BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8862
(265 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9HWF5|SECY_PSEAE Protein translocase subunit SecY OS=Pseudomonas aeruginosa (strain
ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=secY
PE=3 SV=1
Length = 442
Score = 193 bits (490), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 132/190 (69%), Gaps = 12/190 (6%)
Query: 28 GAHIPIPSINYSQLTKLFEKNQNNILGMFNMFSGGALSRLTIFSLGIMPYISSSIIMQLL 87
GAHIP+P IN +L LF +N+ IL +FNMFSGGAL R++IF+LGIMPYIS+SIIMQL+
Sbjct: 35 GAHIPVPGINPDRLAALFRQNEGTILSLFNMFSGGALERMSIFALGIMPYISASIIMQLM 94
Query: 88 SSIMPKFENLKKEGELGKYKIAQYIRFSTLILAILQGSGISLILKSQKNLVLDTSFYFHF 147
++I P+ E LKKEGE G+ KI+QY R+ T++LA++Q G+S+ L SQ + F F+F
Sbjct: 95 TAISPQLEQLKKEGESGRRKISQYTRYGTVVLALVQAIGMSVGLGSQ-GVAFSNDFGFYF 153
Query: 148 TTVLTLVSGTIFLMWLSEQITEYGLGNGTSIIICSGIISSFPNIL-----------INLL 196
V T V+G +F+MWL EQITE G+GNG S++I +GI++ P + IN+
Sbjct: 154 VAVTTFVAGAMFMMWLGEQITERGVGNGISMLIFAGIVAGLPRAIGQSFESARQGDINIF 213
Query: 197 KLVKIDLVNI 206
L+ + L+ +
Sbjct: 214 ALIGVGLLAV 223
>sp|Q4UMQ9|SECY_RICFE Protein translocase subunit SecY OS=Rickettsia felis (strain ATCC
VR-1525 / URRWXCal2) GN=secY PE=3 SV=1
Length = 433
Score = 175 bits (443), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 91/177 (51%), Positives = 127/177 (71%), Gaps = 4/177 (2%)
Query: 28 GAHIPIPSINYSQLTKLFEKNQNNILGMFNMFSGGALSRLTIFSLGIMPYISSSIIMQLL 87
G+ IPIP I+ L+ + EKNQ+ ILGMFNM SGG+L R++IF+L IMPYI++SII+QL+
Sbjct: 30 GSFIPIPGIDSIALSSVAEKNQSGILGMFNMLSGGSLGRMSIFALAIMPYITASIIIQLM 89
Query: 88 SSIMPKFENLKKEGELGKYKIAQYIRFSTLILAILQGSGISLILKS----QKNLVLDTSF 143
S ENLKKEGE+GK K+ Q R+ T++LA Q G+++ L+S +V+ F
Sbjct: 90 SVAYKPLENLKKEGEVGKRKVNQLSRYLTVLLASFQAYGVAISLESIVTNTGPVVILAGF 149
Query: 144 YFHFTTVLTLVSGTIFLMWLSEQITEYGLGNGTSIIICSGIISSFPNILINLLKLVK 200
+F TTV+TLV GT+ LMWL EQIT+ G+GNGTS+II GIIS P+ +I++ +L +
Sbjct: 150 FFRVTTVITLVVGTMLLMWLGEQITQRGIGNGTSLIIFIGIISGVPSAIISMFELSR 206
>sp|Q9ZCS5|SECY_RICPR Protein translocase subunit SecY OS=Rickettsia prowazekii (strain
Madrid E) GN=secY PE=3 SV=1
Length = 433
Score = 174 bits (442), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 94/177 (53%), Positives = 124/177 (70%), Gaps = 4/177 (2%)
Query: 28 GAHIPIPSINYSQLTKLFEKNQNNILGMFNMFSGGALSRLTIFSLGIMPYISSSIIMQLL 87
G+ IPIP I+ L + EKNQ ILGMFNM SGG+L R++IF+L IMPYI++SII+QL+
Sbjct: 30 GSFIPIPGIDSIALNSVAEKNQFGILGMFNMLSGGSLGRMSIFALAIMPYITASIIIQLM 89
Query: 88 SSIMPKFENLKKEGELGKYKIAQYIRFSTLILAILQGSGISLILKSQKN----LVLDTSF 143
S ENLKKEGE GK KI Q R+ T++LA Q G++L L+S +V+ F
Sbjct: 90 SVAYKPLENLKKEGETGKRKINQLSRYLTVLLASFQAYGVALSLESMVTNTGPVVILAGF 149
Query: 144 YFHFTTVLTLVSGTIFLMWLSEQITEYGLGNGTSIIICSGIISSFPNILINLLKLVK 200
+F TTV+TLV GTI LMWL EQIT+ G+GNGTS+II GIIS P+ +I++ +L +
Sbjct: 150 FFRVTTVITLVVGTILLMWLGEQITQRGIGNGTSLIIFIGIISGVPSAIISMFELSR 206
>sp|P43804|SECY_HAEIN Protein translocase subunit SecY OS=Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd) GN=secY PE=3 SV=1
Length = 441
Score = 174 bits (442), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 82/174 (47%), Positives = 125/174 (71%), Gaps = 1/174 (0%)
Query: 28 GAHIPIPSINYSQLTKLFEKNQNNILGMFNMFSGGALSRLTIFSLGIMPYISSSIIMQLL 87
G+ IP+P I+ + L +L E+ + I+ MFNMFSGGALSR +I +LGIMPYIS+SI++QLL
Sbjct: 36 GSFIPVPGIDAAVLAQLVEQQKGTIIDMFNMFSGGALSRASILALGIMPYISASIVIQLL 95
Query: 88 SSIMPKFENLKKEGELGKYKIAQYIRFSTLILAILQGSGISLILKSQ-KNLVLDTSFYFH 146
+++ P LKKEG G+ KI++Y R++T++ A +Q IS L + LV + F F+
Sbjct: 96 ATVSPALAELKKEGAAGQRKISKYTRYATVVFATIQAVAISTGLPNMLSGLVPNVGFSFY 155
Query: 147 FTTVLTLVSGTIFLMWLSEQITEYGLGNGTSIIICSGIISSFPNILINLLKLVK 200
FT+V++LV+GT+FLMWL EQITE G+GNG SI++ GI++ P+ ++ ++ +
Sbjct: 156 FTSVVSLVTGTMFLMWLGEQITERGIGNGISILVFGGIVAGLPSAILQTIEQAR 209
>sp|Q68W98|SECY_RICTY Protein translocase subunit SecY OS=Rickettsia typhi (strain ATCC
VR-144 / Wilmington) GN=secY PE=3 SV=1
Length = 433
Score = 172 bits (437), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 124/177 (70%), Gaps = 4/177 (2%)
Query: 28 GAHIPIPSINYSQLTKLFEKNQNNILGMFNMFSGGALSRLTIFSLGIMPYISSSIIMQLL 87
G+ IPIP I+ L + EKNQ ILGMFNM SGG+L R++IF+L IMPYI++SII+QL+
Sbjct: 30 GSFIPIPGIDSIALNSVAEKNQFGILGMFNMLSGGSLGRMSIFALAIMPYITASIIIQLM 89
Query: 88 SSIMPKFENLKKEGELGKYKIAQYIRFSTLILAILQGSGISLILKSQKN----LVLDTSF 143
S ENLKKEGE GK KI Q R+ T++LA Q G++L L+S +V+ F
Sbjct: 90 SVAYKPLENLKKEGESGKRKINQLSRYLTVLLASFQAYGVALSLESMVTNTGPVVILAGF 149
Query: 144 YFHFTTVLTLVSGTIFLMWLSEQITEYGLGNGTSIIICSGIISSFPNILINLLKLVK 200
+F TTV+TLV GT+ LMWL EQIT+ G+GNGTS+II GIIS P+ +I++ +L +
Sbjct: 150 FFRVTTVITLVVGTMLLMWLGEQITQRGIGNGTSLIIFIGIISGVPSAIISMFELSR 206
>sp|Q92GY6|SECY_RICCN Protein translocase subunit SecY OS=Rickettsia conorii (strain ATCC
VR-613 / Malish 7) GN=secY PE=3 SV=1
Length = 433
Score = 171 bits (434), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 89/177 (50%), Positives = 126/177 (71%), Gaps = 4/177 (2%)
Query: 28 GAHIPIPSINYSQLTKLFEKNQNNILGMFNMFSGGALSRLTIFSLGIMPYISSSIIMQLL 87
G+ IPIP I+ L+ + +NQ+ ILGMFNM SGG+L R++IF+L IMPYI++SII+QL+
Sbjct: 30 GSFIPIPGIDSIALSSVAAQNQSGILGMFNMLSGGSLGRMSIFALAIMPYITASIIIQLM 89
Query: 88 SSIMPKFENLKKEGELGKYKIAQYIRFSTLILAILQGSGISLILKS----QKNLVLDTSF 143
S ENLKKEGE+GK K+ Q R+ T++LA Q G+++ L+S +V+ F
Sbjct: 90 SVAYKPLENLKKEGEVGKRKVNQLSRYLTVLLASFQAYGVAISLESIVTNTGPVVILAGF 149
Query: 144 YFHFTTVLTLVSGTIFLMWLSEQITEYGLGNGTSIIICSGIISSFPNILINLLKLVK 200
+F TTV+TLV GT+ LMWL EQIT+ G+GNGTS+II GIIS P+ +I++ +L +
Sbjct: 150 FFRITTVITLVVGTMLLMWLGEQITQRGIGNGTSLIIFIGIISGVPSAIISMFELSR 206
