BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8863
(442 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|399018997|ref|ZP_10721147.1| lysyl-tRNA synthetase (class II) [Herbaspirillum sp. CF444]
gi|398098646|gb|EJL88928.1| lysyl-tRNA synthetase (class II) [Herbaspirillum sp. CF444]
Length = 518
Score = 620 bits (1599), Expect = e-175, Method: Compositional matrix adjust.
Identities = 282/442 (63%), Positives = 352/442 (79%), Gaps = 3/442 (0%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF LQD+SGP ++G++QLY++N++ G+ + FK+YD+GDI+GA+G+LFK
Sbjct: 80 MLKRVMGKASFATLQDSSGPRADGRMQLYVTNDVTGEAAHAAFKHYDLGDILGAEGSLFK 139
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+KV+ L+LITKSLRPLP+KF LS+QE KYR RY+DLI++E TR+ FK RT
Sbjct: 140 TKTGELSVKVTGLRLITKSLRPLPDKFHGLSDQETKYRQRYVDLIMSEETRRTFKARTAA 199
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+SSIR FMEKNDFMEVETP+LH PGGA AKPFITHHN+L+M+MFLRIAPELYLKRL++G
Sbjct: 200 MSSIRRFMEKNDFMEVETPMLHTIPGGAAAKPFITHHNALDMQMFLRIAPELYLKRLVVG 259
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GFN++FE+N+NFRNEG+SPRHNPEFTM+EFYAAY +Y WLM FTE++I++ +D GT
Sbjct: 260 GFNRVFEVNRNFRNEGVSPRHNPEFTMMEFYAAYVDYQWLMTFTEQVIRQAAIDAHGTAT 319
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQGR LD +K F++LTI AIKKY P+Y + L + FL++ LKK K +Q L
Sbjct: 320 LTYQGRELDLAKPFQRLTITGAIKKYAPEYTDEQLNDIDFLRTALKKFGVKTDQAP-LAK 378
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E++LW PTYI +YP E+SPLAR S+ ITERFELFI G EIA
Sbjct: 379 AGIGALQLALFEETAESQLWEPTYIVDYPVEVSPLARASDT-VAGITERFELFITGREIA 437
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RF+ Q+ K+ E + YYD DYI ALEYGMPPA GCGIG+DRL+
Sbjct: 438 NGFSELNDAEDQAARFQAQVAAKD-AGDEEAMYYDADYIRALEYGMPPAGGCGIGIDRLM 496
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
ML+T+S NIRDVILFPHLR E+
Sbjct: 497 MLITDSPNIRDVILFPHLRRED 518
>gi|398834201|ref|ZP_10592062.1| lysyl-tRNA synthetase (class II) [Herbaspirillum sp. YR522]
gi|398220563|gb|EJN07009.1| lysyl-tRNA synthetase (class II) [Herbaspirillum sp. YR522]
Length = 514
Score = 619 bits (1595), Expect = e-174, Method: Compositional matrix adjust.
Identities = 281/442 (63%), Positives = 350/442 (79%), Gaps = 3/442 (0%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK +F LQD SG ++G+IQLY++ ++ G+ FK+YD+GDI+GA+GTLFK
Sbjct: 76 MLKRVMGKAAFATLQDASGARADGRIQLYVTRDVTGEEAMAAFKHYDLGDILGAEGTLFK 135
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELSIKV++LKLITKSLRPLP+KF L++QE+KYR RY+DLI++E+TR FK RT
Sbjct: 136 TKTGELSIKVTALKLITKSLRPLPDKFHGLADQEMKYRQRYVDLIVSEDTRSTFKARTAA 195
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+SSIR FME N FMEVETP+LH PGGA AKPFITHHN+L+M+MF+RIAPELYLKRL++G
Sbjct: 196 MSSIRRFMETNGFMEVETPMLHPIPGGAAAKPFITHHNALDMQMFMRIAPELYLKRLVVG 255
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FE+N+NFRNEG+SPRHNPEFTM+EFYAAY +Y WLM FTE++I++ +D GT
Sbjct: 256 GFERVFEVNRNFRNEGVSPRHNPEFTMMEFYAAYVDYQWLMGFTEQVIRQAAIDAHGTAV 315
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQGR LD SK F++LTI AI KY PQYNE L + F+++ELKK K +Q L
Sbjct: 316 LTYQGRELDLSKPFDRLTITGAIVKYAPQYNEAQLADIDFVRAELKKFGVKVDQAP-LAT 374
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
+ LQL LFEET E++LWNPTYI +YP E+SPLAR S+ ITERFELFI G EIA
Sbjct: 375 VGLGALQLALFEETAESQLWNPTYIIDYPVEVSPLARASDT-VAGITERFELFITGREIA 433
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RF+ Q+ K+ E + Y+D DYI ALEYGMPPA GCGIG+DRL+
Sbjct: 434 NGFSELNDAEDQAARFQAQVAAKD-AGDEEAMYFDADYIRALEYGMPPAGGCGIGIDRLM 492
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
ML+T+S NIRDVILFPHLR E+
Sbjct: 493 MLITDSPNIRDVILFPHLRRED 514
>gi|237745577|ref|ZP_04576057.1| lysyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
gi|229376928|gb|EEO27019.1| lysyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
Length = 511
Score = 615 bits (1586), Expect = e-173, Method: Compositional matrix adjust.
Identities = 283/441 (64%), Positives = 351/441 (79%), Gaps = 7/441 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF L D SGP ++G+IQL+ISN+ IGK + FK YDIGDI+GAKGTLFK
Sbjct: 77 MLKRVMGKASFATLMDASGPRADGRIQLFISNDTIGKEAHDIFKRYDIGDILGAKGTLFK 136
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGEL+I+V++L+LITKS+RPLP+KF LS+QEI+YR RY+DLI+NE TR+ F+ RT
Sbjct: 137 TKTGELTIRVTALRLITKSVRPLPDKFHGLSDQEIRYRQRYVDLIMNEETRRTFRARTAA 196
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+SIR FM +N FMEVETP+LH PGGA AKPFIT+HN+L+M+MF+RIAPELYLKRL++G
Sbjct: 197 IASIRRFMGENGFMEVETPMLHAIPGGAAAKPFITYHNALDMQMFMRIAPELYLKRLLVG 256
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF+++FE+N+NFRNEG+SPRHNPEFTM+EFYAAY +Y WLM FTE +I++ ++D GT
Sbjct: 257 GFDRVFELNRNFRNEGVSPRHNPEFTMMEFYAAYVDYRWLMDFTETVIRQAVIDTYGTPV 316
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LDFSK F +LTI+EAI KY P Y + L + F+K+ELKK ++L
Sbjct: 317 ITYQGRELDFSKPFHRLTILEAIAKYAPHYTKEQLNDTGFMKAELKKFG-----VELLPT 371
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
+QL LFEET E KLW PTYI +YP E+SPLAR S+ +ITERFELF++G EIA
Sbjct: 372 AGIGAMQLALFEETAEAKLWEPTYIIDYPVEVSPLARASDT-RPDITERFELFMVGREIA 430
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+QS RF Q++ K+ E + YYD+DYI ALEYGMPPA GCGIG+DRL+
Sbjct: 431 NGFSELNDPEDQSARFMKQVEAKD-AGDEEAMYYDSDYIRALEYGMPPAGGCGIGIDRLV 489
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S NIRDVILFPH+R E
Sbjct: 490 MLLTDSPNIRDVILFPHMRRE 510
>gi|340788304|ref|YP_004753769.1| lysyl-tRNA synthetase [Collimonas fungivorans Ter331]
gi|340553571|gb|AEK62946.1| Lysyl-tRNA synthetase (class II) [Collimonas fungivorans Ter331]
Length = 508
Score = 614 bits (1584), Expect = e-173, Method: Compositional matrix adjust.
Identities = 283/442 (64%), Positives = 350/442 (79%), Gaps = 7/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF LQD SG ++G+IQL+I+ E IG+ Y FK+YD+GDI+GA+GTLFK
Sbjct: 74 MLKRVMGKASFATLQDASGSKADGRIQLFITKENIGEENYDSFKHYDLGDILGAEGTLFK 133
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELSIKV++L+L+TKSLRPLP+KF L++QE KYR RY+DLIINE+TR+ FK RT
Sbjct: 134 TKTGELSIKVTTLRLLTKSLRPLPDKFHGLADQETKYRQRYVDLIINEDTRRTFKVRTAA 193
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+SSIR FME+NDFMEVETP+LH PGGA AKPFITHHN+L+M+MFLRIAPELYLKRL++G
Sbjct: 194 MSSIRRFMEQNDFMEVETPMLHAIPGGAAAKPFITHHNALDMQMFLRIAPELYLKRLVVG 253
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FE+N+NFRNEG+SPRHNPEFTM+EFYAAY +Y WLM FTE++I++ +D GT
Sbjct: 254 GFERVFEVNRNFRNEGVSPRHNPEFTMMEFYAAYVDYQWLMNFTEQVIRQAAIDAHGTAT 313
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQGR LD SK F++LTI+ AI KY PQY + LQ+ F+K+ELKK K + L
Sbjct: 314 LTYQGRELDLSKPFQRLTIVGAINKYAPQYQDAQLQDAEFIKAELKKFGVKPHAHAGLG- 372
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E +LW+PTYI +YP E+SPLAR S+ ITERFELF+ G EIA
Sbjct: 373 ----ALQLALFEETAEAQLWDPTYIVDYPVEVSPLARASDT-VPGITERFELFVTGREIA 427
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RF+ Q+ K+ E + YYD DYI ALEYGMPP GCGIG+DRL+
Sbjct: 428 NGFSELNDSEDQAARFQAQVAAKD-AGDEEAMYYDADYIRALEYGMPPTGGCGIGIDRLM 486
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
ML+T+S NIRDV+LFPHLR E+
Sbjct: 487 MLITDSPNIRDVLLFPHLRRED 508
>gi|409406594|ref|ZP_11255056.1| lysyl-tRNA synthetase [Herbaspirillum sp. GW103]
gi|386435143|gb|EIJ47968.1| lysyl-tRNA synthetase [Herbaspirillum sp. GW103]
Length = 513
Score = 610 bits (1573), Expect = e-172, Method: Compositional matrix adjust.
Identities = 282/442 (63%), Positives = 346/442 (78%), Gaps = 3/442 (0%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK +F LQD SG ++G+IQLY++ ++ G+ FK+YD+GDI+GA+GTLFK
Sbjct: 75 MLKRVMGKAAFATLQDASGLRADGRIQLYVTRDVTGEEAMAAFKHYDLGDILGAEGTLFK 134
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELSIKV+ LKLITKSLRPLP+KF L++QE+KYR RY+DLI++E TR+ FK RT
Sbjct: 135 TKTGELSIKVTRLKLITKSLRPLPDKFHGLADQEMKYRQRYVDLIMSEETRRTFKARTAA 194
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+SSIR FME N FMEVETP+LH PGGA AKPFITHHN+L+M+MF+RIAPELYLKRL++G
Sbjct: 195 MSSIRRFMETNGFMEVETPMLHPIPGGAAAKPFITHHNALDMQMFMRIAPELYLKRLVVG 254
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAY +Y WLM FTE++I++ +D GT
Sbjct: 255 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYVDYQWLMGFTEQVIRQAAIDAHGTAV 314
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQGR LD SK F++LTI AI KY P Y E L + FL++ELKK K +Q L
Sbjct: 315 LTYQGRELDLSKPFDRLTITGAILKYAPNYTETQLADIDFLRTELKKFGVKTDQAP-LAG 373
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E++LWNPTYI +YP E+SPLAR S+ ITERFELFI G EIA
Sbjct: 374 AGIGALQLALFEETAESQLWNPTYIIDYPVEVSPLARASDT-VAGITERFELFITGREIA 432
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RF+ Q+ K+ E + YYD DYI ALEYGMPPA GCGIG+DRL+
Sbjct: 433 NGFSELNDAEDQAARFQAQVAAKD-AGDEEAMYYDADYIRALEYGMPPAGGCGIGIDRLM 491
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
ML+T+S NIRDVILFPHLR E+
Sbjct: 492 MLITDSPNIRDVILFPHLRRED 513
>gi|237747767|ref|ZP_04578247.1| lysyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
gi|229379129|gb|EEO29220.1| lysyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
Length = 511
Score = 610 bits (1572), Expect = e-172, Method: Compositional matrix adjust.
Identities = 282/442 (63%), Positives = 344/442 (77%), Gaps = 7/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF LQD SG +NG+IQL++SN+ GK + FK YDIGDI+GA GTLFK
Sbjct: 77 MLKRVMGKASFATLQDASGLQANGRIQLFLSNDATGKEAHDAFKRYDIGDILGATGTLFK 136
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS++VS ++LITKS+RPLP+KF LS+QE+KYR RY+DLI++E TRK FK RT
Sbjct: 137 TRTGELSVRVSEVRLITKSVRPLPDKFHGLSDQELKYRQRYVDLIMSEETRKTFKARTAA 196
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+SIR FM N FMEVETP+LH PGGA AKPFIT+HN+L+M+MF+RIAPELYLKRL++G
Sbjct: 197 IASIRRFMGDNGFMEVETPMLHAIPGGAAAKPFITYHNALDMQMFMRIAPELYLKRLLVG 256
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FE+N+NFRNEG+SPRHNPEFTM+EFYAAY +Y WLM FTE +I++ ++D GT
Sbjct: 257 GFERVFELNRNFRNEGVSPRHNPEFTMMEFYAAYVDYKWLMDFTETVIRQAVVDTYGTPV 316
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQG+ LDFSK F + TI+EAI KY P Y L + FL++ELKK K+L
Sbjct: 317 ITYQGKELDFSKPFRRFTILEAISKYAPHYTLEQLNDADFLRAELKKFG-----VKLLPT 371
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E KLW PTYI +YP E+SPLAR S+ ITERFELF++G EIA
Sbjct: 372 AGVGALQLALFEETAEAKLWEPTYIIDYPVEVSPLARASDT-REGITERFELFMVGREIA 430
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+QS RF Q++ K+ E + YYD+DYI ALEYGMPPA GCGIG+DRL+
Sbjct: 431 NGFSELNDPEDQSARFMKQVEAKD-AGDEEAMYYDSDYIRALEYGMPPAGGCGIGIDRLV 489
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S NIRDVILFPH+R E+
Sbjct: 490 MLLTDSPNIRDVILFPHMRRED 511
>gi|300312097|ref|YP_003776189.1| lysyl-tRNA synthetase [Herbaspirillum seropedicae SmR1]
gi|300074882|gb|ADJ64281.1| lysyl-tRNA synthetase (Class II) protein [Herbaspirillum
seropedicae SmR1]
Length = 513
Score = 609 bits (1571), Expect = e-172, Method: Compositional matrix adjust.
Identities = 281/442 (63%), Positives = 345/442 (78%), Gaps = 3/442 (0%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK +F LQD SG ++G+IQLYI+ ++ G+ FK+YD+GDI+GA+GTLFK
Sbjct: 75 MLKRVMGKAAFATLQDASGVRADGRIQLYITRDVTGEEAMAAFKHYDLGDILGAEGTLFK 134
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+KV+ LKLITKSLRPLP+KF L++QE+KYR RY+DLI++E TR+ FK RT
Sbjct: 135 TKTGELSVKVTKLKLITKSLRPLPDKFHGLADQEMKYRQRYVDLIMSEETRRTFKARTAA 194
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+SSIR FME + FMEVETP+LH PGGA AKPFITHHN+L+M+MF+RIAPELYLKRL++G
Sbjct: 195 MSSIRRFMETHGFMEVETPMLHPIPGGAAAKPFITHHNALDMQMFMRIAPELYLKRLVVG 254
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAY +Y WLM FTE++I++ +D GT
Sbjct: 255 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYVDYQWLMGFTEQVIRQAAIDAHGTAV 314
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQGR LD SK F++LTI AI KY P Y E L + FL++ELKK K +Q L
Sbjct: 315 LSYQGRELDLSKPFDRLTITGAILKYAPNYTEAQLADIDFLRTELKKFGVKTDQAP-LAG 373
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E++LWNPTYI +YP E+SPLAR S+ ITERFELFI G EIA
Sbjct: 374 AGIGALQLALFEETAESQLWNPTYIIDYPVEVSPLARASDT-VAGITERFELFITGREIA 432
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RF Q+ K+ E + YYD DYI ALEYGMPPA GCGIG+DRL+
Sbjct: 433 NGFSELNDAEDQAARFHAQVAAKD-AGDEEAMYYDADYIRALEYGMPPAGGCGIGIDRLM 491
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
ML+T+S NIRDVILFPHLR E+
Sbjct: 492 MLITDSPNIRDVILFPHLRRED 513
>gi|415912113|ref|ZP_11553494.1| Lysyl-tRNA synthetase [Herbaspirillum frisingense GSF30]
gi|407762149|gb|EKF71055.1| Lysyl-tRNA synthetase [Herbaspirillum frisingense GSF30]
Length = 513
Score = 607 bits (1565), Expect = e-171, Method: Compositional matrix adjust.
Identities = 280/442 (63%), Positives = 346/442 (78%), Gaps = 3/442 (0%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK +F LQD SG ++G+IQLY++ ++ G+ + FK+YD+GDI+GA+GTLFK
Sbjct: 75 MLKRVMGKAAFATLQDASGLRADGRIQLYVTRDVTGEEAMSAFKHYDLGDILGAEGTLFK 134
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+KV+ LKLITKSLRPLP+KF L++QE+KYR RY+DLI++E TR+ FK RT
Sbjct: 135 TKTGELSVKVTKLKLITKSLRPLPDKFHGLADQEMKYRQRYVDLIMSEETRRTFKARTAA 194
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+SSIR FME N FMEVETP+LH PGGA AKPFITHHN+L+M+MF+RIAPELYLKRL++G
Sbjct: 195 MSSIRRFMETNGFMEVETPMLHPIPGGAAAKPFITHHNALDMQMFMRIAPELYLKRLVVG 254
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAY +Y WLM FTE++I++ +D GT
Sbjct: 255 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYVDYQWLMGFTEQVIRQAAIDAHGTAV 314
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQGR LD SK F++LTI AI KY P Y L + FL++ELKK K +Q L
Sbjct: 315 LTYQGRELDLSKPFDRLTITGAILKYAPNYTAEQLADIEFLRTELKKFGVKTDQAP-LAG 373
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E++LWNPTYI +YP E+SPLAR S+ ITERFELFI G EIA
Sbjct: 374 AGIGALQLALFEETAESQLWNPTYIIDYPVEVSPLARASDT-VAGITERFELFITGREIA 432
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RF+ Q+ K+ E + YYD DYI ALEYGMPPA GCGIG+DRL+
Sbjct: 433 NGFSELNDAEDQAARFQAQVAAKD-AGDEEAMYYDADYIRALEYGMPPAGGCGIGIDRLM 491
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
ML+T+S NIRDVILFPHLR E+
Sbjct: 492 MLITDSPNIRDVILFPHLRRED 513
>gi|329913867|ref|ZP_08276000.1| Lysyl-tRNA synthetase (class II) [Oxalobacteraceae bacterium
IMCC9480]
gi|327545273|gb|EGF30527.1| Lysyl-tRNA synthetase (class II) [Oxalobacteraceae bacterium
IMCC9480]
Length = 510
Score = 598 bits (1543), Expect = e-168, Method: Compositional matrix adjust.
Identities = 274/442 (61%), Positives = 344/442 (77%), Gaps = 7/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF LQD SG ++G+IQLYI+N+ +G + + FK+YD+GDI+GA+G LFK
Sbjct: 76 MLKRVMGKASFATLQDASGVRADGRIQLYITNDNVGADAHDAFKHYDLGDILGAEGLLFK 135
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELSIKV++L+LITKSLRPLP+KF L++QE+KYR RY+DLI++E TR+ FK RT
Sbjct: 136 TKTGELSIKVTALRLITKSLRPLPDKFHGLADQEMKYRQRYVDLIMSEETRRTFKARTAT 195
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+SSIR FM +++FMEVETP+LH PGGA AKPFITHHN+L+M+MFLRIAPELYLKRL++G
Sbjct: 196 MSSIRRFMNEHEFMEVETPMLHTIPGGAAAKPFITHHNALDMQMFLRIAPELYLKRLVVG 255
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FE+N+NFRNEG+SPRHNPEFTM+EFYAAY +Y WLM FTE +I++ +D GT
Sbjct: 256 GFERVFEVNRNFRNEGVSPRHNPEFTMMEFYAAYVDYHWLMDFTEAVIRQAAIDAHGTAT 315
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQGR LD S+ F + TI+ AI Y PQY+ L + F+K+ELKK K L
Sbjct: 316 LTYQGRELDLSQPFRRFTILGAINHYAPQYSAEQLADADFIKTELKKFGVKPFATAGLG- 374
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E +LW PTYI +YP E+SPLAR S+ ITERFELFI G E+A
Sbjct: 375 ----ALQLALFEETAEAQLWEPTYIVDYPAEVSPLARASDT-VPGITERFELFICGRELA 429
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RF+ Q+ K+ + E + +YD DYI ALEYGMPPA GCGIG+DRL+
Sbjct: 430 NGFSELNDAEDQAARFQAQVAAKDAGDEE-AMFYDADYIRALEYGMPPAGGCGIGIDRLV 488
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
ML+T+S NIRDVILFPHLR E+
Sbjct: 489 MLITDSPNIRDVILFPHLRRED 510
>gi|186476208|ref|YP_001857678.1| lysyl-tRNA synthetase [Burkholderia phymatum STM815]
gi|238691313|sp|B2JIY1.1|SYK_BURP8 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|184192667|gb|ACC70632.1| lysyl-tRNA synthetase [Burkholderia phymatum STM815]
Length = 512
Score = 593 bits (1528), Expect = e-167, Method: Compositional matrix adjust.
Identities = 268/442 (60%), Positives = 341/442 (77%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF ++D SG +IQ +I+ +G+ Y FK +D+GDI+ AKG LF+
Sbjct: 79 MLKRVMGKASFATVRDGSG-----QIQFFITPADVGEATYEAFKKWDLGDIVAAKGVLFR 133
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++ + L+L++K+LRPLP+KF L++QE++YR RY+DLI+ + RK F RT+
Sbjct: 134 TNKGELSVRCTELRLLSKALRPLPDKFHGLADQEMRYRQRYVDLIVTDEARKTFVARTKA 193
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+SSIR FM + DFMEVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRL++G
Sbjct: 194 VSSIRKFMAEADFMEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPELYLKRLVVG 253
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE++I++ +D +G
Sbjct: 254 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYKWLMDFTEQLIRQAAVDALGNAA 313
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LD SK F +LTI +AI+KY PQY++ L + FL++ELKK Q LN
Sbjct: 314 ITYQGRELDLSKPFHRLTITQAIQKYAPQYSDAQLADGAFLRTELKKFGVDATQPAFLNA 373
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E++LW PT+I +YP E+SPLAR S+ + ITERFELFI G EIA
Sbjct: 374 -GIGALQLALFEETAESQLWEPTFIIDYPIEVSPLARASD-SVDGITERFELFITGREIA 431
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RFK Q+D K+ E + YYD DYI ALEYGMPPA GCGIG+DRL+
Sbjct: 432 NGFSELNDPEDQAARFKKQVDQKD-AGDEEAMYYDADYIRALEYGMPPAGGCGIGIDRLV 490
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S +IRDVILFPHLR E+
Sbjct: 491 MLLTDSPSIRDVILFPHLRRED 512
>gi|390568791|ref|ZP_10249083.1| lysyl-tRNA ligase [Burkholderia terrae BS001]
gi|420256136|ref|ZP_14758996.1| lysyl-tRNA synthetase (class II) [Burkholderia sp. BT03]
gi|389939140|gb|EIN00977.1| lysyl-tRNA ligase [Burkholderia terrae BS001]
gi|398043796|gb|EJL36670.1| lysyl-tRNA synthetase (class II) [Burkholderia sp. BT03]
Length = 518
Score = 590 bits (1521), Expect = e-166, Method: Compositional matrix adjust.
Identities = 267/442 (60%), Positives = 340/442 (76%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF ++D SG +IQ +I+ +G+ Y FK +D+GDI+ AKG LF+
Sbjct: 85 MLKRVMGKASFATVRDGSG-----QIQFFITPADVGETTYEAFKKWDLGDIVAAKGVLFR 139
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++ + L+L++K+LRPLP+KF L++QE++YR RY+DLI+ RK F RT+
Sbjct: 140 TNKGELSVRCTELRLLSKALRPLPDKFHGLADQEMRYRQRYVDLIVTPEARKTFVARTKA 199
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+SSIR FM +FMEVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRL++G
Sbjct: 200 VSSIRKFMADANFMEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPELYLKRLVVG 259
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE++I++ +D +G
Sbjct: 260 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYKWLMDFTEQLIRQAAVDALGDAT 319
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LD SK F +LTI +AI+K+ PQY + L + FL++ELKK NQ + L N
Sbjct: 320 ITYQGRELDLSKPFHRLTITQAIQKFAPQYTDAQLADGAFLRTELKKFGVDANQPQFL-N 378
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E++LW PT+I +YP E+SPLAR S+ + ITERFELFI G EIA
Sbjct: 379 AGIGALQLALFEETAESQLWEPTFIIDYPIEVSPLARASD-SVDGITERFELFITGREIA 437
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RFK Q+D K+ E + YYD DYI ALEYGMPPA GCGIG+DRL+
Sbjct: 438 NGFSELNDPEDQAARFKKQVDQKD-AGDEEAMYYDADYIRALEYGMPPAGGCGIGIDRLV 496
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S +IRDVILFPHLR E+
Sbjct: 497 MLLTDSPSIRDVILFPHLRRED 518
>gi|385208964|ref|ZP_10035832.1| lysyl-tRNA synthetase (class II) [Burkholderia sp. Ch1-1]
gi|385181302|gb|EIF30578.1| lysyl-tRNA synthetase (class II) [Burkholderia sp. Ch1-1]
Length = 527
Score = 588 bits (1517), Expect = e-165, Method: Compositional matrix adjust.
Identities = 271/442 (61%), Positives = 340/442 (76%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF ++D SG +IQ +I+ +G+ Y FK +D+GDI+ A+G LF+
Sbjct: 94 MLKRVMGKASFATVRDGSG-----QIQFFITPADVGQETYDAFKKWDMGDIVAARGVLFR 148
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++ + L+L++KSLRPLP+KF LS+QE+KYR RY+DLI+ TRK F RT+
Sbjct: 149 TNKGELSVRCTELRLLSKSLRPLPDKFHGLSDQEMKYRQRYVDLIVTPETRKTFVARTRA 208
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
ISSIR FM DFMEVETP+LH PGGA AKPF THHN+L+M+MFLRIAPELYLKRL++G
Sbjct: 209 ISSIRKFMADADFMEVETPMLHPIPGGAAAKPFTTHHNALDMQMFLRIAPELYLKRLVVG 268
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+S RHNPEFTMIEFYAAYT+Y WLM FTE++I++ +D +GT
Sbjct: 269 GFERVFEINRNFRNEGVSVRHNPEFTMIEFYAAYTDYRWLMDFTEQLIRQAAIDALGTAT 328
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LD +K F +LTI +AI+KY PQY L + FL++ELKK +Q + LN
Sbjct: 329 ITYQGRELDLAKPFHRLTITQAIQKYAPQYTNEQLADSAFLRTELKKFGVDASQPQFLNA 388
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E++LW PTYI +YP E+SPLAR S+ + + ITERFELFI G EIA
Sbjct: 389 -GVGALQLALFEETAESQLWEPTYIIDYPIEVSPLARASD-KVDGITERFELFITGREIA 446
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF+ Q+D K+ E + +YD DYI ALEYGMPPA GCGIG+DRL+
Sbjct: 447 NGFSELNDPEDQAARFRKQVDQKD-AGDEEAMFYDADYIRALEYGMPPAGGCGIGIDRLV 505
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S +IRDVILFPHLR E+
Sbjct: 506 MLLTDSPSIRDVILFPHLRRED 527
>gi|187924548|ref|YP_001896190.1| lysyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
gi|238689470|sp|B2SXV7.1|SYK_BURPP RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|187715742|gb|ACD16966.1| lysyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
Length = 518
Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust.
Identities = 271/442 (61%), Positives = 340/442 (76%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF ++D SG +IQ +I+ +G+ Y FK +D+GDI+ A+G LF+
Sbjct: 85 MLKRVMGKASFATVRDGSG-----QIQFFITPTDVGQETYDAFKKWDMGDIVAARGVLFR 139
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++ + L+L++KSLRPLP+KF L++QE+KYR RY+DLI+ TRK F RT+
Sbjct: 140 TNKGELSVRCTELRLLSKSLRPLPDKFHGLADQEMKYRQRYVDLIVTPETRKTFVARTKA 199
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
ISSIR FM + DFMEVETP+LH PGGA AKPF THHN+L+M+MFLRIAPELYLKRL++G
Sbjct: 200 ISSIRKFMAEADFMEVETPMLHPIPGGAAAKPFTTHHNALDMQMFLRIAPELYLKRLVVG 259
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+S RHNPEFTMIEFYAAYT+Y WLM FTE++I++ +D +GT
Sbjct: 260 GFERVFEINRNFRNEGVSVRHNPEFTMIEFYAAYTDYKWLMDFTEQLIRQAAIDALGTAT 319
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LD +K F +LTI +AI+KY PQY L + FL++ELKK +Q + L N
Sbjct: 320 ITYQGRELDLAKPFHRLTITQAIQKYAPQYTNEQLADSAFLRTELKKFGVDASQPQFL-N 378
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E++LW PTYI +YP E+SPLAR S+ + ITERFELFI G EIA
Sbjct: 379 AGVGSLQLALFEETAESQLWEPTYIIDYPIEVSPLARASD-KVAGITERFELFITGREIA 437
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RFK Q+D K E E + +YD DYI ALEYGMPPA GCGIG+DRL+
Sbjct: 438 NGFSELNDPEDQAARFKKQVDQK-EAGDEEAMFYDADYIRALEYGMPPAGGCGIGIDRLV 496
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
M+LT+S +IRDVILFPHLR E+
Sbjct: 497 MMLTDSPSIRDVILFPHLRRED 518
>gi|307729219|ref|YP_003906443.1| lysyl-tRNA synthetase [Burkholderia sp. CCGE1003]
gi|307583754|gb|ADN57152.1| lysyl-tRNA synthetase [Burkholderia sp. CCGE1003]
Length = 508
Score = 587 bits (1512), Expect = e-165, Method: Compositional matrix adjust.
Identities = 272/442 (61%), Positives = 339/442 (76%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF ++D SG +IQ +I+ +G+ Y FK +D+GDI+ A+G LF+
Sbjct: 75 MLKRVMGKASFATVRDGSG-----QIQFFITPADVGQETYDAFKKWDMGDIVAARGVLFR 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++ + L+L++KSLRPLP+KF LS+QE+KYR RY+DLI+ TRK F RT+
Sbjct: 130 TNKGELSVRCTQLRLLSKSLRPLPDKFHGLSDQEMKYRQRYVDLIVTPETRKTFVARTKA 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
ISSIR FM FMEVETP+LH PGGA AKPF THHN+L+M+MFLRIAPELYLKRL++G
Sbjct: 190 ISSIRKFMADAGFMEVETPMLHPIPGGAAAKPFTTHHNALDMQMFLRIAPELYLKRLVVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+S RHNPEFTMIEFYAAYT+Y WLM FTE++I++ +D +GT
Sbjct: 250 GFERVFEINRNFRNEGVSVRHNPEFTMIEFYAAYTDYKWLMDFTEQLIRQAAIDALGTAT 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LD SK F +LTI +AI+KY PQY + L + FL+SELKK +Q + LN
Sbjct: 310 ITYQGRELDLSKPFHRLTITQAIQKYAPQYTDEQLADSAFLRSELKKFGVDASQPQFLNA 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E++LW PTYI +YP E+SPLAR S+ + ITERFELFI G EIA
Sbjct: 370 -GVGSLQLALFEETAESQLWEPTYIIDYPVEVSPLARASD-KVEGITERFELFITGREIA 427
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RFK Q+D K+ E + +YD DYI ALEYGMPPA GCGIG+DRL+
Sbjct: 428 NGFSELNDPEDQAARFKKQVDQKD-AGDEEAMFYDADYIRALEYGMPPAGGCGIGIDRLV 486
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
M+LT+S +IRDVILFPHLR E+
Sbjct: 487 MMLTDSPSIRDVILFPHLRRED 508
>gi|91784240|ref|YP_559446.1| lysyl-tRNA synthetase [Burkholderia xenovorans LB400]
gi|122970323|sp|Q13WZ5.1|SYK_BURXL RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|91688194|gb|ABE31394.1| Lysyl-tRNA synthetase, class-2 [Burkholderia xenovorans LB400]
Length = 513
Score = 587 bits (1512), Expect = e-165, Method: Compositional matrix adjust.
Identities = 271/442 (61%), Positives = 339/442 (76%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF ++D SG +IQ +I+ +G+ Y FK +D+GDI+ A+G LF+
Sbjct: 80 MLKRVMGKASFATVRDGSG-----QIQFFITPADVGQETYDAFKKWDMGDIVAARGVLFR 134
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++ + L+L++KSLRPLP+KF LS+QE+KYR RY+DLI+ TRK F RT+
Sbjct: 135 TNKGELSVRCTELRLLSKSLRPLPDKFHGLSDQEMKYRQRYVDLIVTPETRKTFVARTKA 194
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
ISSIR FM DFMEVETP+LH PGGA AKPF THHN+L+M+MFLRIAPELYLKRL++G
Sbjct: 195 ISSIRKFMADADFMEVETPMLHPIPGGAAAKPFTTHHNALDMQMFLRIAPELYLKRLVVG 254
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+S RHNPEFTMIEFYAAYT+Y WLM FTE++I++ +D +GT
Sbjct: 255 GFERVFEINRNFRNEGVSVRHNPEFTMIEFYAAYTDYKWLMDFTEQLIRQAAIDALGTAT 314
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LD +K F +LTI +AI+KY PQY L + FL++ELKK +Q + L N
Sbjct: 315 ITYQGRELDLAKPFHRLTITQAIQKYAPQYTNEQLADSAFLRTELKKFGVDASQPQFL-N 373
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E++LW PTYI +YP E+SPLAR S+ + ITERFELFI G EIA
Sbjct: 374 AGVGALQLALFEETAESQLWEPTYIIDYPIEVSPLARASD-KVEGITERFELFITGREIA 432
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF+ Q+D K+ E + +YD DYI ALEYGMPPA GCGIG+DRL+
Sbjct: 433 NGFSELNDPEDQAARFRKQVDQKD-AGDEEAMFYDADYIRALEYGMPPAGGCGIGIDRLV 491
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S +IRDVILFPHLR E+
Sbjct: 492 MLLTDSPSIRDVILFPHLRRED 513
>gi|17545747|ref|NP_519149.1| lysyl-tRNA synthetase [Ralstonia solanacearum GMI1000]
gi|39932228|sp|Q8Y0L5.1|SYK_RALSO RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|17428041|emb|CAD14730.1| putative lysyl-trna synthetase (lysine--trna ligase) (lysrs)
protein [Ralstonia solanacearum GMI1000]
Length = 510
Score = 585 bits (1509), Expect = e-164, Method: Compositional matrix adjust.
Identities = 266/442 (60%), Positives = 343/442 (77%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ YI+ + +G+++Y FK++D+GDI+ A+G LF+
Sbjct: 77 MLKRVMGKASFATVQDGSG-----QIQFYITRDRVGEDVYAAFKHWDLGDIVAARGVLFR 131
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++V L+L++KSLRPLP+KF L++QE+KYR RY+DLI++ TR F+ RT+
Sbjct: 132 TNKGELSVQVQELRLLSKSLRPLPDKFHGLADQEMKYRQRYVDLIVSPETRNTFRARTKA 191
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+S+RH M FMEVETP+LH PGGA AKPFITHHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 192 IASLRHHMSDAGFMEVETPMLHPIPGGAAAKPFITHHNALDMQMFLRIAPELYLKRLIVG 251
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF +++EIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM +TE +I++ +D G+
Sbjct: 252 GFERVYEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDYTENLIRQAAIDATGSAA 311
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
++YQGR LD SK F +LTI +AI+KY PQY + L + FL++ELKK N + L N
Sbjct: 312 LNYQGRELDLSKPFHRLTICQAIQKYAPQYTDAQLADANFLRAELKKFKIDTNAPQFL-N 370
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL+LFEET E++LW PT+I +YP E+SPLAR S+ ITERFELFI G EIA
Sbjct: 371 AGVGTLQLVLFEETAESQLWEPTFIVDYPVEVSPLARGSDT-LPGITERFELFITGREIA 429
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF+ Q++ K+ E + +YD DYI ALEYGMPP GCGIG+DRL+
Sbjct: 430 NGFSELNDPEDQAERFRKQVEQKD-AGDEEAMFYDADYIRALEYGMPPTGGCGIGIDRLV 488
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S NIRDVILFPHLR E+
Sbjct: 489 MLLTDSPNIRDVILFPHLRRED 510
>gi|377821218|ref|YP_004977589.1| lysyl-tRNA synthetase [Burkholderia sp. YI23]
gi|357936053|gb|AET89612.1| lysyl-tRNA synthetase [Burkholderia sp. YI23]
Length = 508
Score = 585 bits (1509), Expect = e-164, Method: Compositional matrix adjust.
Identities = 266/442 (60%), Positives = 337/442 (76%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ +++ +G Y FK +D+GDII AKG LF+
Sbjct: 75 MLKRVMGKASFATVQDGSG-----QIQFFVTPADVGAETYDAFKKWDLGDIIAAKGVLFR 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++ + L+L++K+LRPLP+KF L++QE +YR RY+DLI+ +RK F RT+
Sbjct: 130 TNKGELSVRCTELRLLSKALRPLPDKFHGLADQETRYRQRYVDLIVTPESRKTFMARTKA 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
++SIR+FM K+DFMEVETP+LH PGGA AKPF THHN+L+M+MFLRIAPELYLKRL++G
Sbjct: 190 VTSIRNFMAKSDFMEVETPMLHPIPGGAAAKPFTTHHNALDMQMFLRIAPELYLKRLVVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE +I++ +D +GT
Sbjct: 250 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYQWLMDFTESLIRQAAIDALGTAT 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LD S+ F +LTI +AI+K+ PQY + L + FL++ELKK Q LN
Sbjct: 310 ITYQGRELDLSRPFHRLTINQAIQKFAPQYTDAQLSDAAFLRTELKKFGVDTTQPAFLNA 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E++LW PTYI +YP E+SPLAR S+ ITERFELFI G EIA
Sbjct: 370 -GLGSLQLALFEETAESQLWEPTYIVDYPIEVSPLARASD-SVPGITERFELFITGREIA 427
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF+ Q+D K+ E + Y+D DYI ALEYGMPP GCGIG+DRL+
Sbjct: 428 NGFSELNDPEDQAARFQKQVDQKD-AGDEEAMYFDADYIRALEYGMPPTGGCGIGIDRLV 486
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S +IRDVILFPHLR E+
Sbjct: 487 MLLTDSPSIRDVILFPHLRRED 508
>gi|167586750|ref|ZP_02379138.1| lysyl-tRNA synthetase [Burkholderia ubonensis Bu]
Length = 508
Score = 585 bits (1508), Expect = e-164, Method: Compositional matrix adjust.
Identities = 263/442 (59%), Positives = 336/442 (76%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ +++ +G Y FK +D+GDI+ A+G LF+
Sbjct: 75 MLKRVMGKASFATVQDGSG-----QIQFFVTPNDVGAETYDAFKKWDLGDIVAARGVLFR 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++ L+L++K+LRPLP+KF L++QE++YR RY+DLI+ TR F+ RT+
Sbjct: 130 TNKGELSVQCKELRLLSKALRPLPDKFHGLADQEMRYRQRYVDLIVTPETRDTFRARTKT 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+SIR FM+ DFMEVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 190 IASIRKFMDTADFMEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPELYLKRLIVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE++I++ +D +GT
Sbjct: 250 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTEQLIRQAAIDALGTAT 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LD +K F +LTI +AI+KY PQY + L + FL+SELK++ Q LN
Sbjct: 310 IQYQGRELDLAKPFHRLTITQAIQKYAPQYTDGQLSDDAFLRSELKRLGVDVTQPAFLNA 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E +LW PTYI +YP E+SPLAR S+ ITERFELF+ G EIA
Sbjct: 370 -GIGALQLALFEETAEAQLWEPTYIIDYPVEVSPLARASDT-VPGITERFELFMTGREIA 427
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RFK Q++ K+ E + ++D DYI ALEYGMPP GCGIG+DRL+
Sbjct: 428 NGFSELNDPEDQAARFKKQVEQKD-AGDEEAMFFDADYIRALEYGMPPTGGCGIGIDRLV 486
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S IRDV+LFPHLR E+
Sbjct: 487 MLLTDSPTIRDVLLFPHLRRED 508
>gi|221198423|ref|ZP_03571469.1| lysyl-tRNA synthetase [Burkholderia multivorans CGD2M]
gi|221208900|ref|ZP_03581897.1| lysyl-tRNA synthetase [Burkholderia multivorans CGD2]
gi|221214769|ref|ZP_03587738.1| lysyl-tRNA synthetase [Burkholderia multivorans CGD1]
gi|421468829|ref|ZP_15917341.1| lysine--tRNA ligase [Burkholderia multivorans ATCC BAA-247]
gi|421474660|ref|ZP_15922680.1| lysine--tRNA ligase [Burkholderia multivorans CF2]
gi|221165308|gb|EED97785.1| lysyl-tRNA synthetase [Burkholderia multivorans CGD1]
gi|221171183|gb|EEE03633.1| lysyl-tRNA synthetase [Burkholderia multivorans CGD2]
gi|221182355|gb|EEE14756.1| lysyl-tRNA synthetase [Burkholderia multivorans CGD2M]
gi|400231104|gb|EJO60823.1| lysine--tRNA ligase [Burkholderia multivorans ATCC BAA-247]
gi|400231739|gb|EJO61412.1| lysine--tRNA ligase [Burkholderia multivorans CF2]
Length = 508
Score = 585 bits (1507), Expect = e-164, Method: Compositional matrix adjust.
Identities = 264/442 (59%), Positives = 337/442 (76%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ +++ +G Y FK +D+GDI+ A+G LF+
Sbjct: 75 MLKRVMGKASFATVQDGSG-----QIQFFVTPNDVGAETYDAFKKWDLGDIVAARGVLFR 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS+K + L+L++K+LRPLP+KF LS+QE++YR RY+DLI+ TR F+ RT+
Sbjct: 130 TNKGELSVKCTELRLLSKALRPLPDKFHGLSDQEMRYRQRYVDLIVTPETRDTFRARTKT 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+SIR FM +FMEVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 190 IASIRKFMSDAEFMEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPELYLKRLIVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE++I++ +D +GT
Sbjct: 250 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTEQLIRQAAIDALGTAT 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LD +K F +LTI +AI+KY PQY + L + +L+SELK++ Q LN
Sbjct: 310 IQYQGRELDLAKPFHRLTITQAIQKYAPQYTDGQLSDDAYLRSELKRLGVDVTQPAFLNA 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E++LW PT+I +YP E+SPLAR S+ ITERFELFI G EIA
Sbjct: 370 -GIGALQLALFEETAESQLWEPTFIIDYPVEVSPLARASDT-VPGITERFELFITGREIA 427
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RFK Q++ K+ E + Y+D DYI ALEYGMPP GCGIG+DRL+
Sbjct: 428 NGFSELNDPEDQAARFKKQVEQKD-AGDEEAMYFDADYIRALEYGMPPTGGCGIGIDRLV 486
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S IRDV+LFPHLR E+
Sbjct: 487 MLLTDSPTIRDVLLFPHLRRED 508
>gi|323526608|ref|YP_004228761.1| lysyl-tRNA synthetase [Burkholderia sp. CCGE1001]
gi|323383610|gb|ADX55701.1| lysyl-tRNA synthetase [Burkholderia sp. CCGE1001]
Length = 508
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 270/442 (61%), Positives = 339/442 (76%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF ++D SG +IQ +I+ +G++ Y FK +D+GDI+ A+G LF+
Sbjct: 75 MLKRVMGKASFATVRDGSG-----QIQFFITPADVGQDTYDAFKKWDMGDIVAARGVLFR 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++ + L+L++KSLRPLP+KF LS+QE+KYR RY+DLI+ TRK F RT+
Sbjct: 130 TNKGELSVRCTELRLLSKSLRPLPDKFHGLSDQEMKYRQRYVDLIVTPETRKTFVARTKA 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
ISSIR FM FMEVETP+LH PGGA AKPF THHN+L+M+MFLRIAPELYLKRL++G
Sbjct: 190 ISSIRKFMADAGFMEVETPMLHPIPGGAAAKPFTTHHNALDMQMFLRIAPELYLKRLVVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+S RHNPEFTMIEFYAAYT+Y WLM FTE++I++ +D +GT
Sbjct: 250 GFERVFEINRNFRNEGVSVRHNPEFTMIEFYAAYTDYKWLMDFTEQLIRQAAIDALGTAT 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LD +K F +LTI +AI+KY PQY L + FL++ELKK +Q + LN
Sbjct: 310 ITYQGRELDLAKPFHRLTITQAIQKYAPQYTNEQLADSAFLRTELKKFGVDASQPQFLNA 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E++LW PTYI +YP E+SPLAR S+ + ITERFELFI G EIA
Sbjct: 370 -GVGSLQLALFEETAESQLWEPTYIIDYPVEVSPLARASD-KVAGITERFELFITGREIA 427
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RFK Q+D K+ E + +YD DYI ALEYGMPPA GCGIG+DRL+
Sbjct: 428 NGFSELNDPEDQAARFKKQVDQKD-AGDEEAMFYDADYIRALEYGMPPAGGCGIGIDRLV 486
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
M+LT+S +IRDVILFPHLR E+
Sbjct: 487 MMLTDSPSIRDVILFPHLRRED 508
>gi|407714055|ref|YP_006834620.1| lysyl-tRNA synthetase [Burkholderia phenoliruptrix BR3459a]
gi|407236239|gb|AFT86438.1| lysyl-tRNA synthetase, class II [Burkholderia phenoliruptrix
BR3459a]
Length = 508
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 270/442 (61%), Positives = 339/442 (76%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF ++D SG +IQ +I+ +G++ Y FK +D+GDI+ A+G LF+
Sbjct: 75 MLKRVMGKASFATVRDGSG-----QIQFFITPADVGQDTYDAFKKWDMGDIVAARGVLFR 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++ + L+L++KSLRPLP+KF LS+QE+KYR RY+DLI+ TRK F RT+
Sbjct: 130 TNKGELSVRCTELRLLSKSLRPLPDKFHGLSDQEMKYRQRYVDLIVTPETRKTFVARTKA 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
ISSIR FM FMEVETP+LH PGGA AKPF THHN+L+M+MFLRIAPELYLKRL++G
Sbjct: 190 ISSIRKFMADAGFMEVETPMLHPIPGGAAAKPFTTHHNALDMQMFLRIAPELYLKRLVVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+S RHNPEFTMIEFYAAYT+Y WLM FTE++I++ +D +GT
Sbjct: 250 GFERVFEINRNFRNEGVSVRHNPEFTMIEFYAAYTDYKWLMDFTEQLIRQAAIDALGTAT 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LD +K F +LTI +AI+KY PQY L + FL++ELKK +Q + LN
Sbjct: 310 ITYQGRELDLAKPFHRLTITQAIQKYAPQYTNEQLADSAFLRTELKKFGVDASQPQFLNA 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E++LW PTYI +YP E+SPLAR S+ + ITERFELFI G EIA
Sbjct: 370 -GVGSLQLALFEETAESQLWEPTYIIDYPVEVSPLARASD-KVAGITERFELFITGREIA 427
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RFK Q+D K+ E + +YD DYI ALEYGMPPA GCGIG+DRL+
Sbjct: 428 NGFSELNDPEDQAARFKKQVDQKD-AGDEEAMFYDADYIRALEYGMPPAGGCGIGIDRLV 486
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
M+LT+S +IRDVILFPHLR E+
Sbjct: 487 MMLTDSPSIRDVILFPHLRRED 508
>gi|134296299|ref|YP_001120034.1| lysyl-tRNA synthetase [Burkholderia vietnamiensis G4]
gi|387902655|ref|YP_006332994.1| lysyl-tRNA synthetase [Burkholderia sp. KJ006]
gi|166229801|sp|A4JFZ6.1|SYK_BURVG RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|134139456|gb|ABO55199.1| lysyl-tRNA synthetase [Burkholderia vietnamiensis G4]
gi|387577547|gb|AFJ86263.1| Lysyl-tRNA synthetase (class II) [Burkholderia sp. KJ006]
Length = 508
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 264/442 (59%), Positives = 337/442 (76%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ +++ +G Y FK +D+GDI+ A+G LF+
Sbjct: 75 MLKRVMGKASFATVQDGSG-----QIQFFVTPNDVGAETYDAFKKWDLGDIVAARGVLFR 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++ L+L+ K+LRPLP+KF L++QE++YR RY+DLI+ TR F+ RT+
Sbjct: 130 TNKGELSVQCKELRLLAKALRPLPDKFHGLADQEMRYRQRYVDLIVTPETRDTFRARTKT 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
ISSIR FME DFMEVETP+LH PGGA AKPFITHHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 190 ISSIRRFMENADFMEVETPMLHPIPGGAAAKPFITHHNALDMQMFLRIAPELYLKRLIVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE++I++ +D +GT
Sbjct: 250 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTEQLIRQAAIDALGTAT 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LD +K F +LTI +AI+KY PQY + L + FL++ELK++ +Q LN
Sbjct: 310 IQYQGRELDLAKPFHRLTITQAIQKYAPQYTDGQLSDDAFLRTELKRLGVDVSQPAFLNA 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E++LW PTYI +YP E+SPLAR S+ ITERFELF+ G EIA
Sbjct: 370 -GIGALQLALFEETAESQLWEPTYIIDYPVEVSPLARASDT-VPGITERFELFMTGREIA 427
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RFK Q++ K+ E + ++D DYI ALE+GMPP GCGIG+DRL+
Sbjct: 428 NGFSELNDPEDQAARFKKQVEQKD-AGDEEAMFFDADYIRALEHGMPPTGGCGIGIDRLV 486
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S IRDV+LFPHLR E+
Sbjct: 487 MLLTDSPTIRDVLLFPHLRRED 508
>gi|161524327|ref|YP_001579339.1| lysyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
gi|189350917|ref|YP_001946545.1| lysyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
gi|238687033|sp|A9AGV1.1|SYK_BURM1 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|160341756|gb|ABX14842.1| lysyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
gi|189334939|dbj|BAG44009.1| class II lysyl-tRNA synthetase [Burkholderia multivorans ATCC
17616]
Length = 508
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 264/442 (59%), Positives = 337/442 (76%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ +++ +G Y FK +D+GDI+ A+G LF+
Sbjct: 75 MLKRVMGKASFATVQDGSG-----QIQFFVTPNDVGAETYDAFKKWDLGDIVAARGVLFR 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS+K + L+L++K+LRPLP+KF LS+QE++YR RY+DLI+ TR F+ RT+
Sbjct: 130 TNKGELSVKCTELRLLSKALRPLPDKFHGLSDQEMRYRQRYVDLIVTPETRDTFRARTKT 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+SIR FM +FMEVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 190 IASIRKFMSDAEFMEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPELYLKRLIVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE++I++ +D +GT
Sbjct: 250 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTEQLIRQAAIDALGTAT 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LD +K F +LTI +AI+KY PQY + L + +L+SELK++ Q LN
Sbjct: 310 IQYQGRELDLAKPFHRLTITQAIQKYAPQYTDGQLSDNAYLRSELKRLGVDVTQPAFLNA 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E++LW PT+I +YP E+SPLAR S+ ITERFELFI G EIA
Sbjct: 370 -GIGALQLALFEETAESQLWEPTFIIDYPVEVSPLARASDT-VPGITERFELFITGREIA 427
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RFK Q++ K+ E + Y+D DYI ALEYGMPP GCGIG+DRL+
Sbjct: 428 NGFSELNDPEDQAARFKKQVEQKD-AGDEEAMYFDADYIRALEYGMPPTGGCGIGIDRLV 486
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S IRDV+LFPHLR E+
Sbjct: 487 MLLTDSPTIRDVLLFPHLRRED 508
>gi|167837159|ref|ZP_02464042.1| lysyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
gi|424903596|ref|ZP_18327109.1| lysyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
gi|390931469|gb|EIP88870.1| lysyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
Length = 508
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 263/442 (59%), Positives = 335/442 (75%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ +++ +G Y FK +D+GDI+ A+G LF+
Sbjct: 75 MLKRVMGKASFATVQDGSG-----QIQFFVTPADVGAETYDAFKKWDLGDIVAARGVLFR 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS+K + L+L+TK+LRPLP+KF L++QE +YR RY+DLI+ TR F+ RT+
Sbjct: 130 TNKGELSVKCTELRLLTKALRPLPDKFHGLADQETRYRQRYVDLIVTPETRATFRARTKA 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+SIR FM +FMEVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 190 IASIRKFMSDAEFMEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPELYLKRLIVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE++I++ +D +GT
Sbjct: 250 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTERLIRQAAVDALGTAT 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LD +K F +LTI +AI+KY P Y + L + FL+SELK++ Q LN
Sbjct: 310 IQYQGRELDLAKPFHRLTITQAIRKYAPNYTDGQLSDDAFLRSELKRLGVDVTQPAFLNA 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E +LW PT+I +YP E+SPLAR+S+ ITERFELFI G EIA
Sbjct: 370 -GIGALQLALFEETAEAQLWEPTFIIDYPIEVSPLARESDT-VTGITERFELFITGREIA 427
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RFK Q++ K+ E + ++D DYI ALEYGMPP GCGIG+DRL+
Sbjct: 428 NGFSELNDPEDQAARFKKQVEQKD-AGDEEAMFFDADYIRALEYGMPPTGGCGIGIDRLV 486
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S IRDV+LFPHLR E+
Sbjct: 487 MLLTDSPTIRDVLLFPHLRRED 508
>gi|413958363|ref|ZP_11397602.1| lysyl-tRNA ligase [Burkholderia sp. SJ98]
gi|413940943|gb|EKS72903.1| lysyl-tRNA ligase [Burkholderia sp. SJ98]
Length = 508
Score = 583 bits (1504), Expect = e-164, Method: Compositional matrix adjust.
Identities = 266/442 (60%), Positives = 336/442 (76%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ +++ +G Y FK +D+GDI+ AKG LF+
Sbjct: 75 MLKRVMGKASFATVQDGSG-----QIQFFVTPADVGAETYDAFKKWDLGDIVAAKGVLFR 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++ + L+L++K+LRPLP+KF L++QE +YR RY+DLI+ +RK F RT+
Sbjct: 130 TNKGELSVRCTELRLLSKALRPLPDKFHGLADQETRYRQRYVDLIVTPESRKTFMARTKA 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
++SIR+FM + FMEVETP+LH PGGA AKPF THHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 190 VTSIRNFMAQASFMEVETPMLHPIPGGAAAKPFTTHHNALDMQMFLRIAPELYLKRLIVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE++I++ +D +GT
Sbjct: 250 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTEQLIRQAAIDALGTAT 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LD SK F +LTI +AI+KY PQY + L + FL++ELKK Q LN
Sbjct: 310 ITYQGRELDLSKPFHRLTINQAIQKYAPQYTDAQLSDAAFLRTELKKFGVDTTQPAFLNA 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E++LW PTYI +YP E+SPLAR S+ ITERFELFI G EIA
Sbjct: 370 -GLGSLQLALFEETAESQLWEPTYIVDYPIEVSPLARASD-SVPGITERFELFITGREIA 427
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF+ Q+D K+ E + Y+D DYI ALEYGMPP GCGIG+DRL+
Sbjct: 428 NGFSELNDPEDQAARFQKQVDQKD-AGDEEAMYFDADYIRALEYGMPPTGGCGIGIDRLV 486
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S +IRDVILFPHLR E+
Sbjct: 487 MLLTDSPSIRDVILFPHLRRED 508
>gi|209519986|ref|ZP_03268765.1| lysyl-tRNA synthetase [Burkholderia sp. H160]
gi|209499583|gb|EDZ99659.1| lysyl-tRNA synthetase [Burkholderia sp. H160]
Length = 518
Score = 583 bits (1503), Expect = e-164, Method: Compositional matrix adjust.
Identities = 268/442 (60%), Positives = 340/442 (76%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF ++D SG +IQ +I+ +G+ Y FK +D+GDI+ A+G LF+
Sbjct: 85 MLKRVMGKASFATVRDGSG-----QIQFFITPADVGQETYDAFKKWDMGDIVAARGVLFR 139
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++ + L+L++KSLRPLP+KF L++QE+KYR RY+DLI+ TR+ F RT+
Sbjct: 140 TNKGELSVRCTELRLLSKSLRPLPDKFHGLADQEMKYRQRYVDLIVTPETRRTFLARTKA 199
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
ISSIR +M +FMEVETP+LH PGGA AKPF THHN+L+M+MFLRIAPELYLKRL++G
Sbjct: 200 ISSIRKYMADANFMEVETPMLHPIPGGAAAKPFSTHHNALDMQMFLRIAPELYLKRLVVG 259
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+S RHNPEFTMIEFYAAYT+Y WLM FTE++I++ +D +GT
Sbjct: 260 GFERVFEINRNFRNEGVSVRHNPEFTMIEFYAAYTDYKWLMDFTEQLIRQAAIDALGTAT 319
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LD SK F +LTI +AI+KY PQY L + FL++ELKK +Q + L N
Sbjct: 320 ITYQGRELDLSKPFHRLTITQAIQKYAPQYTNEQLADSAFLRAELKKFGVDASQPQFL-N 378
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E++LW PTYI +YP E+SPLAR S+ + + ITERFELFI G EIA
Sbjct: 379 AGVGSLQLALFEETAESQLWEPTYIIDYPIEVSPLARASD-KVDGITERFELFITGREIA 437
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RFK Q+D K+ E + +YD DYI ALEYGMPPA GCGIG+DRL+
Sbjct: 438 NGFSELNDPEDQAARFKKQVDQKD-AGDEEAMFYDADYIRALEYGMPPAGGCGIGIDRLV 496
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
M+LT+S +IRDVILFPHLR E+
Sbjct: 497 MMLTDSPSIRDVILFPHLRRED 518
>gi|386783466|pdb|4EX5|A Chain A, Crystal Structure Of Lysyl-Trna Synthetase Lysrs From
Burkholderia Thailandensis Bound To Lysine
gi|386783467|pdb|4EX5|B Chain B, Crystal Structure Of Lysyl-Trna Synthetase Lysrs From
Burkholderia Thailandensis Bound To Lysine
Length = 529
Score = 583 bits (1502), Expect = e-164, Method: Compositional matrix adjust.
Identities = 262/442 (59%), Positives = 334/442 (75%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ +++ +G Y FK +D+GDI+ A+G LF+
Sbjct: 96 MLKRVMGKASFATVQDGSG-----QIQFFVTPADVGAETYDAFKKWDLGDIVAARGVLFR 150
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS+K + L+L+ K+LRPLP+KF L++QE +YR RY+DLI+ TR F+ RT+
Sbjct: 151 TNKGELSVKCTQLRLLAKALRPLPDKFHGLADQETRYRQRYVDLIVTPETRTTFRARTKA 210
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+SIR FM DFMEVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 211 IASIRKFMGDADFMEVETPMLHPIPGGAAAKPFVTHHNALDMEMFLRIAPELYLKRLIVG 270
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE++I++ +D +GT
Sbjct: 271 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTERLIRQAAVDALGTAT 330
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LD ++ F +LTI +AI+KY P Y + L + FL+SELK++ Q LN
Sbjct: 331 IQYQGRELDLAQPFHRLTITQAIQKYAPSYTDGQLSDDAFLRSELKRLGVDVTQPAFLNA 390
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E +LW PT+I +YP E+SPLAR+S+ ITERFELFI G EIA
Sbjct: 391 -GIGALQLALFEETAEAQLWEPTFIIDYPIEVSPLARESDT-VAGITERFELFITGREIA 448
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RFK Q++ K+ E + ++D DYI ALEYGMPP GCGIG+DRL+
Sbjct: 449 NGFSELNDPEDQAARFKKQVEQKD-AGDEEAMFFDADYIRALEYGMPPTGGCGIGIDRLV 507
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S IRDV+LFPHLR E+
Sbjct: 508 MLLTDSPTIRDVLLFPHLRRED 529
>gi|300704643|ref|YP_003746246.1| lysine tRNA synthetase, constitutive [Ralstonia solanacearum
CFBP2957]
gi|299072307|emb|CBJ43640.1| lysine tRNA synthetase, constitutive [Ralstonia solanacearum
CFBP2957]
Length = 510
Score = 583 bits (1502), Expect = e-164, Method: Compositional matrix adjust.
Identities = 266/442 (60%), Positives = 341/442 (77%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ YI+ + +G+ +Y FK++D+GDII A+G LF+
Sbjct: 77 MLKRVMGKASFATVQDGSG-----QIQFYITRDRVGEEVYAAFKHWDLGDIIAARGVLFR 131
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++V L+L++KSLRPLP+KF L++QE+KYR RY+DLI++ TR F+ RT+
Sbjct: 132 TNKGELSVQVQELRLLSKSLRPLPDKFHGLADQEMKYRQRYVDLIVSPETRNTFRARTKA 191
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+S+R M FMEVETP+LH PGGA AKPFITHHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 192 IASLRRHMGDAGFMEVETPMLHPIPGGAAAKPFITHHNALDMQMFLRIAPELYLKRLIVG 251
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF +++EIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM +TE +I++ +D G+
Sbjct: 252 GFERVYEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDYTENLIRRAAIDATGSAV 311
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
++YQGR LD SK F +LTI +AI+KY PQY + L + FL++ELK N + L N
Sbjct: 312 LNYQGRELDLSKPFHRLTIAQAIQKYAPQYTDAQLADADFLRTELKTFKIDTNAPQFL-N 370
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL+LFEET E++LW PT+I +YP E+SPLAR S+ +ITERFELFI G EIA
Sbjct: 371 AGVGTLQLVLFEETAESQLWEPTFIIDYPVEVSPLARASDT-RASITERFELFITGREIA 429
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF+ Q++ K+ E + YYD DYI ALEYGMPP GCGIG+DRL+
Sbjct: 430 NGFSELNDPEDQAERFRKQVEQKD-AGDEEAMYYDADYIRALEYGMPPTGGCGIGIDRLV 488
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S NIRDVILFPHLR E+
Sbjct: 489 MLLTDSPNIRDVILFPHLRRED 510
>gi|430808891|ref|ZP_19436006.1| lysyl-tRNA ligase [Cupriavidus sp. HMR-1]
gi|429498654|gb|EKZ97158.1| lysyl-tRNA ligase [Cupriavidus sp. HMR-1]
Length = 515
Score = 583 bits (1502), Expect = e-164, Method: Compositional matrix adjust.
Identities = 271/445 (60%), Positives = 340/445 (76%), Gaps = 13/445 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ YI+ + +G+++YT FK++D+GDII A+G LF+
Sbjct: 81 MLKRVMGKASFATVQDGSG-----QIQFYITRDKVGEDVYTAFKHWDLGDIISARGELFR 135
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++V L+L++K+LRPLP+KF L++QE KYR RY+DLI++ TR F+ RTQ
Sbjct: 136 TNKGELSVQVRELRLLSKALRPLPDKFHGLADQETKYRQRYVDLIVSPETRSTFRARTQA 195
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
ISSIR M FMEVETP+LH PGGA AKPFITHHN+L+M+MF+RIAPELYLKRLI+G
Sbjct: 196 ISSIRRHMADAGFMEVETPMLHPIPGGAAAKPFITHHNALDMQMFMRIAPELYLKRLIVG 255
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE +I++ +D G+
Sbjct: 256 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTENLIRQAAIDARGSAT 315
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELK---KINPKFNQKKI 297
+ YQGR LD SK F +LTI AI+KY P+Y + L + FL++ELK KIN Q
Sbjct: 316 VTYQGRELDLSKPFHRLTICGAIQKYAPEYTDAQLADADFLRAELKNKFKINTSAPQ--- 372
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
N LQL+LFEET E +LW PTYI +YP E+SPLAR S+ + ITERFELFI G
Sbjct: 373 FLNAGLGTLQLVLFEETAEAQLWEPTYIVDYPVEVSPLARGSDTQ-PGITERFELFITGR 431
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EIANGFSELNDPE+Q+ RF+ Q++ K+ E + Y+D DYI ALEYGMPP GCGIG+D
Sbjct: 432 EIANGFSELNDPEDQAERFRKQVEQKD-AGDEEAMYFDADYIRALEYGMPPTGGCGIGID 490
Query: 418 RLIMLLTNSKNIRDVILFPHLRNEN 442
RL+MLLT+S NIRDVILFPHLR E+
Sbjct: 491 RLVMLLTDSPNIRDVILFPHLRRED 515
>gi|170702007|ref|ZP_02892927.1| lysyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
gi|170133097|gb|EDT01505.1| lysyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
Length = 508
Score = 583 bits (1502), Expect = e-164, Method: Compositional matrix adjust.
Identities = 261/442 (59%), Positives = 337/442 (76%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ +++ +G Y FK +D+GDI+ A+G LF+
Sbjct: 75 MLKRVMGKASFATVQDGSG-----QIQFFVTPNDVGAETYDAFKKWDLGDIVAARGVLFR 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++ L+L++K+LRPLP+KF L++QE++YR RY+DLI+ TR F+ RT+
Sbjct: 130 TNKGELSVQCKELRLLSKALRPLPDKFHGLADQEMRYRQRYVDLIVTPETRDTFRARTRT 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+SIR FM+ DFMEVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 190 IASIRKFMDNADFMEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPELYLKRLIVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE++I++ +D +GT
Sbjct: 250 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTEQLIRQAAIDALGTAA 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LD +K F +LTI +AI+KY PQY + L + FL++ELK+ +Q LN
Sbjct: 310 IQYQGRELDLAKPFHRLTITQAIQKYAPQYTDGQLSDDAFLRTELKRFGVDVSQPAFLNA 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E++LW PTYI +YP E+SPLAR S+ ITERFELF+ G EIA
Sbjct: 370 -GIGALQLALFEETAESQLWEPTYIIDYPVEVSPLARASDT-TPGITERFELFMTGREIA 427
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RFK Q++ K+ E + ++D DYI ALE+GMPP GCGIG+DRL+
Sbjct: 428 NGFSELNDPEDQAARFKKQVEQKD-AGDEEAMFFDADYIRALEHGMPPTGGCGIGIDRLV 486
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S IRDV+LFPHLR E+
Sbjct: 487 MLLTDSPTIRDVLLFPHLRRED 508
>gi|115352206|ref|YP_774045.1| lysyl-tRNA synthetase [Burkholderia ambifaria AMMD]
gi|172061073|ref|YP_001808725.1| lysyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
gi|122322758|sp|Q0BDR2.1|SYK_BURCM RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|238689175|sp|B1YT20.1|SYK_BURA4 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|115282194|gb|ABI87711.1| lysyl-tRNA synthetase [Burkholderia ambifaria AMMD]
gi|171993590|gb|ACB64509.1| lysyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
Length = 508
Score = 582 bits (1501), Expect = e-163, Method: Compositional matrix adjust.
Identities = 261/442 (59%), Positives = 337/442 (76%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ +++ +G Y FK +D+GDI+ A+G LF+
Sbjct: 75 MLKRVMGKASFATVQDGSG-----QIQFFVTPNDVGAETYDAFKKWDLGDIVAARGVLFR 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++ L+L++K+LRPLP+KF L++QE++YR RY+DLI+ TR F+ RT+
Sbjct: 130 TNKGELSVQCKELRLLSKALRPLPDKFHGLADQEMRYRQRYVDLIVTPETRDTFRARTRT 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+SIR FM+ DFMEVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 190 IASIRKFMDNADFMEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPELYLKRLIVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE++I++ +D +GT
Sbjct: 250 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTEQLIRQAAIDALGTAT 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LD +K F +LTI +AI+KY PQY + L + FL++ELK+ +Q LN
Sbjct: 310 IQYQGRELDLAKPFHRLTITQAIQKYAPQYTDGQLSDDAFLRTELKRFGVDVSQPAFLNA 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E++LW PTYI +YP E+SPLAR S+ ITERFELF+ G EIA
Sbjct: 370 -GIGALQLALFEETAESQLWEPTYIIDYPVEVSPLARASDT-TPGITERFELFMTGREIA 427
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RFK Q++ K+ E + ++D DYI ALE+GMPP GCGIG+DRL+
Sbjct: 428 NGFSELNDPEDQAARFKKQVEQKD-AGDEEAMFFDADYIRALEHGMPPTGGCGIGIDRLV 486
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S IRDV+LFPHLR E+
Sbjct: 487 MLLTDSPTIRDVLLFPHLRRED 508
>gi|241662570|ref|YP_002980930.1| lysyl-tRNA synthetase [Ralstonia pickettii 12D]
gi|309781153|ref|ZP_07675890.1| lysine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
gi|404393936|ref|ZP_10985740.1| lysyl-tRNA synthetase [Ralstonia sp. 5_2_56FAA]
gi|240864597|gb|ACS62258.1| lysyl-tRNA synthetase [Ralstonia pickettii 12D]
gi|308919974|gb|EFP65634.1| lysine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
gi|348615746|gb|EGY65257.1| lysyl-tRNA synthetase [Ralstonia sp. 5_2_56FAA]
Length = 514
Score = 582 bits (1501), Expect = e-163, Method: Compositional matrix adjust.
Identities = 266/442 (60%), Positives = 341/442 (77%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD S +IQ YIS + +G+++Y FK +D+GDI+ A+GTL K
Sbjct: 81 MLKRVMGKASFATVQD-----STDRIQFYISRDAVGEDVYASFKKWDLGDIVAARGTLMK 135
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+ V+ L+L++KSLRPLP + L++QE KYR RY+DLI+++ TR F+ RT+
Sbjct: 136 TKTGELSVAVTELRLLSKSLRPLPGDYYGLADQEQKYRQRYVDLIVSKETRDTFRARTKA 195
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
++S+R+FM N FMEVETP+LH PGGA AKPFITHHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 196 MASLRNFMAGNGFMEVETPMLHPIPGGAAAKPFITHHNALDMQMFLRIAPELYLKRLIVG 255
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF +++EIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE++I++ +D GT
Sbjct: 256 GFERVYEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTEQLIRQAAIDASGTAT 315
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQGR LD +K F +LTI +AI+KY PQY + L + FL++ELKK N + L N
Sbjct: 316 LTYQGRELDLAKPFHRLTICQAIQKYAPQYTDAQLADVDFLRAELKKFKIDTNAPQFL-N 374
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL+LFEET E++LW PT+I +YP E+SPLAR S+ ITERFELFI G EIA
Sbjct: 375 AGVGTLQLVLFEETAESQLWEPTFIIDYPVEVSPLARGSDT-LPGITERFELFITGREIA 433
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF+ Q++ K+ E + +YD DYI ALEYGMPP GCGIG+DRL+
Sbjct: 434 NGFSELNDPEDQAERFRKQVEQKD-AGDEEAMFYDADYIRALEYGMPPTGGCGIGIDRLV 492
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S NIRDVILFPHLR E+
Sbjct: 493 MLLTDSPNIRDVILFPHLRRED 514
>gi|83748478|ref|ZP_00945500.1| Lysyl-tRNA synthetase [Ralstonia solanacearum UW551]
gi|386334002|ref|YP_006030173.1| lysine tRNA synthetase, constitutive [Ralstonia solanacearum Po82]
gi|83724889|gb|EAP72045.1| Lysyl-tRNA synthetase [Ralstonia solanacearum UW551]
gi|334196452|gb|AEG69637.1| lysine tRNA synthetase, constitutive [Ralstonia solanacearum Po82]
Length = 510
Score = 582 bits (1501), Expect = e-163, Method: Compositional matrix adjust.
Identities = 266/442 (60%), Positives = 341/442 (77%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ YI+ + +G+ +Y FK++D+GDII A+G LF+
Sbjct: 77 MLKRVMGKASFATVQDGSG-----QIQFYITRDRVGEEVYAAFKHWDLGDIIAARGVLFR 131
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++V L+L++KSLRPLP+KF L++QE+KYR RY+DLI++ TR F+ RT+
Sbjct: 132 TNKGELSVQVQELRLLSKSLRPLPDKFHGLADQEMKYRQRYVDLIVSPETRNTFRARTKA 191
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+S+R M FMEVETP+LH PGGA AKPFITHHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 192 IASLRRHMGDAGFMEVETPMLHPIPGGAAAKPFITHHNALDMQMFLRIAPELYLKRLIVG 251
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF +++EIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM +TE +I++ +D G+
Sbjct: 252 GFERVYEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDYTENLIRQAAIDATGSAV 311
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
++YQGR LD SK F +LTI +AI+KY PQY + L + FL++ELK N + L N
Sbjct: 312 LNYQGRELDLSKPFHRLTIAQAIQKYAPQYTDAQLADADFLRTELKTFKIDTNAPQFL-N 370
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL+LFEET E++LW PT+I +YP E+SPLAR S+ +ITERFELFI G EIA
Sbjct: 371 AGVGTLQLVLFEETAESQLWEPTFIIDYPVEVSPLARASDT-RASITERFELFITGREIA 429
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF+ Q++ K+ E + YYD DYI ALEYGMPP GCGIG+DRL+
Sbjct: 430 NGFSELNDPEDQAERFRKQVEQKD-AGDEEAMYYDADYIRALEYGMPPTGGCGIGIDRLV 488
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S NIRDVILFPHLR E+
Sbjct: 489 MLLTDSPNIRDVILFPHLRRED 510
>gi|299066994|emb|CBJ38189.1| lysine tRNA synthetase, constitutive [Ralstonia solanacearum CMR15]
Length = 510
Score = 582 bits (1501), Expect = e-163, Method: Compositional matrix adjust.
Identities = 266/442 (60%), Positives = 342/442 (77%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ YI+ + +G++LY FK++D+GDII A+G LF+
Sbjct: 77 MLKRVMGKASFATVQDGSG-----QIQFYITRDRVGEDLYAAFKHWDLGDIIAARGVLFR 131
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++V L+L++KSLRPLP+KF L++QE+KYR RY+DLI++ TR F+ RT+
Sbjct: 132 TNKGELSVQVQELRLLSKSLRPLPDKFHGLADQEMKYRQRYVDLIVSPETRNTFRARTKA 191
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+S+R M FMEVETP+LH PGGA AKPFITHHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 192 IASLRRHMSDAGFMEVETPMLHPIPGGATAKPFITHHNALDMQMFLRIAPELYLKRLIVG 251
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF +++EIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM +TE +I++ +D G+
Sbjct: 252 GFERVYEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDYTENLIRQAAIDATGSAA 311
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
++YQGR LD SK F +LTI +AI+K+ PQY + L + FL++ELKK N + L N
Sbjct: 312 LNYQGRELDLSKPFHRLTICQAIQKFAPQYTDAQLADADFLRTELKKFKIDTNAPQFL-N 370
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL+LFEET E++LW PT+I +YP E+SPLAR S+ ITERFELFI G EIA
Sbjct: 371 AGVGTLQLVLFEETAESQLWEPTFIVDYPVEVSPLARGSDT-LPGITERFELFITGREIA 429
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF+ Q++ K+ E + +YD DYI ALEYGMPP GCGIG+DRL+
Sbjct: 430 NGFSELNDPEDQAERFRKQVEQKD-AGDEEAMFYDADYIRALEYGMPPTGGCGIGIDRLV 488
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S NIRDVILFPHLR E+
Sbjct: 489 MLLTDSPNIRDVILFPHLRRED 510
>gi|421747702|ref|ZP_16185386.1| lysyl-tRNA ligase [Cupriavidus necator HPC(L)]
gi|409773664|gb|EKN55418.1| lysyl-tRNA ligase [Cupriavidus necator HPC(L)]
Length = 510
Score = 582 bits (1500), Expect = e-163, Method: Compositional matrix adjust.
Identities = 266/442 (60%), Positives = 339/442 (76%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ YI+ + +G+ +Y FK++D+GDI+ A+G LF+
Sbjct: 77 MLKRVMGKASFATVQDGSG-----QIQFYITRDKVGEEVYAQFKHWDLGDIVSARGLLFR 131
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++V L+L++KSLRPLP+KF L++QE+KYR RY+DLI++ TR F+ RT+
Sbjct: 132 TNKGELSVQVQELRLLSKSLRPLPDKFHGLADQEMKYRQRYVDLIVSPETRATFRARTEA 191
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
ISS+R M + FMEVETP+LH PGGA AKPFITHHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 192 ISSLRRHMAEAGFMEVETPMLHPIPGGAAAKPFITHHNALDMQMFLRIAPELYLKRLIVG 251
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE +I+K +D G+
Sbjct: 252 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTEDLIRKAAIDARGSAT 311
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQGR LD K F +LTI +AI+KY PQY + L + FL++ELKK + + LN
Sbjct: 312 LTYQGRELDLGKPFHRLTITQAIQKYAPQYTDAQLADADFLRAELKKFGVNTSAPQFLNA 371
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL+LFEET E++LW PT+I +YP E+SPLAR S+ ITERFELFI G EIA
Sbjct: 372 -GLGTLQLVLFEETAESQLWEPTFIVDYPVEVSPLARASDT-VPGITERFELFITGREIA 429
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RF+ Q++ K+ E + Y+D DYI ALEYGMPP GCGIG+DRL+
Sbjct: 430 NGFSELNDAEDQAERFRKQVEQKD-AGDEEAMYFDADYIRALEYGMPPTGGCGIGIDRLV 488
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S NIRDVILFPHLR E+
Sbjct: 489 MLLTDSPNIRDVILFPHLRRED 510
>gi|83719490|ref|YP_442413.1| lysyl-tRNA synthetase [Burkholderia thailandensis E264]
gi|167581336|ref|ZP_02374210.1| lysyl-tRNA synthetase [Burkholderia thailandensis TXDOH]
gi|167619418|ref|ZP_02388049.1| lysyl-tRNA synthetase [Burkholderia thailandensis Bt4]
gi|257138615|ref|ZP_05586877.1| lysyl-tRNA synthetase [Burkholderia thailandensis E264]
gi|123767660|sp|Q2SXD6.1|SYK_BURTA RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|83653315|gb|ABC37378.1| lysyl-tRNA synthetase [Burkholderia thailandensis E264]
Length = 508
Score = 582 bits (1500), Expect = e-163, Method: Compositional matrix adjust.
Identities = 262/442 (59%), Positives = 334/442 (75%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ +++ +G Y FK +D+GDI+ A+G LF+
Sbjct: 75 MLKRVMGKASFATVQDGSG-----QIQFFVTPADVGAETYDAFKKWDLGDIVAARGVLFR 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS+K + L+L+ K+LRPLP+KF L++QE +YR RY+DLI+ TR F+ RT+
Sbjct: 130 TNKGELSVKCTQLRLLAKALRPLPDKFHGLADQETRYRQRYVDLIVTPETRTTFRARTKA 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+SIR FM DFMEVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 190 IASIRKFMGDADFMEVETPMLHPIPGGAAAKPFVTHHNALDMEMFLRIAPELYLKRLIVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE++I++ +D +GT
Sbjct: 250 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTERLIRQAAVDALGTAT 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LD ++ F +LTI +AI+KY P Y + L + FL+SELK++ Q LN
Sbjct: 310 IQYQGRELDLAQPFHRLTITQAIQKYAPSYTDGQLSDDAFLRSELKRLGVDVTQPAFLNA 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E +LW PT+I +YP E+SPLAR+S+ ITERFELFI G EIA
Sbjct: 370 -GIGALQLALFEETAEAQLWEPTFIIDYPIEVSPLARESDT-VAGITERFELFITGREIA 427
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RFK Q++ K+ E + ++D DYI ALEYGMPP GCGIG+DRL+
Sbjct: 428 NGFSELNDPEDQAARFKKQVEQKD-AGDEEAMFFDADYIRALEYGMPPTGGCGIGIDRLV 486
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S IRDV+LFPHLR E+
Sbjct: 487 MLLTDSPTIRDVLLFPHLRRED 508
>gi|421899278|ref|ZP_16329643.1| lysyl-trna synthetase (lysine--trna ligase) (lysrs) protein
[Ralstonia solanacearum MolK2]
gi|206590484|emb|CAQ37446.1| lysyl-trna synthetase (lysine--trna ligase) (lysrs) protein
[Ralstonia solanacearum MolK2]
Length = 490
Score = 582 bits (1500), Expect = e-163, Method: Compositional matrix adjust.
Identities = 266/442 (60%), Positives = 341/442 (77%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ YI+ + +G+ +Y FK++D+GDII A+G LF+
Sbjct: 57 MLKRVMGKASFATVQDGSG-----QIQFYITRDRVGEEVYAAFKHWDLGDIIAARGVLFR 111
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++V L+L++KSLRPLP+KF L++QE+KYR RY+DLI++ TR F+ RT+
Sbjct: 112 TNKGELSVQVQELRLLSKSLRPLPDKFHGLADQEMKYRQRYVDLIVSPETRNTFRARTKA 171
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+S+R M FMEVETP+LH PGGA AKPFITHHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 172 IASLRRHMGDAGFMEVETPMLHPIPGGAAAKPFITHHNALDMQMFLRIAPELYLKRLIVG 231
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF +++EIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM +TE +I++ +D G+
Sbjct: 232 GFERVYEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDYTENLIRQAAIDATGSAV 291
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
++YQGR LD SK F +LTI +AI+KY PQY + L + FL++ELK N + L N
Sbjct: 292 LNYQGRELDLSKPFHRLTIAQAIQKYAPQYTDAQLADADFLRTELKTFKIDTNAPQFL-N 350
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL+LFEET E++LW PT+I +YP E+SPLAR S+ +ITERFELFI G EIA
Sbjct: 351 AGVGTLQLVLFEETAESQLWEPTFIIDYPVEVSPLARASDT-RASITERFELFITGREIA 409
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF+ Q++ K+ E + YYD DYI ALEYGMPP GCGIG+DRL+
Sbjct: 410 NGFSELNDPEDQAERFRKQVEQKD-AGDEEAMYYDADYIRALEYGMPPTGGCGIGIDRLV 468
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S NIRDVILFPHLR E+
Sbjct: 469 MLLTDSPNIRDVILFPHLRRED 490
>gi|238028012|ref|YP_002912243.1| lysyl-tRNA synthetase [Burkholderia glumae BGR1]
gi|237877206|gb|ACR29539.1| Lysyl-tRNA synthetase [Burkholderia glumae BGR1]
Length = 508
Score = 582 bits (1499), Expect = e-163, Method: Compositional matrix adjust.
Identities = 262/442 (59%), Positives = 335/442 (75%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ +++ +G Y FK +D+GDI+ A+G LF+
Sbjct: 75 MLKRVMGKASFATVQDGSG-----QIQFFVTPADVGAETYDAFKKWDLGDIVAARGVLFR 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS+K S L+L++K+LRPLP+KF L++QE++YR RY+DLI+ TR F+ RT+
Sbjct: 130 TNKGELSVKCSELRLLSKALRPLPDKFHGLADQEMRYRQRYVDLIVTPETRNTFRARTKA 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+SIR FM +FMEVETP+LH PGGA AKPFITHHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 190 IASIRKFMSDAEFMEVETPMLHPIPGGAAAKPFITHHNALDMQMFLRIAPELYLKRLIVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE++I++ +D +GT
Sbjct: 250 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTEQLIRQAAIDALGTAT 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LD ++ F +LTI +AI+KY P Y + L + FL++ELK+ Q LN
Sbjct: 310 IQYQGRELDLARPFHRLTITQAIQKYAPGYGDAQLADPAFLRTELKRFGVDVGQPAFLNA 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E++LW PTYI +YP E+SPLAR S+ ITERFELF+ G EIA
Sbjct: 370 -GLGALQLALFEETAESQLWEPTYIIDYPVEVSPLARASDT-VPGITERFELFMTGREIA 427
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RFK Q++ K+ E + ++D DYI ALEYGMPP GCGIG+DRL+
Sbjct: 428 NGFSELNDPEDQAARFKKQVEQKD-AGDEEAMFFDADYIRALEYGMPPTGGCGIGIDRLV 486
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S IRDV+LFPHLR E+
Sbjct: 487 MLLTDSPTIRDVLLFPHLRRED 508
>gi|126441810|ref|YP_001059617.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 668]
gi|166229800|sp|A3NB96.1|SYK_BURP6 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|126221303|gb|ABN84809.1| lysine--tRNA ligase [Burkholderia pseudomallei 668]
Length = 508
Score = 582 bits (1499), Expect = e-163, Method: Compositional matrix adjust.
Identities = 260/442 (58%), Positives = 333/442 (75%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ +++ +G Y FK +D+GDI+ A+G LF+
Sbjct: 75 MLKRVMGKASFATVQDGSG-----QIQFFVTPADVGAETYDAFKKWDLGDIVAARGVLFR 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS+K + L+L+ K+LRPLP+KF L++QE +YR RY+DLI+ TR F+ RT+
Sbjct: 130 TNKGELSVKCTELRLLAKALRPLPDKFHGLADQETRYRQRYVDLIVTPETRATFRARTKA 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+SIR FM DFMEVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 190 IASIRKFMSDADFMEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPELYLKRLIVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE++I++ +D +GT
Sbjct: 250 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTERLIRQAAVDALGTAT 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LD +K F +LTI +AI+KY P Y + L + FL+ ELK++ Q LN
Sbjct: 310 IRYQGRELDLAKPFHRLTITQAIQKYAPNYTDGQLSDDAFLRGELKRLGVDVTQPAFLNA 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E +LW PT+I +YP E+SPLAR+S+ ITERFELF+ G EIA
Sbjct: 370 -GIGALQLALFEETAEAQLWEPTFIVDYPIEVSPLARESDT-VAGITERFELFVTGREIA 427
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF+ Q++ K+ E + ++D DYI ALEYGMPP GCGIG+DRL+
Sbjct: 428 NGFSELNDPEDQAARFRKQVEQKD-AGDEEAMFFDADYIRALEYGMPPTGGCGIGIDRLV 486
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S IRDV+LFPHLR E+
Sbjct: 487 MLLTDSPTIRDVLLFPHLRRED 508
>gi|295676933|ref|YP_003605457.1| lysyl-tRNA synthetase [Burkholderia sp. CCGE1002]
gi|295436776|gb|ADG15946.1| lysyl-tRNA synthetase [Burkholderia sp. CCGE1002]
Length = 518
Score = 581 bits (1498), Expect = e-163, Method: Compositional matrix adjust.
Identities = 268/442 (60%), Positives = 339/442 (76%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF ++D SG +IQ +I+ +G+ Y FK +D+GDI+ A+G LF+
Sbjct: 85 MLKRVMGKASFATVRDGSG-----QIQFFITPADVGQETYDAFKKWDMGDIVAARGVLFR 139
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++ + L+L++KSLRPLP+KF L++QE+KYR RY+DLI+ TR+ F RT+
Sbjct: 140 TNKGELSVRCTELRLLSKSLRPLPDKFHGLADQEMKYRQRYVDLIVTPETRRTFVARTKA 199
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
ISSIR +M +FMEVETP+LH PGGA AKPF THHN+L+M+MFLRIAPELYLKRL++G
Sbjct: 200 ISSIRKYMADANFMEVETPMLHPIPGGAAAKPFSTHHNALDMQMFLRIAPELYLKRLVVG 259
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+S RHNPEFTMIEFYAAYT+Y WLM FTE++I++ +D +GT
Sbjct: 260 GFERVFEINRNFRNEGVSVRHNPEFTMIEFYAAYTDYKWLMDFTEQLIRQAAIDALGTAT 319
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LD SK F +LTI +AI+KY PQY L + FL++ELKK +Q + L N
Sbjct: 320 ITYQGRELDLSKPFHRLTITQAIQKYAPQYTNEQLADTTFLRAELKKFGVDASQPQFL-N 378
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E++LW PTYI +YP E+SPLAR S+ + ITERFELFI G EIA
Sbjct: 379 AGVGSLQLALFEETAESQLWEPTYIIDYPIEVSPLARASD-KVAGITERFELFITGREIA 437
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RFK Q+D K+ E + +YD DYI ALEYGMPPA GCGIG+DRL+
Sbjct: 438 NGFSELNDPEDQAARFKKQVDQKD-AGDEEAMFYDADYIRALEYGMPPAGGCGIGIDRLV 496
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
M+LT+S +IRDVILFPHLR E+
Sbjct: 497 MMLTDSPSIRDVILFPHLRRED 518
>gi|171322227|ref|ZP_02911073.1| lysyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
gi|171092452|gb|EDT37798.1| lysyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
Length = 508
Score = 581 bits (1498), Expect = e-163, Method: Compositional matrix adjust.
Identities = 260/442 (58%), Positives = 337/442 (76%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ +++ +G Y FK +D+GDI+ A+G LF+
Sbjct: 75 MLKRVMGKASFATVQDGSG-----QIQFFVTPNDVGAETYDAFKKWDLGDIVAARGVLFR 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++ L+L++K+LRPLP+KF L++QE++YR RY+DLI+ TR F+ RT+
Sbjct: 130 TNKGELSVQCKELRLLSKALRPLPDKFHGLADQEMRYRQRYVDLIVTPETRDTFRARTRT 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+SIR FM+ DFMEVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 190 IASIRKFMDNADFMEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPELYLKRLIVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE++I++ +D +GT
Sbjct: 250 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTEQLIRQAAIDALGTAT 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LD ++ F +LTI +AI+KY PQY + L + FL++ELK+ +Q LN
Sbjct: 310 IQYQGRELDLAQPFHRLTITQAIQKYAPQYTDGQLSDDAFLRTELKRFGVDVSQPAFLNA 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E++LW PTYI +YP E+SPLAR S+ ITERFELF+ G EIA
Sbjct: 370 -GIGALQLALFEETAESQLWEPTYIIDYPVEVSPLARASDT-APGITERFELFMTGREIA 427
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RFK Q++ K+ E + ++D DYI ALE+GMPP GCGIG+DRL+
Sbjct: 428 NGFSELNDPEDQAARFKKQVEQKD-AGDEEAMFFDADYIRALEHGMPPTGGCGIGIDRLV 486
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S IRDV+LFPHLR E+
Sbjct: 487 MLLTDSPTIRDVLLFPHLRRED 508
>gi|94309979|ref|YP_583189.1| lysyl-tRNA synthetase [Cupriavidus metallidurans CH34]
gi|123081366|sp|Q1LPK6.1|SYK_RALME RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|93353831|gb|ABF07920.1| lysine tRNA synthetase [Cupriavidus metallidurans CH34]
Length = 515
Score = 581 bits (1498), Expect = e-163, Method: Compositional matrix adjust.
Identities = 270/445 (60%), Positives = 339/445 (76%), Gaps = 13/445 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ YI+ + +G+++Y FK++D+GDII A+G LF+
Sbjct: 81 MLKRVMGKASFATVQDGSG-----QIQFYITRDKVGEDVYAAFKHWDLGDIISARGELFR 135
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++V L+L++K+LRPLP+KF L++QE KYR RY+DLI++ TR F+ RTQ
Sbjct: 136 TNKGELSVQVRELRLLSKALRPLPDKFHGLADQETKYRQRYVDLIVSPETRSTFRARTQA 195
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
ISSIR M FMEVETP+LH PGGA AKPFITHHN+L+M+MF+RIAPELYLKRLI+G
Sbjct: 196 ISSIRRHMADAGFMEVETPMLHPIPGGAAAKPFITHHNALDMQMFMRIAPELYLKRLIVG 255
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE +I++ +D G+
Sbjct: 256 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTENLIRQAAIDARGSAT 315
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELK---KINPKFNQKKI 297
+ YQGR LD SK F +LTI AI+KY P+Y + L + FL++ELK KIN Q
Sbjct: 316 VTYQGRELDLSKPFHRLTICGAIQKYAPEYTDAQLADADFLRAELKNKFKINTSAPQ--- 372
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
N LQL+LFEET E +LW PTYI +YP E+SPLAR S+ + ITERFELFI G
Sbjct: 373 FLNAGLGTLQLVLFEETAEAQLWEPTYIVDYPVEVSPLARGSDTQ-PGITERFELFITGR 431
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EIANGFSELNDPE+Q+ RF+ Q++ K+ E + Y+D DYI ALEYGMPP GCGIG+D
Sbjct: 432 EIANGFSELNDPEDQAERFRKQVEQKD-AGDEEAMYFDADYIRALEYGMPPTGGCGIGID 490
Query: 418 RLIMLLTNSKNIRDVILFPHLRNEN 442
RL+MLLT+S NIRDVILFPHLR E+
Sbjct: 491 RLVMLLTDSPNIRDVILFPHLRRED 515
>gi|254184374|ref|ZP_04890964.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 1655]
gi|184214905|gb|EDU11948.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 1655]
Length = 508
Score = 581 bits (1498), Expect = e-163, Method: Compositional matrix adjust.
Identities = 260/442 (58%), Positives = 334/442 (75%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ +++ +G Y FK +D+GDI+ A+G LF+
Sbjct: 75 MLKRVMGKASFATVQDGSG-----QIQFFVTPADVGAETYDAFKKWDLGDIVAARGVLFR 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS+K + L+L+ K+LRPLP+KF L++QE +YR RY+DLI+ TR F+ RT+
Sbjct: 130 TNKGELSVKCTELRLLAKALRPLPDKFHGLADQETRYRQRYVDLIVTPETRATFRARTKA 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+SIR FM DFMEVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 190 IASIRKFMSDADFMEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPELYLKRLIVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE++I++ +D +GT
Sbjct: 250 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTERLIRQAAVDALGTAT 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LD +K F +LTI +AI+KY P Y + L + FL+ ELK++ Q LN
Sbjct: 310 IRYQGRELDLAKPFHRLTITQAIQKYAPNYTDGQLSDDAFLRGELKRLGVDVTQPAFLNA 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET+E +LW PT+I +YP E+SPLAR+S+ ITERFELF+ G EIA
Sbjct: 370 -GIGALQLALFEETSEAQLWEPTFIIDYPIEVSPLARESDT-VAGITERFELFVTGREIA 427
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF+ Q++ K+ E + ++D DYI ALEYGMPP GCGIG+DRL+
Sbjct: 428 NGFSELNDPEDQAARFRKQVEQKD-AGDEEAMFFDADYIRALEYGMPPTGGCGIGIDRLV 486
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S IRDV+LFPHLR E+
Sbjct: 487 MLLTDSPTIRDVLLFPHLRRED 508
>gi|254251974|ref|ZP_04945292.1| Lysyl-tRNA synthetase (class II) [Burkholderia dolosa AUO158]
gi|124894583|gb|EAY68463.1| Lysyl-tRNA synthetase (class II) [Burkholderia dolosa AUO158]
Length = 508
Score = 581 bits (1497), Expect = e-163, Method: Compositional matrix adjust.
Identities = 261/442 (59%), Positives = 336/442 (76%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ +++ +G + Y FK +D+GDI+ A+G LF+
Sbjct: 75 MLKRVMGKASFATVQDGSG-----QIQFFVTPNDVGADTYDAFKKWDLGDIVAARGVLFR 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++ L+L++KSLRPLP+KF L++QE++YR RY+DLI+ TR F+ RT+
Sbjct: 130 TNKGELSVQCKELRLLSKSLRPLPDKFHGLADQEMRYRQRYVDLIVTPETRDTFRARTKT 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+SIR FM DFMEVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 190 IASIRKFMSDADFMEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPELYLKRLIVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE++I++ +D +GT
Sbjct: 250 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTEQLIRQAAIDALGTAT 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LD ++ F +LTI +AI+KY PQY + L + +L++ELK++ Q LN
Sbjct: 310 IQYQGRELDLAQPFHRLTITQAIQKYAPQYTDRQLSDDAYLRNELKRLGVDVTQPAFLNA 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E +LW PT+I +YP E+SPLAR S+ ITERFELFI G EIA
Sbjct: 370 -GIGALQLALFEETAEAQLWEPTFIIDYPVEVSPLARASDT-VPGITERFELFITGREIA 427
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RFK Q++ K+ E + ++D DYI ALEYGMPP GCGIG+DRL+
Sbjct: 428 NGFSELNDPEDQAARFKKQVEQKD-AGDEEAMFFDADYIRALEYGMPPTGGCGIGIDRLV 486
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S IRDV+LFPHLR E+
Sbjct: 487 MLLTDSPTIRDVLLFPHLRRED 508
>gi|187927988|ref|YP_001898475.1| lysyl-tRNA synthetase [Ralstonia pickettii 12J]
gi|238691787|sp|B2U8U9.1|SYK_RALPJ RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|187724878|gb|ACD26043.1| lysyl-tRNA synthetase [Ralstonia pickettii 12J]
Length = 514
Score = 581 bits (1497), Expect = e-163, Method: Compositional matrix adjust.
Identities = 265/442 (59%), Positives = 341/442 (77%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD + +IQ YIS + +G+++Y FK +D+GDI+ A+GTL K
Sbjct: 81 MLKRVMGKASFATVQD-----ATDRIQFYISRDAVGEDVYASFKKWDLGDIVAARGTLMK 135
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+ V+ L+L++KSLRPLP + L++QE KYR RY+DLI+++ TR F+ RT+
Sbjct: 136 TKTGELSVAVTELRLLSKSLRPLPGDYYGLADQEQKYRQRYVDLIVSKETRDTFRARTKA 195
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
++S+R+FM N FMEVETP+LH PGGA AKPFITHHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 196 MASLRNFMAGNGFMEVETPMLHPIPGGAAAKPFITHHNALDMQMFLRIAPELYLKRLIVG 255
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF +++EIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE++I++ +D GT
Sbjct: 256 GFERVYEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTEQLIRQAAIDASGTAT 315
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQGR LD +K F +LTI +AI+KY PQY + L + FL++ELKK N + L N
Sbjct: 316 LTYQGRELDLAKPFHRLTICQAIQKYAPQYTDAQLADVDFLRAELKKFKIDTNAPQFL-N 374
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL+LFEET E++LW PT+I +YP E+SPLAR S+ ITERFELFI G EIA
Sbjct: 375 AGVGTLQLVLFEETAESQLWEPTFIIDYPVEVSPLARGSDT-LPGITERFELFITGREIA 433
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF+ Q++ K+ E + +YD DYI ALEYGMPP GCGIG+DRL+
Sbjct: 434 NGFSELNDPEDQAERFRKQVEQKD-AGDEEAMFYDADYIRALEYGMPPTGGCGIGIDRLV 492
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S NIRDVILFPHLR E+
Sbjct: 493 MLLTDSPNIRDVILFPHLRRED 514
>gi|76811249|ref|YP_334110.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
gi|167895042|ref|ZP_02482444.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 7894]
gi|167919677|ref|ZP_02506768.1| lysyl-tRNA synthetase [Burkholderia pseudomallei BCC215]
gi|254260252|ref|ZP_04951306.1| lysine--tRNA ligase [Burkholderia pseudomallei 1710a]
gi|254297039|ref|ZP_04964492.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 406e]
gi|418544761|ref|ZP_13110033.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 1258a]
gi|418551754|ref|ZP_13116659.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 1258b]
gi|123598607|sp|Q3JQP3.1|SYK_BURP1 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|76580702|gb|ABA50177.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
gi|157807694|gb|EDO84864.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 406e]
gi|254218941|gb|EET08325.1| lysine--tRNA ligase [Burkholderia pseudomallei 1710a]
gi|385346827|gb|EIF53500.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 1258b]
gi|385348055|gb|EIF54694.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 1258a]
Length = 508
Score = 581 bits (1497), Expect = e-163, Method: Compositional matrix adjust.
Identities = 260/442 (58%), Positives = 333/442 (75%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ +++ +G Y FK +D+GDI+ A+G LF+
Sbjct: 75 MLKRVMGKASFATVQDGSG-----QIQFFVTPADVGAETYDAFKKWDLGDIVAARGVLFR 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS+K + L+L+ K+LRPLP+KF L++QE +YR RY+DLI+ TR F+ RT+
Sbjct: 130 TNKGELSVKCTELRLLAKALRPLPDKFHGLADQETRYRQRYVDLIVTPETRATFRARTKA 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+SIR FM DFMEVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 190 IASIRKFMSDADFMEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPELYLKRLIVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE++I++ +D +GT
Sbjct: 250 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTERLIRQAAVDALGTAT 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LD +K F +LTI +AI+KY P Y + L + FL+ ELK++ Q LN
Sbjct: 310 IRYQGRELDLAKPFRRLTITQAIQKYAPNYTDGQLSDDAFLRGELKRLGVDVTQPAFLNA 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E +LW PT+I +YP E+SPLAR+S+ ITERFELF+ G EIA
Sbjct: 370 -GIGALQLALFEETAEAQLWEPTFIIDYPIEVSPLARESDT-VAGITERFELFVTGREIA 427
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF+ Q++ K+ E + ++D DYI ALEYGMPP GCGIG+DRL+
Sbjct: 428 NGFSELNDPEDQAARFRKQVEQKD-AGDEEAMFFDADYIRALEYGMPPTGGCGIGIDRLV 486
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S IRDV+LFPHLR E+
Sbjct: 487 MLLTDSPTIRDVLLFPHLRRED 508
>gi|374368803|ref|ZP_09626846.1| lysyl-tRNA synthetase [Cupriavidus basilensis OR16]
gi|373099654|gb|EHP40732.1| lysyl-tRNA synthetase [Cupriavidus basilensis OR16]
Length = 512
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 268/442 (60%), Positives = 336/442 (76%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ YIS + IG+++Y FK +D+GDI+ A+GTL K
Sbjct: 79 MLKRVMGKASFATVQDGSG-----RIQFYISRDAIGEDVYAAFKKWDLGDIVAARGTLMK 133
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+ VS L+L++KSLRPLP + L++QE KYR RY+DLI++ TR F+ RT
Sbjct: 134 TKTGELSVAVSELRLLSKSLRPLPGDYYGLADQEQKYRQRYVDLIVSPETRATFRARTNA 193
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
ISS+R M NDFMEVETP+LH PGGA AKPFITHHN+L+M+MFLRIAPELYLKRL++G
Sbjct: 194 ISSLRRHMANNDFMEVETPMLHPIPGGATAKPFITHHNALDMQMFLRIAPELYLKRLVVG 253
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE +I++ +D G+
Sbjct: 254 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTEDLIRQAAIDARGSAV 313
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQ R LD SK F +LTI +AI+K+ PQY + L + FL++ELKK + L N
Sbjct: 314 LTYQDRELDLSKPFHRLTITQAIQKFAPQYTDAQLADTEFLRAELKKFGINTGAPQFL-N 372
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL+LFEET E++LW PT+I +YP E+SPLAR S+ + ITERFELFI G EIA
Sbjct: 373 AGLGTLQLVLFEETAESQLWEPTFIIDYPVEVSPLARASDTQ-PGITERFELFITGREIA 431
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RF+ Q+D K+ E + Y+D DYI ALEYGMPP GCGIG+DRL+
Sbjct: 432 NGFSELNDAEDQAERFRKQVDQKD-AGDEEAMYFDADYIRALEYGMPPTGGCGIGIDRLV 490
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S NIRDVILFPHLR E+
Sbjct: 491 MLLTDSPNIRDVILFPHLRRED 512
>gi|312796707|ref|YP_004029629.1| lysyl-tRNA synthetase [Burkholderia rhizoxinica HKI 454]
gi|312168482|emb|CBW75485.1| Lysyl-tRNA synthetase (EC 6.1.1.6) [Burkholderia rhizoxinica HKI
454]
Length = 510
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 262/442 (59%), Positives = 334/442 (75%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR+MGK SF +QD G+IQ +I+ +G + Y FK +D+GDII A G LF+
Sbjct: 77 MLKRIMGKASFATVQD-----GTGQIQFFITPADVGADTYDAFKKWDLGDIIAAHGVLFR 131
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++ + L+L++K++RPLP+KF LS+QE +YR RY+DLI+ R+ F+ RT+
Sbjct: 132 TNKGELSVRCTGLRLLSKAIRPLPDKFHGLSDQETRYRQRYVDLIVTPEARQTFQARTRT 191
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+SIRHFM DFMEVETP+LH PGGA AKPFITHHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 192 IASIRHFMTNADFMEVETPMLHPIPGGAAAKPFITHHNALDMQMFLRIAPELYLKRLIVG 251
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G N++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE++I++ +D GTT
Sbjct: 252 GLNRVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTEQLIRQAALDARGTTA 311
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQGR LD K F +LTI AI+KY PQY++ L ++ +L++EL ++ L N
Sbjct: 312 VHYQGRELDLGKPFHRLTITGAIQKYAPQYSDAQLADRDWLRAELHRLGVD-THAAPLRN 370
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E +LW PTYI +YP E+SPLAR S+ ITERFELF+ G EIA
Sbjct: 371 AGVGALQLALFEETAEAQLWEPTYIVDYPVEVSPLARASDT-VPGITERFELFMTGREIA 429
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF+ Q+ K+ + E + YYD DYI ALEYGMPP GCGIG+DRL+
Sbjct: 430 NGFSELNDPEDQAARFRQQVAQKDAGDEE-AMYYDADYIRALEYGMPPTGGCGIGIDRLV 488
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S +IRDVILFPHLR E+
Sbjct: 489 MLLTDSPSIRDVILFPHLRRED 510
>gi|170694747|ref|ZP_02885898.1| lysyl-tRNA synthetase [Burkholderia graminis C4D1M]
gi|170140378|gb|EDT08555.1| lysyl-tRNA synthetase [Burkholderia graminis C4D1M]
Length = 508
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 267/442 (60%), Positives = 338/442 (76%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF ++D SG +IQ +I+ +G+ Y FK +D+GDI+ A+G LF+
Sbjct: 75 MLKRVMGKASFATVRDGSG-----QIQFFITPADVGQETYDAFKKWDMGDIVAARGVLFR 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++ + L+L++KSLRPLP+KF LS+QE+KYR RY+DLI+ TRK F RT+
Sbjct: 130 TNKGELSVRCTELRLLSKSLRPLPDKFHGLSDQEMKYRQRYVDLIVTPETRKTFVARTRA 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
ISSIR FM FMEVETP+LH PGGA AKPF THHN+L+M+MFLRIAPELYLKRL++G
Sbjct: 190 ISSIRKFMADAGFMEVETPMLHPIPGGAAAKPFTTHHNALDMQMFLRIAPELYLKRLVVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FE+N+NFRNEG+S RHNPEFTMIEFYAAYT+Y W+M FTE++I++ +D +GT
Sbjct: 250 GFERVFEVNRNFRNEGVSVRHNPEFTMIEFYAAYTDYKWVMDFTEQLIRQAAIDALGTAT 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LD +K F +LTI +AI+KY PQY L + FL++ELKK +Q + LN
Sbjct: 310 ITYQGRELDLAKPFHRLTITQAIQKYAPQYTNEQLADSAFLRTELKKFGVDASQPQFLNA 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E++LW PTYI +YP E+SPLAR S+ + ITERFELFI G EIA
Sbjct: 370 -GVGSLQLALFEETAESQLWEPTYIIDYPLEVSPLARASD-KVEGITERFELFITGREIA 427
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF+ Q+D K+ E + +YD DYI ALEYGMPPA GCGIG+DRL+
Sbjct: 428 NGFSELNDPEDQAARFRKQVDQKD-AGDEEAMFYDADYIRALEYGMPPAGGCGIGIDRLV 486
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
M+LT+S +IRDVILFPHLR E+
Sbjct: 487 MMLTDSPSIRDVILFPHLRRED 508
>gi|421888792|ref|ZP_16319872.1| lysine tRNA synthetase, constitutive [Ralstonia solanacearum K60-1]
gi|378965856|emb|CCF96620.1| lysine tRNA synthetase, constitutive [Ralstonia solanacearum K60-1]
Length = 510
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 265/442 (59%), Positives = 340/442 (76%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ YI+ + +G+ +Y FK++D+GDII A+G LF+
Sbjct: 77 MLKRVMGKASFATVQDGSG-----QIQFYITRDRVGEEVYAAFKHWDLGDIIAARGVLFR 131
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++V L+L++KSLRPLP+KF L++QE+KYR RY+DLI++ TR F+ RT+
Sbjct: 132 TNKGELSVQVQELRLLSKSLRPLPDKFHGLADQEMKYRQRYVDLIVSPETRNTFRARTKA 191
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+S+R M FMEVETP+LH PGGA AKPFITHHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 192 IASLRRHMGDAGFMEVETPMLHPIPGGAAAKPFITHHNALDMQMFLRIAPELYLKRLIVG 251
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF +++EIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM +TE +I++ +D G+
Sbjct: 252 GFERVYEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDYTENLIRQAAIDATGSAV 311
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
++YQGR LD SK F +LTI +AI+KY P Y + L + FL++ELK N + L N
Sbjct: 312 LNYQGRELDLSKPFHRLTIAQAIQKYAPHYTDAQLADADFLRTELKTFKIDTNAPQFL-N 370
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL+LFEET E++LW PT+I +YP E+SPLAR S+ +ITERFELFI G EIA
Sbjct: 371 AGVGTLQLVLFEETAESQLWEPTFIIDYPVEVSPLARASDT-RASITERFELFITGREIA 429
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF+ Q++ K+ E + YYD DYI ALEYGMPP GCGIG+DRL+
Sbjct: 430 NGFSELNDPEDQAERFRKQVEQKD-AGDEEAMYYDADYIRALEYGMPPTGGCGIGIDRLV 488
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S NIRDVILFPHLR E+
Sbjct: 489 MLLTDSPNIRDVILFPHLRRED 510
>gi|53723795|ref|YP_103320.1| lysyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
gi|67642992|ref|ZP_00441742.1| lysine--tRNA ligase [Burkholderia mallei GB8 horse 4]
gi|121601586|ref|YP_993519.1| lysyl-tRNA synthetase [Burkholderia mallei SAVP1]
gi|124385926|ref|YP_001029052.1| lysyl-tRNA synthetase [Burkholderia mallei NCTC 10229]
gi|126449902|ref|YP_001081027.1| lysyl-tRNA synthetase [Burkholderia mallei NCTC 10247]
gi|126453655|ref|YP_001066898.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
gi|134277392|ref|ZP_01764107.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 305]
gi|167000660|ref|ZP_02266471.1| lysine--tRNA ligase [Burkholderia mallei PRL-20]
gi|167846463|ref|ZP_02471971.1| lysyl-tRNA synthetase [Burkholderia pseudomallei B7210]
gi|217420502|ref|ZP_03452007.1| lysine--tRNA ligase [Burkholderia pseudomallei 576]
gi|226195488|ref|ZP_03791076.1| lysine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
gi|242314267|ref|ZP_04813283.1| lysine--tRNA ligase [Burkholderia pseudomallei 1106b]
gi|254178151|ref|ZP_04884806.1| lysyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
gi|254191407|ref|ZP_04897911.1| lysyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
gi|254195944|ref|ZP_04902370.1| lysyl-tRNA synthetase [Burkholderia pseudomallei S13]
gi|254200277|ref|ZP_04906643.1| lysyl-tRNA synthetase [Burkholderia mallei FMH]
gi|254209353|ref|ZP_04915699.1| lysyl-tRNA synthetase [Burkholderia mallei JHU]
gi|254357975|ref|ZP_04974248.1| lysyl-tRNA synthetase [Burkholderia mallei 2002721280]
gi|386861148|ref|YP_006274097.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 1026b]
gi|403519324|ref|YP_006653458.1| lysyl-tRNA synthetase [Burkholderia pseudomallei BPC006]
gi|418382577|ref|ZP_12966525.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 354a]
gi|418533582|ref|ZP_13099444.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 1026a]
gi|418552909|ref|ZP_13117752.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 354e]
gi|81604733|sp|Q62IZ9.1|SYK_BURMA RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|166229796|sp|A3ML91.1|SYK_BURM7 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|166229797|sp|A2SAT3.1|SYK_BURM9 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|166229798|sp|A1V5L6.1|SYK_BURMS RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|166229799|sp|A3NX27.1|SYK_BURP0 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|52427218|gb|AAU47811.1| lysyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
gi|121230396|gb|ABM52914.1| lysyl-tRNA synthetase [Burkholderia mallei SAVP1]
gi|124293946|gb|ABN03215.1| lysine--tRNA ligase [Burkholderia mallei NCTC 10229]
gi|126227297|gb|ABN90837.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
gi|126242772|gb|ABO05865.1| lysine--tRNA ligase [Burkholderia mallei NCTC 10247]
gi|134251042|gb|EBA51121.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 305]
gi|147749873|gb|EDK56947.1| lysyl-tRNA synthetase [Burkholderia mallei FMH]
gi|147750126|gb|EDK57197.1| lysyl-tRNA synthetase [Burkholderia mallei JHU]
gi|148027102|gb|EDK85123.1| lysyl-tRNA synthetase [Burkholderia mallei 2002721280]
gi|157939079|gb|EDO94749.1| lysyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
gi|160699190|gb|EDP89160.1| lysyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
gi|169652689|gb|EDS85382.1| lysyl-tRNA synthetase [Burkholderia pseudomallei S13]
gi|217395914|gb|EEC35931.1| lysine--tRNA ligase [Burkholderia pseudomallei 576]
gi|225932448|gb|EEH28447.1| lysine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
gi|238524227|gb|EEP87661.1| lysine--tRNA ligase [Burkholderia mallei GB8 horse 4]
gi|242137506|gb|EES23908.1| lysine--tRNA ligase [Burkholderia pseudomallei 1106b]
gi|243063467|gb|EES45653.1| lysine--tRNA ligase [Burkholderia mallei PRL-20]
gi|385360865|gb|EIF66769.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 1026a]
gi|385372318|gb|EIF77436.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 354e]
gi|385377217|gb|EIF81823.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 354a]
gi|385658276|gb|AFI65699.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 1026b]
gi|403074967|gb|AFR16547.1| lysyl-tRNA synthetase [Burkholderia pseudomallei BPC006]
Length = 508
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 260/442 (58%), Positives = 333/442 (75%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ +++ +G Y FK +D+GDI+ A+G LF+
Sbjct: 75 MLKRVMGKASFATVQDGSG-----QIQFFVTPADVGAETYDAFKKWDLGDIVAARGVLFR 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS+K + L+L+ K+LRPLP+KF L++QE +YR RY+DLI+ TR F+ RT+
Sbjct: 130 TNKGELSVKCTELRLLAKALRPLPDKFHGLADQETRYRQRYVDLIVTPETRATFRARTKA 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+SIR FM DFMEVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 190 IASIRKFMSDADFMEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPELYLKRLIVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE++I++ +D +GT
Sbjct: 250 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTERLIRQAAVDALGTAT 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LD +K F +LTI +AI+KY P Y + L + FL+ ELK++ Q LN
Sbjct: 310 IRYQGRELDLAKPFHRLTITQAIQKYAPNYTDGQLSDDAFLRGELKRLGVDVTQPAFLNA 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E +LW PT+I +YP E+SPLAR+S+ ITERFELF+ G EIA
Sbjct: 370 -GIGALQLALFEETAEAQLWEPTFIIDYPIEVSPLARESDT-VAGITERFELFVTGREIA 427
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF+ Q++ K+ E + ++D DYI ALEYGMPP GCGIG+DRL+
Sbjct: 428 NGFSELNDPEDQAARFRKQVEQKD-AGDEEAMFFDADYIRALEYGMPPTGGCGIGIDRLV 486
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S IRDV+LFPHLR E+
Sbjct: 487 MLLTDSPTIRDVLLFPHLRRED 508
>gi|53719891|ref|YP_108877.1| lysyl-tRNA synthetase [Burkholderia pseudomallei K96243]
gi|81379446|sp|Q63SN9.1|SYK_BURPS RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|52210305|emb|CAH36284.1| lysyl-tRNA synthetase [Burkholderia pseudomallei K96243]
Length = 508
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 260/442 (58%), Positives = 333/442 (75%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ +++ +G Y FK +D+GDI+ A+G LF+
Sbjct: 75 MLKRVMGKASFATVQDGSG-----QIQFFVTPADVGAETYDAFKKWDLGDIVAARGVLFR 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS+K + L+L+ K+LRPLP+KF L++QE +YR RY+DLI+ TR F+ RT+
Sbjct: 130 TNKGELSVKCTELRLLAKALRPLPDKFHGLADQETRYRQRYVDLIVTPETRATFRARTKA 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+SIR FM DFMEVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 190 IASIRKFMSDADFMEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPELYLKRLIVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE++I++ +D +GT
Sbjct: 250 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTERLIRQAAVDALGTAT 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LD +K F +LTI +AI+KY P Y + L + FL+ ELK++ Q LN
Sbjct: 310 IRYQGRELDLAKPFHRLTITQAIQKYAPNYTDGQLSDDAFLRGELKRLGVDVTQPAFLNA 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E +LW PT+I +YP E+SPLAR+S+ ITERFELF+ G EIA
Sbjct: 370 -GIGALQLALFEETAEAQLWEPTFIIDYPIEVSPLARESDT-VAGITERFELFVTGREIA 427
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF+ Q++ K+ E + ++D DYI ALEYGMPP GCGIG+DRL+
Sbjct: 428 NGFSELNDPEDQAARFRKQVEQKD-AGDEEAMFFDADYIRALEYGMPPTGGCGIGIDRLV 486
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S IRDV+LFPHLR E+
Sbjct: 487 MLLTDSPTIRDVLLFPHLRRED 508
>gi|402566095|ref|YP_006615440.1| lysyl-tRNA synthetase [Burkholderia cepacia GG4]
gi|402247292|gb|AFQ47746.1| lysyl-tRNA synthetase [Burkholderia cepacia GG4]
Length = 508
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 261/442 (59%), Positives = 338/442 (76%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ +++ +G Y FK +D+GDI+ A+G LF+
Sbjct: 75 MLKRVMGKASFATVQDGSG-----QIQFFVTPNDVGAETYDAFKKWDLGDIVAARGVLFR 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++ L+L++K+LRPLP+KF L++QE++YR RY+DLI+ TR F+ RT+
Sbjct: 130 TNKGELSVQCKELRLLSKALRPLPDKFHGLADQEMRYRQRYVDLIVTPETRDTFRARTKT 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+SIR FM+ +FMEVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 190 IASIRKFMDNAEFMEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPELYLKRLIVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE++I++ +D +GT
Sbjct: 250 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTEQLIRQAAIDALGTAT 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LD +K F +LTI +AI+KY PQY + L + FL+SELK++ +Q LN
Sbjct: 310 IQYQGRELDLAKPFHRLTITQAIQKYAPQYTDGQLSDDAFLRSELKRLGVDVSQPAFLNA 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E++LW PTYI +YP E+SPLAR S+ ITERFELF+ G EIA
Sbjct: 370 -GIGALQLALFEETAESQLWEPTYIIDYPVEVSPLARASDT-VPGITERFELFMTGREIA 427
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RFK Q++ K+ E + ++D DYI ALE+GMPP GCGIG+DRL+
Sbjct: 428 NGFSELNDPEDQAARFKKQVEQKD-AGDEEAMFFDADYIRALEHGMPPTGGCGIGIDRLV 486
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S IRDV+LFPHLR E+
Sbjct: 487 MLLTDSPTIRDVLLFPHLRRED 508
>gi|416936027|ref|ZP_11934033.1| lysyl-tRNA synthetase [Burkholderia sp. TJI49]
gi|325525096|gb|EGD02989.1| lysyl-tRNA synthetase [Burkholderia sp. TJI49]
Length = 508
Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust.
Identities = 260/442 (58%), Positives = 336/442 (76%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ +++ +G Y FK +D+GDI+ A+G LF+
Sbjct: 75 MLKRVMGKASFATVQDGSG-----QIQFFVTPNDVGAETYDAFKKWDLGDIVAARGVLFR 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS+K + L+L++K+LRPLP+KF L++QE++YR RY+DLI+ TR F+ RT+
Sbjct: 130 TNKGELSVKCTELRLLSKALRPLPDKFHGLADQEMRYRQRYVDLIVTPETRDTFRARTKA 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+SIR FM DFMEVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 190 IASIRKFMGDADFMEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPELYLKRLIVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE++I++ +D +GT
Sbjct: 250 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTEQLIRQTAIDALGTAT 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LD +K F +LTI +AI+K+ PQY + L + +L+SELK++ Q LN
Sbjct: 310 IQYQGRELDLAKPFHRLTITQAIQKFAPQYTDGQLSDDAYLRSELKRLGVDVTQPAFLNA 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E +LW PT+I +YP E+SPLAR S+ ITERFELF+ G EIA
Sbjct: 370 -GIGALQLALFEETAEAQLWEPTFIIDYPVEVSPLARASDT-VPGITERFELFMTGREIA 427
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF+ Q++ K+ E + ++D DYI ALEYGMPP GCGIG+DRL+
Sbjct: 428 NGFSELNDPEDQAARFRKQVEQKD-AGDEEAMFFDADYIRALEYGMPPTGGCGIGIDRLV 486
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S IRDV+LFPHLR E+
Sbjct: 487 MLLTDSPTIRDVLLFPHLRRED 508
>gi|73540772|ref|YP_295292.1| lysyl-tRNA synthetase [Ralstonia eutropha JMP134]
gi|123760232|sp|Q473I5.1|SYK_CUPPJ RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|72118185|gb|AAZ60448.1| Lysyl-tRNA synthetase, class-2 [Ralstonia eutropha JMP134]
Length = 516
Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust.
Identities = 266/442 (60%), Positives = 340/442 (76%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ YI+ + +G+++Y FK++D+GDII A+G LF+
Sbjct: 83 MLKRVMGKASFATVQDGSG-----QIQFYITRDKVGEDVYAAFKHWDLGDIISARGVLFR 137
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++V L+L++KSLRPLP+KF L++QE+KYR RY+DLI++ TR F+ RT+
Sbjct: 138 TNKGELSVQVQELRLLSKSLRPLPDKFHGLADQEMKYRQRYVDLIVSPETRNTFRARTKA 197
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+SS+R M FMEVETP+LH PGGA AKPFITHHN+L+M+MF+RIAPELYLKRLI+G
Sbjct: 198 MSSLRRHMSDAGFMEVETPMLHPIPGGAAAKPFITHHNALDMQMFMRIAPELYLKRLIVG 257
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE +I++ +D GT
Sbjct: 258 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTENLIRQAAIDASGTAV 317
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQGR LD SK F +LTI +AI+K+ PQY + L + FL++ELKK + + L N
Sbjct: 318 LTYQGRELDLSKPFHRLTICQAIQKFAPQYTDAQLADADFLRTELKKFGVNTSAPQFL-N 376
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL+LFEET E++LW PT+I +YP E+SPLAR S+ ITERFELFI G EIA
Sbjct: 377 AGIGTLQLVLFEETAESQLWEPTFIVDYPVEVSPLARASDT-VPGITERFELFITGREIA 435
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RF+ Q++ K+ E + YYD DYI ALEYGMPP GCGIG+DRL+
Sbjct: 436 NGFSELNDAEDQADRFRKQVEQKD-AGDEEAMYYDADYIRALEYGMPPTGGCGIGIDRLV 494
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S NIRDVILFPHLR E+
Sbjct: 495 MLLTDSPNIRDVILFPHLRRED 516
>gi|237813010|ref|YP_002897461.1| lysyl-tRNA synthetase [Burkholderia pseudomallei MSHR346]
gi|237504206|gb|ACQ96524.1| lysine--tRNA ligase [Burkholderia pseudomallei MSHR346]
Length = 508
Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust.
Identities = 260/442 (58%), Positives = 333/442 (75%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ +++ +G Y FK +D+GDI+ A+G LF+
Sbjct: 75 MLKRVMGKASFATVQDGSG-----QIQFFVTPADVGAETYDAFKKWDLGDIVAARGVLFR 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS+K + L+L+ K+LRPLP+KF L++QE +YR RY+DLI+ TR F+ RT+
Sbjct: 130 TNKGELSVKCTELRLLAKALRPLPDKFHGLADQETRYRQRYVDLIVTPETRATFRARTKA 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+SIR FM DFMEVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 190 IASIRKFMSDADFMEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPELYLKRLIVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE++I++ +D +GT
Sbjct: 250 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTERLIRQAAVDALGTAT 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LD +K F +LTI +AI+KY P Y + L + FL+ ELK++ Q LN
Sbjct: 310 IRYQGRELDLAKPFHRLTITQAIQKYAPNYTDGQLSDDAFLRGELKRLGVDVTQPAFLNA 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E +LW PT+I +YP E+SPLAR+S+ ITERFELF+ G EIA
Sbjct: 370 -GIGALQLALFEETAEAQLWEPTFIIDYPIEVSPLARESDT-VAGITERFELFVTGREIA 427
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF+ Q++ K+ E + ++D DYI ALEYGMPP GCGIG+DRL+
Sbjct: 428 NGFSELNDPEDQAARFRKQVEQKD-AGDEEAMFFDADYIRALEYGMPPTGGCGIGIDRLV 486
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S IRDV+LFPHLR E+
Sbjct: 487 MLLTDSPTIRDVLLFPHLRRED 508
>gi|330817653|ref|YP_004361358.1| Lysyl-tRNA synthetase [Burkholderia gladioli BSR3]
gi|327370046|gb|AEA61402.1| Lysyl-tRNA synthetase [Burkholderia gladioli BSR3]
Length = 509
Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust.
Identities = 259/442 (58%), Positives = 334/442 (75%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
ML+RVMGK SF +QD SG +IQ +++ +G Y FK +D+GDI+ A G LF+
Sbjct: 76 MLRRVMGKASFATVQDGSG-----QIQFFVTPADVGAETYDAFKKWDLGDIVAASGVLFR 130
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS+K + L+L+ K+LRPLP+KF L++QE++YR RY+DLI+ TR F+ RT+
Sbjct: 131 TNKGELSVKCTELRLLAKALRPLPDKFHGLADQEMRYRQRYVDLIVTPETRNTFRARTKA 190
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+SIR FM DFMEVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRL++G
Sbjct: 191 IASIRKFMADADFMEVETPMLHPIPGGATAKPFVTHHNALDMEMFLRIAPELYLKRLVVG 250
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y W+M FTE++I++ +D +GT
Sbjct: 251 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWMMDFTEQVIRQAAVDSLGTAT 310
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LD +K F +LTI +AI+KY P Y++ L + FL++ELK+ Q LN
Sbjct: 311 IQYQGRELDLAKPFHRLTIKQAIQKYAPDYSDAQLADVAFLRTELKRFGVDVGQPAFLNA 370
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E +LW PT+I +YP E+SPLAR+S+ +TERFELF+ G EIA
Sbjct: 371 -GLGALQLALFEETAEAQLWEPTFIIDYPVEVSPLARESDA-MPGVTERFELFMTGREIA 428
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RFK Q+D K+ E + Y+D DYI ALEYGMPP GCGIG+DRL+
Sbjct: 429 NGFSELNDPEDQAARFKKQVDQKD-AGDEEAMYFDADYIRALEYGMPPTGGCGIGIDRLV 487
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S IRDV+LFPHLR E+
Sbjct: 488 MLLTDSPTIRDVLLFPHLRRED 509
>gi|300692009|ref|YP_003753004.1| lysine tRNA synthetase, constitutive [Ralstonia solanacearum PSI07]
gi|299079069|emb|CBJ51731.1| lysine tRNA synthetase, constitutive [Ralstonia solanacearum PSI07]
gi|344170630|emb|CCA83053.1| lysine tRNA synthetase, constitutive [blood disease bacterium R229]
Length = 510
Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust.
Identities = 266/442 (60%), Positives = 340/442 (76%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ YI+ + +G++LY FK++D+GDII A+G LF+
Sbjct: 77 MLKRVMGKASFATVQDGSG-----QIQFYITRDRVGEDLYAAFKHWDLGDIIAARGVLFR 131
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++V L+L++KSLRPLP+KF L++QE+KYR RY+DLI++ TR F+ RT+
Sbjct: 132 TNKGELSVQVQELRLLSKSLRPLPDKFHGLADQEMKYRQRYVDLIVSPETRNTFRARTKA 191
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+S+R M FMEVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 192 IASLRRHMGDAGFMEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPELYLKRLIVG 251
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF +++EIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM +TE +I++ +D G+
Sbjct: 252 GFERVYEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDYTENLIRQAAIDATGSAT 311
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
++YQGR LD SK F +LTI +AI+KY PQY L + FL++ELKK + + L N
Sbjct: 312 LNYQGRELDLSKPFHRLTITQAIQKYAPQYTNAQLADADFLRTELKKFKIDTHAPQFL-N 370
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL+LFEET E +LW PT+I +YP E+SPLAR S+ ITERFELFI G EIA
Sbjct: 371 AGVGTLQLVLFEETAEAQLWEPTFIIDYPVEVSPLARGSDT-LPGITERFELFITGREIA 429
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF+ Q++ K+ E + YYD DYI ALEYGMPP GCGIG+DRL+
Sbjct: 430 NGFSELNDPEDQAERFRKQVEQKD-AGDEEAMYYDADYIRALEYGMPPTGGCGIGIDRLV 488
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S NIRDVILFPHLR E+
Sbjct: 489 MLLTDSPNIRDVILFPHLRRED 510
>gi|107028702|ref|YP_625797.1| lysyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
gi|116690139|ref|YP_835762.1| lysyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
gi|170733472|ref|YP_001765419.1| lysyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
gi|254247790|ref|ZP_04941111.1| Lysyl-tRNA synthetase (class II) [Burkholderia cenocepacia PC184]
gi|122977748|sp|Q1BHT1.1|SYK_BURCA RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|166229795|sp|A0K8P2.1|SYK_BURCH RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|238688559|sp|B1JUZ7.1|SYK_BURCC RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|105897866|gb|ABF80824.1| lysyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
gi|116648228|gb|ABK08869.1| lysyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
gi|124872566|gb|EAY64282.1| Lysyl-tRNA synthetase (class II) [Burkholderia cenocepacia PC184]
gi|169816714|gb|ACA91297.1| lysyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
Length = 508
Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust.
Identities = 261/442 (59%), Positives = 336/442 (76%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ +++ +G + Y FK +D+GDI+ A+G LF+
Sbjct: 75 MLKRVMGKASFATVQDGSG-----QIQFFVTPNDVGADTYDAFKKWDLGDIVAARGVLFR 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++ L+L++K+LRPLP+KF LS+QE++YR RY+DLI+ TR F+ RT+
Sbjct: 130 TNKGELSVQCKELRLLSKALRPLPDKFHGLSDQEMRYRQRYVDLIVTPETRDTFRARTKT 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+SIR FM+ DFMEVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 190 IASIRKFMDNADFMEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPELYLKRLIVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE++I++ +D +GT
Sbjct: 250 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTEQLIRQAAIDALGTAT 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LD +K F +LTI +AI+KY P Y + L + FL++ELK+ +Q LN
Sbjct: 310 IQYQGRELDLAKPFHRLTITQAIQKYAPDYTDGQLSDDAFLRTELKRFGVDVSQPAFLNA 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E +LW PT+I +YP E+SPLAR S+ ITERFELF+ G EIA
Sbjct: 370 -GIGALQLALFEETAEAQLWEPTFIIDYPVEVSPLARASDT-VPGITERFELFMTGREIA 427
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RFK Q++ K+ E + ++D DYI ALEYGMPP GCGIG+DRL+
Sbjct: 428 NGFSELNDPEDQAARFKKQVEQKD-AGDEEAMFFDADYIRALEYGMPPTGGCGIGIDRLV 486
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S IRDV+LFPHLR E+
Sbjct: 487 MLLTDSPTIRDVLLFPHLRRED 508
>gi|206560552|ref|YP_002231317.1| lysyl-tRNA synthetase [Burkholderia cenocepacia J2315]
gi|421870203|ref|ZP_16301838.1| Lysyl-tRNA synthetase (class II) [Burkholderia cenocepacia H111]
gi|444360900|ref|ZP_21162063.1| lysine--tRNA ligase [Burkholderia cenocepacia BC7]
gi|444372630|ref|ZP_21172070.1| lysine--tRNA ligase [Burkholderia cenocepacia K56-2Valvano]
gi|238693118|sp|B4EDB2.1|SYK_BURCJ RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|198036594|emb|CAR52491.1| lysyl-tRNA synthetase [Burkholderia cenocepacia J2315]
gi|358069729|emb|CCE52716.1| Lysyl-tRNA synthetase (class II) [Burkholderia cenocepacia H111]
gi|443593217|gb|ELT61970.1| lysine--tRNA ligase [Burkholderia cenocepacia K56-2Valvano]
gi|443599012|gb|ELT67323.1| lysine--tRNA ligase [Burkholderia cenocepacia BC7]
Length = 508
Score = 579 bits (1492), Expect = e-162, Method: Compositional matrix adjust.
Identities = 261/442 (59%), Positives = 335/442 (75%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ +++ +G Y FK +D+GDI+ A+G LF+
Sbjct: 75 MLKRVMGKASFATVQDGSG-----QIQFFVTPNDVGAETYDAFKKWDLGDIVAARGVLFR 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++ L+L++K+LRPLP+KF LS+QE++YR RY+DLI+ TR F+ RT+
Sbjct: 130 TNKGELSVQCKELRLLSKALRPLPDKFHGLSDQEMRYRQRYVDLIVTPETRDTFRARTKT 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+SIR FM+ DFMEVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 190 IASIRKFMDNADFMEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPELYLKRLIVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE++I++ +D +GT
Sbjct: 250 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTEQLIRQAAIDALGTAT 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LD +K F +LTI +AI+KY P Y + L + FL++ELK+ +Q LN
Sbjct: 310 IQYQGRELDLAKPFHRLTITQAIQKYAPDYTDGQLSDDAFLRTELKRFGVDVSQPAFLNA 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E +LW PT+I +YP E+SPLAR S+ ITERFELF+ G EIA
Sbjct: 370 -GIGALQLALFEETAEAQLWEPTFIIDYPVEVSPLARASDT-VPGITERFELFMTGREIA 427
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RFK Q++ K+ E + ++D DYI ALEYGMPP GCGIG+DRL+
Sbjct: 428 NGFSELNDPEDQAARFKKQVEQKD-AGDEEAMFFDADYIRALEYGMPPTGGCGIGIDRLV 486
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S IRDV+LFPHLR E+
Sbjct: 487 MLLTDSPTIRDVLLFPHLRRED 508
>gi|395762775|ref|ZP_10443444.1| lysyl-tRNA ligase [Janthinobacterium lividum PAMC 25724]
Length = 509
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 270/443 (60%), Positives = 335/443 (75%), Gaps = 8/443 (1%)
Query: 1 MLKRVMGK-ISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLF 59
MLKR GK +F LQD SGP ++G+IQ+Y + ++ G+ +YD+GDI+G GTLF
Sbjct: 74 MLKREAGKKAAFATLQDASGPKADGRIQIYATLDLTGEAAMAALHHYDLGDILGVTGTLF 133
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL+IKV+ L+LITKSLRPLP+KF L++QE KYR RY+DLI+NE TR+ FK RT
Sbjct: 134 KTKTDELTIKVTQLRLITKSLRPLPDKFHGLADQETKYRQRYVDLIMNEETRRTFKARTA 193
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
ISSIR FMEKN+FMEVETP+LH PGGA AKPFITHHN+L+M+M+LRIAPELYLKRL++
Sbjct: 194 AISSIRRFMEKNEFMEVETPMLHTIPGGAAAKPFITHHNALDMQMYLRIAPELYLKRLVV 253
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF+++FEIN+NFRNEG+S RHNPEFTM+EFYAAYT+Y WLM FTE +I++ +D GT
Sbjct: 254 GGFDRVFEINRNFRNEGVSIRHNPEFTMMEFYAAYTDYKWLMDFTEAVIRQAAIDAHGTA 313
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y GR LD +K F +LTI+EAI KY P Y+ L + F+K ELKK K L
Sbjct: 314 SLTYGGRELDLAKPFHRLTIVEAINKYAPGYSAEQLSDAEFIKEELKKFGVKPFATAGLG 373
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
LQL LFEET E +LW PTYI +YP E+SPLAR S+ ITERFELF++G EI
Sbjct: 374 -----ALQLALFEETAEAQLWEPTYIIDYPVEVSPLARASDT-VAGITERFELFMVGREI 427
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
ANGFSELND E+QS RF Q+ K+ E + +YD DYI ALEYGMPPA GCGIG+DRL
Sbjct: 428 ANGFSELNDAEDQSARFLAQVAAKD-AGDEEAMFYDADYIRALEYGMPPAGGCGIGIDRL 486
Query: 420 IMLLTNSKNIRDVILFPHLRNEN 442
+M++T+S NIRDV+LFPHLR E+
Sbjct: 487 MMIITDSPNIRDVLLFPHLRRED 509
>gi|344174185|emb|CCA85967.1| lysine tRNA synthetase, constitutive [Ralstonia syzygii R24]
Length = 510
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 265/442 (59%), Positives = 340/442 (76%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ YI+ + +G+++Y FK++D+GDII A+G LF+
Sbjct: 77 MLKRVMGKASFATVQDGSG-----QIQFYITRDRVGEDIYAAFKHWDLGDIIAARGVLFR 131
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++V L+L++KSLRPLP+KF L++QE+KYR RY+DLI++ TR F+ RT+
Sbjct: 132 TNKGELSVQVQELRLLSKSLRPLPDKFHGLADQEMKYRQRYVDLIVSPETRNTFRARTKA 191
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+S+R M FMEVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 192 IASLRRHMGDAGFMEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPELYLKRLIVG 251
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF +++EIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM +TE +I++ +D G+
Sbjct: 252 GFERVYEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDYTENLIRQAAIDATGSAT 311
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
++YQGR LD SK F +LTI +AI+KY PQY L + FL++ELKK + + L N
Sbjct: 312 LNYQGRELDLSKPFHRLTITQAIQKYAPQYTNAQLADADFLRTELKKFKIDTHAPQFL-N 370
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL+LFEET E +LW PT+I +YP E+SPLAR S+ ITERFELFI G EIA
Sbjct: 371 AGVGTLQLVLFEETAEAQLWEPTFIIDYPVEVSPLARGSDT-LPGITERFELFITGREIA 429
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF+ Q++ K+ E + YYD DYI ALEYGMPP GCGIG+DRL+
Sbjct: 430 NGFSELNDPEDQAERFRKQVEQKD-AGDEEAMYYDADYIRALEYGMPPTGGCGIGIDRLV 488
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S NIRDVILFPHLR E+
Sbjct: 489 MLLTDSPNIRDVILFPHLRRED 510
>gi|134095413|ref|YP_001100488.1| lysyl-tRNA synthetase [Herminiimonas arsenicoxydans]
gi|166229807|sp|A4G778.1|SYK_HERAR RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|133739316|emb|CAL62365.1| Lysyl-tRNA synthetase (Lysine--tRNA ligase) (LysRS) [Herminiimonas
arsenicoxydans]
Length = 511
Score = 578 bits (1490), Expect = e-162, Method: Compositional matrix adjust.
Identities = 267/443 (60%), Positives = 335/443 (75%), Gaps = 8/443 (1%)
Query: 1 MLKRVMGK-ISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLF 59
MLKR GK +F LQD SG ++G+IQ+Y++ + G+ +YD+GDI+G GTLF
Sbjct: 76 MLKREAGKKAAFATLQDASGSKADGRIQIYVTLNLTGEAAMAALHHYDLGDILGVSGTLF 135
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL+IKVS L+LITKSLRPLP+KF L++QE KYR RY+DLI+NE+TR+ FK RT
Sbjct: 136 KTKTDELTIKVSELRLITKSLRPLPDKFHGLADQETKYRQRYVDLIMNEDTRRTFKARTA 195
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
ISSIR FME+NDFMEVETP+LH PGGA AKPF THHN+L+M+MFLRIAPELYLKRL++
Sbjct: 196 AISSIRRFMERNDFMEVETPMLHTIPGGAAAKPFTTHHNALDMEMFLRIAPELYLKRLVV 255
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF+++FEIN+NFRNEG+S RHNPEFTM+EFYAAYT+Y WLM FTE +I++ +D GT
Sbjct: 256 GGFDRVFEINRNFRNEGVSIRHNPEFTMMEFYAAYTDYKWLMDFTEAVIRQAAIDAHGTA 315
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y GR LD +K F +LTI+ AI K+ PQY L + ++K+ELKK K + L
Sbjct: 316 TLTYGGRELDLAKPFHRLTIVGAINKFAPQYTHEQLHDAEYIKAELKKFGVKPHAHSGLG 375
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
LQL LFEET E +LW PTYI +YP E+SPLAR S+ ITERFELF++G EI
Sbjct: 376 -----ALQLALFEETAEAQLWEPTYIIDYPVEVSPLARASDT-VAGITERFELFMVGREI 429
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
ANGFSELND E+Q+ RF+ Q+ K+ E + YYD DYI ALEYGMPP GCGIG+DRL
Sbjct: 430 ANGFSELNDAEDQAARFQAQVAAKD-AGDEEAMYYDADYIRALEYGMPPTGGCGIGIDRL 488
Query: 420 IMLLTNSKNIRDVILFPHLRNEN 442
+M++T+S NIRDV+LFPHLR E+
Sbjct: 489 MMIITDSPNIRDVLLFPHLRRED 511
>gi|194289271|ref|YP_002005178.1| lysyl-tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
gi|254782472|sp|B3R478.1|SYK_CUPTR RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|193223106|emb|CAQ69111.1| lysine tRNA synthetase, constitutive [Cupriavidus taiwanensis LMG
19424]
Length = 517
Score = 577 bits (1486), Expect = e-162, Method: Compositional matrix adjust.
Identities = 267/442 (60%), Positives = 337/442 (76%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ YI+ + +G+ +Y FK++D+GDII A+G LF+
Sbjct: 84 MLKRVMGKASFATVQDGSG-----QIQFYITRDKVGEEVYAAFKHWDLGDIISARGELFR 138
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++V L+L++KSLRPLP+KF L++QE+KYR RY+DLI++ TR F+ RT
Sbjct: 139 TNKGELSVQVRELRLLSKSLRPLPDKFHGLADQEMKYRQRYVDLIVSPETRNTFRARTDA 198
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
ISS+R M FMEVETP+LH PGGA AKPFITHHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 199 ISSLRRHMADAGFMEVETPMLHPIPGGAAAKPFITHHNALDMQMFLRIAPELYLKRLIVG 258
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE +I+K +D G+
Sbjct: 259 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTEDLIRKAAIDARGSAV 318
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQ R LD SK F +LTI +AI+K+ PQY + L + FL++ELKK N + L N
Sbjct: 319 LTYQDRELDLSKPFHRLTICQAIQKFAPQYTDAQLADAEFLRTELKKFGVNTNAPQFL-N 377
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL+LFEET E++LW PT+I +YP E+SPLAR S+ ITERFELFI G EIA
Sbjct: 378 AGLGTLQLVLFEETAESQLWEPTFIVDYPVEVSPLARASDT-VPGITERFELFITGREIA 436
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RF+ Q++ K+ E + Y+D DYI ALEYGMPP GCGIG+DRL+
Sbjct: 437 NGFSELNDAEDQADRFRKQVEQKD-AGDEEAMYFDADYIRALEYGMPPTGGCGIGIDRLV 495
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S NIRDVILFPHLR E+
Sbjct: 496 MLLTDSPNIRDVILFPHLRKED 517
>gi|350545575|ref|ZP_08915047.1| Lysyl-tRNA synthetase (class II) [Candidatus Burkholderia kirkii
UZHbot1]
gi|350526632|emb|CCD39930.1| Lysyl-tRNA synthetase (class II) [Candidatus Burkholderia kirkii
UZHbot1]
Length = 534
Score = 577 bits (1486), Expect = e-162, Method: Compositional matrix adjust.
Identities = 262/442 (59%), Positives = 336/442 (76%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ +++ +G Y FK +D+GDI+ A+G LF+
Sbjct: 101 MLKRVMGKASFATVQDGSG-----QIQFFVTPADVGAETYDAFKKWDLGDIVAARGVLFR 155
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++ + L+L++K+LRPLP+KF L++QE++YR RY+DLI+ +RK F RT+
Sbjct: 156 TNKGELSVRCTELRLLSKALRPLPDKFHGLADQEMRYRQRYVDLIVTPESRKTFMARTKA 215
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
++SIR+FM + +FMEVETP+LH PGGA AKPF THHN+L+M+M LRIAPELYLKRLI+G
Sbjct: 216 VTSIRNFMAQANFMEVETPMLHPIPGGAAAKPFTTHHNALDMQMLLRIAPELYLKRLIVG 275
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SP HNPEFTM+EFYAAYT+Y WLM FTE++I++ +D +GT
Sbjct: 276 GFERVFEINRNFRNEGVSPCHNPEFTMMEFYAAYTDYRWLMDFTEQLIRQAAVDALGTAV 335
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LD S+ F +LTI +AI+KY PQY + L + FL++ELKK Q LN
Sbjct: 336 ITYQGRELDLSRPFHRLTINQAIQKYAPQYTDGQLSDAAFLRTELKKFGVDTAQPAFLNA 395
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E++LW PTYI +YP E+SPLAR S+ ITERFELFI G EIA
Sbjct: 396 -GLGSLQLALFEETAESQLWEPTYIVDYPIEVSPLARASD-SVPGITERFELFITGREIA 453
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF+ Q+D K+ E + Y+D DYI ALEYGMPP GCGIG+DRL+
Sbjct: 454 NGFSELNDPEDQAARFQKQVDQKD-AGDEEAMYFDADYIRALEYGMPPTGGCGIGIDRLV 512
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S +IRDVILFPHLR E+
Sbjct: 513 MLLTDSPSIRDVILFPHLRRED 534
>gi|152980207|ref|YP_001352950.1| lysyl-tRNA synthetase [Janthinobacterium sp. Marseille]
gi|166229808|sp|A6SXF3.1|SYK_JANMA RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|151280284|gb|ABR88694.1| lysyl-tRNA synthetase [Janthinobacterium sp. Marseille]
Length = 511
Score = 576 bits (1485), Expect = e-162, Method: Compositional matrix adjust.
Identities = 266/443 (60%), Positives = 335/443 (75%), Gaps = 8/443 (1%)
Query: 1 MLKRVMGK-ISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLF 59
MLKR GK +F LQD SG ++G+IQ+Y + ++ G+ +YD+GDI+G GTLF
Sbjct: 76 MLKREAGKKAAFATLQDASGAKADGRIQIYATLDLTGEAAMAALHHYDLGDILGVVGTLF 135
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL+IKV+ L+L+TKSLRPLP+KF L++QE KYR RY+DLI+NE+TR+ FK RT
Sbjct: 136 KTKTDELTIKVTELRLLTKSLRPLPDKFHGLADQETKYRQRYVDLIMNEDTRRTFKARTA 195
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
ISSIR FM +NDFMEVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRL++
Sbjct: 196 AISSIRRFMAENDFMEVETPMLHTIPGGAAAKPFVTHHNALDMEMFLRIAPELYLKRLVV 255
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF+++FEIN+NFRNEG+S RHNPEFTM+EFYAAYT+Y WLM FTE +I++ +D GT
Sbjct: 256 GGFDRVFEINRNFRNEGVSIRHNPEFTMMEFYAAYTDYKWLMDFTEAVIRQAAIDAHGTA 315
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y GR LD +K F +LTI+ AI KY PQY L + F+K+ELKK K + L
Sbjct: 316 TLTYGGRELDLAKPFHRLTIVGAINKYAPQYTNEQLHDAEFIKAELKKFGVKPHAHSGLG 375
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
LQL LFEET E +LW PTYI +YP E+SPLAR S+ ITERFELF++G EI
Sbjct: 376 -----ALQLALFEETAEAQLWEPTYIIDYPVEVSPLARASDT-VAGITERFELFMVGREI 429
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
ANGFSELND E+Q+ RF+ Q+ K+ E + YYD DYI ALEYGMPP GCGIG+DRL
Sbjct: 430 ANGFSELNDAEDQAARFQAQVAAKD-AGDEEAMYYDADYIRALEYGMPPTGGCGIGIDRL 488
Query: 420 IMLLTNSKNIRDVILFPHLRNEN 442
+M++T+S NIRDV+LFPHLR E+
Sbjct: 489 MMIITDSPNIRDVLLFPHLRRED 511
>gi|339325255|ref|YP_004684948.1| lysyl-tRNA synthetase LysS [Cupriavidus necator N-1]
gi|338165412|gb|AEI76467.1| lysyl-tRNA synthetase LysS [Cupriavidus necator N-1]
Length = 514
Score = 576 bits (1485), Expect = e-162, Method: Compositional matrix adjust.
Identities = 267/442 (60%), Positives = 337/442 (76%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ YI+ + +G+ +Y FK++D+GDII A+G LF+
Sbjct: 81 MLKRVMGKASFATVQDGSG-----QIQFYITRDKVGEEVYAAFKHWDLGDIISARGELFR 135
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++V L+L++KSLRPLP+KF L++QE+KYR RY+DLI++ TR F+ RT
Sbjct: 136 TNKGELSVQVRELRLLSKSLRPLPDKFHGLADQEMKYRQRYVDLIVSPETRNTFRARTNA 195
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
ISS+R M FMEVETP+LH PGGA AKPFITHHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 196 ISSLRRHMADAGFMEVETPMLHPIPGGAAAKPFITHHNALDMQMFLRIAPELYLKRLIVG 255
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE +I+K +D G+
Sbjct: 256 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTEDLIRKAAIDARGSAV 315
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQ R LD SK F +LTI +AI+K+ PQY + L + FL++ELKK N + L N
Sbjct: 316 LTYQDRELDLSKPFHRLTICQAIQKFAPQYTDAQLADAGFLRTELKKFGVNTNAPQFL-N 374
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL+LFEET E++LW PT+I +YP E+SPLAR S+ ITERFELFI G EIA
Sbjct: 375 AGLGTLQLVLFEETAESQLWEPTFIVDYPVEVSPLARASDT-VPGITERFELFITGREIA 433
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RF+ Q++ K+ E + Y+D DYI ALEYGMPP GCGIG+DRL+
Sbjct: 434 NGFSELNDAEDQADRFRKQVEQKD-AGDEEAMYFDADYIRALEYGMPPTGGCGIGIDRLV 492
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S NIRDVILFPHLR E+
Sbjct: 493 MLLTDSPNIRDVILFPHLRRED 514
>gi|78066893|ref|YP_369662.1| lysyl-tRNA synthetase [Burkholderia sp. 383]
gi|77967638|gb|ABB09018.1| Lysyl-tRNA synthetase, class-2 [Burkholderia sp. 383]
Length = 524
Score = 576 bits (1484), Expect = e-162, Method: Compositional matrix adjust.
Identities = 260/442 (58%), Positives = 334/442 (75%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ +++ +G Y FK +D+GDI+ A+G LF+
Sbjct: 91 MLKRVMGKASFATVQDGSG-----QIQFFVTPNDVGAETYDAFKKWDLGDIVAARGVLFR 145
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++ L+L++K+LRPLP+KF LS+QE++YR RY+DLI+ TR F+ RT+
Sbjct: 146 TNKGELSVQCKELRLLSKALRPLPDKFHGLSDQEMRYRQRYVDLIVTPETRDTFRARTKT 205
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+SIR FM+ +FMEVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 206 IASIRKFMDNAEFMEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPELYLKRLIVG 265
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE++I++ +D +GT
Sbjct: 266 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTEQLIRQAAIDALGTAT 325
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LD +K F +LTI +AI+KY P Y L + FL++ELK+ +Q LN
Sbjct: 326 IQYQGRELDLAKPFHRLTITQAIQKYAPDYTAGQLSDDAFLRTELKRFGVDVSQPAFLNA 385
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E +LW PT+I +YP E+SPLAR S+ ITERFELF+ G EIA
Sbjct: 386 -GIGALQLALFEETAEAQLWEPTFIIDYPVEVSPLARASDT-VPGITERFELFMTGREIA 443
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RFK Q++ K+ E + ++D DYI ALEYGMPP GCGIG+DRL+
Sbjct: 444 NGFSELNDPEDQAARFKKQVEQKD-AGDEEAMFFDADYIRALEYGMPPTGGCGIGIDRLV 502
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S IRDV+LFPHLR E+
Sbjct: 503 MLLTDSPTIRDVLLFPHLRRED 524
>gi|332284054|ref|YP_004415965.1| lysyl-tRNA synthetase [Pusillimonas sp. T7-7]
gi|330428007|gb|AEC19341.1| lysyl-tRNA synthetase [Pusillimonas sp. T7-7]
Length = 506
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 258/442 (58%), Positives = 340/442 (76%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF LQD+SG +IQ+++ +G++LYT FK +DIGDI+ +G +FK
Sbjct: 73 MLKRVMGKASFATLQDSSG-----RIQIFLDKNTVGEDLYTQFKTWDIGDIVAVEGAMFK 127
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS+ ++++L+TKSLRPLP+KF +++ E++YR RY+DLI+ E TR+ F R++
Sbjct: 128 TNKGELSVHAATVRLLTKSLRPLPDKFHGVADTELRYRQRYVDLIMTEETRRCFLARSKA 187
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I SIRH M F+EVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRL++G
Sbjct: 188 IGSIRHHMINAGFLEVETPMLHPIPGGAAAKPFVTHHNALDMEMFLRIAPELYLKRLVVG 247
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF+++FE+N+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE +I++ + G+
Sbjct: 248 GFDRVFEVNRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTETLIREAAIAASGSAV 307
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQ ++LD S+ F++LTI++AI KY P Y + LQ+ FL++ELK++ N +L
Sbjct: 308 LTYQEKVLDLSQPFDRLTIVQAILKYAPGYTQEQLQDGTFLRTELKRLGADVN-GPVLAR 366
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E KLWNPTYI +YP E+SPLAR S+ + ITERFELF+ G EIA
Sbjct: 367 AGLGGLQLALFEETAEAKLWNPTYIIDYPVEVSPLARASDTQ-EGITERFELFMTGREIA 425
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF Q++ K+ + E + YYD DYI ALEYGMPP GCGIG+DRL+
Sbjct: 426 NGFSELNDPEDQAARFLAQVEAKDAGDEE-AMYYDADYIRALEYGMPPTGGCGIGIDRLV 484
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S +IRDVILFPHLR E+
Sbjct: 485 MLLTDSPSIRDVILFPHLRRED 506
>gi|393775463|ref|ZP_10363776.1| LysS protein [Ralstonia sp. PBA]
gi|392717513|gb|EIZ05074.1| LysS protein [Ralstonia sp. PBA]
Length = 505
Score = 575 bits (1481), Expect = e-161, Method: Compositional matrix adjust.
Identities = 265/444 (59%), Positives = 338/444 (76%), Gaps = 12/444 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR+MGK SF +QD SG +IQ YI+ + +G+ Y FK++D+GDII A+GTLF+
Sbjct: 72 MLKRIMGKASFATVQDGSG-----QIQFYITRDNLGEEAYAAFKHWDMGDIIAARGTLFR 126
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS+ V L+L++KSLRPLP+KF L++QE+KYR RY+DLI++ TR F+ RT+
Sbjct: 127 TNKGELSVLVKELRLLSKSLRPLPDKFHGLADQEMKYRQRYVDLIVSPETRNTFRARTKA 186
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+SS+R M FMEVETP+LH PGGA AKPFITHHN+L+M+M++RIAPELYLKRLI+G
Sbjct: 187 LSSLRRHMADAGFMEVETPMLHPIPGGAAAKPFITHHNALDMQMYMRIAPELYLKRLIVG 246
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FE+N+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE +I+ +D G+
Sbjct: 247 GFERVFEVNRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTESLIRNAAIDAQGSAV 306
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKK--INPKFNQKKIL 298
+ YQGR LD SK F +LTI AI+KY PQY + L + FL++EL+K +NP + L
Sbjct: 307 LTYQGRELDLSKPFHRLTITGAIQKYAPQYTDAQLADAEFLRTELRKFGVNP---EAANL 363
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
N LQL LFEET E++LW PT+I +YP E+SPLAR S+ ITERFELFI G E
Sbjct: 364 KNAGIGALQLALFEETAESQLWEPTFIIDYPVEVSPLARASDT-VPGITERFELFITGRE 422
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IANGFSELNDPE+Q+ RF+ Q++ K+ E + +YD DYI ALEYGMPP GCGIG+DR
Sbjct: 423 IANGFSELNDPEDQAARFRKQVEQKD-AGDEEAMFYDADYIRALEYGMPPTGGCGIGIDR 481
Query: 419 LIMLLTNSKNIRDVILFPHLRNEN 442
L+MLLT+S NIRDVILFPHLR E+
Sbjct: 482 LVMLLTDSPNIRDVILFPHLRKED 505
>gi|393758649|ref|ZP_10347469.1| lysyl-tRNA ligase [Alcaligenes faecalis subsp. faecalis NCIB 8687]
gi|393163085|gb|EJC63139.1| lysyl-tRNA ligase [Alcaligenes faecalis subsp. faecalis NCIB 8687]
Length = 507
Score = 575 bits (1481), Expect = e-161, Method: Compositional matrix adjust.
Identities = 261/442 (59%), Positives = 338/442 (76%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF LQD SG +IQ+Y+ ++G+ Y +FK +DIGDI+ +GT+FK
Sbjct: 74 MLKRVMGKASFATLQDASG-----RIQIYLDKGVLGEERYAEFKGWDIGDILAVEGTVFK 128
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS+ +S++L+ KSLRPLP+KF L++QE+KYR RY+DLI++E+TR+ F R+++
Sbjct: 129 TNKGELSVHATSVRLLAKSLRPLPDKFHGLADQELKYRQRYVDLIMSEHTRQTFLARSKV 188
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+SS+R M + DF+EVETP+LH PGGA AKPFITHHN+L+M+M+LRIAPELYLKRLI+G
Sbjct: 189 MSSLRQHMAQADFLEVETPMLHPIPGGASAKPFITHHNALDMEMYLRIAPELYLKRLIVG 248
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE +I++ + GT
Sbjct: 249 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYQWLMDFTENLIREAAISACGTAT 308
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQ R LD S+ F++LTI AI KY P Y + LQ+ FL++EL ++ N L +
Sbjct: 309 LQYQERELDLSQPFDRLTITGAIMKYAPSYTQEQLQDLQFLRTELARLKVDVNAPP-LRD 367
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E+KLW+PT+I +YP E+SPLAR S+ + ITERFELFI G EIA
Sbjct: 368 AGLGALQLALFEETAESKLWHPTFIVDYPVEVSPLARASDTQ-EGITERFELFITGREIA 426
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF+ Q+ K+ E + +YD DYI ALEYGMPP GCGIG+DRL+
Sbjct: 427 NGFSELNDPEDQAARFQAQVQAKD-AGDEEAMFYDADYIRALEYGMPPTGGCGIGIDRLV 485
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S IRDVILFPHLR E+
Sbjct: 486 MLLTDSPAIRDVILFPHLRRED 507
>gi|113867187|ref|YP_725676.1| lysyl-tRNA synthetase [Ralstonia eutropha H16]
gi|123134219|sp|Q0KCG3.1|SYK_CUPNH RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|113525963|emb|CAJ92308.1| Lysyl-tRNA synthetase (class II) [Ralstonia eutropha H16]
Length = 514
Score = 574 bits (1480), Expect = e-161, Method: Compositional matrix adjust.
Identities = 266/442 (60%), Positives = 336/442 (76%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ YI+ + +G+ +Y FK++D+GDII A+G LF+
Sbjct: 81 MLKRVMGKASFATVQDGSG-----QIQFYITRDKVGEEVYAAFKHWDLGDIISARGELFR 135
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++V L+L++KSLRPLP+KF L++QE+KYR RY+DLI++ TR F+ RT
Sbjct: 136 TNKGELSVQVRELRLLSKSLRPLPDKFHGLADQEMKYRQRYVDLIVSPETRNTFRARTNA 195
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
ISS+R M FMEVETP+LH PGGA AKPFITHHN+L+M+MF+RIAPELYLKRLI+G
Sbjct: 196 ISSLRRHMADAGFMEVETPMLHPIPGGAAAKPFITHHNALDMQMFMRIAPELYLKRLIVG 255
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE +I+K +D G+
Sbjct: 256 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTEDLIRKAAIDARGSAV 315
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQ R LD SK F +LTI +AI+K+ PQY + L + FL++ELKK N + L N
Sbjct: 316 LTYQDRELDLSKPFHRLTICQAIQKFAPQYTDAQLADAGFLRTELKKFGVNTNAPQFL-N 374
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL+LFEET E +LW PT+I +YP E+SPLAR S+ ITERFELFI G EIA
Sbjct: 375 AGLGTLQLVLFEETAENQLWEPTFIVDYPVEVSPLARASDT-VPGITERFELFITGREIA 433
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RF+ Q++ K+ E + Y+D DYI ALEYGMPP GCGIG+DRL+
Sbjct: 434 NGFSELNDAEDQADRFRKQVEQKD-AGDEEAMYFDADYIRALEYGMPPTGGCGIGIDRLV 492
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S NIRDVILFPHLR E+
Sbjct: 493 MLLTDSPNIRDVILFPHLRRED 514
>gi|427404008|ref|ZP_18894890.1| lysyl-tRNA synthetase [Massilia timonae CCUG 45783]
gi|425717247|gb|EKU80212.1| lysyl-tRNA synthetase [Massilia timonae CCUG 45783]
Length = 512
Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust.
Identities = 263/443 (59%), Positives = 341/443 (76%), Gaps = 7/443 (1%)
Query: 1 MLKRVMGK-ISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLF 59
ML+R GK +F LQD+SGP ++G+IQ+YI+ + G+ ++YD+GDI+G +GTLF
Sbjct: 76 MLRREAGKKAAFATLQDSSGPAASGRIQVYIALDNAGEEAMEALRSYDLGDILGVEGTLF 135
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL++KV++L+LITK++RPLP+KF L++QE KYR RY+DLI+NE TR+ FK RT
Sbjct: 136 KTKTDELTVKVTALRLITKAIRPLPDKFHGLADQETKYRQRYVDLIMNEETRRTFKARTA 195
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+SS+R FMEKN FMEVETP+LH PGGA AKPFITHHN+L+M+M+LRIAPELYLKRL++
Sbjct: 196 AMSSMRRFMEKNGFMEVETPMLHPIPGGAAAKPFITHHNALDMEMYLRIAPELYLKRLVV 255
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF+++FEIN+NFRNEG+S RHNPEFTM+EFYAAYT+Y W+M FTE++I++ +D G+
Sbjct: 256 GGFDRVFEINRNFRNEGVSVRHNPEFTMMEFYAAYTDYKWIMDFTEQVIRQAAIDAQGSA 315
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y GR LD SK F++LTI+EAI KY P Y L + F+K+ELK KF K
Sbjct: 316 VLSYGGRELDLSKPFQRLTIVEAIDKYAPGYTPEQLNDAEFIKTELKT---KFGVKP-FA 371
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
LQL LFEET E LW PT+I +YP E+SPLAR S+ +TERFELF++G EI
Sbjct: 372 TAGLGALQLALFEETAEALLWEPTFIVDYPAEVSPLARASDT-REGVTERFELFMVGREI 430
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
ANGFSELNDPE+Q+ RF Q+ K+ + E + +YD DYI ALEYGMPPA GCGIG+DRL
Sbjct: 431 ANGFSELNDPEDQAARFLAQVAAKDAGDDE-AMFYDADYIRALEYGMPPAGGCGIGIDRL 489
Query: 420 IMLLTNSKNIRDVILFPHLRNEN 442
+ML+T+S NIRDV+LFPHLR E+
Sbjct: 490 MMLITDSPNIRDVLLFPHLRKED 512
>gi|423018561|ref|ZP_17009282.1| lysyl-tRNA synthetase [Achromobacter xylosoxidans AXX-A]
gi|338778323|gb|EGP42798.1| lysyl-tRNA synthetase [Achromobacter xylosoxidans AXX-A]
Length = 507
Score = 573 bits (1476), Expect = e-161, Method: Compositional matrix adjust.
Identities = 256/442 (57%), Positives = 337/442 (76%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF LQD S G+IQ+Y+ +G++ Y FK +DIGDII +G++FK
Sbjct: 74 MLKRVMGKASFATLQD-----STGRIQIYLDRGTLGEDSYAAFKQWDIGDIIAIEGSVFK 128
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS+ ++ +L++KSLRPLP+KF +++QE++YR RY+DLI+ + TR+ F+ R++
Sbjct: 129 TNKGELSVHAATARLLSKSLRPLPDKFHGVADQELRYRQRYVDLIMTDATRRTFEARSKA 188
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+ SIR FM F+EVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 189 VGSIRQFMLNAGFLEVETPMLHPIPGGAAAKPFVTHHNALDMEMFLRIAPELYLKRLIVG 248
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FE+N+NFRNEG+SPRHNPEFTM+EFYAA+ +Y WLM FTE++I++ + G+
Sbjct: 249 GFERVFEVNRNFRNEGVSPRHNPEFTMMEFYAAFADYRWLMDFTEELIRQAAISATGSAV 308
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQ R LD SK F++LTI EAI KY P Y + L + +F+++ELKK+ + +L+
Sbjct: 309 LTYQERELDLSKPFDRLTICEAILKYAPGYTQAQLDDPVFVRAELKKLGADAD-GPVLSR 367
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E KLWNPTYI +YP E+SPLAR S+ ITERFELF+ G EIA
Sbjct: 368 AGLGALQLALFEETAEAKLWNPTYIIDYPVEVSPLARASD-SREGITERFELFMTGREIA 426
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF++Q++ K+ E + YYD DYI ALEYGMPP GCGIG+DRL+
Sbjct: 427 NGFSELNDPEDQAERFRSQVEAKD-AGDEEAMYYDADYIRALEYGMPPTGGCGIGIDRLV 485
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S +IRDVILFPHLR E+
Sbjct: 486 MLLTDSPSIRDVILFPHLRRED 507
>gi|422320029|ref|ZP_16401097.1| lysyl-tRNA synthetase [Achromobacter xylosoxidans C54]
gi|317405232|gb|EFV85570.1| lysyl-tRNA synthetase [Achromobacter xylosoxidans C54]
Length = 507
Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust.
Identities = 256/442 (57%), Positives = 335/442 (75%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF LQD S G+IQ+Y+ +G++ Y FK +DIGDII +G++FK
Sbjct: 74 MLKRVMGKASFATLQD-----STGRIQIYLDRGTLGEDSYAAFKQWDIGDIIAVEGSVFK 128
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS+ ++ +L++KSLRPLP+KF +++QE++YR RY+DLI+ + TR+ F+ R++
Sbjct: 129 TNKGELSVHAATARLLSKSLRPLPDKFHGVADQELRYRQRYVDLIMTDATRRTFEARSKA 188
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+ SIR FM F+EVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 189 MGSIRQFMLNAGFLEVETPMLHPIPGGAAAKPFVTHHNALDMEMFLRIAPELYLKRLIVG 248
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FE+N+NFRNEG+SPRHNPEFTM+EFYAA+ +Y WLM FTE++I++ + G+
Sbjct: 249 GFERVFEVNRNFRNEGVSPRHNPEFTMMEFYAAFADYRWLMDFTEELIRQAAISATGSAV 308
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQ R LD SK F++LTI EAI KY P Y + L + F+++ELKK+ + +L
Sbjct: 309 LTYQERELDLSKPFDRLTICEAILKYAPGYTQAQLDDVAFVRAELKKLGADAD-GPVLAR 367
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E KLWNPTYI +YP E+SPLAR S+ ITERFELF+ G EIA
Sbjct: 368 AGLGALQLALFEETAEAKLWNPTYIIDYPVEVSPLARASDT-REGITERFELFMTGREIA 426
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF++Q++ K+ E + YYD DYI ALEYGMPP GCGIG+DRL+
Sbjct: 427 NGFSELNDPEDQAERFRSQVEAKD-AGDEEAMYYDADYIRALEYGMPPTGGCGIGIDRLV 485
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S +IRDVILFPHLR E+
Sbjct: 486 MLLTDSPSIRDVILFPHLRRED 507
>gi|445496752|ref|ZP_21463607.1| lysyl-tRNA synthetase LysS [Janthinobacterium sp. HH01]
gi|444786747|gb|ELX08295.1| lysyl-tRNA synthetase LysS [Janthinobacterium sp. HH01]
Length = 512
Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust.
