------- 151 (917)
T ss_pred HHHHHHHHHHHHHHHHHhhccCceEEEeCCc--EE---------------------------------------------
Confidence 9999999999999999999988899988887 44
Q ss_pred CcceeecCCCCCCcccccCCCccccccCccccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCC
Q psy886 193 SVSVIKHTDAVPDPRAEKNGPQMCENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGD 272 (962)
Q Consensus 193 s~Pv~k~~g~~~~~~~~~~~~~~~~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GD 272 (962)
+|++++|||||
T Consensus 152 ---------------------------------------------------------------------~i~a~eLVpGD 162 (917)
T COG0474 152 ---------------------------------------------------------------------EIPASELVPGD 162 (917)
T ss_pred ---------------------------------------------------------------------EecHHHCCCCc
Confidence 45555555555
Q ss_pred EEEeCCCCeecceEEEEeecCCeEEEEecCCCCCCcceeccCCCCCCCccCCC-CCcceEecCceeeeceEEEEEEEecc
Q psy886 273 IVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQ-DKKNILFSGTNVAAGKARGIVMGTGL 351 (962)
Q Consensus 273 IV~l~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~pv~K~~~~~~~~~~~~~-~~~n~v~aGT~v~~G~~~~vV~~tG~ 351 (962)
||++++||+||||+||+++ .+++||||+|||||.|+.|.+.+....+.+.. ++.|++|+||.|++|+++|+|++||+
T Consensus 163 iV~l~~gd~vPAD~rLl~~--~~l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~ 240 (917)
T COG0474 163 IVLLEAGDVVPADLRLLES--SDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGF 240 (917)
T ss_pred EEEECCCCccccceEEEEe--cCceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcC
Confidence 5555555555555555543 23689999999999999999887665555555 89999999999999999999999999
Q ss_pred chhhHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHhhcC
Q psy886 352 NTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVAAIP 431 (962)
Q Consensus 352 ~T~~gki~~~~~~~~~~~tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP 431 (962)
+|++||++.++.......||+|++++++...+..++++++++++++++... ..+| ...|+.++++++++||
T Consensus 241 ~T~~G~ia~~~~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~-----~~~~----~~~~~~~v~l~va~IP 311 (917)
T COG0474 241 ETEFGKIARLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRG-----GNGL----LESFLTALALAVAAVP 311 (917)
T ss_pred ccHHHHHHHhhccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CccH----HHHHHHHHHHHHhccc
Confidence 999999999998887789999999999999999999999988888763211 1113 3468899999999999
Q ss_pred CchHHHHHHHHHHHHHHHhhhcCccCCchhhhhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcceEEEeCCc
Q psy886 432 EGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGST 511 (962)
Q Consensus 432 ~~Lp~~v~i~l~~~~~~m~k~~ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (962)
||||+++++++++++++|+|++++||+++++|+||++++||||||||||+|+|+|++++..++.. .
T Consensus 312 egLp~~vti~la~g~~~mak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~--------------~ 377 (917)
T COG0474 312 EGLPAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGK--------------D 377 (917)
T ss_pred cchHHHHHHHHHHHHHHHHhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCcc--------------c
Confidence 99999999999999999999999999999999999999999999999999999999999874100 0
Q ss_pred cccCcceecCCCccCCCChHHHHHHHHHHhhccCCccccccccCceEEecChhHHHHHHHHHHcCCCCcccCCCchhhHH
Q psy886 512 YEPIGDVFLNGSKIKGADYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQA 591 (962)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~ 591 (962)
..+ ......+.+.+++..+++||+.....+ . ++..|||+|.||++++.+.|... .
T Consensus 378 ~~~----------~~~~~~~~~~~~l~~~~lc~~~~~~~~-~---~~~~gdptE~Al~~~a~~~~~~~-~---------- 432 (917)
T COG0474 378 IDD----------KDLKDSPALLRFLLAAALCNSVTPEKN-G---WYQAGDPTEGALVEFAEKLGFSL-D---------- 432 (917)
T ss_pred ccc----------cccccchHHHHHHHHHHhcCccccccc-C---ceecCCccHHHHHHHHHhcCCcC-C----------
Confidence 000 011122445577888999999877654 2 77899999999999999988622 1
Q ss_pred HhhhhHHhhhceeeEeecCCCCCceEEEEEecCCCCCCCCCCCEEEEeCChHHHHhcccccccCCeeeeCCHHHHHHHHH
Q psy886 592 IAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKFPLTATLKNRILD 671 (962)
Q Consensus 592 ~~~~~~~~~~~~~~~~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~~~~~~l~~~~~~~i~~ 671 (962)
.......++++.++||||+|||||++++..++ ++++++|||||.|+++|++. ++..+++++.++.+++
T Consensus 433 ---~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~------~~~~~~KGApe~il~~~~~~---~~~~~~~~~~~~~~~~ 500 (917)
T COG0474 433 ---LSGLEVEYPILAEIPFDSERKRMSVIVKTDEG------KYILFVKGAPEVILERCKSI---GELEPLTEEGLRTLEE 500 (917)
T ss_pred ---HHHHhhhcceeEEecCCCCceEEEEEEEcCCC------cEEEEEcCChHHHHHHhccc---CcccccCHHHHHHHHH
Confidence 11245667899999999999999999984331 48999999999999999987 6777899999999999
Q ss_pred HHHHHhcccchhheeeEEeeeCCCCccccccccccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEcCC
Q psy886 672 LTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGD 751 (962)
Q Consensus 672 ~~~~~~~~~~glRvl~~A~~~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD 751 (962)
..++|+ ++|||||++|||..+..+.+.. . +..|+||+|+|+++|+||||+||++||+.|++|||||||||||
T Consensus 501 ~~~~la--~~glRvla~A~k~~~~~~~~~~-----~-~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD 572 (917)
T COG0474 501 AVKELA--SEGLRVLAVAYKKLDRAEKDDE-----V-DEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGD 572 (917)
T ss_pred HHHHHH--HHHHHHHHHHhccCCcccccch-----h-hhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCC
Confidence 999996 9999999999997654433211 1 4678999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHcCCCCCCc---cccCCCC---------------------------------------------------
Q psy886 752 NKATAEAICRRIGVFTEEE---DTTGKSY--------------------------------------------------- 777 (962)
Q Consensus 752 ~~~TA~~IA~~~GI~~~~~---~~~g~~l--------------------------------------------------- 777 (962)
|++||++||++|||..+.. .++|.++
T Consensus 573 ~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvNDap 652 (917)
T COG0474 573 HVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAP 652 (917)
T ss_pred CHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhHH
Confidence 9999999999999977642 5667654
Q ss_pred --CcCcEEEecc-ChhHHHHhhcccccccCChhHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhCCC-ccc
Q psy886 778 --SKAEIGIAMG-SGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAALGLP-EAL 853 (962)
Q Consensus 778 --~~AdVGIAmg-~gtdvAkeaADivL~dd~f~~iv~ai~~gR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~-~pl 853 (962)
++|||||||| +|||+||+||||||+||||++|+.+|+|||++|+||+|++.|.+++|++++++++++.+++.+ .||
T Consensus 653 ALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~p~ 732 (917)
T COG0474 653 ALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFLPL 732 (917)
T ss_pred HHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccH
Confidence 4999999999 899999999999999999999999999999999999999999999999999999999999988 999
Q ss_pred hhHH-H----hhCcccccccccCCCCcCccchh------------HHHHHHHH-hhhHHhhhcCCCcEEEeccchhhhhc
Q psy886 854 IKKI-S----TTNRGKKKKLSYNFLDISLLGPA------------IHYQVDLT-GGPDQVYLSGLPDSIYYLPTTVFATH 915 (962)
Q Consensus 854 ~~~q-L----~~d~~~a~al~~e~~~~~~m~~p------------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (962)
+|+| | ++|++|+++|+.++|+.++|++| +++++++. |....+.. ..+|.+ ... .
T Consensus 733 ~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~p~~~i~~~~~~~~~i~~~~~~~~i~~----~~~~~~---~~~-~ 804 (917)
T COG0474 733 TPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLLSAILF----ILTFLL---YLL-G 804 (917)
T ss_pred HHHHHHHHHHHHhhhhhheeecCCCcccccccCCCCccccccchhHHHHHHHHHHHHHHHHH----HHHHHH---HHH-h
Confidence 9999 3 99999999999999999999887 25664443 33221110 000000 000 0
Q ss_pred cccccCCCCccCCCccccccCccchhhHHHHHHHHHHHHHhhccCC
Q psy886 916 HMSCLGGGDEFKGLDCHIFHDPHPMTMALSVLVTIEMLNAMNRYGR 961 (962)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~ 961 (962)
..+ ...+... ....++|++|+.++++|+++++++|+.
T Consensus 805 ~~~------~~~~~~~---~~~~~~t~~f~~~~~~~~~~~~~~~~~ 841 (917)
T COG0474 805 FIA------NTLGLDL---FQALLQTTAFTVLVLIQLLLTLAVRSR 841 (917)
T ss_pred ccc------cccchhh---HHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 000 0000000 134578999999999999999999985
No 5
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=7.6e-111 Score=1041.71 Aligned_cols=753 Identities=60% Similarity=0.910 Sum_probs=579.7
Q ss_pred HHHHHHHHHHHHHHHHhhhccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCCccE
Q psy886 67 STNFAVLFCLCPQVLALFEEHEDFNSTLTSFVEPFVILLILIANAIVGVWQERNAESAIEALKEYEPEMGKVIRGDKSGV 146 (962)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~r~~~~~~ 146 (962)
...+++++++++++++.+... ......|.++++++++++++..++.++|+|+++++++|.++.+.+++|+|||+ +
T Consensus 9 ~~~iL~~aa~ls~~~~~~~~~---~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRdg~--~ 83 (917)
T TIGR01116 9 LVRILLLAACVSFVLAWFEEG---EETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRDGR--W 83 (917)
T ss_pred HHHHHHHHHHHHHHHhccccc---ccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEECCE--E
Confidence 456666777777766543211 11234688999999999999999999999999999999999999999999998 7
Q ss_pred EEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeecccccCCCcceeecCCCCCCcccccCCCccccccCcccccc
Q psy886 147 QKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAEKNGPQMCENDRNEHKCG 226 (962)
Q Consensus 147 ~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lTGEs~Pv~k~~g~~~~~~~~~~~~~~~~~~~~~~~~g 226 (962)
++|+++||+|||+|.|++||+|||||+|++| .++.||||+|||||.|+.|.++..+
T Consensus 84 ~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~--~~l~VdeS~LTGES~pv~K~~~~~~---------------------- 139 (917)
T TIGR01116 84 SVIKAKDLVPGDIVELAVGDKVPADIRVLSL--KTLRVDQSILTGESVSVNKHTESVP---------------------- 139 (917)
T ss_pred EEEEHHHCCCCCEEEECCCCEeeccEEEEEe--cceEEEcccccCCCCcccccccccC----------------------
Confidence 9999999999999999999999999999975 3567888888888888888655210
Q ss_pred chhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEEEeCCCCeecceEEEEeecCCeEEEEecCCCCC
Q psy886 227 RMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGE 306 (962)
Q Consensus 227 r~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGE 306 (962)
T Consensus 140 -------------------------------------------------------------------------------- 139 (917)
T TIGR01116 140 -------------------------------------------------------------------------------- 139 (917)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEeccchhhHHHHhhccccccCCCchHHHHHHHHHHHHHH
Q psy886 307 SVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKV 386 (962)
Q Consensus 307 s~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~T~~gki~~~~~~~~~~~tplq~~l~~~~~~l~~~ 386 (962)
+......+++|++|+||.+.+|+++++|++||.+|++|||.+++...+.++||+|+++++++..++.+
T Consensus 140 ------------~~~~~~~~~~n~l~~GT~v~~G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~ 207 (917)
T TIGR01116 140 ------------DERAVNQDKKNMLFSGTLVVAGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKV 207 (917)
T ss_pred ------------ccccCcccccceeeeCCEEecceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHH
Confidence 00001134569999999999999999999999999999999999988889999999999999999888
Q ss_pred HHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhhhcCccCCchhhhhcC
Q psy886 387 ISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLG 466 (962)
Q Consensus 387 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~Lp~~v~i~l~~~~~~m~k~~ilvr~~~~~E~LG 466 (962)
++++++++|+++...+.....+..|...+...+..++++++++|||+||+++++++++++++|+++|++||+++++|+||
T Consensus 208 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg 287 (917)
T TIGR01116 208 IGLICILVWVINIGHFNDPALGGGWIQGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLG 287 (917)
T ss_pred HHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhcc
Confidence 88777777766533322222233565555667778899999999999999999999999999999999999999999999
Q ss_pred CeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcceEEEeCCccccCcceecCCCccCCCChHHHHHHHHHHhhccCC
Q psy886 467 CTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKIKGADYETLHELGTICIMCNDS 546 (962)
Q Consensus 467 ~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lcn~~ 546 (962)
++++||||||||||+|+|+|.+++..+..+. ....+..++..|+|.+....+.........+.+..++.++++||++
T Consensus 288 ~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~ 364 (917)
T TIGR01116 288 CTTVICSDKTGTLTTNQMSVCKVVALDPSSS---SLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDS 364 (917)
T ss_pred CceEEEecCCccccCCeEEEEEEEecCCccc---ccceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999998764331 1234555666676654322111111111224456777889999998
Q ss_pred ccccccccCceEEecChhHHHHHHHHHHcCCCCcccCCCchhhHHHhhhhHHhhhceeeEeecCCCCCceEEEEEecCCC
Q psy886 547 AIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKS 626 (962)
Q Consensus 547 ~~~~~~~~~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvv~~~~~~ 626 (962)
....+.....+...|||+|.||+.++.+.|......................++.|++++++||||+|||||++++..+
T Consensus 365 ~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~~~- 443 (917)
T TIGR01116 365 SLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKPST- 443 (917)
T ss_pred eeeccccCCceeeccChhHHHHHHHHHHcCCCchhcccccccccccchhHHHHhhcceeeecccChhhCeEEEEEeeCC-
Confidence 7654332233556799999999999999886432211000000000001123456889999999999999999998532
Q ss_pred CCCCCCCCEEEEeCChHHHHhcccccccC-CeeeeCCHHHHHHHHHHHHHHhccc-chhheeeEEeeeCCCCcccccccc
Q psy886 627 SKLGSSGPKLFVKGAPEGVLERCTHARIG-SQKFPLTATLKNRILDLTRQYGTGR-DTLRCLGLATADNPLKPEDMNLAD 704 (962)
Q Consensus 627 ~~~~~~~~~~~~KGA~e~il~~c~~~~~~-~~~~~l~~~~~~~i~~~~~~~~~~~-~glRvl~~A~~~~~~~~~~~~~~~ 704 (962)
++++|+|||||.|+++|+++..+ +...+++++.++++.+..++|+ + +|+||+++|||+++.+.......+
T Consensus 444 ------~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a--~~~GlRvl~~A~k~~~~~~~~~~~~~ 515 (917)
T TIGR01116 444 ------GNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMG--TTKALRCLALAFKDIPDPREEDLLSD 515 (917)
T ss_pred ------cEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHHHHHHHHHHHH--hhcCCeEEEEEEEECCcccccccccc
Confidence 67899999999999999987654 6778999999999999999986 7 999999999998764322111111
Q ss_pred ccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCc-----cccCC----
Q psy886 705 STKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEE-----DTTGK---- 775 (962)
Q Consensus 705 ~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~~~-----~~~g~---- 775 (962)
...++.+|+||+|+|+++++||||+|++++|+.||+|||++||+||||++||.+||+++||..++. ..+|+
T Consensus 516 ~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~ 595 (917)
T TIGR01116 516 PANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDE 595 (917)
T ss_pred chhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhh
Confidence 223346789999999999999999999999999999999999999999999999999999976432 11221
Q ss_pred -------------------------------------------------CCCcCcEEEeccChhHHHHhhcccccccCCh
Q psy886 776 -------------------------------------------------SYSKAEIGIAMGSGTAVAKSASEMVLADDNF 806 (962)
Q Consensus 776 -------------------------------------------------~l~~AdVGIAmg~gtdvAkeaADivL~dd~f 806 (962)
++++||||||||+|+|+||++||+||.||||
T Consensus 596 ~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~g~g~~~ak~aAD~vl~dd~f 675 (917)
T TIGR01116 596 MGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNF 675 (917)
T ss_pred CCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEECCCCcHHHHHhcCeEEccCCH
Confidence 1259999999999999999999999999999
Q ss_pred hHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhCCCccchhHH-H----hhCcccccccccCCCCcCccchh
Q psy886 807 SSIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAALGLPEALIKKI-S----TTNRGKKKKLSYNFLDISLLGPA 881 (962)
Q Consensus 807 ~~iv~ai~~gR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~q-L----~~d~~~a~al~~e~~~~~~m~~p 881 (962)
++|++++++||++|+||+|++.|.++.|++++++++++.++++|.||+|+| | ++|.+|+++|++|||++++|+||
T Consensus 676 ~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~p 755 (917)
T TIGR01116 676 ATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALGIPEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKP 755 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCC
Confidence 999999999999999999999999999999999999999999999999999 3 89999999999999999999888
Q ss_pred ------------HHHHHHHHhhhHHhhhcCCCcEEEeccchhhhhcc--------ccccCCCCccCCCccccc-cCccch
Q psy886 882 ------------IHYQVDLTGGPDQVYLSGLPDSIYYLPTTVFATHH--------MSCLGGGDEFKGLDCHIF-HDPHPM 940 (962)
Q Consensus 882 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~-~~~~~~ 940 (962)
.++++++.|+..++.. ...|++. ....+. .+|.. +.+..+..+ ....++
T Consensus 756 P~~~~~~l~~~~~~~~~~~~g~~~~~~~----~~~~~~~--~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 825 (917)
T TIGR01116 756 PRRPDEPLITGWLFFRYLVVGVYVGLAT----VGGFVWW--YLLTHFTGCDEDSFTTCPD----FEDPDCYVFEGKQPAR 825 (917)
T ss_pred CCCCCCCcccHHHHHHHHHHHHHHHHHH----HHHHHHH--HhhcCcccccccccccccc----cccccccccccccchH
Confidence 2445555554211100 0000000 000000 01110 011000000 134688
Q ss_pred hhHHHHHHHHHHHHHhhccCCC
Q psy886 941 TMALSVLVTIEMLNAMNRYGRH 962 (962)
Q Consensus 941 t~~f~~~~~~~~~~~~~~r~~~ 962 (962)
||+|++|+++|+||+||||+++
T Consensus 826 t~~f~~~v~~q~~~~~~~r~~~ 847 (917)
T TIGR01116 826 TISLSVLVVIEMFNALNALSED 847 (917)
T ss_pred HHHHHHHHHHHHHHHHHHcCCc
Confidence 9999999999999999999963
No 6
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=6e-108 Score=1005.58 Aligned_cols=688 Identities=22% Similarity=0.336 Sum_probs=523.6
Q ss_pred HHHHhhhhhhccCccccCCCChhHHHH---HHHHHHHHHHHHHHHHhhhccccccccccchhHHHHHHHHHHHHHHHHHH
Q psy886 40 CRLRLRQIDFIPARVTSLSPSENVHIA---STNFAVLFCLCPQVLALFEEHEDFNSTLTSFVEPFVILLILIANAIVGVW 116 (962)
Q Consensus 40 ~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 116 (962)
..+..+...||+|.+..+++...+... +.++..++.+++.++.++ .+.|.++++++++++++.+++++
T Consensus 71 ~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~---------~~~~~~a~~I~~iv~i~~~i~~~ 141 (902)
T PRK10517 71 AEVESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYA---------TEDLFAAGVIALMVAISTLLNFI 141 (902)
T ss_pred HHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHH---------HccHHHHHHHHHHHHHHHHHHHH
Confidence 346778888999999888775443322 333332222222211111 12577889999999999999999
Q ss_pred HHHHHHHHHHHHhccCCCeEEEEECCC----ccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeecccccCC
Q psy886 117 QERNAESAIEALKEYEPEMGKVIRGDK----SGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGE 192 (962)
Q Consensus 117 ~~~~~~~~l~~l~~~~~~~~~v~r~~~----~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lTGE 192 (962)
+|+|+++++++|+++.+.+++|+|||+ .++++|++++|+|||+|.|++||+|||||+|++| .++.||||+||||
T Consensus 142 qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaDg~li~g--~~l~VDES~LTGE 219 (902)
T PRK10517 142 QEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQA--RDLFVAQASLTGE 219 (902)
T ss_pred HHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeeeEEEEEc--CceEEEecCcCCC
Confidence 999999999999999999999999953 1156666666666666666666666666666653 2344666666666
Q ss_pred CcceeecCCCCCCcccccCCCccccccCccccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCC
Q psy886 193 SVSVIKHTDAVPDPRAEKNGPQMCENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGD 272 (962)
Q Consensus 193 s~Pv~k~~g~~~~~~~~~~~~~~~~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GD 272 (962)
|.||+|.+++
T Consensus 220 S~PV~K~~~~---------------------------------------------------------------------- 229 (902)
T PRK10517 220 SLPVEKFATT---------------------------------------------------------------------- 229 (902)
T ss_pred CCceeccccc----------------------------------------------------------------------
Confidence 6666665442
Q ss_pred EEEeCCCCeecceEEEEeecCCeEEEEecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEeccc
Q psy886 273 IVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLN 352 (962)
Q Consensus 273 IV~l~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~ 352 (962)
..+......+++|++|+||.|.+|+++++|++||.+
T Consensus 230 --------------------------------------------~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~ 265 (902)
T PRK10517 230 --------------------------------------------RQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGAN 265 (902)
T ss_pred --------------------------------------------ccccccCccccccceeeCceEeeeeEEEEEEEeccc
Confidence 111112234567999999999999999999999999
Q ss_pred hhhHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHhhcCC
Q psy886 353 TAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVAAIPE 432 (962)
Q Consensus 353 T~~gki~~~~~~~~~~~tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~ 432 (962)
|++|||++++.+++.+++|+|+.++++++++..++++++.++++++.. ...+|. ..+..++++++++|||
T Consensus 266 T~~GkI~~~v~~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~------~~~~~~----~~l~~alsv~V~~~Pe 335 (902)
T PRK10517 266 TWFGQLAGRVSEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLINGY------TKGDWW----EAALFALSVAVGLTPE 335 (902)
T ss_pred cHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHH------hcCCHH----HHHHHHHHHHHHHccc
Confidence 999999999998888899999999999999988887777766655421 112343 3577899999999999
Q ss_pred chHHHHHHHHHHHHHHHhhhcCccCCchhhhhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcceEEEeCCcc
Q psy886 433 GLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTY 512 (962)
Q Consensus 433 ~Lp~~v~i~l~~~~~~m~k~~ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (962)
+||++++++++.++++|+|+|++||+++++|+||++|+||||||||||+|+|+|.+++...+
T Consensus 336 ~LP~~vt~~la~g~~~mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~~------------------ 397 (902)
T PRK10517 336 MLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDISG------------------ 397 (902)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecCCC------------------
Confidence 99999999999999999999999999999999999999999999999999999987632110
Q ss_pred ccCcceecCCCccCCCChHHHHHHHHHHhhccCCccccccccCceEEecChhHHHHHHHHHHcCCCCcccCCCchhhHHH
Q psy886 513 EPIGDVFLNGSKIKGADYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQAI 592 (962)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~ 592 (962)
.+.+ +++..+++|... . ...|||+|.|++.++.+.+.
T Consensus 398 ---------------~~~~---~ll~~a~l~~~~--~--------~~~~~p~d~All~~a~~~~~--------------- 434 (902)
T PRK10517 398 ---------------KTSE---RVLHSAWLNSHY--Q--------TGLKNLLDTAVLEGVDEESA--------------- 434 (902)
T ss_pred ---------------CCHH---HHHHHHHhcCCc--C--------CCCCCHHHHHHHHHHHhcch---------------
Confidence 0011 223333443321 1 11589999999998765321
Q ss_pred hhhhHHhhhceeeEeecCCCCCceEEEEEecCCCCCCCCCCCEEEEeCChHHHHhcccccccCCeeeeCCHHHHHHHHHH
Q psy886 593 AVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKFPLTATLKNRILDL 672 (962)
Q Consensus 593 ~~~~~~~~~~~~~~~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~ 672 (962)
......|+++.++||||+||+|+++++..++ ...+++|||||.++++|+++..++...+++++.++++.+.
T Consensus 435 ---~~~~~~~~~~~~~pFds~~k~msvvv~~~~~------~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~ 505 (902)
T PRK10517 435 ---RSLASRWQKIDEIPFDFERRRMSVVVAENTE------HHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRV 505 (902)
T ss_pred ---hhhhhcCceEEEeeeCCCcceEEEEEEECCC------eEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHH
Confidence 0134567889999999999999999874321 4679999999999999999888888889999989899888
Q ss_pred HHHHhcccchhheeeEEeeeCCCCccccccccccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEcCCC
Q psy886 673 TRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDN 752 (962)
Q Consensus 673 ~~~~~~~~~glRvl~~A~~~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~ 752 (962)
.++++ ++|+|++++|||+.+..+.+.. ...|+|++|+|+++|+||||||++++|++||++||+|+||||||
T Consensus 506 ~~~~a--~~G~rvlavA~k~~~~~~~~~~-------~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~ 576 (902)
T PRK10517 506 TDTLN--RQGLRVVAVATKYLPAREGDYQ-------RADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDS 576 (902)
T ss_pred HHHHH--hcCCEEEEEEEecCCccccccc-------cccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCC
Confidence 88885 8999999999998754322110 11368999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCC----------------------------------------------------CccccCCCCCcC
Q psy886 753 KATAEAICRRIGVFTE----------------------------------------------------EEDTTGKSYSKA 780 (962)
Q Consensus 753 ~~TA~~IA~~~GI~~~----------------------------------------------------~~~~~g~~l~~A 780 (962)
+.||.+||+++||..+ |+.++.++|++|
T Consensus 577 ~~tA~~IA~~lGI~~~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~A 656 (902)
T PRK10517 577 ELVAAKVCHEVGLDAGEVLIGSDIETLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAA 656 (902)
T ss_pred HHHHHHHHHHcCCCccCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhC
Confidence 9999999999999521 112233345799
Q ss_pred cEEEeccChhHHHHhhcccccccCChhHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhCCCccchhHH-H-
Q psy886 781 EIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAALGLPEALIKKI-S- 858 (962)
Q Consensus 781 dVGIAmg~gtdvAkeaADivL~dd~f~~iv~ai~~gR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~q-L- 858 (962)
|||||||+|||+||+||||||+||||++|+++|++||++|+||+|++.|++++|++++++++++.++..++||+|+| |
T Consensus 657 DVGIAmg~gtdvAkeaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~ 736 (902)
T PRK10517 657 DIGISVDGAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLI 736 (902)
T ss_pred CEEEEeCCcCHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999988885448999999 3
Q ss_pred ---hhCcccccccccCCCCcCccchh------HHHH-HHHHhhhHHhhhcCCCcEEEeccchhhhhccccccCCCCccCC
Q psy886 859 ---TTNRGKKKKLSYNFLDISLLGPA------IHYQ-VDLTGGPDQVYLSGLPDSIYYLPTTVFATHHMSCLGGGDEFKG 928 (962)
Q Consensus 859 ---~~d~~~a~al~~e~~~~~~m~~p------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 928 (962)
+|| +|++||++|||++++|+|| .+.+ .++.|....++. ..+|+ .+++.+.
T Consensus 737 inl~~D-~~~~al~~d~~~~~~m~~p~r~~~~~~~~~~~~~g~~~~~~~----~~~~~-----~~~~~~~---------- 796 (902)
T PRK10517 737 QNLLYD-VSQVAIPFDNVDDEQIQKPQRWNPADLGRFMVFFGPISSIFD----ILTFC-----LMWWVFH---------- 796 (902)
T ss_pred HHHHHH-HhHHhhcCCCCChhhhcCCCCCCHHHHHHHHHHHHHHHHHHH----HHHHH-----HHHHHcc----------
Confidence 999 7999999999999999998 2333 444444322111 00011 0111110
Q ss_pred CccccccCccchhhHHHHHHHHHHHHHhhccCCC
Q psy886 929 LDCHIFHDPHPMTMALSVLVTIEMLNAMNRYGRH 962 (962)
Q Consensus 929 ~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~ 962 (962)
...+... ...+|..|++++++|+||+||+|+++
T Consensus 797 ~~~~~~~-~~~~~~~F~~~~~~q~~~~~~~R~~~ 829 (902)
T PRK10517 797 ANTPETQ-TLFQSGWFVVGLLSQTLIVHMIRTRR 829 (902)
T ss_pred ccchhhH-hHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 0000000 01223459999999999999999863
No 7
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=1e-106 Score=1010.92 Aligned_cols=672 Identities=31% Similarity=0.457 Sum_probs=527.9
Q ss_pred HHHhhhhhhccCccccCCCChhHHHH-------HHHHHHHHHHHHHHHHhhhccccccccccchhHHHHHHHHHHHHHHH
Q psy886 41 RLRLRQIDFIPARVTSLSPSENVHIA-------STNFAVLFCLCPQVLALFEEHEDFNSTLTSFVEPFVILLILIANAIV 113 (962)
Q Consensus 41 ~~~~~~~~~g~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 113 (962)
.+-.+...||.|.+..+++...++.. +..+++++++++++++.+...........+|.++++++++++++.++
T Consensus 41 e~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~i 120 (997)
T TIGR01106 41 RAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQASTEEEPQNDNLYLGVVLSAVVIITGCF 120 (997)
T ss_pred HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccCCCcccccHHHHHHHHHHHHHHHHH
Confidence 47778888999998766555333222 33444455555444433321111111224678889999999999999
Q ss_pred HHHHHHHHHHHHHHHhccCCCeEEEEECCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeecccccCCC
Q psy886 114 GVWQERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGES 193 (962)
Q Consensus 114 ~~~~~~~~~~~l~~l~~~~~~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lTGEs 193 (962)
+.++++|+++++++|.++.|.+++|+|||+ +++|++++|+|||+|.|+
T Consensus 121 ~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~--~~~I~~~~lv~GDiv~l~------------------------------ 168 (997)
T TIGR01106 121 SYYQEAKSSKIMESFKNMVPQQALVIRDGE--KMSINAEQVVVGDLVEVK------------------------------ 168 (997)
T ss_pred HHHHHHHHHHHHHHHhccCCCeeEEEECCE--EEEeeHHHCCCCCEEEEC------------------------------
Confidence 999999999999999999999999999987 455555555555555554
Q ss_pred cceeecCCCCCCcccccCCCccccccCccccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCE
Q psy886 194 VSVIKHTDAVPDPRAEKNGPQMCENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDI 273 (962)
Q Consensus 194 ~Pv~k~~g~~~~~~~~~~~~~~~~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDI 273 (962)
T Consensus 169 -------------------------------------------------------------------------------- 168 (997)
T TIGR01106 169 -------------------------------------------------------------------------------- 168 (997)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEeCCCCeecceEEEEeecCCeEEEEecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEeccch
Q psy886 274 VEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLNT 353 (962)
Q Consensus 274 V~l~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~T 353 (962)
+||+|||||++++ +..+.||||+|||||.|+.|.++.. ...+.+.+|++|+||.|.+|+++++|++||.+|
T Consensus 169 ----~Gd~IPaD~~il~--~~~l~VdeS~LTGES~pv~K~~~~~---~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T 239 (997)
T TIGR01106 169 ----GGDRIPADLRIIS--AQGCKVDNSSLTGESEPQTRSPEFT---HENPLETRNIAFFSTNCVEGTARGIVVNTGDRT 239 (997)
T ss_pred ----CCCEEeeeEEEEE--ccCcEEEccccCCCCCceeccCCCc---ccCccccCCeEEeccEeeeeeEEEEEEEccccc
Confidence 4555555555554 2357899999999999999987532 122347889999999999999999999999999
Q ss_pred hhHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHhhcCCc
Q psy886 354 AIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVAAIPEG 433 (962)
Q Consensus 354 ~~gki~~~~~~~~~~~tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~ 433 (962)
++||+++++.+.+.+++|+|++++++++.+..+++++++++++++.. .+..|. ..+..++++++++|||+
T Consensus 240 ~~g~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~----~~~~~~i~v~v~~iP~~ 309 (997)
T TIGR01106 240 VMGRIASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLI------LGYTWL----EAVIFLIGIIVANVPEG 309 (997)
T ss_pred hhhHHHhhhhhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------hcCCHH----HHHHHHHHHHhhcCCcc
Confidence 99999999988888899999999999999998887777776665431 122343 35667889999999999
Q ss_pred hHHHHHHHHHHHHHHHhhhcCccCCchhhhhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcceEEEeCCccc
Q psy886 434 LPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYE 513 (962)
Q Consensus 434 Lp~~v~i~l~~~~~~m~k~~ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (962)
||++++++++.++++|+++|++||+++++|+||++++||||||||||+|+|+|++++..+..+..+.. +.
T Consensus 310 L~~~v~i~l~~~~~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~----------~~ 379 (997)
T TIGR01106 310 LLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTT----------ED 379 (997)
T ss_pred chHHHHHHHHHHHHHHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCc----------cC
Confidence 99999999999999999999999999999999999999999999999999999999986643321100 00
Q ss_pred cCcceecCCCccCCCChHHHHHHHHHHhhccCCcccccccc---CceEEecChhHHHHHHHHHHcCCCCcccCCCchhhH
Q psy886 514 PIGDVFLNGSKIKGADYETLHELGTICIMCNDSAIDFNEFK---QAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQ 590 (962)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~lcn~~~~~~~~~~---~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~~~~~~ 590 (962)
+.+.. . ..+......++.++++||++....+... ..++..|||+|.||++++.+.+...
T Consensus 380 ~~~~~------~-~~~~~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~----------- 441 (997)
T TIGR01106 380 QSGVS------F-DKSSATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSV----------- 441 (997)
T ss_pred CCCcc------C-CcccHHHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCH-----------
Confidence 10000 0 0111334567778899998765432111 1235679999999999998654310
Q ss_pred HHhhhhHHhhhceeeEeecCCCCCceEEEEEecCCCCCCCCCCCEEEEeCChHHHHhcccccccCCeeeeCCHHHHHHHH
Q psy886 591 AIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKFPLTATLKNRIL 670 (962)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~~~~~~l~~~~~~~i~ 670 (962)
...+..|+++.++||+|+||||+++++..+. +++.+++|+|||||.|+++|+++..+++..+++++.++++.
T Consensus 442 -----~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~---~~~~~~~~~KGApe~Il~~c~~~~~~g~~~~l~~~~~~~~~ 513 (997)
T TIGR01106 442 -----MEMRERNPKVVEIPFNSTNKYQLSIHENEDP---RDPRHLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQ 513 (997)
T ss_pred -----HHHHhhCceeEEeccCCCCceEEEEEeccCC---CCceEEEEEeCChHHHHHHhhHHhcCCCcccCCHHHHHHHH
Confidence 1135668899999999999999998764221 11257899999999999999988888888899999999999
Q ss_pred HHHHHHhcccchhheeeEEeeeCCCCcccccc-ccccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEc
Q psy886 671 DLTRQYGTGRDTLRCLGLATADNPLKPEDMNL-ADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVIT 749 (962)
Q Consensus 671 ~~~~~~~~~~~glRvl~~A~~~~~~~~~~~~~-~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiT 749 (962)
+..++++ ++|+||+++|||+++.++..... .+....+..|+||+|+|+++++||||+|++++|++|+++||+|+|+|
T Consensus 514 ~~~~~~a--~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~T 591 (997)
T TIGR01106 514 NAYLELG--GLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVT 591 (997)
T ss_pred HHHHHHH--hcCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEEEeccCCChHHHHHHHHHHHHCCCeEEEEC
Confidence 9999996 89999999999987643211100 01111123489999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHcCCCCCCc-------------------------cccCCCC---------------------------
Q psy886 750 GDNKATAEAICRRIGVFTEEE-------------------------DTTGKSY--------------------------- 777 (962)
Q Consensus 750 GD~~~TA~~IA~~~GI~~~~~-------------------------~~~g~~l--------------------------- 777 (962)
||++.||.++|+++||++++. .++|+++
T Consensus 592 Gd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l~~~el~~~~~~~~~~VfaR~sPeq 671 (997)
T TIGR01106 592 GDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLDEILKYHTEIVFARTSPQQ 671 (997)
T ss_pred CCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhCCHHHHHHHHHhcCCEEEEECCHHH
Confidence 999999999999999975321 2233221
Q ss_pred ----------------------------CcCcEEEecc-ChhHHHHhhcccccccCChhHHHHHHHHhHHHHHHHHHHHH
Q psy886 778 ----------------------------SKAEIGIAMG-SGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIR 828 (962)
Q Consensus 778 ----------------------------~~AdVGIAmg-~gtdvAkeaADivL~dd~f~~iv~ai~~gR~i~~ni~k~i~ 828 (962)
++|||||||| +|+|+||+|||+||+||||++|+++|+|||++|+||+|++.
T Consensus 672 K~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~~Iv~ai~~GR~i~~ni~k~i~ 751 (997)
T TIGR01106 672 KLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIA 751 (997)
T ss_pred HHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4999999999 89999999999999999999999999999999999999999
Q ss_pred HHHHhhHHHHHHHHHHHHhCCCccchhHH-H----hhCcccccccccCCCCcCccchh
Q psy886 829 YLISSNIGEVVSIFLTAALGLPEALIKKI-S----TTNRGKKKKLSYNFLDISLLGPA 881 (962)
Q Consensus 829 ~~l~~ni~~~~~~~~~~~~~~~~pl~~~q-L----~~d~~~a~al~~e~~~~~~m~~p 881 (962)
|+++.|++++++++++.+++.|+||+|+| | ++|++|+++|++|||++++|+||
T Consensus 752 ~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL~inli~d~lp~~al~~e~~~~~~m~~~ 809 (997)
T TIGR01106 752 YTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDMVPAISLAYEKAESDIMKRQ 809 (997)
T ss_pred HHHHhhHHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCC
Confidence 99999999999999999999999999999 3 99999999999999999999866
No 8
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=2.3e-106 Score=993.46 Aligned_cols=706 Identities=24% Similarity=0.339 Sum_probs=537.7
Q ss_pred HHHHhhhhhhccCccccCCCChhHHHH-------HHHHHHHHHHHHHHHHhhhccccccccccchhHHHHHHHHHHHHHH
Q psy886 40 CRLRLRQIDFIPARVTSLSPSENVHIA-------STNFAVLFCLCPQVLALFEEHEDFNSTLTSFVEPFVILLILIANAI 112 (962)
Q Consensus 40 ~~~~~~~~~~g~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 112 (962)
..+-.+...||+|.+..+++...++.. +..++++++++++++..+... ..+....|.++++++++++++.+
T Consensus 49 ~ea~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~--~~~~~~~~~~~~iI~~~v~l~~~ 126 (903)
T PRK15122 49 EDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPL--RRGEETDLTGVIIILTMVLLSGL 126 (903)
T ss_pred HHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhc--cCCccccHhHHHHHHHHHHHHHH
Confidence 357788889999999876654332221 334444555555544333211 11222368899999999999999
Q ss_pred HHHHHHHHHHHHHHHHhccCCCeEEEEECCC----ccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeeccc
Q psy886 113 VGVWQERNAESAIEALKEYEPEMGKVIRGDK----SGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSI 188 (962)
Q Consensus 113 ~~~~~~~~~~~~l~~l~~~~~~~~~v~r~~~----~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~ 188 (962)
+++++|+|+++++++|+++.+.+++|+|||+ .++++||+++|+|||+|.|++||+|||||+|++| .++.||||+
T Consensus 127 i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg~li~g--~~l~VDES~ 204 (903)
T PRK15122 127 LRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIES--RDLFISQAV 204 (903)
T ss_pred HHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEc--CceEEEccc
Confidence 9999999999999999999999999999962 1278899999999999999999999999999974 346688999
Q ss_pred ccCCCcceeecCCCCCCcccccCCCccccccCccccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeeccccc
Q psy886 189 LTGESVSVIKHTDAVPDPRAEKNGPQMCENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEI 268 (962)
Q Consensus 189 lTGEs~Pv~k~~g~~~~~~~~~~~~~~~~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~L 268 (962)
|||||.||+|.+...+....
T Consensus 205 LTGES~PV~K~~~~~~~~~~------------------------------------------------------------ 224 (903)
T PRK15122 205 LTGEALPVEKYDTLGAVAGK------------------------------------------------------------ 224 (903)
T ss_pred cCCCCcceeeeccccccccc------------------------------------------------------------
Confidence 99999888886420000000
Q ss_pred CCCCEEEeCCCCeecceEEEEeecCCeEEEEecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEE
Q psy886 269 VPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMG 348 (962)
Q Consensus 269 v~GDIV~l~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~ 348 (962)
+.. ...++ .....+++|++|+||.|.+|+++++|++
T Consensus 225 ------------------------~~~------~~~~~--------------~~~~~~~~n~vfaGT~V~~G~~~~~V~a 260 (903)
T PRK15122 225 ------------------------SAD------ALADD--------------EGSLLDLPNICFMGTNVVSGTATAVVVA 260 (903)
T ss_pred ------------------------ccc------ccccc--------------cCCcccccceEEeCCEEEeeeEEEEEEE
Confidence 000 00000 1122456799999999999999999999
Q ss_pred eccchhhHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHh
Q psy886 349 TGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVA 428 (962)
Q Consensus 349 tG~~T~~gki~~~~~~~~~~~tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~ 428 (962)
||.+|++|||++++.+ +..++|+|++++++++++..++++++.+++++... ...+|. ..+..+++++++
T Consensus 261 tG~~T~~gkI~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~------~~~~~~----~~l~~aisl~V~ 329 (903)
T PRK15122 261 TGSRTYFGSLAKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGF------TKGDWL----EALLFALAVAVG 329 (903)
T ss_pred eccccHhhHHHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhh------ccCCHH----HHHHHHHHHHHH
Confidence 9999999999999877 56789999999999998888776666655544321 112343 357789999999
Q ss_pred hcCCchHHHHHHHHHHHHHHHhhhcCccCCchhhhhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcceEEEe
Q psy886 429 AIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEIT 508 (962)
Q Consensus 429 ~iP~~Lp~~v~i~l~~~~~~m~k~~ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~ 508 (962)
+|||+||++++++++.++++|+|+|++||+++++|+||++|+||||||||||+|+|+|.+++..++.
T Consensus 330 ~~Pe~Lp~~vt~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~~------------- 396 (903)
T PRK15122 330 LTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSGR------------- 396 (903)
T ss_pred HccchHHHHHHHHHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCCC-------------
Confidence 9999999999999999999999999999999999999999999999999999999999987632210
Q ss_pred CCccccCcceecCCCccCCCChHHHHHHHHHHhhccCCccccccccCceEEecChhHHHHHHHHHHcCCCCcccCCCchh
Q psy886 509 GSTYEPIGDVFLNGSKIKGADYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRR 588 (962)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~~~~ 588 (962)
..+. ++..+++|+. .. ...|||+|.|++.++.+.+...
T Consensus 397 --------------------~~~~---~l~~a~l~s~--~~--------~~~~~p~e~All~~a~~~~~~~--------- 434 (903)
T PRK15122 397 --------------------KDER---VLQLAWLNSF--HQ--------SGMKNLMDQAVVAFAEGNPEIV--------- 434 (903)
T ss_pred --------------------ChHH---HHHHHHHhCC--CC--------CCCCChHHHHHHHHHHHcCchh---------
Confidence 0111 2222333321 10 1158999999999998755310
Q ss_pred hHHHhhhhHHhhhceeeEeecCCCCCceEEEEEecCCCCCCCCCCCEEEEeCChHHHHhcccccccCCeeeeCCHHHHHH
Q psy886 589 EQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKFPLTATLKNR 668 (962)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~~~~~~l~~~~~~~ 668 (962)
....|+++.++||+|.||+|+++++..++ ++++++|||||.++++|++...++...+++++.+++
T Consensus 435 ---------~~~~~~~~~~~pF~s~~k~ms~v~~~~~~------~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~ 499 (903)
T PRK15122 435 ---------KPAGYRKVDELPFDFVRRRLSVVVEDAQG------QHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRER 499 (903)
T ss_pred ---------hhhcCceEEEeeeCCCcCEEEEEEEcCCC------cEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHH
Confidence 12457888999999999999999875321 568999999999999999887777778899999999
Q ss_pred HHHHHHHHhcccchhheeeEEeeeCCCCccccccccccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEE
Q psy886 669 ILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVI 748 (962)
Q Consensus 669 i~~~~~~~~~~~~glRvl~~A~~~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~Mi 748 (962)
+.+..++++ .+|+|++++|||+.+.++.... .....|+|++|+|+++|+||||||++++|++||++||+|+|+
T Consensus 500 i~~~~~~~a--~~G~rvlavA~k~~~~~~~~~~-----~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~mi 572 (903)
T PRK15122 500 LLALAEAYN--ADGFRVLLVATREIPGGESRAQ-----YSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVL 572 (903)
T ss_pred HHHHHHHHH--hCCCEEEEEEEeccCccccccc-----cccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEE
Confidence 999888885 8999999999998754321100 011347899999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHcCCCCC----------------------------------------------------CccccCCC
Q psy886 749 TGDNKATAEAICRRIGVFTE----------------------------------------------------EEDTTGKS 776 (962)
Q Consensus 749 TGD~~~TA~~IA~~~GI~~~----------------------------------------------------~~~~~g~~ 776 (962)
||||+.||.+||+++||..+ |+.++.++
T Consensus 573 TGD~~~tA~aIA~~lGI~~~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPA 652 (903)
T PRK15122 573 TGDNPIVTAKICREVGLEPGEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPA 652 (903)
T ss_pred CCCCHHHHHHHHHHcCCCCCCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHH
Confidence 99999999999999999521 11122234
Q ss_pred CCcCcEEEeccChhHHHHhhcccccccCChhHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhCCCccchhH
Q psy886 777 YSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAALGLPEALIKK 856 (962)
Q Consensus 777 l~~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~ai~~gR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~ 856 (962)
|++||||||||+|||+||+||||||+||||++|+++|++||++|+||+|++.|+++.|++++++++++.+++.++||+|+
T Consensus 653 Lk~ADVGIAmg~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~ 732 (903)
T PRK15122 653 LRDADVGISVDSGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAI 732 (903)
T ss_pred HHhCCEEEEeCcccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHH
Confidence 46999999999999999999999999999999999999999999999999999999999999999988888766899999
Q ss_pred H-H----hhCcccccccccCCCCcCccchh------HHHHH-HHHhhhHHhhhcCCCcEEEeccchhhhhccccccCCCC
Q psy886 857 I-S----TTNRGKKKKLSYNFLDISLLGPA------IHYQV-DLTGGPDQVYLSGLPDSIYYLPTTVFATHHMSCLGGGD 924 (962)
Q Consensus 857 q-L----~~d~~~a~al~~e~~~~~~m~~p------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (962)
| | +||. |+++|++|||++++|++| ++.+. +++|....++. ..+|+ .+++.+..
T Consensus 733 qil~~nli~D~-~~lal~~d~~~~~~m~~P~~~~~~~~~~~~~~~g~~~~~~~----~~~~~-----~~~~~~~~----- 797 (903)
T PRK15122 733 HLLLQNLMYDI-SQLSLPWDKMDKEFLRKPRKWDAKNIGRFMLWIGPTSSIFD----ITTFA-----LMWFVFAA----- 797 (903)
T ss_pred HHHHHHHHHHH-HHHhhcCCCCCHhhcCCCCCCChhhhHHHHHHHHHHHHHHH----HHHHH-----HHHHHhcc-----
Confidence 9 3 9995 999999999999999555 34333 33333222110 00011 01111100
Q ss_pred ccCCCccccccCccchhhHHHHHHHHHHHHHhhccCCC
Q psy886 925 EFKGLDCHIFHDPHPMTMALSVLVTIEMLNAMNRYGRH 962 (962)
Q Consensus 925 ~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~ 962 (962)
+.. .. ....+|+.|++++++|+||+||+|+++
T Consensus 798 ---~~~--~~-~~~~~t~~f~~l~~~q~~~~~~~R~~~ 829 (903)
T PRK15122 798 ---NSV--EM-QALFQSGWFIEGLLSQTLVVHMLRTQK 829 (903)
T ss_pred ---CcH--hh-hhhhHHHHHHHHHHHHHHHHHhhCcCC
Confidence 000 00 011347889999999999999999863
No 9
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=3.8e-106 Score=991.16 Aligned_cols=685 Identities=25% Similarity=0.385 Sum_probs=538.8
Q ss_pred HHHHhhhhhhccCccccCCCChhHHH---HHHHHHHHHHHHHHHHHhhhccccccccccchhHHHHHHHHHHHHHHHHHH
Q psy886 40 CRLRLRQIDFIPARVTSLSPSENVHI---ASTNFAVLFCLCPQVLALFEEHEDFNSTLTSFVEPFVILLILIANAIVGVW 116 (962)
Q Consensus 40 ~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 116 (962)
..+..+...||+|.+..+++...++. .+..+..++.+++.+++++ .+.|.++++++++++++.+++++
T Consensus 37 ~ev~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~---------~~~~~~~~iI~~iv~~~~~i~~~ 107 (867)
T TIGR01524 37 VEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYL---------TDDLEATVIIALMVLASGLLGFI 107 (867)
T ss_pred HHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHH---------HhhHHHHHHhhhHHHHHHHHHHH
Confidence 35778888999999987765433322 2333333333333333322 13578899999999999999999
Q ss_pred HHHHHHHHHHHHhccCCCeEEEEE------CCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeeccccc
Q psy886 117 QERNAESAIEALKEYEPEMGKVIR------GDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILT 190 (962)
Q Consensus 117 ~~~~~~~~l~~l~~~~~~~~~v~r------~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lT 190 (962)
+|+|+++++++|.++.+..++|+| ||+ +++|+++||+|||+|.|++||+|||||+|++| .++.||||+||
T Consensus 108 ~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~--~~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~g--~~l~VDES~LT 183 (867)
T TIGR01524 108 QESRAERAAYALKNMVKNTATVLRVINENGNGS--MDEVPIDALVPGDLIELAAGDIIPADARVISA--RDLFINQSALT 183 (867)
T ss_pred HHHHHHHHHHHHhhhccCeeEEEEecccCCCCe--EEEEEhhcCCCCCEEEECCCCEEcccEEEEec--CceEEEccccc
Confidence 999999999999999999999999 787 79999999999999999999999999999974 34568999999
Q ss_pred CCCcceeecCCCCCCcccccCCCccccccCccccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCC
Q psy886 191 GESVSVIKHTDAVPDPRAEKNGPQMCENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVP 270 (962)
Q Consensus 191 GEs~Pv~k~~g~~~~~~~~~~~~~~~~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~ 270 (962)
|||.||+|.+++...
T Consensus 184 GES~PV~K~~~~~~~----------------------------------------------------------------- 198 (867)
T TIGR01524 184 GESLPVEKFVEDKRA----------------------------------------------------------------- 198 (867)
T ss_pred CCCCcccccCCcccc-----------------------------------------------------------------
Confidence 999999987664110
Q ss_pred CCEEEeCCCCeecceEEEEeecCCeEEEEecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEec
Q psy886 271 GDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTG 350 (962)
Q Consensus 271 GDIV~l~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG 350 (962)
......+++|++|+||.+.+|+++++|++||
T Consensus 199 -------------------------------------------------~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG 229 (867)
T TIGR01524 199 -------------------------------------------------RDPEILERENLCFMGTNVLSGHAQAVVLATG 229 (867)
T ss_pred -------------------------------------------------ccccccccccceecCCeEEEeEEEEEEEEEc
Confidence 0001134569999999999999999999999
Q ss_pred cchhhHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHhhc
Q psy886 351 LNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVAAI 430 (962)
Q Consensus 351 ~~T~~gki~~~~~~~~~~~tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~i 430 (962)
.+|++|||.+++.+ +..++|+|++++++++++..+++++++++++++.. ...+|. ..+..++++++++|
T Consensus 230 ~~T~~gki~~~v~~-~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~------~~~~~~----~~~~~al~l~v~~i 298 (867)
T TIGR01524 230 SSTWFGSLAIAATE-RRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGL------MKGDWL----EAFLFALAVAVGLT 298 (867)
T ss_pred CccHHHHHHHHhhC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHH------hcCCHH----HHHHHHHHHHHHhC
Confidence 99999999999988 67789999999999999988887777766655421 112343 35778999999999
Q ss_pred CCchHHHHHHHHHHHHHHHhhhcCccCCchhhhhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcceEEEeCC
Q psy886 431 PEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGS 510 (962)
Q Consensus 431 P~~Lp~~v~i~l~~~~~~m~k~~ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~ 510 (962)
||+||++++++++.++++|+|+|++||+++++|+||++++||||||||||+|+|+|.+++..++
T Consensus 299 P~~Lp~~vt~~la~g~~~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~---------------- 362 (867)
T TIGR01524 299 PEMLPMIVSSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSG---------------- 362 (867)
T ss_pred cchHHHHHHHHHHHHHHHHHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCCC----------------
Confidence 9999999999999999999999999999999999999999999999999999999988752110
Q ss_pred ccccCcceecCCCccCCCChHHHHHHHHHHhhccCCccccccccCceEEecChhHHHHHHHHHHcCCCCcccCCCchhhH
Q psy886 511 TYEPIGDVFLNGSKIKGADYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQ 590 (962)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~~~~~~ 590 (962)
.+.+ +++..+++|+.. + ...+||+|.|++.++.+...
T Consensus 363 -----------------~~~~---~~l~~a~l~~~~--~--------~~~~~p~~~Al~~~~~~~~~------------- 399 (867)
T TIGR01524 363 -----------------ETSE---RVLKMAWLNSYF--Q--------TGWKNVLDHAVLAKLDESAA------------- 399 (867)
T ss_pred -----------------CCHH---HHHHHHHHhCCC--C--------CCCCChHHHHHHHHHHhhch-------------
Confidence 0011 223333343321 1 11469999999998865311
Q ss_pred HHhhhhHHhhhceeeEeecCCCCCceEEEEEecCCCCCCCCCCCEEEEeCChHHHHhcccccccCCeeeeCCHHHHHHHH
Q psy886 591 AIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKFPLTATLKNRIL 670 (962)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~~~~~~l~~~~~~~i~ 670 (962)
...+..|+++.++||||+||+|+++++..+. ..++++|||||.++++|+++..++...+++++.++++.
T Consensus 400 -----~~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~------~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~ 468 (867)
T TIGR01524 400 -----RQTASRWKKVDEIPFDFDRRRLSVVVENRAE------VTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQ 468 (867)
T ss_pred -----hhHhhcCceEEEeccCCCcCEEEEEEEcCCc------eEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHH
Confidence 0123467889999999999999999875321 46899999999999999998888888899998888999
Q ss_pred HHHHHHhcccchhheeeEEeeeCCCCccccccccccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEcC
Q psy886 671 DLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITG 750 (962)
Q Consensus 671 ~~~~~~~~~~~glRvl~~A~~~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTG 750 (962)
+..++++ ++|+|++++|||+++.++.+. ....|++|+|+|+++++||||+|++++|++||++||+|+|+||
T Consensus 469 ~~~~~~a--~~G~rvlavA~~~~~~~~~~~-------~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTG 539 (867)
T TIGR01524 469 DMTAEMN--RQGIRVIAVATKTLKVGEADF-------TKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTG 539 (867)
T ss_pred HHHHHHH--hcCCEEEEEEEeccCcccccc-------cccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcC
Confidence 8888885 899999999999876432211 0113689999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHcCCCCC----------------------------------------------------CccccCCCCC
Q psy886 751 DNKATAEAICRRIGVFTE----------------------------------------------------EEDTTGKSYS 778 (962)
Q Consensus 751 D~~~TA~~IA~~~GI~~~----------------------------------------------------~~~~~g~~l~ 778 (962)
||+.||.+||+++||..+ |+.++.++|+
T Consensus 540 D~~~tA~aIA~~lGI~~~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk 619 (867)
T TIGR01524 540 DNEIVTARICQEVGIDANDFLLGADIEELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALR 619 (867)
T ss_pred CCHHHHHHHHHHcCCCCCCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHH
Confidence 999999999999999621 1122334557
Q ss_pred cCcEEEeccChhHHHHhhcccccccCChhHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhCCCccchhHH-
Q psy886 779 KAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAALGLPEALIKKI- 857 (962)
Q Consensus 779 ~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~ai~~gR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~q- 857 (962)
+||||||||+|||+||+||||||+||||++|+++|++||++|+||||+++|+++.|+++++.++++.++..++||+|+|
T Consensus 620 ~AdVGIAmg~gtdvAk~aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qi 699 (867)
T TIGR01524 620 KADVGISVDTAADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHL 699 (867)
T ss_pred hCCEEEEeCCccHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999988887669999999
Q ss_pred H----hhCcccccccccCCCCcCccchh-------HHHHHHHHhhhHHhhhcCCCcEEEeccchhhhhccccccCCCCcc
Q psy886 858 S----TTNRGKKKKLSYNFLDISLLGPA-------IHYQVDLTGGPDQVYLSGLPDSIYYLPTTVFATHHMSCLGGGDEF 926 (962)
Q Consensus 858 L----~~d~~~a~al~~e~~~~~~m~~p-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (962)
| +|| +|++||++|||++++|++| +.+.++++|....++. ..+|+ .+++.+...