>sp|P78283|SECY_VIBCH Protein translocase subunit SecY OS=Vibrio cholerae serotype O1
(strain ATCC 39315 / El Tor Inaba N16961) GN=secY PE=3
SV=2
Length = 444
Score = 171 bits (433), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 85/166 (51%), Positives = 119/166 (71%), Gaps = 3/166 (1%)
Query: 27 SGAHIPIPSINYSQLTKLFEKNQNNILGMFNMFSGGALSRLTIFSLGIMPYISSSIIMQL 86
+G+ +PIP I+ + L +LFE+ + I+ MFNMFSGGAL R +I +LGIMPYIS+SI++QL
Sbjct: 35 AGSFVPIPGIDAAVLAELFEQQKGTIVEMFNMFSGGALERASILALGIMPYISASIVVQL 94
Query: 87 LSSIMPKFENLKKEGELGKYKIAQYIRFSTLILAILQGSGISLILKSQKN--LVLDTSFY 144
L+ + P LKKEGE G+ KI+QY R+ TL+LA Q GI+ L + N +V+D + +
Sbjct: 95 LTVVHPALAELKKEGEAGRRKISQYTRYGTLVLATFQAIGIATGLPNMVNNLVVIDQTMF 154
Query: 145 FHFTTVLTLVSGTIFLMWLSEQITEYGLGNGTSIIICSGIISSFPN 190
TV +LV+GT+FLMWL EQITE G+GNG SI+I +GI++ P
Sbjct: 155 TLIATV-SLVTGTMFLMWLGEQITERGIGNGISILIFAGIVAGLPK 199
>sp|Q1RHP1|SECY_RICBR Protein translocase subunit SecY OS=Rickettsia bellii (strain
RML369-C) GN=secY PE=3 SV=1
Length = 433
Score = 168 bits (426), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 91/177 (51%), Positives = 124/177 (70%), Gaps = 4/177 (2%)
Query: 28 GAHIPIPSINYSQLTKLFEKNQNNILGMFNMFSGGALSRLTIFSLGIMPYISSSIIMQLL 87
G+ IPI I+ L + EKNQ+ ILGMFNM SGG+L R++IF+L IMPYI++SII+QL+
Sbjct: 30 GSFIPIAGIDAIALGSIAEKNQSGILGMFNMLSGGSLGRMSIFALAIMPYITASIIIQLM 89
Query: 88 SSIMPKFENLKKEGELGKYKIAQYIRFSTLILAILQGSGISLILKS----QKNLVLDTSF 143
S ENLKKEGE GK KI Q R+ T++LA LQ G+++ L+S +V+
Sbjct: 90 SVAYKPLENLKKEGEAGKRKINQLSRYLTVLLASLQAYGVAVSLESIVTNTGPVVIIPGL 149
Query: 144 YFHFTTVLTLVSGTIFLMWLSEQITEYGLGNGTSIIICSGIISSFPNILINLLKLVK 200
+F TTV+TLV GT+ LMWL EQIT+ G+GNGTS+II GIIS P+ +I++ +L +
Sbjct: 150 FFKITTVITLVVGTMLLMWLGEQITQRGIGNGTSLIIFIGIISGVPSAIISMFELSR 206
>sp|P49976|SECY_BUCAK Protein translocase subunit SecY (Fragment) OS=Buchnera aphidicola
subsp. Acyrthosiphon kondoi GN=secY PE=3 SV=1
Length = 356
Score = 167 bits (423), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 92/176 (52%), Positives = 128/176 (72%), Gaps = 3/176 (1%)
Query: 28 GAHIPIPSINYSQLTKLFEKNQNNILGMFNMFSGGALSRLTIFSLGIMPYISSSIIMQLL 87
G+ IPIP I+ + L KL E+ + I+ MFNMFSGGALSR +IF+LGIMPYIS+SII+QLL
Sbjct: 36 GSFIPIPGIDATVLAKLLEQQRGTIIEMFNMFSGGALSRASIFALGIMPYISASIIIQLL 95
Query: 88 SSIMPKFENLKKEGELGKYKIAQYIRFSTLILAILQGSGISLILKS---QKNLVLDTSFY 144
+ + P +KKEGE G+ KI+QY R+ TL+LAI Q GI+ L + + LV++ F
Sbjct: 96 TVVHPALAEVKKEGEAGRRKISQYTRYGTLVLAIFQSIGIATGLPNMPGMQGLVMNPGFA 155
Query: 145 FHFTTVLTLVSGTIFLMWLSEQITEYGLGNGTSIIICSGIISSFPNILINLLKLVK 200
F+FT V++LV+GT+FLMWL EQITE G+GNG SIII +GI++ P + + ++ +
Sbjct: 156 FYFTAVVSLVTGTMFLMWLGEQITERGIGNGISIIIFAGIVAGLPPAVAHTIEQAR 211
>sp|P0AGA5|SECY_SHIFL Protein translocase subunit SecY OS=Shigella flexneri GN=secY PE=3
SV=1
Length = 443
Score = 166 bits (421), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 92/176 (52%), Positives = 128/176 (72%), Gaps = 3/176 (1%)
Query: 28 GAHIPIPSINYSQLTKLFEKNQNNILGMFNMFSGGALSRLTIFSLGIMPYISSSIIMQLL 87
G+ IPIP I+ + L KL E+ + I+ MFNMFSGGALSR +IF+LGIMPYIS+SII+QLL
Sbjct: 36 GSFIPIPGIDAAVLAKLLEQQRGTIIEMFNMFSGGALSRASIFALGIMPYISASIIIQLL 95
Query: 88 SSIMPKFENLKKEGELGKYKIAQYIRFSTLILAILQGSGISLILKS---QKNLVLDTSFY 144
+ + P +KKEGE G+ KI+QY R+ TL+LAI Q GI+ L + + LV++ F
Sbjct: 96 TVVHPTLAEIKKEGESGRRKISQYTRYGTLVLAIFQSIGIATGLPNMPGMQGLVINPGFA 155
Query: 145 FHFTTVLTLVSGTIFLMWLSEQITEYGLGNGTSIIICSGIISSFPNILINLLKLVK 200
F+FT V++LV+GT+FLMWL EQITE G+GNG SIII +GI++ P + + ++ +
Sbjct: 156 FYFTAVVSLVTGTMFLMWLGEQITERGIGNGISIIIFAGIVAGLPPAIAHTIEQAR 211
>sp|P0AGA2|SECY_ECOLI Protein translocase subunit SecY OS=Escherichia coli (strain K12)
GN=secY PE=1 SV=1
Length = 443
Score = 166 bits (421), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 92/176 (52%), Positives = 128/176 (72%), Gaps = 3/176 (1%)
Query: 28 GAHIPIPSINYSQLTKLFEKNQNNILGMFNMFSGGALSRLTIFSLGIMPYISSSIIMQLL 87
G+ IPIP I+ + L KL E+ + I+ MFNMFSGGALSR +IF+LGIMPYIS+SII+QLL
Sbjct: 36 GSFIPIPGIDAAVLAKLLEQQRGTIIEMFNMFSGGALSRASIFALGIMPYISASIIIQLL 95
Query: 88 SSIMPKFENLKKEGELGKYKIAQYIRFSTLILAILQGSGISLILKS---QKNLVLDTSFY 144
+ + P +KKEGE G+ KI+QY R+ TL+LAI Q GI+ L + + LV++ F
Sbjct: 96 TVVHPTLAEIKKEGESGRRKISQYTRYGTLVLAIFQSIGIATGLPNMPGMQGLVINPGFA 155
Query: 145 FHFTTVLTLVSGTIFLMWLSEQITEYGLGNGTSIIICSGIISSFPNILINLLKLVK 200
F+FT V++LV+GT+FLMWL EQITE G+GNG SIII +GI++ P + + ++ +
Sbjct: 156 FYFTAVVSLVTGTMFLMWLGEQITERGIGNGISIIIFAGIVAGLPPAIAHTIEQAR 211
>sp|P0AGA3|SECY_ECOL6 Protein translocase subunit SecY OS=Escherichia coli O6:H1 (strain
CFT073 / ATCC 700928 / UPEC) GN=secY PE=3 SV=1
Length = 443
Score = 166 bits (421), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 92/176 (52%), Positives = 128/176 (72%), Gaps = 3/176 (1%)
Query: 28 GAHIPIPSINYSQLTKLFEKNQNNILGMFNMFSGGALSRLTIFSLGIMPYISSSIIMQLL 87
G+ IPIP I+ + L KL E+ + I+ MFNMFSGGALSR +IF+LGIMPYIS+SII+QLL
Sbjct: 36 GSFIPIPGIDAAVLAKLLEQQRGTIIEMFNMFSGGALSRASIFALGIMPYISASIIIQLL 95
Query: 88 SSIMPKFENLKKEGELGKYKIAQYIRFSTLILAILQGSGISLILKS---QKNLVLDTSFY 144
+ + P +KKEGE G+ KI+QY R+ TL+LAI Q GI+ L + + LV++ F
Sbjct: 96 TVVHPTLAEIKKEGESGRRKISQYTRYGTLVLAIFQSIGIATGLPNMPGMQGLVINPGFA 155
Query: 145 FHFTTVLTLVSGTIFLMWLSEQITEYGLGNGTSIIICSGIISSFPNILINLLKLVK 200
F+FT V++LV+GT+FLMWL EQITE G+GNG SIII +GI++ P + + ++ +
Sbjct: 156 FYFTAVVSLVTGTMFLMWLGEQITERGIGNGISIIIFAGIVAGLPPAIAHTIEQAR 211
>sp|P0AGA4|SECY_ECO57 Protein translocase subunit SecY OS=Escherichia coli O157:H7
GN=secY PE=3 SV=1
Length = 443
Score = 166 bits (421), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 92/176 (52%), Positives = 128/176 (72%), Gaps = 3/176 (1%)