Identities = 267/442 (60%), Positives = 333/442 (75%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGK-ISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLF 59
MLKR GK +F LQD SGP ++G+IQ+Y + ++ G+ +YD+GDI+G GTLF
Sbjct: 77 MLKREAGKKAAFATLQDASGPKADGRIQIYATLDLTGEAAMAALHHYDLGDILGVVGTLF 136
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL+IKVS L+LITKSLRPLP+KF L++QE KYR RY+DLI+NE TR+ FK RT
Sbjct: 137 KTKTDELTIKVSELRLITKSLRPLPDKFHGLADQETKYRQRYVDLIMNEETRRTFKARTA 196
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
ISS+R FMEKN+FMEVETP+LH PGGA AKPFITHHN+L+M+MFLRIAPELYLKRL++
Sbjct: 197 AISSMRRFMEKNEFMEVETPMLHAIPGGAAAKPFITHHNALDMQMFLRIAPELYLKRLVV 256
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF+++FEIN+NFRNEG+S RHNPEFTM+EFYAAYT+Y W+M FTE++I++ +D GT
Sbjct: 257 GGFDRVFEINRNFRNEGVSIRHNPEFTMMEFYAAYTDYKWIMNFTEEIIRQAAIDAHGTA 316
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y GR LD +K F +LTI+EAI K+ P Y L + F+K EL K K L
Sbjct: 317 TLTYGGRELDLAKPFHRLTIVEAINKFAPGYTPEQLTDAEFIKKELLKFGVKPFATAGLG 376
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
LQL LFEET E +LW PT+I +YP E+SPLAR S+ ITERFELF++G EI
Sbjct: 377 -----ALQLALFEETAEAQLWEPTFIIDYPAEVSPLARASDT-AAGITERFELFMVGREI 430
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
ANGFSELND E+QS RF Q+ K+ E + +YD DYI ALEYGMPPA GCGIG+DRL
Sbjct: 431 ANGFSELNDAEDQSARFLAQVAAKD-AGDEEAMFYDADYIRALEYGMPPAGGCGIGIDRL 489
Query: 420 IMLLTNSKNIRDVILFPHLRNE 441
+M++T+S NIRDV+LFPHLR E
Sbjct: 490 MMIITDSPNIRDVLLFPHLRRE 511
>gi|149927858|ref|ZP_01916109.1| lysyl-tRNA synthetase [Limnobacter sp. MED105]
gi|149823480|gb|EDM82711.1| lysyl-tRNA synthetase [Limnobacter sp. MED105]
Length = 510
Score = 570 bits (1468), Expect = e-160, Method: Compositional matrix adjust.
Identities = 266/442 (60%), Positives = 341/442 (77%), Gaps = 7/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD +G +IQ YI+NE +G+ ++ +FK++D+GDII AKG LFK
Sbjct: 76 MLKRVMGKASFATVQDGTG-----RIQFYINNEGVGEGVHGEFKHWDLGDIIAAKGKLFK 130
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS+ + + L+ KSLRPLP+KF L++QEIKYR RY+DLI++E TR F R++
Sbjct: 131 TNKGELSVHCTEIHLLAKSLRPLPDKFHGLADQEIKYRQRYVDLIVSEETRSTFVARSRA 190
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+SS+R+FM + F+EVETP+LH PGGA AKPFITHHN+L+M+M+LRIAPELYLKRLI+G
Sbjct: 191 MSSVRNFMADHGFLEVETPMLHPIPGGASAKPFITHHNALDMEMYLRIAPELYLKRLIVG 250
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAY NY LM FTE++I+ G+ K
Sbjct: 251 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYWNYRDLMDFTEQVIQHAATTATGSAK 310
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQGR LD SK F +LTI+EAI+KY P+Y DLQN +LK L K +++ L N
Sbjct: 311 LTYQGRDLDLSKPFARLTIVEAIQKYFPEYGTEDLQNIDYLKKALAKKGVHVDKEPALKN 370
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
+ LQL LFEET+E+ LW PT+I +YP E+SPLAR S+ N+ ITERFELFI G EIA
Sbjct: 371 VGIGALQLALFEETSESLLWEPTFIVDYPVEVSPLARASDA-NSQITERFELFITGREIA 429
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RFK Q++ K E + + ++D D+I ALEYGMPP GCGIG+DRL+
Sbjct: 430 NGFSELNDPEDQADRFKKQVEAK-EAGDDEAMFFDADFIRALEYGMPPTGGCGIGIDRLM 488
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
ML+T+S NIRDVILFPHLR E+
Sbjct: 489 MLITDSPNIRDVILFPHLRRED 510
>gi|293606110|ref|ZP_06688475.1| lysine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
gi|292815565|gb|EFF74681.1| lysine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
Length = 507
Score = 570 bits (1468), Expect = e-160, Method: Compositional matrix adjust.
Identities = 255/442 (57%), Positives = 336/442 (76%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF LQD S G+IQ+Y+ +G++ Y FK +DIGDII +G++FK
Sbjct: 74 MLKRVMGKASFATLQD-----STGRIQIYLDRGTLGEDNYAAFKQWDIGDIIAIEGSVFK 128
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS+ ++ +L++KSLRPLP+KF +++QE++YR RY+DLI+ + TR+ F+ R++
Sbjct: 129 TNKGELSVHAATARLLSKSLRPLPDKFHGVADQELRYRQRYVDLIMTDATRRTFEARSKA 188
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+ SIR FM F+EVETP+LH PGGA AKPF+THHN+L+M+M+LRIAPELYLKRLI+G
Sbjct: 189 VGSIRQFMLNAGFLEVETPMLHPIPGGAAAKPFVTHHNALDMEMYLRIAPELYLKRLIVG 248
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FE+N+NFRNEG+SPRHNPEFTM+EFYAAY Y WLM FTE++I++ + G+
Sbjct: 249 GFERVFEVNRNFRNEGVSPRHNPEFTMMEFYAAYAEYRWLMDFTEELIRQAAISATGSAV 308
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQ R LD SK F++LTI EAI KY P Y + L + +F+++ELKK+ + +L+
Sbjct: 309 LTYQERELDLSKPFDRLTICEAILKYAPGYTQAQLDDPVFVRAELKKLGADAD-GPVLSR 367
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E KLWNPTYI +YP E+SPLAR S+ ITERFELF+ G EIA
Sbjct: 368 AGLGALQLALFEETAEAKLWNPTYIIDYPVEVSPLARASDT-REGITERFELFMTGREIA 426
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF++Q++ K+ E + +YD DYI ALEYGMPP GCGIG+DRL+
Sbjct: 427 NGFSELNDPEDQAERFRSQVEAKD-AGDEEAMFYDADYIRALEYGMPPTGGCGIGIDRLV 485
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S +IRDVILFPHLR E+
Sbjct: 486 MLLTDSPSIRDVILFPHLRRED 507
>gi|297539160|ref|YP_003674929.1| lysyl-tRNA synthetase [Methylotenera versatilis 301]
gi|297258507|gb|ADI30352.1| lysyl-tRNA synthetase [Methylotenera versatilis 301]
Length = 514
Score = 570 bits (1468), Expect = e-160, Method: Compositional matrix adjust.
Identities = 258/442 (58%), Positives = 342/442 (77%), Gaps = 7/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG ++ +IQLY++ ++I + +Y FK++D+GD +GA G LFK
Sbjct: 80 MLKRVMGKASFATIQDGSGANAGSRIQLYVAKDMISEEVYEQFKHWDLGDFLGATGYLFK 139
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELSIKV+ ++L+TKSLRPLP KF L +QE+KYR RY+DLI +E TR F R+++
Sbjct: 140 TKTGELSIKVTEIRLLTKSLRPLPEKFHGLQDQEVKYRQRYVDLITSEETRATFVARSKV 199
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+S+IR+FM +N+F+EVETP+LH PGGA AKPFITHHN+L+M+M++RIAPELYLKRL++G
Sbjct: 200 VSAIRNFMIQNEFLEVETPMLHPIPGGASAKPFITHHNALDMQMYMRIAPELYLKRLVVG 259
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FE+N+NFRNEG+S RHNPEFTM+EFYAAYT+Y WLM FTE I+ + GT
Sbjct: 260 GFERVFEVNRNFRNEGLSVRHNPEFTMMEFYAAYTDYQWLMDFTENCIRTAAIAARGTAV 319
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
++YQGR LD SK F++LTI+ AI+KY PQY L ++ FL++E+ K + K ++
Sbjct: 320 LEYQGRELDLSKPFQRLTIVGAIQKYAPQYTLGQLNDEAFLRAEILK-----HGTKPFDH 374
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E++LW PTYI +YP E+SPLAR S+ +N ITERFELF+ G EIA
Sbjct: 375 AGLGALQLALFEETAESQLWEPTYIIDYPVEVSPLARASD-KNPEITERFELFVTGREIA 433
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RF Q+ K + E + +YD D+I ALEYGMPPA GCGIG+DRL+
Sbjct: 434 NGFSELNDAEDQAARFHAQMKAKEAGDHE-AMFYDADFIRALEYGMPPAGGCGIGIDRLV 492
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
M++T+S +IRDVILFPH+R E+
Sbjct: 493 MMITDSASIRDVILFPHMRAES 514
>gi|187478019|ref|YP_786043.1| lysyl-tRNA synthetase [Bordetella avium 197N]
gi|115422605|emb|CAJ49130.1| lysyl-tRNA synthetase [Bordetella avium 197N]
Length = 504
Score = 569 bits (1467), Expect = e-160, Method: Compositional matrix adjust.
Identities = 258/442 (58%), Positives = 332/442 (75%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF LQD SG +IQLY+ +G+ +Y FK +DIGDII +GT+FK
Sbjct: 71 MLKRVMGKASFATLQDGSG-----RIQLYLERGSLGEEVYAAFKQWDIGDIIAIEGTMFK 125
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS+ +S +L++KSLRPLP+KF +S+QE++YR RY+DLI+ ++TR+ F+ R++
Sbjct: 126 TNKGELSVHATSARLLSKSLRPLPDKFHGVSDQELRYRQRYVDLIMTDSTRRTFEARSKA 185
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I IR M DF+EVETP+LH PGGA AKPF+THHN+L+M+M+LRIAPELYLKRL++G
Sbjct: 186 IGGIRQAMLAADFLEVETPMLHPIPGGAAAKPFVTHHNALDMEMYLRIAPELYLKRLVVG 245
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF+++FEIN+NFRNEG+SPRHNPEFTM+EFYAAY Y W+M FTE +I++ + G+
Sbjct: 246 GFDRVFEINRNFRNEGVSPRHNPEFTMMEFYAAYAEYRWIMDFTESLIRQAAITATGSAV 305
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQ R LD SK F +LTI EAI K+ P Y++ L + FL++ELKK N +L
Sbjct: 306 LTYQERELDLSKPFARLTICEAILKHAPHYSQPQLDDADFLRAELKKFGADVN-GPVLAR 364
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E+KLW PT+I +YP E+SPLAR S+ ITERFELFI G EIA
Sbjct: 365 AGVGALQLALFEETAESKLWEPTFIVDYPVEVSPLARASDT-REGITERFELFITGREIA 423
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF+ Q++ K+ E + Y+D DYI ALEYGMPP GCGIG+DRL+
Sbjct: 424 NGFSELNDPEDQAARFQAQVEAKD-AGDEEAMYFDADYIRALEYGMPPTGGCGIGIDRLV 482
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S +IRDVILFPHLR E+
Sbjct: 483 MLLTDSPSIRDVILFPHLRRED 504
>gi|452125529|ref|ZP_21938113.1| lysyl-tRNA ligase [Bordetella holmesii F627]
gi|452128938|ref|ZP_21941515.1| lysyl-tRNA ligase [Bordetella holmesii H558]
gi|451924759|gb|EMD74900.1| lysyl-tRNA ligase [Bordetella holmesii F627]
gi|451925985|gb|EMD76123.1| lysyl-tRNA ligase [Bordetella holmesii H558]
Length = 504
Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust.
Identities = 260/442 (58%), Positives = 336/442 (76%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF LQD SG +IQ+Y+ +G+++Y FK +DIGDII +G++FK
Sbjct: 71 MLKRVMGKASFATLQDGSG-----RIQIYLDRGTLGEDVYAGFKQWDIGDIIAIEGSVFK 125
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS+ SS +L++KSLRPLP+KF LS+QE++YR RY+DLI+ + TR+ F+ R++
Sbjct: 126 TNKGELSVHASSARLLSKSLRPLPDKFHGLSDQEMRYRQRYVDLIMTDTTRRTFEARSKA 185
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+ IR M + F+EVETP+LH PGGA AKPF+THHN+L+M+M++RIAPELYLKRLI+G
Sbjct: 186 VGGIRQAMLEAGFLEVETPMLHPIPGGAAAKPFVTHHNALDMEMYMRIAPELYLKRLIVG 245
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF+++FEIN+NFRNEG+SPRHNPEFTM+EFYAAY +Y WLM FTE +I++ + G+
Sbjct: 246 GFDRVFEINRNFRNEGVSPRHNPEFTMMEFYAAYADYRWLMDFTESLIRQAAIAAAGSAV 305
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQGR LD SK F++LTI EAI KY P Y + +L + F+++ELKK + K L
Sbjct: 306 LTYQGRELDLSKPFDRLTICEAILKYAPHYTQAELDDTDFVRAELKKFGADVD-KAPLAR 364
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E++LWNPTYI +YP E+SPLAR S+ ITERFELFI G EIA
Sbjct: 365 AGLGALQLALFEETAESQLWNPTYIIDYPVEVSPLARASDT-REGITERFELFITGREIA 423
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF+ Q++ K+ E + YYD DYI ALEYGMPP GCGIG+DRL+
Sbjct: 424 NGFSELNDPEDQAERFRAQVEAKD-AGDEEAMYYDADYIRALEYGMPPTGGCGIGIDRLV 482
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S +IRDVILFPHLR E+
Sbjct: 483 MLLTDSPSIRDVILFPHLRRED 504
>gi|359796140|ref|ZP_09298745.1| lysyl-tRNA synthetase [Achromobacter arsenitoxydans SY8]
gi|359365826|gb|EHK67518.1| lysyl-tRNA synthetase [Achromobacter arsenitoxydans SY8]
Length = 507
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 255/442 (57%), Positives = 336/442 (76%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF LQD S G+IQ+Y+ +G++ Y FK +DIGDII +G++FK
Sbjct: 74 MLKRVMGKASFATLQD-----STGRIQIYLDRGTLGEDNYAAFKQWDIGDIIAVEGSVFK 128
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS+ ++ +L++KSLRPLP+KF +++QE++YR RY+DLI+ + TR+ F+ R++
Sbjct: 129 TNKGELSVHAATARLLSKSLRPLPDKFHGVADQELRYRQRYVDLIMTDATRRTFEARSKA 188
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+ SIR FM F+EVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 189 VGSIRQFMLNAGFLEVETPMLHPIPGGAAAKPFVTHHNALDMEMFLRIAPELYLKRLIVG 248
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FE+N+NFRNEG+SPRHNPEFTM+EFYAA+ +Y WLM FTE++I++ + G+
Sbjct: 249 GFERVFEVNRNFRNEGVSPRHNPEFTMMEFYAAFADYRWLMDFTEELIRQAAISATGSAV 308
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQ R LD SK F++LTI EAI KYT Y + L + F+++ELKK+ + +L+
Sbjct: 309 LTYQERELDLSKPFDRLTICEAILKYTDGYTQAQLDDAAFVRAELKKLGADAD-GPVLSR 367
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E KLWNPTYI +YP E+SPLAR S+ ITERFELF+ G EIA
Sbjct: 368 AGLGALQLALFEETAEAKLWNPTYIIDYPVEVSPLARASDT-REGITERFELFMTGREIA 426
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF++Q++ K+ E + +YD DYI ALEYGMPP GCGIG+DRL+
Sbjct: 427 NGFSELNDPEDQAERFRSQVEAKD-AGDEEAMFYDADYIRALEYGMPPTGGCGIGIDRLV 485
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S +IRDVILFPHLR E+
Sbjct: 486 MLLTDSPSIRDVILFPHLRRED 507
>gi|311107123|ref|YP_003979976.1| lysyl-tRNA synthetase [Achromobacter xylosoxidans A8]
gi|310761812|gb|ADP17261.1| lysyl-tRNA synthetase [Achromobacter xylosoxidans A8]
Length = 507
Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust.
Identities = 254/442 (57%), Positives = 334/442 (75%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF LQD S G+IQ+Y+ +G++ Y FK +DIGDII +G++FK
Sbjct: 74 MLKRVMGKASFATLQD-----STGRIQIYLDRGTLGEDSYAAFKQWDIGDIIAIEGSVFK 128
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS+ +S +L++KSLRPLP+KF +++QE++YR RY+DLI+ + TR+ F+ R++
Sbjct: 129 TNKGELSVHAASARLLSKSLRPLPDKFHGVADQELRYRQRYVDLIMTDATRRTFEARSKA 188
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+ SIR FM F+EVETP+LH PGGA AKPF+THHN+L+M+M+LRIAPELYLKRLI+G
Sbjct: 189 VGSIRQFMLNAGFLEVETPMLHPIPGGAAAKPFVTHHNALDMEMYLRIAPELYLKRLIVG 248
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FE+N+NFRNEG+SPRHNPEFTM+EFYAA+ Y WLM FTE++I++ + G+
Sbjct: 249 GFERVFEVNRNFRNEGVSPRHNPEFTMMEFYAAFAEYRWLMDFTEELIRQAAISATGSAV 308
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ Y R LD SK F++LTI EAI KY P Y + L + F+++ELKK+ + +L+
Sbjct: 309 LTYGERELDLSKPFDRLTICEAILKYAPGYTQAQLDDAAFVRAELKKLGADAD-GPVLSR 367
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E KLWNPTYI +YP E+SPLAR S+ ITERFELF+ G EIA
Sbjct: 368 AGLGALQLALFEETAEAKLWNPTYIIDYPVEVSPLARASDT-REGITERFELFMTGREIA 426
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF++Q++ K+ E + +YD DYI ALEYGMPP GCGIG+DRL+
Sbjct: 427 NGFSELNDPEDQAERFRSQVEAKD-AGDEEAMFYDADYIRALEYGMPPTGGCGIGIDRLV 485
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S +IRDVILFPHLR E+
Sbjct: 486 MLLTDSPSIRDVILFPHLRRED 507
>gi|253999564|ref|YP_003051627.1| lysyl-tRNA synthetase [Methylovorus glucosetrophus SIP3-4]
gi|313201598|ref|YP_004040256.1| lysyl-tRNA synthetase [Methylovorus sp. MP688]
gi|253986243|gb|ACT51100.1| lysyl-tRNA synthetase [Methylovorus glucosetrophus SIP3-4]
gi|312440914|gb|ADQ85020.1| lysyl-tRNA synthetase [Methylovorus sp. MP688]
Length = 504
Score = 567 bits (1460), Expect = e-159, Method: Compositional matrix adjust.
Identities = 267/441 (60%), Positives = 335/441 (75%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF LQD SG +IQL+IS E IG+ LY FK +D+GDI+ A+G +FK
Sbjct: 75 MLKRVMGKASFATLQDKSG-----RIQLFISKESIGEELYDAFKKWDMGDILAARGVVFK 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELSIKVS L+L+TKSLRPLP KF LS+QE KYR RY+DLI++++TR+ F R++I
Sbjct: 130 TKTGELSIKVSELRLLTKSLRPLPEKFHGLSDQETKYRQRYVDLIVSDDTRQTFIARSKI 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+++IR FM N+F+EVETP+LH PGGA AKPFITHHN+L+M+M++RIAPELYLKRLI+G
Sbjct: 190 VAAIRSFMLGNEFLEVETPMLHPIPGGASAKPFITHHNALDMQMYMRIAPELYLKRLIVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+S RHNPEFTM+EFYAAYT+Y WLM FTE I+ + GT
Sbjct: 250 GFERVFEINRNFRNEGVSVRHNPEFTMMEFYAAYTDYKWLMDFTENCIRAAAIAARGTAV 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
++YQGR LD S+ F++LTI+ AI+KY P Y L + FL++ELKK + +
Sbjct: 310 LEYQGRTLDLSQPFQRLTIVGAIQKYAPAYTLEQLNDAAFLRTELKKFG-----VEAFAH 364
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E++LW PTYI +YP E+SPLAR S+ N ITERFELF+ G EIA
Sbjct: 365 AGLGALQLALFEETAESQLWEPTYIIDYPVEVSPLARASDT-NPEITERFELFVTGREIA 423
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RF Q+ K E + + YYD D+I ALEYGMPP GCGIG+DRL+
Sbjct: 424 NGFSELNDAEDQAARFHAQVAAK-EAGDDEAMYYDADFIRALEYGMPPTGGCGIGIDRLV 482
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S +IRDVILFPH+R E
Sbjct: 483 MLLTDSPSIRDVILFPHMRPE 503
>gi|424777068|ref|ZP_18204041.1| lysyl-tRNA ligase [Alcaligenes sp. HPC1271]
gi|422887859|gb|EKU30254.1| lysyl-tRNA ligase [Alcaligenes sp. HPC1271]
Length = 507
Score = 565 bits (1456), Expect = e-158, Method: Compositional matrix adjust.
Identities = 260/442 (58%), Positives = 334/442 (75%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF LQD SG +IQ+Y+ +G+ Y +FK +DIGDI+ +GT+FK
Sbjct: 74 MLKRVMGKASFATLQDASG-----RIQIYLDKAALGEENYAEFKGWDIGDILAVEGTVFK 128
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS+ SS++L+ KSLRPLP+KF L++QE+KYR RY+DLI+ E+TR+ F R+++
Sbjct: 129 TNKGELSVHASSVRLLAKSLRPLPDKFHGLADQELKYRQRYVDLIMGEDTRQTFLARSKV 188
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+SS+R M + +F+EVETP+LH PGGA AKPFITHHN+L+M+M+LRIAPELYLKRLI+G
Sbjct: 189 MSSLRQHMAQANFLEVETPMLHPIPGGASAKPFITHHNALDMEMYLRIAPELYLKRLIVG 248
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE +I++ + GT
Sbjct: 249 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYQWLMDFTENLIREAAISARGTAT 308
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQ R LD S F++LTI AI KY P Y L++ FL++EL ++ N L +
Sbjct: 309 LQYQERELDLSLPFDRLTITGAIMKYAPSYQIEQLEDIQFLRTELARLKVDVNSPP-LRD 367
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E+KLW+PT+I +YP E+SPLAR S+ + ITERFELFI G EIA
Sbjct: 368 AGLGALQLALFEETAESKLWHPTFIVDYPVEVSPLARASDTQ-EGITERFELFITGREIA 426
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF+ Q+ K+ E + +YD DYI ALEYGMPP GCGIG+DRL+
Sbjct: 427 NGFSELNDPEDQAARFQAQVQAKD-AGDEEAMFYDADYIRALEYGMPPTGGCGIGIDRLV 485
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S IRDVILFPHLR E+
Sbjct: 486 MLLTDSPAIRDVILFPHLRRED 507
>gi|319779399|ref|YP_004130312.1| lysyl-tRNA synthetase [Taylorella equigenitalis MCE9]
gi|397661635|ref|YP_006502335.1| lysyl-tRNA synthetase [Taylorella equigenitalis ATCC 35865]
gi|317109423|gb|ADU92169.1| Lysyl-tRNA synthetase (class II) [Taylorella equigenitalis MCE9]
gi|394349814|gb|AFN35728.1| lysyl-tRNA synthetase [Taylorella equigenitalis ATCC 35865]
gi|399115028|emb|CCG17825.1| lysyl-tRNA synthetase [Taylorella equigenitalis 14/56]
Length = 513
Score = 565 bits (1456), Expect = e-158, Method: Compositional matrix adjust.
Identities = 257/442 (58%), Positives = 342/442 (77%), Gaps = 12/442 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF LQD S G+IQ+Y+ + +G Y DFK++DIGDI+G G +FK
Sbjct: 84 MLKRVMGKASFATLQD-----STGRIQVYLDKKHLGDEAYDDFKSWDIGDIVGVSGRVFK 138
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T GELS+ S++LI+KSLRPLP+KF LS+QE++YR RY+DLI+NE+TR+ F+ R+Q
Sbjct: 139 TMKGELSVHAQSIELISKSLRPLPDKFHGLSDQELRYRQRYVDLIMNESTRETFRIRSQA 198
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
++ +R M ++ F+EVETP+LH PGGA AKPF+THHN+L+M M+LR+APELYLKRL++G
Sbjct: 199 MTHLRQIMSEHGFLEVETPMLHPIPGGATAKPFVTHHNALDMDMYLRVAPELYLKRLVVG 258
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF+++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y W+M FTEK++++I + +G+ +
Sbjct: 259 GFDRVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYEWMMDFTEKLLREIAVRTLGSAQ 318
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+QGR L F + FE+LT++EAI KY +Y E LQ+ F+++EL + + L++
Sbjct: 319 FFHQGRALSFEEPFERLTMVEAILKYCDKYTEAQLQDADFIRNELIAL-----KAPALDS 373
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
+ LQL LFEET E+ LWNPT+I +YP E+SPLAR S+ N++ITERFELFI G EIA
Sbjct: 374 MGLGALQLALFEETVESLLWNPTFIVDYPVEVSPLARASDA-NHDITERFELFITGREIA 432
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+QS RF Q+ K+ E + YYD+DYI ALEYGMP A GCGIG+DRL+
Sbjct: 433 NGFSELNDPEDQSARFMEQVKAKD-AGDEEAMYYDSDYIRALEYGMPYAGGCGIGIDRLM 491
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S IRDV+LFPHLR E+
Sbjct: 492 MLLTDSSTIRDVLLFPHLRKED 513
>gi|421484281|ref|ZP_15931852.1| lysyl-tRNA ligase [Achromobacter piechaudii HLE]
gi|400197490|gb|EJO30455.1| lysyl-tRNA ligase [Achromobacter piechaudii HLE]
Length = 507
Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust.
Identities = 253/442 (57%), Positives = 334/442 (75%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF LQD S G+IQ+Y+ +G++ Y FK +DIGDII +G++FK
Sbjct: 74 MLKRVMGKASFATLQD-----STGRIQIYLDRGTLGEDNYAAFKQWDIGDIIAIEGSVFK 128
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS+ ++ +L++KSLRPLP+KF +++QE++YR RY+DLI+ + TR+ F+ R++
Sbjct: 129 TNKGELSVHAATARLLSKSLRPLPDKFHGVADQELRYRQRYVDLIMTDATRRTFEARSKA 188
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+ SIR FM F+EVETP+LH PGGA AKPF+THHN+L+M+M+LRIAPELYLKRLI+G
Sbjct: 189 VGSIRQFMLNAGFLEVETPMLHPIPGGAAAKPFVTHHNALDMEMYLRIAPELYLKRLIVG 248
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FE+N+NFRNEG+SPRHNPEFTM+EFYAA+ Y WLM FTE++I++ + G+
Sbjct: 249 GFERVFEVNRNFRNEGVSPRHNPEFTMMEFYAAFAEYRWLMDFTEELIRQAAISATGSAV 308
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ Y R LD SK F++LTI EAI KY P Y + L + F+++ELKK+ + +L+
Sbjct: 309 LTYGERELDLSKPFDRLTICEAILKYAPGYTQAQLDDAAFVRAELKKLGADAD-GPVLSR 367
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E KLWNPTYI +YP E+SPLAR S+ ITERFELF+ G EIA
Sbjct: 368 AGLGALQLALFEETAEAKLWNPTYIIDYPVEVSPLARASDT-REGITERFELFMTGREIA 426
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF++Q++ K+ E + +YD DYI ALEYGMPP GCGIG+DRL+
Sbjct: 427 NGFSELNDPEDQAERFRSQVEAKD-AGDEEAMFYDADYIRALEYGMPPTGGCGIGIDRLV 485
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S +IRDVILFPHLR E+
Sbjct: 486 MLLTDSPSIRDVILFPHLRRED 507
>gi|163857080|ref|YP_001631378.1| lysyl-tRNA synthetase [Bordetella petrii DSM 12804]
gi|226710883|sp|A9IQY2.1|SYK_BORPD RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|163260808|emb|CAP43110.1| lysyl-tRNA synthetase [Bordetella petrii]
Length = 506
Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust.
Identities = 253/442 (57%), Positives = 330/442 (74%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ+Y+ +G Y FK +DIGDII +G++FK
Sbjct: 73 MLKRVMGKASFATVQDGSG-----RIQIYLDRGTLGDEAYAAFKQWDIGDIIAIEGSVFK 127
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS+ ++ +L++KSLRPLP+KF +++QE++YR RY+DLI+ + TR+ F+ R++
Sbjct: 128 TNKGELSVHAATARLLSKSLRPLPDKFHGVADQELRYRQRYVDLIMTDATRRTFETRSKA 187
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+ SIR M F+EVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 188 VGSIRQVMLDAGFLEVETPMLHPIPGGAAAKPFVTHHNALDMEMFLRIAPELYLKRLIVG 247
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAY +Y WLM FTE ++++ + G+
Sbjct: 248 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYADYRWLMDFTEHVLRQAAIAATGSAV 307
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQ R LD S+ F++LTI EAI KY P Y + L + F+++ELKK+ + +L
Sbjct: 308 LTYQDRELDLSRPFDRLTICEAILKYAPAYTQAQLDDAAFVRAELKKLGADVD-GPVLAR 366
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E +LWNPTYI +YP E+SPLAR S+ ITERFELF+ G EIA
Sbjct: 367 AGLGALQLALFEETAEAQLWNPTYIIDYPVEVSPLARASDT-RPGITERFELFMTGREIA 425
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF+ Q++ K+ E + Y+D DYI ALEYGMPP GCGIG+DRL+
Sbjct: 426 NGFSELNDPEDQAERFRAQVEAKD-AGDEEAMYFDADYIRALEYGMPPTGGCGIGIDRLV 484
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLTNS +IRDVILFPHLR E+
Sbjct: 485 MLLTNSPSIRDVILFPHLRRED 506
>gi|348590021|ref|YP_004874483.1| lysyl-tRNA synthetase [Taylorella asinigenitalis MCE3]
gi|347973925|gb|AEP36460.1| Lysyl-tRNA synthetase (class II) [Taylorella asinigenitalis MCE3]
Length = 508
Score = 563 bits (1452), Expect = e-158, Method: Compositional matrix adjust.
Identities = 261/442 (59%), Positives = 343/442 (77%), Gaps = 12/442 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF LQD+SG +IQ+Y+ + +G Y +FK++DIGDIIG G +FK
Sbjct: 79 MLKRVMGKASFATLQDSSG-----RIQVYLDKKHLGDEAYDEFKSWDIGDIIGVSGRVFK 133
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T GELS+ S++LI+KSLRPLP+KF LS+QE++YR RY+DLI+NE+TR+ F R++
Sbjct: 134 TMKGELSVHAQSVELISKSLRPLPDKFHGLSDQELRYRQRYVDLIMNESTRETFIVRSKA 193
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+S +R M +N F+EVETP+LH PGGA AKPF+THHN+L+M M+LR+APELYLKRL++G
Sbjct: 194 MSHLRQIMTENGFLEVETPMLHPIPGGATAKPFVTHHNALDMDMYLRVAPELYLKRLVVG 253
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y W+M FTEK+++++ + +G+ +
Sbjct: 254 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYEWMMDFTEKILREVAVRTLGSAQ 313
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I +QGR L+F + FE+LT++EAI KY QY E L++ F++SEL + +
Sbjct: 314 IMHQGRPLNFDEPFERLTMVEAILKYCHQYTEEQLKDPDFIRSELIAL-----KAPAAEG 368
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LK LQL LFEETTE++LWNPT+I +YP E+SPLAR S+ ++ ITERFELFI G EIA
Sbjct: 369 LKLGALQLALFEETTESQLWNPTFIIDYPVEVSPLARASDT-DSEITERFELFITGREIA 427
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+QS RF Q+ K+ E + YYD+DYI ALEYGMP A GCGIG+DRLI
Sbjct: 428 NGFSELNDPEDQSARFMEQVKAKD-AGDEEAMYYDSDYIRALEYGMPYAGGCGIGIDRLI 486
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S +IRDV+LFPHLR E+
Sbjct: 487 MLLTDSSSIRDVLLFPHLRKED 508
>gi|91775150|ref|YP_544906.1| lysyl-tRNA synthetase [Methylobacillus flagellatus KT]
gi|123380554|sp|Q1H372.1|SYK_METFK RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|91709137|gb|ABE49065.1| lysyl-tRNA synthetase [Methylobacillus flagellatus KT]
Length = 509
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 266/442 (60%), Positives = 339/442 (76%), Gaps = 12/442 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ++I+ E +G+ Y FK +D+GDII A+GTLFK
Sbjct: 80 MLKRVMGKASFATVQDRSG-----RIQIFITRENVGEATYDAFKKWDLGDIIAARGTLFK 134
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+KVS L+L+TKSLRPLP KF L++QE KYR RY+DLI++E TRK F R++I
Sbjct: 135 TKTGELSVKVSELRLLTKSLRPLPEKFHGLADQETKYRQRYVDLIVSEETRKTFVARSKI 194
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+++IR FM ++F+EVETP+LH PGGA AKPFITHHN+L+++M++RIAPELYLKRL++G
Sbjct: 195 VAAIRAFMLSHEFLEVETPMLHPIPGGAAAKPFITHHNALDLQMYMRIAPELYLKRLVVG 254
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+S RHNPEFTM+EFYAAYT+Y WLM FTE I+ + G+
Sbjct: 255 GFERVFEINRNFRNEGLSVRHNPEFTMMEFYAAYTDYKWLMDFTESCIRAAAIAACGSAV 314
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
++YQGR LD K FE+LTII AI+KY PQY L ++ FL+ ELKK + L +
Sbjct: 315 VEYQGRELDLGKPFERLTIIGAIQKYAPQYTLEQLSDQAFLRQELKKFG-----VEALPH 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
L LQL LFEET E++LWNPTYI +YP E+SPLAR S+ + +ITER+ELFI G EIA
Sbjct: 370 LGLGALQLALFEETAESQLWNPTYIIDYPVEVSPLARASD-SDPSITERYELFITGREIA 428
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RF Q+ K E + + YYD D+I ALEYGMPP GCGIG+DRL+
Sbjct: 429 NGFSELNDAEDQAARFHAQVAAK-EAGDDEAMYYDGDFIRALEYGMPPTGGCGIGIDRLV 487
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S +IRDVILFPH+R E+
Sbjct: 488 MLLTDSPSIRDVILFPHMRPEH 509
>gi|399116848|emb|CCG19659.1| lysyl-tRNA synthetase [Taylorella asinigenitalis 14/45]
Length = 508
Score = 560 bits (1443), Expect = e-157, Method: Compositional matrix adjust.
Identities = 260/442 (58%), Positives = 342/442 (77%), Gaps = 12/442 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF LQD+SG +IQ+Y+ + +G Y +FK++DIGDIIG G +FK
Sbjct: 79 MLKRVMGKASFATLQDSSG-----RIQVYLDKKHLGDEAYDEFKSWDIGDIIGVSGRVFK 133
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T GELS+ S++LI+KSLRPLP+KF LS+QE++YR RY+DLI+NE+TR+ F R++
Sbjct: 134 TMKGELSVHAQSVELISKSLRPLPDKFHGLSDQELRYRQRYVDLIMNESTRETFIVRSKA 193
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+S +R M +N F+EVETP+LH PGGA AKPF+THHN+L+M M+LR+APELYLKRL++G
Sbjct: 194 MSHLRQIMTENGFLEVETPMLHPIPGGATAKPFVTHHNALDMDMYLRVAPELYLKRLVVG 253
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y W+M FTEK+++++ + +G+ +
Sbjct: 254 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYEWMMDFTEKILREVAVRTLGSAQ 313
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I +QGR L+F + FE+LT++EAI KY QY L++ F++SEL + +
Sbjct: 314 IMHQGRPLNFDEPFERLTMVEAILKYCHQYTVEQLKDPDFIRSELIAL-----KAPAAEC 368
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LK LQL LFEETTE++LWNPT+I +YP E+SPLAR S+ ++ ITERFELFI G EIA
Sbjct: 369 LKLGALQLALFEETTESQLWNPTFIIDYPVEVSPLARASDT-DSEITERFELFITGREIA 427
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+QS RF Q+ K+ E + YYD+DYI ALEYGMP A GCGIG+DRLI
Sbjct: 428 NGFSELNDPEDQSARFMEQVKAKD-AGDEEAMYYDSDYIRALEYGMPYAGGCGIGIDRLI 486
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S +IRDV+LFPHLR E+
Sbjct: 487 MLLTDSSSIRDVLLFPHLRKED 508
>gi|358637217|dbj|BAL24514.1| lysyl-tRNA synthetase class II [Azoarcus sp. KH32C]
Length = 502
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 257/441 (58%), Positives = 342/441 (77%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SFI +QD SG +IQLY++ + +G+++Y +FK++DIGDI+GA GTLFK
Sbjct: 74 MLKRVMGKASFITIQDISG-----RIQLYVTRDAVGEDVYAEFKHWDIGDIVGAAGTLFK 128
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+KV+ L+L+TKSLRPLP+KF L++ E KYR RY+DLI++E TR F R+++
Sbjct: 129 TRTGELSVKVTELRLLTKSLRPLPDKFHGLTDVEQKYRQRYVDLIMSEQTRFTFVARSRM 188
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+ SIR++M + F+EVETP++H PGGA AKPF+THHN+L+M++FLRIAPELYLKRL++G
Sbjct: 189 VQSIRNYMVNHGFLEVETPMMHPIPGGASAKPFVTHHNALDMELFLRIAPELYLKRLVVG 248
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF K+FE+N+NFRNEG+SPRHNPEFTM+EFY AY +Y LM FTE ++++ + +GT
Sbjct: 249 GFEKVFEVNRNFRNEGLSPRHNPEFTMMEFYEAYADYRSLMNFTEGLLRQAAREALGTEV 308
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
YQGR LD SK F +LTI+EAI+KY P ++ L + +L+ +LK + + ++ L +
Sbjct: 309 FVYQGRELDLSKPFARLTIVEAIRKYHPGFSVEQLNDAEWLRKKLKDLGAEARERAGLGS 368
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL++FEETTE +LW PT+I +YP E+SPLAR+ N EN ITERFELFI+G EIA
Sbjct: 369 -----LQLLMFEETTEAQLWEPTFIIDYPAEVSPLARR-NDENPEITERFELFIVGREIA 422
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF Q+ K E E + Y+D DYI ALEYG+PP GCGIG+DRL+
Sbjct: 423 NGFSELNDPEDQAARFLEQVKAK-EAGDEEAMYFDADYIRALEYGLPPTGGCGIGIDRLV 481
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S +IRDVILFP +R E
Sbjct: 482 MLLTDSPSIRDVILFPQMRME 502
>gi|410420587|ref|YP_006901036.1| lysyl-tRNA synthetase [Bordetella bronchiseptica MO149]
gi|412337459|ref|YP_006966214.1| lysyl-tRNA synthetase [Bordetella bronchiseptica 253]
gi|427819363|ref|ZP_18986426.1| lysyl-tRNA synthetase [Bordetella bronchiseptica D445]
gi|427821947|ref|ZP_18989009.1| lysyl-tRNA synthetase [Bordetella bronchiseptica Bbr77]
gi|408447882|emb|CCJ59559.1| lysyl-tRNA synthetase [Bordetella bronchiseptica MO149]
gi|408767293|emb|CCJ52039.1| lysyl-tRNA synthetase [Bordetella bronchiseptica 253]
gi|410570363|emb|CCN18535.1| lysyl-tRNA synthetase [Bordetella bronchiseptica D445]
gi|410587212|emb|CCN02245.1| lysyl-tRNA synthetase [Bordetella bronchiseptica Bbr77]
Length = 506
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 253/442 (57%), Positives = 327/442 (73%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF LQD SG +IQ+Y+ +G+ Y FK +DIGDII +G +FK
Sbjct: 73 MLKRVMGKASFATLQDGSG-----RIQIYLERGTLGEEAYAAFKQWDIGDIIAIEGPVFK 127
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS+ +S +L++KSLRPLP+KF +++QE++YR RY+DLI+ + TR+ F+ R++
Sbjct: 128 TNKGELSVHANSARLLSKSLRPLPDKFHGVADQELRYRQRYVDLIMTDATRRTFEARSKA 187
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+ IR M F+EVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 188 VGGIRQAMLNAGFLEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPELYLKRLIVG 247
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAY +Y WLM FTE +I++ + G+
Sbjct: 248 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYADYRWLMDFTEDLIRQAAIAATGSAV 307
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQ R LD S+ F++LTI EAI KY Y + L + F+++EL+K+ + L
Sbjct: 308 LSYQDRELDLSQPFDRLTICEAILKYAEGYTQAQLDDPAFVRAELRKLGANVDGPP-LAR 366
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E KLW PTYI +YP E+SPLAR S+ + ITERFELFI G EIA
Sbjct: 367 AGLGALQLALFEETAEAKLWRPTYIIDYPVEVSPLARASDT-RDGITERFELFITGREIA 425
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF+ Q++ K+ E + Y+D DYI ALEYGMPP GCGIG+DRL+
Sbjct: 426 NGFSELNDPEDQAERFRAQVEAKD-AGDEEAMYFDADYIRALEYGMPPTGGCGIGIDRLV 484
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S +IRDVILFPHLR E+
Sbjct: 485 MLLTDSPSIRDVILFPHLRRED 506
>gi|427815080|ref|ZP_18982144.1| lysyl-tRNA synthetase [Bordetella bronchiseptica 1289]
gi|410566080|emb|CCN23640.1| lysyl-tRNA synthetase [Bordetella bronchiseptica 1289]
Length = 506
Score = 556 bits (1434), Expect = e-156, Method: Compositional matrix adjust.
Identities = 253/442 (57%), Positives = 327/442 (73%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF LQD SG +IQ+Y+ +G+ Y FK +DIGDII +G +FK
Sbjct: 73 MLKRVMGKASFATLQDGSG-----RIQIYLERGTLGEEAYAAFKQWDIGDIIAIEGPVFK 127
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS+ +S +L++KSLRPLP+KF +++QE++YR RY+DLI+ + TR+ F+ R++
Sbjct: 128 TNKGELSVHANSARLLSKSLRPLPDKFHGVADQELRYRQRYVDLIMTDATRRTFEARSKA 187
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+ IR M F+EVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 188 VGGIRQAMLNAGFLEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPELYLKRLIVG 247
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAY +Y WLM FTE +I++ + G+
Sbjct: 248 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYADYRWLMDFTEDLIRQAAIAATGSAV 307
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQ R LD S+ F++LTI EAI KY Y + L + F+++EL+K+ + L
Sbjct: 308 LSYQDRELDLSQPFDRLTICEAILKYAEGYTQAQLDDPAFVRAELRKLGANV-EGPPLAR 366
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E KLW PTYI +YP E+SPLAR S+ + ITERFELFI G EIA
Sbjct: 367 AGLGALQLALFEETAEAKLWRPTYIIDYPVEVSPLARASDT-RDGITERFELFITGREIA 425
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF+ Q++ K+ E + Y+D DYI ALEYGMPP GCGIG+DRL+
Sbjct: 426 NGFSELNDPEDQAERFRAQVEAKD-AGDEEAMYFDADYIRALEYGMPPTGGCGIGIDRLV 484
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S +IRDVILFPHLR E+
Sbjct: 485 MLLTDSPSIRDVILFPHLRRED 506
>gi|33592239|ref|NP_879883.1| lysyl-tRNA synthetase [Bordetella pertussis Tohama I]
gi|384203542|ref|YP_005589281.1| lysyl-tRNA synthetase [Bordetella pertussis CS]
gi|408416147|ref|YP_006626854.1| lysyl-tRNA synthetase [Bordetella pertussis 18323]
gi|39932123|sp|Q7VZ37.1|SYK_BORPE RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|33571884|emb|CAE41400.1| lysyl-tRNA synthetase [Bordetella pertussis Tohama I]
gi|332381656|gb|AEE66503.1| lysyl-tRNA synthetase [Bordetella pertussis CS]
gi|401778317|emb|CCJ63720.1| lysyl-tRNA synthetase [Bordetella pertussis 18323]
Length = 506
Score = 556 bits (1434), Expect = e-156, Method: Compositional matrix adjust.
Identities = 253/442 (57%), Positives = 327/442 (73%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF LQD SG +IQ+Y+ +G+ Y FK +DIGDII +G +FK
Sbjct: 73 MLKRVMGKASFATLQDGSG-----RIQIYLERGTLGEEAYAAFKQWDIGDIIAIEGPVFK 127
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS+ +S +L++KSLRPLP+KF +++QE++YR RY+DLI+ + TR+ F+ R++
Sbjct: 128 TNKGELSVHANSARLLSKSLRPLPDKFHGVADQELRYRQRYVDLIMTDATRRTFEARSKA 187
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+ IR M F+EVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 188 VGGIRQAMLNAGFLEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPELYLKRLIVG 247
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAY +Y WLM FTE +I++ + G+
Sbjct: 248 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYADYRWLMDFTEDLIRQAAIAATGSAV 307
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQ R LD S+ F++LTI EAI KY Y + L + F+++EL+K+ + L
Sbjct: 308 LSYQDRELDLSQPFDRLTICEAILKYAEGYTQAQLDDPAFVRAELRKLGANV-EGPPLAR 366
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E KLW PTYI +YP E+SPLAR S+ + ITERFELFI G EIA
Sbjct: 367 AGLGALQLALFEETAEAKLWRPTYIIDYPVEVSPLARASDT-RDGITERFELFITGREIA 425
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF+ Q++ K+ E + Y+D DYI ALEYGMPP GCGIG+DRL+
Sbjct: 426 NGFSELNDPEDQAERFRAQVEAKD-AGDEEAMYFDADYIRALEYGMPPTGGCGIGIDRLV 484
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S +IRDVILFPHLR E+
Sbjct: 485 MLLTDSPSIRDVILFPHLRRED 506
>gi|33601276|ref|NP_888836.1| lysyl-tRNA synthetase [Bordetella bronchiseptica RB50]
gi|39932139|sp|Q7WK46.1|SYK_BORBR RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|33575711|emb|CAE32789.1| lysyl-tRNA synthetase [Bordetella bronchiseptica RB50]
Length = 506
Score = 556 bits (1432), Expect = e-156, Method: Compositional matrix adjust.
Identities = 253/442 (57%), Positives = 327/442 (73%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF LQD SG +IQ+Y+ +G+ Y FK +DIGDII +G +FK
Sbjct: 73 MLKRVMGKASFATLQDGSG-----RIQIYLERGTLGEEAYAAFKQWDIGDIIAIEGPVFK 127
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS+ +S +L++KSLRPLP+KF +++QE++YR RY+DLI+ + TR+ F+ R++
Sbjct: 128 TNKGELSVHANSARLLSKSLRPLPDKFHGVADQELRYRQRYVDLIMTDATRRTFEARSKA 187
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+ IR M F+EVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 188 VGGIRQTMLNAGFLEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPELYLKRLIVG 247
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAY +Y WLM FTE +I++ + G+
Sbjct: 248 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYADYRWLMDFTEDLIRQAAIAATGSAV 307
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQ R LD S+ F++LTI EAI KY Y + L + F+++EL+K+ + L
Sbjct: 308 LSYQDRELDLSQPFDRLTICEAILKYAEGYTQAQLDDPAFVRAELRKLGANV-EGPPLAR 366
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E KLW PTYI +YP E+SPLAR S+ + ITERFELFI G EIA
Sbjct: 367 AGLGALQLALFEETAEAKLWRPTYIIDYPVEVSPLARASDT-RDGITERFELFITGREIA 425
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF+ Q++ K+ E + Y+D DYI ALEYGMPP GCGIG+DRL+
Sbjct: 426 NGFSELNDPEDQAERFRAQVEAKD-AGDEEAMYFDADYIRALEYGMPPTGGCGIGIDRLV 484
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S +IRDVILFPHLR E+
Sbjct: 485 MLLTDSPSIRDVILFPHLRRED 506
>gi|410472821|ref|YP_006896102.1| lysyl-tRNA synthetase [Bordetella parapertussis Bpp5]
gi|408442931|emb|CCJ49504.1| lysyl-tRNA synthetase [Bordetella parapertussis Bpp5]
Length = 506
Score = 556 bits (1432), Expect = e-155, Method: Compositional matrix adjust.
Identities = 253/442 (57%), Positives = 327/442 (73%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF LQD SG +IQ+Y+ +G+ Y FK +DIGDII +G +FK
Sbjct: 73 MLKRVMGKASFATLQDGSG-----RIQIYLERGTLGEEAYAAFKQWDIGDIIAIEGPVFK 127
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS+ +S +L++KSLRPLP+KF +++QE++YR RY+DLI+ + TR+ F+ R++
Sbjct: 128 TNKGELSVHANSARLLSKSLRPLPDKFHGVADQELRYRQRYVDLIMTDATRRTFEARSKA 187
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+ IR M F+EVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 188 VGGIRQAMLNVGFLEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPELYLKRLIVG 247
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAY +Y WLM FTE +I++ + G+
Sbjct: 248 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYADYRWLMDFTEDLIRQAAIAATGSAV 307
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQ R LD S+ F++LTI EAI KY Y + L + F+++EL+K+ + L
Sbjct: 308 LSYQDRELDLSQPFDRLTICEAILKYAEGYTQAQLDDPAFVRAELRKLGANV-EGPPLAR 366
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E KLW PTYI +YP E+SPLAR S+ + ITERFELFI G EIA
Sbjct: 367 AGLGALQLALFEETAEAKLWRPTYIIDYPVEVSPLARASDT-RDGITERFELFITGREIA 425
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF+ Q++ K+ E + Y+D DYI ALEYGMPP GCGIG+DRL+
Sbjct: 426 NGFSELNDPEDQAERFRAQVEAKD-AGDEEAMYFDADYIRALEYGMPPTGGCGIGIDRLV 484
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S +IRDVILFPHLR E+
Sbjct: 485 MLLTDSPSIRDVILFPHLRRED 506
>gi|253997053|ref|YP_003049117.1| lysyl-tRNA synthetase [Methylotenera mobilis JLW8]
gi|253983732|gb|ACT48590.1| lysyl-tRNA synthetase [Methylotenera mobilis JLW8]
Length = 516
Score = 555 bits (1430), Expect = e-155, Method: Compositional matrix adjust.
Identities = 258/445 (57%), Positives = 335/445 (75%), Gaps = 16/445 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEII----GKNLYTDFKNYDIGDIIGAKG 56
MLKRVMGK SF +QD S G+IQL++S + + +Y FK++D+GDII AKG
Sbjct: 83 MLKRVMGKASFATVQD-----STGRIQLFVSKDNFTDENSEAVYEAFKHWDLGDIIAAKG 137
Query: 57 TLFKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKK 116
LFKT TGELS+KVS L+L+TKSLRPLP KF L +QE+KYR RY+DL+++E TR F
Sbjct: 138 VLFKTKTGELSVKVSELRLLTKSLRPLPEKFHGLQDQEVKYRQRYVDLMVSEETRATFMA 197
Query: 117 RTQIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKR 176
R++++S+IR FM +N F+EVETP+LH PGGA AKPFITHHN+L+M+M++RIAPELYLKR
Sbjct: 198 RSKVVSAIRSFMLENQFLEVETPMLHPIPGGASAKPFITHHNALDMQMYMRIAPELYLKR 257
Query: 177 LIIGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCI 236
L++GGF ++FE+N+NFRNEG+S RHNPEFTM+EFYAAYT+Y+WLM FTE+ I+ +
Sbjct: 258 LVVGGFERVFEVNRNFRNEGLSVRHNPEFTMMEFYAAYTDYLWLMDFTERCIRAAAIAAT 317
Query: 237 GTTKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKK 296
G+ + YQGR LD SK F++LTI+ AI+KY PQY L + FL++E+ K K
Sbjct: 318 GSAVLQYQGRELDLSKPFQRLTIVGAIQKYAPQYTLEQLNDANFLRAEILKFG-----TK 372
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
++ LQL LFEET E++LW PTYI +YP E+SPLAR S+ +N ITERFELF+ G
Sbjct: 373 PFDHAGLGALQLALFEETAESQLWEPTYIIDYPVEVSPLARASD-KNPEITERFELFVTG 431
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
EIANGFSELND E+Q+ RF Q+ K + E + YYD D+I ALEYGMPP GCGIG+
Sbjct: 432 REIANGFSELNDAEDQAARFHAQMKAKEAGDAE-AMYYDADFIRALEYGMPPTGGCGIGI 490
Query: 417 DRLIMLLTNSKNIRDVILFPHLRNE 441
DRL+M++T+S +IRDVILFPH+R E
Sbjct: 491 DRLVMMITDSPSIRDVILFPHMRPE 515
>gi|429462865|ref|YP_007184328.1| lysyl-tRNA synthetase [Candidatus Kinetoplastibacterium crithidii
(ex Angomonas deanei ATCC 30255)]
gi|451811388|ref|YP_007447843.1| class II lysyl-tRNA synthetase [Candidatus Kinetoplastibacterium
crithidii TCC036E]
gi|429338379|gb|AFZ82802.1| lysyl-tRNA synthetase [Candidatus Kinetoplastibacterium crithidii
(ex Angomonas deanei ATCC 30255)]
gi|451776546|gb|AGF47545.1| class II lysyl-tRNA synthetase [Candidatus Kinetoplastibacterium
crithidii TCC036E]
Length = 507
Score = 555 bits (1430), Expect = e-155, Method: Compositional matrix adjust.
Identities = 271/441 (61%), Positives = 338/441 (76%), Gaps = 7/441 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR+MG SF LQD S +IQLY+ + IG ++Y +FK +DIGDI+ +G +FK
Sbjct: 74 MLKRIMGAASFASLQD-----STARIQLYLDKKKIGNDVYQEFKQFDIGDIVYVEGIMFK 128
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN ELS+ VSS+K+I+K++RP+P+KF ++NQ IKYR RY+DLII+E+TR+ FK R+ +
Sbjct: 129 TNKDELSVHVSSIKIISKAIRPMPDKFHGIANQNIKYRQRYLDLIISEDTRQTFKTRSDV 188
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+ IR M ++ FMEVETP+LH PGGA AKPF+THHNSLNM M+LRIAPELYLKRLIIG
Sbjct: 189 INYIRQHMHESSFMEVETPMLHVIPGGAAAKPFVTHHNSLNMDMYLRIAPELYLKRLIIG 248
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FE+N+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE +IKK ++ +K
Sbjct: 249 GFERVFELNRNFRNEGVSPRHNPEFTMMEFYAAYTDYNWLMDFTEDLIKKTVLLIHKDSK 308
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I+YQ + LDFSK FEK++I +AI KY PQYN L NK FL SE+ K+N K N + L
Sbjct: 309 IEYQDKQLDFSKEFEKISICQAICKYNPQYNYNSLNNKEFLYSEIIKLNNKINIEN-LQT 367
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
+ LQL LFEETTE+K+W PTYI +YPTE SPLA++SN I ERFELFI G EIA
Sbjct: 368 ISLGYLQLYLFEETTESKIWEPTYIIDYPTETSPLAKQSN-SRPQIAERFELFIAGREIA 426
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPEEQ RF +Q++ KN E S + D DY+ +LEYGMPP GCGIG+DRL+
Sbjct: 427 NGFSELNDPEEQLQRFLDQVNKKNINIEEESLFLDLDYVKSLEYGMPPTGGCGIGIDRLL 486
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLTN NIRDVILFPH+R E
Sbjct: 487 MLLTNKNNIRDVILFPHMRPE 507
>gi|33596660|ref|NP_884303.1| lysyl-tRNA synthetase [Bordetella parapertussis 12822]
gi|39932130|sp|Q7W8T6.1|SYK_BORPA RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|33573361|emb|CAE37345.1| lysyl-tRNA synthetase [Bordetella parapertussis]
Length = 506
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 252/442 (57%), Positives = 325/442 (73%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF LQD SG +IQ+Y+ +G+ Y FK +DIGDII +G +FK
Sbjct: 73 MLKRVMGKASFATLQDGSG-----RIQIYLERGTLGEEAYAAFKQWDIGDIIAIEGPVFK 127
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS+ +S +L++KSLRPLP+KF +++QE++YR RY+DLI+ + TR+ F+ R++
Sbjct: 128 TNKGELSVHANSARLLSKSLRPLPDKFHGVADQELRYRQRYVDLIMTDATRRTFEARSKA 187
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+ IR M F EVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 188 VGGIRQAMLNAGFFEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPELYLKRLIVG 247
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAY +Y WLM FTE +I++ + G+
Sbjct: 248 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYADYRWLMDFTEDLIRQAAIAATGSAV 307
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQ R LD S+ F+ LTI EAI KY Y + L + F+++EL+K+ + L
Sbjct: 308 LSYQDRELDLSQPFDHLTICEAILKYAEGYTQAQLDDPAFVRAELRKLGANV-EGPPLAR 366
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E +LW PTYI +YP E+SPLAR S+ + ITERFELFI G EIA
Sbjct: 367 AGLGALQLALFEETAEARLWRPTYIIDYPVEVSPLARASDT-RDGITERFELFITGREIA 425
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF+ Q++ K+ E + Y+D DYI ALEYGMPP GCGIG+DRL+
Sbjct: 426 NGFSELNDPEDQAERFRAQVEAKD-AGDEEAMYFDADYIRALEYGMPPTGGCGIGIDRLV 484
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S +IRDVILFPHLR E+
Sbjct: 485 MLLTDSPSIRDVILFPHLRRED 506
>gi|226941342|ref|YP_002796416.1| lysyl-tRNA synthetase [Laribacter hongkongensis HLHK9]
gi|254782474|sp|C1DB68.1|SYK_LARHH RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|226716269|gb|ACO75407.1| Syk [Laribacter hongkongensis HLHK9]
Length = 503
Score = 553 bits (1424), Expect = e-155, Method: Compositional matrix adjust.
Identities = 250/441 (56%), Positives = 338/441 (76%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD+SG +IQ YIS + +G+++Y DFK +D+GDI+GAKGTL K
Sbjct: 75 MLKRVMGKASFATVQDSSG-----RIQFYISRDKVGEDVYADFKTWDMGDILGAKGTLMK 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS++VS L+L++KSLRPLP+KF L++QE KYR RY+DLIIN+++R F KR++I
Sbjct: 130 TKTGELSVEVSELRLLSKSLRPLPDKFHGLADQEQKYRQRYVDLIINQDSRDTFIKRSKI 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+ ++R M D++EVETP++H PGGA AKPF+THHN+L+M ++LRIAPELYLKRL++G
Sbjct: 190 VQTVREVMVGEDYLEVETPMMHPIPGGAAAKPFVTHHNALDMPLYLRIAPELYLKRLVVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN+NFRNEG+S RHNPEFTMIEFY AY Y +M+ TEK+I++ GTTK
Sbjct: 250 GLERVFEINRNFRNEGMSTRHNPEFTMIEFYEAYCGYERMMEMTEKIIRRCAEAACGTTK 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ Y G+ +D K F++ TI+ AIK Y PQY + L ++ +LKSE+K + K + +
Sbjct: 310 VTYNGKEVDLGKPFDRFTIVGAIKHYNPQYTDEQLADEAWLKSEIKALGGKLPPAPGIGS 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEE E KLWNPT+I +YP E+SPLAR S+ + +ITERFELFI+G E A
Sbjct: 370 -----LQLALFEECAEGKLWNPTFIIDYPVEVSPLARGSDA-DPSITERFELFIVGREHA 423
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RF++Q++ K+ + E + +YD DYI A+EYG+PP GCGIG+DRL+
Sbjct: 424 NGYSELNDPEDQAARFRSQVEQKDAGDDE-AMHYDADYIRAMEYGLPPTGGCGIGIDRLV 482
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT++ +IRDVILFPH+R E
Sbjct: 483 MLLTDAPSIRDVILFPHMRPE 503
>gi|56479345|ref|YP_160934.1| lysyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
gi|81356212|sp|Q5NY31.1|SYK_AROAE RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|56315388|emb|CAI10033.1| Lysyl-tRNA synthetase (class II) [Aromatoleum aromaticum EbN1]
Length = 502
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 255/441 (57%), Positives = 336/441 (76%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF+ +QD SG +IQLY++ + +G+++Y DFK++DIGDI+GA GTLFK
Sbjct: 74 MLKRVMGKASFMTIQDLSG-----QIQLYVTRDAVGEDVYADFKHWDIGDIVGAVGTLFK 128
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+K + ++L+TKSLRPLP+KF L++ E KYR R++DLI+NE TR F R+++
Sbjct: 129 TRTGELSVKCTDIRLLTKSLRPLPDKFHGLTDVEQKYRQRHLDLIMNEQTRFTFVARSRM 188
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+ SIR++M + F+EVETP++H PGGA AKPF THHN+L+M++FLRIAPELYLKRL++G
Sbjct: 189 VQSIRNYMVSHGFLEVETPMMHPIPGGAAAKPFTTHHNALDMELFLRIAPELYLKRLVVG 248
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF K+FE+N+NFRNEG+SPRHNPEFTM+EFY AY NY LM FTE ++++ + +GT
Sbjct: 249 GFEKVFEVNRNFRNEGLSPRHNPEFTMMEFYEAYANYKSLMNFTEGLLRQAAREALGTEV 308
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
YQGR LD SK F +LTI+EAI ++ P ++ L ++ +L+++L + K L
Sbjct: 309 FVYQGRELDLSKPFARLTIVEAIHQFHPGFSIAQLNDEAWLRAKLTDLKAKLRDDAGLGT 368
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQLMLFEETTE +LW PT+I +YP E+SPLAR+ N N ITERFELFI+G EIA
Sbjct: 369 -----LQLMLFEETTEAELWEPTFIIDYPAEVSPLARR-NDANPEITERFELFIVGREIA 422
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF Q+ K E E + +YD DYI ALEYG+PP GCGIG+DRL+
Sbjct: 423 NGFSELNDPEDQAARFLEQVKAK-EAGDEEAMFYDADYIRALEYGLPPTGGCGIGIDRLV 481
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S +IRDVILFP +R E
Sbjct: 482 MLLTDSPSIRDVILFPQMRTE 502
>gi|456063656|ref|YP_007502626.1| Lysyl-tRNA synthetase [beta proteobacterium CB]
gi|455440953|gb|AGG33891.1| Lysyl-tRNA synthetase [beta proteobacterium CB]
Length = 518
Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust.
Identities = 264/447 (59%), Positives = 332/447 (74%), Gaps = 16/447 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
+LKRVMGK SF +QD SG +IQ YI++EI G +++ FK++D+GD I A+G LFK
Sbjct: 80 VLKRVMGKASFATIQDRSG-----QIQFYINDEISGADIHGAFKHWDMGDFISAEGNLFK 134
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++ S+L+L++KSLRPLP+KF LS+ E KYR RY+DLI+N +R F+ R+
Sbjct: 135 TNKGELSVECSNLRLLSKSLRPLPDKFHGLSDLETKYRQRYVDLIVNPESRNTFRARSNT 194
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+S+R M DFMEVETP+LH PGGA AKPFITHHN+L+M+MF+RIAPELYLKRL++G
Sbjct: 195 IASLRRHMLDADFMEVETPMLHPIPGGATAKPFITHHNALDMQMFMRIAPELYLKRLVVG 254
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE +I+ MD GT
Sbjct: 255 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTESLIRAAAMDAQGTAV 314
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQ----YNEIDLQNKLFLKSELKKI--NPKFNQ 294
+ +QGR LD SK F++LTI EAI KY Q Y L++ F+++ELKK NP
Sbjct: 315 LTHQGRELDLSKPFQRLTITEAILKYCGQSNKSYEPAQLEDAAFIRTELKKGGENP---D 371
Query: 295 KKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFI 354
L N LQL LFE E+ LW PTYI +YP E+SPLAR+S+ ITERFELFI
Sbjct: 372 SPTLKNAGLGALQLALFELVAESHLWEPTYIIDYPIEVSPLARESDT-RPGITERFELFI 430
Query: 355 IGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGI 414
G EIANGFSELND E+Q+ RF+ Q++ K E E + Y+D D+I ALEYGMPP GCGI
Sbjct: 431 TGREIANGFSELNDAEDQANRFRKQVEQK-EAGDEEAMYFDHDFIRALEYGMPPTGGCGI 489
Query: 415 GVDRLIMLLTNSKNIRDVILFPHLRNE 441
G+DRL+MLLT++ NIRDVILFPHLR E
Sbjct: 490 GIDRLVMLLTDAPNIRDVILFPHLRRE 516
>gi|145589653|ref|YP_001156250.1| lysyl-tRNA synthetase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|189082962|sp|A4SYX2.1|SYK_POLSQ RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|145048059|gb|ABP34686.1| lysyl-tRNA synthetase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 514
Score = 546 bits (1408), Expect = e-153, Method: Compositional matrix adjust.
Identities = 266/447 (59%), Positives = 331/447 (74%), Gaps = 16/447 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
+LKRVMGK SF +QD SG +IQ YI++EI G + + FK++D+GD I A+G LFK
Sbjct: 76 VLKRVMGKASFATIQDRSG-----QIQFYINDEISGADTHGAFKHWDMGDFISAEGNLFK 130
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++ S+L+L++KSLRPLP+KF LS+ E KYR RY+DLI+N +R FK R+
Sbjct: 131 TNKGELSVECSNLRLLSKSLRPLPDKFHGLSDLETKYRQRYVDLIVNPESRNTFKARSNA 190
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+S+R M DFMEVETP+LH PGGA AKPFITHHN+L+M+MFLRIAPELYLKRL++G
Sbjct: 191 IASLRRHMLDADFMEVETPMLHPIPGGATAKPFITHHNALDMQMFLRIAPELYLKRLVVG 250
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE +I+ +D GT
Sbjct: 251 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTEGLIRAAAVDAQGTAV 310
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQ----YNEIDLQNKLFLKSELKKI--NPKFNQ 294
+ +QGR LD SK F++LTI EAI KY Q Y I L + F+++ELKK NP
Sbjct: 311 LTHQGRELDLSKPFQRLTINEAILKYCAQSGKSYEAIQLDDADFIRAELKKGGENP---D 367
Query: 295 KKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFI 354
L N LQL LFE E+ LW PTYI +YP E+SPLAR+S+ ITERFELFI
Sbjct: 368 SPTLKNAGIGALQLALFELVAESHLWEPTYIIDYPIEVSPLARESDT-RPGITERFELFI 426
Query: 355 IGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGI 414
G EIANGFSELND E+Q+ RF+ Q++ K E E + Y+D D+I ALEYGMPP GCGI
Sbjct: 427 TGREIANGFSELNDAEDQANRFRKQVEQK-EAGDEEAMYFDHDFIRALEYGMPPTGGCGI 485
Query: 415 GVDRLIMLLTNSKNIRDVILFPHLRNE 441
G+DRL+MLLT++ NIRDVILFPHLR E
Sbjct: 486 GIDRLVMLLTDAPNIRDVILFPHLRRE 512
>gi|41582254|gb|AAS07872.1| lysyl-tRNA synthetase, partial [uncultured marine bacterium 580]
Length = 480
Score = 545 bits (1405), Expect = e-152, Method: Compositional matrix adjust.
Identities = 259/445 (58%), Positives = 339/445 (76%), Gaps = 16/445 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKN----LYTDFKNYDIGDIIGAKG 56
MLKRVMGK SF +QD + G+IQLY++ + I + LY FK +D+GDI+GAKG
Sbjct: 48 MLKRVMGKASFASIQD-----NKGRIQLYVARDFINSDDNPELYAQFKKWDLGDIVGAKG 102
Query: 57 TLFKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKK 116
LFKT T EL+I+V+ + L+TKS+RPLP KF LS+QE KYR RY+DLI+NE+T+K F
Sbjct: 103 KLFKTRTNELTIEVTEIVLLTKSIRPLPEKFHGLSDQETKYRQRYVDLIVNEDTKKTFLN 162
Query: 117 RTQIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKR 176
R++IIS++R FME+++F+EVETP+LH PGGA A+PF THHN+L+M M+LRIAPELYLKR
Sbjct: 163 RSKIISNMRAFMEEHEFLEVETPMLHPIPGGATARPFETHHNALDMDMYLRIAPELYLKR 222
Query: 177 LIIGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCI 236
L++GGF+++FEIN+NFRNEG+S RHNPEFTM+EFYAAYT Y WLM FTE I+ + +
Sbjct: 223 LVVGGFDRVFEINRNFRNEGLSVRHNPEFTMMEFYAAYTEYKWLMNFTEDCIRDVTKRIL 282
Query: 237 GTTKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKK 296
GT K+ YQ +++DF K FE+LT++EAI KY+ Q++E L + F+KS L K N +
Sbjct: 283 GTLKVKYQDKIIDFEKPFERLTLVEAIMKYSSQFSESQLNDIDFIKSHLSK-----NGEN 337
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
+ N+ QL+LFE E KLW+PTYI +YPTE+SPLAR S+ NN ITERFELFI G
Sbjct: 338 LPNSSGLGAYQLVLFELEAEAKLWDPTYIIDYPTEVSPLARASDT-NNAITERFELFIAG 396
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
EIANGFSELND E+Q+ RF+ Q+ K+ E + YYD D++ ALEYG+PP GCG+G+
Sbjct: 397 REIANGFSELNDAEDQAKRFQMQVAAKD-AGDEEAMYYDADFVRALEYGLPPTGGCGVGI 455
Query: 417 DRLIMLLTNSKNIRDVILFPHLRNE 441
DRL+MLLT+S +IRDVILFPH+R E
Sbjct: 456 DRLVMLLTDSPSIRDVILFPHMRAE 480
>gi|118594577|ref|ZP_01551924.1| lysyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
gi|118440355|gb|EAV46982.1| lysyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
Length = 504
Score = 545 bits (1404), Expect = e-152, Method: Compositional matrix adjust.
Identities = 263/445 (59%), Positives = 342/445 (76%), Gaps = 16/445 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKN----LYTDFKNYDIGDIIGAKG 56
MLKRVMGK SF +QD GKIQLY++ ++I LY+ FK +D+GDI+GAKG
Sbjct: 72 MLKRVMGKASFATIQD-----KQGKIQLYVARDLINSETNPELYSHFKKWDLGDILGAKG 126
Query: 57 TLFKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKK 116
+FKTNT EL+I+V+ + L+TKS+RPLP KF LS+QE KYR RY+DLI+NE+TR F K
Sbjct: 127 RVFKTNTNELTIEVTEIILLTKSIRPLPEKFHGLSDQETKYRQRYVDLIVNEDTRDTFLK 186
Query: 117 RTQIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKR 176
R++I+S IR FM++++F+EVETP+LH PGGA A+PF THHN+L+M+M+LRIAPELYLKR
Sbjct: 187 RSKIMSGIRTFMQEHEFLEVETPMLHPIPGGATARPFKTHHNALDMEMYLRIAPELYLKR 246
Query: 177 LIIGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCI 236
L++GGF+++FEIN+NFRNEG+S RHNPEFTM+EFYAAYT Y WLM+FTE I+ + +
Sbjct: 247 LVVGGFDRVFEINRNFRNEGLSVRHNPEFTMMEFYAAYTEYNWLMEFTESCIRYVAELVV 306
Query: 237 GTTKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKK 296
G+TK++YQG+ +DF KSF++LT++EAI KY+ +YNE DL + F+K+ L K K
Sbjct: 307 GSTKVNYQGKEIDFGKSFDRLTMVEAILKYSDKYNETDLLDLDFVKNALDKKGHTLPGKA 366
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L QL LFEE E LW+PTYI +YP E+SPLAR S+ N +ITERFELFI G
Sbjct: 367 GLG-----AYQLALFEEEAEEHLWDPTYIIDYPIEVSPLARASDT-NPDITERFELFIAG 420
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
EIANGFSELND E+Q+VRFK Q++ K E E + YYD D+I ALEYG+PP GCGIG+
Sbjct: 421 REIANGFSELNDAEDQAVRFKAQVEAK-ESGDEEAMYYDADFIRALEYGLPPTGGCGIGI 479
Query: 417 DRLIMLLTNSKNIRDVILFPHLRNE 441
DRL+ML+T+S +IRDV+LFPH+R E
Sbjct: 480 DRLVMLVTDSPSIRDVLLFPHMRAE 504
>gi|334131042|ref|ZP_08504812.1| Lysyl-tRNA synthetase, LysRS [Methyloversatilis universalis FAM5]
gi|333444118|gb|EGK72075.1| Lysyl-tRNA synthetase, LysRS [Methyloversatilis universalis FAM5]
Length = 499
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 249/441 (56%), Positives = 329/441 (74%), Gaps = 13/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQLYI+N+ +G+ ++ FK++D+GDI+G GTLF+
Sbjct: 72 MLKRVMGKASFATIQDMSG-----RIQLYITNDGVGEEVHGAFKHWDLGDIVGCSGTLFR 126
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGEL++K ++L++K+LRPLP KF LS+QE KYR+RY+DLI NE++R F R+++
Sbjct: 127 TRTGELTVKCDGIRLLSKALRPLPEKFHGLSDQEAKYRYRYLDLITNESSRATFVARSRM 186
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+S+IR M + F+EVETP++H PGGA AKPF THHN+L+M++FLRIAPELYLKRL++G
Sbjct: 187 MSAIRAEMTRQGFLEVETPMMHPIPGGAAAKPFKTHHNALDMELFLRIAPELYLKRLVVG 246
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF K+FEIN+NFRNEGISPRHNPEFTM+EFY AY +Y LM +TE +++ +GTTK
Sbjct: 247 GFEKVFEINRNFRNEGISPRHNPEFTMMEFYQAYADYRDLMDYTEYLLRHCAEQALGTTK 306
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
YQGR LD + F +LTI++AI+KY PQY E L ++ F+K + K + +
Sbjct: 307 FMYQGRELDLGQPFHRLTIVQAIRKYNPQYTEEQLADEAFVKQAIVTHGEKVKPGGLGS- 365
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E +LW PT+I +YP E+SPLAR+S+ E +ITERFELFI+G EIA
Sbjct: 366 -----LQLQLFEACAEAQLWEPTFIIDYPAEVSPLARRSDRE-PDITERFELFIVGREIA 419
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF Q+ K+ E + Y+D DYI ALE+G+PP GCGIG+DRL+
Sbjct: 420 NGFSELNDPEDQAARFLEQVKAKD-AGDEEAMYFDADYIRALEHGLPPTGGCGIGIDRLV 478
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S NIRDVILFP +R E
Sbjct: 479 MLLTDSANIRDVILFPQMRRE 499
>gi|171463252|ref|YP_001797365.1| lysyl-tRNA synthetase [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|238689052|sp|B1XTS4.1|SYK_POLNS RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|171192790|gb|ACB43751.1| lysyl-tRNA synthetase [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 514
Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust.
Identities = 264/447 (59%), Positives = 328/447 (73%), Gaps = 16/447 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
+LKRVMGK SF +QD SG +IQ YI++E+ G +++ FK++D+GD I +G LFK
Sbjct: 76 VLKRVMGKTSFATIQDRSG-----QIQFYINDELSGADVHGAFKHWDMGDFISTEGNLFK 130
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++ S+L+L++KSLRPLP+KF LS+ E KYR RY+DLI+N +R FK R+
Sbjct: 131 TNKGELSVECSNLRLLSKSLRPLPDKFHGLSDLETKYRQRYVDLIVNPESRSTFKARSNA 190
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+S+R M DFMEVETP+LH PGGA AKPFITHHN+L+M+MFLRIAPELYLKRL++G
Sbjct: 191 IASLRRHMLDADFMEVETPMLHPIPGGAAAKPFITHHNALDMQMFLRIAPELYLKRLVVG 250
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE +I+ +D GT
Sbjct: 251 GFERVFEINHNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTEGLIRAAAIDAQGTAV 310
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQ----YNEIDLQNKLFLKSELKKI--NPKFNQ 294
+ +QGR LD SK F++LTI EAI KY Q Y L++ F++ ELKK NP
Sbjct: 311 LTHQGRELDLSKPFQRLTITEAILKYCGQSGKSYEAAQLEDANFIRVELKKGGENP---D 367
Query: 295 KKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFI 354
L N LQL LFE E LW PTYI +YP E+SPLAR+S+ ITERFELFI
Sbjct: 368 APTLKNAGIGALQLALFELVAEEHLWEPTYIIDYPIEVSPLARESDT-RPGITERFELFI 426
Query: 355 IGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGI 414
G EIANGFSELND E+Q+ RF+ Q++ K E E + Y+D D+I ALEYGMPP GCGI
Sbjct: 427 TGREIANGFSELNDAEDQANRFRKQVEQK-EAGDEEAMYFDHDFIRALEYGMPPTGGCGI 485
Query: 415 GVDRLIMLLTNSKNIRDVILFPHLRNE 441
G+DRLIMLLT++ NIRDVILFPHLR E
Sbjct: 486 GIDRLIMLLTDAPNIRDVILFPHLRRE 512
>gi|119897778|ref|YP_932991.1| lysyl-tRNA synthetase [Azoarcus sp. BH72]
gi|166229792|sp|A1K5J9.1|SYK_AZOSB RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|119670191|emb|CAL94104.1| lysyl-tRNA synthetase [Azoarcus sp. BH72]
Length = 500
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 249/441 (56%), Positives = 329/441 (74%), Gaps = 13/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SFI +QD SG +IQLY+ + +G+++Y DFK++DIGDI+G GTLFK
Sbjct: 73 MLKRVMGKASFITIQDLSG-----RIQLYVQRDGVGEDVYADFKHWDIGDIVGCVGTLFK 127
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGEL++K S ++L+TKSLRPLP+KF L++ E KYR RY+DLI++E TR F R+++
Sbjct: 128 TKTGELTVKASEIRLLTKSLRPLPDKFHGLTDVEQKYRQRYLDLIMSEQTRFTFVARSRM 187
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+ SIR++M + F+EVETP++H PGGA AKPF+THHN+L+M++FLRIAPELYLKRL++G
Sbjct: 188 VQSIRNYMINHGFLEVETPMMHPIPGGAAAKPFVTHHNALDMELFLRIAPELYLKRLVVG 247
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G K+FE+N+NFRNEG+SPRHNPEFTM+EFY AY +Y LM FTE +I++ + +G
Sbjct: 248 GLEKVFEVNRNFRNEGLSPRHNPEFTMMEFYEAYADYRSLMNFTEGLIRQAAREALGAES 307
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
YQGR LD SK F +LTI++AI+KY P ++E L + ++K +++ K + +
Sbjct: 308 FVYQGRELDLSKPFHRLTIVQAIRKYHPGFSEAQLADAEWVKEKIQAFGEKVKPGGLGS- 366
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E +LW PT+I +YP E+SPLAR S+ N ITERFELFI+G EIA
Sbjct: 367 -----LQLQLFEACAEAELWEPTFIIDYPVEVSPLARASD-SNPEITERFELFIVGREIA 420
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF Q K E E + YYD DYI ALE+G+PP GCGIG+DRL+
Sbjct: 421 NGFSELNDPEDQAARFLAQAQAK-EAGDEEAMYYDADYIRALEFGLPPTGGCGIGIDRLV 479
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S +IRDVILFP +R E
Sbjct: 480 MLLTDSASIRDVILFPQMRPE 500
>gi|291613966|ref|YP_003524123.1| lysyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
gi|291584078|gb|ADE11736.1| lysyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
Length = 500
Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust.
Identities = 251/441 (56%), Positives = 333/441 (75%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQL+ISN+I G+ +++FK+YD+GDI+GA G LFK
Sbjct: 72 MLKRVMGKASFATVQDMSG-----RIQLFISNDITGEAAHSEFKHYDMGDILGAVGVLFK 126
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T +GELS++V+ ++L+TK+LRPLP KF L++ E KYR RY+DLI NE +RKVF RTQI
Sbjct: 127 TKSGELSVRVTQVRLLTKALRPLPEKFHGLTDMEQKYRQRYLDLITNEQSRKVFIARTQI 186
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I +IR F ++ ++EVETP++H PGGA AKPF+THHN+L+++M+LRIAPELYLKRL++G
Sbjct: 187 IQAIREFFVRHGYLEVETPMMHPIPGGASAKPFVTHHNALDLQMYLRIAPELYLKRLVVG 246
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF K+FE+N+NFRNEG+S RHNPEFTMIEFY AY +Y +LM F+EK+ ++ +GTT
Sbjct: 247 GFEKVFEVNRNFRNEGVSTRHNPEFTMIEFYEAYRDYKYLMDFSEKLFAEVARKVLGTTV 306
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQG+ LD K F +LT+++AI+KY PQ+ + L ++ FL +ELK + K+N K +
Sbjct: 307 ITYQGKELDLGKPFHRLTMVQAIQKYHPQFTDAQLNDRDFLVNELKDLKAKYNPKDAVGG 366
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEE E L+ PT+I +YP E+SPLAR S+ ITERFELFI+G EIA
Sbjct: 367 -----LQLSLFEELAEAHLFEPTFIIDYPVEVSPLARSSDA-RPEITERFELFIVGREIA 420
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q RF Q+ K+ E + + D DY+ ALEYG+PP +G GIG+DRL+
Sbjct: 421 NGFSELNDAEDQERRFDAQVAAKD-AGDEEAMFKDNDYVRALEYGLPPTAGEGIGIDRLV 479
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S +IRDVILFPH+R E
Sbjct: 480 MLLTDSASIRDVILFPHMRPE 500
>gi|254468124|ref|ZP_05081530.1| lysyl-tRNA synthetase [beta proteobacterium KB13]
gi|207086934|gb|EDZ64217.1| lysyl-tRNA synthetase [beta proteobacterium KB13]
Length = 503
Score = 539 bits (1388), Expect = e-150, Method: Compositional matrix adjust.
Identities = 258/445 (57%), Positives = 332/445 (74%), Gaps = 16/445 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIG----KNLYTDFKNYDIGDIIGAKG 56
MLKRVMGK SF +QD +G +IQLY++ ++I LY+ FK +D+GDIIGAKG
Sbjct: 71 MLKRVMGKASFATIQDRTG-----RIQLYVARDLINNEDNPELYSSFKKWDMGDIIGAKG 125
Query: 57 TLFKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKK 116
LFKTNT EL+I+V+ + L+TKSLRP+P KF L +QE+KYR RY+DL++N+ T+ F
Sbjct: 126 KLFKTNTDELTIEVTEICLLTKSLRPMPEKFHGLQDQEMKYRQRYVDLMVNQETKDTFLT 185
Query: 117 RTQIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKR 176
R++ I SIR FM N F+EVETP+LH PGGA AKPF+THHN+L+M+MF+RIAPELYLKR
Sbjct: 186 RSKAIQSIREFMVSNKFLEVETPMLHPIPGGASAKPFVTHHNALDMEMFMRIAPELYLKR 245
Query: 177 LIIGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCI 236
L++GGF+++FEIN+NFRNEG+S RHNPEFTM+EFYAAY +Y WLM FTE I+ I C
Sbjct: 246 LVVGGFDRVFEINRNFRNEGLSVRHNPEFTMMEFYAAYADYQWLMTFTEDCIRSSITGCG 305
Query: 237 GTTKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKK 296
K+ YQ + +DFS+ F++LT+++AI+KY Q+ DL N F++ L+K+ + +
Sbjct: 306 VDLKLTYQDKEIDFSQPFDRLTLVQAIEKYNNQFKSEDLLNAEFIEQTLQKMGEELPPNR 365
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L + LQL LFE E LWNPT+I +YPTE+SPLAR S+ + ITERFELFI G
Sbjct: 366 SLGS-----LQLALFEVVAEEHLWNPTFIIDYPTEVSPLARASD-NDPTITERFELFIAG 419
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
EIANGFSELNDPEEQS RFK Q++ K E + + YYD D+I ALEYGMPP GCGIG+
Sbjct: 420 REIANGFSELNDPEEQSERFKKQVEQK-EAGDDEAMYYDADFIRALEYGMPPTGGCGIGI 478
Query: 417 DRLIMLLTNSKNIRDVILFPHLRNE 441
DRLIML+TN +IRDVILFPH+R E
Sbjct: 479 DRLIMLITNKPSIRDVILFPHMRPE 503
>gi|217970370|ref|YP_002355604.1| lysyl-tRNA synthetase [Thauera sp. MZ1T]
gi|217507697|gb|ACK54708.1| lysyl-tRNA synthetase [Thauera sp. MZ1T]
Length = 513
Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust.
Identities = 247/441 (56%), Positives = 326/441 (73%), Gaps = 13/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR+MGK SF+ +QD SG +IQLY+ + +G+++Y FK +DIGDI+G GT+FK
Sbjct: 74 MLKRIMGKASFVTIQDLSG-----RIQLYVQRDGVGEDVYAQFKTWDIGDIVGCVGTVFK 128
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGEL++K + ++L+TKSLRPLP+KF L++ E KYR RY+DLI+NE +R F R+++
Sbjct: 129 TKTGELTVKAAEIRLLTKSLRPLPDKFHGLTDVEQKYRQRYVDLIMNEQSRFTFVARSRM 188
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+ SIR++M + F+EVETP++H PGGA AKPF THHN+L+M++FLRIAPELYLKRL++G
Sbjct: 189 VQSIRNYMTGHGFLEVETPMMHPIPGGAAAKPFTTHHNALDMELFLRIAPELYLKRLVVG 248
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G K+FE+N+NFRNEG+SPRHNPEFTM+EFY AY NY LM FTE +I+ + +GT
Sbjct: 249 GLEKVFEVNRNFRNEGLSPRHNPEFTMMEFYEAYANYKTLMDFTEGLIRHAAREALGTES 308
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
YQGR LD SK F +LTI++AI+KY P + L + +LK ++ F +K
Sbjct: 309 FVYQGRELDLSKPFHRLTIVQAIRKYHPGFTAEQLADAAWLKEKIV----AFGEKVKPGG 364
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
L LQL LFE E +LW PT+I +YP E+SPLAR S+ + ITERFELFI+G EIA
Sbjct: 365 LGS--LQLQLFEACAEAELWEPTFIIDYPVEVSPLARASDT-DPEITERFELFIVGREIA 421
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF+ Q++ K E E + YYD DYI ALEYG+PP GCGIG+DRL+
Sbjct: 422 NGFSELNDPEDQAARFRAQVEAK-EAGDEEAMYYDADYIRALEYGLPPTGGCGIGIDRLV 480
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT++ IRDVILFP +R E
Sbjct: 481 MLLTDAPAIRDVILFPQMRPE 501
>gi|241763859|ref|ZP_04761904.1| lysyl-tRNA synthetase [Acidovorax delafieldii 2AN]
gi|241366903|gb|EER61317.1| lysyl-tRNA synthetase [Acidovorax delafieldii 2AN]
Length = 514
Score = 536 bits (1381), Expect = e-150, Method: Compositional matrix adjust.
Identities = 250/442 (56%), Positives = 333/442 (75%), Gaps = 5/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD S ++ G+IQLYI+ + +G++LY FK++D+GDIIGA+GTL K
Sbjct: 78 MLKRVMGKASFATVQDGSLGETGGRIQLYITRDALGEDLYAAFKHWDLGDIIGAEGTLMK 137
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+KV++L+L+TKSLRP+P+KF +++QE+KYR RY+DL+ +E RK F R++
Sbjct: 138 TKTGELSVKVTTLRLLTKSLRPMPDKFHGVADQEVKYRQRYVDLMTDEAARKRFVARSKA 197
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+S IR FM ++ F+EVETP+LH PGGA AKPF+THHN+L +M+LRIAPELYLKRL++G
Sbjct: 198 VSGIRDFMVQHGFLEVETPMLHPIPGGANAKPFVTHHNALEQEMYLRIAPELYLKRLLVG 257
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEGIS RHNPEFTM+EFYAAY NY LM FTE++++ + GT +
Sbjct: 258 GFERVFEINRNFRNEGISVRHNPEFTMMEFYAAYWNYQDLMGFTEQLVRDAALKAAGTLQ 317
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQGR +D ++ F +LTI EAI +YT +D + +L S LKK+ +K L+
Sbjct: 318 LTYQGREVDLAQPFARLTIREAIFQYTEAGAHVD--DAAWLISALKKLGMN-EEKDKLSA 374
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQ++ FEET E KLW PT+I +PTEISPLAR +N +TERFEL+I G E
Sbjct: 375 RSLASLQVLYFEETVEDKLWQPTFIMEHPTEISPLAR-ANDARPEVTERFELYITGREFG 433
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RF Q+ K+ + E + Y+D D++ ALEYGMPPA GCGIG+DRL+
Sbjct: 434 NGFSELNDAEDQAARFHAQVAAKDSGDDE-AMYFDHDFVRALEYGMPPAGGCGIGIDRLM 492
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S +IRDVILFP LR E+
Sbjct: 493 MLLTDSPSIRDVILFPALRRES 514
>gi|339482024|ref|YP_004693810.1| Lysyl-tRNA synthetase [Nitrosomonas sp. Is79A3]
gi|338804169|gb|AEJ00411.1| Lysyl-tRNA synthetase [Nitrosomonas sp. Is79A3]
Length = 502
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 253/441 (57%), Positives = 333/441 (75%), Gaps = 12/441 (2%)
Query: 2 LKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKT 61
LKRVMGK SF +QD SG +IQLYIS++ G+ ++ FK++D+GDI GA+GTLFKT
Sbjct: 74 LKRVMGKASFATIQDMSG-----RIQLYISDDHTGEAVHAAFKHHDLGDIFGAQGTLFKT 128
Query: 62 NTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQII 121
TGELSI+V+ L+L+TKSLRPLP KF L++QE KYR RY+DLI NE RKVF R+++I
Sbjct: 129 KTGELSIRVTDLQLLTKSLRPLPEKFHGLTDQEQKYRMRYLDLITNEEARKVFTIRSKVI 188
Query: 122 SSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGG 181
+IR F D++EVETP++H PGGA A+PF THHN+L+M ++LRIAPELYLKRL++GG
Sbjct: 189 QAIREFFVARDYLEVETPMMHPIPGGASARPFSTHHNALDMALYLRIAPELYLKRLVVGG 248
Query: 182 FNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKI 241
K+FEIN+NFRNEGIS RHNPEFTM+EFY AY ++ +LM FTEKM + +GTT+I
Sbjct: 249 MEKVFEINRNFRNEGISTRHNPEFTMVEFYEAYQDFTYLMDFTEKMFSTVAEKVLGTTQI 308
Query: 242 DYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNNL 301
YQG+ +D +K F +LTI +AI+K+ P+Y+E LQ++ FL ++L+ + FN +
Sbjct: 309 TYQGKAIDLAKPFTRLTITQAIQKFHPEYSEAQLQDRDFLINKLQTLGIHFNSHDGIGG- 367
Query: 302 KKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIAN 361
LQL LF+ETTE L+ PT+I +YP E+SPLAR+ N N IT+RFEL+I G EIAN
Sbjct: 368 ----LQLSLFDETTEHLLFEPTFIVDYPAEVSPLARR-NDNNPEITDRFELYIAGREIAN 422
Query: 362 GFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLIM 421
GFSELND E+Q+VRF+ Q + K + E + +YD DYI ALEYG+PP +G GIG+DRL+M
Sbjct: 423 GFSELNDSEDQAVRFQEQANAKEAGDAE-AMHYDADYIRALEYGLPPTAGEGIGIDRLVM 481
Query: 422 LLTNSKNIRDVILFPHLRNEN 442
LLT+S +IRDVILFP LR E+
Sbjct: 482 LLTDSPSIRDVILFPQLRRED 502
>gi|71908461|ref|YP_286048.1| lysyl-tRNA synthetase [Dechloromonas aromatica RCB]
gi|123733161|sp|Q47C53.1|SYK_DECAR RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|71848082|gb|AAZ47578.1| Lysyl-tRNA synthetase, class-2 [Dechloromonas aromatica RCB]
Length = 501
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 248/441 (56%), Positives = 326/441 (73%), Gaps = 13/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ+YI+ + +G+ +Y DFK +D+GDIIG G+L K
Sbjct: 74 MLKRVMGKASFATIQDLSG-----RIQIYITRDRVGEEVYADFKTWDLGDIIGVTGSLMK 128
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELSI+ + ++L+TKSLRPLP+KF L++QE+KYR RY+DLI+NE TR F+ R+ I
Sbjct: 129 TKTGELSIQAAEIRLLTKSLRPLPDKFHGLADQEMKYRQRYVDLIMNEETRFTFRARSAI 188
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
++SIR++M + FMEVETP++H PGGA AKPF+THHN+L+M+ FLRIAPELYLKRL++G
Sbjct: 189 VASIRNYMTGHGFMEVETPMMHPIPGGASAKPFVTHHNALDMQQFLRIAPELYLKRLVVG 248
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF K+FEIN+NFRNEG+SPRHNPEFTM+EFY AY NY LM FTE +++ + +G
Sbjct: 249 GFEKVFEINRNFRNEGLSPRHNPEFTMMEFYEAYANYHTLMDFTEGLLRHAAREALGKEV 308
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
YQGR LD SK F +LTI +AI++ P++++ +L + FLK+++K + +
Sbjct: 309 FVYQGRELDLSKPFHRLTINQAIQRQHPEFSDAELADPEFLKAKIKHFGEPLKPGGLGS- 367
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E W PT+I +YP E+SPLAR S+ N ITERFELFI+G EIA
Sbjct: 368 -----LQLQLFEACAEAHCWEPTFIIDYPVEVSPLARASDT-NPEITERFELFIVGREIA 421
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RF+ Q+ K+ E + YYD D+I ALEYG+PP GCGIG+DRLI
Sbjct: 422 NGFSELNDAEDQAARFQEQMKAKD-AGDEEAMYYDADFIRALEYGLPPTGGCGIGIDRLI 480
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT++ IRDVILFP +R E
Sbjct: 481 MLLTDAAAIRDVILFPSMRPE 501
>gi|372489475|ref|YP_005029040.1| lysyl-tRNA synthetase (class II) [Dechlorosoma suillum PS]
gi|359356028|gb|AEV27199.1| lysyl-tRNA synthetase (class II) [Dechlorosoma suillum PS]
Length = 500
Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust.
Identities = 243/442 (54%), Positives = 332/442 (75%), Gaps = 12/442 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
ML+R+MGK SF +QD SG +IQLY+ +++G Y DFK++DIGDI+GA+GTLFK
Sbjct: 71 MLRRLMGKASFATIQDVSG-----RIQLYVKVDLVGAEAYDDFKHWDIGDIVGAEGTLFK 125
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGEL+I+VS ++L++K+LRPLP KF L++ E ++R RY+DLI+NE++R F R+++
Sbjct: 126 TRTGELTIQVSEIRLLSKALRPLPEKFHGLTDMEQRHRQRYLDLIMNESSRFTFVARSRM 185
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I SIR++M + F+EVETP++H PGGA AKPFITHHN+L+M++FLRIAPELYLKRL++G
Sbjct: 186 IQSIRNYMISHHFLEVETPMMHPIPGGASAKPFITHHNALDMELFLRIAPELYLKRLVVG 245
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF K+FE+N+NFRNEG+S RHNPEFTM+EFY AY +Y LM FTE +++ D +GT
Sbjct: 246 GFEKVFEVNRNFRNEGLSTRHNPEFTMMEFYEAYADYKLLMDFTEGLLRHAARDALGTEV 305
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
YQGR LD SK F +LT+++A++ P Y+E +L + +LK +L ++ + +
Sbjct: 306 FQYQGRELDLSKPFARLTMVQAVRAQCPGYSEAELNDAEWLKKKLGEM-----KVAVKPG 360
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
+ LQL++FEE E LW+PT+I +YP E+SPLAR S+ N ITERFELFI+G EIA
Sbjct: 361 MGLGALQLLMFEEVAEANLWDPTFIIDYPVEVSPLARASD-SNPEITERFELFIVGREIA 419
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF Q K+ E + +YD DYI ALE+G+PP GCGIG+DRL+
Sbjct: 420 NGFSELNDPEDQAARFLEQAKAKD-AGDEEAMFYDADYIKALEFGLPPTGGCGIGIDRLV 478
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT++ NIRDVILFP +R E+
Sbjct: 479 MLLTDTANIRDVILFPQMRKED 500
>gi|302878949|ref|YP_003847513.1| lysyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
gi|302581738|gb|ADL55749.1| lysyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
Length = 507
Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust.
Identities = 253/441 (57%), Positives = 331/441 (75%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF LQD SG ++QL+ISN +G+ + FK+YD+GDI+GA G LFK
Sbjct: 79 MLKRVMGKASFATLQDMSG-----RLQLFISNGDVGEEAHAAFKHYDLGDILGAVGVLFK 133
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS++VS ++L+TKSLRPLP KF L++QE KYR RY+DLI N + R VF RT+I
Sbjct: 134 TKTGELSVRVSQVRLLTKSLRPLPEKFHGLADQEQKYRQRYLDLITNPDARHVFVTRTKI 193
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I +IR F + ++EVETP++H+ PGGA AKPF THHN+L+M+MFLRIAPELYLKRL++G
Sbjct: 194 IQAIREFFIHHGYLEVETPMMHSIPGGASAKPFETHHNALDMQMFLRIAPELYLKRLVVG 253
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y +LM FTEK+++++ +GTT
Sbjct: 254 GFEKVFEINRNFRNEGLSTRHNPEFTMLEFYEAYRDYNYLMGFTEKLLREVARKVLGTTI 313
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQGR LD K F +LT+++AI+KY PQ++ L ++ F+ +EL+ + K N K L
Sbjct: 314 VSYQGRELDLGKPFHRLTMVQAIQKYHPQFSTEQLHDRDFVLTELQDLKAKHNPKDCLGG 373
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEE +ET L+ PT+I +YP E+SPLAR S+ N ITERFELF++G E+A
Sbjct: 374 -----LQLSLFEELSETLLFEPTFIIDYPVEVSPLARSSDA-NPAITERFELFVLGRELA 427
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q RF Q+ + E E + + D DYI ALEYG+PP +G GIG+DRLI
Sbjct: 428 NGFSELNDAEDQEARFDAQV-IAKEAGDEEAMFKDNDYIRALEYGLPPTAGEGIGIDRLI 486
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
M+LT+S +IRDVILFP +R E
Sbjct: 487 MMLTDSSSIRDVILFPQMRPE 507
>gi|349575116|ref|ZP_08887040.1| lysine--tRNA ligase [Neisseria shayeganii 871]
gi|348013329|gb|EGY52249.1| lysine--tRNA ligase [Neisseria shayeganii 871]
Length = 504
Score = 533 bits (1374), Expect = e-149, Method: Compositional matrix adjust.
Identities = 242/441 (54%), Positives = 330/441 (74%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR MGK SF LQD SG +IQLYI+N+ +G+ + DFK++D+GDI+GA+GTLFK
Sbjct: 76 MLKRAMGKASFATLQDMSG-----QIQLYINNQGVGEEAHNDFKHWDMGDIVGAEGTLFK 130
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GEL+++VS+++L+TKSLRPLP+K + LS+QE KYR RY+DLI NE +R +F KR+QI
Sbjct: 131 TNHGELTVRVSAVRLLTKSLRPLPDKHKGLSDQETKYRQRYVDLIANEASRDIFVKRSQI 190
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+ +IR FM ++EVETP++H PGGA AKPFITHHN+L+M ++LRIAPELYLKRL++G
Sbjct: 191 VQAIRQFMVDERYLEVETPMMHPIPGGAAAKPFITHHNALDMPLYLRIAPELYLKRLVVG 250
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN+NFRNEG+S RHNPEFTM+EFY A+ +Y +M TE +I++ + G K
Sbjct: 251 GLERVFEINRNFRNEGMSVRHNPEFTMMEFYEAFADYQRMMALTESIIRQAAVAACGRAK 310
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I+Y GR +D FE+LTI++AIKK+ P Y + L + +LK E+ K + +
Sbjct: 311 IEYNGREVDLESPFERLTILQAIKKFNPHYTDEQLNDAEWLKQEIVKHGESLPPSPGIGS 370
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E+KLW PT+I +YP E+SPLAR S+ + +TERFELF++G E+A
Sbjct: 371 -----LQLALFEGCAESKLWQPTFIIDYPVEVSPLARASDTQ-PGLTERFELFVVGRELA 424
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RFK Q+ K+ + E + +YD DYI A+EYG+PP GCGIG+DRL+
Sbjct: 425 NGYSELNDPEDQAARFKAQVAQKDAGDDE-AMHYDADYIRAMEYGLPPTGGCGIGIDRLV 483
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+++ IRDV+LFP +R E
Sbjct: 484 MLLTDAQTIRDVVLFPQMRPE 504
>gi|82703393|ref|YP_412959.1| lysyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
gi|82411458|gb|ABB75567.1| lysyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
Length = 507
Score = 533 bits (1373), Expect = e-149, Method: Compositional matrix adjust.
Identities = 248/442 (56%), Positives = 333/442 (75%), Gaps = 12/442 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
+LKRVMGK SF LQD G+IQLYI+ ++ G + Y F++YD+GDI+GA+GTLF+
Sbjct: 78 VLKRVMGKASFATLQDM-----RGRIQLYIAKDVAGDSAYGAFRHYDLGDILGAEGTLFR 132
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS++V++L+L+TKSLRPLP KF LS+QE KYR RY+DLI NE++RKVF R++I
Sbjct: 133 TRTGELSVRVTNLRLLTKSLRPLPEKFHGLSDQEQKYRQRYLDLITNESSRKVFIARSRI 192
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I +IR F+ + ++EVETP++H PGGA A+PFITHHN+L+M+++LRIAPELYLKRL+IG
Sbjct: 193 IQAIREFLVGHGYLEVETPMMHPIPGGAAARPFITHHNALDMQLYLRIAPELYLKRLVIG 252
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G K+FEIN++FRNEGIS RHNPEFTM+EFY AY +Y +LM TE +++++ + +G
Sbjct: 253 GLEKVFEINRSFRNEGISTRHNPEFTMLEFYEAYRDYAYLMDLTEALLREVTLKVLGAAS 312
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
YQ R LD ++ F +LTI EAI+K+ P+Y E L ++ FL +L+++ + +
Sbjct: 313 FTYQERELDLAQPFARLTITEAIRKFHPEYTEAQLDDRAFLIDKLQELGIPYKPGDGVGG 372
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LF+ETTE L++PT+I +YP E+SPLAR+ N N IT+RFEL+I G EIA
Sbjct: 373 -----LQLTLFDETTEHLLFDPTFIVDYPAEVSPLARR-NDRNPAITDRFELYIAGREIA 426
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+VRF Q K + E + +YD DYI ALEYG+PP +G GIG+DRL+
Sbjct: 427 NGFSELNDPEDQAVRFLEQARAKEAGDAE-AMHYDADYIRALEYGLPPTAGEGIGIDRLV 485
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLTNS +IRDVILFP LR E+
Sbjct: 486 MLLTNSPSIRDVILFPQLRRED 507
>gi|257092653|ref|YP_003166294.1| lysyl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade
IIA str. UW-1]
gi|257045177|gb|ACV34365.1| lysyl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade
IIA str. UW-1]
Length = 504
Score = 532 bits (1371), Expect = e-148, Method: Compositional matrix adjust.
Identities = 247/441 (56%), Positives = 320/441 (72%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SFI LQD SG +IQ+Y+S + +G++ Y FK +D+GDI+GA GTLF+
Sbjct: 76 MLKRVMGKASFITLQDLSG-----RIQVYVSRDHLGEDDYAGFKRWDLGDIVGAVGTLFR 130
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGEL+++ ++L+ KSLRPLP KF L++QE KYR RY+DLI NE +R F R++I
Sbjct: 131 TKTGELTVECLEIRLLAKSLRPLPEKFHGLTDQEQKYRMRYVDLITNEQSRFTFAVRSRI 190
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+ SIR FM + F+EVETP++H PGGA A+PF THHN+L+M +FLRIAPELYLKRL++G
Sbjct: 191 VQSIRSFMVHHGFLEVETPMMHPIPGGATARPFATHHNALDMPLFLRIAPELYLKRLVVG 250
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFY AYT Y LM FTE +++ + +G
Sbjct: 251 GFERVFEINRNFRNEGLSPRHNPEFTMMEFYEAYTEYRQLMDFTEGLLRHSAREALGAEA 310
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+YQGR LDF+K F +LTI +AI++ P ++ L + +L+ +L + L
Sbjct: 311 FEYQGRRLDFAKPFARLTISDAIRQSHPGFSVAQLADAAWLREKLSAMKVDIGATDGLGT 370
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E LW+PT+I +YP E+SPLAR+S+ N + ERFELFI G EIA
Sbjct: 371 -----LQLKLFEETAEADLWDPTFIIDYPAEVSPLARRSD-SNPEVAERFELFIAGREIA 424
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF Q K E E + YYD DY+ ALEYG+PP GCGIG+DRL+
Sbjct: 425 NGFSELNDPEDQAARFLEQAKAK-EAGDEEAMYYDADYVRALEYGLPPTGGCGIGIDRLV 483
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S NIRDVILFP +R E
Sbjct: 484 MLLTDSPNIRDVILFPQMRPE 504
>gi|351731191|ref|ZP_08948882.1| lysyl-tRNA synthetase [Acidovorax radicis N35]
Length = 514
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 249/442 (56%), Positives = 332/442 (75%), Gaps = 5/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD S + G+IQLY++ + +G++LY FK++D+GDI+GA+GTL K
Sbjct: 78 MLKRVMGKASFATVQDGSLGEVGGRIQLYVTRDAVGEDLYAAFKHWDLGDIVGAEGTLMK 137
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+KV+SL+L+TKSLRPLP+KF +++QE KYR RY+DLI +E RK F R++
Sbjct: 138 TKTGELSVKVTSLRLLTKSLRPLPDKFHGMADQEQKYRQRYVDLITDEQARKRFMARSKA 197
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+SS+R FM + F+EVETP+LH PGGA AKPF+THHN+L +M+LRIAPELYLKRLI+G
Sbjct: 198 VSSLREFMVSHGFLEVETPMLHPIPGGANAKPFVTHHNALEQEMYLRIAPELYLKRLIVG 257
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+++RNEGIS RHNPEFTM+EFYAAY NY+ LM FTE +I+++ + G+ +
Sbjct: 258 GFERVFEINRSYRNEGISVRHNPEFTMMEFYAAYWNYLDLMDFTETLIREVALKATGSLQ 317
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQGR +D ++ F +LTI EAI +YT +D + +L S LKK+ +K L+
Sbjct: 318 MTYQGRAVDLTQPFARLTIREAIFQYTEAGAHVD--DAAWLISALKKLGLN-EEKNKLST 374
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQ++ FEET E KLW PT+I +PTEISPLAR +N +TERFEL+I G E
Sbjct: 375 RSLASLQVLYFEETVEDKLWMPTFIMEHPTEISPLAR-ANDTRPEVTERFELYITGREFG 433
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP GCGIG+DRL+
Sbjct: 434 NGFSELNDAEDQAARFHAQVAAKDSGDDE-AMFYDHDFVRALEYGMPPTGGCGIGIDRLM 492
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S +IRDVILFP LR E+
Sbjct: 493 MLLTDSPSIRDVILFPALRRES 514
>gi|121595553|ref|YP_987449.1| lysyl-tRNA synthetase [Acidovorax sp. JS42]
gi|120607633|gb|ABM43373.1| lysyl-tRNA synthetase [Acidovorax sp. JS42]
Length = 515
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 247/442 (55%), Positives = 329/442 (74%), Gaps = 5/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF LQD S D+ G+IQLY++ + IG+ Y+DFK +D+GDI+GA+GTL K
Sbjct: 79 MLKRVMGKASFATLQDGSLGDTGGRIQLYVTRDAIGEEAYSDFKRWDLGDILGAEGTLMK 138
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+KVS L+L+TKSLRP+P+KF +++QE+KYR RY+DL+ +E R+ F R++
Sbjct: 139 TKTGELSVKVSRLRLLTKSLRPMPDKFHGVADQEVKYRQRYVDLMTDEAARRRFVARSKA 198
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+ SIR FM ++ F+EVETP+LH PGGA AKPF+THHN+L +MFLRIAPELYLKRLI+G
Sbjct: 199 VGSIRSFMMEHGFLEVETPMLHPIPGGANAKPFVTHHNALEQEMFLRIAPELYLKRLIVG 258
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEGIS RHNPEFTM+EFYAAY NY LM FTE +++ + GT +
Sbjct: 259 GFERVFEINRNFRNEGISVRHNPEFTMMEFYAAYWNYRDLMDFTEALVRDAALKATGTLQ 318
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ Y GR +D ++ F++LTI EAI ++T +D + +L S LKK+ +K L+
Sbjct: 319 LTYGGRAVDLAQPFQRLTIREAIYQHTEAGAHVD--DAAWLISALKKLG-MTEEKDRLST 375
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQ++ FEE E KLW PT+I +PTEISPLAR +++ +TERFEL+I G E
Sbjct: 376 RTLASLQVLYFEEEVEDKLWQPTFIMEHPTEISPLARANDL-RPEVTERFELYITGREFG 434
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RF Q+ K+ + E + ++D D++ ALEYGMPP GCGIG+DRL+
Sbjct: 435 NGFSELNDAEDQAARFHAQVAAKDAGDDE-AMFFDHDFVRALEYGMPPTGGCGIGIDRLM 493
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S +IRDVILFP LR E+
Sbjct: 494 MLLTDSPSIRDVILFPALRREH 515
>gi|224824517|ref|ZP_03697624.1| lysyl-tRNA synthetase [Pseudogulbenkiania ferrooxidans 2002]
gi|224603010|gb|EEG09186.1| lysyl-tRNA synthetase [Pseudogulbenkiania ferrooxidans 2002]
Length = 500
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 244/441 (55%), Positives = 336/441 (76%), Gaps = 13/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF LQD SG +IQ+++SN+ G + FK++D+GDI+ A+GTLFK
Sbjct: 73 MLKRVMGKASFATLQDGSG-----RIQIFVSNDKTGLEQHDQFKHWDMGDIVAARGTLFK 127
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGEL+++ + ++L++KS+RPLP KF L++QE KYR RY+DLI+NE +R VF KR+QI
Sbjct: 128 TKTGELTVQANEVRLLSKSIRPLPEKFHGLTDQEQKYRQRYLDLIMNEQSRDVFTKRSQI 187
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+ IR +M ++EVETP++H PGGA AKPF+THHN+L+M ++LRIAPELYLKRL++G
Sbjct: 188 VQGIRSYMVDEGYLEVETPMMHPIPGGATAKPFVTHHNALDMPLYLRIAPELYLKRLVVG 247
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN+NFRNEG+S RHNPEFTM+EFY AY++Y +M+ TE +I+K+ D +GT
Sbjct: 248 GLERVFEINRNFRNEGMSTRHNPEFTMMEFYEAYSDYQRMMEMTEGVIQKLAKDILGTLH 307
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQG+ +D SK FE+LTI+ AIKKY P Y++ L ++ +LK E+ ++ K +L +
Sbjct: 308 IQYQGKTVDLSK-FERLTIVGAIKKYNPHYSDEQLHDRAWLKEEIARL----GGKPVLTD 362
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEE E++LWNPT+I +YP E+SPLAR S+ ++ ITERFELF++G E+A
Sbjct: 363 -GIGGLQLSLFEECAESQLWNPTFIVDYPVEVSPLARGSD-KHAGITERFELFVVGRELA 420
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RF Q+ K+ + E + +YD DYI ALE+G+PP GCGIG+DRL+
Sbjct: 421 NGYSELNDPEDQAARFLAQVQQKDAGDDE-AMHYDADYIRALEFGLPPTGGCGIGIDRLV 479
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S +IRDVILFP +R E
Sbjct: 480 MLLTDSPSIRDVILFPQMRAE 500
>gi|326316036|ref|YP_004233708.1| lysyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC 19860]
gi|323372872|gb|ADX45141.1| lysyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC 19860]
Length = 518
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 245/442 (55%), Positives = 332/442 (75%), Gaps = 5/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD S + G+IQLY++ + IG+ Y FK++D+GDI+GA+GTL K
Sbjct: 82 MLKRVMGKASFATVQDGSLGATGGRIQLYVTRDAIGEEAYAAFKHWDLGDIVGAEGTLMK 141
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+KV++L+L+TKSLRP+P+KF +++QE+KYR RY+DL+ +E RK F R++
Sbjct: 142 TKTGELSVKVTTLRLLTKSLRPMPDKFHGVADQEVKYRQRYVDLMTDEAARKRFIARSKA 201
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+S IR FM ++ F+EVETP+LH PGGA AKPF+THHN+L +M+LRIAPELYLKRL++G
Sbjct: 202 VSGIREFMVQHGFLEVETPMLHPIPGGANAKPFVTHHNALEQEMYLRIAPELYLKRLVVG 261
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEGIS RHNPEFTM+EFYAAY NY LM FTE++++ G+ +
Sbjct: 262 GFERVFEINRNFRNEGISVRHNPEFTMMEFYAAYWNYRDLMDFTEQLVRDAATKAAGSLQ 321
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQGR +D S+ FE+LTI EAI ++T +D + +L + L+K+ +K L+
Sbjct: 322 LTYQGRAVDLSQPFERLTIREAILRHTEAGEGVD--DAAWLVAALRKLGLS-EEKDRLST 378
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQ++ FEET E KLW PT+I +PTEISPLAR +N +TERFEL+I G E
Sbjct: 379 RTLAGLQVLYFEETVEDKLWQPTFIMEHPTEISPLAR-ANDTRPEVTERFELYITGREFG 437
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RF++Q++ K+ + E + Y+D D++ ALEYGMPP GCGIG+DRL+
Sbjct: 438 NGFSELNDAEDQAARFQSQVEAKDSGDDE-AMYFDHDFVRALEYGMPPTGGCGIGIDRLM 496
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S +IRDVILFP LR E+
Sbjct: 497 MLLTDSPSIRDVILFPALRREH 518
>gi|120609891|ref|YP_969569.1| lysyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
gi|120588355|gb|ABM31795.1| lysyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
Length = 518
Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust.
Identities = 244/442 (55%), Positives = 334/442 (75%), Gaps = 5/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD S ++G+IQLY++ + IG+ Y FK++D+GDI+GA+GTL K
Sbjct: 82 MLKRVMGKASFATVQDGSLGATHGRIQLYVTRDAIGEEAYAAFKHWDLGDIVGAEGTLMK 141
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+KV++L+L+TKSLRP+P+KF +++QE+KYR RY+DL+ +E R+ F R++
Sbjct: 142 TKTGELSVKVTNLRLLTKSLRPMPDKFHGVADQEVKYRQRYVDLMTDEAARRRFIARSKA 201
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+S IR FM ++ F+EVETP+LH PGGA AKPF+THHN+L +M+LRIAPELYLKRL++G
Sbjct: 202 VSGIREFMVQHGFLEVETPMLHPIPGGANAKPFVTHHNALEQEMYLRIAPELYLKRLVVG 261
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEGIS RHNPEFTM+EFYAAY NY LM FTE++++ G+ +
Sbjct: 262 GFERVFEINRNFRNEGISVRHNPEFTMMEFYAAYWNYRDLMDFTEQLVRDAATKAAGSLQ 321
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQGR +D S+ FE+LTI EAI ++T + +D + +L + L+K+ +K L+
Sbjct: 322 LTYQGRAVDLSQPFERLTIREAILRHTDAGDGVD--DAAWLVAALRKLGLS-EEKDRLST 378
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQ++ FEET E KLW PT+I +PTEISPLAR +N +TERFEL+I G E
Sbjct: 379 RSLAGLQVLYFEETVEDKLWQPTFIMEHPTEISPLAR-ANDTRPEVTERFELYITGREFG 437
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RF++Q++ K+ + E + Y+D D++ ALEYGMPP GCGIG+DRL+
Sbjct: 438 NGFSELNDAEDQAARFQSQVEAKDSGDDE-AMYFDHDFVRALEYGMPPTGGCGIGIDRLM 496
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S +IRDVILFP LR E+
Sbjct: 497 MLLTDSPSIRDVILFPALRREH 518
>gi|347818363|ref|ZP_08871797.1| lysyl-tRNA synthetase [Verminephrobacter aporrectodeae subsp.
tuberculatae At4]
Length = 515
Score = 530 bits (1365), Expect = e-148, Method: Compositional matrix adjust.
Identities = 241/442 (54%), Positives = 330/442 (74%), Gaps = 5/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF+ LQD S ++ G+IQLY++ + +G +LY FK++D+GDI+GA+GTL K
Sbjct: 79 MLKRVMGKASFVTLQDGSLGEAGGRIQLYVTRDAVGDDLYAAFKHWDLGDIVGAQGTLMK 138
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+K + L+L+TKSLRPLP+KF L+NQE KYR RY+DLI +E R F R++
Sbjct: 139 TRTGELSVKTTQLRLLTKSLRPLPDKFHGLANQEQKYRQRYVDLITDEQARTRFTARSKT 198
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+S +R FM ++ F+EVETP+LH PGGA A+PF+T HN+L +M+LRIAPELYLKRLI+G
Sbjct: 199 VSGLREFMVRHGFLEVETPMLHPIPGGANARPFVTQHNALEQQMYLRIAPELYLKRLIVG 258
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN++FRNEGIS RHNPEFTM+EFYAAY NY+ +M FTE +++++ + G +
Sbjct: 259 GFERVFEINRSFRNEGISVRHNPEFTMLEFYAAYWNYLDVMDFTETLVREMALQATGALQ 318
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
++YQGR +D ++ F +L+I EAI +YT +D + +L S LKK+ +K L+
Sbjct: 319 LNYQGRAVDLAQPFARLSIREAIFQYTEAGAHVD--DAAWLVSALKKLGLT-QEKDRLSA 375
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQ++ F+ET E KLW PT+I +PTEISPLAR +N +TERFEL+I G E++
Sbjct: 376 RSLASLQVLYFQETVEDKLWQPTFIVEHPTEISPLAR-ANDARPEVTERFELYITGRELS 434
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RF Q+ K+ + E + ++D D++ ALEYGMPP GCG+G+DRL+
Sbjct: 435 NGFSELNDAEDQAARFHAQVAAKDGGDDE-AMFFDHDFVRALEYGMPPTGGCGVGIDRLM 493
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S IRDVILFP LR E+
Sbjct: 494 MLLTDSPAIRDVILFPALRRES 515
>gi|222111774|ref|YP_002554038.1| lysyl-tRNA synthetase [Acidovorax ebreus TPSY]
gi|221731218|gb|ACM34038.1| lysyl-tRNA synthetase [Acidovorax ebreus TPSY]
Length = 515
Score = 530 bits (1364), Expect = e-148, Method: Compositional matrix adjust.
Identities = 247/442 (55%), Positives = 329/442 (74%), Gaps = 5/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF LQD S D+ G+IQLY++ + IG+ Y+DFK +D+GDI+GA+GTL K
Sbjct: 79 MLKRVMGKASFATLQDGSLGDTGGRIQLYVTRDAIGEEAYSDFKRWDLGDILGAEGTLMK 138
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+KVS L+L+TKSLRP+P+KF +++QE+KYR RY+DL+ +E R+ F R++
Sbjct: 139 TKTGELSVKVSRLRLLTKSLRPMPDKFHGVADQEVKYRQRYVDLMTDEAARRRFVARSKA 198
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+ SIR FM ++ F+EVETP+LH PGGA AKPF+THHN+L +MFLRIAPELYLKRLI+G
Sbjct: 199 VGSIRSFMMEHGFLEVETPMLHPIPGGANAKPFVTHHNALEQEMFLRIAPELYLKRLIVG 258
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEGIS RHNPEFTM+EFYAAY NY LM FTE +++ + GT +
Sbjct: 259 GFERVFEINRNFRNEGISVRHNPEFTMMEFYAAYWNYRDLMDFTEALVRDAALKATGTLQ 318
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ Y GR +D ++ F++LTI EAI ++T +D + +L S LKK+ +K L+
Sbjct: 319 LTYGGRAVDLAQPFQRLTIREAIYQHTEAGAHVD--DAAWLISALKKLG-MTEEKDRLSI 375
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQ++ FEE E KLW PT+I +PTEISPLAR +++ +TERFEL+I G E
Sbjct: 376 RTLASLQVLYFEEEVEDKLWQPTFIMEHPTEISPLARANDL-RPEVTERFELYITGREFG 434
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RF Q+ K+ + E + ++D D++ ALEYGMPP GCGIG+DRL+
Sbjct: 435 NGFSELNDAEDQAARFHAQVAAKDAGDDE-AMFFDHDFVRALEYGMPPTGGCGIGIDRLM 493
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S +IRDVILFP LR E+
Sbjct: 494 MLLTDSPSIRDVILFPALRREH 515
>gi|395007841|ref|ZP_10391541.1| lysyl-tRNA synthetase (class II) [Acidovorax sp. CF316]
gi|394314142|gb|EJE51087.1| lysyl-tRNA synthetase (class II) [Acidovorax sp. CF316]
Length = 514
Score = 530 bits (1364), Expect = e-148, Method: Compositional matrix adjust.
Identities = 250/443 (56%), Positives = 332/443 (74%), Gaps = 7/443 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD S D+ G+IQLY++ + +G+ Y FK++D+GDI+GA+GT FK
Sbjct: 78 MLKRVMGKASFATVQDGSLGDTGGQIQLYVTRDALGEEAYAAFKHWDLGDIVGAEGTTFK 137
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELSIKV+ L+L+TKSLRPLP+KF +++QE KYR RY+DLI +E RK F R++
Sbjct: 138 TKTGELSIKVTRLRLLTKSLRPLPDKFHGMADQEQKYRQRYVDLITDEQARKRFIARSKA 197
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+S +R FM ++ F+EVETP+LH PGGA AKPF+THHN+L +M+LRIAPELYLKRLI+G
Sbjct: 198 VSGLREFMVEHGFLEVETPMLHPIPGGANAKPFVTHHNALEQEMYLRIAPELYLKRLIVG 257
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+++RNEGIS RHNPEFTM+EFYAAY NY+ LM FTE +I+++ + G+ +
Sbjct: 258 GFERVFEINRSYRNEGISVRHNPEFTMMEFYAAYWNYLDLMDFTETLIREVALKATGSLQ 317
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKK-ILN 299
+ YQGR +D S+ F +LTI EAI +YT +D + +L S LKK+ N++K L+
Sbjct: 318 LTYQGRAVDLSQPFARLTIREAIFQYTEAGAHVD--DAAWLTSALKKLG--LNEEKNKLS 373
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
LQ++ FEET E KLW PT+I +PTEISPLAR +N +TERFEL+I G E
Sbjct: 374 TRSLASLQVLYFEETVEDKLWLPTFIMEHPTEISPLAR-ANDTRPEVTERFELYITGREF 432
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP GCGIG+DRL
Sbjct: 433 GNGFSELNDAEDQAARFHAQVAAKDSGDDE-AMFYDHDFVRALEYGMPPTGGCGIGIDRL 491
Query: 420 IMLLTNSKNIRDVILFPHLRNEN 442
+MLLT+S +IRDVILFP LR E+
Sbjct: 492 MMLLTDSPSIRDVILFPALRRES 514
>gi|347538824|ref|YP_004846248.1| lysyl-tRNA synthetase [Pseudogulbenkiania sp. NH8B]
gi|345642001|dbj|BAK75834.1| lysyl-tRNA synthetase [Pseudogulbenkiania sp. NH8B]
Length = 500
Score = 529 bits (1363), Expect = e-147, Method: Compositional matrix adjust.
Identities = 243/441 (55%), Positives = 335/441 (75%), Gaps = 13/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF LQD SG +IQ+++SN+ G L+ FK++D+GDI+ A+GTLFK
Sbjct: 73 MLKRVMGKASFATLQDGSG-----RIQIFVSNDKTGIELHDQFKHWDMGDIVAARGTLFK 127
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGEL+++ ++L++K++RPLP KF L++QE KYR RY+DLI+NE +R VF KR+QI
Sbjct: 128 TKTGELTVQAGEVRLLSKNIRPLPEKFHGLTDQEQKYRQRYLDLIMNEQSRDVFTKRSQI 187
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+ IR +M ++EVETP++H PGGA AKPF+THHN+L+M ++LRIAPELYLKRL++G
Sbjct: 188 VQGIRSYMVDEGYLEVETPMMHPIPGGATAKPFVTHHNALDMPLYLRIAPELYLKRLVVG 247
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN+NFRNEG+S RHNPEFTM+EFY AY++Y +M+ TE +I+K+ + +GT
Sbjct: 248 GLERVFEINRNFRNEGMSTRHNPEFTMMEFYEAYSDYQRMMEMTEGVIQKLAKELLGTLH 307
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQG+ +D SK FE+LTI AIKKY PQY + L ++ +LK E+ ++ K +L +
Sbjct: 308 IQYQGKTVDLSK-FERLTIAGAIKKYNPQYTDEQLHDRAWLKEEIARL----GGKPVLTD 362
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEE E++LWNPT+I +YP E+SPLAR S+ ++ ITERFELF++G E+A
Sbjct: 363 -GIGGLQLSLFEECAESQLWNPTFIVDYPVEVSPLARGSD-KHPGITERFELFVVGRELA 420
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RF Q+ K+ + E + +YD DYI ALE+G+PP GCGIG+DRL+
Sbjct: 421 NGYSELNDPEDQAARFLAQVQQKDAGDDE-AMHYDADYIRALEFGLPPTGGCGIGIDRLV 479
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT++ +IRDVILFP +R E
Sbjct: 480 MLLTDAPSIRDVILFPQMRAE 500
>gi|437999914|ref|YP_007183647.1| lysyl-tRNA synthetase [Candidatus Kinetoplastibacterium
blastocrithidii (ex Strigomonas culicis)]
gi|451812840|ref|YP_007449293.1| class II lysyl-tRNA synthetase [Candidatus Kinetoplastibacterium
blastocrithidii TCC012E]
gi|429339148|gb|AFZ83570.1| lysyl-tRNA synthetase [Candidatus Kinetoplastibacterium
blastocrithidii (ex Strigomonas culicis)]
gi|451778809|gb|AGF49689.1| class II lysyl-tRNA synthetase [Candidatus Kinetoplastibacterium
blastocrithidii TCC012E]
Length = 508
Score = 529 bits (1362), Expect = e-147, Method: Compositional matrix adjust.
Identities = 261/440 (59%), Positives = 330/440 (75%), Gaps = 8/440 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR+MGK SF ++D S +IQ+YIS + IG+ Y +FK +D+GDI+ +G +FK
Sbjct: 74 MLKRIMGKASFSTIKD-----STNRIQIYISQKNIGEEAYNNFKQFDLGDILIIEGKVFK 128
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELSI V S+ L++K++RPLP KF +S+ IKYR RYIDLI++E T+K F+ R++I
Sbjct: 129 TNKGELSINVKSISLVSKAIRPLPEKFHGISDHNIKYRQRYIDLIVSEETKKTFELRSKI 188
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I++IR +M K FMEVETP+LH PGGA AKPF THHNSLNM M+LRIAPELYLKRLI+G
Sbjct: 189 IANIRQYMSKEGFMEVETPMLHKIPGGAAAKPFTTHHNSLNMDMYLRIAPELYLKRLIVG 248
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF+++FE+N+NFRNEG SPRHNPEFTM+EFYA YT+Y W+M FTE +I++I +
Sbjct: 249 GFDRVFELNRNFRNEGTSPRHNPEFTMMEFYATYTDYKWMMDFTELLIREISISINNKNY 308
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
IDYQG ++ SK FE+L+I EAI KY +Y+ L + FL+ EL +I+ K + K L
Sbjct: 309 IDYQGNTINLSKPFERLSICEAICKYNNKYDLEQLNDYKFLQKELHRIDNKIS-KDFLML 367
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
K LQL FE+TTE K+W+PTYI +YP E SPLAR+S+ N ITERFELFI G EIA
Sbjct: 368 SKLGELQLCFFEKTTEEKVWDPTYIIDYPVETSPLARQSD-ANKKITERFELFISGKEIA 426
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNE-INGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELNDPEEQ+ R Q D KNE I+ ++D+DYI ALEYGMPP GCGIG+DRL
Sbjct: 427 NGFSELNDPEEQAKRLLEQADSKNENIDDSHEMFFDSDYITALEYGMPPTGGCGIGIDRL 486
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+MLLTN NI+DVILFPHLR
Sbjct: 487 VMLLTNKSNIKDVILFPHLR 506
>gi|296134907|ref|YP_003642149.1| lysyl-tRNA synthetase [Thiomonas intermedia K12]
gi|295795029|gb|ADG29819.1| lysyl-tRNA synthetase [Thiomonas intermedia K12]
Length = 506
Score = 529 bits (1362), Expect = e-147, Method: Compositional matrix adjust.
Identities = 241/442 (54%), Positives = 320/442 (72%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF LQD G+IQ+++SN++ G+ + FK+YD+GD IG +G LFK
Sbjct: 73 MLKRVMGKASFATLQD-----GTGRIQIHVSNDVTGEEAHAAFKHYDLGDWIGCEGVLFK 127
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGEL+I+ ++L+ KSLRPLP+KF L + E +YR RY+DLI+ +R+ F R++
Sbjct: 128 TRTGELTIRAEQVRLLVKSLRPLPDKFHGLEDVETRYRQRYVDLIVTPESRERFALRSKA 187
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+++R+ M FMEVETP+LH PGGA AKPFITHHN+L+ +M+LRIAPELYLKRL++G
Sbjct: 188 IAALRNEMLAAGFMEVETPMLHPIPGGAAAKPFITHHNALDQQMYLRIAPELYLKRLLVG 247
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAA+ Y M FTE +I+ GT
Sbjct: 248 GFERVFEINRNFRNEGLSPRHNPEFTMMEFYAAWWTYRDQMDFTEALIRNTAQLTCGTAV 307
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ +QGR LD S F +LT+ +AI+K+ P Y + L + FL+ EL++++ K L
Sbjct: 308 LTHQGRTLDLSAPFARLTLTQAIQKHAPDYTDAQLADDGFLRGELRRLDADHAPHK-LKG 366
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
+ LQL LFE+ E LW PT+I +YP E+SPLAR S+ + N TERFELFI G EIA
Sbjct: 367 MGLGALQLALFEQVAEHLLWEPTFIVDYPVEVSPLARASDADANT-TERFELFITGREIA 425
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF++Q+ K E + + Y+D DY+ ALEYGMPPA GCGIG+DRL+
Sbjct: 426 NGFSELNDPEDQAARFQSQVQAK-EAGDDEAMYFDADYVQALEYGMPPAGGCGIGIDRLV 484
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT++ +IRDVILFP LR E
Sbjct: 485 MLLTDAPSIRDVILFPALRFEG 506
>gi|365089553|ref|ZP_09328326.1| lysyl-tRNA synthetase [Acidovorax sp. NO-1]
gi|363416683|gb|EHL23784.1| lysyl-tRNA synthetase [Acidovorax sp. NO-1]
Length = 514
Score = 529 bits (1362), Expect = e-147, Method: Compositional matrix adjust.
Identities = 246/442 (55%), Positives = 332/442 (75%), Gaps = 5/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD S + G+IQLY++ + +G++LY FK++D+GDI+GA+GTL K
Sbjct: 78 MLKRVMGKASFATIQDGSLGEVGGRIQLYVTRDALGEDLYAAFKHWDLGDIVGAEGTLMK 137
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+KV+SL+L+TKSLRPLP+KF +++QE KYR RY+DLI +E RK F R++
Sbjct: 138 TKTGELSVKVTSLRLLTKSLRPLPDKFHGMADQEQKYRQRYVDLITDEQARKRFMARSKA 197
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+S +R FM + F+EVETP+LH PGGA AKPF+THHN+L +M+LRIAPELYLKRLI+G
Sbjct: 198 VSVLREFMVSHGFLEVETPMLHPIPGGANAKPFVTHHNALEQEMYLRIAPELYLKRLIVG 257
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+++RNEGIS RHNPEFTM+EFYAAY NY+ LM FTE +I+++ + G+ +
Sbjct: 258 GFERVFEINRSYRNEGISVRHNPEFTMMEFYAAYWNYLDLMDFTETLIREVALKATGSLQ 317
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQGR +D ++ F +LTI EAI ++T +D + +L S LKK+ +K L+
Sbjct: 318 MTYQGRAVDLTQPFARLTIREAIFQHTEAGAHVD--DAAWLISALKKLG-MTEEKDKLSA 374
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQ++ FEET E KLW PT+I +PTEISPLAR +++ +TERFEL+I G E
Sbjct: 375 RTLASLQVLYFEETVEDKLWQPTFIMEHPTEISPLARANDL-RPEVTERFELYITGREFG 433
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP GCGIG+DRL+
Sbjct: 434 NGFSELNDAEDQAARFHAQVAAKDSGDDE-AMFYDHDFVRALEYGMPPTGGCGIGIDRLM 492
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S +IRDVILFP LR E+
Sbjct: 493 MLLTDSPSIRDVILFPALRRES 514
>gi|407938165|ref|YP_006853806.1| lysyl-tRNA ligase [Acidovorax sp. KKS102]
gi|407895959|gb|AFU45168.1| lysyl-tRNA ligase [Acidovorax sp. KKS102]
Length = 514
Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 247/442 (55%), Positives = 330/442 (74%), Gaps = 5/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD S + G+IQLY++ + +G++LY FK++D+GDI+GA+GTL
Sbjct: 78 MLKRVMGKASFATIQDGSLGEVGGRIQLYVTRDAVGEDLYAAFKHWDLGDILGAEGTLMN 137
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+KV+SL+L+TKSLRPLP+KF +++QE KYR RY+DLI +E RK F R++
Sbjct: 138 TKTGELSVKVTSLRLLTKSLRPLPDKFHGMADQEQKYRQRYVDLITDEQARKRFVARSKA 197
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+S +R FM + F+EVETP+LH PGGA AKPF+THHN+L +M+LRIAPELYLKRLI+G
Sbjct: 198 VSGLREFMVSHGFLEVETPMLHPIPGGANAKPFVTHHNALEQEMYLRIAPELYLKRLIVG 257
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+++RNEGIS RHNPEFTM+EFYAAY NY+ LM FTE +I+++ + G+ +
Sbjct: 258 GFERVFEINRSYRNEGISVRHNPEFTMMEFYAAYWNYLDLMDFTETLIREVALKATGSLQ 317
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQGR +D S+ F +LTI EAI ++T +D + +L S LKK+ +K L+
Sbjct: 318 MTYQGRAVDLSQPFARLTIREAIFQHTEAGAHVD--DAAWLISALKKLG-MTEEKDKLST 374
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQ++ FEET E KLW PT+I +PTEISPLAR +N +TERFEL+I G E
Sbjct: 375 RTLASLQVLYFEETVEDKLWQPTFIMEHPTEISPLAR-ANDNRPEVTERFELYITGREFG 433
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP GCGIG+DRL+
Sbjct: 434 NGFSELNDAEDQAARFHAQVAAKDSGDDE-AMFYDHDFVRALEYGMPPTGGCGIGIDRLM 492
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S +IRDVILFP LR E+
Sbjct: 493 MLLTDSPSIRDVILFPALRRES 514
>gi|398808569|ref|ZP_10567432.1| lysyl-tRNA synthetase (class II) [Variovorax sp. CF313]
gi|398087601|gb|EJL78187.1| lysyl-tRNA synthetase (class II) [Variovorax sp. CF313]
Length = 520
Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 249/442 (56%), Positives = 329/442 (74%), Gaps = 10/442 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD + +IQLY++ + +G+++Y DFK +D+GDI+GA+GTL K
Sbjct: 89 MLKRVMGKASFATVQD-----ATSRIQLYVTRDAVGEDVYADFKRWDLGDIVGAEGTLMK 143
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+KV+ L+L+TKSLRPLP+KF +++QE KYR RY+DLI +E R F R++
Sbjct: 144 TKTGELSVKVTKLRLLTKSLRPLPDKFHGMADQEQKYRQRYVDLITDETARARFTARSKA 203
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+S++R FM NDF+EVETP+LH PGGA AKPF THHN+L+ +MFLRIAPELYLKRLI+G
Sbjct: 204 VSALREFMVANDFLEVETPMLHPIPGGANAKPFKTHHNALDQEMFLRIAPELYLKRLIVG 263
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+++RNEGIS RHNPEFTM+EFYAAY NY LM FTE +I+ I +GT +
Sbjct: 264 GFERVFEINRSYRNEGISVRHNPEFTMMEFYAAYWNYRDLMDFTETLIRTIADKAVGTQQ 323
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ Y G+ +D ++ FE+LTI EAI K+T + +D + +L + L+KI +K L+
Sbjct: 324 LTYGGKAVDLTQPFERLTIREAILKHTDAGDGVD--DSAWLINALRKIGLS-EEKDKLSQ 380
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQ+M FEET E KLW PT+I +PTEISPLAR +N E +TERFEL+I G E
Sbjct: 381 RSLASLQVMYFEETVEEKLWQPTFIMEHPTEISPLAR-ANDERPEVTERFELYITGREFG 439
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP GCGIG+DRL+
Sbjct: 440 NGFSELNDAEDQAARFNAQVAAKDSGDDE-AMFYDHDFVRALEYGMPPTGGCGIGIDRLM 498
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S +IRDVILFP LR E+
Sbjct: 499 MLLTDSPSIRDVILFPALRRES 520
>gi|319943697|ref|ZP_08017978.1| lysine--tRNA ligase [Lautropia mirabilis ATCC 51599]
gi|319742930|gb|EFV95336.1| lysine--tRNA ligase [Lautropia mirabilis ATCC 51599]
Length = 513
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 244/444 (54%), Positives = 327/444 (73%), Gaps = 16/444 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
+LKRV GK SF LQD + G+IQL+++++ +G + FK++D+GDI+ A+GTLFK
Sbjct: 84 VLKRVQGKASFATLQD-----ATGRIQLWMNDDGVGAEAHDAFKHWDLGDIVAAEGTLFK 138
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T GELSI+ + ++L+TKSLRPLP+KF L++QE++YR RY+DL+ NE+TR+ F R++
Sbjct: 139 TKKGELSIRCNMVRLLTKSLRPLPDKFHGLADQEMRYRQRYVDLMSNESTRQTFIIRSKA 198
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I++IR FM N +EVETP+L PGGA A+PF THHN+L+ MFLRIAPELYLKRLI+G
Sbjct: 199 IAAIRQFMVDNGCLEVETPMLQPIPGGATARPFQTHHNALDQAMFLRIAPELYLKRLIVG 258
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+ W+M +TE++I+ G+T
Sbjct: 259 GFERVFEINRNFRNEGLSPRHNPEFTMMEFYAAYTDCRWMMDYTEQVIRHAAQAARGSTV 318
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKK--INPKFNQKKIL 298
++YQGR +D SK F +LTI+EAI+ + P+ L + +L++EL K + P
Sbjct: 319 LEYQGRPVDLSKPFARLTIVEAIRTHAPELPAEKLDDAAWLRAELAKHGVEPP------- 371
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
N LQL LFEE E+KLW+PT+I +YP E+SPLAR S+ + ITERFELF+ G E
Sbjct: 372 ANAGVGALQLALFEEVAESKLWDPTFIIDYPAEVSPLARSSD-HDPEITERFELFMTGRE 430
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
ANGFSELNDPE+Q+ RF+ Q++ K E + + YYD DYI ALEYGMPP G GIG+DR
Sbjct: 431 FANGFSELNDPEDQAERFRKQVEAK-EAGDDEAMYYDADYIRALEYGMPPTGGVGIGIDR 489
Query: 419 LIMLLTNSKNIRDVILFPHLRNEN 442
L+MLLT+S IRDVILFP L+ E
Sbjct: 490 LMMLLTDSPTIRDVILFPALKREQ 513
>gi|410692420|ref|YP_003623041.1| Lysyl-tRNA synthetase, heat inducible (Lysine--tRNA ligase) (LysRS)
[Thiomonas sp. 3As]
gi|294338844|emb|CAZ87178.1| Lysyl-tRNA synthetase, heat inducible (Lysine--tRNA ligase) (LysRS)
[Thiomonas sp. 3As]
Length = 509
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 240/442 (54%), Positives = 319/442 (72%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF LQD G+IQ+++SN++ G+ + FK+YD+GD IG G LFK
Sbjct: 76 MLKRVMGKASFATLQD-----GTGRIQIHVSNDVTGEEAHAAFKHYDLGDWIGCDGVLFK 130
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGEL+I+ ++L+ KSLRPLP+KF L + E +YR RY+DLI+ +R+ F R++
Sbjct: 131 TRTGELTIRAEQVRLLVKSLRPLPDKFHGLEDVETRYRQRYVDLIVTPESRERFALRSKA 190
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+++R+ M FMEVETP+LH PGGA AKPFITHHN+L+ +M+LRIAPELYLKRL++G
Sbjct: 191 IAALRNEMLAAGFMEVETPMLHPIPGGAAAKPFITHHNALDQQMYLRIAPELYLKRLLVG 250
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAA+ Y M FTE +I+ GT
Sbjct: 251 GFERVFEINRNFRNEGLSPRHNPEFTMMEFYAAWWTYRDQMDFTEALIRNTAQLTCGTAV 310
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ +QGR LD S F +LT+ +AI+K+ P Y + L + FL+ EL++++ K L
Sbjct: 311 LTHQGRTLDLSAPFARLTLTQAIQKHAPDYTDAQLADDGFLRGELRRLDADHAPHK-LKG 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
+ LQL LFE+ E LW PT+I +YP E+SPLAR ++ + N TERFELFI G EIA
Sbjct: 370 MGLGALQLALFEQVAEHMLWEPTFIVDYPVEVSPLARAADADANT-TERFELFITGREIA 428
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF++Q+ K E + + Y+D DY+ ALEYGMPPA GCGIG+DRL+
Sbjct: 429 NGFSELNDPEDQAARFQSQVQAK-EAGDDEAMYFDADYVRALEYGMPPAGGCGIGIDRLV 487
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT++ +IRDVILFP LR E
Sbjct: 488 MLLTDAPSIRDVILFPALRFEG 509
>gi|388566687|ref|ZP_10153130.1| LysS protein [Hydrogenophaga sp. PBC]
gi|388266031|gb|EIK91578.1| LysS protein [Hydrogenophaga sp. PBC]
Length = 519
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 245/441 (55%), Positives = 330/441 (74%), Gaps = 5/441 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF LQD S +S G+IQ+Y++N+ +G+ + FK++D+GDI+ A+G LF+
Sbjct: 83 MLKRVMGKASFATLQDASLGESGGRIQIYLNNDSVGEAQHGAFKHWDLGDIVAAEGVLFR 142
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGEL+I ++L+TKSLRPLP+KF +++QEIKYR RY+DL+ +E R+ F R+Q
Sbjct: 143 TRTGELTIHADKIRLLTKSLRPLPDKFHGVADQEIKYRQRYVDLMTDEAARRRFVARSQA 202
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+++R FM + F+EVETP+LH PGGA AKPF+THHN+L+ +MFLRIAPELYLKRL++G
Sbjct: 203 ITALRQFMVSHGFLEVETPMLHPIPGGANAKPFVTHHNALDQEMFLRIAPELYLKRLLVG 262
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF+++FEIN+NFRNEGIS RHNPEFTM+EFYAAY NY LM F+E++I+ ++ G +
Sbjct: 263 GFDRVFEINRNFRNEGISVRHNPEFTMMEFYAAYWNYNDLMDFSEQLIRHVVRTVRGEGE 322
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQGR +D FE+LTI +AI KYT +D + +L+ +L+K+ +K L+
Sbjct: 323 VTYQGRAVDIDSPFERLTIRDAIVKYTDAGANVDEAD--WLRGQLRKLGLT-EEKDQLST 379
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQ+M FEE E++LWNPT+I +PTEISPLAR +N E +TERFEL+I G E
Sbjct: 380 RSLASLQVMFFEEKVESELWNPTFIMEHPTEISPLAR-ANDERPEVTERFELYITGREFG 438
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
N FSELND E+Q+ RF+ Q D K+ + E + ++D DYI ALEYGMPPA GCGIG+DRL+
Sbjct: 439 NAFSELNDAEDQAARFQAQADAKDGGDDE-AMHFDADYIRALEYGMPPAGGCGIGIDRLM 497
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S +IRDVILFP LR E
Sbjct: 498 MLLTDSPSIRDVILFPALRRE 518
>gi|91789471|ref|YP_550423.1| lysyl-tRNA synthetase [Polaromonas sp. JS666]
gi|91698696|gb|ABE45525.1| lysyl-tRNA synthetase [Polaromonas sp. JS666]
Length = 516
Score = 526 bits (1356), Expect = e-147, Method: Compositional matrix adjust.
Identities = 248/441 (56%), Positives = 328/441 (74%), Gaps = 5/441 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF LQD S S G+IQ+YI+NE +G+ ++ FK++D+GDI+ A GTLFK
Sbjct: 80 MLKRVMGKASFATLQDASFGPSGGRIQVYINNEGVGEEVHNAFKHWDLGDIVAATGTLFK 139
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELSI +S++L+TKSLRPLP+KF +++QE+KYR RY+DLI++E+ RK F R++
Sbjct: 140 TKTGELSIHATSIRLVTKSLRPLPDKFHGMADQEVKYRQRYVDLIMDESARKRFMARSKA 199
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+S +R FM +DF+EVETP+LH PGGA A+PF THHN+L+ +MFLRIAPELYLKRLI+G
Sbjct: 200 VSGLREFMVAHDFLEVETPMLHPIPGGANARPFKTHHNALDQEMFLRIAPELYLKRLIVG 259
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+++RNEGIS RHNPEFTM+EFYAA+ NY LM FTE +I+ G+ +
Sbjct: 260 GFERVFEINRSYRNEGISVRHNPEFTMMEFYAAWWNYSDLMTFTEALIRDAAQKVTGSLQ 319
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ Y G+ +D S+ FE+LTI EAI K+T +D + ++L + LKK+ K L+
Sbjct: 320 LSYGGKAVDLSQPFERLTIREAILKHTEAGEHVD--DMVWLTNALKKLGAT-EAKDRLST 376
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQ++ FEET E KLW PT+I +PTEISPLAR +N +TERFEL+I G E
Sbjct: 377 RSLASLQVLYFEETVEEKLWQPTFIMEHPTEISPLAR-ANDARPEVTERFELYITGREFG 435
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND EEQ+ RF Q+ K++ + E + +YD D+I ALEYGMPP GCG+G+DRL+
Sbjct: 436 NGFSELNDAEEQAARFNAQVAAKDDGDDE-AMFYDHDFIRALEYGMPPTGGCGVGIDRLM 494
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S +IRDVILFP LR E
Sbjct: 495 MLLTDSPSIRDVILFPALRRE 515
>gi|74316911|ref|YP_314651.1| lysyl-tRNA synthetase [Thiobacillus denitrificans ATCC 25259]
gi|123745516|sp|Q3SKD9.1|SYK_THIDA RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|74056406|gb|AAZ96846.1| lysyl-tRNA synthetase, class-2 [Thiobacillus denitrificans ATCC
25259]
Length = 501
Score = 526 bits (1354), Expect = e-146, Method: Compositional matrix adjust.
Identities = 241/441 (54%), Positives = 323/441 (73%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF LQD SG +IQ+Y+SN++ G + + FK +D+GD +G GTLFK
Sbjct: 72 MLKRVMGKASFATLQDMSG-----RIQVYVSNDLTGLDAHEAFKRWDLGDFVGVSGTLFK 126
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GEL+I+ S++L++K+LRPLP KF L++QE KYR RY+DLI N++ R F +R++I
Sbjct: 127 TNKGELTIQAKSVRLLSKALRPLPEKFHGLADQEQKYRQRYLDLITNDDARSTFVRRSKI 186
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I +IR FM + F+EVETP++H PGGA AKPF+THHN+L+M++FLRIAPELYLKRL++G
Sbjct: 187 IQAIREFMTGHGFLEVETPMMHPIPGGAAAKPFVTHHNALDMELFLRIAPELYLKRLVVG 246
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY Y +LM FTE +I+ + G+T
Sbjct: 247 GFEKVFEINRNFRNEGLSTRHNPEFTMMEFYEAYREYRYLMDFTEALIRHTAVAATGSTT 306
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQG ++ F++LTI+EA++KY P+Y L ++ +L ++ + K+ + L
Sbjct: 307 ISYQGSTIELGTPFDRLTIVEAVRKYHPEYTVEQLNDRDWLTAQFTAMKAKYREHDGLGG 366
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL FEETTE L PT+I +YP E+SPLAR+S+ + ITERFELFI G E+A
Sbjct: 367 -----LQLTFFEETTEALLVQPTFIVDYPAEVSPLARRSDTQ-PEITERFELFITGREMA 420
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RF Q+ K E E + +YD D+I ALE+G+PP GCGIG+DRL+
Sbjct: 421 NGFSELNDAEDQAERFMEQVRAK-EAGDEEAMHYDADFIRALEHGLPPTGGCGIGIDRLV 479
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S +IRDVILFP +R E
Sbjct: 480 MLLTDSPSIRDVILFPQMRRE 500
>gi|34496515|ref|NP_900730.1| lysyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
gi|39932059|sp|Q7NZ62.1|SYK_CHRVO RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|34102369|gb|AAQ58735.1| lysyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
Length = 502
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 233/441 (52%), Positives = 329/441 (74%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF LQD SG +IQ +IS + +G+++Y DFK +D+GDI+ KG LFK
Sbjct: 74 MLKRVMGKASFATLQDVSG-----RIQAFISRDNVGEDVYADFKRWDLGDIVAVKGMLFK 128
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGEL+++ + +++++K++RPLP KF +++QE KYR RY DLI++E +R+ F KR++I
Sbjct: 129 TKTGELTVQATEVRMLSKNIRPLPEKFHGIADQETKYRQRYADLIMSEESRETFIKRSKI 188
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+ +R M ++EVETP++H PGGA AKPF+THHN+L+M ++LRIAPELYLKRL++G
Sbjct: 189 VQKVRDVMVGEGYLEVETPMMHPIPGGASAKPFVTHHNALDMPLYLRIAPELYLKRLVVG 248
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN+NFRNEG+S RHNPEFTMIEFY AY++Y +M+ TE +I++ + G+T
Sbjct: 249 GLERVFEINRNFRNEGMSTRHNPEFTMIEFYEAYSDYQRMMEMTETIIRECALVACGSTT 308
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQG+ +D K F++ TI++AIK Y PQY + L + ++ SE+K++ K L +
Sbjct: 309 VTYQGKEVDLGKPFDRFTIVQAIKHYNPQYTDAQLSDAAWVASEIKRLGGKLPPAPGLGS 368
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEE E+ LWNPT+I +YP E+SPLAR S+ + +TERFELFI+G E A
Sbjct: 369 -----LQLALFEECAESLLWNPTFIIDYPVEVSPLARGSDTQ-PGLTERFELFIVGREHA 422
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RF+ Q+ K+ + E + +YD DYI A+EYG+PP GCGIG+DRL+
Sbjct: 423 NGYSELNDPEDQAARFQAQVAQKDAGDDE-AMHYDADYIRAMEYGLPPTGGCGIGIDRLV 481
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT++ +IRDVILFPH+R E
Sbjct: 482 MLLTDAPSIRDVILFPHMRPE 502
>gi|325981413|ref|YP_004293815.1| lysyl-tRNA synthetase [Nitrosomonas sp. AL212]
gi|325530932|gb|ADZ25653.1| lysyl-tRNA synthetase [Nitrosomonas sp. AL212]
Length = 501
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 250/442 (56%), Positives = 329/442 (74%), Gaps = 12/442 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
+LKRVMGK SF +QD +G +IQLYISN+ G+ + FK+YD+GDI+GA+G LFK
Sbjct: 72 VLKRVMGKASFATIQDMTG-----RIQLYISNDHTGETAHAAFKHYDLGDILGAQGILFK 126
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELSI+V+ L+L+TKSLRPLP KF L++QE KYR RY+DLI NE TR+VF R+++
Sbjct: 127 TKTGELSIRVTELQLLTKSLRPLPEKFHGLADQEQKYRQRYLDLITNEETRRVFTIRSRV 186
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I +IR F + +++EVETP++H PGGA AKPF THHN+L+M +FLRIAPELYLKRL++G
Sbjct: 187 IQAIREFFVERNYLEVETPMMHPIPGGASAKPFSTHHNALDMALFLRIAPELYLKRLVVG 246
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G K+FEIN+NFRNEGIS RHNPEFTM+EFY AY ++ +LM FTE+M+ +GTT
Sbjct: 247 GMEKVFEINRNFRNEGISTRHNPEFTMLEFYEAYQDHTYLMDFTEQMLAYTAQKVLGTTH 306
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQG+ +D S+ F +LTII+AI+K+ P Y L ++ +L L+ + +N L
Sbjct: 307 LTYQGKTMDLSRPFMRLTIIQAIQKFHPHYTAAQLNDRNYLIQALEALKIHYNPNDGLGG 366
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LF+ETTE L+ PT+I +YP E+SPLAR+ N N +IT+RFEL+I G EIA
Sbjct: 367 -----LQLSLFDETTEHLLFEPTFIVDYPAEVSPLARR-NDNNPDITDRFELYIAGREIA 420
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF Q K+ + E + +YD DYI ALEYG+PP +G GIG+DRL+
Sbjct: 421 NGFSELNDPEDQAARFLEQAKAKDAGDSE-AMHYDADYIRALEYGLPPTAGEGIGIDRLV 479
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S +IRDVILFP LR E+
Sbjct: 480 MLLTDSPSIRDVILFPQLRRED 501
>gi|319763832|ref|YP_004127769.1| lysyl-tRNA synthetase [Alicycliphilus denitrificans BC]
gi|330823904|ref|YP_004387207.1| lysyl-tRNA synthetase [Alicycliphilus denitrificans K601]
gi|317118393|gb|ADV00882.1| lysyl-tRNA synthetase [Alicycliphilus denitrificans BC]
gi|329309276|gb|AEB83691.1| lysyl-tRNA synthetase [Alicycliphilus denitrificans K601]
Length = 515
Score = 525 bits (1351), Expect = e-146, Method: Compositional matrix adjust.
Identities = 244/442 (55%), Positives = 327/442 (73%), Gaps = 5/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF LQD S ++ G+IQLY++ + +G+++Y DFK +D+GDI+GA+GTL K
Sbjct: 79 MLKRVMGKASFATLQDGSLGETGGRIQLYVTRDGVGEDVYADFKRWDLGDIVGAEGTLMK 138
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+KV+ L+L+TKSLRP+P+KF +++QE+KYR RY+DL+ +E R+ F R++
Sbjct: 139 TKTGELSVKVTRLRLLTKSLRPMPDKFHGVADQEVKYRQRYVDLMTDEAARRRFVARSKA 198
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I IR FM ++ F+EVETP+LH PGGA A+PF+THHN+L +MFLRIAPELYLKRLI+G
Sbjct: 199 IGGIRAFMIEHGFLEVETPMLHPIPGGANARPFVTHHNALEQEMFLRIAPELYLKRLIVG 258
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEGIS RHNPEFTM+EFYAAY NY LM FTE++++ + T +
Sbjct: 259 GFERVFEINRNFRNEGISVRHNPEFTMMEFYAAYWNYRDLMDFTEELVRDAALKATDTLQ 318
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ Y GR +D S+ F +LTI EAI +YT +D + +L S LKK+ +K L+
Sbjct: 319 LTYGGRAVDLSQPFARLTIREAIYQYTEAGAHVD--DAAWLVSALKKLG-MTEEKDRLST 375
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQ++ FEE E KLW PT+I +PTEISPLAR +++ +TERFEL+I G E
Sbjct: 376 RSLASLQVLYFEEEVEDKLWQPTFIMEHPTEISPLARANDL-RPEVTERFELYITGREFG 434
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RF Q+ K+ + E + ++D D++ ALEYGMPP GCGIG+DRL+
Sbjct: 435 NGFSELNDAEDQAARFNAQVAAKDSGDDE-AMFFDHDFVRALEYGMPPTGGCGIGIDRLM 493
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S +IRDVILFP LR E
Sbjct: 494 MLLTDSPSIRDVILFPALRREQ 515
>gi|121605941|ref|YP_983270.1| lysyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
gi|120594910|gb|ABM38349.1| lysyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
Length = 521
Score = 524 bits (1349), Expect = e-146, Method: Compositional matrix adjust.
Identities = 248/441 (56%), Positives = 326/441 (73%), Gaps = 5/441 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF LQD S + G+IQLYI+N +G+ ++ FK++D+GDI+ A G LF+
Sbjct: 85 MLKRVMGKASFATLQDASFGPTGGRIQLYINNAGVGEEVHAAFKHWDLGDIVAATGLLFR 144
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELSI S++L+TKSLRPLP+KF +++QE+KYR RY+DLI++E RK F R++
Sbjct: 145 TKTGELSIHADSIRLVTKSLRPLPDKFHGMADQEVKYRQRYVDLIMDEAARKRFMARSKA 204
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+S IR FM NDF+EVETP+LH PGGA AKPF THHN+L+ +M+LRIAPELYLKRLI+G
Sbjct: 205 VSGIREFMVANDFLEVETPMLHPIPGGANAKPFKTHHNALDQEMYLRIAPELYLKRLIVG 264
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+++RNEGIS RHNPEFTM+EFYAA+ NY LM FTE +I+ G+ +
Sbjct: 265 GFERVFEINRSYRNEGISVRHNPEFTMMEFYAAWWNYTDLMTFTEALIRDAAQKVCGSLQ 324
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ Y G+ +D S+ FE+LTI EAI K+T ++D + ++L + LKK+ +K L+
Sbjct: 325 LSYAGKPVDLSQPFERLTIREAILKHTEAGEQVD--DAVWLTNALKKLGLN-EEKNRLSG 381
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQ++ FEE E KLW PT+I +PTEISPLAR +N E +TERFEL+I G E
Sbjct: 382 RSLASLQVLYFEELVEEKLWQPTFIMEHPTEISPLAR-ANDERPEVTERFELYITGREFG 440
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND EEQ+VRF Q+ K+ + E + +YD D+I ALEYGMPP GCG+G+DRL+
Sbjct: 441 NGFSELNDAEEQAVRFNAQVHAKDSGDDE-AMFYDHDFIRALEYGMPPTGGCGVGIDRLM 499
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S +IRDVILFP LR E
Sbjct: 500 MLLTDSPSIRDVILFPALRRE 520
>gi|89900573|ref|YP_523044.1| lysyl-tRNA synthetase [Rhodoferax ferrireducens T118]
gi|89345310|gb|ABD69513.1| lysyl-tRNA synthetase [Rhodoferax ferrireducens T118]
Length = 520
Score = 523 bits (1348), Expect = e-146, Method: Compositional matrix adjust.
Identities = 250/450 (55%), Positives = 325/450 (72%), Gaps = 17/450 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF LQD S G+IQLYI E +G +Y FK++D+GDI+ A+G +FK
Sbjct: 78 MLKRVMGKASFATLQD-----STGRIQLYIKGEDVGAEVYASFKHWDLGDIVAAEGKIFK 132
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELSI +SL+L+TKSLRP+P+KF +++QE KYR RY+DL+++E R F R++
Sbjct: 133 TKTGELSIHATSLRLLTKSLRPMPDKFHGMNDQETKYRQRYVDLMMDETARARFTARSKA 192
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+S IR FM +DF+EVETP+LH PGGA AKPF THHN+L+ +MFLRIAPELYLKRLI+G
Sbjct: 193 VSGIREFMVAHDFLEVETPMLHPIPGGANAKPFTTHHNALDQQMFLRIAPELYLKRLIVG 252
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN++FRNEGIS RHNPEFTM+EFYAAY +Y LM FTEK+I+ +GT +
Sbjct: 253 GFERVFEINRSFRNEGISVRHNPEFTMMEFYAAYWDYQDLMTFTEKLIRDAAQKAVGTLE 312
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEID---------LQNKLFLKSELKKINPK 291
+ Y GR +D ++ FE+LTI EAI K+T E++ + N +L S L+K+
Sbjct: 313 LSYGGRAVDLTQPFERLTIHEAICKFTEAGQELEGANLDGCLKVDNAAWLISALRKLGLT 372
Query: 292 FNQKKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFE 351
+ K L+ LQ++ FEET E KLW PT+I +P EISPLAR S+ +TERFE
Sbjct: 373 EGKHK-LSTRSLASLQVLYFEETVEEKLWQPTFICEHPVEISPLARASD-HKPGVTERFE 430
Query: 352 LFIIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASG 411
L+I G E NGFSELND EEQ+ RF Q+ K++ + E + YYD D+I ALEYGMPP G
Sbjct: 431 LYITGREFGNGFSELNDAEEQASRFHAQVAAKDDGDDE-AMYYDHDFIRALEYGMPPTGG 489
Query: 412 CGIGVDRLIMLLTNSKNIRDVILFPHLRNE 441
CG+G+DRL+MLLT+S +IRDVILFP LR+E
Sbjct: 490 CGVGLDRLMMLLTDSSSIRDVILFPALRHE 519
>gi|451936363|ref|YP_007460217.1| lysyl-tRNA synthetase [Candidatus Kinetoplastibacterium oncopeltii
TCC290E]
gi|451777286|gb|AGF48261.1| lysyl-tRNA synthetase [Candidatus Kinetoplastibacterium oncopeltii
TCC290E]
Length = 508
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 263/440 (59%), Positives = 331/440 (75%), Gaps = 8/440 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR+MGK SF +QD S G+IQ+YIS + + + +Y DFK +D+GDI+ +G +FK
Sbjct: 74 MLKRIMGKASFSTIQD-----STGRIQIYISKKNVDEKIYNDFKQFDLGDILSIEGRVFK 128
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELSI V S+ LI+K++RPLP KF +S+ IKYR RYIDLI+ E T+K F+ R++I
Sbjct: 129 TNKGELSINVKSISLISKAIRPLPEKFHGISDPNIKYRQRYIDLIVTEETKKTFELRSKI 188
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I++IR M K FMEVETP+LH PGGA AKPF THHNSLNM M+LRIAPELYLKRLI+G
Sbjct: 189 ITNIRQHMSKEGFMEVETPMLHTIPGGAAAKPFTTHHNSLNMDMYLRIAPELYLKRLIVG 248
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF+K+FE+N+NFRNEGISPRHNPEFTM+EFYA YT+Y W+M FTE++I +I +
Sbjct: 249 GFDKVFELNRNFRNEGISPRHNPEFTMMEFYATYTDYNWMMNFTERLICEISIAINNKNY 308
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+DYQG+ ++ SK FE+L I AI KY +YN L + FL+ EL I+ K K L +
Sbjct: 309 LDYQGKTINLSKPFERLNIRSAICKYNKKYNIEQLNDYAFLQEELNLID-KMIPKDFLKS 367
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
K LQL LFE+TTE K+W+PTYI +YP E SPLAR+S+I+ ITERFELFI G EIA
Sbjct: 368 SKLGELQLCLFEKTTEEKIWDPTYIIDYPIETSPLARQSDID-KKITERFELFIAGKEIA 426
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSS-YYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELNDPEEQ+ R Q++ KNE + E ++D+DYI ALEYGMPP GCGIG+DRL
Sbjct: 427 NGFSELNDPEEQARRLLEQVENKNENSEENHQMFFDSDYITALEYGMPPTGGCGIGIDRL 486
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML+TN NI+DVILFPHLR
Sbjct: 487 VMLITNKSNIKDVILFPHLR 506
>gi|239814417|ref|YP_002943327.1| lysyl-tRNA synthetase [Variovorax paradoxus S110]
gi|259511538|sp|C5CSG3.1|SYK_VARPS RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|239800994|gb|ACS18061.1| lysyl-tRNA synthetase [Variovorax paradoxus S110]
Length = 520
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 249/442 (56%), Positives = 326/442 (73%), Gaps = 10/442 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD + +IQLY++ + IG+ Y +FK +D+GDI+GA+GTL K
Sbjct: 89 MLKRVMGKASFATVQD-----ATSRIQLYVTRDAIGEEAYAEFKRWDLGDIVGAEGTLMK 143
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+KV+ L+L+TKSLRPLP+KF +++QE KYR RY+DLI +E R F R++
Sbjct: 144 TKTGELSVKVTKLRLLTKSLRPLPDKFHGMADQEQKYRQRYVDLITDETARVRFTARSKA 203
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+S++R FM + F+EVETP+LH PGGA AKPF THHN+L+ +MFLRIAPELYLKRLI+G
Sbjct: 204 VSALREFMVGHGFLEVETPMLHPIPGGANAKPFKTHHNALDQEMFLRIAPELYLKRLIVG 263
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+++RNEGIS RHNPEFTM+EFYAAY NY LM FTE +I+ I +GT +
Sbjct: 264 GFERVFEINRSYRNEGISVRHNPEFTMMEFYAAYWNYRDLMDFTETLIRTIADKAVGTQQ 323
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQG+ +D ++ FE+LTI EAI KYT +D + +L + L+KI +K L+
Sbjct: 324 LTYQGKPVDLTQPFERLTIREAILKYTEAGTGVD--DSAWLINALRKIGLS-EEKDKLSQ 380
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQ+M FEET E KLW PT+I +PTEISPLAR +N E +TERFEL+I G E
Sbjct: 381 RSLASLQVMYFEETVEEKLWQPTFIMEHPTEISPLAR-ANDERPEVTERFELYITGREFG 439
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP GCGIG+DRL+
Sbjct: 440 NGFSELNDAEDQAARFNAQVAAKDSGDDE-AMFYDHDFVRALEYGMPPTGGCGIGIDRLM 498
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S +IRDVILFP LR E+
Sbjct: 499 MLLTDSPSIRDVILFPALRRES 520
>gi|381401876|ref|ZP_09926767.1| lysyl-tRNA synthetase [Kingella kingae PYKK081]
gi|380833173|gb|EIC13050.1| lysyl-tRNA synthetase [Kingella kingae PYKK081]
Length = 504
Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust.
Identities = 239/441 (54%), Positives = 331/441 (75%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR MGK SF +QD SG +IQLY++N+ + +++ F ++D+GDI+GA GTLFK
Sbjct: 76 MLKRQMGKASFATIQDVSG-----QIQLYLNNKGVSQDILDAFNHWDMGDIVGAVGTLFK 130
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GEL+++VS ++L+TKSLRPLP+KF LS+QE KYR RY+DLI N ++R F KR+QI
Sbjct: 131 TNHGELTVRVSEIRLLTKSLRPLPSKFHGLSDQETKYRQRYVDLIANPDSRDTFIKRSQI 190
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+ SIR+FM ++EVETP++H PGGA AKPF+THHN+L+M ++LRIAPELYLKRL++G
Sbjct: 191 VQSIRNFMVNEQYLEVETPMMHPIPGGATAKPFVTHHNALDMPLYLRIAPELYLKRLVVG 250
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN+NFRNEG+S RHNPEFTM+EFY A+ +Y +M+ TE +I+ GT K
Sbjct: 251 GLERVFEINRNFRNEGMSVRHNPEFTMMEFYEAFCDYERMMEMTEGVIRAASHAVNGTAK 310
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I Y G+ +D FE+LTI++AIKK+ PQY + L + +LK E+ K L +
Sbjct: 311 ITYNGKEVDLESPFERLTILQAIKKFNPQYTDEQLHDAEWLKKEIVKHGESLPHASGLGS 370
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE TE+KLWNPT+I +YP E+SPLAR S+ + +++TERFELF++G E+A
Sbjct: 371 -----LQLALFEGCTESKLWNPTFIIDYPVEVSPLARASDTK-SDLTERFELFVVGRELA 424
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RFK+Q+ K+ + E + ++D DYI A+E+G+PP GCGIG+DRL+
Sbjct: 425 NGYSELNDPEDQAARFKSQVAQKDAGDDE-AMHFDADYIRAMEFGLPPTGGCGIGIDRLV 483
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+++ IRDV+LFP +R E
Sbjct: 484 MLLTDAQTIRDVVLFPQMRPE 504
>gi|333376600|ref|ZP_08468372.1| lysine--tRNA ligase [Kingella kingae ATCC 23330]
gi|332967664|gb|EGK06775.1| lysine--tRNA ligase [Kingella kingae ATCC 23330]
Length = 504
Score = 520 bits (1339), Expect = e-145, Method: Compositional matrix adjust.
Identities = 239/441 (54%), Positives = 331/441 (75%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR MGK SF +QD SG +IQLY++N+ + +++ F ++D+GDI+GA GTLFK
Sbjct: 76 MLKRQMGKASFATIQDVSG-----QIQLYLNNKGVSQDILDAFNHWDMGDIVGAVGTLFK 130
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GEL+++VS ++L+TKSLRPLP+KF LS+QE KYR RY+DLI N ++R F KR+QI
Sbjct: 131 TNHGELTVRVSEIRLLTKSLRPLPSKFHGLSDQETKYRQRYVDLIANPDSRDTFIKRSQI 190
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+ SIR+FM ++EVETP++H PGGA AKPF+THHN+L+M ++LRIAPELYLKRL++G
Sbjct: 191 VQSIRNFMVNEQYLEVETPMMHPIPGGATAKPFVTHHNALDMPLYLRIAPELYLKRLVVG 250
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN+NFRNEG+S RHNPEFTM+EFY A+ +Y +M+ TE +I+ GT K
Sbjct: 251 GLERVFEINRNFRNEGMSVRHNPEFTMMEFYEAFCDYERMMEMTEGVIRAASHAVNGTAK 310
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I Y G+ +D FE+LTI++AIKK+ PQY + L + +LK E+ K L +
Sbjct: 311 ITYNGKEVDLESPFERLTILQAIKKFNPQYTDEQLHDAEWLKKEIVKHGESLPHASGLGS 370
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE TE+KLWNPT+I +YP E+SPLAR S+ + +++TERFELF++G E+A
Sbjct: 371 -----LQLALFEGCTESKLWNPTFIIDYPVEVSPLARASDTK-SDLTERFELFVVGRELA 424
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RFK+Q+ K+ + E + ++D DYI A+E+G+PP GCGIG+DRL+
Sbjct: 425 NGYSELNDPEDQAARFKSQVAQKDAGDDE-AMHFDADYIRAMEFGLPPTGGCGIGIDRLV 483
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+++ IRDV+LFP +R E
Sbjct: 484 MLLTDAQTIRDVVLFPQMRPE 504
>gi|319792237|ref|YP_004153877.1| lysyL-tRNA synthetase [Variovorax paradoxus EPS]
gi|315594700|gb|ADU35766.1| lysyl-tRNA synthetase [Variovorax paradoxus EPS]
Length = 520
Score = 520 bits (1339), Expect = e-145, Method: Compositional matrix adjust.