T Consensus 700 l~inl~~d-~~~~al~~~~~~~~~m~~p~~~~~~~~~~~~~~~g~~~~~~~----~~~~~-----~~~~~~~~~------ 763 (867)
T TIGR01524 700 LIQNLLYD-FSQLTLPWDKMDREFLKKPHQWEQKGMGRFMLCIGPVSSIFD----IATFL-----LMWFVFSAN------ 763 (867)
T ss_pred HHHHHHHH-HHHHhhcCCCCChHhhCCCCCCChhhHHHHHHHHHHHHHHHH----HHHHH-----HHHHHhccc------
Confidence 3 999 7999999999999999888 2334444454222110 00011 000011000
Q ss_pred CCCccccccCccchhhHHHHHHHHHHHHHhhccCCC
Q psy886 927 KGLDCHIFHDPHPMTMALSVLVTIEMLNAMNRYGRH 962 (962)
Q Consensus 927 ~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~ 962 (962)
+. .....-+|+.|++++++|++|+||+|+++
T Consensus 764 -~~----~~~~~~~t~~f~~~~~~~~~~~~~~R~~~ 794 (867)
T TIGR01524 764 -TV----EEQALFQSGWFVVGLLSQTLVVHMIRTEK 794 (867)
T ss_pred -ch----hhhhHHHHHHHHHHHHHHHHHHHhhCcCC
Confidence 00 00112258889999999999999999863
No 10
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=1.1e-105 Score=993.82 Aligned_cols=705 Identities=33% Similarity=0.509 Sum_probs=543.5
Q ss_pred HHHHhhhhhhccCccccCCCChhHHHH---H-HHHHHHHHHHHHHHHhhhccccccccccchhHHHHHHHHHHHHHHHHH
Q psy886 40 CRLRLRQIDFIPARVTSLSPSENVHIA---S-TNFAVLFCLCPQVLALFEEHEDFNSTLTSFVEPFVILLILIANAIVGV 115 (962)
Q Consensus 40 ~~~~~~~~~~g~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 115 (962)
+.+-.+...||.|.+..+++...++.. + ..+..++.+++.+++++. ..|.++++++++++++..++.
T Consensus 28 ~ev~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~---------g~~~~~~~i~~~i~~~~~i~~ 98 (884)
T TIGR01522 28 QEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFM---------GNIDDAVSITLAILIVVTVGF 98 (884)
T ss_pred HHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHH---------cchhhHHHHHhHHHHHHHHHH
Confidence 457778889999999877654333222 3 233333333333332221 246778888888888899999
Q ss_pred HHHHHHHHHHHHHhccCCCeEEEEECCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeecccccCCCcc
Q psy886 116 WQERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVS 195 (962)
Q Consensus 116 ~~~~~~~~~l~~l~~~~~~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lTGEs~P 195 (962)
++|+|+++++++|.++.|.+++|+|||+ +++|+++||+|||+|.|++||+|||||+|+
T Consensus 99 ~qe~~a~~~l~~L~~l~~~~~~ViRdg~--~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii-------------------- 156 (884)
T TIGR01522 99 VQEYRSEKSLEALNKLVPPECHLIREGK--LEHVLASTLVPGDLVCLSVGDRVPADLRIV-------------------- 156 (884)
T ss_pred HHHHHHHHHHHHHhccCCCeeEEEECCE--EEEEEHHHCccCCEEEecCCCEEeeeEEEE--------------------
Confidence 9999999999999999999999999887 555555555555555555555555555555
Q ss_pred eeecCCCCCCcccccCCCccccccCccccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEEE
Q psy886 196 VIKHTDAVPDPRAEKNGPQMCENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVE 275 (962)
Q Consensus 196 v~k~~g~~~~~~~~~~~~~~~~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~ 275 (962)
T Consensus 157 -------------------------------------------------------------------------------- 156 (884)
T TIGR01522 157 -------------------------------------------------------------------------------- 156 (884)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eCCCCeecceEEEEeecCCeEEEEecCCCCCCcceeccCCCCCCC-ccCCCCCcceEecCceeeeceEEEEEEEeccchh
Q psy886 276 VSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDP-RAVNQDKKNILFSGTNVAAGKARGIVMGTGLNTA 354 (962)
Q Consensus 276 l~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~pv~K~~~~~~~~-~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~T~ 354 (962)
+ +.++.||||+|||||.|+.|.++..++. .....+++|++|+||.|.+|+++++|++||.+|+
T Consensus 157 --------------~--g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~ 220 (884)
T TIGR01522 157 --------------E--AVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTE 220 (884)
T ss_pred --------------E--cCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccH
Confidence 3 2357799999999999999998653322 1234578899999999999999999999999999
Q ss_pred hHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHhhcCCch
Q psy886 355 IGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVAAIPEGL 434 (962)
Q Consensus 355 ~gki~~~~~~~~~~~tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~L 434 (962)
+|||++++++.+..+||+|+.++++++++..++++++++++++.+ + .+.+|. ..+..++++++++|||+|
T Consensus 221 ~gki~~~v~~~~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~--~----~~~~~~----~~~~~~v~llv~aiP~~L 290 (884)
T TIGR01522 221 FGAVFKMMQAIEKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVGW--F----QGKDWL----EMFTISVSLAVAAIPEGL 290 (884)
T ss_pred HHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH--H----hcCCHH----HHHHHHHHHHHHHccchH
Confidence 999999999888889999999999999988776655555444432 1 122343 357788999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhcCccCCchhhhhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcceEEEeCCcccc
Q psy886 435 PAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEP 514 (962)
Q Consensus 435 p~~v~i~l~~~~~~m~k~~ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 514 (962)
|++++++++.+++||+|+|+++|+++++|+||++|+||||||||||+|+|+|++++..++.+. ..++..+++
T Consensus 291 p~~vt~~l~~~~~r~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~--------~~~~~~~~~ 362 (884)
T TIGR01522 291 PIIVTVTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHT--------MLNAVSLNQ 362 (884)
T ss_pred HHHHHHHHHHHHHHHhhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEe--------eccCCccCC
Confidence 999999999999999999999999999999999999999999999999999999987553211 011111112
Q ss_pred CcceecCCCccCCCChHHHHHHHHHHhhccCCccccccccCceEEecChhHHHHHHHHHHcCCCCcccCCCchhhHHHhh
Q psy886 515 IGDVFLNGSKIKGADYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQAIAV 594 (962)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~l~~~~~~~~lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~ 594 (962)
.+....++........+.+.+++..+++||++...... ....|||+|.|++.++.+.|..
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~----~~~~g~p~e~All~~~~~~~~~---------------- 422 (884)
T TIGR01522 363 FGEVIVDGDVLHGFYTVAVSRILEAGNLCNNAKFRNEA----DTLLGNPTDVALIELLMKFGLD---------------- 422 (884)
T ss_pred CCcccccccccccccCHHHHHHHHHHhhhCCCeecCCC----CCcCCChHHHHHHHHHHHcCcH----------------
Confidence 11111111111111123456677788899988654321 1245999999999999876641
Q ss_pred hhHHhhhceeeEeecCCCCCceEEEEEecCCCCCCCCCCCEEEEeCChHHHHhccccccc-CCeeeeCCHHHHHHHHHHH
Q psy886 595 RQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARI-GSQKFPLTATLKNRILDLT 673 (962)
Q Consensus 595 ~~~~~~~~~~~~~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~-~~~~~~l~~~~~~~i~~~~ 673 (962)
..+..|+++.++||+|+||||+++++... ++++++|+|||||.|+++|+++.. ++...+++++.++++.+..
T Consensus 423 --~~~~~~~~~~~~pF~s~~k~m~v~~~~~~-----~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~ 495 (884)
T TIGR01522 423 --DLRETYIRVAEVPFSSERKWMAVKCVHRQ-----DRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEA 495 (884)
T ss_pred --hHHhhCcEEeEeCCCCCCCeEEEEEEEcC-----CCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHH
Confidence 12345788999999999999999887532 126789999999999999998754 4666788888899999888
Q ss_pred HHHhcccchhheeeEEeeeCCCCccccccccccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEcCCCH
Q psy886 674 RQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNK 753 (962)
Q Consensus 674 ~~~~~~~~glRvl~~A~~~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~ 753 (962)
++++ ++|+|++++||++. +.+|+|+|+++++||||||++++|++||++||+++|+||||+
T Consensus 496 ~~~a--~~G~rvl~~A~~~~------------------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~ 555 (884)
T TIGR01522 496 AEMA--SAGLRVIAFASGPE------------------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQ 555 (884)
T ss_pred HHHH--hcCCEEEEEEEEcC------------------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCH
Confidence 8885 89999999999864 368999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCc-c-----------------------------------------------------ccCCCCCc
Q psy886 754 ATAEAICRRIGVFTEEE-D-----------------------------------------------------TTGKSYSK 779 (962)
Q Consensus 754 ~TA~~IA~~~GI~~~~~-~-----------------------------------------------------~~g~~l~~ 779 (962)
+||.+||+++||..... . ++.+++++
T Consensus 556 ~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~ 635 (884)
T TIGR01522 556 ETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKL 635 (884)
T ss_pred HHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHHh
Confidence 99999999999974211 1 12223469
Q ss_pred CcEEEecc-ChhHHHHhhcccccccCChhHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhCCCccchhHH-
Q psy886 780 AEIGIAMG-SGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAALGLPEALIKKI- 857 (962)
Q Consensus 780 AdVGIAmg-~gtdvAkeaADivL~dd~f~~iv~ai~~gR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~q- 857 (962)
|||||||| +|+|+||++||+||+||||++|++++++||++|+||||++.|+++.|++++++++++.+++.|.||+|+|
T Consensus 636 AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qi 715 (884)
T TIGR01522 636 ADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATLMGFPNPLNAMQI 715 (884)
T ss_pred CCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhHHHH
Confidence 99999999 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred H----hhCcccccccccCCCCcCccchh-------H-----HHHHHHHhhhHHhhhcCCCcEEEeccchhhhhccccccC
Q psy886 858 S----TTNRGKKKKLSYNFLDISLLGPA-------I-----HYQVDLTGGPDQVYLSGLPDSIYYLPTTVFATHHMSCLG 921 (962)
Q Consensus 858 L----~~d~~~a~al~~e~~~~~~m~~p-------~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (962)
| ++|.+|+++|++|||++++|+|| + ++++++.|+...+.. .+.|+ +.+ +.
T Consensus 716 L~inl~~d~~~a~~l~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~~g~~~~~~~----~~~~~--------~~~-~~- 781 (884)
T TIGR01522 716 LWINILMDGPPAQSLGVEPVDKDVMRKPPRPRNDKILTKDLIKKILVSAIIIVVGT----LFVFV--------REM-QD- 781 (884)
T ss_pred HHHHHHHHhhHHHHhccCCCChhHhhCCCCCCCCCccCHHHHHHHHHHHHHHHHHH----HHHHH--------HHH-cC-
Confidence 3 99999999999999999999986 2 233333333211110 00011 000 00
Q ss_pred CCCccCCCccccccCccchhhHHHHHHHHHHHHHhhccCC
Q psy886 922 GGDEFKGLDCHIFHDPHPMTMALSVLVTIEMLNAMNRYGR 961 (962)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~ 961 (962)
+ .....++||+|++|+++|+||+||||++
T Consensus 782 ------~-----~~~~~~~t~~f~~~v~~q~~~~~~~r~~ 810 (884)
T TIGR01522 782 ------G-----VITARDTTMTFTCFVFFDMFNALACRSQ 810 (884)
T ss_pred ------C-----cchhhHHHHHHHHHHHHHHHHHHHHccC
Confidence 1 0123578999999999999999999985
No 11
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=6.5e-105 Score=992.66 Aligned_cols=721 Identities=29% Similarity=0.372 Sum_probs=537.1
Q ss_pred HHHHhhhhhhccCccccCCCChhHHHH-------HHHHHHHHHHHHHHHHhhhccccccccccchhHHHHHHHHHHHHHH
Q psy886 40 CRLRLRQIDFIPARVTSLSPSENVHIA-------STNFAVLFCLCPQVLALFEEHEDFNSTLTSFVEPFVILLILIANAI 112 (962)
Q Consensus 40 ~~~~~~~~~~g~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 112 (962)
..+..+...||+|.+..+++...++.. ...+++++++++++++.+............|.++++++++++++.+
T Consensus 64 ~ev~~r~~~yG~N~l~~~~~~s~~~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~il~~v~~~~~ 143 (941)
T TIGR01517 64 STLERREKVYGKNELPEKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVVL 143 (941)
T ss_pred HHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHHHHHHhH
Confidence 457788889999999887764433322 2233444444444443221100111233468889999988999999
Q ss_pred HHHHHHHHHHHHHHHHhcc-CCCeEEEEECCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeecccccC
Q psy886 113 VGVWQERNAESAIEALKEY-EPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTG 191 (962)
Q Consensus 113 ~~~~~~~~~~~~l~~l~~~-~~~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lTG 191 (962)
++.++++++++++++|.+. .+.+++|+|||+ +++|++++|+|||+|.|++||+|||||+|++|
T Consensus 144 i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~--~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g-------------- 207 (941)
T TIGR01517 144 VTAVNDYKKELQFRQLNREKSAQKIAVIRGGQ--EQQISIHDIVVGDIVSLSTGDVVPADGVFISG-------------- 207 (941)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCceEEEECCE--EEEEeHHHCCCCCEEEECCCCEecccEEEEEc--------------
Confidence 9999999999999999874 477999999988 67777777777777777777777777777742
Q ss_pred CCcceeecCCCCCCcccccCCCccccccCccccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCC
Q psy886 192 ESVSVIKHTDAVPDPRAEKNGPQMCENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPG 271 (962)
Q Consensus 192 Es~Pv~k~~g~~~~~~~~~~~~~~~~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~G 271 (962)
T Consensus 208 -------------------------------------------------------------------------------- 207 (941)
T TIGR01517 208 -------------------------------------------------------------------------------- 207 (941)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CEEEeCCCCeecceEEEEeecCCeEEEEecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEecc
Q psy886 272 DIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGL 351 (962)
Q Consensus 272 DIV~l~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~ 351 (962)
.++.||||+|||||.|+.|.++ ..|++|+||.+.+|+++++|++||+
T Consensus 208 ----------------------~~l~VdES~LTGES~pv~K~~~-----------~~n~v~~GT~v~~G~~~~iV~~tG~ 254 (941)
T TIGR01517 208 ----------------------LSLEIDESSITGESDPIKKGAP-----------KDSFLLSGTVVNEGSGRMLVTAVGV 254 (941)
T ss_pred ----------------------CcEEEEecccCCCCCcccccCC-----------CCceEEeCCeEEeeEEEEEEEEeCC
Confidence 2445666666666666666532 2379999999999999999999999
Q ss_pred chhhHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-cCCCCCC-----cchHHHHHHHHHHHHH
Q psy886 352 NTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHF-NDPAHGG-----SWIKGAVYYFKIAVAL 425 (962)
Q Consensus 352 ~T~~gki~~~~~~~~~~~tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~~~-~~~~~~~-----~~~~~~~~~~~~~i~l 425 (962)
+|++|||++++..++ +++|+|++++++++++..++++++++++++++..+ ....... .....+...+..++++
T Consensus 255 ~T~~gki~~~~~~~~-~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~l 333 (941)
T TIGR01517 255 NSFGGKLMMELRAEG-EDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTI 333 (941)
T ss_pred CcHHHHHHHhhccCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHH
Confidence 999999999988765 57899999999999998877776666655442111 0000000 0112334568889999
Q ss_pred HHhhcCCchHHHHHHHHHHHHHHHhhhcCccCCchhhhhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcceE
Q psy886 426 AVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEF 505 (962)
Q Consensus 426 ~v~~iP~~Lp~~v~i~l~~~~~~m~k~~ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~ 505 (962)
++++|||+||++++++++.++++|+|+|+++|+++++|+||++++||||||||||+|+|+|++++..+..++.+.
T Consensus 334 lv~~iP~~Lp~~vti~l~~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~----- 408 (941)
T TIGR01517 334 VVVAVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRD----- 408 (941)
T ss_pred HHhhCCCchHHHHHHHHHHHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCc-----
Confidence 999999999999999999999999999999999999999999999999999999999999999987543221100
Q ss_pred EEeCCccccCcceecCCCccCCCChHHHHHHHHHHhhccCCccccccccCceEEecChhHHHHHHHHHHcCCCCcccCCC
Q psy886 506 EITGSTYEPIGDVFLNGSKIKGADYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGL 585 (962)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~ 585 (962)
. . ... .+...+++..++.||+.........+.++..|||+|.|++.++.+.+....
T Consensus 409 ------------~-~-----~~~-~~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~----- 464 (941)
T TIGR01517 409 ------------V-L-----RNV-PKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLGFLLLLGRDYQ----- 464 (941)
T ss_pred ------------c-c-----ccC-CHHHHHHHHHHHHhCCCCccccCCCCccccCCCccHHHHHHHHHHcCCCHH-----
Confidence 0 0 000 123444555556666543321111123456799999999999987664110
Q ss_pred chhhHHHhhhhHHhhhceeeEeecCCCCCceEEEEEecCCCCCCCCCCCEEEEeCChHHHHhcccccc-cCCeeeeCCHH
Q psy886 586 GRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHAR-IGSQKFPLTAT 664 (962)
Q Consensus 586 ~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~-~~~~~~~l~~~ 664 (962)
..+..|+++.++||+|+||+|+++++..+ +++++|+|||||.++++|+++. .++...++++
T Consensus 465 -----------~~~~~~~~~~~~pF~s~~k~msvv~~~~~------~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~- 526 (941)
T TIGR01517 465 -----------EVRAEEKVVKIYPFNSERKFMSVVVKHSG------GKVREFRKGASEIVLKPCRKRLDSNGEATPISD- 526 (941)
T ss_pred -----------HHHhhchhccccccCCCCCeEEEEEEeCC------CcEEEEEECChHHHHHhhhHHhhcCCCcccCcH-
Confidence 12345677889999999999999988542 1578999999999999998754 3556667776
Q ss_pred HHHHHHHHHHHHhcccchhheeeEEeeeCCCCccccccccccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCE
Q psy886 665 LKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIR 744 (962)
Q Consensus 665 ~~~~i~~~~~~~~~~~~glRvl~~A~~~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~ 744 (962)
.++++.+..++++ ++|+|++++||++.+.++.. ..+..|+||+|+|+++++||||+|++++|++||+|||+
T Consensus 527 ~~~~i~~~~~~~a--~~G~Rvl~~A~~~~~~~~~~-------~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~ 597 (941)
T TIGR01517 527 DKDRCADVIEPLA--SDALRTICLAYRDFAPEEFP-------RKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGIT 597 (941)
T ss_pred HHHHHHHHHHHHH--hcCCEEEEEEEEecCccccc-------cccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCE
Confidence 6788888888886 89999999999987543211 11234789999999999999999999999999999999
Q ss_pred EEEEcCCCHHHHHHHHHHcCCCCCC-cc----------------------------------------------------
Q psy886 745 VIVITGDNKATAEAICRRIGVFTEE-ED---------------------------------------------------- 771 (962)
Q Consensus 745 v~MiTGD~~~TA~~IA~~~GI~~~~-~~---------------------------------------------------- 771 (962)
|+|+||||+.||.+||++|||.+++ ..
T Consensus 598 v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDG 677 (941)
T TIGR01517 598 VRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDG 677 (941)
T ss_pred EEEECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCC
Confidence 9999999999999999999997422 11
Q ss_pred -ccCCCCCcCcEEEecc-ChhHHHHhhcccccccCChhHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhCC
Q psy886 772 -TTGKSYSKAEIGIAMG-SGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAALGL 849 (962)
Q Consensus 772 -~~g~~l~~AdVGIAmg-~gtdvAkeaADivL~dd~f~~iv~ai~~gR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~ 849 (962)
++.++|++|||||||| +|||+||+|||+||+||||++|+++|++||++|+||+|++.|.+++|+.++++.+++.+++.
T Consensus 678 vNDapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~ 757 (941)
T TIGR01517 678 TNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISS 757 (941)
T ss_pred CchHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2223446999999999 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccchhHH-H----hhCcccccccccCCCCcCccchh-------H----HHH-HHHHhhhHHhhhcCCCcEEEeccchhh
Q psy886 850 PEALIKKI-S----TTNRGKKKKLSYNFLDISLLGPA-------I----HYQ-VDLTGGPDQVYLSGLPDSIYYLPTTVF 912 (962)
Q Consensus 850 ~~pl~~~q-L----~~d~~~a~al~~e~~~~~~m~~p-------~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (962)
|.||+|+| | ++|.+|+++|++|||++++|+|| + +++ +++.|....+.. ...|++ .+
T Consensus 758 ~~pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~----~~~~~~---~~ 830 (941)
T TIGR01517 758 TSPLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGRNAPLISRSMWKNILGQAGYQLVVT----FILLFA---GG 830 (941)
T ss_pred cccHHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCCCCCCCcCCHHHHHHHHHHHHHHHHHH----HHHHHH---HH
Confidence 99999999 3 99999999999999999999877 2 233 333333211100 000000 00
Q ss_pred hhccccccCCCCccCCCccccccCccchhhHHHHHHHHHHHHHhhccCC
Q psy886 913 ATHHMSCLGGGDEFKGLDCHIFHDPHPMTMALSVLVTIEMLNAMNRYGR 961 (962)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~ 961 (962)
++++... +..|......+++|++|++|+++|+||+||+|+.
T Consensus 831 --~~~~~~~------~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~ 871 (941)
T TIGR01517 831 --SIFDVSG------PDEITSHQQGELNTIVFNTFVLLQLFNEINARKL 871 (941)
T ss_pred --hhhcccC------cccccccccchhhHHHHHHHHHHHHHHHHHHccC
Confidence 0010000 0001111234678999999999999999999985
No 12
>KOG0203|consensus
Probab=100.00 E-value=3.5e-104 Score=886.81 Aligned_cols=607 Identities=33% Similarity=0.543 Sum_probs=513.5
Q ss_pred HHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEEEeCCCCeecceEEEEeecCCeEEEEecCCCCCCcc
Q psy886 230 QLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVS 309 (962)
Q Consensus 230 ~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~p 309 (962)
..|.+..+.++++++|+|..|+|+|||+ .+.+.+++||+||+|.++-||+||||.|+++ +..+++|+|+|||||+|
T Consensus 145 ~qe~ks~~im~sF~~l~P~~~~ViRdg~--k~~i~~eelVvGD~v~vk~GdrVPADiRiis--~~g~~vdnsslTGesEP 220 (1019)
T KOG0203|consen 145 YQEAKSSKIMDSFKNLVPQQALVIRDGE--KMTINAEELVVGDLVEVKGGDRVPADIRIIS--ATGCKVDNSSLTGESEP 220 (1019)
T ss_pred ccchhhHHHHHHHhccchhhheeeecce--eEEechhhcccccceeeccCCcccceeEEEE--ecceeEeccccccccCC
Confidence 4678899999999999999999999998 6899999999999999999999999999997 56899999999999999
Q ss_pred eeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEeccchhhHHHHhhccccccCCCchHHHHHHHHHHHHHHHHH
Q psy886 310 VIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISI 389 (962)
Q Consensus 310 v~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~T~~gki~~~~~~~~~~~tplq~~l~~~~~~l~~~~~~ 389 (962)
..+.+...... ..+..|+.|.+|.+.+|.++++|++||.+|.+|+|+.+....+..++|++++++++..++..+++.
T Consensus 221 ~~~~~~~t~~~---~~Et~Ni~f~st~~veG~~~givi~tGd~Tv~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~ 297 (1019)
T KOG0203|consen 221 QTRSPEFTHEN---PLETRNIAFFSTNCVEGTGRGIVIATGDRTVMGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIF 297 (1019)
T ss_pred ccCCccccccC---chhheeeeeeeeEEecceEEEEEEecCCceEEeehhhhhccCCCCCCcchhhhhchHHHHHHHHHH
Confidence 99988654332 278899999999999999999999999999999999999888899999999999999999988888
Q ss_pred HHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhhhcCccCCchhhhhcCCee
Q psy886 390 ICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTS 469 (962)
Q Consensus 390 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~Lp~~v~i~l~~~~~~m~k~~ilvr~~~~~E~LG~v~ 469 (962)
+.+.+|++.... +..|+.. +...+.++++.+|+|||+++|.++..-++||+++++++|++.++|+||+.+
T Consensus 298 ~~i~fF~~~~~~------gy~~l~a----vv~~i~iivAnvPeGL~~tvTv~LtltakrMa~Knc~vknLeavetlGsts 367 (1019)
T KOG0203|consen 298 LGISFFILALIL------GYEWLRA----VVFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTS 367 (1019)
T ss_pred HHHHHHHHHHhh------cchhHHH----hhhhheeEEecCcCCccceehhhHHHHHHHHhhceeEEeeeeheeecccce
Confidence 888777665421 3455543 344788899999999999999999999999999999999999999999999
Q ss_pred EEEecCCCcccCCceEEEEEEEeccccCCCCCcceEEEeCCccccCcceecCCCccCCCChHHHHHHHHHHhhccCCccc
Q psy886 470 VICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKIKGADYETLHELGTICIMCNDSAID 549 (962)
Q Consensus 470 ~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lcn~~~~~ 549 (962)
+||+|||||||+|+|+|.++|.++.+...+.. .+..+.. . .........+.+++.+||.+...
T Consensus 368 ~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~---~~~~~~~-------------~-~~~~~~~~~l~r~~~lCn~a~~~ 430 (1019)
T KOG0203|consen 368 TICSDKTGTLTQNRMTVAHLWFDNQIHEADTT---EDQSGQS-------------F-DKSSATFIALSRIATLCNRAVFK 430 (1019)
T ss_pred eEeecceeeEEecceEEEeeccCCceeeeech---hhhhccc-------------c-cccCchHHHHHHHHHHhCcceec
Confidence 99999999999999999999998765332211 0000000 0 01134567788899999999875
Q ss_pred ccccc---CceEEecChhHHHHHHHHHHcCCCCcccCCCchhhHHHhhhhHHhhhceeeEeecCCCCCceEEEEEecCCC
Q psy886 550 FNEFK---QAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKS 626 (962)
Q Consensus 550 ~~~~~---~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvv~~~~~~ 626 (962)
..+.. -.....||+.|.||++++...-.. ....++.++.+.++||+|.+|+.-.+++..+.
T Consensus 431 ~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~----------------~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~ 494 (1019)
T KOG0203|consen 431 PGQDDVPVLKRDVAGDASEVALLKFIELILGS----------------VMELRERNPKVAEIPFNSTNKYQLSIHETEDP 494 (1019)
T ss_pred ccccCCceeeeeccCCHHHHHHHHHHHHhcch----------------HHHHHHhhHHhhcCCcccccceEEEEEecCCC
Confidence 43321 123457999999999999764321 01256778889999999999998888876543
Q ss_pred CCCCCCCCEEEEeCChHHHHhcccccccCCeeeeCCHHHHHHHHHHHHHHhcccchhheeeEEeeeCCCCccccccc-cc
Q psy886 627 SKLGSSGPKLFVKGAPEGVLERCTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLA-DS 705 (962)
Q Consensus 627 ~~~~~~~~~~~~KGA~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~glRvl~~A~~~~~~~~~~~~~~-~~ 705 (962)
.+.+..+.+|||||.++++|+.+.+.++..|+++..++.+...+.+++ ..|-||++||++.++.++...... +.
T Consensus 495 ---~~~~~~l~mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg--~~GerVlgF~~~~l~~~~~p~~~~f~~ 569 (1019)
T KOG0203|consen 495 ---SDPRFLLVMKGAPERILDRCSTILINGEEKPLDEKLKEAFQEAYLELG--GLGERVLGFCDLELPDEKFPRGFQFDT 569 (1019)
T ss_pred ---CCccceeeecCChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhh--hcchHHHHHHHHhcchhcCCCceEeec
Confidence 233678899999999999999999999999999999999999999986 899999999998877542211100 00
Q ss_pred cccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCcc--------------
Q psy886 706 TKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEED-------------- 771 (962)
Q Consensus 706 ~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~~~~-------------- 771 (962)
.....--.++.|+|++++.||||..+|+||.+||.|||||+|+||||+.||++||++.||+.+...
T Consensus 570 d~~n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~ 649 (1019)
T KOG0203|consen 570 DDVNFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVE 649 (1019)
T ss_pred CCCCCcchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCccc
Confidence 011112368999999999999999999999999999999999999999999999999998753210
Q ss_pred -----------ccCCCC-------------------------------------------------------CcCcEEEe
Q psy886 772 -----------TTGKSY-------------------------------------------------------SKAEIGIA 785 (962)
Q Consensus 772 -----------~~g~~l-------------------------------------------------------~~AdVGIA 785 (962)
+.|.++ ++||||||
T Consensus 650 ~vn~~~a~a~VihG~eL~~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVA 729 (1019)
T KOG0203|consen 650 QVNSRDAKAAVIHGSELPDMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVA 729 (1019)
T ss_pred ccCccccceEEEecccccccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhccccccee
Confidence 223332 49999999
Q ss_pred cc-ChhHHHHhhcccccccCChhHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhCCCccchhHH-H----h
Q psy886 786 MG-SGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAALGLPEALIKKI-S----T 859 (962)
Q Consensus 786 mg-~gtdvAkeaADivL~dd~f~~iv~ai~~gR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~q-L----~ 859 (962)
|| +||||+|+||||||+||||+|||..|+|||-+|+|+||.|.|.|++|++|+.+++++.++|+|+||.+++ | .
T Consensus 730 MGiaGSDvsKqAADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL~IDLg 809 (1019)
T KOG0203|consen 730 MGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTILCIDLG 809 (1019)
T ss_pred eccccchHHHhhcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhhhhHhh
Confidence 99 9999999999999999999999999999999999999999999999999999999999999999999999 4 9
Q ss_pred hCcccccccccCCCCcCccchh--------------HHHHHHHHhh
Q psy886 860 TNRGKKKKLSYNFLDISLLGPA--------------IHYQVDLTGG 891 (962)
Q Consensus 860 ~d~~~a~al~~e~~~~~~m~~p--------------~~~~~~~~~~ 891 (962)
||..||++||||+||.|||+|| +.+.|+.+|.
T Consensus 810 TDmvPAiSLAYE~aEsDIM~r~PR~p~~D~LVN~rLi~~aY~qIG~ 855 (1019)
T KOG0203|consen 810 TDIVPAISLAYEKAESDIMLRPPRNPKDDKLVNKRLISYSYLQIGM 855 (1019)
T ss_pred cccchhhhHhccCchhhHHhcCCCCCcccccccchhHHHHHHHHHH
Confidence 9999999999999999999887 4778888887
No 13
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=1.1e-99 Score=922.78 Aligned_cols=647 Identities=27% Similarity=0.385 Sum_probs=501.3
Q ss_pred HHHhhhhhhccCccccCCCChhHHHH--HHH----HHHHHHHHHHHHHhhhccccccccccchhHHHHHHHHHHHHHHHH
Q psy886 41 RLRLRQIDFIPARVTSLSPSENVHIA--STN----FAVLFCLCPQVLALFEEHEDFNSTLTSFVEPFVILLILIANAIVG 114 (962)
Q Consensus 41 ~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 114 (962)
.+-.+...||+|.+..+.+..+.+.. +.. ++++++++++++ ..|.++++++++++++..++
T Consensus 6 ea~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~-------------~~~~~~~~i~~~~~i~~~i~ 72 (755)
T TIGR01647 6 EAKKRLAKYGPNELPEKKVSPLLKFLGFFWNPLSWVMEAAAIIAIAL-------------ENWVDFVIILGLLLLNATIG 72 (755)
T ss_pred HHHHHHHhcCCCCCCCCCCCHHHHHHHHHhchHHHHHHHHHHHHHhh-------------cchhhhhhhhhhhHHHHHHH
Confidence 35667888999999776554432222 222 222233333222 24778889999999999999
Q ss_pred HHHHHHHHHHHHHHhccCCCeEEEEECCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeecccccCCCc
Q psy886 115 VWQERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESV 194 (962)
Q Consensus 115 ~~~~~~~~~~l~~l~~~~~~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lTGEs~ 194 (962)
+++|+|+++++++|.++.+.+++|+|||+ +++||++||+|||+|.|++||+|||||+|++|.
T Consensus 73 ~~qe~~a~~~~~~L~~~~~~~~~V~Rdg~--~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~---------------- 134 (755)
T TIGR01647 73 FIEENKAGNAVEALKQSLAPKARVLRDGK--WQEIPASELVPGDVVRLKIGDIVPADCRLFEGD---------------- 134 (755)
T ss_pred HHHHHHHHHHHHHHHhhCCCeEEEEECCE--EEEEEhhhCcCCCEEEECCCCEEeceEEEEecC----------------
Confidence 99999999999999999999999999998 677888777777777777777777777777532
Q ss_pred ceeecCCCCCCcccccCCCccccccCccccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEE
Q psy886 195 SVIKHTDAVPDPRAEKNGPQMCENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIV 274 (962)
Q Consensus 195 Pv~k~~g~~~~~~~~~~~~~~~~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV 274 (962)
T Consensus 135 -------------------------------------------------------------------------------- 134 (755)
T TIGR01647 135 -------------------------------------------------------------------------------- 134 (755)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EeCCCCeecceEEEEeecCCeEEEEecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEeccchh
Q psy886 275 EVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLNTA 354 (962)
Q Consensus 275 ~l~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~T~ 354 (962)
++.||||+|||||.|+.|.++ |++|+||.+.+|+++++|++||++|+
T Consensus 135 --------------------~~~VDeS~LTGES~PV~K~~~-------------~~v~aGT~v~~G~~~~~V~~tG~~T~ 181 (755)
T TIGR01647 135 --------------------YIQVDQAALTGESLPVTKKTG-------------DIAYSGSTVKQGEAEAVVTATGMNTF 181 (755)
T ss_pred --------------------ceEEEcccccCCccceEeccC-------------CeeeccCEEEccEEEEEEEEcCCccH
Confidence 245666666666666666542 78999999999999999999999999
Q ss_pred hHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHhhcCCch
Q psy886 355 IGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVAAIPEGL 434 (962)
Q Consensus 355 ~gki~~~~~~~~~~~tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~L 434 (962)
+|||++++++++..++|+|+.++++++++.+++++++++++++++... +.+|. ..+..++++++++|||+|
T Consensus 182 ~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~-----~~~~~----~~~~~~i~vlv~a~P~~L 252 (755)
T TIGR01647 182 FGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGR-----GESFR----EGLQFALVLLVGGIPIAM 252 (755)
T ss_pred HHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----CCCHH----HHHHHHHHHHHHhCCcch
Confidence 999999999888889999999999999999888888877776654211 22333 357789999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhcCccCCchhhhhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcceEEEeCCcccc
Q psy886 435 PAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEP 514 (962)
Q Consensus 435 p~~v~i~l~~~~~~m~k~~ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 514 (962)
|++++++++.++++|+|+|+++|+++++|+||++|+||||||||||+|+|+|.+++..+..
T Consensus 253 p~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~------------------- 313 (755)
T TIGR01647 253 PAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNG------------------- 313 (755)
T ss_pred HHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEecCCC-------------------
Confidence 9999999999999999999999999999999999999999999999999999998764310
Q ss_pred CcceecCCCccCCCChHHHHHHHHHHhhccCCccccccccCceEEecChhHHHHHHHHHHcCCCCcccCCCchhhHHHhh
Q psy886 515 IGDVFLNGSKIKGADYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQAIAV 594 (962)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~l~~~~~~~~lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~ 594 (962)
.+.+ +++..+++|++. ..+||+|.|++.++.+.+.
T Consensus 314 -------------~~~~---~~l~~a~~~~~~------------~~~~pi~~Ai~~~~~~~~~----------------- 348 (755)
T TIGR01647 314 -------------FDKD---DVLLYAALASRE------------EDQDAIDTAVLGSAKDLKE----------------- 348 (755)
T ss_pred -------------CCHH---HHHHHHHHhCCC------------CCCChHHHHHHHHHHHhHH-----------------
Confidence 0011 233444555421 1479999999998765321
Q ss_pred hhHHhhhceeeEeecCCCCCceEEEEEecCCCCCCCCCCCEEEEeCChHHHHhcccccccCCeeeeCCHHHHHHHHHHHH
Q psy886 595 RQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKFPLTATLKNRILDLTR 674 (962)
Q Consensus 595 ~~~~~~~~~~~~~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~ 674 (962)
....|++...+||+|.+|+|+++++..+. ++.++++|||||.++++|++. .+.++++.+..+
T Consensus 349 ---~~~~~~~~~~~pf~~~~k~~~~~v~~~~~-----g~~~~~~kGa~e~il~~c~~~----------~~~~~~~~~~~~ 410 (755)
T TIGR01647 349 ---ARDGYKVLEFVPFDPVDKRTEATVEDPET-----GKRFKVTKGAPQVILDLCDNK----------KEIEEKVEEKVD 410 (755)
T ss_pred ---HHhcCceEEEeccCCCCCeEEEEEEeCCC-----ceEEEEEeCChHHHHHhcCCc----------HHHHHHHHHHHH
Confidence 23457788899999999999998875321 145788999999999999742 345566777778
Q ss_pred HHhcccchhheeeEEeeeCCCCccccccccccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEcCCCHH
Q psy886 675 QYGTGRDTLRCLGLATADNPLKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKA 754 (962)
Q Consensus 675 ~~~~~~~glRvl~~A~~~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~ 754 (962)
+++ ++|+|++++||++. |++|+|+|+++++||||||++++|++||++||+|+|+||||+.
T Consensus 411 ~~~--~~G~rvl~vA~~~~------------------e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~ 470 (755)
T TIGR01647 411 ELA--SRGYRALGVARTDE------------------EGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLA 470 (755)
T ss_pred HHH--hCCCEEEEEEEEcC------------------CCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHH
Confidence 875 89999999999721 4789999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCC---------------------------------------------------------CccccCCCC
Q psy886 755 TAEAICRRIGVFTE---------------------------------------------------------EEDTTGKSY 777 (962)
Q Consensus 755 TA~~IA~~~GI~~~---------------------------------------------------------~~~~~g~~l 777 (962)
||.+||+++||... |+.++.++|
T Consensus 471 tA~~IA~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL 550 (755)
T TIGR01647 471 IAKETARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPAL 550 (755)
T ss_pred HHHHHHHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHH
Confidence 99999999999641 111223345
Q ss_pred CcCcEEEeccChhHHHHhhcccccccCChhHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhCCCccchhHH
Q psy886 778 SKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAALGLPEALIKKI 857 (962)
Q Consensus 778 ~~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~ai~~gR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~q 857 (962)
++||||||||+|||+||+||||||+||||++|+++|++||++|+|||||+.|.+++|++++++++++.++ ++.||+|+|
T Consensus 551 ~~AdVGIAm~~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~-~~~~l~~~~ 629 (755)
T TIGR01647 551 KKADVGIAVAGATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILI-LNFYFPPIM 629 (755)
T ss_pred HhCCeeEEecCCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHH-hCcchhHHH
Confidence 7999999999999999999999999999999999999999999999999999999999999888777653 345599999
Q ss_pred -H----hhCcccccccccCCCCcCccchh-------HHHHHHHHhhhHHhhhcCCCcEEEeccchhhhhccccccCCCCc
Q psy886 858 -S----TTNRGKKKKLSYNFLDISLLGPA-------IHYQVDLTGGPDQVYLSGLPDSIYYLPTTVFATHHMSCLGGGDE 925 (962)
Q Consensus 858 -L----~~d~~~a~al~~e~~~~~~m~~p-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (962)
| ++|. +++++++|++++. ++| ++.+.++.|...++.. ...|++ .+... +..+.
T Consensus 630 il~~~l~~d~-~~~~l~~~~~~~~--~~p~~~~~~~~~~~~~~~g~~~~~~~----~~~~~~-~~~~~--~~~~~----- 694 (755)
T TIGR01647 630 VVIIAILNDG-TIMTIAYDNVKPS--KLPQRWNLREVFTMSTVLGIYLVIST----FLLLAI-ALDTS--FFIDK----- 694 (755)
T ss_pred HHHHHHHHhH-hHhhccCCCCCCC--CCCCccchHHHHHHHHHHHHHHHHHH----HHHHHH-HHhcc--cchhc-----
Confidence 3 8885 7999999999986 555 2333444444222110 000100 00000 00000
Q ss_pred cCCCccccccCccchhhHHHHHHHHHHHHHhhccCCC
Q psy886 926 FKGLDCHIFHDPHPMTMALSVLVTIEMLNAMNRYGRH 962 (962)
Q Consensus 926 ~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~ 962 (962)
+ +. .....+++|++|+.+++.|+|++|++|+++
T Consensus 695 ~-~~---~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~ 727 (755)
T TIGR01647 695 F-GL---QLLHGNLQSLIYLQVSISGQATIFVTRTHG 727 (755)
T ss_pred c-cc---cccHhhhHHHHHHHHHHHHHHHHheeccCC
Confidence 0 00 012335789999999999999999999874
No 14
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=1.1e-93 Score=899.84 Aligned_cols=653 Identities=21% Similarity=0.246 Sum_probs=499.5
Q ss_pred HHHHhhhhhhccCccccCCCChhH--HHHHHHHHHHHHHHHHHHHhhhccccccccccchhHHHHHHHHHHHHHHHHHHH
Q psy886 40 CRLRLRQIDFIPARVTSLSPSENV--HIASTNFAVLFCLCPQVLALFEEHEDFNSTLTSFVEPFVILLILIANAIVGVWQ 117 (962)
Q Consensus 40 ~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 117 (962)
..+..+...||.|.+..+.+.... .....++.+++.++++++|+.. ++|.++++++++++++..+..++
T Consensus 143 ~e~~~r~~~yG~N~i~~~~~s~~~ll~~~~~~p~~i~~i~~~~l~~~~---------~~~~~~~~i~~i~~~~~~~~~~~ 213 (1054)
T TIGR01657 143 GDIAQRKAKYGKNEIEIPVPSFLELLKEEVLHPFYVFQVFSVILWLLD---------EYYYYSLCIVFMSSTSISLSVYQ 213 (1054)
T ss_pred HHHHHHHHhcCCCeeecCCCCHHHHHHHHHhchHHHHHHHHHHHHHhh---------hhHHHHHHHHHHHHHHHHHHHHH
Confidence 346677888999999877654333 2336667777777777777652 34778899999999999999999
Q ss_pred HHHHHHHHHHHhccCCCeEEEEECCCccEEEEeCCCCCCCCEEEEc--CCCccCCCceEEeeecceeeeecccccCCCcc
Q psy886 118 ERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVS--VGDKIPADIRLIKIYSTTIRIDQSILTGESVS 195 (962)
Q Consensus 118 ~~~~~~~l~~l~~~~~~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~--~G~~iP~Dg~v~~G~~~~~~vdes~lTGEs~P 195 (962)
++|+.++++++.. .+..++|+|||+ |++|+++||+|||+|.|+ +|++|||||+|++| ++.||||+|||||.|
T Consensus 214 ~~k~~~~L~~~~~-~~~~v~V~Rdg~--~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g---~~~VdES~LTGES~P 287 (1054)
T TIGR01657 214 IRKQMQRLRDMVH-KPQSVIVIRNGK--WVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSG---SCIVNESMLTGESVP 287 (1054)
T ss_pred HHHHHHHHHHhhc-CCeeEEEEECCE--EEEEEcccCCCCCEEEEecCCCCEecceEEEEeC---cEEEecccccCCccc
Confidence 9999999988766 477999999998 899999999999999999 99999999999976 466999999999999
Q ss_pred eeecCCCCCCcccccCCCccccccCccccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEEE
Q psy886 196 VIKHTDAVPDPRAEKNGPQMCENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVE 275 (962)
Q Consensus 196 v~k~~g~~~~~~~~~~~~~~~~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~ 275 (962)
+.|.+...+.. ||
T Consensus 288 v~K~~~~~~~~----------------------------------------------------------------~~--- 300 (1054)
T TIGR01657 288 VLKFPIPDNGD----------------------------------------------------------------DD--- 300 (1054)
T ss_pred eecccCCcccc----------------------------------------------------------------cc---
Confidence 99976521000 00
Q ss_pred eCCCCeecceEEEEeecCCeEEEEecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeee-------ceEEEEEEE
Q psy886 276 VSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAA-------GKARGIVMG 348 (962)
Q Consensus 276 l~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~-------G~~~~vV~~ 348 (962)
.. ++ ....+++|++|+||.|.+ |.++++|++
T Consensus 301 ------------------~~--~~----------------------~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~ 338 (1054)
T TIGR01657 301 ------------------ED--LF----------------------LYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVR 338 (1054)
T ss_pred ------------------cc--cc----------------------ccccccceEEEcCCEEEEEecCCCCCcEEEEEEe
Confidence 00 00 001245699999999985 789999999
Q ss_pred eccchhhHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHh
Q psy886 349 TGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVA 428 (962)
Q Consensus 349 tG~~T~~gki~~~~~~~~~~~tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~ 428 (962)
||.+|..|++.+++...+..++++++.+.++...+..++++.++++++... . .+.+| ...++.+++++++
T Consensus 339 TG~~T~~G~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~~~~~--~----~~~~~----~~~~l~~l~iiv~ 408 (1054)
T TIGR01657 339 TGFSTSKGQLVRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTIIELI--K----DGRPL----GKIILRSLDIITI 408 (1054)
T ss_pred CCccccchHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH--H----cCCcH----HHHHHHHHHHHHh
Confidence 999999999999998888889999999998887776555444333333221 1 12233 3467889999999
Q ss_pred hcCCchHHHHHHHHHHHHHHHhhhcCccCCchhhhhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcceEEEe
Q psy886 429 AIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEIT 508 (962)
Q Consensus 429 ~iP~~Lp~~v~i~l~~~~~~m~k~~ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~ 508 (962)
+|||+||++++++++++++||+|+|++||+++++|++|+++++|||||||||+|+|+|.+++..+.... . .
T Consensus 409 ~vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~----~-----~ 479 (1054)
T TIGR01657 409 VVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQE----F-----L 479 (1054)
T ss_pred hcCchHHHHHHHHHHHHHHHHHHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCccc----c-----c
Confidence 999999999999999999999999999999999999999999999999999999999999986542100 0 0
Q ss_pred CCccccCcceecCCCccCCCChHHHHHHHHHHhhccCCccccccccCceEEecChhHHHHHHHHHHcCCCCcccCCCchh
Q psy886 509 GSTYEPIGDVFLNGSKIKGADYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRR 588 (962)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~~~~ 588 (962)
.... + ........+..+++.||+.....+ ...|||+|.|+++++... ............
T Consensus 480 ~~~~--------~------~~~~~~~~~~~~~a~C~~~~~~~~------~~~Gdp~E~al~~~~~~~-~~~~~~~~~~~~ 538 (1054)
T TIGR01657 480 KIVT--------E------DSSLKPSITHKALATCHSLTKLEG------KLVGDPLDKKMFEATGWT-LEEDDESAEPTS 538 (1054)
T ss_pred cccc--------c------ccccCchHHHHHHHhCCeeEEECC------EEecCHHHHHHHHhCCCE-EECCCCcccccc
Confidence 0000 0 000112234556789998754321 467999999999876321 000000000000
Q ss_pred hH-HHhhhhHHhhhceeeEeecCCCCCceEEEEEecCCCCCCCCCCCEEEEeCChHHHHhcccccccCCeeeeCCHHHHH
Q psy886 589 EQ-AIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKFPLTATLKN 667 (962)
Q Consensus 589 ~~-~~~~~~~~~~~~~~~~~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~~~~~~l~~~~~~ 667 (962)
.. ... .......++++.++||+|+|||||++++..+. ++.++|+|||||.|+++|++.. .++
T Consensus 539 ~~~~i~-~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~-----~~~~~~~KGApE~Il~~c~~~~-----------~p~ 601 (1054)
T TIGR01657 539 ILAVVR-TDDPPQELSIIRRFQFSSALQRMSVIVSTNDE-----RSPDAFVKGAPETIQSLCSPET-----------VPS 601 (1054)
T ss_pred ccccee-ccCCCceEEEEEEEeecCCCCEEEEEEEEcCC-----CeEEEEEECCHHHHHHHcCCcC-----------CCh
Confidence 00 000 00012468899999999999999999986431 1567999999999999998521 134
Q ss_pred HHHHHHHHHhcccchhheeeEEeeeCCCCccccccccccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEE
Q psy886 668 RILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIV 747 (962)
Q Consensus 668 ~i~~~~~~~~~~~~glRvl~~A~~~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~M 747 (962)
.+.+..++|+ ++|+||||+|||+++....+ ......++++|+||+|+|+++|+||+||+++++|+.||+|||+|+|
T Consensus 602 ~~~~~~~~~a--~~G~RVLalA~k~l~~~~~~--~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~m 677 (1054)
T TIGR01657 602 DYQEVLKSYT--REGYRVLALAYKELPKLTLQ--KAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVM 677 (1054)
T ss_pred hHHHHHHHHH--hcCCEEEEEEEeecCccchh--hhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEE
Confidence 5666777785 89999999999988632111 0011224567999999999999999999999999999999999999
Q ss_pred EcCCCHHHHHHHHHHcCCCCCCc------------------------------------------------------ccc
Q psy886 748 ITGDNKATAEAICRRIGVFTEEE------------------------------------------------------DTT 773 (962)
Q Consensus 748 iTGD~~~TA~~IA~~~GI~~~~~------------------------------------------------------~~~ 773 (962)
+||||+.||.+||++|||++++. .++
T Consensus 678 iTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~it 757 (1054)
T TIGR01657 678 ITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMS 757 (1054)
T ss_pred ECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEE
Confidence 99999999999999999975431 112
Q ss_pred CCCC--------------------------------------------------------CcCcEEEeccChhHHHHhhc
Q psy886 774 GKSY--------------------------------------------------------SKAEIGIAMGSGTAVAKSAS 797 (962)
Q Consensus 774 g~~l--------------------------------------------------------~~AdVGIAmg~gtdvAkeaA 797 (962)
|+++ ++||||||||.+ |++ +||
T Consensus 758 G~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~~-das-~AA 835 (1054)
T TIGR01657 758 GKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEA-EAS-VAA 835 (1054)
T ss_pred cHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeeccc-cce-eec
Confidence 2111 499999999854 555 999
Q ss_pred ccccccCChhHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhCCCccchhHH-H----hhCcccccccccCC
Q psy886 798 EMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAALGLPEALIKKI-S----TTNRGKKKKLSYNF 872 (962)
Q Consensus 798 DivL~dd~f~~iv~ai~~gR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~q-L----~~d~~~a~al~~e~ 872 (962)
|++++||||++|+++|+|||+++.|+++.++|.+.+++.+.+.+++..+. +.||+++| | ++|.+++++|+.+|
T Consensus 836 ~f~l~~~~~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~l~~~Q~l~i~li~~~~~~l~l~~~~ 913 (1054)
T TIGR01657 836 PFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSILYLI--GSNLGDGQFLTIDLLLIFPVALLMSRNK 913 (1054)
T ss_pred ccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--cCcCccHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999987776655544 47899999 4 99999999999999
Q ss_pred CCcCccchh
Q psy886 873 LDISLLGPA 881 (962)
Q Consensus 873 ~~~~~m~~p 881 (962)
|++++|++|
T Consensus 914 p~~~l~~~~ 922 (1054)
T TIGR01657 914 PLKKLSKER 922 (1054)
T ss_pred chhhcCCCC
Confidence 999999876
No 15
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=7.6e-86 Score=831.65 Aligned_cols=707 Identities=20% Similarity=0.233 Sum_probs=497.8
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHhhhccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEE
Q psy886 60 SENVHIASTNFAVLFCLCPQVLALFEEHEDFNSTLTSFVEPFVILLILIANAIVGVWQERNAESAIEALKEYEPEMGKVI 139 (962)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~ 139 (962)
+..++.++..+..++.++..++......... .....+...++++++..+..+++.++++++.+.+ .++.++|+
T Consensus 18 p~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~-~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~d~~~------n~~~~~v~ 90 (1057)
T TIGR01652 18 PKNLFEQFKRFANLYFLVVALLQQVPILSPT-YRGTSIVPLAFVLIVTAIKEAIEDIRRRRRDKEV------NNRLTEVL 90 (1057)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHcCCCcCCC-CccHhHHhHHHHHHHHHHHHHHHHHHHHHhHHHH------hCcEEEEE
Confidence 3555666777777777777777766433222 1233344444444455556666666666665433 46799999
Q ss_pred EC-CCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeec--ceeeeecccccCCCcceeecCCCCCCcccccCCCccc
Q psy886 140 RG-DKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYS--TTIRIDQSILTGESVSVIKHTDAVPDPRAEKNGPQMC 216 (962)
Q Consensus 140 r~-~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~--~~~~vdes~lTGEs~Pv~k~~g~~~~~~~~~~~~~~~ 216 (962)
|+ |+ ++++++++|+|||+|.|++||+|||||+|++.+. +.++||||+|||||.|+.|.+...+.... ...
T Consensus 91 ~~~~~--~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~~~~~~---~~~-- 163 (1057)
T TIGR01652 91 EGHGQ--FVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEETQKML---DED-- 163 (1057)
T ss_pred CCCCc--EEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchhhhccC---Chh--
Confidence 97 66 8999999999999999999999999999998544 56899999999999999998653221100 000
Q ss_pred cccCccccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEEEeCCCCeecc-eEEEEeecCCe
Q psy886 217 ENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPA-DIRLIKIYSTT 295 (962)
Q Consensus 217 ~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPa-D~~ll~~~~~~ 295 (962)
.+.+. +.. |..++ |- |.-.. .|.
T Consensus 164 ------------------------~~~~~---~~~----------------------i~~~~----p~~~l~~F---~G~ 187 (1057)
T TIGR01652 164 ------------------------DIKNF---SGE----------------------IECEQ----PNASLYSF---QGN 187 (1057)
T ss_pred ------------------------hHhhc---eEE----------------------EEEcC----CCCcceEE---EEE
Confidence 00000 000 00000 00 00001 122
Q ss_pred EEEEecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeee-ceEEEEEEEeccchhhHHHHhhccccccCCCchHH
Q psy886 296 IRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAA-GKARGIVMGTGLNTAIGKIRTEMSETEEIKTPLQQ 374 (962)
Q Consensus 296 l~VdeS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~-G~~~~vV~~tG~~T~~gki~~~~~~~~~~~tplq~ 374 (962)
+.++.. + ..+.+.+|++|+||.+.+ |+++|+|+|||++|++ .++....+.++|++++
T Consensus 188 ~~~~~~----~---------------~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~---~~n~~~~~~k~s~le~ 245 (1057)
T TIGR01652 188 MTINGD----R---------------QYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKL---MRNATQAPSKRSRLEK 245 (1057)
T ss_pred EEECCC----C---------------cccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhh---hhcCCCCcccccHHHH
Confidence 222210 1 123456799999999998 9999999999999955 4556666788999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcc-----------hHHHHHHHHHHHHHHHhhcCCchHHHHHHHHH
Q psy886 375 KLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSW-----------IKGAVYYFKIAVALAVAAIPEGLPAVITTCLA 443 (962)
Q Consensus 375 ~l~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~~~~~~~~~~i~l~v~~iP~~Lp~~v~i~l~ 443 (962)
+++++..+++.+.+++|++.+++...+.... ....| ....+..|..++.+++.+||++||++++++++
T Consensus 246 ~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~-~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~~IPisL~v~l~l~~~ 324 (1057)
T TIGR01652 246 ELNFLIIILFCLLFVLCLISSVGAGIWNDAH-GKDLWYIRLDVSERNAAANGFFSFLTFLILFSSLIPISLYVSLELVKS 324 (1057)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHheeccc-CCCccceecCcccccchhHHHHHHHHHHHHHhhhcceeeeehHHHHHH
Confidence 9999999998888888877776543221100 01122 22344567889999999999999999999999
Q ss_pred HHH------HHHhhh----cCccCCchhhhhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcc-eEEEeCCc-
Q psy886 444 LGT------RRMAKK----NAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFL-EFEITGST- 511 (962)
Q Consensus 444 ~~~------~~m~k~----~ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~-~~~~~~~~- 511 (962)
+++ .+|.++ +++||+++++|+||+|++||||||||||+|+|+++++++++..|+...... ....+..+
T Consensus 325 ~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~~~~~~~~~~~~ 404 (1057)
T TIGR01652 325 VQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDAIRERLGS 404 (1057)
T ss_pred HHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcchHHHHhhhcccc
Confidence 999 788875 499999999999999999999999999999999999999887665321100 00000000
Q ss_pred cccCc-------c-ee------cCCCccCCCChHHHHHHHHHHhhccCCccccccc--cCceEEecChhHHHHHHHHHHc
Q psy886 512 YEPIG-------D-VF------LNGSKIKGADYETLHELGTICIMCNDSAIDFNEF--KQAFEKVGEATETALIVLAEKL 575 (962)
Q Consensus 512 ~~~~~-------~-~~------~~~~~~~~~~~~~l~~~~~~~~lcn~~~~~~~~~--~~~~~~~g~p~e~Al~~~a~~~ 575 (962)
+.+.. . .. .+.........+.+.+++.++++||++.+..++. ....+..|||+|.||+.+|+..
T Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~E~ALl~~a~~~ 484 (1057)
T TIGR01652 405 YVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPDEAALVKAARDV 484 (1057)
T ss_pred cccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEccCCcHHHHHHHHHHC
Confidence 00000 0 00 0000001112245678888999999987764111 1134557999999999999998
Q ss_pred CCCCcccCCCchhhHHHhhhhHHhhhceeeEeecCCCCCceEEEEEecCCCCCCCCCCCEEEEeCChHHHHhcccccccC
Q psy886 576 NPFNVSKSGLGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIG 655 (962)
Q Consensus 576 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~ 655 (962)
|+....+..-.. .......+....|+++.++||+|+|||||++++.+++ ++++|+|||||.|+++|+..
T Consensus 485 g~~~~~~~~~~~--~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~------~~~l~~KGA~e~il~~~~~~--- 553 (1057)
T TIGR01652 485 GFVFFERTPKSI--SLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDG------RIKLLCKGADTVIFKRLSSG--- 553 (1057)
T ss_pred CCEEEEecCCce--EEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCC------eEEEEEeCcHHHHHHHhhcc---
Confidence 875443221000 0000001123568999999999999999999986532 57899999999999999741
Q ss_pred CeeeeCCHHHHHHHHHHHHHHhcccchhheeeEEeeeCCCCcccccc----------cc-----ccccccccCCeEEEEE
Q psy886 656 SQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNL----------AD-----STKFASYEVNLTFVGV 720 (962)
Q Consensus 656 ~~~~~l~~~~~~~i~~~~~~~~~~~~glRvl~~A~~~~~~~~~~~~~----------~~-----~~~~~~~e~~l~~lGl 720 (962)
+++.++++.+..++++ .+|+|||++|||.++.++..... .+ ....+.+|+||+|+|+
T Consensus 554 ------~~~~~~~~~~~~~~~a--~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~ 625 (1057)
T TIGR01652 554 ------GNQVNEETKEHLENYA--SEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGA 625 (1057)
T ss_pred ------chhHHHHHHHHHHHHH--HcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEE
Confidence 2345677888888886 89999999999998653211000 00 1113457899999999
Q ss_pred ecccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCc------------------------------
Q psy886 721 VGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEE------------------------------ 770 (962)
Q Consensus 721 ~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~~~------------------------------ 770 (962)
++++||||+||+++|+.||+|||||||+||||++||++||++|||++.+.
T Consensus 626 ~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~ 705 (1057)
T TIGR01652 626 TAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEE 705 (1057)
T ss_pred EEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999986532
Q ss_pred ------------cccCCCC------------------------------------------------------------C
Q psy886 771 ------------DTTGKSY------------------------------------------------------------S 778 (962)
Q Consensus 771 ------------~~~g~~l------------------------------------------------------------~ 778 (962)
.++|+++ +
T Consensus 706 ~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk 785 (1057)
T TIGR01652 706 FNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQ 785 (1057)
T ss_pred hhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHh
Confidence 1233321 3
Q ss_pred cCcEEEeccChhH--HHHhhcccccccCChhHHHHHH-HHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhCCC---cc
Q psy886 779 KAEIGIAMGSGTA--VAKSASEMVLADDNFSSIVAAV-EEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAALGLP---EA 852 (962)
Q Consensus 779 ~AdVGIAmg~gtd--vAkeaADivL~dd~f~~iv~ai-~~gR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~---~p 852 (962)
+|||||++ +|+| .|++|||++|.+ |+.|.+++ .+||.+|+|+++++.|.++.|+..+++.+++.++... .|
T Consensus 786 ~AdVGIgi-~g~eg~qA~~aaD~~i~~--F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~~~~ 862 (1057)
T TIGR01652 786 EADVGVGI-SGKEGMQAVMASDFAIGQ--FRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTL 862 (1057)
T ss_pred hcCeeeEe-cChHHHHHHHhhhhhhhh--HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHH
Confidence 89999965 4555 688999999975 99999998 7799999999999999999999999999988876432 35
Q ss_pred chhHH-H----hhCccccccccc--CCCCcCccchh
Q psy886 853 LIKKI-S----TTNRGKKKKLSY--NFLDISLLGPA 881 (962)
Q Consensus 853 l~~~q-L----~~d~~~a~al~~--e~~~~~~m~~p 881 (962)
+.+.| + +++.+|++++|. +++++++|.++
T Consensus 863 ~~~~~l~~~n~~~t~lp~~~l~~~d~~~~~~~l~~~ 898 (1057)
T TIGR01652 863 YEGWYMVLYNVFFTALPVISLGVFDQDVSASLSLRY 898 (1057)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhC
Confidence 67766 2 999999999986 56667777554
No 16
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=2.9e-85 Score=768.70 Aligned_cols=527 Identities=22% Similarity=0.289 Sum_probs=408.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccccc--ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC-eEE-EEEC
Q psy886 66 ASTNFAVLFCLCPQVLALFEEHEDFN--STLTSFVEPFVILLILIANAIVGVWQERNAESAIEALKEYEPE-MGK-VIRG 141 (962)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~-~~~-v~r~ 141 (962)
....+++++++++++++.|....... ..+..+...+++++.++++.+.+.++|+|+++++++|+++.|+ +++ |.||
T Consensus 33 p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~~v~rd 112 (673)
T PRK14010 33 PIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKARRIKQD 112 (673)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEEeC
Confidence 35566667777777666553210000 1112333444555556667777777799999999999999986 786 6789
Q ss_pred CCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeecccccCCCcceeecCCCCCCcccccCCCccccccCc
Q psy886 142 DKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAEKNGPQMCENDRN 221 (962)
Q Consensus 142 ~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lTGEs~Pv~k~~g~~~~~~~~~~~~~~~~~~~~ 221 (962)
|+ +++||+++|+|||+|.|++||+||+||+|++|.+. ||||+|||||.||.|++|.
T Consensus 113 g~--~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG~~~---VDESaLTGES~PV~K~~g~------------------- 168 (673)
T PRK14010 113 GS--YEMIDASDLKKGHIVRVATGEQIPNDGKVIKGLAT---VDESAITGESAPVIKESGG------------------- 168 (673)
T ss_pred CE--EEEEEHHHcCCCCEEEECCCCcccCCeEEEEcceE---EecchhcCCCCceeccCCC-------------------
Confidence 88 79999999999999999999999999999987544 7777777777777775430
Q ss_pred cccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEEEeCCCCeecceEEEEeecCCeEEEEec
Q psy886 222 EHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQS 301 (962)
Q Consensus 222 ~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~VdeS 301 (962)
T Consensus 169 -------------------------------------------------------------------------------- 168 (673)
T PRK14010 169 -------------------------------------------------------------------------------- 168 (673)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEeccchhhHHHHhhccccccCCCchHHHHHHHHH
Q psy886 302 ILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGE 381 (962)
Q Consensus 302 ~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~T~~gki~~~~~~~~~~~tplq~~l~~~~~ 381 (962)
|+++ +|+||.+.+|+++++|+++|.+|++|||.+++++++.++||+|..+..+..
T Consensus 169 ------------------------d~~~-V~aGT~v~~G~~~i~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~ 223 (673)
T PRK14010 169 ------------------------DFDN-VIGGTSVASDWLEVEITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLM 223 (673)
T ss_pred ------------------------ccCe-eecCceeecceEEEEEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHH
Confidence 1124 999999999999999999999999999999999999999999988877655
Q ss_pred HHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhhhcCccCCchh
Q psy886 382 QLSKVISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPS 461 (962)
Q Consensus 382 ~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~Lp~~v~i~l~~~~~~m~k~~ilvr~~~~ 461 (962)
.+..+.++++ ++...+..+ .++ ...+...+++++++|||+||..++++++.|++||+|+|+++|++++
T Consensus 224 ~l~ii~l~~~--~~~~~~~~~------~~~----~~~~~~~val~V~~IP~aL~~~~~~~~~~g~~r~ak~gvLvk~~~a 291 (673)
T PRK14010 224 TLTIIFLVVI--LTMYPLAKF------LNF----NLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRS 291 (673)
T ss_pred HHhHHHHHHH--HHHHHHHhh------ccH----HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhhCCEEEeCcHH
Confidence 4443222222 221111111 011 1245677888889999999999999999999999999999999999
Q ss_pred hhhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcceEEEeCCccccCcceecCCCccCCCChHHHHHHHHHHh
Q psy886 462 VETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKIKGADYETLHELGTICI 541 (962)
Q Consensus 462 ~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 541 (962)
+|+||++|+||||||||||+|++.+.++...++ ....+++..+.
T Consensus 292 vE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~~------------------------------------~~~~~ll~~a~ 335 (673)
T PRK14010 292 VETCGDVNVLILDKTGTITYGNRMADAFIPVKS------------------------------------SSFERLVKAAY 335 (673)
T ss_pred HHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCCC------------------------------------ccHHHHHHHHH
Confidence 999999999999999999998777666532110 01123445566
Q ss_pred hccCCccccccccCceEEecChhHHHHHHHHHHcCCCCcccCCCchhhHHHhhhhHHhhhceeeEeecCCCCCceEEEEE
Q psy886 542 MCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYC 621 (962)
Q Consensus 542 lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvv~ 621 (962)
+|+.. ..+|++.|++.++++.+.... ..+...+||++++|+|++.+
T Consensus 336 ~~~~~-------------s~~P~~~AIv~~a~~~~~~~~---------------------~~~~~~~pF~~~~k~~gv~~ 381 (673)
T PRK14010 336 ESSIA-------------DDTPEGRSIVKLAYKQHIDLP---------------------QEVGEYIPFTAETRMSGVKF 381 (673)
T ss_pred HhcCC-------------CCChHHHHHHHHHHHcCCCch---------------------hhhcceeccccccceeEEEE
Confidence 77642 137999999999987654110 01122479999999999864
Q ss_pred ecCCCCCCCCCCCEEEEeCChHHHHhcccccccCCeeeeCCHHHHHHHHHHHHHHhcccchhheeeEEeeeCCCCccccc
Q psy886 622 TPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMN 701 (962)
Q Consensus 622 ~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~glRvl~~A~~~~~~~~~~~~ 701 (962)
+ + ..+.|||||.++++|+.. +...+. .+.+..++++ ++|+|+++++
T Consensus 382 ~----------g-~~i~kGa~~~il~~~~~~---g~~~~~------~~~~~~~~~a--~~G~~~l~v~------------ 427 (673)
T PRK14010 382 T----------T-REVYKGAPNSMVKRVKEA---GGHIPV------DLDALVKGVS--KKGGTPLVVL------------ 427 (673)
T ss_pred C----------C-EEEEECCHHHHHHHhhhc---CCCCch------HHHHHHHHHH--hCCCeEEEEE------------
Confidence 3 1 245699999999999752 221111 1334445554 7899998764
Q ss_pred cccccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCC--------------
Q psy886 702 LADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFT-------------- 767 (962)
Q Consensus 702 ~~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~-------------- 767 (962)
.|++++|+++++||+|||++++|++||++||+++|+||||+.||.+||+++||..
T Consensus 428 -----------~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~v~A~~~PedK~~iV 496 (673)
T PRK14010 428 -----------EDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDRFVAECKPEDKINVI 496 (673)
T ss_pred -----------ECCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCceEEcCCCHHHHHHHH
Confidence 2578999999999999999999999999999999999999999999999999942
Q ss_pred -------------CCccccCCCCCcCcEEEeccChhHHHHhhcccccccCChhHHHHHHHHhHHHHHHHHHHHHHHHHhh
Q psy886 768 -------------EEEDTTGKSYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSN 834 (962)
Q Consensus 768 -------------~~~~~~g~~l~~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~ai~~gR~i~~ni~k~i~~~l~~n 834 (962)
+|+.++.++|++||||||||+|||+|||||||||+||||++|+++|++||++|+|++|++.|+++.|
T Consensus 497 ~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~ 576 (673)
T PRK14010 497 REEQAKGHIVAMTGDGTNDAPALAEANVGLAMNSGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIAND 576 (673)
T ss_pred HHHHhCCCEEEEECCChhhHHHHHhCCEEEEeCCCCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeecc
Confidence 2344566788999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhC
Q psy886 835 IGEVVSIFLTAALG 848 (962)
Q Consensus 835 i~~~~~~~~~~~~~ 848 (962)
+++++.++.+.|..
T Consensus 577 ~~~~~~i~~a~~~~ 590 (673)
T PRK14010 577 IAKYFAILPAMFMA 590 (673)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999998877764
No 17
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=2e-81 Score=736.88 Aligned_cols=531 Identities=21% Similarity=0.277 Sum_probs=419.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccc-ccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC-eEEEEECC
Q psy886 65 IASTNFAVLFCLCPQVLALFEEHED-FNSTLTSFVEPFVILLILIANAIVGVWQERNAESAIEALKEYEPE-MGKVIRGD 142 (962)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~-~~~v~r~~ 142 (962)
.....++++.++++++++.+..... ...+...|..++++++.++++.+++.++|+|+++++++|+++.|+ +++|+|+|
T Consensus 33 ~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~vir~g 112 (679)
T PRK01122 33 NPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARKLREP 112 (679)
T ss_pred ChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECC
Confidence 3356667777777777665432110 011234577778888889999999999999999999999999886 79999988
Q ss_pred CccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeecccccCCCcceeecCCCCCCcccccCCCccccccCcc
Q psy886 143 KSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAEKNGPQMCENDRNE 222 (962)
Q Consensus 143 ~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lTGEs~Pv~k~~g~~~~~~~~~~~~~~~~~~~~~ 222 (962)
+. +++||+++|++||+|.|++||+||+||+|++|.+ .||||+|||||.||.|++|+
T Consensus 113 ~~-~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG~a---~VDESaLTGES~PV~K~~G~-------------------- 168 (679)
T PRK01122 113 GA-AEEVPATELRKGDIVLVEAGEIIPADGEVIEGVA---SVDESAITGESAPVIRESGG-------------------- 168 (679)
T ss_pred CE-EEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEccE---EEEcccccCCCCceEeCCCC--------------------
Confidence 63 6889999999999999999999999999998754 48888888888887775442
Q ss_pred ccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEEEeCCCCeecceEEEEeecCCeEEEEecC
Q psy886 223 HKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSI 302 (962)
Q Consensus 223 ~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~VdeS~ 302 (962)
T Consensus 169 -------------------------------------------------------------------------------- 168 (679)
T PRK01122 169 -------------------------------------------------------------------------------- 168 (679)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEeccchhhHHHHhhccccccCCCchHHHHHHHHHH
Q psy886 303 LTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQ 382 (962)
Q Consensus 303 LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~T~~gki~~~~~~~~~~~tplq~~l~~~~~~ 382 (962)
++.| +|+||.+.+|+++++|+++|.+|++|||.+++++++.++||+|..++.+...
T Consensus 169 -----------------------~~~~-V~aGT~v~~G~~~i~Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~ 224 (679)
T PRK01122 169 -----------------------DFSS-VTGGTRVLSDWIVIRITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAG 224 (679)
T ss_pred -----------------------ccCe-EEeceEEEeeeEEEEEEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHh
Confidence 0114 9999999999999999999999999999999999999999999999888777
Q ss_pred HHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhhhcCccCCchhh
Q psy886 383 LSKVISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSV 462 (962)
Q Consensus 383 l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~Lp~~v~i~l~~~~~~m~k~~ilvr~~~~~ 462 (962)
+..+.+++++.++.+.+ +. +.. ..+..++++++++|||+|+...+++...++.||+|+|+++|+++++
T Consensus 225 l~~i~l~~~~~~~~~~~--~~----g~~------~~l~~~iallV~aiP~alg~l~~~i~i~g~~r~ak~gvLvk~~~av 292 (679)
T PRK01122 225 LTIIFLLVVATLPPFAA--YS----GGA------LSITVLVALLVCLIPTTIGGLLSAIGIAGMDRVLQANVIATSGRAV 292 (679)
T ss_pred hhHHHHHHHHHHHHHHH--Hh----Cch------HHHHHHHHHHHHcccchhhhHHHHHHHHHHHHHhcCCeeecCchHH
Confidence 76555444444333221 11 111 1467789999999999999999999999999999999999999999
Q ss_pred hhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcceEEEeCCccccCcceecCCCccCCCChHHHHHHHHHHhh
Q psy886 463 ETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKIKGADYETLHELGTICIM 542 (962)
Q Consensus 463 E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l 542 (962)
|+||++|+||||||||||+|+|++++++..++. +. .+++..+++
T Consensus 293 E~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~---------------------------------~~---~~ll~~a~~ 336 (679)
T PRK01122 293 EAAGDVDTLLLDKTGTITLGNRQASEFLPVPGV---------------------------------TE---EELADAAQL 336 (679)
T ss_pred HHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCCC---------------------------------CH---HHHHHHHHH
Confidence 999999999999999999999999987643210 11 233445556
Q ss_pred ccCCccccccccCceEEecChhHHHHHHHHHH-cCCCCcccCCCchhhHHHhhhhHHhhhceeeEeecCCCCCceEEEEE
Q psy886 543 CNDSAIDFNEFKQAFEKVGEATETALIVLAEK-LNPFNVSKSGLGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYC 621 (962)
Q Consensus 543 cn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvv~ 621 (962)
|+... .+|...|+++++++ .+... .+..++....+||++.+|+|++.+
T Consensus 337 ~s~~s-------------~hP~~~AIv~~a~~~~~~~~------------------~~~~~~~~~~~pF~s~~~~~gv~~ 385 (679)
T PRK01122 337 SSLAD-------------ETPEGRSIVVLAKQRFNLRE------------------RDLQSLHATFVPFSAQTRMSGVDL 385 (679)
T ss_pred hcCCC-------------CCchHHHHHHHHHhhcCCCc------------------hhhccccceeEeecCcCceEEEEE
Confidence 65331 24677899998876 23210 011245567889999998888754
Q ss_pred ecCCCCCCCCCCCEEEEeCChHHHHhcccccccCCeeeeCCHHHHHHHHHHHHHHhcccchhheeeEEeeeCCCCccccc
Q psy886 622 TPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMN 701 (962)
Q Consensus 622 ~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~glRvl~~A~~~~~~~~~~~~ 701 (962)
. + ..|.|||+|.+++.|... +... .+++.+..++++ ++|+|++++|+
T Consensus 386 ~----------g-~~~~kGa~e~il~~~~~~---g~~~------~~~~~~~~~~~a--~~G~~~l~va~----------- 432 (679)
T PRK01122 386 D----------G-REIRKGAVDAIRRYVESN---GGHF------PAELDAAVDEVA--RKGGTPLVVAE----------- 432 (679)
T ss_pred C----------C-EEEEECCHHHHHHHHHhc---CCcC------hHHHHHHHHHHH--hCCCcEEEEEE-----------
Confidence 2 2 478999999999999642 1111 234555566664 88999999983
Q ss_pred cccccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCC--------------
Q psy886 702 LADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFT-------------- 767 (962)
Q Consensus 702 ~~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~-------------- 767 (962)
|++++|+++++||+|||++++|++||++||+++|+||||+.||.+||+++||.+
T Consensus 433 ------------~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~v~A~~~PedK~~iV 500 (679)
T PRK01122 433 ------------DNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDFLAEATPEDKLALI 500 (679)
T ss_pred ------------CCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcEEEccCCHHHHHHHH
Confidence 568999999999999999999999999999999999999999999999999942
Q ss_pred -------------CCccccCCCCCcCcEEEeccChhHHHHhhcccccccCChhHHHHHHHHhHHHHHHHHHHHHHHHHhh
Q psy886 768 -------------EEEDTTGKSYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSN 834 (962)
Q Consensus 768 -------------~~~~~~g~~l~~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~ai~~gR~i~~ni~k~i~~~l~~n 834 (962)
+|+.++.++|++||||||||+|||+|||||||||+||||++|++++++||++.-.--....|+++..
T Consensus 501 ~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~n~ 580 (679)
T PRK01122 501 RQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIAND 580 (679)
T ss_pred HHHHHcCCeEEEECCCcchHHHHHhCCEeEEeCCCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHHHH
Confidence 2445666788999999999999999999999999999999999999999999977777788998877
Q ss_pred HHHHHHHHHHHHh
Q psy886 835 IGEVVSIFLTAAL 847 (962)
Q Consensus 835 i~~~~~~~~~~~~ 847 (962)
++--+.++-+.|.
T Consensus 581 ~~~~~~i~p~~~~ 593 (679)
T PRK01122 581 VAKYFAIIPAMFA 593 (679)
T ss_pred HHHHHHHHHHHHH
Confidence 6655555544443
No 18
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=6.7e-80 Score=767.64 Aligned_cols=716 Identities=19% Similarity=0.198 Sum_probs=510.9
Q ss_pred hccCccccCCC------ChhHHHHHHHHHHHHHHHHHHHHhhhccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy886 49 FIPARVTSLSP------SENVHIASTNFAVLFCLCPQVLALFEEHEDFNSTLTSFVEPFVILLILIANAIVGVWQERNAE 122 (962)
Q Consensus 49 ~g~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 122 (962)
|..|.+...+. +..+++++..+..++.++..++.......... ....+...++++++..+...++.++++|++
T Consensus 87 f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~~-~~t~~~PL~~vl~v~~ike~~Ed~~r~k~d 165 (1178)
T PLN03190 87 FAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFG-RGASILPLAFVLLVTAVKDAYEDWRRHRSD 165 (1178)
T ss_pred CCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccCC-cchHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 55566654443 35556667888888888888887765444332 344566677777888888999999998888
Q ss_pred HHHHHHhccCCCeEEEEECCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeec--ceeeeecccccCCCcceeecC
Q psy886 123 SAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYS--TTIRIDQSILTGESVSVIKHT 200 (962)
Q Consensus 123 ~~l~~l~~~~~~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~--~~~~vdes~lTGEs~Pv~k~~ 200 (962)
+.+ .+..++|+|+|+ ++++++++|+|||+|.|++||+|||||+|++.+. +.++||||+|||||.|+.|.+
T Consensus 166 ~~~------N~~~~~v~~~~~--~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~ 237 (1178)
T PLN03190 166 RIE------NNRLAWVLVDDQ--FQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYA 237 (1178)
T ss_pred Hhh------cCcEEEEEECCe--EEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEecc
Confidence 765 367899999998 8999999999999999999999999999997333 568899999999999999987
Q ss_pred CCCCCcccccCCCccccccCccccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEEEeCCCC
Q psy886 201 DAVPDPRAEKNGPQMCENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGD 280 (962)
Q Consensus 201 g~~~~~~~~~~~~~~~~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd 280 (962)
++.+.... ....++ ...+. .+-|-. +
T Consensus 238 ~~~~~~~~-------------------------------~~~~~~---~~~i~-------~e~Pn~-------------~ 263 (1178)
T PLN03190 238 KQETLSKI-------------------------------PEKEKI---NGLIK-------CEKPNR-------------N 263 (1178)
T ss_pred cchhhhcc-------------------------------hhhhhc---eEEEE-------EeCCCc-------------c
Confidence 65321100 000000 00000 000000 0
Q ss_pred eecceEEEEeecCCeEEEEecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeec-eEEEEEEEeccchhhHHHH
Q psy886 281 KIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAG-KARGIVMGTGLNTAIGKIR 359 (962)
Q Consensus 281 ~vPaD~~ll~~~~~~l~VdeS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G-~~~~vV~~tG~~T~~gki~ 359 (962)
..--+| .+.++ |+.. +.+.+|++++||.+.+. +++|+|+|||++| |++
T Consensus 264 l~~F~G--------~i~~~-----~~~~---------------~l~~~n~llRG~~LrnT~~i~GvVVYTG~dT---K~~ 312 (1178)
T PLN03190 264 IYGFQA--------NMEVD-----GKRL---------------SLGPSNIILRGCELKNTAWAIGVAVYCGRET---KAM 312 (1178)
T ss_pred ceeEEE--------EEEEC-----CCcc---------------cCCccceeeccceecCCceEEEEEEEechhh---hHh
Confidence 011122 22221 2222 23446999999999776 7999999999999 788
Q ss_pred hhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCC----------------------CcchHHHHH
Q psy886 360 TEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHG----------------------GSWIKGAVY 417 (962)
Q Consensus 360 ~~~~~~~~~~tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~----------------------~~~~~~~~~ 417 (962)
.+...++.+.|++++++|++..+++.+.+++|+++.++...+....... ..|....+.
T Consensus 313 ~N~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (1178)
T PLN03190 313 LNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFF 392 (1178)
T ss_pred hcCCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhHHHHH
Confidence 8877778899999999999999998888888877765542221100000 001011133
Q ss_pred HHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhhhc----------CccCCchhhhhcCCeeEEEecCCCcccCCceEEE
Q psy886 418 YFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKN----------AIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVS 487 (962)
Q Consensus 418 ~~~~~i~l~v~~iP~~Lp~~v~i~l~~~~~~m~k~~----------ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~ 487 (962)
.|..++.++...||++|++++++++..++.+|.+++ +.||+.+.+|+||+|++||+|||||||+|+|+++
T Consensus 393 ~f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk 472 (1178)
T PLN03190 393 TFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQ 472 (1178)
T ss_pred HHHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEE
Confidence 456667788899999999999999988899998877 7799999999999999999999999999999999
Q ss_pred EEEEeccccCCCCCcc-----eE--EEeCCccccCcceecC-----CC--ccCCCChHHHHHHHHHHhhccCCccccc-c
Q psy886 488 RMFIFDKIEGSDSSFL-----EF--EITGSTYEPIGDVFLN-----GS--KIKGADYETLHELGTICIMCNDSAIDFN-E 552 (962)
Q Consensus 488 ~~~~~~~~~~~~~~~~-----~~--~~~~~~~~~~~~~~~~-----~~--~~~~~~~~~l~~~~~~~~lcn~~~~~~~-~ 552 (962)
+|++++..|+...... .+ ...+..+.|......+ .. .......+.+.+++.++++||++.+... +
T Consensus 473 ~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~ 552 (1178)
T PLN03190 473 CASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDD 552 (1178)
T ss_pred EEEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCC
Confidence 9999887765321100 00 0111111111111000 00 0001112356788999999999876321 1
Q ss_pred c-c----CceEEecChhHHHHHHHHHHcCCCCcccCCCchhhHHHhhhhHHhhhceeeEeecCCCCCceEEEEEecCCCC
Q psy886 553 F-K----QAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSS 627 (962)
Q Consensus 553 ~-~----~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvv~~~~~~~ 627 (962)
. . ...+..++|+|.||+.+|++.|+....+..-.. .....+.+..|+++.++||+|+||||||+++.++
T Consensus 553 ~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i----~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~-- 626 (1178)
T PLN03190 553 TSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHI----VIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPD-- 626 (1178)
T ss_pred CCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeE----EEeeccceecceeEEEecccccccEEEEEEEcCC--
Confidence 0 1 122445699999999999999985554332110 0011234567999999999999999999998643
Q ss_pred CCCCCCCEEEEeCChHHHHhcccccccCCeeeeCCHHHHHHHHHHHHHHhcccchhheeeEEeeeCCCCcccccc-----
Q psy886 628 KLGSSGPKLFVKGAPEGVLERCTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNL----- 702 (962)
Q Consensus 628 ~~~~~~~~~~~KGA~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~glRvl~~A~~~~~~~~~~~~~----- 702 (962)
+.+++|+|||||.|+++|+... +++.++++.+.+++|+ ++|+|||++|||+++.++.+...
T Consensus 627 ----~~~~l~~KGA~e~il~~~~~~~--------~~~~~~~~~~~l~~~a--~~GlRtL~lA~k~l~~~e~~~~~~~~~~ 692 (1178)
T PLN03190 627 ----KTVKVFVKGADTSMFSVIDRSL--------NMNVIRATEAHLHTYS--SLGLRTLVVGMRELNDSEFEQWHFSFEA 692 (1178)
T ss_pred ----CcEEEEEecCcHHHHHhhcccc--------cchhHHHHHHHHHHHH--hcCCceEEEEEEeCCHHHHhhHHHHHHH
Confidence 1578999999999999997542 2235667788888886 89999999999998653211100
Q ss_pred ----------ccccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCcc-
Q psy886 703 ----------ADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEED- 771 (962)
Q Consensus 703 ----------~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~~~~- 771 (962)
......+.+|+||+|+|+++++||||++++++|+.|++|||+|||+|||+++||++||++|||++++..
T Consensus 693 a~~~~~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~ 772 (1178)
T PLN03190 693 ASTALIGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQ 772 (1178)
T ss_pred hhhhhhhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCee
Confidence 001123467999999999999999999999999999999999999999999999999999999865310
Q ss_pred -------------------------------------------------ccCCCC-------------------------
Q psy886 772 -------------------------------------------------TTGKSY------------------------- 777 (962)
Q Consensus 772 -------------------------------------------------~~g~~l------------------------- 777 (962)
++|.++
T Consensus 773 i~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~c 852 (1178)
T PLN03190 773 IIINSNSKESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCC 852 (1178)
T ss_pred EEecCCchhhHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEe
Confidence 112111
Q ss_pred -----------------------------------CcCcEEEeccChhH--HHHhhcccccccCChhHHHHHHH-HhHHH
Q psy886 778 -----------------------------------SKAEIGIAMGSGTA--VAKSASEMVLADDNFSSIVAAVE-EGRAI 819 (962)
Q Consensus 778 -----------------------------------~~AdVGIAmg~gtd--vAkeaADivL~dd~f~~iv~ai~-~gR~i 819 (962)
++|||||++ +|+| .|..|||+.+ ..|.-+.+++- +||..
T Consensus 853 R~sP~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGI-sG~EG~qA~~aSDfaI--~~Fr~L~rLLlvHGr~~ 929 (1178)
T PLN03190 853 RVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGI-SGQEGRQAVMASDFAM--GQFRFLVPLLLVHGHWN 929 (1178)
T ss_pred cCCHHHHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeeeee-cCchhHHHHHhhccch--hhhHHHHHHHHHhCHHH
Confidence 289999943 6666 7888999999 67999999988 69999
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHhCCCccchhHH--------HhhCccccccccc---CCCCcCccchh
Q psy886 820 YNNMKQFIRYLISSNIGEVVSIFLTAALGLPEALIKKI--------STTNRGKKKKLSY---NFLDISLLGPA 881 (962)
Q Consensus 820 ~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~q--------L~~d~~~a~al~~---e~~~~~~m~~p 881 (962)
|+++.+.+.|.+..|+..+++.+++.++-..++.+-.. ++.-.+|.+++|. +-|+..+++.|
T Consensus 930 y~R~s~~i~y~fYKN~~~~~~qf~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P 1002 (1178)
T PLN03190 930 YQRMGYMILYNFYRNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYP 1002 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCc
Confidence 99999999999999999999999988875544443332 1667788888854 44556667777
No 19
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=1.8e-77 Score=701.71 Aligned_cols=530 Identities=21% Similarity=0.287 Sum_probs=412.0
Q ss_pred HHHHHHHHHHHHHHHHhhhccccccccccchhH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC-eEEEEE-C
Q psy886 67 STNFAVLFCLCPQVLALFEEHEDFNSTLTSFVE---PFVILLILIANAIVGVWQERNAESAIEALKEYEPE-MGKVIR-G 141 (962)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~-~~~v~r-~ 141 (962)
...++++.++++++++.+............|++ .+++++.++++.+++.++|+|+++++++|+++.|+ .++|+| |
T Consensus 34 ~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a~vlr~d 113 (675)
T TIGR01497 34 VMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFAKLLRDD 113 (675)
T ss_pred HHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEeeC
Confidence 455666666777666543210000000011333 46667778899999999999999999999998877 588986 7
Q ss_pred CCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeecccccCCCcceeecCCCCCCcccccCCCccccccCc
Q psy886 142 DKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAEKNGPQMCENDRN 221 (962)
Q Consensus 142 ~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lTGEs~Pv~k~~g~~~~~~~~~~~~~~~~~~~~ 221 (962)
|+ +++||+++|++||+|.|++||+||+||+|++|.+. ||||+|||||.||.|++|+
T Consensus 114 g~--~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG~~~---VDESaLTGES~PV~K~~g~------------------- 169 (675)
T TIGR01497 114 GA--IDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGVAS---VDESAITGESAPVIKESGG------------------- 169 (675)
T ss_pred CE--EEEEEHHHCCCCCEEEECCCCEEeeeEEEEEccEE---EEcccccCCCCceeecCCC-------------------
Confidence 76 79999999999999999999999999999987444 8888888888888876442
Q ss_pred cccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEEEeCCCCeecceEEEEeecCCeEEEEec
Q psy886 222 EHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQS 301 (962)
Q Consensus 222 ~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~VdeS 301 (962)
.
T Consensus 170 -----------------------------------------------------------------------~-------- 170 (675)
T TIGR01497 170 -----------------------------------------------------------------------D-------- 170 (675)
T ss_pred -----------------------------------------------------------------------C--------
Confidence 0
Q ss_pred CCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEeccchhhHHHHhhccccccCCCchHHHHHHHHH
Q psy886 302 ILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGE 381 (962)
Q Consensus 302 ~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~T~~gki~~~~~~~~~~~tplq~~l~~~~~ 381 (962)
.+.+|+||.+.+|+++++|+++|.+|++|||.+++++++.++||+|..++.+..
T Consensus 171 --------------------------~~~V~aGT~v~~G~~~i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~ 224 (675)
T TIGR01497 171 --------------------------FASVTGGTRILSDWLVVECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLI 224 (675)
T ss_pred --------------------------cceeecCcEEEeeEEEEEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHH
Confidence 013899999999999999999999999999999999999999999999988877
Q ss_pred HHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhhhcCccCCchh
Q psy886 382 QLSKVISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPS 461 (962)
Q Consensus 382 ~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~Lp~~v~i~l~~~~~~m~k~~ilvr~~~~ 461 (962)
.+..+.+++++.++.+. .+ .+.. ..+..++++++++|||+|+...+.....++.||+|+|+++|++.+
T Consensus 225 ~l~~v~li~~~~~~~~~--~~----~~~~------~~~~~lvallV~aiP~aLg~l~~av~iag~~r~ar~gvLvK~~~a 292 (675)
T TIGR01497 225 ALTLVFLLVTATLWPFA--AY----GGNA------ISVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVLGFNVIATSGRA 292 (675)
T ss_pred HHHHHHHHHHHHHHHHH--Hh----cChh------HHHHHHHHHHHHhCchhhhhHHHHHHHHHHHHHHHCCeEeeCcHH
Confidence 66554444433333221 11 1111 135667899999999988777777777899999999999999999
Q ss_pred hhhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcceEEEeCCccccCcceecCCCccCCCChHHHHHHHHHHh
Q psy886 462 VETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKIKGADYETLHELGTICI 541 (962)
Q Consensus 462 ~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 541 (962)
+|+||++|+||||||||||+|+|++.+++..++. + ..+++..++
T Consensus 293 vE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~---------------------------------~---~~~ll~~aa 336 (675)
T TIGR01497 293 VEACGDVDTLLLDKTGTITLGNRLASEFIPAQGV---------------------------------D---EKTLADAAQ 336 (675)
T ss_pred HHHhhCCCEEEECCCCcccCCCeEEEEEEecCCC---------------------------------c---HHHHHHHHH
Confidence 9999999999999999999999999988643210 1 123344455
Q ss_pred hccCCccccccccCceEEecChhHHHHHHHHHHcCCCCcccCCCchhhHHHhhhhHHhhhceeeEeecCCCCCceEEEEE
Q psy886 542 MCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYC 621 (962)
Q Consensus 542 lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvv~ 621 (962)
+|+.. ..+|.+.|++.++++.+.... ...++.....||++.+|+|++.+
T Consensus 337 ~~~~~-------------s~hP~a~Aiv~~a~~~~~~~~------------------~~~~~~~~~~pf~~~~~~sg~~~ 385 (675)
T TIGR01497 337 LASLA-------------DDTPEGKSIVILAKQLGIRED------------------DVQSLHATFVEFTAQTRMSGINL 385 (675)
T ss_pred HhcCC-------------CCCcHHHHHHHHHHHcCCCcc------------------ccccccceEEEEcCCCcEEEEEE
Confidence 56532 135888999999987654211 01123456789999988777644
Q ss_pred ecCCCCCCCCCCCEEEEeCChHHHHhcccccccCCeeeeCCHHHHHHHHHHHHHHhcccchhheeeEEeeeCCCCccccc
Q psy886 622 TPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMN 701 (962)
Q Consensus 622 ~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~glRvl~~A~~~~~~~~~~~~ 701 (962)
.+ + ..+.|||||.+++.|... +... . .++.+..++++ ++|+|++++|+
T Consensus 386 ~~---------g-~~~~kGa~e~i~~~~~~~---g~~~--~----~~~~~~~~~~a--~~G~r~l~va~----------- 433 (675)
T TIGR01497 386 DN---------G-RMIRKGAVDAIKRHVEAN---GGHI--P----TDLDQAVDQVA--RQGGTPLVVCE----------- 433 (675)
T ss_pred eC---------C-eEEEECCHHHHHHHHHhc---CCCC--c----HHHHHHHHHHH--hCCCeEEEEEE-----------
Confidence 31 2 578999999999988521 1111 1 23445556664 89999999984
Q ss_pred cccccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCC--------------
Q psy886 702 LADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFT-------------- 767 (962)
Q Consensus 702 ~~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~-------------- 767 (962)
+.+++|+++++||+|||++++|++||++||+++|+||||+.||.++|+++||.+
T Consensus 434 ------------~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~v~a~~~PedK~~~v 501 (675)
T TIGR01497 434 ------------DNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDDFIAEATPEDKIALI 501 (675)
T ss_pred ------------CCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCEEEcCCCHHHHHHHH
Confidence 347999999999999999999999999999999999999999999999999942
Q ss_pred -------------CCccccCCCCCcCcEEEeccChhHHHHhhcccccccCChhHHHHHHHHhHHHHHHHHHHHHHHHHhh
Q psy886 768 -------------EEEDTTGKSYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSN 834 (962)
Q Consensus 768 -------------~~~~~~g~~l~~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~ai~~gR~i~~ni~k~i~~~l~~n 834 (962)
+|+.++.+.|++||||||||+||++||++||+||+||||++|++++++||+++-+......|+++.+
T Consensus 502 ~~lq~~g~~VamvGDG~NDapAL~~AdvGiAm~~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~ 581 (675)
T TIGR01497 502 RQEQAEGKLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIAND 581 (675)
T ss_pred HHHHHcCCeEEEECCCcchHHHHHhCCEeEEeCCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeeccc
Confidence 1233445567899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhC
Q psy886 835 IGEVVSIFLTAALG 848 (962)
Q Consensus 835 i~~~~~~~~~~~~~ 848 (962)
++.-+.++-+.|..
T Consensus 582 ~~~~~~~~~~~~~~ 595 (675)
T TIGR01497 582 VAKYFAIIPAIFAA 595 (675)
T ss_pred HHHHHHHHHHHHHh
Confidence 99888777666653
No 20
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-76 Score=693.41 Aligned_cols=539 Identities=25% Similarity=0.331 Sum_probs=435.9
Q ss_pred cchhHHHHHHhhhhhhccCccccCCCChhHHHHHHHHHHHHHHHHHHHHhhhccccccccccchhHHHHHHHHHHHHHHH
Q psy886 34 ITLGAFCRLRLRQIDFIPARVTSLSPSENVHIASTNFAVLFCLCPQVLALFEEHEDFNSTLTSFVEPFVILLILIANAIV 113 (962)
Q Consensus 34 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 113 (962)
....|+++++..+..|+...++++..+..++....+|+.++++.....++++.+..+.. .+|.++..+++++.+++++
T Consensus 113 ~~~~~~~~~l~~~v~~~~g~~f~~~a~~~l~~~~~~md~Lv~la~~~A~~~s~~~~~~~--~yf~~aa~ii~l~~~G~~L 190 (713)
T COG2217 113 FLLPWVSFLLATPVLFYGGWPFYRGAWRALRRGRLNMDTLVALATIGAYAYSLYATLFP--VYFEEAAMLIFLFLLGRYL 190 (713)
T ss_pred hhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHhhh--hHHHHHHHHHHHHHHHHHH
Confidence 34578999999999999999999988888898899999999999999988888765544 6788889999999999999
Q ss_pred HHHHHHHHHHHHHHHhccCCCeEEEEECCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeecccccCCC
Q psy886 114 GVWQERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGES 193 (962)
Q Consensus 114 ~~~~~~~~~~~l~~l~~~~~~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lTGEs 193 (962)
+.+...|+++++++|.++.|+++++++++.. +++||.++|++||+|.|+|||+||+||+|++|++. ||||+|||||
T Consensus 191 E~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~-~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~G~s~---vDeS~iTGEs 266 (713)
T COG2217 191 EARAKGRARRAIRALLDLAPKTATVVRGDGE-EEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGSSS---VDESMLTGES 266 (713)
T ss_pred HHHHHHHHHHHHHHHHccCCCEEEEEecCCc-EEEEEHHHCCCCCEEEECCCCEecCCeEEEeCcEE---eecchhhCCC
Confidence 9999999999999999999999988885433 79999999999999999999999999999988777 7777777777
Q ss_pred cceeecCCCCCCcccccCCCccccccCccccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCE
Q psy886 194 VSVIKHTDAVPDPRAEKNGPQMCENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDI 273 (962)
Q Consensus 194 ~Pv~k~~g~~~~~~~~~~~~~~~~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDI 273 (962)
.||+|.+|
T Consensus 267 ~PV~k~~G------------------------------------------------------------------------ 274 (713)
T COG2217 267 LPVEKKPG------------------------------------------------------------------------ 274 (713)
T ss_pred CCEecCCC------------------------------------------------------------------------
Confidence 77777554
Q ss_pred EEeCCCCeecceEEEEeecCCeEEEEecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEeccch
Q psy886 274 VEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLNT 353 (962)
Q Consensus 274 V~l~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~T 353 (962)
+.||+||.+.+|..+..|+++|.||
T Consensus 275 -------------------------------------------------------d~V~aGtiN~~G~l~i~vt~~~~dt 299 (713)
T COG2217 275 -------------------------------------------------------DEVFAGTVNLDGSLTIRVTRVGADT 299 (713)
T ss_pred -------------------------------------------------------CEEeeeEEECCccEEEEEEecCccC
Confidence 3489999999999999999999999
Q ss_pred hhHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHhhcCCc
Q psy886 354 AIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVAAIPEG 433 (962)
Q Consensus 354 ~~gki~~~~~~~~~~~tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~ 433 (962)
.+++|.+++++++..|+|.|+..|+++.++.+++++++++.|++|+... +.+|. ..+..++++++++|||+
T Consensus 300 ~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~-----~~~~~----~a~~~a~avLVIaCPCA 370 (713)
T COG2217 300 TLARIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWPLFG-----GGDWE----TALYRALAVLVIACPCA 370 (713)
T ss_pred HHHHHHHHHHHHhhCCchHHHHHHHHHHccHHHHHHHHHHHHHHHHHhc-----CCcHH----HHHHHHHhheeeeCccH
Confidence 9999999999999999999999999999999988888888777654221 12332 35788999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhhcCccCCchhhhhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcceEEEeCCccc
Q psy886 434 LPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYE 513 (962)
Q Consensus 434 Lp~~v~i~l~~~~~~m~k~~ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (962)
|.+++|+++..+..+.+|+|+++|+..++|.++++|+++||||||||+|+|+|.++...++
T Consensus 371 LgLAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~------------------- 431 (713)
T COG2217 371 LGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDG------------------- 431 (713)
T ss_pred HHhHHHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecCCC-------------------
Confidence 9999999999999999999999999999999999999999999999999999999876431
Q ss_pred cCcceecCCCccCCCChHHHHHHHHHHhhccCCccccccccCceEEecChhHHHHHHHHHHcCCCCcccCCCchhhHHHh
Q psy886 514 PIGDVFLNGSKIKGADYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQAIA 593 (962)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~ 593 (962)
+.+.+..+... + .....+|.-.|+++.++..+.....
T Consensus 432 ---------------~e~~~L~laAa--l--------------E~~S~HPiA~AIv~~a~~~~~~~~~------------ 468 (713)
T COG2217 432 ---------------DEDELLALAAA--L--------------EQHSEHPLAKAIVKAAAERGLPDVE------------ 468 (713)
T ss_pred ---------------CHHHHHHHHHH--H--------------HhcCCChHHHHHHHHHHhcCCCCcc------------
Confidence 11233333322 2 1124679999999988766521110
Q ss_pred hhhHHhhhceeeEeecCCCCCceEEEEEecCCCCCCCCCCCEEEEeCChHHHHhcccccccCCeeeeCCHHHHHHHHHHH
Q psy886 594 VRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKFPLTATLKNRILDLT 673 (962)
Q Consensus 594 ~~~~~~~~~~~~~~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~ 673 (962)
...++| .+-+...+. + ..+.-|.+.-+.+.-. +.+. .....
T Consensus 469 ----------~~~~i~----G~Gv~~~v~----------g-~~v~vG~~~~~~~~~~---------~~~~-----~~~~~ 509 (713)
T COG2217 469 ----------DFEEIP----GRGVEAEVD----------G-ERVLVGNARLLGEEGI---------DLPL-----LSERI 509 (713)
T ss_pred ----------ceeeec----cCcEEEEEC----------C-EEEEEcCHHHHhhcCC---------Cccc-----hhhhH
Confidence 011111 111111110 1 3445566654433210 0110 11112
Q ss_pred HHHhcccchhheeeEEeeeCCCCccccccccccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEcCCCH
Q psy886 674 RQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNK 753 (962)
Q Consensus 674 ~~~~~~~~glRvl~~A~~~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~ 753 (962)
+.+. .+|.-++.++ .|..++|+++++|++||+++++|++||+.||+++|+||||+
T Consensus 510 ~~~~--~~G~t~v~va-----------------------~dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~ 564 (713)
T COG2217 510 EALE--SEGKTVVFVA-----------------------VDGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNR 564 (713)
T ss_pred HHHH--hcCCeEEEEE-----------------------ECCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCH
Confidence 2221 3444344443 45589999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCC---------------------------CCccccCCCCCcCcEEEeccChhHHHHhhcccccccCCh
Q psy886 754 ATAEAICRRIGVFT---------------------------EEEDTTGKSYSKAEIGIAMGSGTAVAKSASEMVLADDNF 806 (962)
Q Consensus 754 ~TA~~IA~~~GI~~---------------------------~~~~~~g~~l~~AdVGIAmg~gtdvAkeaADivL~dd~f 806 (962)
.||.+||+++||.. +|+.++.++|++||||||||+|||+|+|+||++|++||+
T Consensus 565 ~~A~~iA~~lGId~v~AellPedK~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~GtDvA~eaADvvL~~~dL 644 (713)
T COG2217 565 RTAEAIAKELGIDEVRAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMRDDL 644 (713)
T ss_pred HHHHHHHHHcChHhheccCCcHHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecCCcHHHHHhCCEEEecCCH
Confidence 99999999999932 245567788999999999999999999999999999999
Q ss_pred hHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHH
Q psy886 807 SSIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVS 840 (962)
Q Consensus 807 ~~iv~ai~~gR~i~~ni~k~i~~~l~~ni~~~~~ 840 (962)
..++.+|+.+|++++|||+|+.|.+.||...+.+
T Consensus 645 ~~v~~ai~lsr~t~~~IkqNl~~A~~yn~~~ipl 678 (713)
T COG2217 645 SAVPEAIDLSRATRRIIKQNLFWAFGYNAIAIPL 678 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999765433
No 21
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=3.8e-71 Score=670.61 Aligned_cols=511 Identities=21% Similarity=0.312 Sum_probs=409.6
Q ss_pred cCccccCCCChhHHHHH-HHHHHHHHHHHHHHHhhhccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy886 51 PARVTSLSPSENVHIAS-TNFAVLFCLCPQVLALFEEHEDFNSTLTSFVEPFVILLILIANAIVGVWQERNAESAIEALK 129 (962)
Q Consensus 51 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~l~ 129 (962)
...+++++++..++... .+|..++++..+..++++ .|.++..++++++++++++.++++|+++.+++|+
T Consensus 169 ~~~~~~~~a~~~l~~~~~~~~~~L~~~a~~~a~~~~----------~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~ 238 (741)
T PRK11033 169 GLYPIARKALRLIRSGSPFAIETLMSVAAIGALFIG----------ATAEAAMVLLLFLIGERLEGYAASRARRGVSALM 238 (741)
T ss_pred HHHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHc----------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45678888888777654 477777777766555432 3678889999999999999999999999999999
Q ss_pred ccCCCeEEEEECCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeecccccCCCcceeecCCCCCCcccc
Q psy886 130 EYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAE 209 (962)
Q Consensus 130 ~~~~~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lTGEs~Pv~k~~g~~~~~~~~ 209 (962)
++.|.+++++|||+ +++||.++|+|||+|+|++||+||+||+|++|++. ||||+|||||.||+|
T Consensus 239 ~l~p~~a~vir~g~--~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g~~~---vdes~lTGEs~Pv~k----------- 302 (741)
T PRK11033 239 ALVPETATRLRDGE--REEVAIADLRPGDVIEVAAGGRLPADGKLLSPFAS---FDESALTGESIPVER----------- 302 (741)
T ss_pred hCCCCEEEEEECCE--EEEEEHHHCCCCCEEEECCCCEEecceEEEECcEE---eecccccCCCCCEec-----------
Confidence 99999999999998 79999999999999999999999999999976433 555555555555555
Q ss_pred cCCCccccccCccccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEEEeCCCCeecceEEEE
Q psy886 210 KNGPQMCENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLI 289 (962)
Q Consensus 210 ~~~~~~~~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll 289 (962)
T Consensus 303 -------------------------------------------------------------------------------- 302 (741)
T PRK11033 303 -------------------------------------------------------------------------------- 302 (741)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eecCCeEEEEecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEeccchhhHHHHhhccccccCC
Q psy886 290 KIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLNTAIGKIRTEMSETEEIK 369 (962)
Q Consensus 290 ~~~~~~l~VdeS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~T~~gki~~~~~~~~~~~ 369 (962)
.++ +.+|+||.+.+|.+++.|+++|.+|.+|||.+++++++.++
T Consensus 303 -----------------------~~G-------------d~V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k 346 (741)
T PRK11033 303 -----------------------ATG-------------EKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERR 346 (741)
T ss_pred -----------------------CCC-------------CeeccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhhccC
Confidence 332 46899999999999999999999999999999999999999
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHH
Q psy886 370 TPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRM 449 (962)
Q Consensus 370 tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~Lp~~v~i~l~~~~~~m 449 (962)
+|+|+.++++++++.++++++++++|+++...+ +.+|.. .+..++++++++|||+|.++.++++..+..++
T Consensus 347 ~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~-----~~~~~~----~i~~a~svlviacPcaL~latP~a~~~~l~~a 417 (741)
T PRK11033 347 APIERFIDRFSRIYTPAIMLVALLVILVPPLLF-----AAPWQE----WIYRGLTLLLIGCPCALVISTPAAITSGLAAA 417 (741)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----cCCHHH----HHHHHHHHHHHhchhhhhhhhHHHHHHHHHHH
Confidence 999999999999999999999988887753222 223422 46678999999999999999999999999999
Q ss_pred hhhcCccCCchhhhhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcceEEEeCCccccCcceecCCCccCCCC
Q psy886 450 AKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKIKGAD 529 (962)
Q Consensus 450 ~k~~ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (962)
+|+|+++|+..++|+|+++++||||||||||+|+|+|.+++..++. +
T Consensus 418 ar~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~---------------------------------~ 464 (741)
T PRK11033 418 ARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPATGI---------------------------------S 464 (741)
T ss_pred HHCCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEecCCC---------------------------------C
Confidence 9999999999999999999999999999999999999998653310 1
Q ss_pred hHHHHHHHHHHhhccCCccccccccCceEEecChhHHHHHHHHHHcCCCCcccCCCchhhHHHhhhhHHhhhceeeEeec
Q psy886 530 YETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQAIAVRQDVETKWKKEFTLE 609 (962)
Q Consensus 530 ~~~l~~~~~~~~lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 609 (962)
.+.+..+. .++. ....+|.+.|++.++.+.+. .+|
T Consensus 465 ~~~~l~~a--a~~e--------------~~s~hPia~Ai~~~a~~~~~-----------------------------~~~ 499 (741)
T PRK11033 465 ESELLALA--AAVE--------------QGSTHPLAQAIVREAQVRGL-----------------------------AIP 499 (741)
T ss_pred HHHHHHHH--HHHh--------------cCCCCHHHHHHHHHHHhcCC-----------------------------CCC
Confidence 12222221 1111 12368999999998876442 246
Q ss_pred CCCCCceEEEE-EecCCCCCCCCCCCEEEEeCChHHHHhcccccccCCeeeeCCHHHHHHHHHHHHHHhcccchhheeeE
Q psy886 610 FSRDRKSMSSY-CTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGL 688 (962)
Q Consensus 610 F~s~rk~msvv-~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~glRvl~~ 688 (962)
|.++++.+.-. ++..- + + ..+.-|+++.+.+ ++++. ....+.+. .+|.|++++
T Consensus 500 ~~~~~~~~~g~Gv~~~~----~--g-~~~~ig~~~~~~~-------------~~~~~----~~~~~~~~--~~g~~~v~v 553 (741)
T PRK11033 500 EAESQRALAGSGIEGQV----N--G-ERVLICAPGKLPP-------------LADAF----AGQINELE--SAGKTVVLV 553 (741)
T ss_pred CCcceEEEeeEEEEEEE----C--C-EEEEEecchhhhh-------------ccHHH----HHHHHHHH--hCCCEEEEE
Confidence 77777766421 21110 0 1 1234577776532 12222 22334443 789999988
Q ss_pred EeeeCCCCccccccccccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCC
Q psy886 689 ATADNPLKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTE 768 (962)
Q Consensus 689 A~~~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~ 768 (962)
|+ |.+++|+++++|++|+|++++|++||++|++++|+|||++.+|.++|+++||...
T Consensus 554 a~-----------------------~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~~~ 610 (741)
T PRK11033 554 LR-----------------------NDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGIDFR 610 (741)
T ss_pred EE-----------------------CCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCee
Confidence 84 4579999999999999999999999999999999999999999999999999421
Q ss_pred -------------------------CccccCCCCCcCcEEEeccChhHHHHhhcccccccCChhHHHHHHHHhHHHHHHH
Q psy886 769 -------------------------EEDTTGKSYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNM 823 (962)
Q Consensus 769 -------------------------~~~~~g~~l~~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~ai~~gR~i~~ni 823 (962)
|+.++.+++++||||||||+|+|+++++||++|++|++..|++++++||++++||
T Consensus 611 ~~~~p~~K~~~v~~l~~~~~v~mvGDgiNDapAl~~A~vgia~g~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I 690 (741)
T PRK11033 611 AGLLPEDKVKAVTELNQHAPLAMVGDGINDAPAMKAASIGIAMGSGTDVALETADAALTHNRLRGLAQMIELSRATHANI 690 (741)
T ss_pred cCCCHHHHHHHHHHHhcCCCEEEEECCHHhHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHH
Confidence 1123334567999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhHHHHH
Q psy886 824 KQFIRYLISSNIGEVV 839 (962)
Q Consensus 824 ~k~i~~~l~~ni~~~~ 839 (962)
|+|+.|.+.||+..+.