Query: 28 GAHIPIPSINYSQLTKLFEKNQNNILGMFNMFSGGALSRLTIFSLGIMPYISSSIIMQLL 87
G+ IPIP I+ + L KL E+ + I+ MFNMFSGGALSR +IF+LGIMPYIS+SII+QLL
Sbjct: 36 GSFIPIPGIDAAVLAKLLEQQRGTIIEMFNMFSGGALSRASIFALGIMPYISASIIIQLL 95
Query: 88 SSIMPKFENLKKEGELGKYKIAQYIRFSTLILAILQGSGISLILKS---QKNLVLDTSFY 144
+ + P +KKEGE G+ KI+QY R+ TL+LAI Q GI+ L + + LV++ F
Sbjct: 96 TVVHPTLAEIKKEGESGRRKISQYTRYGTLVLAIFQSIGIATGLPNMPGMQGLVINPGFA 155
Query: 145 FHFTTVLTLVSGTIFLMWLSEQITEYGLGNGTSIIICSGIISSFPNILINLLKLVK 200
F+FT V++LV+GT+FLMWL EQITE G+GNG SIII +GI++ P + + ++ +
Sbjct: 156 FYFTAVVSLVTGTMFLMWLGEQITERGIGNGISIIIFAGIVAGLPPAIAHTIEQAR 211
>sp|O66491|SECY_AQUAE Protein translocase subunit SecY OS=Aquifex aeolicus (strain VF5)
GN=secY PE=1 SV=1
Length = 429
Score = 161 bits (408), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 79/179 (44%), Positives = 125/179 (69%), Gaps = 6/179 (3%)
Query: 28 GAHIPIPSINYSQLTKLFEKNQNNILGMFNMFSGGALSRLTIFSLGIMPYISSSIIMQLL 87
G+HIPIP IN L + + ++ ++++FSGG L RLT+F+LG+MPYIS+SI+MQLL
Sbjct: 31 GSHIPIPGINPEALRDFLKAFEGSVFALYDIFSGGNLGRLTVFALGVMPYISASIMMQLL 90
Query: 88 SSIMPKFENL-KKEGELGKYKIAQYIRFSTLILAILQGSGISLILKSQKN-----LVLDT 141
+ +P + L K+EG+ G+YKI +Y ++ TL +A +Q GI+ ++ Q + +V +
Sbjct: 91 TVAIPSLQRLAKEEGDYGRYKINEYTKYLTLFVATVQSLGIAFWIRGQVSPKGIPVVENP 150
Query: 142 SFYFHFTTVLTLVSGTIFLMWLSEQITEYGLGNGTSIIICSGIISSFPNILINLLKLVK 200
F TVLTLV+GT+FL+W++++ITE G+GNG S+II +GI+++FPN +I + VK
Sbjct: 151 GISFILITVLTLVAGTMFLVWIADRITEKGIGNGASLIIFAGIVANFPNAVIQFYEKVK 209
>sp|Q59912|SECY_STRGB Protein translocase subunit SecY OS=Streptomyces galbus GN=secY
PE=3 SV=1
Length = 437
Score = 154 bits (390), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 79/181 (43%), Positives = 116/181 (64%), Gaps = 11/181 (6%)
Query: 28 GAHIPIPSINYSQLTKLFEKNQNN--ILGMFNMFSGGALSRLTIFSLGIMPYISSSIIMQ 85
G HIPIP ++Y + + + N + G+ NMFSGGAL ++TIF+LGIMPYI++SII+Q
Sbjct: 31 GTHIPIPGVDYKNVQQCVREASGNQGLFGLVNMFSGGALLQITIFALGIMPYITASIILQ 90
Query: 86 LLSSIMPKFENLKKEGELGKYKIAQYIRFSTLILAILQGSGISLILKSQK---------N 136
LL+ ++P+ E LKKEG+ G KI QY R+ T+ LAILQG+G+ +S
Sbjct: 91 LLTVVIPRLEALKKEGQAGTAKITQYTRYLTVALAILQGTGLVATARSAPLFGRCSVGGQ 150
Query: 137 LVLDTSFYFHFTTVLTLVSGTIFLMWLSEQITEYGLGNGTSIIICSGIISSFPNILINLL 196
+V D S + T V+ + +GT +MWL E IT+ G+GNG SI++ I ++FP+ L +
Sbjct: 151 IVPDQSIFTTITMVICMTAGTCVVMWLGELITDRGIGNGMSILMFISIAATFPSALWAIK 210
Query: 197 K 197
K
Sbjct: 211 K 211
>sp|P57571|SECY_BUCAI Protein translocase subunit SecY OS=Buchnera aphidicola subsp.
Acyrthosiphon pisum (strain APS) GN=secY PE=3 SV=1
Length = 437
Score = 154 bits (390), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 74/146 (50%), Positives = 109/146 (74%), Gaps = 3/146 (2%)
Query: 28 GAHIPIPSINYSQLTKLFEKNQNNILGMFNMFSGGALSRLTIFSLGIMPYISSSIIMQLL 87
G+ IPIP I+ + L+K+ I+ MFNMFSGGALSR +IF+LGIMPYIS+SII+QLL
Sbjct: 36 GSFIPIPGIDTTILSKILNNQNGTIVDMFNMFSGGALSRASIFALGIMPYISASIIIQLL 95
Query: 88 SSIMPKFENLKKEGELGKYKIAQYIRFSTLILAILQGSGISLILKS---QKNLVLDTSFY 144
+ + P +KKEGE G+++I QY R++TLILA++Q GI++ L + ++++++T FY
Sbjct: 96 TLVYPTLSEIKKEGESGRHRINQYTRYATLILALVQSIGIAMTLPNIAGIRSIIINTDFY 155
Query: 145 FHFTTVLTLVSGTIFLMWLSEQITEY 170
F+ +++LV+ T+FLMWL E ITEY
Sbjct: 156 FYLIAIISLVTSTMFLMWLGELITEY 181
>sp|Q8K969|SECY_BUCAP Protein translocase subunit SecY OS=Buchnera aphidicola subsp.
Schizaphis graminum (strain Sg) GN=secY PE=3 SV=1
Length = 439
Score = 153 bits (386), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/145 (51%), Positives = 104/145 (71%), Gaps = 3/145 (2%)
Query: 28 GAHIPIPSINYSQLTKLFEKNQNNILGMFNMFSGGALSRLTIFSLGIMPYISSSIIMQLL 87
G+ IPIP I+ + L+++ + I+ MFNMFSGGALSR +IF+LGIMPYISSSII+QLL
Sbjct: 36 GSFIPIPGIDTTILSRILNDQKGTIIEMFNMFSGGALSRASIFALGIMPYISSSIIIQLL 95
Query: 88 SSIMPKFENLKKEGELGKYKIAQYIRFSTLILAILQGSGISLIL---KSQKNLVLDTSFY 144
+ ++P +KKEGE+G+ KI QY R++TL+LA+ Q GI L +++ FY
Sbjct: 96 TLVIPSLSEIKKEGEVGRTKINQYTRYTTLVLALFQSIGIVTSLPKISGMNQIIIHPDFY 155
Query: 145 FHFTTVLTLVSGTIFLMWLSEQITE 169
F+FT ++ LV+GT+FLMWL E ITE
Sbjct: 156 FYFTAIIILVTGTMFLMWLGELITE 180
>sp|P46785|SECY_STRCO Protein translocase subunit SecY OS=Streptomyces coelicolor (strain
ATCC BAA-471 / A3(2) / M145) GN=secY PE=3 SV=2
Length = 437
Score = 152 bits (384), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/181 (41%), Positives = 116/181 (64%), Gaps = 11/181 (6%)
Query: 28 GAHIPIPSINYSQLTKLFEKNQNN--ILGMFNMFSGGALSRLTIFSLGIMPYISSSIIMQ 85
G HIPIP ++Y + + ++ N + G+ NMFSGGAL ++T+F+LGIMPYI++SII+Q
Sbjct: 31 GTHIPIPGVDYKNVQECVDQASGNQGLFGLVNMFSGGALLQITVFALGIMPYITASIILQ 90
Query: 86 LLSSIMPKFENLKKEGELGKYKIAQYIRFSTLILAILQGSGISLILKS---------QKN 136
LL+ ++P+ E LKKEG+ G KI QY R+ T+ LAILQG+G+ +S
Sbjct: 91 LLTVVIPRLEALKKEGQAGTAKITQYTRYLTVALAILQGTGLVATARSGALFSGCTVAGQ 150
Query: 137 LVLDTSFYFHFTTVLTLVSGTIFLMWLSEQITEYGLGNGTSIIICSGIISSFPNILINLL 196
+V D + + V+ + +GT +MWL E IT+ G+GNG SI++ I ++FP+ L +
Sbjct: 151 IVPDQAIFTTVVMVICMTAGTCVVMWLGELITDRGIGNGMSILMFISIAATFPSALWAIK 210
Query: 197 K 197
K
Sbjct: 211 K 211
>sp|P49977|SECY_STRLI Protein translocase subunit SecY OS=Streptomyces lividans GN=secY
PE=3 SV=1
Length = 437
Score = 152 bits (384), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/181 (41%), Positives = 116/181 (64%), Gaps = 11/181 (6%)
Query: 28 GAHIPIPSINYSQLTKLFEKNQNN--ILGMFNMFSGGALSRLTIFSLGIMPYISSSIIMQ 85
G HIPIP ++Y + + ++ N + G+ NMFSGGAL ++T+F+LGIMPYI++SII+Q
Sbjct: 31 GTHIPIPGVDYKNVQECVDQASGNQGLFGLVNMFSGGALLQITVFALGIMPYITASIILQ 90
Query: 86 LLSSIMPKFENLKKEGELGKYKIAQYIRFSTLILAILQGSGISLILKS---------QKN 136
LL+ ++P+ E LKKEG+ G KI QY R+ T+ LAILQG+G+ +S