Identities = 249/441 (56%), Positives = 325/441 (73%), Gaps = 10/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF LQD + G+IQLY++ + +G+ Y +FK +D+GDI+GA+GTL K
Sbjct: 89 MLKRVMGKASFATLQD-----ATGRIQLYVTRDAVGEEAYAEFKRWDLGDILGAEGTLMK 143
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+KV+ L+L+TKSLRPLP F +++QE KYR RY+DLI +E R F R++
Sbjct: 144 TKTGELSVKVTKLRLLTKSLRPLPGDFYGMADQEQKYRQRYVDLITDEAARVRFTARSKA 203
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+S++R FM NDF+EVETP+LH PGGA AKPF THHN+L+ +MFLRIAPELYLKRLI+G
Sbjct: 204 VSALREFMVANDFLEVETPMLHPIPGGANAKPFKTHHNALDQEMFLRIAPELYLKRLIVG 263
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+++RNEGIS RHNPEFTM+EFYAAY NY LM FTE +I+ I +G+ +
Sbjct: 264 GFERVFEINRSYRNEGISVRHNPEFTMMEFYAAYWNYRDLMDFTETLIRTIADKAVGSQQ 323
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ Y G+ +D S+ FE+LTI EAI K+T + +D + +L + L+K+ +K L+
Sbjct: 324 LTYGGKPVDLSQPFERLTIREAILKHTDAGDGVD--DTAWLINGLRKLGLS-EEKDKLSQ 380
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQ+M FEET E KLW PT+I +PTEISPLAR +N E +TERFEL+I G E
Sbjct: 381 RSLASLQVMYFEETVEEKLWQPTFIMEHPTEISPLAR-ANDERPEVTERFELYITGREFG 439
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RF Q+ K+ + E + YYD D++ ALEYGMPP GCGIG+DRL+
Sbjct: 440 NGFSELNDAEDQAARFNAQVAAKDSGDDE-AMYYDHDFVRALEYGMPPTGGCGIGIDRLM 498
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S +IRDVILFP LR E
Sbjct: 499 MLLTDSPSIRDVILFPALRRE 519
>gi|332529458|ref|ZP_08405417.1| lysyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
gi|332041104|gb|EGI77471.1| lysyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
Length = 512
Score = 520 bits (1339), Expect = e-145, Method: Compositional matrix adjust.
Identities = 241/442 (54%), Positives = 332/442 (75%), Gaps = 9/442 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF LQD + G+IQLY++ + +G+ +Y FK++D+GDI+ A+GT+FK
Sbjct: 80 MLKRVMGKASFATLQD-----ATGRIQLYVTRDAVGEEVYAAFKHWDLGDILAAEGTVFK 134
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELSI VS ++L+TKSLRP+P+KF +++QE+KYR RY+DLI +E RK F R++
Sbjct: 135 TKTGELSINVSQIRLLTKSLRPMPDKFHGMADQEMKYRQRYVDLITDEEARKRFAARSKA 194
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+SSIR +M +N F+EVETP+LH PGGA AKPF+THHN+L+ +MFLRIAPELYLKRLI+G
Sbjct: 195 VSSIRDYMVQNGFLEVETPMLHPIPGGANAKPFVTHHNALDQEMFLRIAPELYLKRLIVG 254
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN++FRNEGIS RHNPEFTM+EFYAAY +Y LM +TE +I+ + +G+ +
Sbjct: 255 GFERVFEINRSFRNEGISVRHNPEFTMMEFYAAYWDYQDLMTYTESLIRHVAQKAVGSLQ 314
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ Y G+ +D S+ FE+LTI EAI K++ + + + +L + L K+ + K L++
Sbjct: 315 LTYGGKPVDLSQPFERLTIREAIVKHS-EAGSAHVDDAAWLINALSKLGLSEAKDK-LSS 372
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQ++ FEE E KLW PT++ +P EISPLAR S+ ++ +TERFEL+I G E
Sbjct: 373 KSLAGLQVLYFEEVVEEKLWQPTFVMEHPVEISPLARASD-KHPEVTERFELYITGREFG 431
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND EEQ+ RF++Q++ K+ + E + YYD DY+ ALEYGMPP GCG+G+DRL+
Sbjct: 432 NGFSELNDAEEQARRFQSQVEAKDSGDDE-AMYYDHDYVRALEYGMPPTGGCGVGLDRLM 490
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S +IRDVILFP LR E+
Sbjct: 491 MLLTDSPSIRDVILFPALRRES 512
>gi|329118329|ref|ZP_08247038.1| lysine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
gi|327465553|gb|EGF11829.1| lysine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
Length = 580
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 236/441 (53%), Positives = 330/441 (74%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR MGK SF +QD SG +IQLYI+N+ +G+ + DFK++D+GDI+GA+GTLFK
Sbjct: 152 MLKRAMGKASFATVQDVSG-----QIQLYINNQGVGEAAHEDFKHWDMGDIVGAEGTLFK 206
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GEL+++VS+++L++KSLRPLP+K + L++QE+KYR RY+DLI++ +R F KR++I
Sbjct: 207 TNHGELTVRVSNIRLLSKSLRPLPDKHKGLADQEVKYRQRYVDLIVSPESRDTFIKRSKI 266
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I ++R++M ++EVETP++H PGGA AKPF+THHN+L+M ++LRIAPELYLKRLI+G
Sbjct: 267 IQTVRNYMVGERYLEVETPMMHPIPGGASAKPFVTHHNALDMPLYLRIAPELYLKRLIVG 326
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN++FRNEG+S RHNPEFTM+EFY A+ Y +M+ TE +I+ GT K
Sbjct: 327 GLERVFEINRSFRNEGMSTRHNPEFTMMEFYEAFCTYERMMQMTEGVIRACAQAVCGTAK 386
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I Y G+ +D FE+LTI+EAIKKY P Y + L ++ +LK E+ ++ + +
Sbjct: 387 ISYNGKEVDLESPFERLTILEAIKKYNPHYTDEQLSDEAWLKKEIVRLGESLPPAPGIGS 446
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E KLWNPT+I +YP E+SPLAR S+ + +T+RFELF++G E+A
Sbjct: 447 -----LQLALFEGCAEGKLWNPTFIIDYPVEVSPLARASDTK-PGLTDRFELFVVGRELA 500
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+QS RFK Q+ K+ + E + +YD DYI A+EYG+PP G GIG+DRL+
Sbjct: 501 NGYSELNDPEDQSARFKAQVAQKDAGDDE-AMHYDADYIRAMEYGLPPTGGSGIGLDRLV 559
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT++ +IRDVILFP +R E
Sbjct: 560 MLLTDAPSIRDVILFPQMRPE 580
>gi|260220768|emb|CBA28663.1| Lysyl-tRNA synthetase [Curvibacter putative symbiont of Hydra
magnipapillata]
Length = 592
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 245/444 (55%), Positives = 327/444 (73%), Gaps = 11/444 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF LQD+S S G+IQLY+ E +G +LY FK++D+GDI+ A+GTLFK
Sbjct: 156 MLKRVMGKASFCTLQDSSFGPSGGRIQLYVRGEDVGVDLYAAFKHWDLGDIVAAEGTLFK 215
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELSI +S++L+TKSLRP+P+KF +++QE KYR RY+DL+ + +RK F R++
Sbjct: 216 TKTGELSIHATSIRLLTKSLRPMPDKFHGMADQETKYRQRYVDLMTDVESRKRFVARSKA 275
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+S++R FM ++F+EVETP+LH PGGA AKPF THHN+L+ +MFLRIAPELYLKRLI+G
Sbjct: 276 VSALREFMVSHNFLEVETPMLHPIPGGANAKPFKTHHNALDQEMFLRIAPELYLKRLIVG 335
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF+++FEIN+++RNEGIS RHNPEFTM+EFYAAY NY LM +TEK+I+ G +
Sbjct: 336 GFDRVFEINRSYRNEGISVRHNPEFTMMEFYAAYWNYQDLMDYTEKLIRDAARKATGGLQ 395
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ Y G+ +D + FE+LTI+EAI+KYT D + +F + L K + N
Sbjct: 396 LSYAGKPVDLEQPFERLTIVEAIQKYT------DAGDNVFDATWLTNAVKKLGLTEAKNR 449
Query: 301 LKK---DILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L+ LQ++ FEET E KLWNPT+I +PTEISPLAR +N + +TERFEL+I G
Sbjct: 450 LEGRSLASLQVLYFEETVEEKLWNPTFIMEHPTEISPLAR-ANDDRPEVTERFELYITGR 508
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
E NGFSELND E+Q+ RF+ Q+ K+ + E + ++D D++ ALEYGMPP GCGIG+D
Sbjct: 509 EFGNGFSELNDAEDQAARFQAQVAAKDSGDDE-AMHFDHDFVRALEYGMPPTGGCGIGID 567
Query: 418 RLIMLLTNSKNIRDVILFPHLRNE 441
RL+MLLT+S +IRDVILFP LR E
Sbjct: 568 RLMMLLTDSASIRDVILFPALRRE 591
>gi|40063229|gb|AAR38056.1| lysyl-tRNA synthetase [uncultured marine bacterium 577]
Length = 501
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 246/442 (55%), Positives = 336/442 (76%), Gaps = 12/442 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
+LKRVMGK SF +QD SG IQLYISN+I G++ + FK++D+GDI+G GTLF
Sbjct: 72 ILKRVMGKASFATIQDMSG-----HIQLYISNDITGESAHAAFKHFDLGDILGVHGTLFI 126
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T +GEL+I+V SL+L+TKSLRPLP KF L++QE KYR RY+DLI NE+TRKVF R++I
Sbjct: 127 TKSGELTIRVKSLRLLTKSLRPLPEKFHGLTDQEQKYRQRYLDLISNEDTRKVFLTRSRI 186
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I SIR F E+ ++EVETP++H PGGA A+PFITHHN+LNM +LRIAPELYLKRL++
Sbjct: 187 IQSIRTFFEERGYLEVETPMMHPIPGGAAARPFITHHNALNMDFYLRIAPELYLKRLVVS 246
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G K+FEIN++FRNEGIS RHNPEFTM+EFY AY ++I+LM TE +I+++ + +GTT+
Sbjct: 247 GMEKVFEINRSFRNEGISTRHNPEFTMLEFYEAYQDHIYLMNLTETLIRELAIKVLGTTE 306
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQG ++ S F +L+I +AI+K+ P++ + L ++ +L +L+ +N + + +
Sbjct: 307 ISYQGYKINLSNPFLRLSITQAIQKFHPEHTDAQLNDRAYLIKKLEALNISYKPEDGIGK 366
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LF+ETTE L +PT+I +YP+E+SPLAR+ N +N +T+RFEL+I G E+A
Sbjct: 367 -----LQLSLFDETTEHLLMDPTFIVDYPSEVSPLARR-NDKNPGVTDRFELYITGREMA 420
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF+ Q+ K + E + +YD DYI ALE+G+PP +G GIG+DRLI
Sbjct: 421 NGFSELNDPEDQAARFQEQVRAKESGDKE-AMHYDGDYIRALEHGLPPTAGEGIGIDRLI 479
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S +IRDVILFPHLR E+
Sbjct: 480 MLLTDSPSIRDVILFPHLRRED 501
>gi|121609996|ref|YP_997803.1| lysyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
gi|121554636|gb|ABM58785.1| lysyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
Length = 527
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 239/441 (54%), Positives = 327/441 (74%), Gaps = 5/441 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF LQD S + G+IQLY++++ +G+ Y DFK++D+GDI+GA+GTL K
Sbjct: 91 MLKRVMGKASFATLQDGSLGATGGRIQLYVTSDAVGQARYADFKHWDLGDIVGAEGTLMK 150
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T T ELSIKV+ L+L+TKSLRPLP+KF L++QE KYR RY+DLI + R+ F R++
Sbjct: 151 TRTDELSIKVTRLRLLTKSLRPLPDKFHGLADQEQKYRQRYVDLITDAQARQRFVARSKA 210
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+S +R FM + F+EVETP+LH PGGA A+PF+THHN+L +M+LRIAPELYLKRLI+G
Sbjct: 211 VSDLREFMVGHGFLEVETPMLHPIPGGANARPFVTHHNALEQQMYLRIAPELYLKRLIVG 270
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+++RNEGIS RHNPEFT +EFYAAY NY+ +M FTE +I+ + + G+ +
Sbjct: 271 GFERVFEINRSYRNEGISVRHNPEFTTLEFYAAYWNYLDVMDFTETLIRAVALKATGSLQ 330
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQGR +D ++ F +L+I EAI ++T +D + +L S LKK+ + + L++
Sbjct: 331 MSYQGRAVDLAQPFARLSIREAIFQHTEAGAHVD--DAAWLISALKKLG-RTQEADKLSS 387
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL+ FEET E KLW PT+I +PTEISPLAR +++ +TERFEL+I G E
Sbjct: 388 RTLVSLQLLYFEETVEDKLWQPTFIMEHPTEISPLARANDL-RPEVTERFELYITGREFG 446
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND +EQ+ RF Q+ K+ + E + ++D D++ ALEYGMPP GCGIG+DRL+
Sbjct: 447 NGFSELNDAQEQAARFHTQVAAKDGGDDE-AMFHDHDFVRALEYGMPPTGGCGIGIDRLM 505
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S +IRDVILFP LR +
Sbjct: 506 MLLTDSPSIRDVILFPALRRQ 526
>gi|451812113|ref|YP_007448567.1| class II lysyl-tRNA synthetase [Candidatus Kinetoplastibacterium
galatii TCC219]
gi|451778015|gb|AGF48963.1| class II lysyl-tRNA synthetase [Candidatus Kinetoplastibacterium
galatii TCC219]
Length = 509
Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust.
Identities = 257/442 (58%), Positives = 332/442 (75%), Gaps = 12/442 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR+MGK SF +QD S G+IQ+YIS + + +Y +FK +D+GDI+ +G +FK
Sbjct: 74 MLKRIMGKASFSTIQD-----STGRIQIYISQKNVNDEIYNNFKQFDLGDILLIEGKVFK 128
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELSI V + +I+K++RPLP KF +S+ IKYR RY+DLI+ E+T+K F+ R++I
Sbjct: 129 TNKGELSINVKLISIISKAIRPLPEKFHGISDPNIKYRQRYVDLIVTEDTKKTFELRSKI 188
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I++IR M K F+EVETP+LH PGGA AKPF THHNSLNM M+LRIAPELYLKRLI+G
Sbjct: 189 ITNIRQHMSKEGFIEVETPMLHTIPGGASAKPFTTHHNSLNMDMYLRIAPELYLKRLIVG 248
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF+K+FE+N+NFRNEGISPRHNPEFTM+EFYA YT+Y W+M FTEK+I +I M
Sbjct: 249 GFDKVFELNRNFRNEGISPRHNPEFTMMEFYATYTDYNWMMNFTEKLICEISMAINKKNY 308
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
++YQ + ++ SK FE+L I +AI KY +YN L + FL+ E++ I+ K +Q L +
Sbjct: 309 LNYQDKTINISKPFERLNICDAICKYNKKYNIEQLNDYEFLQKEIEHIDKKISQ-DFLKS 367
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
K LQL LFE+TTE K+W+PTYI +YP E SPLAR+S+I N ITERFELFI G EIA
Sbjct: 368 SKLGELQLCLFEKTTEEKIWDPTYIIDYPVETSPLARQSDI-NKKITERFELFIAGKEIA 426
Query: 361 NGFSELNDPEEQSVRFKNQIDLKN---EINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
NGFSELNDPEEQ+ R Q + KN E N ++ ++D+DYI ALEYGMPP GCGIG+D
Sbjct: 427 NGFSELNDPEEQARRLLEQAENKNNDSEDNHKM--FFDSDYITALEYGMPPTGGCGIGID 484
Query: 418 RLIMLLTNSKNIRDVILFPHLR 439
RL+ML+T+ NI+DVILFPHLR
Sbjct: 485 RLVMLITDKSNIKDVILFPHLR 506
>gi|30250282|ref|NP_842352.1| lysyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718]
gi|39932150|sp|Q82SH1.1|SYK_NITEU RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|30181077|emb|CAD86267.1| lysS; putative lysyl-tRNA synthetase protein [Nitrosomonas europaea
ATCC 19718]
Length = 502
Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust.
Identities = 246/443 (55%), Positives = 326/443 (73%), Gaps = 14/443 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
+ KRVMGK SF +QD SG +IQLYISN+ G+ + F++YD+GDI+GA+G LFK
Sbjct: 73 LFKRVMGKASFATIQDMSG-----RIQLYISNDHTGETAHEAFRHYDLGDILGAEGVLFK 127
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T T ELS++V+ L L+TKSLRPLP KF L++QE KYR RY+DLI NE+TR+VF R++I
Sbjct: 128 TRTDELSLRVTQLHLLTKSLRPLPEKFHGLADQEQKYRRRYLDLITNEDTRRVFAIRSKI 187
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I +IR F+ D++EVETP++H+ PGGA A+PF+THHN+L+M ++LRIAPELYLKRL++G
Sbjct: 188 IQAIREFLVDRDYLEVETPMMHSIPGGATARPFVTHHNALDMSLYLRIAPELYLKRLVVG 247
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G K+FEIN+NFRNEGIS RHNPEFTM+EFY AY ++ +LM TE M++++ + GTT+
Sbjct: 248 GMEKVFEINRNFRNEGISTRHNPEFTMLEFYEAYQDHNYLMDLTESMLREVALKVSGTTR 307
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQ R +D ++ F +LTI +AI KY P+Y++ L ++ FL L+ N +
Sbjct: 308 IVYQQREMDLAQPFARLTIAQAILKYHPEYSDAQLNDRDFLTKALQAKGVTVNPDSGIGG 367
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LF+ETTE L+ P +I +YP E+SPLAR N N IT+RFEL+I G EIA
Sbjct: 368 -----LQLALFDETTEHLLFEPVFIVDYPAEVSPLAR-CNDANPEITDRFELYIAGREIA 421
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSS-YYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELNDPE+Q+ RF Q K G+L + +YD DYI ALEYG+PP +G GIG+DRL
Sbjct: 422 NGFSELNDPEDQANRFLEQARAKEA--GDLEAMHYDADYIQALEYGLPPTAGEGIGIDRL 479
Query: 420 IMLLTNSKNIRDVILFPHLRNEN 442
+MLLT+S +IRDVILFP LR E+
Sbjct: 480 VMLLTDSPSIRDVILFPQLRKED 502
>gi|378823461|ref|ZP_09846092.1| lysine--tRNA ligase [Sutterella parvirubra YIT 11816]
gi|378597716|gb|EHY30973.1| lysine--tRNA ligase [Sutterella parvirubra YIT 11816]
Length = 508
Score = 516 bits (1330), Expect = e-144, Method: Compositional matrix adjust.
Identities = 236/441 (53%), Positives = 329/441 (74%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMG+ SF ++D +G ++Q +I E +G+ Y FK +D+GDI+ KGTLF+
Sbjct: 77 MLKRVMGRASFATVRDFTG-----EMQYFIEREAVGEESYAAFKQFDLGDIVAVKGTLFR 131
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS++ ++L+TK++RPLP+K + L + E+ YR RY+DLI+NE +R F R++
Sbjct: 132 TKTGELSVRAHEVRLMTKNIRPLPDKHKGLVDTEMCYRQRYVDLIMNEESRSRFLVRSKA 191
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I++IR FM +N F+EVETP+LH PGGA AKPF+THHN+L++ M+LRIAPELYLKRL++G
Sbjct: 192 IAAIRAFMLQNRFLEVETPMLHPIPGGANAKPFVTHHNALDIDMYLRIAPELYLKRLVVG 251
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+S RHNPEFTM+EFYA Y Y+ M +TE +++ + ++ G+
Sbjct: 252 GFERVFEINRNFRNEGVSVRHNPEFTMMEFYATYWTYVDQMDYTEALLRHVAIEATGSAV 311
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQG +D SK F+++T +EAI ++ PQY DL+N+ FL+SEL ++ L
Sbjct: 312 LQYQGHTIDLSKPFKRVTPVEAILEHAPQYTMGDLENEEFLRSELTRLGAPQPDYVGLG- 370
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQ+ LFEET E+KL PT+I N+PTEISPLAR S+ EN++I+ERFEL+I G E A
Sbjct: 371 ----ALQMALFEETAESKLIEPTFIINFPTEISPLARASD-ENHDISERFELYIAGRETA 425
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDP++Q+ RF+ Q++ K+ + E + YYD DYI ALEYG+PP GCGIG+DR I
Sbjct: 426 NGFSELNDPDDQAARFRAQVEAKSHGDDE-AMYYDADYIRALEYGLPPTGGCGIGIDRFI 484
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT++ +IRDV+LFPH+R E
Sbjct: 485 MLLTDAASIRDVLLFPHMRPE 505
>gi|394987704|ref|ZP_10380543.1| lysyl-tRNA synthetase, class-2 [Sulfuricella denitrificans skB26]
gi|393792923|dbj|GAB70182.1| lysyl-tRNA synthetase, class-2 [Sulfuricella denitrificans skB26]
Length = 502
Score = 516 bits (1330), Expect = e-144, Method: Compositional matrix adjust.
Identities = 249/443 (56%), Positives = 326/443 (73%), Gaps = 13/443 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ YI++E + + FK++D+GDII AKGTLFK
Sbjct: 72 MLKRVMGKASFATVQDMSG-----RIQFYINDEGVSAETHEAFKHWDMGDIIAAKGTLFK 126
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++V L+L+TKSLRPLP KF L++QE KYR RY+D+I NE TRK F RT+I
Sbjct: 127 TNKGELSVRVYELRLLTKSLRPLPEKFHGLTDQEAKYRQRYLDMITNEETRKTFIVRTRI 186
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I SIR F+ ++EVETP++H PGGA AKPF THHN+L+M++FLRIAPELYLKRL++G
Sbjct: 187 IQSIRTFLVDRGYLEVETPMMHPIPGGASAKPFTTHHNALDMELFLRIAPELYLKRLVVG 246
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF K+FEIN+NFRNEG+S RHNPEFTMIEFY AY +Y ++M TE+M ++ +G
Sbjct: 247 GFEKVFEINRNFRNEGLSTRHNPEFTMIEFYEAYRDYRYMMDLTEEMFRETAKAVLGHAV 306
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTP-QYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ YQG ++ ++ F++LTI E+I KY P ++++ L ++ FLK++L+K+ + +
Sbjct: 307 VQYQGHTINLAQPFDRLTITESIHKYHPGRFSDEQLNDRAFLKAQLEKMGADHHPTDGVG 366
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
LQL LFEETTE L PT+I +YP E+SPLAR SN ITERFELFI+G EI
Sbjct: 367 G-----LQLSLFEETTEQMLIQPTFIIDYPAEVSPLAR-SNDAAPGITERFELFIVGREI 420
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
ANGFSELNDPE+Q+ RF Q+ K + E + +YD DYI ALEYG+PP +G GIG+DRL
Sbjct: 421 ANGFSELNDPEDQAERFMAQVRQKEAGDAE-AMHYDADYIRALEYGLPPTAGEGIGIDRL 479
Query: 420 IMLLTNSKNIRDVILFPHLRNEN 442
+MLLT+S +IRDVILFP +R E+
Sbjct: 480 VMLLTDSPSIRDVILFPQMRKED 502
>gi|421561500|ref|ZP_16007344.1| lysine--tRNA ligase [Neisseria meningitidis NM2657]
gi|254669925|emb|CBA04495.1| lysyl-tRNA synthetase [Neisseria meningitidis alpha153]
gi|402337852|gb|EJU73094.1| lysine--tRNA ligase [Neisseria meningitidis NM2657]
Length = 503
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 239/441 (54%), Positives = 327/441 (74%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR MGK SF +QD SG +IQLY++N+ + + + DF ++D+GDI+GA+GTLFK
Sbjct: 75 MLKRQMGKASFATIQDVSG-----QIQLYLNNKGVSQEVLDDFNHWDLGDIVGAEGTLFK 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GEL+++VS ++L++KSLRPLP+K + LS+QE KYR RY+DLI NE +R F KR+QI
Sbjct: 130 TNHGELTVRVSDIRLLSKSLRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQI 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I S+R+FM ++EVETP++H PGGA AKPF+THHN+L++ ++LRIAPELYLKRL++G
Sbjct: 190 IQSVRNFMVGEHYLEVETPMMHPIPGGATAKPFVTHHNALDISLYLRIAPELYLKRLVVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN++FRNEG+S RHNPEFTMIEFY A+++Y +M+ E +I+ GT K
Sbjct: 250 GLERVFEINRSFRNEGMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTAK 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I Y G+ +D FE+LTI+EAIKKY P Y + L + +LK E+ K + +
Sbjct: 310 ISYNGKEVDLESPFERLTILEAIKKYNPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGS 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E KLWNPT+I +YP E+SPLAR S+ + +TERFELF++G E+A
Sbjct: 370 -----LQLALFEGCAEGKLWNPTFIVDYPVEVSPLARASDTK-QGLTERFELFVVGRELA 423
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RFK+Q+ K+ + E + +YD DYI A+E+G+PP GCGIG+DRL+
Sbjct: 424 NGYSELNDPEDQAERFKSQVAQKDAGDDE-AMHYDADYIRAMEFGLPPTGGCGIGIDRLV 482
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S+ IRDVILFP +R E
Sbjct: 483 MLLTDSQTIRDVILFPQMRPE 503
>gi|160900680|ref|YP_001566262.1| lysyl-tRNA synthetase [Delftia acidovorans SPH-1]
gi|160366264|gb|ABX37877.1| lysyl-tRNA synthetase [Delftia acidovorans SPH-1]
Length = 519
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 239/442 (54%), Positives = 328/442 (74%), Gaps = 5/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD S ++G+IQLYI+ + +G+ +Y FK +D+GDI+GA+GTL K
Sbjct: 83 MLKRVMGKASFATIQDGSLGPTHGRIQLYITRDTVGEEVYAAFKRWDLGDILGAEGTLMK 142
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+KV +L+L+TKSLRP+P+KF +++ E K R RY+DL+++E R+ F R++
Sbjct: 143 TKTGELSVKVQTLRLLTKSLRPMPDKFHGMADLEQKVRQRYVDLMMDEQARRRFIARSKA 202
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+S IR FM ++ F+EVETP+LH PGGA AKPF+THHN+L+ +M+LRIAPELYLKRL++G
Sbjct: 203 VSGIREFMVEHGFLEVETPMLHPIPGGANAKPFVTHHNALDQEMYLRIAPELYLKRLVVG 262
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEGIS RHNPEFTM+EFYAAY NY LM +TE +++ +GT +
Sbjct: 263 GFERVFEINRNFRNEGISVRHNPEFTMMEFYAAYWNYRDLMDYTEALVRDAAQKAVGTLQ 322
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ Y G+ +D S+ F++LTI EAI K+T +++ ++ +L + L+K+ +K L+
Sbjct: 323 LTYGGKPVDLSQPFQRLTIPEAIVKFTEAGDKV--ADREWLTNALRKLG-MTEEKDRLST 379
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQ++ FEE E KLW PT+I +PTEISPLAR +N E +TERFEL+I G E
Sbjct: 380 RTLASLQVLYFEEVVEEKLWQPTFIMEHPTEISPLAR-ANDERPEVTERFELYITGREFG 438
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RF Q+ K+ + E + Y+D D++ ALEYGMPP GCGIG+DRL+
Sbjct: 439 NGFSELNDAEDQAARFNAQVQAKDGGDDE-AMYFDHDFVRALEYGMPPTGGCGIGIDRLM 497
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S +IRDVILFP LR E
Sbjct: 498 MLLTDSASIRDVILFPALRREQ 519
>gi|333913022|ref|YP_004486754.1| Lysyl-tRNA synthetase [Delftia sp. Cs1-4]
gi|333743222|gb|AEF88399.1| Lysyl-tRNA synthetase [Delftia sp. Cs1-4]
Length = 519
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 239/442 (54%), Positives = 328/442 (74%), Gaps = 5/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD S ++G+IQLYI+ + +G+ +Y FK +D+GDI+GA+GTL K
Sbjct: 83 MLKRVMGKASFATIQDGSLGPTHGRIQLYITRDTVGEEVYAAFKRWDLGDILGAEGTLMK 142
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+KV +L+L+TKSLRP+P+KF +++ E K R RY+DL+++E R+ F R++
Sbjct: 143 TKTGELSVKVQTLRLLTKSLRPMPDKFHGMADLEQKVRQRYVDLMMDEQARRRFIARSKA 202
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+S IR FM ++ F+EVETP+LH PGGA AKPF+THHN+L+ +M+LRIAPELYLKRL++G
Sbjct: 203 VSGIREFMVEHGFLEVETPMLHPIPGGANAKPFVTHHNALDQEMYLRIAPELYLKRLVVG 262
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEGIS RHNPEFTM+EFYAAY NY LM +TE +++ +GT +
Sbjct: 263 GFERVFEINRNFRNEGISVRHNPEFTMMEFYAAYWNYRDLMDYTEALVRDAAQKAVGTLQ 322
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ Y G+ +D S+ F++LTI EAI K+T +++ ++ +L + L+K+ +K L+
Sbjct: 323 LTYGGKPVDLSQPFQRLTIPEAIVKFTEAGDKV--ADREWLTNALRKLG-MTEEKDRLSA 379
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQ++ FEE E KLW PT+I +PTEISPLAR +N E +TERFEL+I G E
Sbjct: 380 RTLASLQVLYFEEVVEEKLWQPTFIMEHPTEISPLAR-ANDERPEVTERFELYITGREFG 438
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RF Q+ K+ + E + Y+D D++ ALEYGMPP GCGIG+DRL+
Sbjct: 439 NGFSELNDAEDQAARFNAQVQAKDGGDDE-AMYFDHDFVRALEYGMPPTGGCGIGIDRLM 497
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S +IRDVILFP LR E
Sbjct: 498 MLLTDSASIRDVILFPALRREQ 519
>gi|421567846|ref|ZP_16013579.1| lysine--tRNA ligase [Neisseria meningitidis NM3001]
gi|402343281|gb|EJU78432.1| lysine--tRNA ligase [Neisseria meningitidis NM3001]
Length = 503
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 238/441 (53%), Positives = 327/441 (74%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR MGK SF +QD SG +IQLY++N+ + + + DF ++D+GDI+GA+GTLFK
Sbjct: 75 MLKRQMGKASFATIQDVSG-----QIQLYLNNKGVSQEVLDDFNHWDLGDIVGAEGTLFK 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GEL+++VS ++L++KSLRPLP+K + LS+QE KYR RY+DLI+NE +R F KR+QI
Sbjct: 130 TNHGELTVRVSGIRLLSKSLRPLPDKHKGLSDQETKYRQRYVDLIVNEESRNTFIKRSQI 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I S+R+FM ++EVETP++H PGGA AKPF+THHN+L++ ++LRIAPELYLKRL++G
Sbjct: 190 IQSVRNFMVGEHYLEVETPMMHPIPGGATAKPFVTHHNALDIPLYLRIAPELYLKRLVVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN++FRNEG+S RHNPEFTMIEFY A+++Y +M+ E +I+ GT
Sbjct: 250 GLERVFEINRSFRNEGMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTAN 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I Y G+ +D FE+LTI+EAIKKY P Y + L + +LK E+ K ++ +
Sbjct: 310 ITYNGKEVDLESPFERLTILEAIKKYNPHYTDEQLNDAEWLKKEIVKHGESLPPSLVIGS 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E KLWNPT+I +YP E+SPLAR S+ + +TERFELF++G E+A
Sbjct: 370 -----LQLALFEGCAEGKLWNPTFIVDYPVEVSPLARASDTK-QGLTERFELFVVGRELA 423
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RFK Q+ K+ + E + +YD DYI A+E+G+PP GCGIG+DRL+
Sbjct: 424 NGYSELNDPEDQAERFKAQVAQKDAGDDE-AMHYDADYIRAMEFGLPPTGGCGIGIDRLV 482
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S+ IRDVILFP +R E
Sbjct: 483 MLLTDSQTIRDVILFPQMRPE 503
>gi|421563622|ref|ZP_16009439.1| lysine--tRNA ligase [Neisseria meningitidis NM2795]
gi|421565720|ref|ZP_16011490.1| lysine--tRNA ligase [Neisseria meningitidis NM3081]
gi|421907140|ref|ZP_16337027.1| lysyl-tRNA synthetase [Neisseria meningitidis alpha704]
gi|393291754|emb|CCI73012.1| lysyl-tRNA synthetase [Neisseria meningitidis alpha704]
gi|402340647|gb|EJU75846.1| lysine--tRNA ligase [Neisseria meningitidis NM2795]
gi|402343297|gb|EJU78446.1| lysine--tRNA ligase [Neisseria meningitidis NM3081]
Length = 503
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 239/441 (54%), Positives = 326/441 (73%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR MGK SF +QD SG +IQLY++N+ + + + DF ++D+GDI+GA+GTLFK
Sbjct: 75 MLKRQMGKASFATIQDVSG-----QIQLYLNNKGVSQEVLDDFNHWDLGDIVGAEGTLFK 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GEL+++VS ++L++KSLRPLP+K + LS+QE KYR RY+DLI NE +R F KR+QI
Sbjct: 130 TNHGELTVRVSDIRLLSKSLRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQI 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I S+R+FM ++EVETP++H PGGA AKPF+THHN+L++ ++LRIAPELYLKRL++G
Sbjct: 190 IQSVRNFMVGEHYLEVETPMMHPIPGGATAKPFVTHHNALDIPLYLRIAPELYLKRLVVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN++FRNEG+S RHNPEFTMIEFY A+++Y +M+ E +I+ GT K
Sbjct: 250 GLERVFEINRSFRNEGMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTAK 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I Y G+ +D FE+LTI+EAIKKY P Y + L + +LK E+ K + +
Sbjct: 310 ISYNGKEVDLESPFERLTILEAIKKYNPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGS 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E KLWNPT+I +YP E+SPLAR S+ + +TERFELF++G E+A
Sbjct: 370 -----LQLALFEGCAEGKLWNPTFIVDYPVEVSPLARASDTK-QGLTERFELFVVGRELA 423
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RFK Q+ K+ + E + +YD DYI A+E+G+PP GCGIG+DRL+
Sbjct: 424 NGYSELNDPEDQAERFKAQVAQKDAGDDE-AMHYDADYIRAMEFGLPPTGGCGIGIDRLV 482
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S+ IRDVILFP +R E
Sbjct: 483 MLLTDSQTIRDVILFPQMRPE 503
>gi|385855472|ref|YP_005901985.1| lysyl-tRNA synthetase [Neisseria meningitidis M01-240355]
gi|416213041|ref|ZP_11622087.1| lysyl-tRNA synthetase [Neisseria meningitidis M01-240013]
gi|325144654|gb|EGC66952.1| lysyl-tRNA synthetase [Neisseria meningitidis M01-240013]
gi|325204413|gb|ADY99866.1| lysyl-tRNA synthetase [Neisseria meningitidis M01-240355]
Length = 503
Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust.
Identities = 239/441 (54%), Positives = 326/441 (73%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR MGK SF +QD SG +IQLY++N+ + + + DF ++D+GDI+GA+GTLFK
Sbjct: 75 MLKRQMGKASFATIQDVSG-----QIQLYLNNKGVSQEILDDFNHWDLGDIVGAEGTLFK 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GEL+++VS ++L++KSLRPLP+K + LS+QE KYR RY+DLI NE +R F KR+QI
Sbjct: 130 TNHGELTVRVSDIRLLSKSLRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQI 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I S+R+FM ++EVETP++H PGGA AKPF+THHN+L++ ++LRIAPELYLKRL++G
Sbjct: 190 IQSVRNFMVNERYLEVETPMMHPIPGGATAKPFVTHHNALDIPLYLRIAPELYLKRLVVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN++FRNEG+S RHNPEFTMIEFY A+++Y +M+ E +I+ GT K
Sbjct: 250 GLERVFEINRSFRNEGMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTAK 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I Y G+ +D FE+LTI+EAIKKY P Y + L + +LK E+ K + +
Sbjct: 310 ISYNGKEVDLESPFERLTILEAIKKYNPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGS 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E KLWNPT+I +YP E+SPLAR S+ + +TERFELF++G E+A
Sbjct: 370 -----LQLALFEGCAEGKLWNPTFIVDYPVEVSPLARASDTK-QGLTERFELFVVGRELA 423
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RFK Q+ K+ + E + +YD DYI A+E+G+PP GCGIG+DRL+
Sbjct: 424 NGYSELNDPEDQAERFKAQVAQKDAGDDE-AMHYDADYIRAMEFGLPPTGGCGIGIDRLV 482
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S+ IRDVILFP +R E
Sbjct: 483 MLLTDSQTIRDVILFPQMRPE 503
>gi|429743154|ref|ZP_19276741.1| lysine--tRNA ligase [Neisseria sp. oral taxon 020 str. F0370]
gi|429166515|gb|EKY08489.1| lysine--tRNA ligase [Neisseria sp. oral taxon 020 str. F0370]
Length = 503
Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust.
Identities = 235/441 (53%), Positives = 328/441 (74%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR MGK SF +QD +G +IQLYI+N+ +G+ + DFK++D+GDI+GA+GTLFK
Sbjct: 75 MLKRAMGKASFATVQDATG-----QIQLYINNQGVGEAAHEDFKHWDMGDIVGAEGTLFK 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GEL+++VS+++L++KSLRPLP+K + L++QE KYR RY+DLI+N +R F KR++I
Sbjct: 130 TNHGELTVRVSNVRLLSKSLRPLPDKHKGLADQEAKYRQRYVDLIVNPESRDTFIKRSRI 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I ++R++M ++EVETP++H PGGA AKPF+THHN+L+M ++LRIAPELYLKRL++G
Sbjct: 190 IQTVRNYMVNERYLEVETPMMHPIPGGATAKPFVTHHNALDMPLYLRIAPELYLKRLVVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN++FRNEG+S RHNPEFTM+EFY A+ Y +M+ TE +I+ GT K
Sbjct: 250 GLERVFEINRSFRNEGMSTRHNPEFTMMEFYEAFCTYERMMEMTEGVIRACAQAVCGTAK 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I Y G+ +D FE+LTI+EAIKKY P Y + L + +LK E+ + + +
Sbjct: 310 ISYNGKEVDLESPFERLTILEAIKKYNPHYTDEQLFDAEWLKKEIVRHGESLPPAPGIGS 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E KLWNPT+I +YP E+SPLAR S+ + +T+RFELF++G E+A
Sbjct: 370 -----LQLALFEGCAEGKLWNPTFIIDYPVEVSPLARASDTK-PGLTDRFELFVVGRELA 423
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+QS RFK Q+ K+ + E + +YD DYI A+EYG+PP G GIG+DRL+
Sbjct: 424 NGYSELNDPEDQSARFKAQVAQKDAGDDE-AMHYDADYIRAMEYGLPPTGGSGIGLDRLV 482
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT++++IRDVILFP +R E
Sbjct: 483 MLLTDAQSIRDVILFPQMRPE 503
>gi|421538362|ref|ZP_15984539.1| lysine--tRNA ligase [Neisseria meningitidis 93003]
gi|402317181|gb|EJU52720.1| lysine--tRNA ligase [Neisseria meningitidis 93003]
Length = 503
Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust.
Identities = 238/441 (53%), Positives = 327/441 (74%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR MGK SF +QD SG +IQLY++N+ + + + DF ++D+GDI+GA+GTLFK
Sbjct: 75 MLKRQMGKASFATIQDVSG-----QIQLYLNNKGVSQEVLDDFNHWDLGDIVGAEGTLFK 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GEL+++VS ++L++KSLRPLP+K + LS+QE KYR RY+DLI NE +R F KR+QI
Sbjct: 130 TNHGELTVRVSDIRLLSKSLRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQI 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I S+R+FM ++EVETP++H PGGA AKPF+THHN+L++ ++LRIAPELYLKRL++G
Sbjct: 190 IQSVRNFMVGEHYLEVETPMMHPIPGGATAKPFVTHHNALDIPLYLRIAPELYLKRLVVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN++FRNEG+S RHNPEFTMIEFY A+++Y +M+ E +I+ GT
Sbjct: 250 GLERVFEINRSFRNEGMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTAN 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I Y G+ +D FE+LTI+EAIKKY P Y + L + +LK E+ K + +
Sbjct: 310 ITYNGKEVDLESPFERLTILEAIKKYNPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGS 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E+KLWNPT+I +YP E+SPLAR S+ + +TERFELF++G E+A
Sbjct: 370 -----LQLALFEGCAESKLWNPTFIVDYPVEVSPLARASDTK-QGLTERFELFVVGRELA 423
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RFK+Q+ K+ + E + +YD DYI A+E+G+PP GCGIG+DRL+
Sbjct: 424 NGYSELNDPEDQAERFKSQVAQKDAGDDE-AMHYDADYIRAMEFGLPPTGGCGIGIDRLV 482
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S+ IRDVILFP +R E
Sbjct: 483 MLLTDSQTIRDVILFPQMRPE 503
>gi|221068672|ref|ZP_03544777.1| lysyl-tRNA synthetase [Comamonas testosteroni KF-1]
gi|220713695|gb|EED69063.1| lysyl-tRNA synthetase [Comamonas testosteroni KF-1]
Length = 514
Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust.
Identities = 243/442 (54%), Positives = 325/442 (73%), Gaps = 10/442 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD +G +IQ Y++ + +G+ +Y DFK +D+GDII +G L K
Sbjct: 83 MLKRVMGKASFATVQDATG-----RIQAYVTRDAVGEEVYADFKKWDLGDIIAVEGQLMK 137
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELSIK + ++L+TKSLRP+P+KF +++ E K R RY+DL+ +E RK F R++
Sbjct: 138 TKTGELSIKAAKIRLLTKSLRPMPDKFHGMADLEQKVRQRYVDLMTDEEARKRFVARSKA 197
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
++ IR FM ++ F+EVETP+LH PGGA AKPFITHHN+L+ +M+LRIAPELYLKRLI+G
Sbjct: 198 VAGIRDFMVEHGFLEVETPMLHPIPGGANAKPFITHHNALDQEMYLRIAPELYLKRLIVG 257
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEGIS RHNPEFTM+EFYAAY NY LM +TEK+I+ + +GT +
Sbjct: 258 GFERVFEINRNFRNEGISVRHNPEFTMMEFYAAYWNYQDLMDYTEKLIRDAAIKAVGTLE 317
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ Y G+ +D +K FE+LTI EAI KYT + + N+ +L + LKK+ K ++ K L+
Sbjct: 318 LSYGGKPVDLAKPFERLTIPEAIVKYTEAGDNV--ANREWLTNALKKLGMKEDKDK-LST 374
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQ++ FEE E KLWNPT+I +PTEISPLAR +N E +TERFEL+I G E
Sbjct: 375 RTLASLQVLYFEEVVEEKLWNPTFIMEHPTEISPLAR-ANDERPEVTERFELYITGREFG 433
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RF Q++ K+ + E + Y+D D++ ALEYGMPP GCGIG+DR +
Sbjct: 434 NGFSELNDAEDQAARFNAQVEAKDGGDDE-AMYFDHDFVRALEYGMPPTGGCGIGIDRFM 492
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S +IRDVILFP LR E
Sbjct: 493 MLLTDSASIRDVILFPALRREQ 514
>gi|264677131|ref|YP_003277037.1| lysyl-tRNA synthetase [Comamonas testosteroni CNB-2]
gi|262207643|gb|ACY31741.1| lysyl-tRNA synthetase [Comamonas testosteroni CNB-2]
Length = 514
Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust.
Identities = 244/441 (55%), Positives = 325/441 (73%), Gaps = 10/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD +G +IQ Y++ + +G+ +Y DFK +D+GDII +G L K
Sbjct: 83 MLKRVMGKASFATVQDATG-----RIQAYVTRDAVGEEVYADFKKWDLGDIISVEGQLMK 137
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELSIK + ++L+TKSLRP+P+KF +++ E K R RY+DL+ +E RK F R++
Sbjct: 138 TKTGELSIKATKIRLLTKSLRPMPDKFHGMADLEQKVRQRYVDLMTDEEARKRFVARSKA 197
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
++ IR FM ++ F+EVETP+LH PGGA AKPFITHHN+L+ +M+LRIAPELYLKRLI+G
Sbjct: 198 VAGIRDFMVEHGFLEVETPMLHPIPGGANAKPFITHHNALDQEMYLRIAPELYLKRLIVG 257
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEGIS RHNPEFTM+EFYAAY NY LM +TEK+I+ M +GT +
Sbjct: 258 GFERVFEINRNFRNEGISVRHNPEFTMMEFYAAYWNYQDLMDYTEKLIRDAAMKAVGTLE 317
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ Y G+ +D +K FE+LTI EAI KYT + + N+ +L + LKK+ K ++ K L+
Sbjct: 318 LSYGGKPVDLAKPFERLTIPEAIVKYTEAGDNVG--NREWLTNALKKLGMKEDKDK-LST 374
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQ++ FEE E KLWNPT+I +PTEISPLAR +N E +TERFEL+I G E
Sbjct: 375 RTLASLQVLYFEEVVEDKLWNPTFIMEHPTEISPLAR-ANDERPEVTERFELYITGREFG 433
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RF Q++ K+ + E + Y+D D++ ALEYGMPP GCGIG+DR +
Sbjct: 434 NGFSELNDAEDQAARFNAQVEAKDSGDDE-AMYFDHDFVRALEYGMPPTGGCGIGIDRFM 492
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S +IRDVILFP LR E
Sbjct: 493 MLLTDSASIRDVILFPALRRE 513
>gi|294671198|ref|ZP_06736052.1| hypothetical protein NEIELOOT_02906 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307136|gb|EFE48379.1| hypothetical protein NEIELOOT_02906 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 503
Score = 513 bits (1321), Expect = e-143, Method: Compositional matrix adjust.
Identities = 237/441 (53%), Positives = 328/441 (74%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR MGK SF +QD +G +IQLY++N+ + + + DF ++D+GDI+GA+GTLFK
Sbjct: 75 MLKRQMGKASFATIQDVTG-----QIQLYLNNKGVSQEVLDDFNHWDLGDIVGAEGTLFK 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GEL+++VS ++L++KSLRPLP+K + LS+QE KYR RY+DLI NE +R F KR+QI
Sbjct: 130 TNHGELTVRVSDIRLLSKSLRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQI 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I S+R+FM ++EVETP++H PGGA AKPF+THHN+L++ ++LRIAPELYLKRL++G
Sbjct: 190 IQSVRNFMVNEHYLEVETPMMHPIPGGATAKPFVTHHNALDIPLYLRIAPELYLKRLVVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN++FRNEG+S RHNPEFTMIEFY A+++Y +M+ E +I+ GT K
Sbjct: 250 GLERVFEINRSFRNEGMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTAK 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I Y G+ +D FE+LTI++AIKKY P Y + L + +LK E+ K + +
Sbjct: 310 ISYNGKEVDLESPFERLTILDAIKKYNPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGS 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E+KLWNPT+I +YP E+SPLAR S+ + +TERFELF++G E+A
Sbjct: 370 -----LQLALFEGCAESKLWNPTFIVDYPVEVSPLARASDTK-QGLTERFELFVVGRELA 423
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RFK+Q+ K+ + E + +YD DYI A+E+G+PP GCGIG+DRL+
Sbjct: 424 NGYSELNDPEDQAERFKSQVAQKDAGDDE-AMHYDADYIRAMEFGLPPTGGCGIGIDRLV 482
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S+ IRDVILFP +R E
Sbjct: 483 MLLTDSQTIRDVILFPQMRPE 503
>gi|337280484|ref|YP_004619956.1| lysyl-tRNA synthetase [Ramlibacter tataouinensis TTB310]
gi|334731561|gb|AEG93937.1| candidate lysyl-tRNA synthetase (Lysine--tRNA ligase) [Ramlibacter
tataouinensis TTB310]
Length = 509
Score = 513 bits (1321), Expect = e-143, Method: Compositional matrix adjust.
Identities = 235/441 (53%), Positives = 325/441 (73%), Gaps = 10/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF LQD +G ++Q+Y++ + +G+ +Y FK++D+GD++G +G +FK
Sbjct: 79 MLKRVMGKASFATLQDATG-----RLQVYVTRDGVGEEVYAAFKHWDLGDVVGCEGKVFK 133
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+ +S++L+TKSLRP+P+KF +++QE+KYR RY+DL+ +E+ R+ F R++
Sbjct: 134 TKTGELSVNATSIRLLTKSLRPMPDKFHGVADQEVKYRQRYVDLMTDEDARRRFVARSKA 193
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
++ IR FM ++ F+EVETP+LH PGGA A+PF+THHN+L+ +MFLRIAPELYLKRLI+G
Sbjct: 194 VAGIRDFMVQHGFLEVETPMLHPIPGGANARPFVTHHNALDQEMFLRIAPELYLKRLIVG 253
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEGIS RHNPEFTM+EFYAAY NY LM FTE +++ +GT +
Sbjct: 254 GFERVFEINRNFRNEGISVRHNPEFTMMEFYAAYWNYRDLMDFTEALVRDAAQKAVGTLQ 313
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ Y GR +D ++ F +LTI EAI +T + +D N+ +L L+K +K L
Sbjct: 314 LTYGGRPVDLAQPFARLTIREAIVAHTGAGDNVD--NRDWLTGALRKAGLT-EEKHGLAG 370
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQ++ FEET E KLW PT+I +PTEISPLAR +N + +TERFEL+I G E
Sbjct: 371 RSLASLQVLYFEETVEEKLWQPTFIMEHPTEISPLAR-ANDQRPEVTERFELYITGREFG 429
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND EEQ+ RF Q++ K+ + E + ++D D++ ALEYGMPP GCGIG+DRL+
Sbjct: 430 NGFSELNDAEEQTARFAAQVNAKDAGDDE-AMFFDHDFVRALEYGMPPTGGCGIGIDRLM 488
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S +IRDVILFP LR E
Sbjct: 489 MLLTDSPSIRDVILFPALRRE 509
>gi|404378760|ref|ZP_10983843.1| lysyl-tRNA synthetase [Simonsiella muelleri ATCC 29453]
gi|294483885|gb|EFG31569.1| lysyl-tRNA synthetase [Simonsiella muelleri ATCC 29453]
Length = 504
Score = 513 bits (1320), Expect = e-143, Method: Compositional matrix adjust.
Identities = 238/442 (53%), Positives = 329/442 (74%), Gaps = 13/442 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR MGK +F +QD SG IQLY++N+ + +++ DF ++D+GDIIGA GTLFK
Sbjct: 75 MLKRQMGKATFATVQDVSG-----SIQLYLNNKGVSQDILDDFNHWDMGDIIGATGTLFK 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GEL+++VS ++L++KSLRPLP+K + LS+QE KYR RY+DLI N +R+ F KR+QI
Sbjct: 130 TNHGELTVRVSEIRLLSKSLRPLPDKHKGLSDQETKYRQRYVDLIANAESRETFIKRSQI 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I S+R+FM ++EVETP++H+ PGGA AKPF+THHN+L++ ++LRIAPELYLKRL++G
Sbjct: 190 IQSVRNFMVGEKYLEVETPMMHSIPGGATAKPFVTHHNALDIPLYLRIAPELYLKRLVVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDC-IGTT 239
G ++FEIN++FRNEG+S RHNPEFTMIEFY A+++Y +M+ E +I+ G+
Sbjct: 250 GLERVFEINRSFRNEGMSVRHNPEFTMIEFYEAFSDYNRMMQMAEDIIRNACKTVNSGSL 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
KI+Y G+ +D FE+LTI++AIKKY PQY + L + +LK E+ K L
Sbjct: 310 KIEYNGKEVDLESPFERLTILQAIKKYNPQYTDEQLNDAEWLKKEIVKHGESLPHASGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ LQL LFE E+KLWNPT+I +YP E+SPLAR S+ + +TERFELF++G E+
Sbjct: 370 S-----LQLALFEGCAESKLWNPTFIVDYPVEVSPLARASDTK-QGLTERFELFVVGREL 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
ANG+SELNDPE+Q+ RFK Q+ K+ + E + +YD DYI A+E+G+PP GCGIG+DRL
Sbjct: 424 ANGYSELNDPEDQAARFKAQVAQKDAGDDE-AMHYDADYIRAMEFGLPPTGGCGIGIDRL 482
Query: 420 IMLLTNSKNIRDVILFPHLRNE 441
+MLLTN++ IRDVILFP +R E
Sbjct: 483 VMLLTNAQTIRDVILFPQMRPE 504
>gi|349611091|ref|ZP_08890404.1| lysyl-tRNA synthetase [Neisseria sp. GT4A_CT1]
gi|348614901|gb|EGY64438.1| lysyl-tRNA synthetase [Neisseria sp. GT4A_CT1]
Length = 503
Score = 513 bits (1320), Expect = e-143, Method: Compositional matrix adjust.
Identities = 238/441 (53%), Positives = 327/441 (74%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR MGK SF +QD +G +IQLY++N+ + + + DF ++D+GDI+GA+GTLFK
Sbjct: 75 MLKRQMGKASFATIQDVTG-----QIQLYLNNKGVSQEVLDDFNHWDLGDIVGAEGTLFK 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GEL+++VS ++L++KSLRPLP+K + LS+QE KYR RY+DLI NE +R F KR+QI
Sbjct: 130 TNHGELTVRVSDIRLLSKSLRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQI 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I S+R+FM ++EVETP++H PGGA AKPF+THHN+L++ ++LRIAPELYLKRL++G
Sbjct: 190 IQSVRNFMVNEHYLEVETPMMHPIPGGATAKPFVTHHNALDIPLYLRIAPELYLKRLVVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN++FRNEG+S RHNPEFTMIEFY A+++Y +M+ E +I+ GT K
Sbjct: 250 GLERVFEINRSFRNEGMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTAK 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I Y G+ +D FE+LTI+EAIKKY P Y + L ++ +LK E+ K + +
Sbjct: 310 ISYNGKEVDLESPFERLTILEAIKKYNPHYTDEQLNDEEWLKKEIVKHGESLPPSPGIGS 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E KLWNPT+I +YP E+SPLAR S+ + +TERFELF++G E+A
Sbjct: 370 -----LQLALFEGCAEGKLWNPTFIVDYPVEVSPLARASDTK-QGLTERFELFVVGRELA 423
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RFK Q+ K+ + E + +YD DYI A+E+G+PP GCGIG+DRL+
Sbjct: 424 NGYSELNDPEDQAERFKAQVAQKDAGDDE-AMHYDADYIRAMEFGLPPTGGCGIGIDRLV 482
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S+ IRDVILFP +R E
Sbjct: 483 MLLTDSQTIRDVILFPQMRPE 503
>gi|340361006|ref|ZP_08683453.1| lysine--tRNA ligase [Neisseria macacae ATCC 33926]
gi|339889151|gb|EGQ78543.1| lysine--tRNA ligase [Neisseria macacae ATCC 33926]
Length = 503
Score = 513 bits (1320), Expect = e-143, Method: Compositional matrix adjust.
Identities = 238/441 (53%), Positives = 326/441 (73%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR MGK SF +QD +G +IQLY++N+ + + + DF ++D+GDI+GA+GTLFK
Sbjct: 75 MLKRQMGKASFATIQDVTG-----QIQLYLNNKGVSQEVLDDFNHWDLGDIVGAEGTLFK 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GEL+++VS ++L++KSLRPLP+K + LS+QE KYR RY+DLI NE +R F KR+QI
Sbjct: 130 TNHGELTVRVSDIRLLSKSLRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQI 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I S+R+FM ++EVETP++H PGGA AKPF+THHN+L++ ++LRIAPELYLKRL++G
Sbjct: 190 IQSVRNFMVNEHYLEVETPMMHPIPGGATAKPFVTHHNALDIPLYLRIAPELYLKRLVVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN++FRNEG+S RHNPEFTMIEFY A+++Y +M+ E +I+ GT K
Sbjct: 250 GLERVFEINRSFRNEGMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTAK 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I Y G+ +D FE+LTI+EAIKKY P Y + L + +LK E+ K + +
Sbjct: 310 ISYNGKEVDLESPFERLTILEAIKKYNPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGS 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E KLWNPT+I +YP E+SPLAR S+ + +TERFELF++G E+A
Sbjct: 370 -----LQLALFEGCAEGKLWNPTFIVDYPVEVSPLARASDTK-QGLTERFELFVVGRELA 423
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RFK Q+ K+ + E + +YD DYI A+E+G+PP GCGIG+DRL+
Sbjct: 424 NGYSELNDPEDQAERFKAQVAQKDAGDDE-AMHYDADYIRAMEFGLPPTGGCGIGIDRLV 482
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S+ IRDVILFP +R E
Sbjct: 483 MLLTDSQTIRDVILFPQMRPE 503
>gi|419797810|ref|ZP_14323264.1| lysine--tRNA ligase [Neisseria sicca VK64]
gi|385697056|gb|EIG27512.1| lysine--tRNA ligase [Neisseria sicca VK64]
Length = 503
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/441 (53%), Positives = 326/441 (73%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR MGK SF +QD +G +IQLY++N+ + + + DF ++D+GDI+GA+GTLFK
Sbjct: 75 MLKRQMGKASFATIQDVTG-----QIQLYLNNKGVSQEVLDDFNHWDLGDIVGAEGTLFK 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GEL+++VS ++L++KSLRPLP+K + LS+QE KYR RY+DLI NE +R F KR+QI
Sbjct: 130 TNHGELTVRVSDIRLLSKSLRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQI 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I S+R+FM ++EVETP++H PGGA AKPF+THHN+L++ ++LRIAPELYLKRL++G
Sbjct: 190 IQSVRNFMVNEHYLEVETPMMHPIPGGATAKPFVTHHNALDIPLYLRIAPELYLKRLVVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN++FRNEG+S RHNPEFTMIEFY A+++Y +M+ E +I+ GT K
Sbjct: 250 GLERVFEINRSFRNEGMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTAK 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I Y G+ +D FE+LTI+EAIKKY P Y + L + +LK E+ K + +
Sbjct: 310 ISYNGKEVDLESPFERLTILEAIKKYNPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGS 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E KLWNPT+I +YP E+SPLAR S+ + +TERFELF++G E+A
Sbjct: 370 -----LQLALFEGCAEGKLWNPTFIVDYPVEVSPLARASDTK-QGLTERFELFVVGRELA 423
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RFK Q+ K+ + E + +YD DYI A+E+G+PP GCGIG+DRL+
Sbjct: 424 NGYSELNDPEDQAERFKAQVAQKDAGDDE-AMHYDADYIRAMEFGLPPTGGCGIGIDRLV 482
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S+ IRDVILFP +R E
Sbjct: 483 MLLTDSQTIRDVILFPQMRPE 503
>gi|325267116|ref|ZP_08133785.1| lysine--tRNA ligase [Kingella denitrificans ATCC 33394]
gi|324981469|gb|EGC17112.1| lysine--tRNA ligase [Kingella denitrificans ATCC 33394]
Length = 504
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/441 (53%), Positives = 326/441 (73%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR MGK SF +QD +G +IQLY++N+ + + + DF ++D+GDIIGA+GTLFK
Sbjct: 76 MLKREMGKASFATIQDVTG-----QIQLYLNNKGVSQEVLDDFNHWDLGDIIGAEGTLFK 130
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T GEL+++VS ++L++KSLRPLP+K + LS+QE KYR RY+DLI NE +R F KR+QI
Sbjct: 131 TGKGELTVRVSDIRLLSKSLRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQI 190
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I S+R+FM ++EVETP++H PGGA AKPF+THHN+L++ ++LRIAPELYLKRL++G
Sbjct: 191 IQSVRNFMVNEHYLEVETPMMHPIPGGATAKPFVTHHNALDIPLYLRIAPELYLKRLVVG 250
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN++FRNEG+S RHNPEFTMIEFY A+++Y +M+ E +I+ GT K
Sbjct: 251 GLERVFEINRSFRNEGMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTAK 310
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I Y G+ +D FE+LTI+EAIKKY P Y + L + +LK E+ K + +
Sbjct: 311 ISYNGKEVDLESPFERLTILEAIKKYNPHYTDEQLNDAEWLKKEVVKHGESLPPSPGIGS 370
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E+KLWNPT+I +YP E+SPLAR S+ + +TERFELF++G E+A
Sbjct: 371 -----LQLALFEGCAESKLWNPTFIVDYPVEVSPLARASDTK-QGLTERFELFVVGRELA 424
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RFK Q+ K+ + E + +YD DYI A+E+G+PP GCGIG+DRL+
Sbjct: 425 NGYSELNDPEDQAERFKAQVAQKDAGDDE-AMHYDADYIRAMEFGLPPTGGCGIGIDRLV 483
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S+ IRDVILFP +R E
Sbjct: 484 MLLTDSQTIRDVILFPQMRPE 504
>gi|254805207|ref|YP_003083428.1| lysyl-tRNA synthetase [Neisseria meningitidis alpha14]
gi|254668749|emb|CBA06609.1| lysyl-tRNA synthetase [Neisseria meningitidis alpha14]
Length = 503
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/441 (53%), Positives = 326/441 (73%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR MGK SF +QD SG +IQLY++N+ + + + DF ++D+GDI+GA+GTLFK
Sbjct: 75 MLKRQMGKASFATIQDVSG-----QIQLYLNNKGVSQEVLDDFNHWDLGDIVGAEGTLFK 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GEL+++VS ++L++KSLRPLP+K + LS+QE KYR RY+DLI NE +R F KR+QI
Sbjct: 130 TNHGELTVRVSDIRLLSKSLRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQI 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I S+R+FM ++EVETP++H PGGA AKPF+THHN+L++ ++LRIAPELYLKRL++G
Sbjct: 190 IQSVRNFMVGEHYLEVETPMMHPIPGGATAKPFVTHHNALDIPLYLRIAPELYLKRLVVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN++FRNEG+S RHNPEFTMIEFY A+++Y +M+ E +I+ GT
Sbjct: 250 GLERVFEINRSFRNEGMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTAN 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I Y G+ +D FE+LTI+EAIKKY P Y + L + +LK E+ K + +
Sbjct: 310 ITYNGKEVDLESPFERLTILEAIKKYNPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGS 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E KLWNPT+I +YP E+SPLAR S+ + +TERFELF++G E+A
Sbjct: 370 -----LQLALFEGCAEGKLWNPTFIVDYPVEVSPLARASDTK-QGLTERFELFVVGRELA 423
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RFK+Q+ K+ + E + +YD DYI A+E+G+PP GCGIG+DRL+
Sbjct: 424 NGYSELNDPEDQAERFKSQVAQKDAGDDE-AMHYDADYIRAMEFGLPPTGGCGIGIDRLV 482
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S+ IRDVILFP +R E
Sbjct: 483 MLLTDSQTIRDVILFPQMRPE 503
>gi|299530673|ref|ZP_07044088.1| lysyl-tRNA synthetase [Comamonas testosteroni S44]
gi|298721189|gb|EFI62131.1| lysyl-tRNA synthetase [Comamonas testosteroni S44]
Length = 514
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 244/441 (55%), Positives = 325/441 (73%), Gaps = 10/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD +G +IQ Y++ + +G+ +Y DFK +D+GDII +G L K
Sbjct: 83 MLKRVMGKASFATVQDATG-----RIQAYVTRDAVGEEVYADFKKWDLGDIISVEGQLMK 137
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELSIK + ++L+TKSLRP+P+KF +++ E K R RY+DL+ +E RK F R++
Sbjct: 138 TKTGELSIKATKIRLLTKSLRPMPDKFHGMADLEQKVRQRYVDLMTDEEARKRFVARSKA 197
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
++ IR FM ++ F+EVETP+LH PGGA AKPFITHHN+L+ +M+LRIAPELYLKRLI+G
Sbjct: 198 VAGIRDFMVEHGFLEVETPMLHPIPGGANAKPFITHHNALDQEMYLRIAPELYLKRLIVG 257
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEGIS RHNPEFTM+EFYAAY NY LM +TEK+I+ M +GT +
Sbjct: 258 GFERVFEINRNFRNEGISVRHNPEFTMMEFYAAYWNYQDLMDYTEKLIRDAAMKAVGTLE 317
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ Y G+ +D +K FE+LTI EAI KYT + + N+ +L + LKK+ K ++ K L+
Sbjct: 318 LSYGGKPVDLAKPFERLTIPEAIVKYTEAGDNVG--NREWLTNALKKLGMKEDKDK-LST 374
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQ++ FEE E KLWNPT+I +PTEISPLAR +N E +TERFEL+I G E
Sbjct: 375 RTLASLQVLYFEEVVEDKLWNPTFIMEHPTEISPLAR-ANDERPEVTERFELYITGREFG 433
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RF Q++ K+ + E + Y+D D++ ALEYGMPP GCGIG+DR +
Sbjct: 434 NGFSELNDAEDQAARFNAQVEAKDGGDDE-AMYFDHDFVRALEYGMPPTGGCGIGIDRFM 492
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S +IRDVILFP LR E
Sbjct: 493 MLLTDSASIRDVILFPALRRE 513
>gi|418530619|ref|ZP_13096542.1| lysyl-tRNA synthetase [Comamonas testosteroni ATCC 11996]
gi|371452338|gb|EHN65367.1| lysyl-tRNA synthetase [Comamonas testosteroni ATCC 11996]
Length = 516
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 243/442 (54%), Positives = 325/442 (73%), Gaps = 10/442 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD +G +IQ Y++ + +G+ +Y DFK +D+GDII +G L K
Sbjct: 83 MLKRVMGKASFATVQDATG-----RIQAYVTRDAVGEEVYADFKKWDLGDIIAVEGQLMK 137
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELSIK + ++L+TKSLRP+P+KF +++ E K R RY+DL+ +E RK F R++
Sbjct: 138 TKTGELSIKATKIRLLTKSLRPMPDKFHGMADLEQKVRQRYVDLMTDEEARKRFVARSKA 197
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
++ IR FM ++ F+EVETP+LH PGGA AKPFITHHN+L+ +M+LRIAPELYLKRLI+G
Sbjct: 198 VAGIRDFMVEHGFLEVETPMLHPIPGGANAKPFITHHNALDQEMYLRIAPELYLKRLIVG 257
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEGIS RHNPEFTM+EFYAAY NY LM +TEK+I+ + +GT +
Sbjct: 258 GFERVFEINRNFRNEGISVRHNPEFTMMEFYAAYWNYQDLMDYTEKLIRDAAIKAVGTLE 317
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ Y G+ +D +K FE+LTI EAI KYT + + N+ +L + LKK+ K ++ K L+
Sbjct: 318 LSYGGKPVDLAKPFERLTIPEAIVKYTEAGDNV--ANREWLTNALKKLGMKEDKDK-LST 374
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQ++ FEE E KLWNPT+I +PTEISPLAR +N E +TERFEL+I G E
Sbjct: 375 RTLASLQVLYFEEVVEEKLWNPTFIMEHPTEISPLAR-ANDERPEVTERFELYITGREFG 433
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RF Q++ K+ + E + Y+D D++ ALEYGMPP GCGIG+DR +
Sbjct: 434 NGFSELNDAEDQAARFNAQVEAKDGGDDE-AMYFDHDFVRALEYGMPPTGGCGIGIDRFM 492
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S +IRDVILFP LR E
Sbjct: 493 MLLTDSASIRDVILFPALRREQ 514
>gi|319639579|ref|ZP_07994326.1| lysyl-tRNA synthetase [Neisseria mucosa C102]
gi|317399150|gb|EFV79824.1| lysyl-tRNA synthetase [Neisseria mucosa C102]
Length = 503
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 239/441 (54%), Positives = 326/441 (73%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR MGK SF +QD +G +IQLY++N+ + + + DF ++D+GDI+GAKGTLFK
Sbjct: 75 MLKRQMGKASFATIQDVTG-----QIQLYLNNKGVSQEVLDDFNHWDLGDIVGAKGTLFK 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GEL+++VS ++L++KSLRPLP+K + LS+QE KYR RY+DLI NE +R F KR+QI
Sbjct: 130 TNHGELTVRVSDIRLLSKSLRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQI 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I S+R+FM ++EVETP++H PGGA AKPF+THHN+L++ ++LRIAPELYLKRL++G
Sbjct: 190 IQSVRNFMVNEHYLEVETPMMHPIPGGATAKPFVTHHNALDIPLYLRIAPELYLKRLVVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN++FRNEG+S RHNPEFTMIEFY A+++Y +M+ E +I+ GT K
Sbjct: 250 GLERVFEINRSFRNEGMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRAVNGTAK 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I Y G+ +D FE+LTI+EAIKKY P Y + L ++ +LK E+ K + +
Sbjct: 310 ISYNGKEVDLESPFERLTILEAIKKYNPHYTDEQLNDEEWLKKEIVKHGESLPPSPGIGS 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E KLWNPT+I +YP E+SPLAR S+ +TERFELF++G E+A
Sbjct: 370 -----LQLALFEGCAEGKLWNPTFIIDYPVEVSPLARASD-SKPGLTERFELFVVGRELA 423
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RFK Q+ K+ + E + +YD DYI A+E+G+PP GCGIG+DRL+
Sbjct: 424 NGYSELNDPEDQAERFKAQVAQKDAGDDE-AMHYDADYIRAMEFGLPPTGGCGIGIDRLV 482
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S+ IRDVILFP +R E
Sbjct: 483 MLLTDSQTIRDVILFPQMRPE 503
>gi|385328678|ref|YP_005882981.1| lysyl-tRNA synthetase [Neisseria meningitidis alpha710]
gi|308389530|gb|ADO31850.1| lysyl-tRNA synthetase [Neisseria meningitidis alpha710]
Length = 503
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/441 (53%), Positives = 325/441 (73%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR MGK SF +QD SG +IQLY++N+ + + + DF ++D+GDI+GA+GTLFK
Sbjct: 75 MLKRQMGKASFATIQDVSG-----QIQLYLNNKGVSQEVLDDFNHWDLGDIVGAEGTLFK 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GEL+++VS ++L++KSLRPLP+K + LS+QE KYR RY+DLI NE +R F KR+QI
Sbjct: 130 TNQGELTVRVSGIRLLSKSLRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQI 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I S+R+FM ++EVETP++H PGGA AKPF+THHN+L++ ++LRIAPELYLKRL++G
Sbjct: 190 IQSVRNFMVGEHYLEVETPMMHPIPGGATAKPFVTHHNALDIPLYLRIAPELYLKRLVVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN++FRNEG+S RHNPEFTMIEFY A+++Y +M+ E +I+ GT
Sbjct: 250 GLERVFEINRSFRNEGMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTAN 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I Y G+ +D FE+LTI+EAIKKY P Y + L + +LK E+ K + +
Sbjct: 310 ITYNGKEVDLESPFERLTILEAIKKYNPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGS 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E KLWNPT+I +YP E+SPLAR S+ + +TERFELF++G E+A
Sbjct: 370 -----LQLALFEGCAEGKLWNPTFIVDYPVEVSPLARASDTK-QGLTERFELFVVGRELA 423
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RFK Q+ K+ + E + +YD DYI A+E+G+PP GCGIG+DRL+
Sbjct: 424 NGYSELNDPEDQAERFKAQVAQKDAGDDE-AMHYDADYIRAMEFGLPPTGGCGIGIDRLV 482
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S+ IRDVILFP +R E
Sbjct: 483 MLLTDSQTIRDVILFPQMRPE 503
>gi|261401860|ref|ZP_05987985.1| lysine--tRNA ligase [Neisseria lactamica ATCC 23970]
gi|269207986|gb|EEZ74441.1| lysine--tRNA ligase [Neisseria lactamica ATCC 23970]
Length = 503
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/441 (53%), Positives = 325/441 (73%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR MGK SF +QD SG +IQLY++N+ + + + DF ++D+GDI+GA+GTLFK
Sbjct: 75 MLKRQMGKASFATIQDVSG-----QIQLYLNNKGVSQEVLDDFNHWDLGDIVGAEGTLFK 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GEL+++VS ++L++KSLRPLP+K + LS+QE KYR RY+DLI NE +R F KR+QI
Sbjct: 130 TNHGELTVRVSDIRLLSKSLRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQI 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I S+R+FM ++EVETP++H PGGA AKPF+THHN+L++ ++LRIAPELYLKRL++G
Sbjct: 190 IQSVRNFMVGEHYLEVETPMMHPIPGGATAKPFVTHHNALDIPLYLRIAPELYLKRLVVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN++FRNEG+S RHNPEFTMIEFY A+++Y +M+ E +I+ GT
Sbjct: 250 GLERVFEINRSFRNEGMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTAN 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I Y G+ +D FE+LTI+EAIKKY P Y + L + +LK E+ K + +
Sbjct: 310 ITYNGKEVDLESPFERLTILEAIKKYNPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGS 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E KLWNPT+I +YP E+SPLAR S+ + +TERFELF++G E+A
Sbjct: 370 -----LQLALFEGCAEGKLWNPTFIVDYPVEVSPLARASDTK-QGLTERFELFVVGRELA 423
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RFK Q+ K+ + E + +YD DYI A+E+G+PP GCGIG+DRL+
Sbjct: 424 NGYSELNDPEDQAERFKAQVAQKDAGDDE-AMHYDADYIRAMEFGLPPTGGCGIGIDRLV 482
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S+ IRDVILFP +R E
Sbjct: 483 MLLTDSQTIRDVILFPQMRPE 503
>gi|385850997|ref|YP_005897512.1| lysyl-tRNA synthetase [Neisseria meningitidis M04-240196]
gi|325205820|gb|ADZ01273.1| lysyl-tRNA synthetase [Neisseria meningitidis M04-240196]
Length = 503
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/441 (53%), Positives = 325/441 (73%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR MGK SF +QD SG +IQLY++N+ + + + DF ++D+GDI+GA+GTLFK
Sbjct: 75 MLKRQMGKASFATIQDVSG-----QIQLYLNNKGVSQEVLDDFNHWDLGDIVGAEGTLFK 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GEL+++VS ++L++KSLRPLP+K + LS+QE KYR RY+DLI NE +R F KR+QI
Sbjct: 130 TNHGELTVRVSDIRLLSKSLRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQI 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I S+R+FM ++EVETP++H PGGA AKPF+THHN+L++ ++LRIAPELYLKRL++G
Sbjct: 190 IQSVRNFMVGEHYLEVETPMMHPIPGGATAKPFVTHHNALDIPLYLRIAPELYLKRLVVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN++FRNEG+S RHNPEFTMIEFY A+++Y +M+ E +I+ GT
Sbjct: 250 GLERVFEINRSFRNEGMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTAN 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I Y G+ +D FE+LTI+EAIKKY P Y + L + +LK E+ K + +
Sbjct: 310 ITYNGKEVDLESPFERLTILEAIKKYNPHYTDQQLNDAEWLKKEIVKHGESLPPSPGIGS 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E KLWNPT+I +YP E+SPLAR S+ + +TERFELF++G E+A
Sbjct: 370 -----LQLALFEGCAEGKLWNPTFIVDYPVEVSPLARASDTK-QGLTERFELFVVGRELA 423
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RFK Q+ K+ + E + +YD DYI A+E+G+PP GCGIG+DRL+
Sbjct: 424 NGYSELNDPEDQAERFKAQVAQKDAGDDE-AMHYDADYIRAMEFGLPPTGGCGIGIDRLV 482
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S+ IRDVILFP +R E
Sbjct: 483 MLLTDSQTIRDVILFPQMRPE 503
>gi|345875773|ref|ZP_08827562.1| lysine--tRNA ligase [Neisseria weaveri LMG 5135]
gi|343968471|gb|EGV36699.1| lysine--tRNA ligase [Neisseria weaveri LMG 5135]
Length = 506
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 236/441 (53%), Positives = 330/441 (74%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
ML+R MGK SF +QD SG +IQ+Y++N+ +G++++ FK++D+GDIIG +GTLFK
Sbjct: 78 MLQRAMGKASFATIQDVSG-----QIQVYVNNQGVGEDVHNAFKHWDLGDIIGVEGTLFK 132
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GEL+++ S L L+TKSLRPLP+K + L++QE KYR RY DLI N+++R F KR++I
Sbjct: 133 TNHGELTVRASKLHLLTKSLRPLPDKHKGLTDQEQKYRQRYADLITNQDSRDTFIKRSKI 192
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I ++R++M ++EVETP++H PGGA AKPF+THHN+L+M ++LRIAPELYLKRL++G
Sbjct: 193 IQAVRNYMVNERYLEVETPMMHPIPGGATAKPFVTHHNALDMPLYLRIAPELYLKRLVVG 252
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN++FRNEG+S RHNPEFTM+EFY A+ Y +M+ TE +I+ + GT K
Sbjct: 253 GLERVFEINRSFRNEGMSTRHNPEFTMMEFYEAFCTYERMMEMTEGVIRHAAKEVCGTAK 312
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ Y G+ +D FE+LTI+EAIKKY PQY + L + +LK E+ K + +KI +
Sbjct: 313 VSYNGKEVDLESPFERLTILEAIKKYNPQYTDEQLNDAEWLKKEIVK-----HGEKIPPS 367
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E+KLWNPT+I +YP E+SPLAR S+ + +T+RFELFI+G E+A
Sbjct: 368 PGIGSLQLALFEGCAESKLWNPTFIIDYPVEVSPLARASDTK-PGLTDRFELFIVGRELA 426
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RFK Q+ K+ + E + +YD DYI A+EYG+PP G GIG+DRL+
Sbjct: 427 NGYSELNDPEDQAARFKAQVAQKDAGDDE-AMHYDADYIRAMEYGLPPTGGSGIGLDRLV 485
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT++ +IRDVILFP +R E
Sbjct: 486 MLLTDAPSIRDVILFPQMRPE 506
>gi|296314356|ref|ZP_06864297.1| lysine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
gi|296838911|gb|EFH22849.1| lysine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
Length = 503
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/441 (53%), Positives = 325/441 (73%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR MGK SF +QD SG +IQLY++N+ + + + DF ++D+GDI+GA+GTLFK
Sbjct: 75 MLKRQMGKASFATIQDVSG-----QIQLYLNNKGVSQEILDDFNHWDLGDIVGAEGTLFK 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GEL+++VS ++L++KSLRPLP+K + LS+QE KYR RY+DLI NE +R F KR+QI
Sbjct: 130 TNHGELTVRVSGIRLLSKSLRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQI 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I S+R+FM ++EVETP++H PGGA AKPF+THHN+L++ ++LRIAPELYLKRL++G
Sbjct: 190 IQSVRNFMVGEHYLEVETPMMHPIPGGATAKPFVTHHNALDIPLYLRIAPELYLKRLVVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN++FRNEG+S RHNPEFTMIEFY A+++Y +M+ E +I+ GT
Sbjct: 250 GLERVFEINRSFRNEGMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTAN 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I Y G+ +D FE+LTI+EAIKKY P Y + L + +LK E+ K + +
Sbjct: 310 ITYNGKEVDLESPFERLTILEAIKKYNPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGS 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E KLWNPT+I +YP E+SPLAR S+ + +TERFELF++G E+A
Sbjct: 370 -----LQLALFEGCAEGKLWNPTFIVDYPVEVSPLARASDTK-QGLTERFELFVVGRELA 423
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RFK Q+ K+ + E + +YD DYI A+E+G+PP GCGIG+DRL+
Sbjct: 424 NGYSELNDPEDQAERFKTQVAQKDAGDDE-AMHYDADYIRAMEFGLPPTGGCGIGIDRLV 482
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S+ IRDVILFP +R E
Sbjct: 483 MLLTDSQTIRDVILFPQMRPE 503
>gi|416169996|ref|ZP_11608262.1| lysyl-tRNA synthetase [Neisseria meningitidis OX99.30304]
gi|325130491|gb|EGC53248.1| lysyl-tRNA synthetase [Neisseria meningitidis OX99.30304]
Length = 503
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/441 (53%), Positives = 326/441 (73%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR MGK SF +QD SG +IQLY++N+ + + + DF ++D+GDI+GA+GTLFK
Sbjct: 75 MLKRQMGKASFATIQDVSG-----QIQLYLNNKGVSQEILDDFNHWDLGDIVGAEGTLFK 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GEL+++VS ++L++KSLRPLP+K + LS+QE KYR RY+DLI N +R F KR+QI
Sbjct: 130 TNHGELTVRVSGIRLLSKSLRPLPDKHKGLSDQETKYRQRYVDLIANGESRNTFIKRSQI 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I S+R+FM ++EVETP++H PGGA AKPF+THHN+L++ ++LRIAPELYLKRL++G
Sbjct: 190 IQSVRNFMVGEHYLEVETPMMHPIPGGATAKPFVTHHNALDIPLYLRIAPELYLKRLVVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN++FRNEG+S RHNPEFTMIEFY A+++Y +M+ E +I+ GT K
Sbjct: 250 GLERVFEINRSFRNEGMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTAK 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I Y G+ +D FE+LTI+EAIKKY P Y + L + +LK E+ K + +
Sbjct: 310 ISYNGKEVDLESPFERLTILEAIKKYNPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGS 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E KLWNPT+I +YP E+SPLAR S+ + +TERFELF++G E+A
Sbjct: 370 -----LQLALFEGCAEGKLWNPTFIVDYPVEVSPLARASDTK-QGLTERFELFVVGRELA 423
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RFK+Q+ K+ + E + +YD DYI A+E+G+PP GCGIG+DRL+
Sbjct: 424 NGYSELNDPEDQAERFKSQVAQKDAGDDE-AMHYDADYIRAMEFGLPPTGGCGIGIDRLV 482
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S+ IRDVILFP +R E
Sbjct: 483 MLLTDSQTIRDVILFPQMRPE 503
>gi|225024787|ref|ZP_03713979.1| hypothetical protein EIKCOROL_01674 [Eikenella corrodens ATCC
23834]
gi|224942494|gb|EEG23703.1| hypothetical protein EIKCOROL_01674 [Eikenella corrodens ATCC
23834]
Length = 506
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 232/441 (52%), Positives = 326/441 (73%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
ML+R MGK SF LQD SG +IQLY++++ +G+ ++ +FK++D+GDI+GA+G LFK
Sbjct: 74 MLQRDMGKASFATLQDVSG-----QIQLYVNDQGVGEKIHEEFKHWDLGDILGAEGVLFK 128
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GEL+++VS ++L+ K+LRPLP+K L +QE +YR RY DLI+N +R++FKKR +I
Sbjct: 129 TNHGELTVRVSQIRLLAKALRPLPDKVHGLKDQETRYRQRYADLIVNAESREIFKKRGRI 188
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I +IR+FM ++EVETP++H GGA A+PF+THHN+L++ +F+RIAPELYLKRL++G
Sbjct: 189 IQTIRNFMTGEQYLEVETPMMHPIAGGAAARPFVTHHNALDIPLFMRIAPELYLKRLVVG 248
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+S RHNPEFTM+EFY A+++Y +M TE +I+ G+
Sbjct: 249 GFERVFEINRNFRNEGVSARHNPEFTMMEFYEAFSDYHRMMDMTEGVIRACANAVCGSLH 308
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ Y G+ +D K F++LTI++AIKKY P Y + L ++ +LK E+ K + +
Sbjct: 309 VPYNGKEVDLEKRFDRLTIVDAIKKYNPHYTDEQLNDEEWLKKEVVKHGEDLPAAPGIGS 368
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E KLWNPT+I +YP E+SPLAR S+ N +TERFELF +G E+A
Sbjct: 369 -----LQLALFEGCAEGKLWNPTFIIDYPVEVSPLARASDT-NPKLTERFELFAVGRELA 422
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RF++Q+ K E + + YD DYI A+EYG+PP GCGIG+DRL+
Sbjct: 423 NGYSELNDPEDQADRFRSQVAQK-EAGDDEAMNYDADYIRAMEYGLPPTGGCGIGIDRLV 481
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLTN+ +IRDVILFPH+R E
Sbjct: 482 MLLTNAPSIRDVILFPHMRPE 502
>gi|313667866|ref|YP_004048150.1| lysyl-tRNA synthetase [Neisseria lactamica 020-06]
gi|313005328|emb|CBN86761.1| lysyl-tRNA synthetase [Neisseria lactamica 020-06]
Length = 503
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/441 (53%), Positives = 325/441 (73%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR MGK SF +QD SG +IQLY++N+ + + + DF ++D+GDI+GA+GTLFK
Sbjct: 75 MLKRQMGKASFATIQDVSG-----QIQLYLNNKGVSQEVLDDFNHWDLGDIVGAEGTLFK 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GEL+++VS ++L++KSLRPLP+K + LS+QE KYR RY+DLI NE +R F KR+QI
Sbjct: 130 TNHGELTVRVSDIRLLSKSLRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQI 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I S+R+FM ++EVETP++H PGGA AKPF+THHN+L++ ++LRIAPELYLKRL++G
Sbjct: 190 IQSVRNFMVGEHYLEVETPMMHPIPGGATAKPFVTHHNALDIPLYLRIAPELYLKRLVVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN++FRNEG+S RHNPEFTMIEFY A+++Y +M+ E +I+ GT
Sbjct: 250 GLERVFEINRSFRNEGMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTAN 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I Y G+ +D FE+LTI+EAIKKY P Y + L + +LK E+ K + +
Sbjct: 310 ITYNGKEVDLESPFERLTILEAIKKYNPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGS 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E KLWNPT+I +YP E+SPLAR S+ + +TERFELF++G E+A
Sbjct: 370 -----LQLALFEGCAEGKLWNPTFIVDYPVEVSPLARASDTK-QGLTERFELFVVGRELA 423
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RFK Q+ K+ + E + +YD DYI A+E+G+PP GCGIG+DRL+
Sbjct: 424 NGYSELNDPEDQAERFKAQVAQKDAGDDE-AMHYDADYIRAMEFGLPPTGGCGIGIDRLV 482
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S+ IRDVILFP +R E
Sbjct: 483 MLLTDSQTIRDVILFPQMRPE 503
>gi|416203386|ref|ZP_11620066.1| lysyl-tRNA synthetase [Neisseria meningitidis 961-5945]
gi|325142613|gb|EGC65005.1| lysyl-tRNA synthetase [Neisseria meningitidis 961-5945]
Length = 503
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/441 (53%), Positives = 326/441 (73%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR MGK SF +QD SG +IQLY++N+ + + + DF ++D+GDI+GA+GTLFK
Sbjct: 75 MLKRQMGKASFATIQDVSG-----QIQLYLNNKGVSQEVLDDFNHWDLGDIVGAEGTLFK 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GEL+++VS ++L++KSLRPLP+K + LS+QE KYR RY+DLI NE +R F KR+QI
Sbjct: 130 TNHGELTVRVSGIRLLSKSLRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQI 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I S+R+FM ++EVETP++H PGGA AKPF+THHN+L++ ++LRIAPELYLKRL++G
Sbjct: 190 IQSVRNFMVGEHYLEVETPMMHPIPGGATAKPFVTHHNALDIPLYLRIAPELYLKRLVVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN++FRNEG+S RHNPEFTMIEFY A+++Y +M+ E +I+ GT
Sbjct: 250 GLERVFEINRSFRNEGMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTAN 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I Y G+ +D FE+LTI+EAIKKY P Y + L + +LK E+ K + +
Sbjct: 310 ITYNGKEVDLESPFERLTILEAIKKYNPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGS 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E KLWNPT+I +YP E+SPLAR S+ + +TERFELF++G E+A
Sbjct: 370 -----LQLALFEGCAEGKLWNPTFIIDYPVEVSPLARASDTK-QGLTERFELFVVGRELA 423
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RFK+Q+ K+ + E + +YD DYI A+E+G+PP GCGIG+DRL+
Sbjct: 424 NGYSELNDPEDQAERFKSQVAQKDAGDDE-AMHYDADYIRAMEFGLPPTGGCGIGIDRLV 482
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S+ IRDVILFP +R E
Sbjct: 483 MLLTDSQTIRDVILFPQMRPE 503
>gi|218768429|ref|YP_002342941.1| lysyl-tRNA synthetase [Neisseria meningitidis Z2491]
gi|385338261|ref|YP_005892134.1| lysyl-tRNA synthetase (lysine-tRNA ligase; LysRS) [Neisseria
meningitidis WUE 2594]
gi|433475843|ref|ZP_20433180.1| lysine--tRNA ligase [Neisseria meningitidis 88050]
gi|433479995|ref|ZP_20437284.1| lysine--tRNA ligase [Neisseria meningitidis 63041]
gi|433513741|ref|ZP_20470530.1| lysine--tRNA ligase [Neisseria meningitidis 63049]
gi|433515962|ref|ZP_20472730.1| lysine--tRNA ligase [Neisseria meningitidis 2004090]
gi|433517850|ref|ZP_20474595.1| lysine--tRNA ligase [Neisseria meningitidis 96023]
gi|433520197|ref|ZP_20476916.1| lysine--tRNA ligase [Neisseria meningitidis 65014]
gi|433524376|ref|ZP_20481035.1| lysine--tRNA ligase [Neisseria meningitidis 97020]
gi|433528493|ref|ZP_20485102.1| lysine--tRNA ligase [Neisseria meningitidis NM3652]
gi|433530699|ref|ZP_20487284.1| lysine--tRNA ligase [Neisseria meningitidis NM3642]
gi|433532962|ref|ZP_20489525.1| lysine--tRNA ligase [Neisseria meningitidis 2007056]
gi|433534720|ref|ZP_20491260.1| lysine--tRNA ligase [Neisseria meningitidis 2001212]
gi|433541274|ref|ZP_20497725.1| lysine--tRNA ligase [Neisseria meningitidis 63006]
gi|32130176|sp|Q9JTT7.1|SYK_NEIMA RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|121052437|emb|CAM08773.1| lysyl-tRNA synthetase [Neisseria meningitidis Z2491]
gi|319410675|emb|CBY91052.1| lysyl-tRNA synthetase (lysine-tRNA ligase; LysRS) [Neisseria
meningitidis WUE 2594]
gi|432208952|gb|ELK64923.1| lysine--tRNA ligase [Neisseria meningitidis 88050]
gi|432215733|gb|ELK71618.1| lysine--tRNA ligase [Neisseria meningitidis 63041]
gi|432247050|gb|ELL02493.1| lysine--tRNA ligase [Neisseria meningitidis 63049]
gi|432252888|gb|ELL08238.1| lysine--tRNA ligase [Neisseria meningitidis 2004090]
gi|432252967|gb|ELL08314.1| lysine--tRNA ligase [Neisseria meningitidis 96023]
gi|432253809|gb|ELL09146.1| lysine--tRNA ligase [Neisseria meningitidis 65014]
gi|432259020|gb|ELL14298.1| lysine--tRNA ligase [Neisseria meningitidis 97020]
gi|432265294|gb|ELL20490.1| lysine--tRNA ligase [Neisseria meningitidis NM3652]
gi|432265964|gb|ELL21154.1| lysine--tRNA ligase [Neisseria meningitidis NM3642]
gi|432266785|gb|ELL21967.1| lysine--tRNA ligase [Neisseria meningitidis 2007056]
gi|432271462|gb|ELL26587.1| lysine--tRNA ligase [Neisseria meningitidis 2001212]
gi|432276981|gb|ELL32031.1| lysine--tRNA ligase [Neisseria meningitidis 63006]
Length = 503
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/441 (53%), Positives = 325/441 (73%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR MGK SF +QD SG +IQLY++N+ + + + DF ++D+GDI+GA+GTLFK
Sbjct: 75 MLKRQMGKASFATIQDVSG-----QIQLYLNNKGVSQEVLDDFNHWDLGDIVGAEGTLFK 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GEL+++VS ++L++KSLRPLP+K + LS+QE KYR RY+DLI NE +R F KR+QI
Sbjct: 130 TNHGELTVRVSGIRLLSKSLRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQI 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I S+R+FM ++EVETP++H PGGA AKPF+THHN+L++ ++LRIAPELYLKRL++G
Sbjct: 190 IQSVRNFMVGEHYLEVETPMMHPIPGGATAKPFVTHHNALDIPLYLRIAPELYLKRLVVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN++FRNEG+S RHNPEFTMIEFY A+++Y +M+ E +I+ GT
Sbjct: 250 GLERVFEINRSFRNEGMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASHTVNGTAN 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I Y G+ +D FE+LTI+EAIKKY P Y + L + +LK E+ K + +
Sbjct: 310 ITYNGKEVDLESPFERLTILEAIKKYNPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGS 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E KLWNPT+I +YP E+SPLAR S+ + +TERFELF++G E+A
Sbjct: 370 -----LQLALFEGCAEGKLWNPTFIVDYPVEVSPLARASDTK-QGLTERFELFVVGRELA 423
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RFK Q+ K+ + E + +YD DYI A+E+G+PP GCGIG+DRL+
Sbjct: 424 NGYSELNDPEDQAERFKAQVAQKDAGDDE-AMHYDADYIRAMEFGLPPTGGCGIGIDRLV 482
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S+ IRDVILFP +R E
Sbjct: 483 MLLTDSQTIRDVILFPQMRPE 503
>gi|416182705|ref|ZP_11612141.1| lysyl-tRNA synthetase [Neisseria meningitidis M13399]
gi|433494948|ref|ZP_20452015.1| lysine--tRNA ligase [Neisseria meningitidis NM762]
gi|325134355|gb|EGC57000.1| lysyl-tRNA synthetase [Neisseria meningitidis M13399]
gi|389605446|emb|CCA44364.1| lysyl-tRNA synthetase [Neisseria meningitidis alpha522]
gi|432229596|gb|ELK85281.1| lysine--tRNA ligase [Neisseria meningitidis NM762]
Length = 503
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/441 (53%), Positives = 325/441 (73%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR MGK SF +QD SG +IQLY++N+ + + + DF ++D+GDI+GA+GTLFK
Sbjct: 75 MLKRQMGKASFATIQDVSG-----QIQLYLNNKGVSQEVLDDFNHWDLGDIVGAEGTLFK 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GEL+++VS ++L++KSLRPLP+K + LS+QE KYR RY+DLI NE +R F KR+QI
Sbjct: 130 TNHGELTVRVSGIRLLSKSLRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQI 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I S+R+FM ++EVETP++H PGGA AKPF+THHN+L++ ++LRIAPELYLKRL++G
Sbjct: 190 IQSVRNFMVGEHYLEVETPMMHPIPGGATAKPFVTHHNALDIPLYLRIAPELYLKRLVVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN++FRNEG+S RHNPEFTMIEFY A+++Y +M+ E +I+ GT
Sbjct: 250 GLERVFEINRSFRNEGMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTAN 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I Y G+ +D FE+LTI+EAIKKY P Y + L + +LK E+ K + +
Sbjct: 310 ITYNGKEVDLESPFERLTILEAIKKYNPHYTDEQLNDTEWLKKEIVKHGESLPPSPGIGS 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E KLWNPT+I +YP E+SPLAR S+ + +TERFELF++G E+A
Sbjct: 370 -----LQLALFEGCAEGKLWNPTFIVDYPVEVSPLARASDTK-QGLTERFELFVVGRELA 423
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RFK Q+ K+ + E + +YD DYI A+E+G+PP GCGIG+DRL+
Sbjct: 424 NGYSELNDPEDQAERFKAQVAQKDAGDDE-AMHYDADYIRAMEFGLPPTGGCGIGIDRLV 482
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S+ IRDVILFP +R E
Sbjct: 483 MLLTDSQTIRDVILFPQMRPE 503
>gi|385341670|ref|YP_005895541.1| lysyl-tRNA synthetase [Neisseria meningitidis M01-240149]
gi|385857482|ref|YP_005903994.1| lysyl-tRNA synthetase [Neisseria meningitidis NZ-05/33]
gi|421555021|ref|ZP_16000960.1| lysine--tRNA ligase [Neisseria meningitidis 98008]
gi|433537038|ref|ZP_20493542.1| lysine--tRNA ligase [Neisseria meningitidis 77221]
gi|325201876|gb|ADY97330.1| lysyl-tRNA synthetase [Neisseria meningitidis M01-240149]
gi|325208371|gb|ADZ03823.1| lysyl-tRNA synthetase [Neisseria meningitidis NZ-05/33]
gi|402332174|gb|EJU67505.1| lysine--tRNA ligase [Neisseria meningitidis 98008]
gi|432273004|gb|ELL28105.1| lysine--tRNA ligase [Neisseria meningitidis 77221]
Length = 503
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/441 (53%), Positives = 326/441 (73%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR MGK SF +QD SG +IQLY++N+ + + + DF ++D+GDI+GA+GTLFK
Sbjct: 75 MLKRQMGKASFATIQDVSG-----QIQLYLNNKGVSQEVLDDFNHWDLGDIVGAEGTLFK 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GEL+++VS ++L++KSLRPLP+K + LS+QE KYR RY+DLI NE +R F KR+QI
Sbjct: 130 TNHGELTVRVSDIRLLSKSLRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQI 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I S+R+FM ++EVETP++H PGGA AKPF+THHN+L++ ++LRIAPELYLKRL++G
Sbjct: 190 IQSVRNFMVGEHYLEVETPMMHPIPGGATAKPFVTHHNALDIPLYLRIAPELYLKRLVVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN++FRNEG+S RHNPEFTMIEFY A+++Y +M+ E +I+ GT
Sbjct: 250 GLERVFEINRSFRNEGMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTAN 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I Y G+ +D FE+LTI+EAIKKY P Y + L + +LK E+ K + +
Sbjct: 310 ITYNGKEVDLESPFERLTILEAIKKYNPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGS 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E KLWNPT+I +YP E+SPLAR S+ + +TERFELF++G E+A
Sbjct: 370 -----LQLALFEGCAEGKLWNPTFIIDYPVEVSPLARASDTK-QGLTERFELFVVGRELA 423
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RFK+Q+ K+ + E + +YD DYI A+E+G+PP GCGIG+DRL+
Sbjct: 424 NGYSELNDPEDQAERFKSQVAQKDAGDDE-AMHYDADYIRAMEFGLPPTGGCGIGIDRLV 482
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S+ IRDVILFP +R E
Sbjct: 483 MLLTDSQTIRDVILFPQMRPE 503
>gi|161870293|ref|YP_001599463.1| lysyl-tRNA synthetase [Neisseria meningitidis 053442]
gi|161595846|gb|ABX73506.1| lysyl-tRNA synthetase [Neisseria meningitidis 053442]
Length = 491
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/441 (53%), Positives = 325/441 (73%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR MGK SF +QD SG +IQLY++N+ + + + DF ++D+GDI+GA+GTLFK
Sbjct: 63 MLKRQMGKASFATIQDVSG-----QIQLYLNNKGVSQEVLDDFNHWDLGDIVGAEGTLFK 117
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GEL+++VS ++L++KSLRPLP+K + LS+QE KYR RY+DLI NE +R F KR+QI
Sbjct: 118 TNHGELTVRVSGIRLLSKSLRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQI 177
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I S+R+FM ++EVETP++H PGGA AKPF+THHN+L++ ++LRIAPELYLKRL++G
Sbjct: 178 IQSVRNFMVGEHYLEVETPMMHPIPGGATAKPFVTHHNALDIPLYLRIAPELYLKRLVVG 237
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN++FRNEG+S RHNPEFTMIEFY A+++Y +M+ E +I+ GT
Sbjct: 238 GLERVFEINRSFRNEGMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASHTVNGTAN 297
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I Y G+ +D FE+LTI+EAIKKY P Y + L + +LK E+ K + +
Sbjct: 298 ITYNGKEVDLESPFERLTILEAIKKYNPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGS 357
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E KLWNPT+I +YP E+SPLAR S+ + +TERFELF++G E+A
Sbjct: 358 -----LQLALFEGCAEGKLWNPTFIVDYPVEVSPLARASDTK-QGLTERFELFVVGRELA 411
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RFK Q+ K+ + E + +YD DYI A+E+G+PP GCGIG+DRL+
Sbjct: 412 NGYSELNDPEDQAERFKAQVAQKDAGDDE-AMHYDADYIRAMEFGLPPTGGCGIGIDRLV 470
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S+ IRDVILFP +R E
Sbjct: 471 MLLTDSQTIRDVILFPQMRPE 491
>gi|304387240|ref|ZP_07369437.1| lysine--tRNA ligase [Neisseria meningitidis ATCC 13091]
gi|416161132|ref|ZP_11606295.1| lysyl-tRNA synthetase [Neisseria meningitidis N1568]
gi|433473811|ref|ZP_20431171.1| lysine--tRNA ligase [Neisseria meningitidis 97021]
gi|433481371|ref|ZP_20438638.1| lysine--tRNA ligase [Neisseria meningitidis 2006087]
gi|433484359|ref|ZP_20441583.1| lysine--tRNA ligase [Neisseria meningitidis 2002038]
gi|433486630|ref|ZP_20443823.1| lysine--tRNA ligase [Neisseria meningitidis 97014]
gi|304338728|gb|EFM04841.1| lysine--tRNA ligase [Neisseria meningitidis ATCC 13091]
gi|325128487|gb|EGC51366.1| lysyl-tRNA synthetase [Neisseria meningitidis N1568]
gi|432209272|gb|ELK65241.1| lysine--tRNA ligase [Neisseria meningitidis 97021]
gi|432218128|gb|ELK73991.1| lysine--tRNA ligase [Neisseria meningitidis 2006087]
gi|432220290|gb|ELK76113.1| lysine--tRNA ligase [Neisseria meningitidis 2002038]
gi|432221270|gb|ELK77082.1| lysine--tRNA ligase [Neisseria meningitidis 97014]
Length = 503
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/441 (53%), Positives = 326/441 (73%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR MGK SF +QD SG +IQLY++N+ + + + DF ++D+GDI+GA+GTLFK
Sbjct: 75 MLKRQMGKASFATIQDVSG-----QIQLYLNNKGVSQEVLDDFNHWDLGDIVGAEGTLFK 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GEL+++VS ++L++KSLRPLP+K + LS+QE KYR RY+DLI NE +R F KR+QI
Sbjct: 130 TNHGELTVRVSDIRLLSKSLRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQI 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I S+R+FM ++EVETP++H PGGA AKPF+THHN+L++ ++LRIAPELYLKRL++G
Sbjct: 190 IQSVRNFMVGEHYLEVETPMMHPIPGGATAKPFVTHHNALDIPLYLRIAPELYLKRLVVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN++FRNEG+S RHNPEFTMIEFY A+++Y +M+ E +I+ GT
Sbjct: 250 GLERVFEINRSFRNEGMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTAN 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I Y G+ +D FE+LTI+EAIKKY P Y + L + +LK E+ K + +
Sbjct: 310 ITYNGKEVDLESPFERLTILEAIKKYNPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGS 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E KLWNPT+I +YP E+SPLAR S+ + +TERFELF++G E+A
Sbjct: 370 -----LQLALFEGCAEGKLWNPTFIIDYPVEVSPLARASDTK-QGLTERFELFVVGRELA 423
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RFK+Q+ K+ + E + +YD DYI A+E+G+PP GCGIG+DRL+
Sbjct: 424 NGYSELNDPEDQAERFKSQVAQKDAGDDE-AMHYDADYIRAMEFGLPPTGGCGIGIDRLV 482
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S+ IRDVILFP +R E
Sbjct: 483 MLLTDSQTIRDVILFPQMRPE 503
>gi|416187303|ref|ZP_11614173.1| lysyl-tRNA synthetase [Neisseria meningitidis M0579]
gi|254672942|emb|CBA07339.1| lysyl-tRNA synthetase [Neisseria meningitidis alpha275]
gi|325136531|gb|EGC59135.1| lysyl-tRNA synthetase [Neisseria meningitidis M0579]
Length = 503
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/441 (53%), Positives = 326/441 (73%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR MGK SF +QD SG +IQLY++N+ + + + DF ++D+GDI+GA+GTLFK
Sbjct: 75 MLKRQMGKASFATIQDVSG-----QIQLYLNNKGVSQEILDDFNHWDLGDIVGAEGTLFK 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GEL+++VS ++L++KSLRPLP+K + LS+QE KYR RY+DLI NE +R F KR+QI
Sbjct: 130 TNHGELTVRVSDIRLLSKSLRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQI 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I S+R+FM ++EVETP++H PGGA AKPF+THHN+L++ ++LRIAPELYLKRL++G
Sbjct: 190 IQSVRNFMVNERYLEVETPMMHPIPGGATAKPFVTHHNALDIPLYLRIAPELYLKRLVVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN++FRNEG+S RHNPEFTMIEFY A+++Y +M+ E +I+ GT
Sbjct: 250 GLERVFEINRSFRNEGMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTAN 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I Y G+ +D FE+LTI+EAIKKY P Y + L + +LK E+ K + +
Sbjct: 310 ITYNGKEVDLESPFERLTILEAIKKYNPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGS 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E KLWNPT+I +YP E+SPLAR S+ + +TERFELF++G E+A
Sbjct: 370 -----LQLALFEGCAEGKLWNPTFIIDYPVEVSPLARASDTK-QGLTERFELFVVGRELA 423
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RFK+Q+ K+ + E + +YD DYI A+E+G+PP GCGIG+DRL+
Sbjct: 424 NGYSELNDPEDQAERFKSQVAQKDAGDDE-AMHYDADYIRAMEFGLPPTGGCGIGIDRLV 482
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S+ IRDVILFP +R E
Sbjct: 483 MLLTDSQTIRDVILFPQMRPE 503
>gi|421559537|ref|ZP_16005410.1| lysine--tRNA ligase [Neisseria meningitidis 92045]
gi|402335336|gb|EJU70602.1| lysine--tRNA ligase [Neisseria meningitidis 92045]
Length = 503
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/441 (53%), Positives = 326/441 (73%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR MGK SF +QD SG +IQLY++N+ + + + DF ++D+GDI+GA+GTLFK
Sbjct: 75 MLKRQMGKASFATIQDVSG-----QIQLYLNNKGVSQEILDDFNHWDLGDIVGAEGTLFK 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GEL+++VS ++L++KSLRPLP+K + LS+QE KYR RY+DLI NE +R F KR+QI
Sbjct: 130 TNHGELTVRVSDIRLLSKSLRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQI 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I S+R+FM ++EVETP++H PGGA AKPF+THHN+L++ ++LRIAPELYLKRL++G
Sbjct: 190 IQSVRNFMVNERYLEVETPMMHPIPGGATAKPFVTHHNALDIPLYLRIAPELYLKRLVVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN++FRNEG+S RHNPEFTMIEFY A+++Y +M+ E +I+ GT
Sbjct: 250 GLERVFEINRSFRNEGMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTAN 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I Y G+ +D FE+LTI+EAIKKY P Y + L + +LK E+ K + +
Sbjct: 310 ITYNGKEVDLESPFERLTILEAIKKYNPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGS 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E KLWNPT+I +YP E+SPLAR S+ + +TERFELF++G E+A
Sbjct: 370 -----LQLALFEGCAEGKLWNPTFIIDYPVEVSPLARASDTK-QGLTERFELFVVGRELA 423
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RFK+Q+ K+ + E + +YD DYI A+E+G+PP GCGIG+DRL+
Sbjct: 424 NGYSELNDPEDQAERFKSQVAQKDAGDDE-AMHYDADYIRAMEFGLPPTGGCGIGIDRLV 482
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S+ IRDVILFP +R E
Sbjct: 483 MLLTDSQTIRDVILFPQMRPE 503
>gi|238023019|ref|ZP_04603445.1| hypothetical protein GCWU000324_02941 [Kingella oralis ATCC 51147]
gi|237865402|gb|EEP66542.1| hypothetical protein GCWU000324_02941 [Kingella oralis ATCC 51147]
Length = 527
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 234/441 (53%), Positives = 324/441 (73%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR MGK SF +QD +G +IQLY++N+ + + + F ++D+GDIIGA+G LFK
Sbjct: 99 MLKRQMGKASFATVQDATG-----QIQLYLNNKGVSQEVLDAFNHWDMGDIIGAEGVLFK 153
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GEL+++VS ++L++KSLRPLP+K + LS+QE KYR RY+DLI N ++R VF KR++I
Sbjct: 154 TNHGELTVRVSQIRLLSKSLRPLPDKHKGLSDQETKYRQRYVDLIANADSRDVFIKRSKI 213
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I ++R+FM ++EVETP++H PGGA AKPF+THHN+L++ ++LRIAPELYLKRL++G
Sbjct: 214 IQAVRNFMVSEQYLEVETPMMHPIPGGATAKPFVTHHNALDIPLYLRIAPELYLKRLVVG 273
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN++FRNEG+S RHNPEFTMIEFY A+ +Y +M+ E I+ G+ K
Sbjct: 274 GLERVFEINRSFRNEGMSVRHNPEFTMIEFYEAFCDYNRMMQMAEDTIRAACRSVSGSLK 333
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I+Y G+ +D FE+LTI++AIKKY P Y + L + +LK E+ K L +
Sbjct: 334 IEYNGKEVDLESPFERLTILQAIKKYNPHYTDEQLNDAEWLKKEIVKHGESLPHAAGLGS 393
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E+KLWNPT+I +YP E+SPLAR S+ +TERFELF++G E+A
Sbjct: 394 -----LQLALFEGCAESKLWNPTFIVDYPVEVSPLARASD-SQAGLTERFELFVVGRELA 447
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RFK Q+ K+ + E + +YD DYI A+EYG+PP GCGIG+DRL+
Sbjct: 448 NGYSELNDPEDQAARFKAQVAQKDAGDDE-AMHYDADYIRAMEYGLPPTGGCGIGIDRLV 506
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+++ IRDVILFP +R E
Sbjct: 507 MLLTDTQTIRDVILFPQMRPE 527
>gi|15677284|ref|NP_274437.1| lysyl-tRNA synthetase [Neisseria meningitidis MC58]
gi|385852954|ref|YP_005899468.1| lysyl-tRNA synthetase [Neisseria meningitidis H44/76]
gi|416196276|ref|ZP_11618046.1| lysyl-tRNA synthetase [Neisseria meningitidis CU385]
gi|427827508|ref|ZP_18994540.1| lysyl-tRNA synthetase [Neisseria meningitidis H44/76]
gi|433465370|ref|ZP_20422851.1| lysine--tRNA ligase [Neisseria meningitidis NM422]
gi|433488705|ref|ZP_20445864.1| lysine--tRNA ligase [Neisseria meningitidis M13255]
gi|433490752|ref|ZP_20447874.1| lysine--tRNA ligase [Neisseria meningitidis NM418]
gi|433505289|ref|ZP_20462227.1| lysine--tRNA ligase [Neisseria meningitidis 9506]
gi|433507427|ref|ZP_20464333.1| lysine--tRNA ligase [Neisseria meningitidis 9757]
gi|433511630|ref|ZP_20468454.1| lysine--tRNA ligase [Neisseria meningitidis 4119]
gi|32130177|sp|Q9JYU6.1|SYK_NEIMB RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|7226664|gb|AAF41786.1| lysyl-tRNA synthetase, heat inducible [Neisseria meningitidis MC58]
gi|316984545|gb|EFV63510.1| lysyl-tRNA synthetase [Neisseria meningitidis H44/76]
gi|325140370|gb|EGC62891.1| lysyl-tRNA synthetase [Neisseria meningitidis CU385]
gi|325199958|gb|ADY95413.1| lysyl-tRNA synthetase [Neisseria meningitidis H44/76]
gi|432202569|gb|ELK58628.1| lysine--tRNA ligase [Neisseria meningitidis NM422]
gi|432222664|gb|ELK78452.1| lysine--tRNA ligase [Neisseria meningitidis M13255]
gi|432226936|gb|ELK82654.1| lysine--tRNA ligase [Neisseria meningitidis NM418]
gi|432240581|gb|ELK96115.1| lysine--tRNA ligase [Neisseria meningitidis 9506]
gi|432240701|gb|ELK96234.1| lysine--tRNA ligase [Neisseria meningitidis 9757]
gi|432247026|gb|ELL02471.1| lysine--tRNA ligase [Neisseria meningitidis 4119]
Length = 503
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/441 (53%), Positives = 325/441 (73%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR MGK SF +QD SG +IQLY++N+ + + + DF ++D+GDI+GA+GTLFK
Sbjct: 75 MLKRQMGKASFATIQDVSG-----QIQLYLNNKGVSQEVLDDFNHWDLGDIVGAEGTLFK 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GEL+++VS ++L++KSLRPLP+K + LS+QE KYR RY+DLI NE +R F KR+QI
Sbjct: 130 TNHGELTVRVSGIRLLSKSLRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQI 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I S+R+FM ++EVETP++H PGGA AKPF+THHN+L++ ++LRIAPELYLKRL++G
Sbjct: 190 IQSVRNFMVGEHYLEVETPMMHPIPGGATAKPFVTHHNALDIPLYLRIAPELYLKRLVVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN++FRNEG+S RHNPEFTMIEFY A+++Y +M+ E +I+ GT
Sbjct: 250 GLERVFEINRSFRNEGMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTAN 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I Y G+ +D FE+LTI+EAIKKY P Y + L + +LK E+ K + +
Sbjct: 310 ITYNGKEVDLESPFERLTILEAIKKYNPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGS 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E KLWNPT+I +YP E+SPLAR S+ + +TERFELF++G E+A
Sbjct: 370 -----LQLALFEGCAEGKLWNPTFIVDYPVEVSPLARASDTK-QGLTERFELFVVGRELA 423
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RFK Q+ K+ + E + +YD DYI A+E+G+PP GCGIG+DRL+
Sbjct: 424 NGYSELNDPEDQAERFKAQVVQKDAGDDE-AMHYDADYIRAMEFGLPPTGGCGIGIDRLV 482
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S+ IRDVILFP +R E
Sbjct: 483 MLLTDSQTIRDVILFPQMRPE 503
>gi|121635115|ref|YP_975360.1| lysyl-tRNA synthetase [Neisseria meningitidis FAM18]
gi|416177823|ref|ZP_11610192.1| lysyl-tRNA synthetase [Neisseria meningitidis M6190]
gi|416191805|ref|ZP_11616233.1| lysyl-tRNA synthetase [Neisseria meningitidis ES14902]
gi|433492818|ref|ZP_20449909.1| lysine--tRNA ligase [Neisseria meningitidis NM586]
gi|433497117|ref|ZP_20454152.1| lysine--tRNA ligase [Neisseria meningitidis M7089]
gi|433499180|ref|ZP_20456187.1| lysine--tRNA ligase [Neisseria meningitidis M7124]
gi|433501152|ref|ZP_20458137.1| lysine--tRNA ligase [Neisseria meningitidis NM174]
gi|433503497|ref|ZP_20460454.1| lysine--tRNA ligase [Neisseria meningitidis NM126]
gi|166229812|sp|A1KUN1.1|SYK_NEIMF RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|120866821|emb|CAM10579.1| lysyl-tRNA synthetase [Neisseria meningitidis FAM18]
gi|325132393|gb|EGC55086.1| lysyl-tRNA synthetase [Neisseria meningitidis M6190]
gi|325138382|gb|EGC60950.1| lysyl-tRNA synthetase [Neisseria meningitidis ES14902]
gi|432227749|gb|ELK83455.1| lysine--tRNA ligase [Neisseria meningitidis NM586]
gi|432233202|gb|ELK88834.1| lysine--tRNA ligase [Neisseria meningitidis M7089]
gi|432233607|gb|ELK89233.1| lysine--tRNA ligase [Neisseria meningitidis M7124]
gi|432235125|gb|ELK90742.1| lysine--tRNA ligase [Neisseria meningitidis NM174]
gi|432239292|gb|ELK94849.1| lysine--tRNA ligase [Neisseria meningitidis NM126]
Length = 503
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/441 (53%), Positives = 325/441 (73%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR MGK SF +QD SG +IQLY++N+ + + + DF ++D+GDI+GA+GTLFK
Sbjct: 75 MLKRQMGKASFATIQDVSG-----QIQLYLNNKGVSQEVLDDFNHWDLGDIVGAEGTLFK 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GEL+++VS ++L++KSLRPLP+K + LS+QE KYR RY+DLI NE +R F KR+QI
Sbjct: 130 TNHGELTVRVSDIRLLSKSLRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQI 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I S+R+FM ++EVETP++H PGGA AKPF+THHN+L++ ++LRIAPELYLKRL++G
Sbjct: 190 IQSVRNFMVGEHYLEVETPMMHPIPGGATAKPFVTHHNALDIPLYLRIAPELYLKRLVVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN++FRNEG+S RHNPEFTMIEFY A+++Y +M+ E +I+ GT
Sbjct: 250 GLERVFEINRSFRNEGMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTAN 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I Y G+ +D FE+LTI+EAIKKY P Y + L + +LK E+ K + +
Sbjct: 310 ITYNGKEVDLESPFERLTILEAIKKYNPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGS 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E KLWNPT+I +YP E+SPLAR S+ + +TERFELF++G E+A
Sbjct: 370 -----LQLALFEGCAEGKLWNPTFIIDYPVEVSPLARASDTK-QGLTERFELFVVGRELA 423
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RFK Q+ K+ + E + +YD DYI A+E+G+PP GCGIG+DRL+
Sbjct: 424 NGYSELNDPEDQAERFKAQVAQKDAGDDE-AMHYDADYIRAMEFGLPPTGGCGIGIDRLV 482
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S+ IRDVILFP +R E
Sbjct: 483 MLLTDSQTIRDVILFPQMRPE 503
>gi|451822970|ref|YP_007459244.1| class II lysyl-tRNA synthetase [Candidatus Kinetoplastibacterium
desouzaii TCC079E]
gi|451775770|gb|AGF46811.1| class II lysyl-tRNA synthetase [Candidatus Kinetoplastibacterium
desouzaii TCC079E]
Length = 506
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 253/444 (56%), Positives = 328/444 (73%), Gaps = 13/444 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR+MG SFI +QD + +IQ+Y+ + + +Y +FK +DIGDI+ +GT+FK
Sbjct: 73 MLKRIMGSASFINIQDDTD-----RIQVYLDKKKLDVIMYDNFKQFDIGDIVAIEGTIFK 127
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN ELSI SS+ L++KS+RPLP+KF +S+ IKYR RY+D+I+++ TR F+ R++I
Sbjct: 128 TNKEELSIYASSINLLSKSIRPLPDKFHGISDHNIKYRQRYLDIIMSKETRDTFQTRSKI 187
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
IS IR++M ++FMEVETP+LH PGGA AKPF+THHN+LNM M+LRIAPELYLKRLI+G
Sbjct: 188 ISYIRNYMSDSNFMEVETPMLHPIPGGAAAKPFVTHHNALNMDMYLRIAPELYLKRLIVG 247
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FE+N+NFRNEG+SP+HNPEFTM+EFYAAYT+Y WLM FTEK+IK+ +
Sbjct: 248 GFERVFELNRNFRNEGVSPKHNPEFTMMEFYAAYTDYNWLMTFTEKLIKETVSITHKKDI 307
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I +Q + LDFSK FE+L + +AI KY Y++ L + FL +E+ KIN K L N
Sbjct: 308 IPFQNQYLDFSKKFEQLDMCDAICKYNHIYDKSKLNDHNFLCNEVIKINNKLK----LEN 363
Query: 301 LKKDI---LQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
+K LQL LFEETTE K+WNPTYI NYP E SPLAR + E I ERFELFI G
Sbjct: 364 IKDSSIGQLQLYLFEETTEEKIWNPTYIINYPKETSPLARTKDQE-PEIAERFELFIAGR 422
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EIANGFSELNDPEEQ R +Q++ KN E + ++D DY+ +LEYGMPP GCGIG+D
Sbjct: 423 EIANGFSELNDPEEQFKRLSDQVNKKNISPDEENLFFDLDYVKSLEYGMPPTGGCGIGID 482
Query: 418 RLIMLLTNSKNIRDVILFPHLRNE 441
RL+M+LTN NIRD+ILFPH+R E
Sbjct: 483 RLLMILTNKSNIRDIILFPHMRPE 506
>gi|331000231|ref|ZP_08323915.1| lysine--tRNA ligase [Parasutterella excrementihominis YIT 11859]
gi|329572397|gb|EGG54050.1| lysine--tRNA ligase [Parasutterella excrementihominis YIT 11859]
Length = 511
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 242/442 (54%), Positives = 319/442 (72%), Gaps = 13/442 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKN-YDIGDIIGAKGTLF 59
MLKRVMGK SF+ ++D G D IQ +I+ +G Y FK DIGDI+GA GTLF
Sbjct: 81 MLKRVMGKASFLTVKD--GTDH---IQFFITKAEVGDETYDFFKKMVDIGDIVGATGTLF 135
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
T TGELS++V + +L+TK++RPLP+KF LS+ E +YR RY+DLI+NE+TR+ F R++
Sbjct: 136 FTKTGELSVRVKNFRLLTKNIRPLPDKFHGLSDPETRYRQRYVDLIMNESTRRTFMIRSK 195
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+ R FM ++ FMEVETP+LH PGGA AKPFITHHN+L+M M+LRIAPELYLKRL++
Sbjct: 196 AIAETRKFMMEHHFMEVETPMLHPIPGGANAKPFITHHNALDMDMYLRIAPELYLKRLVV 255
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N++FRNEG+ RHNPEFTM+EFYAAY Y WLM +TEK+++ + IGT
Sbjct: 256 GGFERVFELNRSFRNEGVDVRHNPEFTMMEFYAAYKEYHWLMDYTEKLLRTVAEKTIGTA 315
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
I YQG +D +K F++LT EA+ KY PQY L++K F++ ELK++ +
Sbjct: 316 VIQYQGHTIDLTKPFDRLTAKEAVLKYAPQYTPEQLEDKDFMQEELKRLGEPAKADAGVG 375
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
LQ+ +FE E+KL PTYI +YP EISPLAR S+ + ITERFELF+ G E
Sbjct: 376 -----ALQMAIFEAVAESKLIQPTYIIDYPVEISPLARASD-KVPGITERFELFMAGRET 429
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
ANGFSELNDP++Q+ RF Q LK + E + YYD DY+ ALEYG+PP GCG+G+DR
Sbjct: 430 ANGFSELNDPQDQAARFMAQAKLKASGDDE-AMYYDADYVRALEYGLPPTGGCGVGLDRF 488
Query: 420 IMLLTNSKNIRDVILFPHLRNE 441
+MLLT+S +IRDV+LFPH+R E
Sbjct: 489 VMLLTDSPSIRDVLLFPHMRPE 510
>gi|261378958|ref|ZP_05983531.1| lysine--tRNA ligase [Neisseria cinerea ATCC 14685]
gi|269144660|gb|EEZ71078.1| lysine--tRNA ligase [Neisseria cinerea ATCC 14685]
Length = 503
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 237/441 (53%), Positives = 326/441 (73%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR MGK SF +QD +G +IQLY++N+ + + + DF ++D+GDI+GA+GTLFK
Sbjct: 75 MLKRQMGKASFATIQDVTG-----QIQLYLNNKGVSQEVLDDFNHWDLGDIVGAEGTLFK 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GEL+++VS ++L++KSLRPLP+K + LS+QE KYR RY+DLI NE +R F KR+QI
Sbjct: 130 TNHGELTVRVSDIRLLSKSLRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQI 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I S+R+FM ++EVETP++H PGGA AKPF+THHN+L++ ++LRIAPELYLKRL++G
Sbjct: 190 IQSVRNFMVNEHYLEVETPMMHPIPGGATAKPFVTHHNALDIPLYLRIAPELYLKRLVVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN++FRNEG+S RHNPEFTMIEFY A+++Y +M+ E +I+ GT K
Sbjct: 250 GLERVFEINRSFRNEGMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRAVNGTAK 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I Y G+ +D FE+LTI+ AIKKY P Y + L ++ +LK E+ K + +
Sbjct: 310 ISYNGKEVDLESPFERLTILGAIKKYNPHYTDEQLNDEEWLKKEIVKHGESLPPSPGIGS 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E KLWNPT+I +YP E+SPLAR S+ + +TERFELF++G E+A
Sbjct: 370 -----LQLALFEGCAEGKLWNPTFIVDYPVEVSPLARASDTK-QGLTERFELFVVGRELA 423
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RFK Q+ K+ + E + +YD DYI A+E+G+PP GCGIG+DRL+
Sbjct: 424 NGYSELNDPEDQAERFKAQVAQKDAGDDE-AMHYDADYIRAMEFGLPPTGGCGIGIDRLV 482
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S+ IRDVILFP +R E
Sbjct: 483 MLLTDSQTIRDVILFPQMRPE 503
>gi|421551039|ref|ZP_15997039.1| lysine--tRNA ligase [Neisseria meningitidis 69166]
gi|433471700|ref|ZP_20429084.1| lysine--tRNA ligase [Neisseria meningitidis 68094]
gi|433477865|ref|ZP_20435185.1| lysine--tRNA ligase [Neisseria meningitidis 70012]
gi|402328573|gb|EJU63940.1| lysine--tRNA ligase [Neisseria meningitidis 69166]
gi|432207940|gb|ELK63925.1| lysine--tRNA ligase [Neisseria meningitidis 68094]
gi|432215530|gb|ELK71419.1| lysine--tRNA ligase [Neisseria meningitidis 70012]
Length = 503
Score = 510 bits (1313), Expect = e-142, Method: Compositional matrix adjust.
Identities = 237/441 (53%), Positives = 326/441 (73%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR MGK SF +QD SG +IQLY++N+ + + + DF ++D+GDI+GA+GTLFK
Sbjct: 75 MLKRQMGKASFATIQDVSG-----QIQLYLNNKGVSQEVLDDFNHWDLGDIVGAEGTLFK 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GEL+++VS ++L++KSLRPLP+K + LS+QE KYR RY+DLI N +R F KR+QI
Sbjct: 130 TNHGELTVRVSDIRLLSKSLRPLPDKHKGLSDQETKYRQRYVDLIANGESRNTFIKRSQI 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I S+R+FM ++EVETP++H PGGA AKPF+THHN+L++ ++LRIAPELYLKRL++G
Sbjct: 190 IQSVRNFMVGEHYLEVETPMMHPIPGGATAKPFVTHHNALDIPLYLRIAPELYLKRLVVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN++FRNEG+S RHNPEFTMIEFY A+++Y +M+ E +I+ GT
Sbjct: 250 GLERVFEINRSFRNEGMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTAN 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I Y G+ +D FE+LTI+EAIKKY P Y + L + +LK E+ K ++ +
Sbjct: 310 ITYNGKEVDLESPFERLTILEAIKKYNPHYTDEQLNDAEWLKKEIVKHGESLPPSLVIGS 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E KLWNPT+I +YP E+SPLAR S+ + +TERFELF++G E+A
Sbjct: 370 -----LQLALFEGCAEGKLWNPTFIIDYPVEVSPLARASDTK-QGLTERFELFVVGRELA 423
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RFK+Q+ K+ + E + +YD DYI A+E+G+PP GCGIG+DRL+
Sbjct: 424 NGYSELNDPEDQAERFKSQVAQKDAGDDE-AMHYDADYIRAMEFGLPPTGGCGIGIDRLV 482
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S+ IRDVILFP +R E
Sbjct: 483 MLLTDSQTIRDVILFPQMRPE 503
>gi|417957364|ref|ZP_12600287.1| lysine--tRNA ligase [Neisseria weaveri ATCC 51223]
gi|343968371|gb|EGV36600.1| lysine--tRNA ligase [Neisseria weaveri ATCC 51223]
Length = 506
Score = 510 bits (1313), Expect = e-142, Method: Compositional matrix adjust.
Identities = 235/441 (53%), Positives = 329/441 (74%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
ML+R MGK SF +QD SG +IQ+Y++N+ +G++++ FK++D+GDIIG +GTLFK
Sbjct: 78 MLQRAMGKASFATIQDVSG-----QIQVYVNNQGVGEDVHNAFKHWDLGDIIGVEGTLFK 132
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GEL+++ S L L+TKSLRPLP+K + L++QE KYR RY DLI N+++R F KR++I
Sbjct: 133 TNHGELTVRASKLHLLTKSLRPLPDKHKGLTDQEQKYRQRYADLITNQDSRDTFIKRSKI 192
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I ++R++M ++EVETP++H PGGA AKPF+THHN+L+M ++LRIAPELYLKRL++G
Sbjct: 193 IQAVRNYMVNERYLEVETPMMHPIPGGATAKPFVTHHNALDMPLYLRIAPELYLKRLVVG 252
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN++FRNEG+S RHNPEFTM+EFY A+ Y +M+ TE +I+ + GT K
Sbjct: 253 GLERVFEINRSFRNEGMSTRHNPEFTMMEFYEAFCTYERMMEMTEGVIRHAAKEVCGTAK 312
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ Y G+ +D FE+LTI+EAIKKY P Y + L + +LK E+ K + +KI +
Sbjct: 313 VSYNGKEVDLESPFERLTILEAIKKYNPHYTDEQLNDAEWLKKEIVK-----HGEKIPPS 367
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E+KLWNPT+I +YP E+SPLAR S+ + +T+RFELFI+G E+A
Sbjct: 368 PGIGSLQLALFEGCAESKLWNPTFIIDYPVEVSPLARASDTK-PGLTDRFELFIVGRELA 426
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RFK Q+ K+ + E + +YD DYI A+EYG+PP G GIG+DRL+
Sbjct: 427 NGYSELNDPEDQAARFKAQVAQKDAGDDE-AMHYDADYIRAMEYGLPPTGGSGIGLDRLV 485
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT++ +IRDVILFP +R E
Sbjct: 486 MLLTDAPSIRDVILFPQMRPE 506
>gi|114330878|ref|YP_747100.1| lysyl-tRNA synthetase [Nitrosomonas eutropha C91]
gi|114307892|gb|ABI59135.1| lysyl-tRNA synthetase [Nitrosomonas eutropha C91]
Length = 532
Score = 510 bits (1313), Expect = e-142, Method: Compositional matrix adjust.
Identities = 245/442 (55%), Positives = 327/442 (73%), Gaps = 12/442 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
+ KRVMGK SF +QD SG +IQLYISN+ G++ + F++YD+GDI+GA+G LFK
Sbjct: 103 LFKRVMGKASFATIQDMSG-----RIQLYISNDHTGESAHEAFRHYDLGDILGAEGILFK 157
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T T ELS++V+ L+L+TKSLRPLP KF L +QE KYR RY+DLI NE TRKVF R++I
Sbjct: 158 TRTDELSLRVTRLRLLTKSLRPLPEKFHGLIDQEQKYRRRYLDLITNEETRKVFLVRSKI 217
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I ++R F+ ++EVETP++H+ PGGA A+PFITHHN+L+M ++LRIAPELYLKRL++G
Sbjct: 218 IQAVREFLVNRGYLEVETPMMHSIPGGATARPFITHHNALDMSLYLRIAPELYLKRLVVG 277
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G K+FEIN+NFRNEGIS RHNPEFTM+EFY AY ++ +LM TE M++++ + +GTT+
Sbjct: 278 GMEKVFEINRNFRNEGISTRHNPEFTMLEFYEAYQDHHYLMDLTESMLREVALKVLGTTR 337
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQ R +D ++ F +LT+++AI KY P+ +E L N+ L L+ FN +
Sbjct: 338 IVYQQREMDLARPFARLTVMQAILKYHPENSEAQLNNRDDLIKILQAKGIGFNPDSGIGG 397
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LF+ETTE L+ P +I +YP E+SPLAR+ N +N IT+RFEL+I G EIA
Sbjct: 398 -----LQLALFDETTEHLLFEPVFIVDYPAEVSPLARR-NDQNPEITDRFELYIAGREIA 451
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF Q K + E + +YD DYI ALEYG+PP +G GIG+DRL+
Sbjct: 452 NGFSELNDPEDQASRFLEQARAKEAGDME-AMHYDADYIQALEYGLPPTAGEGIGIDRLV 510
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S +IRDVILFP LR E+
Sbjct: 511 MLLTDSPSIRDVILFPQLRKED 532
>gi|421549084|ref|ZP_15995106.1| lysine--tRNA ligase [Neisseria meningitidis NM2781]
gi|433469631|ref|ZP_20427049.1| lysine--tRNA ligase [Neisseria meningitidis 98080]
gi|402324905|gb|EJU60327.1| lysine--tRNA ligase [Neisseria meningitidis NM2781]
gi|432202800|gb|ELK58857.1| lysine--tRNA ligase [Neisseria meningitidis 98080]
Length = 503
Score = 510 bits (1313), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/441 (53%), Positives = 324/441 (73%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR MGK SF +QD SG +IQLY++N+ + + + DF ++D+GDI+GA+GTLFK
Sbjct: 75 MLKRQMGKASFATIQDVSG-----QIQLYLNNKGVSQEVLDDFNHWDLGDIVGAEGTLFK 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GEL+++VS ++L++KSLRPLP+K + LS+QE KYR RY+DLI NE +R F KR+QI
Sbjct: 130 TNHGELTVRVSDIRLLSKSLRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQI 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I S+R+FM ++EVETP++H PGGA AKPF+THHN+L++ ++LRIAPELYLKRL++G
Sbjct: 190 IQSVRNFMVGEHYLEVETPMMHPIPGGATAKPFVTHHNALDIPLYLRIAPELYLKRLVVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN++FRNEG+S RHNPEFTMIEFY A+++Y +M+ E +I+ GT
Sbjct: 250 GLERVFEINRSFRNEGMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTAN 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I Y G+ +D FE+LTI+EAIKKY P Y + L + +LK E+ K + +
Sbjct: 310 ITYNGKEVDLESPFERLTILEAIKKYNPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGS 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E KLWNPT+I +YP E+SPLAR S+ +TERFELF++G E+A
Sbjct: 370 -----LQLALFEGCAEGKLWNPTFIIDYPVEVSPLARASD-SKPGLTERFELFVVGRELA 423
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RFK Q+ K+ + E + +YD DYI A+E+G+PP GCGIG+DRL+
Sbjct: 424 NGYSELNDPEDQAERFKAQVAQKDAGDDE-AMHYDADYIRAMEFGLPPTGGCGIGIDRLV 482
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S+ IRDVILFP +R E
Sbjct: 483 MLLTDSQTIRDVILFPQMRPE 503
>gi|433509542|ref|ZP_20466411.1| lysine--tRNA ligase [Neisseria meningitidis 12888]
gi|432246930|gb|ELL02376.1| lysine--tRNA ligase [Neisseria meningitidis 12888]
Length = 503
Score = 509 bits (1311), Expect = e-142, Method: Compositional matrix adjust.
Identities = 237/441 (53%), Positives = 325/441 (73%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR MGK SF +QD SG +IQLY++N+ + + + DF ++D+GDI+GA+GTLFK
Sbjct: 75 MLKRQMGKASFATIQDVSG-----QIQLYLNNKGVSQEVLDDFNHWDLGDIVGAEGTLFK 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GEL+++VS ++L++KSLRPLP+K + LS+QE KYR RY+DLI NE +R F KR+QI
Sbjct: 130 TNHGELTVRVSGIRLLSKSLRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQI 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I S+R+FM ++EVETP++H PGGA AKPF+THHN+L++ ++LRIAPELYLKRL++G
Sbjct: 190 IQSVRNFMVGEHYLEVETPMMHPIPGGATAKPFVTHHNALDIPLYLRIAPELYLKRLVVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN++FRNEG+S RHNPEFTMIEFY A+++Y +M+ E +I+ GT
Sbjct: 250 GLERVFEINRSFRNEGMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTAN 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I Y G+ +D FE+LTI+EAIKKY P Y + L + +LK E+ K + +
Sbjct: 310 ITYNGKEVDLESPFERLTILEAIKKYNPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGS 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E KLWNPT+I +YP E+SPLAR S+ + +TERFELF++G E+A
Sbjct: 370 -----LQLALFEGCAEGKLWNPTFIVDYPVEVSPLARASDTK-QGLTERFELFVVGRELA 423
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RFK Q+ K+ + E + +YD DYI ++E+G+PP GCGIG+DRL+
Sbjct: 424 NGYSELNDPEDQAERFKAQVVQKDAGDDE-AMHYDADYIRSMEFGLPPTGGCGIGIDRLV 482
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S+ IRDVILFP +R E
Sbjct: 483 MLLTDSQTIRDVILFPQMRPE 503
>gi|398803894|ref|ZP_10562900.1| lysyl-tRNA synthetase (class II) [Polaromonas sp. CF318]
gi|398095320|gb|EJL85659.1| lysyl-tRNA synthetase (class II) [Polaromonas sp. CF318]
Length = 515
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 246/444 (55%), Positives = 324/444 (72%), Gaps = 12/444 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF LQD S G+IQ++++ + IG+ LY FK++D+GDI+ A+G +FK
Sbjct: 82 MLKRVMGKASFATLQD-----STGRIQIFLTRDEIGEELYAAFKHWDLGDIVAAEGKVFK 136
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELSI +S++L+TKSLRPLP F +++QE KYR RY+DLI +E RK F R++
Sbjct: 137 TKTGELSIHATSVRLLTKSLRPLPGDFYGMADQEQKYRQRYVDLITDEQARKRFTARSKA 196
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+SSIR FM K+DF+EVETP+LH PGGA AKPF THHN+L+ +MFLRIAPELYLKRLI+G
Sbjct: 197 VSSIREFMVKHDFLEVETPMLHPIPGGANAKPFKTHHNALDQEMFLRIAPELYLKRLIVG 256
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF+++FEIN+++RNEGIS RHNPEFTM+EFYAAY +Y LM FTE +I+ +GT +
Sbjct: 257 GFDRVFEINRSYRNEGISVRHNPEFTMMEFYAAYWDYNDLMDFTEALIRDAAQKAVGTLQ 316
Query: 241 IDYQGR--LLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
+ Y G+ +D +K FE+LTI EAI K+T +D + +L + LKK+ +K L
Sbjct: 317 LSYGGKEEKVDLAKPFERLTIREAILKHTEAGEHVD--DAAWLTNALKKLGMN-EEKDRL 373
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
+ LQ++ FEE E KLW PT+I +PTEISPLAR +N +TERFEL+I G E
Sbjct: 374 STRSLASLQVLYFEELVEEKLWQPTFIMEHPTEISPLAR-ANDSRPEVTERFELYITGRE 432
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
NGFSELND EEQ+ RF Q+ K+ + E + +YD D++ ALEYGMPP GCG+G+DR
Sbjct: 433 FGNGFSELNDAEEQAARFNAQVAAKDSGDDE-AMFYDHDFVRALEYGMPPTGGCGVGIDR 491
Query: 419 LIMLLTNSKNIRDVILFPHLRNEN 442
L+MLLT+S +IRDVILFP LR E+
Sbjct: 492 LMMLLTDSASIRDVILFPALRRES 515
>gi|385323925|ref|YP_005878364.1| lysyl-tRNA synthetase (lysine--tRNA ligase; LysRS) [Neisseria
meningitidis 8013]
gi|421542721|ref|ZP_15988827.1| lysine--tRNA ligase [Neisseria meningitidis NM255]
gi|421544747|ref|ZP_15990820.1| lysine--tRNA ligase [Neisseria meningitidis NM140]
gi|421546832|ref|ZP_15992875.1| lysine--tRNA ligase [Neisseria meningitidis NM183]
gi|421553044|ref|ZP_15999014.1| lysine--tRNA ligase [Neisseria meningitidis NM576]
gi|433522144|ref|ZP_20478832.1| lysine--tRNA ligase [Neisseria meningitidis 61103]
gi|433526198|ref|ZP_20482828.1| lysine--tRNA ligase [Neisseria meningitidis 69096]
gi|433539200|ref|ZP_20495675.1| lysine--tRNA ligase [Neisseria meningitidis 70030]
gi|261392312|emb|CAX49838.1| lysyl-tRNA synthetase (lysine--tRNA ligase; LysRS) [Neisseria
meningitidis 8013]
gi|402316640|gb|EJU52182.1| lysine--tRNA ligase [Neisseria meningitidis NM255]
gi|402322521|gb|EJU57978.1| lysine--tRNA ligase [Neisseria meningitidis NM183]
gi|402322660|gb|EJU58111.1| lysine--tRNA ligase [Neisseria meningitidis NM140]
gi|402329617|gb|EJU64974.1| lysine--tRNA ligase [Neisseria meningitidis NM576]
gi|432258996|gb|ELL14275.1| lysine--tRNA ligase [Neisseria meningitidis 61103]
gi|432260962|gb|ELL16219.1| lysine--tRNA ligase [Neisseria meningitidis 69096]
gi|432272923|gb|ELL28025.1| lysine--tRNA ligase [Neisseria meningitidis 70030]
Length = 503
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 237/441 (53%), Positives = 324/441 (73%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR MGK SF +QD SG +IQLY++N+ + + + DF ++D+GDI+GA+GTLFK
Sbjct: 75 MLKRQMGKASFATIQDVSG-----QIQLYLNNKGVSQEVLDDFNHWDLGDIVGAEGTLFK 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GEL+++VS ++L++KSLRPLP+K + LS+QE KYR RY+DLI NE +R F KR+QI
Sbjct: 130 TNQGELTVRVSGIRLLSKSLRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQI 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I S+R+FM ++EVETP++H PGGA AKPF+THHN+L++ ++LRIAPELYLKRL++G
Sbjct: 190 IQSVRNFMVGEHYLEVETPMMHPIPGGATAKPFVTHHNALDIPLYLRIAPELYLKRLVVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN++FRNEG+S RHNPEFTMIEFY A+++Y +M+ E +I+ GT
Sbjct: 250 GLERVFEINRSFRNEGMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRAVNGTAN 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I Y G+ +D FE+LTI++AIKKY P Y + L + +LK E+ K + +
Sbjct: 310 ITYNGKEVDLESPFERLTILDAIKKYNPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGS 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E KLWNPT+I +YP E+SPLAR S+ +TERFELF++G E+A
Sbjct: 370 -----LQLALFEGCAEGKLWNPTFIIDYPVEVSPLARASD-SKPGLTERFELFVVGRELA 423
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RFK Q+ K+ + E + +YD DYI A+E+G+PP GCGIG+DRL+
Sbjct: 424 NGYSELNDPEDQAERFKAQVAQKDAGDDE-AMHYDADYIRAMEFGLPPTGGCGIGIDRLV 482
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S+ IRDVILFP +R E
Sbjct: 483 MLLTDSQTIRDVILFPQMRPE 503
>gi|374261270|ref|ZP_09619854.1| lysine tRNA synthetase, heat inducible [Legionella drancourtii
LLAP12]
gi|363538165|gb|EHL31575.1| lysine tRNA synthetase, heat inducible [Legionella drancourtii
LLAP12]
Length = 497
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 240/442 (54%), Positives = 334/442 (75%), Gaps = 17/442 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYI-SNEIIGKNLYTDFKNYDIGDIIGAKGTLF 59
+L+R+MGK SF +QD SG +IQ+YI +N++ LY FK++D+GDI+G G LF
Sbjct: 71 VLRRIMGKASFFHIQDVSG-----RIQIYIRANDL--PELYEQFKHWDLGDIVGVSGELF 123
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KTNTGEL++ ++L+TKSLRPLP+KF L++QE+KYR RY+DLI NE++R F R++
Sbjct: 124 KTNTGELTLNAEHIELLTKSLRPLPDKFHGLADQEVKYRKRYVDLIANEDSRTTFLIRSR 183
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+I + R FM+KN F+EVETP++H PGGA+A+PFITHHNSL+M M+LRIAPELYLKRL++
Sbjct: 184 LIQAFRQFMDKNQFLEVETPMMHPIPGGAVARPFITHHNSLDMTMYLRIAPELYLKRLVV 243
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF +++EIN+NFRNEGIS RHNPEFTM+EFY AY +Y LM FTE++++ + +GT
Sbjct: 244 GGFERVYEINRNFRNEGISTRHNPEFTMVEFYQAYADYNDLMTFTEQLLQYLCDVVLGTR 303
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+++YQG+ +DF++ F ++T+ EAI Y PQ + L++ + L++ F + L
Sbjct: 304 QVEYQGQSIDFNQPFTRMTVKEAILHYHPQISAQQLESVAVCRQILQEKGFAFKETDGLG 363
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
LQ++LFEET E +L+ PT+IT YPTEISPLAR+S+ + +T+RFE FI G EI
Sbjct: 364 K-----LQMILFEETVEHQLFQPTFITAYPTEISPLARRSD-SDPEVTDRFEFFIAGREI 417
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSS-YYDTDYIHALEYGMPPASGCGIGVDR 418
ANGFSELND E+Q+ RF+ Q++ K+ G+L + +YD+DYI ALEYG+PP +G GIG+DR
Sbjct: 418 ANGFSELNDAEDQAERFRKQVEEKD--AGDLEAMHYDSDYIEALEYGLPPTAGEGIGIDR 475
Query: 419 LIMLLTNSKNIRDVILFPHLRN 440
L+ML TNS++IRDVILFPHLR
Sbjct: 476 LVMLFTNSQSIRDVILFPHLRQ 497
>gi|421540679|ref|ZP_15986822.1| lysine--tRNA ligase [Neisseria meningitidis 93004]
gi|402318548|gb|EJU54069.1| lysine--tRNA ligase [Neisseria meningitidis 93004]
Length = 503
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 237/441 (53%), Positives = 324/441 (73%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR MGK SF +QD SG +IQLY++N+ + + + DF ++D+GDI+GA+GTLFK
Sbjct: 75 MLKRQMGKASFATIQDVSG-----QIQLYLNNKGVSQEVLDDFNHWDLGDIVGAEGTLFK 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GEL+++VS ++L++KSLRPLP+K + LS+QE KYR RY+DLI N +R F KR+QI
Sbjct: 130 TNHGELTVRVSGIRLLSKSLRPLPDKHKGLSDQETKYRQRYVDLIANGESRNTFIKRSQI 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I S+R+FM ++EVETP++H PGGA AKPF+THHN+L++ ++LRIAPELYLKRL++G
Sbjct: 190 IQSVRNFMVGEHYLEVETPMMHPIPGGATAKPFVTHHNALDIPLYLRIAPELYLKRLVVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN++FRNEG+S RHNPEFTMIEFY A+++Y +M+ E +I+ GT
Sbjct: 250 GLERVFEINRSFRNEGMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTAN 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I Y G+ +D FE+LTI+EAIKKY P Y + L + +LK E+ K + +
Sbjct: 310 ITYNGKEVDLESPFERLTILEAIKKYNPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGS 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E KLWNPT+I +YP E+SPLAR S+ + +TERFELF++G E+A
Sbjct: 370 -----LQLALFEGCAEGKLWNPTFIVDYPVEVSPLARASDTK-QGLTERFELFVVGRELA 423
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RFK Q+ K+ + E + +YD DYI A+E+G+PP GCGIG+DRL+
Sbjct: 424 NGYSELNDPEDQAERFKAQVAQKDAGDDE-AMHYDADYIRAMEFGLPPTGGCGIGIDRLV 482
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S+ IRDVILFP +R E
Sbjct: 483 MLLTDSQTIRDVILFPQMRPE 503
>gi|385340316|ref|YP_005894188.1| lysyl-tRNA synthetase [Neisseria meningitidis G2136]
gi|418288604|ref|ZP_12901069.1| lysyl-tRNA synthetase [Neisseria meningitidis NM233]
gi|418290854|ref|ZP_12902954.1| lysyl-tRNA synthetase [Neisseria meningitidis NM220]
gi|325198560|gb|ADY94016.1| lysyl-tRNA synthetase [Neisseria meningitidis G2136]
gi|372200872|gb|EHP14873.1| lysyl-tRNA synthetase [Neisseria meningitidis NM220]
gi|372201549|gb|EHP15463.1| lysyl-tRNA synthetase [Neisseria meningitidis NM233]
Length = 503
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 237/441 (53%), Positives = 325/441 (73%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR MGK SF +QD SG +IQLY++N+ + + + DF ++D+GDI+GA+GTLFK
Sbjct: 75 MLKRQMGKASFATIQDVSG-----QIQLYLNNKGVSQEILDDFNHWDLGDIVGAEGTLFK 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GEL+++VS ++L++KSLRPLP+K + LS+QE KYR RY+DLI N +R F KR+QI
Sbjct: 130 TNHGELTVRVSGIRLLSKSLRPLPDKHKGLSDQETKYRQRYVDLIANGESRNTFIKRSQI 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I S+R+FM ++EVETP++H PGGA AKPF+THHN+L++ ++LRIAPELYLKRL++G
Sbjct: 190 IQSVRNFMVGEHYLEVETPMMHPIPGGATAKPFVTHHNALDIPLYLRIAPELYLKRLVVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN++FRNEG+S RHNPEFTMIEFY A+++Y +M+ E +I+ GT
Sbjct: 250 GLERVFEINRSFRNEGMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTAN 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I Y G+ +D FE+LTI+EAIKKY P Y + L + +LK E+ K + +
Sbjct: 310 ITYNGKEVDLESPFERLTILEAIKKYNPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGS 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E KLWNPT+I +YP E+SPLAR S+ + +TERFELF++G E+A
Sbjct: 370 -----LQLALFEGCAEGKLWNPTFIIDYPVEVSPLARASDTK-QGLTERFELFVVGRELA 423
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RFK+Q+ K+ + E + +YD DYI A+E+G+PP GCGIG+DRL+
Sbjct: 424 NGYSELNDPEDQAERFKSQVAQKDAGDDE-AMHYDADYIRAMEFGLPPTGGCGIGIDRLV 482
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S+ IRDVILFP +R E
Sbjct: 483 MLLTDSQTIRDVILFPQMRPE 503
>gi|59801795|ref|YP_208507.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
gi|240014706|ref|ZP_04721619.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae DGI18]
gi|240017153|ref|ZP_04723693.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae FA6140]
gi|240121228|ref|ZP_04734190.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae PID24-1]
gi|254494246|ref|ZP_05107417.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
gi|268595341|ref|ZP_06129508.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
gi|268597319|ref|ZP_06131486.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
gi|268599493|ref|ZP_06133660.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
gi|268601895|ref|ZP_06136062.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
gi|268604225|ref|ZP_06138392.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
gi|268682686|ref|ZP_06149548.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
gi|268684904|ref|ZP_06151766.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
gi|268687112|ref|ZP_06153974.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
gi|291043238|ref|ZP_06568961.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
gi|293398557|ref|ZP_06642735.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae F62]
gi|385336232|ref|YP_005890179.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae TCDC-NG08107]
gi|75355660|sp|Q5F6U2.1|SYK_NEIG1 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|59718690|gb|AAW90095.1| putative lysyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
gi|226513286|gb|EEH62631.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
gi|268548730|gb|EEZ44148.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
gi|268551107|gb|EEZ46126.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
gi|268583624|gb|EEZ48300.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
gi|268586026|gb|EEZ50702.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
gi|268588356|gb|EEZ53032.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
gi|268622970|gb|EEZ55370.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
gi|268625188|gb|EEZ57588.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
gi|268627396|gb|EEZ59796.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
gi|291012844|gb|EFE04827.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
gi|291611028|gb|EFF40125.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae F62]
gi|317164775|gb|ADV08316.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae TCDC-NG08107]
Length = 503
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 236/441 (53%), Positives = 325/441 (73%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR MGK SF +QD +G +IQLY++N+ + + + DF ++D+GDI+GA+GTLFK
Sbjct: 75 MLKRQMGKASFATIQDVTG-----QIQLYLNNKGVSQEVLDDFNHWDLGDIVGAEGTLFK 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GEL+++VS ++L++KSLRPLP+K + LS+QE KYR RY+DLI NE +R F KR+QI
Sbjct: 130 TNHGELTVRVSDIRLLSKSLRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQI 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I S+R+FM ++EVETP++H PGGA AKPF+THHN+L++ ++LRIAPELYLKRL++G
Sbjct: 190 IQSVRNFMVGEHYLEVETPMMHPIPGGATAKPFVTHHNALDIPLYLRIAPELYLKRLVVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN++FRNEG+S RHNPEFTMIEFY A+++Y +M+ E +I+ GT
Sbjct: 250 GLERVFEINRSFRNEGMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTAN 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I Y G+ +D FE+LTI+EAIKKY P Y + L + +LK E+ K + +
Sbjct: 310 ITYNGKEVDLESPFERLTILEAIKKYNPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGS 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E KLWNPT+I +YP E+SPLAR S+ + +TERFELF++G E+A
Sbjct: 370 -----LQLALFEGCAEGKLWNPTFIVDYPVEVSPLARASDTK-QGLTERFELFVVGRELA 423
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RFK+Q+ K+ + E + +YD DYI A+E+G+PP GCGIG+DRL+
Sbjct: 424 NGYSELNDPEDQAERFKSQVAQKDAGDDE-AMHYDADYIRAMEFGLPPTGGCGIGIDRLV 482
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+ + IRDVILFP +R E
Sbjct: 483 MLLTDLQTIRDVILFPQMRPE 503
>gi|433467569|ref|ZP_20425023.1| lysine--tRNA ligase [Neisseria meningitidis 87255]
gi|432202403|gb|ELK58467.1| lysine--tRNA ligase [Neisseria meningitidis 87255]
Length = 503
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 237/441 (53%), Positives = 324/441 (73%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR MGK SF +QD SG +IQLY++N+ + + + DF ++D+GDI+GA+GTLFK
Sbjct: 75 MLKRQMGKASFATIQDVSG-----QIQLYLNNKGVSQEVLDDFNHWDLGDIVGAEGTLFK 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GEL+++VS ++L++KSLRPLP+K + LS+QE KYR RY+DLI NE +R F KR+QI
Sbjct: 130 TNHGELTVRVSDIRLLSKSLRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQI 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I S+R+FM ++EVETP++H PGGA AKPF+THHN+L++ ++LRIAPELYLKRL++G
Sbjct: 190 IQSVRNFMVGEHYLEVETPMMHPIPGGATAKPFVTHHNALDIPLYLRIAPELYLKRLVVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN++FRNEG+S RHNPEFTMIEFY A+++Y +M+ E +I+ GT
Sbjct: 250 GLERVFEINRSFRNEGMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTAN 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I Y G+ +D FE+LTI++AIKKY P Y + L + +LK E+ K + +
Sbjct: 310 ITYNGKEVDLESPFERLTILDAIKKYNPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGS 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E KLWNPT+I +YP E+SPLAR S+ +TERFELF++G E+A
Sbjct: 370 -----LQLALFEGCAEGKLWNPTFIIDYPVEVSPLARASD-SKPGLTERFELFVVGRELA 423
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RFK Q+ K+ + E + +YD DYI A+E+G+PP GCGIG+DRL+
Sbjct: 424 NGYSELNDPEDQAERFKAQVAQKDAGDDE-AMHYDADYIRAMEFGLPPTGGCGIGIDRLV 482
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S+ IRDVILFP +R E
Sbjct: 483 MLLTDSQTIRDVILFPQMRPE 503
>gi|303257505|ref|ZP_07343517.1| lysine--tRNA ligase [Burkholderiales bacterium 1_1_47]
gi|302859475|gb|EFL82554.1| lysine--tRNA ligase [Burkholderiales bacterium 1_1_47]
Length = 511
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 241/442 (54%), Positives = 318/442 (71%), Gaps = 13/442 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKN-YDIGDIIGAKGTLF 59
MLKRVMGK SF+ ++D G D IQ +I+ + Y FK DIGDI+GA GTLF
Sbjct: 81 MLKRVMGKASFLTVKD--GTDH---IQFFITKAEVDDETYDFFKKMVDIGDIVGATGTLF 135
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
T TGELS++V + +L+TK++RPLP+KF LS+ E +YR RY+DLI+NE+TR+ F R++
Sbjct: 136 FTKTGELSVRVKNFRLLTKNIRPLPDKFHGLSDPETRYRQRYVDLIMNESTRRTFMIRSK 195
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+ R FM ++ FMEVETP+LH PGGA AKPFITHHN+L+M M+LRIAPELYLKRL++
Sbjct: 196 AIAETRKFMMEHHFMEVETPMLHPIPGGANAKPFITHHNALDMDMYLRIAPELYLKRLVV 255
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N++FRNEG+ RHNPEFTM+EFYAAY Y WLM +TEK+++ + IGT
Sbjct: 256 GGFERVFELNRSFRNEGVDVRHNPEFTMMEFYAAYKEYHWLMDYTEKLLRTVAEKTIGTA 315
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
I YQG +D +K F++LT EA+ KY PQY L++K F++ ELK++ +
Sbjct: 316 VIQYQGHTIDLTKPFDRLTAKEAVLKYAPQYTPEQLEDKDFMQEELKRLGEPAKADAGVG 375
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
LQ+ +FE E+KL PTYI +YP EISPLAR S+ + ITERFELF+ G E
Sbjct: 376 -----ALQMAIFEAVAESKLIQPTYIIDYPVEISPLARASD-KVPGITERFELFMAGRET 429
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
ANGFSELNDP++Q+ RF Q LK + E + YYD DY+ ALEYG+PP GCG+G+DR
Sbjct: 430 ANGFSELNDPQDQAARFMAQAKLKASGDDE-AMYYDADYVRALEYGLPPTGGCGVGLDRF 488
Query: 420 IMLLTNSKNIRDVILFPHLRNE 441
+MLLT+S +IRDV+LFPH+R E
Sbjct: 489 VMLLTDSPSIRDVLLFPHMRPE 510
>gi|350569991|ref|ZP_08938368.1| lysine--tRNA ligase [Neisseria wadsworthii 9715]
gi|349797566|gb|EGZ51324.1| lysine--tRNA ligase [Neisseria wadsworthii 9715]
Length = 504
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 234/441 (53%), Positives = 329/441 (74%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
ML+R MGK SF +QD SG +IQ+Y++N+ +G++++ FK++D+GDIIG +G+LFK
Sbjct: 76 MLQRAMGKASFATIQDVSG-----QIQVYVNNQGVGEDVHNAFKHWDLGDIIGVEGSLFK 130
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GEL+++ S L L+TKSLRPLP+K + L++QE KYR RY DLI N+++R F KR++I
Sbjct: 131 TNHGELTVRASKLHLLTKSLRPLPDKHKGLTDQEQKYRQRYADLITNQDSRDTFIKRSKI 190
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I ++R++M ++EVETP++H PGGA AKPF+THHN+L+M ++LRIAPELYLKRL++G
Sbjct: 191 IQAVRNYMVNERYLEVETPMMHPIPGGATAKPFVTHHNALDMPLYLRIAPELYLKRLVVG 250
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN++FRNEG+S RHNPEFTM+EFY A+ Y +M+ TE +I+ + G K
Sbjct: 251 GLERVFEINRSFRNEGMSTRHNPEFTMMEFYEAFCTYERMMEMTEGVIRHAAKEVCGNAK 310
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ Y G+ +D FE+LTI+EAIKKY PQY + L + +LK E+ K + +KI +
Sbjct: 311 VSYNGKEVDLESPFERLTILEAIKKYNPQYTDEQLNDAEWLKKEIVK-----HGEKIPPS 365
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E+KLWNPT+I +YP E+SPLAR S+ + +T+RFELFI+G E+A
Sbjct: 366 PGIGSLQLALFEGCAESKLWNPTFIIDYPVEVSPLARASDTK-PGLTDRFELFIVGRELA 424
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RFK Q+ K+ + E + +YD DYI A+EYG+PP G GIG+DRL+
Sbjct: 425 NGYSELNDPEDQAARFKAQVAQKDAGDDE-AMHYDADYIRAMEYGLPPTGGSGIGLDRLV 483
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT++ +IRDVILFP +R E
Sbjct: 484 MLLTDAPSIRDVILFPQMRPE 504
>gi|422348607|ref|ZP_16429500.1| lysine-tRNA ligase [Sutterella wadsworthensis 2_1_59BFAA]
gi|404659138|gb|EKB31996.1| lysine-tRNA ligase [Sutterella wadsworthensis 2_1_59BFAA]
Length = 509
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 236/442 (53%), Positives = 323/442 (73%), Gaps = 12/442 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR+MGK SF ++D +G +Q +I+ IG+ Y +K +D+GDI+ KGTLF+
Sbjct: 78 MLKRIMGKASFATVRDFTG-----DMQYFITKGDIGEEAYAAWKTFDLGDIVAVKGTLFR 132
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELSI+ L+L+TK++RPLP+K + L + E+ YR RY+DLI+NE++R F R++
Sbjct: 133 TKTGELSIRAHELRLMTKNIRPLPDKHKGLVDTEMCYRQRYVDLIMNEDSRNRFLVRSKA 192
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I++IR FM + F+EVETP+LH PGGA AKPFITHHN+L+M M+LRIAPELYLKRL++G
Sbjct: 193 IAAIRSFMLAHRFLEVETPMLHPIPGGANAKPFITHHNALDMDMYLRIAPELYLKRLVVG 252
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+S RHNPEFTM+EFY Y Y M+FTE +++ + G+
Sbjct: 253 GFERVFEINRNFRNEGVSVRHNPEFTMMEFYCTYWTYRDQMQFTEDLLRTAAREATGSAI 312
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQG +D K F++LT +EAI KY+P Y L ++ FL++EL ++ + +
Sbjct: 313 LPYQGHEIDLEKPFDRLTPVEAILKYSPDYTAEQLADEAFLRAELVRLG-----EPQPDY 367
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
+ LQ+ LFEETTE KL PT+I +YPTEISPLAR S+ N+++TERFELFI G E+
Sbjct: 368 VGLGALQMALFEETTEAKLIQPTFIIDYPTEISPLARASDA-NHDVTERFELFIAGRELG 426
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDP++Q+ RFK Q D K+ + E + YYD DYI ALEYG+PP +GCG+G+DR I
Sbjct: 427 NGFSELNDPDDQAARFKAQADAKSHGDDE-AMYYDADYIRALEYGLPPTAGCGVGIDRFI 485
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT++ IRDV+LFPH+R E+
Sbjct: 486 MLLTDAPTIRDVLLFPHMRPES 507
>gi|319942464|ref|ZP_08016776.1| lysyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
gi|319804013|gb|EFW00926.1| lysyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
Length = 505
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 234/442 (52%), Positives = 324/442 (73%), Gaps = 12/442 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMG+++F ++D +G +Q ++ +G+ Y DFK D+GDI+ +GTL +
Sbjct: 74 MLKRVMGRLTFATVRDYTG-----TMQYFVQESTVGEAAYADFKTLDLGDIVACEGTLMR 128
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T G+L+IKV+S +L+ KSLRP+P+K + L +QE YR RY+DL++N +R+ F KR++
Sbjct: 129 TQAGDLAIKVTSFRLMAKSLRPMPDKHKGLQDQEFCYRRRYVDLMVNAESRERFIKRSKA 188
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+SIR+FM NDF+EVETP+LH PGGA A+PFITHHN+LN +M+LRIAPELYLKRL++G
Sbjct: 189 IASIRNFMLANDFLEVETPMLHPIPGGANARPFITHHNALNTEMYLRIAPELYLKRLVVG 248
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEGI RHNPEFTM+EFYA Y Y M+FTE +++ + + G+
Sbjct: 249 GFERVFEINRNFRNEGIDARHNPEFTMMEFYATYWTYKDQMEFTEALLRHVAREVTGSAI 308
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQG ++F + F+KLT +AI KY+P+Y E L ++ FLK E+K++ L +
Sbjct: 309 VTYQGMTINFEEPFDKLTPKQAILKYSPEYTESQLTDEDFLKKEIKRLGADEQIDPTLGS 368
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQ+ LF+ET E KL PT+I +YPTEISPLAR S++ N +ITERFELFI G E A
Sbjct: 369 -----LQMALFDETVEKKLIKPTFIIDYPTEISPLARASDV-NPDITERFELFIAGRETA 422
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDP++Q+ RF+ Q++ K + E + YYD DY+ ALEYG+PP +GCGIG+DR +
Sbjct: 423 NGFSELNDPDDQAARFRAQVERKGHGDDE-AMYYDADYVTALEYGLPPTAGCGIGIDRFM 481
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT++ IRDV+LFP LR E+
Sbjct: 482 MLLTDAPTIRDVLLFPALRPES 503
>gi|298370419|ref|ZP_06981735.1| lysine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
gi|298281879|gb|EFI23368.1| lysine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
Length = 503
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 233/441 (52%), Positives = 326/441 (73%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR MGK SF +QD SG +IQLY++N+ + + + DF ++D+GDI+GA+GTLFK
Sbjct: 75 MLKRQMGKASFATIQDMSG-----QIQLYLNNKGVSQEVLDDFNHWDLGDIVGAEGTLFK 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GEL+++VS+++L++KSLRPLP+K + L++QE+KYR RY+DLI+N +R F KR++I
Sbjct: 130 TNHGELTVRVSAIRLLSKSLRPLPDKHKGLADQEVKYRQRYVDLIVNPESRDTFIKRSKI 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I ++R++M ++EVETP++H PGGA AKPFITHHN+L+M ++LRIAPELYLKRL++G
Sbjct: 190 IQTVRNYMVSEGYLEVETPMMHPIPGGATAKPFITHHNALDMPLYLRIAPELYLKRLVVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN++FRNEG+S RHNPEFTM+EFY A+ Y +M+ TE +I+ G K
Sbjct: 250 GLERVFEINRSFRNEGMSTRHNPEFTMMEFYEAFCTYERMMEMTEGVIRACAETVCGAAK 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I G+ +D + FE+LTI+EAIKKY P Y + L ++ +LK E+ K + +
Sbjct: 310 ISCNGKEVDLASPFERLTILEAIKKYNPHYTDEQLADEAWLKKEIVKHGESLPPSPGIGS 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E KLWNPT+I +YP E+SPLAR S+ + +T+RFELF++G E+A
Sbjct: 370 -----LQLALFEGCAEGKLWNPTFIIDYPVEVSPLARASDTK-PGLTDRFELFVVGRELA 423
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+QS RF+ Q+ K+ + E + +YD DYI A+EYG+PP G GIG+DRL+
Sbjct: 424 NGYSELNDPEDQSTRFRAQVAQKDAGDDE-AMHYDADYIRAMEYGLPPTGGSGIGLDRLV 482
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S+ IRDVILFP +R E
Sbjct: 483 MLLTDSQTIRDVILFPQMRPE 503
>gi|378821999|ref|ZP_09844838.1| lysine--tRNA ligase [Sutterella parvirubra YIT 11816]
gi|378599189|gb|EHY32238.1| lysine--tRNA ligase [Sutterella parvirubra YIT 11816]
Length = 503
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 226/442 (51%), Positives = 322/442 (72%), Gaps = 12/442 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR+MG+ SF ++D +G +Q ++ + +G Y FK +D+GD++ A+GTLF+
Sbjct: 73 MLKRLMGRASFATVRDFTG-----AMQYFVQEDAVGAEAYAAFKQFDLGDVVAARGTLFR 127
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T G+L++ V ++L+ K +RPLP+K + L + E+ YR RY+DLI+NE +R F R++
Sbjct: 128 TKAGDLAVAVRDIRLMAKCIRPLPDKHKGLVDTEMCYRQRYVDLIMNEESRSRFLVRSKA 187
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I++IR FM N F+EVETP+LH PGGA AKPF+THHN+L+M M+LRIAPELYLKRL++G
Sbjct: 188 IAAIRGFMIANRFLEVETPMLHPIPGGANAKPFVTHHNALDMDMYLRIAPELYLKRLVVG 247
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+S RHNPEFTM+EFYA Y Y M FTE +++ + + G+
Sbjct: 248 GFERVFEINRNFRNEGVSARHNPEFTMMEFYATYWTYRDQMDFTEALLRHVAQEATGSAV 307
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQG +D S+ F++LT ++AI+KY PQY + DL + +L++EL+++ L +
Sbjct: 308 LHYQGETIDLSEPFDRLTPVDAIRKYNPQYADADLTSVGYLRAELERLEADIPIDAGLGS 367
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQ+ LF+ETTE KL PT+I +YPTEISPLAR S+ EN+++TERFELFI G E A
Sbjct: 368 -----LQMTLFDETTEKKLIKPTFIIDYPTEISPLARASD-ENHDVTERFELFIAGRETA 421
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDP++Q+ RF+ Q++ K+ + E + YYD DYI ALEY + P +GCG+G+DR +
Sbjct: 422 NGFSELNDPDDQAERFRAQVERKSHGDDE-AMYYDADYIAALEYALAPTAGCGVGIDRFM 480
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT++ IRDV+LFPH+R E
Sbjct: 481 MLLTDAPTIRDVLLFPHMRPEG 502
>gi|421556920|ref|ZP_16002829.1| lysine--tRNA ligase [Neisseria meningitidis 80179]
gi|402335605|gb|EJU70869.1| lysine--tRNA ligase [Neisseria meningitidis 80179]
Length = 503
Score = 506 bits (1303), Expect = e-141, Method: Compositional matrix adjust.