T Consensus 691 ~~nl~~a~~~n~~~i~ 706 (741)
T PRK11033 691 RQNITIALGLKAIFLV 706 (741)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999975443
No 22
>KOG0207|consensus
Probab=100.00 E-value=6.1e-71 Score=630.02 Aligned_cols=572 Identities=20% Similarity=0.246 Sum_probs=440.4
Q ss_pred hhHHHHHHhhhhhhccCccccCCCChhHHHHHHHHHHHHHHHHHHHHhhhccccc-----cccccchhHHHHHHHHHHHH
Q psy886 36 LGAFCRLRLRQIDFIPARVTSLSPSENVHIASTNFAVLFCLCPQVLALFEEHEDF-----NSTLTSFVEPFVILLILIAN 110 (962)
Q Consensus 36 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~i~~~~~~~ 110 (962)
..++++++..+.+|+.+++++..+++.+++...+|+.++++...+.+.|+..... ..+.++|..+..++.++.++
T Consensus 275 ~~~l~~~L~~~vqf~~G~~fy~~A~ksL~~g~~nMdvLv~L~t~aay~~S~~~~~~~~~~~~~~tfFdt~~MLi~fi~lg 354 (951)
T KOG0207|consen 275 GNSLSFVLATPVQFVGGRPFYLAAYKSLKRGSANMDVLVVLGTTAAYFYSIFSLLAAVVFDSPPTFFDTSPMLITFITLG 354 (951)
T ss_pred hhHHHhhhheeeEEecceeeHHHHHHHHhcCCCCceeehhhHHHHHHHHHHHHHHHHHHccCcchhccccHHHHHHHHHH
Confidence 4578889999999999999999999999999888888877777776666543211 11445677777788889999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCeEEEEECCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeeccccc
Q psy886 111 AIVGVWQERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILT 190 (962)
Q Consensus 111 ~~~~~~~~~~~~~~l~~l~~~~~~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lT 190 (962)
++++...++|+..++.+|+++.|..+.++.+|+. +++||.+.|++||+|.|.||++||+||+|++|++. ||||++|
T Consensus 355 r~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~-e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~Gss~---VDEs~iT 430 (951)
T KOG0207|consen 355 RWLESLAKGKTSEALSKLMSLAPSKATIIEDGSE-EKEIPVDLVQVGDIVKVKPGEKIPVDGVVVDGSSE---VDESLIT 430 (951)
T ss_pred HHHHHHhhccchHHHHHHhhcCcccceEeecCCc-ceEeeeeeeccCCEEEECCCCccccccEEEeCcee---echhhcc
Confidence 9999999999999999999999999999999975 79999999999999999999999999999987776 6766666
Q ss_pred CCCcceeecCCCCCCcccccCCCccccccCccccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCC
Q psy886 191 GESVSVIKHTDAVPDPRAEKNGPQMCENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVP 270 (962)
Q Consensus 191 GEs~Pv~k~~g~~~~~~~~~~~~~~~~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~ 270 (962)
||++||.|++|
T Consensus 431 GEs~PV~Kk~g--------------------------------------------------------------------- 441 (951)
T KOG0207|consen 431 GESMPVPKKKG--------------------------------------------------------------------- 441 (951)
T ss_pred CCceecccCCC---------------------------------------------------------------------
Confidence 66666666544
Q ss_pred CCEEEeCCCCeecceEEEEeecCCeEEEEecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEec
Q psy886 271 GDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTG 350 (962)
Q Consensus 271 GDIV~l~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG 350 (962)
..|.+||...+|+....++.+|
T Consensus 442 ----------------------------------------------------------s~ViaGsiN~nG~l~VkaT~~g 463 (951)
T KOG0207|consen 442 ----------------------------------------------------------STVIAGSINLNGTLLVKATKVG 463 (951)
T ss_pred ----------------------------------------------------------CeeeeeeecCCceEEEEEEecc
Confidence 4588999999999999999999
Q ss_pred cchhhHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-CCCCCCcchHHHHHHHHHHHHHHHhh
Q psy886 351 LNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFN-DPAHGGSWIKGAVYYFKIAVALAVAA 429 (962)
Q Consensus 351 ~~T~~gki~~~~~~~~~~~tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~i~l~v~~ 429 (962)
.||.+++|.+++++++..++|+|+..|+++.++.++++++++..|++|+.... .......|...+...|..++++++++
T Consensus 464 ~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~~~~~~~~~~~~~~a~~~aisVlviA 543 (951)
T KOG0207|consen 464 GDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIVFKYPRSFFDAFSHAFQLAISVLVIA 543 (951)
T ss_pred ccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHccccccCcchhhHHHHHHHHhhheEEEEE
Confidence 99999999999999999999999999999999999999999988888753322 11122334456677899999999999
Q ss_pred cCCchHHHHHHHHHHHHHHHhhhcCccCCchhhhhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcceEEEeC
Q psy886 430 IPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITG 509 (962)
Q Consensus 430 iP~~Lp~~v~i~l~~~~~~m~k~~ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 509 (962)
|||+|.++.+++...+....+++|+|+|..+.+|.+.+++++.||||||||+|+++|.++....+.
T Consensus 544 CPCaLgLATPtAvmvatgvgA~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~-------------- 609 (951)
T KOG0207|consen 544 CPCALGLATPTAVMVATGVGATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNP-------------- 609 (951)
T ss_pred CchhhhcCCceEEEEEechhhhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCc--------------
Confidence 999999999999999999999999999999999999999999999999999999999998765421
Q ss_pred CccccCcceecCCCccCCCChHHHHHHHHHHhhccCCccccccccCceEEecChhHHHHHHHHHHcCCCCcccCCCchhh
Q psy886 510 STYEPIGDVFLNGSKIKGADYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRRE 589 (962)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~~~~~ 589 (962)
....+...+. .+. .....+|.-.|++.+|++.+.....
T Consensus 610 ------------------~~~~e~l~~v--~a~--------------Es~SeHPig~AIv~yak~~~~~~~~-------- 647 (951)
T KOG0207|consen 610 ------------------ISLKEALALV--AAM--------------ESGSEHPIGKAIVDYAKEKLVEPNP-------- 647 (951)
T ss_pred ------------------ccHHHHHHHH--HHH--------------hcCCcCchHHHHHHHHHhcccccCc--------
Confidence 0111222221 111 1124579999999999876521000
Q ss_pred HHHhhhhHHhhhceeeEeecCCCCCceEEEEEecCCCCCCCCCCCEEEEeCChHHHHhcccccccCCeeeeCCHHHHHHH
Q psy886 590 QAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKFPLTATLKNRI 669 (962)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~~~~~~l~~~~~~~i 669 (962)
.+. +..-.|.-+.+...+.+. +.. .+-|.-+-+.+.- - +..+ .+
T Consensus 648 -----------~~~-~~~~~~pg~g~~~~~~~~----------~~~-i~iGN~~~~~r~~-------~--~~~~----~i 691 (951)
T KOG0207|consen 648 -----------EGV-LSFEYFPGEGIYVTVTVD----------GNE-VLIGNKEWMSRNG-------C--SIPD----DI 691 (951)
T ss_pred -----------ccc-ceeecccCCCcccceEEe----------eeE-EeechHHHHHhcC-------C--CCch----hH
Confidence 000 000011111111111111 111 2334433332211 0 1111 12
Q ss_pred HHHHHHHhcccchhheeeEEeeeCCCCccccccccccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEc
Q psy886 670 LDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVIT 749 (962)
Q Consensus 670 ~~~~~~~~~~~~glRvl~~A~~~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiT 749 (962)
+...++.. ..|.-+..++ .|.++.|+++++|++|+|+..+|+.||+.||+|+|+|
T Consensus 692 ~~~~~~~e--~~g~tvv~v~-----------------------vn~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLT 746 (951)
T KOG0207|consen 692 LDALTESE--RKGQTVVYVA-----------------------VNGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLT 746 (951)
T ss_pred HHhhhhHh--hcCceEEEEE-----------------------ECCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEc
Confidence 33333221 4455555444 4678999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHcCCCC---------------------------CCccccCCCCCcCcEEEeccChhHHHHhhcccccc
Q psy886 750 GDNKATAEAICRRIGVFT---------------------------EEEDTTGKSYSKAEIGIAMGSGTAVAKSASEMVLA 802 (962)
Q Consensus 750 GD~~~TA~~IA~~~GI~~---------------------------~~~~~~g~~l~~AdVGIAmg~gtdvAkeaADivL~ 802 (962)
|||..||.++|+++||-. +|+.++.++|.+||||||||.|||+|.|+|||||+
T Consensus 747 GDn~~aA~svA~~VGi~~V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig~gs~vAieaADIVLm 826 (951)
T KOG0207|consen 747 GDNDAAARSVAQQVGIDNVYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIGAGSDVAIEAADIVLM 826 (951)
T ss_pred CCCHHHHHHHHHhhCcceEEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeeccccHHHHhhCCEEEE
Confidence 999999999999999631 24456777889999999999999999999999999
Q ss_pred cCChhHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhCCCccchhH
Q psy886 803 DDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAALGLPEALIKK 856 (962)
Q Consensus 803 dd~f~~iv~ai~~gR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~ 856 (962)
.||+..++.+|+.+|+++.+||.|+.|++.||+..+ ++..+.|++++.-|.|.
T Consensus 827 rn~L~~v~~ai~LSrkt~~rIk~N~~~A~~yn~~~I-pIAagvF~P~~~~L~Pw 879 (951)
T KOG0207|consen 827 RNDLRDVPFAIDLSRKTVKRIKLNFVWALIYNLVGI-PIAAGVFAPFGIVLPPW 879 (951)
T ss_pred ccchhhhHHHHHHHHHHHhhHHHHHHHHHHHHHhhh-hhheecccCCccccCch
Confidence 999999999999999999999999999999997643 34444444444224443
No 23
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=8.1e-68 Score=655.04 Aligned_cols=533 Identities=20% Similarity=0.253 Sum_probs=418.5
Q ss_pred HHHhhhhhhccCccccCCCChhHHHHHHHHHHHHHHHHHHHHhhhcccccc-----c-c-ccchhHHHHHHHHHHHHHHH
Q psy886 41 RLRLRQIDFIPARVTSLSPSENVHIASTNFAVLFCLCPQVLALFEEHEDFN-----S-T-LTSFVEPFVILLILIANAIV 113 (962)
Q Consensus 41 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~-~~~~~~~~~i~~~~~~~~~~ 113 (962)
+++..++.++.++++++.++..++....+|++++++.+...+.++.+.... . . ..+|..+..+++++.+++++
T Consensus 223 ~~~~~~~~~~~g~~~~~~a~~~l~~~~~~md~l~~l~~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~l 302 (834)
T PRK10671 223 GLITLAVMVFAGGHFYRSAWKSLLNGSATMDTLVALGTGAAWLYSMSVNLWPQWFPMEARHLYYEASAMIIGLINLGHML 302 (834)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHHH
Confidence 455677888888899999999998888889999988888877766432110 0 0 12455578888899999999
Q ss_pred HHHHHHHHHHHHHHHhccCCCeEEEEECCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeecccccCCC
Q psy886 114 GVWQERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGES 193 (962)
Q Consensus 114 ~~~~~~~~~~~l~~l~~~~~~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lTGEs 193 (962)
+.+.+.|+++.+++|.++.|++++++|+|+ +++||.++|+|||+|.|++||+||+||+|++|++. ||||+|||||
T Consensus 303 e~~~~~~~~~~~~~L~~l~p~~a~~~~~~~--~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g~~~---vdeS~lTGEs 377 (834)
T PRK10671 303 EARARQRSSKALEKLLDLTPPTARVVTDEG--EKSVPLADVQPGMLLRLTTGDRVPVDGEITQGEAW---LDEAMLTGEP 377 (834)
T ss_pred HHHHHHHHHHHHHHHhccCCCEEEEEeCCc--EEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEceEE---EeehhhcCCC
Confidence 999999999999999999999999999998 79999999999999999999999999999976443 6666666666
Q ss_pred cceeecCCCCCCcccccCCCccccccCccccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCE
Q psy886 194 VSVIKHTDAVPDPRAEKNGPQMCENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDI 273 (962)
Q Consensus 194 ~Pv~k~~g~~~~~~~~~~~~~~~~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDI 273 (962)
.|+.|++|
T Consensus 378 ~pv~k~~g------------------------------------------------------------------------ 385 (834)
T PRK10671 378 IPQQKGEG------------------------------------------------------------------------ 385 (834)
T ss_pred CCEecCCC------------------------------------------------------------------------
Confidence 66555433
Q ss_pred EEeCCCCeecceEEEEeecCCeEEEEecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEeccch
Q psy886 274 VEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLNT 353 (962)
Q Consensus 274 V~l~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~T 353 (962)
+.+|+||.+.+|.+++.|+++|.+|
T Consensus 386 -------------------------------------------------------d~V~aGt~~~~G~~~~~v~~~g~~t 410 (834)
T PRK10671 386 -------------------------------------------------------DSVHAGTVVQDGSVLFRASAVGSHT 410 (834)
T ss_pred -------------------------------------------------------CEEEecceecceeEEEEEEEEcCcC
Confidence 4589999999999999999999999
Q ss_pred hhHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHhhcCCc
Q psy886 354 AIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVAAIPEG 433 (962)
Q Consensus 354 ~~gki~~~~~~~~~~~tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~ 433 (962)
.+|||.+++++++..++|+|+..++++.++.+++++++++.+++|+.. + .+ ..+.+.+..++++++++|||+
T Consensus 411 ~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~------~-~~-~~~~~~~~~a~~vlv~acPca 482 (834)
T PRK10671 411 TLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFF------G-PA-PQIVYTLVIATTVLIIACPCA 482 (834)
T ss_pred hHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------C-Cc-hHHHHHHHHHHHHHHHhcccc
Confidence 999999999999889999999999999999998888888777665321 1 11 012345778999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhhcCccCCchhhhhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcceEEEeCCccc
Q psy886 434 LPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYE 513 (962)
Q Consensus 434 Lp~~v~i~l~~~~~~m~k~~ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (962)
|++++++++..++.+++|+|+++|+.+++|+||+++++|||||||||+|+|+|.++...+..
T Consensus 483 L~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~------------------ 544 (834)
T PRK10671 483 LGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNGV------------------ 544 (834)
T ss_pred hhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEccCCC------------------
Confidence 99999999999999999999999999999999999999999999999999999987643210
Q ss_pred cCcceecCCCccCCCChHHHHHHHHHHhhccCCccccccccCceEEecChhHHHHHHHHHHcCCCCcccCCCchhhHHHh
Q psy886 514 PIGDVFLNGSKIKGADYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQAIA 593 (962)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~ 593 (962)
+...+. ..++++++. ..+|.+.|++.++.......
T Consensus 545 ---------------~~~~~l--~~a~~~e~~--------------s~hp~a~Ai~~~~~~~~~~~-------------- 579 (834)
T PRK10671 545 ---------------DEAQAL--RLAAALEQG--------------SSHPLARAILDKAGDMTLPQ-------------- 579 (834)
T ss_pred ---------------CHHHHH--HHHHHHhCC--------------CCCHHHHHHHHHHhhCCCCC--------------
Confidence 011122 222333322 35799999998775322100
Q ss_pred hhhHHhhhceeeEeecCCCCC-ceEEEEEecCCCCCCCCCCCEEEEeCChHHHHhcccccccCCeeeeCCHHHHHHHHHH
Q psy886 594 VRQDVETKWKKEFTLEFSRDR-KSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKFPLTATLKNRILDL 672 (962)
Q Consensus 594 ~~~~~~~~~~~~~~~pF~s~r-k~msvv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~ 672 (962)
.. +|.... +-+...+ + + ..+.+|+++.+.+.. .. ++.+.+.
T Consensus 580 -----~~--------~~~~~~g~Gv~~~~--~--------g-~~~~~G~~~~~~~~~-----------~~---~~~~~~~ 621 (834)
T PRK10671 580 -----VN--------GFRTLRGLGVSGEA--E--------G-HALLLGNQALLNEQQ-----------VD---TKALEAE 621 (834)
T ss_pred -----cc--------cceEecceEEEEEE--C--------C-EEEEEeCHHHHHHcC-----------CC---hHHHHHH
Confidence 00 111111 1122111 1 1 245679988764321 11 1123333
Q ss_pred HHHHhcccchhheeeEEeeeCCCCccccccccccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEcCCC
Q psy886 673 TRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDN 752 (962)
Q Consensus 673 ~~~~~~~~~glRvl~~A~~~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~ 752 (962)
.+++. .+|.+++.+|+ |..++|++++.|++||+++++|++|++.|++++|+|||+
T Consensus 622 ~~~~~--~~g~~~v~va~-----------------------~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~ 676 (834)
T PRK10671 622 ITAQA--SQGATPVLLAV-----------------------DGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDN 676 (834)
T ss_pred HHHHH--hCCCeEEEEEE-----------------------CCEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCC
Confidence 44443 67888887773 346899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCC---------------------------CCccccCCCCCcCcEEEeccChhHHHHhhcccccccCC
Q psy886 753 KATAEAICRRIGVFT---------------------------EEEDTTGKSYSKAEIGIAMGSGTAVAKSASEMVLADDN 805 (962)
Q Consensus 753 ~~TA~~IA~~~GI~~---------------------------~~~~~~g~~l~~AdVGIAmg~gtdvAkeaADivL~dd~ 805 (962)
..+|.++|+++||.. +|+.++.+.+++||+|||||+|+|.++++||+++++|+
T Consensus 677 ~~~a~~ia~~lgi~~~~~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~a~~~ad~vl~~~~ 756 (834)
T PRK10671 677 PTTANAIAKEAGIDEVIAGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETAAITLMRHS 756 (834)
T ss_pred HHHHHHHHHHcCCCEEEeCCCHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHHHHHhCCEEEecCC
Confidence 999999999999943 01112333457999999999999999999999999999
Q ss_pred hhHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHH
Q psy886 806 FSSIVAAVEEGRAIYNNMKQFIRYLISSNIGEVV 839 (962)
Q Consensus 806 f~~iv~ai~~gR~i~~ni~k~i~~~l~~ni~~~~ 839 (962)
+..|.+++++||++++||++|+.|.+.||+..+.
T Consensus 757 ~~~i~~~i~l~r~~~~~i~~Nl~~a~~yn~~~i~ 790 (834)
T PRK10671 757 LMGVADALAISRATLRNMKQNLLGAFIYNSLGIP 790 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999976543
No 24
>KOG0208|consensus
Probab=100.00 E-value=2.7e-68 Score=606.90 Aligned_cols=670 Identities=21% Similarity=0.271 Sum_probs=466.2
Q ss_pred HHHHhhhhhhccCccccCCCChhHHHH--HHHHHHHHHHHHHHHHhhhccccccccccchhHHHHHHHHHHHHHHHHHHH
Q psy886 40 CRLRLRQIDFIPARVTSLSPSENVHIA--STNFAVLFCLCPQVLALFEEHEDFNSTLTSFVEPFVILLILIANAIVGVWQ 117 (962)
Q Consensus 40 ~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 117 (962)
+....+...||.|.+..+.+....... ..++.+++.++++++|.... +++.++.|+++..++.++..|+
T Consensus 164 ~~~~~r~~iyG~N~i~l~ik~i~~iLv~EvL~PfYlFQ~fSv~lW~~d~---------Y~~YA~cI~iisv~Si~~sv~e 234 (1140)
T KOG0208|consen 164 QEIIDRRIIYGRNVISLPIKSISQILVKEVLNPFYLFQAFSVALWLADS---------YYYYAFCIVIISVYSIVLSVYE 234 (1140)
T ss_pred HHHHhHHhhcCCceeeeecccHHHHHHHhccchHHHHHhHHhhhhhccc---------chhhhhHHHHHHHHHHHHHHHH
Confidence 346677888999999877765544433 78999999999999986543 3566788888888899999999
Q ss_pred HHHHHHHHHHHhccCCCeEEEEECCCccEEEEeCCCCCCCCEEEEcC-CCccCCCceEEeeecceeeeecccccCCCcce
Q psy886 118 ERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSV-GDKIPADIRLIKIYSTTIRIDQSILTGESVSV 196 (962)
Q Consensus 118 ~~~~~~~l~~l~~~~~~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~-G~~iP~Dg~v~~G~~~~~~vdes~lTGEs~Pv 196 (962)
.++.++.++++.+. +..++|+|+|. |++|+++||+|||++.+.+ |-..|||++|++ ++|.||||||||||+||
T Consensus 235 ~r~qs~rlr~mv~~-~~~V~V~R~g~--~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~---g~civNEsmLTGESVPv 308 (1140)
T KOG0208|consen 235 TRKQSIRLRSMVKF-TCPVTVIRDGF--WETVDSSELVPGDILYIPPPGKIMPCDALLIS---GDCIVNESMLTGESVPV 308 (1140)
T ss_pred HHHHHHHHHHHhcC-CceEEEEECCE--EEEEeccccccccEEEECCCCeEeecceEEEe---CcEEeecccccCCcccc
Confidence 99999999988875 46899999987 8999999999999999988 889999999995 55669999999999999
Q ss_pred eecCCCCCCcccccCCCccccccCccccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEEEe
Q psy886 197 IKHTDAVPDPRAEKNGPQMCENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEV 276 (962)
Q Consensus 197 ~k~~g~~~~~~~~~~~~~~~~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l 276 (962)
.|.+.... .
T Consensus 309 ~K~~l~~~--~--------------------------------------------------------------------- 317 (1140)
T KOG0208|consen 309 TKTPLPMG--T--------------------------------------------------------------------- 317 (1140)
T ss_pred cccCCccc--c---------------------------------------------------------------------
Confidence 99765300 0
Q ss_pred CCCCeecceEEEEeecCCeEEEEecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeee------ceEEEEEEEec
Q psy886 277 SVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAA------GKARGIVMGTG 350 (962)
Q Consensus 277 ~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~------G~~~~vV~~tG 350 (962)
++..+. .. .....++|.+|.||.+.+ +.+.++|++||
T Consensus 318 ----------------------------~~~~~~-~~--------~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTG 360 (1140)
T KOG0208|consen 318 ----------------------------DSLDSI-TI--------SMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTG 360 (1140)
T ss_pred ----------------------------ccCcCe-ee--------chhhcCcceeeccceEEEeecCCCCceEEEEEecc
Confidence 000000 00 011234689999999965 45899999999
Q ss_pred cchhhHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHhhc
Q psy886 351 LNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVAAI 430 (962)
Q Consensus 351 ~~T~~gki~~~~~~~~~~~tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~i 430 (962)
..|..|++.+++-.++.....+-+..-++...+ .++.++.+++.+.. +. ..+.+. -..++.++.++...+
T Consensus 361 F~T~KGqLVRsilyPkP~~fkfyrds~~fi~~l--~~ia~~gfiy~~i~--l~--~~g~~~----~~iiirsLDliTi~V 430 (1140)
T KOG0208|consen 361 FSTTKGQLVRSILYPKPVNFKFYRDSFKFILFL--VIIALIGFIYTAIV--LN--LLGVPL----KTIIIRSLDLITIVV 430 (1140)
T ss_pred ccccccHHHHhhcCCCCcccHHHHHHHHHHHHH--HHHHHHHHHHHhHh--HH--HcCCCH----HHHhhhhhcEEEEec
Confidence 999999999999887654444444443333322 22222222221111 10 112121 236788999999999
Q ss_pred CCchHHHHHHHHHHHHHHHhhhcCccCCchhhhhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcceEEEeCC
Q psy886 431 PEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGS 510 (962)
Q Consensus 431 P~~Lp~~v~i~l~~~~~~m~k~~ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~ 510 (962)
|++||+++++...++..|+.|+|++|-++..+...|+++++|||||||||++.+.+-.+................. ..
T Consensus 431 PPALPAaltvG~~~a~~RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~--~~ 508 (1140)
T KOG0208|consen 431 PPALPAALTVGIIYAQSRLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVT--ED 508 (1140)
T ss_pred CCCchhhhhHHHHHHHHHHHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhh--hh
Confidence 9999999999999999999999999999999999999999999999999999999988876432110000000000 00
Q ss_pred ccccCcceecCCCccCCCChHHHHHHHHHHhhccCCccccccccCceEEecChhHHHHHHHHHHcCCC------------
Q psy886 511 TYEPIGDVFLNGSKIKGADYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPF------------ 578 (962)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~~g~~------------ 578 (962)
+.+..-+...++. ......+..+++.||......+ ...|||.|.-+.+...-.-..
T Consensus 509 ~~~~~~~l~~~~~------~~~~~~~~~a~atCHSL~~v~g------~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~ 576 (1140)
T KOG0208|consen 509 SLQLFYKLSLRSS------SLPMGNLVAAMATCHSLTLVDG------TLVGDPLDLKMFESTGWVYEEADIEDEATREFN 576 (1140)
T ss_pred hccceeecccccc------CCchHHHHHHHhhhceeEEeCC------eeccCceeeeeeeccceEEEeccccchhhhhhC
Confidence 0000000000000 0113356677889996554322 245677665444322110000
Q ss_pred CcccCCCchhhHH-HhhhhHHhhhceeeEeecCCCCCceEEEEEecCCCCCCCCCCCEEEEeCChHHHHhcccccccCCe
Q psy886 579 NVSKSGLGRREQA-IAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQ 657 (962)
Q Consensus 579 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~~~ 657 (962)
.....-+...+.. ....+.....+.++..+||+|.-+||||++..++. ...++|+|||||.|.+.|++...
T Consensus 577 ~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e-----~~~~~ftKGaPE~I~~ic~p~tv--- 648 (1140)
T KOG0208|consen 577 TLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMSVIVSTGGE-----DKMMVFTKGAPESIAEICKPETV--- 648 (1140)
T ss_pred CccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEEEEEecCCC-----CceEeeccCCHHHHHHhcCcccC---
Confidence 0000000000000 00000112257889999999999999999997643 27899999999999999986422
Q ss_pred eeeCCHHHHHHHHHHHHHHhcccchhheeeEEeeeCCCCccccccccccccccccCCeEEEEEecccCCCCccHHHHHHH
Q psy886 658 KFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIAR 737 (962)
Q Consensus 658 ~~~l~~~~~~~i~~~~~~~~~~~~glRvl~~A~~~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~ 737 (962)
...+++..++|+ .+|+|++|+|+|+++.. .........++.+|+||+|+|++.||+++|++.+++|++
T Consensus 649 --------P~dy~evl~~Yt--~~GfRVIAlA~K~L~~~--~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~e 716 (1140)
T KOG0208|consen 649 --------PADYQEVLKEYT--HQGFRVIALASKELETS--TLQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDE 716 (1140)
T ss_pred --------CccHHHHHHHHH--hCCeEEEEEecCccCcc--hHHHHhhccHhhhhccceeeEEEEeecccccccHHHHHH
Confidence 234566777885 89999999999998754 122223345678899999999999999999999999999
Q ss_pred HHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCcc----------------------------------------------
Q psy886 738 CRAAGIRVIVITGDNKATAEAICRRIGVFTEEED---------------------------------------------- 771 (962)
Q Consensus 738 l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~~~~---------------------------------------------- 771 (962)
|++|.||++|+||||..||+.+||+||++.+...
T Consensus 717 L~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d 796 (1140)
T KOG0208|consen 717 LNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLD 796 (1140)
T ss_pred HHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChh
Confidence 9999999999999999999999999999754210
Q ss_pred ----------ccCCCC--------------------------------------------------------CcCcEEEe
Q psy886 772 ----------TTGKSY--------------------------------------------------------SKAEIGIA 785 (962)
Q Consensus 772 ----------~~g~~l--------------------------------------------------------~~AdVGIA 785 (962)
++|+.+ ++|||||+
T Consensus 797 ~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~VgfCGDGANDCgALKaAdvGIS 876 (1140)
T KOG0208|consen 797 VLSEKDYHLAMSGKTFQVILEHFPELVPKILLKGTVFARMSPDQKAELIEALQKLGYKVGFCGDGANDCGALKAADVGIS 876 (1140)
T ss_pred hhccceeEEEecCchhHHHHhhcHHHHHHHHhcCeEEeecCchhHHHHHHHHHhcCcEEEecCCCcchhhhhhhcccCcc
Confidence 001100 38999999
Q ss_pred cc-ChhHHHHhhcccccccCChhHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhCCCccchhHH-H-----
Q psy886 786 MG-SGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAALGLPEALIKKI-S----- 858 (962)
Q Consensus 786 mg-~gtdvAkeaADivL~dd~f~~iv~ai~~gR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~q-L----- 858 (962)
.+ .. |.-||...---.+.+.+++.|+|||...-.=-..++|...|.+.+.+.+++...- ..-|+-.| |
T Consensus 877 LSeaE---ASvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs~iqFisv~~LY~~--~~nl~D~Qfl~iDLl 951 (1140)
T KOG0208|consen 877 LSEAE---ASVAAPFTSKTPSISCVPDVIREGRAALVTSFACFKYMALYSAIQFISVVFLYLI--NSNLGDLQFLFIDLL 951 (1140)
T ss_pred hhhhh---HhhcCccccCCCchhhHhHHHhhhhhhhhhhHHHHHHHHHHHHHHHHhhheeeee--cccccchhhhhhHHH
Confidence 97 32 3344555555568999999999999999999999999988887766554432222 23344455 3
Q ss_pred --------hhCcccccccccCCCCcCccchh
Q psy886 859 --------TTNRGKKKKLSYNFLDISLLGPA 881 (962)
Q Consensus 859 --------~~d~~~a~al~~e~~~~~~m~~p 881 (962)
....-|+--|+--||...++..+
T Consensus 952 ii~pia~~m~~~~a~~~L~~~rP~~~L~s~~ 982 (1140)
T KOG0208|consen 952 IITPIAVMMSRFDASDKLFPKRPPTNLLSKK 982 (1140)
T ss_pred HHHHHHHHHccCcHHHHhcCCCCCccccccc
Confidence 33344566666677777777776
No 25
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=1.7e-67 Score=622.48 Aligned_cols=508 Identities=22% Similarity=0.318 Sum_probs=393.2
Q ss_pred cccCCCChhHHHHHHHHHHHHHHHHHHHHhhhccccccc-------cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy886 54 VTSLSPSENVHIASTNFAVLFCLCPQVLALFEEHEDFNS-------TLTSFVEPFVILLILIANAIVGVWQERNAESAIE 126 (962)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~ 126 (962)
+++++++..++.+..+|++++++..+..+.++.+....+ ...+|..+.++++++.++++++.+.++|+++.++
T Consensus 4 ~~~~~a~~~l~~~~~~md~l~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~ 83 (562)
T TIGR01511 4 PFYKSAWKALRHKAPNMDTLIALGTTVAYGYSLVALLANQVLTGLHVHTFFDASAMLITFILLGRWLEMLAKGRASDALS 83 (562)
T ss_pred HHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555555555556677777776666666554432211 1235666677788899999999999999999999
Q ss_pred HHhccCCCeEEEEECCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeecccccCCCcceeecCCCCCCc
Q psy886 127 ALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDP 206 (962)
Q Consensus 127 ~l~~~~~~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lTGEs~Pv~k~~g~~~~~ 206 (962)
+|.++.|++++++|+++. +++||+++|+|||+|.|++||+|||||+|++|++. ||||+|||||.|+.|++|
T Consensus 84 ~L~~~~p~~a~~~~~~~~-~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~g~~~---vdes~lTGEs~pv~k~~g----- 154 (562)
T TIGR01511 84 KLAKLQPSTATLLTKDGS-IEEVPVALLQPGDIVKVLPGEKIPVDGTVIEGESE---VDESLVTGESLPVPKKVG----- 154 (562)
T ss_pred HHHhcCCCEEEEEECCCe-EEEEEHHHCCCCCEEEECCCCEecCceEEEECceE---EehHhhcCCCCcEEcCCC-----
Confidence 999999999999997552 68999999999999999999999999999976443 666666665555555322
Q ss_pred ccccCCCccccccCccccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEEEeCCCCeecceE
Q psy886 207 RAEKNGPQMCENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADI 286 (962)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~ 286 (962)
T Consensus 155 -------------------------------------------------------------------------------- 154 (562)
T TIGR01511 155 -------------------------------------------------------------------------------- 154 (562)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEeecCCeEEEEecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEeccchhhHHHHhhccccc
Q psy886 287 RLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLNTAIGKIRTEMSETE 366 (962)
Q Consensus 287 ~ll~~~~~~l~VdeS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~T~~gki~~~~~~~~ 366 (962)
+.+|+||.+.+|.+++.|+++|.+|.+|||.+++.+++
T Consensus 155 ------------------------------------------d~V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~ 192 (562)
T TIGR01511 155 ------------------------------------------DPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQ 192 (562)
T ss_pred ------------------------------------------CEEEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHH
Confidence 45899999999999999999999999999999999999
Q ss_pred cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHH
Q psy886 367 EIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGT 446 (962)
Q Consensus 367 ~~~tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~Lp~~v~i~l~~~~ 446 (962)
.+++|+|+..+++++++.+++++++++.+++|. ..+..++++++++|||+|++++++++..+.
T Consensus 193 ~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~~-----------------~~~~~~~svlvvacPcaL~la~p~a~~~~~ 255 (562)
T TIGR01511 193 QSKAPIQRLADKVAGYFVPVVIAIALITFVIWL-----------------FALEFAVTVLIIACPCALGLATPTVIAVAT 255 (562)
T ss_pred hcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHhccchhhhHHHHHHHHHH
Confidence 999999999999999999988888877766542 247789999999999999999999999999
Q ss_pred HHHhhhcCccCCchhhhhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcceEEEeCCccccCcceecCCCccC
Q psy886 447 RRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKIK 526 (962)
Q Consensus 447 ~~m~k~~ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (962)
.+++|+|+++|+..++|+|+++++||||||||||+|+|+|.++...+..
T Consensus 256 ~~aa~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~------------------------------- 304 (562)
T TIGR01511 256 GLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVFGDR------------------------------- 304 (562)
T ss_pred HHHHHCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEecCCCC-------------------------------
Confidence 9999999999999999999999999999999999999999998653310
Q ss_pred CCChHHHHHHHHHHhhccCCccccccccCceEEecChhHHHHHHHHHHcCCCCcccCCCchhhHHHhhhhHHhhhceeeE
Q psy886 527 GADYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQAIAVRQDVETKWKKEF 606 (962)
Q Consensus 527 ~~~~~~l~~~~~~~~lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 606 (962)
+.+.+..+ +.+++.. ..+|.+.|++.++++.+..... .....
T Consensus 305 --~~~~~l~~--aa~~e~~--------------s~HPia~Ai~~~~~~~~~~~~~--------------------~~~~~ 346 (562)
T TIGR01511 305 --DRTELLAL--AAALEAG--------------SEHPLAKAIVSYAKEKGITLVE--------------------VSDFK 346 (562)
T ss_pred --CHHHHHHH--HHHHhcc--------------CCChHHHHHHHHHHhcCCCcCC--------------------CCCeE
Confidence 01222222 2223221 3579999999998876532110 00011
Q ss_pred eecCCCCCceEEEEEecCCCCCCCCCCCEEEEeCChHHHHhcccccccCCeeeeCCHHHHHHHHHHHHHHhcccchhhee
Q psy886 607 TLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCL 686 (962)
Q Consensus 607 ~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~glRvl 686 (962)
++| .+.+...+. + .-+..|+++.+.+.. . .+++ + ..+|.+++
T Consensus 347 ~~~----g~Gi~~~~~----------g-~~~~iG~~~~~~~~~-------~--~~~~------------~--~~~g~~~~ 388 (562)
T TIGR01511 347 AIP----GIGVEGTVE----------G-TKIQLGNEKLLGENA-------I--KIDG------------K--AEQGSTSV 388 (562)
T ss_pred EEC----CceEEEEEC----------C-EEEEEECHHHHHhCC-------C--CCCh------------h--hhCCCEEE
Confidence 111 222222221 1 234567766543211 0 0110 1 13455554
Q ss_pred eEEeeeCCCCccccccccccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 687 GLATADNPLKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 687 ~~A~~~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
.++ .|.+++|+++++|++|||++++|++||+.|++++|+|||+..+|..+|+++||.
T Consensus 389 ~~~-----------------------~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~ 445 (562)
T TIGR01511 389 LVA-----------------------VNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN 445 (562)
T ss_pred EEE-----------------------ECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc
Confidence 443 577899999999999999999999999999999999999999999999999983
Q ss_pred C--------------------------CCccccCCCCCcCcEEEeccChhHHHHhhcccccccCChhHHHHHHHHhHHHH
Q psy886 767 T--------------------------EEEDTTGKSYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIY 820 (962)
Q Consensus 767 ~--------------------------~~~~~~g~~l~~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~ai~~gR~i~ 820 (962)
- +|+..+.+.+++|||||+||.|+++++++||+++++|++..|++++++||+++
T Consensus 446 ~~~~~~p~~K~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~ 525 (562)
T TIGR01511 446 VRAEVLPDDKAALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIGAGTDVAIEAADVVLMRNDLNDVATAIDLSRKTL 525 (562)
T ss_pred EEccCChHHHHHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeCCcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHH
Confidence 1 01122333457999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhHHHHH
Q psy886 821 NNMKQFIRYLISSNIGEVV 839 (962)
Q Consensus 821 ~ni~k~i~~~l~~ni~~~~ 839 (962)
+||++|+.|++.+|+..+.
T Consensus 526 ~~i~qn~~~a~~~n~~~i~ 544 (562)
T TIGR01511 526 RRIKQNLLWAFGYNVIAIP 544 (562)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999986543
No 26
>KOG0205|consensus
Probab=100.00 E-value=6.9e-69 Score=584.77 Aligned_cols=589 Identities=26% Similarity=0.392 Sum_probs=432.1
Q ss_pred HHHhhhhhhccCccccCCCChhHHHHHH--HH----HHHHHHHHHHHHhhhccccccccccchhHHHHHHHHHHHHHHHH
Q psy886 41 RLRLRQIDFIPARVTSLSPSENVHIAST--NF----AVLFCLCPQVLALFEEHEDFNSTLTSFVEPFVILLILIANAIVG 114 (962)
Q Consensus 41 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 114 (962)
.+..+...||+|++..++.+..+++.+. ++ .-.+++.++.+. .. .+....|.+...|..++++|..++
T Consensus 41 E~~eRlk~fG~NkleEkken~~lKFl~Fm~~PlswVMEaAAimA~~La--ng----~~~~~DW~DF~gI~~LLliNsti~ 114 (942)
T KOG0205|consen 41 EVEERLKIFGPNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIGLA--NG----GGRPPDWQDFVGICCLLLINSTIS 114 (942)
T ss_pred HHHHHHHhhCchhhhhhhhhHHHHHHHHHhchHHHHHHHHHHHHHHHh--cC----CCCCcchhhhhhhheeeeecceee
Confidence 4667888999999999998888888732 22 222222222221 11 122336888899999999999888
Q ss_pred HHHHHHHHHHHHHHhccCCCeEEEEECCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeecccccCCCc
Q psy886 115 VWQERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESV 194 (962)
Q Consensus 115 ~~~~~~~~~~l~~l~~~~~~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lTGEs~ 194 (962)
+.+|+++.++..+|++-...++.|+|||+ |.+
T Consensus 115 FveE~nAGn~aa~L~a~LA~KakVlRDGk--w~E---------------------------------------------- 146 (942)
T KOG0205|consen 115 FIEENNAGNAAAALMAGLAPKAKVLRDGK--WSE---------------------------------------------- 146 (942)
T ss_pred eeeccccchHHHHHHhccCcccEEeecCe--eee----------------------------------------------
Confidence 88888887777777776666666777666 444
Q ss_pred ceeecCCCCCCcccccCCCccccccCccccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEE
Q psy886 195 SVIKHTDAVPDPRAEKNGPQMCENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIV 274 (962)
Q Consensus 195 Pv~k~~g~~~~~~~~~~~~~~~~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV 274 (962)
+.+++||||||+
T Consensus 147 --------------------------------------------------------------------~eAs~lVPGDIl 158 (942)
T KOG0205|consen 147 --------------------------------------------------------------------QEASILVPGDIL 158 (942)
T ss_pred --------------------------------------------------------------------eeccccccCcee
Confidence 445555555555
Q ss_pred EeCCCCeecceEEEEeecCCeEEEEecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEeccchh
Q psy886 275 EVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLNTA 354 (962)
Q Consensus 275 ~l~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~T~ 354 (962)
.++.||.||||+||+++ .-++||+|+|||||.|+.|+++ +-+|+||+|.+|++.+||++||.+|.
T Consensus 159 sik~GdIiPaDaRLl~g--D~LkiDQSAlTGESLpvtKh~g-------------d~vfSgSTcKqGE~eaVViATg~~TF 223 (942)
T KOG0205|consen 159 SIKLGDIIPADARLLEG--DPLKIDQSALTGESLPVTKHPG-------------DEVFSGSTCKQGEIEAVVIATGVHTF 223 (942)
T ss_pred eeccCCEecCccceecC--CccccchhhhcCCccccccCCC-------------CceecccccccceEEEEEEEecccee
Confidence 55555555555555543 3678999999999999999985 56999999999999999999999999
Q ss_pred hHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHhhcCCch
Q psy886 355 IGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVAAIPEGL 434 (962)
Q Consensus 355 ~gki~~~~~~~~~~~tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~L 434 (962)
.||-+.++.. ......+|+-++.++.++...+++-.++.+.+.+.. ....++...+ ..+.+++..||.+|
T Consensus 224 ~GkAA~LVds-t~~~GHFqkVLt~IGn~ci~si~~g~lie~~vmy~~------q~R~~r~~i~---nLlvllIGgiPiam 293 (942)
T KOG0205|consen 224 FGKAAHLVDS-TNQVGHFQKVLTGIGNFCICSIALGMLIEITVMYPI------QHRLYRDGID---NLLVLLIGGIPIAM 293 (942)
T ss_pred ehhhHHhhcC-CCCcccHHHHHHhhhhHHHHHHHHHHHHHHHhhhhh------hhhhhhhhhh---heheeeeccccccc
Confidence 9999999877 566788999999988876554332222222221111 0111111111 22334445599999
Q ss_pred HHHHHHHHHHHHHHHhhhcCccCCchhhhhcCCeeEEEecCCCcccCCceEEEE--E-EEeccccCCCCCcceEEEeCCc
Q psy886 435 PAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSR--M-FIFDKIEGSDSSFLEFEITGST 511 (962)
Q Consensus 435 p~~v~i~l~~~~~~m~k~~ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~--~-~~~~~~~~~~~~~~~~~~~~~~ 511 (962)
|.+++++++.|+.|++++|++++++.++|+|+.++++|+|||||||.|+++|.+ + ++..+
T Consensus 294 PtVlsvTMAiGs~rLaqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~g----------------- 356 (942)
T KOG0205|consen 294 PTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKG----------------- 356 (942)
T ss_pred ceeeeehhhHHHHHHHhcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceeeecC-----------------
Confidence 999999999999999999999999999999999999999999999999999876 2 11111
Q ss_pred cccCcceecCCCccCCCChHHHHHHHHHHhhccCCccccccccCceEEecChhHHHHHHHHHHcCCCCcccCCCchhhHH
Q psy886 512 YEPIGDVFLNGSKIKGADYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQA 591 (962)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~ 591 (962)
.+.+.+.-+ .|-.+..+ .-|..|.|++...+.
T Consensus 357 ----------------v~~D~~~L~-----A~rAsr~e----------n~DAID~A~v~~L~d----------------- 388 (942)
T KOG0205|consen 357 ----------------VDKDDVLLT-----AARASRKE----------NQDAIDAAIVGMLAD----------------- 388 (942)
T ss_pred ----------------CChHHHHHH-----HHHHhhhc----------ChhhHHHHHHHhhcC-----------------
Confidence 111222111 11111111 236677787765431
Q ss_pred HhhhhHHhhhceeeEeecCCCCCceEEEEEecCCCCCCCCCCCEEEEeCChHHHHhcccccccCCeeeeCCHHHHHHHHH
Q psy886 592 IAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKFPLTATLKNRILD 671 (962)
Q Consensus 592 ~~~~~~~~~~~~~~~~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~~~~~~l~~~~~~~i~~ 671 (962)
.+..+..|+.++-+||++..||.+..+.++++ +..-.+|||||.|++.|+. +.+.++++.+
T Consensus 389 ---PKeara~ikevhF~PFnPV~Krta~ty~d~dG------~~~r~sKGAPeqil~l~~~----------~~~i~~~vh~ 449 (942)
T KOG0205|consen 389 ---PKEARAGIKEVHFLPFNPVDKRTALTYIDPDG------NWHRVSKGAPEQILKLCNE----------DHDIPERVHS 449 (942)
T ss_pred ---HHHHhhCceEEeeccCCccccceEEEEECCCC------CEEEecCCChHHHHHHhhc----------cCcchHHHHH
Confidence 12256778999999999999999988876543 5677899999999999973 4466788889
Q ss_pred HHHHHhcccchhheeeEEeeeCCCCccccccccccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEcCC
Q psy886 672 LTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGD 751 (962)
Q Consensus 672 ~~~~~~~~~~glRvl~~A~~~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD 751 (962)
.+++|+ ++|+|-|++|++..+....+. -.....|+|+.-+-||||.+..++|++...-|++|.|+|||
T Consensus 450 ~id~~A--eRGlRSLgVArq~v~e~~~~~----------~g~pw~~~gllp~fdpprhdsa~tirral~lGv~Vkmitgd 517 (942)
T KOG0205|consen 450 IIDKFA--ERGLRSLAVARQEVPEKTKES----------PGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGD 517 (942)
T ss_pred HHHHHH--HhcchhhhhhhhccccccccC----------CCCCcccccccccCCCCccchHHHHHHHHhccceeeeecch
Confidence 999996 999999999998776443211 13567899999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHcCCCC---------------------------------------------------------CCccccC
Q psy886 752 NKATAEAICRRIGVFT---------------------------------------------------------EEEDTTG 774 (962)
Q Consensus 752 ~~~TA~~IA~~~GI~~---------------------------------------------------------~~~~~~g 774 (962)
...-|+..++++|+-. +|++.++
T Consensus 518 qlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie~adgfAgVfpehKy~iV~~Lq~r~hi~gmtgdgvnda 597 (942)
T KOG0205|consen 518 QLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIEKADGFAGVFPEHKYEIVKILQERKHIVGMTGDGVNDA 597 (942)
T ss_pred HHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhhhccCccccCHHHHHHHHHHHhhcCceecccCCCcccc
Confidence 9999999999998721 1112233
Q ss_pred CCCCcCcEEEeccChhHHHHhhcccccccCChhHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHH-HHHHHHHhCCCccc
Q psy886 775 KSYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNIGEVV-SIFLTAALGLPEAL 853 (962)
Q Consensus 775 ~~l~~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~ai~~gR~i~~ni~k~i~~~l~~ni~~~~-~~~~~~~~~~~~pl 853 (962)
+++++||+|||+...||+|+.||||||++..++.|+.|+.-+|.+|++++.+..|.++..+-.++ .++++.++.+ -|
T Consensus 598 paLKkAdigiava~atdaar~asdiVltepglSviI~avltSraIfqrmknytiyavsitiriv~gfml~alIw~~--df 675 (942)
T KOG0205|consen 598 PALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIALIWEF--DF 675 (942)
T ss_pred hhhcccccceeeccchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHhhheeeeehhHHHHHHHHHHHHHHHHh--cC
Confidence 45579999999999999999999999999999999999999999999999999999887766442 2333444433 34
Q ss_pred hhHH-H---hhCcccccccccCCCC
Q psy886 854 IKKI-S---TTNRGKKKKLSYNFLD 874 (962)
Q Consensus 854 ~~~q-L---~~d~~~a~al~~e~~~ 874 (962)
+|.. | +.+--+-++.+.+...
T Consensus 676 ~pfmvliiailnd~t~mtis~d~v~ 700 (942)
T KOG0205|consen 676 SPFMVLIIAILNDGTIMTISKDRVK 700 (942)
T ss_pred CHHHHHHHHHhcCCceEEEEcccCC
Confidence 4444 2 6666677777776544
No 27
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=3.7e-67 Score=616.80 Aligned_cols=452 Identities=39% Similarity=0.531 Sum_probs=382.6
Q ss_pred ccccch--hHHHHhHHHHHHHHHh--cCCccceeeeCCccceeeecccccCCCCEEEeCCCCeecceEEEEeecCCeEEE
Q psy886 223 HKCGRM--VQLERNAESAIEALKE--YEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRI 298 (962)
Q Consensus 223 ~~~gr~--~~~e~ra~~~l~~L~~--~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~V 298 (962)
.+++++ .+.++++++.+++|++ +.|++++|+|+| +++|++++|+|||+|.+++||+|||||++++ +.+.|
T Consensus 6 ~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g---~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~---g~~~v 79 (499)
T TIGR01494 6 VLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG---WKEIPASDLVPGDIVLVKSGEIVPADGVLLS---GSCFV 79 (499)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC---eEEEEHHHCCCCCEEEECCCCEeeeeEEEEE---ccEEE
Confidence 345565 6789999999999999 899999999988 6899999999999999999999999999996 47899
Q ss_pred EecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEeccchhhHHHHhhccccccCCCchHHHHHH
Q psy886 299 DQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLNTAIGKIRTEMSETEEIKTPLQQKLDE 378 (962)
Q Consensus 299 deS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~T~~gki~~~~~~~~~~~tplq~~l~~ 378 (962)
|||+|||||.|+.|.++ +.+++||.+.+|+.++.|+++|.+|..+++...+......++|++++.++
T Consensus 80 des~LTGEs~pv~k~~g-------------~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~ 146 (499)
T TIGR01494 80 DESNLTGESVPVLKTAG-------------DAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDR 146 (499)
T ss_pred EcccccCCCCCeeeccC-------------CccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHH
Confidence 99999999999999874 67899999999999999999999999999999998888879999999999
Q ss_pred HH-HHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhhhcCccC
Q psy886 379 FG-EQLSKVISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVR 457 (962)
Q Consensus 379 ~~-~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~Lp~~v~i~l~~~~~~m~k~~ilvr 457 (962)
+. .++.++++++++++++++...+.. ..+| ...+..++++++++|||+||+++++++..+..+|+++|+++|
T Consensus 147 ~~~~~~~~~~~~la~~~~~~~~~~~~~---~~~~----~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk 219 (499)
T TIGR01494 147 LSDIIFILFVLLIALAVFLFWAIGLWD---PNSI----FKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVR 219 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcc---cccH----HHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEe
Confidence 99 677777777666666554322110 0013 346888999999999999999999999999999999999999
Q ss_pred CchhhhhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcceEEEeCCccccCcceecCCCccCCCChHHHHHHH
Q psy886 458 SLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKIKGADYETLHELG 537 (962)
Q Consensus 458 ~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 537 (962)
+++++|+||+++++|||||||||+|+|+|.+++..+.
T Consensus 220 ~~~~lE~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~------------------------------------------- 256 (499)
T TIGR01494 220 SLNALEELGKVDYICSDKTGTLTKNEMSFKKVSVLGG------------------------------------------- 256 (499)
T ss_pred chhhhhhccCCcEEEeeCCCccccCceEEEEEEecCC-------------------------------------------
Confidence 9999999999999999999999999999999865321
Q ss_pred HHHhhccCCccccccccCceEEecChhHHHHHHHHHHcCCCCcccCCCchhhHHHhhhhHHhhhceeeEeecCCCCCceE
Q psy886 538 TICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQAIAVRQDVETKWKKEFTLEFSRDRKSM 617 (962)
Q Consensus 538 ~~~~lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~m 617 (962)
.+..++|.|.|++.++++. .....||++.+|+|
T Consensus 257 -------------------~~~s~hp~~~ai~~~~~~~----------------------------~~~~~~f~~~~~~~ 289 (499)
T TIGR01494 257 -------------------EYLSGHPDERALVKSAKWK----------------------------ILNVFEFSSVRKRM 289 (499)
T ss_pred -------------------CcCCCChHHHHHHHHhhhc----------------------------CcceeccCCCCceE
Confidence 0124689999999877531 12357999999999
Q ss_pred EEEEecCCCCCCCCCCCEEEEeCChHHHHhcccccccCCeeeeCCHHHHHHHHHHHHHHhcccchhheeeEEeeeCCCCc
Q psy886 618 SSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKP 697 (962)
Q Consensus 618 svv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~glRvl~~A~~~~~~~~ 697 (962)
+++++..+ + .|+||+++.++++|.+. .+..++++ .+|+|++++|++.
T Consensus 290 ~~~~~~~~-------~--~~~~G~~~~i~~~~~~~-----------------~~~~~~~~--~~g~~~~~~a~~~----- 336 (499)
T TIGR01494 290 SVIVRGPD-------G--TYVKGAPEFVLSRVKDL-----------------EEKVKELA--QSGLRVLAVASKE----- 336 (499)
T ss_pred EEEEecCC-------c--EEEeCCHHHHHHhhHHH-----------------HHHHHHHH--hCCCEEEEEEECC-----
Confidence 99987521 2 47899999999988531 11223343 6899999999642
Q ss_pred cccccccccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCC---------
Q psy886 698 EDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTE--------- 768 (962)
Q Consensus 698 ~~~~~~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~--------- 768 (962)
+++|+++++|++|++++++|+.|+++|++++|+|||++.||.++|+++||...
T Consensus 337 ------------------~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi~~~~~p~~K~~~ 398 (499)
T TIGR01494 337 ------------------TLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGIFARVTPEEKAAL 398 (499)
T ss_pred ------------------eEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCceeccCHHHHHHH
Confidence 58999999999999999999999999999999999999999999999998321
Q ss_pred ---------------CccccCCCCCcCcEEEeccChhHHHHhhcccccccCChhHHHHHHHHhHHHHHHHHHHHHHHHHh
Q psy886 769 ---------------EEDTTGKSYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISS 833 (962)
Q Consensus 769 ---------------~~~~~g~~l~~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~ai~~gR~i~~ni~k~i~~~l~~ 833 (962)
|+.++..++++|||||||| |+++||++|++|++..++.++++||+++++|++++.|.+.+
T Consensus 399 v~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~-----a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~ 473 (499)
T TIGR01494 399 VEALQKKGRVVAMTGDGVNDAPALKKADVGIAMG-----AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAY 473 (499)
T ss_pred HHHHHHCCCEEEEECCChhhHHHHHhCCCccccc-----hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1223334567999999997 79999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHH
Q psy886 834 NIGEVVSIFLTAA 846 (962)
Q Consensus 834 ni~~~~~~~~~~~ 846 (962)
|+..+.+.+.+.+
T Consensus 474 n~~~~~~a~~~~~ 486 (499)
T TIGR01494 474 NLILIPLAALLAV 486 (499)
T ss_pred HHHHHHHHHHHHH
Confidence 9987666655443
No 28
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=1e-66 Score=618.32 Aligned_cols=480 Identities=24% Similarity=0.329 Sum_probs=377.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECC-CccEEEEeCCCCCCCCEEEEcCCCccCCCceE
Q psy886 96 SFVEPFVILLILIANAIVGVWQERNAESAIEALKEYEPEMGKVIRGD-KSGVQKVRAKEIVPGDIVEVSVGDKIPADIRL 174 (962)
Q Consensus 96 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~r~~-~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v 174 (962)
.|.+++.++++++++.+++.++++|+++.+++|.++.|..++|+|+| + +++||.++|+|||+|.|++||+|||||+|
T Consensus 17 ~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~--~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v 94 (556)
T TIGR01525 17 LVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGS--EEEVPVEELQVGDIVIVRPGERIPVDGVV 94 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCe--EEEEEHHHCCCCCEEEECCCCEeccceEE
Confidence 36788999999999999999999999999999999999999999996 6 79999999999999999999999999999
Q ss_pred EeeecceeeeecccccCCCcceeecCCCCCCcccccCCCccccccCccccccchhHHHHhHHHHHHHHHhcCCccceeee
Q psy886 175 IKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAEKNGPQMCENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIR 254 (962)
Q Consensus 175 ~~G~~~~~~vdes~lTGEs~Pv~k~~g~~~~~~~~~~~~~~~~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR 254 (962)
++|.+ .||||+|||||
T Consensus 95 i~g~~---~vdes~lTGEs------------------------------------------------------------- 110 (556)
T TIGR01525 95 ISGES---EVDESALTGES------------------------------------------------------------- 110 (556)
T ss_pred Eecce---EEeehhccCCC-------------------------------------------------------------
Confidence 96532 25555555555
Q ss_pred CCccceeeecccccCCCCEEEeCCCCeecceEEEEeecCCeEEEEecCCCCCCcceeccCCCCCCCccCCCCCcceEecC
Q psy886 255 GDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSG 334 (962)
Q Consensus 255 ~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aG 334 (962)
.|+.|.++ +.+|+|
T Consensus 111 -----------------------------------------------------~pv~k~~g-------------~~v~aG 124 (556)
T TIGR01525 111 -----------------------------------------------------MPVEKKEG-------------DEVFAG 124 (556)
T ss_pred -----------------------------------------------------CCEecCCc-------------CEEeec
Confidence 44444432 569999
Q ss_pred ceeeeceEEEEEEEeccchhhHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHH
Q psy886 335 TNVAAGKARGIVMGTGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSWIKG 414 (962)
Q Consensus 335 T~v~~G~~~~vV~~tG~~T~~gki~~~~~~~~~~~tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 414 (962)
|.+.+|.++++|++||.+|.+|+|.+++.+++.+++|+|+.+++++.++.+++++++++++++++... .+
T Consensus 125 t~v~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~-------~~--- 194 (556)
T TIGR01525 125 TINGDGSLTIRVTKLGEDSTLAQIVKLVEEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLALG-------AL--- 194 (556)
T ss_pred eEECCceEEEEEEEecccCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------cc---
Confidence 99999999999999999999999999999888899999999999999999988888888877754211 01
Q ss_pred HHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhhhcCccCCchhhhhcCCeeEEEecCCCcccCCceEEEEEEEecc
Q psy886 415 AVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDK 494 (962)
Q Consensus 415 ~~~~~~~~i~l~v~~iP~~Lp~~v~i~l~~~~~~m~k~~ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~ 494 (962)
..+..++++++++|||+||++++++++.+.++|+|+|+++|+++++|+||+++++|||||||||+|+|+|.+++..++
T Consensus 195 --~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~ 272 (556)
T TIGR01525 195 --GALYRALAVLVVACPCALGLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDD 272 (556)
T ss_pred --hHHHHHHHHHhhccccchhehhHHHHHHHHHHHHHCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCC
Confidence 357789999999999999999999999999999999999999999999999999999999999999999999875432
Q ss_pred ccCCCCCcceEEEeCCccccCcceecCCCccCCCChHHHHHHHHHHhhccCCccccccccCceEEecChhHHHHHHHHHH
Q psy886 495 IEGSDSSFLEFEITGSTYEPIGDVFLNGSKIKGADYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEK 574 (962)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~ 574 (962)
.. ...+.+.. .++.+. ....+|.+.|++.++++
T Consensus 273 ~~-------------------------------~~~~~~l~---~a~~~e-------------~~~~hp~~~Ai~~~~~~ 305 (556)
T TIGR01525 273 AS-------------------------------ISEEELLA---LAAALE-------------QSSSHPLARAIVRYAKK 305 (556)
T ss_pred CC-------------------------------ccHHHHHH---HHHHHh-------------ccCCChHHHHHHHHHHh
Confidence 10 00122222 111111 12368999999999987
Q ss_pred cCCCCcccCCCchhhHHHhhhhHHhhhceeeEeecCCCCCceEEEEEecCCCCCCCCCCCEEEEeCChHHHHhccccccc
Q psy886 575 LNPFNVSKSGLGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARI 654 (962)
Q Consensus 575 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~ 654 (962)
.+..... .+ ...++| .+ +...++||+++..+..|+....