Sbjct: 91 LLTVVIPRLEALKKEGQAGTAKITQYTRYLTVALAILQGTGLVATARSGALFSGCTVAGQ 150
Query: 137 LVLDTSFYFHFTTVLTLVSGTIFLMWLSEQITEYGLGNGTSIIICSGIISSFPNILINLL 196
+V D + + V+ + +GT +MWL E IT+ G+GNG SI++ I ++FP+ L +
Sbjct: 151 IVPDQAIFTTVVMVICMTAGTCVVMWLGELITDRGIGNGMSILMFISIAATFPSALWAIK 210
Query: 197 K 197
K
Sbjct: 211 K 211
>sp|Q59916|SECY_STRGR Protein translocase subunit SecY OS=Streptomyces griseus GN=secY
PE=3 SV=1
Length = 437
Score = 152 bits (384), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/175 (45%), Positives = 115/175 (65%), Gaps = 10/175 (5%)
Query: 28 GAHIPIPSINYSQLTKLFEK-NQNNILGMFNMFSGGALSRLTIFSLGIMPYISSSIIMQL 86
GAHIP P ++YS++ + ++ + +LG+ MFSGGAL ++TIF+LGIMPYI++SII+QL
Sbjct: 31 GAHIPAPGVDYSKVQQCIDQADSGGLLGLMQMFSGGALLQITIFALGIMPYITASIILQL 90
Query: 87 LSSIMPKFENLKKEGELGKYKIAQYIRFSTLILAILQGSGISLILKSQK---------NL 137
L+ ++P+ E LKKEG+ G KI QY R+ T+ LAILQG+G+ +S +
Sbjct: 91 LTVVIPRLEALKKEGQSGTAKITQYTRYLTVALAILQGTGLVATARSGALFQNCSVGSQI 150
Query: 138 VLDTSFYFHFTTVLTLVSGTIFLMWLSEQITEYGLGNGTSIIICSGIISSFPNIL 192
V D S + VLT+ +GT +MWL E IT+ G+GNG SI + I ++FP L
Sbjct: 151 VADKSIFTTIIMVLTMTAGTPPVMWLGELITDRGIGNGMSIPMFISIAATFPGAL 205
>sp|P43416|SECY_STRSC Protein translocase subunit SecY OS=Streptomyces scabies GN=secY
PE=3 SV=1
Length = 437
Score = 152 bits (383), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/179 (44%), Positives = 121/179 (67%), Gaps = 11/179 (6%)
Query: 28 GAHIPIPSINYSQLTKLFEKNQNN--ILGMFNMFSGGALSRLTIFSLGIMPYISSSIIMQ 85
G HIPIP ++YS + ++ ++N + G+ NMFSGGAL ++TIF+LGIMPYI++SII+Q
Sbjct: 31 GTHIPIPGVDYSAVQFCIDQTKSNSGLFGLVNMFSGGALLQITIFALGIMPYITASIILQ 90
Query: 86 LLSSIMPKFENLKKEGELGKYKIAQYIRFSTLILAILQGSGISLILKS---------QKN 136
LL+ ++P+ E LKKEG+ G KI QY R+ T+ LA+LQG+G+ +S N
Sbjct: 91 LLTVVIPRLEALKKEGQSGTAKITQYTRYLTVALAVLQGTGLVATARSGALFSQCPQANN 150
Query: 137 LVLDTSFYFHFTTVLTLVSGTIFLMWLSEQITEYGLGNGTSIIICSGIISSFPNILINL 195
+V D S + T V+T+ +GT +MWL E IT+ G+GNG SI++ I ++FP+ L ++
Sbjct: 151 IVPDDSIFTTLTMVVTMTAGTAVVMWLGELITDRGIGNGMSILMFISIAATFPSALWSI 209
>sp|Q89A85|SECY_BUCBP Protein translocase subunit SecY OS=Buchnera aphidicola subsp.
Baizongia pistaciae (strain Bp) GN=secY PE=3 SV=1
Length = 441
Score = 152 bits (383), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 92/176 (52%), Positives = 131/176 (74%), Gaps = 3/176 (1%)
Query: 28 GAHIPIPSINYSQLTKLFEKNQNNILGMFNMFSGGALSRLTIFSLGIMPYISSSIIMQLL 87
G++IPIP I+ L L E ++ I+ MFNMFSGGALSR +IF+LGIMP+ISSSII+Q+L
Sbjct: 37 GSYIPIPGIDTVALASLLEHHRGTIIEMFNMFSGGALSRASIFALGIMPFISSSIIVQIL 96
Query: 88 SSIMPKFENLKKEGELGKYKIAQYIRFSTLILAILQGSGISLILKS---QKNLVLDTSFY 144
+ I PKF +KK+GE G+++I +YIR+ TLILA LQ G+S+ L + K++++D S
Sbjct: 97 TLIHPKFIEMKKDGEQGRHRINKYIRYITLILAALQSFGMSISLPNIPGLKDVIIDPSIS 156
Query: 145 FHFTTVLTLVSGTIFLMWLSEQITEYGLGNGTSIIICSGIISSFPNILINLLKLVK 200
F+ +++L++GTIFLMWL E ITE G+GNG SIII SGI+S P+ +N ++ V+
Sbjct: 157 FYGIAIISLITGTIFLMWLGELITEKGIGNGISIIIFSGIVSGLPSSFLNTVEKVR 212
>sp|O25879|SECY_HELPY Protein translocase subunit SecY OS=Helicobacter pylori (strain
ATCC 700392 / 26695) GN=secY PE=3 SV=1
Length = 420
Score = 149 bits (377), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/184 (41%), Positives = 121/184 (65%), Gaps = 7/184 (3%)
Query: 29 AHIPIPSINYSQLTKLFEKNQNNILGMFNMFSGGALSRLTIFSLGIMPYISSSIIMQLLS 88
A+IPIP ++ + + F+ N NN LG+FNMFSG A+SRL+I SLGIMPYI+SSIIM+LLS
Sbjct: 23 AYIPIPGVDLAAIKAFFDSNSNNALGLFNMFSGNAVSRLSIISLGIMPYITSSIIMELLS 82
Query: 89 SIMPKFENLKKEGELGKYKIAQYIRFSTLILAILQGSGISLILKS-----QKNLVLDTSF 143
+ P +KKE + G K Q +R+ T+++ ++Q +S+ L+S +++D
Sbjct: 83 ATFPNLAKMKKERD-GMQKYMQIVRYLTILITLIQAVSVSVGLRSISGGANGAIMIDMQV 141
Query: 144 YFHFTTVLTLVSGTIFLMWLSEQITEYGLGNGTSIIICSGIISSFPNILINLLKLVKIDL 203
F + ++++GT+ LMW+ EQIT+ G+GNG S+II +GI+S P+ + LV +
Sbjct: 142 -FMIVSAFSMLTGTMLLMWIGEQITQRGVGNGISLIIFAGIVSGIPSAISGTFNLVNTGV 200
Query: 204 VNII 207
+NI+
Sbjct: 201 INIL 204
>sp|Q9ZJS9|SECY_HELPJ Protein translocase subunit SecY OS=Helicobacter pylori (strain
J99) GN=secY PE=3 SV=1
Length = 420
Score = 149 bits (377), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/184 (41%), Positives = 121/184 (65%), Gaps = 7/184 (3%)
Query: 29 AHIPIPSINYSQLTKLFEKNQNNILGMFNMFSGGALSRLTIFSLGIMPYISSSIIMQLLS 88
A+IPIP ++ + + F+ N NN LG+FNMFSG A+SRL+I SLGIMPYI+SSIIM+LLS
Sbjct: 23 AYIPIPGVDLAAIKAFFDSNSNNALGLFNMFSGNAVSRLSIISLGIMPYITSSIIMELLS 82
Query: 89 SIMPKFENLKKEGELGKYKIAQYIRFSTLILAILQGSGISLILKS-----QKNLVLDTSF 143
+ P +KKE + G K Q +R+ T+++ ++Q +S+ L+S +++D
Sbjct: 83 ATFPNLAKMKKERD-GMQKYMQIVRYLTILITLIQAVSVSVGLRSISGGANGAIMIDMQV 141
Query: 144 YFHFTTVLTLVSGTIFLMWLSEQITEYGLGNGTSIIICSGIISSFPNILINLLKLVKIDL 203
F + ++++GT+ LMW+ EQIT+ G+GNG S+II +GI+S P+ + LV +
Sbjct: 142 -FMIVSAFSMLTGTMLLMWIGEQITQRGVGNGISLIIFAGIVSGIPSAISGTFNLVNTGV 200
Query: 204 VNII 207
+NI+
Sbjct: 201 INIL 204
>sp|P38376|SECY_CORGL Protein translocase subunit SecY OS=Corynebacterium glutamicum
(strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 /
NCIMB 10025) GN=secY PE=3 SV=1
Length = 440
Score = 147 bits (371), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 80/204 (39%), Positives = 128/204 (62%), Gaps = 21/204 (10%)
Query: 28 GAHIPIPSINYSQLT---KLFEKNQNNILGMFNMFSGGALSRLTIFSLGIMPYISSSIIM 84
GA IP P ++Y+ ++ + ++Q+++ + N+FSGGAL +L+IF++GIMPYI++SII+
Sbjct: 30 GAQIPSPGVDYATISGRLRDLTQDQSSVYSLINLFSGGALLQLSIFAIGIMPYITASIIV 89
Query: 85 QLLSSIMPKFENLKKEGELGKYKIAQYIRFSTLILAILQGSGI-SLILKSQ------KNL 137
QLL+ ++P FE LKKEG+ G+ K+ QY R+ T+ LA+LQ SGI +L + Q + L
Sbjct: 90 QLLTVVIPHFEELKKEGQSGQAKMMQYTRYLTVALALLQSSGIVALADREQLLGAGIRVL 149