Identities = 236/441 (53%), Positives = 324/441 (73%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR MGK SF +QD SG +IQLY++N+ + + + DF ++D+GDI+GA+GTLFK
Sbjct: 75 MLKRQMGKASFATIQDVSG-----QIQLYLNNKGVSQEILDDFNHWDLGDIVGAEGTLFK 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GEL+++VS ++L++KSLRPLP+K + LS+QE KYR RY+DLI N +R F KR+QI
Sbjct: 130 TNHGELTVRVSGIRLLSKSLRPLPDKHKGLSDQETKYRQRYVDLIANGESRNTFIKRSQI 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I S+R+FM ++EVETP++H PGGA AKPF+THHN+L++ ++LRIAPELYLKRL++G
Sbjct: 190 IQSVRNFMVGEHYLEVETPMMHPIPGGATAKPFVTHHNALDIPLYLRIAPELYLKRLVVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN++FRNEG+S RHNPEFTMIEFY A+++Y +M+ E +I+ GT
Sbjct: 250 GLERVFEINRSFRNEGMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTAN 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I Y G+ +D FE+LTI+EAIKKY P Y + L + +LK E+ K + +
Sbjct: 310 ITYNGKEVDLESPFERLTILEAIKKYNPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGS 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E KLWNPT+I +YP E+SPLAR S+ + +TERFELF++G E+A
Sbjct: 370 -----LQLALFEGCAEGKLWNPTFIIDYPVEVSPLARASDTK-QGLTERFELFVVGRELA 423
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RFK+Q+ K+ + E + +YD DYI A+E+ +PP GCGIG+DRL+
Sbjct: 424 NGYSELNDPEDQAERFKSQVAQKDAGDDE-AMHYDADYIRAMEFALPPTGGCGIGIDRLV 482
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S+ IRDVILFP +R E
Sbjct: 483 MLLTDSQTIRDVILFPQMRPE 503
>gi|399154588|ref|ZP_10754655.1| lysyl-tRNA ligase [gamma proteobacterium SCGC AAA007-O20]
Length = 494
Score = 506 bits (1303), Expect = e-141, Method: Compositional matrix adjust.
Identities = 254/446 (56%), Positives = 321/446 (71%), Gaps = 22/446 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
MLKRVMGK SF+ LQD+SG +IQL+++ + +G Y D FK +DIGDI+G G LF
Sbjct: 66 MLKRVMGKASFVQLQDSSG-----QIQLFVTRDELGDGFYNDQFKKWDIGDIVGVTGVLF 120
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELS++V+ +KL+TKSLRPLP KF LS+QE YR RY+DLI+NEN+RKVF++R+Q
Sbjct: 121 KTKTGELSVRVNDIKLLTKSLRPLPEKFHGLSDQETIYRQRYVDLIVNENSRKVFQRRSQ 180
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
II+ IR F N ++EVETP++ PGGA AKPF+THH +L+M++FLRIAPELYLKRLI+
Sbjct: 181 IIAYIRQFFIDNGYLEVETPMMQVIPGGARAKPFVTHHKALDMELFLRIAPELYLKRLIV 240
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GG ++FEIN+NFRNEG+S RHNPEFTMIEFY AY Y M TE ++K I +D +
Sbjct: 241 GGLERVFEINRNFRNEGLSTRHNPEFTMIEFYQAYATYHDFMDLTEDLLKGIAIDVCESN 300
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
KI YQG DFSKSF++L++ ++I KY PQ DL + N K KK+
Sbjct: 301 KIHYQGDDFDFSKSFDRLSVFDSILKYNPQLKANDLSVE----------NAKKTAKKLGV 350
Query: 300 NLKKDI----LQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFII 355
NLK +Q+ +FE T E KL PT+IT YPTE+SPL+R+ N E+ T+RFELFI
Sbjct: 351 NLKDSWGLGRIQIEIFEATVEEKLIQPTFITQYPTEVSPLSRR-NDEDPFTTDRFELFIG 409
Query: 356 GNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIG 415
G EIANGFSELND EEQ+ RF Q K+ N E + +YD DYI ALEYGMPP +G GIG
Sbjct: 410 GREIANGFSELNDAEEQAQRFLEQAKEKDAGNDE-AMHYDADYIRALEYGMPPTAGEGIG 468
Query: 416 VDRLIMLLTNSKNIRDVILFPHLRNE 441
VDRL+M TNS +IRDV+LFPH+R E
Sbjct: 469 VDRLVMFFTNSPSIRDVLLFPHMRPE 494
>gi|241759648|ref|ZP_04757749.1| lysine--tRNA ligase [Neisseria flavescens SK114]
gi|241320020|gb|EER56401.1| lysine--tRNA ligase [Neisseria flavescens SK114]
Length = 503
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 236/441 (53%), Positives = 325/441 (73%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR MGK SF +QD +G +IQLY++N+ + + + DF ++D+GDI+G +GTLFK
Sbjct: 75 MLKRQMGKASFATIQDVTG-----QIQLYLNNKGVSQEVLDDFNHWDLGDIVGTEGTLFK 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GEL+++VS+++L++KSLRPLP+K + LS+QE KYR RY+DLI NE +R F KR+QI
Sbjct: 130 TNHGELTVRVSNIRLLSKSLRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQI 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I S+R+FM ++EVETP++H PGGA AKPF+THHN+L++ ++LRIAPELYLKRL++G
Sbjct: 190 IQSVRNFMVNEHYLEVETPMMHPIPGGATAKPFVTHHNALDIPLYLRIAPELYLKRLVVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN++FRNEG+S RHNPEFTMIEFY A+++Y +M+ E +I+ GT K
Sbjct: 250 GLERVFEINRSFRNEGMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRAVNGTAK 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I Y G+ +D FE+LTI+ AIKKY P Y + L ++ +LK E+ K + +
Sbjct: 310 ISYNGKEVDLESPFERLTILGAIKKYNPHYTDEQLNDEEWLKKEIVKHGESLPPSPGIGS 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E KLWNPT+I +YP E+SPLAR S+ +TERFELF++G E+A
Sbjct: 370 -----LQLALFEGCAEGKLWNPTFIIDYPVEVSPLARASD-SKPGLTERFELFVVGRELA 423
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RFK Q+ K+ + E + +YD DYI A+E+G+PP GCGIG+DRL+
Sbjct: 424 NGYSELNDPEDQAERFKAQVAQKDAGDDE-AMHYDADYIRAMEFGLPPTGGCGIGIDRLV 482
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S+ IRDVILFP +R E
Sbjct: 483 MLLTDSQTIRDVILFPQMRPE 503
>gi|194099248|ref|YP_002002342.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
gi|238690219|sp|B4RP57.1|SYK_NEIG2 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|193934538|gb|ACF30362.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
Length = 503
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 235/441 (53%), Positives = 324/441 (73%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR MGK SF +QD +G +IQLY++N+ + + + F ++D+GDI+GA+GTLFK
Sbjct: 75 MLKRQMGKASFATIQDVTG-----QIQLYLNNKGVSQEVLDGFNHWDLGDIVGAEGTLFK 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GEL+++VS ++L++KSLRPLP+K + LS+QE KYR RY+DLI NE +R F KR+QI
Sbjct: 130 TNHGELTVRVSDIRLLSKSLRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQI 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I S+R+FM ++EVETP++H PGGA AKPF+THHN+L++ ++LRIAPELYLKRL++G
Sbjct: 190 IQSVRNFMVGEHYLEVETPMMHPIPGGATAKPFVTHHNALDIPLYLRIAPELYLKRLVVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN++FRNEG+S RHNPEFTMIEFY A+++Y +M+ E +I+ GT
Sbjct: 250 GLERVFEINRSFRNEGMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTAN 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I Y G+ +D FE+LTI+EAIKKY P Y + L + +LK E+ K + +
Sbjct: 310 ITYNGKEVDLESPFERLTILEAIKKYNPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGS 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E KLWNPT+I +YP E+SPLAR S+ + +TERFELF++G E+A
Sbjct: 370 -----LQLALFEGCAEGKLWNPTFIVDYPVEVSPLARASDTK-QGLTERFELFVVGRELA 423
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RFK+Q+ K+ + E + +YD DYI A+E+G+PP GCGIG+DRL+
Sbjct: 424 NGYSELNDPEDQAERFKSQVAQKDAGDDE-AMHYDADYIRAMEFGLPPTGGCGIGIDRLV 482
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+ + IRDVILFP +R E
Sbjct: 483 MLLTDLQTIRDVILFPQMRPE 503
>gi|124265793|ref|YP_001019797.1| lysyl-tRNA synthetase [Methylibium petroleiphilum PM1]
gi|166229811|sp|A2SDC3.1|SYK_METPP RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|124258568|gb|ABM93562.1| lysyl-tRNA synthetase [Methylibium petroleiphilum PM1]
Length = 508
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 235/442 (53%), Positives = 318/442 (71%), Gaps = 13/442 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK F LQD SG +IQLYI+++ +G FK++D+GDI+GA+GTLFK
Sbjct: 80 MLKRVMGKACFATLQDGSG-----RIQLYITSDAVGPEALAAFKHWDLGDILGAEGTLFK 134
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+KV +++L+TKSLRPLP+KF +++QE+KYR R +DLI++E +R+ F+ R++
Sbjct: 135 TRTGELSLKVGTIRLLTKSLRPLPDKFHGMADQELKYRQREVDLIMDEASRERFRARSKA 194
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+SSIR FM ++ F+EVETP+LH PGGA AKPF+THHN+L+ +MFLRIAPELYLKRL++G
Sbjct: 195 VSSIRQFMVEHGFLEVETPMLHPIPGGANAKPFVTHHNALDQQMFLRIAPELYLKRLVVG 254
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+S RHNPEFTM+EFYAAY + LM FTE++++ +GT +
Sbjct: 255 GFERVFEINRNFRNEGVSVRHNPEFTMMEFYAAYWTHHDLMDFTEQILRHAARKAVGTAQ 314
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ Y G+ +D F +L++ +++ + + + + L+++L+ K L
Sbjct: 315 LAYGGQAVDLESPFARLSVRDSLIAHA-GLSAAEAADTTVLRAKLEAHGEKAPAHWSLAE 373
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQ LFE E KLW PT+I +YP E+SPLAR S+ + ITERFELFI G E
Sbjct: 374 -----LQFGLFEAAVEEKLWQPTFIVDYPVEVSPLARASDA-DPTITERFELFITGREFG 427
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF Q K+ E + Y+DTDYI ALE+G+PP GCGIG+DRL+
Sbjct: 428 NGFSELNDPEDQAARFAAQASNKD-AGDEEAMYFDTDYIRALEHGLPPTGGCGIGIDRLM 486
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S NIRDVILFP LR E
Sbjct: 487 MLLTDSPNIRDVILFPALRREG 508
>gi|319942341|ref|ZP_08016656.1| lysyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
gi|319804214|gb|EFW01114.1| lysyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
Length = 509
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 234/442 (52%), Positives = 321/442 (72%), Gaps = 12/442 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR+MGK SF ++D +G +Q ++ +G + Y FK +D+GDI+ AKG LF+
Sbjct: 78 MLKRIMGKASFCTVRDFTG-----TMQYFVQQNEVGPDAYAAFKTFDLGDIVAAKGVLFR 132
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T+ G+L+I+V ++L+TKS+RPLP+K + L + E+ YR RY+DLI+NE +R F R++
Sbjct: 133 THAGDLAIRVKEIRLMTKSIRPLPDKHKGLQDTELCYRQRYVDLIMNEESRNRFLTRSKA 192
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I++IR FM + F+EVETP+LH PGGA AKPFITHHN+L+M M+LRIAPELYLKRL++G
Sbjct: 193 IAAIRAFMLNHRFLEVETPMLHPIPGGANAKPFITHHNALDMDMYLRIAPELYLKRLVVG 252
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+S RHNPEFTM+EFYA Y Y M FTE++++ + + G+
Sbjct: 253 GFERVFEINRNFRNEGVSVRHNPEFTMMEFYATYWTYRDQMDFTEELLRTVAKEATGSMV 312
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQG +D SK F +LT + AIKK+ P Y + +L N F+++ELK++ +I +
Sbjct: 313 LQYQGHEIDLSKPFHRLTPLAAIKKFAPNYTDEELNNPDFIRAELKRLG-----GEIPVD 367
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQ+ LFEET E KL PT+I +YP EISPLAR S+ + ITERFEL+I G E A
Sbjct: 368 AGLGALQMALFEETAEAKLIEPTFIIDYPVEISPLARASDA-DPEITERFELYIAGRETA 426
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDP++Q+ RF+ Q D K+ + E + YYD DYI ALEYG+PP +GCGIG+DR +
Sbjct: 427 NGFSELNDPDDQAARFRAQADKKSHGDDE-AMYYDADYIRALEYGLPPTAGCGIGIDRFM 485
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT++ IRDV+LFPH+R EN
Sbjct: 486 MLLTDAPTIRDVLLFPHMRPEN 507
>gi|430377336|ref|ZP_19431469.1| lysyl-tRNA ligase [Moraxella macacae 0408225]
gi|429540473|gb|ELA08502.1| lysyl-tRNA ligase [Moraxella macacae 0408225]
Length = 512
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 243/444 (54%), Positives = 327/444 (73%), Gaps = 21/444 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR+MGK SFI L D SG KIQ Y+S +G +Y DFK +DIGDI+G +G LF+
Sbjct: 82 MLKRIMGKASFITLADMSG-----KIQAYVSKNDLGDEIYNDFKTWDIGDIVGIQGYLFR 136
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TNTGELS+ ++++L+TKSLRPLP+KF L++ E +YR R++DL+ N+++RK F R+Q+
Sbjct: 137 TNTGELSVHATTVQLLTKSLRPLPDKFHGLADTEARYRSRHLDLMTNDDSRKTFIIRSQV 196
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+ IR FM FMEVETP++H PGGA+A+PF+THHN+L+M +FLRIAPELYLKRL++G
Sbjct: 197 IAGIRKFMLDKRFMEVETPMMHVIPGGAVARPFVTHHNALDMPLFLRIAPELYLKRLVVG 256
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+S RHNPEFTMIEFY AY +Y LM TE M++ + MD +GTTK
Sbjct: 257 GFERVFEINRNFRNEGVSARHNPEFTMIEFYEAYADYQDLMTLTENMLETLAMDILGTTK 316
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
++YQG L F F +L++ +AI+KY ++ + ++ +L +K NQ L+
Sbjct: 317 LNYQGEALSFKAPFARLSMTKAIEKYATDFDMNKINDRDYLADYVK------NQ---LHM 367
Query: 301 LKKDI-----LQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFII 355
KDI LQ ++FEET ETKL PT+IT YP E SPLAR+ N +N IT+RFELFI
Sbjct: 368 EVKDIFGIGKLQTIIFEETAETKLRQPTFITEYPAETSPLARR-NDDNPEITDRFELFIG 426
Query: 356 GNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIG 415
G EIANGFSELNDP +Q+ RF+ Q+ K+ + E + +YD ++I ALEYG+PP +G GIG
Sbjct: 427 GREIANGFSELNDPIDQAERFRQQVAEKDAGDDE-AMHYDGEFIEALEYGLPPTAGEGIG 485
Query: 416 VDRLIMLLTNSKNIRDVILFPHLR 439
+DRL+ML N+ +IRDVILFPH+R
Sbjct: 486 IDRLVMLFANAPSIRDVILFPHMR 509
>gi|269469091|gb|EEZ80642.1| lysyl-tRNA synthetase, class II [uncultured SUP05 cluster
bacterium]
Length = 496
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 249/442 (56%), Positives = 329/442 (74%), Gaps = 14/442 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
MLKRVMGK SF LQD+S KIQ++ + + + + Y + FK +DIGDIIGA GTLF
Sbjct: 66 MLKRVMGKASFATLQDSSA-----KIQIFATRDELPEGFYNEQFKKWDIGDIIGAVGTLF 120
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KTN GELSI++S +KL+TKSLRPLP KF L++QEI+YR RY+DLI++E++R VFK+R+Q
Sbjct: 121 KTNVGELSIRISQIKLLTKSLRPLPEKFHGLADQEIRYRQRYVDLIVSEDSRNVFKRRSQ 180
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR+F + DF+EVETP+L PGGA AKPF THHN+L++ M+LRIAPELYLKRLI+
Sbjct: 181 IVAYIRNFFNEFDFIEVETPMLQTIPGGATAKPFETHHNALDIGMYLRIAPELYLKRLIV 240
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GG +K+FEIN+NFRNEG+S RHNPEFTMIEFY AY Y LM TE++ + I +D G +
Sbjct: 241 GGMDKVFEINRNFRNEGLSTRHNPEFTMIEFYQAYATYHDLMDLTEQLFRGIAVDVCGNS 300
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
I YQG DFSKSF+++++ ++I KY P+ DL ++ +K+ +K+ ++ +
Sbjct: 301 SIHYQGDDFDFSKSFDRISVFDSILKYNPKLTPDDL-SEANVKATAEKLG-----IQVKD 354
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
N Q+ +FE T E KL PT+IT YPTE+SPLAR+ N N IT+RFELFI G EI
Sbjct: 355 NWGLGKTQIEIFEATVEEKLIQPTFITEYPTEVSPLARR-NDNNPFITDRFELFIGGREI 413
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
ANGFSELND E+Q+ RFK Q+ K+ + E + +YD DYI ALEYGMPP +G GIG+DRL
Sbjct: 414 ANGFSELNDAEDQATRFKAQVAEKDAGDDE-AMHYDADYIRALEYGMPPTAGEGIGIDRL 472
Query: 420 IMLLTNSKNIRDVILFPHLRNE 441
+ML T+S +IRDV+LFPH+R E
Sbjct: 473 VMLFTDSPSIRDVLLFPHMRPE 494
>gi|269469084|gb|EEZ80637.1| lysyl-tRNA synthetase, class II [uncultured SUP05 cluster
bacterium]
Length = 496
Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust.
Identities = 248/446 (55%), Positives = 327/446 (73%), Gaps = 22/446 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
MLKRVMGK SF LQD+S KIQ++ + + + + Y + FK +DIGDIIGA GTLF
Sbjct: 66 MLKRVMGKASFATLQDSSA-----KIQIFATRDELPEGFYNEQFKKWDIGDIIGAVGTLF 120
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KTN GELSI++S +KL+TKSLRPLP KF L++QEI+YR RY+DLI++E++R VFK+R+Q
Sbjct: 121 KTNVGELSIRISQIKLLTKSLRPLPEKFHGLADQEIRYRQRYVDLIVSEDSRNVFKRRSQ 180
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR+F ++DF+EVETP+L PGGA AKPF THHN+L++ M+LRIAPELYLKRLI+
Sbjct: 181 IVAYIRNFFNESDFIEVETPMLQTIPGGATAKPFETHHNALDIGMYLRIAPELYLKRLIV 240
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GG +K+FEIN+NFRNEG+S RHNPEFTMIEFY AY Y LM TE++ + I +D G +
Sbjct: 241 GGMDKVFEINRNFRNEGLSTRHNPEFTMIEFYQAYATYHDLMDLTEQLFRGIAVDVCGNS 300
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
I YQG DFSKSF+++++ ++I KY P+ + L + N + +K+
Sbjct: 301 SIHYQGDDFDFSKSFDRISVFDSILKYNPK----------LIPDNLSEANARATAEKLGI 350
Query: 300 NLKKDI----LQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFII 355
+K + Q+ +FE T E KL PT+IT YPTE+SPLAR+ N N IT+RFELFI
Sbjct: 351 QVKDNWGLGKTQIEIFEATVEEKLIQPTFITEYPTEVSPLARR-NDNNPFITDRFELFIG 409
Query: 356 GNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIG 415
G EIANGFSELND E+Q+ RFK Q+ K+ + E + +YD DYI ALEYGMPP +G GIG
Sbjct: 410 GREIANGFSELNDAEDQATRFKAQVAEKDAGDDE-AMHYDADYIRALEYGMPPTAGEGIG 468
Query: 416 VDRLIMLLTNSKNIRDVILFPHLRNE 441
+DRL+ML T+S +IRDV+LFPH+R E
Sbjct: 469 IDRLVMLFTDSPSIRDVLLFPHMRPE 494
>gi|54294664|ref|YP_127079.1| hypothetical protein lpl1741 [Legionella pneumophila str. Lens]
gi|81368463|sp|Q5WVS0.1|SYK_LEGPL RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|53754496|emb|CAH15980.1| hypothetical protein lpl1741 [Legionella pneumophila str. Lens]
Length = 496
Score = 503 bits (1295), Expect = e-140, Method: Compositional matrix adjust.
Identities = 239/442 (54%), Positives = 333/442 (75%), Gaps = 17/442 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYI-SNEIIGKNLYTDFKNYDIGDIIGAKGTLF 59
+L+R+MGK SF +QD SG +IQ+Y+ SN++ ++Y FK++D+GDI+G +G LF
Sbjct: 70 VLRRIMGKASFFHIQDVSG-----RIQVYLRSNDL--PDVYEQFKHWDLGDIVGVQGELF 122
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KTNTGEL+I ++L+TKSLRPLP+KF L++QE+KYR RY+DLI NE++RK F R+
Sbjct: 123 KTNTGELTINAEHVELLTKSLRPLPDKFHGLADQELKYRKRYVDLIANEDSRKTFLIRSH 182
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+I + R FM+ N F+EVETP++H PGGA+A+PF+THHN+L+M M+LRIAPELYLKRL++
Sbjct: 183 LIKAFREFMDDNHFLEVETPMMHPIPGGALARPFVTHHNTLDMTMYLRIAPELYLKRLVV 242
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF +++EIN+NFRNEGIS RHNPEFTM+EFY AY +Y LM FTE++ + + T
Sbjct: 243 GGFERVYEINRNFRNEGISTRHNPEFTMLEFYQAYADYNDLMNFTEQLFHYLCDKVLATR 302
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+I+YQG+++DF+K FE+L++ EAI KY P L+ ++ L ++ + + L
Sbjct: 303 QIEYQGQVIDFNKPFERLSVKEAILKYHPDIKAQQLETVEGCRTLLNDLDLPYKETDGLG 362
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
LQ++LFEET E +L+ PT+IT YPTEISPLAR+S+ N +T+RFE FI G EI
Sbjct: 363 K-----LQIILFEETVEHQLFQPTFITEYPTEISPLARRSDT-NPEVTDRFEFFIAGREI 416
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSS-YYDTDYIHALEYGMPPASGCGIGVDR 418
ANGFSELND E+Q+ RF+ Q++ K+ G+L + ++D+DYI ALEYG+PP +G GIG+DR
Sbjct: 417 ANGFSELNDAEDQAERFRKQVEEKD--AGDLEAMHFDSDYIEALEYGLPPTAGEGIGIDR 474
Query: 419 LIMLLTNSKNIRDVILFPHLRN 440
L+ML TNS++IRDVILFPHLR
Sbjct: 475 LVMLFTNSQSIRDVILFPHLRQ 496
>gi|407791981|ref|ZP_11139056.1| lysyl-tRNA synthetase [Gallaecimonas xiamenensis 3-C-1]
gi|407198457|gb|EKE68491.1| lysyl-tRNA synthetase [Gallaecimonas xiamenensis 3-C-1]
Length = 502
Score = 503 bits (1295), Expect = e-140, Method: Compositional matrix adjust.
Identities = 238/441 (53%), Positives = 328/441 (74%), Gaps = 13/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF +QD SG KIQ+Y++ + + + Y D FK +D+GDIIGA+G LF
Sbjct: 73 MTRRIMGKASFATIQDGSG-----KIQIYVARDNLPEGFYNDEFKKWDLGDIIGAEGFLF 127
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KTNTGELSI V +++L+TK+LRPLP+KF LS+ E +YR RY+DLI NE +R+ F R++
Sbjct: 128 KTNTGELSIHVEAIELLTKALRPLPDKFHGLSDMETRYRQRYLDLIANEESRQTFINRSK 187
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+++IR+FM +DF+EVETP++H PGGA AKPF+THHN+L+M++FLRIAPELYLKRL++
Sbjct: 188 IVNAIRNFMTGHDFLEVETPMMHTIPGGASAKPFMTHHNALDMELFLRIAPELYLKRLVV 247
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y LM FTE M++ + + +GTT
Sbjct: 248 GGFEKVFEINRNFRNEGLSTRHNPEFTMMEFYWAYADYQDLMDFTEAMLRTVAKEVLGTT 307
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
QG DF++SFE+LT+ +AI KY P E DL + K+ + + K ++ L
Sbjct: 308 AFTSQGVDYDFAQSFERLTMTQAIIKYRPDITEADLFDFDKAKAIAESLGMKVSKTDGLG 367
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
LQ +FEE E +L PT+IT YP E+SPLAR+ N +N IT+RFE F+ G E+
Sbjct: 368 K-----LQTYIFEEVAEAQLIQPTFITAYPAEVSPLARR-NDDNPFITDRFEFFVGGREL 421
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
ANGFSELND E+Q+ RF++Q++ K+ E + +YD DY+ ALE+G+PP +G GIG+DRL
Sbjct: 422 ANGFSELNDAEDQAERFRSQVEAKD-AGDEEAMFYDADYVTALEHGLPPTAGQGIGIDRL 480
Query: 420 IMLLTNSKNIRDVILFPHLRN 440
+MLLT+S +IRDV+LFPH+R+
Sbjct: 481 VMLLTDSASIRDVLLFPHMRH 501
>gi|397667504|ref|YP_006509041.1| lysine tRNA synthetase, inducible [Legionella pneumophila subsp.
pneumophila]
gi|395130915|emb|CCD09164.1| lysine tRNA synthetase, inducible [Legionella pneumophila subsp.
pneumophila]
Length = 496
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 239/442 (54%), Positives = 332/442 (75%), Gaps = 17/442 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYI-SNEIIGKNLYTDFKNYDIGDIIGAKGTLF 59
+L+R+MGK SF +QD SG +IQ+Y+ SN++ ++Y FK++D+GDI+G +G LF
Sbjct: 70 VLRRIMGKASFFHIQDVSG-----RIQVYLRSNDL--PDVYEQFKHWDLGDIVGVQGELF 122
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KTNTGEL+I ++L+TKSLRPLP+KF L++QE+KYR RY+DLI NE++RK F R+
Sbjct: 123 KTNTGELTINAEHVELLTKSLRPLPDKFHGLADQELKYRKRYVDLIANEDSRKTFLIRSH 182
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+I + R FM+ N F+EVETP++H PGGA+A+PF+THHN+L+M M+LRIAPELYLKRL++
Sbjct: 183 LIKAFREFMDDNHFLEVETPMMHPIPGGALARPFVTHHNTLDMTMYLRIAPELYLKRLVV 242
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF +++EIN+NFRNEGIS RHNPEFTM+EFY AY +Y LM FTE++ + + T
Sbjct: 243 GGFERVYEINRNFRNEGISTRHNPEFTMLEFYQAYADYNDLMNFTEQLFHYLCDKVLATR 302
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+I+YQG+++DF+K FE+L++ EAI KY P L+ ++ L + + + L
Sbjct: 303 QIEYQGQVIDFNKPFERLSVKEAILKYHPDTKAQQLETVEGCRTLLNDLGLPYKETDGLG 362
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
LQ++LFEET E +L+ PT+IT YPTEISPLAR+S+ N +T+RFE FI G EI
Sbjct: 363 K-----LQIILFEETVEHQLFQPTFITEYPTEISPLARRSDT-NPEVTDRFEFFIAGREI 416
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSS-YYDTDYIHALEYGMPPASGCGIGVDR 418
ANGFSELND E+Q+ RF+ Q++ K+ G+L + ++D+DYI ALEYG+PP +G GIG+DR
Sbjct: 417 ANGFSELNDAEDQAERFRKQVEEKD--AGDLEAMHFDSDYIEALEYGLPPTAGEGIGIDR 474
Query: 419 LIMLLTNSKNIRDVILFPHLRN 440
L+ML TNS++IRDVILFPHLR
Sbjct: 475 LVMLFTNSQSIRDVILFPHLRQ 496
>gi|52842004|ref|YP_095803.1| lysine tRNA synthetase, heat inducible [Legionella pneumophila
subsp. pneumophila str. Philadelphia 1]
gi|148359321|ref|YP_001250528.1| lysine tRNA synthetase [Legionella pneumophila str. Corby]
gi|296107368|ref|YP_003619068.1| lysyl-tRNA synthetase, class II [Legionella pneumophila 2300/99
Alcoy]
gi|378777638|ref|YP_005186076.1| lysine tRNA synthetase, heat inducible [Legionella pneumophila
subsp. pneumophila ATCC 43290]
gi|81377301|sp|Q5ZUL6.1|SYK_LEGPH RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|166229810|sp|A5ICT2.1|SYK_LEGPC RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|52629115|gb|AAU27856.1| lysine tRNA synthetase, heat inducible [Legionella pneumophila
subsp. pneumophila str. Philadelphia 1]
gi|148281094|gb|ABQ55182.1| lysine tRNA synthetase, heat inducible [Legionella pneumophila str.
Corby]
gi|295649269|gb|ADG25116.1| lysyl-tRNA synthetase, class II [Legionella pneumophila 2300/99
Alcoy]
gi|307610477|emb|CBX00049.1| hypothetical protein LPW_18041 [Legionella pneumophila 130b]
gi|364508453|gb|AEW51977.1| lysine tRNA synthetase, heat inducible [Legionella pneumophila
subsp. pneumophila ATCC 43290]
Length = 496
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 239/442 (54%), Positives = 332/442 (75%), Gaps = 17/442 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYI-SNEIIGKNLYTDFKNYDIGDIIGAKGTLF 59
+L+R+MGK SF +QD SG +IQ+Y+ SN++ ++Y FK++D+GDI+G +G LF
Sbjct: 70 VLRRIMGKASFFHIQDVSG-----RIQVYLRSNDL--PDIYEQFKHWDLGDIVGVQGELF 122
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KTNTGEL+I ++L+TKSLRPLP+KF L++QE+KYR RY+DLI NE++RK F R+
Sbjct: 123 KTNTGELTINAEHVELLTKSLRPLPDKFHGLADQELKYRKRYVDLIANEDSRKTFLIRSH 182
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+I + R FM+ N F+EVETP++H PGGA+A+PF+THHN+L+M M+LRIAPELYLKRL++
Sbjct: 183 LIKAFREFMDDNHFLEVETPMMHPIPGGALARPFVTHHNTLDMTMYLRIAPELYLKRLVV 242
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF +++EIN+NFRNEGIS RHNPEFTM+EFY AY +Y LM FTE++ + + T
Sbjct: 243 GGFERVYEINRNFRNEGISTRHNPEFTMLEFYQAYADYNDLMNFTEQLFHYLCDKVLATR 302
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+I+YQG+++DF+K FE+L++ EAI KY P L+ ++ L + + + L
Sbjct: 303 QIEYQGQVIDFNKPFERLSVKEAILKYHPDIKAQQLETVEGCRTLLNDLGLPYKETDGLG 362
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
LQ++LFEET E +L+ PT+IT YPTEISPLAR+S+ N +T+RFE FI G EI
Sbjct: 363 K-----LQIILFEETVEHQLFQPTFITEYPTEISPLARRSDT-NPEVTDRFEFFIAGREI 416
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSS-YYDTDYIHALEYGMPPASGCGIGVDR 418
ANGFSELND E+Q+ RF+ Q++ K+ G+L + ++D+DYI ALEYG+PP +G GIG+DR
Sbjct: 417 ANGFSELNDAEDQAERFRKQVEEKD--AGDLEAMHFDSDYIEALEYGLPPTAGEGIGIDR 474
Query: 419 LIMLLTNSKNIRDVILFPHLRN 440
L+ML TNS++IRDVILFPHLR
Sbjct: 475 LVMLFTNSQSIRDVILFPHLRQ 496
>gi|257453433|ref|ZP_05618728.1| lysyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
gi|257449185|gb|EEV24133.1| lysyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
Length = 510
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 238/450 (52%), Positives = 326/450 (72%), Gaps = 27/450 (6%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF+ + D +G +IQ Y+S +G+ +Y DFK +DIGDIIG G +F+
Sbjct: 79 MLKRVMGKASFVTIADMTG-----RIQAYVSKNDLGEEIYNDFKTWDIGDIIGVTGYVFR 133
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TNTGELS+ + ++L+TKSLRPLP+KF LS+ E +YR R++DL+ NE++R F R+++
Sbjct: 134 TNTGELSVHATEVQLLTKSLRPLPDKFHGLSDTEARYRSRHLDLMTNEDSRNAFIIRSKV 193
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+ IR +M +MEVETP++H PGGA+A+PF+THHN+L+M +FLRIAPELYLKRL++G
Sbjct: 194 IAGIREYMLNERYMEVETPMMHVIPGGAVARPFVTHHNALDMPLFLRIAPELYLKRLVVG 253
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+S RHNPEFTMIEFY AY +Y LMK TE M +K+ D +GTT+
Sbjct: 254 GFERVFEINRNFRNEGVSARHNPEFTMIEFYQAYADYEDLMKLTENMFEKLANDILGTTE 313
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
IDYQG + F FE+L + +AI+KY ++ + ++ +L K N
Sbjct: 314 IDYQGEAISFKAPFERLPMTKAIEKYADNFDMSKIADRDYLADYAK------------NV 361
Query: 301 LKKDI--------LQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFEL 352
LK+D+ LQ ++FEET ETKL PT++T YP E SPLAR+ N +N+ IT+RFEL
Sbjct: 362 LKQDVKDIFGIGKLQTIIFEETAETKLRQPTFVTEYPAETSPLARR-NDDNSEITDRFEL 420
Query: 353 FIIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGC 412
FI G EIANGFSELNDP +Q+ RFK Q+ K+ + E + +YD ++I AL YG+PP +G
Sbjct: 421 FIGGREIANGFSELNDPIDQAERFKQQVAEKDAGDDE-AMHYDAEFIEALSYGLPPTAGE 479
Query: 413 GIGVDRLIMLLTNSKNIRDVILFPHLRNEN 442
GIG+DRL+ML TN+ +IRDVILFPH+R ++
Sbjct: 480 GIGIDRLVMLFTNAPSIRDVILFPHMRRKD 509
>gi|54297690|ref|YP_124059.1| hypothetical protein lpp1741 [Legionella pneumophila str. Paris]
gi|81370415|sp|Q5X4D5.1|SYK_LEGPA RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|53751475|emb|CAH12893.1| hypothetical protein lpp1741 [Legionella pneumophila str. Paris]
Length = 496
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 239/442 (54%), Positives = 332/442 (75%), Gaps = 17/442 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYI-SNEIIGKNLYTDFKNYDIGDIIGAKGTLF 59
+L+R+MGK SF +QD SG +IQ+Y+ SN++ ++Y FK++D+GDI+G +G LF
Sbjct: 70 VLRRIMGKASFFHIQDVSG-----RIQVYLRSNDL--PDVYEQFKHWDLGDIVGVQGELF 122
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KTNTGEL+I ++L+TKSLRPLP+KF L++QE+KYR RY+DLI NE++RK F R+
Sbjct: 123 KTNTGELTINAEYVELLTKSLRPLPDKFHGLADQELKYRKRYVDLIANEDSRKTFLIRSH 182
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+I + R FM+ N F+EVETP++H PGGA+A+PF+THHN+L+M M+LRIAPELYLKRL++
Sbjct: 183 LIKAFREFMDDNHFLEVETPMMHPIPGGALARPFVTHHNTLDMTMYLRIAPELYLKRLVV 242
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF +++EIN+NFRNEGIS RHNPEFTM+EFY AY +Y LM FTE++ + + T
Sbjct: 243 GGFERVYEINRNFRNEGISTRHNPEFTMLEFYQAYADYNDLMNFTEQLFHYLCDKVLATR 302
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+I+YQG+++DF+K FE+L++ EAI KY P L+ ++ L + + + L
Sbjct: 303 QIEYQGQVIDFNKPFERLSVKEAILKYHPDIKAQQLETLEGCRTLLNDLGLPYKETDGLG 362
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
LQ++LFEET E +L+ PT+IT YPTEISPLAR+S+ N +T+RFE FI G EI
Sbjct: 363 K-----LQIILFEETVEHQLFQPTFITEYPTEISPLARRSDT-NPEVTDRFEFFIAGREI 416
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSS-YYDTDYIHALEYGMPPASGCGIGVDR 418
ANGFSELND E+Q+ RF+ Q++ K+ G+L + ++D+DYI ALEYG+PP +G GIG+DR
Sbjct: 417 ANGFSELNDAEDQAERFRKQVEEKD--AGDLEAMHFDSDYIEALEYGLPPTAGEGIGIDR 474
Query: 419 LIMLLTNSKNIRDVILFPHLRN 440
L+ML TNS++IRDVILFPHLR
Sbjct: 475 LVMLFTNSQSIRDVILFPHLRQ 496
>gi|397664231|ref|YP_006505769.1| lysine tRNA synthetase, inducible [Legionella pneumophila subsp.
pneumophila]
gi|395127642|emb|CCD05841.1| lysine tRNA synthetase, inducible [Legionella pneumophila subsp.
pneumophila]
Length = 496
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 238/442 (53%), Positives = 331/442 (74%), Gaps = 17/442 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYI-SNEIIGKNLYTDFKNYDIGDIIGAKGTLF 59
+L+R+MGK SF +QD SG +IQ+Y+ SN++ ++Y FK++D+GDI+G +G LF
Sbjct: 70 VLRRIMGKASFFHIQDVSG-----RIQVYLRSNDL--PDVYEQFKHWDLGDIVGVQGELF 122
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KTNTGEL+I ++L+TKSLRPLP+KF L++QE+KYR RY+DLI NE++RK F R+
Sbjct: 123 KTNTGELTINAEHVELLTKSLRPLPDKFHGLADQELKYRKRYVDLIANEDSRKTFLMRSH 182
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+I + R FM+ N F+EVETP++H PGGA+A+PF+THHN+L+M M+LRIAPELYLKRL++
Sbjct: 183 LIKAFREFMDDNHFLEVETPMMHPIPGGALARPFVTHHNTLDMTMYLRIAPELYLKRLVV 242
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF +++EIN+NFRNEGIS RHNPEFTM+EFY AY +Y LM FTE++ + +
Sbjct: 243 GGFERVYEINRNFRNEGISTRHNPEFTMLEFYQAYADYNDLMNFTEQLFHYLCDKVLAAR 302
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+I+YQG+++DF+K FE+L++ EAI KY P L+ ++ L + + + L
Sbjct: 303 QIEYQGQVIDFNKPFERLSVKEAILKYHPDIKAQQLETVEGCRTLLNDLGLPYKETDGLG 362
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
LQ++LFEET E +L+ PT+IT YPTEISPLAR+S+ N +T+RFE FI G EI
Sbjct: 363 K-----LQIILFEETVEHQLFQPTFITEYPTEISPLARRSDT-NPEVTDRFEFFIAGREI 416
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSS-YYDTDYIHALEYGMPPASGCGIGVDR 418
ANGFSELND E+Q+ RF+ Q++ K+ G+L + ++D+DYI ALEYG+PP +G GIG+DR
Sbjct: 417 ANGFSELNDAEDQAERFRKQVEEKD--AGDLEAMHFDSDYIEALEYGLPPTAGEGIGIDR 474
Query: 419 LIMLLTNSKNIRDVILFPHLRN 440
L+ML TNS++IRDVILFPHLR
Sbjct: 475 LVMLFTNSQSIRDVILFPHLRQ 496
>gi|375107429|ref|ZP_09753690.1| lysyl-tRNA synthetase (class II) [Burkholderiales bacterium
JOSHI_001]
gi|374668160|gb|EHR72945.1| lysyl-tRNA synthetase (class II) [Burkholderiales bacterium
JOSHI_001]
Length = 505
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 240/442 (54%), Positives = 313/442 (70%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF LQD S + G+IQL+++ + +G Y FK+ D+GDI+G +G LF+
Sbjct: 72 MLKRVMGKASFGTLQDGSFGKTAGRIQLFVTKDNVGDASYDGFKHMDLGDIVGGEGVLFR 131
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+KV+SL+L+TKSLRPLP+KF +++QE KYR RY+DL+ +E R F R++
Sbjct: 132 TKTGELSVKVNSLRLLTKSLRPLPDKFHGMTDQEQKYRQRYVDLMTDEVARARFVARSKA 191
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+SSIR+FM ++ F+EVETPILH PGGA AKPF+THHN+L+ +MFLRIAPELYLKRLI+G
Sbjct: 192 VSSIRNFMVEHGFLEVETPILHPIPGGANAKPFVTHHNALDQQMFLRIAPELYLKRLIVG 251
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN++FRNEGIS RHNPEFTM+EFYAAY N+ LM FTE +++ G+
Sbjct: 252 GFERVFEINRSFRNEGISVRHNPEFTMMEFYAAYWNHHDLMDFTENVLRHAARQATGSAT 311
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ Y G+ +D + F +LT+ +++ KY E + + L ++L+ + + L
Sbjct: 312 LSYAGKTVDLDQPFARLTVRDSLVKYA-GLTETEAADAQVLHAKLRALGEEPPAHWTLAE 370
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQ LFE E KLW+PT+I YP E+SPLAR S+ N ITERFELFI G E
Sbjct: 371 -----LQFGLFEAAVEDKLWDPTFIIEYPVEVSPLARASDA-NPAITERFELFITGREYG 424
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RF Q K E E + YYD D+I ALEYGMPP GCGIG+DRL+
Sbjct: 425 NGFSELNDAEDQAARFNAQAKNK-EAGDEEAMYYDADFIRALEYGMPPTGGCGIGIDRLV 483
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S +IRDVILFP LR E
Sbjct: 484 MLLTDSPSIRDVILFPALRREG 505
>gi|307129434|ref|YP_003881450.1| lysyl-tRNA synthetase [Dickeya dadantii 3937]
gi|306526963|gb|ADM96893.1| Lysyl-tRNA synthetase (class II) [Dickeya dadantii 3937]
Length = 505
Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust.
Identities = 236/440 (53%), Positives = 318/440 (72%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY+S + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVSRDDLPEGVYNEQFKKWDLGDIVGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L++QE +YR RY+DLI NE +R F+ R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANEESRHTFRVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM DFMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 IMAGIRQFMVGRDFMEVETPMMQVIPGGAAARPFITHHNALDIDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEG+SPRHNPEFTM+E Y AY +Y L++ TE + + + D +G T
Sbjct: 250 GGFERVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGAT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y ++ DF K FEKLT+ EAIKKY P+ N DL + K+ + I K + L
Sbjct: 310 EVQYGDQVFDFGKPFEKLTMREAIKKYRPETNMADLDSFDAAKAIAESIGIKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEET E L PT+IT YP E+SPLAR+ N +N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEETAEAHLIQPTFITEYPAEVSPLARR-NDQNPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF++Q+ K+ + E + +YD DY+ ALE+G+PP +G GIG+DRL
Sbjct: 424 GNGFSELNDAEDQAQRFQDQVAAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRL 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|383760007|ref|YP_005438993.1| lysyl-tRNA synthetase LysS [Rubrivivax gelatinosus IL144]
gi|381380677|dbj|BAL97494.1| lysyl-tRNA synthetase LysS [Rubrivivax gelatinosus IL144]
Length = 500
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 235/441 (53%), Positives = 314/441 (71%), Gaps = 13/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK F LQD + G+IQLY++ + +G FK +D+GDI+G +GTLF+
Sbjct: 72 MLKRVMGKACFATLQD-----ATGRIQLYVTQDAVGPETLAAFKRWDLGDILGCEGTLFR 126
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELSIK + ++L+TKSLRPLP+KF +++QE KYR RY+DL+ ++ R F R++
Sbjct: 127 TKTGELSIKATRVRLLTKSLRPLPDKFHGMTDQEQKYRQRYVDLMTDDAARARFVARSKA 186
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+SSIR +M ++ F+EVETP+LH PGGA AKPF+THHN+L+ +MFLRIAPELYLKRL++G
Sbjct: 187 VSSIRQYMVEHGFLEVETPMLHPIPGGANAKPFVTHHNALDQEMFLRIAPELYLKRLLVG 246
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEGIS RHNPEFTM+EFYAAY + LM FTE++++ G+ K
Sbjct: 247 GFERVFEINRNFRNEGISVRHNPEFTMMEFYAAYWTHHDLMDFTEQVLRHAARAATGSAK 306
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ Y GR +D + F +L++ ++ + +E + + L ++LK++ + L
Sbjct: 307 LSYAGREVDLDQPFARLSVRNSLVVHA-GVSESEADDAAALHAKLKELGEEPPAHWTLAE 365
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQ LFE E KLW PT+I +YP E+SPLAR S+ N +ITERFELFI G E A
Sbjct: 366 -----LQFGLFEAAVEEKLWQPTFIVDYPVEVSPLARASD-SNPSITERFELFITGREYA 419
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RF+ Q+ K+ E + YYD D+I ALEYGMPPA GCGIG+DRLI
Sbjct: 420 NGFSELNDAEDQAARFQAQVANKD-AGDEEAMYYDADFIRALEYGMPPAGGCGIGIDRLI 478
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S +IRDVILFP LR E
Sbjct: 479 MLLTDSPSIRDVILFPALRRE 499
>gi|242240699|ref|YP_002988880.1| lysyl-tRNA synthetase [Dickeya dadantii Ech703]
gi|242132756|gb|ACS87058.1| lysyl-tRNA synthetase [Dickeya dadantii Ech703]
Length = 505
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 234/440 (53%), Positives = 320/440 (72%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY+S + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVSRDDLPEGVYNEQFKKWDLGDILGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L++QE +YR RY+DLI N+++R+ F+ R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANDDSRQTFRVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM DFMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAGIRQFMVGRDFMEVETPMMQVIPGGASARPFITHHNALDIDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEG+SPRHNPEFTM+E Y AY +Y L++ TE + + + D +GTT
Sbjct: 250 GGFERVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y + DF K FEKLT+ EAIKKY P+ N DL + K+ + I K + L
Sbjct: 310 EVPYGDQTFDFGKPFEKLTMREAIKKYRPETNLADLDSFDAAKAIAESIGVKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FE+ E L PT+IT YP E+SPLAR+++I N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEDVAEAHLIQPTFITEYPAEVSPLARRNDI-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF++Q+ K+ + E + +YD DY+ ALE+G+PP +G GIG+DRL
Sbjct: 424 GNGFSELNDAEDQAQRFQDQVAAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRL 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|388456135|ref|ZP_10138430.1| lysyl-tRNA ligase [Fluoribacter dumoffii Tex-KL]
Length = 497
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 235/441 (53%), Positives = 332/441 (75%), Gaps = 15/441 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
+L+R+MGK SF +QD SG +IQ+YI + + Y +FK++D+GDI+G +G LFK
Sbjct: 71 VLRRIMGKASFFHIQDFSG-----RIQVYIRANDLPEQ-YEEFKHWDLGDIVGVQGELFK 124
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TNTGEL++ SL+L+TKSLRPLP+KF L++QE+KYR RY+DLI N+ +R F R+++
Sbjct: 125 TNTGELTVHADSLELLTKSLRPLPDKFHGLADQEVKYRKRYVDLIANDESRLTFLTRSRL 184
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I + R FM+KN F+EVETP++H PGGA+A+PF+THH++L+M M+LRIAPELYLKRL++G
Sbjct: 185 IQAFRQFMDKNYFLEVETPMMHPIPGGAMARPFVTHHHTLDMTMYLRIAPELYLKRLVVG 244
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF +++EIN+NFRNEGIS RHNPEFTM+EFY AY +Y LM FTE+++ + + +
Sbjct: 245 GFERVYEINRNFRNEGISTRHNPEFTMVEFYQAYADYQDLMNFTEELLHYLCDTVMEKRQ 304
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I+YQG+++DF+K F ++T+ EAI Y P+ L+N + ++ L++ F + L
Sbjct: 305 IEYQGQIIDFNKPFTRMTVKEAILHYHPEITAQQLENVVSCRAILQEKGFPFKETDGLGK 364
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQ++LFEET E +L+ PT+IT YPTEISPLAR+S+ + +T+RFE FI G EIA
Sbjct: 365 -----LQIILFEETVEHQLFQPTFITGYPTEISPLARRSD-SDPEVTDRFEFFIAGREIA 418
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSS-YYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF+ Q++ K+ G+L + ++D+DYI ALEYG+PP +G GIG+DRL
Sbjct: 419 NGFSELNDAEDQAERFRKQVEEKD--AGDLEAMHFDSDYIEALEYGLPPTAGEGIGIDRL 476
Query: 420 IMLLTNSKNIRDVILFPHLRN 440
+ML TNS++IRDVILFPHLR
Sbjct: 477 VMLFTNSQSIRDVILFPHLRQ 497
>gi|296104551|ref|YP_003614697.1| lysyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
13047]
gi|392980549|ref|YP_006479137.1| lysyl-tRNA ligase [Enterobacter cloacae subsp. dissolvens SDM]
gi|295059010|gb|ADF63748.1| lysyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
13047]
gi|392326482|gb|AFM61435.1| lysyl-tRNA ligase [Enterobacter cloacae subsp. dissolvens SDM]
Length = 505
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 239/440 (54%), Positives = 317/440 (72%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY+S + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVSRDDLPEGIYNEQFKKWDLGDILGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +RK FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRKTFKIRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM DFMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 IMAGIRQFMVNRDFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF+++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +GTT
Sbjct: 250 GGFDRVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y + DF K FEKLT+ EAIKKY P+ N DL N K+ + I K + L
Sbjct: 310 QVPYGEEVFDFGKPFEKLTMREAIKKYRPETNMADLDNFDSAKAIAESIGIKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR+ N EN IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARR-NDENPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF++Q+D K + E + ++D DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFQDQVDAKAAGDDE-AMFFDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|401765097|ref|YP_006580104.1| lysyl-tRNA ligase [Enterobacter cloacae subsp. cloacae ENHKU01]
gi|400176631|gb|AFP71480.1| lysyl-tRNA ligase [Enterobacter cloacae subsp. cloacae ENHKU01]
Length = 505
Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust.
Identities = 239/440 (54%), Positives = 317/440 (72%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY+S + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVSRDDLPEGIYNEQFKKWDLGDILGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +RK FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRKTFKIRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM DFMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 IMAGIRQFMVNRDFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF+++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +GTT
Sbjct: 250 GGFDRVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y + DF K FEKLT+ EAIKKY P+ N DL N K+ + I K + L
Sbjct: 310 QVPYGEEVFDFGKPFEKLTMREAIKKYRPETNMADLDNFDSAKAIAESIGIKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR+ N EN IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARR-NDENPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF++Q+D K + E + ++D DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFQDQVDAKAAGDDE-AMFFDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|118602601|ref|YP_903816.1| lysyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|259511534|sp|A1AWN8.1|SYK_RUTMC RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|118567540|gb|ABL02345.1| lysyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 497
Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust.
Identities = 248/442 (56%), Positives = 321/442 (72%), Gaps = 14/442 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
MLKRVMGK SF+ +QD+SG +IQL+I+ + + +N Y + FK DIGDI+GA G LF
Sbjct: 66 MLKRVMGKASFVHVQDSSG-----QIQLFITRDELPENFYNEQFKKLDIGDIVGATGVLF 120
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT+ GELSI++S +KL+TKSLRPLP KF LS+QE +YR RY+DLI+N+ +R FK+R+Q
Sbjct: 121 KTSVGELSIRISDIKLLTKSLRPLPEKFHGLSDQETRYRQRYVDLIMNKTSRNTFKRRSQ 180
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+S IR+F +DF+EVETP+L PGGAIAK F THHN+L+M M+LRIAPELYLKRLI+
Sbjct: 181 IVSYIRNFFNNHDFIEVETPMLQTIPGGAIAKSFETHHNALDMPMYLRIAPELYLKRLIV 240
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GG +++FE+++NFRNEG+S RHNPEFTMIEFY AY Y LM TEK+ + I D G+
Sbjct: 241 GGMDRVFEVSRNFRNEGLSTRHNPEFTMIEFYQAYATYHDLMNLTEKLFRGIAFDVYGSA 300
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
I YQG DFSK FE +++ ++I +Y P +L + KKI K ++
Sbjct: 301 NIHYQGNDFDFSKPFECISVFDSILQYNPNLTATNLN-----QDNAKKIAEKLG-IQVKE 354
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
N +Q+ +FE T E KL PT+IT YPTE+SPLAR N +N IT+RFELFI G EI
Sbjct: 355 NWGLGKIQIEIFEATVEEKLIQPTFITEYPTEVSPLAR-CNDDNPFITDRFELFIGGREI 413
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
ANGFSELND E Q+ RFK Q++ K+ + E + YD DYI ALEYGMPP +G GIG+DRL
Sbjct: 414 ANGFSELNDAENQAERFKKQVEEKDASDDE-AMQYDADYIRALEYGMPPTAGEGIGIDRL 472
Query: 420 IMLLTNSKNIRDVILFPHLRNE 441
+ML TNS +IRDV+LFPH+R+E
Sbjct: 473 VMLFTNSPSIRDVLLFPHMRSE 494
>gi|332525509|ref|ZP_08401667.1| lysyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
gi|332108776|gb|EGJ10000.1| lysyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
Length = 492
Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust.
Identities = 234/441 (53%), Positives = 313/441 (70%), Gaps = 13/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK F LQD + G+IQLY++ + +G FK +D+GDI+G +GTLF+
Sbjct: 64 MLKRVMGKACFATLQD-----ATGRIQLYVTQDAVGPETLAAFKRWDLGDILGCEGTLFR 118
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELSIK ++++L+TKSLRPLP+KF +++QE KYR RY+DL+ ++ R F R++
Sbjct: 119 TKTGELSIKATNVRLLTKSLRPLPDKFHGMTDQEQKYRQRYVDLMTDDAARSRFVARSKA 178
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+SSIR +M ++ F+EVETP+LH PGGA AKPF+THHN+L+ +MFLRIAPELYLKRL++G
Sbjct: 179 VSSIRQYMVEHGFLEVETPMLHPIPGGANAKPFVTHHNALDQEMFLRIAPELYLKRLLVG 238
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEGIS RHNPEFTM+EFYAAY + LM FTE++++ G+
Sbjct: 239 GFERVFEINRNFRNEGISVRHNPEFTMMEFYAAYWTHHDLMDFTEQVLRHAARAATGSAT 298
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ Y GR +D ++ F +L++ ++ + +E + + L + LK + + L
Sbjct: 299 LSYAGREVDLAQPFARLSVRNSLVVHA-GVSESEADDAAALHARLKALGEEPPAHWTLAE 357
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQ LFE E KLW PT+I +YP E+SPLAR S+ N +ITERFELFI G E A
Sbjct: 358 -----LQFGLFEAAVEDKLWQPTFIIDYPVEVSPLARASD-SNPSITERFELFITGREYA 411
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RF+ Q+ K+ E + YYD D+I ALEYGMPPA GCGIG+DRLI
Sbjct: 412 NGFSELNDAEDQAARFQAQVANKD-AGDEEAMYYDADFIRALEYGMPPAGGCGIGIDRLI 470
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S +IRDVILFP LR E
Sbjct: 471 MLLTDSPSIRDVILFPALRRE 491
>gi|440232229|ref|YP_007346022.1| lysyl-tRNA synthetase (class II) [Serratia marcescens FGI94]
gi|440053934|gb|AGB83837.1| lysyl-tRNA synthetase (class II) [Serratia marcescens FGI94]
Length = 506
Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust.
Identities = 236/440 (53%), Positives = 318/440 (72%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLAEGVYNEQFKKWDLGDILGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L++QE +YR RY+DLI NE +R FK R++
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANEESRHTFKVRSR 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+S IR+FM DFMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 IMSGIRNFMVGRDFMEVETPMMQVIPGGASARPFITHHNALDIDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEG+SPRHNPEFTM+E Y AY +Y L++ TE + + + D +GTT
Sbjct: 250 GGFERVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
K+ Y DF K FEKLT+ EAIKKY P+ + DL + K+ + I K + L
Sbjct: 310 KVPYGDEEFDFGKPFEKLTMREAIKKYRPETDMADLDDFDKAKAIAESIGIKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEET E+ L PT+IT YP E+SPLAR+ N EN IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEETAESHLIQPTFITEYPAEVSPLARR-NDENPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q+ K+ + E + +YD DY+ +LE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFADQVAAKDAGDDE-AMFYDEDYVTSLEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|335044432|ref|ZP_08537457.1| lysyl-tRNA synthetase [Methylophaga aminisulfidivorans MP]
gi|333787678|gb|EGL53562.1| lysyl-tRNA synthetase [Methylophaga aminisulfidivorans MP]
Length = 497
Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust.
Identities = 231/441 (52%), Positives = 322/441 (73%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M KRVMGK SF ++D SG IQLY++ + + + +Y FK++D+GDIIGA+GTLF+
Sbjct: 69 MTKRVMGKASFATIRDMSG-----NIQLYVARDELPEGVYAQFKSWDLGDIIGAEGTLFR 123
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T GELS+ V S++L+TKSLRPLP KF LS+QE +YR RY+DLI+NE +R VF+ RT+I
Sbjct: 124 TQKGELSVHVDSIQLLTKSLRPLPEKFHGLSDQETRYRQRYVDLIMNEASRDVFRIRTKI 183
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+ +R ++ D++EVETP++ PGGA A+PF THHN+L+M ++LRIAPELYLKRL++G
Sbjct: 184 VDGVRRYLMSKDYLEVETPMMQAIPGGATARPFTTHHNALDMGLYLRIAPELYLKRLVVG 243
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y LM TE M++ I D +GTT+
Sbjct: 244 GFERVFEINRNFRNEGLSTRHNPEFTMVEFYQAYADYHELMDLTEDMLRTITQDVLGTTQ 303
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQG +DF+K F ++T+ E+I + P+ L + ++ K ++ L
Sbjct: 304 VHYQGLDIDFAKPFTRMTVKESILHFNPELKAEQLDDIESARAIAKSLDIALKDSYGLGK 363
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
+Q+ +FE+T E +L +PT+IT YPTE+SPLAR+ N + +T+RFE F+ G EIA
Sbjct: 364 -----VQIEIFEKTVEHRLMDPTFITAYPTEVSPLARR-NDNDPFVTDRFEFFVGGREIA 417
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RFK Q++ K+ + E + +YD DYI ALEYGMPP +G GIG+DRL+
Sbjct: 418 NGFSELNDAEDQAERFKAQVEEKDAGDDE-AMHYDADYIRALEYGMPPTAGEGIGIDRLV 476
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S +IRDV+LFPH+R E
Sbjct: 477 MLLTDSPSIRDVLLFPHMRPE 497
>gi|171056979|ref|YP_001789328.1| lysyl-tRNA synthetase [Leptothrix cholodnii SP-6]
gi|170774424|gb|ACB32563.1| lysyl-tRNA synthetase [Leptothrix cholodnii SP-6]
Length = 514
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 230/442 (52%), Positives = 319/442 (72%), Gaps = 9/442 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK F LQD S D N +IQLYI+ + +G L FK++D+GDI+GA GTLF+
Sbjct: 82 MLKRVMGKACFATLQDGSA-DGNPRIQLYITQDNVGAELLAAFKHWDLGDILGATGTLFR 140
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T +GELSIKV+ L+L+TKSLRP+P+K +++QE KYR RY+DL+ +++ R+ F+ R++
Sbjct: 141 TKSGELSIKVTGLRLLTKSLRPMPDKHHGMTDQEQKYRQRYVDLMTDDSARERFRARSKA 200
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
++SIR FM ++ F+EVETP+LH PGGA AKPF+THHN+L+ +MFLRIAPELYLKRL++G
Sbjct: 201 VASIRGFMLEHQFLEVETPMLHPIPGGANAKPFVTHHNALDQEMFLRIAPELYLKRLVVG 260
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEGIS RHNPEFTM+EFYAAY N+ LM FTE++++ G+ +
Sbjct: 261 GFERVFEINRNFRNEGISVRHNPEFTMMEFYAAYWNHHDLMDFTEQLLRHAATQATGSAR 320
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ Y G+ + + F +L++ +++ + E + + + ++L + ++ +
Sbjct: 321 VSYAGKPVHLDEPFARLSVRDSLVVHA-GLTEAEADDAAVIHAKLTSLG-----EEPPKH 374
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
K LQ LFE E KLW PT+I +YP E+SPLAR S+ N +ITERFELFI G E
Sbjct: 375 WKLAALQFGLFEAVVEEKLWQPTFIIDYPVEVSPLARASDA-NPSITERFELFITGREFG 433
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RF++Q+ K+ E + +YD D+I ALEYGMPP GCGIG+DRL+
Sbjct: 434 NGFSELNDAEDQAARFQSQVANKD-AGDEEAMFYDADFIRALEYGMPPTGGCGIGIDRLM 492
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S +IRDV+LFP LR E
Sbjct: 493 MLLTDSVSIRDVVLFPALRREG 514
>gi|395236357|ref|ZP_10414554.1| lysyl-tRNA ligase [Enterobacter sp. Ag1]
gi|394728988|gb|EJF29008.1| lysyl-tRNA ligase [Enterobacter sp. Ag1]
Length = 505
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 236/440 (53%), Positives = 317/440 (72%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY+S + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVSRDDLAEGIYNEQFKKWDLGDILGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L++QE +YR RY+DLI NE +R FK R++
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANEESRNTFKVRSK 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM DFMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 IMAGIRQFMVGRDFMEVETPMMQVIPGGASARPFITHHNALDIDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF+++FEIN+NFRNEGISPRHNPEFTM+E Y AY +Y L++ TE + + + D +GTT
Sbjct: 250 GGFDRVFEINRNFRNEGISPRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y DF K FEKLT+ EAIKK+ + + DL N K+ + I K + L
Sbjct: 310 EVQYGEETFDFGKPFEKLTMREAIKKHRQETDLADLDNFDSAKAIAESIGIKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E+ L PT+IT YP E+SPLAR+ N EN IT+RFE FI G EI
Sbjct: 370 RVVTEI-----FEEVAESHLIQPTFITEYPAEVSPLARR-NDENPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF++Q+D K + E + ++D DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFQDQVDAKAAGDDE-AMFFDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP LR
Sbjct: 483 VMLFTNSHTIRDVILFPALR 502
>gi|386826443|ref|ZP_10113550.1| lysyl-tRNA synthetase (class II) [Beggiatoa alba B18LD]
gi|386427327|gb|EIJ41155.1| lysyl-tRNA synthetase (class II) [Beggiatoa alba B18LD]
Length = 507
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 233/441 (52%), Positives = 329/441 (74%), Gaps = 16/441 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M +R+MGK +F+ +QD SG ++QLY+ E + + Y +FK++DIGDIIG G +FK
Sbjct: 77 MTRRIMGKAAFVHIQDMSG-----RMQLYLKKEELPEGTYEEFKHWDIGDIIGVHGVMFK 131
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+KVSS++L++K+LRPLP KF L++QE YR RY+DLI+NE TR FK R+++
Sbjct: 132 TKTGELSVKVSSIRLLSKALRPLPEKFHGLTDQETCYRQRYLDLIMNEKTRTTFKTRSKV 191
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+ IR+F+ + DF+EVETP++H PGGA A+PF+THHN+L+M ++LRIAPELYLKRL++G
Sbjct: 192 IAYIRNFLIEKDFLEVETPMMHVIPGGAAARPFVTHHNALDMPLYLRIAPELYLKRLVVG 251
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FE+N+NFRNEG+S RHNPEFTM+EFY AY +Y LM TE+ + + +G+T
Sbjct: 252 GFERVFELNRNFRNEGVSTRHNPEFTMLEFYQAYADYTHLMDLTEEFFRGLAESLLGSTL 311
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKK--INPKFNQKKIL 298
+ YQ + DF K FE++++ AI KY P + DL++ +++ K+ I+P N
Sbjct: 312 VPYQNEVYDFGKPFERISVKNAILKYNPDIRQSDLEDLNTIRALAKRLDIHPHAN----- 366
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
+ + K +Q+ +F++T E L +PT++T YPTEISPLAR N ++ +IT+RFELFI G E
Sbjct: 367 DGVGK--IQIEIFDKTVEHLLKDPTFVTEYPTEISPLAR-MNDKDPSITDRFELFIGGRE 423
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IANGFSELNDPE+Q+ RF+ Q++ K + E + +YD DYI ALEYG+PP +G GIG+DR
Sbjct: 424 IANGFSELNDPEDQAERFRQQVEAK-QAGDEEAMHYDADYIQALEYGLPPTAGEGIGIDR 482
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTN +IRDV+LFPHLR
Sbjct: 483 LVMLLTNQPSIRDVLLFPHLR 503
>gi|381150408|ref|ZP_09862277.1| lysyl-tRNA synthetase (class II) [Methylomicrobium album BG8]
gi|380882380|gb|EIC28257.1| lysyl-tRNA synthetase (class II) [Methylomicrobium album BG8]
Length = 499
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 233/443 (52%), Positives = 323/443 (72%), Gaps = 13/443 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +RVMGK SF +QD SG KIQLY++ + + + Y + FK +DIGDI+GA+G LF
Sbjct: 68 MTRRVMGKASFCHIQDMSG-----KIQLYVTRDSLPGDFYNEQFKKWDIGDIVGAEGVLF 122
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KTN GELS+KV ++L+TKSLRPLP KF +++QEIKYR RY+DLI++E++RK F R++
Sbjct: 123 KTNAGELSVKVDDIRLLTKSLRPLPEKFHGIADQEIKYRQRYLDLIMSESSRKTFLLRSR 182
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR F+ K DF+EVETP++ PGGA A+PF+THHN+L+M++FLRIAPELYLKRL++
Sbjct: 183 IVAYIREFLIKRDFLEVETPMMQAIPGGATARPFVTHHNALDMQLFLRIAPELYLKRLVV 242
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEG+S RHNPEFTM+EFY AY Y LM TE M++ + + +G T
Sbjct: 243 GGFERVFEINRNFRNEGLSTRHNPEFTMLEFYQAYAEYGDLMDLTEAMLRGLAEEVVGQT 302
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
I YQG DF K FE++T+ E+I ++ P D+ N+ + KK+N L
Sbjct: 303 LITYQGEEYDFGKPFERMTVFESILRFNPDLKASDIDNREGAVAVCKKLNLPVKDGYGLG 362
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
LQ+ +FE+T E +L NPT+IT YP E+SPLAR+ N ++ IT+RFE F+ G EI
Sbjct: 363 K-----LQIEIFEKTVENRLMNPTFITAYPVEVSPLARR-NDQDPFITDRFEFFVGGREI 416
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
ANGF+ELND E+Q+ RF+ Q++ K E + + ++D DYI ALE+GMPP +G GIG+DRL
Sbjct: 417 ANGFTELNDAEDQAARFQKQVEEK-EAGDDEAMHFDADYIVALEHGMPPTAGEGIGIDRL 475
Query: 420 IMLLTNSKNIRDVILFPHLRNEN 442
+ML ++ +IRDV+LFPH+R +N
Sbjct: 476 VMLFADAPSIRDVLLFPHMRAKN 498
>gi|419960363|ref|ZP_14476403.1| lysyl-tRNA ligase [Enterobacter cloacae subsp. cloacae GS1]
gi|388604748|gb|EIM33978.1| lysyl-tRNA ligase [Enterobacter cloacae subsp. cloacae GS1]
Length = 505
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 238/440 (54%), Positives = 317/440 (72%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY+S + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVSRDDLPEGIYNEQFKKWDLGDILGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +RK FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRKTFKIRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM DFMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 IMAGIRQFMVNRDFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF+++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +GTT
Sbjct: 250 GGFDRVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y + DF K FEKLT+ EAIKKY P+ N DL N K+ + I K + L
Sbjct: 310 QVPYGEEVFDFGKPFEKLTMREAIKKYRPETNMADLDNFDSAKAIAESIGIKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR+ N EN IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARR-NDENPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF++Q++ K + E + ++D DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFQDQVNAKAAGDDE-AMFFDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|401675177|ref|ZP_10807171.1| lysyl-tRNA synthetase [Enterobacter sp. SST3]
gi|400217634|gb|EJO48526.1| lysyl-tRNA synthetase [Enterobacter sp. SST3]
Length = 505
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 237/440 (53%), Positives = 317/440 (72%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY+S + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVSRDDLPEGIYNEQFKKWDLGDILGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L ++E +YR RY+DLI N+ +RK FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDKEARYRQRYLDLISNDESRKTFKIRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM DFMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 IMAGIRQFMVNRDFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF+++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +GTT
Sbjct: 250 GGFDRVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y + DF K FEKLT+ EAIKKY P+ N DL N K+ + I K + L
Sbjct: 310 QVPYGEEVFDFGKPFEKLTMREAIKKYRPETNMADLDNFDSAKAIAESIGIKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR+ N +N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARR-NDQNPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF++Q+D K + E + ++D DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFQDQVDAKAAGDDE-AMFFDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|270157122|ref|ZP_06185779.1| lysyl-tRNA synthetase [Legionella longbeachae D-4968]
gi|289164473|ref|YP_003454611.1| lysyl-tRNA synthetase [Legionella longbeachae NSW150]
gi|269989147|gb|EEZ95401.1| lysyl-tRNA synthetase [Legionella longbeachae D-4968]
gi|288857646|emb|CBJ11486.1| putative lysyl-tRNA synthetase [Legionella longbeachae NSW150]
Length = 497
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 232/440 (52%), Positives = 331/440 (75%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
+L+R+MGK SF +QD SG +IQ+YI + + Y FK++D+GDI+G +G LFK
Sbjct: 71 VLRRIMGKASFFHIQDFSG-----RIQIYIRANDLPEQ-YEQFKHWDLGDIVGVEGELFK 124
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TNTGEL++ ++L+TKSLRPLP+KF L++QE++YR RY+DLI N+ +R F R+++
Sbjct: 125 TNTGELTVNAEGIELLTKSLRPLPDKFHGLADQEMRYRKRYVDLIANDESRLTFLIRSRL 184
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I ++R FM+K+ F+EVETP++H PGGA+A+PF+THH++L+M M+LRIAPELYLKRL++G
Sbjct: 185 IQALRQFMDKSFFLEVETPMMHPIPGGALARPFVTHHHTLDMTMYLRIAPELYLKRLVVG 244
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF +++EIN+NFRNEGIS RHNPEFTM+EFY AY +Y LM FTE+MI+ + + +
Sbjct: 245 GFERVYEINRNFRNEGISTRHNPEFTMVEFYQAYADYKDLMNFTEEMIRYLCDSVLERRQ 304
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
++YQG++LDF K F ++T+ EAI Y P+ N L++ + ++ LK+ F + +
Sbjct: 305 VEYQGQILDFDKPFTRMTVKEAILHYHPEINVNQLESVVACRALLKEKKLPFKETDGIGK 364
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQ++LFEET E +L+ PT+IT YPTEISPLAR+S+ ++ +T+RFE FI G EIA
Sbjct: 365 -----LQIILFEETVEHQLFQPTFITGYPTEISPLARRSD-QDPELTDRFEFFIAGREIA 418
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RF+ Q+ K+ + E + ++D+DYI ALEYG+PP +G GIG+DRL+
Sbjct: 419 NGFSELNDAEDQAERFRKQVAEKDAGDME-AMHFDSDYIEALEYGLPPTAGEGIGIDRLV 477
Query: 421 MLLTNSKNIRDVILFPHLRN 440
ML TNS++IRDVILFPHLR
Sbjct: 478 MLFTNSQSIRDVILFPHLRQ 497
>gi|308187993|ref|YP_003932124.1| lysyl-tRNA synthetase [Pantoea vagans C9-1]
gi|308058503|gb|ADO10675.1| lysyl-tRNA synthetase [Pantoea vagans C9-1]
Length = 506
Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust.
Identities = 236/440 (53%), Positives = 318/440 (72%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G+IQLY+S + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFVTLQDV-----GGRIQLYVSRDDLAEGIYNEQFKKWDLGDILGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
+T TGELSI S L+L+TK+LRPLP+KF L++QE +YR RY+DLI NE +R FK R+Q
Sbjct: 130 RTKTGELSIHCSELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANEESRNTFKIRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM DFMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 IMAGIRQFMVGRDFMEVETPMMQVIPGGASARPFITHHNALDIDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF+++FEIN+NFRNEGISPRHNPEFTM+E Y AY +Y L++ TE + + + D +G+T
Sbjct: 250 GGFDRVFEINRNFRNEGISPRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGST 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y + DF K FEKLT+ EAIKKY P+ + DL++ + + ++ K + L
Sbjct: 310 VVPYGEQEFDFGKPFEKLTMREAIKKYRPETDLADLEDFDKAVAIAQSLHIKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEET E L PT+IT YP E+SPLAR+ N EN IT+RFE FI G EI
Sbjct: 370 RVVTEI-----FEETAEAHLIQPTFITEYPAEVSPLARR-NDENPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF Q++ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAERFLQQVNAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP LR
Sbjct: 483 VMLFTNSHTIRDVILFPALR 502
>gi|170766869|ref|ZP_02901322.1| lysyl-tRNA synthetase LysU [Escherichia albertii TW07627]
gi|170124307|gb|EDS93238.1| lysyl-tRNA synthetase LysU [Escherichia albertii TW07627]
Length = 505
Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust.
Identities = 234/440 (53%), Positives = 316/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y D FK +D+GDIIGA+GTLF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDSLPEGVYNDQFKKWDLGDIIGARGTLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE++YR RY+DLI N+ +R+ F R++
Sbjct: 130 KTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSK 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+++IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAAIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQDVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
K+ Y + DF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 KVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF+ Q++ K + E + +YD DY+ ALEYG+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAERFQEQVNAKAAGDDE-AMFYDEDYVTALEYGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
IML TNS IRDVILFP +R
Sbjct: 483 IMLFTNSHTIRDVILFPAMR 502
>gi|304396711|ref|ZP_07378591.1| lysyl-tRNA synthetase [Pantoea sp. aB]
gi|440759701|ref|ZP_20938829.1| Lysyl-tRNA synthetase (class II) [Pantoea agglomerans 299R]
gi|304355507|gb|EFM19874.1| lysyl-tRNA synthetase [Pantoea sp. aB]
gi|436426595|gb|ELP24304.1| Lysyl-tRNA synthetase (class II) [Pantoea agglomerans 299R]
Length = 506
Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust.
Identities = 236/440 (53%), Positives = 318/440 (72%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G+IQLY+S + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFVTLQDV-----GGRIQLYVSRDDLAEGIYNEQFKKWDLGDILGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
+T TGELSI S L+L+TK+LRPLP+KF L++QE +YR RY+DLI NE +R FK R+Q
Sbjct: 130 RTKTGELSIHCSELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANEESRNTFKIRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM DFMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 IMAGIRQFMVGRDFMEVETPMMQVIPGGASARPFITHHNALDIDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF+++FEIN+NFRNEGISPRHNPEFTM+E Y AY +Y L++ TE + + + D +G+T
Sbjct: 250 GGFDRVFEINRNFRNEGISPRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGST 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y + DF K FEKLT+ EAIKKY P+ + DL++ + + ++ K + L
Sbjct: 310 VVPYGEQEFDFGKPFEKLTMREAIKKYRPETDLADLEDFDKAVAIAQSLHIKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEET E L PT+IT YP E+SPLAR+ N EN IT+RFE FI G EI
Sbjct: 370 RVVTEI-----FEETAEAHLIQPTFITEYPAEVSPLARR-NDENPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF Q++ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAERFLQQVNAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP LR
Sbjct: 483 VMLFTNSHTIRDVILFPALR 502
>gi|372275143|ref|ZP_09511179.1| lysyl-tRNA synthetase [Pantoea sp. SL1_M5]
gi|390435274|ref|ZP_10223812.1| lysyl-tRNA ligase [Pantoea agglomerans IG1]
Length = 506
Score = 493 bits (1269), Expect = e-137, Method: Compositional matrix adjust.
Identities = 236/440 (53%), Positives = 318/440 (72%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY+S + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVSRDDLAEGIYNEQFKKWDLGDILGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI S L+L+TK+LRPLP+KF L++QE +YR RY+DLI NE +R F+ R+Q
Sbjct: 130 KTKTGELSIHCSELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANEESRNTFRIRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM DFMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 IMAGIRQFMVGRDFMEVETPMMQVIPGGASARPFITHHNALDIDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF+++FEIN+NFRNEGISPRHNPEFTM+E Y AY +Y L++ TE + + + D +G+T
Sbjct: 250 GGFDRVFEINRNFRNEGISPRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGST 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y + DF K FEKLT+ EAIKKY P+ + DL++ + + ++ K + L
Sbjct: 310 VVPYGEQEFDFGKPFEKLTMREAIKKYRPETDLADLEDFDKAVAIAQSLHIKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEET E L PT+IT YP E+SPLAR+ N EN IT+RFE FI G EI
Sbjct: 370 RVVTEI-----FEETAEAHLIQPTFITEYPAEVSPLARR-NDENPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF Q++ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAERFLQQVNAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP LR
Sbjct: 483 VMLFTNSHTIRDVILFPALR 502
>gi|387888032|ref|YP_006318330.1| lysyl-tRNA synthetase [Escherichia blattae DSM 4481]
gi|414595682|ref|ZP_11445297.1| lysyl-tRNA synthetase [Escherichia blattae NBRC 105725]
gi|386922865|gb|AFJ45819.1| lysyl-tRNA synthetase [Escherichia blattae DSM 4481]
gi|403193409|dbj|GAB82949.1| lysyl-tRNA synthetase [Escherichia blattae NBRC 105725]
Length = 505
Score = 493 bits (1269), Expect = e-137, Method: Compositional matrix adjust.
Identities = 233/439 (53%), Positives = 316/439 (71%), Gaps = 12/439 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M +R+MGK SF+ LQD G+IQLY+S + + + +Y +FK +D+GDI+GA+G LFK
Sbjct: 76 MTRRIMGKASFVTLQDV-----GGRIQLYVSRDDLPEGIYDEFKKWDLGDILGARGKLFK 130
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELSI + L+L+TK+LRPLP+KF L++QE +YR RY+DLI N+ +RK F+ R++I
Sbjct: 131 TKTGELSIHCTELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANDESRKTFQTRSRI 190
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
++ IR FM + FMEVETP++ PGGA A+PFITHHN+L+M M+LRIAPELYLKRL++G
Sbjct: 191 LAGIRQFMVERGFMEVETPMMQVIPGGASARPFITHHNALDMDMYLRIAPELYLKRLVVG 250
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + +G T
Sbjct: 251 GFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAETVLGHTD 310
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ Y + DF K FEKLT++EAIKKY P+ N DL++ K+ + + K + L
Sbjct: 311 VQYGEHVFDFGKPFEKLTMLEAIKKYRPETNMDDLKSFDTAKALAESLGIKVEKSWGLGR 370
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
+ +I F+E E L PT+IT YP EISPLAR++++ N IT+RFE FI G EI
Sbjct: 371 VTAEI-----FDEVAEEHLIQPTFITEYPAEISPLARRNDV-NPEITDRFEFFIGGREIG 424
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RF+ Q+D K + E + +YD DY+ ALE+G+PP +G GIG+DRL+
Sbjct: 425 NGFSELNDAEDQAERFREQVDAKANGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRLM 483
Query: 421 MLLTNSKNIRDVILFPHLR 439
ML TNS IRDVILFP LR
Sbjct: 484 MLFTNSHTIRDVILFPALR 502
>gi|251790992|ref|YP_003005713.1| lysyl-tRNA synthetase [Dickeya zeae Ech1591]
gi|247539613|gb|ACT08234.1| lysyl-tRNA synthetase [Dickeya zeae Ech1591]
Length = 505
Score = 493 bits (1269), Expect = e-137, Method: Compositional matrix adjust.
Identities = 232/440 (52%), Positives = 318/440 (72%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDILGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L++QE +YR RY+DLI N+ +R F+ R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANDESRHTFRVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM DFMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAGIRQFMVGRDFMEVETPMMQVIPGGASARPFITHHNALDIDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEG+SPRHNPEFTM+E Y AY +Y L++ TE + + + + +GTT
Sbjct: 250 GGFERVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQNVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y ++ DF K FEKLT+ EAIKKY P+ N DL + K+ + I K + L
Sbjct: 310 EVPYGDQVFDFGKPFEKLTMREAIKKYRPETNLADLDSFDAAKAIAESIGIKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR+ N +N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARR-NDQNPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF++Q+ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFQDQVAAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|271499214|ref|YP_003332239.1| lysyl-tRNA synthetase [Dickeya dadantii Ech586]
gi|270342769|gb|ACZ75534.1| lysyl-tRNA synthetase [Dickeya dadantii Ech586]
Length = 505
Score = 493 bits (1269), Expect = e-137, Method: Compositional matrix adjust.
Identities = 232/440 (52%), Positives = 318/440 (72%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDILGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L++QE +YR RY+DLI N+ +R F+ R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANDESRHTFRVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM DFMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAGIRQFMVGRDFMEVETPMMQVIPGGASARPFITHHNALDIDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEG+SPRHNPEFTM+E Y AY +Y L++ TE + + + + +GTT
Sbjct: 250 GGFERVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQNVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y ++ DF K FEKLT+ EAIKKY P+ N DL + K+ + I K + L
Sbjct: 310 EVPYGDQVFDFGKPFEKLTMREAIKKYRPETNLADLDSFDAAKAIAESIGIKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR+ N +N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARR-NDQNPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF++Q+ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFQDQVAAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|417238718|ref|ZP_12036142.1| lysine--tRNA ligase [Escherichia coli 9.0111]
gi|386213255|gb|EII23684.1| lysine--tRNA ligase [Escherichia coli 9.0111]
Length = 505
Score = 493 bits (1268), Expect = e-137, Method: Compositional matrix adjust.
Identities = 234/440 (53%), Positives = 316/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y D FK +D+GDIIGA+GTLF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDSLPEGVYNDQFKKWDLGDIIGARGTLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE++YR RY+DLI N+ +R+ F R++
Sbjct: 130 KTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSK 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+++IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAAIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + + +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
K+ Y + DF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 KVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF+ Q++ K N E + +YD DY+ ALEYG+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAERFQEQVNAKAAGNDE-AVFYDEDYVTALEYGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
IML TNS IRDVILFP +R
Sbjct: 483 IMLFTNSHTIRDVILFPAMR 502
>gi|432969759|ref|ZP_20158645.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE207]
gi|433085099|ref|ZP_20271535.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE133]
gi|431488678|gb|ELH68309.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE207]
gi|431596781|gb|ELI66726.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE133]
Length = 505
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/440 (52%), Positives = 316/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y D FK +D+GDIIGA+GTLF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDSLPEGVYNDQFKKWDLGDIIGARGTLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE++YR RY+DLI N+ +R+ F R++
Sbjct: 130 KTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSK 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+++IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAAIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + + +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
K+ Y + DF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 KVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NQEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF+ Q++ K + E + +YD DY+ ALEYG+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAERFQEQVNAKAAGDDE-AMFYDEDYVTALEYGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
IML TNS IRDVILFP +R
Sbjct: 483 IMLFTNSHTIRDVILFPAMR 502
>gi|152971836|ref|YP_001336945.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
gi|150956685|gb|ABR78715.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
Length = 505
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 234/440 (53%), Positives = 314/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y D FK +D+GDII A+G LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLAEGVYNDQFKKWDLGDIIAARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +RK FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRKTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAGIRQFMVGRGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +G T
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGNT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y ++ DF K FEKLT+ EAIKKY P+ DL N K+ + I K + L
Sbjct: 310 EVTYGDQVFDFGKPFEKLTMREAIKKYRPETEMADLDNFDSAKAIAESIGIKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF++Q+D K + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFQDQVDAKAAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|345300711|ref|YP_004830069.1| Lysyl-tRNA synthetase [Enterobacter asburiae LF7a]
gi|345094648|gb|AEN66284.1| Lysyl-tRNA synthetase [Enterobacter asburiae LF7a]
Length = 505
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 237/440 (53%), Positives = 315/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY+S + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVSRDDLPEGIYNEQFKKWDLGDILGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +RK FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRKTFKIRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM DFMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 IMAGIRQFMVNRDFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF+++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +GTT
Sbjct: 250 GGFDRVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y + DF K F KLT+ EAIKKY P+ DL N K+ + I K + L
Sbjct: 310 EVPYGDEVFDFGKPFVKLTMREAIKKYRPETEMADLDNFDSAKAIAESIGIKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR+ N EN IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARR-NDENPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF++Q+D K + E + ++D DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFQDQVDAKAAGDDE-AMFFDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|425074999|ref|ZP_18478102.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
WGLW1]
gi|425085635|ref|ZP_18488728.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
WGLW3]
gi|405595202|gb|EKB68592.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
WGLW1]
gi|405607667|gb|EKB80636.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
WGLW3]
Length = 505
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 234/440 (53%), Positives = 314/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y D FK +D+GDII A+G LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLAEGVYNDQFKKWDLGDIIAARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +RK FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRKTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAGIRQFMVGRGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +G T
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGNT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y ++ DF K FEKLT+ EAIKKY P+ DL N K+ + I K + L
Sbjct: 310 EVPYGDQVFDFGKPFEKLTMREAIKKYRPETEMADLDNFDSAKAIAESIGIKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF++Q+D K + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFQDQVDAKAAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|261342292|ref|ZP_05970150.1| lysine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
gi|288315633|gb|EFC54571.1| lysine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
Length = 505
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 237/440 (53%), Positives = 316/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY+S + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVSRDDLPEGIYNEQFKKWDLGDILGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +RK FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRKTFKIRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM DFMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 IMAGIRQFMVNRDFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF+++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +GTT
Sbjct: 250 GGFDRVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y + DF K FEKLT+ EAIKKY P+ DL N K+ + I K + L
Sbjct: 310 EVPYGEEVFDFGKPFEKLTMREAIKKYRPETEMADLDNFDSAKAIAESIGIKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR+ N EN IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARR-NDENPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF++Q++ K + E + ++D DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFQDQVNAKAAGDDE-AMFFDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|238896430|ref|YP_002921168.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|262042531|ref|ZP_06015688.1| lysine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
gi|330010997|ref|ZP_08306941.1| lysine--tRNA ligase [Klebsiella sp. MS 92-3]
gi|365140379|ref|ZP_09346434.1| lysyl-tRNA synthetase [Klebsiella sp. 4_1_44FAA]
gi|378980545|ref|YP_005228686.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|386036482|ref|YP_005956395.1| lysyl-tRNA synthetase [Klebsiella pneumoniae KCTC 2242]
gi|402779073|ref|YP_006634619.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
1084]
gi|419974979|ref|ZP_14490394.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|419978947|ref|ZP_14494241.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|419985887|ref|ZP_14501024.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|419990712|ref|ZP_14505682.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|419996447|ref|ZP_14511249.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|420002321|ref|ZP_14516973.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|420008339|ref|ZP_14522829.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|420014318|ref|ZP_14528625.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|420019616|ref|ZP_14533808.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|420025338|ref|ZP_14539347.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|420030911|ref|ZP_14544735.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|420036622|ref|ZP_14550281.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|420042714|ref|ZP_14556206.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|420048514|ref|ZP_14561827.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|420054278|ref|ZP_14567452.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|420059778|ref|ZP_14572783.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|420065551|ref|ZP_14578356.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|420072261|ref|ZP_14584900.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|420076957|ref|ZP_14589425.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|420082776|ref|ZP_14595068.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|421912592|ref|ZP_16342307.1| Lysyl-tRNA synthetase (class II) [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|421915016|ref|ZP_16344642.1| Lysyl-tRNA synthetase (class II) [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
gi|424832321|ref|ZP_18257049.1| lysyl-tRNA synthetase LysS [Klebsiella pneumoniae subsp. pneumoniae
Ecl8]
gi|424931888|ref|ZP_18350260.1| Lysyl-tRNA synthetase 2 (Lysine--tRNA ligase 2) [Klebsiella
pneumoniae subsp. pneumoniae KpQ3]
gi|425083126|ref|ZP_18486223.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
WGLW2]
gi|425093209|ref|ZP_18496293.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
WGLW5]
gi|428150390|ref|ZP_18998165.1| Lysyl-tRNA synthetase (class II) [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
gi|428934392|ref|ZP_19007913.1| lysyl-tRNA ligase [Klebsiella pneumoniae JHCK1]
gi|428942134|ref|ZP_19015147.1| lysyl-tRNA ligase [Klebsiella pneumoniae VA360]
gi|238548750|dbj|BAH65101.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|259040091|gb|EEW41205.1| lysine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
gi|328534334|gb|EGF60945.1| lysine--tRNA ligase [Klebsiella sp. MS 92-3]
gi|339763610|gb|AEJ99830.1| lysyl-tRNA synthetase [Klebsiella pneumoniae KCTC 2242]
gi|363653695|gb|EHL92644.1| lysyl-tRNA synthetase [Klebsiella sp. 4_1_44FAA]
gi|364519956|gb|AEW63084.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|397344464|gb|EJJ37598.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|397349767|gb|EJJ42859.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|397350525|gb|EJJ43613.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|397365136|gb|EJJ57762.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|397365956|gb|EJJ58576.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|397371157|gb|EJJ63700.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|397378419|gb|EJJ70631.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|397383392|gb|EJJ75533.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|397388829|gb|EJJ80788.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|397397342|gb|EJJ89018.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|397401144|gb|EJJ92776.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|397406448|gb|EJJ97868.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|397415053|gb|EJK06244.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|397415761|gb|EJK06941.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|397423096|gb|EJK14037.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|397431423|gb|EJK22099.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|397435119|gb|EJK25745.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|397439237|gb|EJK29690.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|397446533|gb|EJK36747.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|397451831|gb|EJK41909.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|402540016|gb|AFQ64165.1| Lysyl-tRNA synthetase (class II) [Klebsiella pneumoniae subsp.
pneumoniae 1084]
gi|405599445|gb|EKB72621.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
WGLW2]
gi|405611141|gb|EKB83922.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
WGLW5]
gi|407806075|gb|EKF77326.1| Lysyl-tRNA synthetase 2 (Lysine--tRNA ligase 2) [Klebsiella
pneumoniae subsp. pneumoniae KpQ3]
gi|410113571|emb|CCM84932.1| Lysyl-tRNA synthetase (class II) [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|410122744|emb|CCM87267.1| Lysyl-tRNA synthetase (class II) [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
gi|414709761|emb|CCN31465.1| lysyl-tRNA synthetase LysS [Klebsiella pneumoniae subsp. pneumoniae
Ecl8]
gi|426299253|gb|EKV61602.1| lysyl-tRNA ligase [Klebsiella pneumoniae VA360]
gi|426302929|gb|EKV65115.1| lysyl-tRNA ligase [Klebsiella pneumoniae JHCK1]
gi|427539665|emb|CCM94303.1| Lysyl-tRNA synthetase (class II) [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
Length = 505
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 234/440 (53%), Positives = 314/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y D FK +D+GDII A+G LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLAEGVYNDQFKKWDLGDIIAARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +RK FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRKTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAGIRQFMVGRGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +G T
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGNT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y ++ DF K FEKLT+ EAIKKY P+ DL N K+ + I K + L
Sbjct: 310 EVPYGDQVFDFGKPFEKLTMREAIKKYRPETEMADLDNFDSAKAIAESIGIKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF++Q+D K + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFQDQVDAKAAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|334125496|ref|ZP_08499485.1| lysine--tRNA ligase [Enterobacter hormaechei ATCC 49162]
gi|333386959|gb|EGK58163.1| lysine--tRNA ligase [Enterobacter hormaechei ATCC 49162]
Length = 505
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 237/440 (53%), Positives = 316/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY+S + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVSRDDLPEGIYNEQFKKWDLGDILGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +RK FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRKTFKIRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM DFMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 IMAGIRQFMVNRDFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF+++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +GTT
Sbjct: 250 GGFDRVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y + DF K FEKLT+ EAIKKY P+ DL N K+ + I K + L
Sbjct: 310 EVPYGEEVFDFGKPFEKLTMREAIKKYRPETEMADLDNFDSAKAIAESIGIKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR+ N EN IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARR-NDENPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF++Q++ K + E + ++D DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFQDQVNAKAAGDDE-AMFFDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|289208168|ref|YP_003460234.1| lysyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
gi|288943799|gb|ADC71498.1| lysyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
Length = 496
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 231/439 (52%), Positives = 323/439 (73%), Gaps = 12/439 (2%)
Query: 3 KRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
KRVMGK SF+ L+D SG IQL+ + + + +Y FK++D+GDI+G +GTLFKT
Sbjct: 69 KRVMGKASFVRLRDQSG-----DIQLFAQRDSLPEGVYAAFKHWDLGDIVGGQGTLFKTK 123
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
TGEL++++ L+L+TKSLRPLP KF L++QE +YR RY+DLI + ++R++F+ RT+I+
Sbjct: 124 TGELTVQLDELRLLTKSLRPLPEKFHGLTDQEQRYRQRYVDLITSPDSRELFRTRTRIVR 183
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
IR + E+ DF+EVETP++ PGGA A+PF THHN+L+M ++LRIAPELYLKRL++GGF
Sbjct: 184 YIREYFEREDFIEVETPMMQVIPGGATARPFATHHNALDMPLYLRIAPELYLKRLVVGGF 243
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
K+FEIN+NFRNEG+S RHNPEFTM+EFY A+ +Y LM TE +++ + D +GTT I+
Sbjct: 244 EKVFEINRNFRNEGLSTRHNPEFTMLEFYEAFVDYHALMDRTETLLRGLCEDVLGTTTIE 303
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNNLK 302
YQG DF + F ++T+ EAI + P+ + DL + +++ +++ Q L L
Sbjct: 304 YQGETYDFGQPFTRMTVREAILAHNPEISSEDLADIDKVRAHCERLEIPIKQSFGLGKLW 363
Query: 303 KDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIANG 362
+I FE T E KL +PT+IT YPTE+SPLAR+ N ++ +T+RFELF+ G EIANG
Sbjct: 364 TEI-----FEYTAENKLRHPTFITAYPTEVSPLARR-NDDDPFVTDRFELFVGGREIANG 417
Query: 363 FSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLIML 422
FSELNDPE+Q+ RF+ Q+ K+ + E + +YD DYI ALEYG+PP +G GIG+DRL+ML
Sbjct: 418 FSELNDPEDQAERFQAQVAEKDAGDDE-AMHYDADYIRALEYGLPPTAGEGIGIDRLVML 476
Query: 423 LTNSKNIRDVILFPHLRNE 441
LTNS +IRDV+LFPHLR E
Sbjct: 477 LTNSPSIRDVLLFPHLRPE 495
>gi|293394609|ref|ZP_06638903.1| lysine-tRNA ligase [Serratia odorifera DSM 4582]
gi|291422918|gb|EFE96153.1| lysine-tRNA ligase [Serratia odorifera DSM 4582]
Length = 505
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 232/440 (52%), Positives = 316/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLAEGVYNEQFKKWDLGDILGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L++QE +YR RY+DLI NE +R FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANEESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+S IR+FM FMEVETP++ PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 IMSGIRNFMVGRGFMEVETPMMQVIPGGASARPFVTHHNALDIDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEG+SPRHNPEFTM+E Y AY +Y L++ TE + + + D +G T
Sbjct: 250 GGFERVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGKT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y + DF K FEKLT+ EAIKKY P+ + DL + K+ + I K + L
Sbjct: 310 AVQYGDEVFDFGKPFEKLTMREAIKKYRPETDLADLDDFDKAKAIAESIGIKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEET E+ L PT+IT YP E+SPLAR+ N +N IT+RFE FI G EI
Sbjct: 370 RVVTEI-----FEETAESHLIQPTFITEYPAEVSPLARR-NDQNPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q+ K+ + E + +YD DY+ +LE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFADQVAAKDAGDDE-AMFYDEDYVTSLEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|432545989|ref|ZP_19782806.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE236]
gi|432551470|ref|ZP_19788213.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE237]
gi|432624522|ref|ZP_19860530.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE76]
gi|432817961|ref|ZP_20051688.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE115]
gi|431069586|gb|ELD77914.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE236]
gi|431075111|gb|ELD82646.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE237]
gi|431154574|gb|ELE55377.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE76]
gi|431358950|gb|ELG45595.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE115]
Length = 505
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 234/440 (53%), Positives = 316/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y D FK +D+GDIIGA+GTLF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDSLPEGVYNDQFKKWDLGDIIGARGTLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE++YR RY+DLI N+ +R+ F R++
Sbjct: 130 KTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSK 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+++IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAAIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF +IFEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + + +GTT
Sbjct: 250 GGFERIFEINRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
K+ Y + DF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 KVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF+ Q++ K + E + +YD DY+ ALEYG+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAERFQEQVNAKAAGDDE-AMFYDEDYVTALEYGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
IML TNS IRDVILFP +R
Sbjct: 483 IMLFTNSHTIRDVILFPAMR 502
>gi|381402735|ref|ZP_09927419.1| lysyl-tRNA synthetase [Pantoea sp. Sc1]
gi|380735934|gb|EIB96997.1| lysyl-tRNA synthetase [Pantoea sp. Sc1]
Length = 506
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 235/440 (53%), Positives = 318/440 (72%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G+IQLY+S + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFVTLQDV-----GGRIQLYVSRDDLAEGIYNEQFKKWDLGDILGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI S L+L+TK+LRPLP+KF L++QE +YR RY+DLI N+ +R F+ R+Q
Sbjct: 130 KTKTGELSIHCSELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANDESRNTFRIRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM DFMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 IMAGIRQFMVSRDFMEVETPMMQVIPGGASARPFITHHNALDIDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF+++FEIN+NFRNEGISPRHNPEFTM+E Y AY +Y L++ TE + + + D +G+T
Sbjct: 250 GGFDRVFEINRNFRNEGISPRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGST 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y + DF K FEKLT+ EAIKKY P+ + DL++ + + ++ K + L
Sbjct: 310 VVPYGEQEFDFGKPFEKLTMREAIKKYRPETDLADLEDFDKAVAIAQSLHIKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEET E L PT+IT YP E+SPLAR+ N EN IT+RFE FI G EI
Sbjct: 370 RVVTEI-----FEETAEANLIQPTFITEYPAEVSPLARR-NDENPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF Q++ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAERFLQQVNAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP LR
Sbjct: 483 VMLFTNSHTIRDVILFPALR 502
>gi|331665797|ref|ZP_08366691.1| lysine--tRNA ligase [Escherichia coli TA143]
gi|331056848|gb|EGI28842.1| lysine--tRNA ligase [Escherichia coli TA143]
Length = 505
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/440 (52%), Positives = 316/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y D FK +D+GDIIGA+GTLF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDSLPEGVYNDQFKKWDLGDIIGARGTLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE++YR RY+DLI N+ +R+ F R++
Sbjct: 130 KTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSK 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+++IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAAIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + + +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
K+ Y + DF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 KVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF+ Q++ K + E + +YD DY+ ALEYG+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAERFQEQVNAKAAGDDE-AMFYDEDYVTALEYGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
IML TNS IRDVILFP +R
Sbjct: 483 IMLFTNSHTIRDVILFPAMR 502
>gi|336450613|ref|ZP_08621060.1| lysyl-tRNA synthetase (class II) [Idiomarina sp. A28L]
gi|336282436|gb|EGN75668.1| lysyl-tRNA synthetase (class II) [Idiomarina sp. A28L]
Length = 508
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 227/442 (51%), Positives = 322/442 (72%), Gaps = 13/442 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
+L+R+MGK SF LQD SG +IQ+Y++ + + + Y D FK +D+GDI+GA G LF
Sbjct: 72 VLRRIMGKASFATLQDMSG-----QIQIYVARDNLPEGTYNDGFKKWDLGDIVGASGVLF 126
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGEL+++V +KL+TK+LRPLP+KF L++QE +YR RY+DLI+N+ +R+ F R++
Sbjct: 127 KTRTGELTVQVDEIKLLTKALRPLPDKFHGLADQETRYRQRYLDLIVNQQSRETFIMRSK 186
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I IR F+ F+EVETP++ PGGA A+PF+THHN+L+M ++LRIAPELYLKRL++
Sbjct: 187 AIEYIRQFLNTRAFLEVETPMMQTIPGGASARPFVTHHNALDMDLYLRIAPELYLKRLVV 246
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY Y +Y LM TE+M++ + + +GTT
Sbjct: 247 GGFEKVFEINRNFRNEGLSTRHNPEFTMLEFYWGYADYHDLMDLTEEMVRGLCNELLGTT 306
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ YQG DF K F +L++++AI KY + E D+ + + +KI K + L
Sbjct: 307 EVTYQGEQFDFGKPFVRLSVVDAILKYNAELTEADVNDLAKASAYAEKIGVKVQKSWGLG 366
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+Q+ +FEET E +L PT+IT YP E+SPLAR+ N +N +T+RFE F+ G EI
Sbjct: 367 K-----IQIEIFEETAEHELAQPTFITAYPAEVSPLARR-NDDNPFVTDRFEFFVGGREI 420
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
ANGFSELND E+Q+ RF+ Q++ K + E + +YD DY+ ALEYG+PP +G GIG+DRL
Sbjct: 421 ANGFSELNDAEDQAERFQAQVEQKEAGDSE-AMFYDADYVAALEYGLPPTAGEGIGIDRL 479
Query: 420 IMLLTNSKNIRDVILFPHLRNE 441
+MLLT+S +IRDV+LFPH+RN+
Sbjct: 480 VMLLTDSPSIRDVLLFPHMRNQ 501
>gi|386621855|ref|YP_006141435.1| Lysyl-tRNA synthetase class II [Escherichia coli NA114]
gi|333972356|gb|AEG39161.1| Lysyl-tRNA synthetase class II [Escherichia coli NA114]
Length = 505
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/440 (52%), Positives = 316/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y D FK +D+GDIIGA+GTLF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDSLPEGVYNDQFKKWDLGDIIGARGTLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE++YR RY+DLI N+ +R+ F R++
Sbjct: 130 KTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSK 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+++IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAAIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + + +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
K+ Y + DF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 KVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF+ Q++ K + E + +YD DY+ ALEYG+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAERFQEQVNAKAAGDDE-AMFYDEDYVTALEYGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
IML TNS IRDVILFP +R
Sbjct: 483 IMLFTNSHTIRDVILFPAMR 502
>gi|117626414|ref|YP_859737.1| lysyl-tRNA synthetase [Escherichia coli APEC O1]
gi|161486020|ref|NP_756986.2| lysyl-tRNA synthetase [Escherichia coli CFT073]
gi|162138308|ref|YP_543665.2| lysyl-tRNA synthetase [Escherichia coli UTI89]
gi|218561217|ref|YP_002394130.1| lysyl-tRNA synthetase [Escherichia coli S88]
gi|218707745|ref|YP_002415264.1| lysyl-tRNA synthetase [Escherichia coli UMN026]
gi|227886830|ref|ZP_04004635.1| lysine--tRNA ligase [Escherichia coli 83972]
gi|293402762|ref|ZP_06646859.1| lysS [Escherichia coli FVEC1412]
gi|293407855|ref|ZP_06651695.1| lysyl-tRNA synthetase [Escherichia coli B354]
gi|298378291|ref|ZP_06988175.1| lysS [Escherichia coli FVEC1302]
gi|300897550|ref|ZP_07115962.1| lysyl-tRNA synthetase [Escherichia coli MS 198-1]
gi|300940610|ref|ZP_07155175.1| lysyl-tRNA synthetase [Escherichia coli MS 21-1]
gi|300988376|ref|ZP_07178640.1| lysyl-tRNA synthetase [Escherichia coli MS 45-1]
gi|301021726|ref|ZP_07185698.1| lysyl-tRNA synthetase [Escherichia coli MS 69-1]
gi|301047649|ref|ZP_07194712.1| lysyl-tRNA synthetase [Escherichia coli MS 185-1]
gi|331650168|ref|ZP_08351241.1| lysine--tRNA ligase [Escherichia coli M605]
gi|331660708|ref|ZP_08361640.1| lysine--tRNA ligase [Escherichia coli TA206]
gi|386602194|ref|YP_006103700.1| lysyl-tRNA synthetase LysU [Escherichia coli IHE3034]
gi|386606717|ref|YP_006113017.1| lysyl-tRNA synthetase [Escherichia coli UM146]
gi|386632138|ref|YP_006151858.1| lysyl-tRNA synthetase [Escherichia coli str. 'clone D i2']
gi|386637058|ref|YP_006156777.1| lysyl-tRNA synthetase [Escherichia coli str. 'clone D i14']
gi|386641808|ref|YP_006108606.1| lysyl-tRNA synthetase [Escherichia coli ABU 83972]
gi|387609917|ref|YP_006098773.1| lysyl-tRNA synthetase [Escherichia coli 042]
gi|387832071|ref|YP_003352008.1| lysyl-tRNA synthetase [Escherichia coli SE15]
gi|415838067|ref|ZP_11520050.1| lysyl-tRNA synthetase [Escherichia coli RN587/1]
gi|416338899|ref|ZP_11674900.1| lysyl-tRNA synthetase [Escherichia coli WV_060327]
gi|416900861|ref|ZP_11929993.1| lysyl-tRNA synthetase [Escherichia coli STEC_7v]
gi|417088275|ref|ZP_11955004.1| lysyl-tRNA synthetase [Escherichia coli cloneA_i1]
gi|417116707|ref|ZP_11967568.1| lysine--tRNA ligase [Escherichia coli 1.2741]
gi|417141651|ref|ZP_11984503.1| lysine--tRNA ligase [Escherichia coli 97.0259]
gi|417280141|ref|ZP_12067441.1| lysine--tRNA ligase [Escherichia coli 3003]
gi|417310755|ref|ZP_12097561.1| Lysyl-tRNA synthetase [Escherichia coli PCN033]
gi|417584540|ref|ZP_12235324.1| lysyl-tRNA synthetase [Escherichia coli STEC_C165-02]
gi|417664801|ref|ZP_12314380.1| lysyl-tRNA synthetase (class 2) [Escherichia coli AA86]
gi|419703014|ref|ZP_14230595.1| lysyl-tRNA synthetase [Escherichia coli SCI-07]
gi|419919406|ref|ZP_14437561.1| lysyl-tRNA synthetase [Escherichia coli KD2]
gi|419935727|ref|ZP_14452796.1| lysyl-tRNA synthetase [Escherichia coli 576-1]
gi|419943030|ref|ZP_14459601.1| lysyl-tRNA synthetase [Escherichia coli HM605]
gi|422331430|ref|ZP_16412446.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli 4_1_47FAA]
gi|422358222|ref|ZP_16438882.1| lysyl-tRNA synthetase [Escherichia coli MS 110-3]
gi|422363227|ref|ZP_16443768.1| lysyl-tRNA synthetase [Escherichia coli MS 153-1]
gi|422372158|ref|ZP_16452525.1| lysyl-tRNA synthetase [Escherichia coli MS 16-3]
gi|422380140|ref|ZP_16460320.1| lysyl-tRNA synthetase [Escherichia coli MS 57-2]
gi|422750970|ref|ZP_16804880.1| lysyl-tRNA synthetase [Escherichia coli H252]
gi|422757082|ref|ZP_16810903.1| lysyl-tRNA synthetase [Escherichia coli H263]
gi|422783514|ref|ZP_16836298.1| lysyl-tRNA synthetase [Escherichia coli TW10509]
gi|422801847|ref|ZP_16850342.1| lysyl-tRNA synthetase [Escherichia coli M863]
gi|422840405|ref|ZP_16888376.1| lysyl-tRNA synthetase [Escherichia coli H397]
gi|422972485|ref|ZP_16975312.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli TA124]
gi|425280610|ref|ZP_18671818.1| lysine--tRNA ligase [Escherichia coli ARS4.2123]
gi|432351318|ref|ZP_19594635.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE2]
gi|432360629|ref|ZP_19603836.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE4]
gi|432365430|ref|ZP_19608579.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE5]
gi|432394874|ref|ZP_19637684.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE21]
gi|432395568|ref|ZP_19638363.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE25]
gi|432404524|ref|ZP_19647262.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE26]
gi|432409254|ref|ZP_19651951.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE28]
gi|432409670|ref|ZP_19652359.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE39]
gi|432419784|ref|ZP_19662346.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE178]
gi|432428793|ref|ZP_19671266.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE181]
gi|432429916|ref|ZP_19672367.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE187]
gi|432439137|ref|ZP_19681508.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE188]
gi|432454407|ref|ZP_19696623.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE201]
gi|432463534|ref|ZP_19705661.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE204]
gi|432468556|ref|ZP_19710626.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE205]
gi|432478490|ref|ZP_19720470.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE208]
gi|432491966|ref|ZP_19733819.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE213]
gi|432493490|ref|ZP_19735313.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE214]
gi|432502741|ref|ZP_19744485.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE216]
gi|432509918|ref|ZP_19748782.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE220]
gi|432520340|ref|ZP_19757514.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE228]
gi|432526652|ref|ZP_19763759.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE230]
gi|432540508|ref|ZP_19777395.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE235]
gi|432556695|ref|ZP_19793396.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE49]
gi|432566591|ref|ZP_19803125.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE53]
gi|432571474|ref|ZP_19807970.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE55]
gi|432580947|ref|ZP_19817367.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE57]
gi|432585940|ref|ZP_19822318.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE58]
gi|432590755|ref|ZP_19827090.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE60]
gi|432595457|ref|ZP_19831755.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE62]
gi|432604952|ref|ZP_19841175.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE66]
gi|432605616|ref|ZP_19841819.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE67]
gi|432634132|ref|ZP_19870044.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE80]
gi|432643724|ref|ZP_19879540.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE83]
gi|432653832|ref|ZP_19889565.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE87]
gi|432663847|ref|ZP_19899453.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE116]
gi|432682935|ref|ZP_19918282.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE143]
gi|432697049|ref|ZP_19932235.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE162]
gi|432708569|ref|ZP_19943640.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE6]
gi|432716764|ref|ZP_19951773.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE9]
gi|432721326|ref|ZP_19956258.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE17]
gi|432725724|ref|ZP_19960629.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE18]
gi|432730472|ref|ZP_19965335.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE45]
gi|432739505|ref|ZP_19974229.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE23]
gi|432757131|ref|ZP_19991671.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE22]
gi|432762021|ref|ZP_19996489.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE46]
gi|432768508|ref|ZP_20002893.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE50]
gi|432772901|ref|ZP_20007207.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE54]
gi|432776499|ref|ZP_20010760.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE59]
gi|432781512|ref|ZP_20015706.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE63]
gi|432790198|ref|ZP_20024322.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE65]
gi|432790913|ref|ZP_20025030.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE78]
gi|432796902|ref|ZP_20030932.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE79]
gi|432818965|ref|ZP_20052683.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE118]
gi|432825094|ref|ZP_20058755.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE123]
gi|432837231|ref|ZP_20070729.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE140]
gi|432842014|ref|ZP_20075446.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE141]
gi|432856371|ref|ZP_20083811.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE144]
gi|432872167|ref|ZP_20092046.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE147]
gi|432883064|ref|ZP_20098594.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE158]
gi|432892006|ref|ZP_20104485.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE165]
gi|432896234|ref|ZP_20107444.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE192]
gi|432909041|ref|ZP_20116547.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE190]
gi|432916359|ref|ZP_20121331.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE173]
gi|432923733|ref|ZP_20126240.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE175]
gi|432958148|ref|ZP_20149290.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE202]
gi|432976400|ref|ZP_20165228.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE209]
gi|432979053|ref|ZP_20167847.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE211]
gi|432988672|ref|ZP_20177347.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE217]
gi|432993382|ref|ZP_20182007.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE218]
gi|432997840|ref|ZP_20186415.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE223]
gi|433003118|ref|ZP_20191621.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE227]
gi|433010376|ref|ZP_20198783.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE229]
gi|433021386|ref|ZP_20209454.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE105]
gi|433031104|ref|ZP_20218939.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE109]
gi|433055759|ref|ZP_20242902.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE122]
gi|433060707|ref|ZP_20247729.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE124]
gi|433065604|ref|ZP_20252498.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE125]
gi|433070537|ref|ZP_20257290.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE128]
gi|433075504|ref|ZP_20262130.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE129]
gi|433089910|ref|ZP_20276259.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE137]
gi|433099019|ref|ZP_20285175.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE139]
gi|433108454|ref|ZP_20294401.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE148]
gi|433113454|ref|ZP_20299291.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE150]
gi|433118114|ref|ZP_20303884.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE153]
gi|433122834|ref|ZP_20308481.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE157]
gi|433127816|ref|ZP_20313347.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE160]
gi|433141889|ref|ZP_20327117.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE167]
gi|433151841|ref|ZP_20336828.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE174]
gi|433156411|ref|ZP_20341328.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE176]
gi|433161287|ref|ZP_20346093.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE177]
gi|433166196|ref|ZP_20350914.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE179]
gi|433171193|ref|ZP_20355801.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE180]
gi|433181002|ref|ZP_20365366.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE82]
gi|433185962|ref|ZP_20370187.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE85]
gi|433205894|ref|ZP_20389626.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE95]
gi|433210376|ref|ZP_20394029.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE97]
gi|433215215|ref|ZP_20398778.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE99]
gi|442606130|ref|ZP_21020931.1| Lysyl-tRNA synthetase (class II) [Escherichia coli Nissle 1917]
gi|39932415|sp|Q8FAT5.3|SYK2_ECOL6 RecName: Full=Lysine--tRNA ligase, heat inducible; AltName:
Full=Lysyl-tRNA synthetase; Short=LysRS
gi|115515538|gb|ABJ03613.1| lysyl-tRNA synthetase [Escherichia coli APEC O1]
gi|218367986|emb|CAR05786.1| lysine tRNA synthetase, inducible [Escherichia coli S88]
gi|218434842|emb|CAR15778.1| lysine tRNA synthetase, inducible [Escherichia coli UMN026]
gi|227836172|gb|EEJ46638.1| lysine--tRNA ligase [Escherichia coli 83972]
gi|281181228|dbj|BAI57558.1| lysyl-tRNA synthetase [Escherichia coli SE15]
gi|284924217|emb|CBG37317.1| lysyl-tRNA synthetase [Escherichia coli 042]
gi|291429677|gb|EFF02691.1| lysS [Escherichia coli FVEC1412]
gi|291472106|gb|EFF14588.1| lysyl-tRNA synthetase [Escherichia coli B354]
gi|294491540|gb|ADE90296.1| lysyl-tRNA synthetase LysU [Escherichia coli IHE3034]
gi|298280625|gb|EFI22126.1| lysS [Escherichia coli FVEC1302]
gi|300300455|gb|EFJ56840.1| lysyl-tRNA synthetase [Escherichia coli MS 185-1]
gi|300358698|gb|EFJ74568.1| lysyl-tRNA synthetase [Escherichia coli MS 198-1]
gi|300397909|gb|EFJ81447.1| lysyl-tRNA synthetase [Escherichia coli MS 69-1]
gi|300407476|gb|EFJ91014.1| lysyl-tRNA synthetase [Escherichia coli MS 45-1]
gi|300454610|gb|EFK18103.1| lysyl-tRNA synthetase [Escherichia coli MS 21-1]
gi|307556300|gb|ADN49075.1| lysyl-tRNA synthetase [Escherichia coli ABU 83972]
gi|307629201|gb|ADN73505.1| lysyl-tRNA synthetase [Escherichia coli UM146]
gi|315287968|gb|EFU47370.1| lysyl-tRNA synthetase [Escherichia coli MS 110-3]
gi|315294016|gb|EFU53368.1| lysyl-tRNA synthetase [Escherichia coli MS 153-1]
gi|315296081|gb|EFU55390.1| lysyl-tRNA synthetase [Escherichia coli MS 16-3]
gi|320193511|gb|EFW68148.1| lysyl-tRNA synthetase [Escherichia coli WV_060327]
gi|323189988|gb|EFZ75266.1| lysyl-tRNA synthetase [Escherichia coli RN587/1]
gi|323950305|gb|EGB46186.1| lysyl-tRNA synthetase [Escherichia coli H252]
gi|323954384|gb|EGB50168.1| lysyl-tRNA synthetase [Escherichia coli H263]
gi|323965518|gb|EGB60972.1| lysyl-tRNA synthetase [Escherichia coli M863]
gi|323975529|gb|EGB70630.1| lysyl-tRNA synthetase [Escherichia coli TW10509]
gi|324008622|gb|EGB77841.1| lysyl-tRNA synthetase [Escherichia coli MS 57-2]
gi|327250072|gb|EGE61791.1| lysyl-tRNA synthetase [Escherichia coli STEC_7v]
gi|330908475|gb|EGH36994.1| lysyl-tRNA synthetase (class 2) [Escherichia coli AA86]
gi|331041113|gb|EGI13270.1| lysine--tRNA ligase [Escherichia coli M605]
gi|331051750|gb|EGI23789.1| lysine--tRNA ligase [Escherichia coli TA206]
gi|338767660|gb|EGP22474.1| Lysyl-tRNA synthetase [Escherichia coli PCN033]
gi|345342723|gb|EGW75115.1| lysyl-tRNA synthetase [Escherichia coli STEC_C165-02]
gi|355349319|gb|EHF98528.1| lysyl-tRNA synthetase [Escherichia coli cloneA_i1]
gi|355423037|gb|AER87234.1| lysyl-tRNA synthetase [Escherichia coli str. 'clone D i2']
gi|355427957|gb|AER92153.1| lysyl-tRNA synthetase [Escherichia coli str. 'clone D i14']
gi|371597722|gb|EHN86541.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli TA124]
gi|371606094|gb|EHN94692.1| lysyl-tRNA synthetase [Escherichia coli H397]
gi|373247755|gb|EHP67195.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli 4_1_47FAA]
gi|380345877|gb|EIA34184.1| lysyl-tRNA synthetase [Escherichia coli SCI-07]
gi|386139251|gb|EIG80406.1| lysine--tRNA ligase [Escherichia coli 1.2741]
gi|386155554|gb|EIH11905.1| lysine--tRNA ligase [Escherichia coli 97.0259]
gi|386244470|gb|EII86200.1| lysine--tRNA ligase [Escherichia coli 3003]
gi|388387854|gb|EIL49455.1| lysyl-tRNA synthetase [Escherichia coli KD2]
gi|388403938|gb|EIL64436.1| lysyl-tRNA synthetase [Escherichia coli 576-1]
gi|388421873|gb|EIL81472.1| lysyl-tRNA synthetase [Escherichia coli HM605]
gi|408196575|gb|EKI21854.1| lysine--tRNA ligase [Escherichia coli ARS4.2123]
gi|430872337|gb|ELB95951.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE4]
gi|430882053|gb|ELC05258.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE2]
gi|430882695|gb|ELC05774.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE5]
gi|430912624|gb|ELC33797.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE21]
gi|430919551|gb|ELC40482.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE25]
gi|430921919|gb|ELC42742.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE26]
gi|430925403|gb|ELC46074.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE28]
gi|430939704|gb|ELC59915.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE39]
gi|430948561|gb|ELC68148.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE178]
gi|430949498|gb|ELC68930.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE181]
gi|430957792|gb|ELC76395.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE187]
gi|430959144|gb|ELC77484.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE188]
gi|430984692|gb|ELD01314.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE204]
gi|430987300|gb|ELD03841.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE201]
gi|430989287|gb|ELD05746.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE205]
gi|431000425|gb|ELD16485.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE208]
gi|431015700|gb|ELD29250.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE213]
gi|431025005|gb|ELD38123.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE216]
gi|431030044|gb|ELD43071.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE214]
gi|431033950|gb|ELD45899.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE220]
gi|431046555|gb|ELD56653.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE230]
gi|431046590|gb|ELD56687.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE228]
gi|431066065|gb|ELD74813.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE235]
gi|431095737|gb|ELE01342.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE49]
gi|431103828|gb|ELE08436.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE53]
gi|431112953|gb|ELE16634.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE55]
gi|431123519|gb|ELE26255.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE57]
gi|431125241|gb|ELE27671.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE58]
gi|431134313|gb|ELE36264.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE60]
gi|431135395|gb|ELE37310.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE62]
gi|431135604|gb|ELE37480.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE66]
gi|431143315|gb|ELE45050.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE67]
gi|431166171|gb|ELE66497.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE80]
gi|431176206|gb|ELE76171.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE83]
gi|431186178|gb|ELE85745.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE87]
gi|431205933|gb|ELF04369.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE116]
gi|431216139|gb|ELF13780.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE143]
gi|431229448|gb|ELF26097.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE162]
gi|431253208|gb|ELF46687.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE6]
gi|431269144|gb|ELF60503.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE9]
gi|431269565|gb|ELF60875.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE17]
gi|431278093|gb|ELF69095.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE18]
gi|431279436|gb|ELF70395.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE45]
gi|431287536|gb|ELF78346.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE23]
gi|431298599|gb|ELF88224.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE22]
gi|431304041|gb|ELF92578.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE46]
gi|431321024|gb|ELG08647.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE50]
gi|431322826|gb|ELG10409.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE54]
gi|431333246|gb|ELG20461.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE59]
gi|431333361|gb|ELG20574.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE63]
gi|431334431|gb|ELG21593.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE65]
gi|431343453|gb|ELG30411.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE78]
gi|431346887|gb|ELG33781.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE79]
gi|431372165|gb|ELG57861.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE118]
gi|431377090|gb|ELG62229.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE123]
gi|431393044|gb|ELG76609.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE140]
gi|431396197|gb|ELG79683.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE144]
gi|431399239|gb|ELG82647.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE141]
gi|431406481|gb|ELG89701.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE147]
gi|431421962|gb|ELH04158.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE158]
gi|431427801|gb|ELH09744.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE165]
gi|431432229|gb|ELH14000.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE192]
gi|431449926|gb|ELH30491.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE190]
gi|431450571|gb|ELH31057.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE173]
gi|431450965|gb|ELH31442.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE175]
gi|431484023|gb|ELH63704.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE209]
gi|431484951|gb|ELH64622.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE202]
gi|431500376|gb|ELH79391.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE211]
gi|431501321|gb|ELH80305.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE217]
gi|431512850|gb|ELH90939.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE218]
gi|431518755|gb|ELH96208.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE223]
gi|431520160|gb|ELH97587.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE229]
gi|431520547|gb|ELH97872.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE227]
gi|431525909|gb|ELI02683.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE105]
gi|431538770|gb|ELI14753.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE109]
gi|431564174|gb|ELI37352.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE122]
gi|431564655|gb|ELI37825.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE124]
gi|431577220|gb|ELI49872.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE125]
gi|431577726|gb|ELI50356.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE128]
gi|431581083|gb|ELI53538.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE129]
gi|431599244|gb|ELI68953.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE137]
gi|431610973|gb|ELI80255.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE139]
gi|431622050|gb|ELI90835.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE148]
gi|431623038|gb|ELI91718.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE150]
gi|431629069|gb|ELI97436.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE153]
gi|431637767|gb|ELJ05821.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE157]
gi|431638967|gb|ELJ06843.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE160]
gi|431654174|gb|ELJ21244.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE167]
gi|431666245|gb|ELJ32892.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE174]
gi|431669028|gb|ELJ35467.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE176]
gi|431672272|gb|ELJ38544.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE177]
gi|431682398|gb|ELJ48165.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE179]
gi|431682832|gb|ELJ48481.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE180]
gi|431697047|gb|ELJ62196.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE82]
gi|431700494|gb|ELJ65473.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE85]
gi|431714487|gb|ELJ78673.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE95]
gi|431727428|gb|ELJ91186.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE97]
gi|431730349|gb|ELJ93914.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE99]
gi|441712735|emb|CCQ06908.1| Lysyl-tRNA synthetase (class II) [Escherichia coli Nissle 1917]
Length = 505
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/440 (52%), Positives = 316/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y D FK +D+GDIIGA+GTLF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDSLPEGVYNDQFKKWDLGDIIGARGTLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE++YR RY+DLI N+ +R+ F R++
Sbjct: 130 KTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSK 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+++IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAAIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + + +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
K+ Y + DF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 KVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF+ Q++ K + E + +YD DY+ ALEYG+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAERFQEQVNAKAAGDDE-AMFYDEDYVTALEYGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
IML TNS IRDVILFP +R
Sbjct: 483 IMLFTNSHTIRDVILFPAMR 502
>gi|420272621|ref|ZP_14774963.1| lysine--tRNA ligase [Escherichia coli PA22]
gi|390710750|gb|EIN83752.1| lysine--tRNA ligase [Escherichia coli PA22]
Length = 505
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/440 (52%), Positives = 316/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y D FK +D+GDIIGA+GTLF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDSLPEGVYNDRFKKWDLGDIIGARGTLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE++YR RY+DLI N+ +R+ F R++
Sbjct: 130 KTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSK 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+++IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAAIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + + +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
K+ Y + DF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 KVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF+ Q++ K + E + +YD DY+ ALEYG+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAERFQEQVNAKAAGDDE-AMFYDEDYVTALEYGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
IML TNS IRDVILFP +R
Sbjct: 483 IMLFTNSHTIRDVILFPAMR 502
>gi|15804722|ref|NP_290763.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. EDL933]
gi|15834365|ref|NP_313138.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
gi|16131955|ref|NP_418553.1| lysine tRNA synthetase, inducible [Escherichia coli str. K-12
substr. MG1655]
gi|157163595|ref|YP_001460913.1| lysyl-tRNA synthetase [Escherichia coli HS]
gi|168748011|ref|ZP_02773033.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4113]
gi|168755314|ref|ZP_02780321.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4401]
gi|168760993|ref|ZP_02786000.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4501]
gi|168766403|ref|ZP_02791410.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4486]
gi|168774502|ref|ZP_02799509.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4196]
gi|168780556|ref|ZP_02805563.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4076]
gi|168784761|ref|ZP_02809768.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC869]
gi|168798195|ref|ZP_02823202.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC508]
gi|170083579|ref|YP_001732899.1| lysyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B]
gi|188493779|ref|ZP_03001049.1| lysyl-tRNA synthetase LysU [Escherichia coli 53638]
gi|193063048|ref|ZP_03044140.1| lysyl-tRNA synthetase LysU [Escherichia coli E22]
gi|194426817|ref|ZP_03059370.1| lysyl-tRNA synthetase LysU [Escherichia coli B171]
gi|195935919|ref|ZP_03081301.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4024]
gi|208807103|ref|ZP_03249440.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4206]
gi|208813962|ref|ZP_03255291.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4045]
gi|208819932|ref|ZP_03260252.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4042]
gi|209400647|ref|YP_002273676.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
gi|209921620|ref|YP_002295704.1| lysyl-tRNA synthetase [Escherichia coli SE11]
gi|217326188|ref|ZP_03442272.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. TW14588]
gi|218556682|ref|YP_002389596.1| lysyl-tRNA synthetase [Escherichia coli IAI1]
gi|218697832|ref|YP_002405499.1| lysyl-tRNA synthetase [Escherichia coli 55989]
gi|238903238|ref|YP_002929034.1| lysyl-tRNA synthetase [Escherichia coli BW2952]
gi|254796152|ref|YP_003080989.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
gi|260846924|ref|YP_003224702.1| lysine tRNA synthetase LysU, inducible [Escherichia coli O103:H2
str. 12009]
gi|260858233|ref|YP_003232124.1| lysyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
gi|261225251|ref|ZP_05939532.1| lysine tRNA synthetase, inducible [Escherichia coli O157:H7 str.
FRIK2000]
gi|261255497|ref|ZP_05948030.1| lysine tRNA synthetase LysU, inducible [Escherichia coli O157:H7
str. FRIK966]
gi|291285546|ref|YP_003502364.1| Lysyl-tRNA synthetase, heat inducible [Escherichia coli O55:H7 str.
CB9615]
gi|293417636|ref|ZP_06660258.1| lysyl-tRNA synthetase [Escherichia coli B185]
gi|293476442|ref|ZP_06664850.1| lysyl-tRNA synthetase [Escherichia coli B088]
gi|300818053|ref|ZP_07098266.1| lysyl-tRNA synthetase [Escherichia coli MS 107-1]
gi|300821220|ref|ZP_07101368.1| lysyl-tRNA synthetase [Escherichia coli MS 119-7]
gi|300906460|ref|ZP_07124156.1| lysyl-tRNA synthetase [Escherichia coli MS 84-1]
gi|300920874|ref|ZP_07137270.1| lysyl-tRNA synthetase [Escherichia coli MS 115-1]
gi|300947711|ref|ZP_07161878.1| lysyl-tRNA synthetase [Escherichia coli MS 116-1]
gi|300954178|ref|ZP_07166643.1| lysyl-tRNA synthetase [Escherichia coli MS 175-1]
gi|301027934|ref|ZP_07191223.1| lysyl-tRNA synthetase [Escherichia coli MS 196-1]
gi|301306056|ref|ZP_07212135.1| lysyl-tRNA synthetase [Escherichia coli MS 124-1]
gi|301644736|ref|ZP_07244713.1| lysyl-tRNA synthetase [Escherichia coli MS 146-1]
gi|307312033|ref|ZP_07591670.1| lysyl-tRNA synthetase [Escherichia coli W]
gi|331644878|ref|ZP_08345995.1| lysine--tRNA ligase [Escherichia coli H736]
gi|331670994|ref|ZP_08371828.1| lysine--tRNA ligase [Escherichia coli TA271]
gi|331680261|ref|ZP_08380920.1| lysine--tRNA ligase [Escherichia coli H591]
gi|366157901|ref|ZP_09457763.1| lysyl-tRNA synthetase [Escherichia sp. TW09308]
gi|378714922|ref|YP_005279815.1| lysyl-tRNA synthetase [Escherichia coli KO11FL]
gi|386597352|ref|YP_006093752.1| lysyl-tRNA synthetase [Escherichia coli DH1]
gi|386611530|ref|YP_006127016.1| lysine tRNA synthetase, inducible [Escherichia coli W]
gi|386698844|ref|YP_006162681.1| lysyl-tRNA synthetase [Escherichia coli KO11FL]
gi|386707365|ref|YP_006171212.1| Lysyl-tRNA synthetase, heat inducible [Escherichia coli P12b]
gi|386712074|ref|YP_006175795.1| lysyl-tRNA synthetase [Escherichia coli W]
gi|387509588|ref|YP_006161844.1| lysyl-tRNA synthetase [Escherichia coli O55:H7 str. RM12579]
gi|387614863|ref|YP_006117979.1| lysyl-tRNA synthetase [Escherichia coli ETEC H10407]
gi|387623762|ref|YP_006131390.1| lysyl-tRNA synthetase [Escherichia coli DH1]
gi|387885354|ref|YP_006315656.1| lysyl-tRNA synthetase [Escherichia coli Xuzhou21]
gi|388480078|ref|YP_492273.1| lysine tRNA synthetase, inducible [Escherichia coli str. K-12
substr. W3110]
gi|404373055|ref|ZP_10978328.1| lysyl-tRNA synthetase, heat inducible [Escherichia sp. 1_1_43]
gi|407467135|ref|YP_006786423.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. 2009EL-2071]
gi|407484144|ref|YP_006781294.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. 2011C-3493]
gi|410484690|ref|YP_006772236.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. 2009EL-2050]
gi|415797433|ref|ZP_11498009.1| lysyl-tRNA synthetase [Escherichia coli E128010]
gi|415831963|ref|ZP_11517514.1| lysyl-tRNA synthetase [Escherichia coli OK1357]
gi|415865865|ref|ZP_11538606.1| lysyl-tRNA synthetase [Escherichia coli MS 85-1]
gi|415879374|ref|ZP_11544716.1| lysine--tRNA ligase [Escherichia coli MS 79-10]
gi|416308925|ref|ZP_11655378.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044]
gi|416319380|ref|ZP_11661932.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212]
gi|416328335|ref|ZP_11668095.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125]
gi|416779417|ref|ZP_11876422.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101]
gi|416790615|ref|ZP_11881312.1| lysyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89]
gi|416802415|ref|ZP_11886200.1| lysyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687]
gi|416813239|ref|ZP_11891138.1| lysyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97]
gi|416823799|ref|ZP_11895741.1| lysyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905]
gi|416834047|ref|ZP_11900736.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61]
gi|417131945|ref|ZP_11976730.1| lysine--tRNA ligase [Escherichia coli 5.0588]
gi|417167318|ref|ZP_12000204.1| lysine--tRNA ligase [Escherichia coli 99.0741]
gi|417174707|ref|ZP_12004503.1| lysine--tRNA ligase [Escherichia coli 3.2608]
gi|417187046|ref|ZP_12011903.1| lysine--tRNA ligase [Escherichia coli 93.0624]
gi|417225355|ref|ZP_12028646.1| lysine--tRNA ligase [Escherichia coli 96.154]
gi|417249722|ref|ZP_12041506.1| lysine--tRNA ligase [Escherichia coli 4.0967]
gi|417260887|ref|ZP_12048380.1| lysine--tRNA ligase [Escherichia coli 2.3916]
gi|417269878|ref|ZP_12057238.1| lysine--tRNA ligase [Escherichia coli 3.3884]
gi|417273755|ref|ZP_12061100.1| lysine--tRNA ligase [Escherichia coli 2.4168]
gi|417279697|ref|ZP_12067002.1| lysine--tRNA ligase [Escherichia coli 3.2303]
gi|417293619|ref|ZP_12080898.1| lysine--tRNA ligase [Escherichia coli B41]
gi|417296521|ref|ZP_12083768.1| lysine--tRNA ligase [Escherichia coli 900105 (10e)]
gi|417599585|ref|ZP_12250202.1| lysyl-tRNA synthetase [Escherichia coli 3030-1]
gi|417605102|ref|ZP_12255659.1| lysyl-tRNA synthetase [Escherichia coli STEC_94C]
gi|417615812|ref|ZP_12266256.1| lysyl-tRNA synthetase [Escherichia coli STEC_EH250]
gi|417620838|ref|ZP_12271234.1| lysyl-tRNA synthetase [Escherichia coli G58-1]
gi|417626421|ref|ZP_12276704.1| lysyl-tRNA synthetase [Escherichia coli STEC_H.1.8]
gi|417637101|ref|ZP_12287302.1| lysyl-tRNA synthetase [Escherichia coli STEC_S1191]
gi|417642175|ref|ZP_12292296.1| lysyl-tRNA synthetase [Escherichia coli TX1999]
gi|417669759|ref|ZP_12319288.1| lysyl-tRNA synthetase [Escherichia coli STEC_O31]
gi|417807829|ref|ZP_12454755.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. LB226692]
gi|417835567|ref|ZP_12482006.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. 01-09591]
gi|417867493|ref|ZP_12512529.1| hypothetical protein C22711_4420 [Escherichia coli O104:H4 str.
C227-11]
gi|417947338|ref|ZP_12590529.1| lysyl-tRNA synthetase [Escherichia coli XH140A]
gi|417976273|ref|ZP_12617067.1| lysyl-tRNA synthetase [Escherichia coli XH001]
gi|418305766|ref|ZP_12917560.1| lysyl-tRNA synthetase [Escherichia coli UMNF18]
gi|418941408|ref|ZP_13494737.1| lysyl-tRNA synthetase [Escherichia coli O157:H43 str. T22]
gi|418959980|ref|ZP_13511876.1| lysyl-tRNA synthetase [Escherichia coli J53]
gi|419054006|ref|ZP_13600869.1| lysyl-tRNA synthetase [Escherichia coli DEC3B]
gi|419060076|ref|ZP_13606870.1| lysyl-tRNA synthetase [Escherichia coli DEC3C]
gi|419078386|ref|ZP_13623876.1| lysyl-tRNA synthetase [Escherichia coli DEC3F]
gi|419083477|ref|ZP_13628915.1| lysyl-tRNA synthetase [Escherichia coli DEC4A]
gi|419089484|ref|ZP_13634828.1| lysyl-tRNA synthetase [Escherichia coli DEC4B]
gi|419095380|ref|ZP_13640649.1| lysyl-tRNA synthetase [Escherichia coli DEC4C]
gi|419101554|ref|ZP_13646735.1| lysyl-tRNA synthetase [Escherichia coli DEC4D]
gi|419112210|ref|ZP_13657255.1| lysyl-tRNA synthetase [Escherichia coli DEC4F]
gi|419117727|ref|ZP_13662729.1| lysyl-tRNA synthetase [Escherichia coli DEC5A]
gi|419123509|ref|ZP_13668444.1| lysyl-tRNA synthetase [Escherichia coli DEC5B]
gi|419129212|ref|ZP_13674075.1| lysyl-tRNA synthetase [Escherichia coli DEC5C]
gi|419139580|ref|ZP_13684364.1| lysyl-tRNA synthetase [Escherichia coli DEC5E]
gi|419151149|ref|ZP_13695791.1| lysyl-tRNA synthetase [Escherichia coli DEC6B]
gi|419162027|ref|ZP_13706513.1| lysyl-tRNA synthetase [Escherichia coli DEC6D]
gi|419167114|ref|ZP_13711556.1| lysyl-tRNA synthetase [Escherichia coli DEC6E]
gi|419173131|ref|ZP_13716996.1| lysyl-tRNA synthetase [Escherichia coli DEC7A]
gi|419177867|ref|ZP_13721666.1| lysyl-tRNA synthetase [Escherichia coli DEC7B]
gi|419183703|ref|ZP_13727283.1| lysyl-tRNA synthetase [Escherichia coli DEC7C]
gi|419194433|ref|ZP_13737866.1| lysyl-tRNA synthetase [Escherichia coli DEC7E]
gi|419212729|ref|ZP_13755784.1| lysyl-tRNA synthetase [Escherichia coli DEC8C]
gi|419218516|ref|ZP_13761500.1| lysyl-tRNA synthetase [Escherichia coli DEC8D]
gi|419240667|ref|ZP_13783365.1| lysyl-tRNA synthetase [Escherichia coli DEC9C]
gi|419246362|ref|ZP_13788986.1| lysyl-tRNA synthetase [Escherichia coli DEC9D]
gi|419252091|ref|ZP_13794652.1| lysyl-tRNA synthetase [Escherichia coli DEC9E]
gi|419257869|ref|ZP_13800361.1| lysyl-tRNA synthetase [Escherichia coli DEC10A]
gi|419264045|ref|ZP_13806446.1| lysyl-tRNA synthetase [Escherichia coli DEC10B]
gi|419280942|ref|ZP_13823175.1| lysyl-tRNA synthetase [Escherichia coli DEC10E]
gi|419287124|ref|ZP_13829278.1| lysyl-tRNA synthetase [Escherichia coli DEC10F]
gi|419292378|ref|ZP_13834456.1| lysyl-tRNA synthetase [Escherichia coli DEC11A]
gi|419297727|ref|ZP_13839756.1| lysyl-tRNA synthetase [Escherichia coli DEC11B]
gi|419303193|ref|ZP_13845179.1| lysyl-tRNA synthetase [Escherichia coli DEC11C]
gi|419309236|ref|ZP_13851120.1| lysyl-tRNA synthetase [Escherichia coli DEC11D]
gi|419314194|ref|ZP_13856046.1| lysyl-tRNA synthetase [Escherichia coli DEC11E]
gi|419319725|ref|ZP_13861515.1| lysyl-tRNA synthetase [Escherichia coli DEC12A]
gi|419325992|ref|ZP_13867670.1| lysyl-tRNA synthetase [Escherichia coli DEC12B]
gi|419331876|ref|ZP_13873462.1| lysyl-tRNA synthetase [Escherichia coli DEC12C]
gi|419337424|ref|ZP_13878927.1| lysyl-tRNA synthetase [Escherichia coli DEC12D]
gi|419342779|ref|ZP_13884224.1| lysyl-tRNA synthetase [Escherichia coli DEC12E]
gi|419347984|ref|ZP_13889344.1| lysyl-tRNA synthetase [Escherichia coli DEC13A]
gi|419352437|ref|ZP_13893758.1| lysyl-tRNA synthetase [Escherichia coli DEC13B]
gi|419362879|ref|ZP_13904079.1| lysyl-tRNA synthetase [Escherichia coli DEC13D]
gi|419367903|ref|ZP_13909042.1| lysyl-tRNA synthetase [Escherichia coli DEC13E]
gi|419378405|ref|ZP_13919413.1| lysyl-tRNA synthetase [Escherichia coli DEC14B]
gi|419383743|ref|ZP_13924674.1| lysyl-tRNA synthetase [Escherichia coli DEC14C]
gi|419388991|ref|ZP_13929845.1| lysyl-tRNA synthetase [Escherichia coli DEC14D]
gi|419394468|ref|ZP_13935259.1| lysyl-tRNA synthetase [Escherichia coli DEC15A]
gi|419399600|ref|ZP_13940354.1| lysyl-tRNA synthetase [Escherichia coli DEC15B]
gi|419404848|ref|ZP_13945559.1| lysyl-tRNA synthetase [Escherichia coli DEC15C]
gi|419410004|ref|ZP_13950683.1| lysyl-tRNA synthetase [Escherichia coli DEC15D]
gi|419415570|ref|ZP_13956196.1| lysyl-tRNA synthetase [Escherichia coli DEC15E]
gi|419810464|ref|ZP_14335345.1| lysyl-tRNA synthetase [Escherichia coli O32:H37 str. P4]
gi|419872966|ref|ZP_14394981.1| lysyl-tRNA synthetase [Escherichia coli O103:H2 str. CVM9450]
gi|419873617|ref|ZP_14395597.1| lysyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9534]
gi|419880400|ref|ZP_14401795.1| lysyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9545]
gi|419901049|ref|ZP_14420441.1| lysyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM9942]
gi|419909704|ref|ZP_14428242.1| lysyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10026]
gi|419929855|ref|ZP_14447519.1| lysyl-tRNA synthetase [Escherichia coli 541-1]
gi|419951071|ref|ZP_14467269.1| lysyl-tRNA synthetase [Escherichia coli CUMT8]
gi|420099589|ref|ZP_14610813.1| lysyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9455]
gi|420107703|ref|ZP_14618025.1| lysyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9553]
gi|420112347|ref|ZP_14622146.1| lysyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10021]
gi|420122329|ref|ZP_14631317.1| lysyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10030]
gi|420126409|ref|ZP_14635145.1| lysyl-tRNA ligase [Escherichia coli O26:H11 str. CVM10224]
gi|420130516|ref|ZP_14639008.1| lysyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM9952]
gi|420278315|ref|ZP_14780588.1| lysine--tRNA ligase [Escherichia coli PA40]
gi|420283617|ref|ZP_14785842.1| lysine--tRNA ligase [Escherichia coli TW06591]
gi|420284721|ref|ZP_14786941.1| lysine--tRNA ligase [Escherichia coli TW10246]
gi|420295337|ref|ZP_14797441.1| lysine--tRNA ligase [Escherichia coli TW11039]
gi|420301251|ref|ZP_14803289.1| lysine--tRNA ligase [Escherichia coli TW09109]
gi|420301445|ref|ZP_14803480.1| lysine--tRNA ligase [Escherichia coli TW10119]
gi|420312483|ref|ZP_14814404.1| lysine--tRNA ligase [Escherichia coli EC1738]
gi|420318305|ref|ZP_14820167.1| lysine--tRNA ligase [Escherichia coli EC1734]
gi|420388535|ref|ZP_14887859.1| lysyl-tRNA synthetase [Escherichia coli EPECa12]
gi|420394302|ref|ZP_14893539.1| lysyl-tRNA synthetase [Escherichia coli EPEC C342-62]
gi|421776330|ref|ZP_16212935.1| lysyl-tRNA synthetase [Escherichia coli AD30]
gi|421815255|ref|ZP_16250946.1| lysine--tRNA ligase [Escherichia coli 8.0416]
gi|421820999|ref|ZP_16256476.1| lysine--tRNA ligase [Escherichia coli 10.0821]
gi|421827058|ref|ZP_16262404.1| lysine--tRNA ligase [Escherichia coli FRIK920]
gi|421828009|ref|ZP_16263341.1| lysine--tRNA ligase [Escherichia coli PA7]
gi|422354837|ref|ZP_16435562.1| lysyl-tRNA synthetase [Escherichia coli MS 117-3]
gi|422761444|ref|ZP_16815202.1| lysyl-tRNA synthetase [Escherichia coli E1167]
gi|422768006|ref|ZP_16821731.1| lysyl-tRNA synthetase [Escherichia coli E1520]
gi|422772689|ref|ZP_16826376.1| lysyl-tRNA synthetase [Escherichia coli E482]
gi|422776332|ref|ZP_16829986.1| lysyl-tRNA synthetase [Escherichia coli H120]
gi|422815670|ref|ZP_16863885.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli M919]
gi|422832599|ref|ZP_16880668.1| lysyl-tRNA synthetase [Escherichia coli E101]
gi|422990392|ref|ZP_16981164.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. C227-11]
gi|422997288|ref|ZP_16988050.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. C236-11]
gi|423002384|ref|ZP_16993135.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. 09-7901]
gi|423006040|ref|ZP_16996785.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. 04-8351]
gi|423012603|ref|ZP_17003333.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. 11-3677]
gi|423021834|ref|ZP_17012538.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. 11-4404]
gi|423026988|ref|ZP_17017682.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. 11-4522]
gi|423032817|ref|ZP_17023503.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. 11-4623]
gi|423035693|ref|ZP_17026369.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. 11-4632 C1]
gi|423040812|ref|ZP_17031480.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. 11-4632 C2]
gi|423047498|ref|ZP_17038156.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. 11-4632 C3]
gi|423056036|ref|ZP_17044842.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. 11-4632 C4]
gi|423058041|ref|ZP_17046839.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. 11-4632 C5]
gi|423708442|ref|ZP_17682822.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli B799]
gi|423728445|ref|ZP_17702181.1| lysine--tRNA ligase [Escherichia coli PA31]
gi|424080499|ref|ZP_17817429.1| lysine--tRNA ligase [Escherichia coli FDA505]
gi|424086909|ref|ZP_17823369.1| lysine--tRNA ligase [Escherichia coli FDA517]
gi|424100024|ref|ZP_17835244.1| lysine--tRNA ligase [Escherichia coli FRIK1985]
gi|424106218|ref|ZP_17840916.1| lysine--tRNA ligase [Escherichia coli FRIK1990]
gi|424112828|ref|ZP_17847032.1| lysine--tRNA ligase [Escherichia coli 93-001]
gi|424118777|ref|ZP_17852586.1| lysine--tRNA ligase [Escherichia coli PA3]
gi|424124961|ref|ZP_17858233.1| lysine--tRNA ligase [Escherichia coli PA5]
gi|424131143|ref|ZP_17864021.1| lysine--tRNA ligase [Escherichia coli PA9]
gi|424137462|ref|ZP_17869869.1| lysine--tRNA ligase [Escherichia coli PA10]
gi|424143998|ref|ZP_17875823.1| lysine--tRNA ligase [Escherichia coli PA14]
gi|424150363|ref|ZP_17881716.1| lysine--tRNA ligase [Escherichia coli PA15]
gi|424169050|ref|ZP_17887155.1| lysine--tRNA ligase [Escherichia coli PA24]
gi|424259431|ref|ZP_17892693.1| lysine--tRNA ligase [Escherichia coli PA25]
gi|424336449|ref|ZP_17898630.1| lysine--tRNA ligase [Escherichia coli PA28]
gi|424452709|ref|ZP_17904320.1| lysine--tRNA ligase [Escherichia coli PA32]
gi|424458869|ref|ZP_17909937.1| lysine--tRNA ligase [Escherichia coli PA33]
gi|424465428|ref|ZP_17915706.1| lysine--tRNA ligase [Escherichia coli PA39]
gi|424471647|ref|ZP_17921417.1| lysine--tRNA ligase [Escherichia coli PA41]
gi|424478115|ref|ZP_17927408.1| lysine--tRNA ligase [Escherichia coli PA42]
gi|424483918|ref|ZP_17932873.1| lysine--tRNA ligase [Escherichia coli TW07945]
gi|424490117|ref|ZP_17938624.1| lysine--tRNA ligase [Escherichia coli TW09098]
gi|424496838|ref|ZP_17944309.1| lysine--tRNA ligase [Escherichia coli TW09195]
gi|424503433|ref|ZP_17950292.1| lysine--tRNA ligase [Escherichia coli EC4203]
gi|424509708|ref|ZP_17956045.1| lysine--tRNA ligase [Escherichia coli EC4196]
gi|424517128|ref|ZP_17961673.1| lysine--tRNA ligase [Escherichia coli TW14313]
gi|424523243|ref|ZP_17967318.1| lysine--tRNA ligase [Escherichia coli TW14301]
gi|424529088|ref|ZP_17972778.1| lysine--tRNA ligase [Escherichia coli EC4421]
gi|424535229|ref|ZP_17978556.1| lysine--tRNA ligase [Escherichia coli EC4422]
gi|424541336|ref|ZP_17984256.1| lysine--tRNA ligase [Escherichia coli EC4013]
gi|424547490|ref|ZP_17989788.1| lysine--tRNA ligase [Escherichia coli EC4402]
gi|424553689|ref|ZP_17995487.1| lysine--tRNA ligase [Escherichia coli EC4439]
gi|424559884|ref|ZP_18001252.1| lysine--tRNA ligase [Escherichia coli EC4436]
gi|424566208|ref|ZP_18007186.1| lysine--tRNA ligase [Escherichia coli EC4437]
gi|424572339|ref|ZP_18012845.1| lysine--tRNA ligase [Escherichia coli EC4448]
gi|424578495|ref|ZP_18018501.1| lysine--tRNA ligase [Escherichia coli EC1845]
gi|424584314|ref|ZP_18023936.1| lysine--tRNA ligase [Escherichia coli EC1863]
gi|424751430|ref|ZP_18179460.1| lysyl-tRNA ligase [Escherichia coli O26:H11 str. CFSAN001629]
gi|424758105|ref|ZP_18185827.1| lysyl-tRNA ligase [Escherichia coli O111:H11 str. CFSAN001630]
gi|425100968|ref|ZP_18503682.1| lysine--tRNA ligase [Escherichia coli 3.4870]
gi|425107065|ref|ZP_18509354.1| lysine--tRNA ligase [Escherichia coli 5.2239]
gi|425113046|ref|ZP_18514945.1| lysine--tRNA ligase [Escherichia coli 6.0172]
gi|425117771|ref|ZP_18519538.1| lysine--tRNA ligase [Escherichia coli 8.0566]
gi|425122486|ref|ZP_18524149.1| lysine--tRNA ligase [Escherichia coli 8.0569]
gi|425129019|ref|ZP_18530165.1| lysine--tRNA ligase [Escherichia coli 8.0586]
gi|425134761|ref|ZP_18535588.1| lysine--tRNA ligase [Escherichia coli 8.2524]
gi|425141354|ref|ZP_18541711.1| lysine--tRNA ligase [Escherichia coli 10.0833]
gi|425147031|ref|ZP_18547000.1| lysine--tRNA ligase [Escherichia coli 10.0869]
gi|425153142|ref|ZP_18552732.1| lysine--tRNA ligase [Escherichia coli 88.0221]
gi|425159045|ref|ZP_18558284.1| lysine--tRNA ligase [Escherichia coli PA34]
gi|425159502|ref|ZP_18558712.1| lysine--tRNA ligase [Escherichia coli FDA506]
gi|425171099|ref|ZP_18569551.1| lysine--tRNA ligase [Escherichia coli FDA507]
gi|425177135|ref|ZP_18575232.1| lysine--tRNA ligase [Escherichia coli FDA504]
gi|425183214|ref|ZP_18580886.1| lysine--tRNA ligase [Escherichia coli FRIK1999]
gi|425189499|ref|ZP_18586748.1| lysine--tRNA ligase [Escherichia coli FRIK1997]
gi|425196246|ref|ZP_18592991.1| lysine--tRNA ligase [Escherichia coli NE1487]
gi|425202726|ref|ZP_18598909.1| lysine--tRNA ligase [Escherichia coli NE037]
gi|425203089|ref|ZP_18599251.1| lysine--tRNA ligase [Escherichia coli FRIK2001]
gi|425214881|ref|ZP_18610262.1| lysine--tRNA ligase [Escherichia coli PA4]
gi|425220964|ref|ZP_18615905.1| lysine--tRNA ligase [Escherichia coli PA23]
gi|425227620|ref|ZP_18622063.1| lysine--tRNA ligase [Escherichia coli PA49]
gi|425233766|ref|ZP_18627783.1| lysine--tRNA ligase [Escherichia coli PA45]
gi|425239688|ref|ZP_18633386.1| lysine--tRNA ligase [Escherichia coli TT12B]
gi|425245944|ref|ZP_18639227.1| lysine--tRNA ligase [Escherichia coli MA6]
gi|425252081|ref|ZP_18645003.1| lysine--tRNA ligase [Escherichia coli 5905]
gi|425257936|ref|ZP_18650407.1| lysine--tRNA ligase [Escherichia coli CB7326]
gi|425264189|ref|ZP_18656155.1| lysine--tRNA ligase [Escherichia coli EC96038]
gi|425270200|ref|ZP_18661802.1| lysine--tRNA ligase [Escherichia coli 5412]
gi|425275494|ref|ZP_18666865.1| lysine--tRNA ligase [Escherichia coli TW15901]
gi|425286049|ref|ZP_18677054.1| lysine--tRNA ligase [Escherichia coli TW00353]
gi|425297666|ref|ZP_18687757.1| lysine--tRNA ligase [Escherichia coli PA38]
gi|425314351|ref|ZP_18703493.1| lysine--tRNA ligase [Escherichia coli EC1735]
gi|425320330|ref|ZP_18709084.1| lysine--tRNA ligase [Escherichia coli EC1736]
gi|425326484|ref|ZP_18714781.1| lysine--tRNA ligase [Escherichia coli EC1737]
gi|425332787|ref|ZP_18720572.1| lysine--tRNA ligase [Escherichia coli EC1846]
gi|425338966|ref|ZP_18726277.1| lysine--tRNA ligase [Escherichia coli EC1847]
gi|425345256|ref|ZP_18732120.1| lysine--tRNA ligase [Escherichia coli EC1848]
gi|425351094|ref|ZP_18737529.1| lysine--tRNA ligase [Escherichia coli EC1849]
gi|425357365|ref|ZP_18743403.1| lysine--tRNA ligase [Escherichia coli EC1850]
gi|425363320|ref|ZP_18748943.1| lysine--tRNA ligase [Escherichia coli EC1856]
gi|425369584|ref|ZP_18754632.1| lysine--tRNA ligase [Escherichia coli EC1862]
gi|425375888|ref|ZP_18760502.1| lysine--tRNA ligase [Escherichia coli EC1864]
gi|425382544|ref|ZP_18766510.1| lysine--tRNA ligase [Escherichia coli EC1865]
gi|425388775|ref|ZP_18772311.1| lysine--tRNA ligase [Escherichia coli EC1866]
gi|425395503|ref|ZP_18778585.1| lysine--tRNA ligase [Escherichia coli EC1868]
gi|425401559|ref|ZP_18784241.1| lysine--tRNA ligase [Escherichia coli EC1869]
gi|425407655|ref|ZP_18789852.1| lysine--tRNA ligase [Escherichia coli EC1870]
gi|425413993|ref|ZP_18795732.1| lysine--tRNA ligase [Escherichia coli NE098]
gi|425420313|ref|ZP_18801562.1| lysine--tRNA ligase [Escherichia coli FRIK523]
gi|425431608|ref|ZP_18812194.1| lysine--tRNA ligase [Escherichia coli 0.1304]
gi|427807354|ref|ZP_18974421.1| lysine tRNA synthetase, inducible; heat shock protein [Escherichia
coli chi7122]
gi|427811938|ref|ZP_18979003.1| lysine tRNA synthetase, inducible; heat shock protein [Escherichia
coli]
gi|428950029|ref|ZP_19022276.1| lysine--tRNA ligase [Escherichia coli 88.1467]
gi|428956085|ref|ZP_19027853.1| lysine--tRNA ligase [Escherichia coli 88.1042]
gi|428962140|ref|ZP_19033395.1| lysine--tRNA ligase [Escherichia coli 89.0511]
gi|428968731|ref|ZP_19039410.1| lysine--tRNA ligase [Escherichia coli 90.0091]
gi|428974457|ref|ZP_19044744.1| lysine--tRNA ligase [Escherichia coli 90.0039]
gi|428980906|ref|ZP_19050686.1| lysine--tRNA ligase [Escherichia coli 90.2281]
gi|428986617|ref|ZP_19055983.1| lysine--tRNA ligase [Escherichia coli 93.0055]
gi|428992797|ref|ZP_19061763.1| lysine--tRNA ligase [Escherichia coli 93.0056]
gi|428998690|ref|ZP_19067260.1| lysine--tRNA ligase [Escherichia coli 94.0618]
gi|429005162|ref|ZP_19073196.1| lysine--tRNA ligase [Escherichia coli 95.0183]
gi|429011180|ref|ZP_19078541.1| lysine--tRNA ligase [Escherichia coli 95.1288]
gi|429017589|ref|ZP_19084443.1| lysine--tRNA ligase [Escherichia coli 95.0943]
gi|429023343|ref|ZP_19089835.1| lysine--tRNA ligase [Escherichia coli 96.0428]
gi|429029510|ref|ZP_19095458.1| lysine--tRNA ligase [Escherichia coli 96.0427]
gi|429035674|ref|ZP_19101170.1| lysine--tRNA ligase [Escherichia coli 96.0939]
gi|429041786|ref|ZP_19106846.1| lysine--tRNA ligase [Escherichia coli 96.0932]
gi|429047568|ref|ZP_19112258.1| lysine--tRNA ligase [Escherichia coli 96.0107]
gi|429052981|ref|ZP_19117532.1| lysine--tRNA ligase [Escherichia coli 97.0003]
gi|429058535|ref|ZP_19122752.1| lysine--tRNA ligase [Escherichia coli 97.1742]
gi|429064050|ref|ZP_19127985.1| lysine--tRNA ligase [Escherichia coli 97.0007]
gi|429070288|ref|ZP_19133696.1| lysine--tRNA ligase [Escherichia coli 99.0672]
gi|429076050|ref|ZP_19139285.1| lysine--tRNA ligase [Escherichia coli 99.0678]
gi|429081233|ref|ZP_19144353.1| lysine--tRNA ligase [Escherichia coli 99.0713]
gi|429721875|ref|ZP_19256786.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. Ec11-9450]
gi|429773953|ref|ZP_19305962.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. 11-02030]
gi|429779138|ref|ZP_19311099.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. 11-02033-1]
gi|429782973|ref|ZP_19314893.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. 11-02092]
gi|429788366|ref|ZP_19320248.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. 11-02093]
gi|429794804|ref|ZP_19326640.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. 11-02281]
gi|429800764|ref|ZP_19332548.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. 11-02318]
gi|429804377|ref|ZP_19336129.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. 11-02913]
gi|429809202|ref|ZP_19340912.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. 11-03439]
gi|429814966|ref|ZP_19346631.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. 11-04080]
gi|429820170|ref|ZP_19351794.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. 11-03943]
gi|429829422|ref|ZP_19360393.1| lysine--tRNA ligase [Escherichia coli 96.0109]
gi|429835901|ref|ZP_19366111.1| lysine--tRNA ligase [Escherichia coli 97.0010]
gi|429906244|ref|ZP_19372216.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. Ec11-9990]
gi|429910378|ref|ZP_19376336.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. Ec11-9941]
gi|429916276|ref|ZP_19382219.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. Ec11-4984]
gi|429921324|ref|ZP_19387248.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. Ec11-5604]
gi|429927129|ref|ZP_19393038.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. Ec11-4986]
gi|429931062|ref|ZP_19396959.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. Ec11-4987]
gi|429937603|ref|ZP_19403487.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. Ec11-4988]
gi|429943281|ref|ZP_19409152.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. Ec11-5603]
gi|429945962|ref|ZP_19411820.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. Ec11-6006]
gi|429953527|ref|ZP_19419369.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. Ec12-0465]
gi|429956870|ref|ZP_19422700.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. Ec12-0466]
gi|432367723|ref|ZP_19610832.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE10]
gi|432374702|ref|ZP_19617727.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE11]
gi|432379372|ref|ZP_19622349.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE12]
gi|432414630|ref|ZP_19657271.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE44]
gi|432452410|ref|ZP_19694660.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE193]
gi|432487932|ref|ZP_19729832.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE212]
gi|432531923|ref|ZP_19768939.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE234]
gi|432578408|ref|ZP_19814848.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE56]
gi|432625305|ref|ZP_19861298.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE77]
gi|432635043|ref|ZP_19870935.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE81]
gi|432658975|ref|ZP_19894644.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE111]
gi|432668569|ref|ZP_19904130.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE119]
gi|432683609|ref|ZP_19918937.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE156]
gi|432689458|ref|ZP_19924716.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE161]
gi|432735182|ref|ZP_19969989.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE42]
gi|432763034|ref|ZP_19997492.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE48]
gi|432811877|ref|ZP_20045729.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE101]
gi|432829741|ref|ZP_20063353.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE135]
gi|432832796|ref|ZP_20066346.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE136]
gi|432857672|ref|ZP_20084462.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE146]
gi|432878778|ref|ZP_20095975.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE154]
gi|432951727|ref|ZP_20145122.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE197]
gi|432965895|ref|ZP_20154815.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE203]
gi|433036076|ref|ZP_20223754.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE112]
gi|433050606|ref|ZP_20237915.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE120]
gi|433094528|ref|ZP_20280770.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE138]
gi|433132725|ref|ZP_20318139.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE163]
gi|433176073|ref|ZP_20360565.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE232]
gi|442594775|ref|ZP_21012654.1| Lysyl-tRNA synthetase (class II) [Escherichia coli O10:K5(L):H4
str. ATCC 23506]
gi|443615643|ref|YP_007379499.1| lysyl-tRNA ligase [Escherichia coli APEC O78]
gi|444927925|ref|ZP_21247169.1| lysine--tRNA ligase [Escherichia coli 09BKT078844]
gi|444933553|ref|ZP_21252540.1| lysine--tRNA ligase [Escherichia coli 99.0814]
gi|444938996|ref|ZP_21257705.1| lysine--tRNA ligase [Escherichia coli 99.0815]
gi|444944621|ref|ZP_21263087.1| lysine--tRNA ligase [Escherichia coli 99.0816]
gi|444950022|ref|ZP_21268298.1| lysine--tRNA ligase [Escherichia coli 99.0839]
gi|444954374|ref|ZP_21272459.1| lysine--tRNA ligase [Escherichia coli 99.0848]
gi|444961118|ref|ZP_21278917.1| lysine--tRNA ligase [Escherichia coli 99.1753]
gi|444966311|ref|ZP_21283850.1| lysine--tRNA ligase [Escherichia coli 99.1775]
gi|444972403|ref|ZP_21289724.1| lysine--tRNA ligase [Escherichia coli 99.1793]
gi|444977653|ref|ZP_21294703.1| lysine--tRNA ligase [Escherichia coli 99.1805]
gi|444983040|ref|ZP_21299928.1| lysine--tRNA ligase [Escherichia coli ATCC 700728]
gi|444988385|ref|ZP_21305146.1| lysine--tRNA ligase [Escherichia coli PA11]
gi|444993780|ref|ZP_21310405.1| lysine--tRNA ligase [Escherichia coli PA19]
gi|444998963|ref|ZP_21315447.1| lysine--tRNA ligase [Escherichia coli PA13]
gi|445004519|ref|ZP_21320892.1| lysine--tRNA ligase [Escherichia coli PA2]
gi|445009941|ref|ZP_21326152.1| lysine--tRNA ligase [Escherichia coli PA47]
gi|445015038|ref|ZP_21331126.1| lysine--tRNA ligase [Escherichia coli PA48]
gi|445020895|ref|ZP_21336842.1| lysine--tRNA ligase [Escherichia coli PA8]
gi|445026336|ref|ZP_21342141.1| lysine--tRNA ligase [Escherichia coli 7.1982]
gi|445031728|ref|ZP_21347377.1| lysine--tRNA ligase [Escherichia coli 99.1781]
gi|445037189|ref|ZP_21352697.1| lysine--tRNA ligase [Escherichia coli 99.1762]
gi|445042889|ref|ZP_21358243.1| lysine--tRNA ligase [Escherichia coli PA35]
gi|445048022|ref|ZP_21363255.1| lysine--tRNA ligase [Escherichia coli 3.4880]
gi|445061586|ref|ZP_21374088.1| lysine--tRNA ligase [Escherichia coli 99.0670]
gi|450254674|ref|ZP_21902608.1| lysyl-tRNA ligase [Escherichia coli S17]
gi|452968801|ref|ZP_21967028.1| lysyl-tRNA ligase [Escherichia coli O157:H7 str. EC4009]
gi|67473144|sp|P0A8N5.2|SYK2_ECOLI RecName: Full=Lysine--tRNA ligase, heat inducible; AltName:
Full=Lysyl-tRNA synthetase; Short=LysRS
gi|67473145|sp|P0A8N6.2|SYK2_ECO57 RecName: Full=Lysine--tRNA ligase, heat inducible; AltName:
Full=Lysyl-tRNA synthetase; Short=LysRS
gi|12519106|gb|AAG59329.1|AE005646_8 lysine tRNA synthetase, inducible; heat shock protein [Escherichia
coli O157:H7 str. EDL933]
gi|398703|emb|CAA34542.1| unnamed protein product [Escherichia coli]
gi|536974|gb|AAA97029.1| lysyl-tRNA synthetase [Escherichia coli str. K-12 substr. MG1655]
gi|1790571|gb|AAC77090.1| lysine tRNA synthetase, inducible [Escherichia coli str. K-12
substr. MG1655]
gi|13364588|dbj|BAB38534.1| lysine tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
gi|85676882|dbj|BAE78132.1| lysine tRNA synthetase, inducible [Escherichia coli str. K12
substr. W3110]
gi|157069275|gb|ABV08530.1| lysyl-tRNA synthetase [Escherichia coli HS]
gi|169891414|gb|ACB05121.1| lysine tRNA synthetase, inducible [Escherichia coli str. K-12
substr. DH10B]
gi|187769884|gb|EDU33728.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4196]
gi|188017408|gb|EDU55530.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4113]
gi|188488978|gb|EDU64081.1| lysyl-tRNA synthetase LysU [Escherichia coli 53638]
gi|189001831|gb|EDU70817.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4076]
gi|189357458|gb|EDU75877.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4401]
gi|189364021|gb|EDU82440.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4486]
gi|189368520|gb|EDU86936.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4501]
gi|189375037|gb|EDU93453.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC869]
gi|189379164|gb|EDU97580.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC508]
gi|192931307|gb|EDV83909.1| lysyl-tRNA synthetase LysU [Escherichia coli E22]
gi|194415153|gb|EDX31422.1| lysyl-tRNA synthetase LysU [Escherichia coli B171]
gi|208726904|gb|EDZ76505.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4206]
gi|208735239|gb|EDZ83926.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4045]
gi|208740055|gb|EDZ87737.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4042]
gi|209162047|gb|ACI39480.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4115]
gi|209750618|gb|ACI73616.1| lysine tRNA synthetase [Escherichia coli]
gi|209750620|gb|ACI73617.1| lysine tRNA synthetase [Escherichia coli]
gi|209750622|gb|ACI73618.1| lysine tRNA synthetase [Escherichia coli]
gi|209750624|gb|ACI73619.1| lysine tRNA synthetase [Escherichia coli]
gi|209750626|gb|ACI73620.1| lysine tRNA synthetase [Escherichia coli]
gi|209914879|dbj|BAG79953.1| lysyl-tRNA synthase [Escherichia coli SE11]
gi|217322409|gb|EEC30833.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. TW14588]
gi|218354564|emb|CAV01470.1| lysine tRNA synthetase, inducible [Escherichia coli 55989]
gi|218363451|emb|CAR01105.1| lysine tRNA synthetase, inducible [Escherichia coli IAI1]
gi|238861695|gb|ACR63693.1| lysine tRNA synthetase, inducible [Escherichia coli BW2952]
gi|254595552|gb|ACT74913.1| lysine tRNA synthetase, inducible [Escherichia coli O157:H7 str.
TW14359]
gi|257756882|dbj|BAI28384.1| lysine tRNA synthetase LysU, inducible [Escherichia coli O26:H11
str. 11368]
gi|257762071|dbj|BAI33568.1| lysine tRNA synthetase LysU, inducible [Escherichia coli O103:H2
str. 12009]
gi|260451041|gb|ACX41463.1| lysyl-tRNA synthetase [Escherichia coli DH1]
gi|290765419|gb|ADD59380.1| Lysyl-tRNA synthetase, heat inducible [Escherichia coli O55:H7 str.