T Consensus 306 ~~~~~~~-------------------~~-~~~~~~----~~-----------------gi~~~~~g~~~~~lg~~~~~~~ 344 (556)
T TIGR01525 306 RGLELPK-------------------QE-DVEEVP----GK-----------------GVEATVDGQEEVRIGNPRLLEL 344 (556)
T ss_pred cCCCccc-------------------cc-CeeEec----CC-----------------eEEEEECCeeEEEEecHHHHhh
Confidence 6542100 00 001111 11 3344455555555545543211
Q ss_pred CCeeeeCCHHHHHHHHHHHHHHhcccchhheeeEEeeeCCCCccccccccccccccccCCeEEEEEecccCCCCccHHHH
Q psy886 655 GSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDS 734 (962)
Q Consensus 655 ~~~~~~l~~~~~~~i~~~~~~~~~~~~glRvl~~A~~~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~ea 734 (962)
++.. . .......+++. .+|+|++.++ .|.+++|.+.++|++|||++++
T Consensus 345 ~~~~--~-----~~~~~~~~~~~--~~g~~~~~v~-----------------------~~~~~~g~i~~~d~~~~g~~e~ 392 (556)
T TIGR01525 345 AAEP--I-----SASPDLLNEGE--SQGKTVVFVA-----------------------VDGELLGVIALRDQLRPEAKEA 392 (556)
T ss_pred cCCC--c-----hhhHHHHHHHh--hCCcEEEEEE-----------------------ECCEEEEEEEecccchHhHHHH
Confidence 1111 1 11122233343 6788888876 3458999999999999999999
Q ss_pred HHHHHHcC-CEEEEEcCCCHHHHHHHHHHcCCCCC---------------------------CccccCCCCCcCcEEEec
Q psy886 735 IARCRAAG-IRVIVITGDNKATAEAICRRIGVFTE---------------------------EEDTTGKSYSKAEIGIAM 786 (962)
Q Consensus 735 I~~l~~AG-I~v~MiTGD~~~TA~~IA~~~GI~~~---------------------------~~~~~g~~l~~AdVGIAm 786 (962)
|+.|+++| ++++|+|||+..+|.++++++||..- |+..+.+.+++|||||+|
T Consensus 393 l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~ 472 (556)
T TIGR01525 393 IAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDEVHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAM 472 (556)
T ss_pred HHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCeeeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEe
Confidence 99999999 99999999999999999999999421 011122234799999999
Q ss_pred cChhHHHHhhcccccccCChhHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHH
Q psy886 787 GSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNIGEVV 839 (962)
Q Consensus 787 g~gtdvAkeaADivL~dd~f~~iv~ai~~gR~i~~ni~k~i~~~l~~ni~~~~ 839 (962)
|.+++.++++||+++.+|+++.|++++++||++++||++++.|++++|+..+.
T Consensus 473 g~~~~~~~~~Ad~vi~~~~~~~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~ 525 (556)
T TIGR01525 473 GAGSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIP 525 (556)
T ss_pred CCCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987653
No 29
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=5.1e-65 Score=599.73 Aligned_cols=460 Identities=24% Similarity=0.358 Sum_probs=364.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEE
Q psy886 96 SFVEPFVILLILIANAIVGVWQERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLI 175 (962)
Q Consensus 96 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~ 175 (962)
.|++++.++++++++.+++.++++|+++.+++|.++.|++++|+|+|+ ++++++++|+|||+|.|++||+|||||+|+
T Consensus 17 ~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~--~~~i~~~~l~~GDiv~v~~G~~iP~Dg~ii 94 (536)
T TIGR01512 17 EYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGS--LEEVAVEELKVGDVVVVKPGERVPVDGVVL 94 (536)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCE--EEEEEHHHCCCCCEEEEcCCCEeecceEEE
Confidence 377888899999999999999999999999999999999999999998 799999999999999999999999999999
Q ss_pred eeecceeeeecccccCCCcceeecCCCCCCcccccCCCccccccCccccccchhHHHHhHHHHHHHHHhcCCccceeeeC
Q psy886 176 KIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAEKNGPQMCENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRG 255 (962)
Q Consensus 176 ~G~~~~~~vdes~lTGEs~Pv~k~~g~~~~~~~~~~~~~~~~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~ 255 (962)
+|.+. ||||+|||||.|+.|
T Consensus 95 ~g~~~---vdes~lTGEs~pv~k--------------------------------------------------------- 114 (536)
T TIGR01512 95 SGTST---VDESALTGESVPVEK--------------------------------------------------------- 114 (536)
T ss_pred eCcEE---EEecccCCCCCcEEe---------------------------------------------------------
Confidence 75332 555555555555444
Q ss_pred CccceeeecccccCCCCEEEeCCCCeecceEEEEeecCCeEEEEecCCCCCCcceeccCCCCCCCccCCCCCcceEecCc
Q psy886 256 DKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGT 335 (962)
Q Consensus 256 g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT 335 (962)
+++ +.+|+||
T Consensus 115 ---------------------------------------------------------~~g-------------~~v~aGt 124 (536)
T TIGR01512 115 ---------------------------------------------------------APG-------------DEVFAGA 124 (536)
T ss_pred ---------------------------------------------------------CCC-------------CEEEeee
Confidence 432 4689999
Q ss_pred eeeeceEEEEEEEeccchhhHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHH
Q psy886 336 NVAAGKARGIVMGTGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSWIKGA 415 (962)
Q Consensus 336 ~v~~G~~~~vV~~tG~~T~~gki~~~~~~~~~~~tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 415 (962)
.+.+|+++++|++||.+|.+|||.+++.+.+.+++|+|+.++++++++.++++++++++|+++... . .+
T Consensus 125 ~v~~G~~~~~V~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-~~---- 193 (536)
T TIGR01512 125 INLDGVLTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLL------K-RW---- 193 (536)
T ss_pred EECCceEEEEEEEeccccHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------c-cc----
Confidence 999999999999999999999999999988889999999999999999999888888777765321 1 11
Q ss_pred HHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhhhcCccCCchhhhhcCCeeEEEecCCCcccCCceEEEEEEEeccc
Q psy886 416 VYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKI 495 (962)
Q Consensus 416 ~~~~~~~i~l~v~~iP~~Lp~~v~i~l~~~~~~m~k~~ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~ 495 (962)
...+.+++++++++|||+||+++++++..+..+++|+|+++|+++++|++|+++++|||||||||+|+|+|.+++..
T Consensus 194 ~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~--- 270 (536)
T TIGR01512 194 PFWVYRALVLLVVASPCALVISAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA--- 270 (536)
T ss_pred HHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH---
Confidence 12577889999999999999999999999999999999999999999999999999999999999999999887421
Q ss_pred cCCCCCcceEEEeCCccccCcceecCCCccCCCChHHHHHHHHHHhhccCCccccccccCceEEecChhHHHHHHHHHHc
Q psy886 496 EGSDSSFLEFEITGSTYEPIGDVFLNGSKIKGADYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKL 575 (962)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~~ 575 (962)
+++..++.+. ....+|.+.|++.++++.
T Consensus 271 ---------------------------------------~~l~~a~~~e-------------~~~~hp~~~Ai~~~~~~~ 298 (536)
T TIGR01512 271 ---------------------------------------EVLRLAAAAE-------------QASSHPLARAIVDYARKR 298 (536)
T ss_pred ---------------------------------------HHHHHHHHHh-------------ccCCCcHHHHHHHHHHhc
Confidence 1111111111 123679999999888654
Q ss_pred CCCCcccCCCchhhHHHhhhhHHhhhceeeEeecCCCCCceEEEEEecCCCCCCCCCCCEEEEeCChHHHHhcccccccC
Q psy886 576 NPFNVSKSGLGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIG 655 (962)
Q Consensus 576 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~ 655 (962)
+. +....++| .+.+...++ +. .+..|+++.+.+..
T Consensus 299 ~~------------------------~~~~~~~~----g~gi~~~~~----------g~-~~~ig~~~~~~~~~------ 333 (536)
T TIGR01512 299 EN------------------------VESVEEVP----GEGVRAVVD----------GG-EVRIGNPRSLEAAV------ 333 (536)
T ss_pred CC------------------------CcceEEec----CCeEEEEEC----------Ce-EEEEcCHHHHhhcC------
Confidence 20 00011111 111221111 11 23457665432210
Q ss_pred CeeeeCCHHHHHHHHHHHHHHhcccchhheeeEEeeeCCCCccccccccccccccccCCeEEEEEecccCCCCccHHHHH
Q psy886 656 SQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSI 735 (962)
Q Consensus 656 ~~~~~l~~~~~~~i~~~~~~~~~~~~glRvl~~A~~~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI 735 (962)
.+ .+ ..+|.+++.+ ..|..++|.+.++|++|||++++|
T Consensus 334 -----~~------------~~--~~~~~~~~~v-----------------------~~~~~~~g~i~~~d~l~~~~~e~i 371 (536)
T TIGR01512 334 -----GA------------RP--ESAGKTIVHV-----------------------ARDGTYLGYILLSDEPRPDAAEAI 371 (536)
T ss_pred -----Cc------------ch--hhCCCeEEEE-----------------------EECCEEEEEEEEeccchHHHHHHH
Confidence 00 11 1334443332 256789999999999999999999
Q ss_pred HHHHHcCC-EEEEEcCCCHHHHHHHHHHcCCCCC---------------------------CccccCCCCCcCcEEEecc
Q psy886 736 ARCRAAGI-RVIVITGDNKATAEAICRRIGVFTE---------------------------EEDTTGKSYSKAEIGIAMG 787 (962)
Q Consensus 736 ~~l~~AGI-~v~MiTGD~~~TA~~IA~~~GI~~~---------------------------~~~~~g~~l~~AdVGIAmg 787 (962)
++|+++|+ +++|+|||+..+|..+++++||..- |+..+.+.+++||+||+||
T Consensus 372 ~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g 451 (536)
T TIGR01512 372 AELKALGIEKVVMLTGDRRAVAERVARELGIDEVHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMG 451 (536)
T ss_pred HHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChhhhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeC
Confidence 99999999 9999999999999999999999421 0111222347999999999
Q ss_pred -ChhHHHHhhcccccccCChhHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHH
Q psy886 788 -SGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVS 840 (962)
Q Consensus 788 -~gtdvAkeaADivL~dd~f~~iv~ai~~gR~i~~ni~k~i~~~l~~ni~~~~~ 840 (962)
+|++.++++||+++++|++..+.+++++||++++||++|+.|++.||+..+.+
T Consensus 452 ~~~~~~~~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~ 505 (536)
T TIGR01512 452 ASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQNVVIALGIILLLILL 505 (536)
T ss_pred CCccHHHHHhCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999764443
No 30
>KOG0206|consensus
Probab=100.00 E-value=4.2e-66 Score=620.22 Aligned_cols=717 Identities=19% Similarity=0.222 Sum_probs=509.4
Q ss_pred hhccCccccCC------CChhHHHHHHHHHHHHHHHHHHHHhhhccccccccccchhHHHHHHHHHHHHHHHHHHHHHHH
Q psy886 48 DFIPARVTSLS------PSENVHIASTNFAVLFCLCPQVLALFEEHEDFNSTLTSFVEPFVILLILIANAIVGVWQERNA 121 (962)
Q Consensus 48 ~~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 121 (962)
.|..|.+..-+ .++++++++.....++.++..++.... ..++ .++......++++.+..+...++.|.+++.
T Consensus 31 ~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip-~~~~-~~~~~~~pl~~vl~~t~iKd~~eD~rR~~~ 108 (1151)
T KOG0206|consen 31 KYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP-LSPF-NPYTTLVPLLFVLGITAIKDAIEDYRRHKQ 108 (1151)
T ss_pred cccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc-cccc-CccceeeceeeeehHHHHHHHHhhhhhhhc
Confidence 45555553333 256777888888889888888887765 2222 222233444555555666666677666666
Q ss_pred HHHHHHHhccCCCeEEEEECCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeee--cceeeeecccccCCCcceeec
Q psy886 122 ESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIY--STTIRIDQSILTGESVSVIKH 199 (962)
Q Consensus 122 ~~~l~~l~~~~~~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~--~~~~~vdes~lTGEs~Pv~k~ 199 (962)
.+.+. ...++|.+++.. +++..+.+|++||+|.+..++.+|||.+++..+ .+.|+|..++|.||+.--.|.
T Consensus 109 D~~iN------~~~~~v~~~~~~-~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~k~ 181 (1151)
T KOG0206|consen 109 DKEVN------NRKVEVLRGDGC-FVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKVKQ 181 (1151)
T ss_pred cHHhh------cceeEEecCCce-eeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccceee
Confidence 65443 568899998765 789999999999999999999999999999633 256899999999998666654
Q ss_pred CCCCCCcccccCCCccccccCccccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEEEeCCC
Q psy886 200 TDAVPDPRAEKNGPQMCENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVG 279 (962)
Q Consensus 200 ~g~~~~~~~~~~~~~~~~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~G 279 (962)
.-...... ...
T Consensus 182 ~l~~~~~~---------------------------------------------------------------------~~~ 192 (1151)
T KOG0206|consen 182 ALECTSKL---------------------------------------------------------------------DSE 192 (1151)
T ss_pred ehhhhhcc---------------------------------------------------------------------ccc
Confidence 32110000 000
Q ss_pred Ceec--ceEEEEeecCCeEEEEecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeec-eEEEEEEEeccchhhH
Q psy886 280 DKIP--ADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAG-KARGIVMGTGLNTAIG 356 (962)
Q Consensus 280 d~vP--aD~~ll~~~~~~l~VdeS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G-~~~~vV~~tG~~T~~g 356 (962)
+... -+.+-.+....+++. .+|.-.. ... ..+...+|++++|+.+.+. ++.|+|++||++|
T Consensus 193 ~~~~~~~~~i~cE~p~~~ly~----f~g~l~~-~~~--------~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dt--- 256 (1151)
T KOG0206|consen 193 DSLKNFKGWIECEDPNANLYT----FVGNLEL-QGQ--------IYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDT--- 256 (1151)
T ss_pred ccccccCCceEEcCCcccHhh----hhhheee-ccC--------CCCCcHHHcccCCceeccCcEEEEEEEEcCCcc---
Confidence 0000 111111111111111 1222210 000 0035567999999999776 5999999999999
Q ss_pred HHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCC-CCC-Ccch-------HHHHHHHHHHHHHHH
Q psy886 357 KIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDP-AHG-GSWI-------KGAVYYFKIAVALAV 427 (962)
Q Consensus 357 ki~~~~~~~~~~~tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~~~~~~-~~~-~~~~-------~~~~~~~~~~i~l~v 427 (962)
|++++...++.+++++++.++.....+..+.+++|++..+....+.... ... ..|+ ...+..|++++.++.
T Consensus 257 K~~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~il~~ 336 (1151)
T KOG0206|consen 257 KLMQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFIILYQ 336 (1151)
T ss_pred hHHHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCchHHHHHHHHHHHHHhhhh
Confidence 7777887889999999999999988888777777776655432222100 000 0111 123567888999999
Q ss_pred hhcCCchHHHHHHHHHHHHHHHhh----------hcCccCCchhhhhcCCeeEEEecCCCcccCCceEEEEEEEeccccC
Q psy886 428 AAIPEGLPAVITTCLALGTRRMAK----------KNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEG 497 (962)
Q Consensus 428 ~~iP~~Lp~~v~i~l~~~~~~m~k----------~~ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~ 497 (962)
..+|.+|++++++...+++..+.+ ..+.+|+.+..|+||+|++|++|||||||+|.|++++|.+.+..|+
T Consensus 337 ~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg 416 (1151)
T KOG0206|consen 337 YLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYG 416 (1151)
T ss_pred ceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcccc
Confidence 999999999999999998866543 4578999999999999999999999999999999999999998877
Q ss_pred CCCCcceEEEeCC-----------ccccCcceecCCCccCCCChHHHHHHHHHHhhccCCcccccccc-CceEEecChhH
Q psy886 498 SDSSFLEFEITGS-----------TYEPIGDVFLNGSKIKGADYETLHELGTICIMCNDSAIDFNEFK-QAFEKVGEATE 565 (962)
Q Consensus 498 ~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lcn~~~~~~~~~~-~~~~~~g~p~e 565 (962)
............. +..-......++.+......+....+..++++||+..++..+.. ...+...+|+|
T Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE 496 (1151)
T KOG0206|consen 417 RNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDE 496 (1151)
T ss_pred cCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcH
Confidence 6543221111100 00000111111111111345667888999999999988773322 45778899999
Q ss_pred HHHHHHHHHcCCCCcccCCCchhhHHHhhhhHHhhhceeeEeecCCCCCceEEEEEecCCCCCCCCCCCEEEEeCChHHH
Q psy886 566 TALIVLAEKLNPFNVSKSGLGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGV 645 (962)
Q Consensus 566 ~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~KGA~e~i 645 (962)
.||+..|+..|+....++.....-. ..+.+..|+.++.+||+|+||||||+++.+++ ++.+|||||+.+|
T Consensus 497 ~AlV~aAr~~gf~f~~Rt~~~vti~----~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g------~i~LycKGADsvI 566 (1151)
T KOG0206|consen 497 AALVEAARELGFVFLGRTPDSVTIR----ELGVEETYELLNVLEFNSTRKRMSVIVRDPDG------RILLYCKGADSVI 566 (1151)
T ss_pred HHHHHHHHhcCceeeeccCceEEEe----ccccceeEEEEEEeccccccceeEEEEEcCCC------cEEEEEcCcchhh
Confidence 9999999999987766544221111 11235689999999999999999999998753 7899999999999
Q ss_pred HhcccccccCCeeeeCCHHHHHHHHHHHHHHhcccchhheeeEEeeeCCCCcccc---------------cccccccccc
Q psy886 646 LERCTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDM---------------NLADSTKFAS 710 (962)
Q Consensus 646 l~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~glRvl~~A~~~~~~~~~~~---------------~~~~~~~~~~ 710 (962)
+++++. -....+++..+++++|+ .+|||+|++|||+++.++... +....+.++.
T Consensus 567 ~erL~~---------~~~~~~e~T~~Hl~~yA--~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~ 635 (1151)
T KOG0206|consen 567 FERLSK---------NGEKLREKTQEHLEEYA--TEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEE 635 (1151)
T ss_pred Hhhhhh---------cchHHHHHHHHHHHHHH--hhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHH
Confidence 999975 22355677778888996 999999999999987654221 1111234567
Q ss_pred ccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCcc-------------------
Q psy886 711 YEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEED------------------- 771 (962)
Q Consensus 711 ~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~~~~------------------- 771 (962)
+|+||+++|.+++||+||+||||+|+.|++||||+||+|||+.|||++||.+|+++.++..
T Consensus 636 iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~ 715 (1151)
T KOG0206|consen 636 IEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATA 715 (1151)
T ss_pred HHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHH
Confidence 8999999999999999999999999999999999999999999999999999999875321
Q ss_pred -----------------------------ccCCCC---------------------------------------------
Q psy886 772 -----------------------------TTGKSY--------------------------------------------- 777 (962)
Q Consensus 772 -----------------------------~~g~~l--------------------------------------------- 777 (962)
++|+.+
T Consensus 716 ~~~~~l~~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~ 795 (1151)
T KOG0206|consen 716 ALKETLLRKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKA 795 (1151)
T ss_pred HHHHHHHHhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCc
Confidence 112211
Q ss_pred ---------------CcCcEEEecc-ChhHHHHhhcccccccCChhHHHHHHH-HhHHHHHHHHHHHHHHHHhhHHHHHH
Q psy886 778 ---------------SKAEIGIAMG-SGTAVAKSASEMVLADDNFSSIVAAVE-EGRAIYNNMKQFIRYLISSNIGEVVS 840 (962)
Q Consensus 778 ---------------~~AdVGIAmg-~gtdvAkeaADivL~dd~f~~iv~ai~-~gR~i~~ni~k~i~~~l~~ni~~~~~ 840 (962)
..|||||.++ .+-..|..+||.-+. .|.-+-+++- +||.-|.++.|.+.|.+..|+...++
T Consensus 796 ~TLAIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIa--qFrfL~rLLLVHGhW~Y~R~a~~ilyfFYKNi~f~~~ 873 (1151)
T KOG0206|consen 796 VTLAIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIA--QFRFLERLLLVHGHWSYIRLAKMILYFFYKNIAFTFT 873 (1151)
T ss_pred eEEEeeCCCccchheeeCCcCeeeccchhhhhhhcccchHH--HHHHHhhhheeecceeHHHHHHHHHHHHHHHHHHHHH
Confidence 1699999998 555556678888885 4666666554 69999999999999999999999999
Q ss_pred HHHHHHhCCC---ccchhHHH-----hhCccccccccc---CCCCcCccchh
Q psy886 841 IFLTAALGLP---EALIKKIS-----TTNRGKKKKLSY---NFLDISLLGPA 881 (962)
Q Consensus 841 ~~~~~~~~~~---~pl~~~qL-----~~d~~~a~al~~---e~~~~~~m~~p 881 (962)
.+++.++... ....+.+| +.-.+|-++||. |.+++..|+-|
T Consensus 874 ~fwy~f~~gfSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P 925 (1151)
T KOG0206|consen 874 LFWYQFFNGFSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFP 925 (1151)
T ss_pred HHHhhhcCCCCCCccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCC
Confidence 9999887432 23444552 556788888876 66677778888
No 31
>KOG0210|consensus
Probab=100.00 E-value=3.9e-66 Score=565.68 Aligned_cols=687 Identities=18% Similarity=0.206 Sum_probs=472.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEE-ECC
Q psy886 64 HIASTNFAVLFCLCPQVLALFEEHEDFNSTLTSFVEPFVILLILIANAIVGVWQERNAESAIEALKEYEPEMGKVI-RGD 142 (962)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~-r~~ 142 (962)
+.++.....++.++..+..+...... .....+|.....++++.++.+.++.+++++..+... .+..+++ |+|
T Consensus 100 ~~qF~~F~nlyfll~alsQ~ip~~~i-g~l~ty~~pl~fvl~itl~keavdd~~r~~rd~~~N------se~y~~ltr~~ 172 (1051)
T KOG0210|consen 100 FEQFKFFLNLYFLLVALSQLIPALKI-GYLSTYWGPLGFVLTITLIKEAVDDLKRRRRDRELN------SEKYTKLTRDG 172 (1051)
T ss_pred HHHHHHHHHHHHHHHHHHhhCchhee-cchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhh------hhhheeeccCC
Confidence 34444555555555544443322211 113345666777788888888999988887776553 3333444 666
Q ss_pred CccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeee--cceeeeecccccCCCcceeecCCCCCCcccccCCCccccccC
Q psy886 143 KSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIY--STTIRIDQSILTGESVSVIKHTDAVPDPRAEKNGPQMCENDR 220 (962)
Q Consensus 143 ~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~--~~~~~vdes~lTGEs~Pv~k~~g~~~~~~~~~~~~~~~~~~~ 220 (962)
. ...|++++++||+|.++.+++||||.++++-+ ++.+.|...-|.||++---|-+-....
T Consensus 173 ~---~~~~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGETDWKLrl~vp~tQ--------------- 234 (1051)
T KOG0210|consen 173 T---RREPSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGETDWKLRLPVPRTQ--------------- 234 (1051)
T ss_pred c---ccccccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCcccceeeccchhhc---------------
Confidence 5 33499999999999999999999999999754 466888888899988544443221110
Q ss_pred ccccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCC-CEEEeCCCCeecceEEEEeecCCeEEEE
Q psy886 221 NEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPG-DIVEVSVGDKIPADIRLIKIYSTTIRID 299 (962)
Q Consensus 221 ~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~G-DIV~l~~Gd~vPaD~~ll~~~~~~l~Vd 299 (962)
.+.-+ |+..+. |-|+-= .-|
T Consensus 235 ----------------------------------------------~l~~~~el~~i~----v~Ae~P---------~kd 255 (1051)
T KOG0210|consen 235 ----------------------------------------------HLTEDSELMEIS----VYAEKP---------QKD 255 (1051)
T ss_pred ----------------------------------------------cCCcccchheEE----EeccCc---------chh
Confidence 00001 111111 111100 011
Q ss_pred ecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEeccchhhHHHHhhccccccCCCchHHHHHHH
Q psy886 300 QSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLNTAIGKIRTEMSETEEIKTPLQQKLDEF 379 (962)
Q Consensus 300 eS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~T~~gki~~~~~~~~~~~tplq~~l~~~ 379 (962)
=-+.+|-- |.. .++...+.+-+|+++++|.|.+|.++|+|+|||.+| |-..+...++.+-..++.++|.+
T Consensus 256 Ih~F~Gt~----~~~---d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dt---RsvMNts~pr~KvGllelEiN~l 325 (1051)
T KOG0210|consen 256 IHSFVGTF----TIT---DSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDT---RSVMNTSRPRSKVGLLELEINGL 325 (1051)
T ss_pred hHhhEEEE----EEe---cCCCCCcccccceeeeeeeEecCcEEEEEEEecccH---HHHhccCCcccccceeeeecccH
Confidence 11111110 000 011113455679999999999999999999999999 76777778888888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhhh----cCc
Q psy886 380 GEQLSKVISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKK----NAI 455 (962)
Q Consensus 380 ~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~Lp~~v~i~l~~~~~~m~k~----~il 455 (962)
.+++..+++++++++..... .+..|+. .+++++.++...||.+|-+.+.++..+-.+.+.++ |.+
T Consensus 326 tKiL~~~vlvLs~vmv~~~g-------~~~~wyi----~~~RfllLFS~IIPISLRvnlDmaK~~ys~~i~~D~~Ipgtv 394 (1051)
T KOG0210|consen 326 TKILFCFVLVLSIVMVAMKG-------FGSDWYI----YIIRFLLLFSSIIPISLRVNLDMAKIVYSWQIEHDKNIPGTV 394 (1051)
T ss_pred HHHHHHHHHHHHHHHHHhhc-------CCCchHH----HHHHHHHHHhhhceeEEEEehhHHHhhHhhhcccCCCCCcee
Confidence 99998887777766654321 1346654 46778889999999999999999999999999876 467
Q ss_pred cCCchhhhhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcceEEEeCCcccc-CcceecCCCccCCCChHHHH
Q psy886 456 VRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEP-IGDVFLNGSKIKGADYETLH 534 (962)
Q Consensus 456 vr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~ 534 (962)
||+...-|+||+++++.+|||||||+|+|.+++++.+.-.+..+....-...-.+.+.| ..+-.......+.+....++
T Consensus 395 vRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~~~~~~~k~~~s~rv~ 474 (1051)
T KOG0210|consen 395 VRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGKGALSRVKKDMSARVR 474 (1051)
T ss_pred eecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCcccccccchhhcCcccHHHH
Confidence 99999999999999999999999999999999999875444332111000000001111 00000011112233445678
Q ss_pred HHHHHHhhccCCccccccccCceEEecChhHHHHHHHHHHcCCCCcccCCCchhhHHHhhhhHHhhhceeeEeecCCCCC
Q psy886 535 ELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQAIAVRQDVETKWKKEFTLEFSRDR 614 (962)
Q Consensus 535 ~~~~~~~lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~r 614 (962)
++..++++||++++..++.+...++..+|+|+|++++.+..|.....+.. .........+....|++++.|||+|+.
T Consensus 475 ~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~---~~itL~~~~~~~~~yqIL~vFPFtsEt 551 (1051)
T KOG0210|consen 475 NAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKRDR---HAITLRVPLDDELNYQILQVFPFTSET 551 (1051)
T ss_pred HHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeeccc---ceEEEecCCCcceeEEEEEEecccccc
Confidence 88889999999998877655677889999999999999999886554321 111111123345679999999999999
Q ss_pred ceEEEEEecCCCCCCCCCCCEEEEeCChHHHHhcccccccCCeeeeCCHHHHHHHHHHHHHHhcccchhheeeEEeeeCC
Q psy886 615 KSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNP 694 (962)
Q Consensus 615 k~msvv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~glRvl~~A~~~~~ 694 (962)
|||.++++++.. +++..|.|||+-++-..-.. .+.+++....| +++|||+|.+|.|.++
T Consensus 552 KRMGIIVr~e~~-----~evtfylKGAD~VMs~iVq~--------------NdWleEE~gNM--AREGLRtLVvakK~Ls 610 (1051)
T KOG0210|consen 552 KRMGIIVRDETT-----EEVTFYLKGADVVMSGIVQY--------------NDWLEEECGNM--AREGLRTLVVAKKVLS 610 (1051)
T ss_pred ceeeEEEecCCC-----ceEEEEEecchHHHhccccc--------------chhhhhhhhhh--hhhcceEEEEEecccC
Confidence 999999997643 27899999999877654321 12233444555 5999999999999887
Q ss_pred CCcccc---------------ccccccccc-cccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHH
Q psy886 695 LKPEDM---------------NLADSTKFA-SYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEA 758 (962)
Q Consensus 695 ~~~~~~---------------~~~~~~~~~-~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~ 758 (962)
.++.+. .....+..+ .+|+||.++|++|+||++|++|+.+++.||+|||||||+|||+.|||++
T Consensus 611 ~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~c 690 (1051)
T KOG0210|consen 611 EEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAIC 690 (1051)
T ss_pred HHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheee
Confidence 543211 000011112 5789999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCCcc-----------------------------ccCCCC--------------------------------
Q psy886 759 ICRRIGVFTEEED-----------------------------TTGKSY-------------------------------- 777 (962)
Q Consensus 759 IA~~~GI~~~~~~-----------------------------~~g~~l-------------------------------- 777 (962)
||++.+++..+.. ++|+.+
T Consensus 691 iAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA 770 (1051)
T KOG0210|consen 691 IAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKA 770 (1051)
T ss_pred eehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHH
Confidence 9999999764321 233322
Q ss_pred ---------------------------CcCcEEEecc-ChhHHHHhhcccccccCChhHHHHHHHH-hHHHHHHHHHHHH
Q psy886 778 ---------------------------SKAEIGIAMG-SGTAVAKSASEMVLADDNFSSIVAAVEE-GRAIYNNMKQFIR 828 (962)
Q Consensus 778 ---------------------------~~AdVGIAmg-~gtdvAkeaADivL~dd~f~~iv~ai~~-gR~i~~ni~k~i~ 828 (962)
.+||+||.+- ..-..|.-|||.-+. .|+.+-+++.| ||+.|++--|.-+
T Consensus 771 ~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSIt--qF~Hv~rLLl~HGR~SYkrsa~laq 848 (1051)
T KOG0210|consen 771 QVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSIT--QFSHVSRLLLWHGRNSYKRSAKLAQ 848 (1051)
T ss_pred HHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccccccchhccccHH--HHHHHHHHhhccccchHHHHHHHHH
Confidence 2899999875 444556778999985 59999999987 9999999999999
Q ss_pred HHHHhhHHHHHHHHHHHHhCCCccchhHH--H------hhCcccccccccCCC--CcCccchh
Q psy886 829 YLISSNIGEVVSIFLTAALGLPEALIKKI--S------TTNRGKKKKLSYNFL--DISLLGPA 881 (962)
Q Consensus 829 ~~l~~ni~~~~~~~~~~~~~~~~pl~~~q--L------~~d~~~a~al~~e~~--~~~~m~~p 881 (962)
|.+-.......+..++.......|..-.| | +..++|.++|..+.. +.-.|.-|
T Consensus 849 fViHRGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSlv~d~Dv~~~~a~~yP 911 (1051)
T KOG0210|consen 849 FVIHRGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSLVLDRDVSESLAVLYP 911 (1051)
T ss_pred HHHhhhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhheeeecccccHHHHhhhH
Confidence 98766655444555544444445666666 3 667899999988654 23334445
No 32
>KOG0209|consensus
Probab=100.00 E-value=4.1e-56 Score=495.91 Aligned_cols=530 Identities=22% Similarity=0.270 Sum_probs=370.8
Q ss_pred HHhhhhhhccCccccCCCChhHHHH--HHHHHHHHHHHHHHHHhhhccccccccccchhHHHHHHHHHHHHHHHHHHHHH
Q psy886 42 LRLRQIDFIPARVTSLSPSENVHIA--STNFAVLFCLCPQVLALFEEHEDFNSTLTSFVEPFVILLILIANAIVGVWQER 119 (962)
Q Consensus 42 ~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 119 (962)
+......||.|......|.....+. ....++.+.+++..+|.... +|+.++..+++++.-+.--.+|+.
T Consensus 169 i~~a~~~~G~N~fdi~vPtF~eLFkE~A~aPfFVFQVFcvgLWCLDe---------yWYySlFtLfMli~fE~tlV~Qrm 239 (1160)
T KOG0209|consen 169 IKLAKHKYGKNKFDIVVPTFSELFKEHAVAPFFVFQVFCVGLWCLDE---------YWYYSLFTLFMLIAFEATLVKQRM 239 (1160)
T ss_pred HHHHHHHhcCCccccCCccHHHHHHHhccCceeeHhHHhHHHHHhHH---------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444455999998888886555444 77888899999999998754 366677777777766666667777
Q ss_pred HHHHHHHHHhccCCCeEEEEECCCccEEEEeCCCCCCCCEEEEcC---CCccCCCceEEeeecceeeeecccccCCCcce
Q psy886 120 NAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSV---GDKIPADIRLIKIYSTTIRIDQSILTGESVSV 196 (962)
Q Consensus 120 ~~~~~l~~l~~~~~~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~---G~~iP~Dg~v~~G~~~~~~vdes~lTGEs~Pv 196 (962)
|+.+.++++.. .|..+.|+|+++ |+.+.++||.|||+|.+.. ...||||-+++.|++- ||||||||||.|.
T Consensus 240 ~~lse~R~Mg~-kpy~I~v~R~kK--W~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~Gsci---VnEaMLtGESvPl 313 (1160)
T KOG0209|consen 240 RTLSEFRTMGN-KPYTINVYRNKK--WVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRGSCI---VNEAMLTGESVPL 313 (1160)
T ss_pred HHHHHHHhcCC-CceEEEEEecCc--ceeccccccCCCceEEeccCcccCcCCceEEEEeccee---echhhhcCCCccc
Confidence 77666665544 577999999998 9999999999999999976 5669999999977666 9999999999999
Q ss_pred eecCCCCCCcccccCCCccccccCccccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEEEe
Q psy886 197 IKHTDAVPDPRAEKNGPQMCENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEV 276 (962)
Q Consensus 197 ~k~~g~~~~~~~~~~~~~~~~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l 276 (962)
.|++-..-+.-.
T Consensus 314 ~KE~Ie~~~~d~-------------------------------------------------------------------- 325 (1160)
T KOG0209|consen 314 MKESIELRDSDD-------------------------------------------------------------------- 325 (1160)
T ss_pred cccccccCChhh--------------------------------------------------------------------
Confidence 997653111100
Q ss_pred CCCCeecceEEEEeecCCeEEEEecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceee-------------eceEE
Q psy886 277 SVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVA-------------AGKAR 343 (962)
Q Consensus 277 ~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~-------------~G~~~ 343 (962)
+ ++++. .++..++|.||.++ +|-+.
T Consensus 326 ----------~---------------ld~~~-----------------d~k~hVlfGGTkivQht~p~~~slk~pDggc~ 363 (1160)
T KOG0209|consen 326 ----------I---------------LDIDR-----------------DDKLHVLFGGTKIVQHTPPKKASLKTPDGGCV 363 (1160)
T ss_pred ----------h---------------ccccc-----------------ccceEEEEcCceEEEecCCccccccCCCCCeE
Confidence 0 00000 12335667777664 45689
Q ss_pred EEEEEeccchhhHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHH
Q psy886 344 GIVMGTGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAV 423 (962)
Q Consensus 344 ~vV~~tG~~T~~gki~~~~~~~~~~~tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i 423 (962)
+.|++||.+|..|++.+.+-...++-|.-.++. +..++ +.++++++... +.|. ...... .+.-...|+-++
T Consensus 364 a~VlrTGFeTSQGkLvRtilf~aervTaNn~Et--f~FIL--FLlVFAiaAa~--Yvwv-~Gskd~--~RsrYKL~LeC~ 434 (1160)
T KOG0209|consen 364 AYVLRTGFETSQGKLVRTILFSAERVTANNRET--FIFIL--FLLVFAIAAAG--YVWV-EGSKDP--TRSRYKLFLECT 434 (1160)
T ss_pred EEEEeccccccCCceeeeEEecceeeeeccHHH--HHHHH--HHHHHHHHhhh--eEEE-ecccCc--chhhhheeeeee
Confidence 999999999999999988877655555433332 22122 22222222111 1111 100100 011122466677
Q ss_pred HHHHhhcCCchHHHHHHHHHHHHHHHhhhcCccCCchhhhhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcc
Q psy886 424 ALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFL 503 (962)
Q Consensus 424 ~l~v~~iP~~Lp~~v~i~l~~~~~~m~k~~ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~ 503 (962)
.++...||+.||+-++++...+...++|.+++|..+-.+.-.|++|+.|||||||||+..|.|..+.-.+.-.
T Consensus 435 LIlTSVvPpELPmELSmAVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~------- 507 (1160)
T KOG0209|consen 435 LILTSVVPPELPMELSMAVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADE------- 507 (1160)
T ss_pred EEEeccCCCCCchhhhHHHHHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCc-------
Confidence 7888899999999999999999999999999999999999999999999999999999999998874322100
Q ss_pred eEEEeCCccccCcceecCCCccCCCChHHHHHHHHHHhhccCCccccccccCceEEecChhHHHHHHHHHHcCCCCcccC
Q psy886 504 EFEITGSTYEPIGDVFLNGSKIKGADYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKS 583 (962)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~~g~~~~~~~ 583 (962)
....|.. ....+ -..+++.||+-..-.+ ...|||.|.|.+++.... ....+
T Consensus 508 ------~~~~~~s----------~~p~~----t~~vlAscHsLv~le~------~lVGDPlEKA~l~~v~W~---~~k~~ 558 (1160)
T KOG0209|consen 508 ------GALTPAS----------KAPNE----TVLVLASCHSLVLLED------KLVGDPLEKATLEAVGWN---LEKKN 558 (1160)
T ss_pred ------ccccchh----------hCCch----HHHHHHHHHHHHHhcC------cccCChHHHHHHHhcCcc---cccCc
Confidence 0000000 00112 2345566776433221 158999999998765321 11111
Q ss_pred CCchhhHHHhhhhHHhhhceeeEeecCCCCCceEEEEEecCCCCCCCCCCCEEEEeCChHHHHhcccccccCCeeeeCCH
Q psy886 584 GLGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKFPLTA 663 (962)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~~~~~~l~~ 663 (962)
....+ .......+++..+.|+|.-||||++........ +.++++.+|||||.|-++....
T Consensus 559 ~v~p~-------~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~--s~k~~~aVKGAPEvi~~ml~dv----------- 618 (1160)
T KOG0209|consen 559 SVCPR-------EGNGKKLKIIQRYHFSSALKRMSVVASHQGPGS--SEKYFVAVKGAPEVIQEMLRDV----------- 618 (1160)
T ss_pred ccCCC-------cCCCcccchhhhhhHHHHHHHHHhhhhcccCCC--ceEEEEEecCCHHHHHHHHHhC-----------
Confidence 00000 011224566788999999999999986543211 1267899999999998876432
Q ss_pred HHHHHHHHHHHHHhcccchhheeeEEeeeCCCCccccccccccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCC
Q psy886 664 TLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGI 743 (962)
Q Consensus 664 ~~~~~i~~~~~~~~~~~~glRvl~~A~~~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI 743 (962)
.....+.+.+|+ ++|.||||++||+++.-.... .....++++|+||+|.|++.|.-|+|+|++++|+.|++++.
T Consensus 619 --P~dY~~iYk~yt--R~GsRVLALg~K~l~~~~~~q--~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH 692 (1160)
T KOG0209|consen 619 --PKDYDEIYKRYT--RQGSRVLALGYKPLGDMMVSQ--VRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSH 692 (1160)
T ss_pred --chhHHHHHHHHh--hccceEEEEecccccccchhh--hhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCc
Confidence 234455667775 999999999999987322111 11234678899999999999999999999999999999999
Q ss_pred EEEEEcCCCHHHHHHHHHHcCCCC
Q psy886 744 RVIVITGDNKATAEAICRRIGVFT 767 (962)
Q Consensus 744 ~v~MiTGD~~~TA~~IA~~~GI~~ 767 (962)
+|+||||||+.||.++|+++||..
T Consensus 693 ~vvMITGDnpLTAchVak~v~iv~ 716 (1160)
T KOG0209|consen 693 RVVMITGDNPLTACHVAKEVGIVE 716 (1160)
T ss_pred eEEEEeCCCccchheehheeeeec
Confidence 999999999999999999999964
No 33
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.6e-53 Score=452.92 Aligned_cols=552 Identities=22% Similarity=0.291 Sum_probs=394.6
Q ss_pred HHHhhhhhhccCccccCCCChhHHHHHHHHHHHHHHHHHHHHhhhccccccccccchhHHHHHHHHHHHHHHHHHHHHHH
Q psy886 41 RLRLRQIDFIPARVTSLSPSENVHIASTNFAVLFCLCPQVLALFEEHEDFNSTLTSFVEPFVILLILIANAIVGVWQERN 120 (962)
Q Consensus 41 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 120 (962)
.+.....+..| +...|+|.|+.-+.+..+..+..++.-+...... ....+....+++++.+++..+-+...|.|
T Consensus 16 A~~~af~KL~P-~~~~kNPVMFvv~vg~~lt~~l~~~~~lfg~~~~-----~~~f~~~i~~~L~fTVlFANfaEa~AEGr 89 (681)
T COG2216 16 ALKDAFKKLNP-RVLVKNPVMFVVEVGSILTTFLTIFPDLFGGTGG-----SRLFNLAITIILWFTVLFANFAEAVAEGR 89 (681)
T ss_pred HHHHHHHhcCh-HHhhhCCeEEeehHHHHHHHHHHHhhhhcCCCCc-----chhhHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 34444444433 3346788888877766555433333332221111 11123445566777888888999999999
Q ss_pred HHHHHHHHhccCC-CeEEEEECCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeecccccCCCcceeec
Q psy886 121 AESAIEALKEYEP-EMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKH 199 (962)
Q Consensus 121 ~~~~l~~l~~~~~-~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lTGEs~Pv~k~ 199 (962)
.+.+..+|++.+. ..+++++++.. ++.+++.+|+.||+|.|..||.||+||.|+||.++ ||||++||||.||.|+
T Consensus 90 gKAqAdsLr~~~~~~~A~~l~~~g~-~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG~as---VdESAITGESaPVire 165 (681)
T COG2216 90 GKAQADSLRKTKTETIARLLRADGS-IEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVAS---VDESAITGESAPVIRE 165 (681)
T ss_pred chHHHHHHHHHHHHHHHHHhcCCCC-eeeccccccccCCEEEEecCCCccCCCeEEeeeee---cchhhccCCCcceeec
Confidence 9988888888554 48888888433 89999999999999999999999999999999888 9999999999999997
Q ss_pred CCCCCCcccccCCCccccccCccccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEEEeCCC
Q psy886 200 TDAVPDPRAEKNGPQMCENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVG 279 (962)
Q Consensus 200 ~g~~~~~~~~~~~~~~~~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~G 279 (962)
.|.
T Consensus 166 sGg----------------------------------------------------------------------------- 168 (681)
T COG2216 166 SGG----------------------------------------------------------------------------- 168 (681)
T ss_pred cCC-----------------------------------------------------------------------------
Confidence 662
Q ss_pred CeecceEEEEeecCCeEEEEecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEeccchhhHHHH
Q psy886 280 DKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLNTAIGKIR 359 (962)
Q Consensus 280 d~vPaD~~ll~~~~~~l~VdeS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~T~~gki~ 359 (962)
|-| -+-.||.|.+.+.+..+++.-.+|.+.|+.
T Consensus 169 -------------------D~s----------------------------sVtGgT~v~SD~l~irita~pG~sFlDrMI 201 (681)
T COG2216 169 -------------------DFS----------------------------SVTGGTRVLSDWLKIRITANPGETFLDRMI 201 (681)
T ss_pred -------------------Ccc----------------------------cccCCcEEeeeeEEEEEEcCCCccHHHHHH
Confidence 111 145589999999999999999999999999
Q ss_pred hhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHhhcCCchHHHHH
Q psy886 360 TEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVAAIPEGLPAVIT 439 (962)
Q Consensus 360 ~~~~~~~~~~tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~Lp~~v~ 439 (962)
.+++.++.+|||-+-.++-+..-+..+.+++.+.++-+. .|.. +... .+...++|+|+.||-.....++
T Consensus 202 ~LVEgA~R~KTPNEIAL~iLL~~LTliFL~~~~Tl~p~a--~y~~---g~~~------~i~~LiALlV~LIPTTIGgLLs 270 (681)
T COG2216 202 ALVEGAERQKTPNEIALTILLSGLTLIFLLAVATLYPFA--IYSG---GGAA------SVTVLVALLVCLIPTTIGGLLS 270 (681)
T ss_pred HHhhchhccCChhHHHHHHHHHHHHHHHHHHHHhhhhHH--HHcC---CCCc------CHHHHHHHHHHHhcccHHHHHH
Confidence 999999999999998888766555544333333222221 1211 1111 2445688999999999988888
Q ss_pred HHHHHHHHHHhhhcCccCCchhhhhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcceEEEeCCccccCccee
Q psy886 440 TCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVF 519 (962)
Q Consensus 440 i~l~~~~~~m~k~~ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (962)
..-..|+.|+.+.|++.++..++|..|.+|++..|||||+|-|+-.-.+++..++
T Consensus 271 AIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~p~~g------------------------- 325 (681)
T COG2216 271 AIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFIPVPG------------------------- 325 (681)
T ss_pred HhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCceeecchhhhheecCCC-------------------------
Confidence 7778899999999999999999999999999999999999988765555544332
Q ss_pred cCCCccCCCChHHHHHHHHHHhhccCCccccccccCceEEecChhHHHHHHHHHHcCCCCcccCCCchhhHHHhhhhHHh
Q psy886 520 LNGSKIKGADYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQAIAVRQDVE 599 (962)
Q Consensus 520 ~~~~~~~~~~~~~l~~~~~~~~lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~ 599 (962)
.+.+.+ ..++.+++-. . ..|.-..++..|++.+.....
T Consensus 326 --------v~~~~l---a~aa~lsSl~---D----------eTpEGrSIV~LA~~~~~~~~~------------------ 363 (681)
T COG2216 326 --------VSEEEL---ADAAQLASLA---D----------ETPEGRSIVELAKKLGIELRE------------------ 363 (681)
T ss_pred --------CCHHHH---HHHHHHhhhc---c----------CCCCcccHHHHHHHhccCCCc------------------
Confidence 122333 3333333211 0 124445688888887642111
Q ss_pred hhce-eeEeecCCCCCceEEEEEecCCCCCCCCCCCEEEEeCChHHHHhcccccccCCeeeeCCHHHHHHHHHHHHHHhc
Q psy886 600 TKWK-KEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKFPLTATLKNRILDLTRQYGT 678 (962)
Q Consensus 600 ~~~~-~~~~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~~~ 678 (962)
.... ...-+||+.+.|+..+-.. +..-+-|||.+.+.+..+. .+.. ..++ +....++.+
T Consensus 364 ~~~~~~~~fvpFtA~TRmSGvd~~----------~~~~irKGA~dai~~~v~~---~~g~--~p~~----l~~~~~~vs- 423 (681)
T COG2216 364 DDLQSHAEFVPFTAQTRMSGVDLP----------GGREIRKGAVDAIRRYVRE---RGGH--IPED----LDAAVDEVS- 423 (681)
T ss_pred ccccccceeeecceecccccccCC----------CCceeecccHHHHHHHHHh---cCCC--CCHH----HHHHHHHHH-
Confidence 0011 1234799887754333221 2255689999999987542 1111 2222 333344432
Q ss_pred ccchhheeeEEeeeCCCCccccccccccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHH
Q psy886 679 GRDTLRCLGLATADNPLKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEA 758 (962)
Q Consensus 679 ~~~glRvl~~A~~~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~ 758 (962)
+.|=.-|+++ .|-.++|.+.+.|-++||.+|-+++||+.|||.+|+||||+.||.+
T Consensus 424 -~~GGTPL~V~-----------------------~~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~ 479 (681)
T COG2216 424 -RLGGTPLVVV-----------------------ENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAA 479 (681)
T ss_pred -hcCCCceEEE-----------------------ECCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHH
Confidence 3343333332 5678999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCC---------------------------CCccccCCCCCcCcEEEeccChhHHHHhhcccccccCChhHHHH
Q psy886 759 ICRRIGVFT---------------------------EEEDTTGKSYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVA 811 (962)
Q Consensus 759 IA~~~GI~~---------------------------~~~~~~g~~l~~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~ 811 (962)
||++.|+.+ +|+.++.++|.+||||+||.+||++||||+.||=+|.|...+.+
T Consensus 480 IA~EAGVDdfiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMNsGTqAAkEAaNMVDLDS~PTKlie 559 (681)
T COG2216 480 IAAEAGVDDFIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMVDLDSNPTKLIE 559 (681)
T ss_pred HHHHhCchhhhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhhccccHHHHHhhcccccCCCccceeh
Confidence 999999842 23456677899999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhC
Q psy886 812 AVEEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAALG 848 (962)
Q Consensus 812 ai~~gR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~ 848 (962)
.++.|+.+.-.=-....|+++..++--+.++-+.|..
T Consensus 560 vV~IGKqlLiTRGaLTTFSIANDvAKYFaIiPA~F~~ 596 (681)
T COG2216 560 VVEIGKQLLITRGALTTFSIANDVAKYFAIIPAMFAA 596 (681)
T ss_pred HhhhhhhheeecccceeeehhhHHHHHHHHHHHHHHh
Confidence 9999999776555555666666666555555555443
No 34
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=100.00 E-value=3.7e-33 Score=295.87 Aligned_cols=216 Identities=35% Similarity=0.542 Sum_probs=188.5
Q ss_pred hHHHHhHHHHHHHHHhcCCcc-ceeeeCCccceeeecccccCCCCEEEeCCCCeecceEEEEeecCCeEEEEecCCCCCC
Q psy886 229 VQLERNAESAIEALKEYEPEM-GKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGES 307 (962)
Q Consensus 229 ~~~e~ra~~~l~~L~~~~~~~-a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs 307 (962)
.+.++|+++.+++++++.+++ ++|+|+|+ ++++++++|+|||+|.+++||.+||||++++ ++.+.||||.+|||+
T Consensus 14 ~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~--~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~--~g~~~vd~s~ltGes 89 (230)
T PF00122_consen 14 IWQEYRSKKQLKKLNNLNPQKKVTVIRDGR--WQKIPSSELVPGDIIILKAGDIVPADGILLE--SGSAYVDESALTGES 89 (230)
T ss_dssp HHHHHHHHHHHHHHCTTSSSEEEEEEETTE--EEEEEGGGT-TTSEEEEETTEBESSEEEEEE--SSEEEEECHHHHSBS
T ss_pred HHHHHHHHHHHHHHhccCCCccEEEEeccc--cccchHhhccceeeeecccccccccCcccee--ccccccccccccccc
Confidence 568899999999999999998 99999997 8999999999999999999999999999996 589999999999999
Q ss_pred cceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEeccchhhHHHHhhccccccCCCchHHHHHHHHHHHHHHH
Q psy886 308 VSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVI 387 (962)
Q Consensus 308 ~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~T~~gki~~~~~~~~~~~tplq~~l~~~~~~l~~~~ 387 (962)
.|+.|.+. ..+.+|++|+||.+.+|+++++|++||.+|..|++.+.....+.+++++++.++++..++.+++
T Consensus 90 ~pv~k~~~--------~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (230)
T PF00122_consen 90 EPVKKTPL--------PLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIIII 161 (230)
T ss_dssp SEEEESSS--------CCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHHH
T ss_pred cccccccc--------cccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhcc
Confidence 99999854 3455799999999999999999999999999999999998888888999999999999999888
Q ss_pred HHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhhhcCccCCchhhhh
Q psy886 388 SIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVET 464 (962)
Q Consensus 388 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~Lp~~v~i~l~~~~~~m~k~~ilvr~~~~~E~ 464 (962)
++++++++++++.. ....+|.. .+..++++++.+||++||+++++++..++++|+++|+++|++.++|+
T Consensus 162 ~~~~~~~~~~~~~~----~~~~~~~~----~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 162 LAIAILVFIIWFFN----DSGISFFK----SFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNLSALEA 230 (230)
T ss_dssp HHHHHHHHHHCHTG----STTCHCCH----HHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESSTTHHHH
T ss_pred cccchhhhccceec----cccccccc----ccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeCcccccC
Confidence 88887777654321 12233433 57788999999999999999999999999999999999999999995
No 35
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=99.65 E-value=3.3e-16 Score=166.05 Aligned_cols=96 Identities=38% Similarity=0.626 Sum_probs=87.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCe-EEEEECCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecc
Q psy886 102 VILLILIANAIVGVWQERNAESAIEALKEYEPEM-GKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYST 180 (962)
Q Consensus 102 ~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~-~~v~r~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~ 180 (962)
+++++++++.+++.++++|+++.+++++++.+++ ++|+|||+ ++++++++|+|||+|.+++||++||||+|++ ++
T Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~--~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~--~g 76 (230)
T PF00122_consen 1 VILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGR--WQKIPSSELVPGDIIILKAGDIVPADGILLE--SG 76 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTE--EEEEEGGGT-TTSEEEEETTEBESSEEEEEE--SS
T ss_pred CEEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccc--cccchHhhccceeeeecccccccccCcccee--cc
Confidence 3567788899999999999999999999988887 99999998 8999999999999999999999999999997 46
Q ss_pred eeeeecccccCCCcceeecCC
Q psy886 181 TIRIDQSILTGESVSVIKHTD 201 (962)
Q Consensus 181 ~~~vdes~lTGEs~Pv~k~~g 201 (962)
.++||||+||||+.|+.|.+.
T Consensus 77 ~~~vd~s~ltGes~pv~k~~~ 97 (230)
T PF00122_consen 77 SAYVDESALTGESEPVKKTPL 97 (230)
T ss_dssp EEEEECHHHHSBSSEEEESSS
T ss_pred ccccccccccccccccccccc
Confidence 677999999999999999954
No 36
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=99.59 E-value=6.7e-15 Score=174.61 Aligned_cols=87 Identities=28% Similarity=0.438 Sum_probs=77.6
Q ss_pred cccccch--hHHHHhHHHHHHHHHhcCCc-cce-eeeCCccceeeecccccCCCCEEEeCCCCeecceEEEEeecCCeEE
Q psy886 222 EHKCGRM--VQLERNAESAIEALKEYEPE-MGK-VIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIR 297 (962)
Q Consensus 222 ~~~~gr~--~~~e~ra~~~l~~L~~~~~~-~a~-ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~ 297 (962)
+..+|+| .+.|+|+++++++|+++.|+ +++ |.|||+ +++|++++|+|||+|.+++||+|||||++++| ...
T Consensus 75 ~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~~v~rdg~--~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG---~~~ 149 (673)
T PRK14010 75 TLVFANFSEALAEGRGKAQANALRQTQTEMKARRIKQDGS--YEMIDASDLKKGHIVRVATGEQIPNDGKVIKG---LAT 149 (673)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEEeCCE--EEEEEHHHcCCCCEEEECCCCcccCCeEEEEc---ceE
Confidence 3456776 67899999999999999997 786 678987 79999999999999999999999999999974 458
Q ss_pred EEecCCCCCCcceecc
Q psy886 298 IDQSILTGESVSVIKH 313 (962)
Q Consensus 298 VdeS~LTGEs~pv~K~ 313 (962)
||||+|||||.|+.|.