Query: 138 VLDTSFYFHFTTVLTLVSGTIFLMWLSEQITEYGLGNGTSIIICSGIISSFPNILINLLK 197
D +F+ V+T+ +G + +MW+ E ITE G+GNG S++I +GI + P
Sbjct: 150 SADRNFFDLIVLVITMTAGAVLVMWMGELITEKGVGNGMSLLIFAGIATRLPT------- 202
Query: 198 LVKIDLVNIIENLPNATFKVKLEN 221
D +NI+ N F V L +
Sbjct: 203 ----DGMNILGNSGGVVFAVVLAS 222
>sp|Q5SHQ8|SECY_THET8 Protein translocase subunit SecY OS=Thermus thermophilus (strain
HB8 / ATCC 27634 / DSM 579) GN=secY PE=1 SV=1
Length = 438
Score = 143 bits (361), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/224 (34%), Positives = 126/224 (56%), Gaps = 5/224 (2%)
Query: 28 GAHIPIPSINYSQLTKLFEKNQNNILGMFNMFSGGALSRLTIFSLGIMPYISSSIIMQLL 87
GA IP P ++ ++ + Q + G+ N+FSGG R +IF+LGIMPYI+++IIMQ+L
Sbjct: 31 GAFIPTPGVDLDKIQEFLRTAQGGVFGIINLFSGGNFERFSIFALGIMPYITAAIIMQIL 90
Query: 88 SSIMPKFENLKKEGELGKYKIAQYIRFSTLILAILQGSGIS-LILKSQKNLVLDTSF--- 143
+++P E L KEGE G+ I QY R + L QG ++ L ++ L +
Sbjct: 91 VTVVPALEKLSKEGEEGRRIINQYTRIGGIALGAFQGFFLATAFLGAEGGRFLLPGWSPG 150
Query: 144 -YFHFTTVLTLVSGTIFLMWLSEQITEYGLGNGTSIIICSGIISSFPNILINLLKLVKID 202
+F F V+T V+G L+W++E+ITEYG+GNGTS+II +GI+ + ++ + L++
Sbjct: 151 PFFWFVVVVTQVAGIALLLWMAERITEYGIGNGTSLIIFAGIVVEWLPQILRTIGLIRTG 210
Query: 203 LVNIIENLPNATFKVKLENDHVILGHISGKMRMNYIRILPGDKV 246
VN++ L F V + ++ + Y R + G +V
Sbjct: 211 EVNLVAFLFFLAFIVLAFAGMAAVQQAERRIPVQYARKVVGRRV 254
>sp|P38375|SECY_BACHD Protein translocase subunit SecY OS=Bacillus halodurans (strain
ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
GN=secY PE=3 SV=2
Length = 430
Score = 139 bits (349), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/177 (43%), Positives = 108/177 (61%), Gaps = 6/177 (3%)
Query: 28 GAHIPIPSINYSQLTKLFEKNQNNILGMFNMFSGGALSRLTIFSLGIMPYISSSIIMQLL 87
G+ IP+P N L + +Q N G N F GGAL +IF++GIMPYI++SI+MQLL
Sbjct: 31 GSFIPVPGTNREVLDFV---DQANAFGFLNTFGGGALGNFSIFAMGIMPYITASIVMQLL 87
Query: 88 S-SIMPKFENLKKEGELGKYKIAQYIRFSTLILAILQGSGISLILKSQ-KNLVLDTSFYF 145
++PKF KEGE G+ K+AQ+ R+ T++L +Q G+S+ + L+ + S
Sbjct: 88 QMDVVPKFAEWAKEGEAGRRKLAQFTRYGTIVLGFIQALGMSVGFNNFFPGLIPNPSVSV 147
Query: 146 HFTTVLTLVSGTIFLMWLSEQITEYGLGNGTSIIICSGIISSFPNILINLLKLVKID 202
+ L L +GT FLMWL EQIT G+GNG SIII +GI + PN L NL+ +I
Sbjct: 148 YLFIALVLTAGTAFLMWLGEQITAKGVGNGISIIIFAGIAAGIPNGL-NLIYSTRIQ 203
>sp|P77964|SECY_SYNY3 Protein translocase subunit SecY OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=secY PE=3 SV=1
Length = 442
Score = 135 bits (341), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/167 (42%), Positives = 112/167 (67%), Gaps = 7/167 (4%)
Query: 28 GAHIPIPSINYSQLTKLFEKNQNNILGMFNMFSGGALSRLTIFSLGIMPYISSSIIMQLL 87
G IP+P I+ ++ N N+++G N+F+GG LS + IF+LGI+PYI++SIIMQLL
Sbjct: 41 GIFIPVPDIDRQAFSQAI--NDNSVIGFLNIFTGGGLSTVGIFALGILPYINASIIMQLL 98
Query: 88 SSIMPKFENLKK-EGELGKYKIAQYIRFSTLILAILQGSGISL-ILKSQKNLVLDTSFYF 145
++ +P E+L+K EGE G+ KI+QY R+ I+QG G+++ +L+ N + F
Sbjct: 99 TAAIPALEDLQKNEGEAGRRKISQYSRYIAFGWCIIQGLGLTVGLLRPYAN---NYGPLF 155
Query: 146 HFTTVLTLVSGTIFLMWLSEQITEYGLGNGTSIIICSGIISSFPNIL 192
F TVL + +G++F+MW+SE ITE G+GNG S++I I+++ P L
Sbjct: 156 IFQTVLAITAGSMFVMWISELITERGIGNGASLLIFVNIVATLPQTL 202
>sp|P16336|SECY_BACSU Protein translocase subunit SecY OS=Bacillus subtilis (strain 168)
GN=secY PE=3 SV=1
Length = 431
Score = 135 bits (341), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/165 (43%), Positives = 104/165 (63%), Gaps = 6/165 (3%)
Query: 28 GAHIPIPSINYSQLTKLFEKNQNNILGMFNMFSGGALSRLTIFSLGIMPYISSSIIMQLL 87
GA IP+P +N L ++Q + + N F GGAL + +IF++GI PYI++SII+QLL
Sbjct: 31 GAFIPVPYVNAEALQ---AQSQMGVFDLLNTFGGGALYQFSIFAMGITPYITASIIIQLL 87
Query: 88 S-SIMPKFENLKKEGELGKYKIAQYIRFSTLILAILQGSGISLILKSQKN--LVLDTSFY 144
++PKF K+GE+G+ K+AQ+ R+ T++L +Q G+S + N L+ +
Sbjct: 88 QMDVVPKFTEWSKQGEVGRRKLAQFTRYFTIVLGFIQALGMSYGFNNLANGMLIEKSGVS 147
Query: 145 FHFTTVLTLVSGTIFLMWLSEQITEYGLGNGTSIIICSGIISSFP 189
+ L L GT FLMWL EQIT +G+GNG SIII +GI+SS P
Sbjct: 148 TYLIIALVLTGGTAFLMWLGEQITSHGVGNGISIIIFAGIVSSIP 192
>sp|Q05207|SECY_BACLD Protein translocase subunit SecY OS=Bacillus licheniformis (strain
DSM 13 / ATCC 14580) GN=secY PE=3 SV=2
Length = 431
Score = 134 bits (337), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 104/166 (62%), Gaps = 6/166 (3%)
Query: 28 GAHIPIPSINYSQLTKLFEKNQNNILGMFNMFSGGALSRLTIFSLGIMPYISSSIIMQLL 87
G+ IP+P +N L ++Q ++ G+ N F GGAL +I ++GIMPYI++SII+QLL
Sbjct: 31 GSFIPVPHVNTEVLK---AQDQMSVFGILNTFGGGALFNFSILAMGIMPYITASIIIQLL 87
Query: 88 S-SIMPKFENLKKEGELGKYKIAQYIRFSTLILAILQGSGISLILKSQKN--LVLDTSFY 144
++PKF K+GE+G+ K+AQ+ R+ T++L +Q G+S + L+ D
Sbjct: 88 QMDVVPKFTEWSKQGEVGRRKLAQFTRYFTIVLGFIQALGMSYGFNNMAGGALITDPGVG 147
Query: 145 FHFTTVLTLVSGTIFLMWLSEQITEYGLGNGTSIIICSGIISSFPN 190
+ + L +GT FLMWL EQIT +G+GNG SIII +GI++ P
Sbjct: 148 TYLLIAIVLTAGTAFLMWLGEQITSHGVGNGISIIIFAGIVAGIPQ 193
>sp|P0A5Z2|SECY_MYCTU Protein translocase subunit SecY OS=Mycobacterium tuberculosis
GN=secY PE=3 SV=1
Length = 441
Score = 134 bits (337), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 106/173 (61%), Gaps = 11/173 (6%)
Query: 28 GAHIPIPSINYSQLTKLFEK----NQNNILGMFNMFSGGALSRLTIFSLGIMPYISSSII 83
GA +P P +N+ + + ++ I + N+FSGGAL +LT+F++G+MPYI++SII
Sbjct: 31 GAALPSPGVNFPNVQQCIKEASAGEAGQIYSLINLFSGGALLKLTVFAVGVMPYITASII 90
Query: 84 MQLLSSIMPKFENLKKEGELGKYKIAQYIRFSTLILAILQGSGI-------SLILKSQKN 136
+QLL+ ++P+FE L+KEG+ G+ K+ QY R+ + LAILQ + I L+ +
Sbjct: 91 VQLLTVVIPRFEELRKEGQAGQSKMTQYTRYLAIALAILQATSIVALAANGGLLQGCSLD 150
Query: 137 LVLDTSFYFHFTTVLTLVSGTIFLMWLSEQITEYGLGNGTSIIICSGIISSFP 189
++ D S + VL + G +MW+ E ITE G+GNG S++I GI + P