CB9615]
gi|291320895|gb|EFE60337.1| lysyl-tRNA synthetase [Escherichia coli B088]
gi|291430354|gb|EFF03352.1| lysyl-tRNA synthetase [Escherichia coli B185]
gi|299878984|gb|EFI87195.1| lysyl-tRNA synthetase [Escherichia coli MS 196-1]
gi|300318762|gb|EFJ68546.1| lysyl-tRNA synthetase [Escherichia coli MS 175-1]
gi|300401741|gb|EFJ85279.1| lysyl-tRNA synthetase [Escherichia coli MS 84-1]
gi|300412180|gb|EFJ95490.1| lysyl-tRNA synthetase [Escherichia coli MS 115-1]
gi|300452701|gb|EFK16321.1| lysyl-tRNA synthetase [Escherichia coli MS 116-1]
gi|300526109|gb|EFK47178.1| lysyl-tRNA synthetase [Escherichia coli MS 119-7]
gi|300529463|gb|EFK50525.1| lysyl-tRNA synthetase [Escherichia coli MS 107-1]
gi|300838698|gb|EFK66458.1| lysyl-tRNA synthetase [Escherichia coli MS 124-1]
gi|301076963|gb|EFK91769.1| lysyl-tRNA synthetase [Escherichia coli MS 146-1]
gi|306907840|gb|EFN38341.1| lysyl-tRNA synthetase [Escherichia coli W]
gi|309704599|emb|CBJ03949.1| lysyl-tRNA synthetase [Escherichia coli ETEC H10407]
gi|315063447|gb|ADT77774.1| lysine tRNA synthetase, inducible [Escherichia coli W]
gi|315138686|dbj|BAJ45845.1| lysyl-tRNA synthetase [Escherichia coli DH1]
gi|315253814|gb|EFU33782.1| lysyl-tRNA synthetase [Escherichia coli MS 85-1]
gi|320190736|gb|EFW65386.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212]
gi|320638889|gb|EFX08535.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101]
gi|320644258|gb|EFX13323.1| lysyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89]
gi|320649576|gb|EFX18100.1| lysyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687]
gi|320654972|gb|EFX22933.1| lysyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97 TW
07815]
gi|320660479|gb|EFX27940.1| lysyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905]
gi|320665749|gb|EFX32786.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61]
gi|323162115|gb|EFZ47984.1| lysyl-tRNA synthetase [Escherichia coli E128010]
gi|323182237|gb|EFZ67647.1| lysyl-tRNA synthetase [Escherichia coli OK1357]
gi|323380483|gb|ADX52751.1| lysyl-tRNA synthetase [Escherichia coli KO11FL]
gi|323935444|gb|EGB31782.1| lysyl-tRNA synthetase [Escherichia coli E1520]
gi|323940049|gb|EGB36243.1| lysyl-tRNA synthetase [Escherichia coli E482]
gi|323946124|gb|EGB42159.1| lysyl-tRNA synthetase [Escherichia coli H120]
gi|324017207|gb|EGB86426.1| lysyl-tRNA synthetase [Escherichia coli MS 117-3]
gi|324118698|gb|EGC12590.1| lysyl-tRNA synthetase [Escherichia coli E1167]
gi|326341816|gb|EGD65599.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125]
gi|326346608|gb|EGD70342.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044]
gi|331035853|gb|EGI08091.1| lysine--tRNA ligase [Escherichia coli H736]
gi|331061908|gb|EGI33833.1| lysine--tRNA ligase [Escherichia coli TA271]
gi|331071724|gb|EGI43060.1| lysine--tRNA ligase [Escherichia coli H591]
gi|339417864|gb|AEJ59536.1| lysyl-tRNA synthetase [Escherichia coli UMNF18]
gi|340732147|gb|EGR61286.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. 01-09591]
gi|340737725|gb|EGR71980.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. LB226692]
gi|341920782|gb|EGT70387.1| hypothetical protein C22711_4420 [Escherichia coli O104:H4 str.
C227-11]
gi|342360941|gb|EGU25097.1| lysyl-tRNA synthetase [Escherichia coli XH140A]
gi|342926865|gb|EGU95587.1| lysine--tRNA ligase [Escherichia coli MS 79-10]
gi|344193975|gb|EGV48051.1| lysyl-tRNA synthetase [Escherichia coli XH001]
gi|345346404|gb|EGW78734.1| lysyl-tRNA synthetase [Escherichia coli STEC_94C]
gi|345347050|gb|EGW79365.1| lysyl-tRNA synthetase [Escherichia coli 3030-1]
gi|345356427|gb|EGW88629.1| lysyl-tRNA synthetase [Escherichia coli STEC_EH250]
gi|345368503|gb|EGX00501.1| lysyl-tRNA synthetase [Escherichia coli G58-1]
gi|345369971|gb|EGX01951.1| lysyl-tRNA synthetase [Escherichia coli STEC_H.1.8]
gi|345384383|gb|EGX14250.1| lysyl-tRNA synthetase [Escherichia coli STEC_S1191]
gi|345388983|gb|EGX18790.1| lysyl-tRNA synthetase [Escherichia coli TX1999]
gi|354856368|gb|EHF16828.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. C236-11]
gi|354860934|gb|EHF21375.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. 04-8351]
gi|354861459|gb|EHF21899.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. C227-11]
gi|354870164|gb|EHF30570.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. 09-7901]
gi|354874563|gb|EHF34931.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. 11-3677]
gi|354883805|gb|EHF44120.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. 11-4404]
gi|354888067|gb|EHF48330.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. 11-4522]
gi|354891751|gb|EHF51977.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. 11-4623]
gi|354903452|gb|EHF63554.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. 11-4632 C1]
gi|354907098|gb|EHF67165.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. 11-4632 C2]
gi|354909039|gb|EHF69076.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. 11-4632 C3]
gi|354911165|gb|EHF71171.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. 11-4632 C4]
gi|354919718|gb|EHF79660.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. 11-4632 C5]
gi|359334238|dbj|BAL40685.1| lysine tRNA synthetase, inducible [Escherichia coli str. K-12
substr. MDS42]
gi|371614748|gb|EHO03231.1| lysyl-tRNA synthetase [Escherichia coli E101]
gi|374361582|gb|AEZ43289.1| lysyl-tRNA synthetase [Escherichia coli O55:H7 str. RM12579]
gi|375323265|gb|EHS68981.1| lysyl-tRNA synthetase [Escherichia coli O157:H43 str. T22]
gi|377888396|gb|EHU52867.1| lysyl-tRNA synthetase [Escherichia coli DEC3B]
gi|377901143|gb|EHU65466.1| lysyl-tRNA synthetase [Escherichia coli DEC3C]
gi|377916229|gb|EHU80319.1| lysyl-tRNA synthetase [Escherichia coli DEC3F]
gi|377922513|gb|EHU86499.1| lysyl-tRNA synthetase [Escherichia coli DEC4A]
gi|377925408|gb|EHU89348.1| lysyl-tRNA synthetase [Escherichia coli DEC4B]
gi|377936110|gb|EHU99904.1| lysyl-tRNA synthetase [Escherichia coli DEC4D]
gi|377936227|gb|EHV00021.1| lysyl-tRNA synthetase [Escherichia coli DEC4C]
gi|377952836|gb|EHV16417.1| lysyl-tRNA synthetase [Escherichia coli DEC4F]
gi|377956126|gb|EHV19677.1| lysyl-tRNA synthetase [Escherichia coli DEC5A]
gi|377960763|gb|EHV24242.1| lysyl-tRNA synthetase [Escherichia coli DEC5B]
gi|377968430|gb|EHV31824.1| lysyl-tRNA synthetase [Escherichia coli DEC5C]
gi|377978378|gb|EHV41657.1| lysyl-tRNA synthetase [Escherichia coli DEC5E]
gi|377987713|gb|EHV50898.1| lysyl-tRNA synthetase [Escherichia coli DEC6B]
gi|378003139|gb|EHV66185.1| lysyl-tRNA synthetase [Escherichia coli DEC6D]
gi|378005414|gb|EHV68418.1| lysyl-tRNA synthetase [Escherichia coli DEC6E]
gi|378008087|gb|EHV71047.1| lysyl-tRNA synthetase [Escherichia coli DEC7A]
gi|378020473|gb|EHV83219.1| lysyl-tRNA synthetase [Escherichia coli DEC7C]
gi|378026720|gb|EHV89353.1| lysyl-tRNA synthetase [Escherichia coli DEC7B]
gi|378033301|gb|EHV95880.1| lysyl-tRNA synthetase [Escherichia coli DEC7E]
gi|378046805|gb|EHW09179.1| lysyl-tRNA synthetase [Escherichia coli DEC8C]
gi|378056832|gb|EHW19071.1| lysyl-tRNA synthetase [Escherichia coli DEC8D]
gi|378078180|gb|EHW40171.1| lysyl-tRNA synthetase [Escherichia coli DEC9C]
gi|378085541|gb|EHW47428.1| lysyl-tRNA synthetase [Escherichia coli DEC9D]
gi|378088442|gb|EHW50296.1| lysyl-tRNA synthetase [Escherichia coli DEC9E]
gi|378095517|gb|EHW57303.1| lysyl-tRNA synthetase [Escherichia coli DEC10A]
gi|378100812|gb|EHW62504.1| lysyl-tRNA synthetase [Escherichia coli DEC10B]
gi|378122474|gb|EHW83902.1| lysyl-tRNA synthetase [Escherichia coli DEC10E]
gi|378123149|gb|EHW84567.1| lysyl-tRNA synthetase [Escherichia coli DEC11A]
gi|378123965|gb|EHW85381.1| lysyl-tRNA synthetase [Escherichia coli DEC10F]
gi|378137520|gb|EHW98796.1| lysyl-tRNA synthetase [Escherichia coli DEC11B]
gi|378143179|gb|EHX04372.1| lysyl-tRNA synthetase [Escherichia coli DEC11D]
gi|378145122|gb|EHX06289.1| lysyl-tRNA synthetase [Escherichia coli DEC11C]
gi|378153884|gb|EHX14963.1| lysyl-tRNA synthetase [Escherichia coli DEC11E]
gi|378160066|gb|EHX21064.1| lysyl-tRNA synthetase [Escherichia coli DEC12B]
gi|378163368|gb|EHX24321.1| lysyl-tRNA synthetase [Escherichia coli DEC12A]
gi|378164270|gb|EHX25217.1| lysyl-tRNA synthetase [Escherichia coli DEC12C]
gi|378178347|gb|EHX39116.1| lysyl-tRNA synthetase [Escherichia coli DEC12D]
gi|378181257|gb|EHX41930.1| lysyl-tRNA synthetase [Escherichia coli DEC12E]
gi|378181596|gb|EHX42266.1| lysyl-tRNA synthetase [Escherichia coli DEC13A]
gi|378194992|gb|EHX55500.1| lysyl-tRNA synthetase [Escherichia coli DEC13B]
gi|378196995|gb|EHX57479.1| lysyl-tRNA synthetase [Escherichia coli DEC13D]
gi|378207574|gb|EHX67964.1| lysyl-tRNA synthetase [Escherichia coli DEC13E]
gi|378213263|gb|EHX73581.1| lysyl-tRNA synthetase [Escherichia coli DEC14B]
gi|378223040|gb|EHX83271.1| lysyl-tRNA synthetase [Escherichia coli DEC14C]
gi|378225874|gb|EHX86068.1| lysyl-tRNA synthetase [Escherichia coli DEC14D]
gi|378232367|gb|EHX92468.1| lysyl-tRNA synthetase [Escherichia coli DEC15A]
gi|378238750|gb|EHX98744.1| lysyl-tRNA synthetase [Escherichia coli DEC15B]
gi|378241603|gb|EHY01569.1| lysyl-tRNA synthetase [Escherichia coli DEC15C]
gi|378249469|gb|EHY09378.1| lysyl-tRNA synthetase [Escherichia coli DEC15D]
gi|378254672|gb|EHY14535.1| lysyl-tRNA synthetase [Escherichia coli DEC15E]
gi|383105533|gb|AFG43042.1| Lysyl-tRNA synthetase, heat inducible [Escherichia coli P12b]
gi|383390371|gb|AFH15329.1| lysyl-tRNA synthetase [Escherichia coli KO11FL]
gi|383407766|gb|AFH14009.1| lysyl-tRNA synthetase [Escherichia coli W]
gi|384377321|gb|EIE35216.1| lysyl-tRNA synthetase [Escherichia coli J53]
gi|385156815|gb|EIF18810.1| lysyl-tRNA synthetase [Escherichia coli O32:H37 str. P4]
gi|385540884|gb|EIF87698.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli M919]
gi|385708391|gb|EIG45404.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli B799]
gi|386149799|gb|EIH01088.1| lysine--tRNA ligase [Escherichia coli 5.0588]
gi|386171440|gb|EIH43484.1| lysine--tRNA ligase [Escherichia coli 99.0741]
gi|386177399|gb|EIH54878.1| lysine--tRNA ligase [Escherichia coli 3.2608]
gi|386181537|gb|EIH64298.1| lysine--tRNA ligase [Escherichia coli 93.0624]
gi|386200403|gb|EIH99394.1| lysine--tRNA ligase [Escherichia coli 96.154]
gi|386220043|gb|EII36507.1| lysine--tRNA ligase [Escherichia coli 4.0967]
gi|386225291|gb|EII47621.1| lysine--tRNA ligase [Escherichia coli 2.3916]
gi|386228683|gb|EII56039.1| lysine--tRNA ligase [Escherichia coli 3.3884]
gi|386233937|gb|EII65917.1| lysine--tRNA ligase [Escherichia coli 2.4168]
gi|386237413|gb|EII74358.1| lysine--tRNA ligase [Escherichia coli 3.2303]
gi|386251807|gb|EIJ01499.1| lysine--tRNA ligase [Escherichia coli B41]
gi|386259965|gb|EIJ15439.1| lysine--tRNA ligase [Escherichia coli 900105 (10e)]
gi|386798812|gb|AFJ31846.1| lysyl-tRNA synthetase [Escherichia coli Xuzhou21]
gi|388333121|gb|EIK99764.1| lysyl-tRNA synthetase [Escherichia coli O103:H2 str. CVM9450]
gi|388352289|gb|EIL17417.1| lysyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9534]
gi|388369286|gb|EIL32899.1| lysyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9545]
gi|388372601|gb|EIL36018.1| lysyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10026]
gi|388376863|gb|EIL39732.1| lysyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM9942]
gi|388402409|gb|EIL62981.1| lysyl-tRNA synthetase [Escherichia coli 541-1]
gi|388415482|gb|EIL75410.1| lysyl-tRNA synthetase [Escherichia coli CUMT8]
gi|390636702|gb|EIN16275.1| lysine--tRNA ligase [Escherichia coli FDA505]
gi|390637700|gb|EIN17242.1| lysine--tRNA ligase [Escherichia coli FDA517]
gi|390655332|gb|EIN33287.1| lysine--tRNA ligase [Escherichia coli FRIK1985]
gi|390656293|gb|EIN34179.1| lysine--tRNA ligase [Escherichia coli 93-001]
gi|390658084|gb|EIN35887.1| lysine--tRNA ligase [Escherichia coli FRIK1990]
gi|390673366|gb|EIN49610.1| lysine--tRNA ligase [Escherichia coli PA3]
gi|390676690|gb|EIN52779.1| lysine--tRNA ligase [Escherichia coli PA5]
gi|390680077|gb|EIN55933.1| lysine--tRNA ligase [Escherichia coli PA9]
gi|390691063|gb|EIN65831.1| lysine--tRNA ligase [Escherichia coli PA10]
gi|390695533|gb|EIN70060.1| lysine--tRNA ligase [Escherichia coli PA14]
gi|390696868|gb|EIN71309.1| lysine--tRNA ligase [Escherichia coli PA15]
gi|390716105|gb|EIN88924.1| lysine--tRNA ligase [Escherichia coli PA24]
gi|390717437|gb|EIN90222.1| lysine--tRNA ligase [Escherichia coli PA25]
gi|390723519|gb|EIN96114.1| lysine--tRNA ligase [Escherichia coli PA28]
gi|390736004|gb|EIO07364.1| lysine--tRNA ligase [Escherichia coli PA31]
gi|390736536|gb|EIO07869.1| lysine--tRNA ligase [Escherichia coli PA32]
gi|390740348|gb|EIO11486.1| lysine--tRNA ligase [Escherichia coli PA33]
gi|390755080|gb|EIO24630.1| lysine--tRNA ligase [Escherichia coli PA40]
gi|390755858|gb|EIO25380.1| lysine--tRNA ligase [Escherichia coli PA39]
gi|390760905|gb|EIO30214.1| lysine--tRNA ligase [Escherichia coli PA41]
gi|390764199|gb|EIO33413.1| lysine--tRNA ligase [Escherichia coli PA42]
gi|390778284|gb|EIO46042.1| lysine--tRNA ligase [Escherichia coli TW06591]
gi|390784547|gb|EIO52114.1| lysine--tRNA ligase [Escherichia coli TW07945]
gi|390792417|gb|EIO59771.1| lysine--tRNA ligase [Escherichia coli TW11039]
gi|390796509|gb|EIO63785.1| lysine--tRNA ligase [Escherichia coli TW10246]
gi|390799110|gb|EIO66288.1| lysine--tRNA ligase [Escherichia coli TW09098]
gi|390803986|gb|EIO70973.1| lysine--tRNA ligase [Escherichia coli TW09109]
gi|390820038|gb|EIO86344.1| lysine--tRNA ligase [Escherichia coli TW10119]
gi|390820754|gb|EIO87020.1| lysine--tRNA ligase [Escherichia coli TW09195]
gi|390821835|gb|EIO88005.1| lysine--tRNA ligase [Escherichia coli EC4203]
gi|390826895|gb|EIO92700.1| lysine--tRNA ligase [Escherichia coli EC4196]
gi|390839637|gb|EIP03733.1| lysine--tRNA ligase [Escherichia coli TW14313]
gi|390842039|gb|EIP05918.1| lysine--tRNA ligase [Escherichia coli TW14301]
gi|390847180|gb|EIP10729.1| lysine--tRNA ligase [Escherichia coli EC4421]
gi|390857703|gb|EIP20130.1| lysine--tRNA ligase [Escherichia coli EC4422]
gi|390862123|gb|EIP24336.1| lysine--tRNA ligase [Escherichia coli EC4013]
gi|390865595|gb|EIP27599.1| lysine--tRNA ligase [Escherichia coli EC4402]
gi|390874381|gb|EIP35511.1| lysine--tRNA ligase [Escherichia coli EC4439]
gi|390879597|gb|EIP40341.1| lysine--tRNA ligase [Escherichia coli EC4436]
gi|390889510|gb|EIP49235.1| lysine--tRNA ligase [Escherichia coli EC4437]
gi|390890687|gb|EIP50348.1| lysine--tRNA ligase [Escherichia coli EC4448]
gi|390897541|gb|EIP56861.1| lysine--tRNA ligase [Escherichia coli EC1738]
gi|390905197|gb|EIP64148.1| lysine--tRNA ligase [Escherichia coli EC1734]
gi|390914031|gb|EIP72582.1| lysine--tRNA ligase [Escherichia coli EC1845]
gi|390914878|gb|EIP73409.1| lysine--tRNA ligase [Escherichia coli EC1863]
gi|391300460|gb|EIQ58378.1| lysyl-tRNA synthetase [Escherichia coli EPECa12]
gi|391308804|gb|EIQ66494.1| lysyl-tRNA synthetase [Escherichia coli EPEC C342-62]
gi|394392290|gb|EJE69079.1| lysyl-tRNA ligase [Escherichia coli O26:H11 str. CVM10224]
gi|394412144|gb|EJE86322.1| lysyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9553]
gi|394414517|gb|EJE88458.1| lysyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10021]
gi|394422479|gb|EJE95840.1| lysyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10030]
gi|394422901|gb|EJE96214.1| lysyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9455]
gi|394433758|gb|EJF05765.1| lysyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM9952]
gi|397782214|gb|EJK93082.1| lysyl-tRNA synthetase [Escherichia coli STEC_O31]
gi|404293168|gb|EEH72249.2| lysyl-tRNA synthetase, heat inducible [Escherichia sp. 1_1_43]
gi|406779852|gb|AFS59276.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. 2009EL-2050]
gi|407056441|gb|AFS76492.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. 2011C-3493]
gi|407063170|gb|AFS84217.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. 2009EL-2071]
gi|408061807|gb|EKG96315.1| lysine--tRNA ligase [Escherichia coli FRIK920]
gi|408062813|gb|EKG97314.1| lysine--tRNA ligase [Escherichia coli PA34]
gi|408073135|gb|EKH07444.1| lysine--tRNA ligase [Escherichia coli PA7]
gi|408079697|gb|EKH13812.1| lysine--tRNA ligase [Escherichia coli FDA507]
gi|408087975|gb|EKH21377.1| lysine--tRNA ligase [Escherichia coli FDA504]
gi|408092742|gb|EKH25927.1| lysine--tRNA ligase [Escherichia coli FDA506]
gi|408093954|gb|EKH27002.1| lysine--tRNA ligase [Escherichia coli FRIK1999]
gi|408100458|gb|EKH32964.1| lysine--tRNA ligase [Escherichia coli FRIK1997]
gi|408105265|gb|EKH37465.1| lysine--tRNA ligase [Escherichia coli NE1487]
gi|408111969|gb|EKH43659.1| lysine--tRNA ligase [Escherichia coli NE037]
gi|408124514|gb|EKH55178.1| lysine--tRNA ligase [Escherichia coli PA4]
gi|408133584|gb|EKH63481.1| lysine--tRNA ligase [Escherichia coli FRIK2001]
gi|408134517|gb|EKH64348.1| lysine--tRNA ligase [Escherichia coli PA23]
gi|408135958|gb|EKH65717.1| lysine--tRNA ligase [Escherichia coli PA49]
gi|408143382|gb|EKH72690.1| lysine--tRNA ligase [Escherichia coli PA45]
gi|408151709|gb|EKH80196.1| lysine--tRNA ligase [Escherichia coli TT12B]
gi|408156799|gb|EKH84999.1| lysine--tRNA ligase [Escherichia coli MA6]
gi|408160964|gb|EKH88955.1| lysine--tRNA ligase [Escherichia coli 5905]
gi|408169851|gb|EKH97096.1| lysine--tRNA ligase [Escherichia coli CB7326]
gi|408176446|gb|EKI03298.1| lysine--tRNA ligase [Escherichia coli EC96038]
gi|408179651|gb|EKI06309.1| lysine--tRNA ligase [Escherichia coli 5412]
gi|408189061|gb|EKI14816.1| lysine--tRNA ligase [Escherichia coli TW15901]
gi|408196826|gb|EKI22102.1| lysine--tRNA ligase [Escherichia coli TW00353]
gi|408209076|gb|EKI33685.1| lysine--tRNA ligase [Escherichia coli PA38]
gi|408223054|gb|EKI46857.1| lysine--tRNA ligase [Escherichia coli EC1735]
gi|408234245|gb|EKI57270.1| lysine--tRNA ligase [Escherichia coli EC1736]
gi|408236489|gb|EKI59383.1| lysine--tRNA ligase [Escherichia coli EC1737]
gi|408242450|gb|EKI65036.1| lysine--tRNA ligase [Escherichia coli EC1846]
gi|408251160|gb|EKI72913.1| lysine--tRNA ligase [Escherichia coli EC1847]
gi|408255653|gb|EKI77088.1| lysine--tRNA ligase [Escherichia coli EC1848]
gi|408262229|gb|EKI83179.1| lysine--tRNA ligase [Escherichia coli EC1849]
gi|408270670|gb|EKI90851.1| lysine--tRNA ligase [Escherichia coli EC1850]
gi|408273566|gb|EKI93620.1| lysine--tRNA ligase [Escherichia coli EC1856]
gi|408281690|gb|EKJ01085.1| lysine--tRNA ligase [Escherichia coli EC1862]
gi|408287720|gb|EKJ06577.1| lysine--tRNA ligase [Escherichia coli EC1864]
gi|408292655|gb|EKJ11166.1| lysine--tRNA ligase [Escherichia coli EC1865]
gi|408302552|gb|EKJ20056.1| lysine--tRNA ligase [Escherichia coli EC1868]
gi|408303790|gb|EKJ21239.1| lysine--tRNA ligase [Escherichia coli EC1866]
gi|408315226|gb|EKJ31555.1| lysine--tRNA ligase [Escherichia coli EC1869]
gi|408320861|gb|EKJ36932.1| lysine--tRNA ligase [Escherichia coli EC1870]
gi|408322309|gb|EKJ38303.1| lysine--tRNA ligase [Escherichia coli NE098]
gi|408333583|gb|EKJ48532.1| lysine--tRNA ligase [Escherichia coli FRIK523]
gi|408341205|gb|EKJ55676.1| lysine--tRNA ligase [Escherichia coli 0.1304]
gi|408458719|gb|EKJ82505.1| lysyl-tRNA synthetase [Escherichia coli AD30]
gi|408543954|gb|EKK21427.1| lysine--tRNA ligase [Escherichia coli 5.2239]
gi|408544377|gb|EKK21834.1| lysine--tRNA ligase [Escherichia coli 3.4870]
gi|408545027|gb|EKK22468.1| lysine--tRNA ligase [Escherichia coli 6.0172]
gi|408562274|gb|EKK38440.1| lysine--tRNA ligase [Escherichia coli 8.0566]
gi|408562545|gb|EKK38706.1| lysine--tRNA ligase [Escherichia coli 8.0586]
gi|408563392|gb|EKK39527.1| lysine--tRNA ligase [Escherichia coli 8.0569]
gi|408575320|gb|EKK51004.1| lysine--tRNA ligase [Escherichia coli 10.0833]
gi|408577164|gb|EKK52740.1| lysine--tRNA ligase [Escherichia coli 8.2524]
gi|408587954|gb|EKK62578.1| lysine--tRNA ligase [Escherichia coli 10.0869]
gi|408592867|gb|EKK67223.1| lysine--tRNA ligase [Escherichia coli 88.0221]
gi|408598017|gb|EKK71982.1| lysine--tRNA ligase [Escherichia coli 8.0416]
gi|408607333|gb|EKK80737.1| lysine--tRNA ligase [Escherichia coli 10.0821]
gi|412965536|emb|CCK49469.1| lysine tRNA synthetase, inducible; heat shock protein [Escherichia
coli chi7122]
gi|412972117|emb|CCJ46788.1| lysine tRNA synthetase, inducible; heat shock protein [Escherichia
coli]
gi|421939660|gb|EKT97175.1| lysyl-tRNA ligase [Escherichia coli O26:H11 str. CFSAN001629]
gi|421948899|gb|EKU05899.1| lysyl-tRNA ligase [Escherichia coli O111:H11 str. CFSAN001630]
gi|427200683|gb|EKV71096.1| lysine--tRNA ligase [Escherichia coli 89.0511]
gi|427200857|gb|EKV71269.1| lysine--tRNA ligase [Escherichia coli 88.1042]
gi|427203836|gb|EKV74134.1| lysine--tRNA ligase [Escherichia coli 88.1467]
gi|427216967|gb|EKV86056.1| lysine--tRNA ligase [Escherichia coli 90.0091]
gi|427220842|gb|EKV89736.1| lysine--tRNA ligase [Escherichia coli 90.2281]
gi|427223548|gb|EKV92292.1| lysine--tRNA ligase [Escherichia coli 90.0039]
gi|427237214|gb|EKW04758.1| lysine--tRNA ligase [Escherichia coli 93.0056]
gi|427237355|gb|EKW04898.1| lysine--tRNA ligase [Escherichia coli 93.0055]
gi|427241763|gb|EKW09187.1| lysine--tRNA ligase [Escherichia coli 94.0618]
gi|427255068|gb|EKW21344.1| lysine--tRNA ligase [Escherichia coli 95.0183]
gi|427256497|gb|EKW22664.1| lysine--tRNA ligase [Escherichia coli 95.1288]
gi|427256947|gb|EKW23095.1| lysine--tRNA ligase [Escherichia coli 95.0943]
gi|427272641|gb|EKW37366.1| lysine--tRNA ligase [Escherichia coli 96.0428]
gi|427273961|gb|EKW38627.1| lysine--tRNA ligase [Escherichia coli 96.0427]
gi|427279979|gb|EKW44379.1| lysine--tRNA ligase [Escherichia coli 96.0939]
gi|427288221|gb|EKW51864.1| lysine--tRNA ligase [Escherichia coli 96.0932]
gi|427295493|gb|EKW58601.1| lysine--tRNA ligase [Escherichia coli 96.0107]
gi|427296805|gb|EKW59853.1| lysine--tRNA ligase [Escherichia coli 97.0003]
gi|427306847|gb|EKW69351.1| lysine--tRNA ligase [Escherichia coli 97.1742]
gi|427309620|gb|EKW71922.1| lysine--tRNA ligase [Escherichia coli 97.0007]
gi|427314633|gb|EKW76677.1| lysine--tRNA ligase [Escherichia coli 99.0672]
gi|427324337|gb|EKW85816.1| lysine--tRNA ligase [Escherichia coli 99.0678]
gi|427325553|gb|EKW86993.1| lysine--tRNA ligase [Escherichia coli 99.0713]
gi|429250325|gb|EKY34990.1| lysine--tRNA ligase [Escherichia coli 96.0109]
gi|429250465|gb|EKY35121.1| lysine--tRNA ligase [Escherichia coli 97.0010]
gi|429354208|gb|EKY90912.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. 11-02030]
gi|429355061|gb|EKY91755.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. 11-02033-1]
gi|429356053|gb|EKY92736.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. 11-02092]
gi|429369778|gb|EKZ06353.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. 11-02093]
gi|429370073|gb|EKZ06640.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. 11-02281]
gi|429371818|gb|EKZ08369.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. 11-02318]
gi|429385945|gb|EKZ22397.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. 11-02913]
gi|429387894|gb|EKZ24325.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. 11-03439]
gi|429388074|gb|EKZ24501.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. 11-03943]
gi|429399022|gb|EKZ35347.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. 11-04080]
gi|429401137|gb|EKZ37446.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. Ec11-9990]
gi|429403699|gb|EKZ39981.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. Ec11-9450]
gi|429412092|gb|EKZ48290.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. Ec11-4984]
gi|429414225|gb|EKZ50401.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. Ec11-4986]
gi|429422344|gb|EKZ58464.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. Ec11-4987]
gi|429425221|gb|EKZ61312.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. Ec11-4988]
gi|429430940|gb|EKZ66991.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. Ec11-5603]
gi|429437817|gb|EKZ73815.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. Ec11-5604]
gi|429441672|gb|EKZ77641.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. Ec12-0465]
gi|429447014|gb|EKZ82939.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. Ec11-6006]
gi|429453253|gb|EKZ89122.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. Ec12-0466]
gi|429458307|gb|EKZ94136.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli O104:H4
str. Ec11-9941]
gi|430890245|gb|ELC12882.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE10]
gi|430892841|gb|ELC15325.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE11]
gi|430895020|gb|ELC17296.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE12]
gi|430945968|gb|ELC66033.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE44]
gi|430976012|gb|ELC92888.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE193]
gi|431012700|gb|ELD26468.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE212]
gi|431065985|gb|ELD74734.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE234]
gi|431110430|gb|ELE14356.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE56]
gi|431166853|gb|ELE67157.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE77]
gi|431175135|gb|ELE75155.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE81]
gi|431204922|gb|ELF03436.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE111]
gi|431215260|gb|ELF12957.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE119]
gi|431226491|gb|ELF23655.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE156]
gi|431233113|gb|ELF28706.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE161]
gi|431288738|gb|ELF79496.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE42]
gi|431314702|gb|ELG02635.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE48]
gi|431358633|gb|ELG45284.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE101]
gi|431381325|gb|ELG65956.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE135]
gi|431389995|gb|ELG73704.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE136]
gi|431409900|gb|ELG93063.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE146]
gi|431415942|gb|ELG98434.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE154]
gi|431475256|gb|ELH55060.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE203]
gi|431476001|gb|ELH55797.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE197]
gi|431544774|gb|ELI19587.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE112]
gi|431560641|gb|ELI34151.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE120]
gi|431605882|gb|ELI75269.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE138]
gi|431641049|gb|ELJ08794.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE163]
gi|431685297|gb|ELJ50871.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE232]
gi|441605314|emb|CCP97913.1| Lysyl-tRNA synthetase (class II) [Escherichia coli O10:K5(L):H4
str. ATCC 23506]
gi|443420151|gb|AGC85055.1| lysyl-tRNA ligase [Escherichia coli APEC O78]
gi|444534462|gb|ELV14694.1| lysine--tRNA ligase [Escherichia coli 99.0814]
gi|444535600|gb|ELV15671.1| lysine--tRNA ligase [Escherichia coli 09BKT078844]
gi|444544773|gb|ELV23783.1| lysine--tRNA ligase [Escherichia coli 99.0815]
gi|444553516|gb|ELV31132.1| lysine--tRNA ligase [Escherichia coli 99.0816]
gi|444554008|gb|ELV31597.1| lysine--tRNA ligase [Escherichia coli 99.0839]
gi|444561943|gb|ELV39045.1| lysine--tRNA ligase [Escherichia coli 99.0848]
gi|444568031|gb|ELV44736.1| lysine--tRNA ligase [Escherichia coli 99.1753]
gi|444571328|gb|ELV47815.1| lysine--tRNA ligase [Escherichia coli 99.1775]
gi|444574811|gb|ELV51074.1| lysine--tRNA ligase [Escherichia coli 99.1793]
gi|444586986|gb|ELV62458.1| lysine--tRNA ligase [Escherichia coli 99.1805]
gi|444588342|gb|ELV63727.1| lysine--tRNA ligase [Escherichia coli ATCC 700728]
gi|444588815|gb|ELV64179.1| lysine--tRNA ligase [Escherichia coli PA11]
gi|444602440|gb|ELV77182.1| lysine--tRNA ligase [Escherichia coli PA19]
gi|444602559|gb|ELV77300.1| lysine--tRNA ligase [Escherichia coli PA13]
gi|444611614|gb|ELV85941.1| lysine--tRNA ligase [Escherichia coli PA2]
gi|444617997|gb|ELV92096.1| lysine--tRNA ligase [Escherichia coli PA47]
gi|444619466|gb|ELV93507.1| lysine--tRNA ligase [Escherichia coli PA48]
gi|444625725|gb|ELV99545.1| lysine--tRNA ligase [Escherichia coli PA8]
gi|444634341|gb|ELW07820.1| lysine--tRNA ligase [Escherichia coli 7.1982]
gi|444635794|gb|ELW09205.1| lysine--tRNA ligase [Escherichia coli 99.1781]
gi|444641046|gb|ELW14291.1| lysine--tRNA ligase [Escherichia coli 99.1762]
gi|444650571|gb|ELW23399.1| lysine--tRNA ligase [Escherichia coli PA35]
gi|444656591|gb|ELW29115.1| lysine--tRNA ligase [Escherichia coli 3.4880]
gi|444666260|gb|ELW38338.1| lysine--tRNA ligase [Escherichia coli 99.0670]
gi|449313204|gb|EMD03424.1| lysyl-tRNA ligase [Escherichia coli S17]
Length = 505
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/440 (52%), Positives = 316/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y D FK +D+GDIIGA+GTLF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDSLPEGVYNDQFKKWDLGDIIGARGTLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE++YR RY+DLI N+ +R+ F R++
Sbjct: 130 KTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSK 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+++IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAAIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + + +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
K+ Y + DF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 KVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF+ Q++ K + E + +YD DY+ ALEYG+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAERFQEQVNAKAAGDDE-AMFYDEDYVTALEYGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
IML TNS IRDVILFP +R
Sbjct: 483 IMLFTNSHTIRDVILFPAMR 502
>gi|110644488|ref|YP_672218.1| lysyl-tRNA synthetase [Escherichia coli 536]
gi|191173390|ref|ZP_03034919.1| lysyl-tRNA synthetase LysU [Escherichia coli F11]
gi|218692425|ref|YP_002400637.1| lysyl-tRNA synthetase [Escherichia coli ED1a]
gi|222158852|ref|YP_002558991.1| Lysyl-tRNA synthetase, heat inducible [Escherichia coli LF82]
gi|300995361|ref|ZP_07181057.1| lysyl-tRNA synthetase [Escherichia coli MS 200-1]
gi|306815736|ref|ZP_07449885.1| lysyl-tRNA synthetase [Escherichia coli NC101]
gi|331681066|ref|ZP_08381703.1| lysine--tRNA ligase [Escherichia coli H299]
gi|387619463|ref|YP_006122485.1| lysyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
gi|417287613|ref|ZP_12074899.1| lysine--tRNA ligase [Escherichia coli TW07793]
gi|422372839|ref|ZP_16453181.1| lysyl-tRNA synthetase [Escherichia coli MS 60-1]
gi|425303082|ref|ZP_18692954.1| lysine--tRNA ligase [Escherichia coli 07798]
gi|432384063|ref|ZP_19626982.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE15]
gi|432385079|ref|ZP_19627982.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE16]
gi|432443769|ref|ZP_19686090.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE189]
gi|432448843|ref|ZP_19691137.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE191]
gi|432473520|ref|ZP_19715552.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE206]
gi|432516554|ref|ZP_19753764.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE224]
gi|432614235|ref|ZP_19850382.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE72]
gi|432619445|ref|ZP_19855539.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE75]
gi|432648836|ref|ZP_19884616.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE86]
gi|432658405|ref|ZP_19894095.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE93]
gi|432701680|ref|ZP_19936819.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE169]
gi|432716026|ref|ZP_19951046.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE8]
gi|432748139|ref|ZP_19982796.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE43]
gi|432800078|ref|ZP_20034076.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE84]
gi|432908232|ref|ZP_20116368.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE194]
gi|432941199|ref|ZP_20138882.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE183]
gi|432988013|ref|ZP_20176718.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE215]
gi|433016503|ref|ZP_20204820.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE104]
gi|433026084|ref|ZP_20214043.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE106]
gi|433041185|ref|ZP_20228764.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE113]
gi|433080383|ref|ZP_20266891.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE131]
gi|433103771|ref|ZP_20289830.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE145]
gi|433146809|ref|ZP_20331929.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE168]
gi|433190978|ref|ZP_20375054.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE88]
gi|433200940|ref|ZP_20384812.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE94]
gi|433326899|ref|ZP_20403564.1| lysyl-tRNA ligase [Escherichia coli J96]
gi|110346080|gb|ABG72317.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli 536]
gi|190906366|gb|EDV65976.1| lysyl-tRNA synthetase LysU [Escherichia coli F11]
gi|218429989|emb|CAR10822.1| lysine tRNA synthetase, inducible [Escherichia coli ED1a]
gi|222035857|emb|CAP78602.1| Lysyl-tRNA synthetase, heat inducible [Escherichia coli LF82]
gi|300304862|gb|EFJ59382.1| lysyl-tRNA synthetase [Escherichia coli MS 200-1]
gi|305851398|gb|EFM51853.1| lysyl-tRNA synthetase [Escherichia coli NC101]
gi|312948724|gb|ADR29551.1| lysyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
gi|324015778|gb|EGB84997.1| lysyl-tRNA synthetase [Escherichia coli MS 60-1]
gi|331081287|gb|EGI52448.1| lysine--tRNA ligase [Escherichia coli H299]
gi|386248398|gb|EII94570.1| lysine--tRNA ligase [Escherichia coli TW07793]
gi|408209522|gb|EKI34111.1| lysine--tRNA ligase [Escherichia coli 07798]
gi|430902533|gb|ELC24396.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE15]
gi|430911201|gb|ELC32488.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE16]
gi|430960367|gb|ELC78523.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE189]
gi|430970528|gb|ELC87600.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE191]
gi|430994790|gb|ELD11108.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE206]
gi|431036738|gb|ELD47727.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE224]
gi|431145261|gb|ELE46918.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE72]
gi|431149892|gb|ELE50956.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE75]
gi|431176785|gb|ELE76726.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE86]
gi|431186751|gb|ELE86290.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE93]
gi|431239128|gb|ELF33779.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE169]
gi|431250173|gb|ELF44320.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE8]
gi|431288691|gb|ELF79450.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE43]
gi|431352934|gb|ELG39693.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE84]
gi|431425200|gb|ELH07273.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE194]
gi|431459048|gb|ELH39366.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE183]
gi|431491494|gb|ELH71099.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE215]
gi|431525412|gb|ELI02209.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE104]
gi|431529241|gb|ELI05944.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE106]
gi|431546997|gb|ELI21383.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE113]
gi|431591763|gb|ELI62673.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE131]
gi|431614288|gb|ELI83444.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE145]
gi|431656059|gb|ELJ23082.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE168]
gi|431700378|gb|ELJ65358.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE88]
gi|431715503|gb|ELJ79652.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE94]
gi|432345211|gb|ELL39730.1| lysyl-tRNA ligase [Escherichia coli J96]
Length = 505
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/440 (52%), Positives = 316/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y D FK +D+GDIIGA+GTLF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDSLPEGVYNDQFKKWDLGDIIGARGTLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE++YR RY+DLI N+ +R+ F R++
Sbjct: 130 KTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSK 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+++IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAAIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + + +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
K+ Y + DF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 KVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF+ Q++ K + E + +YD DY+ ALEYG+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAERFQEQVNAKAAGDDE-AMFYDEDYVTALEYGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
IML TNS IRDVILFP +R
Sbjct: 483 IMLFTNSHTIRDVILFPAMR 502
>gi|218702794|ref|YP_002410423.1| lysyl-tRNA synthetase [Escherichia coli IAI39]
gi|386627076|ref|YP_006146804.1| lysine tRNA synthetase, inducible [Escherichia coli O7:K1 str.
CE10]
gi|422829207|ref|ZP_16877375.1| lysyl-tRNA synthetase [Escherichia coli B093]
gi|218372780|emb|CAR20658.1| lysine tRNA synthetase, inducible [Escherichia coli IAI39]
gi|349740812|gb|AEQ15518.1| lysine tRNA synthetase, inducible [Escherichia coli O7:K1 str.
CE10]
gi|371610364|gb|EHN98893.1| lysyl-tRNA synthetase [Escherichia coli B093]
Length = 505
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/440 (52%), Positives = 316/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y D FK +D+GDIIGA+GTLF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDSLPEGVYNDQFKKWDLGDIIGARGTLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE++YR RY+DLI N+ +R+ F R++
Sbjct: 130 KTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSK 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+++IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAAIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + + +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
K+ Y + DF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 KVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF+ Q++ K + E + +YD DY+ ALEYG+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAERFQEQVNAKAAGDDE-AMFYDEDYVTALEYGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
IML TNS IRDVILFP +R
Sbjct: 483 IMLFTNSHTIRDVILFPAMR 502
>gi|365971975|ref|YP_004953536.1| lysyl-tRNA synthetase [Enterobacter cloacae EcWSU1]
gi|365750888|gb|AEW75115.1| Lysyl-tRNA synthetase [Enterobacter cloacae EcWSU1]
Length = 505
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 235/440 (53%), Positives = 316/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY+S + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVSRDDLPEGIYNEQFKKWDLGDILGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +RK FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRKTFKIRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM DFMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 IMAGIRQFMVNRDFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF+++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +GTT
Sbjct: 250 GGFDRVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
K+ Y + DF K FEKLT+ EAI KY P+ N DL N K+ + I + L
Sbjct: 310 KVPYGEEVFDFGKPFEKLTMCEAIMKYRPETNMADLDNFDSAKAIAESIGINVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF++Q++ K + E + ++D DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFQDQVNAKAAGDDE-AMFFDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|398794939|ref|ZP_10554900.1| lysyl-tRNA synthetase (class II) [Pantoea sp. YR343]
gi|398207638|gb|EJM94385.1| lysyl-tRNA synthetase (class II) [Pantoea sp. YR343]
Length = 506
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 236/440 (53%), Positives = 319/440 (72%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF LQD G+IQ+Y+S + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFATLQDV-----GGQIQIYVSRDDLPEGVYNEQFKKWDLGDILGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI ++ L+L+TK+LRPLP+KF L++QE +YR RY+DLI N+++RK FK R+Q
Sbjct: 130 KTKTGELSIHITELRLLTKALRPLPDKFHGLADQETRYRQRYLDLISNDDSRKTFKIRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM +FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 IMAGIRQFMVNREFMEVETPMMQVIPGGASARPFITHHNALDIDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF+++FEIN+NFRNEGISPRHNPEFTM+E Y AY +Y L++ TE + + + D +GTT
Sbjct: 250 GGFDRVFEINRNFRNEGISPRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y DF K FEKLT+ EAIKKY P+ + DL++ + K ++ K + L
Sbjct: 310 EVPYGDHSFDFGKPFEKLTMREAIKKYRPETDLSDLEDFDKAVAIAKALHIKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEET E L PT+IT YP E+SPLAR+ N EN IT+RFE FI G EI
Sbjct: 370 RVVTEI-----FEETAEAHLIQPTFITEYPAEVSPLARR-NDENPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF Q++ K + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAERFLQQVNAKESGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP LR
Sbjct: 483 VMLFTNSHTIRDVILFPALR 502
>gi|194437248|ref|ZP_03069346.1| lysyl-tRNA synthetase LysU [Escherichia coli 101-1]
gi|251787383|ref|YP_003001687.1| lysyl-tRNA synthetase, subunit of lysyl-tRNA synthetase / Ap[4]A
synthetase / Ap[3]A synthetase [Escherichia coli
BL21(DE3)]
gi|253775242|ref|YP_003038073.1| lysyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|254164062|ref|YP_003047170.1| lysyl-tRNA synthetase [Escherichia coli B str. REL606]
gi|254290812|ref|YP_003056560.1| lysine tRNA synthetase, inducible [Escherichia coli BL21(DE3)]
gi|422787987|ref|ZP_16840724.1| lysyl-tRNA synthetase [Escherichia coli H489]
gi|422793563|ref|ZP_16846258.1| lysyl-tRNA synthetase [Escherichia coli TA007]
gi|442598720|ref|ZP_21016469.1| Lysyl-tRNA synthetase (class II) [Escherichia coli O5:K4(L):H4 str.
ATCC 23502]
gi|194423804|gb|EDX39793.1| lysyl-tRNA synthetase LysU [Escherichia coli 101-1]
gi|242379656|emb|CAQ34479.1| lysyl-tRNA synthetase, subunit of lysyl-tRNA synthetase / Ap[4]A
synthetase / Ap[3]A synthetase [Escherichia coli
BL21(DE3)]
gi|253326286|gb|ACT30888.1| lysyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253975963|gb|ACT41634.1| lysine tRNA synthetase, inducible [Escherichia coli B str. REL606]
gi|253980119|gb|ACT45789.1| lysine tRNA synthetase, inducible [Escherichia coli BL21(DE3)]
gi|323960364|gb|EGB56002.1| lysyl-tRNA synthetase [Escherichia coli H489]
gi|323969887|gb|EGB65165.1| lysyl-tRNA synthetase [Escherichia coli TA007]
gi|441652478|emb|CCQ02020.1| Lysyl-tRNA synthetase (class II) [Escherichia coli O5:K4(L):H4 str.
ATCC 23502]
Length = 505
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/440 (52%), Positives = 316/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y D FK +D+GDIIGA+GTLF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDSLPEGVYNDQFKKWDLGDIIGARGTLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE++YR RY+DLI N+ +R+ F R++
Sbjct: 130 KTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSK 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+++IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAAIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + + +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
K+ Y + DF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 KVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF+ Q++ K + E + +YD DY+ ALEYG+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAERFQEQVNAKAAGDDE-AMFYDEDYVTALEYGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
IML TNS IRDVILFP +R
Sbjct: 483 IMLFTNSHTIRDVILFPAMR 502
>gi|170682016|ref|YP_001746526.1| lysyl-tRNA synthetase [Escherichia coli SMS-3-5]
gi|170519734|gb|ACB17912.1| lysyl-tRNA synthetase LysU [Escherichia coli SMS-3-5]
Length = 505
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/440 (52%), Positives = 316/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y D FK +D+GDIIGA+GTLF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDSLPEGVYNDQFKKWDLGDIIGARGTLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE++YR RY+DLI N+ +R+ F R++
Sbjct: 130 KTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSK 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+++IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAAIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + + +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
K+ Y + DF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 KVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF+ Q++ K + E + +YD DY+ ALEYG+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAERFQEQVNAKAAGDDE-AMFYDEDYVTALEYGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
IML TNS IRDVILFP +R
Sbjct: 483 IMLFTNSHTIRDVILFPAMR 502
>gi|157158511|ref|YP_001465628.1| lysyl-tRNA synthetase [Escherichia coli E24377A]
gi|170021873|ref|YP_001726827.1| lysyl-tRNA synthetase [Escherichia coli ATCC 8739]
gi|300924404|ref|ZP_07140378.1| lysyl-tRNA synthetase [Escherichia coli MS 182-1]
gi|301330484|ref|ZP_07223100.1| lysyl-tRNA synthetase [Escherichia coli MS 78-1]
gi|312974064|ref|ZP_07788235.1| lysyl-tRNA synthetase [Escherichia coli 1827-70]
gi|417149154|ref|ZP_11989245.1| lysine--tRNA ligase [Escherichia coli 1.2264]
gi|418039964|ref|ZP_12678217.1| lysyl-tRNA synthetase [Escherichia coli W26]
gi|419863122|ref|ZP_14385683.1| lysyl-tRNA synthetase [Escherichia coli O103:H25 str. CVM9340]
gi|422957965|ref|ZP_16970179.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli H494]
gi|425307970|ref|ZP_18697623.1| lysine--tRNA ligase [Escherichia coli N1]
gi|425425176|ref|ZP_18806314.1| lysine--tRNA ligase [Escherichia coli 0.1288]
gi|432479094|ref|ZP_19721061.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE210]
gi|432752582|ref|ZP_19987156.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE29]
gi|432944018|ref|ZP_20140663.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE196]
gi|433045676|ref|ZP_20233142.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE117]
gi|450229847|ref|ZP_21897910.1| lysyl-tRNA ligase [Escherichia coli O08]
gi|157080541|gb|ABV20249.1| lysyl-tRNA synthetase [Escherichia coli E24377A]
gi|169756801|gb|ACA79500.1| lysyl-tRNA synthetase [Escherichia coli ATCC 8739]
gi|300419399|gb|EFK02710.1| lysyl-tRNA synthetase [Escherichia coli MS 182-1]
gi|300843567|gb|EFK71327.1| lysyl-tRNA synthetase [Escherichia coli MS 78-1]
gi|310331598|gb|EFP98854.1| lysyl-tRNA synthetase [Escherichia coli 1827-70]
gi|371596873|gb|EHN85699.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli H494]
gi|383477261|gb|EID69187.1| lysyl-tRNA synthetase [Escherichia coli W26]
gi|386161375|gb|EIH23178.1| lysine--tRNA ligase [Escherichia coli 1.2264]
gi|388343623|gb|EIL09555.1| lysyl-tRNA synthetase [Escherichia coli O103:H25 str. CVM9340]
gi|408224031|gb|EKI47765.1| lysine--tRNA ligase [Escherichia coli N1]
gi|408340204|gb|EKJ54713.1| lysine--tRNA ligase [Escherichia coli 0.1288]
gi|431012054|gb|ELD26124.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE210]
gi|431292523|gb|ELF82911.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE29]
gi|431465611|gb|ELH45693.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE196]
gi|431550837|gb|ELI24825.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE117]
gi|449312790|gb|EMD03031.1| lysyl-tRNA ligase [Escherichia coli O08]
Length = 505
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/440 (52%), Positives = 316/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y D FK +D+GDIIGA+GTLF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDSLPEGVYNDQFKKWDLGDIIGARGTLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE++YR RY+DLI N+ +R+ F R++
Sbjct: 130 KTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSK 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+++IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAAIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + + +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
K+ Y + DF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 KVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF+ Q++ K + E + +YD DY+ ALEYG+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAERFQEQVNAKAAGDDE-AMFYDEDYVTALEYGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
IML TNS IRDVILFP +R
Sbjct: 483 IMLFTNSHTIRDVILFPAMR 502
>gi|329296880|ref|ZP_08254216.1| lysyl-tRNA synthetase [Plautia stali symbiont]
Length = 506
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 237/438 (54%), Positives = 317/438 (72%), Gaps = 13/438 (2%)
Query: 3 KRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLFKT 61
+R+MGK SF LQD G +IQ+Y+S + + + +Y + FK +D+GDI+GA+G LFKT
Sbjct: 77 RRIMGKASFATLQDVGG-----QIQIYVSRDDLPEGVYNEQFKKWDLGDILGARGKLFKT 131
Query: 62 NTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQII 121
TGELSI +S L+L+TK+LRPLP+KF L++QE +YR RY+DLI N+++RK FK R+QI+
Sbjct: 132 KTGELSIHISELRLLTKALRPLPDKFHGLADQETRYRQRYLDLISNDDSRKTFKIRSQIM 191
Query: 122 SSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGG 181
+ IR FM DFMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++GG
Sbjct: 192 AGIRQFMVNRDFMEVETPMMQVIPGGASARPFITHHNALDIDMYLRIAPELYLKRLVVGG 251
Query: 182 FNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKI 241
F+++FEIN+NFRNEGISPRHNPEFTM+E Y AY +Y L++ TE + + + D +GTT++
Sbjct: 252 FDRVFEINRNFRNEGISPRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGTTEV 311
Query: 242 DYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNNL 301
Y DF K FEKLT+ EAIKKY P+ + DL + + ++ K + L +
Sbjct: 312 PYGEHTFDFGKPFEKLTMREAIKKYRPETDLADLDDFDKAVAIANALHIKVEKSWGLGRV 371
Query: 302 KKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIAN 361
+I FEET E L PT+IT YP E+SPLAR+ N EN IT+RFE FI G EI N
Sbjct: 372 VTEI-----FEETAEAHLIQPTFITEYPAEVSPLARR-NDENPEITDRFEFFIGGREIGN 425
Query: 362 GFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLIM 421
GFSELND E+Q+ RF Q++ K+ + E + +YD DY+ ALE+G+PP +G GIG+DRL+M
Sbjct: 426 GFSELNDAEDQAERFLQQVNAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRLVM 484
Query: 422 LLTNSKNIRDVILFPHLR 439
L TNS IRDVILFP LR
Sbjct: 485 LFTNSHTIRDVILFPALR 502
>gi|218549238|ref|YP_002383029.1| lysyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
gi|422805217|ref|ZP_16853649.1| lysyl-tRNA synthetase [Escherichia fergusonii B253]
gi|424816636|ref|ZP_18241787.1| lysyl-tRNA synthetase [Escherichia fergusonii ECD227]
gi|218356779|emb|CAQ89407.1| lysine tRNA synthetase, inducible [Escherichia fergusonii ATCC
35469]
gi|324114245|gb|EGC08218.1| lysyl-tRNA synthetase [Escherichia fergusonii B253]
gi|325497656|gb|EGC95515.1| lysyl-tRNA synthetase [Escherichia fergusonii ECD227]
Length = 505
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/440 (52%), Positives = 316/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y D FK +D+GDIIGA+GTLF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDSLPEGVYNDQFKKWDLGDIIGARGTLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE++YR RY+DLI N+ +R+ F R++
Sbjct: 130 KTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSK 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+++IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAAIRKFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQDVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
K+ Y + DF K FEKLT+ EAIKKY P+ + DL + K+ + I + L
Sbjct: 310 KVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDDFDAAKALAESIGITVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF+ Q++ K + E + +YD DY+ ALEYG+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAERFQEQVNAKAAGDDE-AMFYDEDYVTALEYGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
IML TNS IRDVILFP +R
Sbjct: 483 IMLFTNSHTIRDVILFPAMR 502
>gi|1311301|pdb|1LYL|A Chain A, Lysyl-Trna Synthetase (Lysu) (E.C.6.1.1.6) Complexed With
Lysine
gi|1311303|pdb|1LYL|B Chain B, Lysyl-Trna Synthetase (Lysu) (E.C.6.1.1.6) Complexed With
Lysine
gi|1311305|pdb|1LYL|C Chain C, Lysyl-Trna Synthetase (Lysu) (E.C.6.1.1.6) Complexed With
Lysine
gi|9954996|pdb|1E1O|A Chain A, Lysyl-Trna Synthetase (Lysu) Hexagonal For, Complexed With
Lysine
gi|9954997|pdb|1E1T|A Chain A, Lysyl-Trna Synthetase (Lysu) Hexagonal Form Complexed With
The Lysyl_adenylate Intermediate
gi|9954998|pdb|1E22|A Chain A, Lysyl-Trna Synthetase (Lysu) Hexagonal Form Complexed With
Lysine And The Non-Hydrolysable Atp Analogue Amp-Pcp
gi|9954999|pdb|1E24|A Chain A, Lysyl-Trna Synthetase (Lysu) Hexagonal Form Complexed With
Lysine And Atp And Mn2+
Length = 504
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/440 (52%), Positives = 316/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y D FK +D+GDIIGA+GTLF
Sbjct: 74 MTRRIMGKASFVTLQDVGG-----RIQLYVARDSLPEGVYNDQFKKWDLGDIIGARGTLF 128
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE++YR RY+DLI N+ +R+ F R++
Sbjct: 129 KTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSK 188
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+++IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 189 ILAAIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 248
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + + +GTT
Sbjct: 249 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTT 308
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
K+ Y + DF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 309 KVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLG 368
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 369 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 422
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF+ Q++ K + E + +YD DY+ ALEYG+PP +G GIG+DR+
Sbjct: 423 GNGFSELNDAEDQAERFQEQVNAKAAGDDE-AMFYDEDYVTALEYGLPPTAGLGIGIDRM 481
Query: 420 IMLLTNSKNIRDVILFPHLR 439
IML TNS IRDVILFP +R
Sbjct: 482 IMLFTNSHTIRDVILFPAMR 501
>gi|193067810|ref|ZP_03048776.1| lysyl-tRNA synthetase LysU [Escherichia coli E110019]
gi|432677310|ref|ZP_19912747.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE142]
gi|192958785|gb|EDV89222.1| lysyl-tRNA synthetase LysU [Escherichia coli E110019]
gi|431209408|gb|ELF07517.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE142]
Length = 505
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/440 (52%), Positives = 316/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y D FK +D+GDIIGA+GTLF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDSLPEGVYNDQFKKWDLGDIIGARGTLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE++YR RY+DLI N+ +R+ F R++
Sbjct: 130 KTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSK 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+++IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAAIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + + +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
K+ Y + DF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 KVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF+ Q++ K + E + +YD DY+ ALEYG+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAERFQEQVNAKAAGDDE-AMFYDEDYVTALEYGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
IML TNS IRDVILFP +R
Sbjct: 483 IMLFTNSHTIRDVILFPAMR 502
>gi|419270188|ref|ZP_13812527.1| lysyl-tRNA synthetase [Escherichia coli DEC10C]
gi|378106105|gb|EHW67741.1| lysyl-tRNA synthetase [Escherichia coli DEC10C]
Length = 505
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/440 (52%), Positives = 316/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y D FK +D+GDIIGA+GTLF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDSLPEGVYNDQFKKWDLGDIIGARGTLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE++YR RY+DLI N+ +R+ F R++
Sbjct: 130 KTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSK 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+++IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAAIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + + +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
K+ Y + DF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 KVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF+ Q++ K + E + +YD DY+ ALEYG+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAERFQEQVNAKAAGDDE-AMFYDGDYVTALEYGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
IML TNS IRDVILFP +R
Sbjct: 483 IMLFTNSHTIRDVILFPAMR 502
>gi|386278740|ref|ZP_10056434.1| lysyl-tRNA synthetase, heat inducible [Escherichia sp. 4_1_40B]
gi|386124253|gb|EIG72836.1| lysyl-tRNA synthetase, heat inducible [Escherichia sp. 4_1_40B]
Length = 505
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/440 (52%), Positives = 316/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y D FK +D+GDIIGA+GTLF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDSLPEGVYNDQFKKWDLGDIIGARGTLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE++YR RY+DLI N+ +R+ F R++
Sbjct: 130 KTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSK 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+++IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAAIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + + +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
K+ Y + DF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 KVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FDEVAEVHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF+ Q++ K + E + +YD DY+ ALEYG+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAERFQEQVNAKAAGDDE-AMFYDEDYVTALEYGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
IML TNS IRDVILFP +R
Sbjct: 483 IMLFTNSHTIRDVILFPAMR 502
>gi|417156492|ref|ZP_11994116.1| lysine--tRNA ligase [Escherichia coli 96.0497]
gi|417583803|ref|ZP_12234597.1| lysyl-tRNA synthetase [Escherichia coli STEC_B2F1]
gi|345332034|gb|EGW64492.1| lysyl-tRNA synthetase [Escherichia coli STEC_B2F1]
gi|386165242|gb|EIH31762.1| lysine--tRNA ligase [Escherichia coli 96.0497]
Length = 505
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/440 (52%), Positives = 316/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y D FK +D+GDIIGA+GTLF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDSLPEGVYNDQFKKWDLGDIIGARGTLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE++YR RY+DLI N+ +R+ F R++
Sbjct: 130 KTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSK 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+++IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAAIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + + +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
K+ Y + DF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 KVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPKITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF+ Q++ K + E + +YD DY+ ALEYG+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAERFQEQVNAKAAGDDE-AMFYDEDYVTALEYGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
IML TNS IRDVILFP +R
Sbjct: 483 IMLFTNSHTIRDVILFPAMR 502
>gi|312965748|ref|ZP_07779977.1| lysyl-tRNA synthetase [Escherichia coli 2362-75]
gi|417758655|ref|ZP_12406710.1| lysyl-tRNA synthetase [Escherichia coli DEC2B]
gi|418999832|ref|ZP_13547402.1| lysyl-tRNA synthetase [Escherichia coli DEC1A]
gi|419010706|ref|ZP_13558107.1| lysyl-tRNA synthetase [Escherichia coli DEC1C]
gi|419011311|ref|ZP_13558681.1| lysyl-tRNA synthetase [Escherichia coli DEC1D]
gi|419021357|ref|ZP_13568647.1| lysyl-tRNA synthetase [Escherichia coli DEC1E]
gi|419026829|ref|ZP_13574035.1| lysyl-tRNA synthetase [Escherichia coli DEC2A]
gi|419031972|ref|ZP_13579104.1| lysyl-tRNA synthetase [Escherichia coli DEC2C]
gi|419042664|ref|ZP_13589672.1| lysyl-tRNA synthetase [Escherichia coli DEC2E]
gi|312289722|gb|EFR17613.1| lysyl-tRNA synthetase [Escherichia coli 2362-75]
gi|377838003|gb|EHU03129.1| lysyl-tRNA synthetase [Escherichia coli DEC1A]
gi|377838240|gb|EHU03364.1| lysyl-tRNA synthetase [Escherichia coli DEC1C]
gi|377854878|gb|EHU19754.1| lysyl-tRNA synthetase [Escherichia coli DEC1E]
gi|377856140|gb|EHU21001.1| lysyl-tRNA synthetase [Escherichia coli DEC2A]
gi|377864845|gb|EHU29637.1| lysyl-tRNA synthetase [Escherichia coli DEC1D]
gi|377869701|gb|EHU34412.1| lysyl-tRNA synthetase [Escherichia coli DEC2B]
gi|377871111|gb|EHU35779.1| lysyl-tRNA synthetase [Escherichia coli DEC2C]
gi|377884617|gb|EHU49126.1| lysyl-tRNA synthetase [Escherichia coli DEC2E]
Length = 505
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/440 (52%), Positives = 316/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y D FK +D+GDIIGA+GTLF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDSLPEGVYNDQFKKWDLGDIIGARGTLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE++YR RY+DLI N+ +R+ F R++
Sbjct: 130 KTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSK 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+++IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAAIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + + +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
K+ Y + DF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 KVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGIMVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF+ Q++ K + E + +YD DY+ ALEYG+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAERFQEQVNAKAAGDDE-AMFYDEDYVTALEYGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
IML TNS IRDVILFP +R
Sbjct: 483 IMLFTNSHTIRDVILFPAMR 502
>gi|270264899|ref|ZP_06193163.1| lysyl-tRNA synthetase [Serratia odorifera 4Rx13]
gi|421785286|ref|ZP_16221717.1| lysine--tRNA ligase [Serratia plymuthica A30]
gi|270041197|gb|EFA14297.1| lysyl-tRNA synthetase [Serratia odorifera 4Rx13]
gi|407752550|gb|EKF62702.1| lysine--tRNA ligase [Serratia plymuthica A30]
Length = 505
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 229/440 (52%), Positives = 317/440 (72%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLAEGVYNEQFKKWDLGDILGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L++QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR+FM + FMEVETP++ PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 VMAGIRNFMVERGFMEVETPMMQVIPGGASARPFVTHHNALDIDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEG+SPRHNPEFTM+E Y AY +Y L++ TE + + + D +G T
Sbjct: 250 GGFERVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYKDLIELTESLFRTLTQDVLGKT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y + DF K FEKLT+ EAIKKY P+ + DL + + + I K + L
Sbjct: 310 QVQYGDEVFDFGKPFEKLTMTEAIKKYRPETDLADLADMGKAVAIAESIGIKIEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E+ L PT+IT YP E+SPLAR+ N EN IT+RFE FI G EI
Sbjct: 370 RVVTEI-----FEEVAESHLIQPTFITEYPAEVSPLARR-NDENPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q++ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFADQVNAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|237703720|ref|ZP_04534201.1| lysyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
gi|26111378|gb|AAN83560.1|AE016771_71 Lysyl-tRNA synthetase, heat inducible [Escherichia coli CFT073]
gi|91075253|gb|ABE10134.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli UTI89]
gi|226901632|gb|EEH87891.1| lysyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
Length = 514
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/440 (52%), Positives = 316/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y D FK +D+GDIIGA+GTLF
Sbjct: 84 MTRRIMGKASFVTLQDVGG-----RIQLYVARDSLPEGVYNDQFKKWDLGDIIGARGTLF 138
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE++YR RY+DLI N+ +R+ F R++
Sbjct: 139 KTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSK 198
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+++IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 199 ILAAIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 258
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + + +GTT
Sbjct: 259 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTT 318
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
K+ Y + DF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 319 KVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLG 378
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 379 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 432
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF+ Q++ K + E + +YD DY+ ALEYG+PP +G GIG+DR+
Sbjct: 433 GNGFSELNDAEDQAERFQEQVNAKAAGDDE-AMFYDEDYVTALEYGLPPTAGLGIGIDRM 491
Query: 420 IMLLTNSKNIRDVILFPHLR 439
IML TNS IRDVILFP +R
Sbjct: 492 IMLFTNSHTIRDVILFPAMR 511
>gi|332280912|ref|ZP_08393325.1| lysyl-tRNA synthetase [Shigella sp. D9]
gi|332103264|gb|EGJ06610.1| lysyl-tRNA synthetase [Shigella sp. D9]
Length = 514
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 232/440 (52%), Positives = 316/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y D FK +D+GDIIGA+GTLF
Sbjct: 84 MTRRIMGKASFVTLQDVGG-----RIQLYVARDSLPEGVYNDQFKKWDLGDIIGARGTLF 138
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE++YR RY+DLI N+ +R+ F R++
Sbjct: 139 KTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSK 198
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+++IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 199 ILAAIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 258
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + + +GTT
Sbjct: 259 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTT 318
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
K+ Y + DF K FEKLT+ EAIKKY P+ + DL N K+ + + + L
Sbjct: 319 KVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESVGITVEKSWGLG 378
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 379 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 432
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF+ Q++ K + E + +YD DY+ ALEYG+PP +G GIG+DR+
Sbjct: 433 GNGFSELNDAEDQAERFQEQVNAKAAGDDE-AMFYDEDYVTALEYGLPPTAGLGIGIDRM 491
Query: 420 IMLLTNSKNIRDVILFPHLR 439
IML TNS IRDVILFP +R
Sbjct: 492 IMLFTNSHTIRDVILFPAMR 511
>gi|74314615|ref|YP_313034.1| lysyl-tRNA synthetase [Shigella sonnei Ss046]
gi|414579000|ref|ZP_11436158.1| lysyl-tRNA synthetase [Shigella sonnei 3233-85]
gi|420361549|ref|ZP_14862486.1| lysyl-tRNA synthetase [Shigella sonnei 3226-85]
gi|420366159|ref|ZP_14867011.1| lysyl-tRNA synthetase [Shigella sonnei 4822-66]
gi|73858092|gb|AAZ90799.1| lysine tRNA synthetase, inducible [Shigella sonnei Ss046]
gi|391276848|gb|EIQ35610.1| lysyl-tRNA synthetase [Shigella sonnei 3226-85]
gi|391280006|gb|EIQ38686.1| lysyl-tRNA synthetase [Shigella sonnei 3233-85]
gi|391291219|gb|EIQ49631.1| lysyl-tRNA synthetase [Shigella sonnei 4822-66]
Length = 505
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/440 (52%), Positives = 316/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y D FK +D+GDIIGA+GTLF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDSLPEGVYNDQFKKWDLGDIIGARGTLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE++YR RY+DLI N+ +R+ F R++
Sbjct: 130 KTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSK 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+++IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAAIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + + +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
K+ Y + DF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 KVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIITEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF+ Q++ K + E + +YD DY+ ALEYG+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAERFQEQVNAKAAGDDE-AMFYDEDYVTALEYGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
IML TNS IRDVILFP +R
Sbjct: 483 IMLFTNSHTIRDVILFPAMR 502
>gi|354725057|ref|ZP_09039272.1| lysyl-tRNA synthetase [Enterobacter mori LMG 25706]
Length = 505
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 235/440 (53%), Positives = 316/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY+S + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVSRDDLPEGIYNEQFKKWDLGDILGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +RK FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRKTFKIRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM DFMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 IMAGIRQFMVNRDFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF+++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +GTT
Sbjct: 250 GGFDRVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y + DF K F KLT+ EAIKKY P+ DL N K+ + I K + L
Sbjct: 310 EVPYGEEVFDFGKPFVKLTMREAIKKYRPETEMADLDNFDSAKAIAESIGIKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF++Q+D K + E + ++D DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFQDQVDAKAAGDDE-AMFFDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|331655961|ref|ZP_08356949.1| lysine--tRNA ligase [Escherichia coli M718]
gi|331046315|gb|EGI18405.1| lysine--tRNA ligase [Escherichia coli M718]
Length = 505
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/440 (52%), Positives = 316/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y D FK +D+GDIIGA+GTLF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDSLPEGVYNDQFKKWDLGDIIGARGTLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE++YR RY+DLI N+ +R+ F R++
Sbjct: 130 KTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVIRSK 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+++IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAAIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + + +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
K+ Y + DF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 KVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF+ Q++ K + E + +YD DY+ ALEYG+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAERFQEQVNAKAAGDDE-AMFYDEDYVTALEYGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
IML TNS IRDVILFP +R
Sbjct: 483 IMLFTNSHTIRDVILFPAMR 502
>gi|317049376|ref|YP_004117024.1| lysyl-tRNA synthetase [Pantoea sp. At-9b]
gi|316950993|gb|ADU70468.1| lysyl-tRNA synthetase [Pantoea sp. At-9b]
Length = 505
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 235/440 (53%), Positives = 316/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SFI LQD G +IQLY++ + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFITLQDVGG-----RIQLYVARDDLAEGVYNEQFKKWDLGDILGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI S L+L+TK+LRPLP+KF L++QE +YR RY+DLI N+ +R F+ R++
Sbjct: 130 KTKTGELSIHCSELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANDESRHTFQVRSK 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM DFMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 IMAGIRQFMVGRDFMEVETPMMQVIPGGASARPFITHHNALDIDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF+++FEIN+NFRNEGISPRHNPEFTM+E Y AY +Y L++ TE + + + D +GTT
Sbjct: 250 GGFDRVFEINRNFRNEGISPRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y DF K FEKLT+ EAIKKY P+ + DL + + ++ K + L
Sbjct: 310 EVPYGDNTFDFGKPFEKLTMREAIKKYRPETDLADLDDFDKAVAIANALHIKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEET E L PT+IT YP E+SPLAR+ N EN IT+RFE FI G EI
Sbjct: 370 RVVTEI-----FEETAEAHLIQPTFITEYPAEVSPLARR-NDENPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF Q++ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAERFLQQVNAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP LR
Sbjct: 483 VMLFTNSHTIRDVILFPALR 502
>gi|417230991|ref|ZP_12032407.1| lysine--tRNA ligase [Escherichia coli 5.0959]
gi|386205572|gb|EII10082.1| lysine--tRNA ligase [Escherichia coli 5.0959]
Length = 505
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/440 (52%), Positives = 315/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y D FK +D+GDIIGA+GTLF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDSLPEGVYNDQFKKWDLGDIIGARGTLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE++YR RY+DLI N+ +R+ F R++
Sbjct: 130 KTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSK 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+++IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAAIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + + +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
K+ Y + DF K FEKLT+ EAIKKY P+ + DL N K + I + L
Sbjct: 310 KVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDAAKELAESIGITVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF+ Q++ K + E + +YD DY+ ALEYG+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAERFQEQVNAKAAGDDE-AMFYDEDYVTALEYGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
IML TNS IRDVILFP +R
Sbjct: 483 IMLFTNSHTIRDVILFPAMR 502
>gi|448243751|ref|YP_007407804.1| lysyl-tRNA synthetase [Serratia marcescens WW4]
gi|445214115|gb|AGE19785.1| lysyl-tRNA synthetase [Serratia marcescens WW4]
gi|453065365|gb|EMF06327.1| lysyl-tRNA ligase [Serratia marcescens VGH107]
Length = 505
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 229/440 (52%), Positives = 319/440 (72%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLAEGVYNEQFKKWDLGDILGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L++QE +YR RY+DLI NE +R FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANEESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
++S+IR+FM + FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 VMSAIRNFMVERGFMEVETPMMQVIPGGASARPFITHHNALDIDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEG+SPRHNPEFTM+E Y AY +Y L++ TE + + + +GT+
Sbjct: 250 GGFERVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYKDLIELTETLFRTLTEKVLGTS 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y + DF K FEKLT+ EAIKKY P+ + DL + + + I K + L
Sbjct: 310 QVQYGDEVFDFGKPFEKLTMTEAIKKYRPETDLADLADMGKAVAIAESIGIKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E+ L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RVVTEI-----FEEVAESHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q++ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFADQVNAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|433137396|ref|ZP_20322713.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE166]
gi|431652529|gb|ELJ19679.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE166]
Length = 505
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/440 (52%), Positives = 315/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y D FK +D+GDIIGA+GTLF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDSLPEGVYNDQFKKWDLGDIIGARGTLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L QE++YR RY+DLI N+ +R+ F R++
Sbjct: 130 KTQTGELSIHCTELRLLTKALRPLPDKFHGLQAQEVRYRQRYLDLIANDKSRQTFVVRSK 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+++IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAAIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + + +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
K+ Y + DF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 KVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF+ Q++ K + E + +YD DY+ ALEYG+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAERFQEQVNAKAAGDDE-AMFYDEDYVTALEYGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
IML TNS IRDVILFP +R
Sbjct: 483 IMLFTNSHTIRDVILFPAMR 502
>gi|350552636|ref|ZP_08921833.1| Lysyl-tRNA synthetase [Thiorhodospira sibirica ATCC 700588]
gi|349793567|gb|EGZ47399.1| Lysyl-tRNA synthetase [Thiorhodospira sibirica ATCC 700588]
Length = 501
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 225/446 (50%), Positives = 321/446 (71%), Gaps = 20/446 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M KRVMGK SF L D SG +IQ++I + + + +Y FK++DIGDI+G +G LFK
Sbjct: 72 MAKRVMGKASFAQLLDMSG-----RIQVFIERDTLAEGVYAAFKSWDIGDIVGVQGVLFK 126
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS++V++L+L++KSLRPLP KF L + E +YR RY+DLI+NE+ R+ F+ RT++
Sbjct: 127 TKTGELSVRVATLRLLSKSLRPLPEKFHGLHDLETRYRQRYVDLIMNESVRETFRLRTRV 186
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I +R ++ F+EVETP++ PGGA A+PF+THHN+L+M ++LRIAPELYLKRL++G
Sbjct: 187 IQFLRDYLNAQHFLEVETPMMQPIPGGAAARPFMTHHNALDMPLYLRIAPELYLKRLVVG 246
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G +++EIN+NFRNEG+S RHNPEFTM+EFY AY +Y LM TE+M++ + ++ +G T
Sbjct: 247 GLERVYEINRNFRNEGLSTRHNPEFTMLEFYQAYADYADLMDLTEQMLQALSLEVLGRTA 306
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELK----KINPKFNQKK 296
YQG+ +D + F +++++EA+ Y P DL+++ + K ++ P++ +
Sbjct: 307 FSYQGQTIDLGQPFVRMSVLEAVCHYNPALQASDLEHRATAAAHAKALGIEVAPEWGVGR 366
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
I L LFE T E+KL PT+IT YPTE+SPLAR+S+ N +T+RFELFI G
Sbjct: 367 IW---------LELFETTVESKLLAPTFITGYPTEVSPLARRSD-HNPLLTDRFELFIGG 416
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
EIANGFSELNDPE+Q+ RF+ Q++ + + E + ++D DYI ALEY MPP +G GIG+
Sbjct: 417 REIANGFSELNDPEDQAERFQAQVNARQAGDAE-AMHFDADYIRALEYAMPPTAGEGIGI 475
Query: 417 DRLIMLLTNSKNIRDVILFPHLRNEN 442
DRL+MLLTN+ +IRDV+LFPHLR E
Sbjct: 476 DRLVMLLTNAPSIRDVLLFPHLRPET 501
>gi|432808373|ref|ZP_20042283.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE91]
gi|432931961|ref|ZP_20131902.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE184]
gi|433196191|ref|ZP_20380148.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE90]
gi|431351596|gb|ELG38382.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE91]
gi|431458545|gb|ELH38869.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE184]
gi|431712376|gb|ELJ76673.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE90]
Length = 505
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/440 (52%), Positives = 316/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y D FK +D+GDIIGA+GTLF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDSLPEGVYNDQFKKWDLGDIIGARGTLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE++YR RY+DLI N+ +R+ F R++
Sbjct: 130 KTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSK 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+++IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAAIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + + +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
K+ Y + DF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 KVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFESFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF+ Q++ K + E + +YD DY+ ALEYG+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAERFQEQVNAKAAGDDE-AMFYDEDYVTALEYGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
IML TNS IRDVILFP +R
Sbjct: 483 IMLFTNSHTIRDVILFPAMR 502
>gi|387130321|ref|YP_006293211.1| lysyl-tRNA synthetase [Methylophaga sp. JAM7]
gi|386271610|gb|AFJ02524.1| Lysyl-tRNA synthetase (class II) [Methylophaga sp. JAM7]
Length = 497
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/442 (52%), Positives = 320/442 (72%), Gaps = 14/442 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M KRVMGK SF L+D SG IQLY++ + + + +Y FK +D+GDIIGA+GTLF+
Sbjct: 69 MTKRVMGKASFANLRDMSG-----DIQLYVARDELAEGIYPQFKTWDMGDIIGAEGTLFR 123
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T GELS+ V +++L+TKSLRPLP KF LS+QE +YR RY+DLI+NE +R++F+ R+QI
Sbjct: 124 TKKGELSVHVDTIRLLTKSLRPLPEKFHGLSDQETRYRQRYVDLIMNEPSREIFRLRSQI 183
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I IR F+ D++EVETP++ PGGA A+PF THHN+L+M +FLRIAPELYLKRL++G
Sbjct: 184 IDGIRRFLIDKDYLEVETPMMQAIPGGATARPFTTHHNALDMDLFLRIAPELYLKRLVVG 243
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+S RHNPEFTM+EFY AY +YI LM TE M++ + +GTT+
Sbjct: 244 GFERVFEINRNFRNEGLSTRHNPEFTMVEFYQAYADYIELMDLTENMLRSVTQHALGTTQ 303
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQG +DF++ F ++T+ E+I + P L + + K + L
Sbjct: 304 VHYQGLDIDFAEPFSRMTVKESILHFNPALTAAQLDDLAAATAVAKALGIPIKDSYGLGK 363
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
+Q+ +FE+T E +L PT+IT YPTE+SPLAR+S+ + +T+RFE F+ G EIA
Sbjct: 364 -----VQIEIFEKTVEHQLMQPTFITAYPTEVSPLARRSD-GDPFVTDRFEFFVGGREIA 417
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSS-YYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RFK Q++ K+ G+L + +YD DYI ALEYGMPP +G GIG+DRL
Sbjct: 418 NGFSELNDAEDQAERFKKQVEDKDA--GDLEAMHYDADYIRALEYGMPPTAGEGIGIDRL 475
Query: 420 IMLLTNSKNIRDVILFPHLRNE 441
+MLLT+S +IRDV+LFPH+R E
Sbjct: 476 VMLLTDSPSIRDVLLFPHMRPE 497
>gi|432551757|ref|ZP_19788491.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE47]
gi|431087456|gb|ELD93377.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli KTE47]
Length = 505
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/440 (52%), Positives = 315/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y D FK +D+GDIIGA GTLF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDSLPEGVYNDQFKKWDLGDIIGAHGTLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE++YR RY+DLI N+ +R+ F R++
Sbjct: 130 KTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSK 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+++IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAAIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + + +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
K+ Y + DF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 KVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF+ Q++ K + E + +YD DY+ ALEYG+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAERFQEQVNAKAAGDDE-AMFYDEDYVTALEYGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
IML TNS IRDVILFP +R
Sbjct: 483 IMLFTNSHTIRDVILFPAMR 502
>gi|415813662|ref|ZP_11505392.1| lysyl-tRNA synthetase [Escherichia coli LT-68]
gi|417127799|ref|ZP_11975239.1| lysine--tRNA ligase [Escherichia coli 97.0246]
gi|323171560|gb|EFZ57206.1| lysyl-tRNA synthetase [Escherichia coli LT-68]
gi|386144265|gb|EIG90732.1| lysine--tRNA ligase [Escherichia coli 97.0246]
Length = 505
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/440 (52%), Positives = 315/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y D FK +D+GDIIGA+GTLF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDSLPEGVYNDQFKKWDLGDIIGARGTLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE++YR RY+DLI N+ +R+ F R++
Sbjct: 130 KTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSK 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+++IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAAIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + + +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
K+ Y + DF K FEKLT+ EAIKKY P+ + DL N K + I + L
Sbjct: 310 KVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDAAKELAESIGITVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF+ Q++ K + E + +YD DY+ ALEYG+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAERFQEQVNAKAAGDDE-AMFYDEDYVTALEYGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
IML TNS IRDVILFP +R
Sbjct: 483 IMLFTNSHTIRDVILFPAMR 502
>gi|206578828|ref|YP_002236653.1| lysyl-tRNA synthetase [Klebsiella pneumoniae 342]
gi|288933630|ref|YP_003437689.1| lysyl-tRNA synthetase [Klebsiella variicola At-22]
gi|290511304|ref|ZP_06550673.1| lysyl-tRNA synthetase [Klebsiella sp. 1_1_55]
gi|206567886|gb|ACI09662.1| lysyl-tRNA synthetase LysS [Klebsiella pneumoniae 342]
gi|288888359|gb|ADC56677.1| lysyl-tRNA synthetase [Klebsiella variicola At-22]
gi|289776297|gb|EFD84296.1| lysyl-tRNA synthetase [Klebsiella sp. 1_1_55]
Length = 505
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/440 (52%), Positives = 313/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y D FK +D+GDII A+G LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLAEGVYNDQFKKWDLGDIIAARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAGIRQFMVGRGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +G T
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGNT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y ++ DF K FEKLT+ EAIKKY P+ DL N K+ + I K + L
Sbjct: 310 EVPYGDQVFDFGKPFEKLTMREAIKKYRPETEMADLDNFDSAKAIAESIGIKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF++Q+D K + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFQDQVDAKAAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|188534902|ref|YP_001908699.1| lysyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
gi|238689741|sp|B2VF45.1|SYK_ERWT9 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|188029944|emb|CAO97828.1| Lysyl tRNA synthetase [Erwinia tasmaniensis Et1/99]
Length = 506
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 236/442 (53%), Positives = 319/442 (72%), Gaps = 17/442 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G+IQLY+S + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFVTLQDV-----GGRIQLYVSRDDLAEGIYNEQFKKWDLGDILGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI S L+L+TK+LRPLP+KF L++QE +YR RY+DLI N+++R FK R+Q
Sbjct: 130 KTKTGELSIHCSELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANDDSRNTFKIRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM DFMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 IMAGIRSFMVDRDFMEVETPMMQAIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF+++FEIN+NFRNEGISPRHNPEFTM+E Y AY +Y L++ TE + + + D +G+T
Sbjct: 250 GGFDRVFEINRNFRNEGISPRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGST 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSE--LKKINPKFNQKKI 297
+ Y + DF K FEKLT+ EAI KY PQ + DL + F KS + + K +
Sbjct: 310 VVPYGDQQFDFGKPFEKLTMKEAILKYRPQTDLADLAD--FDKSVAIAQSLGIKVEKSWG 367
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L L +I FEET E L PT+IT YP E+SPLAR++++ + IT+RFE FI G
Sbjct: 368 LGRLVTEI-----FEETAEAHLIQPTFITEYPAEVSPLARRNDM-DPEITDRFEFFIGGR 421
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND ++Q+ RF Q++ K+ + E + +YD DY+ ALE+G+PP +G GIG+D
Sbjct: 422 EIGNGFSELNDAQDQAERFLQQVNAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGID 480
Query: 418 RLIMLLTNSKNIRDVILFPHLR 439
R++ML TNS IRDVILFP LR
Sbjct: 481 RMVMLFTNSHTIRDVILFPALR 502
>gi|398800079|ref|ZP_10559355.1| lysyl-tRNA synthetase (class II) [Pantoea sp. GM01]
gi|398096283|gb|EJL86608.1| lysyl-tRNA synthetase (class II) [Pantoea sp. GM01]
Length = 506
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 236/440 (53%), Positives = 318/440 (72%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF LQD G +IQ+Y+S + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFATLQDVGG-----QIQIYVSRDDLPEGVYNEQFKKWDLGDILGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI +S L+L+TK+LRPLP+KF L++QE +YR RY+DLI N+ +R FK R++
Sbjct: 130 KTKTGELSIHISELRLLTKALRPLPDKFHGLADQETRYRQRYLDLISNDESRNTFKVRSK 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM DFMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 IMAGIRQFMVNRDFMEVETPMMQVIPGGASARPFITHHNALDIDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF+++FEIN+NFRNEGISPRHNPEFTM+E Y AY +Y L++ TE + + + D +GTT
Sbjct: 250 GGFDRVFEINRNFRNEGISPRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y DF K FEKLT+ EAIKKY P+ + DL++ + K ++ K + L
Sbjct: 310 EVPYGDHSFDFGKPFEKLTMREAIKKYRPETDLSDLEDFDKAVAIAKSLHIKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEET E L PT+IT YP E+SPLAR+ N EN IT+RFE FI G EI
Sbjct: 370 RVVTEI-----FEETAEAHLIQPTFITEYPAEVSPLARR-NDENPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF Q++ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAERFLQQVNAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP LR
Sbjct: 483 VMLFTNSHTIRDVILFPALR 502
>gi|322831510|ref|YP_004211537.1| lysyl-tRNA synthetase [Rahnella sp. Y9602]
gi|384256624|ref|YP_005400558.1| lysyl-tRNA synthetase [Rahnella aquatilis HX2]
gi|321166711|gb|ADW72410.1| lysyl-tRNA synthetase [Rahnella sp. Y9602]
gi|380752600|gb|AFE56991.1| lysyl-tRNA synthetase [Rahnella aquatilis HX2]
Length = 509
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 231/440 (52%), Positives = 315/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G+IQLY++ + + + +Y + FK +D+GDI+GA G LF
Sbjct: 77 MTRRIMGKASFVTLQDV-----GGRIQLYVARDDLAEGIYNEQFKKWDLGDILGATGKLF 131
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI S L+L+TK+LRPLP+KF L +QE +YR RY+DLI NE++RK FK R+Q
Sbjct: 132 KTKTGELSIHCSELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLIANEDSRKTFKIRSQ 191
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+S IR FM +N FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 192 IMSGIRSFMVENGFMEVETPMMQVIPGGAAARPFITHHNALDIDMYLRIAPELYLKRLVV 251
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF+++FEIN+NFRNEG+SPRHNPEFTM+E Y AY +Y L+ TE + + + +G++
Sbjct: 252 GGFDRVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYKDLIVLTETLFRTLTESVLGSS 311
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y + DF K F KLT+ EAI KY P+ N DL + + + + K + L
Sbjct: 312 VVQYGDQTFDFGKPFAKLTMREAICKYRPETNVADLDDLAKATAIAESLGIKIEKSWGLG 371
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEET E +L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 372 RIVTEI-----FEETAEAQLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 425
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q+ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 426 GNGFSELNDAEDQAQRFADQVSAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 484
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 485 VMLFTNSHTIRDVILFPAMR 504
>gi|417610915|ref|ZP_12261400.1| lysyl-tRNA synthetase [Escherichia coli STEC_DG131-3]
gi|345352567|gb|EGW84815.1| lysyl-tRNA synthetase [Escherichia coli STEC_DG131-3]
Length = 505
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/440 (52%), Positives = 315/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y D FK +D+GDIIGA+GTLF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDSLPEGVYNDQFKKWDLGDIIGARGTLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE++YR RY+DLI N+ +R+ F R++
Sbjct: 130 KTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSK 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+++IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAAIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + + +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
K+ Y + DF K FEKLT+ EAIKKY P+ + DL N K + I + L
Sbjct: 310 KVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDAAKELAESIGITVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF+ Q++ K + E + +YD DY+ ALEYG+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAERFQEQVNAKAAGDDE-AMFYDEDYVTALEYGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
IML TNS IRDVILFP +R
Sbjct: 483 IMLFTNSHTIRDVILFPAMR 502
>gi|420350323|ref|ZP_14851680.1| lysyl-tRNA synthetase [Shigella boydii 965-58]
gi|391263006|gb|EIQ22017.1| lysyl-tRNA synthetase [Shigella boydii 965-58]
Length = 432
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/440 (52%), Positives = 316/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G+IQLY++ + + + +Y D FK +D+GDIIGA+GTLF
Sbjct: 2 MTRRIMGKASFVTLQDV-----GGRIQLYVARDSLPEGVYNDQFKKWDLGDIIGARGTLF 56
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE++YR RY+DLI N+ +R+ F R++
Sbjct: 57 KTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSK 116
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+++IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 117 ILAAIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 176
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + + +GTT
Sbjct: 177 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTT 236
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
K+ Y + DF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 237 KVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLG 296
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 297 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 350
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF+ Q++ K + E + +YD DY+ ALEYG+PP +G GIG+DR+
Sbjct: 351 GNGFSELNDAEDQAERFQEQVNAKAAGDDE-AMFYDEDYVTALEYGLPPTAGLGIGIDRM 409
Query: 420 IMLLTNSKNIRDVILFPHLR 439
IML TNS IRDVILFP +R
Sbjct: 410 IMLFTNSHTIRDVILFPAMR 429
>gi|424093323|ref|ZP_17829222.1| lysine--tRNA ligase [Escherichia coli FRIK1996]
gi|390636421|gb|EIN16005.1| lysine--tRNA ligase [Escherichia coli FRIK1996]
Length = 505
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/440 (52%), Positives = 315/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y D FK +D+GDIIGA+GTLF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDSLPEGVYNDQFKKWDLGDIIGARGTLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE++YR RY+DLI N+ +R+ F R++
Sbjct: 130 KTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSK 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+++IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAAIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + + +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
K+ Y + DF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 KVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q RF+ Q++ K + E + +YD DY+ ALEYG+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQVERFQEQVNAKAAGDDE-AMFYDEDYVTALEYGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
IML TNS IRDVILFP +R
Sbjct: 483 IMLFTNSHTIRDVILFPAMR 502
>gi|419803743|ref|ZP_14328911.1| lysyl-tRNA synthetase [Escherichia coli AI27]
gi|384473310|gb|EIE57353.1| lysyl-tRNA synthetase [Escherichia coli AI27]
Length = 505
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/440 (52%), Positives = 315/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y D FK +D+GDIIGA+GTLF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDSLPEGVYNDQFKKWDLGDIIGARGTLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R+ F R++
Sbjct: 130 KTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLIANDKSRQTFVVRSK 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+++IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAAIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + + +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
K+ Y + DF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 KVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF+ Q++ K + E + +YD DY+ ALEYG+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAERFQEQVNAKAAGDDE-AMFYDEDYVTALEYGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
IML TNS IRDVILFP +R
Sbjct: 483 IMLFTNSHTIRDVILFPAMR 502
>gi|291618680|ref|YP_003521422.1| LysS [Pantoea ananatis LMG 20103]
gi|378765873|ref|YP_005194334.1| lysyl-tRNA synthetase [Pantoea ananatis LMG 5342]
gi|386016981|ref|YP_005935278.1| lysyl-tRNA synthetase LysS [Pantoea ananatis AJ13355]
gi|291153710|gb|ADD78294.1| LysS [Pantoea ananatis LMG 20103]
gi|327395060|dbj|BAK12482.1| lysyl-tRNA synthetase LysS [Pantoea ananatis AJ13355]
gi|365185347|emb|CCF08297.1| Lysyl-tRNA synthetase [Pantoea ananatis LMG 5342]
Length = 506
Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust.
Identities = 236/440 (53%), Positives = 316/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SFI LQD G +IQLY++ + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFITLQDVGG-----RIQLYVARDDLAEGIYNEQFKKWDLGDILGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI S L+L+TK+LRPLP+KF L++QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCSELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANDESRNTFKIRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM DFMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 IMAGIRQFMVGRDFMEVETPMMQVIPGGASARPFITHHNALDIDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF+++FEIN+NFRNEGISPRHNPEFTM+E Y AY +Y L++ TE + + + D +G+T
Sbjct: 250 GGFDRVFEINRNFRNEGISPRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGST 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y + DF K FEKLT+ EAIKKY P+ + DL + + + I K + L
Sbjct: 310 VVPYGEQEFDFGKPFEKLTMREAIKKYRPETDLADLDDFDKAVAIAQTIGIKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEET E L PT+IT YP E+SPLAR+ N EN IT+RFE FI G EI
Sbjct: 370 RVVTEI-----FEETAEAHLIQPTFITEYPAEVSPLARR-NDENPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND ++Q+ RF Q++ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAQDQAERFLQQVNAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP LR
Sbjct: 483 VMLFTNSHTIRDVILFPALR 502
>gi|374622472|ref|ZP_09694996.1| lysyl-tRNA synthetase [Ectothiorhodospira sp. PHS-1]
gi|373941597|gb|EHQ52142.1| lysyl-tRNA synthetase [Ectothiorhodospira sp. PHS-1]
Length = 498
Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust.
Identities = 225/441 (51%), Positives = 320/441 (72%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M KRVMGK SF +QD SG +IQL++ + + + +Y DFK++D+GDI+GA+GTLFK
Sbjct: 68 MAKRVMGKASFAQVQDMSG-----RIQLFVQRDALPEGVYQDFKSWDLGDILGAEGTLFK 122
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS++V SL+L+TKSLRPLP KF LS+ E +YR RY+DLI+NE R+ F+ RT+I
Sbjct: 123 TKTGELSVQVDSLRLLTKSLRPLPEKFHGLSDMETRYRQRYVDLIMNEPVRETFRVRTRI 182
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I +IR ++ + F+EVETP++ PGGA A+PF THHN+L+M++FLRIAPELYLKRL++G
Sbjct: 183 IQAIRDYLNRRGFLEVETPMMQAIPGGATARPFATHHNALDMQLFLRIAPELYLKRLVVG 242
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF K++EIN+NFRNEG+S RHNPEFTM+EFY AY Y LM TE +++ + D +GTT
Sbjct: 243 GFEKVYEINRNFRNEGLSTRHNPEFTMLEFYEAYVTYHELMDLTEDLLRTLARDVLGTTL 302
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
++YQG DF + F ++T+ +AI + P + DL ++ + +++ L
Sbjct: 303 VNYQGDTYDFGQPFARMTVKDAILHFNPALSAADLDDEARAREVARQLGIPLKDSYGLGK 362
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
+ +I FE+T E +L +PT+IT YPTE+SPLAR+ N ++ +T+RFE F+ G EIA
Sbjct: 363 VWIEI-----FEKTVEPRLKDPTFITAYPTEVSPLARR-NDDDPFVTDRFEFFVGGREIA 416
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RF+ Q+ + E + + ++D DY+ ALE+G+PP +G GIG+DRL+
Sbjct: 417 NGFSELNDYEDQAERFRRQV-AEKEAGDDEAMHFDADYLRALEHGLPPTAGEGIGIDRLV 475
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
ML T+S +IRDV+LFPH+R E
Sbjct: 476 MLFTDSPSIRDVLLFPHMRPE 496
>gi|419913074|ref|ZP_14431519.1| lysyl-tRNA synthetase [Escherichia coli KD1]
gi|388390330|gb|EIL51822.1| lysyl-tRNA synthetase [Escherichia coli KD1]
Length = 505
Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/440 (52%), Positives = 315/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + +Y D FK +D+GDIIGA+GTLF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARNSLPEGVYNDQFKKWDLGDIIGARGTLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE++YR RY+DLI N+ +R+ F R++
Sbjct: 130 KTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSK 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+++IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAAIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + + +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
K+ Y + DF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 KVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF+ Q++ K + E + +YD DY+ ALEYG+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAERFQEQVNAKAAGDDE-AMFYDEDYVTALEYGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
IML TNS IRDVILFP +R
Sbjct: 483 IMLFTNSHTIRDVILFPAMR 502
>gi|30961858|gb|AAP40013.1| lysine tRNA synthetase [Citrobacter freundii]
Length = 505
Score = 489 bits (1260), Expect = e-136, Method: Compositional matrix adjust.
Identities = 235/440 (53%), Positives = 316/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDILGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 IMAGIRQFMVGRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + + +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQNVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y + DF K FEKLT+ EAI+KY P+ N DL N K+ + I K + L
Sbjct: 310 EVPYGEEVFDFGKPFEKLTMREAIQKYRPETNMADLDNFDSAKAIAESIGIKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YPTE+SPLAR+ N EN IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPTEVSPLARR-NDENPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF++Q++ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFQDQVNAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|440286289|ref|YP_007339054.1| lysyl-tRNA synthetase (class II) [Enterobacteriaceae bacterium
strain FGI 57]
gi|440045811|gb|AGB76869.1| lysyl-tRNA synthetase (class II) [Enterobacteriaceae bacterium
strain FGI 57]
Length = 505
Score = 489 bits (1260), Expect = e-136, Method: Compositional matrix adjust.
Identities = 234/440 (53%), Positives = 315/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDILGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R++
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKIRSK 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM DFMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAGIRQFMVGRDFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
K+ Y DF K FEKLT+ EAIKKY P+ + DL N K+ + I K + L
Sbjct: 310 KVPYGEETFDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGIKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF++Q+D K + E + ++D DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFQDQVDAKAAGDDE-AMFFDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|146328872|ref|YP_001209830.1| lysyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
gi|229559857|sp|A5EY50.1|SYK_DICNV RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|146232342|gb|ABQ13320.1| lysyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
Length = 498
Score = 489 bits (1260), Expect = e-136, Method: Compositional matrix adjust.
Identities = 237/441 (53%), Positives = 324/441 (73%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M KRVMGK SF+ +QD SG +IQLY+S++ + + +Y +FK +D+GDII A G+LF+
Sbjct: 70 MGKRVMGKASFVHVQDGSGE----QIQLYVSSDALTEEVYEEFKTWDVGDIIFASGSLFR 125
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGEL+++ ++++L+TKSLRPLP+KF L++QEI+YR RY+DL++N +R VFK R++I
Sbjct: 126 TKTGELTVQTNAIRLLTKSLRPLPDKFHGLTDQEIRYRQRYVDLMVNAQSRDVFKARSKI 185
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
IS IRHF E DF+EVETP++H PGGA AKPFITHHN+L+M ++LRIAPELYLKRL++G
Sbjct: 186 ISYIRHFFEARDFLEVETPMMHPIPGGAAAKPFITHHNALDMPLYLRIAPELYLKRLVVG 245
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y LM +E + + + +GTTK
Sbjct: 246 GFERVFEINRNFRNEGVSARHNPEFTMLEFYQAYADYNDLMDLSEVLFQGLAQTILGTTK 305
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
DYQG +DFS+ F +L + +A+ +Y P+ I L++ + LK+ KF+ N
Sbjct: 306 FDYQGTEIDFSQ-FRRLPMRDAVCQYVPEAANI-LEDAPKMVQLLKE---KFH-IDAGNE 359
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
L M+FEE E L PT++ YP +SPL+R+ N EN +IT+RFELFI G EIA
Sbjct: 360 SDCGKLMTMIFEEGVEHLLIQPTFVIEYPAVVSPLSRR-NDENPDITDRFELFIGGREIA 418
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RFK Q E E + +YD D++ ALEYG+PP +G GIG+DRL+
Sbjct: 419 NGFSELNDAEDQAERFKEQA-AAFEAGDEEAMHYDGDFVRALEYGLPPTAGQGIGIDRLV 477
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLTN+ +IRDV+LFPH+R E
Sbjct: 478 MLLTNAPSIRDVLLFPHMRPE 498
>gi|215489478|ref|YP_002331909.1| lysyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
gi|215267550|emb|CAS12004.1| lysine tRNA synthetase, inducible [Escherichia coli O127:H6 str.
E2348/69]
Length = 505
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 232/440 (52%), Positives = 315/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y D FK +D+GDIIGA+GTLF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDSLPEGVYNDQFKKWDLGDIIGARGTLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TG LSI + L+L+TK+LRPLP+KF L +QE++YR RY+DLI N+ +R+ F R++
Sbjct: 130 KTQTGALSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSK 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+++IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAAIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + + +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
K+ Y + DF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 KVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGIMVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF+ Q++ K + E + +YD DY+ ALEYG+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAERFQEQVNAKAAGDDE-AMFYDEDYVTALEYGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
IML TNS IRDVILFP +R
Sbjct: 483 IMLFTNSHTIRDVILFPAMR 502
>gi|386078134|ref|YP_005991659.1| lysyl-tRNA synthetase LysS [Pantoea ananatis PA13]
gi|354987315|gb|AER31439.1| lysyl-tRNA synthetase LysS [Pantoea ananatis PA13]
Length = 506
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 236/440 (53%), Positives = 315/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SFI LQD G +IQLY++ + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFITLQDVGG-----RIQLYVARDDLAEGIYNEQFKKWDLGDILGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI S L+L+TK+LRPLP+KF L++QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCSELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANDESRNTFKIRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM DFMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 IMAGIRQFMVGRDFMEVETPMMQVIPGGASARPFITHHNALDIDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF+++FEIN+NFRNEGISPRHNPEFTM+E Y AY +Y L++ TE + + + D +G T
Sbjct: 250 GGFDRVFEINRNFRNEGISPRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGCT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y + DF K FEKLT+ EAIKKY P+ + DL + + + I K + L
Sbjct: 310 VVPYGEQEFDFGKPFEKLTMREAIKKYRPETDLADLDDFDKAVAIAQTIGIKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEET E L PT+IT YP E+SPLAR+ N EN IT+RFE FI G EI
Sbjct: 370 RVVTEI-----FEETAEAHLIQPTFITEYPAEVSPLARR-NDENPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND ++Q+ RF Q++ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAQDQAERFLQQVNAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP LR
Sbjct: 483 VMLFTNSHTIRDVILFPALR 502
>gi|336247063|ref|YP_004590773.1| lysyl-tRNA synthetase [Enterobacter aerogenes KCTC 2190]
gi|444354826|ref|YP_007390970.1| Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) [Enterobacter
aerogenes EA1509E]
gi|334733119|gb|AEG95494.1| lysyl-tRNA synthetase [Enterobacter aerogenes KCTC 2190]
gi|443905656|emb|CCG33430.1| Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) [Enterobacter
aerogenes EA1509E]
Length = 505
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 233/440 (52%), Positives = 311/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y D FK +D+GDII A+G LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLAEGVYNDQFKKWDLGDIIAARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAGIRQFMVGRGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +G T
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGNT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y + DF K FEKLT+ EAIKKY P+ DL N K+ + I K + L
Sbjct: 310 AVPYGDQTFDFGKPFEKLTMREAIKKYRPETEMADLDNFDSAKAIAESIGIKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF++Q+D K + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFQDQVDAKAAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|429087755|ref|ZP_19150487.1| Lysyl-tRNA synthetase (class II) [Cronobacter universalis NCTC
9529]
gi|426507558|emb|CCK15599.1| Lysyl-tRNA synthetase (class II) [Cronobacter universalis NCTC
9529]
Length = 505
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 232/440 (52%), Positives = 313/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDILGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +RK FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLIANDESRKTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM FMEVETP++ PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAGIRQFMVGRGFMEVETPMMQVIPGGASARPFVTHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y DF K FEKLT+ EAIKKY P+ + DL + K + + K + L
Sbjct: 310 QVPYGEETFDFGKPFEKLTMREAIKKYRPETDLADLDDFEKAKGVAQAVGIKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR+ N EN IT+RFE FI G EI
Sbjct: 370 RVVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARR-NDENPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF++Q+ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFQDQVAAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|390949692|ref|YP_006413451.1| lysyl-tRNA synthetase [Thiocystis violascens DSM 198]
gi|390426261|gb|AFL73326.1| lysyl-tRNA synthetase (class II) [Thiocystis violascens DSM 198]
Length = 512
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 228/447 (51%), Positives = 326/447 (72%), Gaps = 23/447 (5%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFK-NYDIGDIIGAKGTLF 59
M +RVMGK SF LQD SG +IQ+++ ++IG++ Y FK + D+GDI+GA+G LF
Sbjct: 80 MTRRVMGKASFAHLQDLSG-----RIQIFVQRDLIGEDAYASFKRDLDLGDILGAEGVLF 134
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI+ SL+L+TK+LRPLP KF L++ E +YR RY+DLI+N TR+ F+ RT
Sbjct: 135 KTKTGELSIRCDSLRLLTKALRPLPEKFHGLTDMESRYRQRYLDLIMNSGTRETFRIRTA 194
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+ IR ++ + ++EVETP++ PGGA+A+PF+THHN+L+M++FLRIAPEL+LKRL++
Sbjct: 195 IVQFIREYLNRRGYLEVETPMMQVIPGGAVARPFVTHHNALDMQLFLRIAPELFLKRLVV 254
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GG K++EIN+NFRNEG+S RHNPEFTM+EFY AY +Y LM TE M++++ + +G T
Sbjct: 255 GGLEKVYEINRNFRNEGLSTRHNPEFTMLEFYEAYADYRDLMDLTEDMLRQMALQVLGRT 314
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEID---LQNKLFLKSELK-KINPKFNQK 295
+I+YQG +F + F ++++ EAI ++ P+ D L+N + + LK + P +
Sbjct: 315 RIEYQGESYEFGQPFARMSVREAILRFNPELEPADVDVLENARAVAARLKIALKPTWGLG 374
Query: 296 KILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFII 355
KI Q+ LFE T E++L +PT+IT YPTE+SPLAR+ N +N +T+RFE F+
Sbjct: 375 KI---------QIELFERTVESRLLDPTFITQYPTEVSPLARR-NDDNPFVTDRFEFFVG 424
Query: 356 GNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSS-YYDTDYIHALEYGMPPASGCGI 414
G EIANGFSELND E+Q+ RF+ Q+ K+ G+L + ++D DYI ALE+GMPP +G GI
Sbjct: 425 GREIANGFSELNDAEDQAERFRAQVAEKD--AGDLEAMFFDADYIRALEHGMPPTAGEGI 482
Query: 415 GVDRLIMLLTNSKNIRDVILFPHLRNE 441
G+DRL+ML T+S +IRDV+LFPH+R E
Sbjct: 483 GIDRLVMLFTDSPSIRDVLLFPHMRPE 509
>gi|365101366|ref|ZP_09331996.1| lysyl-tRNA synthetase [Citrobacter freundii 4_7_47CFAA]
gi|395228526|ref|ZP_10406849.1| lysyl-tRNA synthetase [Citrobacter sp. A1]
gi|421845323|ref|ZP_16278478.1| lysyl-tRNA ligase [Citrobacter freundii ATCC 8090 = MTCC 1658]
gi|424731853|ref|ZP_18160434.1| lysyl-trna synthetase [Citrobacter sp. L17]
gi|363646916|gb|EHL86145.1| lysyl-tRNA synthetase [Citrobacter freundii 4_7_47CFAA]
gi|394718175|gb|EJF23819.1| lysyl-tRNA synthetase [Citrobacter sp. A1]
gi|411773644|gb|EKS57189.1| lysyl-tRNA ligase [Citrobacter freundii ATCC 8090 = MTCC 1658]
gi|422893481|gb|EKU33328.1| lysyl-trna synthetase [Citrobacter sp. L17]
gi|455642860|gb|EMF22011.1| lysyl-tRNA ligase [Citrobacter freundii GTC 09479]
Length = 505
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 234/440 (53%), Positives = 315/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDILGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 IMAGIRQFMVARGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + + +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQNVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y + DF K FEKLT+ EAI+KY P+ N DL N K+ + I K + L
Sbjct: 310 EVPYGEEVFDFGKPFEKLTMREAIQKYRPETNMADLDNFDSAKAIAESIGIKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR+ N EN IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARR-NDENPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF++Q++ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFQDQVNAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|419072435|ref|ZP_13618028.1| lysyl-tRNA synthetase [Escherichia coli DEC3E]
gi|377905936|gb|EHU70195.1| lysyl-tRNA synthetase [Escherichia coli DEC3E]
Length = 505
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 232/440 (52%), Positives = 315/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y D FK +D+GDIIGA+GTLF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDSLPEGVYNDQFKKWDLGDIIGARGTLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE++YR RY+DLI N+ +R+ F R++
Sbjct: 130 KTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSK 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+++IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAAIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + + +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
K+ Y + DF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 KVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF+ Q++ K + E + +Y DY+ ALEYG+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAERFQEQVNAKAAGDDE-AMFYGEDYVTALEYGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
IML TNS IRDVILFP +R
Sbjct: 483 IMLFTNSHTIRDVILFPAMR 502
>gi|429106051|ref|ZP_19167920.1| Lysyl-tRNA synthetase (class II) [Cronobacter malonaticus 681]
gi|426292774|emb|CCJ94033.1| Lysyl-tRNA synthetase (class II) [Cronobacter malonaticus 681]
Length = 505
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 232/440 (52%), Positives = 313/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDILGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +RK FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLIANDESRKTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM FMEVETP++ PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAGIRQFMVGRGFMEVETPMMQVIPGGASARPFVTHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y DF K FEKLT+ EAIKKY P+ + DL + K + + K + L
Sbjct: 310 QVPYGEETFDFGKPFEKLTMREAIKKYRPETDMADLDDFEKAKGIAQAVGIKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR+ N EN IT+RFE FI G EI
Sbjct: 370 RVVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARR-NDENPAITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF++Q+ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFQDQVAAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|385787270|ref|YP_005818379.1| lysyl-tRNA synthetase [Erwinia sp. Ejp617]
gi|310766542|gb|ADP11492.1| lysyl-tRNA synthetase [Erwinia sp. Ejp617]
Length = 506
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 235/442 (53%), Positives = 319/442 (72%), Gaps = 17/442 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G+IQLY+S + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFVTLQDV-----GGRIQLYVSRDDLADGIYNEQFKKWDLGDILGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI S L+L+TK+LRPLP+KF L++QE +YR RY+DLI N+++RK FK R+Q
Sbjct: 130 KTKTGELSIHCSELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANDDSRKTFKIRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR+FM DFMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 IMAGIRNFMVGRDFMEVETPMMQAIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF+++FEIN+NFRNEGISPRHNPEFTM+E Y AY +Y L++ TE + + + D +G+T
Sbjct: 250 GGFDRVFEINRNFRNEGISPRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGST 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKI-- 297
+ Y + DF K F +LT+ EAI KY PQ + DL + F KS + N +K
Sbjct: 310 VVPYGDQQFDFGKPFAQLTMKEAILKYRPQTDLADLAD--FEKSVAIAQSLGINVEKSWG 367
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L L +I FEET E L PT+IT YP E+SPLAR++++ + IT+RFE FI G
Sbjct: 368 LGRLVTEI-----FEETAEAHLIQPTFITEYPAEVSPLARRNDV-DPEITDRFEFFIGGR 421
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND ++Q+ RF Q++ K+ + E + +YD DY+ ALE+G+PP +G G+G+D
Sbjct: 422 EIGNGFSELNDAQDQAERFLQQVNAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGVGID 480
Query: 418 RLIMLLTNSKNIRDVILFPHLR 439
R++ML TNS IRDVILFP LR
Sbjct: 481 RMVMLFTNSHTIRDVILFPALR 502
>gi|429111489|ref|ZP_19173259.1| Lysyl-tRNA synthetase (class II) [Cronobacter malonaticus 507]
gi|426312646|emb|CCJ99372.1| Lysyl-tRNA synthetase (class II) [Cronobacter malonaticus 507]
Length = 505
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 232/440 (52%), Positives = 313/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDILGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +RK FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLIANDESRKTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM FMEVETP++ PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAGIRQFMVGRGFMEVETPMMQVIPGGASARPFVTHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y DF K FEKLT+ EAIKKY P+ + DL + K + + K + L
Sbjct: 310 QVPYGEETFDFGKPFEKLTMREAIKKYRPETDMADLDDFEKAKGIAQAVGIKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR+ N EN IT+RFE FI G EI
Sbjct: 370 RVVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARR-NDENPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF++Q+ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFQDQVAAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|259909550|ref|YP_002649906.1| lysyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
gi|387872530|ref|YP_005803914.1| lysyl-tRNA synthetase [Erwinia pyrifoliae DSM 12163]
gi|224965172|emb|CAX56704.1| Lysyl tRNA synthetase [Erwinia pyrifoliae Ep1/96]
gi|283479627|emb|CAY75543.1| lysyl-tRNA synthetase [Erwinia pyrifoliae DSM 12163]
Length = 506
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 235/442 (53%), Positives = 319/442 (72%), Gaps = 17/442 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G+IQLY+S + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFVTLQDV-----GGRIQLYVSRDDLADGIYNEQFKKWDLGDILGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI S L+L+TK+LRPLP+KF L++QE +YR RY+DLI N+++RK FK R+Q
Sbjct: 130 KTKTGELSIHCSELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANDDSRKTFKIRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR+FM DFMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 IMAGIRNFMVGRDFMEVETPMMQAIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF+++FEIN+NFRNEGISPRHNPEFTM+E Y AY +Y L++ TE + + + D +G+T
Sbjct: 250 GGFDRVFEINRNFRNEGISPRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGST 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKI-- 297
+ Y + DF K F +LT+ EAI KY PQ + DL + F KS + N +K
Sbjct: 310 VVPYGDQQFDFGKPFAQLTMKEAILKYRPQTDLADLAD--FEKSVAIAQSLGINVEKSWG 367
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L L +I FEET E L PT+IT YP E+SPLAR++++ + IT+RFE FI G
Sbjct: 368 LGRLVTEI-----FEETAEAHLIQPTFITEYPAEVSPLARRNDV-DPEITDRFEFFIGGR 421
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND ++Q+ RF Q++ K+ + E + +YD DY+ ALE+G+PP +G G+G+D
Sbjct: 422 EIGNGFSELNDAQDQAERFLQQVNAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGVGID 480
Query: 418 RLIMLLTNSKNIRDVILFPHLR 439
R++ML TNS IRDVILFP LR
Sbjct: 481 RMVMLFTNSHTIRDVILFPALR 502
>gi|417789894|ref|ZP_12437502.1| lysyl-tRNA synthetase [Cronobacter sakazakii E899]
gi|429116727|ref|ZP_19177645.1| Lysyl-tRNA synthetase (class II) [Cronobacter sakazakii 701]
gi|449306982|ref|YP_007439338.1| lysyl-tRNA ligase [Cronobacter sakazakii SP291]
gi|333956093|gb|EGL73788.1| lysyl-tRNA synthetase [Cronobacter sakazakii E899]
gi|426319856|emb|CCK03758.1| Lysyl-tRNA synthetase (class II) [Cronobacter sakazakii 701]
gi|449097015|gb|AGE85049.1| lysyl-tRNA ligase [Cronobacter sakazakii SP291]
Length = 505
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 232/440 (52%), Positives = 313/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDILGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +RK FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLIANDESRKTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM FMEVETP++ PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAGIRQFMVGRGFMEVETPMMQVIPGGASARPFVTHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y DF K FEKLT+ EAIKKY P+ + DL + K + + K + L
Sbjct: 310 QVPYGEETFDFGKPFEKLTMREAIKKYRPETDLADLDDFEKAKGIAQAVGIKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR+ N EN IT+RFE FI G EI
Sbjct: 370 RVVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARR-NDENPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF++Q+ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFQDQVAAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|191165676|ref|ZP_03027516.1| lysyl-tRNA synthetase LysU [Escherichia coli B7A]
gi|309796860|ref|ZP_07691262.1| lysyl-tRNA synthetase [Escherichia coli MS 145-7]
gi|190904371|gb|EDV64080.1| lysyl-tRNA synthetase LysU [Escherichia coli B7A]
gi|308119501|gb|EFO56763.1| lysyl-tRNA synthetase [Escherichia coli MS 145-7]
Length = 505
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 232/440 (52%), Positives = 315/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD +IQLY++ + + + +Y D FK +D+GDIIGA+GTLF
Sbjct: 75 MTRRIMGKASFVTLQDVGD-----RIQLYVARDSLPEGVYNDQFKKWDLGDIIGARGTLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE++YR RY+DLI N+ +R+ F R++
Sbjct: 130 KTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSK 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+++IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAAIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + + +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
K+ Y + DF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 KVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF+ Q++ K + E + +YD DY+ ALEYG+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAERFQEQVNAKAAGDDE-AMFYDEDYVTALEYGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
IML TNS IRDVILFP +R
Sbjct: 483 IMLFTNSHTIRDVILFPAMR 502
>gi|156932659|ref|YP_001436575.1| lysyl-tRNA synthetase [Cronobacter sakazakii ATCC BAA-894]
gi|389839714|ref|YP_006341798.1| lysyl-tRNA synthetase [Cronobacter sakazakii ES15]
gi|424800936|ref|ZP_18226478.1| Lysyl-tRNA synthetase (class II) [Cronobacter sakazakii 696]
gi|429119889|ref|ZP_19180587.1| Lysyl-tRNA synthetase (class II) [Cronobacter sakazakii 680]
gi|166229806|sp|A7MR65.1|SYK_CROS8 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|156530913|gb|ABU75739.1| hypothetical protein ESA_00442 [Cronobacter sakazakii ATCC BAA-894]
gi|387850190|gb|AFJ98287.1| lysyl-tRNA synthetase [Cronobacter sakazakii ES15]
gi|423236657|emb|CCK08348.1| Lysyl-tRNA synthetase (class II) [Cronobacter sakazakii 696]
gi|426325575|emb|CCK11324.1| Lysyl-tRNA synthetase (class II) [Cronobacter sakazakii 680]
Length = 505
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 232/440 (52%), Positives = 313/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDILGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +RK FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLIANDESRKTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM FMEVETP++ PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAGIRQFMVGRGFMEVETPMMQVIPGGASARPFVTHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y DF K FEKLT+ EAIKKY P+ + DL + K + + K + L
Sbjct: 310 QVPYGEETFDFGKPFEKLTMREAIKKYRPETDLADLDDFEKAKGIAQAVGIKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR+ N EN IT+RFE FI G EI
Sbjct: 370 RVVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARR-NDENPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF++Q+ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFQDQVAAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|237729830|ref|ZP_04560311.1| lysyl-tRNA synthetase [Citrobacter sp. 30_2]
gi|420368978|ref|ZP_14869709.1| lysyl-tRNA synthetase [Shigella flexneri 1235-66]
gi|226908436|gb|EEH94354.1| lysyl-tRNA synthetase [Citrobacter sp. 30_2]
gi|391321749|gb|EIQ78466.1| lysyl-tRNA synthetase [Shigella flexneri 1235-66]
Length = 505
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 234/440 (53%), Positives = 315/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDILGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 IMAGIRQFMVGRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + + +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQNVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y + DF K FEKLT+ EAI+KY P+ N DL N K+ + I K + L
Sbjct: 310 EVPYGEEVFDFGKPFEKLTMREAIQKYRPETNMADLDNFDSAKAIAESIGIKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR+ N EN IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARR-NDENPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF++Q++ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFQDQVNAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|383188745|ref|YP_005198873.1| lysyl-tRNA synthetase [Rahnella aquatilis CIP 78.65 = ATCC 33071]
gi|371587003|gb|AEX50733.1| lysyl-tRNA synthetase (class II) [Rahnella aquatilis CIP 78.65 =
ATCC 33071]
Length = 509
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 230/440 (52%), Positives = 314/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G+IQLY++ + + + +Y + FK +D+GDI+GA G LF
Sbjct: 77 MTRRIMGKASFVTLQDV-----GGRIQLYVARDDLAEGIYNEQFKKWDLGDILGATGKLF 131
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI S L+L+TK+LRPLP+KF L +QE +YR RY+DLI NE++RK FK R+Q
Sbjct: 132 KTKTGELSIHCSELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLIANEDSRKTFKIRSQ 191
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+S IR FM +N FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 192 IMSGIRSFMVENGFMEVETPMMQVIPGGAAARPFITHHNALDIDMYLRIAPELYLKRLVV 251
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF+++FEIN+NFRNEG+SPRHNPEFTM+E Y AY +Y L+ TE + + + +G++
Sbjct: 252 GGFDRVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYKDLIVLTESLFRTLTESVLGSS 311
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y + DF K F KLT+ EAI KY P+ N DL + + + + + L
Sbjct: 312 VVQYGDQTFDFGKPFAKLTMREAICKYRPETNVADLDDLAKATAIAESLGINIEKSWGLG 371
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEET E +L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 372 RIVTEI-----FEETAEAQLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 425
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q+ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 426 GNGFSELNDAEDQAQRFADQVSAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 484
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 485 VMLFTNSHTIRDVILFPAMR 504
>gi|429101634|ref|ZP_19163608.1| Lysyl-tRNA synthetase (class II) [Cronobacter turicensis 564]
gi|426288283|emb|CCJ89721.1| Lysyl-tRNA synthetase (class II) [Cronobacter turicensis 564]
Length = 505
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 231/440 (52%), Positives = 313/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDILGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +RK FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLIANDESRKTFKARSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM FMEVETP++ PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAGIRQFMVGRGFMEVETPMMQVIPGGASARPFVTHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + + +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQEVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y DF K FEKLT+ EAIKKY P+ + DL + K + + K + L
Sbjct: 310 QVPYGEETFDFGKPFEKLTMREAIKKYRPETDMADLDDFEKAKGIAQAVGIKIEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR+ N EN IT+RFE FI G EI
Sbjct: 370 RVVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARR-NDENPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF++Q+ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFQDQVAAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|260599229|ref|YP_003211800.1| lysyl-tRNA synthetase [Cronobacter turicensis z3032]
gi|260218406|emb|CBA33489.1| Lysyl-tRNA synthetase [Cronobacter turicensis z3032]
Length = 505
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 231/440 (52%), Positives = 313/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDILGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +RK FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLIANDESRKTFKARSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM FMEVETP++ PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAGIRQFMVGRGFMEVETPMMQVIPGGASARPFVTHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + + +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQEVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y DF K FEKLT+ EAIKKY P+ + DL + K + + K + L
Sbjct: 310 QVPYGEETFDFGKPFEKLTMREAIKKYRPETDMADLDDFEKAKGIAQAVGIKIEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR+ N EN IT+RFE FI G EI
Sbjct: 370 RVVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARR-NDENPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF++Q+ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFQDQVAAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|397164153|ref|ZP_10487611.1| lysine--tRNA ligase [Enterobacter radicincitans DSM 16656]
gi|396094708|gb|EJI92260.1| lysine--tRNA ligase [Enterobacter radicincitans DSM 16656]
Length = 505
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 231/440 (52%), Positives = 314/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLAEGVYNEQFKKWDLGDILGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM DFMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAGIRQFMVSRDFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + + +G T
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQNILGKT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y + DF K FEKLT+ EAIKKY P+ N DL N K+ + I K + L
Sbjct: 310 EVPYGDEVFDFGKPFEKLTMREAIKKYRPETNMADLDNFDSAKAIAESIGIKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q+ K+ + E + ++D DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFADQVAAKDAGDDE-AMFFDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|283788452|ref|YP_003368317.1| lysyl-tRNA synthetase [Citrobacter rodentium ICC168]
gi|282951906|emb|CBG91624.1| lysyl-tRNA synthetase [Citrobacter rodentium ICC168]
Length = 505
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 231/440 (52%), Positives = 315/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGIYNEQFKKWDLGDILGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELS+ + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSVHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKIRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAGIRQFMVGRGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y + DF K FEKLT+ EAIKKY P+ + +L N K+ + I K + L
Sbjct: 310 QVPYGDEVFDFGKPFEKLTMREAIKKYRPETDMAELDNFDSAKAIAESIGIKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF++Q+D K + E + ++D DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFQDQVDAKAAGDDE-AMFFDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|146312949|ref|YP_001178023.1| lysyl-tRNA synthetase [Enterobacter sp. 638]
gi|166980067|sp|A4WE42.1|SYK_ENT38 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|145319825|gb|ABP61972.1| lysyl-tRNA synthetase [Enterobacter sp. 638]
Length = 505
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 234/444 (52%), Positives = 315/444 (70%), Gaps = 21/444 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY+S + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVSRDDLPEGIYNEQFKKWDLGDILGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +RK FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRKTFKIRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM DFMEVETP++ PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 IMAGIRQFMVGRDFMEVETPMMQVIPGGASARPFVTHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + + +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQNILGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQN----KLFLKSELKKINPKFNQK 295
++ Y + DF K F KLT+ EAIKKY P+ DL N K +S K+ + Q
Sbjct: 310 EVPYGDEVFDFGKPFVKLTMREAIKKYRPETEMADLDNYDSAKAIAESIGIKVEKSWGQG 369
Query: 296 KILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFII 355
+I+ +FEE E L PT+IT YP E+SPLAR+ N EN IT+RFE FI
Sbjct: 370 RIVTE---------IFEEVAEAHLIQPTFITEYPAEVSPLARR-NDENPEITDRFEFFIG 419
Query: 356 GNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIG 415
G EI NGFSELND ++Q+ RF++Q+D K + E + ++D DY+ ALE+G+PP +G GIG
Sbjct: 420 GREIGNGFSELNDAQDQAQRFQDQVDAKAAGDDE-AMFFDEDYVTALEHGLPPTAGLGIG 478
Query: 416 VDRLIMLLTNSKNIRDVILFPHLR 439
+DR++ML TNS IRDVILFP +R
Sbjct: 479 IDRMVMLFTNSHTIRDVILFPAMR 502
>gi|383181450|ref|YP_005459455.1| lysyl-tRNA synthetase [Shigella sonnei 53G]
gi|415851714|ref|ZP_11528305.1| lysyl-tRNA synthetase [Shigella sonnei 53G]
gi|323164582|gb|EFZ50382.1| lysyl-tRNA synthetase [Shigella sonnei 53G]
Length = 505
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 232/440 (52%), Positives = 315/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y D FK +D+GDIIGA+GTLF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDSLPEGVYNDQFKKWDLGDIIGARGTLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE++YR RY+DLI N+ +R+ F R++
Sbjct: 130 KTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSK 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+++IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAAIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + + +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
K+ Y + DF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 KVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIITEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF+ Q++ K + E + +YD DY+ ALEYG+PP + GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAERFQEQVNAKAAGDDE-AMFYDEDYVTALEYGLPPTADLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
IML TNS IRDVILFP +R
Sbjct: 483 IMLFTNSHTIRDVILFPAMR 502
>gi|258544155|ref|ZP_05704389.1| lysine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
gi|258520597|gb|EEV89456.1| lysine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
Length = 497
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 227/441 (51%), Positives = 318/441 (72%), Gaps = 11/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M KRVMGK SF +QD SG ++Q+Y+S + + + Y DFK +D+GDII A+G LF+
Sbjct: 68 MSKRVMGKASFTAIQDGSG----ARMQIYLSRDELPEGRYADFKTWDVGDIISARGKLFR 123
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGEL+I ++L+TKSLRPLP K+ LS+QE +YR RY+DLI NE++R F R++I
Sbjct: 124 TQTGELTIHADDVELLTKSLRPLPEKYHGLSDQETRYRQRYVDLITNEDSRNTFIIRSKI 183
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+S IR F E DF+EVETP++H PGGA AKPFITHHN+L+M ++LRIAPELYLKRL++G
Sbjct: 184 VSYIRRFFEARDFLEVETPMMHPIPGGATAKPFITHHNALDMPLYLRIAPELYLKRLVVG 243
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN++FRNEG+S RHNPEFTM+E+Y AY +Y LM TE++ + + + +G+ +
Sbjct: 244 GFERVFEINRSFRNEGVSTRHNPEFTMLEYYQAYADYHDLMDQTEELFQGLAREVLGSPQ 303
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQG +D + F +LT+++AI+++ PQ+ I L + L + L+ ++K
Sbjct: 304 ITYQGVAIDLGQPFARLTMLDAIRQHAPQHAAI-LDDPAALAAVLRDT----YKQKADAA 358
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
+ L +LFEE E +L PT+IT YP+ +SPLAR+ N + +I +RFELFI G E+A
Sbjct: 359 MPIGSLHTLLFEEAVEHQLVQPTFITAYPSVVSPLARR-NDDTPDICDRFELFIGGREVA 417
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RF+ Q + + E + +YD DYI ALEYGMPP +G GIG+DRL+
Sbjct: 418 NGFSELNDAEDQAERFRAQAAAFDAGDDE-AMHYDADYIRALEYGMPPTAGEGIGIDRLV 476
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT++ +IRDV+LFPH+R E
Sbjct: 477 MLLTDAPSIRDVLLFPHMRPE 497
>gi|386616969|ref|YP_006136635.1| lysyl-tRNA synthetase LysS [Escherichia coli UMNK88]
gi|332346138|gb|AEE59472.1| lysyl-tRNA synthetase LysS [Escherichia coli UMNK88]
Length = 505
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 232/440 (52%), Positives = 315/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y D FK +D+GDIIGA+GTLF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDSLPEGVYNDQFKKWDLGDIIGARGTLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE++YR RY+DLI N+ +R+ F R++
Sbjct: 130 KTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSK 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+++IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAAIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + + +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
K+ Y + DF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 KVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF+ Q++ K + E + +YD DY+ ALEYG+PP + GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAERFQEQVNAKAAGDDE-AMFYDEDYVTALEYGLPPTAVLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
IML TNS IRDVILFP +R
Sbjct: 483 IMLFTNSHTIRDVILFPAMR 502
>gi|333928925|ref|YP_004502504.1| Lysyl-tRNA synthetase [Serratia sp. AS12]
gi|333933878|ref|YP_004507456.1| lysyl-tRNA synthetase [Serratia plymuthica AS9]
gi|386330748|ref|YP_006026918.1| lysyl-tRNA synthetase [Serratia sp. AS13]
gi|333475485|gb|AEF47195.1| Lysyl-tRNA synthetase [Serratia plymuthica AS9]
gi|333492985|gb|AEF52147.1| Lysyl-tRNA synthetase [Serratia sp. AS12]
gi|333963081|gb|AEG29854.1| Lysyl-tRNA synthetase [Serratia sp. AS13]
Length = 505
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 228/440 (51%), Positives = 315/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLAEGIYNEQFKKWDLGDILGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L++QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR+FM + FMEVETP++ PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 VMAGIRNFMVERGFMEVETPMMQVIPGGASARPFVTHHNALDIDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEG+SPRHNPEFTM+E Y AY +Y L++ TE + + + D +G T
Sbjct: 250 GGFERVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYKDLIELTESLFRTLTQDVLGKT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y + DF K F KLT+ EAIKKY P+ DL + + + I K + L
Sbjct: 310 QVQYGDEVFDFGKPFVKLTMTEAIKKYRPETELADLADMGKAVAIAESIGIKIEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E+ L PT+IT YP E+SPLAR+ N EN IT+RFE FI G EI
Sbjct: 370 RVVTEI-----FEEVAESHLIQPTFITEYPAEVSPLARR-NDENPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q++ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFADQVNAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|300718199|ref|YP_003743002.1| lysyl-tRNA synthetase [Erwinia billingiae Eb661]
gi|299064035|emb|CAX61155.1| Lysyl-tRNA synthetase [Erwinia billingiae Eb661]
Length = 506
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 234/440 (53%), Positives = 315/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY+S + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVSRDDLAEGIYNEQFKKWDLGDIVGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI S L+L+TK+LRPLP+KF L++QE +YR RY+DLI NE +RK FK R+Q
Sbjct: 130 KTKTGELSIHCSELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANEESRKTFKIRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM +FMEVETP++ PGGA A+PF THHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 IMAGIRSFMVGREFMEVETPMMQVIPGGASARPFTTHHNALDIDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF+++FEIN+NFRNEGISPRHNPEFTM+E Y AY +Y L++ TE + + + D +G T
Sbjct: 250 GGFDRVFEINRNFRNEGISPRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGNT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y + DF K F+KLT+ EAI KY P+ N DL + + + + K + L
Sbjct: 310 VVPYGEQEFDFGKPFDKLTMKEAILKYRPETNLADLDDFDKAAAIAQSLGIKIEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
L +I FEET E+ L PT+IT YP E+SPLAR+ N EN IT+RFE FI G EI
Sbjct: 370 RLVTEI-----FEETAESHLIQPTFITEYPAEVSPLARR-NDENPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND ++Q+ RF Q++ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAQDQAERFLQQVNAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|283835351|ref|ZP_06355092.1| lysine--tRNA ligase [Citrobacter youngae ATCC 29220]
gi|291068516|gb|EFE06625.1| lysine--tRNA ligase [Citrobacter youngae ATCC 29220]
Length = 505
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 232/440 (52%), Positives = 316/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDILGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 IMAGIRQFMVGRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + + +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQNVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y + DF K FEKLT+ EAI+KY P+ N DL N K+ + I K + L
Sbjct: 310 EVPYGEEVFDFGKPFEKLTMREAIQKYRPETNMADLDNFDSAKAIAESIGIKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF++Q++ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFQDQVNAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|386824239|ref|ZP_10111376.1| lysyl-tRNA synthetase [Serratia plymuthica PRI-2C]
gi|386378823|gb|EIJ19623.1| lysyl-tRNA synthetase [Serratia plymuthica PRI-2C]
Length = 505
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 227/440 (51%), Positives = 317/440 (72%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLAEGIYNEQFKKWDLGDILGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L++QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR+FM + FMEVETP++ PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 VMAGIRNFMVERGFMEVETPMMQVIPGGASARPFVTHHNALDIDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEG+SPRHNPEFTM+E Y AY +Y L++ TE + + + + +G T
Sbjct: 250 GGFERVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYKDLIELTESLFRTLTQNVLGKT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y + DF K FEKLT+ EAIKKY P+ + DL + + + I K + L
Sbjct: 310 QVQYGDEVFDFGKPFEKLTMTEAIKKYRPETDLADLADMSKAVAIAESIGIKIEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E+ L PT+IT YP E+SPLAR+ N +N IT+RFE FI G EI
Sbjct: 370 RVVTEI-----FEEVAESHLIQPTFITEYPAEVSPLARR-NDDNPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q++ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFADQVNAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|429081690|ref|ZP_19144792.1| Lysyl-tRNA synthetase (class II) [Cronobacter condimenti 1330]
gi|426549825|emb|CCJ70833.1| Lysyl-tRNA synthetase (class II) [Cronobacter condimenti 1330]
Length = 505
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 231/440 (52%), Positives = 313/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDILGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +RK FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLIANDESRKTFKARSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM FMEVETP++ PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAGIRQFMVGRGFMEVETPMMQVIPGGASARPFVTHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y DF K FEKLT+ EAIKKY P+ + DL + K + I K + L
Sbjct: 310 LVPYGDETFDFGKPFEKLTMREAIKKYRPETDLADLDDFEKAKGIAQSIGIKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RVVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF++Q+ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFQDQVAAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|354599123|ref|ZP_09017140.1| Lysyl-tRNA synthetase [Brenneria sp. EniD312]
gi|353677058|gb|EHD23091.1| Lysyl-tRNA synthetase [Brenneria sp. EniD312]
Length = 505
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 230/440 (52%), Positives = 312/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY+S + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVSRDDLAEGVYNEQFKKWDLGDILGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELS+ + L+L+TK+LRPLP+KF L++QE +YR RY+DLI NE +R F+ R+Q
Sbjct: 130 KTKTGELSVHCTELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANEESRHTFRIRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
++++IR FM + FMEVETP++ PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 VMAAIRRFMVDHGFMEVETPMMQVIPGGAAARPFVTHHNALDIDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGISPRHNPEFTM+E Y AY +Y L+ TE + + + D +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISPRHNPEFTMMELYMAYADYKDLIVLTETLFRTLTQDVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
I+Y + DF K F KLT+ EAI Y P+ N DL + + + + K + L
Sbjct: 310 TIEYGDQTFDFGKPFAKLTMREAICTYRPETNVADLDDLAKATAIAESLGIKIEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEET E+ L PT+IT YP E+SPLAR+ N N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEETAESNLIQPTFITEYPAEVSPLARR-NDRNPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF Q+ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAERFAQQVSAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
IML TNS IRDVILFP +R
Sbjct: 483 IMLFTNSHTIRDVILFPAMR 502
>gi|227328401|ref|ZP_03832425.1| lysyl-tRNA synthetase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 505
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 229/440 (52%), Positives = 315/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY+S + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVSRDDLAEGIYNEQFKKWDLGDILGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L++QE +YR RY+DLI N+ +R F+ R+
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANDESRNTFRIRSN 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
++++IR FM N FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 VMAAIRRFMVDNGFMEVETPMMQVIPGGASARPFITHHNALDIDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEG+SPRHNPEFTM+E Y AY +Y L+ TE + + + D +G+T
Sbjct: 250 GGFERVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYKDLIVLTENLFRTLTQDVLGST 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++Y + DF K FEKLT+ EAI KY P+ N DL + + + + K + L
Sbjct: 310 TVEYGDQTFDFGKPFEKLTMREAICKYRPETNVADLDDLEKATAIAQSLGIKIEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEET E+ L PT+IT YP E+SPLAR+ N +N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEETAESSLIQPTFITEYPAEVSPLARR-NDQNPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF Q++ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAERFAQQVNAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|450196868|ref|ZP_21892926.1| lysyl-tRNA ligase [Escherichia coli SEPT362]
gi|449315153|gb|EMD05302.1| lysyl-tRNA ligase [Escherichia coli SEPT362]
Length = 505
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 232/440 (52%), Positives = 315/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y D FK +D+GDIIGA+GTLF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDSLPEGVYNDQFKKWDLGDIIGARGTLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE++YR RY+DLI N+ +R+ F R++
Sbjct: 130 KTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSK 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+++IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAAIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + + +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
K+ Y + DF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 KVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF+ Q++ K + E + +YD DY+ ALEYG+ P +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAERFQEQVNAKAAGDDE-AMFYDEDYVTALEYGLLPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
IML TNS IRDVILFP +R
Sbjct: 483 IMLFTNSHTIRDVILFPAMR 502
>gi|256821964|ref|YP_003145927.1| lysyl-tRNA synthetase [Kangiella koreensis DSM 16069]
gi|256795503|gb|ACV26159.1| lysyl-tRNA synthetase [Kangiella koreensis DSM 16069]
Length = 499
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 228/441 (51%), Positives = 317/441 (71%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
ML R MGK SFI +QD SG +IQ Y+ + +G ++Y DFK +DIGDI+G +GT+FK
Sbjct: 71 MLFRNMGKASFITIQDMSG-----RIQSYVRKDAVGDDVYDDFKTWDIGDIVGIEGTVFK 125
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS+K S+++L+TK+LRPLP+K+ LS+QE +YR RY+DLI+NE +R+ F R+++
Sbjct: 126 TNKGELSVKASNIRLLTKALRPLPDKWSGLSDQETRYRQRYVDLIVNEESRETFIIRSKV 185
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+ +IR F+E DF+EVETP++H PGGA A+PF THHN+L+M ++LR+APELYLKRL++G
Sbjct: 186 VKAIRDFLESRDFLEVETPMMHVIPGGASARPFETHHNALDMPLYLRVAPELYLKRLVVG 245
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G K++EIN+NFRNEG+S RHNPEFTM+EFY Y +Y LM TE M++ + +G T
Sbjct: 246 GLEKVYEINRNFRNEGLSTRHNPEFTMLEFYWGYADYNDLMDLTEAMLRHTVETVLGKTV 305
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ G DF K F ++T++EAI KY P+ L + + K++ K + L
Sbjct: 306 FESSGETYDFGKPFARMTVLEAITKYQPEITLEQLSDLDKARDVAKRLKIKTEKSWGLGK 365
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
+Q+ +FEE E KL PT+IT YP E+SPLAR+ N E+ +T+RFE F G E+A
Sbjct: 366 -----VQIEIFEEVAEHKLIQPTFITAYPAEVSPLARR-NDEDPFVTDRFEFFAGGRELA 419
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RFK Q++ K+ + E + +YD DYI ALEYG+PP +G GIG+DRL+
Sbjct: 420 NGFSELNDAEDQAERFKAQVEAKDAGDDE-AMHYDADYIRALEYGLPPTAGEGIGIDRLV 478
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S +IRDV+LFPH+R E
Sbjct: 479 MLLTDSPSIRDVLLFPHMRPE 499
>gi|430760731|ref|YP_007216588.1| Lysyl-tRNA synthetase (class II) [Thioalkalivibrio nitratireducens
DSM 14787]
gi|430010355|gb|AGA33107.1| Lysyl-tRNA synthetase (class II) [Thioalkalivibrio nitratireducens
DSM 14787]
Length = 506
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 230/445 (51%), Positives = 320/445 (71%), Gaps = 22/445 (4%)
Query: 3 KRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
KRVMGK SF+ L+D SG IQL++ + + + +Y FK +D+GD++GA+GTLFKT
Sbjct: 79 KRVMGKASFVTLRDLSG-----DIQLFVQRDALPEGVYAAFKQWDLGDVLGARGTLFKTR 133
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
TGELSI+V L+L+TKSLRPLP KF LS+QE +YR RY+DLI + TR++F+ RT+II
Sbjct: 134 TGELSIQVRELRLLTKSLRPLPEKFHGLSDQETRYRQRYVDLITSPETRELFRVRTRIIQ 193
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
IR + F+EVETP++ PGGA A+PFITHHN+L+M ++LRIAPELYLKRL++GGF
Sbjct: 194 YIRDYFTGEGFLEVETPMMQAIPGGATARPFITHHNALSMDLYLRIAPELYLKRLVVGGF 253
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
K+FEIN+NFRNEG+S RHNPEFTM+EFY A+ + LM TE +++ + + +GTT+I
Sbjct: 254 EKVFEINRNFRNEGLSTRHNPEFTMLEFYEAFVTHHELMDRTEALVRGLCTEVLGTTQIS 313
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKIN----PKFNQKKIL 298
YQG + DF++ F ++T+ EAI + P DL ++ ++ +++ P + K
Sbjct: 314 YQGEVHDFAQPFVRMTVREAILAFNPDIPAGDLDDEDRMRMYCERLGIPLKPGYGLGK-- 371
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
L + +FE+T E L +PT+IT YPTE+SPLAR+ N ++ +T+RFE F+ G E
Sbjct: 372 -------LWIEVFEKTVEANLRHPTFITAYPTEVSPLARR-NDQDPFVTDRFEFFVGGRE 423
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSS-YYDTDYIHALEYGMPPASGCGIGVD 417
IANGFSELNDPE+Q+ RF+ Q+ K G+L + +YD DYI ALEYG+PP +G GIG+D
Sbjct: 424 IANGFSELNDPEDQAERFRAQVSEKE--AGDLEAMHYDADYIRALEYGLPPTAGEGIGID 481
Query: 418 RLIMLLTNSKNIRDVILFPHLRNEN 442
RL+MLLT++ +IRDV+LFPHLR E
Sbjct: 482 RLVMLLTDAASIRDVLLFPHLRPET 506
>gi|157148426|ref|YP_001455745.1| lysyl-tRNA synthetase [Citrobacter koseri ATCC BAA-895]
gi|166229805|sp|A8AP96.1|SYK_CITK8 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|157085631|gb|ABV15309.1| hypothetical protein CKO_04251 [Citrobacter koseri ATCC BAA-895]
Length = 505
Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust.
Identities = 232/440 (52%), Positives = 314/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDILGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 IMAGIRQFMVGRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +G T
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y + DF K FEKLT+ EAIKKY P+ + DL N K+ + I K + L
Sbjct: 310 EVPYGDEVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGIKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF++Q++ K E + + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFQDQVNAK-EAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|378581169|ref|ZP_09829819.1| class II lysyl-tRNA synthetase [Pantoea stewartii subsp. stewartii
DC283]
gi|377816248|gb|EHT99353.1| class II lysyl-tRNA synthetase [Pantoea stewartii subsp. stewartii
DC283]
Length = 506
Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust.
Identities = 234/440 (53%), Positives = 315/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SFI LQD G +IQLY++ + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFITLQDVGG-----RIQLYVARDDLPEGIYNEQFKKWDLGDILGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELS+ S L+L+TK+LRPLP+KF L++QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSVHCSELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANDESRNTFKIRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM DFMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 IMAGIRQFMVARDFMEVETPMMQVIPGGASARPFITHHNALDIDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF+++FEIN+NFRNEGISPRHNPEFTM+E Y AY +Y L++ TE + + + D +G+T
Sbjct: 250 GGFDRVFEINRNFRNEGISPRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGST 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y + DF K FEKLT+ EAIKKY P+ + DL + + + I K + L
Sbjct: 310 VVPYGEQKFDFGKPFEKLTMREAIKKYRPETDLADLDDFDKAVAVAQAIGIKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEET E L PT+IT YP E+SPLAR+ N EN IT+RFE FI EI
Sbjct: 370 RVVTEI-----FEETAEAHLIQPTFITEYPAEVSPLARR-NDENPEITDRFEFFIGRREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND ++Q+ RF Q++ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAQDQADRFLQQVNAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP LR
Sbjct: 483 VMLFTNSHTIRDVILFPALR 502
>gi|253687050|ref|YP_003016240.1| lysyl-tRNA synthetase [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|259511528|sp|C6D8Z6.1|SYK_PECCP RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|251753628|gb|ACT11704.1| lysyl-tRNA synthetase [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 505
Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust.
Identities = 228/440 (51%), Positives = 316/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY+S + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVSRDDLAEGIYNEQFKKWDLGDILGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L++QE +YR RY+DLI N+ +R F+ R++
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANDESRNTFRIRSK 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
++++IR FM + FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 VMAAIRSFMVDHGFMEVETPMMQVIPGGASARPFITHHNALDIDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEG+SPRHNPEFTM+E Y AY +Y L+ TE + + + D +G+T
Sbjct: 250 GGFERVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYKDLIVLTENLFRTLTQDVLGST 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++Y + DF K FEKLT+ EAI KY P+ N DL + + + + K + L
Sbjct: 310 TVEYGDQTFDFGKPFEKLTMREAICKYRPETNVADLDDLEKATAIAQSLGIKIEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEET E+ L PT+IT YP E+SPLAR+ N +N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEETAESSLIQPTFITEYPAEVSPLARR-NDQNPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF Q++ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAERFAQQVNAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|220934634|ref|YP_002513533.1| lysyl-tRNA synthetase [Thioalkalivibrio sulfidophilus HL-EbGr7]
gi|259511536|sp|B8GRJ2.1|SYK_THISH RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|219995944|gb|ACL72546.1| lysyl-tRNA synthetase [Thioalkalivibrio sulfidophilus HL-EbGr7]
Length = 499
Score = 486 bits (1251), Expect = e-135, Method: Compositional matrix adjust.
Identities = 224/442 (50%), Positives = 321/442 (72%), Gaps = 12/442 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M KR+MGK SF + D SG +IQL+I + + Y+DFK +D+GDI+GA+GTLFK
Sbjct: 70 MAKRIMGKASFTQILDMSG-----RIQLFIQRDSLPDGAYSDFKTWDVGDILGAEGTLFK 124
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGEL++ V SL+L+TKSLRPLP KF LS+ E +YR RY+DLI+NE R+ F+ RT++
Sbjct: 125 TKTGELTVNVDSLRLLTKSLRPLPEKFHGLSDTETRYRQRYVDLIMNEPVRETFRTRTRV 184
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I IR F+++ F+EVETP++ PGGA A+PF THH++L+M++FLRIAPELYLKRL++G
Sbjct: 185 IQFIRQFLDQRGFLEVETPMMQAIPGGATARPFATHHHALDMQLFLRIAPELYLKRLVVG 244
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF +++EIN+NFRNEG+S RHNPEFTM+EFY AY NY LM TE +++ + ++ +G+T+
Sbjct: 245 GFERVYEINRNFRNEGLSTRHNPEFTMVEFYEAYANYHDLMDLTEDLLRDLTLEVLGSTQ 304
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQG DF + F ++T+ E+I ++ P +E +L + ++ +++ L
Sbjct: 305 VHYQGETYDFERPFTRMTVKESILQHNPDVSEAELADLERARAVAQRLGIPLKDSYGLGK 364
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
+ +I FE+T E L +PT+IT YPTE+SPLAR+ N E+ +T+RFE F+ G EIA
Sbjct: 365 VWIEI-----FEKTVEGNLKDPTFITAYPTEVSPLARR-NDEDPFVTDRFEFFVGGREIA 418
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RF+ Q+ K E + + ++D DY+ ALE+GMPP +G GIG+DRL+
Sbjct: 419 NGFSELNDYEDQAERFRKQVQEK-EAGDDEAMHFDADYLRALEHGMPPTAGEGIGIDRLV 477
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S +IRDV+LFPH+R E+
Sbjct: 478 MLLTDSPSIRDVLLFPHMRPES 499
>gi|377577236|ref|ZP_09806219.1| lysyl-tRNA synthetase [Escherichia hermannii NBRC 105704]
gi|377541764|dbj|GAB51384.1| lysyl-tRNA synthetase [Escherichia hermannii NBRC 105704]
Length = 505
Score = 486 bits (1251), Expect = e-135, Method: Compositional matrix adjust.
Identities = 231/440 (52%), Positives = 314/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+ A+G LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDILAARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 IMAGIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +G T
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGKT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y + DF K FEKLT+ EAIKKY P+ N DL N K+ + I K + L
Sbjct: 310 EVPYGDEVFDFGKPFEKLTMREAIKKYRPETNMADLDNFDSAKAIAESIGIKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF++Q++ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFQDQVNAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|320540120|ref|ZP_08039775.1| lysine tRNA synthetase, constitutive [Serratia symbiotica str.
Tucson]
gi|320029786|gb|EFW11810.1| lysine tRNA synthetase, constitutive [Serratia symbiotica str.
Tucson]
Length = 505
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 229/440 (52%), Positives = 317/440 (72%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + ++Y + FK +D+GDIIGA+G LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDELAADVYNEQFKKWDLGDIIGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELS+ L+L+TK+LRPLP+KF L++QE +YR RY+DLI NE +R FK R+Q
Sbjct: 130 KTKTGELSVHCVELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANEGSRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++S+R+FM + FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 IMASMRNFMVERGFMEVETPMMQVIPGGASARPFITHHNALDIDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEG+SPRHNPEFTM+E Y AY +Y L++ TE + + + +GT+
Sbjct: 250 GGFERVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYNDLIELTESLFRTLAEKVLGTS 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y + DF K FEKL++ EAIKKY P+ + DL + + + I K + L
Sbjct: 310 LVQYGDEVFDFGKPFEKLSMTEAIKKYRPETDLADLADMGKTVAIAESIGIKVVKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E+ L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RVVTEI-----FEEVAESHLIQPTFITEYPAEVSPLARRNDL-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q++ K+ + E + +YD DY+ ALEYG+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFADQMNAKDAGDDE-AMFYDEDYVTALEYGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|300936045|ref|ZP_07150993.1| lysyl-tRNA synthetase [Escherichia coli MS 21-1]
gi|432681490|ref|ZP_19916855.1| lysyl-tRNA synthetase [Escherichia coli KTE143]
gi|300458837|gb|EFK22330.1| lysyl-tRNA synthetase [Escherichia coli MS 21-1]
gi|431218715|gb|ELF16148.1| lysyl-tRNA synthetase [Escherichia coli KTE143]
Length = 505
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 234/440 (53%), Positives = 312/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y D FK +D+GDI+GAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNDQFKKWDLGDILGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+S IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +G T
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y LDF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 EVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q+ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFLDQVAAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|218550137|ref|YP_002383928.1| lysyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
gi|422780172|ref|ZP_16832957.1| lysyl-tRNA synthetase [Escherichia coli TW10509]
gi|422804286|ref|ZP_16852718.1| lysyl-tRNA synthetase [Escherichia fergusonii B253]
gi|424817431|ref|ZP_18242582.1| lysyl-tRNA synthetase [Escherichia fergusonii ECD227]
gi|432888141|ref|ZP_20101893.1| lysyl-tRNA synthetase [Escherichia coli KTE158]
gi|218357678|emb|CAQ90319.1| lysine tRNA synthetase, constitutive [Escherichia fergusonii ATCC
35469]
gi|323978819|gb|EGB73900.1| lysyl-tRNA synthetase [Escherichia coli TW10509]
gi|324115094|gb|EGC09059.1| lysyl-tRNA synthetase [Escherichia fergusonii B253]
gi|325498451|gb|EGC96310.1| lysyl-tRNA synthetase [Escherichia fergusonii ECD227]
gi|431414596|gb|ELG97147.1| lysyl-tRNA synthetase [Escherichia coli KTE158]
Length = 505
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 234/440 (53%), Positives = 312/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y D FK +D+GDI+GAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNDQFKKWDLGDILGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+S IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +G T
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y LDF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 EVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q+ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFLDQVAAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|416899192|ref|ZP_11928674.1| lysyl-tRNA synthetase [Escherichia coli STEC_7v]
gi|417119558|ref|ZP_11969923.1| lysine--tRNA ligase [Escherichia coli 1.2741]
gi|422800827|ref|ZP_16849324.1| lysyl-tRNA synthetase [Escherichia coli M863]
gi|323966690|gb|EGB62122.1| lysyl-tRNA synthetase [Escherichia coli M863]
gi|327251652|gb|EGE63338.1| lysyl-tRNA synthetase [Escherichia coli STEC_7v]
gi|386137911|gb|EIG79073.1| lysine--tRNA ligase [Escherichia coli 1.2741]
Length = 505
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 234/440 (53%), Positives = 312/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y D FK +D+GDI+GAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNDQFKKWDLGDILGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+S IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +G T
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y LDF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 EVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q+ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFLDQVAAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|78485071|ref|YP_390996.1| lysyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
gi|78363357|gb|ABB41322.1| lysyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
Length = 504
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 235/443 (53%), Positives = 327/443 (73%), Gaps = 13/443 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLY-TDFKNYDIGDIIGAKGTLF 59
+L+R+MGK SF LQDT +G+IQ+Y++ + + + Y T FK +D+GDI+GA+G LF
Sbjct: 74 LLRRIMGKASFATLQDT-----HGRIQIYVTRDELPEGFYNTQFKKWDLGDIVGAEGYLF 128
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KTNTGELS+ V ++LITKSLRPLP+KF L +QEIKYR RY+DLI+NE +R F R++
Sbjct: 129 KTNTGELSVHVEHIELITKSLRPLPDKFHGLQDQEIKYRQRYVDLIVNEESRDTFMIRSK 188
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+ +R+F+ FMEVETP++H PGGA AKPF THHN+L+M ++LRIAPELYLKRL++
Sbjct: 189 IVQHVRNFLINKGFMEVETPMMHVIPGGATAKPFHTHHNALDMPLYLRIAPELYLKRLVV 248
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF K+FEIN++FRNEG+S RHNPEFTM+EFY+AYT+Y LM +TE+++K++ +G++
Sbjct: 249 GGFEKVFEINRSFRNEGLSTRHNPEFTMVEFYSAYTDYNQLMDYTEELLKELAELTVGSS 308
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ YQG++ DF K F +LT+ +AI KY P +L + ++ K +N + L
Sbjct: 309 QVPYQGQVFDFGKPFARLTMKDAILKYNPSATAENLDDLESARALAKSLNVHVEESYGLG 368
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEET E KL +PT+IT YP E+SPLAR+ N +N IT+RFELFI G E+
Sbjct: 369 KIWTEI-----FEETAEEKLMDPTFITEYPAEVSPLARR-NDDNPFITDRFELFIGGREL 422
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
ANGF+ELND E+Q+ RFK Q++ K+ + E + +YD DYI ALE+GMPP +G GIG+DRL
Sbjct: 423 ANGFNELNDAEDQAERFKAQVEAKDAGDDE-AMHYDEDYIVALEHGMPPTAGEGIGIDRL 481
Query: 420 IMLLTNSKNIRDVILFPHLRNEN 442
+ML T+ IRDV+LFPH+R +
Sbjct: 482 VMLFTDKPTIRDVLLFPHMRQAD 504
>gi|403057118|ref|YP_006645335.1| lysyl-tRNA synthetase [Pectobacterium carotovorum subsp.
carotovorum PCC21]
gi|402804444|gb|AFR02082.1| lysyl-tRNA synthetase [Pectobacterium carotovorum subsp.
carotovorum PCC21]
Length = 505
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 228/440 (51%), Positives = 315/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G+IQLY+S + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFVTLQDV-----GGRIQLYVSRDDLAEGIYNEQFKKWDLGDILGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L++QE +YR RY+DLI N+ +R F+ R++
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANDESRNTFRIRSK 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
++++IR FM + FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 VMAAIRSFMVDHGFMEVETPMMQVIPGGASARPFITHHNALDIDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEG+SPRHNPEFTM+E Y AY +Y L+ TE + + + D +G+T
Sbjct: 250 GGFERVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYKDLIVLTENLFRTLTQDVLGST 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y + DF K FEKLT+ EAI KY P+ N DL + + + + K + L
Sbjct: 310 TVQYGDQTFDFGKPFEKLTMREAICKYRPETNVADLDDLEKATAIAQSLGIKIEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEET E+ L PT+IT YP E+SPLAR+ N +N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEETAESSLIQPTFITEYPAEVSPLARR-NDQNPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF Q++ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAERFAQQVNAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|417691161|ref|ZP_12340378.1| lysyl-tRNA synthetase [Shigella boydii 5216-82]
gi|332086814|gb|EGI91950.1| lysyl-tRNA synthetase [Shigella boydii 5216-82]
Length = 505
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 234/440 (53%), Positives = 313/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDILGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE++YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLISNDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+S IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +G T
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y LDF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 EVTYGDVTLDFGKPFEKLTMHEAIKKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR+++I N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARRNDI-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q+ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFLDQVAAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|365921383|ref|ZP_09445665.1| lysine--tRNA ligase [Cardiobacterium valvarum F0432]
gi|364576241|gb|EHM53577.1| lysine--tRNA ligase [Cardiobacterium valvarum F0432]
Length = 500
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 231/441 (52%), Positives = 315/441 (71%), Gaps = 11/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M KRVMGK SF +QD SG +IQLY+S + + + Y DFK +D+GD I A G LF+
Sbjct: 71 MRKRVMGKASFCEIQDGSG----ARIQLYLSRDELPEGCYADFKTWDVGDTITASGHLFR 126
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+ + +++L+TKSLRPLP K+ L++QE +YR RY+DLI+NE++R +F R +I
Sbjct: 127 TKTGELSLHLKNIRLLTKSLRPLPEKYHGLTDQETRYRQRYVDLIMNEDSRAIFLTRNKI 186
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+ IR F E++DF+EVETP++H PGGA A+PFITHHN+L+M ++LRIAPELYLKRL++G
Sbjct: 187 VRYIRRFFEEHDFLEVETPMMHPIPGGATARPFITHHNALDMPLYLRIAPELYLKRLVVG 246
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN++FRNEG+S RHNPEFTM+EFY AY +Y LM TE + + I D +
Sbjct: 247 GFERVFEINRSFRNEGLSTRHNPEFTMLEFYWAYADYRDLMNLTETLFRGIKRDVLDNQN 306
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I G +D + +E+LT+++AI ++ P Y+ +KL + L I ++K+ N
Sbjct: 307 ITAGGETIDLDQPYERLTMLDAIHRHAPAYS-----DKLHDAAALAAILRDEYKQKVDEN 361
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
L +LFEET ETKL PT+IT YP SPL+R+ N EN +I +RFEL+I G EIA
Sbjct: 362 TPLGHLHTLLFEETAETKLIQPTFITEYPAVDSPLSRR-NDENPDICDRFELYIGGREIA 420
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RF+ Q K+ + E + +YD DY+ ALEYGMPP +G GIG+DRL+
Sbjct: 421 NGFSELNDAEDQAERFRAQAAAKDAGDDE-AMHYDADYVRALEYGMPPTAGEGIGIDRLV 479
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT + +IRDVILFPH+R E
Sbjct: 480 MLLTGAPSIRDVILFPHMRPE 500
>gi|152969073|ref|YP_001334182.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
gi|238893514|ref|YP_002918248.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|365138692|ref|ZP_09345339.1| lysyl-tRNA synthetase [Klebsiella sp. 4_1_44FAA]
gi|378977470|ref|YP_005225611.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|386033630|ref|YP_005953543.1| lysyl-tRNA synthetase [Klebsiella pneumoniae KCTC 2242]
gi|402781989|ref|YP_006637535.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
1084]
gi|419762192|ref|ZP_14288441.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae DSM
30104]
gi|419975031|ref|ZP_14490445.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|419980977|ref|ZP_14496257.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|419988132|ref|ZP_14503234.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|419993437|ref|ZP_14508378.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|419998029|ref|ZP_14512820.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|420005227|ref|ZP_14519853.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|420009821|ref|ZP_14524301.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|420015991|ref|ZP_14530287.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|420021343|ref|ZP_14535524.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|420026866|ref|ZP_14540865.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|420034032|ref|ZP_14547827.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|420038977|ref|ZP_14552618.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|420045506|ref|ZP_14558972.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|420050298|ref|ZP_14563599.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|420056981|ref|ZP_14570129.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|420062293|ref|ZP_14575268.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|420067323|ref|ZP_14580117.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|420072429|ref|ZP_14585067.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|420079853|ref|ZP_14592291.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|420083877|ref|ZP_14596149.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|421912265|ref|ZP_16341994.1| Lysyl-tRNA synthetase (class II) [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|421915130|ref|ZP_16344752.1| Lysyl-tRNA synthetase (class II) [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
gi|424829433|ref|ZP_18254161.1| lysyl-tRNA synthetase LysS homolog [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|424934648|ref|ZP_18353020.1| Lysyl-tRNA synthetase 1 (Lysine--tRNA ligase 1) [Klebsiella
pneumoniae subsp. pneumoniae KpQ3]
gi|425077853|ref|ZP_18480956.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
WGLW1]
gi|425080316|ref|ZP_18483413.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
WGLW2]
gi|425088486|ref|ZP_18491579.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
WGLW3]
gi|425090377|ref|ZP_18493462.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
WGLW5]
gi|428150773|ref|ZP_18998533.1| Lysyl-tRNA synthetase (class II) [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
gi|428936057|ref|ZP_19009493.1| lysyl-tRNA ligase [Klebsiella pneumoniae JHCK1]
gi|428943609|ref|ZP_19016477.1| lysyl-tRNA ligase [Klebsiella pneumoniae VA360]
gi|150953922|gb|ABR75952.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
gi|218117880|dbj|BAH03311.1| lysyl-tRNA synthetase [Klebsiella pneumoniae NTUH-K2044]
gi|238545830|dbj|BAH62181.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|339760758|gb|AEJ96978.1| lysyl-tRNA synthetase [Klebsiella pneumoniae KCTC 2242]
gi|363654847|gb|EHL93726.1| lysyl-tRNA synthetase [Klebsiella sp. 4_1_44FAA]
gi|364516881|gb|AEW60009.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|397341686|gb|EJJ34860.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|397344133|gb|EJJ37270.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|397344290|gb|EJJ37425.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|397358531|gb|EJJ51249.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|397361312|gb|EJJ53976.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|397362828|gb|EJJ55474.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|397375571|gb|EJJ67856.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|397380528|gb|EJJ72710.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|397386932|gb|EJJ78989.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|397393538|gb|EJJ85293.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|397394531|gb|EJJ86258.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|397403721|gb|EJJ95272.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|397409592|gb|EJK00902.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|397411571|gb|EJK02825.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|397419988|gb|EJK11095.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|397428396|gb|EJK19138.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|397428448|gb|EJK19186.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|397439171|gb|EJK29630.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|397443213|gb|EJK33543.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|397450750|gb|EJK40848.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|397745110|gb|EJK92319.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae DSM
30104]
gi|402542854|gb|AFQ67003.1| Lysyl-tRNA synthetase (class II) [Klebsiella pneumoniae subsp.
pneumoniae 1084]
gi|405590832|gb|EKB64345.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
WGLW1]
gi|405601578|gb|EKB74731.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
WGLW3]
gi|405607241|gb|EKB80211.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
WGLW2]
gi|405614061|gb|EKB86782.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
WGLW5]
gi|407808835|gb|EKF80086.1| Lysyl-tRNA synthetase 1 (Lysine--tRNA ligase 1) [Klebsiella
pneumoniae subsp. pneumoniae KpQ3]
gi|410113844|emb|CCM84619.1| Lysyl-tRNA synthetase (class II) [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|410122567|emb|CCM87377.1| Lysyl-tRNA synthetase (class II) [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
gi|414706854|emb|CCN28558.1| lysyl-tRNA synthetase LysS homolog [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|426296404|gb|EKV59046.1| lysyl-tRNA ligase [Klebsiella pneumoniae VA360]
gi|426299144|gb|EKV61500.1| lysyl-tRNA ligase [Klebsiella pneumoniae JHCK1]
gi|427539276|emb|CCM94671.1| Lysyl-tRNA synthetase (class II) [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
Length = 505
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 229/440 (52%), Positives = 315/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +RVMGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDII A+G LF
Sbjct: 75 MTRRVMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDIIAARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE++YR RY+DLI NE +R F+ R+Q
Sbjct: 130 KTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANEESRHTFRIRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++++R FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILATMRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + +G T
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQTVLGKT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y ++ DF K FEKLT+ EAIKK+ P+ N DL N K+ + I + + L
Sbjct: 310 EVPYGDQVFDFGKPFEKLTMREAIKKHRPETNMADLDNFDAAKALAESIGIQVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF++Q++ K + E + +YD DY+ ALEYG+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFQDQVNAKAAGDDE-AMFYDEDYVTALEYGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|340000564|ref|YP_004731448.1| lysyl tRNA synthetase [Salmonella bongori NCTC 12419]
gi|339513926|emb|CCC31685.1| lysyl tRNA synthetase (LysRS) [Salmonella bongori NCTC 12419]
Length = 505
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 231/440 (52%), Positives = 313/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y D FK +D+GDI+GAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNDQFKKWDLGDILGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R++
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKTRSK 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAGIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y + DF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 QVPYGDEVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q++ K + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFLDQVNAKAAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|444352723|ref|YP_007388867.1| Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) [Enterobacter
aerogenes EA1509E]
gi|443903553|emb|CCG31327.1| Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) [Enterobacter
aerogenes EA1509E]
Length = 505
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 228/440 (51%), Positives = 316/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDII A+G LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDIIAARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE++YR RY+DLI NE++R F+ R+Q
Sbjct: 130 KTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANEDSRHTFRIRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++++R FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILATMRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + +G T
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQTVLGKT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y ++ DF K FEKLT+ EAIKK+ P+ N DL N K+ + I + + L
Sbjct: 310 EVPYGDQVFDFGKPFEKLTMREAIKKHRPETNMADLDNFDAAKALAESIGIQVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF++Q++ K + E + +YD DY+ ALEYG+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFQDQVNAKAAGDDE-AMFYDEDYVTALEYGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|423119071|ref|ZP_17106755.1| lysyl-tRNA synthetase [Klebsiella oxytoca 10-5246]
gi|376399717|gb|EHT12331.1| lysyl-tRNA synthetase [Klebsiella oxytoca 10-5246]
Length = 505
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 229/440 (52%), Positives = 314/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDII A+G LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDIIAARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE++YR RY+DLI N+ +R+ FK R+Q
Sbjct: 130 KTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANDESRRTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++++R FM FMEVETP++ PGGA A+PFITHHN+L+M M+LRIAPELYLKRL++
Sbjct: 190 ILATMRQFMVGRGFMEVETPMMQVIPGGASARPFITHHNALDMDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + +G T
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQTVLGKT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y ++ DF K FEKLT+ EAIKKY P+ DL N K+ + I + L
Sbjct: 310 EVPYGDQIFDFGKPFEKLTMREAIKKYRPETEMADLDNFDAAKALAESIGIHVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF++Q++ K + E + +YD DY+ ALEYG+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFQDQVNAKAAGDDE-AMFYDEDYVTALEYGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|227112637|ref|ZP_03826293.1| lysyl-tRNA synthetase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 505
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 228/440 (51%), Positives = 315/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G+IQLY+S + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFVTLQDV-----GGRIQLYVSRDDLAEGIYNEQFKKWDLGDILGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L++QE +YR RY+DLI N+ +R F+ R++
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANDESRNTFRIRSK 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
++++IR FM + FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 VMAAIRSFMVDHGFMEVETPMMQVIPGGASARPFITHHNALDIDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEG+SPRHNPEFTM+E Y AY +Y L+ TE + + + D +G+T
Sbjct: 250 GGFERVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYKDLIVLTENLFRTLTQDVLGST 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y + DF K FEKLT+ EAI KY P+ N DL + + + + K + L
Sbjct: 310 TVQYGDQTFDFGKPFEKLTMREAICKYRPETNVADLDDLEKATAIAQSLGIKIEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEET E+ L PT+IT YP E+SPLAR+ N +N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEETAESSLIQPTFITEYPAEVSPLARR-NDQNPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF Q++ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAERFAQQVNAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPTMR 502
>gi|261855043|ref|YP_003262326.1| lysyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
gi|261835512|gb|ACX95279.1| lysyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
Length = 511
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 231/446 (51%), Positives = 323/446 (72%), Gaps = 22/446 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M KR+MGK SF+ + D SG +IQLY++ + +G+ Y DFK +DIGDI+G +G LFK
Sbjct: 83 MAKRLMGKASFLSILDHSG-----RIQLYVARDALGEATYDDFKTWDIGDIVGGEGALFK 137
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T GELS++V S++L+TKSLRPLP+KF +S+ E +YR RY+DLI+NE R F+KRTQI
Sbjct: 138 TQKGELSVRVDSIRLLTKSLRPLPDKFHGMSDTEQRYRQRYVDLIMNEPVRDTFRKRTQI 197
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I +R+++ DF+EVETP++H PGGA AKPF T HN+L+M ++LRIAPELYLKRL++G
Sbjct: 198 IQFMRNYLNAKDFLEVETPMMHVIPGGASAKPFTTFHNALDMDLYLRIAPELYLKRLVVG 257
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF +++EIN+NFRNEG+S RHNPEFTMIEFY AY +YI LM TE +++++ G+T
Sbjct: 258 GFERVYEINRNFRNEGLSTRHNPEFTMIEFYQAYADYIDLMDMTEDLLRRLSESVCGSTT 317
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTP-----QYNEIDLQNKLFLKSELKKINPKFNQK 295
+ YQG D ++ F +L+++ AI ++ P Q ++ID ++ +E IN
Sbjct: 318 LTYQGVEFDLAQPFARLSVVNAILEHNPDVTREQLSDIDSARRI---AEGLGIN------ 368
Query: 296 KILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFII 355
I ++ +Q+ +FEET E KL PT+IT YP E+SPLAR+S+ +N +T+RFE FI
Sbjct: 369 -IKDSYGLGKIQIEIFEETAEHKLIQPTFITEYPAEVSPLARRSD-DNPFVTDRFEFFIG 426
Query: 356 GNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIG 415
G EIANGFSELND E+Q+ RF Q+ K+ + E + ++D+DYI ALE+GMPP +G GIG
Sbjct: 427 GREIANGFSELNDAEDQAERFMAQVAEKDAGDDE-AMHFDSDYIRALEHGMPPTAGEGIG 485
Query: 416 VDRLIMLLTNSKNIRDVILFPHLRNE 441
+DRL+M LT+S +IRDV+LFPH+R E
Sbjct: 486 IDRLVMFLTDSPSIRDVLLFPHMRPE 511
>gi|170766125|ref|ZP_02900936.1| lysyl-tRNA synthetase LysS [Escherichia albertii TW07627]
gi|170125271|gb|EDS94202.1| lysyl-tRNA synthetase LysS [Escherichia albertii TW07627]
Length = 505
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 233/440 (52%), Positives = 312/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDILGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+S IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +G T
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y LDF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 EVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF++Q+ K E + + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFQDQVAAK-EAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|157372123|ref|YP_001480112.1| lysyl-tRNA synthetase [Serratia proteamaculans 568]
gi|166980070|sp|A8GIP4.1|SYK_SERP5 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|157323887|gb|ABV42984.1| lysyl-tRNA synthetase [Serratia proteamaculans 568]
Length = 505
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 225/440 (51%), Positives = 318/440 (72%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLAEGVYNEEFKKWDLGDILGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L++QE +YR RY+DLI N+ +RK F+ R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANDESRKTFQVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++++R+FM + FMEVETP++ PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 IMAAMRNFMVERGFMEVETPMMQVIPGGASARPFVTHHNALDIDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEG+SPRHNPEFTM+E Y AY +Y L++ TE + + + + +G T
Sbjct: 250 GGFERVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYKDLIELTESLFRTLTQNVLGNT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y + DF K F KLT+ EAIKKY P+ + DL + + + I K + L
Sbjct: 310 QVQYGDEVFDFGKPFVKLTMTEAIKKYRPETDLADLADMGKAVAIAESIGIKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E+ L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RVVTEI-----FEEVAESHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q + K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFADQANAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|423127894|ref|ZP_17115573.1| lysyl-tRNA synthetase [Klebsiella oxytoca 10-5250]
gi|376394933|gb|EHT07583.1| lysyl-tRNA synthetase [Klebsiella oxytoca 10-5250]
Length = 505
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 229/440 (52%), Positives = 313/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDII A+G LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLAEGVYNEQFKKWDLGDIIAARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI NE +R FK R+Q
Sbjct: 130 KTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNEESRHTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++++R FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILATMRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + + +G T
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQNVLGKT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y ++ DF K FEKLT+ EAIKKY P+ DL N K+ + I + L
Sbjct: 310 EVPYGDQVFDFGKPFEKLTMREAIKKYRPETEMADLDNFDAAKALAESIGIHVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF++Q++ K + E + +YD DY+ ALEYG+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFQDQVNAKAAGDDE-AMFYDEDYVTALEYGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|288941014|ref|YP_003443254.1| lysyl-tRNA synthetase [Allochromatium vinosum DSM 180]
gi|288896386|gb|ADC62222.1| lysyl-tRNA synthetase [Allochromatium vinosum DSM 180]
Length = 505
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 225/445 (50%), Positives = 325/445 (73%), Gaps = 17/445 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKN-YDIGDIIGAKGTLF 59
M +RVMGK SF +QD S +IQ+++ + +G+ Y FK D+GDIIG +G +F
Sbjct: 74 MTRRVMGKASFAHIQDMSA-----RIQVFVQRDQVGEETYDHFKRELDLGDIIGVEGQVF 128
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELS++ SL+L+TK+LRPLP KF L++ E +YR RY+DLI+N TR F+ RT
Sbjct: 129 KTKTGELSVRCDSLRLLTKALRPLPEKFHGLTDMESRYRQRYLDLIMNTGTRDTFRVRTA 188
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+ IR ++ ++EVETP++ PGGA+A+PFITHHN+L+M++FLRIAPEL+LKRL++
Sbjct: 189 IVQFIRDYLNGRGYLEVETPMMQVIPGGAVARPFITHHNALDMQLFLRIAPELFLKRLVV 248
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF K++EIN+NFRNEG+S RHNPEFTM+EFY AY +Y LM TE M++++ ++ +GTT
Sbjct: 249 GGFEKVYEINRNFRNEGLSTRHNPEFTMLEFYEAYADYHDLMDLTEDMLRRMAIEVLGTT 308
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKK--INPKFNQKKI 297
+I YQG DF + F +L++ +AI ++ P+ D+ + L++ +++ + PK
Sbjct: 309 QIQYQGANYDFGRPFARLSVRDAILQFNPELTAADVDDLDRLRAVVERHGVVPKATW--- 365
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L K LQ+ LFE+T E++L +PT+IT YPTE+SPLAR+ N E+ ++T+RFELF+ G
Sbjct: 366 --GLGK--LQVELFEQTVESRLMDPTFITRYPTEVSPLARR-NDEDPSVTDRFELFVGGR 420
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EIANGFSELND E+Q+ RF+ Q+ + E + + YYD DY+ ALE+G+PP +G GIG+D
Sbjct: 421 EIANGFSELNDAEDQAERFRAQV-AEKEAGDQEAMYYDADYVRALEHGLPPTAGEGIGID 479
Query: 418 RLIMLLTNSKNIRDVILFPHLRNEN 442
RL+ML T+S +IRDV+LFPH+R E+
Sbjct: 480 RLVMLFTDSPSIRDVLLFPHMRPES 504
>gi|375259449|ref|YP_005018619.1| lysyl-tRNA synthetase [Klebsiella oxytoca KCTC 1686]
gi|397656516|ref|YP_006497218.1| lysyl-tRNA synthetase [Klebsiella oxytoca E718]
gi|402841452|ref|ZP_10889903.1| lysine--tRNA ligase [Klebsiella sp. OBRC7]
gi|423101739|ref|ZP_17089441.1| lysyl-tRNA synthetase [Klebsiella oxytoca 10-5242]
gi|365908927|gb|AEX04380.1| lysyl-tRNA synthetase [Klebsiella oxytoca KCTC 1686]
gi|376390565|gb|EHT03248.1| lysyl-tRNA synthetase [Klebsiella oxytoca 10-5242]
gi|394345103|gb|AFN31224.1| Lysyl-tRNA synthetase (class II) [Klebsiella oxytoca E718]
gi|402283273|gb|EJU31794.1| lysine--tRNA ligase [Klebsiella sp. OBRC7]
Length = 505
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 229/440 (52%), Positives = 312/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDII A+G LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLAEGVYNEQFKKWDLGDIIAARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI NE +R FK R+Q
Sbjct: 130 KTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNEESRHTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++++R FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILATMRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + +G T
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQTVLGKT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y ++ DF K FEKLT+ EAIKKY P+ DL N K+ + I + L
Sbjct: 310 EVPYGDQVFDFGKPFEKLTMREAIKKYRPETEMADLDNFEAAKALAESIGIHVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF++Q++ K + E + +YD DY+ ALEYG+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFQDQVNAKAAGDDE-AMFYDEDYVTALEYGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|15803426|ref|NP_289459.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. EDL933]
gi|15833016|ref|NP_311789.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
gi|168747633|ref|ZP_02772655.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4113]
gi|168753827|ref|ZP_02778834.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4401]
gi|168760017|ref|ZP_02785024.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4501]
gi|168766882|ref|ZP_02791889.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4486]
gi|168775766|ref|ZP_02800773.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4196]
gi|168778902|ref|ZP_02803909.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4076]
gi|168785735|ref|ZP_02810742.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC869]
gi|168800022|ref|ZP_02825029.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC508]
gi|195936507|ref|ZP_03081889.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4024]
gi|208809534|ref|ZP_03251871.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4206]
gi|208814126|ref|ZP_03255455.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4045]
gi|208818755|ref|ZP_03259075.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4042]
gi|209398148|ref|YP_002272364.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
gi|217327355|ref|ZP_03443438.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. TW14588]
gi|254794841|ref|YP_003079678.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
gi|261226203|ref|ZP_05940484.1| lysine tRNA synthetase, constitutive [Escherichia coli O157:H7 str.