T Consensus 150 VDESaLTGES~PV~K~ 165 (673)
T PRK14010 150 VDESAITGESAPVIKE 165 (673)
T ss_pred EecchhcCCCCceecc
Confidence 9999999999999983
No 37
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=99.59 E-value=2.9e-15 Score=132.65 Aligned_cols=91 Identities=35% Similarity=0.577 Sum_probs=71.5
Q ss_pred hhccCCccccccccCceEEecChhHHHHHHHHHHcCCCCcccCCCchhhHHHhhhhHHhhhceeeEeecCCCCCceEEEE
Q psy886 541 IMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSY 620 (962)
Q Consensus 541 ~lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvv 620 (962)
++||++.+..+.....++..|+|+|.||+.++.+.|.... ....+..|++++++||||+||||+++
T Consensus 1 ~LCn~a~~~~~~~~~~~~~~G~ptE~ALl~~~~~~g~~~~--------------~~~~~~~~~~~~~~pF~S~rK~msvv 66 (91)
T PF13246_consen 1 ALCNDAEIEYDDESKTEEIIGDPTEKALLRFAKKLGVGID--------------IKEIRSKYKIVAEIPFDSERKRMSVV 66 (91)
T ss_pred CCccccEeecCCCCccccccCCcCHHHHHHHHHHcCCCCc--------------HHHHHhhcceeEEEccCcccceeEEE
Confidence 4799998865543333448999999999999999864211 12367789999999999999999999
Q ss_pred EecCCCCCCCCCCCEEEEeCChHHHHhccccc
Q psy886 621 CTPLKSSKLGSSGPKLFVKGAPEGVLERCTHA 652 (962)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~ 652 (962)
++. + +.+.+|+|||||.||++|+++
T Consensus 67 ~~~-~------~~~~~~~KGA~e~il~~Ct~i 91 (91)
T PF13246_consen 67 VRN-D------GKYILYVKGAPEVILDRCTHI 91 (91)
T ss_pred EeC-C------CEEEEEcCCChHHHHHhcCCC
Confidence 981 1 146779999999999999863
No 38
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=99.55 E-value=5.7e-15 Score=174.38 Aligned_cols=96 Identities=40% Similarity=0.551 Sum_probs=87.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc--cCCCeEEEEECCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecce
Q psy886 104 LLILIANAIVGVWQERNAESAIEALKE--YEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTT 181 (962)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~l~~l~~--~~~~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~ 181 (962)
+++++++.+++.++++++++.+++|.+ +.|..++|+|+| +++||+++|+|||+|.+++||+|||||+|++| .
T Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g---~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g---~ 76 (499)
T TIGR01494 3 LILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG---WKEIPASDLVPGDIVLVKSGEIVPADGVLLSG---S 76 (499)
T ss_pred EEhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC---eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEc---c
Confidence 355677889999999999999999998 889999999988 58999999999999999999999999999987 4
Q ss_pred eeeecccccCCCcceeecCCCCCC
Q psy886 182 IRIDQSILTGESVSVIKHTDAVPD 205 (962)
Q Consensus 182 ~~vdes~lTGEs~Pv~k~~g~~~~ 205 (962)
+.||||+|||||.|+.|.+|+.+.
T Consensus 77 ~~vdes~LTGEs~pv~k~~g~~v~ 100 (499)
T TIGR01494 77 CFVDESNLTGESVPVLKTAGDAVF 100 (499)
T ss_pred EEEEcccccCCCCCeeeccCCccc
Confidence 559999999999999999987644
No 39
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=99.53 E-value=7.7e-14 Score=165.38 Aligned_cols=88 Identities=32% Similarity=0.457 Sum_probs=78.9
Q ss_pred cccccch--hHHHHhHHHHHHHHHhcCCcc-ceeee-CCccceeeecccccCCCCEEEeCCCCeecceEEEEeecCCeEE
Q psy886 222 EHKCGRM--VQLERNAESAIEALKEYEPEM-GKVIR-GDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIR 297 (962)
Q Consensus 222 ~~~~gr~--~~~e~ra~~~l~~L~~~~~~~-a~ViR-~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~ 297 (962)
...+|++ .+.|+|+++.+++|+++.|+. ++|+| +|+ +++|++++|+|||+|.+++||+|||||++++| .+.
T Consensus 76 ~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a~vlr~dg~--~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG---~~~ 150 (675)
T TIGR01497 76 TVLFANFAEAVAEGRGKAQADSLKGTKKTTFAKLLRDDGA--IDKVPADQLKKGDIVLVEAGDVIPCDGEVIEG---VAS 150 (675)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEeeCCE--EEEEEHHHCCCCCEEEECCCCEEeeeEEEEEc---cEE
Confidence 3567777 789999999999999999885 88986 675 79999999999999999999999999999964 678
Q ss_pred EEecCCCCCCcceeccC
Q psy886 298 IDQSILTGESVSVIKHT 314 (962)
Q Consensus 298 VdeS~LTGEs~pv~K~~ 314 (962)
||||+|||||.|+.|.+
T Consensus 151 VDESaLTGES~PV~K~~ 167 (675)
T TIGR01497 151 VDESAITGESAPVIKES 167 (675)
T ss_pred EEcccccCCCCceeecC
Confidence 99999999999999963
No 40
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=99.51 E-value=1.1e-13 Score=164.33 Aligned_cols=88 Identities=28% Similarity=0.431 Sum_probs=78.5
Q ss_pred cccccch--hHHHHhHHHHHHHHHhcCCc-cceeeeCCccceeeecccccCCCCEEEeCCCCeecceEEEEeecCCeEEE
Q psy886 222 EHKCGRM--VQLERNAESAIEALKEYEPE-MGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRI 298 (962)
Q Consensus 222 ~~~~gr~--~~~e~ra~~~l~~L~~~~~~-~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~V 298 (962)
+..+|++ .+.|+|+++.+++|+++.|+ +++|+|+|+. +++|++++|++||+|.+++||+|||||++++| ...|
T Consensus 75 ~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~vir~g~~-~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG---~a~V 150 (679)
T PRK01122 75 TVLFANFAEALAEGRGKAQADSLRGAKKDTFARKLREPGA-AEEVPATELRKGDIVLVEAGEIIPADGEVIEG---VASV 150 (679)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCE-EEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEc---cEEE
Confidence 3456666 68999999999999999996 7999998852 68999999999999999999999999999974 5789
Q ss_pred EecCCCCCCcceecc
Q psy886 299 DQSILTGESVSVIKH 313 (962)
Q Consensus 299 deS~LTGEs~pv~K~ 313 (962)
|||+|||||.|+.|.
T Consensus 151 DESaLTGES~PV~K~ 165 (679)
T PRK01122 151 DESAITGESAPVIRE 165 (679)
T ss_pred EcccccCCCCceEeC
Confidence 999999999999983
No 41
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=99.48 E-value=1.4e-13 Score=163.14 Aligned_cols=96 Identities=33% Similarity=0.493 Sum_probs=84.9
Q ss_pred cccccch--hHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEEEeCCCCeecceEEEEeecCCeEEEE
Q psy886 222 EHKCGRM--VQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRID 299 (962)
Q Consensus 222 ~~~~gr~--~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~Vd 299 (962)
...+|++ .+.++|+++.+++|+++.|++++|+|+|+ +++|++++|+|||+|.+++||+|||||++++ +.+.||
T Consensus 27 ~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~--~~~i~~~~l~~GDiv~v~~G~~iP~Dg~ii~---g~~~vd 101 (536)
T TIGR01512 27 LFSIGETLEEYASGRARRALKALMELAPDTARVLRGGS--LEEVAVEELKVGDVVVVKPGERVPVDGVVLS---GTSTVD 101 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCE--EEEEEHHHCCCCCEEEEcCCCEeecceEEEe---CcEEEE
Confidence 3456776 67999999999999999999999999997 7999999999999999999999999999996 457899
Q ss_pred ecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeece
Q psy886 300 QSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGK 341 (962)
Q Consensus 300 eS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~ 341 (962)
||+|||||.| -....|..+..|+
T Consensus 102 es~lTGEs~p-------------------v~k~~g~~v~aGt 124 (536)
T TIGR01512 102 ESALTGESVP-------------------VEKAPGDEVFAGA 124 (536)
T ss_pred ecccCCCCCc-------------------EEeCCCCEEEeee
Confidence 9999999975 2346788888877
No 42
>KOG0203|consensus
Probab=99.46 E-value=1.8e-14 Score=164.94 Aligned_cols=172 Identities=21% Similarity=0.266 Sum_probs=126.5
Q ss_pred HHhhhhhhccCccccCCCChhHH----HH---HHHHHHHHHHHHHHHHhhhccccccccccchhHHHHHHHHHHHHHHHH
Q psy886 42 LRLRQIDFIPARVTSLSPSENVH----IA---STNFAVLFCLCPQVLALFEEHEDFNSTLTSFVEPFVILLILIANAIVG 114 (962)
Q Consensus 42 ~~~~~~~~g~~~~~~~~~~~~~~----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 114 (962)
.-.....-|+|.+..++....+. .. ...+++..+..+++.+.+..........++...++++..++++..+..
T Consensus 64 A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~~a~l~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~~~ 143 (1019)
T KOG0203|consen 64 AAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWIGAILCFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGLFS 143 (1019)
T ss_pred HHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEecCC
Confidence 33444456788876666432222 11 334445555556555544333222233445566777777788888999
Q ss_pred HHHHHHHHHHHHHHhccCCCeEEEEECCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeecccccCCCc
Q psy886 115 VWQERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESV 194 (962)
Q Consensus 115 ~~~~~~~~~~l~~l~~~~~~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lTGEs~ 194 (962)
++|+.++.+.+++..++.|..++|+|||. ...+.+++|++||+|.++-||+||||.++++ +..++||+|+|||||+
T Consensus 144 ~~qe~ks~~im~sF~~l~P~~~~ViRdg~--k~~i~~eelVvGD~v~vk~GdrVPADiRiis--~~g~~vdnsslTGesE 219 (1019)
T KOG0203|consen 144 YYQEAKSSKIMDSFKNLVPQQALVIRDGE--KMTINAEELVVGDLVEVKGGDRVPADIRIIS--ATGCKVDNSSLTGESE 219 (1019)
T ss_pred CccchhhHHHHHHHhccchhhheeeecce--eEEechhhcccccceeeccCCcccceeEEEE--ecceeEeccccccccC
Confidence 99999999999999999999999999998 7999999999999999999999999999997 7789999999999999
Q ss_pred ceeecCCCCCCcccccCCCcccccc
Q psy886 195 SVIKHTDAVPDPRAEKNGPQMCEND 219 (962)
Q Consensus 195 Pv~k~~g~~~~~~~~~~~~~~~~~~ 219 (962)
|.++.+.-...-. ....++|.+.
T Consensus 220 P~~~~~~~t~~~~--~Et~Ni~f~s 242 (1019)
T KOG0203|consen 220 PQTRSPEFTHENP--LETRNIAFFS 242 (1019)
T ss_pred CccCCccccccCc--hhheeeeeee
Confidence 9999876443322 3344444433
No 43
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=99.46 E-value=2e-13 Score=162.50 Aligned_cols=99 Identities=33% Similarity=0.488 Sum_probs=88.6
Q ss_pred ccccccch--hHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEEEeCCCCeecceEEEEeecCCeEEE
Q psy886 221 NEHKCGRM--VQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRI 298 (962)
Q Consensus 221 ~~~~~gr~--~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~V 298 (962)
....+||| .+.++|+++.+++|.++.|++++++|+++. +++|++++|+|||+|.+++||+|||||++++ +.+.|
T Consensus 62 ~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~-~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~---g~~~v 137 (562)
T TIGR01511 62 TFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGS-IEEVPVALLQPGDIVKVLPGEKIPVDGTVIE---GESEV 137 (562)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCe-EEEEEHHHCCCCCEEEECCCCEecCceEEEE---CceEE
Confidence 56778888 678899999999999999999999997542 6899999999999999999999999999996 45689
Q ss_pred EecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceE
Q psy886 299 DQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKA 342 (962)
Q Consensus 299 deS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~ 342 (962)
|||+|||||.|+.| ..|..|..|+.
T Consensus 138 des~lTGEs~pv~k-------------------~~gd~V~aGt~ 162 (562)
T TIGR01511 138 DESLVTGESLPVPK-------------------KVGDPVIAGTV 162 (562)
T ss_pred ehHhhcCCCCcEEc-------------------CCCCEEEeeeE
Confidence 99999999999987 67888888873
No 44
>PRK10671 copA copper exporting ATPase; Provisional
Probab=99.45 E-value=2.3e-13 Score=169.90 Aligned_cols=99 Identities=24% Similarity=0.460 Sum_probs=90.8
Q ss_pred ccccccch--hHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEEEeCCCCeecceEEEEeecCCeEEE
Q psy886 221 NEHKCGRM--VQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRI 298 (962)
Q Consensus 221 ~~~~~gr~--~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~V 298 (962)
.+..+||| .+.++|+.+++++|.++.|++++|+|+|+ +++|+.++|+|||+|++++||+|||||++++ +...|
T Consensus 294 ~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~--~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~---g~~~v 368 (834)
T PRK10671 294 GLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEG--EKSVPLADVQPGMLLRLTTGDRVPVDGEITQ---GEAWL 368 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCc--EEEEEHHHcCCCCEEEEcCCCEeeeeEEEEE---ceEEE
Confidence 57789999 78999999999999999999999999987 6899999999999999999999999999996 45789
Q ss_pred EecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceEE
Q psy886 299 DQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKAR 343 (962)
Q Consensus 299 deS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~ 343 (962)
|||+|||||.|+.| -.|..|..|+..
T Consensus 369 deS~lTGEs~pv~k-------------------~~gd~V~aGt~~ 394 (834)
T PRK10671 369 DEAMLTGEPIPQQK-------------------GEGDSVHAGTVV 394 (834)
T ss_pred eehhhcCCCCCEec-------------------CCCCEEEeccee
Confidence 99999999999987 678888888754
No 45
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=99.44 E-value=4.3e-13 Score=160.04 Aligned_cols=79 Identities=32% Similarity=0.434 Sum_probs=71.4
Q ss_pred ccccccch--hHHHHhHHHHHHHHHhcCCccceeeeCC-ccceeeecccccCCCCEEEeCCCCeecceEEEEeecCCeEE
Q psy886 221 NEHKCGRM--VQLERNAESAIEALKEYEPEMGKVIRGD-KSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIR 297 (962)
Q Consensus 221 ~~~~~gr~--~~~e~ra~~~l~~L~~~~~~~a~ViR~g-~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~ 297 (962)
....+|++ .+.++|+++.+++|.++.|++++|+|+| + +++|++++|+|||+|.+++||.|||||++++| .+.
T Consensus 26 ~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~--~~~i~~~~l~~GDiv~v~~G~~iP~Dg~vi~g---~~~ 100 (556)
T TIGR01525 26 FLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGS--EEEVPVEELQVGDIVIVRPGERIPVDGVVISG---ESE 100 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCe--EEEEEHHHCCCCCEEEECCCCEeccceEEEec---ceE
Confidence 34566777 6799999999999999999999999996 5 78999999999999999999999999999964 578
Q ss_pred EEecCCC
Q psy886 298 IDQSILT 304 (962)
Q Consensus 298 VdeS~LT 304 (962)
||||+||
T Consensus 101 vdes~lT 107 (556)
T TIGR01525 101 VDESALT 107 (556)
T ss_pred Eeehhcc
Confidence 9999998
No 46
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=99.42 E-value=4.6e-13 Score=159.16 Aligned_cols=99 Identities=36% Similarity=0.497 Sum_probs=89.2
Q ss_pred ccccccch--hHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEEEeCCCCeecceEEEEeecCCeEEE
Q psy886 221 NEHKCGRM--VQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRI 298 (962)
Q Consensus 221 ~~~~~gr~--~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~V 298 (962)
.+..+||| .+...|+.+++++|.++.|++|++++++.. +++|+.++|++||+|.+++||+||+||++++|+ -.|
T Consensus 182 ~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~-~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~G~---s~v 257 (713)
T COG2217 182 FLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGE-EEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGS---SSV 257 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCc-EEEEEHHHCCCCCEEEECCCCEecCCeEEEeCc---EEe
Confidence 57788998 889999999999999999999988886433 799999999999999999999999999999654 459
Q ss_pred EecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceE
Q psy886 299 DQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKA 342 (962)
Q Consensus 299 deS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~ 342 (962)
|||+|||||.|+.| -.|..|..|+.
T Consensus 258 DeS~iTGEs~PV~k-------------------~~Gd~V~aGti 282 (713)
T COG2217 258 DESMLTGESLPVEK-------------------KPGDEVFAGTV 282 (713)
T ss_pred ecchhhCCCCCEec-------------------CCCCEEeeeEE
Confidence 99999999999987 78889988874
No 47
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=99.42 E-value=3.6e-13 Score=164.80 Aligned_cols=98 Identities=30% Similarity=0.432 Sum_probs=86.8
Q ss_pred ccccccch--hHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEEEeCCCCeecceEEEEeecCCeEEE
Q psy886 221 NEHKCGRM--VQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRI 298 (962)
Q Consensus 221 ~~~~~gr~--~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~V 298 (962)
....+|++ .+.++|+++.+++|.++.|++++|+|+|+ +++|++++|+|||+|++++||+|||||++++| ...|
T Consensus 214 ~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~--~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g---~~~v 288 (741)
T PRK11033 214 LLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGE--REEVAIADLRPGDVIEVAAGGRLPADGKLLSP---FASF 288 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCE--EEEEEHHHCCCCCEEEECCCCEEecceEEEEC---cEEe
Confidence 56678888 78999999999999999999999999997 78999999999999999999999999999964 5689
Q ss_pred EecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceE
Q psy886 299 DQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKA 342 (962)
Q Consensus 299 deS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~ 342 (962)
|||+|||||.| -....|..|..|+.
T Consensus 289 des~lTGEs~P-------------------v~k~~Gd~V~aGt~ 313 (741)
T PRK11033 289 DESALTGESIP-------------------VERATGEKVPAGAT 313 (741)
T ss_pred ecccccCCCCC-------------------EecCCCCeeccCCE
Confidence 99999999975 22466888888763
No 48
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.35 E-value=4.7e-12 Score=132.61 Aligned_cols=53 Identities=42% Similarity=0.815 Sum_probs=51.7
Q ss_pred CeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 714 NLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 714 ~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
++.++|.+.+.||||++++++|+.|+++||+++|+|||+..+|.++|+++||.
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~ 167 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIF 167 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSC
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccc
Confidence 78999999999999999999999999999999999999999999999999994
No 49
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=99.33 E-value=2e-12 Score=163.00 Aligned_cols=124 Identities=26% Similarity=0.366 Sum_probs=92.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEEC
Q psy886 62 NVHIASTNFAVLFCLCPQVLALFEEHEDFNSTLTSFVEPFVILLILIANAIVGVWQERNAESAIEALKEYEPEMGKVIRG 141 (962)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~r~ 141 (962)
.....+..++++++++++++..|.. ... .++++++-.+-.+++.+...|+-++++++........|=-+.
T Consensus 59 q~~~~~~~iL~~aails~~~~~~~~---------~~i-Il~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRdg~~ 128 (1053)
T TIGR01523 59 QVCNAMCMVLIIAAAISFAMHDWIE---------GGV-ISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKS 128 (1053)
T ss_pred HHhCHHHHHHHHHHHHHHHHhhHHH---------HHH-HHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCee
Confidence 3334456777777788877766532 133 334444444445666667778888999988877766664444
Q ss_pred CCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeecccccCCCcceeecCCC
Q psy886 142 DKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDA 202 (962)
Q Consensus 142 ~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lTGEs~Pv~k~~g~ 202 (962)
-.. +++||||||+|.|++||+|||||+|++ +.++.||||+|||||.||.|.+..
T Consensus 129 ~~I-----~a~eLVpGDIv~L~~Gd~VPAD~rLi~--~~~L~VDES~LTGES~pV~K~~~~ 182 (1053)
T TIGR01523 129 DAI-----DSHDLVPGDICLLKTGDTIPADLRLIE--TKNFDTDEALLTGESLPVIKDAHA 182 (1053)
T ss_pred eec-----CHhhCCCCCEEEECCCCEeeccEEEEE--eCceEEEchhhcCCCCceeccccc
Confidence 343 678999999999999999999999998 567999999999999999998753
No 50
>KOG0207|consensus
Probab=99.33 E-value=1.8e-12 Score=151.09 Aligned_cols=100 Identities=28% Similarity=0.428 Sum_probs=92.6
Q ss_pred ccccccch--hHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEEEeCCCCeecceEEEEeecCCeEEE
Q psy886 221 NEHKCGRM--VQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRI 298 (962)
Q Consensus 221 ~~~~~gr~--~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~V 298 (962)
.++.+||| .+..+|+..++..|..+.|.+|.++.+|++ +++|+.+.|.+||+|.+.+|++||+||++++ |+.+|
T Consensus 349 ~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~-e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~---Gss~V 424 (951)
T KOG0207|consen 349 TFITLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSE-EKEIPVDLVQVGDIVKVKPGEKIPVDGVVVD---GSSEV 424 (951)
T ss_pred HHHHHHHHHHHHhhccchHHHHHHhhcCcccceEeecCCc-ceEeeeeeeccCCEEEECCCCccccccEEEe---Cceee
Confidence 57889999 889999999999999999999999999975 6899999999999999999999999999996 45679
Q ss_pred EecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceEE
Q psy886 299 DQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKAR 343 (962)
Q Consensus 299 deS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~ 343 (962)
|||.+|||++||.| -.|+.|..|+.-
T Consensus 425 DEs~iTGEs~PV~K-------------------k~gs~ViaGsiN 450 (951)
T KOG0207|consen 425 DESLITGESMPVPK-------------------KKGSTVIAGSIN 450 (951)
T ss_pred chhhccCCceeccc-------------------CCCCeeeeeeec
Confidence 99999999999988 899999999743
No 51
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=99.32 E-value=2.2e-12 Score=161.49 Aligned_cols=114 Identities=19% Similarity=0.251 Sum_probs=75.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeE-----EEE
Q psy886 65 IASTNFAVLFCLCPQVLALFEEHEDFNSTLTSFVEPFVILLILIANAIVGVWQERNAESAIEALKEYEPEMG-----KVI 139 (962)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~-----~v~ 139 (962)
.....+++++++++++++.|... ....+++++.. +..+++.+...++-+++.++........ ..+
T Consensus 61 ~~~~~~L~~aa~ls~~~g~~~~~---------~~i~~~i~~~~-~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I 130 (884)
T TIGR01522 61 NPLILLLIASAVISVFMGNIDDA---------VSITLAILIVV-TVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHV 130 (884)
T ss_pred ChHHHHHHHHHHHHHHHcchhhH---------HHHHhHHHHHH-HHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEE
Confidence 34466677777777777777432 33334444444 4445566677788888888754433222 222
Q ss_pred E-----CCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeecccccCCCcceeecCCCCCC
Q psy886 140 R-----GDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPD 205 (962)
Q Consensus 140 r-----~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lTGEs~Pv~k~~g~~~~ 205 (962)
. -|. ...+...|..|-|.++++..+ +.||||+|||||.|+.|.+++.+.
T Consensus 131 ~~~eLv~GD--iv~l~~Gd~IPaDg~ii~g~~---------------l~VDES~LTGES~pv~K~~~~~~~ 184 (884)
T TIGR01522 131 LASTLVPGD--LVCLSVGDRVPADLRIVEAVD---------------LSIDESNLTGETTPVSKVTAPIPA 184 (884)
T ss_pred EHHHCccCC--EEEecCCCEEeeeEEEEEcCc---------------eEEEcccccCCCcceecccccccc
Confidence 1 244 688888999999999997643 229999999999999999986543
No 52
>KOG0208|consensus
Probab=99.28 E-value=1.4e-11 Score=143.73 Aligned_cols=81 Identities=32% Similarity=0.376 Sum_probs=69.1
Q ss_pred HHHhHHHHHHHHHhcCCc--cceeeeCCccceeeecccccCCCCEEEeCC-CCeecceEEEEeecCCeEEEEecCCCCCC
Q psy886 231 LERNAESAIEALKEYEPE--MGKVIRGDKSGVQKVRAKEIVPGDIVEVSV-GDKIPADIRLIKIYSTTIRIDQSILTGES 307 (962)
Q Consensus 231 ~e~ra~~~l~~L~~~~~~--~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~-Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs 307 (962)
+-|..++.-..|++|... .++|+|+|. |++|.++|||||||+++.+ |-..|||++|+ +++|.||||+|||||
T Consensus 231 sv~e~r~qs~rlr~mv~~~~~V~V~R~g~--~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li---~g~civNEsmLTGES 305 (1140)
T KOG0208|consen 231 SVYETRKQSIRLRSMVKFTCPVTVIRDGF--WETVDSSELVPGDILYIPPPGKIMPCDALLI---SGDCIVNESMLTGES 305 (1140)
T ss_pred HHHHHHHHHHHHHHHhcCCceEEEEECCE--EEEEeccccccccEEEECCCCeEeecceEEE---eCcEEeecccccCCc
Confidence 444455555566666654 578999987 8999999999999999998 99999999999 678999999999999
Q ss_pred cceeccCCC
Q psy886 308 VSVIKHTDA 316 (962)
Q Consensus 308 ~pv~K~~~~ 316 (962)
.|+.|.+.+
T Consensus 306 VPv~K~~l~ 314 (1140)
T KOG0208|consen 306 VPVTKTPLP 314 (1140)
T ss_pred ccccccCCc
Confidence 999999865
No 53
>KOG0202|consensus
Probab=99.28 E-value=1.7e-12 Score=149.28 Aligned_cols=92 Identities=45% Similarity=0.629 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeee
Q psy886 106 ILIANAIVGVWQERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRID 185 (962)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vd 185 (962)
+.....+.+.+...|+-++|++|..-..+..|--+-.. +++.||||||||.|+-||+||||-+|++ ..++.||
T Consensus 90 ~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~gk~~~-----i~A~eLVPGDiV~l~vGDkVPADlRl~e--~~sl~iD 162 (972)
T KOG0202|consen 90 INVTVGFVQEYNAEKALEALKELVPPMAHVLRSGKLQH-----ILARELVPGDIVELKVGDKIPADLRLIE--AKSLRID 162 (972)
T ss_pred eeeeeeeeeehhhHHHHHHHHhcCCccceEEecCcccc-----eehhccCCCCEEEEecCCccccceeEEe--eeeeeee
Confidence 33334466666777899999999887777777777777 7999999999999999999999999998 6669999
Q ss_pred cccccCCCcceeecCCCCC
Q psy886 186 QSILTGESVSVIKHTDAVP 204 (962)
Q Consensus 186 es~lTGEs~Pv~k~~g~~~ 204 (962)
||+|||||.||.|.....+
T Consensus 163 eS~LTGEs~pv~K~t~~v~ 181 (972)
T KOG0202|consen 163 ESSLTGESEPVSKDTDAVP 181 (972)
T ss_pred cccccCCcccccccCcccc
Confidence 9999999999999887766
No 54
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=99.19 E-value=9.2e-11 Score=149.86 Aligned_cols=211 Identities=15% Similarity=0.140 Sum_probs=126.2
Q ss_pred hHHHHhHHHHHHHHHhcCCccceeeeC-CccceeeecccccCCCCEEEeCCCCeecceEEEEeecC--CeEEEEecCCCC
Q psy886 229 VQLERNAESAIEALKEYEPEMGKVIRG-DKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYS--TTIRIDQSILTG 305 (962)
Q Consensus 229 ~~~e~ra~~~l~~L~~~~~~~a~ViR~-g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~--~~l~VdeS~LTG 305 (962)
...+++..++-. +..++.++|+|+ |+ +++++|+||+|||+|++++||+||||+++++++. +.+.||||+|||
T Consensus 69 ~~ed~~r~~~d~---~~n~~~~~v~~~~~~--~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~G 143 (1057)
T TIGR01652 69 AIEDIRRRRRDK---EVNNRLTEVLEGHGQ--FVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDG 143 (1057)
T ss_pred HHHHHHHHHhHH---HHhCcEEEEECCCCc--EEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCC
Confidence 334444444433 356789999997 55 8999999999999999999999999999997543 669999999999
Q ss_pred CCcceeccCCCCCCCc--------------cCCCCCcceEecCceeeec-eE----------EE-EEE----Eeccchhh
Q psy886 306 ESVSVIKHTDAVPDPR--------------AVNQDKKNILFSGTNVAAG-KA----------RG-IVM----GTGLNTAI 355 (962)
Q Consensus 306 Es~pv~K~~~~~~~~~--------------~~~~~~~n~v~aGT~v~~G-~~----------~~-vV~----~tG~~T~~ 355 (962)
||.|+.|.+.+..... ....+.+-..|.|+....+ .. +| .|. ..|.-..-
T Consensus 144 Es~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyT 223 (1057)
T TIGR01652 144 ETNLKLRQALEETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYT 223 (1057)
T ss_pred eecceEeecchhhhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEE
Confidence 9999999864321100 0001112246888887655 10 11 222 23444445
Q ss_pred HHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHH-----------HHHHHHHH
Q psy886 356 GKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSWIKGAV-----------YYFKIAVA 424 (962)
Q Consensus 356 gki~~~~~~~~~~~tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-----------~~~~~~i~ 424 (962)
|+=.+........+.+ ...+++....++.+++++.+++.++....... .........+. ..+...+.
T Consensus 224 G~~Tk~~~n~~~~~~k-~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~-~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 301 (1057)
T TIGR01652 224 GHDTKLMRNATQAPSK-RSRLEKELNFLIIILFCLLFVLCLISSVGAGI-WNDAHGKDLWYIRLDVSERNAAANGFFSFL 301 (1057)
T ss_pred chhhhhhhcCCCCccc-ccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHh-eecccCCCccceecCcccccchhHHHHHHH
Confidence 6666665544333222 34677777777666665555554443221110 11111111110 11233455
Q ss_pred HHHhhcCCchHHHHHHHHHHHH
Q psy886 425 LAVAAIPEGLPAVITTCLALGT 446 (962)
Q Consensus 425 l~v~~iP~~Lp~~v~i~l~~~~ 446 (962)
.++...+..+|..+.+++.+..
T Consensus 302 ~~~~L~~~~IPisL~v~l~l~~ 323 (1057)
T TIGR01652 302 TFLILFSSLIPISLYVSLELVK 323 (1057)
T ss_pred HHHHHHhhhcceeeeehHHHHH
Confidence 5666677777777777776663
No 55
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=99.13 E-value=5.8e-11 Score=148.31 Aligned_cols=94 Identities=30% Similarity=0.450 Sum_probs=72.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEE--ECCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeec
Q psy886 102 VILLILIANAIVGVWQERNAESAIEALKEYEPEMGKVI--RGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYS 179 (962)
Q Consensus 102 ~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~--r~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~ 179 (962)
++++-.+ ..+.+.++..++-++++++.+......|-- ..-. ++||+|||+|.+++||+||||++|+++++
T Consensus 112 ~i~~n~~-~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~-------a~eLVpGDiV~l~~gd~vPAD~rLl~~~~ 183 (917)
T COG0474 112 VVVINAL-LGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIP-------ASELVPGDIVLLEAGDVVPADLRLLESSD 183 (917)
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEec-------HHHCCCCcEEEECCCCccccceEEEEecC
Confidence 3333333 348888899999999998877665544411 1111 25899999999999999999999999655
Q ss_pred ceeeeecccccCCCcceeecCCCCCC
Q psy886 180 TTIRIDQSILTGESVSVIKHTDAVPD 205 (962)
Q Consensus 180 ~~~~vdes~lTGEs~Pv~k~~g~~~~ 205 (962)
++||||+|||||.|++|.+.....
T Consensus 184 --l~VdEs~LTGES~pv~K~~~~~~~ 207 (917)
T COG0474 184 --LEVDESALTGESLPVEKQALPLTK 207 (917)
T ss_pred --ceEEcccccCCCcchhcccccccc
Confidence 689999999999999999875543
No 56
>KOG0205|consensus
Probab=99.11 E-value=4e-11 Score=133.73 Aligned_cols=97 Identities=33% Similarity=0.401 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecc
Q psy886 101 FVILLILIANAIVGVWQERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYST 180 (962)
Q Consensus 101 ~~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~ 180 (962)
+.++++=..-.+++.++...+-.++.+-........+--+=++. +- ++||||||+.++.|+.|||||+|++|.
T Consensus 104 ~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVlRDGkw~E~-eA----s~lVPGDIlsik~GdIiPaDaRLl~gD-- 176 (942)
T KOG0205|consen 104 CCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLRDGKWSEQ-EA----SILVPGDILSIKLGDIIPADARLLEGD-- 176 (942)
T ss_pred heeeeecceeeeeeccccchHHHHHHhccCcccEEeecCeeeee-ec----cccccCceeeeccCCEecCccceecCC--
Confidence 33333333333556666666666666554545544443322221 11 469999999999999999999999975
Q ss_pred eeeeecccccCCCcceeecCCCCC
Q psy886 181 TIRIDQSILTGESVSVIKHTDAVP 204 (962)
Q Consensus 181 ~~~vdes~lTGEs~Pv~k~~g~~~ 204 (962)
.++||||+|||||.||.|.+||.-
T Consensus 177 ~LkiDQSAlTGESLpvtKh~gd~v 200 (942)
T KOG0205|consen 177 PLKIDQSALTGESLPVTKHPGDEV 200 (942)
T ss_pred ccccchhhhcCCccccccCCCCce
Confidence 799999999999999999999853
No 57
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=99.09 E-value=2e-10 Score=145.31 Aligned_cols=91 Identities=21% Similarity=0.221 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC-----eEEEEECCCccEEEEeCCCCCCCCEEEEcCCCccCCCceE
Q psy886 100 PFVILLILIANAIVGVWQERNAESAIEALKEYEPE-----MGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRL 174 (962)
Q Consensus 100 ~~~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~-----~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v 174 (962)
.++++++-.+-.+.+.++.+++.+++.++...... ....+.-.. .+.=+.=.|.+||+ |||||+|
T Consensus 110 i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~--lv~GDiv~l~~Gd~--------IPaD~~i 179 (997)
T TIGR01106 110 LSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQ--VVVGDLVEVKGGDR--------IPADLRI 179 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHH--CCCCCEEEECCCCE--------EeeeEEE
Confidence 34444445555666777788888888877443222 111211111 00001123457885 6999999
Q ss_pred EeeecceeeeecccccCCCcceeecCCC
Q psy886 175 IKIYSTTIRIDQSILTGESVSVIKHTDA 202 (962)
Q Consensus 175 ~~G~~~~~~vdes~lTGEs~Pv~k~~g~ 202 (962)
++|. .+.||||+|||||.|+.|.+++
T Consensus 180 l~~~--~l~VdeS~LTGES~pv~K~~~~ 205 (997)
T TIGR01106 180 ISAQ--GCKVDNSSLTGESEPQTRSPEF 205 (997)
T ss_pred EEcc--CcEEEccccCCCCCceeccCCC
Confidence 9853 4779999999999999998874
No 58
>PLN03190 aminophospholipid translocase; Provisional
Probab=99.03 E-value=1.3e-09 Score=138.15 Aligned_cols=150 Identities=18% Similarity=0.253 Sum_probs=97.7
Q ss_pred cCCccceeeeCCccceeeecccccCCCCEEEeCCCCeecceEEEEeecC--CeEEEEecCCCCCCcceeccCCCCCC---
Q psy886 245 YEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYS--TTIRIDQSILTGESVSVIKHTDAVPD--- 319 (962)
Q Consensus 245 ~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~--~~l~VdeS~LTGEs~pv~K~~~~~~~--- 319 (962)
..+..++|+|+|+ +++++|++|+|||+|++++||++|||+++++++. +.++||||+|||||.|+.|.+.....
T Consensus 168 ~N~~~~~v~~~~~--~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~~~~~~~~~ 245 (1178)
T PLN03190 168 ENNRLAWVLVDDQ--FQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQETLSKI 245 (1178)
T ss_pred hcCcEEEEEECCe--EEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEecccchhhhcc
Confidence 3567899999987 7899999999999999999999999999997543 67999999999999999998653211
Q ss_pred -Cc----------cC----CCCCcceEecCceeeece----EEEEE-----EEeccchhhHHHHhhccccccCCCchHHH
Q psy886 320 -PR----------AV----NQDKKNILFSGTNVAAGK----ARGIV-----MGTGLNTAIGKIRTEMSETEEIKTPLQQK 375 (962)
Q Consensus 320 -~~----------~~----~~~~~n~v~aGT~v~~G~----~~~vV-----~~tG~~T~~gki~~~~~~~~~~~tplq~~ 375 (962)
.. .+ ....+++.+.|+.+.-|. .+|.+ -..|--..-|+=.+.+......+. -...
T Consensus 246 ~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK~~~N~~~~~~-K~S~ 324 (1178)
T PLN03190 246 PEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETKAMLNNSGAPS-KRSR 324 (1178)
T ss_pred hhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhhhHhhcCCCCCC-CccH
Confidence 00 00 112234444444332221 11111 124444455766665555444333 3456
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q psy886 376 LDEFGEQLSKVISIICVAVWAI 397 (962)
Q Consensus 376 l~~~~~~l~~~~~~~~~~~~~i 397 (962)
+++....++.+++++.+++.++
T Consensus 325 le~~~N~~vi~l~~i~~~l~~i 346 (1178)
T PLN03190 325 LETRMNLEIIILSLFLIALCTI 346 (1178)
T ss_pred HHHHHhHHHHHHHHHHHHHHHH
Confidence 7777777776655555544444
No 59
>KOG4383|consensus
Probab=98.94 E-value=5.5e-07 Score=101.16 Aligned_cols=238 Identities=19% Similarity=0.256 Sum_probs=166.9
Q ss_pred CChHHHHhcccccccCCeeeeCCHHHHHHHHHHHHHHhcccchhheeeEEeeeCC---------------CCccc-----
Q psy886 640 GAPEGVLERCTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNP---------------LKPED----- 699 (962)
Q Consensus 640 GA~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~glRvl~~A~~~~~---------------~~~~~----- 699 (962)
|-.+.+.+.|++.+.+.+..|++...|.++.+.+..-. -.=.|+|||||+.. ..++.
T Consensus 698 g~ad~~~eACTdfWdGadi~PlSg~dkkkV~DFY~Rac---lsG~C~AfaYkP~~caLasqL~GKciEl~~~p~~SkI~T 774 (1354)
T KOG4383|consen 698 GFADFFEEACTDFWDGADIIPLSGRDKKKVKDFYLRAC---LSGHCLAFAYKPCFCALASQLAGKCIELPLNPEHSKIET 774 (1354)
T ss_pred cHHHHHHHHhhhhcCCceeeecCcchHHHHHHHHHHHh---hcccchheecccHHHHHHHHhCCceEEeccCcccchhhh
Confidence 55678889999999999999999999999988876643 23358999998521 11100
Q ss_pred -----------------ccccc--------ccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEcCCCHH
Q psy886 700 -----------------MNLAD--------STKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKA 754 (962)
Q Consensus 700 -----------------~~~~~--------~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~ 754 (962)
.+..+ .+.....-.+-.|.|++...-++|++....|+.|-+|-||.+-.+-.+..
T Consensus 775 ~celp~sipikqnar~S~~e~Degige~l~~e~c~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdEL 854 (1354)
T KOG4383|consen 775 ACELPHSIPIKQNARESFDEIDEGIGERLADEACDQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDEL 854 (1354)
T ss_pred hccCCCCCcchhhhhhhhhhhccccceeccHhHHHHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHH
Confidence 00000 00011122567899999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCC---------CccccCCC-------------------------------C-----------------
Q psy886 755 TAEAICRRIGVFTE---------EEDTTGKS-------------------------------Y----------------- 777 (962)
Q Consensus 755 TA~~IA~~~GI~~~---------~~~~~g~~-------------------------------l----------------- 777 (962)
..+-.|.++||-.+ ++..-|.+ +
T Consensus 855 kSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~ds 934 (1354)
T KOG4383|consen 855 KSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDS 934 (1354)
T ss_pred HHHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhhccCcchhHHHHHhhhcccccceeehhhcccCCcccccccc
Confidence 99999999999431 11110000 0
Q ss_pred ---------------------------------------------------------------------------CcCcE
Q psy886 778 ---------------------------------------------------------------------------SKAEI 782 (962)
Q Consensus 778 ---------------------------------------------------------------------------~~AdV 782 (962)
.+|||
T Consensus 935 di~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTDcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadI 1014 (1354)
T KOG4383|consen 935 DIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTDCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADI 1014 (1354)
T ss_pred chhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccCCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccce
Confidence 18999
Q ss_pred EEecc--------------ChhHHHHhh-----------------cccccccCChhHHHHHHHHhHHHHHHHHHHHHHHH
Q psy886 783 GIAMG--------------SGTAVAKSA-----------------SEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLI 831 (962)
Q Consensus 783 GIAmg--------------~gtdvAkea-----------------ADivL~dd~f~~iv~ai~~gR~i~~ni~k~i~~~l 831 (962)
+||+- ..+---.+| .|.-+-...+-+|...|+.+|....-+|+.+.|.|
T Consensus 1015 SialD~l~~~~C~~e~fg~assismaqandglsplQiSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiL 1094 (1354)
T KOG4383|consen 1015 SIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFIL 1094 (1354)
T ss_pred eEEeccCCCccceecccccchhhhhhhhcCCCCceeecccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 99862 111111122 23333334456889999999999999999999999
Q ss_pred HhhHHHHHHHHHHHHhCCCccchhHH-HhhC--cccccccc---cCCCCcCccch
Q psy886 832 SSNIGEVVSIFLTAALGLPEALIKKI-STTN--RGKKKKLS---YNFLDISLLGP 880 (962)
Q Consensus 832 ~~ni~~~~~~~~~~~~~~~~pl~~~q-L~~d--~~~a~al~---~e~~~~~~m~~ 880 (962)
-......++++++.++.+|..|+-.| +.+. -.|-+.++ ..+|.+.+|.+
T Consensus 1095 q~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc~PlL~i~tL~gk~~hkSii~m 1149 (1354)
T KOG4383|consen 1095 QAQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFCIPLLFIGTLFGKFEHKSIIIM 1149 (1354)
T ss_pred HHHHHHHHHHHHHHHHhccchhccchHHHHHHHHHHHHHHHHHhcCCCccceEEe
Confidence 99999999999999999998888877 3111 23334433 45666666544
No 60
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=98.91 E-value=2.9e-09 Score=116.61 Aligned_cols=81 Identities=32% Similarity=0.541 Sum_probs=67.7
Q ss_pred HHHHhHHHHHHHHHhcCCc-cceeeeCCccceeeecccccCCCCEEEeCCCCeecceEEEEeecCCeEEEEecCCCCCCc
Q psy886 230 QLERNAESAIEALKEYEPE-MGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESV 308 (962)
Q Consensus 230 ~~e~ra~~~l~~L~~~~~~-~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~ 308 (962)
..|.|.+..-++|++.... .++++++.. +++.+++.+|+.||+|++++||.||+||.+++| ...||||++||||.
T Consensus 85 ~AEGrgKAqAdsLr~~~~~~~A~~l~~~g-~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG---~asVdESAITGESa 160 (681)
T COG2216 85 VAEGRGKAQADSLRKTKTETIARLLRADG-SIEMVPATELKKGDIVLVEAGEIIPSDGEVIEG---VASVDESAITGESA 160 (681)
T ss_pred HHcccchHHHHHHHHHHHHHHHHHhcCCC-CeeeccccccccCCEEEEecCCCccCCCeEEee---eeecchhhccCCCc
Confidence 3566666667777776654 578888753 389999999999999999999999999999975 45699999999999
Q ss_pred ceeccC
Q psy886 309 SVIKHT 314 (962)
Q Consensus 309 pv~K~~ 314 (962)
||.|.+
T Consensus 161 PVires 166 (681)
T COG2216 161 PVIRES 166 (681)
T ss_pred ceeecc
Confidence 999975
No 61
>PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A ....
Probab=98.73 E-value=7.2e-09 Score=105.53 Aligned_cols=95 Identities=18% Similarity=0.133 Sum_probs=55.6
Q ss_pred CccchhHH-H----hhCcccccccccCCCCcCccchh-------H-----HHHHHHHhhhHHhhhcCCCcEEEeccchhh
Q psy886 850 PEALIKKI-S----TTNRGKKKKLSYNFLDISLLGPA-------I-----HYQVDLTGGPDQVYLSGLPDSIYYLPTTVF 912 (962)
Q Consensus 850 ~~pl~~~q-L----~~d~~~a~al~~e~~~~~~m~~p-------~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (962)
|.||+|+| | ++|.+||++|++||||+++|+|| + +.+.+..|...++.. ...|. .
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~----~~~f~-----~ 71 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAAC----FFAFF-----L 71 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHH----HHHHH-----H
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHH----HHHHH-----H
Confidence 78999999 4 99999999999999999999987 2 333322233221110 00010 0
Q ss_pred hhccccccCCCCccCCCccccccCccchhhHHHHHHHHHHHHHhhccCC
Q psy886 913 ATHHMSCLGGGDEFKGLDCHIFHDPHPMTMALSVLVTIEMLNAMNRYGR 961 (962)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~ 961 (962)
..+.+ +.+... ......+++|++|++++++|++|++++|+.
T Consensus 72 ~~~~~---~~~~~~-----~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~ 112 (182)
T PF00689_consen 72 GLYIF---GWDEET-----NNDNLAQAQTMAFTALVLSQLFNAFNCRSR 112 (182)
T ss_dssp HHHST---CSSSHH-----HTTCHHHHHHHHHHHHHHHHHHHHHHTSSS
T ss_pred Hhhcc---cccccc-----chhHHHHHHHHHHHHHHHHHHhhhcccccc
Confidence 00000 000000 000133589999999999999999999984
No 62
>KOG0209|consensus
Probab=98.66 E-value=3.4e-08 Score=113.58 Aligned_cols=78 Identities=24% Similarity=0.457 Sum_probs=66.2
Q ss_pred HHHHHHHHHhcCC--ccceeeeCCccceeeecccccCCCCEEEeCC---CCeecceEEEEeecCCeEEEEecCCCCCCcc
Q psy886 235 AESAIEALKEYEP--EMGKVIRGDKSGVQKVRAKEIVPGDIVEVSV---GDKIPADIRLIKIYSTTIRIDQSILTGESVS 309 (962)
Q Consensus 235 a~~~l~~L~~~~~--~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~---Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~p 309 (962)
.-+.+..+++|.. ....|+|+++ |+.+.++||.|||+|.+.. ...||||.+|+ .|+|.||||+|||||.|
T Consensus 238 rm~~lse~R~Mg~kpy~I~v~R~kK--W~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL---~GsciVnEaMLtGESvP 312 (1160)
T KOG0209|consen 238 RMRTLSEFRTMGNKPYTINVYRNKK--WVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLL---RGSCIVNEAMLTGESVP 312 (1160)
T ss_pred HHHHHHHHHhcCCCceEEEEEecCc--ceeccccccCCCceEEeccCcccCcCCceEEEE---ecceeechhhhcCCCcc
Confidence 4456666777654 4678999987 9999999999999999987 56899999999 46889999999999999
Q ss_pred eeccCCCC
Q psy886 310 VIKHTDAV 317 (962)
Q Consensus 310 v~K~~~~~ 317 (962)
..|.+...
T Consensus 313 l~KE~Ie~ 320 (1160)
T KOG0209|consen 313 LMKESIEL 320 (1160)
T ss_pred cccccccc
Confidence 99987544
No 63
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=98.61 E-value=3.3e-07 Score=115.66 Aligned_cols=118 Identities=49% Similarity=0.684 Sum_probs=92.1
Q ss_pred hHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEEEeCCCCeecceEEEEeecCCeEEEEecCCCCCCc
Q psy886 229 VQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESV 308 (962)
Q Consensus 229 ~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~ 308 (962)
.+.|+|+++++++|+++.|++++|+|||+ +++|++++|||||+|.+++||+|||||+++++ .++.||||+|||||.
T Consensus 54 ~~qe~~a~~~~~~L~~~~~~~~~ViRdg~--~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~--~~l~VdeS~LTGES~ 129 (917)
T TIGR01116 54 VWQERNAEKAIEALKEYESEHAKVLRDGR--WSVIKAKDLVPGDIVELAVGDKVPADIRVLSL--KTLRVDQSILTGESV 129 (917)
T ss_pred HHHHHHHHHHHHHHhccCCCceEEEECCE--EEEEEHHHCCCCCEEEECCCCEeeccEEEEEe--cceEEEcccccCCCC
Confidence 67899999999999999999999999997 79999999999999999999999999999973 479999999999999
Q ss_pred ceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEeccchhhH
Q psy886 309 SVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLNTAIG 356 (962)
Q Consensus 309 pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~T~~g 356 (962)
|+.|.++ ....+.....-+...+..|+...--...|.-+..|
T Consensus 130 pv~K~~~------~~~~~~~~~~~~~n~l~~GT~v~~G~~~~~V~~tG 171 (917)
T TIGR01116 130 SVNKHTE------SVPDERAVNQDKKNMLFSGTLVVAGKARGVVVRTG 171 (917)
T ss_pred ccccccc------ccCccccCcccccceeeeCCEEecceEEEEEEEeC
Confidence 9999753 11111122223345667777443333344444334
No 64
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=98.56 E-value=4.2e-07 Score=112.22 Aligned_cols=188 Identities=22% Similarity=0.304 Sum_probs=112.1
Q ss_pred hHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEEEeCCCCeecceEEEEeecCCeEEEEecCCCCCCc
Q psy886 229 VQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESV 308 (962)
Q Consensus 229 ~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~ 308 (962)
...|+|+++++++|+++.|++++|+|||+ +++|+++||||||+|.+++||+|||||+++ + |+..
T Consensus 73 ~~qe~~a~~~~~~L~~~~~~~~~V~Rdg~--~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi---------~-----g~~~ 136 (755)
T TIGR01647 73 FIEENKAGNAVEALKQSLAPKARVLRDGK--WQEIPASELVPGDVVRLKIGDIVPADCRLF---------E-----GDYI 136 (755)
T ss_pred HHHHHHHHHHHHHHHhhCCCeEEEEECCE--EEEEEhhhCcCCCEEEECCCCEEeceEEEE---------e-----cCce
Confidence 67899999999999999999999999997 799999999999999999999999999996 2 3322
Q ss_pred ceeccCCCCCCCccCCCCCcc-eEecCceeeeceEEEEEEEeccchhhHHH---HhhccccccCCCchHHHHHHHHHHHH
Q psy886 309 SVIKHTDAVPDPRAVNQDKKN-ILFSGTNVAAGKARGIVMGTGLNTAIGKI---RTEMSETEEIKTPLQQKLDEFGEQLS 384 (962)
Q Consensus 309 pv~K~~~~~~~~~~~~~~~~n-~v~aGT~v~~G~~~~vV~~tG~~T~~gki---~~~~~~~~~~~tplq~~l~~~~~~l~ 384 (962)
-+.-+. .-++... .-..|..+..|+...-=..++.-+..|.- .+..+..+..+. -...+.+....+.
T Consensus 137 ~VDeS~--------LTGES~PV~K~~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~-~~~~lq~~~~~i~ 207 (755)
T TIGR01647 137 QVDQAA--------LTGESLPVTKKTGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTET-GSGHLQKILSKIG 207 (755)
T ss_pred EEEccc--------ccCCccceEeccCCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCC-CCCcHHHHHHHHH
Confidence 221111 0111111 12467778888754333333333333321 111111112111 1224566666665
Q ss_pred HHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHh
Q psy886 385 KVISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMA 450 (962)
Q Consensus 385 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~Lp~~v~i~l~~~~~~m~ 450 (962)
...+.+.+++.++.+.. |.......+..++...++..-.+.|.+++++...+...-.
T Consensus 208 ~~~~~~~~~~~~i~~~~---------~~~~~~~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~ 264 (755)
T TIGR01647 208 LFLIVLIGVLVLIELVV---------LFFGRGESFREGLQFALVLLVGGIPIAMPAVLSVTMAVGA 264 (755)
T ss_pred HHHHHHHHHHHHHHHHH---------HHHHcCCCHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHH
Confidence 55444444333332110 0000001244566666677777788888888877765443
No 65
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=98.53 E-value=7e-07 Score=111.77 Aligned_cols=117 Identities=27% Similarity=0.380 Sum_probs=90.7
Q ss_pred hHHHHhHHHHHHHHHhcCCccceeeeCCc----cceeeecccccCCCCEEEeCCCCeecceEEEEeecCCeEEEEecCCC
Q psy886 229 VQLERNAESAIEALKEYEPEMGKVIRGDK----SGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILT 304 (962)
Q Consensus 229 ~~~e~ra~~~l~~L~~~~~~~a~ViR~g~----~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~VdeS~LT 304 (962)
.+.|+||++++++|+++.|++++|+|+|+ +++++|++++|||||+|.+++||+|||||+|++ +.++.||||+||
T Consensus 140 ~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaDg~li~--g~~l~VDES~LT 217 (902)
T PRK10517 140 FIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQ--ARDLFVAQASLT 217 (902)
T ss_pred HHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeeeEEEEE--cCceEEEecCcC
Confidence 57899999999999999999999999953 347999999999999999999999999999997 456899999999
Q ss_pred CCCcceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEeccch
Q psy886 305 GESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLNT 353 (962)
Q Consensus 305 GEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~T 353 (962)
|||.|+.|. +. ....+..+..-++..+..|+...-=...+.-+
T Consensus 218 GES~PV~K~----~~--~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~ 260 (902)
T PRK10517 218 GESLPVEKF----AT--TRQPEHSNPLECDTLCFMGTNVVSGTAQAVVI 260 (902)
T ss_pred CCCCceecc----cc--cccccccCccccccceeeCceEeeeeEEEEEE
Confidence 999999994 11 11112233444555677777443333334333
No 66
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=98.47 E-value=1.3e-06 Score=109.49 Aligned_cols=118 Identities=32% Similarity=0.403 Sum_probs=94.9
Q ss_pred hHHHHhHHHHHHHHHhcCCccceeee------CCccceeeecccccCCCCEEEeCCCCeecceEEEEeecCCeEEEEecC
Q psy886 229 VQLERNAESAIEALKEYEPEMGKVIR------GDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSI 302 (962)
Q Consensus 229 ~~~e~ra~~~l~~L~~~~~~~a~ViR------~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~VdeS~ 302 (962)
.+.|+|+++++++|+++.+++++|+| ||+ +++|+++||||||+|.+++||+|||||++++ +.++.||||+
T Consensus 106 ~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~--~~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~--g~~l~VDES~ 181 (867)
T TIGR01524 106 FIQESRAERAAYALKNMVKNTATVLRVINENGNGS--MDEVPIDALVPGDLIELAAGDIIPADARVIS--ARDLFINQSA 181 (867)
T ss_pred HHHHHHHHHHHHHHhhhccCeeEEEEecccCCCCe--EEEEEhhcCCCCCEEEECCCCEEcccEEEEe--cCceEEEccc
Confidence 57899999999999999999999999 776 7999999999999999999999999999997 4468999999
Q ss_pred CCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEeccchhhH
Q psy886 303 LTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLNTAIG 356 (962)
Q Consensus 303 LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~T~~g 356 (962)
|||||.|+.|.++ ....+..+..-++..+..|+...-=...+.-+..|
T Consensus 182 LTGES~PV~K~~~------~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG 229 (867)
T TIGR01524 182 LTGESLPVEKFVE------DKRARDPEILERENLCFMGTNVLSGHAQAVVLATG 229 (867)
T ss_pred ccCCCCcccccCC------ccccccccccccccceecCCeEEEeEEEEEEEEEc
Confidence 9999999999864 11123345566677788887544333344444333
No 67
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=98.41 E-value=2.8e-07 Score=115.48 Aligned_cols=123 Identities=33% Similarity=0.414 Sum_probs=95.3
Q ss_pred hHHHHhHHHHHHHHHhcCCccceeeeCCc----cceeeecccccCCCCEEEeCCCCeecceEEEEeecCCeEEEEecCCC
Q psy886 229 VQLERNAESAIEALKEYEPEMGKVIRGDK----SGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILT 304 (962)
Q Consensus 229 ~~~e~ra~~~l~~L~~~~~~~a~ViR~g~----~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~VdeS~LT 304 (962)
...|+|+++++++|+++.+++++|+|+|+ +++++|++++|||||+|.+++||+|||||++++ +.++.||||+||
T Consensus 129 ~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg~li~--g~~l~VDES~LT 206 (903)
T PRK15122 129 FWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIE--SRDLFISQAVLT 206 (903)
T ss_pred HHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCEEeeeEEEEE--cCceEEEccccC
Confidence 67899999999999999999999999962 247999999999999999999999999999997 456899999999
Q ss_pred CCCcceeccCC--CCCC--CccCCCCCcceEecCceeeeceEEEEEEEeccch
Q psy886 305 GESVSVIKHTD--AVPD--PRAVNQDKKNILFSGTNVAAGKARGIVMGTGLNT 353 (962)
Q Consensus 305 GEs~pv~K~~~--~~~~--~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~T 353 (962)
|||.|+.|.+. .... ......+..+..-++..+..|+...-=...+.-+
T Consensus 207 GES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~ 259 (903)
T PRK15122 207 GEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVV 259 (903)
T ss_pred CCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEE
Confidence 99999999862 1110 1111223445666778888887443323333333
No 68
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=98.21 E-value=8.7e-06 Score=104.36 Aligned_cols=225 Identities=17% Similarity=0.193 Sum_probs=133.6
Q ss_pred HHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEEEeC--CCCeecceEEEEeecCCeEEEEecCCCCCC
Q psy886 230 QLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVS--VGDKIPADIRLIKIYSTTIRIDQSILTGES 307 (962)
Q Consensus 230 ~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~--~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs 307 (962)
+.++|+.+.+.++.. .++.++|+|||+ +++|+++||||||+|.++ +||+||||++|++ +++.||||+|||||
T Consensus 212 ~~~~k~~~~L~~~~~-~~~~v~V~Rdg~--~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~---g~~~VdES~LTGES 285 (1054)
T TIGR01657 212 YQIRKQMQRLRDMVH-KPQSVIVIRNGK--WVTIASDELVPGDIVSIPRPEEKTMPCDSVLLS---GSCIVNESMLTGES 285 (1054)
T ss_pred HHHHHHHHHHHHhhc-CCeeEEEEECCE--EEEEEcccCCCCCEEEEecCCCCEecceEEEEe---CcEEEecccccCCc
Confidence 456666666666544 367899999997 899999999999999999 9999999999996 47999999999999
Q ss_pred cceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEe-ccchhhHHHH---------hhccccccCCCchHHHHH
Q psy886 308 VSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGT-GLNTAIGKIR---------TEMSETEEIKTPLQQKLD 377 (962)
Q Consensus 308 ~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~t-G~~T~~gki~---------~~~~~~~~~~tplq~~l~ 377 (962)
.|+.|.+.+.......... ..-..++..+-.|+....+... |..+..|... +..+.. ....+....++
T Consensus 286 ~Pv~K~~~~~~~~~~~~~~-~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i-~~~~~~~~~~~ 363 (1054)
T TIGR01657 286 VPVLKFPIPDNGDDDEDLF-LYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSI-LYPKPRVFKFY 363 (1054)
T ss_pred cceecccCCcccccccccc-ccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHh-hCCCCCCCchH
Confidence 9999987532111000000 0012345567777755433221 1111111111 111111 12233344555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHH--HHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhhhcCc
Q psy886 378 EFGEQLSKVISIICVAVWAINIGHFNDPAHGGSWIKGAV--YYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAI 455 (962)
Q Consensus 378 ~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~v~~iP~~Lp~~v~i~l~~~~~~m~k~~il 455 (962)
+-...+..++++++++.+++.+ ..... ..+...+...+..+=...|..+++++..+....