Sbjct: 151 IIADQSIFTLVVIVLVMTGGAALVMWMGELITERGIGNGMSLLIFVGIAARIP 203
>sp|P0A5Z3|SECY_MYCBO Protein translocase subunit SecY OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=secY PE=3 SV=1
Length = 441
Score = 134 bits (337), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 106/173 (61%), Gaps = 11/173 (6%)
Query: 28 GAHIPIPSINYSQLTKLFEK----NQNNILGMFNMFSGGALSRLTIFSLGIMPYISSSII 83
GA +P P +N+ + + ++ I + N+FSGGAL +LT+F++G+MPYI++SII
Sbjct: 31 GAALPSPGVNFPNVQQCIKEASAGEAGQIYSLINLFSGGALLKLTVFAVGVMPYITASII 90
Query: 84 MQLLSSIMPKFENLKKEGELGKYKIAQYIRFSTLILAILQGSGI-------SLILKSQKN 136
+QLL+ ++P+FE L+KEG+ G+ K+ QY R+ + LAILQ + I L+ +
Sbjct: 91 VQLLTVVIPRFEELRKEGQAGQSKMTQYTRYLAIALAILQATSIVALAANGGLLQGCSLD 150
Query: 137 LVLDTSFYFHFTTVLTLVSGTIFLMWLSEQITEYGLGNGTSIIICSGIISSFP 189
++ D S + VL + G +MW+ E ITE G+GNG S++I GI + P
Sbjct: 151 IIADQSIFTLVVIVLVMTGGAALVMWMGELITERGIGNGMSLLIFVGIAARIP 203
>sp|Q05217|SECY_STACT Protein translocase subunit SecY OS=Staphylococcus carnosus (strain
TM300) GN=secY PE=3 SV=2
Length = 430
Score = 133 bits (335), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 110/175 (62%), Gaps = 9/175 (5%)
Query: 28 GAHIPIPSINYSQLTKLFEKNQNN--ILGMFNMFSGGALSRLTIFSLGIMPYISSSIIMQ 85
G +IP P +N + F+ NQ + + + N F GGAL +IF++GIMPYI++SI+MQ
Sbjct: 31 GTYIPAPGVNPAA----FDNNQGSQGVTDLLNTFGGGALKNFSIFAMGIMPYITASIVMQ 86
Query: 86 LLS-SIMPKFENLKKEGELGKYKIAQYIRFSTLILAILQGSGISLILKS--QKNLVLDTS 142
LL I+PKF K+G++G+ K+ R+ +ILA +Q G++ + + L++D S
Sbjct: 87 LLQMDIVPKFTEWAKQGDVGRKKLNNVTRYFAIILAFIQSIGMAFQFNNYLKGALIIDPS 146
Query: 143 FYFHFTTVLTLVSGTIFLMWLSEQITEYGLGNGTSIIICSGIISSFPNILINLLK 197
+ + L +GT FL+WL EQIT+YG+GNG SIII +GI+S+ P+ LI +
Sbjct: 147 PMSYLLIAIVLTTGTAFLLWLGEQITQYGVGNGISIIIFAGILSTLPSSLIQFYQ 201
>sp|P51297|SECY_PORPU Protein translocase subunit SecY OS=Porphyra purpurea GN=secY PE=3
SV=1
Length = 411
Score = 132 bits (332), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 103/163 (63%), Gaps = 6/163 (3%)
Query: 28 GAHIPIPSINYSQLTKLFEKNQNNILGMFNMFSGGALSRLTIFSLGIMPYISSSIIMQLL 87
G IP+P I++ EKN ++ N+FSGG S + IF+LGI+PYI+SSI+MQLL
Sbjct: 24 GIFIPVPGIDHDAFYASVEKN--TLVNFLNIFSGGGFSTIGIFALGIVPYINSSIVMQLL 81
Query: 88 SSIMPKFENLKK-EGELGKYKIAQYIRFSTLILAILQGSGISLILKSQKNLVLDTSFYFH 146
+ I+P E L+K EGELG+ KI Q R+ L A LQ IS+ +K V + +F F
Sbjct: 82 TKIIPDLEKLQKEEGELGRQKITQITRYLALGWATLQSGAISIWVKP---YVFNWNFTFV 138
Query: 147 FTTVLTLVSGTIFLMWLSEQITEYGLGNGTSIIICSGIISSFP 189
+VL L +G++ +MWLSE ITE G+GNG S++I I+S P
Sbjct: 139 CESVLALTAGSMIIMWLSELITEKGIGNGASLLIFQNIVSGLP 181
>sp|Q1XDJ1|SECY_PORYE Protein translocase subunit SecY OS=Porphyra yezoensis GN=secY PE=3
SV=1
Length = 411
Score = 132 bits (332), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 103/163 (63%), Gaps = 6/163 (3%)
Query: 28 GAHIPIPSINYSQLTKLFEKNQNNILGMFNMFSGGALSRLTIFSLGIMPYISSSIIMQLL 87
G IP+P I++ EKN ++ N+FSGG S + IF+LGI+PYI+SSI+MQLL
Sbjct: 24 GIFIPVPGIDHDAFYASVEKN--TLVNFLNIFSGGGFSTIGIFALGIVPYINSSIVMQLL 81
Query: 88 SSIMPKFENLKK-EGELGKYKIAQYIRFSTLILAILQGSGISLILKSQKNLVLDTSFYFH 146
+ I+P E L+K EGELG+ KI Q R+ L A LQ IS+ +K V + +F F
Sbjct: 82 TKIVPNLEKLQKEEGELGRQKITQITRYLALGWATLQSGAISIWVKPY---VFNWNFAFV 138
Query: 147 FTTVLTLVSGTIFLMWLSEQITEYGLGNGTSIIICSGIISSFP 189
+VL L +G++ +MWLSE ITE G+GNG S++I I+S P
Sbjct: 139 CESVLALTAGSMIIMWLSELITEKGIGNGASLLIFQNIVSGLP 181
>sp|Q9X1I9|SECY_THEMA Protein translocase subunit SecY OS=Thermotoga maritima (strain
ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=secY PE=1
SV=1
Length = 431
Score = 132 bits (331), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 124/197 (62%), Gaps = 18/197 (9%)
Query: 28 GAHIPIPSINYSQLTKLFEK-----NQNNILGMFNMFSGGALSRLTIFSLGIMPYISSSI 82
G +IP+P +N ++F + IL +++F+GGALSR ++F++ + PYI++SI
Sbjct: 31 GIYIPVPGLNLEAWGEIFRRIAETAGVAGILSFYDVFTGGALSRFSVFTMSVTPYITASI 90
Query: 83 IMQLLSSIMPKFENLKKEGELGKYKIAQYIRFSTLILAILQGSGISLIL-KSQKNLVLDT 141
I+QLL+S+MP + + +EGE G+ K A+Y R TL++ Q +S L +S ++V
Sbjct: 91 ILQLLASVMPSLKEMLREGEEGRKKFAKYTRRLTLLIGGFQAFFVSFSLARSNPDMVAPG 150
Query: 142 SFYFHFT--TVLTLVSGTIFLMWLSEQITEYGLGNGTSIIICSGIISSFPNIL------- 192
FT + +++++GT+FL+WL E+ITE G+GNG SI+I +GI++ +P+ +
Sbjct: 151 VNVLQFTVLSTMSMLAGTMFLLWLGERITEKGIGNGISILIFAGIVARYPSYIRQAYLGG 210
Query: 193 INLLK---LVKIDLVNI 206
+NLL+ L+ + L+ I
Sbjct: 211 LNLLEWIFLIAVALITI 227
>sp|P0A4H1|SECY_SYNP6 Protein translocase subunit SecY OS=Synechococcus sp. (strain ATCC
27144 / PCC 6301 / SAUG 1402/1) GN=secY PE=3 SV=1
Length = 439
Score = 130 bits (326), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 111/176 (63%), Gaps = 6/176 (3%)
Query: 28 GAHIPIPSINYSQLTKLFEKNQN--NILGMFNMFSGGALSRLTIFSLGIMPYISSSIIMQ 85
G IP+P I+ + + N N ++G ++FSGG LS L +F+LGI+PYI++SII+Q
Sbjct: 41 GIFIPVPGIDRVAFSNDLQGNANLGGVIGFLDIFSGGGLSALGVFALGILPYINASIILQ 100
Query: 86 LLSSIMPKFENLKK-EGELGKYKIAQYIRFSTLILAILQGSGISLILKSQKNLVLDTSFY 144
LL++ +P E+L+K EGE G+ KIAQ R+ +L A+LQ I++ + +
Sbjct: 101 LLTAAVPALEDLQKNEGEAGRRKIAQLTRYVSLGWALLQSIVIAVWV---TRYAVTPGPL 157
Query: 145 FHFTTVLTLVSGTIFLMWLSEQITEYGLGNGTSIIICSGIISSFPNILINLLKLVK 200
F T L LV+G++F+MW+SE ITE G+GNG S++I I+++ P L L+L +
Sbjct: 158 FTIQTALALVAGSMFVMWISELITERGIGNGASLLIFLNIVATLPRSLQQTLELAQ 213
>sp|P0A4H0|SECY_SYNE7 Protein translocase subunit SecY OS=Synechococcus elongatus (strain
PCC 7942) GN=secY PE=3 SV=1
Length = 439
Score = 130 bits (326), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 111/176 (63%), Gaps = 6/176 (3%)
Query: 28 GAHIPIPSINYSQLTKLFEKNQN--NILGMFNMFSGGALSRLTIFSLGIMPYISSSIIMQ 85
G IP+P I+ + + N N ++G ++FSGG LS L +F+LGI+PYI++SII+Q