FRIK2000]
gi|261256542|ref|ZP_05949075.1| lysine tRNA synthetase, constitutive [Escherichia coli O157:H7 str.
FRIK966]
gi|387884080|ref|YP_006314382.1| lysyl-tRNA synthetase [Escherichia coli Xuzhou21]
gi|416314492|ref|ZP_11658727.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044]
gi|416322053|ref|ZP_11663901.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212]
gi|416327794|ref|ZP_11667714.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125]
gi|416776994|ref|ZP_11875028.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101]
gi|416788454|ref|ZP_11879953.1| lysyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89]
gi|416800441|ref|ZP_11884865.1| lysyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687]
gi|416832086|ref|ZP_11899376.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61]
gi|419046743|ref|ZP_13593678.1| lysyl-tRNA synthetase [Escherichia coli DEC3A]
gi|419052644|ref|ZP_13599511.1| lysyl-tRNA synthetase [Escherichia coli DEC3B]
gi|419058637|ref|ZP_13605440.1| lysyl-tRNA synthetase [Escherichia coli DEC3C]
gi|419064134|ref|ZP_13610857.1| lysyl-tRNA synthetase [Escherichia coli DEC3D]
gi|419071080|ref|ZP_13616695.1| lysyl-tRNA synthetase [Escherichia coli DEC3E]
gi|419077292|ref|ZP_13622795.1| lysyl-tRNA synthetase [Escherichia coli DEC3F]
gi|419082105|ref|ZP_13627552.1| lysyl-tRNA synthetase [Escherichia coli DEC4A]
gi|419087944|ref|ZP_13633297.1| lysyl-tRNA synthetase [Escherichia coli DEC4B]
gi|419094111|ref|ZP_13639393.1| lysyl-tRNA synthetase [Escherichia coli DEC4C]
gi|419099889|ref|ZP_13645082.1| lysyl-tRNA synthetase [Escherichia coli DEC4D]
gi|419105450|ref|ZP_13650577.1| lysyl-tRNA synthetase [Escherichia coli DEC4E]
gi|419110914|ref|ZP_13655968.1| lysyl-tRNA synthetase [Escherichia coli DEC4F]
gi|420271021|ref|ZP_14773375.1| lysine--tRNA ligase [Escherichia coli PA22]
gi|420276919|ref|ZP_14779201.1| lysine--tRNA ligase [Escherichia coli PA40]
gi|420281890|ref|ZP_14784123.1| lysine--tRNA ligase [Escherichia coli TW06591]
gi|420288058|ref|ZP_14790242.1| lysine--tRNA ligase [Escherichia coli TW10246]
gi|420293922|ref|ZP_14796037.1| lysine--tRNA ligase [Escherichia coli TW11039]
gi|420299839|ref|ZP_14801885.1| lysine--tRNA ligase [Escherichia coli TW09109]
gi|420305846|ref|ZP_14807836.1| lysine--tRNA ligase [Escherichia coli TW10119]
gi|420310961|ref|ZP_14812891.1| lysine--tRNA ligase [Escherichia coli EC1738]
gi|420316673|ref|ZP_14818546.1| lysine--tRNA ligase [Escherichia coli EC1734]
gi|421813907|ref|ZP_16249619.1| lysine--tRNA ligase [Escherichia coli 8.0416]
gi|421819727|ref|ZP_16255218.1| lysine--tRNA ligase [Escherichia coli 10.0821]
gi|421825731|ref|ZP_16261086.1| lysine--tRNA ligase [Escherichia coli FRIK920]
gi|421832431|ref|ZP_16267714.1| lysine--tRNA ligase [Escherichia coli PA7]
gi|423726769|ref|ZP_17700730.1| lysine--tRNA ligase [Escherichia coli PA31]
gi|424079026|ref|ZP_17816000.1| lysine--tRNA ligase [Escherichia coli FDA505]
gi|424085481|ref|ZP_17821976.1| lysine--tRNA ligase [Escherichia coli FDA517]
gi|424091893|ref|ZP_17827826.1| lysine--tRNA ligase [Escherichia coli FRIK1996]
gi|424098541|ref|ZP_17833830.1| lysine--tRNA ligase [Escherichia coli FRIK1985]
gi|424104766|ref|ZP_17839517.1| lysine--tRNA ligase [Escherichia coli FRIK1990]
gi|424111419|ref|ZP_17845655.1| lysine--tRNA ligase [Escherichia coli 93-001]
gi|424117355|ref|ZP_17851193.1| lysine--tRNA ligase [Escherichia coli PA3]
gi|424123542|ref|ZP_17856858.1| lysine--tRNA ligase [Escherichia coli PA5]
gi|424129696|ref|ZP_17862603.1| lysine--tRNA ligase [Escherichia coli PA9]
gi|424136015|ref|ZP_17868470.1| lysine--tRNA ligase [Escherichia coli PA10]
gi|424142561|ref|ZP_17874438.1| lysine--tRNA ligase [Escherichia coli PA14]
gi|424148970|ref|ZP_17880346.1| lysine--tRNA ligase [Escherichia coli PA15]
gi|424154803|ref|ZP_17885743.1| lysine--tRNA ligase [Escherichia coli PA24]
gi|424252638|ref|ZP_17891304.1| lysine--tRNA ligase [Escherichia coli PA25]
gi|424330992|ref|ZP_17897211.1| lysine--tRNA ligase [Escherichia coli PA28]
gi|424451244|ref|ZP_17902926.1| lysine--tRNA ligase [Escherichia coli PA32]
gi|424457436|ref|ZP_17908556.1| lysine--tRNA ligase [Escherichia coli PA33]
gi|424463889|ref|ZP_17914289.1| lysine--tRNA ligase [Escherichia coli PA39]
gi|424470202|ref|ZP_17920021.1| lysine--tRNA ligase [Escherichia coli PA41]
gi|424476717|ref|ZP_17926035.1| lysine--tRNA ligase [Escherichia coli PA42]
gi|424482478|ref|ZP_17931457.1| lysine--tRNA ligase [Escherichia coli TW07945]
gi|424488647|ref|ZP_17937202.1| lysine--tRNA ligase [Escherichia coli TW09098]
gi|424495260|ref|ZP_17942920.1| lysine--tRNA ligase [Escherichia coli TW09195]
gi|424502008|ref|ZP_17948899.1| lysine--tRNA ligase [Escherichia coli EC4203]
gi|424508255|ref|ZP_17954649.1| lysine--tRNA ligase [Escherichia coli EC4196]
gi|424515599|ref|ZP_17960250.1| lysine--tRNA ligase [Escherichia coli TW14313]
gi|424521808|ref|ZP_17965928.1| lysine--tRNA ligase [Escherichia coli TW14301]
gi|424527687|ref|ZP_17971404.1| lysine--tRNA ligase [Escherichia coli EC4421]
gi|424533840|ref|ZP_17977188.1| lysine--tRNA ligase [Escherichia coli EC4422]
gi|424539894|ref|ZP_17982838.1| lysine--tRNA ligase [Escherichia coli EC4013]
gi|424546006|ref|ZP_17988386.1| lysine--tRNA ligase [Escherichia coli EC4402]
gi|424552237|ref|ZP_17994086.1| lysine--tRNA ligase [Escherichia coli EC4439]
gi|424558415|ref|ZP_17999828.1| lysine--tRNA ligase [Escherichia coli EC4436]
gi|424564753|ref|ZP_18005757.1| lysine--tRNA ligase [Escherichia coli EC4437]
gi|424570897|ref|ZP_18011447.1| lysine--tRNA ligase [Escherichia coli EC4448]
gi|424577055|ref|ZP_18017113.1| lysine--tRNA ligase [Escherichia coli EC1845]
gi|424582874|ref|ZP_18022521.1| lysine--tRNA ligase [Escherichia coli EC1863]
gi|425099547|ref|ZP_18502279.1| lysine--tRNA ligase [Escherichia coli 3.4870]
gi|425105644|ref|ZP_18507963.1| lysine--tRNA ligase [Escherichia coli 5.2239]
gi|425111657|ref|ZP_18513578.1| lysine--tRNA ligase [Escherichia coli 6.0172]
gi|425127578|ref|ZP_18528747.1| lysine--tRNA ligase [Escherichia coli 8.0586]
gi|425133314|ref|ZP_18534164.1| lysine--tRNA ligase [Escherichia coli 8.2524]
gi|425139899|ref|ZP_18540280.1| lysine--tRNA ligase [Escherichia coli 10.0833]
gi|425145607|ref|ZP_18545604.1| lysine--tRNA ligase [Escherichia coli 10.0869]
gi|425151721|ref|ZP_18551336.1| lysine--tRNA ligase [Escherichia coli 88.0221]
gi|425157595|ref|ZP_18556859.1| lysine--tRNA ligase [Escherichia coli PA34]
gi|425163947|ref|ZP_18562834.1| lysine--tRNA ligase [Escherichia coli FDA506]
gi|425169689|ref|ZP_18568163.1| lysine--tRNA ligase [Escherichia coli FDA507]
gi|425175752|ref|ZP_18573872.1| lysine--tRNA ligase [Escherichia coli FDA504]
gi|425181787|ref|ZP_18579483.1| lysine--tRNA ligase [Escherichia coli FRIK1999]
gi|425188054|ref|ZP_18585329.1| lysine--tRNA ligase [Escherichia coli FRIK1997]
gi|425194823|ref|ZP_18591592.1| lysine--tRNA ligase [Escherichia coli NE1487]
gi|425201296|ref|ZP_18597505.1| lysine--tRNA ligase [Escherichia coli NE037]
gi|425207685|ref|ZP_18603482.1| lysine--tRNA ligase [Escherichia coli FRIK2001]
gi|425213439|ref|ZP_18608841.1| lysine--tRNA ligase [Escherichia coli PA4]
gi|425219561|ref|ZP_18614525.1| lysine--tRNA ligase [Escherichia coli PA23]
gi|425226112|ref|ZP_18620580.1| lysine--tRNA ligase [Escherichia coli PA49]
gi|425232370|ref|ZP_18626411.1| lysine--tRNA ligase [Escherichia coli PA45]
gi|425238294|ref|ZP_18632014.1| lysine--tRNA ligase [Escherichia coli TT12B]
gi|425244529|ref|ZP_18637835.1| lysine--tRNA ligase [Escherichia coli MA6]
gi|425256504|ref|ZP_18649019.1| lysine--tRNA ligase [Escherichia coli CB7326]
gi|425262760|ref|ZP_18654764.1| lysine--tRNA ligase [Escherichia coli EC96038]
gi|425268759|ref|ZP_18660389.1| lysine--tRNA ligase [Escherichia coli 5412]
gi|425296207|ref|ZP_18686384.1| lysine--tRNA ligase [Escherichia coli PA38]
gi|425312898|ref|ZP_18702079.1| lysine--tRNA ligase [Escherichia coli EC1735]
gi|425318884|ref|ZP_18707674.1| lysine--tRNA ligase [Escherichia coli EC1736]
gi|425324969|ref|ZP_18713331.1| lysine--tRNA ligase [Escherichia coli EC1737]
gi|425331334|ref|ZP_18719176.1| lysine--tRNA ligase [Escherichia coli EC1846]
gi|425337514|ref|ZP_18724874.1| lysine--tRNA ligase [Escherichia coli EC1847]
gi|425343835|ref|ZP_18730726.1| lysine--tRNA ligase [Escherichia coli EC1848]
gi|425349642|ref|ZP_18736111.1| lysine--tRNA ligase [Escherichia coli EC1849]
gi|425355941|ref|ZP_18742009.1| lysine--tRNA ligase [Escherichia coli EC1850]
gi|425361902|ref|ZP_18747550.1| lysine--tRNA ligase [Escherichia coli EC1856]
gi|425368108|ref|ZP_18753242.1| lysine--tRNA ligase [Escherichia coli EC1862]
gi|425374433|ref|ZP_18759077.1| lysine--tRNA ligase [Escherichia coli EC1864]
gi|425387326|ref|ZP_18770885.1| lysine--tRNA ligase [Escherichia coli EC1866]
gi|425393979|ref|ZP_18777088.1| lysine--tRNA ligase [Escherichia coli EC1868]
gi|425400114|ref|ZP_18782821.1| lysine--tRNA ligase [Escherichia coli EC1869]
gi|425406203|ref|ZP_18788426.1| lysine--tRNA ligase [Escherichia coli EC1870]
gi|425412588|ref|ZP_18794352.1| lysine--tRNA ligase [Escherichia coli NE098]
gi|425418913|ref|ZP_18800184.1| lysine--tRNA ligase [Escherichia coli FRIK523]
gi|425430174|ref|ZP_18810786.1| lysine--tRNA ligase [Escherichia coli 0.1304]
gi|428948605|ref|ZP_19020885.1| lysine--tRNA ligase [Escherichia coli 88.1467]
gi|428954688|ref|ZP_19026486.1| lysine--tRNA ligase [Escherichia coli 88.1042]
gi|428960676|ref|ZP_19031972.1| lysine--tRNA ligase [Escherichia coli 89.0511]
gi|428967292|ref|ZP_19038005.1| lysine--tRNA ligase [Escherichia coli 90.0091]
gi|428973119|ref|ZP_19043444.1| lysine--tRNA ligase [Escherichia coli 90.0039]
gi|428979375|ref|ZP_19049198.1| lysine--tRNA ligase [Escherichia coli 90.2281]
gi|428985206|ref|ZP_19054601.1| lysine--tRNA ligase [Escherichia coli 93.0055]
gi|428991400|ref|ZP_19060391.1| lysine--tRNA ligase [Escherichia coli 93.0056]
gi|428997281|ref|ZP_19065878.1| lysine--tRNA ligase [Escherichia coli 94.0618]
gi|429003563|ref|ZP_19071665.1| lysine--tRNA ligase [Escherichia coli 95.0183]
gi|429009646|ref|ZP_19077118.1| lysine--tRNA ligase [Escherichia coli 95.1288]
gi|429016181|ref|ZP_19083066.1| lysine--tRNA ligase [Escherichia coli 95.0943]
gi|429021999|ref|ZP_19088524.1| lysine--tRNA ligase [Escherichia coli 96.0428]
gi|429028070|ref|ZP_19094069.1| lysine--tRNA ligase [Escherichia coli 96.0427]
gi|429034254|ref|ZP_19099778.1| lysine--tRNA ligase [Escherichia coli 96.0939]
gi|429040338|ref|ZP_19105441.1| lysine--tRNA ligase [Escherichia coli 96.0932]
gi|429046105|ref|ZP_19110819.1| lysine--tRNA ligase [Escherichia coli 96.0107]
gi|429051617|ref|ZP_19116184.1| lysine--tRNA ligase [Escherichia coli 97.0003]
gi|429057032|ref|ZP_19121339.1| lysine--tRNA ligase [Escherichia coli 97.1742]
gi|429062527|ref|ZP_19126529.1| lysine--tRNA ligase [Escherichia coli 97.0007]
gi|429068796|ref|ZP_19132255.1| lysine--tRNA ligase [Escherichia coli 99.0672]
gi|429074716|ref|ZP_19137968.1| lysine--tRNA ligase [Escherichia coli 99.0678]
gi|429079948|ref|ZP_19143083.1| lysine--tRNA ligase [Escherichia coli 99.0713]
gi|429827970|ref|ZP_19358999.1| lysine--tRNA ligase [Escherichia coli 96.0109]
gi|429834338|ref|ZP_19364656.1| lysine--tRNA ligase [Escherichia coli 97.0010]
gi|444932187|ref|ZP_21251217.1| lysine--tRNA ligase [Escherichia coli 99.0814]
gi|444937611|ref|ZP_21256379.1| lysine--tRNA ligase [Escherichia coli 99.0815]
gi|444943261|ref|ZP_21261769.1| lysine--tRNA ligase [Escherichia coli 99.0816]
gi|444948715|ref|ZP_21267023.1| lysine--tRNA ligase [Escherichia coli 99.0839]
gi|444954284|ref|ZP_21272369.1| lysine--tRNA ligase [Escherichia coli 99.0848]
gi|444959794|ref|ZP_21277638.1| lysine--tRNA ligase [Escherichia coli 99.1753]
gi|444964929|ref|ZP_21282523.1| lysine--tRNA ligase [Escherichia coli 99.1775]
gi|444970949|ref|ZP_21288305.1| lysine--tRNA ligase [Escherichia coli 99.1793]
gi|444976214|ref|ZP_21293325.1| lysine--tRNA ligase [Escherichia coli 99.1805]
gi|444981622|ref|ZP_21298532.1| lysine--tRNA ligase [Escherichia coli ATCC 700728]
gi|444987027|ref|ZP_21303807.1| lysine--tRNA ligase [Escherichia coli PA11]
gi|444992324|ref|ZP_21308966.1| lysine--tRNA ligase [Escherichia coli PA19]
gi|444997630|ref|ZP_21314127.1| lysine--tRNA ligase [Escherichia coli PA13]
gi|445003205|ref|ZP_21319594.1| lysine--tRNA ligase [Escherichia coli PA2]
gi|445009849|ref|ZP_21326060.1| lysine--tRNA ligase [Escherichia coli PA47]
gi|445013741|ref|ZP_21329847.1| lysine--tRNA ligase [Escherichia coli PA48]
gi|445019640|ref|ZP_21335603.1| lysine--tRNA ligase [Escherichia coli PA8]
gi|445025025|ref|ZP_21340847.1| lysine--tRNA ligase [Escherichia coli 7.1982]
gi|445030445|ref|ZP_21346116.1| lysine--tRNA ligase [Escherichia coli 99.1781]
gi|445035868|ref|ZP_21351398.1| lysine--tRNA ligase [Escherichia coli 99.1762]
gi|445041495|ref|ZP_21356867.1| lysine--tRNA ligase [Escherichia coli PA35]
gi|445046722|ref|ZP_21361972.1| lysine--tRNA ligase [Escherichia coli 3.4880]
gi|445052265|ref|ZP_21367303.1| lysine--tRNA ligase [Escherichia coli 95.0083]
gi|445057995|ref|ZP_21372853.1| lysine--tRNA ligase [Escherichia coli 99.0670]
gi|452970783|ref|ZP_21969010.1| lysyl-tRNA ligase [Escherichia coli O157:H7 str. EC4009]
gi|39932437|sp|Q8XD57.3|SYK1_ECO57 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|12517416|gb|AAG58018.1|AE005519_4 lysine tRNA synthetase, constitutive; suppressor of ColE1 mutation
in primer RNA [Escherichia coli O157:H7 str. EDL933]
gi|13363234|dbj|BAB37185.1| lysine tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
gi|187768800|gb|EDU32644.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4196]
gi|188017948|gb|EDU56070.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4113]
gi|189003227|gb|EDU72213.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4076]
gi|189358608|gb|EDU77027.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4401]
gi|189363788|gb|EDU82207.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4486]
gi|189369387|gb|EDU87803.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4501]
gi|189373868|gb|EDU92284.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC869]
gi|189377631|gb|EDU96047.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC508]
gi|208729335|gb|EDZ78936.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4206]
gi|208735403|gb|EDZ84090.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4045]
gi|208738878|gb|EDZ86560.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4042]
gi|209159548|gb|ACI36981.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4115]
gi|209760608|gb|ACI78616.1| lysine tRNA synthetase [Escherichia coli]
gi|209760610|gb|ACI78617.1| lysine tRNA synthetase [Escherichia coli]
gi|209760612|gb|ACI78618.1| lysine tRNA synthetase [Escherichia coli]
gi|209760616|gb|ACI78620.1| lysine tRNA synthetase [Escherichia coli]
gi|217319722|gb|EEC28147.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. TW14588]
gi|254594241|gb|ACT73602.1| lysine tRNA synthetase, constitutive [Escherichia coli O157:H7 str.
TW14359]
gi|320189233|gb|EFW63892.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212]
gi|320640533|gb|EFX10072.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101]
gi|320645780|gb|EFX14765.1| lysyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89]
gi|320651080|gb|EFX19520.1| lysyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687]
gi|320667171|gb|EFX34134.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61]
gi|326339027|gb|EGD62842.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044]
gi|326343091|gb|EGD66859.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125]
gi|377891491|gb|EHU55943.1| lysyl-tRNA synthetase [Escherichia coli DEC3B]
gi|377892346|gb|EHU56792.1| lysyl-tRNA synthetase [Escherichia coli DEC3A]
gi|377904231|gb|EHU68518.1| lysyl-tRNA synthetase [Escherichia coli DEC3C]
gi|377908163|gb|EHU72381.1| lysyl-tRNA synthetase [Escherichia coli DEC3D]
gi|377910537|gb|EHU74725.1| lysyl-tRNA synthetase [Escherichia coli DEC3E]
gi|377919370|gb|EHU83413.1| lysyl-tRNA synthetase [Escherichia coli DEC3F]
gi|377925076|gb|EHU89017.1| lysyl-tRNA synthetase [Escherichia coli DEC4A]
gi|377929218|gb|EHU93118.1| lysyl-tRNA synthetase [Escherichia coli DEC4B]
gi|377939845|gb|EHV03599.1| lysyl-tRNA synthetase [Escherichia coli DEC4D]
gi|377941224|gb|EHV04970.1| lysyl-tRNA synthetase [Escherichia coli DEC4C]
gi|377946630|gb|EHV10310.1| lysyl-tRNA synthetase [Escherichia coli DEC4E]
gi|377956483|gb|EHV20033.1| lysyl-tRNA synthetase [Escherichia coli DEC4F]
gi|386797538|gb|AFJ30572.1| lysyl-tRNA synthetase [Escherichia coli Xuzhou21]
gi|390639713|gb|EIN19183.1| lysine--tRNA ligase [Escherichia coli FRIK1996]
gi|390641501|gb|EIN20926.1| lysine--tRNA ligase [Escherichia coli FDA517]
gi|390641911|gb|EIN21334.1| lysine--tRNA ligase [Escherichia coli FDA505]
gi|390659337|gb|EIN37104.1| lysine--tRNA ligase [Escherichia coli 93-001]
gi|390659731|gb|EIN37486.1| lysine--tRNA ligase [Escherichia coli FRIK1985]
gi|390662043|gb|EIN39670.1| lysine--tRNA ligase [Escherichia coli FRIK1990]
gi|390675786|gb|EIN51909.1| lysine--tRNA ligase [Escherichia coli PA3]
gi|390679292|gb|EIN55204.1| lysine--tRNA ligase [Escherichia coli PA5]
gi|390682796|gb|EIN58539.1| lysine--tRNA ligase [Escherichia coli PA9]
gi|390694517|gb|EIN69089.1| lysine--tRNA ligase [Escherichia coli PA10]
gi|390699339|gb|EIN73689.1| lysine--tRNA ligase [Escherichia coli PA14]
gi|390699673|gb|EIN74016.1| lysine--tRNA ligase [Escherichia coli PA15]
gi|390713357|gb|EIN86295.1| lysine--tRNA ligase [Escherichia coli PA22]
gi|390721121|gb|EIN93822.1| lysine--tRNA ligase [Escherichia coli PA25]
gi|390722492|gb|EIN95163.1| lysine--tRNA ligase [Escherichia coli PA24]
gi|390726018|gb|EIN98495.1| lysine--tRNA ligase [Escherichia coli PA28]
gi|390739929|gb|EIO11087.1| lysine--tRNA ligase [Escherichia coli PA31]
gi|390740668|gb|EIO11788.1| lysine--tRNA ligase [Escherichia coli PA32]
gi|390743909|gb|EIO14854.1| lysine--tRNA ligase [Escherichia coli PA33]
gi|390757267|gb|EIO26756.1| lysine--tRNA ligase [Escherichia coli PA40]
gi|390765520|gb|EIO34684.1| lysine--tRNA ligase [Escherichia coli PA39]
gi|390765569|gb|EIO34732.1| lysine--tRNA ligase [Escherichia coli PA41]
gi|390767374|gb|EIO36457.1| lysine--tRNA ligase [Escherichia coli PA42]
gi|390780051|gb|EIO47751.1| lysine--tRNA ligase [Escherichia coli TW06591]
gi|390788326|gb|EIO55795.1| lysine--tRNA ligase [Escherichia coli TW07945]
gi|390788620|gb|EIO56085.1| lysine--tRNA ligase [Escherichia coli TW10246]
gi|390795536|gb|EIO62820.1| lysine--tRNA ligase [Escherichia coli TW11039]
gi|390803529|gb|EIO70535.1| lysine--tRNA ligase [Escherichia coli TW09098]
gi|390806247|gb|EIO73169.1| lysine--tRNA ligase [Escherichia coli TW09109]
gi|390815111|gb|EIO81660.1| lysine--tRNA ligase [Escherichia coli TW10119]
gi|390824362|gb|EIO90343.1| lysine--tRNA ligase [Escherichia coli EC4203]
gi|390827091|gb|EIO92874.1| lysine--tRNA ligase [Escherichia coli TW09195]
gi|390829438|gb|EIO95039.1| lysine--tRNA ligase [Escherichia coli EC4196]
gi|390844305|gb|EIP08053.1| lysine--tRNA ligase [Escherichia coli TW14313]
gi|390844737|gb|EIP08436.1| lysine--tRNA ligase [Escherichia coli TW14301]
gi|390849573|gb|EIP12995.1| lysine--tRNA ligase [Escherichia coli EC4421]
gi|390859897|gb|EIP22225.1| lysine--tRNA ligase [Escherichia coli EC4422]
gi|390864532|gb|EIP26640.1| lysine--tRNA ligase [Escherichia coli EC4013]
gi|390868948|gb|EIP30656.1| lysine--tRNA ligase [Escherichia coli EC4402]
gi|390877167|gb|EIP38118.1| lysine--tRNA ligase [Escherichia coli EC4439]
gi|390882642|gb|EIP43143.1| lysine--tRNA ligase [Escherichia coli EC4436]
gi|390892456|gb|EIP52044.1| lysine--tRNA ligase [Escherichia coli EC4437]
gi|390894447|gb|EIP53964.1| lysine--tRNA ligase [Escherichia coli EC4448]
gi|390899156|gb|EIP58404.1| lysine--tRNA ligase [Escherichia coli EC1738]
gi|390906930|gb|EIP65799.1| lysine--tRNA ligase [Escherichia coli EC1734]
gi|390918000|gb|EIP76416.1| lysine--tRNA ligase [Escherichia coli EC1863]
gi|390919001|gb|EIP77375.1| lysine--tRNA ligase [Escherichia coli EC1845]
gi|408063394|gb|EKG97886.1| lysine--tRNA ligase [Escherichia coli PA7]
gi|408065824|gb|EKH00294.1| lysine--tRNA ligase [Escherichia coli FRIK920]
gi|408069023|gb|EKH03437.1| lysine--tRNA ligase [Escherichia coli PA34]
gi|408078286|gb|EKH12459.1| lysine--tRNA ligase [Escherichia coli FDA506]
gi|408081667|gb|EKH15674.1| lysine--tRNA ligase [Escherichia coli FDA507]
gi|408090347|gb|EKH23624.1| lysine--tRNA ligase [Escherichia coli FDA504]
gi|408096406|gb|EKH29346.1| lysine--tRNA ligase [Escherichia coli FRIK1999]
gi|408103171|gb|EKH35556.1| lysine--tRNA ligase [Escherichia coli FRIK1997]
gi|408107570|gb|EKH39646.1| lysine--tRNA ligase [Escherichia coli NE1487]
gi|408114298|gb|EKH45860.1| lysine--tRNA ligase [Escherichia coli NE037]
gi|408120036|gb|EKH51066.1| lysine--tRNA ligase [Escherichia coli FRIK2001]
gi|408126320|gb|EKH56880.1| lysine--tRNA ligase [Escherichia coli PA4]
gi|408136332|gb|EKH66079.1| lysine--tRNA ligase [Escherichia coli PA23]
gi|408138989|gb|EKH68623.1| lysine--tRNA ligase [Escherichia coli PA49]
gi|408145446|gb|EKH74624.1| lysine--tRNA ligase [Escherichia coli PA45]
gi|408154043|gb|EKH82413.1| lysine--tRNA ligase [Escherichia coli TT12B]
gi|408159005|gb|EKH87108.1| lysine--tRNA ligase [Escherichia coli MA6]
gi|408172080|gb|EKH99167.1| lysine--tRNA ligase [Escherichia coli CB7326]
gi|408178661|gb|EKI05358.1| lysine--tRNA ligase [Escherichia coli EC96038]
gi|408181826|gb|EKI08368.1| lysine--tRNA ligase [Escherichia coli 5412]
gi|408215663|gb|EKI40035.1| lysine--tRNA ligase [Escherichia coli PA38]
gi|408225725|gb|EKI49391.1| lysine--tRNA ligase [Escherichia coli EC1735]
gi|408237049|gb|EKI59916.1| lysine--tRNA ligase [Escherichia coli EC1736]
gi|408240502|gb|EKI63177.1| lysine--tRNA ligase [Escherichia coli EC1737]
gi|408245268|gb|EKI67660.1| lysine--tRNA ligase [Escherichia coli EC1846]
gi|408254004|gb|EKI75564.1| lysine--tRNA ligase [Escherichia coli EC1847]
gi|408257765|gb|EKI79062.1| lysine--tRNA ligase [Escherichia coli EC1848]
gi|408264308|gb|EKI85108.1| lysine--tRNA ligase [Escherichia coli EC1849]
gi|408273024|gb|EKI93090.1| lysine--tRNA ligase [Escherichia coli EC1850]
gi|408276253|gb|EKI96186.1| lysine--tRNA ligase [Escherichia coli EC1856]
gi|408284611|gb|EKJ03703.1| lysine--tRNA ligase [Escherichia coli EC1862]
gi|408290207|gb|EKJ08944.1| lysine--tRNA ligase [Escherichia coli EC1864]
gi|408306612|gb|EKJ23978.1| lysine--tRNA ligase [Escherichia coli EC1868]
gi|408307056|gb|EKJ24418.1| lysine--tRNA ligase [Escherichia coli EC1866]
gi|408317842|gb|EKJ34072.1| lysine--tRNA ligase [Escherichia coli EC1869]
gi|408323901|gb|EKJ39862.1| lysine--tRNA ligase [Escherichia coli EC1870]
gi|408325272|gb|EKJ41156.1| lysine--tRNA ligase [Escherichia coli NE098]
gi|408335656|gb|EKJ50494.1| lysine--tRNA ligase [Escherichia coli FRIK523]
gi|408345412|gb|EKJ59754.1| lysine--tRNA ligase [Escherichia coli 0.1304]
gi|408548172|gb|EKK25557.1| lysine--tRNA ligase [Escherichia coli 3.4870]
gi|408548396|gb|EKK25780.1| lysine--tRNA ligase [Escherichia coli 5.2239]
gi|408549646|gb|EKK27006.1| lysine--tRNA ligase [Escherichia coli 6.0172]
gi|408567269|gb|EKK43329.1| lysine--tRNA ligase [Escherichia coli 8.0586]
gi|408577622|gb|EKK53181.1| lysine--tRNA ligase [Escherichia coli 10.0833]
gi|408580392|gb|EKK55804.1| lysine--tRNA ligase [Escherichia coli 8.2524]
gi|408590266|gb|EKK64748.1| lysine--tRNA ligase [Escherichia coli 10.0869]
gi|408595511|gb|EKK69746.1| lysine--tRNA ligase [Escherichia coli 88.0221]
gi|408600274|gb|EKK74133.1| lysine--tRNA ligase [Escherichia coli 8.0416]
gi|408611722|gb|EKK85082.1| lysine--tRNA ligase [Escherichia coli 10.0821]
gi|427203435|gb|EKV73740.1| lysine--tRNA ligase [Escherichia coli 88.1042]
gi|427204570|gb|EKV74845.1| lysine--tRNA ligase [Escherichia coli 89.0511]
gi|427207162|gb|EKV77340.1| lysine--tRNA ligase [Escherichia coli 88.1467]
gi|427219632|gb|EKV88593.1| lysine--tRNA ligase [Escherichia coli 90.0091]
gi|427223185|gb|EKV91944.1| lysine--tRNA ligase [Escherichia coli 90.2281]
gi|427226121|gb|EKV94729.1| lysine--tRNA ligase [Escherichia coli 90.0039]
gi|427240565|gb|EKW08018.1| lysine--tRNA ligase [Escherichia coli 93.0056]
gi|427240669|gb|EKW08121.1| lysine--tRNA ligase [Escherichia coli 93.0055]
gi|427244446|gb|EKW11765.1| lysine--tRNA ligase [Escherichia coli 94.0618]
gi|427258806|gb|EKW24882.1| lysine--tRNA ligase [Escherichia coli 95.0183]
gi|427259888|gb|EKW25908.1| lysine--tRNA ligase [Escherichia coli 95.0943]
gi|427262802|gb|EKW28660.1| lysine--tRNA ligase [Escherichia coli 95.1288]
gi|427275495|gb|EKW40110.1| lysine--tRNA ligase [Escherichia coli 96.0428]
gi|427277815|gb|EKW42325.1| lysine--tRNA ligase [Escherichia coli 96.0427]
gi|427281998|gb|EKW46278.1| lysine--tRNA ligase [Escherichia coli 96.0939]
gi|427290484|gb|EKW53955.1| lysine--tRNA ligase [Escherichia coli 96.0932]
gi|427297846|gb|EKW60870.1| lysine--tRNA ligase [Escherichia coli 96.0107]
gi|427299369|gb|EKW62343.1| lysine--tRNA ligase [Escherichia coli 97.0003]
gi|427310811|gb|EKW73041.1| lysine--tRNA ligase [Escherichia coli 97.1742]
gi|427313687|gb|EKW75780.1| lysine--tRNA ligase [Escherichia coli 97.0007]
gi|427318016|gb|EKW79899.1| lysine--tRNA ligase [Escherichia coli 99.0672]
gi|427326750|gb|EKW88157.1| lysine--tRNA ligase [Escherichia coli 99.0678]
gi|427328246|gb|EKW89614.1| lysine--tRNA ligase [Escherichia coli 99.0713]
gi|429252373|gb|EKY36911.1| lysine--tRNA ligase [Escherichia coli 96.0109]
gi|429253931|gb|EKY38382.1| lysine--tRNA ligase [Escherichia coli 97.0010]
gi|444536854|gb|ELV16838.1| lysine--tRNA ligase [Escherichia coli 99.0814]
gi|444546669|gb|ELV25366.1| lysine--tRNA ligase [Escherichia coli 99.0815]
gi|444556428|gb|ELV33840.1| lysine--tRNA ligase [Escherichia coli 99.0839]
gi|444556690|gb|ELV34083.1| lysine--tRNA ligase [Escherichia coli 99.0816]
gi|444561853|gb|ELV38955.1| lysine--tRNA ligase [Escherichia coli 99.0848]
gi|444571418|gb|ELV47901.1| lysine--tRNA ligase [Escherichia coli 99.1753]
gi|444575146|gb|ELV51398.1| lysine--tRNA ligase [Escherichia coli 99.1775]
gi|444578113|gb|ELV54201.1| lysine--tRNA ligase [Escherichia coli 99.1793]
gi|444592165|gb|ELV67426.1| lysine--tRNA ligase [Escherichia coli PA11]
gi|444592461|gb|ELV67720.1| lysine--tRNA ligase [Escherichia coli ATCC 700728]
gi|444593215|gb|ELV68442.1| lysine--tRNA ligase [Escherichia coli 99.1805]
gi|444605367|gb|ELV80009.1| lysine--tRNA ligase [Escherichia coli PA13]
gi|444606150|gb|ELV80776.1| lysine--tRNA ligase [Escherichia coli PA19]
gi|444614723|gb|ELV88949.1| lysine--tRNA ligase [Escherichia coli PA2]
gi|444617905|gb|ELV92004.1| lysine--tRNA ligase [Escherichia coli PA47]
gi|444622639|gb|ELV96584.1| lysine--tRNA ligase [Escherichia coli PA48]
gi|444628839|gb|ELW02576.1| lysine--tRNA ligase [Escherichia coli PA8]
gi|444637404|gb|ELW10778.1| lysine--tRNA ligase [Escherichia coli 7.1982]
gi|444639896|gb|ELW13193.1| lysine--tRNA ligase [Escherichia coli 99.1781]
gi|444643964|gb|ELW17090.1| lysine--tRNA ligase [Escherichia coli 99.1762]
gi|444653656|gb|ELW26377.1| lysine--tRNA ligase [Escherichia coli PA35]
gi|444659028|gb|ELW31465.1| lysine--tRNA ligase [Escherichia coli 3.4880]
gi|444662197|gb|ELW34459.1| lysine--tRNA ligase [Escherichia coli 95.0083]
gi|444669150|gb|ELW41148.1| lysine--tRNA ligase [Escherichia coli 99.0670]
Length = 505
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 233/440 (52%), Positives = 313/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDILGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+S IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +G T
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y LDF K FEKLT+ EAIKKY P+ + DL N K+ ++ I + L
Sbjct: 310 EVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIVESIGIHVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q+ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFLDQVAAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|50119719|ref|YP_048886.1| lysyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
gi|81646128|sp|Q6D945.1|SYK_ERWCT RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|49610245|emb|CAG73688.1| lysyl tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
Length = 505
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 228/440 (51%), Positives = 315/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY+S + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVSRDDLAEGIYNEQFKKWDLGDILGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L++QE +YR RY+DLI N+++R F+ R+
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANDDSRNTFRIRSN 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
++++IR FM N FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 VMAAIRRFMVDNGFMEVETPMMQVIPGGASARPFITHHNALDIDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEG+SPRHNPEFTM+E Y AY +Y L+ TE + + + D +G+T
Sbjct: 250 GGFERVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYKDLIVLTENLFRTLTQDVLGST 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y + DF K F+KLT+ EAI KY P+ N DL + + + K + L
Sbjct: 310 TVVYGDQTFDFGKPFDKLTMREAICKYRPETNVADLDDLEKATAIALSLGIKIEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEET E+ L PT+IT YP E+SPLAR+ N +N+ IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEETAESSLIQPTFITEYPAEVSPLARR-NDQNSEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF Q++ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAERFAQQVNAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|429097785|ref|ZP_19159891.1| Lysyl-tRNA synthetase (class II) [Cronobacter dublinensis 582]
gi|426284125|emb|CCJ86004.1| Lysyl-tRNA synthetase (class II) [Cronobacter dublinensis 582]
Length = 505
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 230/440 (52%), Positives = 313/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDILGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLIANDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM FMEVETP++ PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAGIRQFMVGRGFMEVETPMMQVIPGGASARPFVTHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + + +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQEILGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y DF K FEKLT+ EAIKKY P+ + DL + K + I K + L
Sbjct: 310 QVPYGEETFDFGKPFEKLTMREAIKKYRPETDMADLDDFEKAKGIAQSIGIKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
L +I FEE E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RLVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF++Q+ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFQDQVAAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|419924125|ref|ZP_14442023.1| lysyl-tRNA synthetase [Escherichia coli 541-15]
gi|388391129|gb|EIL52603.1| lysyl-tRNA synthetase [Escherichia coli 541-15]
Length = 505
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 234/440 (53%), Positives = 313/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDILGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+S IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +G T
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y LDF K FEKLT+ EAIKKY P+ + DL N K+ + I+ + L
Sbjct: 310 EVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESISIHVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR+++I N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARRNDI-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q+ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFLDQVAAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|350560873|ref|ZP_08929712.1| lysyl-tRNA synthetase [Thioalkalivibrio thiocyanoxidans ARh 4]
gi|349780980|gb|EGZ35288.1| lysyl-tRNA synthetase [Thioalkalivibrio thiocyanoxidans ARh 4]
Length = 503
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 230/445 (51%), Positives = 315/445 (70%), Gaps = 22/445 (4%)
Query: 3 KRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
KRVMGK SF L+D SG IQL++ + + + Y FK +D+GD++GA+GTLFKT
Sbjct: 76 KRVMGKASFATLRDQSG-----DIQLFVQRDALPEGGYAAFKQWDLGDVLGARGTLFKTR 130
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
TGELSI+V L+L+TKSLRPLP KF LS+QE +YR RY+DLI + TR++F+ RT+II
Sbjct: 131 TGELSIRVQELRLLTKSLRPLPEKFHGLSDQETRYRQRYVDLITSPETRELFRTRTRIIE 190
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
IR + F+EVETP++ PGGA A+PF THHN+L M ++LRIAPELYLKRL++GGF
Sbjct: 191 YIRDYFTGEGFLEVETPMMQAIPGGATARPFTTHHNALGMDLYLRIAPELYLKRLVVGGF 250
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
K+FEIN+NFRNEG+S RHNPEFTM+EFY A+ + LM TE +++ + D +GTT+I
Sbjct: 251 EKVFEINRNFRNEGLSTRHNPEFTMLEFYEAFVTHHELMDRTEALMRGLCADVLGTTQIS 310
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKIN----PKFNQKKIL 298
YQG + DF+ F ++T+ +AI + DL+N ++ +++ P + K
Sbjct: 311 YQGEVHDFASPFARMTVRDAILAFNSDIPAGDLENAERMRMHCERLGIPLKPGYGLGK-- 368
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
L + +FE+T E KL +PT+IT YPTE+SPLAR+ N ++ +T+RFE F+ G E
Sbjct: 369 -------LWIEVFEKTVEAKLRHPTFITAYPTEVSPLARR-NDQDPFVTDRFEFFVGGRE 420
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSS-YYDTDYIHALEYGMPPASGCGIGVD 417
IANGFSELNDPE+Q+ RF+ Q+ K G+L + +YD DYI ALEYG+PP +G GIG+D
Sbjct: 421 IANGFSELNDPEDQAERFRTQVSEKE--AGDLEAMHYDADYIRALEYGLPPTAGEGIGID 478
Query: 418 RLIMLLTNSKNIRDVILFPHLRNEN 442
RL+MLLT++ +IRDV+LFPHLR E
Sbjct: 479 RLVMLLTDAPSIRDVLLFPHLRPET 503
>gi|419393006|ref|ZP_13933809.1| lysyl-tRNA synthetase [Escherichia coli DEC15A]
gi|378235974|gb|EHX96029.1| lysyl-tRNA synthetase [Escherichia coli DEC15A]
Length = 505
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 234/440 (53%), Positives = 312/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDILGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+S IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +G T
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y LDF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 EVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR+++I N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARRNDI-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q+ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFLDQVAAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|260857013|ref|YP_003230904.1| lysyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
gi|415786891|ref|ZP_11493773.1| lysyl-tRNA synthetase [Escherichia coli EPECa14]
gi|417296964|ref|ZP_12084211.1| lysine--tRNA ligase [Escherichia coli 900105 (10e)]
gi|419211299|ref|ZP_13754368.1| lysyl-tRNA synthetase [Escherichia coli DEC8C]
gi|419217176|ref|ZP_13760172.1| lysyl-tRNA synthetase [Escherichia coli DEC8D]
gi|419256447|ref|ZP_13798953.1| lysyl-tRNA synthetase [Escherichia coli DEC10A]
gi|419262749|ref|ZP_13805160.1| lysyl-tRNA synthetase [Escherichia coli DEC10B]
gi|419268507|ref|ZP_13810852.1| lysyl-tRNA synthetase [Escherichia coli DEC10C]
gi|419274195|ref|ZP_13816486.1| lysyl-tRNA synthetase [Escherichia coli DEC10D]
gi|419874167|ref|ZP_14396114.1| lysyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9534]
gi|419885194|ref|ZP_14405993.1| lysyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9545]
gi|419899099|ref|ZP_14418624.1| lysyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM9942]
gi|419910159|ref|ZP_14428686.1| lysyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10026]
gi|420112001|ref|ZP_14621813.1| lysyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9553]
gi|420112916|ref|ZP_14622692.1| lysyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10021]
gi|420122342|ref|ZP_14631329.1| lysyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10030]
gi|420129250|ref|ZP_14637787.1| lysyl-tRNA ligase [Escherichia coli O26:H11 str. CVM10224]
gi|420132432|ref|ZP_14640790.1| lysyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM9952]
gi|422010572|ref|ZP_16357530.1| lysyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9455]
gi|424748256|ref|ZP_18176403.1| lysyl-tRNA ligase [Escherichia coli O26:H11 str. CFSAN001629]
gi|424758196|ref|ZP_18185912.1| lysyl-tRNA ligase [Escherichia coli O111:H11 str. CFSAN001630]
gi|425381098|ref|ZP_18765106.1| lysine--tRNA ligase [Escherichia coli EC1865]
gi|257755662|dbj|BAI27164.1| lysine tRNA synthetase LysS, constitutive [Escherichia coli O26:H11
str. 11368]
gi|323154770|gb|EFZ40968.1| lysyl-tRNA synthetase [Escherichia coli EPECa14]
gi|378050494|gb|EHW12821.1| lysyl-tRNA synthetase [Escherichia coli DEC8C]
gi|378059765|gb|EHW21964.1| lysyl-tRNA synthetase [Escherichia coli DEC8D]
gi|378098684|gb|EHW60416.1| lysyl-tRNA synthetase [Escherichia coli DEC10A]
gi|378104711|gb|EHW66369.1| lysyl-tRNA synthetase [Escherichia coli DEC10B]
gi|378109013|gb|EHW70624.1| lysyl-tRNA synthetase [Escherichia coli DEC10C]
gi|378114901|gb|EHW76452.1| lysyl-tRNA synthetase [Escherichia coli DEC10D]
gi|386260408|gb|EIJ15882.1| lysine--tRNA ligase [Escherichia coli 900105 (10e)]
gi|388350979|gb|EIL16276.1| lysyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9545]
gi|388351320|gb|EIL16561.1| lysyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9534]
gi|388371994|gb|EIL35444.1| lysyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10026]
gi|388380436|gb|EIL43039.1| lysyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM9942]
gi|394383176|gb|EJE60782.1| lysyl-tRNA ligase [Escherichia coli O26:H11 str. CVM10224]
gi|394394119|gb|EJE70748.1| lysyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9455]
gi|394397436|gb|EJE73703.1| lysyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9553]
gi|394413442|gb|EJE87481.1| lysyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10021]
gi|394422308|gb|EJE95673.1| lysyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10030]
gi|394429595|gb|EJF02021.1| lysyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM9952]
gi|408295032|gb|EKJ13374.1| lysine--tRNA ligase [Escherichia coli EC1865]
gi|421944886|gb|EKU02125.1| lysyl-tRNA ligase [Escherichia coli O26:H11 str. CFSAN001629]
gi|421948709|gb|EKU05713.1| lysyl-tRNA ligase [Escherichia coli O111:H11 str. CFSAN001630]
Length = 505
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 234/440 (53%), Positives = 312/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDILGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+S IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +G T
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y LDF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 EVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR+++I N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARRNDI-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q+ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFLDQVAAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|336249135|ref|YP_004592845.1| lysyl-tRNA synthetase [Enterobacter aerogenes KCTC 2190]
gi|334735191|gb|AEG97566.1| lysyl-tRNA synthetase [Enterobacter aerogenes KCTC 2190]
Length = 505
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 228/440 (51%), Positives = 315/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDII A+G LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDIIAARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE++YR RY+DLI NE +R F+ R+Q
Sbjct: 130 KTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANEESRHTFRIRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++++R FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILATMRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + +G T
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQTVLGKT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y ++ DF K FEKLT+ EAIKK+ P+ N DL N K+ + I + + L
Sbjct: 310 EVPYGDQVFDFGKPFEKLTMREAIKKHRPETNMADLDNFDAAKALAESIGIQVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF++Q++ K + E + +YD DY+ ALEYG+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFQDQVNAKAAGDDE-AMFYDEDYVTALEYGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|429092252|ref|ZP_19154893.1| Lysyl-tRNA synthetase (class II) [Cronobacter dublinensis 1210]
gi|426743059|emb|CCJ81006.1| Lysyl-tRNA synthetase (class II) [Cronobacter dublinensis 1210]
Length = 505
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 230/440 (52%), Positives = 313/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDILGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLIANDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM FMEVETP++ PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAGIRQFMVGRGFMEVETPMMQVIPGGASARPFVTHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + + +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQEILGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y DF K FEKLT+ EAIKKY P+ + DL + K + I K + L
Sbjct: 310 QVPYGEETFDFGKPFEKLTMREAIKKYRPETDMADLDDFEKAKGIAQSIGIKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
L +I FEE E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RLVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF++Q+ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFQDQVAAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|24114145|ref|NP_708655.1| lysyl-tRNA synthetase [Shigella flexneri 2a str. 301]
gi|30064202|ref|NP_838373.1| lysyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
gi|74313449|ref|YP_311868.1| lysyl-tRNA synthetase [Shigella sonnei Ss046]
gi|110806794|ref|YP_690314.1| lysyl-tRNA synthetase [Shigella flexneri 5 str. 8401]
gi|157155962|ref|YP_001464228.1| lysyl-tRNA synthetase [Escherichia coli E24377A]
gi|187730899|ref|YP_001881660.1| lysyl-tRNA synthetase [Shigella boydii CDC 3083-94]
gi|191165971|ref|ZP_03027807.1| lysyl-tRNA synthetase LysS [Escherichia coli B7A]
gi|193070569|ref|ZP_03051508.1| lysyl-tRNA synthetase LysS [Escherichia coli E110019]
gi|194426362|ref|ZP_03058917.1| lysyl-tRNA synthetase LysS [Escherichia coli B171]
gi|218555438|ref|YP_002388351.1| lysyl-tRNA synthetase [Escherichia coli IAI1]
gi|218696485|ref|YP_002404152.1| lysyl-tRNA synthetase [Escherichia coli 55989]
gi|260845558|ref|YP_003223336.1| lysine tRNA synthetase LysS, constitutive [Escherichia coli O103:H2
str. 12009]
gi|260869567|ref|YP_003235969.1| lysine tRNA synthetase LysS, constitutive [Escherichia coli O111:H-
str. 11128]
gi|293449212|ref|ZP_06663633.1| lysyl-tRNA synthetase [Escherichia coli B088]
gi|300815659|ref|ZP_07095883.1| lysyl-tRNA synthetase [Escherichia coli MS 107-1]
gi|300820693|ref|ZP_07100844.1| lysyl-tRNA synthetase [Escherichia coli MS 119-7]
gi|300906561|ref|ZP_07124252.1| lysyl-tRNA synthetase [Escherichia coli MS 84-1]
gi|301303047|ref|ZP_07209174.1| lysyl-tRNA synthetase [Escherichia coli MS 124-1]
gi|301327290|ref|ZP_07220546.1| lysyl-tRNA synthetase [Escherichia coli MS 78-1]
gi|307310491|ref|ZP_07590139.1| lysyl-tRNA synthetase [Escherichia coli W]
gi|309793961|ref|ZP_07688386.1| lysyl-tRNA synthetase [Escherichia coli MS 145-7]
gi|331654387|ref|ZP_08355387.1| lysine--tRNA ligase [Escherichia coli M718]
gi|331669624|ref|ZP_08370470.1| lysine--tRNA ligase [Escherichia coli TA271]
gi|331678876|ref|ZP_08379550.1| lysine--tRNA ligase [Escherichia coli H591]
gi|332280426|ref|ZP_08392839.1| lysyl-tRNA synthetase [Shigella sp. D9]
gi|378711661|ref|YP_005276554.1| lysyl-tRNA synthetase [Escherichia coli KO11FL]
gi|383180049|ref|YP_005458054.1| lysyl-tRNA synthetase [Shigella sonnei 53G]
gi|384544436|ref|YP_005728499.1| lysyl-tRNA synthetase [Shigella flexneri 2002017]
gi|386610277|ref|YP_006125763.1| lysine tRNA synthetase, constitutive [Escherichia coli W]
gi|386700159|ref|YP_006163996.1| lysyl-tRNA synthetase [Escherichia coli KO11FL]
gi|386710784|ref|YP_006174505.1| lysyl-tRNA synthetase [Escherichia coli W]
gi|407470764|ref|YP_006782793.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. 2009EL-2071]
gi|407480574|ref|YP_006777723.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. 2011C-3493]
gi|410481140|ref|YP_006768686.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. 2009EL-2050]
gi|414577649|ref|ZP_11434824.1| lysyl-tRNA synthetase [Shigella sonnei 3233-85]
gi|415796475|ref|ZP_11497611.1| lysyl-tRNA synthetase [Escherichia coli E128010]
gi|415811512|ref|ZP_11503862.1| lysyl-tRNA synthetase [Escherichia coli LT-68]
gi|415818587|ref|ZP_11508309.1| lysyl-tRNA synthetase [Escherichia coli OK1180]
gi|415830344|ref|ZP_11516246.1| lysyl-tRNA synthetase [Escherichia coli OK1357]
gi|415845564|ref|ZP_11525073.1| lysyl-tRNA synthetase [Shigella sonnei 53G]
gi|415857876|ref|ZP_11532488.1| lysyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
gi|415862133|ref|ZP_11535665.1| lysyl-tRNA synthetase [Escherichia coli MS 85-1]
gi|415874203|ref|ZP_11541300.1| lysine--tRNA ligase [Escherichia coli MS 79-10]
gi|416265709|ref|ZP_11641399.1| lysyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112]
gi|416300673|ref|ZP_11652790.1| lysyl-tRNA synthetase [Shigella flexneri CDC 796-83]
gi|416340312|ref|ZP_11675327.1| lysyl-tRNA synthetase [Escherichia coli EC4100B]
gi|417123355|ref|ZP_11972265.1| lysine--tRNA ligase [Escherichia coli 97.0246]
gi|417134241|ref|ZP_11979026.1| lysine--tRNA ligase [Escherichia coli 5.0588]
gi|417150916|ref|ZP_11990655.1| lysine--tRNA ligase [Escherichia coli 1.2264]
gi|417162897|ref|ZP_11998227.1| lysine--tRNA ligase [Escherichia coli 99.0741]
gi|417173867|ref|ZP_12003663.1| lysine--tRNA ligase [Escherichia coli 3.2608]
gi|417200138|ref|ZP_12017375.1| lysine--tRNA ligase [Escherichia coli 4.0522]
gi|417211477|ref|ZP_12021776.1| lysine--tRNA ligase [Escherichia coli JB1-95]
gi|417223020|ref|ZP_12026460.1| lysine--tRNA ligase [Escherichia coli 96.154]
gi|417229140|ref|ZP_12030898.1| lysine--tRNA ligase [Escherichia coli 5.0959]
gi|417237057|ref|ZP_12035024.1| lysine--tRNA ligase [Escherichia coli 9.0111]
gi|417251962|ref|ZP_12043727.1| lysine--tRNA ligase [Escherichia coli 4.0967]
gi|417268653|ref|ZP_12056013.1| lysine--tRNA ligase [Escherichia coli 3.3884]
gi|417593236|ref|ZP_12243929.1| lysyl-tRNA synthetase [Escherichia coli 2534-86]
gi|417603580|ref|ZP_12254147.1| lysyl-tRNA synthetase [Escherichia coli STEC_94C]
gi|417609504|ref|ZP_12260004.1| lysyl-tRNA synthetase [Escherichia coli STEC_DG131-3]
gi|417624892|ref|ZP_12275187.1| lysyl-tRNA synthetase [Escherichia coli STEC_H.1.8]
gi|417640694|ref|ZP_12290832.1| lysyl-tRNA synthetase [Escherichia coli TX1999]
gi|417668290|ref|ZP_12317832.1| lysyl-tRNA synthetase [Escherichia coli STEC_O31]
gi|417703890|ref|ZP_12352994.1| lysyl-tRNA synthetase [Shigella flexneri K-218]
gi|417708991|ref|ZP_12358019.1| lysyl-tRNA synthetase [Shigella flexneri VA-6]
gi|417713909|ref|ZP_12362871.1| lysyl-tRNA synthetase [Shigella flexneri K-272]
gi|417718924|ref|ZP_12367816.1| lysyl-tRNA synthetase [Shigella flexneri K-227]
gi|417724625|ref|ZP_12373423.1| lysyl-tRNA synthetase [Shigella flexneri K-304]
gi|417729772|ref|ZP_12378465.1| lysyl-tRNA synthetase [Shigella flexneri K-671]
gi|417734873|ref|ZP_12383520.1| lysyl-tRNA synthetase [Shigella flexneri 2747-71]
gi|417739742|ref|ZP_12388316.1| lysyl-tRNA synthetase [Shigella flexneri 4343-70]
gi|417744718|ref|ZP_12393242.1| lysyl-tRNA synthetase [Shigella flexneri 2930-71]
gi|417806421|ref|ZP_12453364.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. LB226692]
gi|417829343|ref|ZP_12475888.1| lysyl-tRNA synthetase [Shigella flexneri J1713]
gi|417834175|ref|ZP_12480621.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. 01-09591]
gi|417867357|ref|ZP_12512394.1| hypothetical protein C22711_4284 [Escherichia coli O104:H4 str.
C227-11]
gi|418041244|ref|ZP_12679470.1| lysyl-tRNA synthetase [Escherichia coli W26]
gi|418258127|ref|ZP_12881528.1| lysyl-tRNA synthetase [Shigella flexneri 6603-63]
gi|418268199|ref|ZP_12886998.1| lysyl-tRNA synthetase [Shigella sonnei str. Moseley]
gi|418942094|ref|ZP_13495391.1| lysyl-tRNA synthetase [Escherichia coli O157:H43 str. T22]
gi|419171689|ref|ZP_13715570.1| lysyl-tRNA synthetase [Escherichia coli DEC7A]
gi|419182246|ref|ZP_13725857.1| lysyl-tRNA synthetase [Escherichia coli DEC7C]
gi|419187872|ref|ZP_13731379.1| lysyl-tRNA synthetase [Escherichia coli DEC7D]
gi|419192991|ref|ZP_13736440.1| lysyl-tRNA synthetase [Escherichia coli DEC7E]
gi|419198522|ref|ZP_13741819.1| lysyl-tRNA synthetase [Escherichia coli DEC8A]
gi|419204946|ref|ZP_13748119.1| lysyl-tRNA synthetase [Escherichia coli DEC8B]
gi|419222915|ref|ZP_13765831.1| lysyl-tRNA synthetase [Escherichia coli DEC8E]
gi|419228329|ref|ZP_13771176.1| lysyl-tRNA synthetase [Escherichia coli DEC9A]
gi|419233882|ref|ZP_13776654.1| lysyl-tRNA synthetase [Escherichia coli DEC9B]
gi|419239317|ref|ZP_13782028.1| lysyl-tRNA synthetase [Escherichia coli DEC9C]
gi|419244836|ref|ZP_13787471.1| lysyl-tRNA synthetase [Escherichia coli DEC9D]
gi|419250651|ref|ZP_13793223.1| lysyl-tRNA synthetase [Escherichia coli DEC9E]
gi|419279412|ref|ZP_13821656.1| lysyl-tRNA synthetase [Escherichia coli DEC10E]
gi|419285590|ref|ZP_13827759.1| lysyl-tRNA synthetase [Escherichia coli DEC10F]
gi|419290938|ref|ZP_13833026.1| lysyl-tRNA synthetase [Escherichia coli DEC11A]
gi|419296222|ref|ZP_13838264.1| lysyl-tRNA synthetase [Escherichia coli DEC11B]
gi|419301687|ref|ZP_13843684.1| lysyl-tRNA synthetase [Escherichia coli DEC11C]
gi|419307816|ref|ZP_13849713.1| lysyl-tRNA synthetase [Escherichia coli DEC11D]
gi|419312820|ref|ZP_13854680.1| lysyl-tRNA synthetase [Escherichia coli DEC11E]
gi|419318212|ref|ZP_13860013.1| lysyl-tRNA synthetase [Escherichia coli DEC12A]
gi|419324504|ref|ZP_13866194.1| lysyl-tRNA synthetase [Escherichia coli DEC12B]
gi|419330482|ref|ZP_13872081.1| lysyl-tRNA synthetase [Escherichia coli DEC12C]
gi|419335990|ref|ZP_13877511.1| lysyl-tRNA synthetase [Escherichia coli DEC12D]
gi|419341351|ref|ZP_13882812.1| lysyl-tRNA synthetase [Escherichia coli DEC12E]
gi|419346567|ref|ZP_13887938.1| lysyl-tRNA synthetase [Escherichia coli DEC13A]
gi|419351030|ref|ZP_13892363.1| lysyl-tRNA synthetase [Escherichia coli DEC13B]
gi|419356435|ref|ZP_13897687.1| lysyl-tRNA synthetase [Escherichia coli DEC13C]
gi|419361504|ref|ZP_13902717.1| lysyl-tRNA synthetase [Escherichia coli DEC13D]
gi|419366611|ref|ZP_13907767.1| lysyl-tRNA synthetase [Escherichia coli DEC13E]
gi|419371372|ref|ZP_13912485.1| lysyl-tRNA synthetase [Escherichia coli DEC14A]
gi|419376877|ref|ZP_13917900.1| lysyl-tRNA synthetase [Escherichia coli DEC14B]
gi|419382184|ref|ZP_13923130.1| lysyl-tRNA synthetase [Escherichia coli DEC14C]
gi|419387522|ref|ZP_13928394.1| lysyl-tRNA synthetase [Escherichia coli DEC14D]
gi|419397991|ref|ZP_13938759.1| lysyl-tRNA synthetase [Escherichia coli DEC15B]
gi|419403395|ref|ZP_13944115.1| lysyl-tRNA synthetase [Escherichia coli DEC15C]
gi|419408554|ref|ZP_13949240.1| lysyl-tRNA synthetase [Escherichia coli DEC15D]
gi|419414067|ref|ZP_13954711.1| lysyl-tRNA synthetase [Escherichia coli DEC15E]
gi|419807368|ref|ZP_14332428.1| lysyl-tRNA synthetase [Escherichia coli AI27]
gi|419861958|ref|ZP_14384575.1| lysyl-tRNA synthetase [Escherichia coli O103:H25 str. CVM9340]
gi|419867754|ref|ZP_14390069.1| lysyl-tRNA synthetase [Escherichia coli O103:H2 str. CVM9450]
gi|419886400|ref|ZP_14407041.1| lysyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9570]
gi|419892795|ref|ZP_14412802.1| lysyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9574]
gi|419927308|ref|ZP_14445046.1| lysyl-tRNA synthetase [Escherichia coli 541-1]
gi|419948276|ref|ZP_14464575.1| lysyl-tRNA synthetase [Escherichia coli CUMT8]
gi|420090030|ref|ZP_14601807.1| lysyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9602]
gi|420094382|ref|ZP_14605973.1| lysyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9634]
gi|420321828|ref|ZP_14823652.1| lysyl-tRNA synthetase [Shigella flexneri 2850-71]
gi|420327291|ref|ZP_14829036.1| lysyl-tRNA synthetase [Shigella flexneri CCH060]
gi|420332746|ref|ZP_14834395.1| lysyl-tRNA synthetase [Shigella flexneri K-1770]
gi|420337537|ref|ZP_14839099.1| lysyl-tRNA synthetase [Shigella flexneri K-315]
gi|420343226|ref|ZP_14844692.1| lysyl-tRNA synthetase [Shigella flexneri K-404]
gi|420354358|ref|ZP_14855444.1| lysyl-tRNA synthetase [Shigella boydii 4444-74]
gi|420360204|ref|ZP_14861162.1| lysyl-tRNA synthetase [Shigella sonnei 3226-85]
gi|420364793|ref|ZP_14865665.1| lysyl-tRNA synthetase [Shigella sonnei 4822-66]
gi|420375077|ref|ZP_14874985.1| lysyl-tRNA synthetase [Shigella flexneri 1235-66]
gi|420382190|ref|ZP_14881629.1| lysyl-tRNA synthetase [Shigella dysenteriae 225-75]
gi|420387019|ref|ZP_14886363.1| lysyl-tRNA synthetase [Escherichia coli EPECa12]
gi|420392904|ref|ZP_14892152.1| lysyl-tRNA synthetase [Escherichia coli EPEC C342-62]
gi|421683998|ref|ZP_16123787.1| lysyl-tRNA synthetase [Shigella flexneri 1485-80]
gi|422760346|ref|ZP_16814106.1| lysyl-tRNA synthetase [Escherichia coli E1167]
gi|422775890|ref|ZP_16829545.1| lysyl-tRNA synthetase [Escherichia coli H120]
gi|422834155|ref|ZP_16882218.1| lysyl-tRNA synthetase [Escherichia coli E101]
gi|422989002|ref|ZP_16979775.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. C227-11]
gi|422995894|ref|ZP_16986658.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. C236-11]
gi|423001039|ref|ZP_16991793.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. 09-7901]
gi|423004707|ref|ZP_16995453.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. 04-8351]
gi|423011211|ref|ZP_17001945.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-3677]
gi|423020439|ref|ZP_17011148.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4404]
gi|423025605|ref|ZP_17016302.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4522]
gi|423031426|ref|ZP_17022113.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4623]
gi|423039251|ref|ZP_17029925.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C1]
gi|423044371|ref|ZP_17035038.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C2]
gi|423046100|ref|ZP_17036760.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C3]
gi|423054638|ref|ZP_17043445.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C4]
gi|423061613|ref|ZP_17050409.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C5]
gi|423707049|ref|ZP_17681432.1| lysyl-tRNA synthetase [Escherichia coli B799]
gi|424773849|ref|ZP_18200900.1| lysyl-tRNA synthetase [Escherichia coli O111:H8 str. CFSAN001632]
gi|424839180|ref|ZP_18263817.1| lysyl-tRNA synthetase [Shigella flexneri 5a str. M90T]
gi|427806066|ref|ZP_18973133.1| lysine tRNA synthetase, constitutive; suppressor of ColE1 mutation
in primer RNA [Escherichia coli chi7122]
gi|427810659|ref|ZP_18977724.1| lysine tRNA synthetase, constitutive; suppressor of ColE1 mutation
in primer RNA [Escherichia coli]
gi|429720470|ref|ZP_19255395.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-9450]
gi|429772368|ref|ZP_19304388.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02030]
gi|429777315|ref|ZP_19309289.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02033-1]
gi|429786040|ref|ZP_19317935.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02092]
gi|429791930|ref|ZP_19323784.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02093]
gi|429792779|ref|ZP_19324627.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02281]
gi|429799354|ref|ZP_19331152.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02318]
gi|429802971|ref|ZP_19334731.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02913]
gi|429812767|ref|ZP_19344450.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-03439]
gi|429813315|ref|ZP_19344994.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-04080]
gi|429818523|ref|ZP_19350157.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-03943]
gi|429904874|ref|ZP_19370853.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-9990]
gi|429909010|ref|ZP_19374974.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-9941]
gi|429914884|ref|ZP_19380831.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4984]
gi|429919914|ref|ZP_19385845.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-5604]
gi|429925734|ref|ZP_19391647.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4986]
gi|429929670|ref|ZP_19395572.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4987]
gi|429936209|ref|ZP_19402095.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4988]
gi|429941889|ref|ZP_19407763.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-5603]
gi|429944570|ref|ZP_19410432.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-6006]
gi|429952128|ref|ZP_19417974.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec12-0465]
gi|429955477|ref|ZP_19421309.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec12-0466]
gi|432378070|ref|ZP_19621056.1| lysyl-tRNA synthetase [Escherichia coli KTE12]
gi|432482210|ref|ZP_19724161.1| lysyl-tRNA synthetase [Escherichia coli KTE210]
gi|432527681|ref|ZP_19764765.1| lysyl-tRNA synthetase [Escherichia coli KTE233]
gi|432675996|ref|ZP_19911450.1| lysyl-tRNA synthetase [Escherichia coli KTE142]
gi|432751358|ref|ZP_19985941.1| lysyl-tRNA synthetase [Escherichia coli KTE29]
gi|432766249|ref|ZP_20000666.1| lysyl-tRNA synthetase [Escherichia coli KTE48]
gi|432807064|ref|ZP_20040979.1| lysyl-tRNA synthetase [Escherichia coli KTE91]
gi|432810582|ref|ZP_20044460.1| lysyl-tRNA synthetase [Escherichia coli KTE101]
gi|432828520|ref|ZP_20062138.1| lysyl-tRNA synthetase [Escherichia coli KTE135]
gi|432835826|ref|ZP_20069360.1| lysyl-tRNA synthetase [Escherichia coli KTE136]
gi|432935857|ref|ZP_20135125.1| lysyl-tRNA synthetase [Escherichia coli KTE184]
gi|432968953|ref|ZP_20157865.1| lysyl-tRNA synthetase [Escherichia coli KTE203]
gi|433093272|ref|ZP_20279530.1| lysyl-tRNA synthetase [Escherichia coli KTE138]
gi|433131425|ref|ZP_20316856.1| lysyl-tRNA synthetase [Escherichia coli KTE163]
gi|433136087|ref|ZP_20321424.1| lysyl-tRNA synthetase [Escherichia coli KTE166]
gi|433194931|ref|ZP_20378912.1| lysyl-tRNA synthetase [Escherichia coli KTE90]
gi|443618940|ref|YP_007382796.1| lysyl-tRNA synthetase [Escherichia coli APEC O78]
gi|39932371|sp|Q83JU6.3|SYK1_SHIFL RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|123047932|sp|Q0T106.1|SYK_SHIF8 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|238691768|sp|B2U0Q7.1|SYK_SHIB3 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|24053284|gb|AAN44362.1| lysine tRNA synthetase [Shigella flexneri 2a str. 301]
gi|30042459|gb|AAP18183.1| lysine tRNA synthetase [Shigella flexneri 2a str. 2457T]
gi|73856926|gb|AAZ89633.1| lysine tRNA synthetase, constitutive [Shigella sonnei Ss046]
gi|110616342|gb|ABF05009.1| lysine tRNA synthetase [Shigella flexneri 5 str. 8401]
gi|157077992|gb|ABV17700.1| lysyl-tRNA synthetase [Escherichia coli E24377A]
gi|187427891|gb|ACD07165.1| lysyl-tRNA synthetase LysS [Shigella boydii CDC 3083-94]
gi|190903919|gb|EDV63632.1| lysyl-tRNA synthetase LysS [Escherichia coli B7A]
gi|192956152|gb|EDV86616.1| lysyl-tRNA synthetase LysS [Escherichia coli E110019]
gi|194415670|gb|EDX31937.1| lysyl-tRNA synthetase LysS [Escherichia coli B171]
gi|218353217|emb|CAU99132.1| lysine tRNA synthetase, constitutive [Escherichia coli 55989]
gi|218362206|emb|CAQ99824.1| lysine tRNA synthetase, constitutive [Escherichia coli IAI1]
gi|257760705|dbj|BAI32202.1| lysine tRNA synthetase LysS, constitutive [Escherichia coli O103:H2
str. 12009]
gi|257765923|dbj|BAI37418.1| lysine tRNA synthetase LysS, constitutive [Escherichia coli O111:H-
str. 11128]
gi|281602222|gb|ADA75206.1| Lysyl-tRNA synthetase [Shigella flexneri 2002017]
gi|291322302|gb|EFE61731.1| lysyl-tRNA synthetase [Escherichia coli B088]
gi|300401600|gb|EFJ85138.1| lysyl-tRNA synthetase [Escherichia coli MS 84-1]
gi|300526957|gb|EFK48026.1| lysyl-tRNA synthetase [Escherichia coli MS 119-7]
gi|300531588|gb|EFK52650.1| lysyl-tRNA synthetase [Escherichia coli MS 107-1]
gi|300841711|gb|EFK69471.1| lysyl-tRNA synthetase [Escherichia coli MS 124-1]
gi|300846153|gb|EFK73913.1| lysyl-tRNA synthetase [Escherichia coli MS 78-1]
gi|306909386|gb|EFN39881.1| lysyl-tRNA synthetase [Escherichia coli W]
gi|308122368|gb|EFO59630.1| lysyl-tRNA synthetase [Escherichia coli MS 145-7]
gi|313647929|gb|EFS12375.1| lysyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
gi|315062194|gb|ADT76521.1| lysine tRNA synthetase, constitutive [Escherichia coli W]
gi|315256772|gb|EFU36740.1| lysyl-tRNA synthetase [Escherichia coli MS 85-1]
gi|320175923|gb|EFW51001.1| lysyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112]
gi|320184567|gb|EFW59368.1| lysyl-tRNA synthetase [Shigella flexneri CDC 796-83]
gi|320202549|gb|EFW77119.1| lysyl-tRNA synthetase [Escherichia coli EC4100B]
gi|323162520|gb|EFZ48370.1| lysyl-tRNA synthetase [Escherichia coli E128010]
gi|323167905|gb|EFZ53595.1| lysyl-tRNA synthetase [Shigella sonnei 53G]
gi|323173887|gb|EFZ59516.1| lysyl-tRNA synthetase [Escherichia coli LT-68]
gi|323180333|gb|EFZ65885.1| lysyl-tRNA synthetase [Escherichia coli OK1180]
gi|323183443|gb|EFZ68840.1| lysyl-tRNA synthetase [Escherichia coli OK1357]
gi|323377222|gb|ADX49490.1| lysyl-tRNA synthetase [Escherichia coli KO11FL]
gi|323946625|gb|EGB42648.1| lysyl-tRNA synthetase [Escherichia coli H120]
gi|324119930|gb|EGC13809.1| lysyl-tRNA synthetase [Escherichia coli E1167]
gi|331047769|gb|EGI19846.1| lysine--tRNA ligase [Escherichia coli M718]
gi|331063292|gb|EGI35205.1| lysine--tRNA ligase [Escherichia coli TA271]
gi|331073706|gb|EGI45027.1| lysine--tRNA ligase [Escherichia coli H591]
gi|332102778|gb|EGJ06124.1| lysyl-tRNA synthetase [Shigella sp. D9]
gi|332752926|gb|EGJ83310.1| lysyl-tRNA synthetase [Shigella flexneri 4343-70]
gi|332753725|gb|EGJ84104.1| lysyl-tRNA synthetase [Shigella flexneri K-671]
gi|332754304|gb|EGJ84670.1| lysyl-tRNA synthetase [Shigella flexneri 2747-71]
gi|332765820|gb|EGJ96033.1| lysyl-tRNA synthetase [Shigella flexneri 2930-71]
gi|332999678|gb|EGK19263.1| lysyl-tRNA synthetase [Shigella flexneri VA-6]
gi|333000273|gb|EGK19856.1| lysyl-tRNA synthetase [Shigella flexneri K-218]
gi|333000724|gb|EGK20299.1| lysyl-tRNA synthetase [Shigella flexneri K-272]
gi|333015180|gb|EGK34523.1| lysyl-tRNA synthetase [Shigella flexneri K-304]
gi|333015220|gb|EGK34562.1| lysyl-tRNA synthetase [Shigella flexneri K-227]
gi|335573740|gb|EGM60078.1| lysyl-tRNA synthetase [Shigella flexneri J1713]
gi|340733171|gb|EGR62303.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. 01-09591]
gi|340739020|gb|EGR73258.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. LB226692]
gi|341920646|gb|EGT70252.1| hypothetical protein C22711_4284 [Escherichia coli O104:H4 str.
C227-11]
gi|342930321|gb|EGU99043.1| lysine--tRNA ligase [Escherichia coli MS 79-10]
gi|345335328|gb|EGW67767.1| lysyl-tRNA synthetase [Escherichia coli 2534-86]
gi|345349102|gb|EGW81393.1| lysyl-tRNA synthetase [Escherichia coli STEC_94C]
gi|345356715|gb|EGW88916.1| lysyl-tRNA synthetase [Escherichia coli STEC_DG131-3]
gi|345375978|gb|EGX07924.1| lysyl-tRNA synthetase [Escherichia coli STEC_H.1.8]
gi|345392477|gb|EGX22258.1| lysyl-tRNA synthetase [Escherichia coli TX1999]
gi|354862729|gb|EHF23167.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. C236-11]
gi|354868013|gb|EHF28435.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. C227-11]
gi|354868407|gb|EHF28825.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. 04-8351]
gi|354874010|gb|EHF34387.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. 09-7901]
gi|354880694|gb|EHF41030.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-3677]
gi|354887848|gb|EHF48113.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4404]
gi|354892436|gb|EHF52645.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4522]
gi|354893642|gb|EHF53845.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C1]
gi|354896445|gb|EHF56616.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4623]
gi|354897822|gb|EHF57979.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C2]
gi|354911674|gb|EHF71678.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C5]
gi|354913623|gb|EHF73613.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C3]
gi|354916580|gb|EHF76552.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C4]
gi|371602690|gb|EHN91378.1| lysyl-tRNA synthetase [Escherichia coli E101]
gi|375322595|gb|EHS68343.1| lysyl-tRNA synthetase [Escherichia coli O157:H43 str. T22]
gi|378013476|gb|EHV76393.1| lysyl-tRNA synthetase [Escherichia coli DEC7A]
gi|378022366|gb|EHV85053.1| lysyl-tRNA synthetase [Escherichia coli DEC7C]
gi|378025621|gb|EHV88261.1| lysyl-tRNA synthetase [Escherichia coli DEC7D]
gi|378036838|gb|EHV99374.1| lysyl-tRNA synthetase [Escherichia coli DEC7E]
gi|378045067|gb|EHW07473.1| lysyl-tRNA synthetase [Escherichia coli DEC8A]
gi|378046141|gb|EHW08521.1| lysyl-tRNA synthetase [Escherichia coli DEC8B]
gi|378063724|gb|EHW25888.1| lysyl-tRNA synthetase [Escherichia coli DEC8E]
gi|378071574|gb|EHW33643.1| lysyl-tRNA synthetase [Escherichia coli DEC9A]
gi|378075689|gb|EHW37703.1| lysyl-tRNA synthetase [Escherichia coli DEC9B]
gi|378082511|gb|EHW44456.1| lysyl-tRNA synthetase [Escherichia coli DEC9C]
gi|378088798|gb|EHW50648.1| lysyl-tRNA synthetase [Escherichia coli DEC9D]
gi|378092520|gb|EHW54342.1| lysyl-tRNA synthetase [Escherichia coli DEC9E]
gi|378126691|gb|EHW88085.1| lysyl-tRNA synthetase [Escherichia coli DEC10E]
gi|378127950|gb|EHW89336.1| lysyl-tRNA synthetase [Escherichia coli DEC11A]
gi|378129620|gb|EHW90991.1| lysyl-tRNA synthetase [Escherichia coli DEC10F]
gi|378140290|gb|EHX01518.1| lysyl-tRNA synthetase [Escherichia coli DEC11B]
gi|378146743|gb|EHX07893.1| lysyl-tRNA synthetase [Escherichia coli DEC11D]
gi|378149286|gb|EHX10413.1| lysyl-tRNA synthetase [Escherichia coli DEC11C]
gi|378156897|gb|EHX17943.1| lysyl-tRNA synthetase [Escherichia coli DEC11E]
gi|378163719|gb|EHX24671.1| lysyl-tRNA synthetase [Escherichia coli DEC12B]
gi|378168009|gb|EHX28920.1| lysyl-tRNA synthetase [Escherichia coli DEC12A]
gi|378168175|gb|EHX29084.1| lysyl-tRNA synthetase [Escherichia coli DEC12C]
gi|378180393|gb|EHX41080.1| lysyl-tRNA synthetase [Escherichia coli DEC12D]
gi|378184514|gb|EHX45150.1| lysyl-tRNA synthetase [Escherichia coli DEC13A]
gi|378185900|gb|EHX46524.1| lysyl-tRNA synthetase [Escherichia coli DEC12E]
gi|378198260|gb|EHX58731.1| lysyl-tRNA synthetase [Escherichia coli DEC13C]
gi|378198617|gb|EHX59087.1| lysyl-tRNA synthetase [Escherichia coli DEC13B]
gi|378201707|gb|EHX62150.1| lysyl-tRNA synthetase [Escherichia coli DEC13D]
gi|378211602|gb|EHX71940.1| lysyl-tRNA synthetase [Escherichia coli DEC13E]
gi|378215509|gb|EHX75806.1| lysyl-tRNA synthetase [Escherichia coli DEC14A]
gi|378218424|gb|EHX78696.1| lysyl-tRNA synthetase [Escherichia coli DEC14B]
gi|378226680|gb|EHX86866.1| lysyl-tRNA synthetase [Escherichia coli DEC14C]
gi|378229907|gb|EHX90038.1| lysyl-tRNA synthetase [Escherichia coli DEC14D]
gi|378244112|gb|EHY04058.1| lysyl-tRNA synthetase [Escherichia coli DEC15B]
gi|378245650|gb|EHY05587.1| lysyl-tRNA synthetase [Escherichia coli DEC15C]
gi|378253115|gb|EHY12993.1| lysyl-tRNA synthetase [Escherichia coli DEC15D]
gi|378258277|gb|EHY18102.1| lysyl-tRNA synthetase [Escherichia coli DEC15E]
gi|383391686|gb|AFH16644.1| lysyl-tRNA synthetase [Escherichia coli KO11FL]
gi|383406476|gb|AFH12719.1| lysyl-tRNA synthetase [Escherichia coli W]
gi|383468232|gb|EID63253.1| lysyl-tRNA synthetase [Shigella flexneri 5a str. M90T]
gi|383475938|gb|EID67891.1| lysyl-tRNA synthetase [Escherichia coli W26]
gi|384469630|gb|EIE53781.1| lysyl-tRNA synthetase [Escherichia coli AI27]
gi|385710904|gb|EIG47879.1| lysyl-tRNA synthetase [Escherichia coli B799]
gi|386146746|gb|EIG93191.1| lysine--tRNA ligase [Escherichia coli 97.0246]
gi|386152095|gb|EIH03384.1| lysine--tRNA ligase [Escherichia coli 5.0588]
gi|386160410|gb|EIH22221.1| lysine--tRNA ligase [Escherichia coli 1.2264]
gi|386173388|gb|EIH45400.1| lysine--tRNA ligase [Escherichia coli 99.0741]
gi|386176559|gb|EIH54038.1| lysine--tRNA ligase [Escherichia coli 3.2608]
gi|386187941|gb|EIH76754.1| lysine--tRNA ligase [Escherichia coli 4.0522]
gi|386195051|gb|EIH89287.1| lysine--tRNA ligase [Escherichia coli JB1-95]
gi|386202822|gb|EII01813.1| lysine--tRNA ligase [Escherichia coli 96.154]
gi|386208475|gb|EII12980.1| lysine--tRNA ligase [Escherichia coli 5.0959]
gi|386214142|gb|EII24565.1| lysine--tRNA ligase [Escherichia coli 9.0111]
gi|386218811|gb|EII35294.1| lysine--tRNA ligase [Escherichia coli 4.0967]
gi|386227458|gb|EII54814.1| lysine--tRNA ligase [Escherichia coli 3.3884]
gi|388345899|gb|EIL11642.1| lysyl-tRNA synthetase [Escherichia coli O103:H25 str. CVM9340]
gi|388346827|gb|EIL12537.1| lysyl-tRNA synthetase [Escherichia coli O103:H2 str. CVM9450]
gi|388365605|gb|EIL29388.1| lysyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9570]
gi|388368956|gb|EIL32576.1| lysyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9574]
gi|388408146|gb|EIL68506.1| lysyl-tRNA synthetase [Escherichia coli 541-1]
gi|388421582|gb|EIL81192.1| lysyl-tRNA synthetase [Escherichia coli CUMT8]
gi|391246237|gb|EIQ05498.1| lysyl-tRNA synthetase [Shigella flexneri 2850-71]
gi|391248053|gb|EIQ07297.1| lysyl-tRNA synthetase [Shigella flexneri CCH060]
gi|391248824|gb|EIQ08062.1| lysyl-tRNA synthetase [Shigella flexneri K-1770]
gi|391259411|gb|EIQ18485.1| lysyl-tRNA synthetase [Shigella flexneri K-315]
gi|391264059|gb|EIQ23055.1| lysyl-tRNA synthetase [Shigella flexneri K-404]
gi|391275620|gb|EIQ34405.1| lysyl-tRNA synthetase [Shigella boydii 4444-74]
gi|391279344|gb|EIQ38032.1| lysyl-tRNA synthetase [Shigella sonnei 3226-85]
gi|391283182|gb|EIQ41805.1| lysyl-tRNA synthetase [Shigella sonnei 3233-85]
gi|391292947|gb|EIQ51253.1| lysyl-tRNA synthetase [Shigella sonnei 4822-66]
gi|391299016|gb|EIQ56998.1| lysyl-tRNA synthetase [Shigella dysenteriae 225-75]
gi|391303899|gb|EIQ61725.1| lysyl-tRNA synthetase [Escherichia coli EPECa12]
gi|391311503|gb|EIQ69139.1| lysyl-tRNA synthetase [Escherichia coli EPEC C342-62]
gi|391314177|gb|EIQ71734.1| lysyl-tRNA synthetase [Shigella flexneri 1235-66]
gi|394386750|gb|EJE64233.1| lysyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9602]
gi|394396232|gb|EJE72608.1| lysyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9634]
gi|397784256|gb|EJK95112.1| lysyl-tRNA synthetase [Escherichia coli STEC_O31]
gi|397895821|gb|EJL12246.1| lysyl-tRNA synthetase [Shigella flexneri 6603-63]
gi|397897181|gb|EJL13591.1| lysyl-tRNA synthetase [Shigella sonnei str. Moseley]
gi|404336968|gb|EJZ63423.1| lysyl-tRNA synthetase [Shigella flexneri 1485-80]
gi|406776302|gb|AFS55726.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. 2009EL-2050]
gi|407052871|gb|AFS72922.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. 2011C-3493]
gi|407066799|gb|AFS87846.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. 2009EL-2071]
gi|412964248|emb|CCK48176.1| lysine tRNA synthetase, constitutive; suppressor of ColE1 mutation
in primer RNA [Escherichia coli chi7122]
gi|412970838|emb|CCJ45490.1| lysine tRNA synthetase, constitutive; suppressor of ColE1 mutation
in primer RNA [Escherichia coli]
gi|421935347|gb|EKT93039.1| lysyl-tRNA synthetase [Escherichia coli O111:H8 str. CFSAN001632]
gi|429347570|gb|EKY84343.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02092]
gi|429358606|gb|EKY95275.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02030]
gi|429360351|gb|EKY97010.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02033-1]
gi|429360662|gb|EKY97320.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02093]
gi|429364030|gb|EKZ00655.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02318]
gi|429375585|gb|EKZ12119.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02281]
gi|429377993|gb|EKZ14508.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-03439]
gi|429389638|gb|EKZ26058.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02913]
gi|429393472|gb|EKZ29867.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-03943]
gi|429403476|gb|EKZ39760.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-04080]
gi|429404661|gb|EKZ40932.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-9990]
gi|429408176|gb|EKZ44416.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-9450]
gi|429413280|gb|EKZ49469.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4987]
gi|429416009|gb|EKZ52167.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4984]
gi|429419690|gb|EKZ55825.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4986]
gi|429430529|gb|EKZ66590.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4988]
gi|429434895|gb|EKZ70916.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-5603]
gi|429437028|gb|EKZ73040.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-6006]
gi|429441977|gb|EKZ77940.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-5604]
gi|429446698|gb|EKZ82626.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec12-0465]
gi|429450310|gb|EKZ86206.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-9941]
gi|429456067|gb|EKZ91914.1| lysyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec12-0466]
gi|430897322|gb|ELC19532.1| lysyl-tRNA synthetase [Escherichia coli KTE12]
gi|431004712|gb|ELD19921.1| lysyl-tRNA synthetase [Escherichia coli KTE210]
gi|431061839|gb|ELD71132.1| lysyl-tRNA synthetase [Escherichia coli KTE233]
gi|431212701|gb|ELF10627.1| lysyl-tRNA synthetase [Escherichia coli KTE142]
gi|431294534|gb|ELF84713.1| lysyl-tRNA synthetase [Escherichia coli KTE29]
gi|431308303|gb|ELF96583.1| lysyl-tRNA synthetase [Escherichia coli KTE48]
gi|431353506|gb|ELG40259.1| lysyl-tRNA synthetase [Escherichia coli KTE91]
gi|431360933|gb|ELG47532.1| lysyl-tRNA synthetase [Escherichia coli KTE101]
gi|431383374|gb|ELG67498.1| lysyl-tRNA synthetase [Escherichia coli KTE135]
gi|431383881|gb|ELG68004.1| lysyl-tRNA synthetase [Escherichia coli KTE136]
gi|431451749|gb|ELH32220.1| lysyl-tRNA synthetase [Escherichia coli KTE184]
gi|431468663|gb|ELH48596.1| lysyl-tRNA synthetase [Escherichia coli KTE203]
gi|431608553|gb|ELI77895.1| lysyl-tRNA synthetase [Escherichia coli KTE138]
gi|431644788|gb|ELJ12442.1| lysyl-tRNA synthetase [Escherichia coli KTE163]
gi|431654746|gb|ELJ21793.1| lysyl-tRNA synthetase [Escherichia coli KTE166]
gi|431714316|gb|ELJ78508.1| lysyl-tRNA synthetase [Escherichia coli KTE90]
gi|443423448|gb|AGC88352.1| lysyl-tRNA synthetase [Escherichia coli APEC O78]
Length = 505
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 234/440 (53%), Positives = 312/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDILGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+S IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +G T
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y LDF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 EVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR+++I N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARRNDI-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q+ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFLDQVAAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|206580188|ref|YP_002239893.1| lysyl-tRNA synthetase [Klebsiella pneumoniae 342]
gi|288936730|ref|YP_003440789.1| lysyl-tRNA synthetase [Klebsiella variicola At-22]
gi|290510214|ref|ZP_06549584.1| lysyl-tRNA synthetase [Klebsiella sp. 1_1_55]
gi|206569246|gb|ACI11022.1| lysyl-tRNA synthetase LysS homolog [Klebsiella pneumoniae 342]
gi|288891439|gb|ADC59757.1| lysyl-tRNA synthetase [Klebsiella variicola At-22]
gi|289776930|gb|EFD84928.1| lysyl-tRNA synthetase [Klebsiella sp. 1_1_55]
Length = 505
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 228/440 (51%), Positives = 315/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +RVMGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDII A+G LF
Sbjct: 75 MTRRVMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDIIAARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE++YR RY+DLI NE +R F+ R+Q
Sbjct: 130 KTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANEESRHTFRIRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++++R FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILATMRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + +G T
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQTVLGKT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y ++ DF K FEKLT+ EAIKK+ P+ N DL N K+ + + + + L
Sbjct: 310 EVPYGDQVFDFGKPFEKLTMREAIKKHRPETNMADLDNFDAAKALAESLGIQVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF++Q++ K + E + +YD DY+ ALEYG+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFQDQVNAKAAGDDE-AMFYDEDYVTALEYGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|432948952|ref|ZP_20143875.1| lysyl-tRNA synthetase [Escherichia coli KTE196]
gi|433044429|ref|ZP_20231917.1| lysyl-tRNA synthetase [Escherichia coli KTE117]
gi|431455584|gb|ELH35939.1| lysyl-tRNA synthetase [Escherichia coli KTE196]
gi|431554664|gb|ELI28543.1| lysyl-tRNA synthetase [Escherichia coli KTE117]
Length = 505
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 233/440 (52%), Positives = 312/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDILGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+S IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +G T
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y LDF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 EVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q+ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFLDQVAAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|194431772|ref|ZP_03064063.1| lysyl-tRNA synthetase LysS [Shigella dysenteriae 1012]
gi|416279921|ref|ZP_11645066.1| lysyl-tRNA synthetase [Shigella boydii ATCC 9905]
gi|417673896|ref|ZP_12323341.1| lysyl-tRNA synthetase [Shigella dysenteriae 155-74]
gi|420348878|ref|ZP_14850259.1| lysyl-tRNA synthetase [Shigella boydii 965-58]
gi|194420128|gb|EDX36206.1| lysyl-tRNA synthetase LysS [Shigella dysenteriae 1012]
gi|320182208|gb|EFW57111.1| lysyl-tRNA synthetase [Shigella boydii ATCC 9905]
gi|332087728|gb|EGI92855.1| lysyl-tRNA synthetase [Shigella dysenteriae 155-74]
gi|391267064|gb|EIQ26001.1| lysyl-tRNA synthetase [Shigella boydii 965-58]
Length = 505
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 234/440 (53%), Positives = 312/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDILGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+S IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +G T
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y LDF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 EVTYGDVTLDFGKPFEKLTMHEAIKKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR+++I N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARRNDI-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q+ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFLDQVAAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|417086384|ref|ZP_11953584.1| lysine tRNA synthetase, constitutive [Escherichia coli cloneA_i1]
gi|355350540|gb|EHF99737.1| lysine tRNA synthetase, constitutive [Escherichia coli cloneA_i1]
Length = 505
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 233/440 (52%), Positives = 312/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDILGAKGELF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+S IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +G T
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y LDF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 EVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q+ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFLDQVAAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|383816017|ref|ZP_09971422.1| lysyl-tRNA synthetase [Serratia sp. M24T3]
gi|383295185|gb|EIC83514.1| lysyl-tRNA synthetase [Serratia sp. M24T3]
Length = 510
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 231/440 (52%), Positives = 314/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY+S + + + Y + FK +D+GDI+GA+G LF
Sbjct: 80 MTRRIMGKASFVTLQDVGG-----RIQLYVSRDDLLEGQYNEEFKKWDLGDILGARGKLF 134
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI V+ L+L+TK+LRPLP+KF L++QE +YR RY+DLI N+++R FK R+Q
Sbjct: 135 KTKTGELSIHVTELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANDDSRNTFKIRSQ 194
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM + DFMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 195 IMAGIRKFMVEQDFMEVETPMMQVIPGGASARPFITHHNALDIDMYLRIAPELYLKRLVV 254
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF+++FEIN+NFRNEG+SPRHNPEFTM+E Y AY +Y L+ TE + + + +G++
Sbjct: 255 GGFDRVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYRDLIVLTESLFRTLTETVLGSS 314
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y + DF K F KLT+ EAI KY P+ N DL + + + K + L
Sbjct: 315 VVQYGDQTFDFGKPFTKLTMTEAILKYRPETNVEDLADMAKATVIAESLGIKIEKSWGLG 374
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEET E+ L PT+IT YP E+SPLAR+ N EN +T+RFE FI G EI
Sbjct: 375 RVVCEI-----FEETAESHLIQPTFITEYPAEVSPLARR-NDENPEVTDRFEFFIGGREI 428
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q+ K+ + E + +YD DY+ ALE+GMPP +G GIG+DR+
Sbjct: 429 GNGFSELNDAEDQAQRFADQVAAKDAGDDE-AMFYDEDYVTALEHGMPPTAGLGIGIDRM 487
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 488 VMLFTNSHTIRDVILFPAMR 507
>gi|423107133|ref|ZP_17094828.1| lysyl-tRNA synthetase [Klebsiella oxytoca 10-5243]
gi|423113010|ref|ZP_17100701.1| lysyl-tRNA synthetase [Klebsiella oxytoca 10-5245]
gi|376389259|gb|EHT01951.1| lysyl-tRNA synthetase [Klebsiella oxytoca 10-5243]
gi|376389552|gb|EHT02242.1| lysyl-tRNA synthetase [Klebsiella oxytoca 10-5245]
Length = 505
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 229/440 (52%), Positives = 312/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDII A+G LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLAEGVYNEQFKKWDLGDIIAARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI NE +R FK R+Q
Sbjct: 130 KTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNEESRHTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++++R FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILATMRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + +G T
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQTVLGKT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y ++ DF K FEKLT+ EAIKKY P+ DL N K+ + I + L
Sbjct: 310 EVPYGDQVFDFGKPFEKLTMREAIKKYRPETEMADLDNFDAAKALAESIGIHVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF++Q++ K + E + +YD DY+ ALEYG+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFQDQVNAKAAGDDE-AMFYDEDYVTALEYGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|170682698|ref|YP_001745043.1| lysyl-tRNA synthetase [Escherichia coli SMS-3-5]
gi|432603548|ref|ZP_19839790.1| lysyl-tRNA synthetase [Escherichia coli KTE66]
gi|170520416|gb|ACB18594.1| lysyl-tRNA synthetase LysS [Escherichia coli SMS-3-5]
gi|431139907|gb|ELE41685.1| lysyl-tRNA synthetase [Escherichia coli KTE66]
Length = 505
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 233/440 (52%), Positives = 312/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGIYNEQFKKWDLGDILGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+S IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +G T
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y LDF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 EVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q+ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFLDQVAAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|82545487|ref|YP_409434.1| lysyl-tRNA synthetase [Shigella boydii Sb227]
gi|417683813|ref|ZP_12333156.1| lysyl-tRNA synthetase [Shigella boydii 3594-74]
gi|123728331|sp|Q31WF2.1|SYK_SHIBS RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|81246898|gb|ABB67606.1| lysine tRNA synthetase, constitutive [Shigella boydii Sb227]
gi|332090907|gb|EGI95998.1| lysyl-tRNA synthetase [Shigella boydii 3594-74]
Length = 505
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 234/440 (53%), Positives = 312/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDILGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+S IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +G T
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y LDF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 EVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR+++I N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARRNDI-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q+ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFLDQVAAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|16130792|ref|NP_417366.1| lysine tRNA synthetase, constitutive [Escherichia coli str. K-12
substr. MG1655]
gi|26249304|ref|NP_755344.1| lysyl-tRNA synthetase [Escherichia coli CFT073]
gi|91212268|ref|YP_542254.1| lysyl-tRNA synthetase [Escherichia coli UTI89]
gi|110643038|ref|YP_670768.1| lysyl-tRNA synthetase [Escherichia coli 536]
gi|117625121|ref|YP_854109.1| lysyl-tRNA synthetase [Escherichia coli APEC O1]
gi|157162350|ref|YP_001459668.1| lysyl-tRNA synthetase [Escherichia coli HS]
gi|170018864|ref|YP_001723818.1| lysyl-tRNA synthetase [Escherichia coli ATCC 8739]
gi|170082451|ref|YP_001731771.1| lysyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B]
gi|188493495|ref|ZP_03000765.1| lysyl-tRNA synthetase LysS [Escherichia coli 53638]
gi|191173251|ref|ZP_03034782.1| lysyl-tRNA synthetase [Escherichia coli F11]
gi|194436902|ref|ZP_03069002.1| lysyl-tRNA synthetase LysS [Escherichia coli 101-1]
gi|209920344|ref|YP_002294428.1| lysyl-tRNA synthetase [Escherichia coli SE11]
gi|218559883|ref|YP_002392796.1| lysyl-tRNA synthetase [Escherichia coli S88]
gi|218691015|ref|YP_002399227.1| lysyl-tRNA synthetase [Escherichia coli ED1a]
gi|218701599|ref|YP_002409228.1| lysyl-tRNA synthetase [Escherichia coli IAI39]
gi|218706396|ref|YP_002413915.1| lysyl-tRNA synthetase [Escherichia coli UMN026]
gi|222157580|ref|YP_002557719.1| Lysyl-tRNA synthetase [Escherichia coli LF82]
gi|227888438|ref|ZP_04006243.1| lysine tRNA synthetase, constitutive [Escherichia coli 83972]
gi|237706467|ref|ZP_04536948.1| lysyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
gi|238902015|ref|YP_002927811.1| lysyl-tRNA synthetase [Escherichia coli BW2952]
gi|251786149|ref|YP_003000453.1| lysyl tRNA synthetase (LysRSs), constitutive, subunit of lysyl-tRNA
synthetase, constitutive [Escherichia coli BL21(DE3)]
gi|253772269|ref|YP_003035100.1| lysyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|254162802|ref|YP_003045910.1| lysyl-tRNA synthetase [Escherichia coli B str. REL606]
gi|254289562|ref|YP_003055310.1| lysine tRNA synthetase, constitutive [Escherichia coli BL21(DE3)]
gi|291284210|ref|YP_003501028.1| Lysyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
gi|293406388|ref|ZP_06650314.1| lysyl-tRNA synthetase [Escherichia coli FVEC1412]
gi|293412248|ref|ZP_06654971.1| lysyl-tRNA synthetase [Escherichia coli B354]
gi|293416143|ref|ZP_06658783.1| lysyl-tRNA synthetase [Escherichia coli B185]
gi|298382124|ref|ZP_06991721.1| lysS [Escherichia coli FVEC1302]
gi|300896215|ref|ZP_07114764.1| lysyl-tRNA synthetase [Escherichia coli MS 198-1]
gi|300925130|ref|ZP_07141044.1| lysyl-tRNA synthetase [Escherichia coli MS 182-1]
gi|300928175|ref|ZP_07143717.1| lysyl-tRNA synthetase [Escherichia coli MS 187-1]
gi|300947610|ref|ZP_07161782.1| lysyl-tRNA synthetase [Escherichia coli MS 116-1]
gi|300954271|ref|ZP_07166734.1| lysyl-tRNA synthetase [Escherichia coli MS 175-1]
gi|300980317|ref|ZP_07174971.1| lysyl-tRNA synthetase [Escherichia coli MS 45-1]
gi|300995679|ref|ZP_07181207.1| lysyl-tRNA synthetase [Escherichia coli MS 200-1]
gi|301027418|ref|ZP_07190755.1| lysyl-tRNA synthetase [Escherichia coli MS 69-1]
gi|301027813|ref|ZP_07191118.1| lysyl-tRNA synthetase [Escherichia coli MS 196-1]
gi|301049327|ref|ZP_07196297.1| lysyl-tRNA synthetase [Escherichia coli MS 185-1]
gi|301643761|ref|ZP_07243799.1| lysyl-tRNA synthetase [Escherichia coli MS 146-1]
gi|306812208|ref|ZP_07446406.1| lysyl-tRNA synthetase [Escherichia coli NC101]
gi|312972869|ref|ZP_07787042.1| lysyl-tRNA synthetase [Escherichia coli 1827-70]
gi|331643579|ref|ZP_08344710.1| lysine--tRNA ligase [Escherichia coli H736]
gi|331648635|ref|ZP_08349723.1| lysine--tRNA ligase [Escherichia coli M605]
gi|331659019|ref|ZP_08359961.1| lysine--tRNA ligase [Escherichia coli TA206]
gi|331664462|ref|ZP_08365368.1| lysine--tRNA ligase [Escherichia coli TA143]
gi|331684515|ref|ZP_08385107.1| lysine--tRNA ligase [Escherichia coli H299]
gi|386281935|ref|ZP_10059594.1| lysyl-tRNA synthetase [Escherichia sp. 4_1_40B]
gi|386594375|ref|YP_006090775.1| lysyl-tRNA synthetase [Escherichia coli DH1]
gi|386600888|ref|YP_006102394.1| lysyl-tRNA synthetase LysS [Escherichia coli IHE3034]
gi|386603053|ref|YP_006109353.1| lysyl-tRNA synthetase [Escherichia coli UM146]
gi|386615616|ref|YP_006135282.1| lysyl-tRNA synthetase LysS [Escherichia coli UMNK88]
gi|386620462|ref|YP_006140042.1| lysyl-tRNA synthetase [Escherichia coli NA114]
gi|386625616|ref|YP_006145344.1| lysine tRNA synthetase, constitutive [Escherichia coli O7:K1 str.
CE10]
gi|386630633|ref|YP_006150353.1| lysyl-tRNA synthetase [Escherichia coli str. 'clone D i2']
gi|386635553|ref|YP_006155272.1| lysyl-tRNA synthetase [Escherichia coli str. 'clone D i14']
gi|386640374|ref|YP_006107172.1| lysine tRNA synthetase [Escherichia coli ABU 83972]
gi|386706144|ref|YP_006169991.1| lysyl-tRNA synthetase [Escherichia coli P12b]
gi|387508241|ref|YP_006160497.1| lysyl-tRNA synthetase [Escherichia coli O55:H7 str. RM12579]
gi|387608538|ref|YP_006097394.1| lysyl-tRNA synthetase [Escherichia coli 042]
gi|387613514|ref|YP_006116630.1| lysyl-tRNA synthetase [Escherichia coli ETEC H10407]
gi|387618162|ref|YP_006121184.1| lysyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
gi|387622565|ref|YP_006130193.1| lysyl-tRNA synthetase [Escherichia coli DH1]
gi|387830738|ref|YP_003350675.1| lysyl-tRNA synthetase [Escherichia coli SE15]
gi|388478899|ref|YP_491091.1| lysine tRNA synthetase [Escherichia coli str. K-12 substr. W3110]
gi|404376188|ref|ZP_10981362.1| lysyl-tRNA synthetase [Escherichia sp. 1_1_43]
gi|415779418|ref|ZP_11490147.1| lysyl-tRNA synthetase [Escherichia coli 3431]
gi|416336874|ref|ZP_11673344.1| lysyl-tRNA synthetase [Escherichia coli WV_060327]
gi|416811004|ref|ZP_11889629.1| lysyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97]
gi|416821695|ref|ZP_11894280.1| lysyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905]
gi|417140606|ref|ZP_11983856.1| lysine--tRNA ligase [Escherichia coli 97.0259]
gi|417262679|ref|ZP_12050153.1| lysine--tRNA ligase [Escherichia coli 2.3916]
gi|417271917|ref|ZP_12059266.1| lysine--tRNA ligase [Escherichia coli 2.4168]
gi|417277176|ref|ZP_12064501.1| lysine--tRNA ligase [Escherichia coli 3.2303]
gi|417285844|ref|ZP_12073135.1| lysine--tRNA ligase [Escherichia coli TW07793]
gi|417292863|ref|ZP_12080144.1| lysine--tRNA ligase [Escherichia coli B41]
gi|417309349|ref|ZP_12096187.1| hypothetical protein PPECC33_27590 [Escherichia coli PCN033]
gi|417587925|ref|ZP_12238691.1| lysyl-tRNA synthetase [Escherichia coli STEC_C165-02]
gi|417598237|ref|ZP_12248869.1| lysyl-tRNA synthetase [Escherichia coli 3030-1]
gi|417614353|ref|ZP_12264810.1| lysyl-tRNA synthetase [Escherichia coli STEC_EH250]
gi|417619483|ref|ZP_12269896.1| lysyl-tRNA synthetase [Escherichia coli G58-1]
gi|417630228|ref|ZP_12280464.1| lysyl-tRNA synthetase [Escherichia coli STEC_MHI813]
gi|417635915|ref|ZP_12286126.1| lysyl-tRNA synthetase [Escherichia coli STEC_S1191]
gi|417663449|ref|ZP_12313029.1| lysyl-tRNA synthetase (class 2) [Escherichia coli AA86]
gi|417945528|ref|ZP_12588760.1| lysyl-tRNA synthetase [Escherichia coli XH140A]
gi|417976747|ref|ZP_12617538.1| lysyl-tRNA synthetase [Escherichia coli XH001]
gi|418304448|ref|ZP_12916242.1| lysyl-tRNA synthetase [Escherichia coli UMNF18]
gi|418956741|ref|ZP_13508666.1| lysyl-tRNA synthetase [Escherichia coli J53]
gi|419116277|ref|ZP_13661292.1| lysyl-tRNA synthetase [Escherichia coli DEC5A]
gi|419121969|ref|ZP_13666915.1| lysyl-tRNA synthetase [Escherichia coli DEC5B]
gi|419127479|ref|ZP_13672356.1| lysyl-tRNA synthetase [Escherichia coli DEC5C]
gi|419132906|ref|ZP_13677740.1| lysyl-tRNA synthetase [Escherichia coli DEC5D]
gi|419138054|ref|ZP_13682845.1| lysyl-tRNA synthetase [Escherichia coli DEC5E]
gi|419143831|ref|ZP_13688564.1| lysyl-tRNA synthetase [Escherichia coli DEC6A]
gi|419149831|ref|ZP_13694482.1| lysyl-tRNA synthetase [Escherichia coli DEC6B]
gi|419155328|ref|ZP_13699887.1| lysyl-tRNA synthetase [Escherichia coli DEC6C]
gi|419160636|ref|ZP_13705136.1| lysyl-tRNA synthetase [Escherichia coli DEC6D]
gi|419165686|ref|ZP_13710140.1| lysyl-tRNA synthetase [Escherichia coli DEC6E]
gi|419176679|ref|ZP_13720491.1| lysyl-tRNA synthetase [Escherichia coli DEC7B]
gi|419701695|ref|ZP_14229294.1| lysyl-tRNA synthetase [Escherichia coli SCI-07]
gi|419811202|ref|ZP_14336078.1| lysyl-tRNA synthetase [Escherichia coli O32:H37 str. P4]
gi|419916087|ref|ZP_14434418.1| lysyl-tRNA synthetase [Escherichia coli KD1]
gi|419934687|ref|ZP_14451791.1| lysyl-tRNA synthetase [Escherichia coli 576-1]
gi|419939638|ref|ZP_14456426.1| lysyl-tRNA synthetase [Escherichia coli 75]
gi|419944522|ref|ZP_14461000.1| lysyl-tRNA synthetase [Escherichia coli HM605]
gi|422331906|ref|ZP_16412921.1| lysyl-tRNA synthetase [Escherichia coli 4_1_47FAA]
gi|422354743|ref|ZP_16435468.1| lysyl-tRNA synthetase [Escherichia coli MS 117-3]
gi|422356755|ref|ZP_16437428.1| lysyl-tRNA synthetase [Escherichia coli MS 110-3]
gi|422363398|ref|ZP_16443935.1| lysyl-tRNA synthetase [Escherichia coli MS 153-1]
gi|422372522|ref|ZP_16452879.1| lysyl-tRNA synthetase [Escherichia coli MS 16-3]
gi|422376976|ref|ZP_16457222.1| lysyl-tRNA synthetase [Escherichia coli MS 60-1]
gi|422383225|ref|ZP_16463377.1| lysyl-tRNA synthetase [Escherichia coli MS 57-2]
gi|422750089|ref|ZP_16804000.1| lysyl-tRNA synthetase [Escherichia coli H252]
gi|422754335|ref|ZP_16808161.1| lysyl-tRNA synthetase [Escherichia coli H263]
gi|422767608|ref|ZP_16821334.1| lysyl-tRNA synthetase [Escherichia coli E1520]
gi|422771243|ref|ZP_16824933.1| lysyl-tRNA synthetase [Escherichia coli E482]
gi|422787600|ref|ZP_16840338.1| lysyl-tRNA synthetase [Escherichia coli H489]
gi|422818011|ref|ZP_16866224.1| lysyl-tRNA synthetase [Escherichia coli M919]
gi|422840884|ref|ZP_16888854.1| lysyl-tRNA synthetase [Escherichia coli H397]
gi|422959635|ref|ZP_16971270.1| lysyl-tRNA synthetase [Escherichia coli H494]
gi|422969965|ref|ZP_16973758.1| lysyl-tRNA synthetase [Escherichia coli TA124]
gi|423703757|ref|ZP_17678182.1| lysyl-tRNA synthetase [Escherichia coli H730]
gi|425116417|ref|ZP_18518208.1| lysine--tRNA ligase [Escherichia coli 8.0566]
gi|425121175|ref|ZP_18522862.1| lysine--tRNA ligase [Escherichia coli 8.0569]
gi|425250669|ref|ZP_18643611.1| lysine--tRNA ligase [Escherichia coli 5905]
gi|425274063|ref|ZP_18665464.1| lysine--tRNA ligase [Escherichia coli TW15901]
gi|425284588|ref|ZP_18675620.1| lysine--tRNA ligase [Escherichia coli TW00353]
gi|425301719|ref|ZP_18691604.1| lysine--tRNA ligase [Escherichia coli 07798]
gi|425306652|ref|ZP_18696339.1| lysine--tRNA ligase [Escherichia coli N1]
gi|425423735|ref|ZP_18804898.1| lysine--tRNA ligase [Escherichia coli 0.1288]
gi|432354810|ref|ZP_19598079.1| lysyl-tRNA synthetase [Escherichia coli KTE2]
gi|432359214|ref|ZP_19602430.1| lysyl-tRNA synthetase [Escherichia coli KTE4]
gi|432364061|ref|ZP_19607218.1| lysyl-tRNA synthetase [Escherichia coli KTE5]
gi|432366357|ref|ZP_19609476.1| lysyl-tRNA synthetase [Escherichia coli KTE10]
gi|432382594|ref|ZP_19625533.1| lysyl-tRNA synthetase [Escherichia coli KTE15]
gi|432388527|ref|ZP_19631408.1| lysyl-tRNA synthetase [Escherichia coli KTE16]
gi|432393367|ref|ZP_19636195.1| lysyl-tRNA synthetase [Escherichia coli KTE21]
gi|432398816|ref|ZP_19641592.1| lysyl-tRNA synthetase [Escherichia coli KTE25]
gi|432403162|ref|ZP_19645910.1| lysyl-tRNA synthetase [Escherichia coli KTE26]
gi|432407941|ref|ZP_19650646.1| lysyl-tRNA synthetase [Escherichia coli KTE28]
gi|432413015|ref|ZP_19655674.1| lysyl-tRNA synthetase [Escherichia coli KTE39]
gi|432418352|ref|ZP_19660948.1| lysyl-tRNA synthetase [Escherichia coli KTE44]
gi|432423205|ref|ZP_19665745.1| lysyl-tRNA synthetase [Escherichia coli KTE178]
gi|432427432|ref|ZP_19669923.1| lysyl-tRNA synthetase [Escherichia coli KTE181]
gi|432433088|ref|ZP_19675513.1| lysyl-tRNA synthetase [Escherichia coli KTE187]
gi|432437571|ref|ZP_19679958.1| lysyl-tRNA synthetase [Escherichia coli KTE188]
gi|432442323|ref|ZP_19684660.1| lysyl-tRNA synthetase [Escherichia coli KTE189]
gi|432447437|ref|ZP_19689735.1| lysyl-tRNA synthetase [Escherichia coli KTE191]
gi|432451060|ref|ZP_19693318.1| lysyl-tRNA synthetase [Escherichia coli KTE193]
gi|432457914|ref|ZP_19700093.1| lysyl-tRNA synthetase [Escherichia coli KTE201]
gi|432461894|ref|ZP_19704036.1| lysyl-tRNA synthetase [Escherichia coli KTE204]
gi|432467049|ref|ZP_19709134.1| lysyl-tRNA synthetase [Escherichia coli KTE205]
gi|432472197|ref|ZP_19714237.1| lysyl-tRNA synthetase [Escherichia coli KTE206]
gi|432477129|ref|ZP_19719121.1| lysyl-tRNA synthetase [Escherichia coli KTE208]
gi|432486655|ref|ZP_19728565.1| lysyl-tRNA synthetase [Escherichia coli KTE212]
gi|432490656|ref|ZP_19732520.1| lysyl-tRNA synthetase [Escherichia coli KTE213]
gi|432496907|ref|ZP_19738702.1| lysyl-tRNA synthetase [Escherichia coli KTE214]
gi|432501336|ref|ZP_19743090.1| lysyl-tRNA synthetase [Escherichia coli KTE216]
gi|432505654|ref|ZP_19747375.1| lysyl-tRNA synthetase [Escherichia coli KTE220]
gi|432515157|ref|ZP_19752378.1| lysyl-tRNA synthetase [Escherichia coli KTE224]
gi|432525045|ref|ZP_19762169.1| lysyl-tRNA synthetase [Escherichia coli KTE230]
gi|432539160|ref|ZP_19776057.1| lysyl-tRNA synthetase [Escherichia coli KTE235]
gi|432544532|ref|ZP_19781372.1| lysyl-tRNA synthetase [Escherichia coli KTE236]
gi|432550022|ref|ZP_19786786.1| lysyl-tRNA synthetase [Escherichia coli KTE237]
gi|432554931|ref|ZP_19791650.1| lysyl-tRNA synthetase [Escherichia coli KTE47]
gi|432560073|ref|ZP_19796736.1| lysyl-tRNA synthetase [Escherichia coli KTE49]
gi|432565203|ref|ZP_19801776.1| lysyl-tRNA synthetase [Escherichia coli KTE51]
gi|432569934|ref|ZP_19806442.1| lysyl-tRNA synthetase [Escherichia coli KTE53]
gi|432575069|ref|ZP_19811543.1| lysyl-tRNA synthetase [Escherichia coli KTE55]
gi|432577093|ref|ZP_19813546.1| lysyl-tRNA synthetase [Escherichia coli KTE56]
gi|432582021|ref|ZP_19818435.1| lysyl-tRNA synthetase [Escherichia coli KTE57]
gi|432589199|ref|ZP_19825552.1| lysyl-tRNA synthetase [Escherichia coli KTE58]
gi|432594067|ref|ZP_19830380.1| lysyl-tRNA synthetase [Escherichia coli KTE60]
gi|432599064|ref|ZP_19835335.1| lysyl-tRNA synthetase [Escherichia coli KTE62]
gi|432608733|ref|ZP_19844916.1| lysyl-tRNA synthetase [Escherichia coli KTE67]
gi|432612875|ref|ZP_19849033.1| lysyl-tRNA synthetase [Escherichia coli KTE72]
gi|432618083|ref|ZP_19854191.1| lysyl-tRNA synthetase [Escherichia coli KTE75]
gi|432623111|ref|ZP_19859133.1| lysyl-tRNA synthetase [Escherichia coli KTE76]
gi|432628523|ref|ZP_19864495.1| lysyl-tRNA synthetase [Escherichia coli KTE77]
gi|432632660|ref|ZP_19868582.1| lysyl-tRNA synthetase [Escherichia coli KTE80]
gi|432638105|ref|ZP_19873972.1| lysyl-tRNA synthetase [Escherichia coli KTE81]
gi|432642370|ref|ZP_19878198.1| lysyl-tRNA synthetase [Escherichia coli KTE83]
gi|432647427|ref|ZP_19883213.1| lysyl-tRNA synthetase [Escherichia coli KTE86]
gi|432652377|ref|ZP_19888128.1| lysyl-tRNA synthetase [Escherichia coli KTE87]
gi|432657018|ref|ZP_19892718.1| lysyl-tRNA synthetase [Escherichia coli KTE93]
gi|432662101|ref|ZP_19897739.1| lysyl-tRNA synthetase [Escherichia coli KTE111]
gi|432667362|ref|ZP_19902939.1| lysyl-tRNA synthetase [Escherichia coli KTE116]
gi|432671979|ref|ZP_19907504.1| lysyl-tRNA synthetase [Escherichia coli KTE119]
gi|432686707|ref|ZP_19922000.1| lysyl-tRNA synthetase [Escherichia coli KTE156]
gi|432688102|ref|ZP_19923378.1| lysyl-tRNA synthetase [Escherichia coli KTE161]
gi|432695670|ref|ZP_19930864.1| lysyl-tRNA synthetase [Escherichia coli KTE162]
gi|432700286|ref|ZP_19935436.1| lysyl-tRNA synthetase [Escherichia coli KTE169]
gi|432705650|ref|ZP_19940746.1| lysyl-tRNA synthetase [Escherichia coli KTE171]
gi|432707135|ref|ZP_19942213.1| lysyl-tRNA synthetase [Escherichia coli KTE6]
gi|432714610|ref|ZP_19949640.1| lysyl-tRNA synthetase [Escherichia coli KTE8]
gi|432720011|ref|ZP_19954976.1| lysyl-tRNA synthetase [Escherichia coli KTE9]
gi|432724336|ref|ZP_19959251.1| lysyl-tRNA synthetase [Escherichia coli KTE17]
gi|432728917|ref|ZP_19963792.1| lysyl-tRNA synthetase [Escherichia coli KTE18]
gi|432733629|ref|ZP_19968454.1| lysyl-tRNA synthetase [Escherichia coli KTE45]
gi|432738373|ref|ZP_19973127.1| lysyl-tRNA synthetase [Escherichia coli KTE42]
gi|432742606|ref|ZP_19977322.1| lysyl-tRNA synthetase [Escherichia coli KTE23]
gi|432746851|ref|ZP_19981513.1| lysyl-tRNA synthetase [Escherichia coli KTE43]
gi|432755749|ref|ZP_19990295.1| lysyl-tRNA synthetase [Escherichia coli KTE22]
gi|432760715|ref|ZP_19995205.1| lysyl-tRNA synthetase [Escherichia coli KTE46]
gi|432771820|ref|ZP_20006140.1| lysyl-tRNA synthetase [Escherichia coli KTE50]
gi|432775949|ref|ZP_20010214.1| lysyl-tRNA synthetase [Escherichia coli KTE54]
gi|432779829|ref|ZP_20014050.1| lysyl-tRNA synthetase [Escherichia coli KTE59]
gi|432784764|ref|ZP_20018942.1| lysyl-tRNA synthetase [Escherichia coli KTE63]
gi|432788821|ref|ZP_20022949.1| lysyl-tRNA synthetase [Escherichia coli KTE65]
gi|432794056|ref|ZP_20028138.1| lysyl-tRNA synthetase [Escherichia coli KTE78]
gi|432795557|ref|ZP_20029617.1| lysyl-tRNA synthetase [Escherichia coli KTE79]
gi|432803056|ref|ZP_20037011.1| lysyl-tRNA synthetase [Escherichia coli KTE84]
gi|432816584|ref|ZP_20050346.1| lysyl-tRNA synthetase [Escherichia coli KTE115]
gi|432822258|ref|ZP_20055947.1| lysyl-tRNA synthetase [Escherichia coli KTE118]
gi|432823767|ref|ZP_20057437.1| lysyl-tRNA synthetase [Escherichia coli KTE123]
gi|432840682|ref|ZP_20074142.1| lysyl-tRNA synthetase [Escherichia coli KTE140]
gi|432845918|ref|ZP_20078599.1| lysyl-tRNA synthetase [Escherichia coli KTE141]
gi|432854021|ref|ZP_20082566.1| lysyl-tRNA synthetase [Escherichia coli KTE144]
gi|432864119|ref|ZP_20087846.1| lysyl-tRNA synthetase [Escherichia coli KTE146]
gi|432870332|ref|ZP_20090789.1| lysyl-tRNA synthetase [Escherichia coli KTE147]
gi|432890167|ref|ZP_20103176.1| lysyl-tRNA synthetase [Escherichia coli KTE165]
gi|432900099|ref|ZP_20110521.1| lysyl-tRNA synthetase [Escherichia coli KTE192]
gi|432906252|ref|ZP_20114980.1| lysyl-tRNA synthetase [Escherichia coli KTE194]
gi|432914203|ref|ZP_20119743.1| lysyl-tRNA synthetase [Escherichia coli KTE190]
gi|432920968|ref|ZP_20124487.1| lysyl-tRNA synthetase [Escherichia coli KTE173]
gi|432928582|ref|ZP_20129702.1| lysyl-tRNA synthetase [Escherichia coli KTE175]
gi|432939377|ref|ZP_20137480.1| lysyl-tRNA synthetase [Escherichia coli KTE183]
gi|432956580|ref|ZP_20148238.1| lysyl-tRNA synthetase [Escherichia coli KTE197]
gi|432963241|ref|ZP_20152660.1| lysyl-tRNA synthetase [Escherichia coli KTE202]
gi|432973032|ref|ZP_20161893.1| lysyl-tRNA synthetase [Escherichia coli KTE207]
gi|432974998|ref|ZP_20163833.1| lysyl-tRNA synthetase [Escherichia coli KTE209]
gi|432982229|ref|ZP_20171002.1| lysyl-tRNA synthetase [Escherichia coli KTE211]
gi|432986615|ref|ZP_20175332.1| lysyl-tRNA synthetase [Escherichia coli KTE215]
gi|432991969|ref|ZP_20180629.1| lysyl-tRNA synthetase [Escherichia coli KTE217]
gi|432996557|ref|ZP_20185140.1| lysyl-tRNA synthetase [Escherichia coli KTE218]
gi|433001131|ref|ZP_20189652.1| lysyl-tRNA synthetase [Escherichia coli KTE223]
gi|433006348|ref|ZP_20194773.1| lysyl-tRNA synthetase [Escherichia coli KTE227]
gi|433009016|ref|ZP_20197429.1| lysyl-tRNA synthetase [Escherichia coli KTE229]
gi|433015134|ref|ZP_20203472.1| lysyl-tRNA synthetase [Escherichia coli KTE104]
gi|433019983|ref|ZP_20208155.1| lysyl-tRNA synthetase [Escherichia coli KTE105]
gi|433024721|ref|ZP_20212699.1| lysyl-tRNA synthetase [Escherichia coli KTE106]
gi|433029786|ref|ZP_20217638.1| lysyl-tRNA synthetase [Escherichia coli KTE109]
gi|433034743|ref|ZP_20222444.1| lysyl-tRNA synthetase [Escherichia coli KTE112]
gi|433039858|ref|ZP_20227454.1| lysyl-tRNA synthetase [Escherichia coli KTE113]
gi|433049288|ref|ZP_20236628.1| lysyl-tRNA synthetase [Escherichia coli KTE120]
gi|433054541|ref|ZP_20241709.1| lysyl-tRNA synthetase [Escherichia coli KTE122]
gi|433059336|ref|ZP_20246376.1| lysyl-tRNA synthetase [Escherichia coli KTE124]
gi|433064308|ref|ZP_20251221.1| lysyl-tRNA synthetase [Escherichia coli KTE125]
gi|433069189|ref|ZP_20255967.1| lysyl-tRNA synthetase [Escherichia coli KTE128]
gi|433074092|ref|ZP_20260737.1| lysyl-tRNA synthetase [Escherichia coli KTE129]
gi|433079044|ref|ZP_20265566.1| lysyl-tRNA synthetase [Escherichia coli KTE131]
gi|433083786|ref|ZP_20270238.1| lysyl-tRNA synthetase [Escherichia coli KTE133]
gi|433088531|ref|ZP_20274898.1| lysyl-tRNA synthetase [Escherichia coli KTE137]
gi|433097653|ref|ZP_20283832.1| lysyl-tRNA synthetase [Escherichia coli KTE139]
gi|433102440|ref|ZP_20288516.1| lysyl-tRNA synthetase [Escherichia coli KTE145]
gi|433107109|ref|ZP_20293077.1| lysyl-tRNA synthetase [Escherichia coli KTE148]
gi|433112100|ref|ZP_20297957.1| lysyl-tRNA synthetase [Escherichia coli KTE150]
gi|433116739|ref|ZP_20302526.1| lysyl-tRNA synthetase [Escherichia coli KTE153]
gi|433121429|ref|ZP_20307093.1| lysyl-tRNA synthetase [Escherichia coli KTE157]
gi|433126412|ref|ZP_20311964.1| lysyl-tRNA synthetase [Escherichia coli KTE160]
gi|433140480|ref|ZP_20325730.1| lysyl-tRNA synthetase [Escherichia coli KTE167]
gi|433145458|ref|ZP_20330595.1| lysyl-tRNA synthetase [Escherichia coli KTE168]
gi|433150399|ref|ZP_20335413.1| lysyl-tRNA synthetase [Escherichia coli KTE174]
gi|433154967|ref|ZP_20339902.1| lysyl-tRNA synthetase [Escherichia coli KTE176]
gi|433164852|ref|ZP_20349584.1| lysyl-tRNA synthetase [Escherichia coli KTE179]
gi|433169837|ref|ZP_20354460.1| lysyl-tRNA synthetase [Escherichia coli KTE180]
gi|433174777|ref|ZP_20359292.1| lysyl-tRNA synthetase [Escherichia coli KTE232]
gi|433179728|ref|ZP_20364118.1| lysyl-tRNA synthetase [Escherichia coli KTE82]
gi|433184565|ref|ZP_20368805.1| lysyl-tRNA synthetase [Escherichia coli KTE85]
gi|433189640|ref|ZP_20373732.1| lysyl-tRNA synthetase [Escherichia coli KTE88]
gi|433199590|ref|ZP_20383481.1| lysyl-tRNA synthetase [Escherichia coli KTE94]
gi|433204581|ref|ZP_20388337.1| lysyl-tRNA synthetase [Escherichia coli KTE95]
gi|433208973|ref|ZP_20392644.1| lysyl-tRNA synthetase [Escherichia coli KTE97]
gi|433213757|ref|ZP_20397345.1| lysyl-tRNA synthetase [Escherichia coli KTE99]
gi|433322073|ref|ZP_20399577.1| lysyl-tRNA synthetase [Escherichia coli J96]
gi|442593191|ref|ZP_21011146.1| Lysyl-tRNA synthetase (class II) [Escherichia coli O10:K5(L):H4
str. ATCC 23506]
gi|442605021|ref|ZP_21019859.1| Lysyl-tRNA synthetase (class II) [Escherichia coli Nissle 1917]
gi|450192317|ref|ZP_21891552.1| lysyl-tRNA synthetase [Escherichia coli SEPT362]
gi|450221682|ref|ZP_21896584.1| lysyl-tRNA synthetase [Escherichia coli O08]
gi|450248249|ref|ZP_21901366.1| lysyl-tRNA synthetase [Escherichia coli S17]
gi|67473140|sp|P0A8N3.2|SYK1_ECOLI RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|67473141|sp|P0A8N4.2|SYK1_ECOL6 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|26109712|gb|AAN81917.1|AE016766_5 Lysyl-tRNA synthetase [Escherichia coli CFT073]
gi|146341|gb|AAA23959.1| herC protein [Escherichia coli]
gi|887840|gb|AAA83071.1| lysyl tRNA synthetase (LysRS), constitutive [Escherichia coli]
gi|1789256|gb|AAC75928.1| lysine tRNA synthetase, constitutive [Escherichia coli str. K-12
substr. MG1655]
gi|85675702|dbj|BAE76955.1| lysine tRNA synthetase, constitutive [Escherichia coli str. K12
substr. W3110]
gi|91073842|gb|ABE08723.1| lysine tRNA synthetase [Escherichia coli UTI89]
gi|110344630|gb|ABG70867.1| lysyl-tRNA synthetase [Escherichia coli 536]
gi|115514245|gb|ABJ02320.1| lysine tRNA synthetase, constitutive [Escherichia coli APEC O1]
gi|157068030|gb|ABV07285.1| lysyl-tRNA synthetase [Escherichia coli HS]
gi|169753792|gb|ACA76491.1| lysyl-tRNA synthetase [Escherichia coli ATCC 8739]
gi|169890286|gb|ACB03993.1| lysine tRNA synthetase, constitutive [Escherichia coli str. K-12
substr. DH10B]
gi|188488694|gb|EDU63797.1| lysyl-tRNA synthetase LysS [Escherichia coli 53638]
gi|190906502|gb|EDV66110.1| lysyl-tRNA synthetase [Escherichia coli F11]
gi|194424384|gb|EDX40371.1| lysyl-tRNA synthetase LysS [Escherichia coli 101-1]
gi|209760614|gb|ACI78619.1| lysine tRNA synthetase [Escherichia coli]
gi|209913603|dbj|BAG78677.1| lysyl-tRNA synthase [Escherichia coli SE11]
gi|218366652|emb|CAR04406.1| lysine tRNA synthetase, constitutive [Escherichia coli S88]
gi|218371585|emb|CAR19424.1| lysine tRNA synthetase, constitutive [Escherichia coli IAI39]
gi|218428579|emb|CAR09360.1| lysine tRNA synthetase, constitutive [Escherichia coli ED1a]
gi|218433493|emb|CAR14396.1| lysine tRNA synthetase, constitutive [Escherichia coli UMN026]
gi|222034585|emb|CAP77327.1| Lysyl-tRNA synthetase [Escherichia coli LF82]
gi|226839557|gb|EEH71578.1| lysyl-tRNA synthetase [Escherichia sp. 1_1_43]
gi|226899507|gb|EEH85766.1| lysyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
gi|227834707|gb|EEJ45173.1| lysine tRNA synthetase, constitutive [Escherichia coli 83972]
gi|238861694|gb|ACR63692.1| lysine tRNA synthetase, constitutive [Escherichia coli BW2952]
gi|242378422|emb|CAQ33202.1| lysyl tRNA synthetase (LysRSs), constitutive, subunit of lysyl-tRNA
synthetase, constitutive [Escherichia coli BL21(DE3)]
gi|253323313|gb|ACT27915.1| lysyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253974703|gb|ACT40374.1| lysine tRNA synthetase, constitutive [Escherichia coli B str.
REL606]
gi|253978869|gb|ACT44539.1| lysine tRNA synthetase, constitutive [Escherichia coli BL21(DE3)]
gi|260448064|gb|ACX38486.1| lysyl-tRNA synthetase [Escherichia coli DH1]
gi|281179895|dbj|BAI56225.1| lysyl-tRNA synthetase [Escherichia coli SE15]
gi|284922838|emb|CBG35927.1| lysyl-tRNA synthetase [Escherichia coli 042]
gi|290764083|gb|ADD58044.1| Lysyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
gi|291426394|gb|EFE99426.1| lysyl-tRNA synthetase [Escherichia coli FVEC1412]
gi|291432332|gb|EFF05314.1| lysyl-tRNA synthetase [Escherichia coli B185]
gi|291469019|gb|EFF11510.1| lysyl-tRNA synthetase [Escherichia coli B354]
gi|294492859|gb|ADE91615.1| lysyl-tRNA synthetase LysS [Escherichia coli IHE3034]
gi|298277264|gb|EFI18780.1| lysS [Escherichia coli FVEC1302]
gi|299879075|gb|EFI87286.1| lysyl-tRNA synthetase [Escherichia coli MS 196-1]
gi|300298926|gb|EFJ55311.1| lysyl-tRNA synthetase [Escherichia coli MS 185-1]
gi|300304787|gb|EFJ59307.1| lysyl-tRNA synthetase [Escherichia coli MS 200-1]
gi|300318732|gb|EFJ68516.1| lysyl-tRNA synthetase [Escherichia coli MS 175-1]
gi|300359949|gb|EFJ75819.1| lysyl-tRNA synthetase [Escherichia coli MS 198-1]
gi|300394926|gb|EFJ78464.1| lysyl-tRNA synthetase [Escherichia coli MS 69-1]
gi|300409325|gb|EFJ92863.1| lysyl-tRNA synthetase [Escherichia coli MS 45-1]
gi|300418732|gb|EFK02043.1| lysyl-tRNA synthetase [Escherichia coli MS 182-1]
gi|300452807|gb|EFK16427.1| lysyl-tRNA synthetase [Escherichia coli MS 116-1]
gi|300463815|gb|EFK27308.1| lysyl-tRNA synthetase [Escherichia coli MS 187-1]
gi|301077860|gb|EFK92666.1| lysyl-tRNA synthetase [Escherichia coli MS 146-1]
gi|305854246|gb|EFM54684.1| lysyl-tRNA synthetase [Escherichia coli NC101]
gi|307554866|gb|ADN47641.1| lysine tRNA synthetase [Escherichia coli ABU 83972]
gi|307625537|gb|ADN69841.1| lysyl-tRNA synthetase [Escherichia coli UM146]
gi|309703250|emb|CBJ02585.1| lysyl-tRNA synthetase [Escherichia coli ETEC H10407]
gi|310332811|gb|EFQ00025.1| lysyl-tRNA synthetase [Escherichia coli 1827-70]
gi|312947423|gb|ADR28250.1| lysyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
gi|315137489|dbj|BAJ44648.1| lysyl-tRNA synthetase [Escherichia coli DH1]
gi|315289448|gb|EFU48843.1| lysyl-tRNA synthetase [Escherichia coli MS 110-3]
gi|315293878|gb|EFU53230.1| lysyl-tRNA synthetase [Escherichia coli MS 153-1]
gi|315295677|gb|EFU54997.1| lysyl-tRNA synthetase [Escherichia coli MS 16-3]
gi|315614955|gb|EFU95593.1| lysyl-tRNA synthetase [Escherichia coli 3431]
gi|320195008|gb|EFW69637.1| lysyl-tRNA synthetase [Escherichia coli WV_060327]
gi|320656576|gb|EFX24472.1| lysyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97 TW
07815]
gi|320662096|gb|EFX29497.1| lysyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905]
gi|323935879|gb|EGB32178.1| lysyl-tRNA synthetase [Escherichia coli E1520]
gi|323941590|gb|EGB37770.1| lysyl-tRNA synthetase [Escherichia coli E482]
gi|323951672|gb|EGB47547.1| lysyl-tRNA synthetase [Escherichia coli H252]
gi|323957390|gb|EGB53112.1| lysyl-tRNA synthetase [Escherichia coli H263]
gi|323960814|gb|EGB56435.1| lysyl-tRNA synthetase [Escherichia coli H489]
gi|324005541|gb|EGB74760.1| lysyl-tRNA synthetase [Escherichia coli MS 57-2]
gi|324011761|gb|EGB80980.1| lysyl-tRNA synthetase [Escherichia coli MS 60-1]
gi|324017286|gb|EGB86505.1| lysyl-tRNA synthetase [Escherichia coli MS 117-3]
gi|330908922|gb|EGH37436.1| lysyl-tRNA synthetase (class 2) [Escherichia coli AA86]
gi|331037050|gb|EGI09274.1| lysine--tRNA ligase [Escherichia coli H736]
gi|331042382|gb|EGI14524.1| lysine--tRNA ligase [Escherichia coli M605]
gi|331053601|gb|EGI25630.1| lysine--tRNA ligase [Escherichia coli TA206]
gi|331058393|gb|EGI30374.1| lysine--tRNA ligase [Escherichia coli TA143]
gi|331078130|gb|EGI49336.1| lysine--tRNA ligase [Escherichia coli H299]
gi|332344785|gb|AEE58119.1| lysyl-tRNA synthetase LysS [Escherichia coli UMNK88]
gi|333970963|gb|AEG37768.1| Lysyl-tRNA synthetase [Escherichia coli NA114]
gi|338769010|gb|EGP23792.1| hypothetical protein PPECC33_27590 [Escherichia coli PCN033]
gi|339416546|gb|AEJ58218.1| lysyl-tRNA synthetase [Escherichia coli UMNF18]
gi|342362765|gb|EGU26880.1| lysyl-tRNA synthetase [Escherichia coli XH140A]
gi|344193669|gb|EGV47748.1| lysyl-tRNA synthetase [Escherichia coli XH001]
gi|345334260|gb|EGW66705.1| lysyl-tRNA synthetase [Escherichia coli STEC_C165-02]
gi|345351459|gb|EGW83720.1| lysyl-tRNA synthetase [Escherichia coli 3030-1]
gi|345361387|gb|EGW93548.1| lysyl-tRNA synthetase [Escherichia coli STEC_EH250]
gi|345371799|gb|EGX03768.1| lysyl-tRNA synthetase [Escherichia coli STEC_MHI813]
gi|345374796|gb|EGX06747.1| lysyl-tRNA synthetase [Escherichia coli G58-1]
gi|345386785|gb|EGX16618.1| lysyl-tRNA synthetase [Escherichia coli STEC_S1191]
gi|349739352|gb|AEQ14058.1| lysine tRNA synthetase, constitutive [Escherichia coli O7:K1 str.
CE10]
gi|355421532|gb|AER85729.1| lysyl-tRNA synthetase [Escherichia coli str. 'clone D i2']
gi|355426452|gb|AER90648.1| lysyl-tRNA synthetase [Escherichia coli str. 'clone D i14']
gi|359333132|dbj|BAL39579.1| lysine tRNA synthetase, constitutive [Escherichia coli str. K-12
substr. MDS42]
gi|371594835|gb|EHN83693.1| lysyl-tRNA synthetase [Escherichia coli H494]
gi|371600822|gb|EHN89592.1| lysyl-tRNA synthetase [Escherichia coli TA124]
gi|371605380|gb|EHN93994.1| lysyl-tRNA synthetase [Escherichia coli H397]
gi|373247121|gb|EHP66568.1| lysyl-tRNA synthetase [Escherichia coli 4_1_47FAA]
gi|374360235|gb|AEZ41942.1| lysyl-tRNA synthetase [Escherichia coli O55:H7 str. RM12579]
gi|377959629|gb|EHV23125.1| lysyl-tRNA synthetase [Escherichia coli DEC5A]
gi|377964227|gb|EHV27664.1| lysyl-tRNA synthetase [Escherichia coli DEC5B]
gi|377972619|gb|EHV35967.1| lysyl-tRNA synthetase [Escherichia coli DEC5C]
gi|377974331|gb|EHV37659.1| lysyl-tRNA synthetase [Escherichia coli DEC5D]
gi|377982474|gb|EHV45726.1| lysyl-tRNA synthetase [Escherichia coli DEC5E]
gi|377990936|gb|EHV54092.1| lysyl-tRNA synthetase [Escherichia coli DEC6B]
gi|377991981|gb|EHV55129.1| lysyl-tRNA synthetase [Escherichia coli DEC6A]
gi|377995177|gb|EHV58297.1| lysyl-tRNA synthetase [Escherichia coli DEC6C]
gi|378005825|gb|EHV68817.1| lysyl-tRNA synthetase [Escherichia coli DEC6D]
gi|378008615|gb|EHV71574.1| lysyl-tRNA synthetase [Escherichia coli DEC6E]
gi|378030840|gb|EHV93433.1| lysyl-tRNA synthetase [Escherichia coli DEC7B]
gi|380347157|gb|EIA35446.1| lysyl-tRNA synthetase [Escherichia coli SCI-07]
gi|383104312|gb|AFG41821.1| Lysyl-tRNA synthetase [Escherichia coli P12b]
gi|384380535|gb|EIE38401.1| lysyl-tRNA synthetase [Escherichia coli J53]
gi|385155820|gb|EIF17820.1| lysyl-tRNA synthetase [Escherichia coli O32:H37 str. P4]
gi|385538524|gb|EIF85386.1| lysyl-tRNA synthetase [Escherichia coli M919]
gi|385707791|gb|EIG44818.1| lysyl-tRNA synthetase [Escherichia coli H730]
gi|386121126|gb|EIG69744.1| lysyl-tRNA synthetase [Escherichia sp. 4_1_40B]
gi|386156729|gb|EIH13074.1| lysine--tRNA ligase [Escherichia coli 97.0259]
gi|386224125|gb|EII46474.1| lysine--tRNA ligase [Escherichia coli 2.3916]
gi|386235617|gb|EII67593.1| lysine--tRNA ligase [Escherichia coli 2.4168]
gi|386240050|gb|EII76975.1| lysine--tRNA ligase [Escherichia coli 3.2303]
gi|386251085|gb|EII97252.1| lysine--tRNA ligase [Escherichia coli TW07793]
gi|386255185|gb|EIJ04875.1| lysine--tRNA ligase [Escherichia coli B41]
gi|388382487|gb|EIL44342.1| lysyl-tRNA synthetase [Escherichia coli KD1]
gi|388406808|gb|EIL67192.1| lysyl-tRNA synthetase [Escherichia coli 75]
gi|388407412|gb|EIL67784.1| lysyl-tRNA synthetase [Escherichia coli 576-1]
gi|388418332|gb|EIL78144.1| lysyl-tRNA synthetase [Escherichia coli HM605]
gi|408162898|gb|EKH90785.1| lysine--tRNA ligase [Escherichia coli 5905]
gi|408191678|gb|EKI17277.1| lysine--tRNA ligase [Escherichia coli TW15901]
gi|408200777|gb|EKI25953.1| lysine--tRNA ligase [Escherichia coli TW00353]
gi|408211801|gb|EKI36342.1| lysine--tRNA ligase [Escherichia coli 07798]
gi|408226992|gb|EKI50612.1| lysine--tRNA ligase [Escherichia coli N1]
gi|408342598|gb|EKJ57025.1| lysine--tRNA ligase [Escherichia coli 0.1288]
gi|408565945|gb|EKK42026.1| lysine--tRNA ligase [Escherichia coli 8.0566]
gi|408566937|gb|EKK42998.1| lysine--tRNA ligase [Escherichia coli 8.0569]
gi|430873718|gb|ELB97284.1| lysyl-tRNA synthetase [Escherichia coli KTE2]
gi|430875076|gb|ELB98619.1| lysyl-tRNA synthetase [Escherichia coli KTE4]
gi|430883823|gb|ELC06794.1| lysyl-tRNA synthetase [Escherichia coli KTE5]
gi|430892628|gb|ELC15119.1| lysyl-tRNA synthetase [Escherichia coli KTE10]
gi|430904760|gb|ELC26459.1| lysyl-tRNA synthetase [Escherichia coli KTE16]
gi|430905654|gb|ELC27262.1| lysyl-tRNA synthetase [Escherichia coli KTE15]
gi|430914004|gb|ELC35114.1| lysyl-tRNA synthetase [Escherichia coli KTE25]
gi|430916833|gb|ELC37892.1| lysyl-tRNA synthetase [Escherichia coli KTE21]
gi|430924321|gb|ELC45042.1| lysyl-tRNA synthetase [Escherichia coli KTE26]
gi|430928437|gb|ELC48986.1| lysyl-tRNA synthetase [Escherichia coli KTE28]
gi|430934190|gb|ELC54563.1| lysyl-tRNA synthetase [Escherichia coli KTE39]
gi|430937630|gb|ELC57884.1| lysyl-tRNA synthetase [Escherichia coli KTE44]
gi|430943159|gb|ELC63285.1| lysyl-tRNA synthetase [Escherichia coli KTE178]
gi|430951270|gb|ELC70490.1| lysyl-tRNA synthetase [Escherichia coli KTE187]
gi|430953958|gb|ELC72845.1| lysyl-tRNA synthetase [Escherichia coli KTE181]
gi|430961744|gb|ELC79751.1| lysyl-tRNA synthetase [Escherichia coli KTE188]
gi|430965227|gb|ELC82668.1| lysyl-tRNA synthetase [Escherichia coli KTE189]
gi|430972283|gb|ELC89281.1| lysyl-tRNA synthetase [Escherichia coli KTE191]
gi|430978341|gb|ELC95152.1| lysyl-tRNA synthetase [Escherichia coli KTE193]
gi|430980916|gb|ELC97660.1| lysyl-tRNA synthetase [Escherichia coli KTE201]
gi|430987867|gb|ELD04390.1| lysyl-tRNA synthetase [Escherichia coli KTE204]
gi|430992294|gb|ELD08667.1| lysyl-tRNA synthetase [Escherichia coli KTE205]
gi|430996828|gb|ELD13103.1| lysyl-tRNA synthetase [Escherichia coli KTE206]
gi|431003258|gb|ELD18744.1| lysyl-tRNA synthetase [Escherichia coli KTE208]
gi|431014342|gb|ELD28050.1| lysyl-tRNA synthetase [Escherichia coli KTE212]
gi|431018704|gb|ELD32134.1| lysyl-tRNA synthetase [Escherichia coli KTE213]
gi|431022600|gb|ELD35861.1| lysyl-tRNA synthetase [Escherichia coli KTE214]
gi|431027106|gb|ELD40171.1| lysyl-tRNA synthetase [Escherichia coli KTE216]
gi|431037170|gb|ELD48158.1| lysyl-tRNA synthetase [Escherichia coli KTE220]
gi|431040532|gb|ELD51067.1| lysyl-tRNA synthetase [Escherichia coli KTE224]
gi|431050191|gb|ELD59942.1| lysyl-tRNA synthetase [Escherichia coli KTE230]
gi|431067946|gb|ELD76455.1| lysyl-tRNA synthetase [Escherichia coli KTE235]
gi|431073467|gb|ELD81118.1| lysyl-tRNA synthetase [Escherichia coli KTE236]
gi|431078744|gb|ELD85784.1| lysyl-tRNA synthetase [Escherichia coli KTE237]
gi|431082282|gb|ELD88596.1| lysyl-tRNA synthetase [Escherichia coli KTE47]
gi|431089847|gb|ELD95632.1| lysyl-tRNA synthetase [Escherichia coli KTE49]
gi|431091598|gb|ELD97315.1| lysyl-tRNA synthetase [Escherichia coli KTE51]
gi|431098566|gb|ELE03879.1| lysyl-tRNA synthetase [Escherichia coli KTE53]
gi|431105652|gb|ELE09986.1| lysyl-tRNA synthetase [Escherichia coli KTE55]
gi|431113648|gb|ELE17302.1| lysyl-tRNA synthetase [Escherichia coli KTE56]
gi|431118557|gb|ELE21576.1| lysyl-tRNA synthetase [Escherichia coli KTE58]
gi|431122303|gb|ELE25172.1| lysyl-tRNA synthetase [Escherichia coli KTE57]
gi|431126469|gb|ELE28816.1| lysyl-tRNA synthetase [Escherichia coli KTE60]
gi|431128934|gb|ELE31110.1| lysyl-tRNA synthetase [Escherichia coli KTE62]
gi|431136812|gb|ELE38668.1| lysyl-tRNA synthetase [Escherichia coli KTE67]
gi|431147058|gb|ELE48481.1| lysyl-tRNA synthetase [Escherichia coli KTE72]
gi|431152637|gb|ELE53583.1| lysyl-tRNA synthetase [Escherichia coli KTE75]
gi|431157750|gb|ELE58384.1| lysyl-tRNA synthetase [Escherichia coli KTE76]
gi|431161816|gb|ELE62285.1| lysyl-tRNA synthetase [Escherichia coli KTE77]
gi|431168743|gb|ELE68981.1| lysyl-tRNA synthetase [Escherichia coli KTE80]
gi|431169520|gb|ELE69739.1| lysyl-tRNA synthetase [Escherichia coli KTE81]
gi|431178774|gb|ELE78681.1| lysyl-tRNA synthetase [Escherichia coli KTE86]
gi|431179902|gb|ELE79793.1| lysyl-tRNA synthetase [Escherichia coli KTE83]
gi|431189191|gb|ELE88616.1| lysyl-tRNA synthetase [Escherichia coli KTE93]
gi|431189477|gb|ELE88900.1| lysyl-tRNA synthetase [Escherichia coli KTE87]
gi|431198175|gb|ELE97000.1| lysyl-tRNA synthetase [Escherichia coli KTE111]
gi|431199502|gb|ELE98254.1| lysyl-tRNA synthetase [Escherichia coli KTE116]
gi|431208826|gb|ELF06947.1| lysyl-tRNA synthetase [Escherichia coli KTE119]
gi|431220681|gb|ELF18014.1| lysyl-tRNA synthetase [Escherichia coli KTE156]
gi|431232298|gb|ELF27966.1| lysyl-tRNA synthetase [Escherichia coli KTE162]
gi|431237555|gb|ELF32549.1| lysyl-tRNA synthetase [Escherichia coli KTE161]
gi|431241434|gb|ELF35870.1| lysyl-tRNA synthetase [Escherichia coli KTE171]
gi|431241897|gb|ELF36326.1| lysyl-tRNA synthetase [Escherichia coli KTE169]
gi|431254416|gb|ELF47686.1| lysyl-tRNA synthetase [Escherichia coli KTE8]
gi|431256245|gb|ELF49319.1| lysyl-tRNA synthetase [Escherichia coli KTE6]
gi|431260834|gb|ELF52925.1| lysyl-tRNA synthetase [Escherichia coli KTE9]
gi|431264225|gb|ELF55952.1| lysyl-tRNA synthetase [Escherichia coli KTE17]
gi|431271513|gb|ELF62632.1| lysyl-tRNA synthetase [Escherichia coli KTE18]
gi|431272537|gb|ELF63636.1| lysyl-tRNA synthetase [Escherichia coli KTE45]
gi|431280428|gb|ELF71344.1| lysyl-tRNA synthetase [Escherichia coli KTE42]
gi|431282446|gb|ELF73330.1| lysyl-tRNA synthetase [Escherichia coli KTE23]
gi|431289963|gb|ELF80688.1| lysyl-tRNA synthetase [Escherichia coli KTE43]
gi|431301053|gb|ELF90600.1| lysyl-tRNA synthetase [Escherichia coli KTE22]
gi|431306022|gb|ELF94335.1| lysyl-tRNA synthetase [Escherichia coli KTE46]
gi|431313233|gb|ELG01208.1| lysyl-tRNA synthetase [Escherichia coli KTE50]
gi|431316700|gb|ELG04500.1| lysyl-tRNA synthetase [Escherichia coli KTE54]
gi|431325072|gb|ELG12460.1| lysyl-tRNA synthetase [Escherichia coli KTE59]
gi|431327921|gb|ELG15241.1| lysyl-tRNA synthetase [Escherichia coli KTE63]
gi|431335821|gb|ELG22950.1| lysyl-tRNA synthetase [Escherichia coli KTE65]
gi|431338126|gb|ELG25213.1| lysyl-tRNA synthetase [Escherichia coli KTE78]
gi|431347148|gb|ELG34041.1| lysyl-tRNA synthetase [Escherichia coli KTE84]
gi|431350623|gb|ELG37434.1| lysyl-tRNA synthetase [Escherichia coli KTE79]
gi|431363203|gb|ELG49776.1| lysyl-tRNA synthetase [Escherichia coli KTE115]
gi|431366047|gb|ELG52545.1| lysyl-tRNA synthetase [Escherichia coli KTE118]
gi|431378292|gb|ELG63283.1| lysyl-tRNA synthetase [Escherichia coli KTE123]
gi|431387312|gb|ELG71136.1| lysyl-tRNA synthetase [Escherichia coli KTE140]
gi|431393428|gb|ELG76992.1| lysyl-tRNA synthetase [Escherichia coli KTE141]
gi|431398436|gb|ELG81856.1| lysyl-tRNA synthetase [Escherichia coli KTE144]
gi|431403400|gb|ELG86681.1| lysyl-tRNA synthetase [Escherichia coli KTE146]
gi|431409302|gb|ELG92477.1| lysyl-tRNA synthetase [Escherichia coli KTE147]
gi|431423872|gb|ELH05969.1| lysyl-tRNA synthetase [Escherichia coli KTE192]
gi|431430643|gb|ELH12474.1| lysyl-tRNA synthetase [Escherichia coli KTE194]
gi|431432068|gb|ELH13841.1| lysyl-tRNA synthetase [Escherichia coli KTE165]
gi|431437734|gb|ELH19242.1| lysyl-tRNA synthetase [Escherichia coli KTE190]
gi|431439482|gb|ELH20816.1| lysyl-tRNA synthetase [Escherichia coli KTE173]
gi|431442569|gb|ELH23658.1| lysyl-tRNA synthetase [Escherichia coli KTE175]
gi|431461047|gb|ELH41315.1| lysyl-tRNA synthetase [Escherichia coli KTE183]
gi|431466197|gb|ELH46274.1| lysyl-tRNA synthetase [Escherichia coli KTE197]
gi|431471816|gb|ELH51708.1| lysyl-tRNA synthetase [Escherichia coli KTE202]
gi|431480192|gb|ELH59919.1| lysyl-tRNA synthetase [Escherichia coli KTE207]
gi|431487064|gb|ELH66709.1| lysyl-tRNA synthetase [Escherichia coli KTE209]
gi|431490353|gb|ELH69970.1| lysyl-tRNA synthetase [Escherichia coli KTE211]
gi|431492943|gb|ELH72540.1| lysyl-tRNA synthetase [Escherichia coli KTE217]
gi|431497884|gb|ELH77101.1| lysyl-tRNA synthetase [Escherichia coli KTE215]
gi|431503352|gb|ELH82087.1| lysyl-tRNA synthetase [Escherichia coli KTE218]
gi|431506556|gb|ELH85151.1| lysyl-tRNA synthetase [Escherichia coli KTE223]
gi|431512096|gb|ELH90224.1| lysyl-tRNA synthetase [Escherichia coli KTE227]
gi|431522048|gb|ELH99283.1| lysyl-tRNA synthetase [Escherichia coli KTE229]
gi|431528841|gb|ELI05546.1| lysyl-tRNA synthetase [Escherichia coli KTE104]
gi|431529007|gb|ELI05711.1| lysyl-tRNA synthetase [Escherichia coli KTE105]
gi|431533350|gb|ELI09850.1| lysyl-tRNA synthetase [Escherichia coli KTE106]
gi|431541468|gb|ELI16907.1| lysyl-tRNA synthetase [Escherichia coli KTE109]
gi|431548282|gb|ELI22564.1| lysyl-tRNA synthetase [Escherichia coli KTE112]
gi|431550256|gb|ELI24253.1| lysyl-tRNA synthetase [Escherichia coli KTE113]
gi|431563134|gb|ELI36367.1| lysyl-tRNA synthetase [Escherichia coli KTE120]
gi|431567978|gb|ELI40970.1| lysyl-tRNA synthetase [Escherichia coli KTE124]
gi|431568249|gb|ELI41237.1| lysyl-tRNA synthetase [Escherichia coli KTE122]
gi|431579624|gb|ELI52204.1| lysyl-tRNA synthetase [Escherichia coli KTE125]
gi|431581249|gb|ELI53702.1| lysyl-tRNA synthetase [Escherichia coli KTE128]
gi|431585253|gb|ELI57205.1| lysyl-tRNA synthetase [Escherichia coli KTE129]
gi|431595098|gb|ELI65172.1| lysyl-tRNA synthetase [Escherichia coli KTE131]
gi|431599926|gb|ELI69604.1| lysyl-tRNA synthetase [Escherichia coli KTE133]
gi|431603547|gb|ELI72972.1| lysyl-tRNA synthetase [Escherichia coli KTE137]
gi|431614144|gb|ELI83303.1| lysyl-tRNA synthetase [Escherichia coli KTE139]
gi|431617692|gb|ELI86703.1| lysyl-tRNA synthetase [Escherichia coli KTE145]
gi|431625466|gb|ELI94046.1| lysyl-tRNA synthetase [Escherichia coli KTE148]
gi|431626690|gb|ELI95234.1| lysyl-tRNA synthetase [Escherichia coli KTE150]
gi|431632755|gb|ELJ01042.1| lysyl-tRNA synthetase [Escherichia coli KTE153]
gi|431640720|gb|ELJ08475.1| lysyl-tRNA synthetase [Escherichia coli KTE157]
gi|431642811|gb|ELJ10518.1| lysyl-tRNA synthetase [Escherichia coli KTE160]
gi|431658335|gb|ELJ25249.1| lysyl-tRNA synthetase [Escherichia coli KTE167]
gi|431659707|gb|ELJ26597.1| lysyl-tRNA synthetase [Escherichia coli KTE168]
gi|431669260|gb|ELJ35687.1| lysyl-tRNA synthetase [Escherichia coli KTE174]
gi|431672362|gb|ELJ38633.1| lysyl-tRNA synthetase [Escherichia coli KTE176]
gi|431685208|gb|ELJ50783.1| lysyl-tRNA synthetase [Escherichia coli KTE179]
gi|431686113|gb|ELJ51679.1| lysyl-tRNA synthetase [Escherichia coli KTE180]
gi|431690064|gb|ELJ55548.1| lysyl-tRNA synthetase [Escherichia coli KTE232]
gi|431699218|gb|ELJ64225.1| lysyl-tRNA synthetase [Escherichia coli KTE82]
gi|431704006|gb|ELJ68640.1| lysyl-tRNA synthetase [Escherichia coli KTE88]
gi|431704166|gb|ELJ68798.1| lysyl-tRNA synthetase [Escherichia coli KTE85]
gi|431718018|gb|ELJ82099.1| lysyl-tRNA synthetase [Escherichia coli KTE95]
gi|431719373|gb|ELJ83432.1| lysyl-tRNA synthetase [Escherichia coli KTE94]
gi|431729128|gb|ELJ92767.1| lysyl-tRNA synthetase [Escherichia coli KTE97]
gi|431733670|gb|ELJ97105.1| lysyl-tRNA synthetase [Escherichia coli KTE99]
gi|432349280|gb|ELL43709.1| lysyl-tRNA synthetase [Escherichia coli J96]
gi|441607097|emb|CCP99392.1| Lysyl-tRNA synthetase (class II) [Escherichia coli O10:K5(L):H4
str. ATCC 23506]
gi|441714112|emb|CCQ05836.1| Lysyl-tRNA synthetase (class II) [Escherichia coli Nissle 1917]
gi|449315734|gb|EMD05870.1| lysyl-tRNA synthetase [Escherichia coli O08]
gi|449317487|gb|EMD07575.1| lysyl-tRNA synthetase [Escherichia coli S17]
gi|449318633|gb|EMD08697.1| lysyl-tRNA synthetase [Escherichia coli SEPT362]
Length = 505
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 233/440 (52%), Positives = 312/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDILGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+S IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +G T
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y LDF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 EVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q+ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFLDQVAAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|292900473|ref|YP_003539842.1| lysyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
gi|291200321|emb|CBJ47449.1| lysyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
gi|312171252|emb|CBX79511.1| lysyl-tRNA synthetase [Erwinia amylovora ATCC BAA-2158]
Length = 506
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 232/440 (52%), Positives = 320/440 (72%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY+S + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVSRDDLAEGIYNEQFKKWDLGDILGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI S L+L+TK+LRPLP+KF L++QE +YR RY+DLI N+++R FK R+Q
Sbjct: 130 KTKTGELSIHCSELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANDDSRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR+FM DFMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 IMAGIRNFMVGRDFMEVETPMMQAIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF+++FEIN+NFRNEGISPRHNPEFTM+E Y AY +Y L++ TE + + + + +G+T
Sbjct: 250 GGFDRVFEINRNFRNEGISPRHNPEFTMMELYMAYADYEDLIELTESLFRTLAQNVLGST 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y + DF + F KLT+ EAI KY PQ + DL + F KS + N +K
Sbjct: 310 LVPYGDQQFDFGQPFAKLTMKEAILKYRPQTDLADLAD--FDKSVAIAQSLGINVEKSW- 366
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
L + + + +FEET E L PT+IT YP E+SPLAR++++ + IT+RFE FI G EI
Sbjct: 367 GLGRVVTE--IFEETAEEHLIQPTFITEYPAEVSPLARRNDV-DPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND ++Q+ RF Q++ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAQDQAERFLQQVNAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP LR
Sbjct: 483 VMLFTNSHTIRDVILFPALR 502
>gi|421728097|ref|ZP_16167253.1| lysyl-tRNA ligase [Klebsiella oxytoca M5al]
gi|410371057|gb|EKP25782.1| lysyl-tRNA ligase [Klebsiella oxytoca M5al]
Length = 505
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 229/440 (52%), Positives = 312/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDII A+G LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLAEGVYNEQFKKWDLGDIIAARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI NE +R FK R+Q
Sbjct: 130 KTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNEESRHTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++++R FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILATMRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + +G T
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQTVLGKT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y ++ DF K FEKLT+ EAIKKY P+ DL N K+ + I + L
Sbjct: 310 EVPYGDQVFDFGKPFEKLTMREAIKKYRPETEMADLDNFDAAKALAESIGIHVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF++Q++ K + E + +YD DY+ ALEYG+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFQDQVNAKAAGDDE-AMFYDEDYVTALEYGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|161506412|ref|YP_001573524.1| lysyl-tRNA synthetase [Salmonella enterica subsp. arizonae serovar
62:z4,z23:- str. RSK2980]
gi|189082966|sp|A9MRI4.1|SYK_SALAR RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|160867759|gb|ABX24382.1| hypothetical protein SARI_04610 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 505
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 230/440 (52%), Positives = 313/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDILGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI S L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R++
Sbjct: 130 KTKTGELSIHCSELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKTRSK 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAGIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +G T
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGNT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y + DF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 QVPYGDEVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF++Q++ K + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFQDQVNAKAAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|423122022|ref|ZP_17109706.1| lysyl-tRNA synthetase [Klebsiella oxytoca 10-5246]
gi|376393330|gb|EHT05990.1| lysyl-tRNA synthetase [Klebsiella oxytoca 10-5246]
Length = 505
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 233/440 (52%), Positives = 310/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDII A+G LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDIIAARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +RK FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRKTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM FMEVETP++ PGGA A+PFITHHN+L+M M+LRIAPELYLKRL++
Sbjct: 190 ILAGIRQFMVGRGFMEVETPMMQVIPGGASARPFITHHNALDMDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +G T
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGNT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y + DF K FEKLT+ EAIKKY P+ DL N K+ + I + L
Sbjct: 310 AVPYGDQTFDFGKPFEKLTMREAIKKYRPETEMADLDNFDSAKAIAESIGIHVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR+ N +N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARR-NDQNPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF++Q++ K + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFQDQVNAKAAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|417156942|ref|ZP_11994566.1| lysine--tRNA ligase [Escherichia coli 96.0497]
gi|417582381|ref|ZP_12233182.1| lysyl-tRNA synthetase [Escherichia coli STEC_B2F1]
gi|345335838|gb|EGW68275.1| lysyl-tRNA synthetase [Escherichia coli STEC_B2F1]
gi|386165692|gb|EIH32212.1| lysine--tRNA ligase [Escherichia coli 96.0497]
Length = 505
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 234/440 (53%), Positives = 312/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDILGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+S IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +G T
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y LDF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 EVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR+++I N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARRNDI-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q+ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFLDQVAAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|224584829|ref|YP_002638627.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|254782479|sp|C0PY12.1|SYK_SALPC RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|224469356|gb|ACN47186.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
Length = 505
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 230/440 (52%), Positives = 313/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDILGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R++
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKTRSK 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAGIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y + DF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 QVPYGDEVFDFGKPFEKLTMREAIKKYRPETDMADLGNFDSAKAVAESIGIHVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q++ K + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFLDQVNAKAAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|422828254|ref|ZP_16876426.1| lysyl-tRNA synthetase [Escherichia coli B093]
gi|371614956|gb|EHO03416.1| lysyl-tRNA synthetase [Escherichia coli B093]
Length = 505
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 233/440 (52%), Positives = 312/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDILGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+S IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +G T
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y LDF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 EVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q+ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFLDQVAAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|407793362|ref|ZP_11140396.1| lysyl-tRNA ligase [Idiomarina xiamenensis 10-D-4]
gi|407214985|gb|EKE84826.1| lysyl-tRNA ligase [Idiomarina xiamenensis 10-D-4]
Length = 502
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 225/440 (51%), Positives = 315/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF LQD SG +IQ+Y++ + + + Y + FK +D+GDIIGA G LF
Sbjct: 72 MTRRIMGKASFATLQDMSG-----RIQVYVARDNLAEGFYNEQFKKWDLGDIIGASGVLF 126
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KTNTGELS++V ++L+TK+LRPLP+KF L++QE +YR RY+DLI NE +R F R++
Sbjct: 127 KTNTGELSVQVDDIRLLTKALRPLPDKFHGLADQETRYRQRYLDLITNEESRNTFVVRSK 186
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
++ IR F+ DF+EVETP++ PGGA A+PF+THHN+L+M++FLRIAPELYLKRL++
Sbjct: 187 VVDYIRRFLSAQDFLEVETPMMQTIPGGASARPFVTHHNALDMQLFLRIAPELYLKRLVV 246
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY Y +Y LM TE M++ + + +G+T
Sbjct: 247 GGFEKVFEINRNFRNEGLSTRHNPEFTMLEFYWGYADYHDLMNLTESMLRGMTQEILGST 306
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
QG DF + F ++T++EAI + P +E L++ K+ +K+ K L
Sbjct: 307 TFSSQGVDYDFGQPFTRMTVLEAILAHLPDSDEAQLKDLQSAKALAEKLGIKVQASWGLG 366
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+Q+ +FEE E KL PT+IT YP E+SPLAR+ N ++ +T+RFE F G E+
Sbjct: 367 K-----IQIEIFEEVAEHKLIQPTFITAYPAEVSPLARR-NDDDPFVTDRFEFFAGGREL 420
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
ANGFSELND E+Q+ RF++Q+ K E + + +YD DYI ALE+GMPP +G GIG+DRL
Sbjct: 421 ANGFSELNDAEDQAERFQHQVQQK-EAGDDEAMFYDDDYITALEHGMPPTAGEGIGIDRL 479
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+MLLT+S +IRDV+LFPH+R
Sbjct: 480 VMLLTDSPSIRDVLLFPHMR 499
>gi|421775552|ref|ZP_16212161.1| lysyl-tRNA synthetase [Escherichia coli AD30]
gi|408459438|gb|EKJ83220.1| lysyl-tRNA synthetase [Escherichia coli AD30]
Length = 505
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 233/440 (52%), Positives = 312/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDILGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+S IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +G T
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y LDF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 EVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q+ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAHRFLDQVAAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|444926544|ref|ZP_21245825.1| lysine--tRNA ligase [Escherichia coli 09BKT078844]
gi|444538291|gb|ELV18166.1| lysine--tRNA ligase [Escherichia coli 09BKT078844]
Length = 505
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 233/440 (52%), Positives = 313/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 75 MPRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDILGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+S IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +G T
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y LDF K FEKLT+ EAIKKY P+ + DL N K+ ++ I + L
Sbjct: 310 EVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIVESIGIHVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q+ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFLDQVAAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|11513774|pdb|1BBU|A Chain A, Lysyl-Trna Synthetase (Lyss) Complexed With Lysine
gi|11513776|pdb|1BBW|A Chain A, Lysyl-Trna Synthetase (Lyss)
Length = 504
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 233/440 (52%), Positives = 312/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 74 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDILGAKGKLF 128
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 129 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQ 188
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+S IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 189 ILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAPELYLKRLVV 248
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +G T
Sbjct: 249 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKT 308
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y LDF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 309 EVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLG 368
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 369 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 422
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q+ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 423 GNGFSELNDAEDQAQRFLDQVAAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 481
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 482 VMLFTNSHTIRDVILFPAMR 501
>gi|385870371|gb|AFI88891.1| Lysyl-tRNA synthetase [Pectobacterium sp. SCC3193]
Length = 502
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 229/440 (52%), Positives = 313/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY+S + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 72 MTRRIMGKASFVTLQDVGG-----RIQLYVSRDDLAEGIYNEQFKKWDLGDILGARGKLF 126
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L++QE +YR RY+DLI N+ +R F+ R+
Sbjct: 127 KTKTGELSIHCTELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANDESRNTFRIRSN 186
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
++++IR FM + FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 187 VMAAIRRFMVDHGFMEVETPMMQAIPGGASARPFITHHNALDIDMYLRIAPELYLKRLVV 246
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGISPRHNPEFTM+E Y AY +Y L+ TE + + + D +G+T
Sbjct: 247 GGFERVFEINRNFRNEGISPRHNPEFTMMELYMAYADYKDLIVLTENLFRTLTQDVLGST 306
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y + DF K FEKLT+ EAI KY P+ N DL + + + K + L
Sbjct: 307 TVVYGDQTFDFGKPFEKLTMREAICKYRPETNVADLDCLEKATAIAQSLGIKIEKSWGLG 366
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEET E+ L PT+IT YP E+SPLAR+ N +N IT+RFE FI G EI
Sbjct: 367 RIVTEI-----FEETAESSLIQPTFITEYPAEVSPLARR-NDQNPEITDRFEFFIGGREI 420
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF Q++ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 421 GNGFSELNDAEDQAERFAQQVNAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 479
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 480 VMLFTNSHTIRDVILFPAMR 499
>gi|415839618|ref|ZP_11521360.1| lysyl-tRNA synthetase [Escherichia coli RN587/1]
gi|417281646|ref|ZP_12068946.1| lysine--tRNA ligase [Escherichia coli 3003]
gi|425279245|ref|ZP_18670478.1| lysine--tRNA ligase [Escherichia coli ARS4.2123]
gi|323188712|gb|EFZ73997.1| lysyl-tRNA synthetase [Escherichia coli RN587/1]
gi|386245975|gb|EII87705.1| lysine--tRNA ligase [Escherichia coli 3003]
gi|408199889|gb|EKI25077.1| lysine--tRNA ligase [Escherichia coli ARS4.2123]
Length = 505
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 233/440 (52%), Positives = 312/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLLEGVYNEQFKKWDLGDILGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+S IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +G T
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y LDF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 EVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q+ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFLDQVAAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|378956655|ref|YP_005214142.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Gallinarum/pullorum str. RKS5078]
gi|438148733|ref|ZP_20876397.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Pullorum str. ATCC 9120]
gi|357207266|gb|AET55312.1| Lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Gallinarum/pullorum str. RKS5078]
gi|434938151|gb|ELL45166.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Pullorum str. ATCC 9120]
Length = 505
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 230/440 (52%), Positives = 313/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDILGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R++
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKTRSK 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAGIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y + DF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 QVPYGDEVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q++ K + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFLDQVNAKAAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|421081110|ref|ZP_15542024.1| Lysine--tRNA ligase 1 [Pectobacterium wasabiae CFBP 3304]
gi|401704120|gb|EJS94329.1| Lysine--tRNA ligase 1 [Pectobacterium wasabiae CFBP 3304]
Length = 505
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 228/440 (51%), Positives = 314/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY+S + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVSRDDLAEGIYNEQFKKWDLGDILGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L++QE +YR RY+DLI N+ +R F+ R+
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANDESRNTFRIRSN 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
++++IR FM + FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 VMAAIRRFMVDHGFMEVETPMMQVIPGGASARPFITHHNALDIDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEG+SPRHNPEFTM+E Y AY +Y L+ TE + + + D +G+T
Sbjct: 250 GGFERVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYKDLIVLTENLFRTLTQDVLGST 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y + DF K FEKLT+ EAI KY P+ N DL + + + + K + L
Sbjct: 310 TVVYGDQTFDFGKPFEKLTMREAICKYRPETNVADLDDLEKATAIAQSLGIKIEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEET E+ L PT+IT YP E+SPLAR+ N +N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEETAESSLIQPTFITEYPAEVSPLARR-NDQNPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF Q++ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAERFAQQVNAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|432519032|ref|ZP_19756214.1| lysyl-tRNA synthetase [Escherichia coli KTE228]
gi|433159966|ref|ZP_20344796.1| lysyl-tRNA synthetase [Escherichia coli KTE177]
gi|431049429|gb|ELD59391.1| lysyl-tRNA synthetase [Escherichia coli KTE228]
gi|431675901|gb|ELJ42027.1| lysyl-tRNA synthetase [Escherichia coli KTE177]
Length = 505
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 233/440 (52%), Positives = 312/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDILGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIYCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+S IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +G T
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y LDF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 EVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q+ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFLDQVAAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|193063477|ref|ZP_03044566.1| lysyl-tRNA synthetase LysS [Escherichia coli E22]
gi|192930754|gb|EDV83359.1| lysyl-tRNA synthetase LysS [Escherichia coli E22]
Length = 505
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 234/440 (53%), Positives = 311/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDILGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+S IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +G T
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y LDF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 EVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR+++I N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARRNDI-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF Q+ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFLEQVAAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|16766341|ref|NP_461956.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|56414986|ref|YP_152061.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|62181550|ref|YP_217967.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|161615987|ref|YP_001589952.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Paratyphi B str. SPB7]
gi|167550076|ref|ZP_02343833.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|167994103|ref|ZP_02575195.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|168231145|ref|ZP_02656203.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|168236099|ref|ZP_02661157.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|168242827|ref|ZP_02667759.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|168261798|ref|ZP_02683771.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|168463792|ref|ZP_02697709.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|168823069|ref|ZP_02835069.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|194443381|ref|YP_002042292.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|194450411|ref|YP_002047025.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194471972|ref|ZP_03077956.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194472758|ref|ZP_03078742.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194736687|ref|YP_002115990.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197250263|ref|YP_002147953.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|197265303|ref|ZP_03165377.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197363915|ref|YP_002143552.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|198242473|ref|YP_002217018.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|200387283|ref|ZP_03213895.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204928085|ref|ZP_03219285.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205353964|ref|YP_002227765.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|207858303|ref|YP_002244954.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|213161325|ref|ZP_03347035.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhi str. E00-7866]
gi|213425819|ref|ZP_03358569.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhi str. E02-1180]
gi|213583165|ref|ZP_03364991.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhi str. E98-0664]
gi|238909839|ref|ZP_04653676.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Tennessee str. CDC07-0191]
gi|374979055|ref|ZP_09720394.1| Lysyl-tRNA synthetase class II [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|375002791|ref|ZP_09727131.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Infantis str. SARB27]
gi|375115885|ref|ZP_09761055.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SCSA50]
gi|375120518|ref|ZP_09765685.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Dublin str. SD3246]
gi|375124828|ref|ZP_09769992.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Gallinarum str. SG9]
gi|378446393|ref|YP_005234025.1| LysRS [Salmonella enterica subsp. enterica serovar Typhimurium str.