T Consensus 364 ~~~~~~~~~l~~~a~i~~i~~~------------~~~~~~~~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~------ 425 (1054)
T TIGR01657 364 KDSFKFILFLAVLALIGFIYTI------------IELIKDGRPLGKIILRSLDIITIVVPPALPAELSIGINNS------ 425 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH------------HHHHHcCCcHHHHHHHHHHHHHhhcCchHHHHHHHHHHHH------
Confidence 5555555555544444433311 11110 112233444455556667888888888886543
Q ss_pred cCCchhhhhcCCeeEEEecCCCcccCCceEE
Q psy886 456 VRSLPSVETLGCTSVICSDKTGTLTTNQMSV 486 (962)
Q Consensus 456 vr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v 486 (962)
.-.|.+-.++|.+-.---|-|+.++
T Consensus 426 ------~~rL~k~~il~~~~~~ie~lG~v~v 450 (1054)
T TIGR01657 426 ------LARLKKKGIFCTSPFRINFAGKIDV 450 (1054)
T ss_pred ------HHHHHHCCEEEcCcccceecceeeE
Confidence 3334455678877777667777655
No 69
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=98.16 E-value=2e-06 Score=109.13 Aligned_cols=58 Identities=33% Similarity=0.445 Sum_probs=53.9
Q ss_pred hHHHHhHHHHHHHHHhc-CCccceeeeCCccceeeecccccCCCCEEEeCCCCeecceEEE
Q psy886 229 VQLERNAESAIEALKEY-EPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRL 288 (962)
Q Consensus 229 ~~~e~ra~~~l~~L~~~-~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~l 288 (962)
...|+++++++++|++. .+++++|+|||+ +++|++++|||||+|.+++||+|||||++
T Consensus 146 ~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~--~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~l 204 (941)
T TIGR01517 146 AVNDYKKELQFRQLNREKSAQKIAVIRGGQ--EQQISIHDIVVGDIVSLSTGDVVPADGVF 204 (941)
T ss_pred HHHHHHHHHHHHHHHhccCCCceEEEECCE--EEEEeHHHCCCCCEEEECCCCEecccEEE
Confidence 56899999999999875 578999999997 79999999999999999999999999988
No 70
>KOG0204|consensus
Probab=97.38 E-value=0.00013 Score=85.50 Aligned_cols=55 Identities=31% Similarity=0.471 Sum_probs=47.8
Q ss_pred HHHHhHHHHHHHHHhcCC-ccceeeeCCccceeeecccccCCCCEEEeCCCCeecceE
Q psy886 230 QLERNAESAIEALKEYEP-EMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADI 286 (962)
Q Consensus 230 ~~e~ra~~~l~~L~~~~~-~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~ 286 (962)
..+||.++....|.+... .+..|+|+|+ .++|+..|||||||+.++.||.+||||
T Consensus 201 ~nDy~qe~QF~~L~~~k~~~k~~ViR~G~--r~~isI~diVVGDIv~lk~GDqvPADG 256 (1034)
T KOG0204|consen 201 VNDYRQELQFRKLQKEKRNIKFQVIRGGR--RQQISIYDLVVGDIVQLKIGDQVPADG 256 (1034)
T ss_pred cchhHHhhhhhhhhhhhhceEEEEEECCE--EEEEEEeeeeeccEEEeecCCccccce
Confidence 468888888888865544 4678999998 699999999999999999999999997
No 71
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=97.02 E-value=0.0017 Score=68.04 Aligned_cols=86 Identities=17% Similarity=0.332 Sum_probs=69.0
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCC--------Cccc----c-----C--CC----------
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTE--------EEDT----T-----G--KS---------- 776 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~--------~~~~----~-----g--~~---------- 776 (962)
+++|++++.++.|++.|+++.++||.....+..+.+.+|+..- ++.. . + +.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~ 164 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLTGLVEGPIVDASYKGKTLLILLRKE 164 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEEEEEecCcccCCcccHHHHHHHHHHc
Confidence 5899999999999999999999999999999999999997420 0000 0 0 00
Q ss_pred -------------------CCcCcEEEeccChhHHHHhhcccccccCChhHHHHH
Q psy886 777 -------------------YSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAA 812 (962)
Q Consensus 777 -------------------l~~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~a 812 (962)
.++|+++++++ |.+..+++||.+|.++||..+...
T Consensus 165 ~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~-~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 165 GISPENTVAVGDGANDLSMIKAAGLGIAFN-AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred CCCHHHEEEEECCHHHHHHHHhCCCeEEeC-CCHHHHHhchhccCCCCHHHHHhh
Confidence 13889999885 678899999999999999988653
No 72
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=96.77 E-value=0.0039 Score=57.07 Aligned_cols=88 Identities=15% Similarity=0.194 Sum_probs=68.4
Q ss_pred eEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCC-------------------------
Q psy886 715 LTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEE------------------------- 769 (962)
Q Consensus 715 l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~~------------------------- 769 (962)
+...+.++---++=++|+++|++|++. ++|++-|||..-+-...|+-.||....
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~rv~a~a~~e~K~~ii~eLkk~~~k~v 97 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVERVFAGADPEMKAKIIRELKKRYEKVV 97 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCceeeeecccCHHHHHHHHHHhcCCCcEEE
Confidence 345566666677889999999999999 999999999999999999999985321
Q ss_pred ----ccccCCCCCcCcEEEec-c--ChhHHHHhhccccccc
Q psy886 770 ----EDTTGKSYSKAEIGIAM-G--SGTAVAKSASEMVLAD 803 (962)
Q Consensus 770 ----~~~~g~~l~~AdVGIAm-g--~gtdvAkeaADivL~d 803 (962)
+.++-.+|+.||+||.. + .-.+=+.++||+|+-+
T Consensus 98 mVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~ 138 (152)
T COG4087 98 MVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE 138 (152)
T ss_pred EecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh
Confidence 11222345799999865 3 3567777999999853
No 73
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=96.00 E-value=0.014 Score=64.68 Aligned_cols=87 Identities=11% Similarity=0.236 Sum_probs=69.3
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCC--------Cccc---------cCC-------------
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTE--------EEDT---------TGK------------- 775 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~--------~~~~---------~g~------------- 775 (962)
++.|++.+.++.|+++|+++.++||.....+..+.+++|+..- ++.. .++
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~la~~l 260 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTGNVLGDIVDAQYKADTLTRLAQEY 260 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEeEecCccCCcccHHHHHHHHHHHc
Confidence 5899999999999999999999999998888899999998420 1111 110
Q ss_pred ------------------CCCcCcEEEeccChhHHHHhhcccccccCChhHHHHHH
Q psy886 776 ------------------SYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAV 813 (962)
Q Consensus 776 ------------------~l~~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~ai 813 (962)
.++.|++|||| ++.+..|+.||.++-..++..+...+
T Consensus 261 gi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~ 315 (322)
T PRK11133 261 EIPLAQTVAIGDGANDLPMIKAAGLGIAY-HAKPKVNEQAQVTIRHADLMGVLCIL 315 (322)
T ss_pred CCChhhEEEEECCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHh
Confidence 01489999999 77888899999999888888777543
No 74
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=95.81 E-value=0.015 Score=57.23 Aligned_cols=82 Identities=16% Similarity=0.233 Sum_probs=63.0
Q ss_pred HHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCC---CCc--------------------------cccCCCCCcCcEEE
Q psy886 734 SIARCRAAGIRVIVITGDNKATAEAICRRIGVFT---EEE--------------------------DTTGKSYSKAEIGI 784 (962)
Q Consensus 734 aI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~---~~~--------------------------~~~g~~l~~AdVGI 784 (962)
+|+.|++.|+++.++||+....+..+.+++|+.. ... ..+...++.|.+++
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~ 115 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHLYQGQSNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKVGLSV 115 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEEEecccchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeE
Confidence 9999999999999999999999999999999852 100 00011125899999
Q ss_pred eccChhHHHHhhcccccccCC----hhHHHHHHHH
Q psy886 785 AMGSGTAVAKSASEMVLADDN----FSSIVAAVEE 815 (962)
Q Consensus 785 Amg~gtdvAkeaADivL~dd~----f~~iv~ai~~ 815 (962)
+|..+.+..+..||.++..+. |..+++.+.+
T Consensus 116 ~v~~~~~~~~~~a~~i~~~~~~~g~~~~~~~~~~~ 150 (154)
T TIGR01670 116 AVADAHPLLIPRADYVTRIAGGRGAVREVCELLLL 150 (154)
T ss_pred ecCCcCHHHHHhCCEEecCCCCCcHHHHHHHHHHH
Confidence 999888899999999997542 6666665544
No 75
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=95.34 E-value=0.025 Score=56.41 Aligned_cols=83 Identities=16% Similarity=0.242 Sum_probs=62.5
Q ss_pred HHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCccc-----------------------cCC------CCCcCcEE
Q psy886 733 DSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDT-----------------------TGK------SYSKAEIG 783 (962)
Q Consensus 733 eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~~~~~-----------------------~g~------~l~~AdVG 783 (962)
.+|+.|+++|+++.++|+.....+..+.+++|+..--... -|. .++.|+++
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~f~~~kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~ 120 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRFHEGIKKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLA 120 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEEEecCCCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCe
Confidence 6999999999999999999999999999999995210000 011 12589999
Q ss_pred EeccChhHHHHhhcccccccCC----hhHHHHHHHH
Q psy886 784 IAMGSGTAVAKSASEMVLADDN----FSSIVAAVEE 815 (962)
Q Consensus 784 IAmg~gtdvAkeaADivL~dd~----f~~iv~ai~~ 815 (962)
+||+++.+..|++||.|..+++ +..+.+.+-.
T Consensus 121 ~am~nA~~~lk~~A~~I~~~~~~~g~v~e~~e~il~ 156 (169)
T TIGR02726 121 VAVGDAVADVKEAAAYVTTARGGHGAVREVAELILK 156 (169)
T ss_pred EECcCchHHHHHhCCEEcCCCCCCCHHHHHHHHHHH
Confidence 9999999999999999876433 3444444443
No 76
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=94.27 E-value=0.14 Score=54.02 Aligned_cols=40 Identities=28% Similarity=0.356 Sum_probs=37.5
Q ss_pred CCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 727 PRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 727 lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
+.+.+.++|+++++.|+++++.||-....+..+++++|+.
T Consensus 21 i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 60 (230)
T PRK01158 21 LSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTS 60 (230)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCC
Confidence 6789999999999999999999999999999999999873
No 77
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=94.26 E-value=0.14 Score=55.35 Aligned_cols=40 Identities=25% Similarity=0.399 Sum_probs=38.5
Q ss_pred CCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 727 PRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 727 lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
+.+.+.++|+++++.|+++++.||-....+..+.+++|+.
T Consensus 21 i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~ 60 (264)
T COG0561 21 ISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLD 60 (264)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCC
Confidence 7899999999999999999999999999999999999983
No 78
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=94.16 E-value=0.064 Score=54.44 Aligned_cols=85 Identities=15% Similarity=0.208 Sum_probs=63.0
Q ss_pred HHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCC---Ccc--------------------ccC------CCCCcCcEE
Q psy886 733 DSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTE---EED--------------------TTG------KSYSKAEIG 783 (962)
Q Consensus 733 eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~---~~~--------------------~~g------~~l~~AdVG 783 (962)
.+|+.|++.|+++.++||.....+..+++++|+..- ... .-| ..++.|.++
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~f~g~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~ 134 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHLYQGQSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLS 134 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCceeecCCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCe
Confidence 699999999999999999999999999999998521 000 001 112589999
Q ss_pred EeccChhHHHHhhccccccc----CChhHHHHHHHHhH
Q psy886 784 IAMGSGTAVAKSASEMVLAD----DNFSSIVAAVEEGR 817 (962)
Q Consensus 784 IAmg~gtdvAkeaADivL~d----d~f~~iv~ai~~gR 817 (962)
++++.+.+..+..||.|+-. ..+..+.+.+...|
T Consensus 135 ~~v~~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~~~ 172 (183)
T PRK09484 135 VAVADAHPLLLPRADYVTRIAGGRGAVREVCDLLLLAQ 172 (183)
T ss_pred EecCChhHHHHHhCCEEecCCCCCCHHHHHHHHHHHhc
Confidence 99988889999999999853 22455565555443
No 79
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=93.38 E-value=0.16 Score=53.00 Aligned_cols=41 Identities=24% Similarity=0.359 Sum_probs=38.4
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
++.++..++|++|++.|+++++.||-....+..+++++++.
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~ 58 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTS 58 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCC
Confidence 47889999999999999999999999999999999999874
No 80
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=93.37 E-value=0.23 Score=53.87 Aligned_cols=40 Identities=18% Similarity=0.268 Sum_probs=38.0
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGV 765 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI 765 (962)
.+.+...++|+++++.|+++++.||=....+..+.+++|+
T Consensus 19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~ 58 (272)
T PRK15126 19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSL 58 (272)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCC
Confidence 5888999999999999999999999999999999999987
No 81
>KOG0210|consensus
Probab=93.25 E-value=0.065 Score=62.16 Aligned_cols=62 Identities=23% Similarity=0.368 Sum_probs=52.3
Q ss_pred eeeCCccceeeecccccCCCCEEEeCCCCeecceEEEEeec--CCeEEEEecCCCCCCcceeccCCC
Q psy886 252 VIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIY--STTIRIDQSILTGESVSVIKHTDA 316 (962)
Q Consensus 252 ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~--~~~l~VdeS~LTGEs~pv~K~~~~ 316 (962)
.-|+|. ...++++|++||+|+++.+++||||+++++.+ ++.|.+-+..|+||+..+.|-+.+
T Consensus 168 ltr~~~---~~~~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGETDWKLrl~vp 231 (1051)
T KOG0210|consen 168 LTRDGT---RREPSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGETDWKLRLPVP 231 (1051)
T ss_pred eccCCc---ccccccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCcccceeeccch
Confidence 346664 44599999999999999999999999999753 568999999999999988887653
No 82
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=93.04 E-value=0.28 Score=51.38 Aligned_cols=40 Identities=25% Similarity=0.520 Sum_probs=37.2
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGV 765 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI 765 (962)
.+.+.+.++|+++++.||++++.||-....+..+++++|+
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~ 54 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGT 54 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCC
Confidence 4678899999999999999999999999999999999985
No 83
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=92.92 E-value=0.36 Score=49.80 Aligned_cols=89 Identities=13% Similarity=0.257 Sum_probs=65.6
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCC--------CC-ccccCCC--------------------
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFT--------EE-EDTTGKS-------------------- 776 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~--------~~-~~~~g~~-------------------- 776 (962)
+++|++++.|+.+|+.| ++.++||-....+..+++++|+.. .+ +..+|..
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~l~~~~~~ 146 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYYR 146 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCeeECeeecCcchHHHHHHHHHhhCCC
Confidence 57999999999999975 999999999999999999999842 01 2223211
Q ss_pred -------------CCcCcEEEeccChhHHHHhhcccccccCChhHHHHHHHHh
Q psy886 777 -------------YSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEG 816 (962)
Q Consensus 777 -------------l~~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~ai~~g 816 (962)
++.||+|||+.....+.++|=|+-... +.+.+..++.++
T Consensus 147 ~v~vGDs~nDl~ml~~Ag~~ia~~ak~~~~~~~~~~~~~~-~~~~~~~~~~~~ 198 (203)
T TIGR02137 147 VIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAVH-TYEDLKREFLKA 198 (203)
T ss_pred EEEEeCCHHHHHHHHhCCCCEEecCCHHHHHhCCCCCccc-CHHHHHHHHHHH
Confidence 148999999976666666665655443 466777766654
No 84
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=92.38 E-value=0.44 Score=49.95 Aligned_cols=42 Identities=19% Similarity=0.271 Sum_probs=39.2
Q ss_pred CCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 725 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 725 D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
-++.||+.+.++.|++.|+++.++||.....+..+.+..|+.
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 133 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIA 133 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCc
Confidence 357999999999999999999999999999999999999984
No 85
>KOG0206|consensus
Probab=91.37 E-value=0.15 Score=64.49 Aligned_cols=71 Identities=27% Similarity=0.372 Sum_probs=62.0
Q ss_pred hcCCccceeeeCCccceeeecccccCCCCEEEeCCCCeecceEEEEeec--CCeEEEEecCCCCCCcceeccCC
Q psy886 244 EYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIY--STTIRIDQSILTGESVSVIKHTD 315 (962)
Q Consensus 244 ~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~--~~~l~VdeS~LTGEs~pv~K~~~ 315 (962)
+.+...++|.|++.. +++..|++|++||+|.+..++.+|||.+|++++ .+.|+|++++|+||+....|...
T Consensus 111 ~iN~~~~~v~~~~~~-~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~k~~l 183 (1151)
T KOG0206|consen 111 EVNNRKVEVLRGDGC-FVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKVKQAL 183 (1151)
T ss_pred HhhcceeEEecCCce-eeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccceeeeh
Confidence 345567899998776 899999999999999999999999999999643 46799999999999999988763
No 86
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=90.99 E-value=0.51 Score=49.99 Aligned_cols=41 Identities=15% Similarity=0.405 Sum_probs=38.4
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
.+-+++.+++++++++|+++++.||-....+..+.+++++.
T Consensus 15 ~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~ 55 (254)
T PF08282_consen 15 KISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGID 55 (254)
T ss_dssp SSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHC
T ss_pred eeCHHHHHHHHhhcccceEEEEEccCcccccccccccccch
Confidence 46789999999999999999999999999999999999974
No 87
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=89.73 E-value=0.64 Score=43.68 Aligned_cols=45 Identities=11% Similarity=0.120 Sum_probs=41.5
Q ss_pred cccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 722 GMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 722 ~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
.-..++++++++.+++|++.|++++++||-....+....+++|+.
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~ 64 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLD 64 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCc
Confidence 455689999999999999999999999999999999999999973
No 88
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=89.63 E-value=0.39 Score=48.77 Aligned_cols=39 Identities=23% Similarity=0.540 Sum_probs=36.9
Q ss_pred ccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCC
Q psy886 729 KEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFT 767 (962)
Q Consensus 729 ~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~ 767 (962)
+++++.|+.++++|++++++||+....+..+|+.+|+..
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~ 130 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDD 130 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSE
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCc
Confidence 788899999999999999999999999999999999964
No 89
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=89.03 E-value=0.66 Score=48.20 Aligned_cols=42 Identities=26% Similarity=0.352 Sum_probs=40.6
Q ss_pred CCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 725 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 725 D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
.+++|++.+.++.+|++|.+|+++||=-..-+..||+.+|+.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d 117 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGID 117 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCc
Confidence 689999999999999999999999999999999999999995
No 90
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=88.71 E-value=0.39 Score=52.01 Aligned_cols=62 Identities=18% Similarity=0.329 Sum_probs=46.9
Q ss_pred HHHHHHHHHHcCCCCC------CccccCCCCCcCcEEEeccChhHHHHhhcccccccCChhHHHHHHH
Q psy886 753 KATAEAICRRIGVFTE------EEDTTGKSYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVE 814 (962)
Q Consensus 753 ~~TA~~IA~~~GI~~~------~~~~~g~~l~~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~ai~ 814 (962)
..-...+++.+||-.. |..++-+-|+.|++|+|||++++..|++||.|..+++=..+..+|+
T Consensus 198 g~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 198 GTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred HHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCcchHHHHHH
Confidence 3444567888898543 3344445568999999999999999999999987776667777665
No 91
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=88.44 E-value=1.6 Score=45.58 Aligned_cols=89 Identities=17% Similarity=0.319 Sum_probs=67.4
Q ss_pred cCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCcc-------------------------cc-----
Q psy886 724 LDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEED-------------------------TT----- 773 (962)
Q Consensus 724 ~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~~~~-------------------------~~----- 773 (962)
..++-|+++++++.|+++|++..++|++....+..+.+..|+..-=.. ..
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l 166 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEAL 166 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheE
Confidence 456889999999999999999999999999999999999998531000 00
Q ss_pred --CCCC------CcCc---EEEecc-C-hhHHHHhhcccccccCChhHHHHHHH
Q psy886 774 --GKSY------SKAE---IGIAMG-S-GTAVAKSASEMVLADDNFSSIVAAVE 814 (962)
Q Consensus 774 --g~~l------~~Ad---VGIAmg-~-gtdvAkeaADivL~dd~f~~iv~ai~ 814 (962)
|... ++|+ ||+..| . +.......+|.++ +++..|...+.
T Consensus 167 ~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi--~~~~el~~~l~ 218 (220)
T COG0546 167 MVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVI--DSLAELLALLA 218 (220)
T ss_pred EECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEE--CCHHHHHHHHh
Confidence 1100 3554 889998 3 6778888899998 66777776554
No 92
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=88.06 E-value=1.1 Score=43.08 Aligned_cols=34 Identities=26% Similarity=0.452 Sum_probs=32.1
Q ss_pred HHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 733 DSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 733 eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
-.|+.+.++||+|.+|||-+......=|+++||-
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~ 75 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIK 75 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCc
Confidence 5899999999999999999999999999999994
No 93
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=86.96 E-value=0.64 Score=50.30 Aligned_cols=69 Identities=20% Similarity=0.299 Sum_probs=50.0
Q ss_pred EEEcCCCHHHH-HHHHHHcCCCCC------CccccCCCCCcCcEEEeccChhHHHHhhcccccccCChhHHHHHHH
Q psy886 746 IVITGDNKATA-EAICRRIGVFTE------EEDTTGKSYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVE 814 (962)
Q Consensus 746 ~MiTGD~~~TA-~~IA~~~GI~~~------~~~~~g~~l~~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~ai~ 814 (962)
++-.|.+..+| ..+++.+|+-.. |..++-+.++.|++|+|||++.+..|++||.|..+++=..+..+|+
T Consensus 193 i~~~~~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 193 IARKGNSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred EecCCCChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 44456555554 457888887542 3334445567999999999888888999999987777777777765
No 94
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=86.75 E-value=2.4 Score=43.57 Aligned_cols=40 Identities=15% Similarity=0.243 Sum_probs=37.3
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
++.||+++.++.|+++ +++.++|+-....+..+.+++|+.
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~ 107 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWP 107 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCc
Confidence 4689999999999999 999999999999999999999974
No 95
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=86.64 E-value=1.2 Score=44.43 Aligned_cols=41 Identities=17% Similarity=0.345 Sum_probs=38.5
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
+++|++++.++.|++.|++++++||.....+..+++.+|+.
T Consensus 73 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~ 113 (177)
T TIGR01488 73 ALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGID 113 (177)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCc
Confidence 36899999999999999999999999999999999999984
No 96
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=86.34 E-value=1.6 Score=46.91 Aligned_cols=43 Identities=14% Similarity=0.201 Sum_probs=40.2
Q ss_pred CCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCC
Q psy886 725 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFT 767 (962)
Q Consensus 725 D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~ 767 (962)
-++|||+++.++.|++.||++.++||=-...+..+.++.|+..
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~ 162 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYH 162 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCC
Confidence 3679999999999999999999999999999999999999854
No 97
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=86.31 E-value=2.8 Score=43.13 Aligned_cols=41 Identities=22% Similarity=0.344 Sum_probs=38.4
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
++.|++.++++.|++.|+++.++||.....+..+-+..|+.
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~ 115 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLL 115 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCCh
Confidence 67899999999999999999999999999999999999984
No 98
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=84.33 E-value=1.3 Score=45.55 Aligned_cols=43 Identities=16% Similarity=0.212 Sum_probs=39.9
Q ss_pred cCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 724 LDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 724 ~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
..++++++.+.++.+++.|++++++||-....+..+++.+|+.
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~ 127 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGID 127 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCc
Confidence 3468999999999999999999999999999999999999984
No 99
>PLN02954 phosphoserine phosphatase
Probab=84.17 E-value=1.8 Score=45.31 Aligned_cols=41 Identities=15% Similarity=0.283 Sum_probs=38.8
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
+++|++++.++.|++.|+++.++||.....+..+.+.+|+.
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~ 124 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIP 124 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCC
Confidence 37899999999999999999999999999999999999984
No 100
>PRK10976 putative hydrolase; Provisional
Probab=83.92 E-value=0.82 Score=49.35 Aligned_cols=63 Identities=16% Similarity=0.196 Sum_probs=44.9
Q ss_pred CHHHHHHHHHHcCCCCC------CccccCCCCCcCcEEEeccChhHHHHhhcc--cccccCChhHHHHHHH
Q psy886 752 NKATAEAICRRIGVFTE------EEDTTGKSYSKAEIGIAMGSGTAVAKSASE--MVLADDNFSSIVAAVE 814 (962)
Q Consensus 752 ~~~TA~~IA~~~GI~~~------~~~~~g~~l~~AdVGIAmg~gtdvAkeaAD--ivL~dd~f~~iv~ai~ 814 (962)
+..-...+++.+||-.. |..++-+-++.|+.|||||++++..|++|| .|..+++=..+..+++
T Consensus 191 Kg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 191 KGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred hHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 44445667889998543 333444456899999999999999999988 5655555556666654
No 101
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=83.60 E-value=2 Score=43.94 Aligned_cols=41 Identities=10% Similarity=0.218 Sum_probs=38.8
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
+++|++.+.++.|++.|+++.++|+-....+..+++.+|+.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~ 120 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPD 120 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCC
Confidence 58999999999999999999999999999999999999973
No 102
>PLN02887 hydrolase family protein
Probab=82.74 E-value=1 Score=53.99 Aligned_cols=64 Identities=13% Similarity=0.297 Sum_probs=48.0
Q ss_pred CCHHHHHHHHHHcCCCCC------CccccCCCCCcCcEEEeccChhHHHHhhcccccccCChhHHHHHHH
Q psy886 751 DNKATAEAICRRIGVFTE------EEDTTGKSYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVE 814 (962)
Q Consensus 751 D~~~TA~~IA~~~GI~~~------~~~~~g~~l~~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~ai~ 814 (962)
++...-..+++.+||-.+ |..++-.-|+.|+.|||||+|.+..|++||.|..+++=..+..+|+
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 344555677889998543 3334444567999999999999999999999987766667777665
No 103
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=81.17 E-value=2.8 Score=39.69 Aligned_cols=41 Identities=24% Similarity=0.348 Sum_probs=37.2
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCC--------HHHHHHHHHHcCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDN--------KATAEAICRRIGVF 766 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~--------~~TA~~IA~~~GI~ 766 (962)
++.|++.++++.|+++|+++.++|+.. .+....+.+.+|+.
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~ 73 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP 73 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCC
Confidence 578999999999999999999999988 77788888888874
No 104
>KOG1615|consensus
Probab=79.16 E-value=4 Score=40.75 Aligned_cols=41 Identities=20% Similarity=0.376 Sum_probs=39.0
Q ss_pred CCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCC
Q psy886 727 PRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFT 767 (962)
Q Consensus 727 lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~ 767 (962)
+-|+++|-++.||+.|.+|.++||--..-+..||.++||.-
T Consensus 89 lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~ 129 (227)
T KOG1615|consen 89 LTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPK 129 (227)
T ss_pred cCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcH
Confidence 57999999999999999999999999999999999999964
No 105
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=78.97 E-value=1.3 Score=40.11 Aligned_cols=48 Identities=17% Similarity=0.317 Sum_probs=35.1
Q ss_pred EecccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHH---HHcCCCC
Q psy886 720 VVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAIC---RRIGVFT 767 (962)
Q Consensus 720 l~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA---~~~GI~~ 767 (962)
.+...+.+=|+++|+|+.|+++|++++.+|-....+...++ +++|+..
T Consensus 8 vl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~ 58 (101)
T PF13344_consen 8 VLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPV 58 (101)
T ss_dssp TSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT-
T ss_pred EeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCC
Confidence 33446778899999999999999999999998866655555 4567653
No 106
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=77.64 E-value=7.3 Score=41.13 Aligned_cols=86 Identities=8% Similarity=0.130 Sum_probs=57.1
Q ss_pred ccHHHHHHHHHHcCCEE-EEEcC-----------CCHHHHHHHHHHcCCCC------CCccccCCCCCcCcEEEeccChh
Q psy886 729 KEVFDSIARCRAAGIRV-IVITG-----------DNKATAEAICRRIGVFT------EEEDTTGKSYSKAEIGIAMGSGT 790 (962)
Q Consensus 729 ~~v~eaI~~l~~AGI~v-~MiTG-----------D~~~TA~~IA~~~GI~~------~~~~~~g~~l~~AdVGIAmg~gt 790 (962)
+...+..+.+++.+.++ ++.++ ++..-...++++.|+.. +|..++-..++.|+.||+|+++.
T Consensus 125 ~~~~~~~~~l~~~~~~~~~~~~~~~~~ei~~~~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~ 204 (236)
T TIGR02471 125 PILPQIRQRLRQQSQAAKVILSCGWFLDVLPLRASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHD 204 (236)
T ss_pred hHHHHHHHHHHhccCCEEEEEECCceEEEeeCCCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCc
Confidence 34556667777766543 23333 66777788888899743 23334444567899999999999
Q ss_pred HHHHhhcc----cccccCChhHHHHHHH
Q psy886 791 AVAKSASE----MVLADDNFSSIVAAVE 814 (962)
Q Consensus 791 dvAkeaAD----ivL~dd~f~~iv~ai~ 814 (962)
+-.|+.|| .|--.++=..+.++|+
T Consensus 205 ~~~k~~a~~~~~~v~~~~~~~Gv~~~i~ 232 (236)
T TIGR02471 205 PELEGLRHQQRIYFANNPHAFGILEGIN 232 (236)
T ss_pred HHHHHhhcCCcEEEcCCCChhHHHHHHH
Confidence 99999999 4443444455666654
No 107
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=77.03 E-value=4.1 Score=41.00 Aligned_cols=42 Identities=26% Similarity=0.284 Sum_probs=39.2
Q ss_pred CCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 725 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 725 D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
-++++++.+.++.|++.|+++.++|+.+......+.+..|+.
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 112 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEK 112 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCCh
Confidence 378999999999999999999999999999999999999874
No 108
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=76.67 E-value=4.3 Score=41.93 Aligned_cols=41 Identities=20% Similarity=0.262 Sum_probs=38.6
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
++.|++.+.++.|++.|+++.++|+-....+..+.+..|+.
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 125 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLA 125 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcH
Confidence 57999999999999999999999999999999999999984
No 109
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=76.40 E-value=4.3 Score=42.41 Aligned_cols=42 Identities=19% Similarity=0.312 Sum_probs=38.9
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFT 767 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~ 767 (962)
+|.|++.++++.|++.|+++.++|+........+.+..||..
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~ 133 (222)
T PRK10826 92 PLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRD 133 (222)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchh
Confidence 578999999999999999999999999999999999999843
No 110
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=75.86 E-value=5.1 Score=40.92 Aligned_cols=41 Identities=17% Similarity=0.421 Sum_probs=37.8
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
++.|++.+++++|++.|+++.++|+-+...+..+.+.+||.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~ 132 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLD 132 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCCh
Confidence 57899999999999999999999998988888999999974
No 111
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=75.38 E-value=4.8 Score=42.28 Aligned_cols=42 Identities=12% Similarity=0.237 Sum_probs=37.8
Q ss_pred CCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 725 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 725 D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
+..-+++.++|++|++.|+++++.||=.+..+..+.+++|+.
T Consensus 14 ~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 14 GYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 445567999999999999999999999999999999999974
No 112
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=73.74 E-value=5.7 Score=41.26 Aligned_cols=41 Identities=20% Similarity=0.123 Sum_probs=37.5
Q ss_pred CCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCC
Q psy886 725 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGV 765 (962)
Q Consensus 725 D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI 765 (962)
-+++|++++.++.|++.|+++.++||.....+..+.+.++.
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~ 109 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVE 109 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCC
Confidence 36899999999999999999999999999999999888753
No 113
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=73.59 E-value=6.5 Score=39.24 Aligned_cols=42 Identities=19% Similarity=0.392 Sum_probs=36.9
Q ss_pred CCCCccHHHHHHHHHHcCCEEEEEcCCC-HHHHHHHHHHcCCC
Q psy886 725 DPPRKEVFDSIARCRAAGIRVIVITGDN-KATAEAICRRIGVF 766 (962)
Q Consensus 725 D~lR~~v~eaI~~l~~AGI~v~MiTGD~-~~TA~~IA~~~GI~ 766 (962)
..+.++++++++.|++.|+++.++|+-. ...+..+.+.+|+.
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~ 84 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIP 84 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCE
Confidence 3578999999999999999999999987 67788888888874
No 114
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=73.11 E-value=4 Score=40.18 Aligned_cols=87 Identities=21% Similarity=0.326 Sum_probs=58.7
Q ss_pred CCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCC-CccccCCCCCcCcEEEeccCh---hHHH----Hhh
Q psy886 725 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTE-EEDTTGKSYSKAEIGIAMGSG---TAVA----KSA 796 (962)
Q Consensus 725 D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~-~~~~~g~~l~~AdVGIAmg~g---tdvA----kea 796 (962)
.++.|++.+.++.|++.|++++++|+-.........+++|+..- +......+ .|..--.. -.++ -..
T Consensus 76 ~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~-----~~~~Kp~~~~~~~~~~~~~~~p 150 (176)
T PF13419_consen 76 LQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDD-----VGSRKPDPDAYRRALEKLGIPP 150 (176)
T ss_dssp EEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGG-----SSSSTTSHHHHHHHHHHHTSSG
T ss_pred cchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccch-----hhhhhhHHHHHHHHHHHcCCCc
Confidence 35799999999999999999999999999999999999998621 11111111 11000000 0111 134
Q ss_pred cccccccCChhHHHHHHHHh
Q psy886 797 SEMVLADDNFSSIVAAVEEG 816 (962)
Q Consensus 797 ADivL~dd~f~~iv~ai~~g 816 (962)
.+++..+|+...+..|.+.|
T Consensus 151 ~~~~~vgD~~~d~~~A~~~G 170 (176)
T PF13419_consen 151 EEILFVGDSPSDVEAAKEAG 170 (176)
T ss_dssp GGEEEEESSHHHHHHHHHTT
T ss_pred ceEEEEeCCHHHHHHHHHcC
Confidence 67899999998877776654
No 115
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=73.09 E-value=6.9 Score=40.58 Aligned_cols=42 Identities=14% Similarity=0.151 Sum_probs=37.8
Q ss_pred CCCccHHHHHH-HHHHcCCEEEEEcCCCHHHHHHHHHHcCCCC
Q psy886 726 PPRKEVFDSIA-RCRAAGIRVIVITGDNKATAEAICRRIGVFT 767 (962)
Q Consensus 726 ~lR~~v~eaI~-~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~ 767 (962)
.++|++.++|+ .+++.|++++++|+=....+..+|+..|+..
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~ 136 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIH 136 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccc
Confidence 46999999996 7898999999999999999999999977654
No 116
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=72.74 E-value=6.2 Score=40.89 Aligned_cols=42 Identities=14% Similarity=0.254 Sum_probs=38.7
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFT 767 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~ 767 (962)
++.||+.+.++.|+++|+++.++|+-....+..+-+..|+..
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~ 123 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDE 123 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChh
Confidence 378999999999999999999999999999999999999853
No 117
>PRK08238 hypothetical protein; Validated
Probab=72.46 E-value=5.7 Score=46.62 Aligned_cols=41 Identities=32% Similarity=0.586 Sum_probs=39.0
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
|++|++.+.++++|++|++++++|+=+...+..+++++|++
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlF 112 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLF 112 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 57899999999999999999999999999999999999984
No 118
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=72.43 E-value=5.6 Score=42.56 Aligned_cols=41 Identities=22% Similarity=0.387 Sum_probs=38.1
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
++.+++.++|+++++.|+++++.||.....+..+.+++|+.
T Consensus 16 ~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~ 56 (256)
T TIGR00099 16 TISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLD 56 (256)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 47789999999999999999999999999999999999874
No 119
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=72.02 E-value=6.2 Score=42.25 Aligned_cols=40 Identities=23% Similarity=0.280 Sum_probs=36.5
Q ss_pred CCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 727 PRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 727 lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
.-+.+.++|++|+++|+++++.||-.+..+..+.+++|+.
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~ 56 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLE 56 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 3446899999999999999999999999999999999974
No 120
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=71.80 E-value=6.8 Score=42.46 Aligned_cols=42 Identities=12% Similarity=0.167 Sum_probs=38.4
Q ss_pred CCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 725 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 725 D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
.++.|++.++++.|++.|+++.++||-....+..+.++.|+-
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~ 141 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIG 141 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcH
Confidence 468999999999999999999999999999999888888874
No 121
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=71.42 E-value=6.8 Score=42.36 Aligned_cols=40 Identities=15% Similarity=0.186 Sum_probs=36.2
Q ss_pred CC-ccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 727 PR-KEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 727 lR-~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
+| |++.+++++|+++|+++.++|+-..+.+..+-++.|+.
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~ 188 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLE 188 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCC
Confidence 46 89999999999999999999977777888899999985
No 122
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=70.88 E-value=6.7 Score=42.49 Aligned_cols=42 Identities=19% Similarity=0.246 Sum_probs=38.5
Q ss_pred CCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 725 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 725 D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
..+.+++.++|++|++.|+++++.||-....+..+.+++|+.
T Consensus 20 ~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~ 61 (273)
T PRK00192 20 TYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLE 61 (273)
T ss_pred CcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 346678999999999999999999999999999999999985
No 123
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=70.80 E-value=7.2 Score=39.83 Aligned_cols=43 Identities=16% Similarity=0.077 Sum_probs=39.2
Q ss_pred cCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 724 LDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 724 ~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
.+++.++++++++.|++.|+++.++||-....+..+-+.+|+.
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 146 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLE 146 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCch
Confidence 4557788899999999999999999999999999999999985
No 124
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=70.78 E-value=7.2 Score=42.14 Aligned_cols=41 Identities=12% Similarity=0.269 Sum_probs=37.6
Q ss_pred CC-ccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCC
Q psy886 727 PR-KEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFT 767 (962)
Q Consensus 727 lR-~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~ 767 (962)
+| |++.+++++|+++|+++.+.|+=..+.+...=+++||..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 67 999999999999999999999988888888999999863
No 125
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=70.75 E-value=7.3 Score=38.90 Aligned_cols=83 Identities=19% Similarity=0.284 Sum_probs=52.9
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCC-CccccCCCCCcCcEEEeccC-hhH----HH----Hh
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTE-EEDTTGKSYSKAEIGIAMGS-GTA----VA----KS 795 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~-~~~~~g~~l~~AdVGIAmg~-gtd----vA----ke 795 (962)
++.|++.+.++.|+++|++++++|+-.... ..+..++|+... +..+.+. ++| .+. ..+ ++ ..
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~-----~~~--~~KP~~~~~~~~~~~~~~~ 156 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSG-----DVG--RGKPDPDIYLLALKKLGLK 156 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcC-----CCC--CCCCCHHHHHHHHHHcCCC
Confidence 578999999999999999999999988777 556556887431 1111111 111 110 001 11 13
Q ss_pred hcccccccCChhHHHHHHHHh
Q psy886 796 ASEMVLADDNFSSIVAAVEEG 816 (962)
Q Consensus 796 aADivL~dd~f~~iv~ai~~g 816 (962)
..+++..+|+...+..|-..|
T Consensus 157 ~~~~~~vgD~~~di~aA~~~G 177 (183)
T TIGR01509 157 PEECLFVDDSPAGIEAAKAAG 177 (183)
T ss_pred cceEEEEcCCHHHHHHHHHcC
Confidence 467888888887776665544
No 126
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=70.71 E-value=6.4 Score=42.46 Aligned_cols=41 Identities=24% Similarity=0.298 Sum_probs=38.4
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
.+-+...++|++++++|+++++.||-....+..+.+++|+.
T Consensus 20 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 60 (270)
T PRK10513 20 TISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHME 60 (270)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCC
Confidence 57888999999999999999999999999999999999974
No 127
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=70.45 E-value=7.4 Score=40.57 Aligned_cols=40 Identities=10% Similarity=0.144 Sum_probs=37.2
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
+++||+.+.++.|++.|+++.++||-....+..+.+++ +.
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~ 113 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IP 113 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CC
Confidence 58999999999999999999999999999999999987 53
No 128
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=70.08 E-value=7.4 Score=40.44 Aligned_cols=41 Identities=24% Similarity=0.231 Sum_probs=37.2
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
++.|++.++++.|++.|++++++|+=....+...-+.+|+.
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~ 134 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVR 134 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChH
Confidence 47899999999999999999999998888888888888874
No 129
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=69.91 E-value=9.3 Score=38.26 Aligned_cols=50 Identities=20% Similarity=0.109 Sum_probs=42.2
Q ss_pred EEEEecccCCCCccHHHHHHHHHHcCCEEEEEcC-CCHHHHHHHHHHcCCC
Q psy886 717 FVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITG-DNKATAEAICRRIGVF 766 (962)
Q Consensus 717 ~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTG-D~~~TA~~IA~~~GI~ 766 (962)
.....+-+-+++||+.+.++.|+++|+++.++|+ |...++..+-..+|+.
T Consensus 36 ~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~ 86 (174)
T TIGR01685 36 IIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEIT 86 (174)
T ss_pred EEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcC
Confidence 4444555567899999999999999999999996 5899999998889874
No 130
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=69.54 E-value=7.5 Score=41.03 Aligned_cols=84 Identities=18% Similarity=0.190 Sum_probs=54.0
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcC----CCHHHHHHHHHHcCCCCCC---ccccCCCCCcCcEEEeccChhHHHHhhcc
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITG----DNKATAEAICRRIGVFTEE---EDTTGKSYSKAEIGIAMGSGTAVAKSASE 798 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTG----D~~~TA~~IA~~~GI~~~~---~~~~g~~l~~AdVGIAmg~gtdvAkeaAD 798 (962)
.|.+++++.++.+++.|+++.++|| -...|+..+.+..||...+ ....|....+- .-.+..++.--
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~~K~-------~K~~~l~~~~i 186 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKPGQY-------TKTQWLKKKNI 186 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCCCCC-------CHHHHHHhcCC
Confidence 4788899999999999999999999 4577999999999994221 11122110000 11123333333
Q ss_pred cccccCChhHHHHHHHHh
Q psy886 799 MVLADDNFSSIVAAVEEG 816 (962)
Q Consensus 799 ivL~dd~f~~iv~ai~~g 816 (962)
.+...|+...+..|-+-|
T Consensus 187 ~I~IGDs~~Di~aA~~AG 204 (237)
T PRK11009 187 RIFYGDSDNDITAAREAG 204 (237)
T ss_pred eEEEcCCHHHHHHHHHcC
Confidence 566777777777664443
No 131
>PRK11590 hypothetical protein; Provisional
Probab=69.46 E-value=9.2 Score=39.62 Aligned_cols=41 Identities=15% Similarity=0.112 Sum_probs=37.4
Q ss_pred CCCccHHHHH-HHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 726 PPRKEVFDSI-ARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 726 ~lR~~v~eaI-~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
+++|++.+.| +.+++.|++++++|+-...-+..+++.+|+.
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~ 136 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWL 136 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcccc
Confidence 4689999999 5788899999999999999999999999963
No 132
>PRK10976 putative hydrolase; Provisional
Probab=68.82 E-value=7.7 Score=41.76 Aligned_cols=41 Identities=15% Similarity=0.186 Sum_probs=38.0
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
.+-+...++|++++++|+++++.||-....+..+.+++|+.
T Consensus 19 ~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 59 (266)
T PRK10976 19 TLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIK 59 (266)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCC
Confidence 47788999999999999999999999999999999999874
No 133
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=68.48 E-value=6.2 Score=43.39 Aligned_cols=46 Identities=22% Similarity=0.306 Sum_probs=42.5
Q ss_pred cccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCC
Q psy886 722 GMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFT 767 (962)
Q Consensus 722 ~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~ 767 (962)
...+++.+++.++++.|++.|++++++||-...++..+.+.+|+..
T Consensus 183 ~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~ 228 (300)
T PHA02530 183 VKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTD 228 (300)
T ss_pred cccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcC
Confidence 3578999999999999999999999999999999999999998863
No 134
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=68.18 E-value=8.5 Score=39.98 Aligned_cols=42 Identities=24% Similarity=0.343 Sum_probs=39.6
Q ss_pred CCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 725 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 725 D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
.++.||+.+.++.|++.|+++.++|+-....+..+-+..|+.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~ 127 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWT 127 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhh
Confidence 378999999999999999999999999999999999999986
No 135
>PRK10444 UMP phosphatase; Provisional
Probab=68.05 E-value=5.1 Score=42.73 Aligned_cols=47 Identities=19% Similarity=0.296 Sum_probs=40.3
Q ss_pred EEecccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHc---CC
Q psy886 719 GVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRI---GV 765 (962)
Q Consensus 719 Gl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~---GI 765 (962)
|.+.-.+.+=|++.++|+.|++.|++++.+|+....+...+++++ |+
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~ 59 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGV 59 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCC
Confidence 444445678899999999999999999999999999998888875 66
No 136
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=66.44 E-value=8.4 Score=41.68 Aligned_cols=39 Identities=18% Similarity=0.258 Sum_probs=36.4
Q ss_pred CCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCC
Q psy886 727 PRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGV 765 (962)
Q Consensus 727 lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI 765 (962)
+-+.+.++|++|+++||++++.||=....+..+++++|+
T Consensus 25 i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~ 63 (271)
T PRK03669 25 DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGL 63 (271)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCC
Confidence 446789999999999999999999999999999999997
No 137
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=66.06 E-value=7 Score=41.96 Aligned_cols=40 Identities=20% Similarity=0.272 Sum_probs=32.7
Q ss_pred CCccHHHHHHHHHHcCCEEEEEcCCCHHH---HHHHHHHcCCC
Q psy886 727 PRKEVFDSIARCRAAGIRVIVITGDNKAT---AEAICRRIGVF 766 (962)
Q Consensus 727 lR~~v~eaI~~l~~AGI~v~MiTGD~~~T---A~~IA~~~GI~ 766 (962)
+=|++.++|++||++|++++.+||....+ ....-+++|+.
T Consensus 22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 77899999999999999999999977665 44445567874
No 138
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=66.04 E-value=3.6 Score=44.06 Aligned_cols=61 Identities=16% Similarity=0.271 Sum_probs=43.0
Q ss_pred CCHHHHHHHHHHcCCCCC------CccccCCCCCcCcEEEeccChhHHHHhhcccccccCChhHHHH
Q psy886 751 DNKATAEAICRRIGVFTE------EEDTTGKSYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVA 811 (962)
Q Consensus 751 D~~~TA~~IA~~~GI~~~------~~~~~g~~l~~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~ 811 (962)
++......+++..|+... |..++-..++.|+.|+|||++++..|++||.+..+++=..+..
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~n~~dGV~~ 254 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDSNNEDGVAL 254 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecCCCCcchhh
Confidence 345555667777787432 3334444567999999999999999999999987765554443
No 139
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=65.89 E-value=9.9 Score=40.96 Aligned_cols=41 Identities=24% Similarity=0.456 Sum_probs=37.9
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
.+.+...++|++++++|+++++.||=....+..+.+++|+.
T Consensus 20 ~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 60 (272)
T PRK10530 20 TILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALALD 60 (272)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCC
Confidence 47788999999999999999999999999999999999874
No 140
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=65.69 E-value=11 Score=40.90 Aligned_cols=42 Identities=19% Similarity=0.279 Sum_probs=39.1
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFT 767 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~ 767 (962)
++.||+.+.++.|++.|+++.++|+.....+..+-+..||..
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~ 183 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRS 183 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChh
Confidence 578999999999999999999999999999999999999853
No 141
>PLN02645 phosphoglycolate phosphatase
Probab=65.63 E-value=6.6 Score=43.50 Aligned_cols=45 Identities=13% Similarity=0.220 Sum_probs=37.5
Q ss_pred ccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHH---HHcCCCC
Q psy886 723 MLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAIC---RRIGVFT 767 (962)
Q Consensus 723 i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA---~~~GI~~ 767 (962)
-.+.+=|+++++|+.||+.|++++++|+....+...++ +++|+..
T Consensus 41 ~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~ 88 (311)
T PLN02645 41 KGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNV 88 (311)
T ss_pred eCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCC
Confidence 34556699999999999999999999999988877777 5678743
No 142
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=65.58 E-value=9.5 Score=36.93 Aligned_cols=41 Identities=27% Similarity=0.397 Sum_probs=34.0
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCH---------------HHHHHHHHHcCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNK---------------ATAEAICRRIGVF 766 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~---------------~TA~~IA~~~GI~ 766 (962)
++.||+.++++.|++.|+++.++|.... .....+.+++|+.
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~ 82 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVA 82 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCc
Confidence 4789999999999999999999998662 4456677888874
No 143
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=65.39 E-value=9.5 Score=40.72 Aligned_cols=42 Identities=24% Similarity=0.336 Sum_probs=38.1
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFT 767 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~ 767 (962)
+|.||+.+.++.|++.|+++.++|+.....+..+-++.|+..
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~ 140 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQG 140 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcC
Confidence 468999999999999999999999999999999988888754
No 144
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=64.87 E-value=11 Score=40.43 Aligned_cols=42 Identities=12% Similarity=0.087 Sum_probs=38.9
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFT 767 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~ 767 (962)
++.||+.+.++.|++.|+++.++|+-....+..+-+.+|+..
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~ 150 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEG 150 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHh
Confidence 568999999999999999999999999999999999999853
No 145
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=63.53 E-value=12 Score=39.41 Aligned_cols=41 Identities=12% Similarity=0.285 Sum_probs=36.5
Q ss_pred CCccHHHHHHHHHHcCCEEEEEcCC----CHHHHHHHHHHcCCCC
Q psy886 727 PRKEVFDSIARCRAAGIRVIVITGD----NKATAEAICRRIGVFT 767 (962)
Q Consensus 727 lR~~v~eaI~~l~~AGI~v~MiTGD----~~~TA~~IA~~~GI~~ 767 (962)
+.+++++.++.+++.|+++.++|+= ...++..+.+.+|+..
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~ 159 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPA 159 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCch
Confidence 4556999999999999999999996 7779999999999954
No 146
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=63.30 E-value=12 Score=37.63 Aligned_cols=39 Identities=18% Similarity=0.232 Sum_probs=34.3
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
++.||+.++++.|++.|+++.++|+- ..+..+-+..|+.
T Consensus 88 ~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~ 126 (185)
T TIGR02009 88 EVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLT 126 (185)
T ss_pred CCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChH
Confidence 68999999999999999999999986 5677777888874
No 147
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=63.27 E-value=8.9 Score=36.21 Aligned_cols=39 Identities=13% Similarity=0.170 Sum_probs=35.1
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCC-CHHHHHHHHHHcC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGD-NKATAEAICRRIG 764 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD-~~~TA~~IA~~~G 764 (962)
++.+++.+.++.|+++|+++.++|+- .+..+..+-+..|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 78999999999999999999999999 7877777777666
No 148
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=63.27 E-value=12 Score=39.23 Aligned_cols=42 Identities=19% Similarity=0.095 Sum_probs=38.1
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFT 767 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~ 767 (962)
++.||+.+.++.|++.|+++.++|+.+...+..+-++.|+..
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~ 136 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQ 136 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchh
Confidence 578999999999999999999999999998888888888753
No 149
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=61.85 E-value=13 Score=38.63 Aligned_cols=38 Identities=26% Similarity=0.369 Sum_probs=35.3
Q ss_pred ccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 729 KEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 729 ~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
+.+.++|++++++||++++.||=....+..+.+++|+.
T Consensus 19 ~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 19 QPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 34889999999999999999999999999999999974
No 150
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=61.30 E-value=11 Score=39.93 Aligned_cols=49 Identities=12% Similarity=0.177 Sum_probs=37.9
Q ss_pred EEecccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHH--HHHHHcCCCC
Q psy886 719 GVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAE--AICRRIGVFT 767 (962)
Q Consensus 719 Gl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~--~IA~~~GI~~ 767 (962)
|.+.-.+.+-|++++++++|+++|+++.++|.-....+. ...+++|+..
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~ 67 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINA 67 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCc
Confidence 344445778999999999999999999999995544443 4568889864
No 151
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=60.83 E-value=14 Score=39.31 Aligned_cols=44 Identities=7% Similarity=0.031 Sum_probs=36.3
Q ss_pred cCCCCccHHHHHHHHHHcCCEEEEEcC---CCHHHHHHHHHHcCCCC
Q psy886 724 LDPPRKEVFDSIARCRAAGIRVIVITG---DNKATAEAICRRIGVFT 767 (962)
Q Consensus 724 ~D~lR~~v~eaI~~l~~AGI~v~MiTG---D~~~TA~~IA~~~GI~~ 767 (962)
.+.+=+++.++|++|++.|++++.+|| -.++.....-+++|+-.
T Consensus 15 ~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~ 61 (249)
T TIGR01457 15 GKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPA 61 (249)
T ss_pred CCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 455567999999999999999999997 55777777778888753
No 152
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=60.82 E-value=21 Score=35.78 Aligned_cols=62 Identities=29% Similarity=0.432 Sum_probs=47.8
Q ss_pred CccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCccccCCCCCcCcEEEeccChhHHHHhhcccccccCChh
Q psy886 728 RKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSKAEIGIAMGSGTAVAKSASEMVLADDNFS 807 (962)
Q Consensus 728 R~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~~~~~~g~~l~~AdVGIAmg~gtdvAkeaADivL~dd~f~ 807 (962)
.+|....|+++++.|+++++ |+. .+..+|++.|+.. ++...+-.
T Consensus 111 ~~e~~~~i~~~~~~G~~viV--Gg~--~~~~~A~~~gl~~--------------------------------v~i~sg~e 154 (176)
T PF06506_consen 111 EEEIEAAIKQAKAEGVDVIV--GGG--VVCRLARKLGLPG--------------------------------VLIESGEE 154 (176)
T ss_dssp HHHHHHHHHHHHHTT--EEE--ESH--HHHHHHHHTTSEE--------------------------------EESS--HH
T ss_pred HHHHHHHHHHHHHcCCcEEE--CCH--HHHHHHHHcCCcE--------------------------------EEEEecHH
Confidence 56889999999999988887 665 3578889998842 56667788
Q ss_pred HHHHHHHHhHHHHHHHHH
Q psy886 808 SIVAAVEEGRAIYNNMKQ 825 (962)
Q Consensus 808 ~iv~ai~~gR~i~~ni~k 825 (962)
+|..|+++++++.+..++
T Consensus 155 si~~Al~eA~~i~~~~~~ 172 (176)
T PF06506_consen 155 SIRRALEEALRIARARRR 172 (176)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999998875
No 153
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=60.63 E-value=15 Score=39.16 Aligned_cols=42 Identities=14% Similarity=0.272 Sum_probs=38.9
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFT 767 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~ 767 (962)
++.||+.++++.|++.|+++.++|+-....+..+-+..||..