Sbjct: 41 GIFIPVPGIDRVAFSNDLQGNANLGGVIGFLDIFSGGGLSALGVFALGILPYINASIILQ 100
Query: 86 LLSSIMPKFENLKK-EGELGKYKIAQYIRFSTLILAILQGSGISLILKSQKNLVLDTSFY 144
LL++ +P E+L+K EGE G+ KIAQ R+ +L A+LQ I++ + +
Sbjct: 101 LLTAAVPALEDLQKNEGEAGRRKIAQLTRYVSLGWALLQSIVIAVWV---TRYAVTPGPL 157
Query: 145 FHFTTVLTLVSGTIFLMWLSEQITEYGLGNGTSIIICSGIISSFPNILINLLKLVK 200
F T L LV+G++F+MW+SE ITE G+GNG S++I I+++ P L L+L +
Sbjct: 158 FTIQTALALVAGSMFVMWISELITERGIGNGASLLIFLNIVATLPRSLQQTLELAQ 213
>sp|O33006|SECY_MYCLE Protein translocase subunit SecY OS=Mycobacterium leprae (strain
TN) GN=secY PE=3 SV=1
Length = 438
Score = 129 bits (323), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 104/172 (60%), Gaps = 14/172 (8%)
Query: 29 AHIPIPSINYSQLTKLFEK----NQNNILGMFNMFSGGALSRLTIFSLGIMPYISSSIIM 84
A +P P +NY + + ++ I + N+FSGGAL +LT+ G+MPYI++SII+
Sbjct: 32 AALPSPGVNYRHVQQCIQEATAGEAGEIYSLINLFSGGALLKLTV---GVMPYITASIIV 88
Query: 85 QLLSSIMPKFENLKKEGELGKYKIAQYIRFSTLILAILQGSGI-------SLILKSQKNL 137
QLL+ ++P+FE L+KEG+ G+ K+ QY R+ + LA+LQ + I L+ Q+++
Sbjct: 89 QLLTVVIPRFEELRKEGQAGQAKMTQYTRYLAIALAVLQATSIVALAANGGLLQGCQEDI 148
Query: 138 VLDTSFYFHFTTVLTLVSGTIFLMWLSEQITEYGLGNGTSIIICSGIISSFP 189
+ D S + VL + G +MW+ E ITE G+GNG S++I GI + P
Sbjct: 149 ISDQSIFSLVVIVLVMTGGAALVMWMGELITERGIGNGMSLLIFVGIAARIP 200
>sp|Q8CNF3|SECY_STAES Protein translocase subunit SecY OS=Staphylococcus epidermidis
(strain ATCC 12228) GN=secY PE=3 SV=1
Length = 430
Score = 128 bits (321), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 104/170 (61%), Gaps = 9/170 (5%)
Query: 28 GAHIPIPSINYSQLTKLFEKNQNNILGMFNMFSGGALSRLTIFSLGIMPYISSSIIMQLL 87
G +IP P +N + + N F GGAL R +IF++GIMPYI++SI+MQLL
Sbjct: 31 GTYIPAPGVNPEAFNH--PQGSQGATELLNTFGGGALKRFSIFAMGIMPYITASIVMQLL 88
Query: 88 S-SIMPKFENLKKEGELGKYKIAQYIRFSTLILAILQGSGISL----ILKSQKNLVLDTS 142
I+PKF K+GE+G+ KI R+ +ILA +Q G++ LK Q L+++ S
Sbjct: 89 QMDIVPKFTEWAKQGEMGRRKINNVTRYFAIILAFIQSIGMAFQFNNYLKGQ--LIIEKS 146
Query: 143 FYFHFTTVLTLVSGTIFLMWLSEQITEYGLGNGTSIIICSGIISSFPNIL 192
+ + L +GT FL+WL +QIT++G+GNG S+II +GI+S+ P+ L
Sbjct: 147 VMSYLLIAVVLTAGTAFLIWLGDQITQFGVGNGISLIIFAGILSTLPSSL 196
>sp|Q5HM19|SECY_STAEQ Protein translocase subunit SecY OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=secY PE=3 SV=1
Length = 430
Score = 128 bits (321), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 104/170 (61%), Gaps = 9/170 (5%)
Query: 28 GAHIPIPSINYSQLTKLFEKNQNNILGMFNMFSGGALSRLTIFSLGIMPYISSSIIMQLL 87
G +IP P +N + + N F GGAL R +IF++GIMPYI++SI+MQLL
Sbjct: 31 GTYIPAPGVNPEAFNH--PQGSQGATELLNTFGGGALKRFSIFAMGIMPYITASIVMQLL 88
Query: 88 S-SIMPKFENLKKEGELGKYKIAQYIRFSTLILAILQGSGISL----ILKSQKNLVLDTS 142
I+PKF K+GE+G+ KI R+ +ILA +Q G++ LK Q L+++ S
Sbjct: 89 QMDIVPKFTEWAKQGEMGRRKINNVTRYFAIILAFIQSIGMAFQFNNYLKGQ--LIIEKS 146
Query: 143 FYFHFTTVLTLVSGTIFLMWLSEQITEYGLGNGTSIIICSGIISSFPNIL 192
+ + L +GT FL+WL +QIT++G+GNG S+II +GI+S+ P+ L
Sbjct: 147 VMSYLLIAVVLTAGTAFLIWLGDQITQFGVGNGISLIIFAGILSTLPSSL 196
>sp|Q7A086|SECY_STAAW Protein translocase subunit SecY OS=Staphylococcus aureus (strain
MW2) GN=secY PE=3 SV=1
Length = 430
Score = 125 bits (314), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 103/171 (60%), Gaps = 5/171 (2%)
Query: 28 GAHIPIPSINYSQLTKLFEKNQNNILGMFNMFSGGALSRLTIFSLGIMPYISSSIIMQLL 87
G +IP P +N + + + N F GGAL R +IF++GI+PYI++SI+MQLL
Sbjct: 31 GTYIPAPGVNPAAFDN--PQGSQGATELLNTFGGGALKRFSIFAMGIVPYITASIVMQLL 88
Query: 88 S-SIMPKFENLKKEGELGKYKIAQYIRFSTLILAILQGSGISLILKS--QKNLVLDTSFY 144
I+PKF K+GE+G+ K+ R+ + LA +Q G++ + + L+++ S
Sbjct: 89 QMDIVPKFSEWAKQGEVGRRKLNNVTRYLAISLAFIQSIGMAFQFNNYLKGALIINQSIM 148
Query: 145 FHFTTVLTLVSGTIFLMWLSEQITEYGLGNGTSIIICSGIISSFPNILINL 195
+ L L +GT FL+WL +QIT++G+GNG SIII +GI+S+ P LI
Sbjct: 149 SYLLIALVLTAGTAFLIWLGDQITQFGVGNGISIIIFAGILSTLPASLIQF 199
>sp|Q6G791|SECY_STAAS Protein translocase subunit SecY OS=Staphylococcus aureus (strain
MSSA476) GN=secY PE=3 SV=1
Length = 430
Score = 125 bits (314), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 103/171 (60%), Gaps = 5/171 (2%)
Query: 28 GAHIPIPSINYSQLTKLFEKNQNNILGMFNMFSGGALSRLTIFSLGIMPYISSSIIMQLL 87
G +IP P +N + + + N F GGAL R +IF++GI+PYI++SI+MQLL
Sbjct: 31 GTYIPAPGVNPAAFDN--PQGSQGATELLNTFGGGALKRFSIFAMGIVPYITASIVMQLL 88
Query: 88 S-SIMPKFENLKKEGELGKYKIAQYIRFSTLILAILQGSGISLILKS--QKNLVLDTSFY 144
I+PKF K+GE+G+ K+ R+ + LA +Q G++ + + L+++ S
Sbjct: 89 QMDIVPKFSEWAKQGEVGRRKLNNVTRYLAISLAFIQSIGMAFQFNNYLKGALIINQSIM 148
Query: 145 FHFTTVLTLVSGTIFLMWLSEQITEYGLGNGTSIIICSGIISSFPNILINL 195
+ L L +GT FL+WL +QIT++G+GNG SIII +GI+S+ P LI
Sbjct: 149 SYLLIALVLTAGTAFLIWLGDQITQFGVGNGISIIIFAGILSTLPASLIQF 199
>sp|Q6GEK3|SECY_STAAR Protein translocase subunit SecY OS=Staphylococcus aureus (strain
MRSA252) GN=secY PE=3 SV=1
Length = 430
Score = 125 bits (314), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 103/171 (60%), Gaps = 5/171 (2%)
Query: 28 GAHIPIPSINYSQLTKLFEKNQNNILGMFNMFSGGALSRLTIFSLGIMPYISSSIIMQLL 87
G +IP P +N + + + N F GGAL R +IF++GI+PYI++SI+MQLL
Sbjct: 31 GTYIPAPGVNPAAFDN--PQGSQGATELLNTFGGGALKRFSIFAMGIVPYITASIVMQLL 88
Query: 88 S-SIMPKFENLKKEGELGKYKIAQYIRFSTLILAILQGSGISLILKS--QKNLVLDTSFY 144
I+PKF K+GE+G+ K+ R+ + LA +Q G++ + + L+++ S
Sbjct: 89 QMDIVPKFSEWAKQGEVGRRKLNNVTRYLAISLAFIQSIGMAFQFNNYLKGALIINQSIM 148
Query: 145 FHFTTVLTLVSGTIFLMWLSEQITEYGLGNGTSIIICSGIISSFPNILINL 195
+ L L +GT FL+WL +QIT++G+GNG SIII +GI+S+ P LI
Sbjct: 149 SYLLIALVLTAGTAFLIWLGDQITQFGVGNGISIIIFAGILSTLPASLIQF 199
>sp|Q7A468|SECY_STAAN Protein translocase subunit SecY OS=Staphylococcus aureus (strain
N315) GN=secY PE=1 SV=1