D23580]
gi|378451815|ref|YP_005239175.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|378700948|ref|YP_005182905.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|378985632|ref|YP_005248788.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|378990360|ref|YP_005253524.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. UK-1]
gi|379702297|ref|YP_005244025.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. ST4/74]
gi|383497704|ref|YP_005398393.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. 798]
gi|386592744|ref|YP_006089144.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. B182]
gi|409246735|ref|YP_006887439.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|416426418|ref|ZP_11692913.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|416428991|ref|ZP_11694204.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|416439044|ref|ZP_11699921.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|416446122|ref|ZP_11704877.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|416451514|ref|ZP_11708264.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|416459906|ref|ZP_11714351.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|416471911|ref|ZP_11719442.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|416474303|ref|ZP_11720154.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|416492987|ref|ZP_11727774.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|416500968|ref|ZP_11731830.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|416504121|ref|ZP_11733068.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB31]
gi|416515596|ref|ZP_11738723.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. ATCC BAA710]
gi|416527235|ref|ZP_11743073.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. LQC 10]
gi|416533833|ref|ZP_11746651.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB30]
gi|416546843|ref|ZP_11754237.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|416549566|ref|ZP_11755409.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 29N]
gi|416562088|ref|ZP_11761899.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 42N]
gi|416568583|ref|ZP_11764935.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 4441 H]
gi|416577774|ref|ZP_11770060.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|416583948|ref|ZP_11773688.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|416591716|ref|ZP_11778660.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|416598236|ref|ZP_11782623.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|416606752|ref|ZP_11787993.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|416610651|ref|ZP_11790258.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|416620237|ref|ZP_11795595.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|416634726|ref|ZP_11802706.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|416641874|ref|ZP_11805693.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|416647178|ref|ZP_11808177.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|416657071|ref|ZP_11813527.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|416670191|ref|ZP_11819905.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|416675044|ref|ZP_11821367.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|416696783|ref|ZP_11828035.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|416706069|ref|ZP_11831328.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|416712252|ref|ZP_11835963.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|416718448|ref|ZP_11840556.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|416723197|ref|ZP_11843962.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|416733184|ref|ZP_11850275.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|416737561|ref|ZP_11852714.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|416748635|ref|ZP_11858892.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|416754675|ref|ZP_11861467.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|416761669|ref|ZP_11865720.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|416771202|ref|ZP_11872467.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
gi|417328571|ref|ZP_12113659.1| Lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Adelaide str. A4-669]
gi|417336202|ref|ZP_12118755.1| Lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Alachua str. R6-377]
gi|417343601|ref|ZP_12124135.1| Lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Baildon str. R6-199]
gi|417352093|ref|ZP_12129401.1| Lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Gaminara str. A4-567]
gi|417360554|ref|ZP_12134649.1| Lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Give str. S5-487]
gi|417367807|ref|ZP_12139565.1| Lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Hvittingfoss str. A4-620]
gi|417375718|ref|ZP_12145097.1| Lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Inverness str. R8-3668]
gi|417385441|ref|ZP_12150499.1| Lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Johannesburg str. S5-703]
gi|417393331|ref|ZP_12155867.1| Lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Minnesota str. A4-603]
gi|417469672|ref|ZP_12165983.1| Lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. S5-403]
gi|417480455|ref|ZP_12171860.1| Lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Rubislaw str. A4-653]
gi|417513342|ref|ZP_12177415.1| Lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Senftenberg str. A4-543]
gi|417520405|ref|ZP_12182322.1| Lysyl-tRNA synthetase (class II) [Salmonella enterica subsp.
enterica serovar Uganda str. R8-3404]
gi|417533587|ref|ZP_12187586.1| Lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Urbana str. R8-2977]
gi|417541600|ref|ZP_12193281.1| Lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Wandsworth str. A4-580]
gi|418481887|ref|ZP_13050910.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 80959-06]
gi|418490345|ref|ZP_13056890.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035278]
gi|418495871|ref|ZP_13062309.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035318]
gi|418498687|ref|ZP_13065101.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035320]
gi|418505541|ref|ZP_13071887.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035321]
gi|418509955|ref|ZP_13076246.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035327]
gi|418512378|ref|ZP_13078621.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Pomona str. ATCC 10729]
gi|418524647|ref|ZP_13090632.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008286]
gi|418760813|ref|ZP_13316965.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35185]
gi|418766201|ref|ZP_13322280.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35199]
gi|418771526|ref|ZP_13327533.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21539]
gi|418773705|ref|ZP_13329678.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 33953]
gi|418778489|ref|ZP_13334399.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35188]
gi|418783334|ref|ZP_13339181.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21559]
gi|418788817|ref|ZP_13344610.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19447]
gi|418795226|ref|ZP_13350935.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19449]
gi|418797342|ref|ZP_13353028.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19567]
gi|418801269|ref|ZP_13356906.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35202]
gi|418806243|ref|ZP_13361815.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21550]
gi|418810402|ref|ZP_13365942.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22513]
gi|418818019|ref|ZP_13373498.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21538]
gi|418823088|ref|ZP_13378497.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22425]
gi|418828743|ref|ZP_13383760.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22462]
gi|418830983|ref|ZP_13385941.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM N18486]
gi|418837284|ref|ZP_13392159.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM N1543]
gi|418842547|ref|ZP_13397357.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21554]
gi|418848013|ref|ZP_13402753.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 37978]
gi|418856176|ref|ZP_13410824.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19593]
gi|418857515|ref|ZP_13412142.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19470]
gi|418862590|ref|ZP_13417129.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19536]
gi|418869745|ref|ZP_13424178.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 4176]
gi|419731292|ref|ZP_14258205.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41579]
gi|419735747|ref|ZP_14262620.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41563]
gi|419736864|ref|ZP_14263688.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41573]
gi|419741911|ref|ZP_14268589.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41566]
gi|419748295|ref|ZP_14274793.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41565]
gi|419787026|ref|ZP_14312741.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. Levine 1]
gi|419793420|ref|ZP_14319043.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. Levine 15]
gi|421360625|ref|ZP_15810901.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 622731-39]
gi|421363399|ref|ZP_15813641.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639016-6]
gi|421369723|ref|ZP_15819898.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 640631]
gi|421374166|ref|ZP_15824297.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-0424]
gi|421378897|ref|ZP_15828976.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-6]
gi|421383433|ref|ZP_15833471.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 485549-17]
gi|421384919|ref|ZP_15834942.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-22]
gi|421389438|ref|ZP_15839421.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-70]
gi|421396724|ref|ZP_15846649.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-26]
gi|421399503|ref|ZP_15849398.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-37]
gi|421406007|ref|ZP_15855832.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-46]
gi|421408465|ref|ZP_15858264.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-50]
gi|421414904|ref|ZP_15864640.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-1427]
gi|421417493|ref|ZP_15867203.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-2659]
gi|421420832|ref|ZP_15870508.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 78-1757]
gi|421428477|ref|ZP_15878088.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22510-1]
gi|421430920|ref|ZP_15880506.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 8b-1]
gi|421435651|ref|ZP_15885187.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648905 5-18]
gi|421440072|ref|ZP_15889552.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 6-18]
gi|421443869|ref|ZP_15893308.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-3079]
gi|421449340|ref|ZP_15898724.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 58-6482]
gi|421572918|ref|ZP_16018563.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00322]
gi|421576897|ref|ZP_16022487.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00325]
gi|421580223|ref|ZP_16025781.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00326]
gi|421583247|ref|ZP_16028771.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00328]
gi|421885590|ref|ZP_16316781.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Senftenberg str. SS209]
gi|422027257|ref|ZP_16373600.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm1]
gi|422032292|ref|ZP_16378406.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm2]
gi|423141533|ref|ZP_17129171.1| lysyl-tRNA synthetase [Salmonella enterica subsp. houtenae str.
ATCC BAA-1581]
gi|427553995|ref|ZP_18928897.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm8]
gi|427571549|ref|ZP_18933612.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm9]
gi|427615841|ref|ZP_18943301.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm4]
gi|427639687|ref|ZP_18948181.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm6]
gi|427657272|ref|ZP_18952926.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm10]
gi|427662590|ref|ZP_18957891.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm11]
gi|427676213|ref|ZP_18962706.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm12]
gi|427800250|ref|ZP_18968032.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm5]
gi|436625752|ref|ZP_20515074.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22704]
gi|436650314|ref|ZP_20516739.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE30663]
gi|436799698|ref|ZP_20523984.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS44]
gi|436807450|ref|ZP_20527493.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1882]
gi|436818341|ref|ZP_20534974.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1884]
gi|436832564|ref|ZP_20536854.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1594]
gi|436853090|ref|ZP_20543115.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1566]
gi|436861122|ref|ZP_20548306.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1580]
gi|436867649|ref|ZP_20552803.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1543]
gi|436872994|ref|ZP_20555876.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1441]
gi|436880336|ref|ZP_20560095.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1810]
gi|436891619|ref|ZP_20566319.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1558]
gi|436899475|ref|ZP_20570886.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1018]
gi|436902985|ref|ZP_20573449.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1010]
gi|436914931|ref|ZP_20579778.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1729]
gi|436919630|ref|ZP_20582411.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0895]
gi|436928922|ref|ZP_20588128.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0899]
gi|436938466|ref|ZP_20593253.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1457]
gi|436945974|ref|ZP_20597802.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1747]
gi|436955437|ref|ZP_20602312.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0968]
gi|436966169|ref|ZP_20606838.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1444]
gi|436969440|ref|ZP_20608437.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1445]
gi|436983790|ref|ZP_20614164.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1559]
gi|436993510|ref|ZP_20618303.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1565]
gi|437004954|ref|ZP_20622184.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1808]
gi|437018630|ref|ZP_20626835.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1811]
gi|437027505|ref|ZP_20630394.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0956]
gi|437042986|ref|ZP_20636499.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1455]
gi|437050660|ref|ZP_20640805.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1575]
gi|437061892|ref|ZP_20647258.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1725]
gi|437066808|ref|ZP_20649870.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1745]
gi|437073966|ref|ZP_20653408.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1791]
gi|437083051|ref|ZP_20658794.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1795]
gi|437097792|ref|ZP_20665247.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 576709]
gi|437110577|ref|ZP_20667923.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 635290-58]
gi|437125134|ref|ZP_20673796.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-16]
gi|437129535|ref|ZP_20676011.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-19]
gi|437141753|ref|ZP_20683437.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-2]
gi|437146164|ref|ZP_20685953.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-9]
gi|437153350|ref|ZP_20690456.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629163]
gi|437159847|ref|ZP_20694245.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE15-1]
gi|437169308|ref|ZP_20699701.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_N202]
gi|437175835|ref|ZP_20703011.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_56-3991]
gi|437184496|ref|ZP_20708361.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_76-3618]
gi|437264740|ref|ZP_20720016.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_81-2490]
gi|437269401|ref|ZP_20722644.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL909]
gi|437277612|ref|ZP_20726971.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL913]
gi|437289248|ref|ZP_20731041.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_69-4941]
gi|437315872|ref|ZP_20737560.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 638970-15]
gi|437327705|ref|ZP_20740647.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 17927]
gi|437341773|ref|ZP_20744896.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS4]
gi|437378561|ref|ZP_20750065.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22558]
gi|437417529|ref|ZP_20753948.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 22-17]
gi|437445772|ref|ZP_20758494.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 40-18]
gi|437463376|ref|ZP_20763058.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 1-1]
gi|437481060|ref|ZP_20768765.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 4-1]
gi|437495894|ref|ZP_20773038.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642046 4-7]
gi|437509447|ref|ZP_20776586.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648898 4-5]
gi|437532942|ref|ZP_20781045.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648899 3-17]
gi|437567098|ref|ZP_20787369.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648900 1-16]
gi|437580495|ref|ZP_20791898.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 1-17]
gi|437592655|ref|ZP_20795204.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 39-2]
gi|437605078|ref|ZP_20799257.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648902 6-8]
gi|437619352|ref|ZP_20803504.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648903 1-6]
gi|437639635|ref|ZP_20807653.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648904 3-6]
gi|437665380|ref|ZP_20814531.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 653049 13-19]
gi|437686896|ref|ZP_20819451.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 8-1]
gi|437692272|ref|ZP_20821092.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 9-7]
gi|437705517|ref|ZP_20824987.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 42-20]
gi|437729778|ref|ZP_20830910.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 16-16]
gi|437771827|ref|ZP_20835686.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 76-2651]
gi|437808476|ref|ZP_20840181.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 33944]
gi|437833099|ref|ZP_20844537.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SARB17]
gi|437871986|ref|ZP_20848468.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 6.0562-1]
gi|438091056|ref|ZP_20860786.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 81-2625]
gi|438101714|ref|ZP_20864541.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 62-1976]
gi|438116284|ref|ZP_20870803.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 53-407]
gi|440764051|ref|ZP_20943085.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Agona str. SH11G1113]
gi|440765690|ref|ZP_20944704.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Agona str. SH11G1113]
gi|440770078|ref|ZP_20949032.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Agona str. SH08SF124]
gi|440772779|ref|ZP_20951682.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Agona str. SH10GFN094]
gi|445132606|ref|ZP_21382287.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9184]
gi|445145383|ref|ZP_21387345.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Dublin str. SL1438]
gi|445151258|ref|ZP_21390208.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Dublin str. HWS51]
gi|445171132|ref|ZP_21396043.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE8a]
gi|445197338|ref|ZP_21400734.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 20037]
gi|445219332|ref|ZP_21402714.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE10]
gi|445320040|ref|ZP_21412049.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 436]
gi|445335079|ref|ZP_21415397.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 18569]
gi|445343728|ref|ZP_21417191.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13-1]
gi|445357934|ref|ZP_21422359.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. PT23]
gi|452123143|ref|YP_007473391.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Javiana str. CFSAN001992]
gi|17865728|sp|P28354.3|SYK1_SALTY RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|75481018|sp|Q57K76.1|SYK_SALCH RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|81361439|sp|Q5PL30.1|SYK_SALPA RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|189082967|sp|A9N3L6.1|SYK_SALPB RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|226710925|sp|B5F5G4.1|SYK_SALA4 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|226710926|sp|B5FUF3.1|SYK_SALDC RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|226710927|sp|B5QXG7.1|SYK_SALEP RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|226710928|sp|B5RE01.1|SYK_SALG2 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|226710929|sp|B4T535.1|SYK_SALNS RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|238690649|sp|B4TGW0.1|SYK_SALHS RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|238690720|sp|B5BFK5.1|SYK_SALPK RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|238693697|sp|B4TUQ8.1|SYK_SALSV RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|16421590|gb|AAL21915.1| constitutive lysine tRNA synthetase [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|56129243|gb|AAV78749.1| lysyl tRNA synthetase (LysRS) [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|62129183|gb|AAX66886.1| lysine tRNA synthetase, constitutive [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|161365351|gb|ABX69119.1| hypothetical protein SPAB_03787 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194402044|gb|ACF62266.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194408715|gb|ACF68934.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194458336|gb|EDX47175.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194459122|gb|EDX47961.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194712189|gb|ACF91410.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|195633136|gb|EDX51550.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|197095392|emb|CAR60951.1| lysyl tRNA synthetase (LysRS) [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|197213966|gb|ACH51363.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197243558|gb|EDY26178.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197290865|gb|EDY30219.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|197936989|gb|ACH74322.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|199604381|gb|EDZ02926.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204322407|gb|EDZ07604.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205273745|emb|CAR38740.1| Lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|205324787|gb|EDZ12626.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205328003|gb|EDZ14767.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205334471|gb|EDZ21235.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|205338151|gb|EDZ24915.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|205340632|gb|EDZ27396.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|205349204|gb|EDZ35835.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|206710106|emb|CAR34461.1| Lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|261248172|emb|CBG26008.1| LysRS [Salmonella enterica subsp. enterica serovar Typhimurium str.
D23580]
gi|267995194|gb|ACY90079.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|301159596|emb|CBW19115.1| Lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|312914061|dbj|BAJ38035.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|320087469|emb|CBY97234.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|321225715|gb|EFX50769.1| Lysyl-tRNA synthetase class II [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|322613438|gb|EFY10379.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|322621030|gb|EFY17888.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|322624094|gb|EFY20928.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|322628167|gb|EFY24956.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|322633286|gb|EFY30028.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|322636136|gb|EFY32844.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|322639475|gb|EFY36163.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|322647593|gb|EFY44082.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|322648777|gb|EFY45224.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|322653832|gb|EFY50158.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|322657938|gb|EFY54206.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|322664041|gb|EFY60240.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|322668948|gb|EFY65099.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|322673058|gb|EFY69165.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|322677951|gb|EFY74014.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|322681127|gb|EFY77160.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|322687943|gb|EFY83910.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|322716031|gb|EFZ07602.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SCSA50]
gi|323131396|gb|ADX18826.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. ST4/74]
gi|323194861|gb|EFZ80048.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|323196612|gb|EFZ81760.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|323202688|gb|EFZ87728.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|323212623|gb|EFZ97440.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|323214894|gb|EFZ99642.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|323222625|gb|EGA06990.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|323225096|gb|EGA09348.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|323230618|gb|EGA14736.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|323235031|gb|EGA19117.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|323239070|gb|EGA23120.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|323244572|gb|EGA28578.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|323247187|gb|EGA31153.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|323253330|gb|EGA37159.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|323256363|gb|EGA40099.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|323262461|gb|EGA46017.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|323267443|gb|EGA50927.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|323269153|gb|EGA52608.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
gi|326624785|gb|EGE31130.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Dublin str. SD3246]
gi|326629078|gb|EGE35421.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Gallinarum str. SG9]
gi|332989907|gb|AEF08890.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. UK-1]
gi|353077479|gb|EHB43239.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Infantis str. SARB27]
gi|353567444|gb|EHC32648.1| Lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Adelaide str. A4-669]
gi|353567553|gb|EHC32725.1| Lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Gaminara str. A4-567]
gi|353568682|gb|EHC33508.1| Lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Alachua str. R6-377]
gi|353586371|gb|EHC45960.1| Lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Give str. S5-487]
gi|353588184|gb|EHC47294.1| Lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Hvittingfoss str. A4-620]
gi|353595424|gb|EHC52688.1| Lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Inverness str. R8-3668]
gi|353605820|gb|EHC60230.1| Lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Johannesburg str. S5-703]
gi|353609050|gb|EHC62463.1| Lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Minnesota str. A4-603]
gi|353626964|gb|EHC75382.1| Lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. S5-403]
gi|353636145|gb|EHC82270.1| Lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Rubislaw str. A4-653]
gi|353637065|gb|EHC82973.1| Lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Senftenberg str. A4-543]
gi|353644047|gb|EHC88100.1| Lysyl-tRNA synthetase (class II) [Salmonella enterica subsp.
enterica serovar Uganda str. R8-3404]
gi|353660396|gb|EHD00034.1| Lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Wandsworth str. A4-580]
gi|353660401|gb|EHD00038.1| Lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Urbana str. R8-2977]
gi|357955201|gb|EHJ81102.1| Lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Baildon str. R6-199]
gi|363556890|gb|EHL41103.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. LQC 10]
gi|363558497|gb|EHL42688.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB31]
gi|363563627|gb|EHL47694.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. ATCC BAA710]
gi|363567457|gb|EHL51455.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB30]
gi|363569515|gb|EHL53465.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 29N]
gi|363573404|gb|EHL57287.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 42N]
gi|363577928|gb|EHL61747.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 4441 H]
gi|366058387|gb|EHN22676.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035318]
gi|366064620|gb|EHN28817.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 80959-06]
gi|366065986|gb|EHN30162.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035278]
gi|366067848|gb|EHN31996.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035321]
gi|366073439|gb|EHN37512.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035320]
gi|366077555|gb|EHN41569.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035327]
gi|366083885|gb|EHN47801.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Pomona str. ATCC 10729]
gi|366830621|gb|EHN57491.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|372207506|gb|EHP21005.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008286]
gi|379050705|gb|EHY68597.1| lysyl-tRNA synthetase [Salmonella enterica subsp. houtenae str.
ATCC BAA-1581]
gi|379984858|emb|CCF89054.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Senftenberg str. SS209]
gi|380464525|gb|AFD59928.1| Lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. 798]
gi|381291473|gb|EIC32710.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41579]
gi|381294071|gb|EIC35211.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41563]
gi|381306903|gb|EIC47769.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41573]
gi|381314720|gb|EIC55487.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41565]
gi|381315278|gb|EIC56041.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41566]
gi|383799785|gb|AFH46867.1| Lysyl-tRNA synthetase (class II) [Salmonella enterica subsp.
enterica serovar Heidelberg str. B182]
gi|392617399|gb|EIW99824.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. Levine 15]
gi|392620969|gb|EIX03335.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. Levine 1]
gi|392734054|gb|EIZ91245.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21539]
gi|392738919|gb|EIZ96059.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35199]
gi|392741534|gb|EIZ98630.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35185]
gi|392752745|gb|EJA09685.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 33953]
gi|392755698|gb|EJA12607.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35188]
gi|392757182|gb|EJA14072.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21559]
gi|392759368|gb|EJA16221.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19449]
gi|392762483|gb|EJA19298.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19447]
gi|392768781|gb|EJA25527.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19567]
gi|392780990|gb|EJA37641.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35202]
gi|392781350|gb|EJA37991.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22513]
gi|392782860|gb|EJA39490.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21550]
gi|392785982|gb|EJA42539.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22425]
gi|392786431|gb|EJA42987.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21538]
gi|392788871|gb|EJA45398.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22462]
gi|392799360|gb|EJA55619.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM N1543]
gi|392800179|gb|EJA56417.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM N18486]
gi|392807118|gb|EJA63202.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21554]
gi|392820526|gb|EJA76376.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19593]
gi|392824072|gb|EJA79863.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 37978]
gi|392833987|gb|EJA89597.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19536]
gi|392834989|gb|EJA90589.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19470]
gi|392836208|gb|EJA91796.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 4176]
gi|395981192|gb|EJH90414.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 622731-39]
gi|395981846|gb|EJH91067.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 640631]
gi|395987860|gb|EJH97022.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639016-6]
gi|395994290|gb|EJI03366.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-0424]
gi|395995232|gb|EJI04297.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-6]
gi|395995667|gb|EJI04731.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 485549-17]
gi|396009178|gb|EJI18111.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-26]
gi|396016997|gb|EJI25863.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-70]
gi|396018551|gb|EJI27413.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-22]
gi|396022235|gb|EJI31049.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-46]
gi|396027597|gb|EJI36360.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-37]
gi|396027880|gb|EJI36642.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-50]
gi|396034939|gb|EJI43620.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-1427]
gi|396042328|gb|EJI50950.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-2659]
gi|396043877|gb|EJI52475.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 78-1757]
gi|396048512|gb|EJI57061.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22510-1]
gi|396054746|gb|EJI63238.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 8b-1]
gi|396056063|gb|EJI64539.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648905 5-18]
gi|396068207|gb|EJI76555.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 6-18]
gi|396069500|gb|EJI77838.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-3079]
gi|396070637|gb|EJI78965.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 58-6482]
gi|402514994|gb|EJW22409.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00322]
gi|402516781|gb|EJW24189.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00325]
gi|402519979|gb|EJW27333.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00326]
gi|402532173|gb|EJW39370.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00328]
gi|414015054|gb|EKS98881.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm1]
gi|414015905|gb|EKS99695.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm8]
gi|414016582|gb|EKT00345.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm2]
gi|414029332|gb|EKT12492.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm9]
gi|414033933|gb|EKT16874.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm4]
gi|414044165|gb|EKT26621.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm6]
gi|414044882|gb|EKT27312.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm10]
gi|414049634|gb|EKT31833.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm11]
gi|414057294|gb|EKT39052.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm12]
gi|414063578|gb|EKT44697.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm5]
gi|434959728|gb|ELL53174.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS44]
gi|434962658|gb|ELL55830.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22704]
gi|434968406|gb|ELL61158.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1882]
gi|434970885|gb|ELL63446.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1884]
gi|434981163|gb|ELL73050.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1594]
gi|434984435|gb|ELL76175.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1566]
gi|434985566|gb|ELL77253.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1580]
gi|434992801|gb|ELL84240.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1543]
gi|434999851|gb|ELL91025.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1441]
gi|435005180|gb|ELL96102.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1810]
gi|435005748|gb|ELL96668.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1558]
gi|435012610|gb|ELM03285.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1018]
gi|435019415|gb|ELM09859.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1010]
gi|435023013|gb|ELM13309.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1729]
gi|435028073|gb|ELM18161.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE30663]
gi|435029465|gb|ELM19523.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0895]
gi|435033612|gb|ELM23504.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0899]
gi|435033990|gb|ELM23880.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1457]
gi|435035546|gb|ELM25391.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1747]
gi|435045813|gb|ELM35439.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0968]
gi|435046579|gb|ELM36194.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1444]
gi|435058758|gb|ELM48065.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1445]
gi|435064835|gb|ELM53954.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1559]
gi|435065187|gb|ELM54293.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1565]
gi|435072245|gb|ELM61174.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1808]
gi|435080990|gb|ELM69644.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1811]
gi|435083636|gb|ELM72237.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1455]
gi|435085564|gb|ELM74117.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0956]
gi|435088376|gb|ELM76833.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1725]
gi|435093364|gb|ELM81704.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1575]
gi|435097614|gb|ELM85873.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1745]
gi|435106436|gb|ELM94453.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 576709]
gi|435107767|gb|ELM95750.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1791]
gi|435108624|gb|ELM96589.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1795]
gi|435118479|gb|ELN06131.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-16]
gi|435118827|gb|ELN06478.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 635290-58]
gi|435126755|gb|ELN14149.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-19]
gi|435127921|gb|ELN15281.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-2]
gi|435136409|gb|ELN23499.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-9]
gi|435141101|gb|ELN28043.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629163]
gi|435148626|gb|ELN35342.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE15-1]
gi|435149036|gb|ELN35750.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_N202]
gi|435156506|gb|ELN42996.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_56-3991]
gi|435159747|gb|ELN46065.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_81-2490]
gi|435161107|gb|ELN47349.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_76-3618]
gi|435172348|gb|ELN57891.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL909]
gi|435173008|gb|ELN58533.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL913]
gi|435180348|gb|ELN65456.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 638970-15]
gi|435182574|gb|ELN67578.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_69-4941]
gi|435191886|gb|ELN76442.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 17927]
gi|435193439|gb|ELN77918.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS4]
gi|435202164|gb|ELN86018.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 22-17]
gi|435204038|gb|ELN87756.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22558]
gi|435210161|gb|ELN93432.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 40-18]
gi|435218236|gb|ELO00643.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 4-1]
gi|435218653|gb|ELO01054.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 1-1]
gi|435226684|gb|ELO08249.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642046 4-7]
gi|435232730|gb|ELO13819.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648898 4-5]
gi|435234838|gb|ELO15691.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648900 1-16]
gi|435240746|gb|ELO21136.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 1-17]
gi|435242491|gb|ELO22796.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648899 3-17]
gi|435253004|gb|ELO32495.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 39-2]
gi|435257021|gb|ELO36315.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648902 6-8]
gi|435258632|gb|ELO37892.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648903 1-6]
gi|435264967|gb|ELO43852.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 653049 13-19]
gi|435266100|gb|ELO44874.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 8-1]
gi|435277195|gb|ELO55151.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648904 3-6]
gi|435279904|gb|ELO57641.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 9-7]
gi|435289890|gb|ELO66840.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 16-16]
gi|435292495|gb|ELO69259.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 42-20]
gi|435300144|gb|ELO76239.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 33944]
gi|435302596|gb|ELO78552.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SARB17]
gi|435305847|gb|ELO81260.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 76-2651]
gi|435316104|gb|ELO89301.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 81-2625]
gi|435324397|gb|ELO96330.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 62-1976]
gi|435327799|gb|ELO99450.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 53-407]
gi|435334814|gb|ELP05242.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 6.0562-1]
gi|436411836|gb|ELP09782.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Agona str. SH11G1113]
gi|436412648|gb|ELP10587.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Agona str. SH08SF124]
gi|436417761|gb|ELP15649.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Agona str. SH11G1113]
gi|436417936|gb|ELP15823.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Agona str. SH10GFN094]
gi|444846156|gb|ELX71337.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Dublin str. SL1438]
gi|444848743|gb|ELX73865.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9184]
gi|444856158|gb|ELX81196.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Dublin str. HWS51]
gi|444861802|gb|ELX86675.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE8a]
gi|444863826|gb|ELX88641.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 20037]
gi|444870359|gb|ELX94875.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 436]
gi|444871245|gb|ELX95695.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE10]
gi|444874660|gb|ELX98895.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 18569]
gi|444880888|gb|ELY04950.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13-1]
gi|444886388|gb|ELY10145.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. PT23]
gi|451912147|gb|AGF83953.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Javiana str. CFSAN001992]
Length = 505
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 230/440 (52%), Positives = 313/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDILGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R++
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKTRSK 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAGIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y + DF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 QVPYGDEVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q++ K + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFLDQVNAKAAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|85712972|ref|ZP_01044011.1| Lysyl-tRNA synthetase class II [Idiomarina baltica OS145]
gi|85693210|gb|EAQ31169.1| Lysyl-tRNA synthetase class II [Idiomarina baltica OS145]
Length = 503
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 225/440 (51%), Positives = 314/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLY-TDFKNYDIGDIIGAKGTLF 59
M +R+MGK SF +QD SG KIQLY++ + + + Y ++FK +D+GDIIGA G LF
Sbjct: 72 MTRRIMGKASFATIQDMSG-----KIQLYVARDNLPEGFYNSEFKKWDLGDIIGASGVLF 126
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELS+ V ++L+TK+LRPLP+KF L++QE +YR RY+DLI NE +R F R++
Sbjct: 127 KTGTGELSVLVDDVRLLTKALRPLPDKFHGLADQETRYRQRYLDLITNEESRNTFLVRSR 186
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+I IR ++ ++ F+EVETP++ PGGA A+PF THHN+L+M++FLRIAPELYLKRL++
Sbjct: 187 VIDYIRRYLNEHQFLEVETPMMQTIPGGAAARPFSTHHNALDMELFLRIAPELYLKRLVV 246
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY Y +Y LM TE M++ I D +G+T
Sbjct: 247 GGFEKVFEINRNFRNEGLSTRHNPEFTMLEFYWGYADYFDLMDMTEDMLRGIAQDVLGST 306
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ G DF + FE++T++EAI KY P+ E L ++ + +++ N L
Sbjct: 307 TFESGGVTYDFGQRFERMTVLEAIIKYMPEVTEEQLNDREQATAIAEQVGVDVNSAWGLG 366
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+Q+ +FE E +L PT+IT YP E+SPLAR+ N EN +T+RFE F G E+
Sbjct: 367 K-----IQIEIFETVAEHRLIQPTFITAYPAEVSPLARR-NDENPFVTDRFEFFAGGREL 420
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
ANGFSELND E+Q+ RF++Q++ K E + + +YD DY+ ALE+GMPP +G GIG+DRL
Sbjct: 421 ANGFSELNDAEDQAQRFRDQVEAK-EAGDDEAMFYDEDYVTALEHGMPPTAGEGIGIDRL 479
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+MLLT+S IRDV+LFPH+R
Sbjct: 480 VMLLTDSSTIRDVLLFPHMR 499
>gi|16761821|ref|NP_457438.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhi str. CT18]
gi|29143308|ref|NP_806650.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
gi|213616408|ref|ZP_03372234.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhi str. E98-2068]
gi|213646960|ref|ZP_03377013.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhi str. J185]
gi|378961126|ref|YP_005218612.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhi str. P-stx-12]
gi|33301733|sp|Q8Z3X8.3|SYK1_SALTI RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|25293040|pir||AF0871 lysyl tRNA synthetase (LysRS) [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16504123|emb|CAD02870.1| lysyl tRNA synthetase (LysRS) [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29138942|gb|AAO70510.1| lysyl tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
gi|374354998|gb|AEZ46759.1| Lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhi str. P-stx-12]
Length = 505
Score = 483 bits (1243), Expect = e-134, Method: Compositional matrix adjust.
Identities = 230/440 (52%), Positives = 313/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDILGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R++
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKTRSK 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAGIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y + DF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 QVPYGDEVFDFGKPFEKLTMHEAIKKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q++ K + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFLDQVNAKAAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|261820185|ref|YP_003258291.1| lysyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
gi|261604198|gb|ACX86684.1| lysyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
Length = 505
Score = 483 bits (1243), Expect = e-134, Method: Compositional matrix adjust.
Identities = 229/440 (52%), Positives = 313/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY+S + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVSRDDLAEGIYNEQFKKWDLGDILGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L++QE +YR RY+DLI N+ +R F+ R+
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANDESRNTFRIRSN 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
++++IR FM + FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 VMAAIRRFMVDHGFMEVETPMMQAIPGGASARPFITHHNALDIDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGISPRHNPEFTM+E Y AY +Y L+ TE + + + D +G+T
Sbjct: 250 GGFERVFEINRNFRNEGISPRHNPEFTMMELYMAYADYKDLIVLTENLFRTLTQDVLGST 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y + DF K FEKLT+ EAI KY P+ N DL + + + K + L
Sbjct: 310 TVVYGDQTFDFGKPFEKLTMREAICKYRPETNVADLDCLEKATAIAQSLGIKIEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEET E+ L PT+IT YP E+SPLAR+ N +N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEETAESSLIQPTFITEYPAEVSPLARR-NDQNPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF Q++ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAERFAQQVNAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|417427290|ref|ZP_12160715.1| Lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Mississippi str. A4-633]
gi|353616592|gb|EHC67811.1| Lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Mississippi str. A4-633]
Length = 505
Score = 483 bits (1243), Expect = e-134, Method: Compositional matrix adjust.
Identities = 230/440 (52%), Positives = 313/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDILGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R++
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKTRSK 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAGIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y + DF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 QVPYGDEVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q++ K + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFLDQVNAKAAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPTMR 502
>gi|432373454|ref|ZP_19616489.1| lysyl-tRNA synthetase [Escherichia coli KTE11]
gi|430894495|gb|ELC16783.1| lysyl-tRNA synthetase [Escherichia coli KTE11]
Length = 505
Score = 483 bits (1243), Expect = e-134, Method: Compositional matrix adjust.
Identities = 232/440 (52%), Positives = 312/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y D FK +D+GDIIGAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNDQFKKWDLGDIIGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +G T
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y LDF K FEKLT+ EAIKKY P+ + DL N K+ + + + L
Sbjct: 310 EVTYGDVKLDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESLGIHVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FDEVAEANLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q+ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFLDQVAAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|357405366|ref|YP_004917290.1| lysyl-tRNA synthetase [Methylomicrobium alcaliphilum 20Z]
gi|351718031|emb|CCE23696.1| Lysyl-tRNA synthetase (Lysine--tRNA ligase) (LysRS)
[Methylomicrobium alcaliphilum 20Z]
Length = 498
Score = 483 bits (1243), Expect = e-134, Method: Compositional matrix adjust.
Identities = 229/451 (50%), Positives = 322/451 (71%), Gaps = 29/451 (6%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF +QD SG ++QLY++ + + + Y + FK +DIGDI+GA+G LF
Sbjct: 68 MTRRIMGKASFCHIQDMSG-----QMQLYVARDHLPEGFYNEQFKKWDIGDIVGAEGVLF 122
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KTN GELSIKV ++L+TK+LRPLP KF +++QEIKYR RY+DLI+++ +RK F R++
Sbjct: 123 KTNVGELSIKVDDIRLLTKALRPLPEKFHGIADQEIKYRQRYLDLIMSDQSRKTFLIRSK 182
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR F+ F+EVETP++ PGGA A+PF THHN+L+M++FLRIAPELYLKRLI+
Sbjct: 183 IVTYIRDFLVARQFLEVETPMMQAIPGGATARPFKTHHNALDMELFLRIAPELYLKRLIV 242
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEG+S RHNPEFTM+EFY AY Y LM TE+M++ I ++ +G T
Sbjct: 243 GGFERVFEINRNFRNEGLSTRHNPEFTMLEFYQAYAEYHDLMDLTEEMVRGIALEVLGQT 302
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
I YQG DF K F+++T++E+I + P DL + K+
Sbjct: 303 LITYQGEHYDFGKPFDRMTVVESILHFNPDLTVDDLATRE-------------ASAKVAE 349
Query: 300 NLKKDI--------LQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFE 351
NLK + LQ+ +FE+T E +L NPT+IT YP E+SPLAR+ N ++ ++T+RFE
Sbjct: 350 NLKIPVKDGYGLGKLQIEIFEKTVEHRLMNPTFITAYPVEVSPLARR-NDDDPHVTDRFE 408
Query: 352 LFIIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASG 411
F+ G EIANGF+ELND E+Q+ RF+ Q++ K E + + +YD DY+ ALE+GMPP +G
Sbjct: 409 FFVGGREIANGFTELNDAEDQAERFRKQVEEK-EAGDDEAMHYDADYVTALEHGMPPTAG 467
Query: 412 CGIGVDRLIMLLTNSKNIRDVILFPHLRNEN 442
GIG+DRL+ML T++ +IRDV+LFPHLR +N
Sbjct: 468 EGIGIDRLVMLFTDAPSIRDVLLFPHLRPKN 498
>gi|423125681|ref|ZP_17113360.1| lysyl-tRNA synthetase [Klebsiella oxytoca 10-5250]
gi|376398762|gb|EHT11385.1| lysyl-tRNA synthetase [Klebsiella oxytoca 10-5250]
Length = 505
Score = 483 bits (1243), Expect = e-134, Method: Compositional matrix adjust.
Identities = 232/440 (52%), Positives = 309/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDII A+G LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLAEGVYNEQFKKWDLGDIIAARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAGIRQFMVGRGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +G T
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGHT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y + DF K FEKLT+ EAIKKY P+ DL N K+ + I + L
Sbjct: 310 EVPYGDQTFDFGKPFEKLTMREAIKKYRPETEMADLDNFDSAKAIAESIGVHVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR+ N EN IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARR-NDENPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q++ K + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFLDQVNAKAAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|366159862|ref|ZP_09459724.1| lysyl-tRNA synthetase [Escherichia sp. TW09308]
Length = 505
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 232/440 (52%), Positives = 312/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y D FK +D+GDIIGAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNDQFKKWDLGDIIGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +G T
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y LDF K FEKLT+ EAIKKY P+ + DL N K+ + + + L
Sbjct: 310 EVTYGDVKLDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESLGIHVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FDEVAEANLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q+ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFLDQVAAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|417186149|ref|ZP_12011292.1| lysine--tRNA ligase [Escherichia coli 93.0624]
gi|386182141|gb|EIH64899.1| lysine--tRNA ligase [Escherichia coli 93.0624]
Length = 505
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 233/440 (52%), Positives = 311/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDILGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+S IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +G T
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y LDF K FEKL + EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 EVTYGDVTLDFGKPFEKLAMREAIKKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR+++I N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARRNDI-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q+ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFLDQVAAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|419919956|ref|ZP_14438090.1| lysyl-tRNA synthetase [Escherichia coli KD2]
gi|388386006|gb|EIL47665.1| lysyl-tRNA synthetase [Escherichia coli KD2]
Length = 505
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 232/440 (52%), Positives = 311/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDILGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+S IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +G T
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y LDF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 EVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q+ K+ + + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFLDQVAAKD-AGDDKAMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|427592297|ref|ZP_18938411.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm3]
gi|414030826|gb|EKT13907.1| lysyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm3]
Length = 505
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 230/440 (52%), Positives = 312/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDILGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R++
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKTRSK 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAGIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y + DF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 QVPYGDEVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q++ K + E + +YD DY+ ALE+G PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFLDQVNAKAAGDDE-AMFYDEDYVTALEHGFPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|397659882|ref|YP_006500584.1| lysyl-tRNA synthetase [Klebsiella oxytoca E718]
gi|402845753|ref|ZP_10894086.1| lysine--tRNA ligase [Klebsiella sp. OBRC7]
gi|421725548|ref|ZP_16164735.1| lysyl-tRNA ligase [Klebsiella oxytoca M5al]
gi|423104754|ref|ZP_17092456.1| lysyl-tRNA synthetase [Klebsiella oxytoca 10-5242]
gi|376382717|gb|EHS95450.1| lysyl-tRNA synthetase [Klebsiella oxytoca 10-5242]
gi|394347991|gb|AFN34112.1| Lysyl-tRNA synthetase (class II) [Klebsiella oxytoca E718]
gi|402270204|gb|EJU19472.1| lysine--tRNA ligase [Klebsiella sp. OBRC7]
gi|410373611|gb|EKP28305.1| lysyl-tRNA ligase [Klebsiella oxytoca M5al]
Length = 505
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 232/440 (52%), Positives = 309/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDII A+G LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLAEGVYNEQFKKWDLGDIIAARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAGIRQFMVGRGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +G T
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGHT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y + DF K FEKLT+ EAIKKY P+ DL N K+ + I + L
Sbjct: 310 EVPYGDQTFDFGKPFEKLTMREAIKKYRPETEMADLDNFDSAKAIAESIGIHVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR+ N EN IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARR-NDENPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q++ K + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFLDQVNAKAAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|423110237|ref|ZP_17097932.1| lysyl-tRNA synthetase [Klebsiella oxytoca 10-5243]
gi|423116170|ref|ZP_17103861.1| lysyl-tRNA synthetase [Klebsiella oxytoca 10-5245]
gi|376378991|gb|EHS91747.1| lysyl-tRNA synthetase [Klebsiella oxytoca 10-5245]
gi|376380222|gb|EHS92970.1| lysyl-tRNA synthetase [Klebsiella oxytoca 10-5243]
Length = 505
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 232/440 (52%), Positives = 309/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDII A+G LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLAEGVYNEQFKKWDLGDIIAARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAGIRQFMVGRGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +G T
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGHT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y + DF K FEKLT+ EAIKKY P+ DL N K+ + I + L
Sbjct: 310 EVPYGDQTFDFGKPFEKLTMREAIKKYRPETEMADLDNFDSAKAIAESIGIHVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR+ N EN IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARR-NDENPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q++ K + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFLDQVNAKAAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|375257284|ref|YP_005016454.1| lysyl-tRNA synthetase [Klebsiella oxytoca KCTC 1686]
gi|365906762|gb|AEX02215.1| lysyl-tRNA synthetase [Klebsiella oxytoca KCTC 1686]
Length = 505
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 232/440 (52%), Positives = 309/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDII A+G LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLAEGVYNEQFKKWDLGDIIAARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAGIRQFMVGRGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +G T
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGHT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y + DF K FEKLT+ EAIKKY P+ DL N K+ + I + L
Sbjct: 310 EVPYGDQTFDFGKPFEKLTMREAIKKYRPETEMADLDNFDSAKAIAESIGIHVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR+ N EN IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARR-NDENPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q++ K + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFLDQVNAKAAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|432876812|ref|ZP_20094681.1| lysyl-tRNA synthetase [Escherichia coli KTE154]
gi|431418776|gb|ELH01170.1| lysyl-tRNA synthetase [Escherichia coli KTE154]
Length = 505
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 232/440 (52%), Positives = 312/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDILGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+S IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + + +G T
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQEILGKT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y LDF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 EVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q+ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFLDQVAAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|254491641|ref|ZP_05104820.1| lysyl-tRNA synthetase [Methylophaga thiooxidans DMS010]
gi|224463119|gb|EEF79389.1| lysyl-tRNA synthetase [Methylophaga thiooxydans DMS010]
Length = 497
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 226/446 (50%), Positives = 319/446 (71%), Gaps = 22/446 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M KRVMGK SF L+D SG +QLY+ + + + +Y FK +D+GDII A+G +F+
Sbjct: 69 MTKRVMGKASFANLRDMSG-----DMQLYVKRDDLPEGVYAQFKRWDMGDIIAAEGVMFR 123
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T GELS+ V ++L+TKSLRPLP KF LS+QE +YR RY+DLI+NE +R+ F+ RT+I
Sbjct: 124 TQKGELSVLVDDIRLLTKSLRPLPEKFHGLSDQETRYRQRYVDLIMNEASRETFRLRTKI 183
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I +R F+ ++EVETP++ PGGA A+PF T+HNSL+M +FLRIAPELYLKRLI+G
Sbjct: 184 IDGVRRFLMDKGYLEVETPMMQAIPGGATARPFTTYHNSLDMDLFLRIAPELYLKRLIVG 243
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+S RHNPEFTM+EFY AY ++ LM TE M++ + D +GT+K
Sbjct: 244 GFERVFEINRNFRNEGLSTRHNPEFTMVEFYQAYADHHELMDLTEAMLRTVTQDVLGTSK 303
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTP-----QYNEIDLQNKLFLKSELKKINPKFNQK 295
+ YQG +DF++ F ++T+ E+I + P Q N ++ ++ E+ + +
Sbjct: 304 VHYQGLDIDFAQPFTRMTVTESILHFNPDIKAEQLNTLEAAREIAASLEI-PVKDSYGLG 362
Query: 296 KILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFII 355
K+ Q+ +FE+T E +L +PT+IT YPTE+SPLAR+S+ + +T+RFE F+
Sbjct: 363 KV---------QIEIFEKTVEHRLMDPTFITAYPTEVSPLARRSD-NDPFVTDRFEFFVG 412
Query: 356 GNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIG 415
G EIANGFSELND E+Q+ RF+ Q++ K+ + E + +YD DYI ALEYGMPP +G GIG
Sbjct: 413 GREIANGFSELNDAEDQAERFQAQVEEKDAGDDE-AMHYDADYIRALEYGMPPTAGEGIG 471
Query: 416 VDRLIMLLTNSKNIRDVILFPHLRNE 441
+DRL+MLLT+S +IRDV+LFPH+R E
Sbjct: 472 IDRLVMLLTDSPSIRDVLLFPHMRPE 497
>gi|422791820|ref|ZP_16844522.1| lysyl-tRNA synthetase [Escherichia coli TA007]
gi|442597698|ref|ZP_21015477.1| Lysyl-tRNA synthetase (class II) [Escherichia coli O5:K4(L):H4 str.
ATCC 23502]
gi|323971673|gb|EGB66902.1| lysyl-tRNA synthetase [Escherichia coli TA007]
gi|441653672|emb|CCQ01367.1| Lysyl-tRNA synthetase (class II) [Escherichia coli O5:K4(L):H4 str.
ATCC 23502]
Length = 505
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 232/440 (52%), Positives = 311/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDILGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+S IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +G
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKM 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y LDF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 EVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q+ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFLDQVAAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|312964851|ref|ZP_07779091.1| lysyl-tRNA synthetase [Escherichia coli 2362-75]
gi|417757135|ref|ZP_12405206.1| lysyl-tRNA synthetase [Escherichia coli DEC2B]
gi|418998277|ref|ZP_13545867.1| lysyl-tRNA synthetase [Escherichia coli DEC1A]
gi|419003475|ref|ZP_13550993.1| lysyl-tRNA synthetase [Escherichia coli DEC1B]
gi|419009013|ref|ZP_13556437.1| lysyl-tRNA synthetase [Escherichia coli DEC1C]
gi|419019827|ref|ZP_13567131.1| lysyl-tRNA synthetase [Escherichia coli DEC1E]
gi|419025219|ref|ZP_13572442.1| lysyl-tRNA synthetase [Escherichia coli DEC2A]
gi|419030374|ref|ZP_13577530.1| lysyl-tRNA synthetase [Escherichia coli DEC2C]
gi|419036007|ref|ZP_13583090.1| lysyl-tRNA synthetase [Escherichia coli DEC2D]
gi|419041060|ref|ZP_13588082.1| lysyl-tRNA synthetase [Escherichia coli DEC2E]
gi|312290407|gb|EFR18287.1| lysyl-tRNA synthetase [Escherichia coli 2362-75]
gi|377842227|gb|EHU07282.1| lysyl-tRNA synthetase [Escherichia coli DEC1A]
gi|377842368|gb|EHU07422.1| lysyl-tRNA synthetase [Escherichia coli DEC1C]
gi|377845198|gb|EHU10221.1| lysyl-tRNA synthetase [Escherichia coli DEC1B]
gi|377858987|gb|EHU23825.1| lysyl-tRNA synthetase [Escherichia coli DEC1E]
gi|377862577|gb|EHU27389.1| lysyl-tRNA synthetase [Escherichia coli DEC2A]
gi|377872513|gb|EHU37159.1| lysyl-tRNA synthetase [Escherichia coli DEC2B]
gi|377875751|gb|EHU40360.1| lysyl-tRNA synthetase [Escherichia coli DEC2C]
gi|377878525|gb|EHU43112.1| lysyl-tRNA synthetase [Escherichia coli DEC2D]
gi|377888162|gb|EHU52634.1| lysyl-tRNA synthetase [Escherichia coli DEC2E]
Length = 505
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 232/440 (52%), Positives = 312/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDILGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+S IR FM + FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILSGIRQFMVNSGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +G T
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y LDF K FEKLT+ EAIKKY + + DL N K+ + I + L
Sbjct: 310 EVTYGDVTLDFGKPFEKLTMREAIKKYRSETDMADLDNFDSAKAIAESIGIHVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q+ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFLDQVAAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|300921221|ref|ZP_07137594.1| lysyl-tRNA synthetase [Escherichia coli MS 115-1]
gi|425290022|ref|ZP_18680854.1| lysine--tRNA ligase [Escherichia coli 3006]
gi|432535260|ref|ZP_19772227.1| lysyl-tRNA synthetase [Escherichia coli KTE234]
gi|300411827|gb|EFJ95137.1| lysyl-tRNA synthetase [Escherichia coli MS 115-1]
gi|408212189|gb|EKI36720.1| lysine--tRNA ligase [Escherichia coli 3006]
gi|431059114|gb|ELD68490.1| lysyl-tRNA synthetase [Escherichia coli KTE234]
Length = 505
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 233/440 (52%), Positives = 312/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDILGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+S IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + + +G T
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQNILGKT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y LDF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 EVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR+++I N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARRNDI-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q+ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFLDQVAAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|420259804|ref|ZP_14762499.1| lysyl-tRNA ligase [Yersinia enterocolitica subsp. enterocolitica
WA-314]
gi|404512770|gb|EKA26610.1| lysyl-tRNA ligase [Yersinia enterocolitica subsp. enterocolitica
WA-314]
Length = 505
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 228/440 (51%), Positives = 312/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G+IQLY+S + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFVTLQDV-----GGRIQLYVSRDDLPEGVYNEEFKKWDLGDILGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI S L+L+TK+LRPLP+KF L++QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCSELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
++S IR FM + FMEVETP++ PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 VMSGIRRFMVEKGFMEVETPMMQVIPGGASARPFVTHHNALDIDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEG+SPRHNPEFTM+E Y AY +Y L+ TE++ + + +G++
Sbjct: 250 GGFERVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYKDLIALTEELFRTLTETVLGSS 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y + DF K F KLT+ EAI KY P+ N DL + + + + K + L
Sbjct: 310 VVQYGDQTFDFGKPFAKLTMKEAICKYRPETNVADLDDMDKAVAIAEALGIKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+Q +FEET E+ L PT+IT YP E+SPLAR+ N +N IT+RFE FI G EI
Sbjct: 370 R-----VQCEIFEETAESHLIQPTFITEYPAEVSPLARR-NDDNPFITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q+ K E + + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFADQVSAK-EAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|418846764|ref|ZP_13401529.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19443]
gi|392809235|gb|EJA65272.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19443]
Length = 505
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 230/440 (52%), Positives = 312/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDILGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R++
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKTRSK 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAGIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +GTT
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y + DF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 LVPYGDEVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q++ K + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFLDQVNAKAAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|386311454|ref|YP_006007510.1| lysyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
Y11]
gi|418243563|ref|ZP_12870035.1| lysyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
PhRBD_Ye1]
gi|433551554|ref|ZP_20507596.1| Lysyl-tRNA synthetase (class II) [Yersinia enterocolitica IP 10393]
gi|318607021|emb|CBY28519.1| lysyl-tRNA synthetase (class II) [Yersinia enterocolitica subsp.
palearctica Y11]
gi|351776949|gb|EHB19209.1| lysyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
PhRBD_Ye1]
gi|431787736|emb|CCO70636.1| Lysyl-tRNA synthetase (class II) [Yersinia enterocolitica IP 10393]
Length = 505
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 228/440 (51%), Positives = 312/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G+IQLY+S + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFVTLQDV-----GGRIQLYVSRDDLPEGVYNEEFKKWDLGDILGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI S L+L+TK+LRPLP+KF L++QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCSELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
++S IR FM + FMEVETP++ PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 VMSGIRRFMVEKGFMEVETPMMQVIPGGASARPFVTHHNALDIDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEG+SPRHNPEFTM+E Y AY +Y L+ TE++ + + +G++
Sbjct: 250 GGFERVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYKDLIALTEELFRTLTETVLGSS 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y + DF K F KLT+ EAI KY P+ N DL + + + + K + L
Sbjct: 310 VVQYGDQTFDFDKPFAKLTMKEAICKYRPETNVADLDDMDKAVAIAESLGIKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+Q +FEET E+ L PT+IT YP E+SPLAR+ N +N IT+RFE FI G EI
Sbjct: 370 R-----VQCEIFEETAESHLIQPTFITEYPAEVSPLARR-NDDNPFITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q+ K E + + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFADQVSAK-EAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|332160510|ref|YP_004297087.1| lysyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|325664740|gb|ADZ41384.1| lysyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|330863445|emb|CBX73564.1| lysyl-tRNA synthetase [Yersinia enterocolitica W22703]
Length = 505
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 228/440 (51%), Positives = 312/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G+IQLY+S + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFVTLQDV-----GGRIQLYVSRDDLPEGVYNEEFKKWDLGDILGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI S L+L+TK+LRPLP+KF L++QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCSELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
++S IR FM + FMEVETP++ PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 VMSGIRRFMVEKGFMEVETPMMQVIPGGASARPFVTHHNALDIDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEG+SPRHNPEFTM+E Y AY +Y L+ TE++ + + +G++
Sbjct: 250 GGFERVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYKDLIALTEELFRTLTETVLGSS 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y + DF K F KLT+ EAI KY P+ N DL + + + + K + L
Sbjct: 310 VVQYGDQTFDFGKPFAKLTMKEAICKYRPETNVADLDDMDKAVAIAESLGIKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+Q +FEET E+ L PT+IT YP E+SPLAR+ N +N IT+RFE FI G EI
Sbjct: 370 R-----VQCEIFEETAESHLIQPTFITEYPAEVSPLARR-NDDNPFITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q+ K E + + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFADQVSAK-EAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|215488190|ref|YP_002330621.1| lysyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
gi|419014803|ref|ZP_13562146.1| lysyl-tRNA synthetase [Escherichia coli DEC1D]
gi|215266262|emb|CAS10691.1| lysine tRNA synthetase, constitutive [Escherichia coli O127:H6 str.
E2348/69]
gi|377855485|gb|EHU20356.1| lysyl-tRNA synthetase [Escherichia coli DEC1D]
Length = 505
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 232/440 (52%), Positives = 311/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDILGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+S IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +G T
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y LDF K FEKLT+ EAIKKY + + DL N K+ + I + L
Sbjct: 310 EVTYGDVTLDFGKPFEKLTMREAIKKYRSETDMADLDNFDSAKAIAESIGIHVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q+ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFLDQVAAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|292492473|ref|YP_003527912.1| lysyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
gi|291581068|gb|ADE15525.1| lysyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
Length = 500
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 226/439 (51%), Positives = 314/439 (71%), Gaps = 12/439 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M +R+MGK SF +QD SG +IQLYI + + + Y +FK +DIGDI+GA+G L K
Sbjct: 66 MTRRIMGKASFAHIQDMSG-----RIQLYIRRDQLPEEGYREFKRWDIGDIVGAEGVLMK 120
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN+GELS++V L+L+TKSLRPLP KF L++QE +YR RY+DLI+NE TR+ F++R+ I
Sbjct: 121 TNSGELSVRVDGLRLLTKSLRPLPEKFHGLADQETRYRQRYLDLIMNEVTRETFRRRSYI 180
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I IR ++ F+EVETP++ PGGA+A+PFIT+HN+L+M++FLRIAPELYLKRL++G
Sbjct: 181 IDRIRRYLGDKGFLEVETPMMQAIPGGAVARPFITYHNTLDMELFLRIAPELYLKRLVVG 240
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY Y LM TE M++ + +G+T+
Sbjct: 241 GFEKVFEINRNFRNEGLSARHNPEFTMLEFYQAYATYEDLMDLTEAMMRDLAQTVLGSTE 300
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQG DF F ++++ E+I + P DL+ + + ++ + L
Sbjct: 301 ITYQGETYDFGSPFTRMSLKESILSFNPDIFPADLETLPAARRVAEHLDIPLRESYGLGK 360
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
+QL +FE+T E++L NPT+IT YPTE+SPLAR+ N + + +RFE F+ G EIA
Sbjct: 361 -----IQLEIFEKTVESRLKNPTFITAYPTEVSPLARR-NETDPLVADRFEFFVGGWEIA 414
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RF+ Q+ E + + ++D DYI ALEYGMPP +G GIG+DRL+
Sbjct: 415 NGFSELNDAEDQAERFRAQLQ-DREAGDQEAMHFDMDYIQALEYGMPPTAGEGIGIDRLV 473
Query: 421 MLLTNSKNIRDVILFPHLR 439
MLLT+S +IRDV+LFPH+R
Sbjct: 474 MLLTDSPSIRDVLLFPHMR 492
>gi|82778344|ref|YP_404693.1| lysyl-tRNA synthetase [Shigella dysenteriae Sd197]
gi|123728505|sp|Q32BV3.1|SYK_SHIDS RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|81242492|gb|ABB63202.1| lysine tRNA synthetase, constitutive [Shigella dysenteriae Sd197]
Length = 505
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 232/440 (52%), Positives = 312/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDILGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+S IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + + +G T
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQNILGKT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y LDF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 310 EVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q+ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFLDQVAAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|123443572|ref|YP_001007545.1| lysyl-tRNA synthetase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|166230601|sp|A1JPL4.1|SYK_YERE8 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|122090533|emb|CAL13402.1| lysyl-tRNA synthetase [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 505
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 228/440 (51%), Positives = 312/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G+IQLY+S + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFVTLQDV-----GGRIQLYVSRDDLPEGVYNEEFKKWDLGDILGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI S L+L+TK+LRPLP+KF L++QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCSELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
++S IR FM + FMEVETP++ PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 VMSGIRRFMVEKGFMEVETPMMQVIPGGASARPFVTHHNALDIDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEG+SPRHNPEFTM+E Y AY +Y L+ TE++ + + +G++
Sbjct: 250 GGFERVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYKDLIALTEELFRTLTETVLGSS 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y + DF K F KLT+ EAI KY P+ N DL + + + + K + L
Sbjct: 310 VVQYGDQTFDFGKPFAKLTMKEAICKYRPETNVADLDDMDKAVAIAESLGIKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+Q +FEET E+ L PT+IT YP E+SPLAR+ N +N IT+RFE FI G EI
Sbjct: 370 R-----VQCEIFEETAESHLIQPTFITEYPAEVSPLARR-NDDNPFITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q+ K E + + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFADQVSAK-EAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|428784075|ref|ZP_19001568.1| lysyl-tRNA synthetase [Erwinia amylovora ACW56400]
gi|426277790|gb|EKV55515.1| lysyl-tRNA synthetase [Erwinia amylovora ACW56400]
Length = 506
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 231/440 (52%), Positives = 319/440 (72%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY+S + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVSRDDLAEGIYNEQFKKWDLGDILGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI S L+L+TK+LRPLP+KF L++QE +YR RY+DLI N+++R FK R+Q
Sbjct: 130 KTKTGELSIHCSELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANDDSRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR+FM DFMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 IMAGIRNFMVGRDFMEVETPMMQAIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF+++FEIN+NFRNEGISPRHNPEFTM+E Y AY +Y L++ TE + + + + +G+T
Sbjct: 250 GGFDRVFEINRNFRNEGISPRHNPEFTMMELYMAYADYEDLIELTESLFRTLAQNVLGST 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y + DF + F KLT+ EAI KY PQ + DL + F KS + N +K
Sbjct: 310 LVPYGDQQFDFGQPFAKLTMKEAILKYRPQTDLADLAD--FDKSVAIAQSLGINVEKSW- 366
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
L + + + +FEET E L PT+IT YP E+SPLAR++++ + IT+RFE FI EI
Sbjct: 367 GLGRVVTE--IFEETAEEHLIQPTFITEYPAEVSPLARRNDV-DPEITDRFEFFIGXREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND ++Q+ RF Q++ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAQDQAERFLQQVNAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP LR
Sbjct: 483 VMLFTNSHTIRDVILFPALR 502
>gi|238763212|ref|ZP_04624177.1| Lysyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
gi|238698485|gb|EEP91237.1| Lysyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
Length = 505
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 227/440 (51%), Positives = 312/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G+IQLY+S + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFVTLQDV-----GGRIQLYVSRDDLPEGVYNEEFKKWDLGDILGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI S L+L+TK+LRPLP+KF L++QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCSELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR FM + FMEVETP++ PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 VMAGIRSFMVEKGFMEVETPMMQVIPGGASARPFVTHHNALDIDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEG+SPRHNPEFTM+E Y AY +Y L+ TE++ + + +G++
Sbjct: 250 GGFERVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYKDLIVLTEELFRTLTEKVLGSS 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y + DF K F KLT+ EAI KY P+ N DL + + + + K + L
Sbjct: 310 VVQYGDQTFDFGKPFAKLTMKEAICKYRPETNVADLDDMDKAVAIAESLGIKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+Q +FEET E+ L PT+IT YP E+SPLAR+ N +N IT+RFE FI G EI
Sbjct: 370 R-----VQCEIFEETAESHLIQPTFITEYPAEVSPLARR-NDDNPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q+ K E + + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFADQVSAK-EAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|238759278|ref|ZP_04620444.1| Lysyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
gi|238702439|gb|EEP94990.1| Lysyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
Length = 505
Score = 480 bits (1235), Expect = e-133, Method: Compositional matrix adjust.
Identities = 227/440 (51%), Positives = 313/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G+IQLY+S + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFVTLQDV-----GGRIQLYVSRDDLAEGVYNEQFKKWDLGDILGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI S L+L+TK+LRPLP+KF L++QE +YR RY+DLI N+++R FK R+Q
Sbjct: 130 KTKTGELSIHCSELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANDDSRHTFKIRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
++S IR FM + FMEVETP++ PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 VMSGIRSFMVEKGFMEVETPMMQVIPGGASARPFVTHHNALDIDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEG+SPRHNPEFTM+E Y AY +Y L+ TE++ + + +G++
Sbjct: 250 GGFERVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYKDLIVLTEELFRTLTETILGSS 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y + DF K F KLT+ EAI KY P+ N DL + + + + K + L
Sbjct: 310 VVQYGEQTFDFGKPFAKLTMKEAICKYRPETNVADLDDMDKAVAIAESLGVKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+Q +FEET E+ L PT+IT YP E+SPLAR+ N +N IT+RFE FI G EI
Sbjct: 370 R-----VQCEIFEETAESHLVQPTFITEYPAEVSPLARR-NDDNPFITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q+ K E + + ++D DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFADQVSAK-EAGDDEAMFFDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|238787317|ref|ZP_04631116.1| Lysyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
gi|238724579|gb|EEQ16220.1| Lysyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
Length = 505
Score = 479 bits (1234), Expect = e-133, Method: Compositional matrix adjust.
Identities = 229/440 (52%), Positives = 311/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD GKIQLY+S + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFVTLQDV-----GGKIQLYVSRDDLPEGVYNEEFKKWDLGDILGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI S L+L+TK+LRPLP+KF L++QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCSELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANDESRHTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
++S IR FM + FMEVETP++ PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 VMSGIRRFMVEKGFMEVETPMMQVIPGGASARPFVTHHNALDIDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEG+SPRHNPEFTM+E Y AY +Y L+ TE++ + + +G+
Sbjct: 250 GGFERVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYKDLIVLTEELFRTLTETVLGSC 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y + DF K F KLT+ EAI KY P+ N DL + + + + K + L
Sbjct: 310 VVQYGEQTFDFGKPFAKLTMKEAICKYRPETNVADLDDMDKALAIAESLGIKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+Q +FEET E+ L PT+IT YP E+SPLAR+ N +N IT+RFE FI G EI
Sbjct: 370 R-----VQCEIFEETAESHLIQPTFITEYPAEVSPLARR-NDDNPFITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q+ K E + + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFADQVSAK-EAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|22127148|ref|NP_670571.1| lysyl-tRNA synthetase [Yersinia pestis KIM10+]
gi|45443319|ref|NP_994858.1| lysyl-tRNA synthetase [Yersinia pestis biovar Microtus str. 91001]
gi|51597474|ref|YP_071665.1| lysyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
gi|108806378|ref|YP_650294.1| lysyl-tRNA synthetase [Yersinia pestis Antiqua]
gi|108813247|ref|YP_649014.1| lysyl-tRNA synthetase [Yersinia pestis Nepal516]
gi|145597934|ref|YP_001162010.1| lysyl-tRNA synthetase [Yersinia pestis Pestoides F]
gi|150260101|ref|ZP_01916829.1| lysyl-tRNA synthetase [Yersinia pestis CA88-4125]
gi|153947369|ref|YP_001399867.1| lysyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
gi|162420680|ref|YP_001608157.1| lysyl-tRNA synthetase [Yersinia pestis Angola]
gi|165924940|ref|ZP_02220772.1| lysyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165937386|ref|ZP_02225950.1| lysyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
IP275]
gi|166010379|ref|ZP_02231277.1| lysyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166212829|ref|ZP_02238864.1| lysyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167399819|ref|ZP_02305337.1| lysyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167418755|ref|ZP_02310508.1| lysyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167425298|ref|ZP_02317051.1| lysyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|170023173|ref|YP_001719678.1| lysyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
gi|186896594|ref|YP_001873706.1| lysyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
gi|218928061|ref|YP_002345936.1| lysyl-tRNA synthetase [Yersinia pestis CO92]
gi|229837574|ref|ZP_04457736.1| lysyl-tRNA synthetase [Yersinia pestis Pestoides A]
gi|229840797|ref|ZP_04460956.1| lysyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229842644|ref|ZP_04462799.1| lysyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. India
195]
gi|229903703|ref|ZP_04518816.1| lysyl-tRNA synthetase [Yersinia pestis Nepal516]
gi|270487482|ref|ZP_06204556.1| lysine--tRNA ligase [Yersinia pestis KIM D27]
gi|294502945|ref|YP_003567007.1| lysyl-tRNA synthetase [Yersinia pestis Z176003]
gi|384121384|ref|YP_005504004.1| lysyl-tRNA synthetase [Yersinia pestis D106004]
gi|384125256|ref|YP_005507870.1| lysyl-tRNA synthetase [Yersinia pestis D182038]
gi|384137120|ref|YP_005519822.1| lysyl-tRNA synthetase [Yersinia pestis A1122]
gi|384413532|ref|YP_005622894.1| lysyl-tRNA synthetase [Yersinia pestis biovar Medievalis str.
Harbin 35]
gi|420545425|ref|ZP_15043558.1| lysine--tRNA ligase [Yersinia pestis PY-01]
gi|420550736|ref|ZP_15048303.1| lysine--tRNA ligase [Yersinia pestis PY-02]
gi|420556223|ref|ZP_15053170.1| lysine--tRNA ligase [Yersinia pestis PY-03]
gi|420561834|ref|ZP_15058076.1| lysine--tRNA ligase [Yersinia pestis PY-04]
gi|420566863|ref|ZP_15062617.1| lysine--tRNA ligase [Yersinia pestis PY-05]
gi|420572533|ref|ZP_15067769.1| lysine--tRNA ligase [Yersinia pestis PY-06]
gi|420577857|ref|ZP_15072585.1| lysine--tRNA ligase [Yersinia pestis PY-07]
gi|420583189|ref|ZP_15077435.1| lysine--tRNA ligase [Yersinia pestis PY-08]
gi|420588323|ref|ZP_15082066.1| lysine--tRNA ligase [Yersinia pestis PY-09]
gi|420593658|ref|ZP_15086875.1| lysine--tRNA ligase [Yersinia pestis PY-10]
gi|420599353|ref|ZP_15091967.1| lysine--tRNA ligase [Yersinia pestis PY-11]
gi|420604825|ref|ZP_15096853.1| lysine--tRNA ligase [Yersinia pestis PY-12]
gi|420610173|ref|ZP_15101699.1| lysine--tRNA ligase [Yersinia pestis PY-13]
gi|420615453|ref|ZP_15106383.1| lysine--tRNA ligase [Yersinia pestis PY-14]
gi|420620880|ref|ZP_15111152.1| lysine--tRNA ligase [Yersinia pestis PY-15]
gi|420625966|ref|ZP_15115763.1| lysine--tRNA ligase [Yersinia pestis PY-16]
gi|420631122|ref|ZP_15120427.1| lysine--tRNA ligase [Yersinia pestis PY-19]
gi|420636227|ref|ZP_15124994.1| lysine--tRNA ligase [Yersinia pestis PY-25]
gi|420641840|ref|ZP_15130059.1| lysine--tRNA ligase [Yersinia pestis PY-29]
gi|420646921|ref|ZP_15134715.1| lysine--tRNA ligase [Yersinia pestis PY-32]
gi|420652623|ref|ZP_15139839.1| lysine--tRNA ligase [Yersinia pestis PY-34]
gi|420658103|ref|ZP_15144765.1| lysine--tRNA ligase [Yersinia pestis PY-36]
gi|420663423|ref|ZP_15149526.1| lysine--tRNA ligase [Yersinia pestis PY-42]
gi|420668417|ref|ZP_15154043.1| lysine--tRNA ligase [Yersinia pestis PY-45]
gi|420673705|ref|ZP_15158855.1| lysine--tRNA ligase [Yersinia pestis PY-46]
gi|420679224|ref|ZP_15163866.1| lysine--tRNA ligase [Yersinia pestis PY-47]
gi|420684478|ref|ZP_15168583.1| lysine--tRNA ligase [Yersinia pestis PY-48]
gi|420689668|ref|ZP_15173181.1| lysine--tRNA ligase [Yersinia pestis PY-52]
gi|420695505|ref|ZP_15178288.1| lysine--tRNA ligase [Yersinia pestis PY-53]
gi|420700813|ref|ZP_15182856.1| lysine--tRNA ligase [Yersinia pestis PY-54]
gi|420706861|ref|ZP_15187732.1| lysine--tRNA ligase [Yersinia pestis PY-55]
gi|420712170|ref|ZP_15192529.1| lysine--tRNA ligase [Yersinia pestis PY-56]
gi|420717546|ref|ZP_15197256.1| lysine--tRNA ligase [Yersinia pestis PY-58]
gi|420723168|ref|ZP_15202077.1| lysine--tRNA ligase [Yersinia pestis PY-59]
gi|420728821|ref|ZP_15207119.1| lysine--tRNA ligase [Yersinia pestis PY-60]
gi|420733869|ref|ZP_15211666.1| lysine--tRNA ligase [Yersinia pestis PY-61]
gi|420739325|ref|ZP_15216591.1| lysine--tRNA ligase [Yersinia pestis PY-63]
gi|420744629|ref|ZP_15221285.1| lysine--tRNA ligase [Yersinia pestis PY-64]
gi|420750455|ref|ZP_15226239.1| lysine--tRNA ligase [Yersinia pestis PY-65]
gi|420755651|ref|ZP_15230793.1| lysine--tRNA ligase [Yersinia pestis PY-66]
gi|420761615|ref|ZP_15235620.1| lysine--tRNA ligase [Yersinia pestis PY-71]
gi|420766828|ref|ZP_15240325.1| lysine--tRNA ligase [Yersinia pestis PY-72]
gi|420771820|ref|ZP_15244805.1| lysine--tRNA ligase [Yersinia pestis PY-76]
gi|420777183|ref|ZP_15249618.1| lysine--tRNA ligase [Yersinia pestis PY-88]
gi|420782705|ref|ZP_15254453.1| lysine--tRNA ligase [Yersinia pestis PY-89]
gi|420788102|ref|ZP_15259197.1| lysine--tRNA ligase [Yersinia pestis PY-90]
gi|420793562|ref|ZP_15264121.1| lysine--tRNA ligase [Yersinia pestis PY-91]
gi|420798700|ref|ZP_15268746.1| lysine--tRNA ligase [Yersinia pestis PY-92]
gi|420804051|ref|ZP_15273559.1| lysine--tRNA ligase [Yersinia pestis PY-93]
gi|420809281|ref|ZP_15278296.1| lysine--tRNA ligase [Yersinia pestis PY-94]
gi|420815028|ref|ZP_15283447.1| lysine--tRNA ligase [Yersinia pestis PY-95]
gi|420820171|ref|ZP_15288102.1| lysine--tRNA ligase [Yersinia pestis PY-96]
gi|420825261|ref|ZP_15292655.1| lysine--tRNA ligase [Yersinia pestis PY-98]
gi|420831074|ref|ZP_15297907.1| lysine--tRNA ligase [Yersinia pestis PY-99]
gi|420835887|ref|ZP_15302247.1| lysine--tRNA ligase [Yersinia pestis PY-100]
gi|420841032|ref|ZP_15306907.1| lysine--tRNA ligase [Yersinia pestis PY-101]
gi|420846652|ref|ZP_15311985.1| lysine--tRNA ligase [Yersinia pestis PY-102]
gi|420852045|ref|ZP_15316750.1| lysine--tRNA ligase [Yersinia pestis PY-103]
gi|420857570|ref|ZP_15321438.1| lysine--tRNA ligase [Yersinia pestis PY-113]
gi|421762330|ref|ZP_16199128.1| lysyl-tRNA ligase [Yersinia pestis INS]
gi|32130174|sp|Q8ZHK5.1|SYK_YERPE RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|81638631|sp|Q666T3.1|SYK_YERPS RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|122979986|sp|Q1CF16.1|SYK_YERPN RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|123072973|sp|Q1CB23.1|SYK_YERPA RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|166230602|sp|A4TIC5.1|SYK_YERPP RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|166980072|sp|A7FF39.1|SYK_YERP3 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|226710933|sp|A9R4M4.1|SYK_YERPG RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|238688479|sp|B1JPH6.1|SYK_YERPY RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|238691348|sp|B2K0N6.1|SYK_YERPB RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|21960209|gb|AAM86822.1|AE013928_7 lysine tRNA synthetase [Yersinia pestis KIM10+]
gi|45438188|gb|AAS63735.1| lysyl-tRNA synthetase [Yersinia pestis biovar Microtus str. 91001]
gi|51590756|emb|CAH22401.1| lysyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
gi|108776895|gb|ABG19414.1| lysyl-tRNA synthetase [Yersinia pestis Nepal516]
gi|108778291|gb|ABG12349.1| lysyl-tRNA synthetase [Yersinia pestis Antiqua]
gi|115346672|emb|CAL19555.1| lysyl-tRNA synthetase [Yersinia pestis CO92]
gi|145209630|gb|ABP39037.1| lysyl-tRNA synthetase [Yersinia pestis Pestoides F]
gi|149289509|gb|EDM39586.1| lysyl-tRNA synthetase [Yersinia pestis CA88-4125]
gi|152958864|gb|ABS46325.1| lysyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
gi|162353495|gb|ABX87443.1| lysyl-tRNA synthetase [Yersinia pestis Angola]
gi|165914860|gb|EDR33473.1| lysyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
IP275]
gi|165923140|gb|EDR40291.1| lysyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165990865|gb|EDR43166.1| lysyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166206121|gb|EDR50601.1| lysyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166962749|gb|EDR58770.1| lysyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167050527|gb|EDR61935.1| lysyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167055698|gb|EDR65482.1| lysyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|169749707|gb|ACA67225.1| lysyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
gi|186699620|gb|ACC90249.1| lysyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
gi|229679473|gb|EEO75576.1| lysyl-tRNA synthetase [Yersinia pestis Nepal516]
gi|229690954|gb|EEO83008.1| lysyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. India
195]
gi|229697163|gb|EEO87210.1| lysyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229704262|gb|EEO91273.1| lysyl-tRNA synthetase [Yersinia pestis Pestoides A]
gi|262360980|gb|ACY57701.1| lysyl-tRNA synthetase [Yersinia pestis D106004]
gi|262364920|gb|ACY61477.1| lysyl-tRNA synthetase [Yersinia pestis D182038]
gi|270335986|gb|EFA46763.1| lysine--tRNA ligase [Yersinia pestis KIM D27]
gi|294353404|gb|ADE63745.1| lysyl-tRNA synthetase [Yersinia pestis Z176003]
gi|320014036|gb|ADV97607.1| lysyl-tRNA synthetase [Yersinia pestis biovar Medievalis str.
Harbin 35]
gi|342852249|gb|AEL70802.1| lysyl-tRNA synthetase [Yersinia pestis A1122]
gi|391431310|gb|EIQ92897.1| lysine--tRNA ligase [Yersinia pestis PY-01]
gi|391432133|gb|EIQ93605.1| lysine--tRNA ligase [Yersinia pestis PY-02]
gi|391434574|gb|EIQ95751.1| lysine--tRNA ligase [Yersinia pestis PY-03]
gi|391447155|gb|EIR07101.1| lysine--tRNA ligase [Yersinia pestis PY-04]
gi|391447869|gb|EIR07738.1| lysine--tRNA ligase [Yersinia pestis PY-05]
gi|391451160|gb|EIR10681.1| lysine--tRNA ligase [Yersinia pestis PY-06]
gi|391463349|gb|EIR21763.1| lysine--tRNA ligase [Yersinia pestis PY-07]
gi|391464407|gb|EIR22693.1| lysine--tRNA ligase [Yersinia pestis PY-08]
gi|391466688|gb|EIR24738.1| lysine--tRNA ligase [Yersinia pestis PY-09]
gi|391480233|gb|EIR36926.1| lysine--tRNA ligase [Yersinia pestis PY-10]
gi|391480968|gb|EIR37550.1| lysine--tRNA ligase [Yersinia pestis PY-11]
gi|391481098|gb|EIR37666.1| lysine--tRNA ligase [Yersinia pestis PY-12]
gi|391495381|gb|EIR50485.1| lysine--tRNA ligase [Yersinia pestis PY-13]
gi|391496100|gb|EIR51083.1| lysine--tRNA ligase [Yersinia pestis PY-15]
gi|391499348|gb|EIR53973.1| lysine--tRNA ligase [Yersinia pestis PY-14]
gi|391511243|gb|EIR64681.1| lysine--tRNA ligase [Yersinia pestis PY-16]
gi|391512444|gb|EIR65760.1| lysine--tRNA ligase [Yersinia pestis PY-19]
gi|391515406|gb|EIR68395.1| lysine--tRNA ligase [Yersinia pestis PY-25]
gi|391526689|gb|EIR78693.1| lysine--tRNA ligase [Yersinia pestis PY-29]
gi|391529707|gb|EIR81370.1| lysine--tRNA ligase [Yersinia pestis PY-34]
gi|391530600|gb|EIR82163.1| lysine--tRNA ligase [Yersinia pestis PY-32]
gi|391543416|gb|EIR93746.1| lysine--tRNA ligase [Yersinia pestis PY-36]
gi|391545272|gb|EIR95381.1| lysine--tRNA ligase [Yersinia pestis PY-42]
gi|391546070|gb|EIR96093.1| lysine--tRNA ligase [Yersinia pestis PY-45]
gi|391559977|gb|EIS08661.1| lysine--tRNA ligase [Yersinia pestis PY-46]
gi|391560887|gb|EIS09476.1| lysine--tRNA ligase [Yersinia pestis PY-47]
gi|391562580|gb|EIS10975.1| lysine--tRNA ligase [Yersinia pestis PY-48]
gi|391575118|gb|EIS21889.1| lysine--tRNA ligase [Yersinia pestis PY-52]
gi|391575662|gb|EIS22328.1| lysine--tRNA ligase [Yersinia pestis PY-53]
gi|391587542|gb|EIS32691.1| lysine--tRNA ligase [Yersinia pestis PY-55]
gi|391588912|gb|EIS33870.1| lysine--tRNA ligase [Yersinia pestis PY-54]
gi|391591053|gb|EIS35680.1| lysine--tRNA ligase [Yersinia pestis PY-56]
gi|391604369|gb|EIS47388.1| lysine--tRNA ligase [Yersinia pestis PY-60]
gi|391605262|gb|EIS48171.1| lysine--tRNA ligase [Yersinia pestis PY-58]
gi|391606315|gb|EIS49061.1| lysine--tRNA ligase [Yersinia pestis PY-59]
gi|391618865|gb|EIS60214.1| lysine--tRNA ligase [Yersinia pestis PY-61]
gi|391619568|gb|EIS60817.1| lysine--tRNA ligase [Yersinia pestis PY-63]
gi|391627111|gb|EIS67358.1| lysine--tRNA ligase [Yersinia pestis PY-64]
gi|391630385|gb|EIS70149.1| lysine--tRNA ligase [Yersinia pestis PY-65]
gi|391641808|gb|EIS80160.1| lysine--tRNA ligase [Yersinia pestis PY-71]
gi|391644247|gb|EIS82273.1| lysine--tRNA ligase [Yersinia pestis PY-72]
gi|391645359|gb|EIS83245.1| lysine--tRNA ligase [Yersinia pestis PY-66]
gi|391654116|gb|EIS90981.1| lysine--tRNA ligase [Yersinia pestis PY-76]
gi|391660471|gb|EIS96624.1| lysine--tRNA ligase [Yersinia pestis PY-88]
gi|391665238|gb|EIT00844.1| lysine--tRNA ligase [Yersinia pestis PY-89]
gi|391667024|gb|EIT02400.1| lysine--tRNA ligase [Yersinia pestis PY-90]
gi|391672265|gb|EIT07100.1| lysine--tRNA ligase [Yersinia pestis PY-91]
gi|391685183|gb|EIT18747.1| lysine--tRNA ligase [Yersinia pestis PY-93]
gi|391686661|gb|EIT20059.1| lysine--tRNA ligase [Yersinia pestis PY-92]
gi|391687719|gb|EIT21003.1| lysine--tRNA ligase [Yersinia pestis PY-94]
gi|391699386|gb|EIT31585.1| lysine--tRNA ligase [Yersinia pestis PY-95]
gi|391703001|gb|EIT34823.1| lysine--tRNA ligase [Yersinia pestis PY-96]
gi|391703598|gb|EIT35333.1| lysine--tRNA ligase [Yersinia pestis PY-98]
gi|391713514|gb|EIT44283.1| lysine--tRNA ligase [Yersinia pestis PY-99]
gi|391719269|gb|EIT49397.1| lysine--tRNA ligase [Yersinia pestis PY-100]
gi|391719571|gb|EIT49658.1| lysine--tRNA ligase [Yersinia pestis PY-101]
gi|391730375|gb|EIT59210.1| lysine--tRNA ligase [Yersinia pestis PY-102]
gi|391733090|gb|EIT61541.1| lysine--tRNA ligase [Yersinia pestis PY-103]
gi|391736724|gb|EIT64688.1| lysine--tRNA ligase [Yersinia pestis PY-113]
gi|411177465|gb|EKS47479.1| lysyl-tRNA ligase [Yersinia pestis INS]
Length = 505
Score = 479 bits (1234), Expect = e-133, Method: Compositional matrix adjust.
Identities = 229/440 (52%), Positives = 312/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G+IQLY+S + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFVTLQDV-----GGRIQLYVSRDDLPEGVYNEEFKKWDLGDILGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI S L+L+TK+LRPLP+KF L++QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCSELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANDESRHTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
++S IR FM + FMEVETP++ PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 VMSGIRSFMVEKGFMEVETPMMQVIPGGASARPFVTHHNALDIDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEG+SPRHNPEFTM+E Y AY +Y L+ TE++ + + +G++
Sbjct: 250 GGFERVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYKDLIVLTEELFRTLTETILGSS 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y + DF K F KLT+ EAI KY P+ N DL + + + + K + L
Sbjct: 310 VVQYGEQTFDFGKPFAKLTMKEAICKYRPETNVADLDDMDKAVAIAESLGIKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+Q +FEET E+ L PT+IT YP E+SPLAR+ N +N IT+RFE FI G EI
Sbjct: 370 R-----IQCEIFEETAESHLIQPTFITEYPAEVSPLARR-NDDNPFITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q+ K E + + +YD DYI ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFADQVSAK-EAGDDEAMFYDEDYITALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|198282779|ref|YP_002219100.1| lysyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218665818|ref|YP_002424976.1| lysyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270]
gi|416006313|ref|ZP_11561086.1| lysyl-tRNA synthetase [Acidithiobacillus sp. GGI-221]
gi|198247300|gb|ACH82893.1| lysyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218518031|gb|ACK78617.1| lysyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270]
gi|339836391|gb|EGQ63987.1| lysyl-tRNA synthetase [Acidithiobacillus sp. GGI-221]
Length = 496
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 216/446 (48%), Positives = 314/446 (70%), Gaps = 20/446 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M +RVMGK SF +QD SG +IQL++S + +G+ +Y FK D+GDIIG G LF+
Sbjct: 66 MSRRVMGKASFADIQDQSG-----RIQLFVSRDNLGEEVYARFKGLDLGDIIGVDGILFR 120
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+KV SL+L++K+LRPLP K+ L++ E ++R RY+DLI+ E TR+ F+ R +
Sbjct: 121 TKTGELSLKVHSLQLLSKALRPLPEKWHGLADPETRFRQRYVDLIVTEATRRTFQIRAET 180
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
++++R + + F E ETP++ PGGA A+PF+THH++L+M ++LRIAPELYLKRL++G
Sbjct: 181 VAALRDGLRQRGFYEAETPMMQPVPGGATARPFVTHHHALDMTLYLRIAPELYLKRLVVG 240
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN+NFRNEGIS RHNPEFTM+E+Y AY +++ M TE +I+ +GTT
Sbjct: 241 GIEQVFEINRNFRNEGISTRHNPEFTMLEWYEAYADHVRAMDLTETLIRAAAQAALGTTA 300
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKIN----PKFNQKK 296
I YQG +D K F +LT+ E+++ + P + DL++ L ++L +++ P + K
Sbjct: 301 ISYQGLEIDLGKPFHRLTVTESVRAHNPDLADADLRDPAVLAAKLAQLHLPCQPAWGWGK 360
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L + +FE+T E L PT+IT YP E+SPLAR++++ + +T+RFEL I G
Sbjct: 361 RL---------IEIFEKTVEGHLQQPTFITEYPLEVSPLARRNDL-DPEVTDRFELMIAG 410
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELNDPE+QS RF+ Q++ K+ E + ++D DYI ALEYGMPP +G G+G+
Sbjct: 411 RELANGFSELNDPEDQSARFRAQVEAKD-AGDEEAMFFDADYIRALEYGMPPTAGVGLGI 469
Query: 417 DRLIMLLTNSKNIRDVILFPHLRNEN 442
DRL+MLL + +IR+VILFPHLR E
Sbjct: 470 DRLVMLLADQPSIREVILFPHLRPEQ 495
>gi|148244696|ref|YP_001219390.1| lysyl-tRNA synthetase, class II [Candidatus Vesicomyosocius
okutanii HA]
gi|259511539|sp|A5CWL4.1|SYK_VESOH RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|146326523|dbj|BAF61666.1| lysyl-tRNA synthetase, class II [Candidatus Vesicomyosocius
okutanii HA]
Length = 496
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 253/446 (56%), Positives = 330/446 (73%), Gaps = 22/446 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
MLKRVMGK+SF+ +QD+SG KIQL+++ + + ++ Y + FK +DIGDIIGA G LF
Sbjct: 66 MLKRVMGKVSFVHVQDSSG-----KIQLFVTCDKLPESFYNEQFKKWDIGDIIGAIGILF 120
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KTN GELSI++ +KL+TKSLRPLP KF LS+QEI+YR RY+DLI+N+ +R FK+R+Q
Sbjct: 121 KTNMGELSIRIDDIKLLTKSLRPLPGKFHGLSDQEIRYRQRYVDLIMNKTSRNTFKRRSQ 180
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
II+ IR+F +DF+EVETP+L PGGA AKPF T+HN+L+M M+ RI+PELYLKRLII
Sbjct: 181 IINYIRNFFNHHDFIEVETPMLQTIPGGATAKPFETYHNALDMPMYFRISPELYLKRLII 240
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GG NK+FEIN+NFRNEG+S RHNPEFTMIEFY AY Y LM TEK+ + I +D G+
Sbjct: 241 GGMNKVFEINRNFRNEGLSTRHNPEFTMIEFYQAYGTYHDLMNLTEKLFRSIALDVCGSA 300
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ YQG LDF KSF++++++++I +Y P DL K N K +K+
Sbjct: 301 NVYYQGNNLDFFKSFKRISVVDSILQYNPSLIATDLNQK----------NAKQTAEKLGI 350
Query: 300 NLKKDI----LQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFII 355
+K++ +Q+ +FE T E KL PT+IT YPTE+SPLAR+ N +N IT+RFELFI
Sbjct: 351 QIKENWGLGKIQIEIFETTVEEKLLQPTFITEYPTEVSPLARR-NDDNPFITDRFELFIS 409
Query: 356 GNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIG 415
G EIANGFSELND ++Q+ RFK Q++ K+ N E S YYD DYI ALEYGMPP +G GIG
Sbjct: 410 GCEIANGFSELNDAQDQAERFKKQVEEKDLGNDE-SMYYDADYIRALEYGMPPTAGEGIG 468
Query: 416 VDRLIMLLTNSKNIRDVILFPHLRNE 441
+DRL+ML T+S +IRDVILFPH+R E
Sbjct: 469 IDRLVMLFTDSPSIRDVILFPHMRAE 494
>gi|300722131|ref|YP_003711414.1| lysine tRNA synthetase, constitutive [Xenorhabdus nematophila ATCC
19061]
gi|297628631|emb|CBJ89209.1| lysine tRNA synthetase, constitutive [Xenorhabdus nematophila ATCC
19061]
Length = 504
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 229/440 (52%), Positives = 316/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLY-TDFKNYDIGDIIGAKGTLF 59
M +R+MGK SF LQD G +IQ+Y+S + + + +Y T FK +D+GDI+GA+G LF
Sbjct: 74 MTRRIMGKASFATLQDMGG-----RIQIYVSRDDLPEGIYNTQFKKWDLGDILGARGKLF 128
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L++QE +YR RY+DLI N+ +RK F+ R++
Sbjct: 129 KTQTGELSIHCTELRLLTKALRPLPDKFHGLADQETRYRQRYLDLISNDESRKAFQIRSR 188
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
++S++R+FM DFMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 189 VMSALRNFMTSKDFMEVETPMMQAIPGGASARPFITHHNALDIDMYLRIAPELYLKRLVV 248
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGISPRHNPEFTM+E Y AY +Y L+ TE++ + + + +GTT
Sbjct: 249 GGFERVFEINRNFRNEGISPRHNPEFTMMELYMAYADYQDLIVLTEELFRTLTQEVLGTT 308
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y + DF K F K+T+ EAI KY P+ N DL + + + + + + L
Sbjct: 309 LVQYGEQEFDFGKPFTKMTMKEAICKYRPETNMADLDDMDKAVAIAESLGIEVEKGWGLG 368
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+Q +FEET E+ L PT+IT YP E+SPLAR+ N +N IT+RFE FI G EI
Sbjct: 369 R-----VQCEIFEETAESHLIQPTFITAYPAEVSPLARR-NDDNPFITDRFEFFIGGREI 422
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF Q+ K++ + E + +YD DYI ALE+G+PP +G GIG+DR+
Sbjct: 423 GNGFSELNDAEDQAERFAEQVRQKDDGDDE-AMFYDEDYITALEHGLPPTAGLGIGIDRM 481
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 482 VMLFTNSHTIRDVILFPAMR 501
>gi|56459930|ref|YP_155211.1| lysyl-tRNA synthetase [Idiomarina loihiensis L2TR]
gi|81363138|sp|Q5QYV9.1|SYK_IDILO RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|56178940|gb|AAV81662.1| Lysyl-tRNA synthetase class II [Idiomarina loihiensis L2TR]
Length = 503
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 226/445 (50%), Positives = 317/445 (71%), Gaps = 23/445 (5%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLY-TDFKNYDIGDIIGAKGTLF 59
M +R+MGK SF +QD SG KIQLY++ + + + Y T+FK +D+GDI+GA GTLF
Sbjct: 72 MTRRIMGKASFATIQDMSG-----KIQLYVARDNLPEGYYNTEFKKWDLGDILGASGTLF 126
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
T TGELS++V ++L+TK+LRPLP+KF LS+QE++YR RY+DLI NE +R F R++
Sbjct: 127 ITGTGELSVQVDEVRLLTKALRPLPDKFHGLSDQEMRYRQRYLDLITNEESRSTFMARSK 186
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
II IR F+ F+EVETP++ PGGA A+PF THHN+L+M++FLRIAPELYLKRL++
Sbjct: 187 IIDYIRRFLSDRQFLEVETPMMQAIPGGAAARPFSTHHNALDMELFLRIAPELYLKRLVV 246
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y LM TE+M++ +G+
Sbjct: 247 GGFEKVFEINRNFRNEGLSTRHNPEFTMLEFYWAYADYHDLMDLTEQMLRGAAESVLGSA 306
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKK-----INPKFNQ 294
+ QG DF K FE++T++EAI KY P+ + ++ N + +E+ + + P +
Sbjct: 307 QFTSQGVDYDFGKPFERMTVLEAIVKYMPEVS-LEQLNDMNTATEIAEQVGVSVKPSWGL 365
Query: 295 KKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFI 354
K+ Q+ +FE E +L PT+IT YP E+SPLAR+ + +N +T+RFE F
Sbjct: 366 GKV---------QIEIFETVAEHRLIQPTFITAYPAEVSPLARRHD-DNPFVTDRFEFFA 415
Query: 355 IGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGI 414
G E+ANGFSELND E+Q+ RF+ Q++ K E + + +YD DY+ ALE+GMPP +G GI
Sbjct: 416 GGRELANGFSELNDAEDQAERFREQVEQK-EAGDDEAMFYDEDYVTALEHGMPPTAGQGI 474
Query: 415 GVDRLIMLLTNSKNIRDVILFPHLR 439
G+DRL+MLLT+S +IRDV+LFPH+R
Sbjct: 475 GIDRLVMLLTDSASIRDVLLFPHMR 499
>gi|238792835|ref|ZP_04636466.1| Lysyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
gi|238727943|gb|EEQ19466.1| Lysyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
Length = 507
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 228/440 (51%), Positives = 313/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G+IQLY+S + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 77 MTRRIMGKASFVTLQDV-----GGRIQLYVSRDDLPEGIYNEEFKKWDLGDILGARGKLF 131
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI S L+L+TK+LRPLP+KF L++QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 132 KTKTGELSIHCSELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANDESRHTFKVRSQ 191
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
++S IR FM + FMEVETP++ PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 192 VMSGIRSFMVEKGFMEVETPMMQVIPGGASARPFVTHHNALDIDMYLRIAPELYLKRLVV 251
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEG+SPRHNPEFTM+E Y AY +Y L+ TE++ + + +G++
Sbjct: 252 GGFERVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYKDLIVLTEELFRTLTETVLGSS 311
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y + DF K F KLT+ EAI KY P+ N DL + + + + K + L
Sbjct: 312 VVQYGEQTFDFGKPFAKLTMKEAICKYRPETNVADLDDMDKALAIAESLGIKVEKSWGLG 371
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
++ +I FEET E+ L PT+IT YP E+SPLAR+ N +N IT+RFE FI G EI
Sbjct: 372 RVQCEI-----FEETAESHLIQPTFITEYPAEVSPLARR-NDDNPFITDRFEFFIGGREI 425
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q+ K E + + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 426 GNGFSELNDAEDQAQRFADQVSAK-EAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRM 484
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 485 VMLFTNSHTIRDVILFPAMR 504
>gi|418021322|ref|ZP_12660431.1| Lysyl-tRNA synthetase [Candidatus Regiella insecticola R5.15]
gi|347603330|gb|EGY28186.1| Lysyl-tRNA synthetase [Candidatus Regiella insecticola R5.15]
Length = 504
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 230/440 (52%), Positives = 313/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD + G IQLY+ + + + Y + FK +D+GDI+GA+GTLF
Sbjct: 75 MTRRIMGKASFVTLQD-----AGGCIQLYVERDNLPEEFYNEKFKKWDLGDILGAQGTLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI+ + L+L+TK+LRPLP+KF L++QE++YR RY+DLI+NE R+ FK R+Q
Sbjct: 130 KTQTGELSIRCTELRLLTKALRPLPDKFHGLADQEMRYRQRYLDLIVNEEARRTFKIRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+I+ +R FM FMEVETP++ PGGA+A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 LIAGMRQFMVDKGFMEVETPMMQVIPGGAVARPFITHHNALDIDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEG+S RHNPEFTM+E Y AY +Y LMK TE++ + + +GTT
Sbjct: 250 GGFERVFEINRNFRNEGLSSRHNPEFTMMELYMAYADYRDLMKLTEELFRTLTAAVLGTT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y + DF+K F +LT+ EAI +Y Q + DL + KI KI
Sbjct: 310 EVSYDDQKFDFAKPFARLTMKEAICQYCSQIDAPDLDK----MDKAVKIAQSLG-IKIDK 364
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
N +Q +FE T E L PT+IT YP E+SPLAR+ N +N IT+RFE FI G EI
Sbjct: 365 NWGLGRIQCEIFEATAEEHLVQPTFITEYPAEVSPLARR-NDDNPFITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF+ Q+ + + E + +YD DY+ ALE+GMPP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAERFEEQVKARTGGDSE-AMFYDKDYVTALEHGMPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS +IRDVILFP +R
Sbjct: 483 VMLFTNSYSIRDVILFPAMR 502
>gi|238752990|ref|ZP_04614449.1| Lysyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
gi|238708778|gb|EEQ01037.1| Lysyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
Length = 505
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 228/440 (51%), Positives = 312/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G+IQLY+S + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFVTLQDV-----GGRIQLYVSRDDLPEGVYNEEFKKWDLGDILGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI S L+L+TK+LRPLP+KF L++QE +YR RY+DLI N+ +RK FK R+Q
Sbjct: 130 KTKTGELSIHCSELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANDESRKTFKIRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
++S IR FM + FMEVETP++ PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 VMSGIRSFMVEKGFMEVETPMMQVIPGGASARPFVTHHNALDIDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEG+SPRHNPEFTM+E Y AY +Y L+ TE++ + + +G++
Sbjct: 250 GGFERVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYKDLIVLTEELFRTLTETVLGSS 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y + DF K F KLT+ EAI KY P+ N DL + + + + K + L
Sbjct: 310 VVQYGEQTFDFGKPFAKLTMKEAICKYRPETNVADLDDMDKAVAIAESLGIKIEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+Q +FEET E+ L PT+I YP E+SPLAR+ N +N IT+RFE FI G EI
Sbjct: 370 R-----IQCEIFEETAESHLIQPTFIIEYPAEVSPLARR-NDDNPFITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q+ K E + + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFADQVSAK-EAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|365847940|ref|ZP_09388421.1| lysine--tRNA ligase [Yokenella regensburgei ATCC 43003]
gi|364571532|gb|EHM49114.1| lysine--tRNA ligase [Yokenella regensburgei ATCC 43003]
Length = 506
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 232/440 (52%), Positives = 308/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SFI LQD G +IQLY + + + + +Y D FK +D+GDII A+G LF
Sbjct: 76 MTRRIMGKASFITLQDVGG-----RIQLYAARDDLPEGVYNDQFKKWDLGDIIAARGKLF 130
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 131 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLIANDESRNTFKIRSQ 190
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ +R FM FMEVETP++ PGGA A+PFITHHN+L+M M+LRIAPELYLKRL++
Sbjct: 191 ILAGMRKFMVGRGFMEVETPMMQVIPGGASARPFITHHNALDMDMYLRIAPELYLKRLVV 250
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +G T
Sbjct: 251 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGKT 310
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y DF K F KLT+ EAIKKY P+ N DL N K+ + I + L
Sbjct: 311 EVPYGEHTFDFGKPFVKLTMREAIKKYRPETNMADLDNFDAAKAIAESIGIHVEKSWGLG 370
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 371 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 424
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q++ K + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 425 GNGFSELNDAEDQAQRFLDQVNAKAAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 483
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP LR
Sbjct: 484 VMLFTNSHTIRDVILFPALR 503
>gi|292487147|ref|YP_003530017.1| lysyl-tRNA synthetase [Erwinia amylovora CFBP1430]
gi|291552564|emb|CBA19609.1| lysyl-tRNA synthetase [Erwinia amylovora CFBP1430]
Length = 506
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 230/440 (52%), Positives = 319/440 (72%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY+S + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVSRDDLAEGIYNEQFKKWDLGDILGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI S L+L+TK+LRPLP+KF L++QE +YR RY+DLI N+++R FK R+Q
Sbjct: 130 KTKTGELSIHCSELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANDDSRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR+FM DFMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 IMAGIRNFMVGRDFMEVETPMMQAIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF+++FEIN+NFRNEGISPRHNPEFTM+E Y AY +Y L++ TE + + + + +G+T
Sbjct: 250 GGFDRVFEINRNFRNEGISPRHNPEFTMMELYMAYADYEDLIELTESLFRTLAQNVLGST 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y + DF + F KLT+ EAI KY PQ + DL + F KS + N +K
Sbjct: 310 LVPYGDQQFDFGQPFAKLTMKEAILKYRPQTDLADLAD--FDKSVAIAQSLGINVEKSW- 366
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
L + + + +FEET + L PT+IT YP E+SPLAR++++ + IT+RFE FI EI
Sbjct: 367 GLGRVVTE--IFEETAKEHLIQPTFITEYPAEVSPLARRNDV-DPEITDRFEFFIGDREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND ++Q+ RF Q++ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAQDQAERFLQQVNAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP LR
Sbjct: 483 VMLFTNSHTIRDVILFPALR 502
>gi|311278190|ref|YP_003940421.1| lysyl-tRNA synthetase [Enterobacter cloacae SCF1]
gi|308747385|gb|ADO47137.1| lysyl-tRNA synthetase [Enterobacter cloacae SCF1]
Length = 506
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 231/440 (52%), Positives = 308/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY + + + + +Y D FK +D+GDII A+G LF
Sbjct: 76 MTRRIMGKASFVTLQDVGG-----RIQLYAARDDLPEGVYNDQFKKWDLGDIIAARGKLF 130
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 131 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLIANDESRNTFKIRSQ 190
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ +R FM FMEVETP++ PGGA A+PFITHHN+L+M M+LRIAPELYLKRL++
Sbjct: 191 ILAGMRKFMVGRGFMEVETPMMQVIPGGASARPFITHHNALDMDMYLRIAPELYLKRLVV 250
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +G T
Sbjct: 251 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGKT 310
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y DF K F KLT+ EAIKKY P+ N DL N K+ + I + L
Sbjct: 311 EVPYGEHTFDFGKPFVKLTMREAIKKYRPETNMADLDNFDAAKAIAESIGIHVEKSWGLG 370
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 371 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 424
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q++ K + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 425 GNGFSELNDAEDQAQRFLDQVNAKAAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 483
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP LR
Sbjct: 484 VMLFTNSHTIRDVILFPALR 503
>gi|309785303|ref|ZP_07679934.1| lysyl-tRNA synthetase [Shigella dysenteriae 1617]
gi|308926423|gb|EFP71899.1| lysyl-tRNA synthetase [Shigella dysenteriae 1617]
Length = 505
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 231/440 (52%), Positives = 311/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDDLPEGVYNEQFKKWDLGDILGAKGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+S IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + + +G T
Sbjct: 250 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQNILGKT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y LDF K FEKLT+ EAIKKY + + DL N K+ + I + L
Sbjct: 310 EVTYGDVTLDFGKPFEKLTMREAIKKYRSETDMADLDNFDSAKAIAESIGIHVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 370 RIVTEI-----FEEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q+ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFLDQVAAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|311280819|ref|YP_003943050.1| lysyl-tRNA synthetase [Enterobacter cloacae SCF1]
gi|308750014|gb|ADO49766.1| lysyl-tRNA synthetase [Enterobacter cloacae SCF1]
Length = 506
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 231/440 (52%), Positives = 308/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY + + + + +Y D FK +D+GDII A+G LF
Sbjct: 76 MTRRIMGKASFVTLQDVGG-----RIQLYAARDDLPEGVYNDRFKKWDLGDIIAARGKLF 130
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 131 KTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLIANDESRNTFKIRSQ 190
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ +R FM FMEVETP++ PGGA A+PFITHHN+L+M M+LRIAPELYLKRL++
Sbjct: 191 ILAGMRKFMVGRGFMEVETPMMQVIPGGASARPFITHHNALDMDMYLRIAPELYLKRLVV 250
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + D +G T
Sbjct: 251 GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGKT 310
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ Y DF K F KLT+ EAIKKY P+ N DL N K+ + I + L
Sbjct: 311 EVPYGEHTFDFGKPFVKLTMREAIKKYRPETNMADLDNFDAAKAIAESIGIHVEKSWGLG 370
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I F+E E L PT+IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 371 RIVTEI-----FDEVAEAHLIQPTFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 424
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q++ K + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 425 GNGFSELNDAEDQAQRFLDQVNAKAAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 483
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP LR
Sbjct: 484 VMLFTNSHTIRDVILFPALR 503
>gi|238783658|ref|ZP_04627678.1| Lysyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
gi|238715371|gb|EEQ07363.1| Lysyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
Length = 505
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 228/440 (51%), Positives = 314/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G+IQLY+S + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFVTLQDV-----GGRIQLYVSRDDLPEGVYNEEFKKWDLGDILGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI S L+L+TK+LRPLP+KF L++QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCSELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
++S IR FM + FMEVETP++ PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 VMSGIRSFMVEKGFMEVETPMMQVIPGGASARPFVTHHNALDIDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEG+SPRHNPEFTM+E Y AY +Y L+ TE++ + + + +G++
Sbjct: 250 GGFERVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYKDLIVLTEELFRTLTENILGSS 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y + DF K F KLT+ EAI KY P+ N DL + + + + K + L
Sbjct: 310 VVQYGEQTFDFGKPFVKLTMKEAICKYRPETNVADLDDMGKAVTIAESLGIKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
++ +I FEET E+ L PT+IT YP E+SPLAR+ N +N IT+RFE FI G EI
Sbjct: 370 RVQCEI-----FEETAESHLIQPTFITEYPAEVSPLARR-NDDNPFITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q+ K E + + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFADQVSAK-EAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|406940273|gb|EKD73089.1| hypothetical protein ACD_45C00465G0004 [uncultured bacterium]
Length = 501
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 225/439 (51%), Positives = 314/439 (71%), Gaps = 12/439 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M +R+MGK SF+ LQD +G KIQLY+ + I ++Y F +DIGDI+G KG LFK
Sbjct: 71 MTRRLMGKASFVHLQDMTG-----KIQLYVRQDEIAPDVYAAFLEWDIGDIVGVKGKLFK 125
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS++ ++L+TKSLRPLP+K+ L++QE++YR RY+DL++NE TR +F RT+I
Sbjct: 126 TKTGELSVRTQHIELLTKSLRPLPDKYHGLTDQELRYRQRYLDLMMNEATRHIFLIRTKI 185
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I +IR F++ DF+EVETP++ PGGA A+PF+THHN L+M ++LRIAPELYLKRL++G
Sbjct: 186 IEAIRQFLQARDFLEVETPMMQVLPGGAAARPFVTHHNVLDMSLYLRIAPELYLKRLVVG 245
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+S RHNPEFTM+EFY Y +Y LM +E++++ + + TT
Sbjct: 246 GFERVFEINRNFRNEGLSTRHNPEFTMLEFYQGYADYHDLMNLSEELMRYLADTILQTTT 305
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQG+++D SK F ++T+ ++I + P+ + DL + KK+ + L
Sbjct: 306 LTYQGQVVDLSKPFMRMTLFDSILHFNPKLKKTDLDTLPAAQKIAKKLEIPVQESHGLGK 365
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
++ DI FE+T E +L PT+IT YP E+SPLAR+ N +N +T+RFE+F G EIA
Sbjct: 366 IQLDI-----FEKTVEDQLIQPTFITEYPAEVSPLARR-NDQNAFVTDRFEMFAAGREIA 419
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RF+ Q K + E + YD DYI ALEYGMPP +G GIG+DRL+
Sbjct: 420 NGFSELNDAEDQAERFRKQAAEKAAGDEE-AMPYDEDYITALEYGMPPTAGEGIGIDRLV 478
Query: 421 MLLTNSKNIRDVILFPHLR 439
ML T+S +IRDVILFPH+R
Sbjct: 479 MLFTDSPSIRDVILFPHMR 497
>gi|406942130|gb|EKD74443.1| hypothetical protein ACD_44C00447G0003 [uncultured bacterium]
Length = 505
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 225/440 (51%), Positives = 316/440 (71%), Gaps = 12/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M++RVMGK SF++LQD SG +IQ+Y + +G+ Y K++D+GDI+G +G LFK
Sbjct: 76 MMRRVMGKASFLLLQDVSG-----RIQIYAALNELGEEAYEKAKHFDLGDIVGVEGLLFK 130
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T T EL+I+ ++L+TK+LRPLP+KF L +QE +YR RY+DLI NE TRK+F R+ +
Sbjct: 131 TKTNELTIRAKKVRLLTKALRPLPDKFHGLVDQEQRYRQRYLDLISNEETRKIFLTRSSL 190
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
IS++R+F+ +F+EVETP++H PGGA A+PF+THH++L+M M+LR+APEL+LKRL++G
Sbjct: 191 ISALRNFLIDKEFLEVETPMMHVIPGGATARPFVTHHHALSMDMYLRVAPELFLKRLVVG 250
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY NY LM+ TE+M++ + + T
Sbjct: 251 GFEKVFEINRNFRNEGLSTRHNPEFTMVEFYQAYANYQDLMQLTEEMMRYLAKTVLKNTV 310
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQG DF K F +T+ EA+ Y P+ ++++++ L+ K+ + L
Sbjct: 311 VSYQGEQYDFEKPFRSMTLKEALLHYNPRLTTLEVESRDQLRQFALKLQIPVQGTEGLGK 370
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
L+ +I FE+T E L PT+IT YPTE+SPLAR +N ++ +T+RFE F+ G EIA
Sbjct: 371 LQYEI-----FEKTVEANLKEPTFITAYPTEVSPLARANN-QDPFVTDRFEFFVGGREIA 424
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF Q++ K E E + +YD DY+ ALEYGMPP +G GIG+DRL
Sbjct: 425 NGFSELNDPEDQASRFIKQVE-KKEAGDEEAMHYDADYLTALEYGMPPTAGEGIGIDRLT 483
Query: 421 MLLTNSKNIRDVILFPHLRN 440
ML T+ +IRDVILFPHLR
Sbjct: 484 MLFTDQPSIRDVILFPHLRT 503
>gi|345872418|ref|ZP_08824353.1| Lysyl-tRNA synthetase [Thiorhodococcus drewsii AZ1]
gi|343918966|gb|EGV29723.1| Lysyl-tRNA synthetase [Thiorhodococcus drewsii AZ1]
Length = 515
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 223/447 (49%), Positives = 319/447 (71%), Gaps = 21/447 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFK-NYDIGDIIGAKGTLF 59
M +RVMGK SF +QD SG +IQL++ + IG+ Y FK + D+GDI+G +G LF
Sbjct: 85 MTRRVMGKASFAHIQDMSG-----RIQLFVQRDQIGQEAYASFKRDLDLGDILGVEGVLF 139
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI+ S++L+TK+LRPLP KF L++ E +YR RY+DLI+N R+ F+ RT
Sbjct: 140 KTKTGELSIRCESIRLLTKALRPLPEKFHGLTDMESRYRQRYLDLIMNSTARETFRVRTA 199
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+ IR ++ F+EVETP++ PGGA+A+PF+THHN+L+M++FLRIAPEL+LKRL++
Sbjct: 200 IVQFIRDYLNARSFLEVETPMMQVIPGGAVARPFVTHHNALDMQLFLRIAPELFLKRLVV 259
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF +++EIN+NFRNEG+S RHNPEFTM+EFY AY +Y LM TE M++++ ++ +G T
Sbjct: 260 GGFERVYEINRNFRNEGLSTRHNPEFTMLEFYEAYADYRDLMDLTEDMLRRMALEVLGRT 319
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYN--EIDLQNKLFLKSELK--KINPKFNQK 295
+I YQG DF K F ++++ ++I ++ P EID ++ +E K+ P +
Sbjct: 320 EIQYQGETYDFGKPFARMSVRDSILRFNPDLTAEEIDDLDRAKQVAERLGIKLKPTWGLG 379
Query: 296 KILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFII 355
K+ Q+ +FE T E +L +PT+IT YPTE+SPLAR+ N E+ +T+RFE F+
Sbjct: 380 KV---------QIEIFEMTVEGRLMDPTFITRYPTEVSPLARR-NDEDPFVTDRFEFFVG 429
Query: 356 GNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIG 415
G EIANGFSELND E+Q+ RF+ Q+ K+ + E + +YD DY+ ALE+GMPP +G GIG
Sbjct: 430 GREIANGFSELNDAEDQAERFRQQVAEKDAGDQE-AMFYDADYVRALEHGMPPTAGEGIG 488
Query: 416 VDRLIMLLTNSKNIRDVILFPHLRNEN 442
+DRL+ML T+S +IRDV+LFPH+R E
Sbjct: 489 IDRLVMLFTDSPSIRDVLLFPHMRPET 515
>gi|451966761|ref|ZP_21920012.1| lysyl-tRNA synthetase [Edwardsiella tarda NBRC 105688]
gi|451314433|dbj|GAC65374.1| lysyl-tRNA synthetase [Edwardsiella tarda NBRC 105688]
Length = 505
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 225/440 (51%), Positives = 317/440 (72%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G+IQLYI+ + + ++Y++ FK +D+GDIIGA+G LF
Sbjct: 75 MTRRIMGKASFVTLQDM-----GGRIQLYIARDDLKDDVYSEQFKKWDLGDIIGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
+T TGELSI S++L+TK+LRPLP+KF L++QE +YR RY+DLI NE++R+ F+ R++
Sbjct: 130 RTQTGELSIHCHSIRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANESSRETFRTRSK 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+++IR+FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAAIRNFMVNKGFMEVETPMMQVIPGGASARPFITHHNALDIDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEG+SPRHNPEFTM+E Y AY +Y L+ TE++ + I D +G++
Sbjct: 250 GGFERVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYKDLIVLTEELFRTISQDVLGSS 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y + DFSK F K+++ EAI Y P DL + + + K + L
Sbjct: 310 VVQYGDQTFDFSKPFIKMSMKEAICHYRPDIASADLDDMEKACKIAESLGIKIEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+Q +F+ET E++L PT+IT YP E+SPLAR+ N EN IT+RFE FI G EI
Sbjct: 370 R-----VQCEIFDETAESQLIQPTFITEYPAEVSPLARR-NDENPFITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF++Q+ K+ + E + +YD DY+ ALE+G+PP +G G+G+DR+
Sbjct: 424 GNGFSELNDAEDQAERFQDQVKAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGVGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 MMLFTNSHTIRDVILFPAMR 502
>gi|334143922|ref|YP_004537078.1| Lysyl-tRNA synthetase [Thioalkalimicrobium cyclicum ALM1]
gi|333964833|gb|AEG31599.1| Lysyl-tRNA synthetase [Thioalkalimicrobium cyclicum ALM1]
Length = 506
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 227/444 (51%), Positives = 320/444 (72%), Gaps = 21/444 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
ML+R+MGK SF LQD SG +IQ Y++ + + + Y + FK +D+GDI+G G LF
Sbjct: 77 MLRRIMGKASFATLQDMSG-----RIQAYVTRDELPEGFYNEQFKRWDLGDIVGVSGYLF 131
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KTNT ELSI V S++LITK+LRPLP+KF L +QE++YR RY+DLI++E +R+ F+ R++
Sbjct: 132 KTNTDELSIHVESIELITKALRPLPDKFHGLQDQEVRYRQRYLDLIMSEQSRRTFETRSK 191
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+I ++R F + FMEVETP++ PGGA AKPF+THHN+L+M ++LRIAPELYLKRL++
Sbjct: 192 VIHAMREFFVRKGFMEVETPMMQVIPGGASAKPFVTHHNALDMPLYLRIAPELYLKRLLV 251
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +YI +M +TE+M K++ +G+
Sbjct: 252 GGFEKVFEINRNFRNEGLSTRHNPEFTMVEFYEAYADYIDMMDYTEEMFKELAQMVLGSG 311
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKK----INPKFNQK 295
++ YQG++ F K F ++T+ ++I Y DL + + S +K I P +
Sbjct: 312 QVPYQGQVFHFDKPFARITMKDSIALYNEGVKVEDLDDIEYCISLAEKLKIDIRPGYGLG 371
Query: 296 KILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFII 355
KI Q +FEET E +L +PT+IT YP E+SPLAR+ N N +T+RFELFI
Sbjct: 372 KI---------QTEIFEETVEHRLMDPTFITEYPAEVSPLARR-NDANPFVTDRFELFIG 421
Query: 356 GNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIG 415
G E+ANGFSELND E+Q+ RF +Q+ K+ + E + +YD D+I ALE+GMPPA+G GIG
Sbjct: 422 GRELANGFSELNDAEDQAERFMDQVRAKDAGDDE-AMHYDADFITALEHGMPPAAGQGIG 480
Query: 416 VDRLIMLLTNSKNIRDVILFPHLR 439
+DRL+ML T++ +I+DV+LFPH+R
Sbjct: 481 IDRLVMLFTDAASIKDVLLFPHMR 504
>gi|384084122|ref|ZP_09995297.1| lysyl-tRNA synthetase [Acidithiobacillus thiooxidans ATCC 19377]
Length = 493
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 214/441 (48%), Positives = 314/441 (71%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M +RVMGK SF +QD SG +IQL++S + +G+ Y FK D GDIIG +GTLF+
Sbjct: 65 MTRRVMGKASFADIQDQSG-----RIQLFVSRDALGEEHYARFKALDFGDIIGVEGTLFR 119
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+KV SL+L++K+LRPLP K+ LS+ E ++R RY+DLI+ E+ R+ F+ R +
Sbjct: 120 TKTGELSLKVHSLQLLSKALRPLPEKWHGLSDPETRFRQRYVDLIVTESARRTFQIRAET 179
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
++++R + + F E ETP++H PGGA A+PF+THH++L+M ++LRIAPELYLKRL++G
Sbjct: 180 VAALREGLRQRGFFEAETPMMHVIPGGATARPFMTHHHALDMTLYLRIAPELYLKRLVVG 239
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN+NFRNEG+S RHNPEFTM+E+Y AY +Y M TE +I+ +G T+
Sbjct: 240 GIEQVFEINRNFRNEGVSTRHNPEFTMLEWYEAYADYRDAMDLTETLIRAAAQAALGDTR 299
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQG +D K+F ++++ E+++ Y P + DL++ L ++L +++
Sbjct: 300 IQYQGLEIDLGKAFVRMSVSESVRAYNPDLADADLRDPEVLAAKLAQMHMPCEASW---G 356
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
K +++ +FE+T E L PT+IT YP E+SPLAR++++ + +T+RFEL I G E+A
Sbjct: 357 WGKRLIE--IFEKTVEGNLQQPTFITEYPLEVSPLARRNDL-DPEVTDRFELMIAGRELA 413
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF+ Q++ K+ E + +YD DYI ALEYGMPP +G G+G+DRL+
Sbjct: 414 NGFSELNDPEDQAARFRAQVEAKD-AGDEEAMFYDADYIRALEYGMPPTAGVGLGIDRLV 472
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLL + +IR+VILFPHLR E
Sbjct: 473 MLLADQPSIREVILFPHLRPE 493
>gi|238754560|ref|ZP_04615914.1| Lysyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
gi|238707191|gb|EEP99554.1| Lysyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
Length = 505
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 229/440 (52%), Positives = 313/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G+IQLY+S + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFVTLQDV-----GGQIQLYVSRDDLPEGVYNEEFKKWDLGDILGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI S L+L+TK+LRPLP+KF L++QE +YR RY+DLI N+ +R FK R++
Sbjct: 130 KTKTGELSIHCSELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANDESRNTFKVRSR 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
++S IR FM + FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 VMSGIRQFMVEKGFMEVETPMMQVIPGGASARPFITHHNALDIDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEG+SPRHNPEFTM+E Y AY +Y L+ TE++ + + +G++
Sbjct: 250 GGFERVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYKDLIVLTEELFRTLTETILGSS 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y + DF K F KLT+ EAI KY P+ N DL + + + + K + L
Sbjct: 310 VVKYGEQEFDFGKPFTKLTMKEAICKYRPETNVADLDDMDKAVAIAESLGIKIEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+Q +FEET E+ L PT+IT YP E+SPLAR+ N +N IT+RFE FI G EI
Sbjct: 370 R-----VQCEIFEETAESHLIQPTFITEYPAEVSPLARR-NDDNPFITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF Q+ K+E + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAERFAEQVRAKDEGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|406914713|gb|EKD53864.1| hypothetical protein ACD_60C00143G0006 [uncultured bacterium]
Length = 500
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 224/439 (51%), Positives = 316/439 (71%), Gaps = 12/439 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M +R+MGK SF+ LQD SG KIQLYI + + +Y F +DIGDIIG +G LFK
Sbjct: 70 MTRRLMGKASFVHLQDMSG-----KIQLYIRQDEVKPEIYEAFLEWDIGDIIGVQGILFK 124
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS++ ++L+TKSLRPLP+K+ L++QE++YR RY+DL++NE TR+ F RT+I
Sbjct: 125 TKTGELSVRAQKIELLTKSLRPLPDKYHGLTDQELRYRQRYLDLMMNETTRQTFLMRTKI 184
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+ +IR F+++ DF+EVETP++ PGGA A+PF+THHN L+M ++LRIAPELYLKRL++G
Sbjct: 185 VDAIRQFLKERDFLEVETPMMQILPGGAAARPFVTHHNVLDMPLYLRIAPELYLKRLVVG 244
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF +++EIN+NFRNEG+S RHNPEFTM+EFY AY +Y LM +E++++ + TT
Sbjct: 245 GFERVYEINRNFRNEGLSTRHNPEFTMLEFYQAYADYHDLMDLSEELMRYLAQSLFQTTM 304
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQ + +D SK F ++T++E+I + P++ + DL L + K+++ + L
Sbjct: 305 LSYQDQTIDLSKPFIRMTLLESILHFNPKFKKADLDTLLGAQKIAKQLDIPTQENHGLGK 364
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
++ DI FE+T E +L PT+IT YP E+SPLAR N +N +T+RFE+F+ G EIA
Sbjct: 365 IQCDI-----FEKTVEDQLIQPTFITEYPAEVSPLAR-CNDQNPFVTDRFEMFVGGREIA 418
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND ++Q+ RF+ Q+ E + + YD DYI ALEYGMPP +G GIG+DRL+
Sbjct: 419 NGFSELNDADDQAERFRKQV-CNKEAGDDEAMPYDEDYIMALEYGMPPTAGEGIGIDRLV 477
Query: 421 MLLTNSKNIRDVILFPHLR 439
ML TNS +IRDVILFPH+R
Sbjct: 478 MLFTNSPSIRDVILFPHMR 496
>gi|238796546|ref|ZP_04640053.1| Lysyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
gi|238719524|gb|EEQ11333.1| Lysyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
Length = 505
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 227/440 (51%), Positives = 313/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY+S + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVSRDDLPEGVYNEEFKKWDLGDILGARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L++QE +YR RY+DLI N+ +R FK R+Q
Sbjct: 130 KTKTGELSIHCNELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANDESRNTFKVRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
++S IR FM + FMEVETP++ PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 VMSGIRSFMVEKGFMEVETPMMQVIPGGASARPFVTHHNALDIDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEG+SPRHNPEFTM+E Y AY +Y L+ TE++ + + + +G++
Sbjct: 250 GGFERVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYKDLIVLTEELFRTLTENILGSS 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y + DF K F KLT+ EAI KY P+ N DL + + + + K + L
Sbjct: 310 VVQYGEQTFDFGKPFAKLTMKEAICKYRPETNVADLDDMDKALAIAESLGIKVEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+Q +FEET E+ L PT+IT YP E+SPLAR+ N +N IT+RFE FI G EI
Sbjct: 370 R-----VQCEIFEETAESHLIQPTFITEYPAEVSPLARR-NDDNPFITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q+ K E + + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAQRFADQVSAK-EAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 VMLFTNSHTIRDVILFPAMR 502
>gi|381159719|ref|ZP_09868951.1| lysyl-tRNA synthetase (class II) [Thiorhodovibrio sp. 970]
gi|380877783|gb|EIC19875.1| lysyl-tRNA synthetase (class II) [Thiorhodovibrio sp. 970]
Length = 524
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 222/441 (50%), Positives = 316/441 (71%), Gaps = 15/441 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFK-NYDIGDIIGAKGTLF 59
M +RVMGK SF LQD SG ++QL++ + IG Y FK DIGDI GA+G LF
Sbjct: 71 MSRRVMGKASFAHLQDMSG-----RMQLFVQRDRIGDEAYAWFKKELDIGDICGAEGLLF 125
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELS+KV L+L+TKSLR LP KF L++QE +YR RY+DLI+N+ TR F+ RT
Sbjct: 126 KTKTGELSVKVDELRLLTKSLRALPEKFHGLADQETRYRQRYLDLIMNDATRATFRVRTA 185
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+I IR+++ DF+EVETP++ PGGA+A+PF+THHN+L+M++FLRIAPELYLKRL++
Sbjct: 186 VIQFIRNYLNGLDFLEVETPMMQAIPGGALARPFVTHHNALDMQLFLRIAPELYLKRLVV 245
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF +++EIN+NFRNEG+S RHNPEFTM+EFY AY +Y LM TE ++++++ +G T
Sbjct: 246 GGFERVYEINRNFRNEGLSTRHNPEFTMLEFYQAYADYHNLMDLTEDLLRRLVQQVLGGT 305
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ YQG D +K F++L++ E+I + P+ D+ + +++ L
Sbjct: 306 ELSYQGETYDLAKPFQRLSVRESILAFNPELGSADIDELDPARRVAERLGIPLKASYGLG 365
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+Q+ +FE+T E++L PT+IT YP E+SPLAR+ N N +T+RFE F+ G EI
Sbjct: 366 K-----VQIEIFEKTVESRLMEPTFITEYPLEVSPLARR-NDHNPFVTDRFEFFVAGREI 419
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSS-YYDTDYIHALEYGMPPASGCGIGVDR 418
ANGFSELND E+Q+ RF+ Q++ ++ G+L + ++D DYI ALE+GMPP +G GIG+DR
Sbjct: 420 ANGFSELNDAEDQAERFRRQVE--DKAAGDLEAMHFDADYISALEHGMPPTAGEGIGIDR 477
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLT++ +IRDV+LFPH+R
Sbjct: 478 LVMLLTDAPSIRDVLLFPHMR 498
>gi|345863107|ref|ZP_08815320.1| lysine--tRNA ligase [endosymbiont of Tevnia jerichonana (vent
Tica)]
gi|345125990|gb|EGW55857.1| lysine--tRNA ligase [endosymbiont of Tevnia jerichonana (vent
Tica)]
Length = 498
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 221/443 (49%), Positives = 322/443 (72%), Gaps = 13/443 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLY-TDFKNYDIGDIIGAKGTLF 59
M +RVMGK SF +QD +G ++QL++ + + + Y T FK +DIGDIIGA+G LF
Sbjct: 68 MSRRVMGKASFAHVQDMTG-----RMQLFVQRDALEEGFYNTQFKKWDIGDIIGAEGVLF 122
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELS+KV S++L+TKSLRPLP KF +++QE++YR RY+DLI+NE++R+ F+ RTQ
Sbjct: 123 KTKTGELSVKVESIRLLTKSLRPLPEKFHGITDQELRYRQRYVDLIMNEDSRRTFRIRTQ 182
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
++ IR+++ FMEVETP++ PGGA A+PF T HN+LNM++FLRIAPELYLKRL++
Sbjct: 183 VVQFIRNYLNGRGFMEVETPMMQVIPGGATARPFTTQHNALNMELFLRIAPELYLKRLVV 242
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF +++EIN+NFRNEG+S RHNPEFTM+EFY AYT+Y LM TE M++ + + +G+T
Sbjct: 243 GGFERVYEINRNFRNEGLSTRHNPEFTMLEFYEAYTDYHGLMDLTEDMLRHLCEEVLGST 302
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ YQG DF F ++T+ ++I + + +L + ++ +++ L
Sbjct: 303 SVTYQGESYDFGSPFRRMTVKDSILHFNDDISAEELDDLDRARAIAERLEIPLKASYGLG 362
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+Q+ +FE+T E +L +PT+IT YPTE+SPLAR+ N ++ +T+RFE F+ G EI
Sbjct: 363 K-----VQIEIFEKTVEHQLMDPTFITAYPTEVSPLARR-NDDDPFVTDRFEFFVGGREI 416
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
ANGFSELND E+Q+ RF+ Q++ K+ + E + ++D DY+ ALE+GMPP +G GIG+DRL
Sbjct: 417 ANGFSELNDAEDQAERFRKQVEEKDAGDDE-AMHFDEDYVRALEHGMPPTAGEGIGIDRL 475
Query: 420 IMLLTNSKNIRDVILFPHLRNEN 442
+MLLT+S +IRDV+LFPH+R E
Sbjct: 476 VMLLTDSPSIRDVLLFPHMRPEG 498
>gi|344344358|ref|ZP_08775221.1| Lysyl-tRNA synthetase [Marichromatium purpuratum 984]
gi|343804028|gb|EGV21931.1| Lysyl-tRNA synthetase [Marichromatium purpuratum 984]
Length = 509
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 221/448 (49%), Positives = 312/448 (69%), Gaps = 23/448 (5%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFK-NYDIGDIIGAKGTLF 59
M +RVMGK SF +QD+SG +IQL++ + +G + Y FK + D+GDI+G +G LF
Sbjct: 74 MSRRVMGKASFAHIQDSSG-----RIQLFVQRDQLGTDAYQAFKRDLDLGDILGVEGVLF 128
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
+T TGELS+K S++L+TKSLRPLP KF L++ E +YR RY+DLI+N TR+ F+ RT
Sbjct: 129 RTRTGELSVKCESVRLLTKSLRPLPEKFHGLTDMESRYRQRYLDLIMNATTRETFRVRTA 188
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+ +R ++ ++EVETP++ PGGA+A+PF+THHN+L+M +FLRIAPEL+LKRL++
Sbjct: 189 IVQFMREYLNARGYLEVETPMMQVIPGGAVARPFVTHHNALDMDLFLRIAPELFLKRLVV 248
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF +++EIN+NFRNEG+S RHNPEFTM+EFY AY +Y LM TE M++ + +G T
Sbjct: 249 GGFEQVYEINRNFRNEGLSTRHNPEFTMLEFYQAYADYRDLMDLTEDMLRAMAERVLGRT 308
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQN----KLFLKSELKKINPKFNQK 295
+DYQG DF K F ++T+ EAI + P D+ + + + P +
Sbjct: 309 TLDYQGASYDFGKPFARMTVREAILHFNPALTAADIDELDAARCVAEGMGIAVKPSWGLG 368
Query: 296 KILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFII 355
K+ Q+ LFE T E +L +PT+IT YPTE+SPLAR+ N N +T+RFE F+
Sbjct: 369 KV---------QIELFEHTAEHRLMDPTFITEYPTEVSPLARR-NDANPFVTDRFEFFVG 418
Query: 356 GNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSS-YYDTDYIHALEYGMPPASGCGI 414
G E+ANGFSELND E+Q+ RF+ Q++ K G+L + YYD DY+ ALE+GMPP +G GI
Sbjct: 419 GRELANGFSELNDAEDQAERFRKQVEEKE--AGDLEAMYYDADYVRALEHGMPPTAGEGI 476
Query: 415 GVDRLIMLLTNSKNIRDVILFPHLRNEN 442
G+DRL+ML T++ +IRDV+LFPH+R E
Sbjct: 477 GIDRLVMLFTDAPSIRDVLLFPHMRPEG 504
>gi|344341313|ref|ZP_08772234.1| Lysyl-tRNA synthetase [Thiocapsa marina 5811]
gi|343798893|gb|EGV16846.1| Lysyl-tRNA synthetase [Thiocapsa marina 5811]
Length = 512
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 227/447 (50%), Positives = 316/447 (70%), Gaps = 23/447 (5%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFK-NYDIGDIIGAKGTLF 59
M +RVMGK SF +QD SG +IQL++ +++G++ Y FK +YD+GDI+GA+G LF
Sbjct: 80 MSRRVMGKASFAHVQDMSG-----RIQLFVQRDLVGEDAYAVFKRDYDLGDILGAEGLLF 134
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSIK S++L+TK+LRPLP KF L++ E +YR RY+DLI+N TR F RT+
Sbjct: 135 KTKTGELSIKCDSIRLLTKALRPLPEKFHGLTDMESRYRQRYLDLIMNGGTRDTFLIRTR 194
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+I IR ++ ++EVETP++ PGGA+A+PF+THHN+L+M++FLRIAPEL+LKRL++
Sbjct: 195 VIQFIRDYLNARGYLEVETPMMQVIPGGAVARPFVTHHNALDMQLFLRIAPELFLKRLVV 254
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GG K++EIN+NFRNEG+S RHNPEFTM+EFY AY +Y LM TE+M++ + +G T
Sbjct: 255 GGLEKVYEINRNFRNEGLSTRHNPEFTMLEFYEAYADYRDLMDLTEQMLRAMAEQVLGRT 314
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKIN----PKFNQK 295
I YQG DF + F ++T+ EAI + P D+ + ++ ++ P +
Sbjct: 315 LIHYQGEDYDFGQPFARMTVREAILHFNPDLGPGDVDDLDGARAVAARLGIALKPGWGLG 374
Query: 296 KILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFII 355
K+ Q+ LFE T E +L PT+IT YPTE+SPLAR+ N EN +T+RFE F+
Sbjct: 375 KV---------QIELFEHTAEHRLMAPTFITQYPTEVSPLARR-NDENPFVTDRFEFFVG 424
Query: 356 GNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSS-YYDTDYIHALEYGMPPASGCGI 414
G EIANGFSELND E+Q+ RF+ Q+ K+ G+L + Y+D DYI ALE+GMPP +G GI
Sbjct: 425 GREIANGFSELNDAEDQAERFRQQVAEKD--AGDLEAMYFDADYIRALEHGMPPTAGEGI 482
Query: 415 GVDRLIMLLTNSKNIRDVILFPHLRNE 441
G+DRL+ML T+S +IRDV+LFPH+R E
Sbjct: 483 GIDRLVMLFTDSPSIRDVLLFPHMRPE 509
>gi|386814652|ref|ZP_10101870.1| Lysyl-tRNA synthetase [Thiothrix nivea DSM 5205]
gi|386419228|gb|EIJ33063.1| Lysyl-tRNA synthetase [Thiothrix nivea DSM 5205]
Length = 517
Score = 476 bits (1226), Expect = e-132, Method: Compositional matrix adjust.
Identities = 231/446 (51%), Positives = 314/446 (70%), Gaps = 20/446 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR+MGK SF + D SG +IQLY ++G L+T++ ++D+GDII A GTLFK
Sbjct: 73 MLKRLMGKASFATISDVSG-----RIQLYTQKNVLGDELFTEYSHWDLGDIIWAAGTLFK 127
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+KV ++L+TKSLRPLP KF L++ E +YR RYIDLI+N TR F R++I
Sbjct: 128 TQTGELSVKVKEIRLLTKSLRPLPEKFHGLTDHEQRYRQRYIDLIMNHETRDAFVVRSKI 187
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+S IR+F + DF+EVETP+L PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++G
Sbjct: 188 VSYIRNFFIQRDFLEVETPMLQVIPGGATARPFITHHNALDLPMYLRIAPELYLKRLVVG 247
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+S RHNPEFTMIEFY AY Y LM TE +++ I D IG+++
Sbjct: 248 GFERVFEINRNFRNEGLSTRHNPEFTMIEFYQAYATYHDLMDLTEALMRGIATDVIGSSE 307
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYN--EID-LQNKLFLKSELK-KINPKFNQKK 296
+ YQG DFS+ F ++++ ++I + P +ID L+ + + L + + K
Sbjct: 308 VVYQGETFDFSQPFTRISVRDSILHFNPNVTGEQIDTLEGARAVATSLGIPLKDSYGLGK 367
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
+ Q+ +FE+T E +L PT+IT YP E+SPLAR+ N N IT+RFE F+ G
Sbjct: 368 V---------QIEIFEKTVEHRLMQPTFITEYPAEVSPLARR-NDANPFITDRFEFFVGG 417
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
EI NGFSELND E+Q+ RF Q+ K+ + E + +YD DY+ ALEYGMPP +G GIG+
Sbjct: 418 REIGNGFSELNDAEDQAERFMQQVADKDAGDDE-AMHYDADYVRALEYGMPPTAGQGIGI 476
Query: 417 DRLIMLLTNSKNIRDVILFPHLRNEN 442
DRL+ML T++ +IRDVILFPH+R E
Sbjct: 477 DRLVMLFTDAPSIRDVILFPHMRPEG 502
>gi|407716317|ref|YP_006837597.1| lysyl-tRNA synthetase [Cycloclasticus sp. P1]
gi|407256653|gb|AFT67094.1| Lysyl-tRNA synthetase [Cycloclasticus sp. P1]
Length = 502
Score = 476 bits (1226), Expect = e-132, Method: Compositional matrix adjust.
Identities = 225/442 (50%), Positives = 325/442 (73%), Gaps = 12/442 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M KRVMGK SF +QD +G ++QL++ + + + Y FK++DIGDI+ +G LFK
Sbjct: 73 MGKRVMGKASFAHIQDMTG-----RMQLFVQRDSLPEGHYQTFKSWDIGDILAVEGVLFK 127
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS++V+S++L+TKSL+PLP KF L++QE +YR RY+DLI+NE +RKVF+ R+++
Sbjct: 128 TKTGELSVRVASIRLLTKSLQPLPEKFHGLTDQEQRYRQRYVDLIMNEESRKVFQTRSKV 187
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+S IR ++ ++FMEVETP++H PGGA AKPF THHN+L+M++FLRIAPELYLKRL++G
Sbjct: 188 VSYIRQYLVDHNFMEVETPMMHVIPGGATAKPFATHHNALDMELFLRIAPELYLKRLVVG 247
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN++FRNEG+S RHNPEFTM+EFY A+++Y +M TE M++ + +GT
Sbjct: 248 GFERVFEINRSFRNEGLSTRHNPEFTMLEFYQAFSDYKDMMDLTEDMLRSLTERVLGTNI 307
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQG D K F ++++IE+I Y N+I +N L K ++ + + + ++
Sbjct: 308 VHYQGEDYDLGKPFRRMSVIESILHYN---NDITREN-LATKEAALEVTKRL-KIPVEDS 362
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
+Q+ +FE+T E KL PT+IT YPTE+SPLAR+S+ ++ +T+RFE F+ G E+A
Sbjct: 363 YGLGKIQIEIFEKTVEEKLHEPTFITEYPTEVSPLARRSD-KDPFVTDRFEFFVGGREVA 421
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RFK Q++ K E + + +YD DYI ALE GMPP +G GIG+DRL+
Sbjct: 422 NGFSELNDSEDQAERFKQQVEDK-EAGDDEAMHYDADYIRALEVGMPPTAGEGIGIDRLV 480
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
M LT+S +IRDVILFPH++ EN
Sbjct: 481 MFLTDSASIRDVILFPHMKLEN 502
>gi|197285859|ref|YP_002151731.1| lysyl-tRNA synthetase [Proteus mirabilis HI4320]
gi|227356360|ref|ZP_03840748.1| lysyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
gi|425068760|ref|ZP_18471876.1| lysyl-tRNA synthetase [Proteus mirabilis WGLW6]
gi|238693207|sp|B4F0M6.1|SYK_PROMH RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|194683346|emb|CAR44053.1| lysyl-tRNA synthetase [Proteus mirabilis HI4320]
gi|227163470|gb|EEI48391.1| lysyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
gi|404598660|gb|EKA99128.1| lysyl-tRNA synthetase [Proteus mirabilis WGLW6]
Length = 504
Score = 476 bits (1225), Expect = e-132, Method: Compositional matrix adjust.
Identities = 229/440 (52%), Positives = 312/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF LQD G +IQLY+S + + + +Y + FK +D+GDI+G +G +F
Sbjct: 74 MTRRIMGKASFATLQDMGG-----RIQLYVSRDDLPEGVYNEQFKKWDLGDILGGRGRVF 128
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L++QE +YR RY+DLI NEN+R FK R++
Sbjct: 129 KTKTGELSIHCTELRLLTKALRPLPDKFHGLADQETRYRQRYLDLISNENSRNTFKIRSK 188
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+S+IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 189 IMSAIRQFMVNKGFMEVETPMMQTIPGGASARPFITHHNALDIDMYLRIAPELYLKRLVV 248
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF+++FEIN+NFRNEG+SPRHNPEFTM+E Y AY +Y L++ TE++ + + D +G+T
Sbjct: 249 GGFDRVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYRDLIELTEELFRTLTQDVLGST 308
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y DF K FEKLT+ EAI KY P+ N DL + + + I K + L
Sbjct: 309 IVKYGDEEFDFGKPFEKLTMKEAICKYRPETNMADLDDMDKAVAIAQSIGIKIEKSWGLG 368
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+Q +FEE E+ L PT+I YP E+SPLAR+ N +N IT+RFE FI G EI
Sbjct: 369 R-----VQCEIFEEVAESHLIQPTFIIEYPAEVSPLARR-NDDNPFITDRFEFFIGGREI 422
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND ++Q+ RF+ Q+ K E + + ++D DYI ALE+G+PP +G GIG+DR+
Sbjct: 423 GNGFSELNDAQDQAERFEEQVRQK-EAGDDEAMFFDHDYITALEHGLPPTAGLGIGIDRM 481
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 482 VMLFTNSHTIRDVILFPAMR 501
>gi|238921195|ref|YP_002934710.1| lysyl-tRNA synthetase, putative [Edwardsiella ictaluri 93-146]
gi|259511526|sp|C5BAR6.1|SYK_EDWI9 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|238870764|gb|ACR70475.1| lysyl-tRNA synthetase, putative [Edwardsiella ictaluri 93-146]
Length = 505
Score = 476 bits (1225), Expect = e-132, Method: Compositional matrix adjust.
Identities = 226/440 (51%), Positives = 317/440 (72%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G+IQLY++ + + ++Y++ FK +D+GDIIGA+GTLF
Sbjct: 75 MTRRIMGKASFVTLQDM-----GGRIQLYVARDDLKDDVYSEQFKKWDLGDIIGARGTLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
+T TGELSI S+ L+TK+LRPLP+KF LS+QE +YR RY+DLI NE++R+ F+ R++
Sbjct: 130 RTQTGELSIHCHSIHLLTKALRPLPDKFHGLSDQETRYRQRYLDLIANESSRETFRTRSK 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+++IR+FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAAIRNFMVNKGFMEVETPMMQVIPGGASARPFITHHNALDIDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEG+SPRHNPEFTM+E Y AY +Y L+ TE++ + I D +G++
Sbjct: 250 GGFERVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYKDLIVLTEELFRTISQDVLGSS 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y + DF K F K+++ EAI Y P DL + + KI KI
Sbjct: 310 VVQYGDQTFDFGKPFIKMSMKEAICHYRPDIASADLDD----MDKACKIAESLG-IKIEK 364
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +Q +F+ET E++L PT+IT YP E+SPLAR+ N +N IT+RFE FI G EI
Sbjct: 365 SWGLGRVQCEIFDETAESQLIQPTFITEYPAEVSPLARR-NDDNPFITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF++Q+ K+ + E + +YD DY+ ALE+G+PP +G G+G+DR+
Sbjct: 424 GNGFSELNDAEDQAERFQDQVKAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGVGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 MMLFTNSHTIRDVILFPAMR 502
>gi|333984941|ref|YP_004514151.1| lysyl-tRNA synthetase [Methylomonas methanica MC09]
gi|333808982|gb|AEG01652.1| Lysyl-tRNA synthetase [Methylomonas methanica MC09]
Length = 498
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 228/451 (50%), Positives = 320/451 (70%), Gaps = 29/451 (6%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF LQD SG +IQ+Y++ + + + +Y + FK +DIGDI+GA+G LF
Sbjct: 68 MTRRIMGKASFCHLQDMSG-----QIQVYVARDNLPEGVYNEQFKKWDIGDIVGAEGVLF 122
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELS+K+ S++L+TK+LRPLP KF +++QEIKYR RY+DLI+++ RK F R++
Sbjct: 123 KTKTGELSVKLDSIRLLTKALRPLPEKFHGIADQEIKYRQRYLDLIMSDEARKTFLMRSK 182
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR F+ DF+EVETP++ PGGA A+PF T HN+L+M ++LRIAPELYLKRL++
Sbjct: 183 IVNYIRDFLTHRDFLEVETPMMQVIPGGATARPFTTFHNALDMDLYLRIAPELYLKRLVV 242
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEG+S RHNPEFTM+EFY AY Y LM TE M++ I D +G T
Sbjct: 243 GGFERVFEINRNFRNEGLSTRHNPEFTMLEFYQAYAEYGDLMDLTEAMLRGIAEDIVGRT 302
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
I+YQG DF K F ++T++E+I + P DLQ + K+
Sbjct: 303 IIEYQGEHYDFGKPFVRMTVLESILHFNPDLTLEDLQTRE-------------AAAKVAE 349
Query: 300 NLKKDI--------LQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFE 351
NLK + +Q+ +FE+T E +L NPT+IT YP E+SPLAR+ N ++ ++T+RFE
Sbjct: 350 NLKIPVKDSYGLGKIQIEIFEKTVEHRLMNPTFITAYPVEVSPLARR-NDDDPHVTDRFE 408
Query: 352 LFIIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASG 411
F+ G EIANGF+ELND E+Q+ RF+ Q+ K + E + ++D DYI ALE+GMPP +G
Sbjct: 409 FFVGGREIANGFTELNDAEDQAERFQKQVQEKEAGDNE-AMHFDADYITALEHGMPPTAG 467
Query: 412 CGIGVDRLIMLLTNSKNIRDVILFPHLRNEN 442
GIG+DRL+ML TN+ +IRDV+LFPH+R +N
Sbjct: 468 EGIGIDRLVMLFTNAPSIRDVLLFPHMRPKN 498
>gi|330828581|ref|YP_004391533.1| Lysyl-tRNA synthetase, heat inducible [Aeromonas veronii B565]
gi|406678213|ref|ZP_11085391.1| lysyl-tRNA synthetase [Aeromonas veronii AMC35]
gi|423200868|ref|ZP_17187448.1| lysyl-tRNA synthetase [Aeromonas veronii AER39]
gi|423207820|ref|ZP_17194376.1| lysyl-tRNA synthetase [Aeromonas veronii AMC34]
gi|423210734|ref|ZP_17197288.1| lysyl-tRNA synthetase [Aeromonas veronii AER397]
gi|328803717|gb|AEB48916.1| Lysyl-tRNA synthetase, heat inducible [Aeromonas veronii B565]
gi|404615119|gb|EKB12092.1| lysyl-tRNA synthetase [Aeromonas veronii AER397]
gi|404619439|gb|EKB16353.1| lysyl-tRNA synthetase [Aeromonas veronii AER39]
gi|404620887|gb|EKB17784.1| lysyl-tRNA synthetase [Aeromonas veronii AMC34]
gi|404622899|gb|EKB19755.1| lysyl-tRNA synthetase [Aeromonas veronii AMC35]
Length = 511
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 227/445 (51%), Positives = 319/445 (71%), Gaps = 18/445 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF LQD +G KIQ+Y++ + + + Y + FK +D+GDI+G +GTLF
Sbjct: 76 MTRRIMGKASFATLQDMAG-----KIQVYVTRDDLPEGFYNEQFKKWDLGDIVGVEGTLF 130
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELS+ VS ++L+TK+LRPLP K + L++QE + R RY+DLI NE +RK F RTQ
Sbjct: 131 KTQTGELSVHVSDIRLLTKALRPLPEKHKGLTDQEARCRQRYLDLIANEESRKTFMIRTQ 190
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR F + FMEVETP++ PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 191 VVAGIRKFFNEKRFMEVETPMMQVIPGGASARPFVTHHNALDIDMYLRIAPELYLKRLVV 250
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF +++EIN+NFRNEGIS RHNPEFTMIEFY AY +YI LM TE++++ + D +G T
Sbjct: 251 GGFERVYEINRNFRNEGISVRHNPEFTMIEFYMAYADYIDLMDLTEELLRTLAQDILGDT 310
Query: 240 KIDY-----QGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQ 294
KI Y +G +DF + F++LT++E+I K+ P DL K+ K+++ + +
Sbjct: 311 KIRYAKEGEEGLTIDFGQPFQRLTMVESILKFNPDVTLDDLATLESAKAVAKRLHIELMK 370
Query: 295 KKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFI 354
L ++ I FEET E L PT+IT YP +SPLAR++++ N ++T+RFE FI
Sbjct: 371 GWELGHVITAI-----FEETVEHMLLQPTFITEYPAAVSPLARRNDV-NPDVTDRFEFFI 424
Query: 355 IGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGI 414
G E+ANGFSELND E+Q+ RF++Q+D K E + + +YD D++ ALE+G+PP +G GI
Sbjct: 425 GGRELANGFSELNDAEDQAKRFQDQVDQK-EAGDDEAMFYDADFVTALEHGLPPTAGQGI 483
Query: 415 GVDRLIMLLTNSKNIRDVILFPHLR 439
G+DRL+ML TNS IRDVILFP LR
Sbjct: 484 GIDRLVMLFTNSHTIRDVILFPALR 508
>gi|253988707|ref|YP_003040063.1| lysyl-tRNA synthetase [Photorhabdus asymbiotica]
gi|211637968|emb|CAR66596.1| lysyl-trna synthetase (ec 6.1.1.6) (lysine--trna ligase) (lysrs)
[Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949]
gi|253780157|emb|CAQ83318.1| lysyl-tRNA synthetase [Photorhabdus asymbiotica]
Length = 504
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 226/442 (51%), Positives = 317/442 (71%), Gaps = 17/442 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD + G+IQLY++ + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 74 MTRRIMGKASFVTLQD-----AGGRIQLYVARDDLPEGIYNEQFKKWDLGDILGARGKLF 128
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L++QE +YR RY+DLI NE +RK F+ R+Q
Sbjct: 129 KTKTGELSIHCTELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANEESRKTFQIRSQ 188
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
++S +R+F+ FMEVETP++ PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 189 VLSVMRNFIISKGFMEVETPMMQVIPGGAAARPFVTHHNALDIDMYLRIAPELYLKRLVV 248
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEG+SPRHNPEFTM+E Y AY +Y L+ E++ + + + +G T
Sbjct: 249 GGFERVFEINRNFRNEGVSPRHNPEFTMLELYMAYADYKDLIVLIEELFRTLAQNVLGDT 308
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQ--NKLFLKSELKKINPKFNQKKI 297
++ Y + DF K F ++++ EAI KY P+ N DL +K +E I+ +
Sbjct: 309 RVKYGEQEFDFGKPFAQMSMKEAICKYRPETNMADLDDMDKAVAIAESLGID-------V 361
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
+Q +FEET E++L PT+IT YP E+SPLAR++N +N IT+RFE FI G
Sbjct: 362 EKGWGLGRVQCEIFEETAESRLIQPTFITEYPAEVSPLARRNN-DNPFITDRFEFFIGGR 420
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND E+Q+ RF Q+ K+E + E + +YD DYI ALE+GMPP +G GIG+D
Sbjct: 421 EIGNGFSELNDAEDQAERFAEQVRQKDEGDDE-AMFYDEDYITALEHGMPPTAGLGIGID 479
Query: 418 RLIMLLTNSKNIRDVILFPHLR 439
R++ML TNS IRDVILFP +R
Sbjct: 480 RMVMLFTNSHTIRDVILFPAMR 501
>gi|290476398|ref|YP_003469303.1| lysine tRNA synthetase [Xenorhabdus bovienii SS-2004]
gi|289175736|emb|CBJ82539.1| lysine tRNA synthetase, constitutive [Xenorhabdus bovienii SS-2004]
Length = 504
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 227/440 (51%), Positives = 316/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF LQD G +IQ+Y+S + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 74 MTRRIMGKASFATLQDMGG-----RIQVYVSRDDLPEGIYNEQFKKWDLGDILGARGKLF 128
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L++QE++YR RY+DLI N+ +RK F+ R++
Sbjct: 129 KTKTGELSIHCTELRLLTKALRPLPDKFHGLADQEMRYRQRYLDLISNDESRKTFQIRSR 188
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++++R+FM K DFMEVETP++ PGGA A+PF THHN+L++ M+LRIAPELYLKRL++
Sbjct: 189 IMAALRNFMVKKDFMEVETPMMQAIPGGASARPFTTHHNALDIDMYLRIAPELYLKRLVV 248
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGISPRHNPEFTM+E Y AY +Y L+ TE++ + + + +GTT
Sbjct: 249 GGFERVFEINRNFRNEGISPRHNPEFTMMELYMAYADYQDLIVLTEELFRTLTQEVLGTT 308
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y + DF K F K+++ EAI KY P+ N DL + + K + + L
Sbjct: 309 LVKYGEQEFDFGKPFTKMSMKEAICKYRPETNIADLDDMDKAVAIAKSLGIDIEKSWGLG 368
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+Q +FEET E+ L PT+IT YP E+SPLAR+ N +N IT+RFE FI G EI
Sbjct: 369 R-----IQCEIFEETAESHLIQPTFITEYPAEVSPLARR-NDDNPFITDRFEFFIGGREI 422
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF Q+ K+E + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 423 GNGFSELNDAEDQAERFAEQVRHKDEGDDE-AMFYDDDYVTALEHGLPPTAGLGIGIDRM 481
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML T+S IRDVILFP +R
Sbjct: 482 VMLFTDSHTIRDVILFPAMR 501
>gi|269140267|ref|YP_003296968.1| lysyl-tRNA synthetase [Edwardsiella tarda EIB202]
gi|387868782|ref|YP_005700251.1| Lysyl-tRNA synthetase class II [Edwardsiella tarda FL6-60]
gi|267985928|gb|ACY85757.1| lysyl-tRNA synthetase [Edwardsiella tarda EIB202]
gi|304560095|gb|ADM42759.1| Lysyl-tRNA synthetase class II [Edwardsiella tarda FL6-60]
Length = 505
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 225/440 (51%), Positives = 315/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G+IQLY++ + + ++Y++ FK +D+GDIIGA+GTLF
Sbjct: 75 MTRRIMGKASFVTLQDM-----GGRIQLYVARDDLKDDVYSEQFKKWDLGDIIGARGTLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
+T TGELSI S+ L+TK+LRPLP+KF LS+QE +YR RY+DLI NE++R+ F+ R++
Sbjct: 130 RTQTGELSIHCHSIHLLTKALRPLPDKFHGLSDQETRYRQRYLDLIANESSRETFRTRSK 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+++IR+FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAAIRNFMVNKGFMEVETPMMQVIPGGASARPFITHHNALDIDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEG+SPRHNPEFTM+E Y AY +Y L+ TE++ + I D +G++
Sbjct: 250 GGFERVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYKDLIVLTEELFRTISQDVLGSS 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y + DF K F K+++ EAI Y P DL + + + K + L
Sbjct: 310 VVQYGDQTFDFGKPFIKMSMKEAICHYRPDIASADLDDMEKACKIAESLGIKIEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+Q +F+ET E++L PT+IT YP E+SPLAR+ N EN IT+RFE FI G EI
Sbjct: 370 R-----VQCEIFDETAESQLIQPTFITEYPAEVSPLARR-NDENPFITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF +Q+ K+ + E + +YD DY+ ALE+G+PP +G G+G+DR+
Sbjct: 424 GNGFSELNDAEDQAERFLDQVKAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGVGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 MMLFTNSHTIRDVILFPAMR 502
>gi|53802401|ref|YP_112835.1| lysyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
gi|53756162|gb|AAU90453.1| lysyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
Length = 496
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 220/442 (49%), Positives = 313/442 (70%), Gaps = 12/442 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M KR+MGK SF +QD SG +IQ+++ + + + +Y +FK++DIGD+IG +GT+F+
Sbjct: 67 MGKRIMGKASFAHIQDMSG-----RIQIFLQRDGLAEGVYEEFKSWDIGDVIGVEGTVFR 121
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+K S+++L+TKSLRPLP KF L++ E +YR RY+DL++NE +R+VF+ R+ I
Sbjct: 122 TKTGELSVKASNIRLLTKSLRPLPEKFHGLTDAETRYRQRYLDLLMNEESRRVFQLRSAI 181
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+ IR F+ + F+E ETP++ PGGA AKPF+THHN+L + ++LRIAPELYLKRL++G
Sbjct: 182 VRYIRDFLSERGFIEAETPMMQVIPGGARAKPFVTHHNALGLDLYLRIAPELYLKRLVVG 241
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF K+FEIN++FRNEG+S RHNPEFTMIEFY AY +Y LM TE +++ I + +G T
Sbjct: 242 GFEKVFEINRSFRNEGLSTRHNPEFTMIEFYQAYADYRDLMDLTETLMRGIAQNLLGGTV 301
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ +QG+ D + F ++T++E+I Y P DL + + + L
Sbjct: 302 VTHQGKDYDLGRPFRRMTVLESIIHYNPDIRAEDLAERESAAAIAAGLGIPVAAGDGLGK 361
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
++ +I FE+T E +L PT+IT YP E+SPLAR+ N EN IT+RFE F+ G E+A
Sbjct: 362 IQTEI-----FEKTVEDRLDEPTFITAYPAEVSPLARR-NDENPFITDRFEFFVGGRELA 415
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF+ Q++ K E + +YD DYI ALEYG+PP +G GIG+DRL+
Sbjct: 416 NGFSELNDPEDQAERFRKQVEDKA-AGDEEAMHYDADYIRALEYGLPPTAGEGIGIDRLV 474
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
M T+S +IRDVILFPH+R E+
Sbjct: 475 MFFTDSPSIRDVILFPHMRPES 496
>gi|117617708|ref|YP_857858.1| lysyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
gi|166229790|sp|A0KNK7.1|SYK_AERHH RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|117559115|gb|ABK36063.1| lysyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
Length = 511
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 226/445 (50%), Positives = 317/445 (71%), Gaps = 18/445 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF LQD +G KIQ+Y++ + + + Y + FK +D+GDI+G +GTLF
Sbjct: 76 MTRRIMGKASFATLQDMAG-----KIQVYVTRDDLPEGFYNEQFKKWDLGDIVGVEGTLF 130
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
+TNTGELS+ VS ++L+TK+LRPLP K + L++QE + R RY+DLI NE +RK F RT+
Sbjct: 131 RTNTGELSVHVSDIRLLTKALRPLPEKHKGLTDQEARCRQRYLDLIANEESRKTFVTRTK 190
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR F+ FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 191 VVAGIRKFLNDKRFMEVETPMMQVIPGGASARPFITHHNALDIDMYLRIAPELYLKRLVV 250
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF +++EIN+NFRNEGIS RHNPEFTM+EFY AY +YI LM TE+M++ + D +G T
Sbjct: 251 GGFERVYEINRNFRNEGISVRHNPEFTMLEFYMAYADYIDLMDLTEEMLRTLAQDILGDT 310
Query: 240 KIDY-----QGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQ 294
KI Y +G +DF + F++L+++++I KY P DL + K+++ + +
Sbjct: 311 KIRYAKEGEEGLTIDFGQPFQRLSMVDSILKYNPDVTRDDLATLEKATAVAKRLHIELMK 370
Query: 295 KKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFI 354
L ++ I FEET E L PT+IT YP +SPLAR+ N +N ++T+RFE FI
Sbjct: 371 SWELGHVITAI-----FEETVEHMLLQPTFITEYPAAVSPLARR-NDQNPDVTDRFEFFI 424
Query: 355 IGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGI 414
G E+ANGFSELND E+Q+ RF+ Q+D K + E + +YD D++ ALE+G+PP +G GI
Sbjct: 425 GGRELANGFSELNDAEDQAERFQAQVDQKAAGDDE-AMFYDADFVTALEHGLPPTAGQGI 483
Query: 415 GVDRLIMLLTNSKNIRDVILFPHLR 439
G+DRL+ML TNS IRDVILFP LR
Sbjct: 484 GIDRLVMLFTNSHTIRDVILFPALR 508
>gi|411008188|ref|ZP_11384517.1| lysyl-tRNA ligase [Aeromonas aquariorum AAK1]
gi|423195483|ref|ZP_17182066.1| lysyl-tRNA synthetase [Aeromonas hydrophila SSU]
gi|404633258|gb|EKB29807.1| lysyl-tRNA synthetase [Aeromonas hydrophila SSU]
Length = 511
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 226/445 (50%), Positives = 317/445 (71%), Gaps = 18/445 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF LQD +G KIQ+Y++ + + + Y + FK +D+GDI+G +GTLF
Sbjct: 76 MTRRIMGKASFATLQDMAG-----KIQVYVTRDDLPEGFYNEQFKKWDLGDIVGVEGTLF 130
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
+TNTGELS+ VS ++L+TK+LRPLP K + L++QE + R RY+DLI NE +RK F RT+
Sbjct: 131 RTNTGELSVHVSDIRLLTKALRPLPEKHKGLTDQEARCRQRYLDLIANEESRKTFVTRTK 190
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR F+ FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 191 VVAGIRKFLNDKRFMEVETPMMQVIPGGASARPFITHHNALDIDMYLRIAPELYLKRLVV 250
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF +++EIN+NFRNEGIS RHNPEFTM+EFY AY +YI LM TE+M++ + D +G T
Sbjct: 251 GGFERVYEINRNFRNEGISVRHNPEFTMLEFYMAYADYIDLMDLTEEMLRTLAQDILGDT 310
Query: 240 KIDY-----QGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQ 294
KI Y +G +DF + F++L+++++I KY P DL + K+++ + +
Sbjct: 311 KIRYAKEGEEGLTIDFGQPFQRLSMVDSILKYNPDVTRDDLATLEKATAVAKRLHIELMK 370
Query: 295 KKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFI 354
L ++ I FEET E L PT+IT YP +SPLAR+ N +N ++T+RFE FI
Sbjct: 371 SWELGHVITAI-----FEETVEHMLLQPTFITEYPAAVSPLARR-NDQNPDVTDRFEFFI 424
Query: 355 IGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGI 414
G E+ANGFSELND E+Q+ RF+ Q+D K + E + +YD D++ ALE+G+PP +G GI
Sbjct: 425 GGRELANGFSELNDAEDQAERFQAQVDQKAAGDDE-AMFYDADFVTALEHGLPPTAGQGI 483
Query: 415 GVDRLIMLLTNSKNIRDVILFPHLR 439
G+DRL+ML TNS IRDVILFP LR
Sbjct: 484 GIDRLVMLFTNSHTIRDVILFPALR 508
>gi|88812906|ref|ZP_01128150.1| lysyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
gi|88789828|gb|EAR20951.1| lysyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
Length = 506
Score = 473 bits (1217), Expect = e-131, Method: Compositional matrix adjust.