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~ 149 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSD 149 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChh
Confidence 478999999999999999999999999999999999999853
No 154
>PRK11587 putative phosphatase; Provisional
Probab=60.05 E-value=12 Score=38.78 Aligned_cols=40 Identities=15% Similarity=0.184 Sum_probs=34.7
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGV 765 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI 765 (962)
++.||+.+.++.|+++|+++.++|+.....+..+-+..|+
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l 122 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL 122 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC
Confidence 4789999999999999999999999887777666666776
No 155
>KOG3040|consensus
Probab=59.78 E-value=19 Score=36.41 Aligned_cols=51 Identities=18% Similarity=0.339 Sum_probs=44.4
Q ss_pred EEEEEecccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH---cCCC
Q psy886 716 TFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRR---IGVF 766 (962)
Q Consensus 716 ~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~---~GI~ 766 (962)
.+-|.+.++|-.=|++.||++.||.++.+|.-+|--..+.-..+.++ ||+-
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~ 66 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFD 66 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCC
Confidence 35699999999999999999999999999999998888887777765 5653
No 156
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=58.22 E-value=18 Score=37.90 Aligned_cols=42 Identities=17% Similarity=0.215 Sum_probs=37.6
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFT 767 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~ 767 (962)
++.||+.+.++.|++.|+++.++|.-..+.+...-+..|+..
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~ 134 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDA 134 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHH
Confidence 578999999999999999999999999888888878888743
No 157
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=55.87 E-value=14 Score=34.31 Aligned_cols=40 Identities=20% Similarity=0.316 Sum_probs=31.2
Q ss_pred CCccHHHHHHHHHHcCC-EEEEEcCCCHHHHHHHHHHcCCC
Q psy886 727 PRKEVFDSIARCRAAGI-RVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 727 lR~~v~eaI~~l~~AGI-~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
+.+.+++.+++|.+.|+ .+|+.+|...+.+...|++.||-
T Consensus 64 ~~~~~~~~v~~~~~~g~~~v~~~~g~~~~~~~~~a~~~gi~ 104 (116)
T PF13380_consen 64 PPDKVPEIVDEAAALGVKAVWLQPGAESEELIEAAREAGIR 104 (116)
T ss_dssp -HHHHHHHHHHHHHHT-SEEEE-TTS--HHHHHHHHHTT-E
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEcchHHHHHHHHHHHcCCE
Confidence 56788999999999999 59999999999999999998873
No 158
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=55.86 E-value=17 Score=36.42 Aligned_cols=39 Identities=8% Similarity=0.261 Sum_probs=32.2
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
++.||+.++++.|+++|+++.++|+-.. +..+-+..|+.
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~ 125 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLI 125 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcH
Confidence 5789999999999999999999997432 45677778874
No 159
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=55.48 E-value=19 Score=38.53 Aligned_cols=84 Identities=12% Similarity=0.064 Sum_probs=53.9
Q ss_pred HHHHHHHHHHcCCEE--------EEEcCCCHHHH-HHHHHHcCCC--CC------CccccCCCCCcCcEEEeccChh---
Q psy886 731 VFDSIARCRAAGIRV--------IVITGDNKATA-EAICRRIGVF--TE------EEDTTGKSYSKAEIGIAMGSGT--- 790 (962)
Q Consensus 731 v~eaI~~l~~AGI~v--------~MiTGD~~~TA-~~IA~~~GI~--~~------~~~~~g~~l~~AdVGIAmg~gt--- 790 (962)
.....+.+++.|+.+ ++--|-+..+| ..+++..||. .. |..++-.-++.|+.|||||++.
T Consensus 147 ~~~~~~~~~~~~~~~~~s~~~~ei~~~~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~ 226 (256)
T TIGR01486 147 RERFTEALVELGLEVTHGNRFYHVLGAGSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPN 226 (256)
T ss_pred HHHHHHHHHHcCCEEEeCCceEEEecCCCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCc
Confidence 444555555556643 23346666676 7788899986 32 2233444567999999999877
Q ss_pred HHHHhh---cccccccCChhHHHHHHH
Q psy886 791 AVAKSA---SEMVLADDNFSSIVAAVE 814 (962)
Q Consensus 791 dvAkea---ADivL~dd~f~~iv~ai~ 814 (962)
+..|+. ++.|-.+++=..+..+++
T Consensus 227 ~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 227 VSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred cccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 467886 446666666666776665
No 160
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=53.95 E-value=20 Score=38.59 Aligned_cols=41 Identities=24% Similarity=0.329 Sum_probs=35.8
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
++-||+.+.++.|++.|+++.++||.....+..+-+..|+.
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~ 141 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQ 141 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhc
Confidence 46899999999999999999999999998888777766653
No 161
>PRK06769 hypothetical protein; Validated
Probab=53.18 E-value=20 Score=35.86 Aligned_cols=27 Identities=15% Similarity=0.106 Sum_probs=25.0
Q ss_pred CCccHHHHHHHHHHcCCEEEEEcCCCH
Q psy886 727 PRKEVFDSIARCRAAGIRVIVITGDNK 753 (962)
Q Consensus 727 lR~~v~eaI~~l~~AGI~v~MiTGD~~ 753 (962)
+.||++++++.|++.|+++.++|+...
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~ 55 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPG 55 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCch
Confidence 689999999999999999999998764
No 162
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=51.64 E-value=28 Score=37.83 Aligned_cols=41 Identities=15% Similarity=0.258 Sum_probs=37.5
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
..-+.+.++|++|++.||.|++.||=.......+.+++|+-
T Consensus 18 ~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~ 58 (302)
T PRK12702 18 NSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLE 58 (302)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence 35567999999999999999999999999999999999974
No 163
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=49.92 E-value=18 Score=34.16 Aligned_cols=33 Identities=21% Similarity=0.372 Sum_probs=29.2
Q ss_pred CCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHH
Q psy886 725 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAE 757 (962)
Q Consensus 725 D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~ 757 (962)
|++.+++.++++.+++.|++++.+||=......
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTYE 55 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhhh
Confidence 678999999999999999999999998776543
No 164
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=49.91 E-value=24 Score=34.22 Aligned_cols=40 Identities=15% Similarity=0.144 Sum_probs=36.8
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
++||++.+.++.|+ .++++.+.|.=....|..+-+.+|+.
T Consensus 45 ~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~ 84 (148)
T smart00577 45 KKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPK 84 (148)
T ss_pred EECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcC
Confidence 47999999999999 57999999999999999999999874
No 165
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=49.01 E-value=18 Score=35.58 Aligned_cols=34 Identities=15% Similarity=0.160 Sum_probs=31.2
Q ss_pred cCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHH
Q psy886 724 LDPPRKEVFDSIARCRAAGIRVIVITGDNKATAE 757 (962)
Q Consensus 724 ~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~ 757 (962)
+|.+.++++++++++++.|++++.+||=....+.
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~ 58 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQAD 58 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHH
Confidence 4788999999999999999999999999988874
No 166
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=49.00 E-value=29 Score=39.37 Aligned_cols=41 Identities=15% Similarity=0.111 Sum_probs=38.5
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
++.||+.+.++.|+++|+++.++|+-....+..+=+..||.
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~ 256 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIR 256 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCH
Confidence 47899999999999999999999999999999999999985
No 167
>TIGR03028 EpsE polysaccharide export protein EpsE. Sequences in this family of proteins are members of a polysaccharide export protein family (pfam02563) which includes the wza protein from E.coli. This family of proteins are homologous to the EpsE protein of the methanolan biosynthesis operon of Methylobacillus species strain 12S. The distribution of this protein appears to be restricted to a subset of exopolysaccharide operons containing a syntenic grouping of genes including a variant of the EpsH exosortase protein. Exosortase has been proposed to be involved in the targetting and processing of proteins containing the PEP-CTERM domain to the exopolysaccharide layer.
Probab=48.36 E-value=21 Score=37.75 Aligned_cols=32 Identities=19% Similarity=0.171 Sum_probs=18.1
Q ss_pred CccceeeeCCcc---ceeeeccc-ccCCCCEEEeCC
Q psy886 247 PEMGKVIRGDKS---GVQKVRAK-EIVPGDIVEVSV 278 (962)
Q Consensus 247 ~~~a~ViR~g~~---~~~~I~~~-~Lv~GDIV~l~~ 278 (962)
+..+.++|.+.+ ....++.. .|.|||+|++.+
T Consensus 201 ~~~v~i~R~~~~g~~~~~~~~~~~~l~~gDii~V~~ 236 (239)
T TIGR03028 201 ERGIRVMRRDDKGAVEEVSGELGDLVQPDDVIYVRE 236 (239)
T ss_pred cceEEEEEECCCCcEEEEecCCCcccCCCCEEEEeC
Confidence 455677775321 12233333 388888888764
No 168
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=47.05 E-value=29 Score=40.75 Aligned_cols=41 Identities=7% Similarity=0.002 Sum_probs=39.0
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
+|.||+.+.++.||+.|+++.++|+-....+..+-+.+|+.
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~ 370 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLD 370 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcH
Confidence 57999999999999999999999999999999999999985
No 169
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=46.86 E-value=31 Score=35.20 Aligned_cols=84 Identities=15% Similarity=0.192 Sum_probs=52.0
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCC-CccccCCCCCcCcEEEeccChhH----HH----Hhh
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTE-EEDTTGKSYSKAEIGIAMGSGTA----VA----KSA 796 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~-~~~~~g~~l~~AdVGIAmg~gtd----vA----kea 796 (962)
++-||+.++++.|++.|+++.++|+-... ...+-+.+|+... +.... ..++|..- ...+ ++ ...
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~-----s~~~~~~K-P~~~~~~~~~~~~~~~~ 177 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVT-----SYEVGAEK-PDPKIFQEALERAGISP 177 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEe-----ecccCCCC-CCHHHHHHHHHHcCCCh
Confidence 57899999999999999999999975543 4667777887321 11111 11122110 0111 11 123
Q ss_pred cccccccCCh-hHHHHHHHHh
Q psy886 797 SEMVLADDNF-SSIVAAVEEG 816 (962)
Q Consensus 797 ADivL~dd~f-~~iv~ai~~g 816 (962)
++++..+|++ ..|..|-..|
T Consensus 178 ~~~~~IgD~~~~Di~~A~~aG 198 (203)
T TIGR02252 178 EEALHIGDSLRNDYQGARAAG 198 (203)
T ss_pred hHEEEECCCchHHHHHHHHcC
Confidence 6688888887 6777776655
No 170
>PF01079 Hint: Hint module; InterPro: IPR001767 This domain identifies a group of cysteine peptidases correspond to MEROPS peptidase family C46 (clan CH). The type example is the Hedgehog protein from Drosophila melanogaster (Fruit fly). These are involved in intracellular signalling required for a variety of patterning events during development. The hedgehog family of proteins self process by a cysteine-dependent mechanism, which is a one-time autolytic cleavage. It is differentiated from a typical peptidase reaction by the fact that the newly-formed carboxyl group is esterified with cholesterol, rather than being left free. The three-dimensional structure of the autolytic domain of the hedgehog protein of D. melanogaster shows that it is formed from two divergent copies of a module that also occurs in inteins, called a Hint domain [,].; GO: 0008233 peptidase activity, 0006508 proteolysis; PDB: 3K7H_B 3K7I_B 3K7G_B 1AT0_A 3MXW_A 3M1N_B 3HO5_H 2WFR_A 2WFQ_A 2WG3_B ....
Probab=45.81 E-value=1.1e+02 Score=31.74 Aligned_cols=40 Identities=20% Similarity=0.241 Sum_probs=21.6
Q ss_pred CCeEEEEECCCccEEEEeCCCCCCCCEEEEcC--CCccCCCceEE
Q psy886 133 PEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSV--GDKIPADIRLI 175 (962)
Q Consensus 133 ~~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~--G~~iP~Dg~v~ 175 (962)
|..++|...++ ..++.+||++||.|+... |+.+..+-+..
T Consensus 14 pg~a~V~~~~G---~~k~m~~L~iGD~Vla~d~~G~~~yS~V~~f 55 (217)
T PF01079_consen 14 PGDATVTLEDG---GRKRMSDLKIGDRVLAVDSDGKLVYSPVIMF 55 (217)
T ss_dssp -TT-EEEBTTS----EEEGGG--TT-EEEEE-TTS-EEEEEEEEE
T ss_pred CCCCEEEeCCC---CEeEHHHCCCCCEEEEecCCCcEEEEeEEEE
Confidence 45667776554 468999999999998854 55454444443
No 171
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=45.79 E-value=29 Score=37.46 Aligned_cols=86 Identities=9% Similarity=0.001 Sum_probs=52.0
Q ss_pred ccHHHHHHHHHHcCCEEE--------EEcCCCHHHHHHHHHHcCCCC-CCcc------ccCCCCCcCcEEEeccChhHHH
Q psy886 729 KEVFDSIARCRAAGIRVI--------VITGDNKATAEAICRRIGVFT-EEED------TTGKSYSKAEIGIAMGSGTAVA 793 (962)
Q Consensus 729 ~~v~eaI~~l~~AGI~v~--------MiTGD~~~TA~~IA~~~GI~~-~~~~------~~g~~l~~AdVGIAmg~gtdvA 793 (962)
+......+.++..|+.++ +--|++......+++..|+.. .+-. ++-..++.|++|+||++|.+..
T Consensus 160 ~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~ 239 (273)
T PRK00192 160 AAKERFEEALKRLGLKVTRGGRFLHLLGGGDKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPN 239 (273)
T ss_pred HHHHHHHHHHHHcCCEEEECCeEEEEeCCCCHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCC
Confidence 344455556666677632 112344444457788888866 4322 3334457999999999999999
Q ss_pred H----hhc-ccccc--cCChhHHHHHHH
Q psy886 794 K----SAS-EMVLA--DDNFSSIVAAVE 814 (962)
Q Consensus 794 k----eaA-DivL~--dd~f~~iv~ai~ 814 (962)
| ++| +.|-. ..+=..+.++++
T Consensus 240 k~~~~~~a~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 240 PPLLPGIADGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred cccCccccCCceEEecCCCcHHHHHHHH
Confidence 9 666 55552 333345555544
No 172
>PLN02887 hydrolase family protein
Probab=45.68 E-value=29 Score=41.78 Aligned_cols=41 Identities=12% Similarity=0.280 Sum_probs=38.1
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
.+-+...++|+++++.|+++++.||-....+..+.+++|+.
T Consensus 325 ~Is~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~L~l~ 365 (580)
T PLN02887 325 QISETNAKALKEALSRGVKVVIATGKARPAVIDILKMVDLA 365 (580)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCcc
Confidence 47888999999999999999999999999999999999874
No 173
>PRK09449 dUMP phosphatase; Provisional
Probab=45.33 E-value=32 Score=35.69 Aligned_cols=40 Identities=15% Similarity=0.214 Sum_probs=35.2
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
++.||+.++++.|+ +|+++.++|......+...=++.|+.
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~ 134 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLR 134 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChH
Confidence 47899999999999 68999999998888888877888874
No 174
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=44.95 E-value=43 Score=32.93 Aligned_cols=41 Identities=22% Similarity=0.417 Sum_probs=37.5
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
..-|++.+=++.++.+|+++.+++--++..+...++.+|+.
T Consensus 46 ~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~ 86 (175)
T COG2179 46 DATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVP 86 (175)
T ss_pred CCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCc
Confidence 35688899999999999999999999999999999999984
No 175
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=44.31 E-value=21 Score=36.68 Aligned_cols=29 Identities=24% Similarity=0.340 Sum_probs=25.9
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHH
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKA 754 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~ 754 (962)
++.|++.+.++.|++.|+++.++|.....
T Consensus 94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~ 122 (211)
T TIGR02247 94 KLRPSMMAAIKTLRAKGFKTACITNNFPT 122 (211)
T ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 57899999999999999999999986543
No 176
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=43.73 E-value=35 Score=33.68 Aligned_cols=41 Identities=20% Similarity=0.340 Sum_probs=33.4
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCC---------------CHHHHHHHHHHcCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGD---------------NKATAEAICRRIGVF 766 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD---------------~~~TA~~IA~~~GI~ 766 (962)
++-|++.+++++|++.|+++.++|-- ....+..+-++.|+.
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~ 84 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII 84 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc
Confidence 46799999999999999999999974 244567777777774
No 177
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=42.84 E-value=41 Score=32.48 Aligned_cols=38 Identities=18% Similarity=0.287 Sum_probs=33.7
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHc
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRI 763 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~ 763 (962)
+..+|+.+.++.|++.|+++.++|+-....+...-+..
T Consensus 64 ~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~ 101 (154)
T TIGR01549 64 AYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH 101 (154)
T ss_pred eeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH
Confidence 34579999999999999999999999999988887775
No 178
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=42.53 E-value=41 Score=33.74 Aligned_cols=26 Identities=38% Similarity=0.597 Sum_probs=24.5
Q ss_pred CCccHHHHHHHHHHcCCEEEEEcCCC
Q psy886 727 PRKEVFDSIARCRAAGIRVIVITGDN 752 (962)
Q Consensus 727 lR~~v~eaI~~l~~AGI~v~MiTGD~ 752 (962)
+.||+.+++++|++.|+++.++|...
T Consensus 30 ~~pgv~e~L~~Lk~~g~~l~I~Tn~~ 55 (181)
T PRK08942 30 PIPGSIEAIARLKQAGYRVVVATNQS 55 (181)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 68999999999999999999999876
No 179
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=42.46 E-value=35 Score=35.24 Aligned_cols=41 Identities=17% Similarity=0.300 Sum_probs=37.2
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFT 767 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~ 767 (962)
++.|++.+.++.|++. +++.++|+-....+..+-++.|+..
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~ 137 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFP 137 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHh
Confidence 5789999999999999 9999999999999999999999843
No 180
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=42.08 E-value=42 Score=35.17 Aligned_cols=31 Identities=16% Similarity=0.310 Sum_probs=28.1
Q ss_pred CCCCccHHHHHHHHHHcCCEEEEEcCCCHHH
Q psy886 725 DPPRKEVFDSIARCRAAGIRVIVITGDNKAT 755 (962)
Q Consensus 725 D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~T 755 (962)
-|+-|++.++++.+++.|++|+.+||=....
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~ 149 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEEL 149 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHH
Confidence 3788999999999999999999999998755
No 181
>PLN02811 hydrolase
Probab=41.01 E-value=34 Score=35.55 Aligned_cols=32 Identities=19% Similarity=0.207 Sum_probs=27.9
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHH
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAE 757 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~ 757 (962)
++.||+.+.++.|++.|+++.++||-......
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~ 109 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFD 109 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHH
Confidence 47899999999999999999999998765443
No 182
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=40.90 E-value=23 Score=35.47 Aligned_cols=26 Identities=15% Similarity=0.337 Sum_probs=23.7
Q ss_pred CCccHHHHHHHHHHcCCEEEEEcCCC
Q psy886 727 PRKEVFDSIARCRAAGIRVIVITGDN 752 (962)
Q Consensus 727 lR~~v~eaI~~l~~AGI~v~MiTGD~ 752 (962)
+.|++.++++.|+++|+++.++|.=.
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~ 52 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQS 52 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 57899999999999999999999754
No 183
>PF03120 DNA_ligase_OB: NAD-dependent DNA ligase OB-fold domain; InterPro: IPR004150 DNA ligases catalyse the crucial step of joining the breaks in duplex DNA during DNA replication, repair and recombination, utilizing either ATP or NAD(+) as a cofactor []. This family is a small domain found after the adenylation domain DNA_ligase_N in NAD+-dependent ligases (IPR001679 from INTERPRO). OB-fold domains generally are involved in nucleic acid binding.; GO: 0003911 DNA ligase (NAD+) activity, 0006260 DNA replication, 0006281 DNA repair; PDB: 2OWO_A 1TAE_A 3UQ8_A 1DGS_A 1V9P_B 3SGI_A.
Probab=40.69 E-value=12 Score=32.24 Aligned_cols=22 Identities=41% Similarity=0.625 Sum_probs=16.4
Q ss_pred EeCCCCCCCCEEEE-cCCCccCC
Q psy886 149 VRAKEIVPGDIVEV-SVGDKIPA 170 (962)
Q Consensus 149 i~~~~l~~GDiv~v-~~G~~iP~ 170 (962)
+.-.+|.+||.|.| ++||.||-
T Consensus 45 i~~~~i~~Gd~V~V~raGdVIP~ 67 (82)
T PF03120_consen 45 IKELDIRIGDTVLVTRAGDVIPK 67 (82)
T ss_dssp HHHTT-BBT-EEEEEEETTTEEE
T ss_pred HHHcCCCCCCEEEEEECCCccce
Confidence 34567999999988 78999994
No 184
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=40.63 E-value=45 Score=33.10 Aligned_cols=40 Identities=15% Similarity=0.254 Sum_probs=31.8
Q ss_pred CCccHHHHHHHHHHcCCEEEEEcCCCH------------HHHHHHHHHcCCC
Q psy886 727 PRKEVFDSIARCRAAGIRVIVITGDNK------------ATAEAICRRIGVF 766 (962)
Q Consensus 727 lR~~v~eaI~~l~~AGI~v~MiTGD~~------------~TA~~IA~~~GI~ 766 (962)
+-||+.++++.|+++|+++.++|.-.. .....+-+.+|+.
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~ 94 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP 94 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC
Confidence 459999999999999999999996443 2355677888873
No 185
>PF15584 Imm44: Immunity protein 44
Probab=40.48 E-value=14 Score=32.05 Aligned_cols=20 Identities=25% Similarity=0.308 Sum_probs=16.3
Q ss_pred CCCEEEEcCCCccCCCceEE
Q psy886 156 PGDIVEVSVGDKIPADIRLI 175 (962)
Q Consensus 156 ~GDiv~v~~G~~iP~Dg~v~ 175 (962)
+.+-.+|+.|++|||||+=-
T Consensus 13 ~~~~~~I~SG~~iP~~GIwE 32 (94)
T PF15584_consen 13 PSEGGVIKSGQEIPCDGIWE 32 (94)
T ss_pred CCCCCEEecCCCcccCCeEc
Confidence 45567889999999999854
No 186
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=39.29 E-value=56 Score=34.12 Aligned_cols=39 Identities=10% Similarity=0.126 Sum_probs=33.8
Q ss_pred CCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHc
Q psy886 725 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRI 763 (962)
Q Consensus 725 D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~ 763 (962)
-++.||+.+++++|+++|+++.++|.........+-+..
T Consensus 94 ~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~ 132 (220)
T TIGR01691 94 SHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHS 132 (220)
T ss_pred cCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhc
Confidence 468999999999999999999999998887777665554
No 187
>PLN02940 riboflavin kinase
Probab=39.00 E-value=41 Score=38.45 Aligned_cols=41 Identities=15% Similarity=0.127 Sum_probs=35.4
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHH-HcCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICR-RIGVF 766 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~-~~GI~ 766 (962)
++.||+.+.++.|++.|+++.++|+-....+...-+ ..|+.
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~ 134 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWK 134 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChH
Confidence 468999999999999999999999998888876654 67773
No 188
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=38.24 E-value=35 Score=36.73 Aligned_cols=45 Identities=24% Similarity=0.365 Sum_probs=39.2
Q ss_pred EEecccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHc
Q psy886 719 GVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRI 763 (962)
Q Consensus 719 Gl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~ 763 (962)
|.+.--+.+=|++.++|+.|+++|++++.+|--...+...+++++
T Consensus 17 Gvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L 61 (269)
T COG0647 17 GVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARL 61 (269)
T ss_pred CceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Confidence 666677888999999999999999999999999888888666554
No 189
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=37.11 E-value=33 Score=37.24 Aligned_cols=44 Identities=14% Similarity=0.147 Sum_probs=33.1
Q ss_pred cCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHH---HHHHcCCCC
Q psy886 724 LDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEA---ICRRIGVFT 767 (962)
Q Consensus 724 ~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~---IA~~~GI~~ 767 (962)
.+.+=+++.++|++|++.|++++.+|+-...+... --+++|+..
T Consensus 16 ~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~ 62 (279)
T TIGR01452 16 GERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNG 62 (279)
T ss_pred CCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 46677889999999999999999999965433333 235578753
No 190
>TIGR00266 conserved hypothetical protein TIGR00266.
Probab=36.76 E-value=1.1e+02 Score=32.03 Aligned_cols=45 Identities=20% Similarity=0.183 Sum_probs=29.2
Q ss_pred CCCCCCEEEEcCCCccCCCceEEeeec---ce-eeeecccccCCCcceee
Q psy886 153 EIVPGDIVEVSVGDKIPADIRLIKIYS---TT-IRIDQSILTGESVSVIK 198 (962)
Q Consensus 153 ~l~~GDiv~v~~G~~iP~Dg~v~~G~~---~~-~~vdes~lTGEs~Pv~k 198 (962)
+|.+|+-|..++|..+--++-|---.. +- --+ -.++|||+.++..
T Consensus 17 ~L~~ge~v~ae~GaMv~~~~~v~~~~~~~gG~~~~l-~r~~~GEs~f~~~ 65 (222)
T TIGR00266 17 TLKPGERVLAETGAMVSMDGGVELSTECGGGLLGAL-KRSLGGESLFLNA 65 (222)
T ss_pred EECCCCEEEEecCeEEEecCCeEEEEEECChHHHHH-HHHhcCCceEEEE
Confidence 355999999999999888887662100 00 001 3367888887775
No 191
>PTZ00445 p36-lilke protein; Provisional
Probab=36.04 E-value=57 Score=33.59 Aligned_cols=29 Identities=17% Similarity=0.112 Sum_probs=25.7
Q ss_pred CCccHHHHHHHHHHcCCEEEEEcCCCHHH
Q psy886 727 PRKEVFDSIARCRAAGIRVIVITGDNKAT 755 (962)
Q Consensus 727 lR~~v~eaI~~l~~AGI~v~MiTGD~~~T 755 (962)
++|+.++-+++|+++||+|.++|=-.+++
T Consensus 76 ~tpefk~~~~~l~~~~I~v~VVTfSd~~~ 104 (219)
T PTZ00445 76 VTPDFKILGKRLKNSNIKISVVTFSDKEL 104 (219)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEEccchhh
Confidence 79999999999999999999999655544
No 192
>COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis]
Probab=35.79 E-value=36 Score=30.35 Aligned_cols=30 Identities=30% Similarity=0.502 Sum_probs=24.2
Q ss_pred eEEEEECCCccEEEEeCCCCCCCCEEEEcCCCc
Q psy886 135 MGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDK 167 (962)
Q Consensus 135 ~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~G~~ 167 (962)
.=+|.-||+ ...|+.++.+||+|.|+-|..
T Consensus 33 ~GrV~vNG~---~aKpS~~VK~GD~l~i~~~~~ 62 (100)
T COG1188 33 GGRVKVNGQ---RAKPSKEVKVGDILTIRFGNK 62 (100)
T ss_pred CCeEEECCE---EcccccccCCCCEEEEEeCCc
Confidence 345666776 558999999999999998874
No 193
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=35.67 E-value=46 Score=37.43 Aligned_cols=41 Identities=15% Similarity=0.259 Sum_probs=33.8
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCC---------------CHHHHHHHHHHcCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGD---------------NKATAEAICRRIGVF 766 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD---------------~~~TA~~IA~~~GI~ 766 (962)
+|.|++.++++.|+++|+++.++|.= ....+..+.++.|+.
T Consensus 30 ~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~ 85 (354)
T PRK05446 30 AFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIK 85 (354)
T ss_pred eECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCc
Confidence 57999999999999999999999982 244566777888874
No 194
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=35.45 E-value=63 Score=32.94 Aligned_cols=38 Identities=24% Similarity=0.530 Sum_probs=35.0
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHc
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRI 763 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~ 763 (962)
++.+++.+++++|++.|++++++||=....+..+.+++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~ 54 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQL 54 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhC
Confidence 46789999999999999999999999999999998874
No 195
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=34.59 E-value=53 Score=30.39 Aligned_cols=36 Identities=22% Similarity=0.489 Sum_probs=27.7
Q ss_pred CccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCC
Q psy886 728 RKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGV 765 (962)
Q Consensus 728 R~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI 765 (962)
-+++.++++.+|+.|++++-+|++.+ -...|.+-|+
T Consensus 56 t~e~i~~~~~a~~~g~~iI~IT~~~~--l~~~~~~~~~ 91 (119)
T cd05017 56 TEETLSAVEQAKERGAKIVAITSGGK--LLEMAREHGV 91 (119)
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHcCC
Confidence 46788999999999999999999875 2234554453
No 196
>PRK15078 polysaccharide export protein Wza; Provisional
Probab=33.96 E-value=1.2e+02 Score=34.61 Aligned_cols=29 Identities=21% Similarity=0.345 Sum_probs=19.9
Q ss_pred CeEEEEECCCccEEEEeCCC------------CCCCCEEEEcC
Q psy886 134 EMGKVIRGDKSGVQKVRAKE------------IVPGDIVEVSV 164 (962)
Q Consensus 134 ~~~~v~r~~~~~~~~i~~~~------------l~~GDiv~v~~ 164 (962)
..+++.|+|+ ...++..+ |++||+|.|.+
T Consensus 211 ~~V~l~R~g~--~~~i~l~~ll~~g~~~~ni~L~~GDvI~Vp~ 251 (379)
T PRK15078 211 RNVVLTHNGK--EERISLQALMQNGDLSQNRLLYPGDILYVPR 251 (379)
T ss_pred ceEEEEECCe--EEEEEHHHHHhcCCcccCceeCCCCEEEECC
Confidence 4788999987 56676432 66777777754
No 197
>COG0272 Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair]
Probab=33.21 E-value=62 Score=39.02 Aligned_cols=78 Identities=23% Similarity=0.238 Sum_probs=44.9
Q ss_pred eCCCCCCCCEEEE-cCCCccCC-CceEEeeecceeeeecccccCCCcceeecCCCCCC-ccc----ccCCCccccccCcc
Q psy886 150 RAKEIVPGDIVEV-SVGDKIPA-DIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPD-PRA----EKNGPQMCENDRNE 222 (962)
Q Consensus 150 ~~~~l~~GDiv~v-~~G~~iP~-Dg~v~~G~~~~~~vdes~lTGEs~Pv~k~~g~~~~-~~~----~~~~~~~~~~~~~~ 222 (962)
.-.+|++||.|.| ++||+||- ++++.+ -=+|+..|+. .|.-+|. .+. +......|.|...+
T Consensus 364 ~rkdIrIGDtV~V~kAGdVIP~V~~Vv~e-----------~R~~~~~~~~-~P~~CP~C~s~l~r~~~e~~~rC~n~~~C 431 (667)
T COG0272 364 KRKDIRIGDTVVVRKAGDVIPQVVGVVLE-----------KRPGNEKPIP-FPTHCPVCGSELVREEGEVVIRCTNGLNC 431 (667)
T ss_pred HhcCCCCCCEEEEEecCCCCcceeeeecc-----------cCCCCCCCCC-CCCCCCCCCCeeEeccCceeEecCCCCCC
Confidence 3478999999999 78999994 444443 2345555554 4444543 111 12333466664433
Q ss_pred ccccchhHHHHhHHHHHHHHHhcCCccce
Q psy886 223 HKCGRMVQLERNAESAIEALKEYEPEMGK 251 (962)
Q Consensus 223 ~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ 251 (962)
. .+..++|....+..|.
T Consensus 432 ~------------aq~~e~l~hfvSr~Am 448 (667)
T COG0272 432 P------------AQLKERLIHFVSRNAL 448 (667)
T ss_pred h------------HHHhhheeeEecCCcc
Confidence 2 4455666666555554
No 198
>PTZ00174 phosphomannomutase; Provisional
Probab=32.33 E-value=68 Score=34.08 Aligned_cols=32 Identities=22% Similarity=0.485 Sum_probs=28.2
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHH
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAE 757 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~ 757 (962)
++-+...++|+++++.||++++.||-......
T Consensus 22 ~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~ 53 (247)
T PTZ00174 22 PITQEMKDTLAKLKSKGFKIGVVGGSDYPKIK 53 (247)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHH
Confidence 47788999999999999999999999887543
No 199
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=32.18 E-value=23 Score=35.61 Aligned_cols=14 Identities=36% Similarity=0.397 Sum_probs=12.6
Q ss_pred EEecCCCcccCCce
Q psy886 471 ICSDKTGTLTTNQM 484 (962)
Q Consensus 471 I~~DKTGTLT~n~m 484 (962)
+|||++||||.+.+
T Consensus 1 v~fD~DGTL~~~~~ 14 (192)
T PF12710_consen 1 VIFDFDGTLTDSDS 14 (192)
T ss_dssp EEEESBTTTBSSHH
T ss_pred eEEecCcCeecCCC
Confidence 69999999999983
No 200
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=32.12 E-value=74 Score=31.20 Aligned_cols=40 Identities=20% Similarity=0.121 Sum_probs=36.6
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
.+||++.+.++.|++. +++.+.|.=....|..+.+.++..
T Consensus 58 ~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~ 97 (156)
T TIGR02250 58 KLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPD 97 (156)
T ss_pred EECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcC
Confidence 4799999999999955 999999999999999999999864
No 201
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=31.63 E-value=61 Score=35.35 Aligned_cols=38 Identities=29% Similarity=0.426 Sum_probs=33.0
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHc
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRI 763 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~ 763 (962)
++.||+.+.++.|++.|+++.++|+-.......+=+..
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~ 181 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTL 181 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh
Confidence 57899999999999999999999998888777665554
No 202
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=31.23 E-value=1.1e+02 Score=36.58 Aligned_cols=35 Identities=20% Similarity=0.405 Sum_probs=31.0
Q ss_pred CccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 728 RKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 728 R~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
.+|+.++|+++++.|+++++ ||. ++..+|++.|+.
T Consensus 131 ~~e~~~~~~~l~~~G~~~vi--G~~--~~~~~A~~~gl~ 165 (526)
T TIGR02329 131 EEDARSCVNDLRARGIGAVV--GAG--LITDLAEQAGLH 165 (526)
T ss_pred HHHHHHHHHHHHHCCCCEEE--CCh--HHHHHHHHcCCc
Confidence 57899999999999999988 887 667899999984
No 203
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=31.16 E-value=49 Score=35.16 Aligned_cols=44 Identities=9% Similarity=0.114 Sum_probs=39.6
Q ss_pred CCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCC
Q psy886 725 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTE 768 (962)
Q Consensus 725 D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~ 768 (962)
.+..|+..++++++++.||.++..||=.......+.+++++..+
T Consensus 20 ~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p 63 (249)
T TIGR01485 20 NQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTP 63 (249)
T ss_pred hHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCC
Confidence 45678999999999999999999999999999999999987644
No 204
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=31.02 E-value=66 Score=39.19 Aligned_cols=39 Identities=5% Similarity=0.189 Sum_probs=35.7
Q ss_pred CccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 728 RKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 728 R~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
-+.+.++|++|+++||.+++.||-...-+..+++++|+.
T Consensus 435 ~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 435 YSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred CHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 356799999999999999999999999999999999973
No 205
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=30.14 E-value=87 Score=30.86 Aligned_cols=40 Identities=13% Similarity=0.091 Sum_probs=36.9
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
..||++.+.++.|++. ..+++.|--.+..|..|.+.++..
T Consensus 42 ~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~ 81 (162)
T TIGR02251 42 FKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRG 81 (162)
T ss_pred EECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcC
Confidence 4799999999999988 999999999999999999998853
No 206
>KOG4383|consensus
Probab=30.00 E-value=26 Score=41.34 Aligned_cols=37 Identities=19% Similarity=0.284 Sum_probs=33.3
Q ss_pred eeeCCccceeeecccccCCCCEEEeCCCCeecceEEEEe
Q psy886 252 VIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIK 290 (962)
Q Consensus 252 ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~ 290 (962)
..|||. ..++|..-||.||||-+++|+.-||.++=++
T Consensus 160 afRDGh--lm~lP~~LLVeGDiIa~RPGQeafan~~g~~ 196 (1354)
T KOG4383|consen 160 AFRDGH--LMELPRILLVEGDIIAFRPGQEAFANCEGFD 196 (1354)
T ss_pred HhccCe--eeecceeEEEeccEEEecCCccccccccccC
Confidence 468997 7999999999999999999999999887664
No 207
>COG2013 Uncharacterized conserved protein [Function unknown]
Probab=29.19 E-value=1.5e+02 Score=31.17 Aligned_cols=49 Identities=24% Similarity=0.312 Sum_probs=32.9
Q ss_pred CCCCCCEEEEcCCCccCCCceEE-eeecc---ee-eeecccccCCCcceeecCCC
Q psy886 153 EIVPGDIVEVSVGDKIPADIRLI-KIYST---TI-RIDQSILTGESVSVIKHTDA 202 (962)
Q Consensus 153 ~l~~GDiv~v~~G~~iP~Dg~v~-~G~~~---~~-~vdes~lTGEs~Pv~k~~g~ 202 (962)
+|.+|..|.+++|..+--|+-|- +++.. -. .+-. ++||||.++.|..+.
T Consensus 22 eL~~ge~V~~e~Gam~~~~~~v~~~~~~~~gGl~~a~~r-~l~GEs~F~~~~~~~ 75 (227)
T COG2013 22 ELSPGESVYAEAGAMVYMDGDVEVKTKMGFGGLLGALKR-ALGGESLFLTKFEGR 75 (227)
T ss_pred EeCCCcEEEEecCeEEEccCCEEEEEEecCCcHHHHHHH-HhcCCceEEEEEecC
Confidence 57789999999999888887665 11110 00 0112 689999999997653
No 208
>PRK03818 putative transporter; Validated
Probab=28.58 E-value=1.2e+02 Score=36.60 Aligned_cols=14 Identities=21% Similarity=0.323 Sum_probs=10.0
Q ss_pred eCCCCCCCCEEEEc
Q psy886 150 RAKEIVPGDIVEVS 163 (962)
Q Consensus 150 ~~~~l~~GDiv~v~ 163 (962)
+...|++||++.|.
T Consensus 248 ~~~~L~~GDiLlV~ 261 (552)
T PRK03818 248 PDTIIQLGDLLHLV 261 (552)
T ss_pred CCCccCCCCEEEEE
Confidence 34468888888884
No 209
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=28.54 E-value=92 Score=30.98 Aligned_cols=42 Identities=19% Similarity=0.263 Sum_probs=36.7
Q ss_pred CCCCccHHHHHHHHHHcCC--EEEEEcCC-------CHHHHHHHHHHcCCC
Q psy886 725 DPPRKEVFDSIARCRAAGI--RVIVITGD-------NKATAEAICRRIGVF 766 (962)
Q Consensus 725 D~lR~~v~eaI~~l~~AGI--~v~MiTGD-------~~~TA~~IA~~~GI~ 766 (962)
+.+.|+..+.+++|++.+. +|+++|-- +.+.|.++++.+||.
T Consensus 58 ~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp 108 (168)
T PF09419_consen 58 DEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIP 108 (168)
T ss_pred CcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCc
Confidence 5678999999999999987 59999875 488899999999984
No 210
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=27.95 E-value=62 Score=34.89 Aligned_cols=39 Identities=8% Similarity=0.158 Sum_probs=33.3
Q ss_pred CCCccHHHHHHHHHH-cCCEEEEEcCCCHHHHHHHHHHcC
Q psy886 726 PPRKEVFDSIARCRA-AGIRVIVITGDNKATAEAICRRIG 764 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~-AGI~v~MiTGD~~~TA~~IA~~~G 764 (962)
.+-++..++|++|++ .|++++++||-....+..+.+.++
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~ 75 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYR 75 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCccc
Confidence 345789999999998 899999999999999888776554
No 211
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=27.73 E-value=1.1e+02 Score=33.01 Aligned_cols=44 Identities=16% Similarity=0.302 Sum_probs=34.2
Q ss_pred cCCCCccHHHHHHHHHHcCCEEEEEcCCC---HHHHHHHHHHcCCCC
Q psy886 724 LDPPRKEVFDSIARCRAAGIRVIVITGDN---KATAEAICRRIGVFT 767 (962)
Q Consensus 724 ~D~lR~~v~eaI~~l~~AGI~v~MiTGD~---~~TA~~IA~~~GI~~ 767 (962)
..++-|++.+.++.+++.|+++.++|+=. .+.....-++.|+..
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~ 162 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQ 162 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCC
Confidence 34678999999999999999999999955 333345556688853
No 212
>PF01455 HupF_HypC: HupF/HypC family; InterPro: IPR001109 The large subunit of [NiFe]-hydrogenase, as well as other nickel metalloenzymes, is synthesised as a precursor devoid of the metalloenzyme active site. This precursor then undergoes a complex post-translational maturation process that requires a number of accessory proteins. The hydrogenase expression/formation proteins (HupF/HypC) form a family of small proteins that are hydrogenase precursor-specific chaperones required for this maturation process []. They are believed to keep the hydrogenase precursor in a conformation accessible for metal incorporation [, ].; PDB: 3D3R_A 2Z1C_C 2OT2_A.
Probab=27.71 E-value=1.2e+02 Score=25.25 Aligned_cols=32 Identities=28% Similarity=0.242 Sum_probs=22.9
Q ss_pred CCeEEEEECCCccEEEEeC---CCCCCCCEEEEcCCC
Q psy886 133 PEMGKVIRGDKSGVQKVRA---KEIVPGDIVEVSVGD 166 (962)
Q Consensus 133 ~~~~~v~r~~~~~~~~i~~---~~l~~GDiv~v~~G~ 166 (962)
...+++-.+|. .++++. .+++|||.|++..|.
T Consensus 16 ~~~A~v~~~G~--~~~V~~~lv~~v~~Gd~VLVHaG~ 50 (68)
T PF01455_consen 16 GGMAVVDFGGV--RREVSLALVPDVKVGDYVLVHAGF 50 (68)
T ss_dssp TTEEEEEETTE--EEEEEGTTCTSB-TT-EEEEETTE
T ss_pred CCEEEEEcCCc--EEEEEEEEeCCCCCCCEEEEecCh
Confidence 45778878877 567765 368899999999984
No 213
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=27.69 E-value=72 Score=32.47 Aligned_cols=32 Identities=28% Similarity=0.466 Sum_probs=27.9
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHH
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAE 757 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~ 757 (962)
++.|++.++++.|++.|+++.++|.=......
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~ 115 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTT 115 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHH
Confidence 47999999999999999999999997765543
No 214
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=27.35 E-value=59 Score=30.22 Aligned_cols=27 Identities=22% Similarity=0.493 Sum_probs=23.4
Q ss_pred CccHHHHHHHHHHcCCEEEEEcCCCHH
Q psy886 728 RKEVFDSIARCRAAGIRVIVITGDNKA 754 (962)
Q Consensus 728 R~~v~eaI~~l~~AGI~v~MiTGD~~~ 754 (962)
-+++.++++.+|+.|++|+.||+++..
T Consensus 60 t~~~~~~~~~a~~~g~~vi~iT~~~~s 86 (128)
T cd05014 60 TDELLNLLPHLKRRGAPIIAITGNPNS 86 (128)
T ss_pred CHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 467899999999999999999996543
No 215
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=26.86 E-value=96 Score=32.32 Aligned_cols=43 Identities=23% Similarity=0.407 Sum_probs=39.6
Q ss_pred CCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCC
Q psy886 725 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFT 767 (962)
Q Consensus 725 D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~ 767 (962)
.++.||+.+.++.|++.|+.+.+.|+=....+..+-+..|+..
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~ 127 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLD 127 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChh
Confidence 3689999999999999999999999999999999999999864
No 216
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=26.66 E-value=79 Score=35.11 Aligned_cols=41 Identities=17% Similarity=0.282 Sum_probs=37.2
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH----cCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRR----IGVF 766 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~----~GI~ 766 (962)
++.+++.++++.|++.||++.++|.=+...|..+-++ +|+.
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~ 75 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQA 75 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcH
Confidence 4589999999999999999999999999999999888 7764
No 217
>TIGR03802 Asp_Ala_antiprt aspartate-alanine antiporter. All members of the seed alignment for this model are asparate-alanine anti-transporters (AspT) encoded next to the gene for aspartate 4-decarboxylase (AspD), which converts asparate to alanine, releasing CO2. The exchange of Asp for Ala is electrogenic, so the AspD/AspT system confers a proton-motive force. This transporter contains two copies of the AspT/YidE/YbjL antiporter duplication domain (TIGR01625).
Probab=25.23 E-value=1.5e+02 Score=35.78 Aligned_cols=26 Identities=23% Similarity=0.428 Sum_probs=15.8
Q ss_pred ceeeeCCccceeeecccccCCCCEEEe
Q psy886 250 GKVIRGDKSGVQKVRAKEIVPGDIVEV 276 (962)
Q Consensus 250 a~ViR~g~~~~~~I~~~~Lv~GDIV~l 276 (962)
..+.|+|+. ....+-..|..||++.+
T Consensus 337 l~I~R~g~~-i~~~~d~~L~~GD~LlV 362 (562)
T TIGR03802 337 EKIKRDDQP-LPILPETVLQRGDVVTL 362 (562)
T ss_pred EEEeeCCcc-ccCCCCCEecCCCEEEE
Confidence 356677764 34455556777777765
No 218
>PRK05933 type III secretion system protein; Validated
Probab=24.13 E-value=2.3e+02 Score=31.04 Aligned_cols=27 Identities=15% Similarity=0.230 Sum_probs=18.4
Q ss_pred eeecccccCCCCEEEeCCCCeecceEE
Q psy886 261 QKVRAKEIVPGDIVEVSVGDKIPADIR 287 (962)
Q Consensus 261 ~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ 287 (962)
.++-...+.++|+..+.+|..|..|..
T Consensus 312 VELGRT~l~IkELL~L~~GSVIeLDk~ 338 (372)
T PRK05933 312 AEVARYSLSVGEFLKLGPGSILQFDGV 338 (372)
T ss_pred EEEccccccHHHHhccCCCCEEEeCCc
Confidence 345556677777788888877777643
No 219
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=23.27 E-value=1.6e+02 Score=25.15 Aligned_cols=46 Identities=15% Similarity=0.111 Sum_probs=35.5
Q ss_pred ecccCCCCccHHHHHHHHHHcCCEEEE-EcCCCHHHHHHHHHHcCCC
Q psy886 721 VGMLDPPRKEVFDSIARCRAAGIRVIV-ITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 721 ~~i~D~lR~~v~eaI~~l~~AGI~v~M-iTGD~~~TA~~IA~~~GI~ 766 (962)
+.+.+..++.+.+..+.||++|++|.+ ..+.+..--..-|.+.|+.
T Consensus 7 i~~~~~~~~~a~~~~~~Lr~~g~~v~~d~~~~~~~~~~~~a~~~g~~ 53 (91)
T cd00860 7 IPVTDEHLDYAKEVAKKLSDAGIRVEVDLRNEKLGKKIREAQLQKIP 53 (91)
T ss_pred EeeCchHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHcCCC
Confidence 344566788889999999999999988 5666666677778888863
No 220
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=22.77 E-value=73 Score=31.33 Aligned_cols=23 Identities=13% Similarity=0.377 Sum_probs=20.3
Q ss_pred CccHHHHHHHHHHcCCEEEEEcC
Q psy886 728 RKEVFDSIARCRAAGIRVIVITG 750 (962)
Q Consensus 728 R~~v~eaI~~l~~AGI~v~MiTG 750 (962)
-++|+++++++++.|.+++|+|-
T Consensus 31 ~~~v~~~L~~l~~~Gy~IvIvTN 53 (159)
T PF08645_consen 31 PPGVPEALRELHKKGYKIVIVTN 53 (159)
T ss_dssp -TTHHHHHHHHHHTTEEEEEEEE
T ss_pred chhHHHHHHHHHhcCCeEEEEeC
Confidence 45799999999999999999983
No 221
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=22.69 E-value=82 Score=31.70 Aligned_cols=24 Identities=21% Similarity=0.365 Sum_probs=22.0
Q ss_pred CCccHHHHHHHHHHcCCEEEEEcC
Q psy886 727 PRKEVFDSIARCRAAGIRVIVITG 750 (962)
Q Consensus 727 lR~~v~eaI~~l~~AGI~v~MiTG 750 (962)
+.+++.+++..++++|.+++|+|-
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTN 55 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTN 55 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEEC
Confidence 478999999999999999999974
No 222
>COG1663 LpxK Tetraacyldisaccharide-1-P 4'-kinase [Cell envelope biogenesis, outer membrane]
Probab=22.60 E-value=71 Score=35.29 Aligned_cols=78 Identities=14% Similarity=0.201 Sum_probs=44.4
Q ss_pred ccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCccccCCC---C---CcCcEEEecc--ChhHHHHh---hc
Q psy886 729 KEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKS---Y---SKAEIGIAMG--SGTAVAKS---AS 797 (962)
Q Consensus 729 ~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~~~~~~g~~---l---~~AdVGIAmg--~gtdvAke---aA 797 (962)
|=|..-++.|++.|+++.++|-...-.....-.-..+.. ...-.|.| + ..+-|.|+-- .+-..+.+ .+
T Consensus 64 P~vi~la~~l~~rG~~~gvvSRGYgg~~~~~~~~~~~~~-~a~~~GDEPlLlA~~t~~pv~v~~~R~~~~~~l~~~~~~~ 142 (336)
T COG1663 64 PVVIWLAEALQARGVRVGVVSRGYGGKLKVVPLVDNIHT-TAAEVGDEPLLLARRTGAPVAVSPDRKDAAKALLAAHLGC 142 (336)
T ss_pred HHHHHHHHHHHhcCCeeEEEecCcCCCCccccccccCcC-ChHHcCchHHHHhhhcCCcEEEehhHHHHHHHHHhhCCCC
Confidence 446788999999999999998665431111100000000 00011211 1 2566666665 35555555 58
Q ss_pred ccccccCChh
Q psy886 798 EMVLADDNFS 807 (962)
Q Consensus 798 DivL~dd~f~ 807 (962)
|+|++||.|.
T Consensus 143 diIi~DDG~Q 152 (336)
T COG1663 143 DIIVLDDGLQ 152 (336)
T ss_pred CEEEEcCcch
Confidence 9999999987
No 223
>PRK05585 yajC preprotein translocase subunit YajC; Validated
Probab=22.34 E-value=3.7e+02 Score=24.46 Aligned_cols=28 Identities=4% Similarity=0.041 Sum_probs=12.4
Q ss_pred HHHHHHHHHHHHHhccCCCeEEEEECCC
Q psy886 116 WQERNAESAIEALKEYEPEMGKVIRGDK 143 (962)
Q Consensus 116 ~~~~~~~~~l~~l~~~~~~~~~v~r~~~ 143 (962)
..++|.++..+++.+-...--+|+--|+
T Consensus 37 RpqkK~~k~~~~~~~~Lk~Gd~VvT~gG 64 (106)
T PRK05585 37 RPQQKRQKEHKKMLSSLAKGDEVVTNGG 64 (106)
T ss_pred cHHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 3444444444555443333344544443
No 224
>COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis]
Probab=21.62 E-value=85 Score=28.10 Aligned_cols=33 Identities=30% Similarity=0.439 Sum_probs=25.6
Q ss_pred CccceeeeCCccceeeecccccCCCCEEEeCCCCee
Q psy886 247 PEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKI 282 (962)
Q Consensus 247 ~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~v 282 (962)
-..-+|.-+|. .--++.++++||+|.|.-|...
T Consensus 31 ~~~GrV~vNG~---~aKpS~~VK~GD~l~i~~~~~~ 63 (100)
T COG1188 31 IEGGRVKVNGQ---RAKPSKEVKVGDILTIRFGNKE 63 (100)
T ss_pred HHCCeEEECCE---EcccccccCCCCEEEEEeCCcE
Confidence 34557777775 4579999999999999887654
No 225
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=21.51 E-value=1.5e+02 Score=29.48 Aligned_cols=40 Identities=13% Similarity=0.209 Sum_probs=31.7
Q ss_pred CCccHHHHHHHHHHcCCEEEEEc-CCCHHHHHHHHHHcCCC
Q psy886 727 PRKEVFDSIARCRAAGIRVIVIT-GDNKATAEAICRRIGVF 766 (962)
Q Consensus 727 lR~~v~eaI~~l~~AGI~v~MiT-GD~~~TA~~IA~~~GI~ 766 (962)
+-|+|+++++.|++.|+++.+-| =|.++-|+.+=+.++|.
T Consensus 46 lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~ 86 (169)
T PF12689_consen 46 LYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEID 86 (169)
T ss_dssp --TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C
T ss_pred eCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCC
Confidence 57999999999999999999999 48899999999999987
No 226
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.
Probab=21.25 E-value=2.2e+02 Score=22.73 Aligned_cols=22 Identities=9% Similarity=0.054 Sum_probs=16.4
Q ss_pred HHHhhhhhhccCccccCCCChh
Q psy886 41 RLRLRQIDFIPARVTSLSPSEN 62 (962)
Q Consensus 41 ~~~~~~~~~g~~~~~~~~~~~~ 62 (962)
.+-.+...||+|.+..+.....
T Consensus 15 ~v~~r~~~~G~N~l~~~~~~s~ 36 (64)
T smart00831 15 EAARRLERYGPNELPPPKKRSP 36 (64)
T ss_pred HHHHHHHHhCCCCCCCCCCCCH
Confidence 4667888899999987764433
No 227
>PF05240 APOBEC_C: APOBEC-like C-terminal domain; InterPro: IPR007904 This domain is found at the C terminus of the Apolipoprotein B mRNA editing enzyme. Apobec-1 catalyzes C to U editing of apolipoprotein B (apoB) mRNA in the mammalian intestine. C to U RNA editing of mammalian apolipoprotein B (apoB) RNA is a site-specific posttranscriptional modification in which a single cytidine is enzymatically deaminated to uridine, thereby generating a UAA stop codon in the edited mRNA. The function of this domain is currently unknown.; GO: 0008270 zinc ion binding, 0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines; PDB: 2NYT_D.
Probab=20.79 E-value=1e+02 Score=24.37 Aligned_cols=23 Identities=22% Similarity=0.297 Sum_probs=17.0
Q ss_pred ccHHHHHHHHHHcCCEEEEEcCC
Q psy886 729 KEVFDSIARCRAAGIRVIVITGD 751 (962)
Q Consensus 729 ~~v~eaI~~l~~AGI~v~MiTGD 751 (962)
++-++.+..|.+||++|-|.|-+
T Consensus 2 ~~~qegLr~L~~aG~~v~iM~~~ 24 (55)
T PF05240_consen 2 PDYQEGLRRLCQAGAQVSIMTYS 24 (55)
T ss_dssp HHHHHHHHHHHHTT-EEEE--HH
T ss_pred cHHHHHHHHHHHCCCeEEecCcH
Confidence 55678999999999999998754
No 228
>PRK08433 flagellar motor switch protein; Validated
Probab=20.15 E-value=51 Score=30.22 Aligned_cols=11 Identities=9% Similarity=0.537 Sum_probs=5.9
Q ss_pred CCCCCCEEEEc
Q psy886 153 EIVPGDIVEVS 163 (962)
Q Consensus 153 ~l~~GDiv~v~ 163 (962)
++++||+|.+.
T Consensus 52 ~Lq~GDVI~Ld 62 (111)
T PRK08433 52 KFEKGSVIDLE 62 (111)
T ss_pred CCCCCCEEEeC
Confidence 44555555553
No 229
>cd05008 SIS_GlmS_GlmD_1 SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) cont
Probab=20.15 E-value=89 Score=28.92 Aligned_cols=26 Identities=12% Similarity=0.259 Sum_probs=22.8
Q ss_pred CccHHHHHHHHHHcCCEEEEEcCCCH
Q psy886 728 RKEVFDSIARCRAAGIRVIVITGDNK 753 (962)
Q Consensus 728 R~~v~eaI~~l~~AGI~v~MiTGD~~ 753 (962)
-+++.++++.+|+.|.+|+.+|+...
T Consensus 59 t~e~~~~~~~a~~~g~~vi~iT~~~~ 84 (126)
T cd05008 59 TADTLAALRLAKEKGAKTVAITNVVG 84 (126)
T ss_pred CHHHHHHHHHHHHcCCeEEEEECCCC
Confidence 45789999999999999999999754
No 230
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=20.15 E-value=1.1e+02 Score=32.24 Aligned_cols=42 Identities=21% Similarity=0.332 Sum_probs=30.6
Q ss_pred cCCCCccHHHHHHHHHHcCCEEEEEc---CCCHHHHH-HHHHHcCC
Q psy886 724 LDPPRKEVFDSIARCRAAGIRVIVIT---GDNKATAE-AICRRIGV 765 (962)
Q Consensus 724 ~D~lR~~v~eaI~~l~~AGI~v~MiT---GD~~~TA~-~IA~~~GI 765 (962)
.+.+=+++.++|+.++++|++++++| |-.+.... .+.+..|+
T Consensus 12 ~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~ 57 (236)
T TIGR01460 12 GHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGV 57 (236)
T ss_pred CCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCC
Confidence 45566799999999999999999999 54444433 34333676
Done!