Length = 430
Score = 125 bits (314), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 103/171 (60%), Gaps = 5/171 (2%)
Query: 28 GAHIPIPSINYSQLTKLFEKNQNNILGMFNMFSGGALSRLTIFSLGIMPYISSSIIMQLL 87
G +IP P +N + + + N F GGAL R +IF++GI+PYI++SI+MQLL
Sbjct: 31 GTYIPAPGVNPAAFDN--PQGSQGATELLNTFGGGALKRFSIFAMGIVPYITASIVMQLL 88
Query: 88 S-SIMPKFENLKKEGELGKYKIAQYIRFSTLILAILQGSGISLILKS--QKNLVLDTSFY 144
I+PKF K+GE+G+ K+ R+ + LA +Q G++ + + L+++ S
Sbjct: 89 QMDIVPKFSEWAKQGEVGRRKLNNVTRYLAISLAFIQSIGMAFQFNNYLKGALIINQSIM 148
Query: 145 FHFTTVLTLVSGTIFLMWLSEQITEYGLGNGTSIIICSGIISSFPNILINL 195
+ L L +GT FL+WL +QIT++G+GNG SIII +GI+S+ P LI
Sbjct: 149 SYLLIALVLTAGTAFLIWLGDQITQFGVGNGISIIIFAGILSTLPASLIQF 199
>sp|Q99S39|SECY_STAAM Protein translocase subunit SecY OS=Staphylococcus aureus (strain
Mu50 / ATCC 700699) GN=secY PE=3 SV=1
Length = 430
Score = 125 bits (314), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 103/171 (60%), Gaps = 5/171 (2%)
Query: 28 GAHIPIPSINYSQLTKLFEKNQNNILGMFNMFSGGALSRLTIFSLGIMPYISSSIIMQLL 87
G +IP P +N + + + N F GGAL R +IF++GI+PYI++SI+MQLL
Sbjct: 31 GTYIPAPGVNPAAFDN--PQGSQGATELLNTFGGGALKRFSIFAMGIVPYITASIVMQLL 88
Query: 88 S-SIMPKFENLKKEGELGKYKIAQYIRFSTLILAILQGSGISLILKS--QKNLVLDTSFY 144
I+PKF K+GE+G+ K+ R+ + LA +Q G++ + + L+++ S
Sbjct: 89 QMDIVPKFSEWAKQGEVGRRKLNNVTRYLAISLAFIQSIGMAFQFNNYLKGALIINQSIM 148
Query: 145 FHFTTVLTLVSGTIFLMWLSEQITEYGLGNGTSIIICSGIISSFPNILINL 195
+ L L +GT FL+WL +QIT++G+GNG SIII +GI+S+ P LI
Sbjct: 149 SYLLIALVLTAGTAFLIWLGDQITQFGVGNGISIIIFAGILSTLPASLIQF 199
>sp|Q5HDX8|SECY_STAAC Protein translocase subunit SecY OS=Staphylococcus aureus (strain
COL) GN=secY PE=3 SV=1
Length = 430
Score = 125 bits (314), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 103/171 (60%), Gaps = 5/171 (2%)
Query: 28 GAHIPIPSINYSQLTKLFEKNQNNILGMFNMFSGGALSRLTIFSLGIMPYISSSIIMQLL 87
G +IP P +N + + + N F GGAL R +IF++GI+PYI++SI+MQLL
Sbjct: 31 GTYIPAPGVNPAAFDN--PQGSQGATELLNTFGGGALKRFSIFAMGIVPYITASIVMQLL 88
Query: 88 S-SIMPKFENLKKEGELGKYKIAQYIRFSTLILAILQGSGISLILKS--QKNLVLDTSFY 144
I+PKF K+GE+G+ K+ R+ + LA +Q G++ + + L+++ S
Sbjct: 89 QMDIVPKFSEWAKQGEVGRRKLNNVTRYLAISLAFIQSIGMAFQFNNYLKGALIINQSIM 148
Query: 145 FHFTTVLTLVSGTIFLMWLSEQITEYGLGNGTSIIICSGIISSFPNILINL 195
+ L L +GT FL+WL +QIT++G+GNG SIII +GI+S+ P LI
Sbjct: 149 SYLLIALVLTAGTAFLIWLGDQITQFGVGNGISIIIFAGILSTLPASLIQF 199
>sp|O08387|SECY_STAA8 Protein translocase subunit SecY OS=Staphylococcus aureus (strain
NCTC 8325) GN=secY PE=3 SV=2
Length = 430
Score = 125 bits (314), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 103/171 (60%), Gaps = 5/171 (2%)
Query: 28 GAHIPIPSINYSQLTKLFEKNQNNILGMFNMFSGGALSRLTIFSLGIMPYISSSIIMQLL 87
G +IP P +N + + + N F GGAL R +IF++GI+PYI++SI+MQLL
Sbjct: 31 GTYIPAPGVNPAAFDN--PQGSQGATELLNTFGGGALKRFSIFAMGIVPYITASIVMQLL 88
Query: 88 S-SIMPKFENLKKEGELGKYKIAQYIRFSTLILAILQGSGISLILKS--QKNLVLDTSFY 144
I+PKF K+GE+G+ K+ R+ + LA +Q G++ + + L+++ S
Sbjct: 89 QMDIVPKFSEWAKQGEVGRRKLNNVTRYLAISLAFIQSIGMAFQFNNYLKGALIINQSIM 148
Query: 145 FHFTTVLTLVSGTIFLMWLSEQITEYGLGNGTSIIICSGIISSFPNILINL 195
+ L L +GT FL+WL +QIT++G+GNG SIII +GI+S+ P LI
Sbjct: 149 SYLLIALVLTAGTAFLIWLGDQITQFGVGNGISIIIFAGILSTLPASLIQF 199
>sp|P28527|SECY_GUITH Protein translocase subunit SecY OS=Guillardia theta GN=secY PE=3
SV=2
Length = 420
Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 102/166 (61%), Gaps = 6/166 (3%)
Query: 28 GAHIPIPSINYSQLTKLFEKNQNNILGMFNMFSGGALSRLTIFSLGIMPYISSSIIMQLL 87
G +PIP +++ + N ++ N+FSGG + + +F+LGI+PYI++SII+QL
Sbjct: 30 GTFLPIPGVDHDAFYQ--SIISNPLVNFLNVFSGGGFASIGVFALGIVPYINASIIVQLA 87
Query: 88 SSIMPKFENLKKE-GELGKYKIAQYIRFSTLILAILQGSGISLILKSQKNLVLDTSFYFH 146
++ +P E L+KE GELG+ KI Q R+ L+ A++Q G+S ++ V + F
Sbjct: 88 TNSIPSLEKLQKEEGELGRQKIVQLTRYVALVWALIQSIGVSFWVRP---YVFNWDLNFV 144
Query: 147 FTTVLTLVSGTIFLMWLSEQITEYGLGNGTSIIICSGIISSFPNIL 192
F LTL G++ +MW SEQITE G+GNG S++I IIS P +L
Sbjct: 145 FAMSLTLTIGSMLIMWFSEQITEKGIGNGPSLLIFINIISGLPKLL 190
>sp|O51451|SECY_BORBU Protein translocase subunit SecY OS=Borrelia burgdorferi (strain
ATCC 35210 / B31 / CIP 102532 / DSM 4680) GN=secY PE=3
SV=1
Length = 434
Score = 122 bits (306), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 101/171 (59%), Gaps = 2/171 (1%)
Query: 28 GAHIPIPSINYSQLTKLFEKNQN-NILGMFNMFSGGALSRLTIFSLGIMPYISSSIIMQL 86
G+++PIP I+ L F+ + +I F+ FSGGA S +IF L I PYIS+SII+QL
Sbjct: 31 GSYLPIPGIDSVALKSYFKSQSDFSIANYFDFFSGGAFSNFSIFMLSIGPYISASIIVQL 90
Query: 87 LSSIMPKFENLKKEGELGKYKIAQYIRFSTLILAILQGSGISLILKSQKNLVLDTSFYFH 146
L P + ++ EG+ G+ K +Y ++ T++ A++QG SL K V + +
Sbjct: 91 LVYSFPSLKKMQ-EGDGGRQKTKKYTKYLTIVAAVVQGYATSLYAKGIPGAVTIPFYRYI 149
Query: 147 FTTVLTLVSGTIFLMWLSEQITEYGLGNGTSIIICSGIISSFPNILINLLK 197
F +LT+ +GT L+W EQI + G+GNGTS+II SGI+ L NL +
Sbjct: 150 FVAILTVTTGTFILLWFGEQINQRGVGNGTSLIIFSGIVVRLQAALFNLFQ 200
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.141 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,478,380
Number of Sequences: 539616
Number of extensions: 3901355
Number of successful extensions: 10793
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1149
Number of HSP's successfully gapped in prelim test: 54
Number of HSP's that attempted gapping in prelim test: 9424
Number of HSP's gapped (non-prelim): 1232
length of query: 265
length of database: 191,569,459
effective HSP length: 115
effective length of query: 150
effective length of database: 129,513,619
effective search space: 19427042850
effective search space used: 19427042850
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)