Identities = 222/441 (50%), Positives = 314/441 (71%), Gaps = 20/441 (4%)
Query: 3 KRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
KRVMGK SF LQD SG +IQL++ + + +Y FK++D+GDIIGA+G ++KT
Sbjct: 76 KRVMGKASFAHLQDMSG-----RIQLFLRRDDLSSEVYQQFKSWDVGDIIGAEGHVYKTQ 130
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
GELS++VS+++L+TKSLRPLP K+ L++QE +YR RY+DLI+NEN R+ F R +II
Sbjct: 131 AGELSVRVSAIRLLTKSLRPLPEKYHGLADQEARYRQRYVDLIVNENARRTFILRGRIIQ 190
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
SIR + F+EVETP++ PGGA A+PFITHHN+L++ ++LRIAPELYLKRL++GGF
Sbjct: 191 SIRAAFNEWGFLEVETPMMQPIPGGAAARPFITHHNALDVDLYLRIAPELYLKRLVVGGF 250
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
K++EIN+NFRNEG+S RHNPEFTM+EFY AY +Y LM TE++++++ + +GT ++
Sbjct: 251 EKVYEINRNFRNEGVSTRHNPEFTMLEFYQAYADYHDLMDLTEELLRRLAAEVLGTQRLH 310
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLF---LKSELK-KINPKFNQKKIL 298
YQG +D + F + T+ AI ++ PQ + L ++ L +L + P + K
Sbjct: 311 YQGEAIDLHRPFARRTVRAAILEHNPQLSAAQLDDREAAGGLAQQLDIDVQPHWGLGK-- 368
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQL +FE+TTE +L PT++T YP E+SPLAR + E+ +TERFEL I G E
Sbjct: 369 -------LQLEIFEKTTEHRLRQPTFVTEYPREVSPLARPKD-EDPFVTERFELIIGGRE 420
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IANGFSELND ++Q+ RF+ Q+ K E E + +YD D+I ALEYG+PP +G GIG+DR
Sbjct: 421 IANGFSELNDADDQAERFRAQVAGK-EAGDEEAMFYDADFIRALEYGLPPTAGEGIGIDR 479
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+ML T++ +IRDV+LFP +R
Sbjct: 480 LVMLFTDAPSIRDVLLFPAMR 500
>gi|344199098|ref|YP_004783424.1| Lysyl-tRNA synthetase [Acidithiobacillus ferrivorans SS3]
gi|343774542|gb|AEM47098.1| Lysyl-tRNA synthetase [Acidithiobacillus ferrivorans SS3]
Length = 496
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 214/446 (47%), Positives = 309/446 (69%), Gaps = 20/446 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M +RVMGK SF +QD SG +IQL++S + +G+ Y FK D GDIIG G LF+
Sbjct: 66 MSRRVMGKASFADIQDQSG-----RIQLFVSRDNLGEEAYARFKGLDFGDIIGVDGVLFR 120
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+KV L+L++K+LRPLP K+ L++ E ++R RY+DLI+ E TR+ F+ R +
Sbjct: 121 TKTGELSVKVHKLQLLSKALRPLPEKWHGLADPETRFRQRYVDLIVTEATRRTFQIRAET 180
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
++++R + + F E ETP++ PGGA A+PF+THH++L+M ++LRIAPELYLKRL++G
Sbjct: 181 VAALRDGLRQRGFYEAETPMMQPIPGGATARPFVTHHHALDMTLYLRIAPELYLKRLVVG 240
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN+NFRNEGIS RHNPEFTM+E+Y AY +++ M TE +I+ +GTT
Sbjct: 241 GIEQVFEINRNFRNEGISTRHNPEFTMLEWYEAYADHVRAMDLTETLIRAAAQASLGTTA 300
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKI----NPKFNQKK 296
I+YQG +D K F +LT+ E+++ + P + DL++ L ++L ++ P + K
Sbjct: 301 INYQGLEIDLGKPFHRLTVTESVRAHNPDLADADLRDPAVLAAKLAQLQLPCQPAWGWGK 360
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L + +FE+T E L PT+IT YP E+SPLAR++++ + +T+RFEL I G
Sbjct: 361 RL---------IEIFEKTVEGHLQQPTFITEYPLEVSPLARRNDL-DPEVTDRFELMIAG 410
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELNDPE+Q+ RF+ Q+ K+ E + +D DYI ALEYGMPP +G G+G+
Sbjct: 411 RELANGFSELNDPEDQAARFRAQVAAKD-AGDEEAMCFDADYIRALEYGMPPTAGVGLGI 469
Query: 417 DRLIMLLTNSKNIRDVILFPHLRNEN 442
DRL+MLL + +IR+VILFPHLR E
Sbjct: 470 DRLVMLLADQPSIREVILFPHLRPEQ 495
>gi|344940446|ref|ZP_08779734.1| Lysyl-tRNA synthetase [Methylobacter tundripaludum SV96]
gi|344261638|gb|EGW21909.1| Lysyl-tRNA synthetase [Methylobacter tundripaludum SV96]
Length = 499
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 217/440 (49%), Positives = 318/440 (72%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +RVMGK SF +QD SG +IQLY++ + + ++ Y + FK +DIGDI+GA+G LF
Sbjct: 69 MTRRVMGKASFCHIQDMSG-----QIQLYVTRDALPESFYNEQFKKWDIGDIVGAEGVLF 123
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELS+K+ ++L+TK+LRPLP KF +++QEIKYR RY+DLI++E +R F R++
Sbjct: 124 KTQTGELSVKIDDIRLLTKALRPLPEKFHGIADQEIKYRQRYLDLIMSEQSRNTFLIRSK 183
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR F+ + DF+EVETP++ PGGA A+PF T HN+L+M+++LRIAPELYLKRL++
Sbjct: 184 VVAYIRQFLIERDFLEVETPMMQMIPGGATARPFTTFHNALDMELYLRIAPELYLKRLVV 243
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEG+S RHNPEFTM+EFY AY Y LM TE M++ + ++ +G T
Sbjct: 244 GGFERVFEINRNFRNEGLSTRHNPEFTMLEFYQAYAEYHDLMDLTEAMLRGVAVEVLGQT 303
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+I YQG DF K F+++T+ ++I + P ++ + K ++ L
Sbjct: 304 EITYQGEQYDFGKPFDRMTVFDSILHFNPDLTAENIATREAAVEVAKNLHIPVKDGYGLG 363
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+Q+ +FE+T E++L NPT+IT YP E+SPLAR+ N +N ++T+RFE F+ G EI
Sbjct: 364 K-----IQIEIFEKTVESRLMNPTFITAYPVEVSPLARR-NDDNPHVTDRFEFFVGGREI 417
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
ANGF+ELND E+Q+ RF+ Q++ K E + + ++D DYI ALE+GMPP +G GIG+DRL
Sbjct: 418 ANGFTELNDAEDQAARFQKQVEEK-EAGDDEAMHFDADYIVALEHGMPPTAGEGIGIDRL 476
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML ++ +IRDV+LFPH+R
Sbjct: 477 VMLFADAPSIRDVLLFPHMR 496
>gi|119947031|ref|YP_944711.1| lysyl-tRNA synthetase [Psychromonas ingrahamii 37]
gi|259511530|sp|A1T047.1|SYK_PSYIN RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|119865635|gb|ABM05112.1| lysyl-tRNA synthetase [Psychromonas ingrahamii 37]
Length = 509
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 227/440 (51%), Positives = 323/440 (73%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLY-TDFKNYDIGDIIGAKGTLF 59
M++R+MGK SF +QD G +IQLY++ + + ++ Y T+FK +D+GDIIGAKG LF
Sbjct: 78 MMRRIMGKASFATIQDMGG-----RIQLYVTRDKLPESFYNTEFKKWDLGDIIGAKGVLF 132
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T ELSIKVS ++++TK+LRPLP+KF LS+ E YR RY+DLI N+N+RK F R +
Sbjct: 133 KTQTNELSIKVSEIRILTKALRPLPDKFHGLSDTEACYRQRYLDLIANDNSRKTFLLRNK 192
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+++IR ++ DFMEVETP+L + PGGA AKPF T+HN+L++ M+LRIAPEL LKRL++
Sbjct: 193 IVNAIRQYLNDRDFMEVETPMLQSIPGGAAAKPFETYHNALSLPMYLRIAPELNLKRLVV 252
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN++FRNEG+S RHNPEFTMIEFY AY +YI LM TE+M++ I + +G++
Sbjct: 253 GGFERVFEINRSFRNEGVSTRHNPEFTMIEFYQAYADYIDLMNLTEEMLRSIAENVLGSS 312
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++Y ++ DF +F ++T+ E++ QYNE ++L + LK + +FN I
Sbjct: 313 IVNYGDQVFDFGAAFIRMTMKESVL----QYNEGIEASELESMASLKALAARFN-VNIKE 367
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
N + + +FEETTE KL PT+IT YP E+SPLAR+ N ++ ++T+RFE F+ G E+
Sbjct: 368 NWGEGKVLTEIFEETTEHKLLQPTFITAYPAEVSPLARR-NDQDPSVTDRFEFFVGGREL 426
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
ANGFSELND ++Q+ RF +Q+ K + E + +YD DYI ALE+G+PP +G GIG+DRL
Sbjct: 427 ANGFSELNDSQDQAERFMDQVAQKESGDDE-AMFYDADYITALEHGLPPTAGEGIGIDRL 485
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML T+S IRDV+LFPH+R
Sbjct: 486 VMLFTDSHTIRDVLLFPHMR 505
>gi|255020529|ref|ZP_05292593.1| Lysyl-tRNA synthetase (class II) [Acidithiobacillus caldus ATCC
51756]
gi|254970049|gb|EET27547.1| Lysyl-tRNA synthetase (class II) [Acidithiobacillus caldus ATCC
51756]
Length = 495
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 213/442 (48%), Positives = 310/442 (70%), Gaps = 12/442 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M +R+MGK SF LQD SG ++QL+ S + +G++ Y FK D+GD+IG G LF+
Sbjct: 65 MSRRIMGKASFADLQDGSG-----RLQLFFSRDELGEDAYAQFKELDLGDVIGVGGQLFR 119
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS++V+S L+ K+LRPLP K+ LS+ E ++R RY+DLI+ E+TR+ F+ R+Q
Sbjct: 120 TKTGELSLRVASFTLLAKALRPLPEKWHGLSDPETRFRQRYVDLIVTESTRRTFRIRSQT 179
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
++++R + + F+EVETP++ PGGA A+PFITHH++L+M ++LRIAPELYLKRL++G
Sbjct: 180 VAALRAVLSNDGFIEVETPMMQPIPGGATARPFITHHHALDMTLYLRIAPELYLKRLVVG 239
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+S RHNPEFTM+E+Y AY +Y M E +I+ +G+T
Sbjct: 240 GFERVFEINRNFRNEGVSTRHNPEFTMLEWYEAYADYTMAMDRCETLIRAAAQAALGSTD 299
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQG + + F +L + EA+++Y P +L++ L +L+++ +
Sbjct: 300 IHYQGLAIHLGEPFARLGVAEAVRRYHPDLAHKNLRDAGILGDKLRELG---HPCPADWG 356
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
K +++ LFE+T E +L PT+IT YP E+SPLAR+ + + +T+RFELFI G E+A
Sbjct: 357 WGKRLVE--LFEKTVEPRLEQPTFITEYPLEVSPLARRCSA-DPELTDRFELFIAGRELA 413
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDP++Q+ RF+ Q+ K E E + ++D DYI ALEYGMPP +G G+GVDRL+
Sbjct: 414 NGFSELNDPDDQAARFRAQVAAK-EAGDEEAMFFDADYIRALEYGMPPTAGVGLGVDRLV 472
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLL + +IR+VILFPHLR E
Sbjct: 473 MLLADQPSIREVILFPHLRPEQ 494
>gi|37527421|ref|NP_930765.1| lysyl-tRNA synthetase [Photorhabdus luminescens subsp. laumondii
TTO1]
gi|39932032|sp|Q7N1C8.1|SYK_PHOLL RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|36786856|emb|CAE15921.1| Lysyl-tRNA synthetase (Lysine--tRNA ligase) [Photorhabdus
luminescens subsp. laumondii TTO1]
Length = 504
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 226/440 (51%), Positives = 314/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y + FK +D+GDI+GA+G LF
Sbjct: 74 MTRRIMGKASFVTLQDMGG-----RIQLYVARDDLPEGIYNEQFKKWDLGDILGARGKLF 128
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L++QE +YR RY+DLI NE +RK F+ R+Q
Sbjct: 129 KTKTGELSIHCTELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANEESRKTFQIRSQ 188
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
++ ++R FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 189 VLLALRSFMVSKGFMEVETPMMQVIPGGAAARPFITHHNALDIDMYLRIAPELYLKRLVV 248
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEG+SPRHNPEFTM+E Y AY +Y L+ E++ + + + +G T
Sbjct: 249 GGFERVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYKDLIVLIEELFRTLTQNILGNT 308
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y + DF K F ++T+ EAI KY P+ N DL + + + + + + + L
Sbjct: 309 LVKYGEQEFDFGKPFAQMTMKEAICKYRPETNIADLDDMDKVVAIAESLGIEVEKGWGLG 368
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
++ +I FEET E+ L PT+IT YP E+SPLAR+ N N IT+RFE FI G EI
Sbjct: 369 RVQCEI-----FEETAESHLIQPTFITEYPAEVSPLARR-NDANPFITDRFEFFIGGREI 422
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF Q+ K+E + E + +YD DY+ ALE+GMPP +G GIG+DR+
Sbjct: 423 GNGFSELNDAEDQAERFAEQVRQKDEGDDE-AMFYDEDYVTALEHGMPPTAGLGIGIDRM 481
Query: 420 IMLLTNSKNIRDVILFPHLR 439
IMLLT+S IRDVILFP +R
Sbjct: 482 IMLLTDSHTIRDVILFPAMR 501
>gi|421496466|ref|ZP_15943694.1| Lysine--tRNA ligase [Aeromonas media WS]
gi|407184454|gb|EKE58283.1| Lysine--tRNA ligase [Aeromonas media WS]
Length = 512
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 224/445 (50%), Positives = 319/445 (71%), Gaps = 18/445 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF LQD +G KIQ+Y++ + + + Y + FK +D+GDI+G +GTLF
Sbjct: 76 MTRRIMGKASFATLQDMAG-----KIQIYVTRDDLPEGFYNEQFKKWDLGDIVGVEGTLF 130
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
+TNTGELS+ V ++L+TK+LRPLP K + L++QE + R RY+DLI NE +RK F RTQ
Sbjct: 131 RTNTGELSVHVGEIRLLTKALRPLPEKHKGLTDQEARCRQRYLDLIANEESRKTFMIRTQ 190
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR F + FMEVETP++ PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 191 VVAGIRKFFNEKRFMEVETPMMQVIPGGASARPFVTHHNALDIDMYLRIAPELYLKRLVV 250
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF +++EIN+NFRNEGIS RHNPEFTMIEFY AY +YI LM TE++++ + D +G T
Sbjct: 251 GGFERVYEINRNFRNEGISVRHNPEFTMIEFYMAYADYIDLMDLTEELLRTLAQDILGDT 310
Query: 240 KIDY-----QGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQ 294
KI Y +G +DF + F++LT++E+I K+ P + DL + K+++ + +
Sbjct: 311 KIRYAKEGEEGLTIDFGQPFQRLTMVESILKFNPDVTKDDLATLESATAVAKRLHIELMK 370
Query: 295 KKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFI 354
L ++ I FEET E L PT+IT YP +SPLAR++++ N ++T+RFE FI
Sbjct: 371 GWELGHVITAI-----FEETVEHMLLQPTFITEYPAAVSPLARRNDV-NPDVTDRFEFFI 424
Query: 355 IGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGI 414
G E+ANGFSELND E+Q+ RF++Q++ K E + + +YD D++ ALE+G+PP +G GI
Sbjct: 425 GGRELANGFSELNDAEDQAKRFQDQVNQK-EAGDDEAMFYDADFVTALEHGLPPTAGQGI 483
Query: 415 GVDRLIMLLTNSKNIRDVILFPHLR 439
G+DRL+ML TNS IRDVILFP LR
Sbjct: 484 GIDRLVMLFTNSHTIRDVILFPALR 508
>gi|425071704|ref|ZP_18474810.1| lysyl-tRNA synthetase [Proteus mirabilis WGLW4]
gi|404598562|gb|EKA99032.1| lysyl-tRNA synthetase [Proteus mirabilis WGLW4]
Length = 504
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 228/440 (51%), Positives = 311/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF LQD G +IQLY+S + + + +Y + FK +D+GDI+G +G +F
Sbjct: 74 MTRRIMGKASFATLQDMGG-----RIQLYVSRDDLPEGVYNEQFKKWDLGDILGGRGRVF 128
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L++QE +YR RY+DLI NEN+R FK R++
Sbjct: 129 KTKTGELSIHCTELRLLTKALRPLPDKFHGLADQETRYRQRYLDLISNENSRNTFKIRSK 188
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+S+IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 189 IMSAIRQFMVNKGFMEVETPMMQTIPGGASARPFITHHNALDIDMYLRIAPELYLKRLVV 248
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF+++FEIN+NFRNEG+SPRHNPEFTM+E Y AY +Y L++ TE++ + + +G+T
Sbjct: 249 GGFDRVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYRDLIELTEELFRTLTQYVLGST 308
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y DF K FEKLT+ EAI KY P+ N DL + + + I K + L
Sbjct: 309 IVKYGDEEFDFGKPFEKLTMKEAICKYRPETNMADLDDMDKAVAIAQSIGIKIEKSWGLG 368
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+Q +FEE E+ L PT+I YP E+SPLAR+ N +N IT+RFE FI G EI
Sbjct: 369 R-----VQCEIFEEVAESHLIQPTFIIEYPAEVSPLARR-NDDNPFITDRFEFFIGGREI 422
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND ++Q+ RF+ Q+ K E + + ++D DYI ALE+G+PP +G GIG+DR+
Sbjct: 423 GNGFSELNDAQDQAERFEEQVRQK-EAGDDEAMFFDHDYITALEHGLPPTAGLGIGIDRM 481
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 482 VMLFTNSHTIRDVILFPAMR 501
>gi|384427752|ref|YP_005637111.1| lysyl-tRNA synthetase [Xanthomonas campestris pv. raphani 756C]
gi|341936854|gb|AEL06993.1| lysyl-tRNA synthetase [Xanthomonas campestris pv. raphani 756C]
Length = 505
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 217/445 (48%), Positives = 310/445 (69%), Gaps = 21/445 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M KRVMGK SF +QD SG ++QL++ ++G + YT FK +D+GDI+ +G L +
Sbjct: 77 MAKRVMGKASFAQIQDESG-----RVQLFLQGNVLG-DAYTAFKGWDVGDIVAVEGGLTR 130
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+K S+L+L+TKSLRPLP+K+ LS+ E +YR RY+DLI+ R+VF KR++I
Sbjct: 131 TKTGELSVKASALRLLTKSLRPLPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFIKRSKI 190
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I +IR +++ F+EVETP++H PGGA AKPF THHN+L++ ++LR+APELYLKRL++G
Sbjct: 191 IRAIRAWLDARRFLEVETPMMHYIPGGATAKPFTTHHNALDLDLYLRVAPELYLKRLVVG 250
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G +++EIN+NFRNEG+S RHNPEFTM+E Y AY Y +M TE++I+ +GTT+
Sbjct: 251 GLERVYEINRNFRNEGVSTRHNPEFTMLELYEAYATYHEIMDLTEQVIRDTAQSVLGTTQ 310
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELK----KINPKFNQKK 296
+ + G +D + +F + + EA++ + P+ + D ++ L + K+ P + K
Sbjct: 311 VSWDGADIDLAPAFRRWRMDEAVRHHNPEISAADCTDRAALLRHCERLKIKVKPSYGWGK 370
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
+L L +FE T E L PT+IT++P E+SPLAR S+ E T+RFELFI G
Sbjct: 371 LL---------LEIFEATVEHTLVQPTFITDHPVEVSPLARASDTE-PGYTDRFELFING 420
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELNDPE+Q+ RF+ Q+ K+ + E + +YD DYI ALEYGM P G GIG+
Sbjct: 421 KELANGFSELNDPEDQAARFQAQVQAKDGGDDE-AMHYDADYIRALEYGMAPTGGLGIGI 479
Query: 417 DRLIMLLTNSKNIRDVILFPHLRNE 441
DRL+MLLT S +IRDV+LFP++R E
Sbjct: 480 DRLVMLLTGSTSIRDVLLFPYMRPE 504
>gi|340781059|ref|YP_004747666.1| Lysyl-tRNA synthetase (class II) [Acidithiobacillus caldus SM-1]
gi|340555212|gb|AEK56966.1| Lysyl-tRNA synthetase (class II) [Acidithiobacillus caldus SM-1]
Length = 495
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 213/442 (48%), Positives = 309/442 (69%), Gaps = 12/442 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M +R+MGK SF LQD SG ++QL+ S + +G++ Y FK D+GD+IG G LF+
Sbjct: 65 MSRRIMGKASFADLQDGSG-----RLQLFFSRDELGEDAYAQFKELDLGDVIGVGGQLFR 119
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS++V+S L+ K+LRPLP K+ LS+ E ++R RY+DLI+ E+TR+ F+ R+Q
Sbjct: 120 TRTGELSLRVASFTLLAKALRPLPEKWHGLSDPETRFRQRYVDLIVTESTRRTFRIRSQT 179
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
++++R + + F+EVETP++ PGGA A+PFITHH++L+M ++LRIAPELYLKRL++G
Sbjct: 180 VAALRTVLSNDGFIEVETPMMQPIPGGATARPFITHHHALDMTLYLRIAPELYLKRLVVG 239
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+S RHNPEFTM+E+Y Y +Y M E +I+ +G+T
Sbjct: 240 GFERVFEINRNFRNEGVSTRHNPEFTMLEWYETYADYTMAMDRCETLIRAAAQAALGSTD 299
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQG + + F +L + EA+++Y P DL++ L +L+++ +
Sbjct: 300 IHYQGLAIHLGEPFARLGVAEAVRRYHPDLAHKDLRDAGVLGDKLRELG---HPCPADWG 356
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
K +++ LFE+T E +L PT+IT YP E+SPLAR+ + + +T+RFELFI G E+A
Sbjct: 357 WGKRLVE--LFEKTVEPRLEQPTFITEYPLEVSPLARRCSA-DPELTDRFELFIAGRELA 413
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDP++Q+ RF+ Q+ K E E + ++D DYI ALEYGMPP +G G+GVDRL+
Sbjct: 414 NGFSELNDPDDQAARFRAQVAAK-EAGDEEAMFFDADYIRALEYGMPPTAGVGLGVDRLV 472
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLL + +IR+VILFPHLR E
Sbjct: 473 MLLADQPSIREVILFPHLRPEQ 494
>gi|188991535|ref|YP_001903545.1| lysyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
B100]
gi|229559863|sp|B0RSQ8.1|SYK_XANCB RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|167733295|emb|CAP51494.1| lysyl-tRNA synthetase heat inducible [Xanthomonas campestris pv.
campestris]
Length = 505
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 217/445 (48%), Positives = 310/445 (69%), Gaps = 21/445 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M KRVMGK SF +QD SG ++QL++ ++G + YT FK +D+GDI+ +G L +
Sbjct: 77 MAKRVMGKASFAQIQDESG-----RVQLFLQGNVLG-DAYTAFKGWDVGDIVAVEGGLTR 130
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+K S+L+L+TKSLRPLP+K+ LS+ E +YR RY+DLI+ R+VF KR++I
Sbjct: 131 TKTGELSVKASALRLLTKSLRPLPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFIKRSKI 190
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I +IR +++ F+EVETP++H PGGA AKPF THHN+L++ ++LR+APELYLKRL++G
Sbjct: 191 IRAIRAWLDARRFLEVETPMMHYIPGGATAKPFTTHHNALDLDLYLRVAPELYLKRLVVG 250
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G +++EIN+NFRNEG+S RHNPEFTM+E Y AY Y +M TE++I+ +GTT+
Sbjct: 251 GLERVYEINRNFRNEGVSTRHNPEFTMLELYEAYATYHEIMDLTEQVIRDTAQGVLGTTQ 310
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELK----KINPKFNQKK 296
+ + G +D + +F + + EA++ + P+ + D ++ L + K+ P + K
Sbjct: 311 VSWDGADIDLAPAFRRWRMDEAVRHHNPEISAADCTDRAALLRHCERLKIKVKPSYGWGK 370
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
+L L +FE T E L PT+IT++P E+SPLAR S+ E T+RFELFI G
Sbjct: 371 LL---------LEIFEATVEHTLVQPTFITDHPVEVSPLARASDTE-PGYTDRFELFING 420
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELNDPE+Q+ RF+ Q+ K+ + E + +YD DYI ALEYGM P G GIG+
Sbjct: 421 KELANGFSELNDPEDQAARFQAQVQAKDGGDDE-AMHYDADYIRALEYGMAPTGGLGIGI 479
Query: 417 DRLIMLLTNSKNIRDVILFPHLRNE 441
DRL+MLLT S +IRDV+LFP++R E
Sbjct: 480 DRLVMLLTGSTSIRDVLLFPYMRPE 504
>gi|384081717|ref|ZP_09992892.1| lysyl-tRNA synthetase [gamma proteobacterium HIMB30]
Length = 504
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 224/444 (50%), Positives = 310/444 (69%), Gaps = 21/444 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
ML+R+MGK SF+ +QD SG +IQLY + +Y DFK +D+GDI+G +GTLFK
Sbjct: 74 MLRRIMGKASFLTIQDASG-----RIQLYARKADLPDGVYDDFKTWDLGDIVGGRGTLFK 128
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TNTGELS+ ++ ++L+TKSLRPLP+K + L++ E +YR RY+DL+ N+ TR VF R+++
Sbjct: 129 TNTGELSVHLTEIRLLTKSLRPLPDKHKGLTDTEQRYRQRYVDLMTNDETRHVFTLRSKV 188
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I++IRHF E DF+EVETP+L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++G
Sbjct: 189 IAAIRHFFESRDFLEVETPMLQVIPGGATARPFVTHHNALDIDMYLRIAPELYLKRLVVG 248
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y L+ TE +++++ + G T
Sbjct: 249 GFERVFEINRNFRNEGLSTRHNPEFTMLEFYWAYADYRDLIATTEALLREVAHNVCGKTV 308
Query: 241 IDYQ-GRLLDFSKSFEKLTIIEAIKKYTPQYNEI---DLQNKLFLKSELK-KINPKFNQK 295
+ G +D +SF LT+ EAI KY Q + DL L L K+ +
Sbjct: 309 FTLEDGSQVDLEESFHTLTVKEAILKYCDQATDAVLDDLAQATMLAQSLGLKVESSWGLG 368
Query: 296 KILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFII 355
K+ Q+ +FE E +L +PT+IT YP E+SPLAR+ N EN +T+RFE FI
Sbjct: 369 KV---------QIEIFEAVAEEQLMHPTFITEYPAEVSPLARR-NDENPFVTDRFEFFIG 418
Query: 356 GNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIG 415
G E+ANGFSELND E+Q+ RF+ Q+ K + + E + +YD DY+ ALEYG+PP +G GIG
Sbjct: 419 GRELANGFSELNDAEDQAQRFREQVAQKADGDDE-AMFYDDDYVRALEYGLPPTAGEGIG 477
Query: 416 VDRLIMLLTNSKNIRDVILFPHLR 439
+DRL+M L +IRDVILFP +R
Sbjct: 478 IDRLVMFLAEQHSIRDVILFPAMR 501
>gi|389872011|ref|YP_006379430.1| lysyl-tRNA ligase [Advenella kashmirensis WT001]
gi|388537260|gb|AFK62448.1| lysyl-tRNA ligase [Advenella kashmirensis WT001]
Length = 488
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 214/380 (56%), Positives = 289/380 (76%), Gaps = 7/380 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ+Y+ + +G+ +Y FK +DIGDIIG G +FK
Sbjct: 75 MLKRVMGKASFATIQDASG-----RIQIYLDKKGVGEEVYEQFKTWDIGDIIGVSGRVFK 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELSI S+ LI+KSLRPLP+KF +++QE++YR RY+DLI+ E +R FK R++
Sbjct: 130 TNKGELSIHAESINLISKSLRPLPDKFHGIADQELRYRQRYVDLIMTEESRNTFKVRSKA 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+++R M F+EVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRL++G
Sbjct: 190 IAAMRSVMNDAGFLEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPELYLKRLVVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE++++ + ++ G+
Sbjct: 250 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYQWLMDFTEQLLRDVAIEATGSAV 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ +QG+ LD S+ F++LTI +AI KY Y E L + FL++EL+++ + + +L
Sbjct: 310 LTHQGKPLDLSQPFDRLTITQAIMKYAEGYTEPQLNDIEFLRTELRRLGAEVD-GPVLAR 368
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E+KLWNPT+I +YP E+SPLAR S+ N ITERFELFI G EIA
Sbjct: 369 AGIGALQLALFEETAESKLWNPTFIIDYPVEVSPLARASD-SNPEITERFELFITGREIA 427
Query: 361 NGFSELNDPEEQSVRFKNQI 380
NGFSELNDPE+Q+ RF++++
Sbjct: 428 NGFSELNDPEDQAARFQHRL 447
>gi|375109351|ref|ZP_09755600.1| lysyl-tRNA synthetase [Alishewanella jeotgali KCTC 22429]
gi|393764226|ref|ZP_10352838.1| lysyl-tRNA ligase [Alishewanella agri BL06]
gi|397170920|ref|ZP_10494330.1| lysyl-tRNA synthetase [Alishewanella aestuarii B11]
gi|374570655|gb|EHR41789.1| lysyl-tRNA synthetase [Alishewanella jeotgali KCTC 22429]
gi|392604856|gb|EIW87755.1| lysyl-tRNA ligase [Alishewanella agri BL06]
gi|396087394|gb|EJI84994.1| lysyl-tRNA synthetase [Alishewanella aestuarii B11]
Length = 506
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 222/445 (49%), Positives = 316/445 (71%), Gaps = 23/445 (5%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF LQD G K Q+Y++ + + + LY D FK +D+GDI+G KG LF
Sbjct: 74 MTRRIMGKASFCTLQDMGG-----KFQVYVARDSLPEGLYNDQFKKWDLGDILGVKGYLF 128
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGEL++ + ++L+TK+LRPLP+KF L++ E +YR RY+DLI NE +RK F R++
Sbjct: 129 KTQTGELTVWATEIRLLTKALRPLPDKFHGLTDNEARYRQRYLDLISNEQSRKTFLVRSK 188
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
++ IR F ++ F+EVETP+L PGGA A+PF THHN+L+M+MFLRIAPELYLKRL++
Sbjct: 189 TVAYIRRFFNEHGFLEVETPMLQAIPGGASARPFETHHNALDMQMFLRIAPELYLKRLVV 248
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF K+FE+N+NFRNEG+S RHNPEFTM+EFY AY +Y LM TEK+ + + +D +G+T
Sbjct: 249 GGFEKVFELNRNFRNEGVSTRHNPEFTMLEFYWAYADYNDLMDLTEKLFRGLALDVLGST 308
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKK-----INPKFNQ 294
++ YQG + DF K F ++++ E+I Y P + L + + +EL K + +
Sbjct: 309 EVPYQGEVFDFGKPFARMSVTESILHYNPSITKEQLATRESV-AELAKSLGIEVKANYGH 367
Query: 295 KKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFI 354
+IL + +F+E ETKL +PT+IT YP E+SPLAR+ N +N IT+RFE FI
Sbjct: 368 GRIL---------MEVFDELVETKLRHPTFITEYPAEVSPLARR-NDDNPEITDRFEFFI 417
Query: 355 IGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGI 414
G E+ NGFSELND E+Q+ RF+ Q+ K+ + E + +YD D++ ALE+G+PP +G GI
Sbjct: 418 GGRELGNGFSELNDAEDQAERFREQVAQKDAGDDE-AMFYDEDFVTALEHGLPPTAGQGI 476
Query: 415 GVDRLIMLLTNSKNIRDVILFPHLR 439
G+DRL+MLL ++ +IRDVILFPH+R
Sbjct: 477 GIDRLVMLLADAASIRDVILFPHMR 501
>gi|145297979|ref|YP_001140820.1| lysyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
A449]
gi|418361820|ref|ZP_12962467.1| lysyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
01-B526]
gi|166229791|sp|A4SJK0.1|SYK_AERS4 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|142850751|gb|ABO89072.1| lysyl tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
A449]
gi|356686936|gb|EHI51526.1| lysyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
01-B526]
Length = 512
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 224/445 (50%), Positives = 319/445 (71%), Gaps = 18/445 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF LQD +G KIQ+Y++ + + + Y + FK +D+GDI+G +GTLF
Sbjct: 76 MTRRIMGKASFATLQDMAG-----KIQIYVTRDDLPEGFYNEQFKKWDLGDIVGVEGTLF 130
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
+TNTGELS+ VS+++L+TK+LRPLP K + L++QE + R RY+DLI NE +RK F RT+
Sbjct: 131 RTNTGELSVHVSTIRLLTKALRPLPEKHKGLTDQEARCRQRYLDLIANEESRKTFMIRTK 190
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR F FMEVETP++ PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 191 VVAGIRKFFNDKRFMEVETPMMQVIPGGASARPFVTHHNALDIDMYLRIAPELYLKRLVV 250
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF +++EIN+NFRNEGIS RHNPEFTMIEFY AY +YI LM TE++++ + D +G T
Sbjct: 251 GGFERVYEINRNFRNEGISVRHNPEFTMIEFYMAYADYIDLMDLTEELLRTLAQDILGDT 310
Query: 240 KIDY-----QGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQ 294
KI Y +G +DF + F++LT++++I K+ P DL K+ K ++ + +
Sbjct: 311 KIRYAKEGEEGLTIDFGQPFQRLTMVDSILKFNPDVTPADLATLESAKAVAKHLHIELMK 370
Query: 295 KKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFI 354
L ++ I FEET E L PT+IT YP +SPLAR++++ N ++T+RFE FI
Sbjct: 371 GWELGHVITAI-----FEETVEHMLLQPTFITEYPAAVSPLARRNDV-NPDVTDRFEFFI 424
Query: 355 IGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGI 414
G E+ANGFSELND E+Q+ RF++Q++ K E + + +YD D++ ALE+G+PP +G GI
Sbjct: 425 GGRELANGFSELNDAEDQAKRFQDQVNQK-EAGDDEAMFYDADFVTALEHGLPPTAGQGI 483
Query: 415 GVDRLIMLLTNSKNIRDVILFPHLR 439
G+DRL+ML TNS IRDVILFP LR
Sbjct: 484 GIDRLVMLFTNSHTIRDVILFPALR 508
>gi|374313948|ref|YP_005060377.1| lysyl-tRNA synthetase [Serratia symbiotica str. 'Cinara cedri']
gi|363988174|gb|AEW44365.1| lysyl-tRNA synthetase [Serratia symbiotica str. 'Cinara cedri']
Length = 505
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 233/440 (52%), Positives = 313/440 (71%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD + G IQLY++ +++ +LY D FK +D+GDIIGA+GTLF
Sbjct: 75 MTRRIMGKSSFVTLQD-----AGGCIQLYVACDVLTIDLYNDHFKKWDLGDIIGARGTLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI L L+TKSLRPLP+KF L+++E YR RY+DLI+NE +R FK R+Q
Sbjct: 130 KTKTGELSINCIELHLLTKSLRPLPDKFHGLTDKETCYRQRYLDLIVNERSRDTFKLRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+I SIR+FM ++ F+EVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 LIISIRNFMIEHGFLEVETPMMQVIPGGASARPFITHHNALDIDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++F E + + GT+
Sbjct: 250 GGFERVFEINRNFRNEGISSRHNPEFTMMELYMAYADYNDLIEFIELLFCTLAEKVKGTS 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y + DFSK FEKL I EAIKKY P+ + DL + + + K I + + L
Sbjct: 310 LVHYGDVVFDFSKPFEKLAITEAIKKYRPEIDLADLSDIVKAIAVAKSIGIEVEKNWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FE E +L PT+IT YP E+SPLAR+ N +N+ IT+RFELFI G EI
Sbjct: 370 RIVTEI-----FEAVVEGQLIQPTFITGYPAEVSPLARR-NDQNSEITDRFELFIGGYEI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF Q +K ++ ++YD DYI ALE+G+PP +G G+G+DR+
Sbjct: 424 GNGFSELNDSEDQARRFATQASIKG-VSDRDDAFYDADYIIALEHGLPPTAGLGLGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TN+ IRDVILFP +R
Sbjct: 483 VMLFTNNHTIRDVILFPAMR 502
>gi|304414310|ref|ZP_07395678.1| Lysyl-tRNA synthetase (class II) [Candidatus Regiella insecticola
LSR1]
gi|304283524|gb|EFL91920.1| Lysyl-tRNA synthetase (class II) [Candidatus Regiella insecticola
LSR1]
Length = 504
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 229/440 (52%), Positives = 308/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD + G IQLY+ + + K Y + FK +D+GDI+GA+GTLF
Sbjct: 75 MTRRIMGKASFVTLQD-----AGGCIQLYVERDHLPKEFYNEKFKKWDLGDILGAQGTLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI+ + L+L+TK+LRPLP+KF L+++E+ YR RY+DLI+NE R+ FK R+Q
Sbjct: 130 KTKTGELSIRCTELRLLTKALRPLPDKFHGLADKEMCYRQRYLDLIVNEEARRTFKIRSQ 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+I+ +R FM FMEVETP++ PGGA+A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 LIAGMRQFMVDKGFMEVETPMMQVIPGGAVARPFITHHNALDIDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEG+S RHNPEFTM+E Y AY +Y LMK TE++ + + +G+
Sbjct: 250 GGFERVFEINRNFRNEGLSSRHNPEFTMMELYMAYADYRDLMKLTEELFRTLTQTVLGSN 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
I Y DF+K F +LT+ EAI +Y Q + DL + KI KI
Sbjct: 310 IITYGDNTFDFAKPFARLTMKEAICQYCSQIDAPDLDK----MDKAVKIAQSLG-IKIDK 364
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
N +Q +FE T E L PT+IT YP E+SPLAR+ N +N IT+RFE FI G EI
Sbjct: 365 NWGLGRIQCEIFEATAEEHLVQPTFITEYPAEVSPLARR-NDDNPLITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF Q+ + + E + +YD DY+ ALE+GMPP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAERFDAQVKARTGGDSE-AMFYDKDYVTALEHGMPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS +IRDVILFP +R
Sbjct: 483 VMLFTNSHSIRDVILFPAMR 502
>gi|350563998|ref|ZP_08932817.1| lysyl-tRNA synthetase [Thioalkalimicrobium aerophilum AL3]
gi|349777998|gb|EGZ32357.1| lysyl-tRNA synthetase [Thioalkalimicrobium aerophilum AL3]
Length = 507
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 227/447 (50%), Positives = 320/447 (71%), Gaps = 21/447 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
ML+R+MGK SF LQD SG +IQ+Y++ + + + Y + FK +D+GDI+G G LF
Sbjct: 77 MLRRIMGKASFATLQDMSG-----RIQVYVTRDDLPEGFYNEQFKKWDLGDIVGVSGYLF 131
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KTNT ELSI V S++LITKSLRPLP+KF L +QE++YR RY+DLI++E +RK F+ R++
Sbjct: 132 KTNTDELSIHVESIELITKSLRPLPDKFHGLQDQEVRYRQRYLDLIMSEQSRKTFEVRSK 191
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+I ++R F + FMEVETP++ PGGA AKPF+THHN+L+M ++LRIAPELYLKRL++
Sbjct: 192 VIHAMREFFVRKGFMEVETPMMQVIPGGASAKPFVTHHNALDMPLYLRIAPELYLKRLLV 251
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y +M +TE+M K++ + +
Sbjct: 252 GGFEKVFEINRNFRNEGLSTRHNPEFTMVEFYEAYADYNDMMDYTEEMFKELAHLVLNSG 311
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQN---KLFLKSELK-KINPKFNQK 295
++ YQG++ F + F ++ + ++I + N DL + + L +LK I P +
Sbjct: 312 EVPYQGQVFHFDQPFARIPLKQSIAMFNEGVNADDLDDIEYCIALAEKLKIDIRPGYGLG 371
Query: 296 KILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFII 355
KI Q +FEET E +L PT+IT YP E+SPLAR+ N N +T+RFELFI
Sbjct: 372 KI---------QTEIFEETVEHRLMEPTFITEYPAEVSPLARR-NDANPFVTDRFELFIG 421
Query: 356 GNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIG 415
G E+ANGFSELND E+Q+ RF Q+ K+ + E + +YD D+I ALE+GMPPA+G GIG
Sbjct: 422 GRELANGFSELNDAEDQAERFMEQVKAKDAGDDE-AMHYDADFITALEHGMPPAAGQGIG 480
Query: 416 VDRLIMLLTNSKNIRDVILFPHLRNEN 442
+DRL+ML T+S +I+DV+LFPH+R++
Sbjct: 481 IDRLVMLFTDSASIKDVLLFPHMRHQG 507
>gi|21231301|ref|NP_637218.1| lysyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
ATCC 33913]
gi|66768647|ref|YP_243409.1| lysyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
8004]
gi|39932239|sp|Q9L3G6.1|SYK_XANCP RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|81305381|sp|Q4UU84.1|SYK_XANC8 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|7688055|emb|CAB89697.1| putative lysyl tRNA synthetase [Xanthomonas campestris pv.
campestris]
gi|21112955|gb|AAM41142.1| putative lysyl tRNA synthetase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66573979|gb|AAY49389.1| putative lysyl tRNA synthetase [Xanthomonas campestris pv.
campestris str. 8004]
Length = 505
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 216/445 (48%), Positives = 310/445 (69%), Gaps = 21/445 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M KRVMGK SF +QD SG ++QL++ ++G + YT FK +D+GDI+ +G L +
Sbjct: 77 MAKRVMGKASFAQIQDESG-----RVQLFLQGNVLG-DAYTAFKGWDVGDIVAVEGGLTR 130
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+K ++L+L+TKSLRPLP+K+ LS+ E +YR RY+DLI+ R+VF KR++I
Sbjct: 131 TKTGELSVKATALRLLTKSLRPLPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFIKRSKI 190
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I +IR +++ F+EVETP++H PGGA AKPF THHN+L++ ++LR+APELYLKRL++G
Sbjct: 191 IRAIRAWLDARRFLEVETPMMHYIPGGATAKPFTTHHNALDLDLYLRVAPELYLKRLVVG 250
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G +++EIN+NFRNEG+S RHNPEFTM+E Y AY Y +M TE++I+ +GTT+
Sbjct: 251 GLERVYEINRNFRNEGVSTRHNPEFTMLELYEAYATYHEIMDLTEQVIRDTAQGVLGTTQ 310
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELK----KINPKFNQKK 296
+ + G +D + +F + + EA++ + P+ + D ++ L + K+ P + K
Sbjct: 311 VSWDGADIDLAPAFRRWRMDEAVRHHNPEISAADCTDRAALLRHCERLKIKVKPSYGWGK 370
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
+L L +FE T E L PT+IT++P E+SPLAR S+ E T+RFELFI G
Sbjct: 371 LL---------LEIFESTVEHTLVQPTFITDHPVEVSPLARASDTE-PGYTDRFELFING 420
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELNDPE+Q+ RF+ Q+ K+ + E + +YD DYI ALEYGM P G GIG+
Sbjct: 421 KELANGFSELNDPEDQAARFQAQVQAKDGGDDE-AMHYDADYIRALEYGMAPTGGLGIGI 479
Query: 417 DRLIMLLTNSKNIRDVILFPHLRNE 441
DRL+MLLT S +IRDV+LFP++R E
Sbjct: 480 DRLVMLLTGSTSIRDVLLFPYMRPE 504
>gi|238897259|ref|YP_002922936.1| lysyl-tRNA synthetase [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|229465014|gb|ACQ66788.1| lysine tRNA synthetase, inducible [Candidatus Hamiltonella defensa
5AT (Acyrthosiphon pisum)]
Length = 504
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 234/442 (52%), Positives = 318/442 (71%), Gaps = 17/442 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYT-DFKNYDIGDIIGAKGTLF 59
M +R+MGK SF LQDT G +IQLY+S + + + +Y DFK +D+GDI+G +G LF
Sbjct: 74 MTRRIMGKASFFTLQDTKG-----RIQLYVSRDDLPEGIYNEDFKKWDLGDILGVRGRLF 128
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELS+ + L+L+TK+LRPLP+KF L +QE +YR RY+DLI+NE +RK F R++
Sbjct: 129 KTKTGELSVHCTELRLLTKALRPLPDKFHGLLDQEARYRQRYLDLIVNEKSRKNFILRSK 188
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
IS +R FM FMEVETP++ + PGGA A+PF+THHN+LN+ M+LRIAPELYLKRL++
Sbjct: 189 TISMLRQFMMGKGFMEVETPMMQSIPGGAAARPFLTHHNALNIDMYLRIAPELYLKRLVV 248
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF++IFEIN+NFRNEGIS RHNPEFTM+E Y AY ++ L++ TE++ +++ ++ +GT
Sbjct: 249 GGFDRIFEINRNFRNEGISLRHNPEFTMMELYMAYADHQDLIELTEELFRELTLNVLGTH 308
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQ--NKLFLKSELKKINPKFNQKKI 297
+ Y + DFS+ F+K T+ EAI+KY P+ N DL+ NK L +E + ++
Sbjct: 309 VVKYGEHIFDFSQPFQKWTMKEAIQKYRPEININDLEDKNKAILIAESLDV-------RV 361
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
+ +Q +FEET E L PT+IT YP E+SPLAR+ N N+ I +RFE FI G
Sbjct: 362 EKFWELGRIQCEIFEETAEKHLIQPTFITEYPAEVSPLARR-NDHNSFIADRFEFFIAGK 420
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND E+Q+ RF Q++ K + + E S YD DYI ALE+G+PP +G GIG+D
Sbjct: 421 EIGNGFSELNDAEDQAQRFTEQLNSKEKGDHEAMS-YDQDYIIALEHGLPPTAGLGIGID 479
Query: 418 RLIMLLTNSKNIRDVILFPHLR 439
R+IMLLTNS NIRDVILFP +R
Sbjct: 480 RMIMLLTNSINIRDVILFPTMR 501
>gi|383316953|ref|YP_005377795.1| lysyl-tRNA synthetase [Frateuria aurantia DSM 6220]
gi|379044057|gb|AFC86113.1| lysyl-tRNA synthetase (class II) [Frateuria aurantia DSM 6220]
Length = 508
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 218/447 (48%), Positives = 312/447 (69%), Gaps = 22/447 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
+LKRV GK+SF+ +QD SG +IQL+I +G Y FK +D+GDI+GA+G L +
Sbjct: 77 VLKRVQGKVSFVQIQDFSG-----RIQLFIHAGTVGDETYQGFKTWDVGDIVGARGLLMR 131
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS++V L+L+TKSLRPLP+KF LS+ E +YR RY+DLI+ E R+ F R++I
Sbjct: 132 TKTGELSLRVEELRLLTKSLRPLPDKFHGLSDVEQRYRRRYVDLIVTEEARRTFALRSRI 191
Query: 121 ISSIRHFMEKND--FMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
I IR ++E FMEVETP++H PGGA AKPFITHHN+L++ ++LR+APELYLKRL+
Sbjct: 192 IGFIRSWLEAEPRRFMEVETPMMHVIPGGASAKPFITHHNALDLDLYLRVAPELYLKRLV 251
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF +++EIN+NFRNEG+S RHNPEFTM+E Y AY Y +M TE +I+ +G+
Sbjct: 252 VGGFERVYEINRNFRNEGVSTRHNPEFTMLELYQAYATYHDIMDLTEDVIRDCAQSVLGS 311
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKK----INPKFNQ 294
T++ + G +D +F + + +A+ ++ P+ + DL+N+ + + + P +
Sbjct: 312 TEVQWDGADIDVGPAFRRWRMEDAVLEHNPEISRDDLRNREAMADHATRLGIHVKPGYGW 371
Query: 295 KKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFI 354
K+L L +FE T E L PT+IT++P E+SPLAR+S+ + IT+RFELF+
Sbjct: 372 GKLL---------LEIFEHTVEHTLIQPTFITDHPVEVSPLARESDT-DPGITDRFELFV 421
Query: 355 IGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGI 414
G E+ANGFSELNDPE+Q+ RF+ Q+D K+ + E + ++D DYI ALE G+PP G GI
Sbjct: 422 NGKELANGFSELNDPEDQAARFQAQVDAKDAGDDE-AMHFDADYIRALEVGLPPTGGLGI 480
Query: 415 GVDRLIMLLTNSKNIRDVILFPHLRNE 441
G+DRL+MLLT S +IRDV+LFP++R E
Sbjct: 481 GIDRLVMLLTGSASIRDVLLFPYMRPE 507
>gi|389808263|ref|ZP_10204673.1| lysyl-tRNA ligase [Rhodanobacter thiooxydans LCS2]
gi|388443141|gb|EIL99300.1| lysyl-tRNA ligase [Rhodanobacter thiooxydans LCS2]
Length = 507
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 213/443 (48%), Positives = 317/443 (71%), Gaps = 14/443 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
+LKRV GK+SF LQD +G +IQL+I +G+ +Y FK +D+GDI+GA+GTL +
Sbjct: 76 VLKRVQGKVSFAQLQDMTG-----RIQLFIHQGTVGEAVYEAFKGWDMGDIVGAEGTLMR 130
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS++V L+L+TKSLRPLP+K +++ E +YR RY+DLI+ E R+ F R++I
Sbjct: 131 TKTGELSVRVDQLRLLTKSLRPLPDKHHGMADVEQRYRQRYVDLIVTEEARRTFMLRSKI 190
Query: 121 ISSIRHFMEK--NDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
I +R ++E + FMEVETP++H PGGA AKPF+THHN+L++ ++LR+APELYLKRL+
Sbjct: 191 IGYMRQWLEAPAHRFMEVETPMMHIIPGGATAKPFVTHHNALDLDLYLRVAPELYLKRLV 250
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF++++EIN+NFRNEG+S RHNPEFTM+E Y AY Y +M TE +I+ +GT
Sbjct: 251 VGGFDRVYEINRNFRNEGVSTRHNPEFTMLELYQAYATYHEIMDLTEAVIRDTAQAVLGT 310
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T++++ G +D +F + + +A+ ++ P+ +L+++ + + +++ ++
Sbjct: 311 TQLEWDGAAIDVGPAFRRWRMEDAVLEHNPEIRREELRDRGAMAAHARRLG-----VQVK 365
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
+N L L +FE+T E L PT+IT +P E+SPLAR+++ + IT+RFELFI G E
Sbjct: 366 DNYGWGKLLLEIFEKTVEHTLVQPTFITQHPVEVSPLARENDT-DKGITDRFELFIGGKE 424
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IANGFSELNDPE+Q+ RF+ Q+D K+ + E + ++D DYI ALE G+PP G GIG+DR
Sbjct: 425 IANGFSELNDPEDQAARFQAQVDAKDAGDDE-AMHFDADYIRALEVGLPPTGGLGIGIDR 483
Query: 419 LIMLLTNSKNIRDVILFPHLRNE 441
L+MLLT S +IRDV+LFP++R E
Sbjct: 484 LVMLLTGSSSIRDVLLFPYMRPE 506
>gi|336314941|ref|ZP_08569855.1| lysyl-tRNA synthetase (class II) [Rheinheimera sp. A13L]
gi|335880768|gb|EGM78653.1| lysyl-tRNA synthetase (class II) [Rheinheimera sp. A13L]
Length = 508
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 222/448 (49%), Positives = 316/448 (70%), Gaps = 23/448 (5%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
ML+R+MGK SF +QD G K+QLY++ + + +N+Y + FK +D+GDI+G G LF
Sbjct: 74 MLRRIMGKASFTTIQDVGG-----KLQLYVARDSLAENVYNEGFKKWDLGDIVGGSGVLF 128
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGEL++ + ++L+TK+LRPLP+KF L+++E YR RY+DLI+N+ +RK F R++
Sbjct: 129 KTQTGELTVWLDEIRLLTKALRPLPDKFHGLTDKEACYRQRYLDLIVNDQSRKTFLIRSK 188
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
++ IR F F+EVETP+L + PGGA A+PF THHN+L+M+MFLRIAPELYLKRL++
Sbjct: 189 TVAYIRQFFNSKGFLEVETPMLQSIPGGASARPFETHHNALDMQMFLRIAPELYLKRLVV 248
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF K+FE+N+NFRNEG+S RHNPEFTM+EFY AY +Y LM TE++ + + +GTT
Sbjct: 249 GGFEKVFELNRNFRNEGVSTRHNPEFTMLEFYWAYADYNDLMDITEELFRGLAQSVLGTT 308
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKK-----INPKFNQ 294
++ YQG L DF K F ++++ E+I Y P+ L + + +EL K + +
Sbjct: 309 EVPYQGNLFDFGKPFARMSVTESILHYNPELKIEQLTTREAV-AELAKSLGIEVKANYGH 367
Query: 295 KKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFI 354
+IL + +F+E ETKL PT+IT YP EISPLAR+ N +N IT+RFE FI
Sbjct: 368 GRIL---------MEVFDELVETKLQQPTFITEYPAEISPLARR-NDDNPEITDRFEFFI 417
Query: 355 IGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGI 414
G E+ NGFSELND E+Q+ RF+ Q+ K E + + YYD D++ ALE+G+PP +G GI
Sbjct: 418 GGRELGNGFSELNDAEDQAERFREQVAQK-EAGDDEAMYYDEDFVTALEHGLPPTAGQGI 476
Query: 415 GVDRLIMLLTNSKNIRDVILFPHLRNEN 442
G+DRL+MLL ++ +IRDVILFPH+R+ +
Sbjct: 477 GIDRLVMLLADAPSIRDVILFPHMRHSD 504
>gi|387126792|ref|YP_006295397.1| lysyl-tRNA synthetase [Methylophaga sp. JAM1]
gi|386273854|gb|AFI83752.1| Lysyl-tRNA synthetase (class II) [Methylophaga sp. JAM1]
Length = 499
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 221/446 (49%), Positives = 321/446 (71%), Gaps = 22/446 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M +RVMGK SF L+D SG IQ+Y++ + + + Y +FK +D+GDI+GA+G LF+
Sbjct: 71 MTQRVMGKASFATLRDMSG-----DIQIYVARDNLPEGFYANFKTWDLGDIVGAEGILFR 125
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T ELS++V S++L+TKSLRPLP KF LS+ E +YR RY+DLI+NE +R+ F+ RT++
Sbjct: 126 TQKDELSVRVESVQLLTKSLRPLPEKFHGLSDMETRYRQRYVDLIMNEASRETFRIRTKV 185
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I IR ++ D++EVETP++ PGGA A+PF T+HN+L+M +FLRIAPELYLKRLI+G
Sbjct: 186 IDGIRRYLMDKDYLEVETPMMQAIPGGATARPFTTYHNALDMDLFLRIAPELYLKRLIVG 245
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+S RHNPEFTM+EFY AY ++ LM TE M++ + + +G+++
Sbjct: 246 GFERVFEINRNFRNEGLSTRHNPEFTMVEFYQAYADFNDLMDLTEDMLRTVTQNVLGSSQ 305
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTP-----QYNEIDLQNKLFLKSELKKINPKFNQK 295
+ YQG +DF++ F+++T+ ++I + P Q + I+ ++ L + + +
Sbjct: 306 VHYQGLDIDFAQPFDRMTVKDSILHFNPDLKAEQLDSIEAAREVALGLGI-PLKDSYGLG 364
Query: 296 KILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFII 355
K+ Q+ +FE+T E +L PT+IT YPTE+SPLAR+S+ + +T+RFE F+
Sbjct: 365 KV---------QIEIFEKTVEHQLMQPTFITAYPTEVSPLARRSD-NDPFVTDRFEFFVG 414
Query: 356 GNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIG 415
G EIANGFSELND E+Q+ RFK Q+ K+ + E + +YD DYI ALEYGMPP +G GIG
Sbjct: 415 GREIANGFSELNDAEDQAERFKAQVAEKDAGDIE-AMHYDADYIRALEYGMPPTAGEGIG 473
Query: 416 VDRLIMLLTNSKNIRDVILFPHLRNE 441
+DRL+MLLT+S +IRDV+LFPH+R E
Sbjct: 474 IDRLVMLLTDSPSIRDVLLFPHMRPE 499
>gi|261345592|ref|ZP_05973236.1| lysine--tRNA ligase [Providencia rustigianii DSM 4541]
gi|282566072|gb|EFB71607.1| lysine--tRNA ligase [Providencia rustigianii DSM 4541]
Length = 505
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 226/440 (51%), Positives = 309/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF LQD G +IQ+Y+S + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 74 MTRRIMGKASFATLQDVGG-----RIQIYVSRDDLPEGVYNEQFKKWDLGDILGAKGRLF 128
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGEL++ ++L+TK+LRPLP+KF LS+QE +YR RY+DLI N+ +R F R++
Sbjct: 129 KTKTGELTVHCHEVRLLTKALRPLPDKFHGLSDQETRYRQRYLDLIANDESRNTFIIRSK 188
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ +R+FM FMEVETP++ PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 189 ILAEVRNFMVSQGFMEVETPMMQVIPGGASARPFVTHHNALDIDMYLRIAPELYLKRLVV 248
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEG+SPRHNPEFTM+E Y AY +Y L+K TE + + + + +G T
Sbjct: 249 GGFERVFEINRNFRNEGLSPRHNPEFTMMELYMAYADYRDLIKLTEDLFRTLTQEVLGNT 308
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y + DF K F KLT+ EAI KY P+ N DL + + + I K + L
Sbjct: 309 VVKYGEQEFDFGKPFAKLTMKEAICKYRPETNVADLDDMDKAVAIAQSIGIKIEKSWGLG 368
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+Q +FEE E+ L PT+IT YP E+SPLAR+ N +N IT+RFE FI G EI
Sbjct: 369 R-----IQCEIFEEVAESHLIQPTFITEYPAEVSPLARR-NDDNPFITDRFEFFIGGREI 422
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF Q+ K+E + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 423 GNGFSELNDAEDQAERFAEQVRQKDEGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 481
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP LR
Sbjct: 482 VMLFTNSHTIRDVILFPALR 501
>gi|197117228|ref|YP_002137655.1| lysyl-tRNA synthetase [Geobacter bemidjiensis Bem]
gi|197086588|gb|ACH37859.1| lysyl-tRNA synthetase [Geobacter bemidjiensis Bem]
Length = 492
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 227/444 (51%), Positives = 313/444 (70%), Gaps = 19/444 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
+++R GK +F+ +QD G++QLY+ + +G+ L+ +F+NYDIGDIIGA GT F+
Sbjct: 63 LMRRSFGKAAFVQVQD-----RKGRMQLYMKKDTLGEELFAEFENYDIGDIIGATGTPFR 117
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+ VS L+L+TKSL PLP KF L++ E +YR RY+DLI++ + R+VF KR+++
Sbjct: 118 TKTGELSLAVSELRLLTKSLLPLPEKFHGLTDVETRYRQRYVDLIVSPDVREVFYKRSRV 177
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I IR FM KNDF+EVETP++H PGGA AKPF THHN+L+M++FLRIAPELYLKRL++G
Sbjct: 178 IQLIRDFMTKNDFLEVETPMMHPIPGGATAKPFATHHNALDMELFLRIAPELYLKRLVVG 237
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEGIS RHNPEFTM+EFY AY + LM +TE+++ + + +GT
Sbjct: 238 GFERVFEINRNFRNEGISVRHNPEFTMMEFYQAYATFEDLMNYTEELLCHVAQELLGTLD 297
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEID---LQNKLFLKSELKKINPKFNQKKI 297
Y G + F + + + T+ EAI +Y +ID L+++ + +KI + +
Sbjct: 298 FSYGGEPISFQRPWRRFTVKEAIL----EYGDIDAKSLEDRDLAYAYAQKIGLELPEDVG 353
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L +I FEE E KL PT+ITNYPTE+SPL+RKS+ ++ +RFE F G
Sbjct: 354 YGKLITEI-----FEEVAEIKLIQPTFITNYPTEVSPLSRKSD-QDPEYVDRFEFFCAGR 407
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
E+AN FSELNDP +Q RF Q+ K++ + E + Y D DYI ALEYG+PP +G GIG+D
Sbjct: 408 EMANAFSELNDPRDQKERFLAQVAAKDKGDEE-AHYMDEDYIRALEYGLPPTAGEGIGID 466
Query: 418 RLIMLLTNSKNIRDVILFPHLRNE 441
RL+MLLT+S +IRDVILFP LR E
Sbjct: 467 RLVMLLTDSPSIRDVILFPQLRKE 490
>gi|352081997|ref|ZP_08952820.1| lysyl-tRNA synthetase [Rhodanobacter sp. 2APBS1]
gi|351682135|gb|EHA65241.1| lysyl-tRNA synthetase [Rhodanobacter sp. 2APBS1]
Length = 510
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 216/447 (48%), Positives = 316/447 (70%), Gaps = 23/447 (5%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
+LKRV GK+SF+ LQD SG +IQL+I +G+ Y FK +D+GDI+GA+G L +
Sbjct: 80 VLKRVQGKVSFVQLQDFSG-----RIQLFIHQGTLGEA-YEAFKGWDVGDIVGAEGVLMR 133
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS++V L+L+TKSLRPLP+KF L++ E +YR RY+DLI+ E R+ F R++I
Sbjct: 134 TKTGELSVRVDRLRLLTKSLRPLPDKFHGLADVEQRYRQRYVDLIVTEEARRTFMLRSKI 193
Query: 121 ISSIRHFMEK--NDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
I +R ++E FMEVETP++H PGGA AKPF+THHN+L++ ++LR+APELYLKRL+
Sbjct: 194 IGFMRQWLEAPSRRFMEVETPMMHVIPGGATAKPFVTHHNALDLDLYLRVAPELYLKRLV 253
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF++++EIN+NFRNEG+S RHNPEFTM+E Y AY Y +M TE +I+ +GT
Sbjct: 254 VGGFDRVYEINRNFRNEGVSTRHNPEFTMLELYQAYATYHEIMDLTEAVIRDTAQAVLGT 313
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKK----INPKFNQ 294
T++++ G +D +F + + +A+ ++ P +L+++ + + ++ + P +
Sbjct: 314 TQLEWDGAAIDVGPAFRRWRMEDAVLEHNPGIRREELRDREAMAAHARRLGVQVKPGYGW 373
Query: 295 KKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFI 354
K+L L +FE+T E L PT+IT++P E+SPLAR+S+ + IT+RFELF+
Sbjct: 374 GKLL---------LEIFEKTVEHTLIQPTFITDHPVEVSPLARESDT-DKGITDRFELFV 423
Query: 355 IGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGI 414
G EIANGFSELNDPE+Q+ RF+ Q+D K+ + E + ++D DYI ALE G+PP G GI
Sbjct: 424 GGKEIANGFSELNDPEDQAARFQAQVDAKDAGDDE-AMHFDADYIRALEVGLPPTGGLGI 482
Query: 415 GVDRLIMLLTNSKNIRDVILFPHLRNE 441
G+DRL+MLLT S +IRDV+LFP++R E
Sbjct: 483 GIDRLVMLLTGSSSIRDVLLFPYMRPE 509
>gi|84624383|ref|YP_451755.1| lysyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|123752737|sp|Q2P1U6.1|SYK_XANOM RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|84368323|dbj|BAE69481.1| lysyl-tRNA synthetase heat inducible [Xanthomonas oryzae pv. oryzae
MAFF 311018]
Length = 505
Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust.
Identities = 215/445 (48%), Positives = 311/445 (69%), Gaps = 21/445 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M KRVMGK SF +QD SG ++QL++ ++G + YT FK +D+GDI+ +G L +
Sbjct: 77 MAKRVMGKASFAQIQDESG-----RVQLFLQGNVLG-DAYTAFKGWDVGDIVAVEGGLTR 130
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+K S+L+L+TKSLRPLP+K+ LS+ E +YR RY+DLI+ R+VF KR++I
Sbjct: 131 TKTGELSVKASALRLLTKSLRPLPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFIKRSKI 190
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I ++R +++ F+EVETP++H PGGA AKPF THHN+L++ ++LR+APELYLKRL++G
Sbjct: 191 IRAMRAWLDARRFLEVETPMMHYIPGGATAKPFTTHHNALDLDLYLRVAPELYLKRLVVG 250
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G +++EIN+NFRNEG+S RHNPEFTM+E Y AY Y +M TE++I+ +GTT+
Sbjct: 251 GLERVYEINRNFRNEGVSTRHNPEFTMLELYEAYATYHEIMDLTEQVIRDTAQSVLGTTQ 310
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELK----KINPKFNQKK 296
+ + G +D + +F + + EA++ + P+ + D ++ L + ++ P + K
Sbjct: 311 VSWDGADIDLAPAFRRWRMDEAVRHHNPEISAADCTDRDALLRHCERLKIRVKPSYGWGK 370
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
+L L +FE T E L PT+IT++P E+SPLAR S+ E T+RFELFI G
Sbjct: 371 LL---------LEIFEATVEHTLVQPTFITDHPVEVSPLARSSDTE-PGYTDRFELFING 420
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELNDPE+Q+ RF+ Q+ K+ + E + ++D DYI ALEYGMPP G GIG+
Sbjct: 421 KELANGFSELNDPEDQAARFQAQVQAKDGGDDE-AMHFDADYIRALEYGMPPTGGLGIGI 479
Query: 417 DRLIMLLTNSKNIRDVILFPHLRNE 441
DRL+MLLT S +IRDV+LFP++R E
Sbjct: 480 DRLVMLLTGSTSIRDVLLFPYMRPE 504
>gi|389796763|ref|ZP_10199814.1| lysyl-tRNA ligase [Rhodanobacter sp. 116-2]
gi|388448288|gb|EIM04273.1| lysyl-tRNA ligase [Rhodanobacter sp. 116-2]
Length = 510
Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust.
Identities = 216/447 (48%), Positives = 316/447 (70%), Gaps = 23/447 (5%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
+LKRV GK+SF+ LQD SG +IQL+I +G+ Y FK +D+GDI+GA+G L +
Sbjct: 80 VLKRVQGKVSFVQLQDFSG-----RIQLFIHQGTLGET-YEAFKGWDVGDIVGAEGVLMR 133
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS++V L+L+TKSLRPLP+KF L++ E +YR RY+DLI+ E R+ F R++I
Sbjct: 134 TKTGELSVRVDQLRLLTKSLRPLPDKFHGLADVEQRYRQRYVDLIVTEEARRTFMLRSKI 193
Query: 121 ISSIRHFMEK--NDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
I +R ++E FMEVETP++H PGGA AKPF+THHN+L++ ++LR+APELYLKRL+
Sbjct: 194 IGFMRQWLEAPSRRFMEVETPMMHVIPGGATAKPFVTHHNALDLDLYLRVAPELYLKRLV 253
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF++++EIN+NFRNEG+S RHNPEFTM+E Y AY Y +M TE +I+ +GT
Sbjct: 254 VGGFDRVYEINRNFRNEGVSTRHNPEFTMLELYQAYVTYHEIMDLTEAVIRDTAQAVLGT 313
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKK----INPKFNQ 294
T++++ G +D +F + + +A+ ++ P +L+++ + + ++ + P +
Sbjct: 314 TQLEWDGAAIDVGPAFRRWRMEDAVLEHNPGIRRGELRDREAMAAHARRLGVQVKPGYGW 373
Query: 295 KKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFI 354
K+L L +FE+T E L PT+IT++P E+SPLAR+S+ + IT+RFELF+
Sbjct: 374 GKLL---------LEIFEKTVEHTLIQPTFITDHPVEVSPLARESDT-DKGITDRFELFV 423
Query: 355 IGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGI 414
G EIANGFSELNDPE+Q+ RF+ Q+D K+ + E + ++D DYI ALE G+PP G GI
Sbjct: 424 GGKEIANGFSELNDPEDQAARFQAQVDAKDAGDDE-AMHFDADYIRALEVGLPPTGGLGI 482
Query: 415 GVDRLIMLLTNSKNIRDVILFPHLRNE 441
G+DRL+MLLT S +IRDV+LFP++R E
Sbjct: 483 GIDRLVMLLTGSSSIRDVLLFPYMRPE 509
>gi|58582495|ref|YP_201511.1| lysyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC 10331]
gi|58427089|gb|AAW76126.1| lysyl-tRNA synthetase heat inducible [Xanthomonas oryzae pv. oryzae
KACC 10331]
Length = 528
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 215/445 (48%), Positives = 311/445 (69%), Gaps = 21/445 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M KRVMGK SF +QD SG ++QL++ ++G + YT FK +D+GDI+ +G L +
Sbjct: 100 MAKRVMGKASFAQIQDESG-----RVQLFLQGNVLG-DAYTAFKGWDVGDIVAVEGGLTR 153
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+K S+L+L+TKSLRPLP+K+ LS+ E +YR RY+DLI+ R+VF KR++I
Sbjct: 154 TKTGELSVKASALRLLTKSLRPLPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFIKRSKI 213
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I ++R +++ F+EVETP++H PGGA AKPF THHN+L++ ++LR+APELYLKRL++G
Sbjct: 214 IRAMRAWLDARRFLEVETPMMHYIPGGATAKPFTTHHNALDLDLYLRVAPELYLKRLVVG 273
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G +++EIN+NFRNEG+S RHNPEFTM+E Y AY Y +M TE++I+ +GTT+
Sbjct: 274 GLERVYEINRNFRNEGVSTRHNPEFTMLELYEAYATYHEIMDLTEQVIRDTAQSVLGTTQ 333
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELK----KINPKFNQKK 296
+ + G +D + +F + + EA++ + P+ + D ++ L + ++ P + K
Sbjct: 334 VSWDGADIDLAPAFRRWRMDEAVRHHNPEISAADCTDRDALLRHCERLKIRVKPSYGWGK 393
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
+L L +FE T E L PT+IT++P E+SPLAR S+ E T+RFELFI G
Sbjct: 394 LL---------LEIFEATVEHTLVQPTFITDHPVEVSPLARSSDTE-PGYTDRFELFING 443
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELNDPE+Q+ RF+ Q+ K+ + E + ++D DYI ALEYGMPP G GIG+
Sbjct: 444 KELANGFSELNDPEDQAARFQAQVQAKDGGDDE-AMHFDADYIRALEYGMPPTGGLGIGI 502
Query: 417 DRLIMLLTNSKNIRDVILFPHLRNE 441
DRL+MLLT S +IRDV+LFP++R E
Sbjct: 503 DRLVMLLTGSTSIRDVLLFPYMRPE 527
>gi|253702017|ref|YP_003023206.1| lysyl-tRNA synthetase [Geobacter sp. M21]
gi|251776867|gb|ACT19448.1| lysyl-tRNA synthetase [Geobacter sp. M21]
Length = 492
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 228/445 (51%), Positives = 316/445 (71%), Gaps = 21/445 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
+++R GK +F+ +QD G++QLY+ + +G+ L+ +F+NYDIGDIIGA GT F+
Sbjct: 63 LMRRSFGKAAFVQVQD-----RKGRMQLYMKKDTLGEELFAEFENYDIGDIIGATGTPFR 117
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+ V+ L+L+TKSL PLP KF L++ E +YR RY+DLI++ + R+VF KR+++
Sbjct: 118 TKTGELSLAVTELRLLTKSLLPLPEKFHGLTDVETRYRQRYVDLIVSPDVREVFYKRSRV 177
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I IR FM KNDF+EVETP++H PGGA AKPF THHN+L+M++FLRIAPELYLKRL++G
Sbjct: 178 IQLIRDFMTKNDFLEVETPMMHPIPGGATAKPFATHHNALDMELFLRIAPELYLKRLVVG 237
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEGIS RHNPEFTM+EFY AY + LM +TE+++ + + +GT
Sbjct: 238 GFERVFEINRNFRNEGISVRHNPEFTMMEFYQAYATFEDLMNYTEELLCHVAQELLGTLD 297
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
Y G + F + + + T+ EAI +Y +ID ++ E + + ++Q KI
Sbjct: 298 FSYGGEPISFQRPWRRFTVKEAIL----EYGDIDAKS-----LEDRDLAYAYSQ-KIGLE 347
Query: 301 LKKDI----LQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L +D+ L +FEE E KL PT+ITNYPTE+SPL+RKS+ ++ +RFE F G
Sbjct: 348 LPEDVGYGKLITEIFEEVAEVKLIQPTFITNYPTEVSPLSRKSD-QDPEYVDRFEFFCAG 406
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+AN FSELNDP +Q RF Q+ K++ + E + Y D DYI ALEYG+PP +G GIG+
Sbjct: 407 REMANAFSELNDPRDQKERFLAQVAAKDKGDEE-AHYMDEDYIRALEYGLPPTAGEGIGI 465
Query: 417 DRLIMLLTNSKNIRDVILFPHLRNE 441
DRL+MLLT+S +IRDVILFP LR E
Sbjct: 466 DRLVMLLTDSPSIRDVILFPQLRKE 490
>gi|334705663|ref|ZP_08521529.1| lysyl-tRNA synthetase [Aeromonas caviae Ae398]
Length = 511
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 225/447 (50%), Positives = 317/447 (70%), Gaps = 22/447 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF LQD +G KIQ+Y++ + + + Y + FK +D+GDI+G +GTLF
Sbjct: 76 MTRRIMGKASFATLQDMAG-----KIQIYVTRDDLPEGFYNEQFKKWDLGDIVGVEGTLF 130
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
+TN GELS+ VS+++L+TK+LRPLP K + L++QE + R RY+DLI NE +RK F RT+
Sbjct: 131 RTNAGELSVHVSTIRLLTKALRPLPEKHKGLTDQEARCRQRYLDLIANEESRKTFVTRTK 190
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR F+ FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 191 VVAGIRKFLNDKRFMEVETPMMQVIPGGASARPFITHHNALDIDMYLRIAPELYLKRLVV 250
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF +++EIN+NFRNEGIS RHNPEFTM+EFY AY +YI LM TE+M++ + D +G T
Sbjct: 251 GGFERVYEINRNFRNEGISVRHNPEFTMLEFYMAYADYIDLMDLTEEMLRTLAQDILGDT 310
Query: 240 KIDY-----QGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQ 294
+I Y +G +DF + F++L+++++I KY P DL + L+K
Sbjct: 311 RIRYAKEGEEGLTIDFGQPFQRLSMVDSILKYNPGVTRDDL-------ATLEKATAVAKG 363
Query: 295 KKI--LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFEL 352
KI + + + + +FEET E L PT+IT YP +SPLAR+ N +N ++T+RFE
Sbjct: 364 LKIELMKSWELGHVITAIFEETVEHMLLQPTFITEYPAAVSPLARR-NDQNPDVTDRFEF 422
Query: 353 FIIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGC 412
FI G E+ANGFSELND E+Q+ RF+ Q+D K + E + +YD D++ ALE+G+PP +G
Sbjct: 423 FIGGRELANGFSELNDAEDQAERFQAQVDQKAAGDDE-AMFYDADFVTALEHGLPPTAGQ 481
Query: 413 GIGVDRLIMLLTNSKNIRDVILFPHLR 439
GIG+DRL+ML TNS IRDVILFP LR
Sbjct: 482 GIGIDRLVMLFTNSHTIRDVILFPALR 508
>gi|422009492|ref|ZP_16356475.1| lysyl-tRNA ligase [Providencia rettgeri Dmel1]
gi|414093310|gb|EKT54982.1| lysyl-tRNA ligase [Providencia rettgeri Dmel1]
Length = 505
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 226/440 (51%), Positives = 307/440 (69%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF LQD G +IQ+Y+S + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 74 MTRRIMGKASFATLQDVGG-----RIQIYVSRDDLAEGIYNEQFKKWDLGDILGAKGRLF 128
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGEL++ ++L+TK+LRPLP+KF LS+QE +YR RY+DLI N+ +R F R++
Sbjct: 129 KTKTGELTVHCHEVRLLTKALRPLPDKFHGLSDQETRYRQRYLDLIANDESRHTFIVRSK 188
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ +R+FM FMEVETP++ PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 189 ILAEVRNFMVSYGFMEVETPMMQVIPGGASARPFVTHHNALDIDMYLRIAPELYLKRLVV 248
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEG+SPRHNPEFTM+E Y AY +Y L+ TE + + + +G T
Sbjct: 249 GGFERVFEINRNFRNEGLSPRHNPEFTMMELYMAYADYRDLIALTEDLFRTLTQKVLGNT 308
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y + DF K F KLT+ EAI KY P+ N DL + + + I K + L
Sbjct: 309 VVQYGEQEFDFGKPFAKLTMKEAICKYRPETNVADLDDMDKAVAIAQSIGIKIEKSWGLG 368
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+Q +FEE E+ L PT+IT YP E+SPLAR+ N +N IT+RFE FI G EI
Sbjct: 369 R-----IQCEIFEEVAESHLIQPTFITEYPAEVSPLARR-NDDNPFITDRFEFFIGGREI 422
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF Q+ K+E + E + +YD DYI ALE+G+PP +G GIG+DR+
Sbjct: 423 GNGFSELNDAEDQAERFAEQVRQKDEGDDE-AMFYDEDYITALEHGLPPTAGLGIGIDRM 481
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP LR
Sbjct: 482 VMLFTNSHTIRDVILFPALR 501
>gi|325922146|ref|ZP_08183936.1| lysyl-tRNA synthetase (class II) [Xanthomonas gardneri ATCC 19865]
gi|325547381|gb|EGD18445.1| lysyl-tRNA synthetase (class II) [Xanthomonas gardneri ATCC 19865]
Length = 505
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 215/445 (48%), Positives = 310/445 (69%), Gaps = 21/445 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M KRVMGK SF +QD SG ++QL++ ++G + YT FK +D+GDI+ +G L +
Sbjct: 77 MAKRVMGKASFAQIQDESG-----RVQLFLQGNVLG-DAYTAFKGWDVGDIVAVEGGLTR 130
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+K ++L+L+TKSLRPLP+K+ LS+ E +YR RY+DLI+ R+VF KR++I
Sbjct: 131 TKTGELSVKATALRLLTKSLRPLPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFIKRSKI 190
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I ++R +++ F+EVETP++H PGGA AKPF THHN+L++ ++LR+APELYLKRL++G
Sbjct: 191 IRAMRAWLDARRFLEVETPMMHYIPGGATAKPFTTHHNALDLDLYLRVAPELYLKRLVVG 250
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G +++EIN+NFRNEG+S RHNPEFTM+E Y AY Y +M TE++I+ +GTT+
Sbjct: 251 GLERVYEINRNFRNEGVSTRHNPEFTMLELYEAYATYHEIMDLTEQVIRDTAQSVLGTTQ 310
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELK----KINPKFNQKK 296
+++ G +D + +F + + EA++ + P + D ++ L + K+ P + K
Sbjct: 311 VNWDGADIDLAPAFRRWRMDEAVRHHNPDISAADCTDRAALLGHCERLKIKVKPSYGWGK 370
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
+L L +FE T E L PT+IT++P E+SPLAR S+ E T+RFELFI G
Sbjct: 371 LL---------LEIFEATVEHTLVQPTFITDHPVEVSPLARSSDTE-PGYTDRFELFING 420
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELNDPE+Q+ RF+ Q+ K+ + E + +YD DYI ALEYGM P G GIG+
Sbjct: 421 KELANGFSELNDPEDQAARFQAQVQAKDGGDDE-AMHYDADYIRALEYGMAPTGGLGIGI 479
Query: 417 DRLIMLLTNSKNIRDVILFPHLRNE 441
DRL+MLLT S +IRDV+LFP++R E
Sbjct: 480 DRLVMLLTGSTSIRDVLLFPYMRPE 504
>gi|410088016|ref|ZP_11284715.1| Lysyl-tRNA synthetase (class II) [Morganella morganii SC01]
gi|421494496|ref|ZP_15941843.1| LYSS [Morganella morganii subsp. morganii KT]
gi|455740158|ref|YP_007506424.1| Lysyl-tRNA synthetase (class II) [Morganella morganii subsp.
morganii KT]
gi|400191235|gb|EJO24384.1| LYSS [Morganella morganii subsp. morganii KT]
gi|409765539|gb|EKN49646.1| Lysyl-tRNA synthetase (class II) [Morganella morganii SC01]
gi|455421721|gb|AGG32051.1| Lysyl-tRNA synthetase (class II) [Morganella morganii subsp.
morganii KT]
Length = 505
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 223/440 (50%), Positives = 308/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF LQDT+G +IQ+Y+S + + + +Y + FK +D+GDI+ A+G LF
Sbjct: 75 MTRRIMGKASFATLQDTAG-----RIQIYVSRDDLAEGVYNESFKKWDLGDILAARGKLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGEL++ + ++L+TK+LRPLP+KF LS+QE +YR RY+DLI N+ +R F R++
Sbjct: 130 KTKTGELTVHCTEVRLLTKALRPLPDKFHGLSDQETRYRQRYLDLIANDESRHTFAVRSR 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM FMEVETP++ PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAEIRKFMVNKGFMEVETPMMQVIPGGASARPFVTHHNALDIDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEG+SPRHNPEFTM+E Y AY +Y L+ TE++ + I D +G
Sbjct: 250 GGFERVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYKDLIVLTEELFRTIAQDVLGNP 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y + DF K F KLT+ EAI KY P+ N DL + + K +N K + L
Sbjct: 310 VVKYGDQEFDFGKPFAKLTMKEAICKYRPETNMADLDDMDKAVAIAKSLNIKIEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+Q +FEE E+ L PT+I YP E+SPLAR+ N +N IT+RFE FI G EI
Sbjct: 370 R-----VQCEIFEEVAESHLIQPTFIIEYPAEVSPLARR-NDDNPFITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF Q+ K+ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAERFAEQVRQKDAGDDE-AMFYDEDYVVALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML T+S IRDVILFP +R
Sbjct: 483 VMLFTDSHTIRDVILFPAMR 502
>gi|422013443|ref|ZP_16360069.1| lysyl-tRNA ligase [Providencia burhodogranariea DSM 19968]
gi|414103247|gb|EKT64826.1| lysyl-tRNA ligase [Providencia burhodogranariea DSM 19968]
Length = 505
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 225/440 (51%), Positives = 309/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF LQD G +IQ+Y+S + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 74 MTRRIMGKASFATLQDMGG-----RIQIYVSRDDLAEGIYNEQFKKWDLGDILGAKGRLF 128
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGEL++ ++L+TK+LRPLP+KF L++QE +YR RY+DLI N+ +R F R++
Sbjct: 129 KTKTGELTVHCHEVRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANDESRHTFMVRSK 188
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ +R+FM FMEVETP++ PGGA A+PFITHHN+L++ MFLRIAPELYLKRL++
Sbjct: 189 ILAELRNFMVGKGFMEVETPMMQVIPGGASARPFITHHNALDIDMFLRIAPELYLKRLVV 248
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEG+SPRHNPEFTM+E Y AY +Y L+ TE++ + + + +G T
Sbjct: 249 GGFERVFEINRNFRNEGLSPRHNPEFTMMELYMAYADYRDLIDLTEELFRTLAQEVLGNT 308
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y + DF K F KLT+ EAI KY P+ N DL + + + ++ K + L
Sbjct: 309 VVQYGEQEFDFGKPFTKLTMKEAICKYRPETNVSDLDDMDKAVAIAQSLSIKIEKSWGLG 368
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+Q +FEE E+ L PT+I YP E+SPLAR+ N +N IT+RFE FI G EI
Sbjct: 369 R-----IQCEIFEEVAESHLIQPTFIIEYPAEVSPLARR-NDDNPFITDRFEFFIGGREI 422
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF Q+ K+E + E + +YD DY+ ALE+GMPP +G GIG+DR+
Sbjct: 423 GNGFSELNDAEDQAERFAEQVRHKDEGDDE-AMFYDEDYVTALEHGMPPTAGLGIGIDRM 481
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP LR
Sbjct: 482 VMLFTNSHTIRDVILFPALR 501
>gi|88706909|ref|ZP_01104608.1| Lysyl-tRNA synthetase [Congregibacter litoralis KT71]
gi|88698831|gb|EAQ95951.1| Lysyl-tRNA synthetase [Congregibacter litoralis KT71]
Length = 499
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 208/432 (48%), Positives = 313/432 (72%), Gaps = 12/432 (2%)
Query: 10 SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTNTGELSIK 69
+F+++QD G+IQLY+ + + ++ K++D+GDI+ A+G L ++ G+L I
Sbjct: 80 AFLLIQD-----GEGQIQLYVDRKGLDEDTLAAIKSWDLGDIVAARGPLHRSGKGDLYIN 134
Query: 70 VSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIISSIRHFME 129
+ +L+TK+LRPLP+K+ L++QE++YR RY+DLI+NE++R VF+ R+++IS IR FM+
Sbjct: 135 MREARLLTKALRPLPDKYHGLADQELRYRQRYVDLIVNESSRDVFRTRSKVISYIRKFMD 194
Query: 130 KNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGFNKIFEIN 189
+FMEVETP++ PGGA AKPF+THHN+L++ M+LRIAPELYLKRL +GGF +++EIN
Sbjct: 195 AREFMEVETPMMQPIPGGAAAKPFVTHHNALDLTMYLRIAPELYLKRLTVGGFERVYEIN 254
Query: 190 KNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKIDYQGRLLD 249
+NFRNEG+S RHNPEFTM+E+Y AY +Y M TE M++ + + +GT ++ YQG++ D
Sbjct: 255 RNFRNEGLSTRHNPEFTMLEYYWAYADYRDAMDLTEAMLRGLTEEVLGTQQVTYQGQVFD 314
Query: 250 FSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNNLKKDILQLM 309
FSK F ++T+I+AI + P + D+ + K + + + + L +Q+
Sbjct: 315 FSKPFARMTVIDAILAHNPSLSAADIAERETAKGVAEGLGIEVSDAWGLGK-----IQIE 369
Query: 310 LFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIANGFSELNDP 369
+FE+T E +L PT+IT YPTE+SPLAR+ N E+ +T+RFE F+ G E+ANGFSELND
Sbjct: 370 IFEKTAEHRLEQPTFITAYPTEVSPLARR-NDEDPFVTDRFEFFVAGRELANGFSELNDA 428
Query: 370 EEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLIMLLTNSKNI 429
E+Q+ RF+ Q++ K+ E + ++D DY+ ALEYGMPP +G GIG+DRL+MLLT+S +I
Sbjct: 429 EDQAQRFQEQVEQKD-AGDEEAMHFDADYVRALEYGMPPTAGEGIGIDRLVMLLTDSPSI 487
Query: 430 RDVILFPHLRNE 441
RDV+LFPH+R E
Sbjct: 488 RDVLLFPHMRPE 499
>gi|87120695|ref|ZP_01076588.1| lysyl-tRNA synthetase [Marinomonas sp. MED121]
gi|86163923|gb|EAQ65195.1| lysyl-tRNA synthetase [Marinomonas sp. MED121]
Length = 499
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 222/438 (50%), Positives = 311/438 (71%), Gaps = 12/438 (2%)
Query: 5 VMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTNTG 64
V + +F++LQD SG +IQ Y++ + + L D K +D+GDIIG KG + K+ G
Sbjct: 74 VRNRGAFMLLQDMSG-----QIQAYVNRKALSPELLADQKTWDLGDIIGIKGPVHKSGKG 128
Query: 65 ELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIISSI 124
+L + + L+TK+LRPLP+K + L++ E +YR RY+DLI+NE +RK F+ R+QI+S+I
Sbjct: 129 DLYVDMQEAVLLTKALRPLPDKHKGLADMETRYRQRYVDLIVNEESRKTFQMRSQIVSTI 188
Query: 125 RHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGFNK 184
R F+E F EVETP++ PGGA A+PF+THHN+++M+MFLRIAPELYLKRL++GGF +
Sbjct: 189 RRFLEDRRFTEVETPMMQTIPGGASARPFVTHHNAMDMQMFLRIAPELYLKRLVVGGFER 248
Query: 185 IFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKIDYQ 244
+FEIN+NFRNEG+S RHNPEFTMIEFY AY +Y LM TE M++ + +GTTK+ YQ
Sbjct: 249 VFEINRNFRNEGVSTRHNPEFTMIEFYQAYADYKDLMDLTEDMLRDVAEKVLGTTKVTYQ 308
Query: 245 GRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNNLKKD 304
G DF F ++T++E+I + P+ E D+ KK+ Q K + L K
Sbjct: 309 GSEYDFGAPFIRMTMVESILHFNPELTEADISTLEAATEVAKKLG---IQVKPIWGLGK- 364
Query: 305 ILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIANGFS 364
LQ +FEET E+KL PT+IT YP E+SPLAR+ N +N IT+RFE F+ G EIANGFS
Sbjct: 365 -LQTEIFEETAESKLDQPTFITAYPAEVSPLARR-NDDNPFITDRFEFFVGGREIANGFS 422
Query: 365 ELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLIMLLT 424
ELNDPE+Q+ RF Q+ K+ + E + ++D DYI+ALE+G+PP +G GIG+DRL+ML T
Sbjct: 423 ELNDPEDQADRFNKQVAEKDAGDDE-AMHFDADYINALEHGLPPTAGEGIGIDRLVMLFT 481
Query: 425 NSKNIRDVILFPHLRNEN 442
++ +IRDVILFPH+R ++
Sbjct: 482 DAPSIRDVILFPHMRRQD 499
>gi|325916712|ref|ZP_08178969.1| lysyl-tRNA synthetase (class II) [Xanthomonas vesicatoria ATCC
35937]
gi|325537061|gb|EGD08800.1| lysyl-tRNA synthetase (class II) [Xanthomonas vesicatoria ATCC
35937]
Length = 505
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 214/445 (48%), Positives = 310/445 (69%), Gaps = 21/445 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M KRVMGK SF +QD SG ++QL++ ++G + YT FK +D+GDI+ +G L +
Sbjct: 77 MAKRVMGKASFAQIQDESG-----RVQLFLQGNVLG-DAYTAFKGWDVGDIVAVEGGLTR 130
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+K ++L+L+TKSLRPLP+K+ LS+ E +YR RY+DLI+ R+VF KR++I
Sbjct: 131 TKTGELSVKATALRLLTKSLRPLPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFIKRSKI 190
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I ++R +++ F+EVETP++H PGGA AKPF THHN+L++ ++LR+APELYLKRL++G
Sbjct: 191 IRAMRAWLDARRFLEVETPMMHYIPGGATAKPFTTHHNALDLDLYLRVAPELYLKRLVVG 250
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G +++EIN+NFRNEG+S RHNPEFTM+E Y AY Y +M TE++I+ +GTT+
Sbjct: 251 GLERVYEINRNFRNEGVSTRHNPEFTMLELYEAYATYHEIMDLTEQVIRDTAQSVLGTTQ 310
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKI----NPKFNQKK 296
+++ G +D + +F + + EA++ + P+ D ++ L +++ P + K
Sbjct: 311 VNWDGAAIDLAPAFRRWRMDEAVRHHNPEITAADCTDREALLRHCERLKIRTKPSYGWGK 370
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
+L L +FE T E L PT+IT++P E+SPLAR S+ E T+RFELFI G
Sbjct: 371 LL---------LEIFEATVEHTLVQPTFITDHPVEVSPLARSSDTE-PGYTDRFELFING 420
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELNDPE+Q+ RF+ Q+ K+ + E + +YD DYI ALEYGM P G GIG+
Sbjct: 421 KELANGFSELNDPEDQAARFQAQVQAKDGGDDE-AMHYDADYIRALEYGMAPTGGLGIGI 479
Query: 417 DRLIMLLTNSKNIRDVILFPHLRNE 441
DRL+MLLT S +IRDV+LFP++R E
Sbjct: 480 DRLVMLLTGSTSIRDVLLFPYMRPE 504
>gi|268591698|ref|ZP_06125919.1| lysine--tRNA ligase [Providencia rettgeri DSM 1131]
gi|291312657|gb|EFE53110.1| lysine--tRNA ligase [Providencia rettgeri DSM 1131]
Length = 505
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 224/440 (50%), Positives = 307/440 (69%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF LQD G +IQ+Y+S + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 74 MTRRIMGKASFATLQDVGG-----RIQIYVSRDDLAEGIYNEQFKKWDLGDILGAKGRLF 128
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGEL++ ++L+TK+LRPLP+KF LS+QE +YR RY+DLI N+ +R F R++
Sbjct: 129 KTKTGELTVHCHEVRLLTKALRPLPDKFHGLSDQETRYRQRYLDLIANDESRHTFIVRSK 188
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ +R+FM FMEVETP++ PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 189 ILAEVRNFMVSYGFMEVETPMMQVIPGGASARPFVTHHNALDIDMYLRIAPELYLKRLVV 248
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEG+SPRHNPEFTM+E Y AY +Y L+ TE + + + +G T
Sbjct: 249 GGFERVFEINRNFRNEGLSPRHNPEFTMMELYMAYADYRDLIALTEDLFRTLTQKVLGNT 308
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y + DF K F K+T+ EAI KY P+ N DL + + + I K + L
Sbjct: 309 VVQYGEQEFDFGKPFTKMTMKEAICKYRPETNVADLDDMDKAVAIAQSIGIKIEKSWGLG 368
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+Q +FEE E+ L PT+IT YP E+SPLAR+ N +N IT+RFE FI G EI
Sbjct: 369 R-----VQCEIFEEVAESHLIQPTFITEYPAEVSPLARR-NDDNPFITDRFEFFIGGREI 422
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF Q+ K+E + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 423 GNGFSELNDAEDQAERFAEQVRQKDEGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 481
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP LR
Sbjct: 482 VMLFTNSHTIRDVILFPALR 501
>gi|390992974|ref|ZP_10263180.1| lysyl-tRNA synthetase [Xanthomonas axonopodis pv. punicae str. LMG
859]
gi|418522792|ref|ZP_13088823.1| lysyl-tRNA synthetase [Xanthomonas axonopodis pv. malvacearum str.
GSPB2388]
gi|372552289|emb|CCF70155.1| lysyl-tRNA synthetase [Xanthomonas axonopodis pv. punicae str. LMG
859]
gi|410700782|gb|EKQ59324.1| lysyl-tRNA synthetase [Xanthomonas axonopodis pv. malvacearum str.
GSPB2388]
Length = 505
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 214/445 (48%), Positives = 310/445 (69%), Gaps = 21/445 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M KRVMGK SF +QD SG ++QL++ ++G + YT FK +D+GDI+ +G L +
Sbjct: 77 MAKRVMGKASFAQIQDESG-----RVQLFLQGNVLG-DAYTAFKGWDVGDIVAVEGGLTR 130
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+K S+L+L+TKSLRPLP+K+ LS+ E +YR RY+DLI+ R+VF KR++I
Sbjct: 131 TKTGELSVKASALRLLTKSLRPLPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFIKRSKI 190
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I ++R +++ F+EVETP++H PGGA AKPF THHN+L++ ++LR+APELYLKRL++G
Sbjct: 191 IRAMRAWLDARRFLEVETPMMHYIPGGATAKPFTTHHNALDLDLYLRVAPELYLKRLVVG 250
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G +++EIN+NFRNEG+S RHNPEFTM+E Y AY Y +M TE++I+ +GTT+
Sbjct: 251 GLERVYEINRNFRNEGVSTRHNPEFTMLELYEAYATYHQIMDLTEQVIRDTAQSVLGTTQ 310
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELK----KINPKFNQKK 296
+ + G +D + +F + + EA++ + P+ + D ++ L + ++ P + K
Sbjct: 311 VSWDGADIDLAPAFRRWRMDEAVRHHNPEISAADCTDREALLRHCERLKIRVKPSYGWGK 370
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
+L L +FE T E L PT+IT++P E+SPLAR S+ E T+RFELFI G
Sbjct: 371 LL---------LEIFEATVEHTLVQPTFITDHPVEVSPLARSSDTE-PGYTDRFELFING 420
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELNDPE+Q+ RF+ Q+ K+ + E + ++D DYI ALEYGM P G GIG+
Sbjct: 421 KELANGFSELNDPEDQAARFQAQVQAKDGGDDE-AMHFDADYIRALEYGMAPTGGLGIGI 479
Query: 417 DRLIMLLTNSKNIRDVILFPHLRNE 441
DRL+MLLT S +IRDV+LFP++R E
Sbjct: 480 DRLVMLLTGSTSIRDVLLFPYMRPE 504
>gi|21242620|ref|NP_642202.1| lysyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str. 306]
gi|381171599|ref|ZP_09880742.1| lysyl-tRNA synthetase [Xanthomonas citri pv. mangiferaeindicae LMG
941]
gi|39932221|sp|Q8PLC6.1|SYK_XANAC RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|21108084|gb|AAM36738.1| lysyl-tRNA synthetase heat inducible [Xanthomonas axonopodis pv.
citri str. 306]
gi|380687972|emb|CCG37229.1| lysyl-tRNA synthetase [Xanthomonas citri pv. mangiferaeindicae LMG
941]
Length = 505
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 214/445 (48%), Positives = 310/445 (69%), Gaps = 21/445 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M KRVMGK SF +QD SG ++QL++ ++G + YT FK +D+GDI+ +G L +
Sbjct: 77 MAKRVMGKASFAQIQDESG-----RVQLFLQGNVLG-DAYTAFKGWDVGDIVAVEGGLTR 130
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+K S+L+L+TKSLRPLP+K+ LS+ E +YR RY+DLI+ R+VF KR++I
Sbjct: 131 TKTGELSVKASALRLLTKSLRPLPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFIKRSKI 190
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I ++R +++ F+EVETP++H PGGA AKPF THHN+L++ ++LR+APELYLKRL++G
Sbjct: 191 IRAMRAWLDARRFLEVETPMMHYIPGGATAKPFTTHHNALDLDLYLRVAPELYLKRLVVG 250
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G +++EIN+NFRNEG+S RHNPEFTM+E Y AY Y +M TE++I+ +GTT+
Sbjct: 251 GLERVYEINRNFRNEGVSTRHNPEFTMLELYEAYATYHQIMDLTEQVIRDTAQSVLGTTQ 310
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELK----KINPKFNQKK 296
+ + G +D + +F + + EA++ + P+ + D ++ L + ++ P + K
Sbjct: 311 VSWDGADIDLAPAFRRWRMDEAVRHHNPEISAADCTDREALLRHCERLKIRVKPSYGWGK 370
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
+L L +FE T E L PT+IT++P E+SPLAR S+ E T+RFELFI G
Sbjct: 371 LL---------LEIFEATVEHTLVQPTFITDHPVEVSPLARSSDTE-PGYTDRFELFING 420
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELNDPE+Q+ RF+ Q+ K+ + E + ++D DYI ALEYGM P G GIG+
Sbjct: 421 KELANGFSELNDPEDQAARFQAQVQAKDGGDDE-AMHFDADYIRALEYGMAPTGGLGIGI 479
Query: 417 DRLIMLLTNSKNIRDVILFPHLRNE 441
DRL+MLLT S +IRDV+LFP++R E
Sbjct: 480 DRLVMLLTGSTSIRDVLLFPYMRPE 504
>gi|350421956|ref|XP_003493011.1| PREDICTED: lysyl-tRNA synthetase-like [Bombus impatiens]
Length = 507
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 227/440 (51%), Positives = 304/440 (69%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M++R+MGK SF+ LQD G IQLY++ + + + LY + FK +D+GDII AKG LF
Sbjct: 76 MMRRIMGKASFVSLQDVGG-----TIQLYVTRDDLPEGLYNEQFKKWDLGDIIAAKGYLF 130
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI ++L+TK+LRPLP+KF LS+QE +YR RY+DLI N +R F R++
Sbjct: 131 KTKTGELSIHCEEIRLLTKALRPLPDKFHGLSDQETRYRQRYLDLITNPTSRHTFAARSK 190
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+S IR FM + FMEVETP++ PGGA AKPFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 191 IVSEIRQFMTEQHFMEVETPMMQVIPGGASAKPFITHHNALDLDMYLRIAPELYLKRLVV 250
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGISPRHNPEFTM+E Y AY +Y L+ TE + +++ ++ G+
Sbjct: 251 GGFERVFEINRNFRNEGISPRHNPEFTMMEMYMAYADYKDLILLTESLFRRLAINVTGSA 310
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y DF K F K+T+ EAI Y P+ N DL + + K + + + L
Sbjct: 311 VVQYGEHSFDFGKPFIKMTMKEAICHYRPETNMADLDDFDKACAIAKAVGIEIEKGWGLG 370
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +I FEE E L PT+IT YP E+SPLAR+ N EN ++T+RFE FI G EI
Sbjct: 371 RVVTEI-----FEEVAEANLIQPTFITEYPAEVSPLARR-NDENPSVTDRFEFFIGGREI 424
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF Q+ K+ + E + ++D DY+ ALE+G+PP +G GIG+DR
Sbjct: 425 GNGFSELNDAEDQAERFAEQVRQKDAGDDE-AMFFDEDYVTALEHGLPPTAGLGIGIDRT 483
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP LR
Sbjct: 484 VMLFTNSHTIRDVILFPALR 503
>gi|188575994|ref|YP_001912923.1| lysyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
gi|238689562|sp|B2SV97.1|SYK_XANOP RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|188520446|gb|ACD58391.1| lysyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 505
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 214/445 (48%), Positives = 311/445 (69%), Gaps = 21/445 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M KRVMGK SF +QD SG ++QL++ ++G + YT FK +D+GDI+ +G L +
Sbjct: 77 MAKRVMGKASFAQIQDESG-----RVQLFLQGNVLG-DAYTAFKGWDVGDIVAVEGGLTR 130
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+K S+L+L+TKSLRPLP+K+ LS+ E +YR RY+DLI+ R+VF KR++I
Sbjct: 131 TKTGELSVKASALRLLTKSLRPLPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFIKRSKI 190
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I ++R +++ F+EVETP++H PGGA AKPF THHN+L++ ++LR+APELYLKRL++G
Sbjct: 191 IRAMRAWLDARRFLEVETPMMHYIPGGATAKPFTTHHNALDLDLYLRVAPELYLKRLVVG 250
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G +++EIN+NFRNEG+S RHNPEFTM+E Y AY Y +M TE++I+ +GTT+
Sbjct: 251 GLERVYEINRNFRNEGVSTRHNPEFTMLELYEAYATYHEIMDLTEQVIRDTAQSVLGTTQ 310
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELK----KINPKFNQKK 296
+ + G +D + +F + + EA++ + P+ + D ++ L + ++ P ++ K
Sbjct: 311 VSWDGADIDLAPAFRRWRMDEAVRHHNPEISAADCTDRDALLRHCERLKIRVKPSYDWGK 370
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
+L L +FE T E L PT+IT++P E+SPLAR S+ E T+RFELFI G
Sbjct: 371 LL---------LEIFEATVEHTLVQPTFITDHPVEVSPLARSSDTE-PGYTDRFELFING 420
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELNDPE+Q+ RF+ Q+ K+ + E + ++D DYI ALEYGM P G GIG+
Sbjct: 421 KELANGFSELNDPEDQAARFQAQVQAKDGGDDE-AMHFDADYIRALEYGMAPTGGLGIGI 479
Query: 417 DRLIMLLTNSKNIRDVILFPHLRNE 441
DRL+MLLT S +IRDV+LFP++R E
Sbjct: 480 DRLVMLLTGSTSIRDVLLFPYMRPE 504
>gi|294666712|ref|ZP_06731948.1| lysyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 10535]
gi|292603537|gb|EFF46952.1| lysyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 10535]
Length = 505
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 214/445 (48%), Positives = 310/445 (69%), Gaps = 21/445 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M KRVMGK SF +QD SG ++QL++ ++G + YT FK +D+GDI+ +G L +
Sbjct: 77 MAKRVMGKASFAQIQDESG-----RVQLFLQGNVLG-DAYTAFKGWDVGDIVAVEGGLTR 130
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+K S+L+L+TKSLRPLP+K+ LS+ E +YR RY+DLI+ R+VF KR++I
Sbjct: 131 TKTGELSVKASALRLLTKSLRPLPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFIKRSKI 190
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I ++R +++ F+EVETP++H PGGA AKPF THHN+L++ ++LR+APELYLKRL++G
Sbjct: 191 IRAMRAWLDARRFLEVETPMMHYIPGGATAKPFTTHHNALDLDLYLRVAPELYLKRLVVG 250
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G +++EIN+NFRNEG+S RHNPEFTM+E Y AY Y +M TE++I+ +GTT+
Sbjct: 251 GLERVYEINRNFRNEGVSTRHNPEFTMLELYEAYATYHQIMDLTEQVIRDTAQSVLGTTQ 310
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELK----KINPKFNQKK 296
+ + G +D + +F + + EA++ + P+ + D ++ L + ++ P + K
Sbjct: 311 VSWDGADIDLAPAFRRWRMDEAVRHHNPEISAADCTDREALLRHCERLKIRVKPSYGWGK 370
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
+L L +FE T E L PT+IT++P E+SPLAR S+ E T+RFELFI G
Sbjct: 371 LL---------LEIFEATVEHTLVQPTFITDHPVEVSPLARSSDTE-PGYTDRFELFING 420
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELNDPE+Q+ RF+ Q+ K+ + E + ++D DYI ALEYGM P G GIG+
Sbjct: 421 KELANGFSELNDPEDQAARFQAQVQAKDGGDDE-AMHFDADYIRALEYGMAPTGGLGIGI 479
Query: 417 DRLIMLLTNSKNIRDVILFPHLRNE 441
DRL+MLLT S +IRDV+LFP++R E
Sbjct: 480 DRLVMLLTGSTSIRDVLLFPYMRPE 504
>gi|294624918|ref|ZP_06703573.1| lysyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 11122]
gi|292600797|gb|EFF44879.1| lysyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 11122]
Length = 505
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 214/445 (48%), Positives = 310/445 (69%), Gaps = 21/445 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M KRVMGK SF +QD SG ++QL++ ++G + YT FK +D+GDI+ +G L +
Sbjct: 77 MAKRVMGKASFAQIQDESG-----RVQLFLQGNVLG-DAYTAFKGWDVGDIVAVEGGLTR 130
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+K S+L+L+TKSLRPLP+K+ LS+ E +YR RY+DLI+ R+VF KR++I
Sbjct: 131 TKTGELSVKASALRLLTKSLRPLPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFIKRSKI 190
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I ++R +++ F+EVETP++H PGGA AKPF THHN+L++ ++LR+APELYLKRL++G
Sbjct: 191 IRAMRAWLDARRFLEVETPMMHYIPGGATAKPFTTHHNALDLDLYLRVAPELYLKRLVVG 250
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G +++EIN+NFRNEG+S RHNPEFTM+E Y AY Y +M TE++I+ +GTT+
Sbjct: 251 GLERVYEINRNFRNEGVSTRHNPEFTMLELYEAYATYHQIMDLTEQVIRDTAQSVLGTTQ 310
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELK----KINPKFNQKK 296
+ + G +D + +F + + EA++ + P+ + D ++ L + ++ P + K
Sbjct: 311 VSWDGADIDLAPAFRRWRMDEAVRHHNPEISAADCTDREALLRHCERLKIRVKPSYGWGK 370
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
+L L +FE T E L PT+IT++P E+SPLAR S+ E T+RFELFI G
Sbjct: 371 LL---------LEIFEATVEHTLVQPTFITDHPVEVSPLARSSDTE-PGYTDRFELFING 420
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELNDPE+Q+ RF+ Q+ K+ + E + ++D DYI ALEYGM P G GIG+
Sbjct: 421 KELANGFSELNDPEDQAARFQAQVQAKDGGDDE-AMHFDADYIRALEYGMAPTGGLGIGI 479
Query: 417 DRLIMLLTNSKNIRDVILFPHLRNE 441
DRL+MLLT S +IRDV+LFP++R E
Sbjct: 480 DRLVMLLTGSTSIRDVLLFPYMRPE 504
>gi|357417570|ref|YP_004930590.1| lysyl-tRNA synthetase [Pseudoxanthomonas spadix BD-a59]
gi|355335148|gb|AER56549.1| lysyl-tRNA synthetase [Pseudoxanthomonas spadix BD-a59]
Length = 502
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 215/445 (48%), Positives = 307/445 (68%), Gaps = 21/445 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M KRVMGK SF +QD SG +IQL++ ++G+ Y FK +D+GDI+G +GTL +
Sbjct: 72 MAKRVMGKASFAQIQDQSG-----RIQLFLQGNVLGER-YEAFKGWDVGDIVGVEGTLTR 125
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+K ++L+L+TKSLRPLP+K+ LS+ E +YR RY+DLI+ R+VF KR++I
Sbjct: 126 TRTGELSVKATTLRLLTKSLRPLPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFIKRSRI 185
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I +IR +++ F+EVETP++H PGGA A+PF THHN+L + ++LR+APELYLKRL++G
Sbjct: 186 IRAIRAWLDARGFLEVETPMMHYIPGGATARPFTTHHNALGLDLYLRVAPELYLKRLVVG 245
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G +++EIN+NFRNEG+S RHNPEFTM+E Y AY Y +M TE +I+ + +GTT+
Sbjct: 246 GLERVYEINRNFRNEGVSTRHNPEFTMLELYEAYATYHEIMDLTENLIRDVAQSVLGTTQ 305
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELK----KINPKFNQKK 296
+ ++G +D + F + + +A++ + P D ++ L + K+ P + +
Sbjct: 306 VRWEGADIDLGQPFRRWRMDQAVRHHNPGITVADCTDRQALAGHCERLQIKVKPSYGWGR 365
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
+L L +FE T E L PT+IT YP E+SPLAR S+ E T+RFELFI G
Sbjct: 366 LL---------LEIFEATVEHTLVEPTFITGYPLEVSPLARASDTE-AGYTDRFELFING 415
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
EIANGFSELNDPE+Q+ RF+ Q++ K + E + ++D DYI ALEYGM P G GIG+
Sbjct: 416 KEIANGFSELNDPEDQAARFRAQVEAKEGGDDE-AMHFDADYIRALEYGMSPTGGLGIGI 474
Query: 417 DRLIMLLTNSKNIRDVILFPHLRNE 441
DRL+MLLT + +IRDV+LFP++R E
Sbjct: 475 DRLVMLLTGADSIRDVLLFPYMRPE 499
>gi|404398355|ref|ZP_10989939.1| lysyl-tRNA ligase [Pseudomonas fuscovaginae UPB0736]
Length = 500
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 222/441 (50%), Positives = 315/441 (71%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD SG +IQ+Y++ + + + K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMSG-----RIQVYVNRKTLSEETLAAVKTWDLGDIISAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L ++++ ++L+TKSLRPLP+K L++ E +YR RY+DLI+NE+TR+ F+ R+
Sbjct: 124 ARSGKGDLYVEMTDVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEDTRQTFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR FM K DFMEVETP+L PGGA AKPF THHN+L+M M+LRIAPELYLKRL+
Sbjct: 184 QVIAHIRSFMMKRDFMEVETPMLQTIPGGAAAKPFETHHNALDMGMYLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF ++FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 244 VGGFERVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQAVLGS 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY PQ E DL + + KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPQLTEADLLDVDKAREIAKKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
+ LQ+M+FEE E KL P +IT YP E+SPLAR+ N +N N+T+RFELFI G E
Sbjct: 359 GHEGLGKLQVMIFEELVEHKLEQPHFITEYPFEVSPLARR-NDKNPNVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RFK Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFKAQVAEKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTN+ +IRDVILFPH+R
Sbjct: 477 LVMLLTNAPSIRDVILFPHMR 497
>gi|117924339|ref|YP_864956.1| lysyl-tRNA synthetase [Magnetococcus marinus MC-1]
gi|226737093|sp|A0L6F7.1|SYK_MAGSM RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|117608095|gb|ABK43550.1| lysyl-tRNA synthetase [Magnetococcus marinus MC-1]
Length = 501
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 220/444 (49%), Positives = 313/444 (70%), Gaps = 15/444 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLY-TDFKNYDIGDIIGAKGTLF 59
ML R GK++F LQD SG ++Q+ +++G LY T F+ ++GDI+G +G LF
Sbjct: 71 MLLRNFGKLTFATLQDESG-----RLQISAQRDVVGAELYSTVFRKIEVGDILGVEGHLF 125
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
+T GEL+++V +L++K++RPLP KF L + E +YR RY+DLI+N R++FK R++
Sbjct: 126 RTKVGELTVQVERFELLSKAVRPLPEKFHGLEDVETRYRQRYVDLIVNTEVREIFKTRSR 185
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+IS IR FME F+EVETP++H PGGA A+PF+THHN+L+ ++LRIAPELYLKRLI+
Sbjct: 186 VISRIRQFMEHRGFLEVETPMMHPIPGGATARPFVTHHNALDTDLYLRIAPELYLKRLIV 245
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDC-IGT 238
GGF ++FEIN+NFRNEG+SPRHNPEFTM+EFY AYT+Y LM FTE +++ ++ D G
Sbjct: 246 GGFERVFEINRNFRNEGLSPRHNPEFTMMEFYQAYTDYRELMDFTEALVQDVVKDVNEGE 305
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
+ YQG+ LDFS + +LT EAI +Y + + + + +L+S + + K
Sbjct: 306 LTVAYQGQELDFSGPWARLTPAEAIVRYM-EADAARITERGYLESLAESLGIKAE----- 359
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
+ +L L +FEE E KL PT+I +YP +SPL+R+S+ +N +I ERFELFI G E
Sbjct: 360 TSWDDGMLLLTIFEEGVEHKLMAPTFIIDYPISVSPLSRRSD-DNPDIAERFELFIAGRE 418
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN FSELNDP +Q+ RF+ Q++ K+ N E + ++D DYI ALEYGMPP G GIG+DR
Sbjct: 419 IANAFSELNDPADQASRFQKQVEAKDAGNEE-AMHFDADYIRALEYGMPPTGGEGIGIDR 477
Query: 419 LIMLLTNSKNIRDVILFPHLRNEN 442
L+MLLT++ NIR+V+LFP ++ E
Sbjct: 478 LVMLLTDAANIREVLLFPQMKREG 501
>gi|418517898|ref|ZP_13084054.1| lysyl-tRNA synthetase [Xanthomonas axonopodis pv. malvacearum str.
GSPB1386]
gi|410705369|gb|EKQ63843.1| lysyl-tRNA synthetase [Xanthomonas axonopodis pv. malvacearum str.
GSPB1386]
Length = 505
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 214/445 (48%), Positives = 310/445 (69%), Gaps = 21/445 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M KRVMGK SF +QD SG ++QL++ ++G + YT FK +D+GDI+ +G L +
Sbjct: 77 MAKRVMGKASFAQIQDESG-----RVQLFLQGNVLG-DAYTAFKGWDVGDIVAVEGGLTR 130
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+K S+L+L+TKSLRPLP+K+ LS+ E +YR RY+DLI+ R+VF KR++I
Sbjct: 131 TKTGELSVKASALRLLTKSLRPLPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFIKRSKI 190
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I ++R +++ F+EVETP++H PGGA AKPF THHN+L++ ++LR+APELYLKRL++G
Sbjct: 191 IRAMRAWLDARRFLEVETPMMHYIPGGATAKPFTTHHNALDLDLYLRVAPELYLKRLVVG 250
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G +++EIN+NFRNEG+S RHNPEFTM+E Y AY Y +M TE++I+ +GTT+
Sbjct: 251 GLERVYEINRNFRNEGVSTRHNPEFTMLELYEAYATYHQIMDLTEQVIRDSAQSVLGTTQ 310
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELK----KINPKFNQKK 296
+ + G +D + +F + + EA++ + P+ + D ++ L + ++ P + K
Sbjct: 311 VSWDGADIDLAPAFRRWRMDEAVRHHNPEISAADCTDREALLRHCERLKIRVKPSYGWGK 370
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
+L L +FE T E L PT+IT++P E+SPLAR S+ E T+RFELFI G
Sbjct: 371 LL---------LEIFEATVEHTLVQPTFITDHPVEVSPLARSSDTE-PGYTDRFELFING 420
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELNDPE+Q+ RF+ Q+ K+ + E + ++D DYI ALEYGM P G GIG+
Sbjct: 421 KELANGFSELNDPEDQAARFQAQVQAKDGGDDE-AMHFDADYIRALEYGMAPTGGLGIGI 479
Query: 417 DRLIMLLTNSKNIRDVILFPHLRNE 441
DRL+MLLT S +IRDV+LFP++R E
Sbjct: 480 DRLVMLLTGSTSIRDVLLFPYMRPE 504
>gi|384419207|ref|YP_005628567.1| lysyl-tRNA synthetase [Xanthomonas oryzae pv. oryzicola BLS256]
gi|353462120|gb|AEQ96399.1| lysyl-tRNA synthetase [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 505
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 214/445 (48%), Positives = 310/445 (69%), Gaps = 21/445 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M KRVMGK SF +QD SG ++QL++ ++G + YT FK +D+GDI+ +G L +
Sbjct: 77 MAKRVMGKASFAQIQDESG-----RVQLFLQGNVLG-DAYTAFKGWDVGDIVAVEGGLTR 130
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+K S+L+L+TKSLRPLP+K+ LS+ E +YR RY+DLI+ R+VF KR++I
Sbjct: 131 TKTGELSVKASALRLLTKSLRPLPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFIKRSKI 190
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I ++R +++ F+EVETP++H PGGA AKPF THHN+L++ ++LR+APELYLKRL++G
Sbjct: 191 IRAMRAWLDARRFLEVETPMMHYIPGGATAKPFTTHHNALDLDLYLRVAPELYLKRLVVG 250
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G +++EIN+NFRNEG+S RHNPEFTM+E Y AY Y +M TE++I+ +GTT+
Sbjct: 251 GLERVYEINRNFRNEGVSTRHNPEFTMLELYEAYATYHEIMDLTEQVIRDTAQSVLGTTQ 310
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELK----KINPKFNQKK 296
+ + G +D + +F + + EA++ + P+ + D ++ L + ++ P + K
Sbjct: 311 VSWDGADIDLAPAFRRWRMDEAVRHHNPEISAADCTDRDALLRHCERLKIRVKPSYGWGK 370
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
+L L +FE T E L PT+IT++P E+SPLAR S+ E T+RFELFI G
Sbjct: 371 LL---------LEIFEATVEHTLVQPTFITDHPVEVSPLARSSDTE-PGYTDRFELFING 420
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELNDPE+Q+ RF+ Q+ K+ + E + ++D DYI ALEYGM P G GIG+
Sbjct: 421 KELANGFSELNDPEDQAARFQAQVQAKDGGDDE-AMHFDADYIRALEYGMAPTGGLGIGI 479
Query: 417 DRLIMLLTNSKNIRDVILFPHLRNE 441
DRL+MLLT S +IRDV+LFP++R E
Sbjct: 480 DRLVMLLTGSTSIRDVLLFPYMRPE 504
>gi|389793645|ref|ZP_10196806.1| lysyl-tRNA ligase [Rhodanobacter fulvus Jip2]
gi|388433278|gb|EIL90244.1| lysyl-tRNA ligase [Rhodanobacter fulvus Jip2]
Length = 515
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 213/447 (47%), Positives = 316/447 (70%), Gaps = 23/447 (5%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
+LKR GK+SF+ +QD +G +IQL++ ++G+ Y FK +D+GDI+GA+G L +
Sbjct: 85 LLKRGQGKVSFVQMQDQTG-----RIQLFVHQGMLGEA-YEAFKGWDVGDIVGAEGLLMR 138
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS++V L+L+TKSLRPLP+KF L++ E +YR RY+DLI+ E R+ F R++I
Sbjct: 139 TKTGELSVRVDQLRLLTKSLRPLPDKFHGLADVEQRYRQRYVDLIVTEEARRTFMLRSKI 198
Query: 121 ISSIRHFMEK--NDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
I S+R ++E FMEVETP++H PGGA A+PF THHN+L++ ++LR+APELYLKRL+
Sbjct: 199 IGSMRQWLEAPTRRFMEVETPMMHMIPGGATARPFTTHHNALDLDLYLRVAPELYLKRLV 258
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF++++EIN+NFRNEG+S RHNPEFTM+E Y AY Y +M TE +I+ I +GT
Sbjct: 259 VGGFDRVYEINRNFRNEGVSTRHNPEFTMLELYQAYATYHEIMDLTEGLIRDIAQSVLGT 318
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKIN----PKFNQ 294
T + + G +D +F + + +A+ + PQ +L+++ + + +++ P +
Sbjct: 319 TALTWDGADIDVGPAFRRWRMEDAVLELNPQIKREELRDREAMAAHARRVGVQVKPGYGW 378
Query: 295 KKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFI 354
K+L L +FE+T E L PT+IT++P E+SPLAR+S+ + IT+RFELF+
Sbjct: 379 GKLL---------LEIFEKTVEHTLIQPTFITDHPVEVSPLARESDT-DKGITDRFELFV 428
Query: 355 IGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGI 414
G E+ANGFSELNDPE+Q+ RF+ Q+D K+ + E + ++D DYI ALE G+PP G GI
Sbjct: 429 NGKELANGFSELNDPEDQAARFQAQVDAKDAGDDE-AMHFDADYIRALEVGLPPTGGLGI 487
Query: 415 GVDRLIMLLTNSKNIRDVILFPHLRNE 441
G+DRL+MLLT+S +IRDV+LFP++R E
Sbjct: 488 GIDRLVMLLTDSASIRDVLLFPYMRPE 514
>gi|375335764|ref|ZP_09777108.1| lysyl-tRNA synthetase [Succinivibrionaceae bacterium WG-1]
Length = 506
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 229/446 (51%), Positives = 319/446 (71%), Gaps = 18/446 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF LQD G +IQ+Y++ + + + +Y + FK D+GDI+G +G +F
Sbjct: 72 MTRRIMGKASFATLQDVGG-----RIQIYVTRDDLPEGVYQEEFKKLDLGDILGCEGYVF 126
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELS+ V+SL+L+TK+LRPLP K++ L +QE + R RY+DLI NE++R+ F R++
Sbjct: 127 KTKTGELSVHVTSLRLLTKALRPLPEKYKGLVDQEARCRQRYLDLIANESSRRTFIIRSK 186
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+IS IR +M ++ FMEVETP++ PGGA AKPFITHHN+L+M M+LRIAPEL+LKRL++
Sbjct: 187 VISGIRKYMTEHGFMEVETPMMQPIPGGASAKPFITHHNALDMDMYLRIAPELFLKRLVV 246
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEGI RHNPEFTM+EFY AY +Y L+ FTE + K + ++ +GTT
Sbjct: 247 GGFERVFELNRNFRNEGIDVRHNPEFTMMEFYMAYADYNDLINFTEDLFKTLALEVLGTT 306
Query: 240 KIDY-----QGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQ 294
KI Y +G LDF++ F++LT+ EAI KY P + DL++ + KK++
Sbjct: 307 KIHYAKEGEEGIQLDFAQPFDRLTMKEAILKYAPWIQKEDLEDYDRALAVAKKLHI---- 362
Query: 295 KKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFI 354
+IL+ K L +FEET E+KL PT+IT YP EISPLAR+ N +N + T+RFE FI
Sbjct: 363 -EILSAWKLGHLISAIFEETAESKLIQPTFITEYPFEISPLARR-NDKNPDFTDRFEFFI 420
Query: 355 IGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGI 414
G E+ N FSELND E+Q+ RF+ Q++ K E + + YYD D++ ALE+G+PP +G GI
Sbjct: 421 AGRELGNAFSELNDAEDQAARFRAQVEQK-EAGDDEAMYYDADFVTALEHGLPPTAGEGI 479
Query: 415 GVDRLIMLLTNSKNIRDVILFPHLRN 440
G+DRL+ML N IRDVILFP LR
Sbjct: 480 GIDRLVMLFANCHTIRDVILFPTLRQ 505
>gi|322418264|ref|YP_004197487.1| lysyl-tRNA synthetase [Geobacter sp. M18]
gi|320124651|gb|ADW12211.1| lysyl-tRNA synthetase [Geobacter sp. M18]
Length = 492
Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust.
Identities = 228/446 (51%), Positives = 314/446 (70%), Gaps = 21/446 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
+++R GK +F+ +QD G++QLY+ + +G+ L+ +F+NYDIGDIIGA GT F+
Sbjct: 63 IMRRSFGKAAFVQVQD-----RKGRMQLYMKKDTLGEELFAEFENYDIGDIIGATGTPFR 117
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+ VSS++L+TKSL PLP KF L++ E +YR RY+DLI++ R+VF KR++I
Sbjct: 118 TKTGELSLAVSSVRLLTKSLLPLPEKFHGLTDVETRYRQRYVDLIVSPEVREVFYKRSRI 177
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+ IR FM + DF+EVETP++ PGGA AKPF+THHN+L+M++FLRIAPELYLKRL++G
Sbjct: 178 VQLIREFMTRKDFLEVETPMMQQIPGGATAKPFVTHHNALDMELFLRIAPELYLKRLVVG 237
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEGIS RHNPEFTM+EFY AY + LM FTE+++ + + +GT
Sbjct: 238 GFERVFEINRNFRNEGISVRHNPEFTMMEFYQAYATFEDLMNFTEELLCHVTQELLGTLD 297
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
Y G + F + +++ T+ EAI +Y +ID ++ E + + + Q KI
Sbjct: 298 FTYGGEPISFQRPWKRFTVKEAIL----EYGDIDAKS-----LEDRDLAYAYAQ-KIGLE 347
Query: 301 LKKDI----LQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L +DI L +FEE E KL PT+ITNYPTE+SPL+RKS+ + +RFE F G
Sbjct: 348 LPEDIGYGKLITEIFEEVAEAKLIQPTFITNYPTEVSPLSRKSD-HDPEYVDRFEFFCAG 406
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+AN FSELNDP +Q RF Q+ K++ + E + Y D DYI ALEYG+PP +G GIG+
Sbjct: 407 REMANAFSELNDPRDQKERFLAQVAAKDKGDEE-AHYMDEDYIRALEYGLPPTAGEGIGI 465
Query: 417 DRLIMLLTNSKNIRDVILFPHLRNEN 442
DRL+MLLT+S +IRDVILFP LR E
Sbjct: 466 DRLVMLLTDSPSIRDVILFPQLRKEG 491
>gi|183599837|ref|ZP_02961330.1| hypothetical protein PROSTU_03354 [Providencia stuartii ATCC 25827]
gi|386742103|ref|YP_006215282.1| lysyl-tRNA synthetase [Providencia stuartii MRSN 2154]
gi|188022109|gb|EDU60149.1| lysine--tRNA ligase [Providencia stuartii ATCC 25827]
gi|384478796|gb|AFH92591.1| lysyl-tRNA synthetase [Providencia stuartii MRSN 2154]
Length = 506
Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust.
Identities = 223/440 (50%), Positives = 309/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF LQD G +IQ+Y+S + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 75 MTRRIMGKASFATLQDVGG-----RIQIYVSRDDLAEGVYNEQFKKWDLGDILGAKGRLF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGEL++ ++L+TK+LRPLP+KF L++QE +YR RY+DLI N+ +R F R++
Sbjct: 130 KTKTGELTVHCHEVRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANDESRHTFMVRSK 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ +R+FM FMEVETP++ PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 ILAELRNFMVGKGFMEVETPMMQVIPGGASARPFVTHHNALDIDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEG+SPRHNPEFTM+E Y AY +Y L+ TE++ + + + +G T
Sbjct: 250 GGFERVFEINRNFRNEGLSPRHNPEFTMMELYMAYADYRDLIDLTEELFRTLAQNVLGNT 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y + DF K F KLT+ EAI KY P+ N DL + + + I K+ N
Sbjct: 310 VVKYGEQEFDFGKPFAKLTMKEAICKYRPETNVADLDDMDKAVAIAQSIG-----IKVEN 364
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ +Q +FEE E+ L PT+I YP E+SPLAR+ N EN IT+RFE FI G EI
Sbjct: 365 SWGLGRVQCEIFEEVAESHLIQPTFIIEYPAEVSPLARR-NDENPFITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF Q+ K+E + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAERFAEQVRQKDEGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML T+S IRDVILFP LR
Sbjct: 483 VMLFTDSHTIRDVILFPALR 502
>gi|167626876|ref|YP_001677376.1| lysyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia
ATCC 25017]
gi|167596877|gb|ABZ86875.1| lysyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia
ATCC 25017]
Length = 560
Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust.
Identities = 225/442 (50%), Positives = 316/442 (71%), Gaps = 13/442 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNY-DIGDIIGAKGTLF 59
+L+RVMGK SFI LQD SG +IQ+Y+ + + Y FKN D+GDI+G GT+F
Sbjct: 131 VLRRVMGKASFITLQDYSG-----RIQVYLKKSDLPEGQYETFKNLCDLGDIVGITGTMF 185
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KTNTGELS++ S +++TK++RPLP+KF L++QE++YR RY+DLI NE R+VFK R++
Sbjct: 186 KTNTGELSVEASHFEILTKAIRPLPDKFHGLADQEMRYRQRYVDLITNEKAREVFKVRSK 245
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
++S IR++ +K DFMEVETP++H GGA AKPF THHN+L+M ++LRIAPELYLKRL++
Sbjct: 246 VVSFIRNYFDKLDFMEVETPMMHVLQGGAAAKPFKTHHNALDMPLYLRIAPELYLKRLVV 305
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF +++EIN+NFRNEG+S RHNPEFTM+EFY AY +Y LM TE M+ K++ + IG+
Sbjct: 306 GGFERVYEINRNFRNEGVSSRHNPEFTMLEFYMAYADYNDLMDLTENMLSKLVQEVIGSE 365
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++Y ++F +E+++++++I KY + DL K+ +K+ K L
Sbjct: 366 ILEYGEYKINFGGKYERISMVDSIVKYNDDITKEDLATFESAKALAEKLKIKVEAYHELG 425
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+L +I FEET E +L PT+IT+YP +SPLAR+ + N T+RFE F+ EI
Sbjct: 426 HLINEI-----FEETVEHQLIQPTFITDYPAVVSPLARRQD-GNPEFTDRFEFFVGAREI 479
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
ANGFSELND E+Q+ RF+ Q++ + E + YD DYI ALEYGMPP +G GIG+DRL
Sbjct: 480 ANGFSELNDAEDQAERFRKQVEAAASGDDE-AMPYDKDYIRALEYGMPPTAGQGIGIDRL 538
Query: 420 IMLLTNSKNIRDVILFPHLRNE 441
+M LTNS++IRDVILFPH++ E
Sbjct: 539 VMYLTNSQSIRDVILFPHMKRE 560
>gi|114320955|ref|YP_742638.1| lysyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
gi|114227349|gb|ABI57148.1| lysyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
Length = 499
Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust.
Identities = 216/442 (48%), Positives = 312/442 (70%), Gaps = 12/442 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M KRVMGK SF LQD SG +IQL+++ + + + +Y FK +D+GDIIGA GTLF+
Sbjct: 68 MAKRVMGKASFTHLQDQSG-----RIQLFLARDELPEGVYQQFKGWDVGDIIGAAGTLFR 122
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T GELS+KV L+L+TKSLRPLP K+ L++ E +YR RY+DLI+N+++R+VF R+++
Sbjct: 123 TRKGELSVKVDELRLLTKSLRPLPEKYHGLTDTEARYRQRYVDLIMNDDSRRVFMLRSRL 182
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
++ IR F+ F+EVETP++ PGGA A+PF+THHN+L ++LR+APELYLKRL++G
Sbjct: 183 VAGIRDFLNGRGFLEVETPMMQPIPGGATARPFVTHHNALGADLYLRVAPELYLKRLVVG 242
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF +++EIN+NFRNEG+S RHNPEFTM+EFY AY ++ LM TE M++++ + +GTT+
Sbjct: 243 GFEQVYEINRNFRNEGVSTRHNPEFTMLEFYQAYADHNDLMDLTEAMLRRLAEEQLGTTQ 302
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQG DF + F ++ +++AI ++ P L ++ + +N + L
Sbjct: 303 ITYQGETFDFGRPFRRIRMVDAICEFNPDIGPEALTDRDSALNLAGHLNIPLMGHEGLGK 362
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQ+++FE TTE KL PT++T+YP E+SPLAR + ++ TERFEL + G EIA
Sbjct: 363 -----LQMVIFETTTEHKLREPTFVTHYPKEVSPLARPVD-DDPFYTERFELIVGGREIA 416
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RF+ Q K + E + +YD D+I ALEYG+PP +G GIG+DRL+
Sbjct: 417 NGFSELNDAEDQAERFRAQAAEKAAGDDE-AMHYDADFIRALEYGLPPTAGEGIGIDRLV 475
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
ML ++ +IRDV+LFP +R E
Sbjct: 476 MLFADAPSIRDVLLFPAMRPET 497
>gi|289663373|ref|ZP_06484954.1| lysyl-tRNA synthetase [Xanthomonas campestris pv. vasculorum NCPPB
702]
gi|289668829|ref|ZP_06489904.1| lysyl-tRNA synthetase [Xanthomonas campestris pv. musacearum NCPPB
4381]
Length = 505
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 214/445 (48%), Positives = 310/445 (69%), Gaps = 21/445 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M KRVMGK SF +QD SG ++QL++ ++G + YT FK +D+GDI+ +G L +
Sbjct: 77 MAKRVMGKASFAQIQDESG-----RVQLFLQGNVLG-DAYTAFKGWDVGDIVAVEGWLTR 130
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+K S+L+L+TKSLRPLP+K+ LS+ E +YR RY+DLI+ R+VF KR++I
Sbjct: 131 TKTGELSVKASALRLLTKSLRPLPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFIKRSKI 190
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I ++R +++ F+EVETP++H PGGA AKPF THHN+L++ ++LR+APELYLKRL++G
Sbjct: 191 IRAMRAWLDARRFLEVETPMMHYIPGGATAKPFTTHHNALDLDLYLRVAPELYLKRLVVG 250
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G +++EIN+NFRNEG+S RHNPEFTM+E Y AY Y +M TE++I+ +GTT+
Sbjct: 251 GLERVYEINRNFRNEGVSTRHNPEFTMLELYEAYATYHEIMDLTEQVIRDTAQSVLGTTQ 310
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELK----KINPKFNQKK 296
+ + G +D + +F + + EA++ + P+ + D ++ L + ++ P + K
Sbjct: 311 VSWDGADIDLAPAFRRWRMDEAVRHHNPEISAADCTDRDALLRHCERLKIRVKPSYGWGK 370
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
+L L +FE T E L PT+IT++P E+SPLAR S+ E T+RFELFI G
Sbjct: 371 LL---------LEIFEATVEHTLVQPTFITDHPVEVSPLARSSDTE-PGYTDRFELFING 420
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELNDPE+Q+ RF+ Q+ K+ + E + ++D DYI ALEYGM P G GIG+
Sbjct: 421 KELANGFSELNDPEDQAARFQAQVQAKDGGDDE-AMHFDADYIRALEYGMAPTGGLGIGI 479
Query: 417 DRLIMLLTNSKNIRDVILFPHLRNE 441
DRL+MLLT S +IRDV+LFP++R E
Sbjct: 480 DRLVMLLTGSTSIRDVLLFPYMRPE 504
>gi|254876004|ref|ZP_05248714.1| lysyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia
ATCC 25015]
gi|254842025|gb|EET20439.1| lysyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia
ATCC 25015]
Length = 560
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/442 (50%), Positives = 316/442 (71%), Gaps = 13/442 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNY-DIGDIIGAKGTLF 59
+L+RVMGK SFI LQD SG +IQ+Y+ + + Y FKN D+GDI+G GT+F
Sbjct: 131 VLRRVMGKASFITLQDYSG-----RIQVYLKKSDLPEGQYETFKNLCDLGDIVGITGTMF 185
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KTNTGELS++ S +++TK++RPLP+KF L++QE++YR RY+DLI NE R+VFK R++
Sbjct: 186 KTNTGELSVEASHFEILTKAIRPLPDKFHGLADQEMRYRQRYVDLITNEKAREVFKVRSK 245
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
++S IR++ +K DFMEVETP++H GGA AKPF THHN+L+M ++LRIAPELYLKRL++
Sbjct: 246 VVSFIRNYFDKLDFMEVETPMMHVLQGGAAAKPFKTHHNALDMPLYLRIAPELYLKRLVV 305
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF +++EIN+NFRNEG+S RHNPEFTM+EFY AY +Y LM TE M+ K++ + IG+
Sbjct: 306 GGFERVYEINRNFRNEGVSSRHNPEFTMLEFYMAYADYNDLMDLTEDMLSKLVQEVIGSE 365
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++Y ++F +E+++++++I KY + DL K+ +K+ K L
Sbjct: 366 ILEYGEYKINFGGKYERISMVDSIVKYNDDITKEDLATFESAKALAEKLKIKVEAYHELG 425
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+L +I FEET E +L PT+IT+YP +SPLAR+ + N T+RFE F+ EI
Sbjct: 426 HLINEI-----FEETVEHQLIQPTFITDYPAVVSPLARRQD-GNPEFTDRFEFFVGAREI 479
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
ANGFSELND E+Q+ RF+ Q++ + E + YD DYI ALEYGMPP +G GIG+DRL
Sbjct: 480 ANGFSELNDAEDQAERFRKQVEAAASGDDE-AMPYDKDYIRALEYGMPPTAGQGIGIDRL 538
Query: 420 IMLLTNSKNIRDVILFPHLRNE 441
+M LTNS++IRDVILFPH++ E
Sbjct: 539 VMYLTNSQSIRDVILFPHMKPE 560
>gi|422023439|ref|ZP_16369944.1| lysyl-tRNA ligase [Providencia sneebia DSM 19967]
gi|414094207|gb|EKT55877.1| lysyl-tRNA ligase [Providencia sneebia DSM 19967]
Length = 505
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 223/440 (50%), Positives = 308/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF LQD G +IQ+Y+S + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 74 MTRRIMGKASFATLQDMGG-----RIQIYVSRDDLAEGIYNEQFKKWDLGDILGAKGRLF 128
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGEL++ ++L+TK+LRPLP+KF LS+QE +YR RY+DLI N+ +R F R++
Sbjct: 129 KTKTGELTVHCHEVRLLTKALRPLPDKFHGLSDQETRYRQRYLDLIANDESRHTFVVRSK 188
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ +R+FM FMEVETP++ PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 189 ILAEVRNFMVNKGFMEVETPMMQVIPGGATARPFVTHHNALDIDMYLRIAPELYLKRLVV 248
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEG+SPRHNPEFTM+E Y AY +Y L++ TE++ + + +G
Sbjct: 249 GGFERVFEINRNFRNEGLSPRHNPEFTMMELYMAYADYRDLIELTEELFRTLTQKVLGNP 308
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y + DFSK F KLT+ EAI KY P+ N DL + + + I K + L
Sbjct: 309 DVQYGDQEFDFSKPFAKLTMKEAICKYRPETNIADLDDMDKAVAIAQSIGIKIEKSWGLG 368
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+Q +FEE E+ L PT+I YP E+SPLAR+ N +N IT+RFE FI G EI
Sbjct: 369 R-----IQCEIFEEVAESHLIQPTFIIEYPAEVSPLARR-NDDNPFITDRFEFFIGGREI 422
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF Q+ K++ + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 423 GNGFSELNDAEDQAERFAEQVRQKDDGDDE-AMFYDEDYVVALEHGLPPTAGLGIGIDRM 481
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP LR
Sbjct: 482 VMLFTNSHTIRDVILFPALR 501
>gi|443645035|ref|ZP_21128885.1| Lysyl-tRNA synthetase (class II) [Pseudomonas syringae pv. syringae
B64]
gi|443285052|gb|ELS44057.1| Lysyl-tRNA synthetase (class II) [Pseudomonas syringae pv. syringae
B64]
Length = 500
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 222/441 (50%), Positives = 317/441 (71%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ +I+ + + K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKILPEETLAEVKTWDLGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L ++++S++L+TKSLRPLP+K L++ E +YR RY+DLI+NE R+ F+ R+
Sbjct: 124 ARSGKGDLYVEMTSVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEEVRETFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ K DF+EVETP+L PGGA AKPF THHN+L+M+MFLRIAPELYLKRL+
Sbjct: 184 QVIAHIRSFLMKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +GT
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGT 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DLQ+ ++ KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTAADLQDIDKARAIAKKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+ N EN N+T+RFELFI G E
Sbjct: 359 GFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDENPNVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF+ Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFQAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLT+S +IRDVILFPH+R
Sbjct: 477 LVMLLTDSPSIRDVILFPHMR 497
>gi|78047472|ref|YP_363647.1| lysyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria str.
85-10]
gi|123771380|sp|Q3BUB6.1|SYK_XANC5 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|78035902|emb|CAJ23593.1| lysyl-tRNA synthetase heat inducible [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 505
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 213/445 (47%), Positives = 310/445 (69%), Gaps = 21/445 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M KRVMGK SF +QD SG ++QL++ ++G + YT FK +D+GDI+ +G L +
Sbjct: 77 MAKRVMGKASFAQIQDESG-----RVQLFLQGNVLG-DAYTAFKGWDVGDIVAVEGGLTR 130
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+K +L+L+TKSLRPLP+K+ LS+ E +YR RY+DLI+ R+VF KR++I
Sbjct: 131 TKTGELSVKAGALRLLTKSLRPLPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFIKRSKI 190
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I ++R +++ F+EVETP++H PGGA AKPF THHN+L++ ++LR+APELYLKRL++G
Sbjct: 191 IRAMRAWLDARRFLEVETPMMHYIPGGATAKPFTTHHNALDLDLYLRVAPELYLKRLVVG 250
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G +++EIN+NFRNEG+S RHNPEFTM+E Y AY Y +M TE++I+ +GTT+
Sbjct: 251 GLERVYEINRNFRNEGVSTRHNPEFTMLELYEAYATYHQIMDLTEQVIRDTAQTVLGTTQ 310
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELK----KINPKFNQKK 296
+ + G +D + +F + + EA++ + P+ + D ++ L + ++ P ++ K
Sbjct: 311 VSWDGADIDLAPAFRRWRMDEAVRHHNPEISAADCTDREALLRHCERLKIRVKPSYDWGK 370
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
+L L +FE T E L PT+IT++P E+SPLAR S+ E T+RFELFI G
Sbjct: 371 LL---------LEIFEATVEHTLVQPTFITDHPVEVSPLARSSDTE-PGYTDRFELFING 420
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELNDPE+Q+ RF+ Q+ K+ + E + ++D DYI ALEYGM P G GIG+
Sbjct: 421 KELANGFSELNDPEDQAARFQAQVQAKDGGDDE-AMHFDADYIRALEYGMAPTGGLGIGI 479
Query: 417 DRLIMLLTNSKNIRDVILFPHLRNE 441
DRL+MLLT S +IRDV+LFP++R E
Sbjct: 480 DRLVMLLTGSTSIRDVLLFPYMRPE 504
>gi|260771796|ref|ZP_05880714.1| lysyl-tRNA synthetase (class II) [Vibrio metschnikovii CIP 69.14]
gi|260613088|gb|EEX38289.1| lysyl-tRNA synthetase (class II) [Vibrio metschnikovii CIP 69.14]
Length = 510
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 222/443 (50%), Positives = 315/443 (71%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM K F+++Q+TSG +IQ Y +++ + L ++ DIGDIIG KG L K+
Sbjct: 78 RVMAKRGPFLVIQETSG-----RIQAY-ADKTVQAELKEKYQGLDIGDIIGVKGALHKSG 131
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE++YR RY+DLI+NE++R+ F R++++S
Sbjct: 132 KGDLYVNIEQYELLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSRQAFVIRSKVMS 191
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM FMEVETP++H PGGA A+PFITHHN+L+M M+LRIAPELYLKRL++GGF
Sbjct: 192 AIRNFMTSKQFMEVETPMMHVIPGGASARPFITHHNALDMPMYLRIAPELYLKRLVVGGF 251
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
+++FEIN+NFRNEG+SPRHNPEFTM+EFY AY +Y LM FTE+++ + ++ +G+T +
Sbjct: 252 DRVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDFTEELLSTVALEVLGSTSMP 311
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y ++F + ++++ EAIK Y PQ+ +I DLQN+ + S K ++
Sbjct: 312 YGDETVEFGGKYARMSMFEAIKHYNPQHAQIQALTEDDLQNRDLMVSIAKSVHVDVEPFW 371
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E KL PT+IT YP +ISPLAR+S+ +N T+RFE FI G
Sbjct: 372 TCGQLLEEI-----FGETAEPKLMQPTFITGYPADISPLARRSD-DNPFFTDRFEFFIGG 425
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND E+Q RFK+Q++ K + E + +YD DYI ALE+G+PP +G GIG+
Sbjct: 426 REVANGFSELNDAEDQDARFKSQVEAKESGDDE-AMFYDADYITALEHGLPPTAGQGIGI 484
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL+MLLTN+ IRDVILFP +R
Sbjct: 485 DRLVMLLTNTHTIRDVILFPAMR 507
>gi|284008433|emb|CBA74887.1| lysyl-tRNA synthetase [Arsenophonus nasoniae]
Length = 504
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 227/438 (51%), Positives = 310/438 (70%), Gaps = 13/438 (2%)
Query: 3 KRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLFKT 61
+R+MGK SF LQD G +IQ+YIS + + + +Y + FK +D+GDI+G KG LFKT
Sbjct: 76 RRIMGKASFATLQDMGG-----RIQIYISRDDLPEGIYNEQFKKWDLGDILGVKGKLFKT 130
Query: 62 NTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQII 121
TGEL+I + L+TK+LRPLP+KF L++QE +YR RY+DLI N+ +R+ F R++++
Sbjct: 131 KTGELTIHGYEVYLLTKALRPLPDKFHGLADQETRYRQRYLDLIANDRSRQTFITRSRVL 190
Query: 122 SSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGG 181
S++R+FM DFMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++GG
Sbjct: 191 SALRNFMVSKDFMEVETPMMQVIPGGAAARPFITHHNALDIDMYLRIAPELYLKRLVVGG 250
Query: 182 FNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKI 241
F ++FEIN+NFRNEGISPRHNPEFTM+E Y AY +Y L+ TE++ + + + +GTT++
Sbjct: 251 FERVFEINRNFRNEGISPRHNPEFTMMELYMAYADYKDLIVLTEELFRTVTQEVLGTTQV 310
Query: 242 DYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNNL 301
Y L DF + F K+T+ EAI KY + DL + + K +N + + L L
Sbjct: 311 KYGEHLFDFGQPFSKMTMKEAIVKYRAETVLADLDDMTKATAIAKSLNIEPEKGWGLGRL 370
Query: 302 KKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIAN 361
+ +I FE E+ L PT+IT YP E+SPLAR+ N N IT+RFE FI G EI N
Sbjct: 371 QCEI-----FEAVAESHLIQPTFITEYPAEVSPLARR-NDNNPFITDRFEFFIGGREIGN 424
Query: 362 GFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLIM 421
GFSELND E+Q+ RF Q+ K+E + E + +YD DYI ALE+G+PP +G GIG+DR+IM
Sbjct: 425 GFSELNDAEDQAERFAQQVRQKDEGDDE-AMFYDEDYITALEHGLPPTAGLGIGIDRMIM 483
Query: 422 LLTNSKNIRDVILFPHLR 439
LLT+S IRDVILFP LR
Sbjct: 484 LLTDSHTIRDVILFPALR 501
>gi|329896806|ref|ZP_08271722.1| Lysyl-tRNA synthetase (class II) [gamma proteobacterium IMCC3088]
gi|328921561|gb|EGG28941.1| Lysyl-tRNA synthetase (class II) [gamma proteobacterium IMCC3088]
Length = 494
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 219/446 (49%), Positives = 313/446 (70%), Gaps = 25/446 (5%)
Query: 5 VMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLF 59
V+G++ +F+++Q+ SG +IQLYI+ + + + K +D+GDI+ AKG L
Sbjct: 65 VVGRLIRNRGAFLLIQEESG-----QIQLYINRQALSEETLAQIKTWDLGDIVAAKGPLH 119
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
K+ G+L I + +L+TKSLRPLP+K+ L++QE++YR RY+DLI+N++ R FK R++
Sbjct: 120 KSGKGDLYINMEEARLLTKSLRPLPDKYHGLADQELRYRQRYVDLIVNDDVRARFKLRSK 179
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FME FMEVETP++ PGGA AKPF+THHN+L++ M+LRIAPELYLKRL +
Sbjct: 180 IVAYIRDFMEARGFMEVETPMMQVIPGGATAKPFVTHHNALDLDMYLRIAPELYLKRLTV 239
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEG+S RHNPEFTM+E+Y AY +Y M TE+M++ ++ D +G T
Sbjct: 240 GGFERVFEINRNFRNEGLSTRHNPEFTMLEYYWAYADYRDAMLLTEQMLQGLVGDVLGAT 299
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDL----QNKLFLKSELKKINPKFNQK 295
IDYQG LDFS F++ T+ ++I + P + L Q F +S + P +
Sbjct: 300 TIDYQGHTLDFSGEFDRFTVFDSILAHNPTLSAEQLADMAQACAFAESLGIDVKPTWGLG 359
Query: 296 KILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFII 355
K+ Q+ +FE+T E +L PT+IT YPTE+SPLAR+S+ + +T+RFE F+
Sbjct: 360 KV---------QIEIFEKTVEHRLIQPTFITAYPTEVSPLARRSD-SDPFVTDRFEFFVA 409
Query: 356 GNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIG 415
G E+ANGFSELND E+Q+ RFK Q+ K+ E + ++D DYI ALEYGMPP +G GIG
Sbjct: 410 GRELANGFSELNDAEDQAERFKAQVAEKD-AGDEEAMHFDADYIRALEYGMPPTAGEGIG 468
Query: 416 VDRLIMLLTNSKNIRDVILFPHLRNE 441
+DRL+MLLT+S +IRDV+LFPH+R E
Sbjct: 469 IDRLVMLLTDSPSIRDVLLFPHMRPE 494
>gi|424794120|ref|ZP_18220137.1| lysyl-tRNA synthetase heat inducible [Xanthomonas translucens pv.
graminis ART-Xtg29]
gi|422796166|gb|EKU24725.1| lysyl-tRNA synthetase heat inducible [Xanthomonas translucens pv.
graminis ART-Xtg29]
Length = 505
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 215/445 (48%), Positives = 310/445 (69%), Gaps = 21/445 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
+ KRVMGK SF+ LQD SG +IQL++ +G Y FK +DIGDIIG +G L +
Sbjct: 77 LAKRVMGKASFVQLQDESG-----RIQLFLQANALGPA-YDAFKGWDIGDIIGVEGGLTR 130
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS++ S+L+L+TK+LRPLP+K+ LS+ E +YR RY+DLI++ R+VF KR++I
Sbjct: 131 TKTGELSVRASALRLLTKALRPLPDKWHGLSDVEQRYRQRYVDLIVSPEAREVFVKRSRI 190
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I ++R +++ F+EVETP++H PGGA AKPF THHN+L++ ++LR+APELYLKRL++G
Sbjct: 191 IRAMRAWLDARRFLEVETPMMHYIPGGATAKPFTTHHNALDLDLYLRVAPELYLKRLVVG 250
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G +++EIN+NFRNEG+S RHNPEFTM+E Y AY Y +M TE +I+ + + +GTT+
Sbjct: 251 GLERVYEINRNFRNEGVSTRHNPEFTMMELYEAYATYHEVMDLTESVIRDVAQEVLGTTQ 310
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKI----NPKFNQKK 296
+ + G +D + +F + + EA++ + P+ + D ++ L +++ P + K
Sbjct: 311 VHWDGADIDLAPAFRRWRMDEAVRHHNPEISAADCTDRAALLRHCERLKIRTKPSYGWGK 370
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
+L L +FE T E L PT+IT++P E+SPLAR S+ E T+RFELFI G
Sbjct: 371 LL---------LEIFEATVEHTLIQPTFITDHPVEVSPLARSSDTE-PGYTDRFELFING 420
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
EIANGFSELNDPE+Q+ RF+ Q+ K + E + ++D DYI ALE G+PP G GIG+
Sbjct: 421 KEIANGFSELNDPEDQAARFQAQVAAKEGGDDE-AMHFDADYIRALEVGLPPTGGLGIGI 479
Query: 417 DRLIMLLTNSKNIRDVILFPHLRNE 441
DRL+MLLT S +IRDV+LFP++R E
Sbjct: 480 DRLVMLLTGSSSIRDVLLFPYMRPE 504
>gi|325925183|ref|ZP_08186596.1| lysyl-tRNA synthetase (class II) [Xanthomonas perforans 91-118]
gi|346724800|ref|YP_004851469.1| lysyl-tRNA synthetase [Xanthomonas axonopodis pv. citrumelo F1]
gi|325544437|gb|EGD15807.1| lysyl-tRNA synthetase (class II) [Xanthomonas perforans 91-118]
gi|346649547|gb|AEO42171.1| lysyl-tRNA synthetase [Xanthomonas axonopodis pv. citrumelo F1]
Length = 505
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 213/445 (47%), Positives = 309/445 (69%), Gaps = 21/445 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M KRVMGK SF +QD SG ++QL++ ++G + YT FK +D+GDI+ +G L +
Sbjct: 77 MAKRVMGKASFAQIQDESG-----RVQLFLQGNVLG-DAYTAFKGWDVGDIVAVEGGLTR 130
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+K +L+L+TKSLRPLP+K+ LS+ E +YR RY+DLI+ R+VF KR++I
Sbjct: 131 TKTGELSVKAGALRLLTKSLRPLPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFIKRSKI 190
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I ++R +++ F+EVETP++H PGGA AKPF THHN+L++ ++LR+APELYLKRL++G
Sbjct: 191 IRAMRAWLDARRFLEVETPMMHYIPGGATAKPFTTHHNALDLDLYLRVAPELYLKRLVVG 250
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G +++EIN+NFRNEG+S RHNPEFTM+E Y AY Y +M TE++I+ +GTT+
Sbjct: 251 GLERVYEINRNFRNEGVSTRHNPEFTMLELYEAYATYHQIMDLTEQVIRDTAQTVLGTTQ 310
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELK----KINPKFNQKK 296
+ + G +D + +F + + EA++ + P+ + D ++ L + ++ P + K
Sbjct: 311 VSWDGADIDLAPAFRRWRMDEAVRHHNPEISAADCTDREALLRHCERLKIRVKPSYGWGK 370
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
+L L +FE T E L PT+IT++P E+SPLAR S+ E T+RFELFI G
Sbjct: 371 LL---------LEIFEATVEHTLVQPTFITDHPVEVSPLARSSDTE-PGYTDRFELFING 420
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELNDPE+Q+ RF+ Q+ K+ + E + ++D DYI ALEYGM P G GIG+
Sbjct: 421 KELANGFSELNDPEDQAARFQAQVQAKDGGDDE-AMHFDADYIRALEYGMAPTGGLGIGI 479
Query: 417 DRLIMLLTNSKNIRDVILFPHLRNE 441
DRL+MLLT S +IRDV+LFP++R E
Sbjct: 480 DRLVMLLTGSTSIRDVLLFPYMRPE 504
>gi|422665016|ref|ZP_16724889.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. aptata str. DSM
50252]
gi|330975435|gb|EGH75501.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. aptata str. DSM
50252]
Length = 500
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 222/441 (50%), Positives = 315/441 (71%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +GP IQ+Y++ + + + + K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTGP-----IQVYVNRKTLPEETLAEVKTWDLGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L ++++S++L+TKSLRPLP+K L++ E +YR RY+DLI+NE R+ F+ R+
Sbjct: 124 ARSGKGDLYVEMTSVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEEVRETFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ K DF+EVETP+L PGGA AKPF THHN+L+M+MFLRIAPELYLKRL+
Sbjct: 184 QVIAHIRSFLMKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +GT
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGT 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DLQ+ ++ KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTAADLQDIDKARAIAKKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+ N EN N+T+RFELFI G E
Sbjct: 359 GFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDENPNVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF+ Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFQAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLT S +IRDVILFPH+R
Sbjct: 477 LVMLLTASPSIRDVILFPHMR 497
>gi|254513974|ref|ZP_05126035.1| lysyl-tRNA synthetase [gamma proteobacterium NOR5-3]
gi|219676217|gb|EED32582.1| lysyl-tRNA synthetase [gamma proteobacterium NOR5-3]
Length = 499
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 207/432 (47%), Positives = 312/432 (72%), Gaps = 12/432 (2%)
Query: 10 SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTNTGELSIK 69
+F+++QD G+IQLY+ + + + K++D+GDI+ A+G L ++ G+L I
Sbjct: 80 AFLLIQD-----GEGQIQLYVDRKGLSEETLASIKSWDLGDIVAARGPLHRSGKGDLYIN 134
Query: 70 VSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIISSIRHFME 129
+ +L+TK+LRPLP+K+ L++QE++YR RY+DLI+NE +R+VF+ R+++IS IR FM+
Sbjct: 135 MREARLLTKALRPLPDKYHGLADQELRYRQRYVDLIVNERSREVFRIRSRVISYIRKFMD 194
Query: 130 KNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGFNKIFEIN 189
DFMEVETP++ PGGA AKPF+THHN+L++ M+LRIAPELYLKRL +GGF +++EIN
Sbjct: 195 GRDFMEVETPMMQPIPGGAAAKPFVTHHNALDLTMYLRIAPELYLKRLTVGGFERVYEIN 254
Query: 190 KNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKIDYQGRLLD 249
+NFRNEG+S RHNPEFTM+E+Y AY +Y M TE M++ + + +G+ +++YQG++ D
Sbjct: 255 RNFRNEGLSTRHNPEFTMLEYYWAYADYQDAMDLTEHMLRGLTQEVLGSQQVNYQGQVFD 314
Query: 250 FSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNNLKKDILQLM 309
FS+ F ++T+ EAI Y P + D+ + + + + + + L +Q+
Sbjct: 315 FSQPFARMTVTEAILAYNPSLSMADIAERELARRVAEGLGIEVHTSWGLGK-----IQIE 369
Query: 310 LFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIANGFSELNDP 369
+FE+T E +L PT+IT YPTE+SPLAR+ N ++ +T+RFE F+ G E+ANGFSELND
Sbjct: 370 IFEKTAEHRLEQPTFITAYPTEVSPLARR-NDDDPFVTDRFEFFVAGRELANGFSELNDA 428
Query: 370 EEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLIMLLTNSKNI 429
E+Q+ RFK+Q+ K+ E + ++D DY+ ALEYGMPP +G GIG+DRL+MLLT+S +I
Sbjct: 429 EDQAQRFKDQVAQKD-AGDEEAMHFDADYVRALEYGMPPTAGEGIGIDRLVMLLTDSPSI 487
Query: 430 RDVILFPHLRNE 441
RDV+LFPH+R E
Sbjct: 488 RDVLLFPHMRPE 499
>gi|440729807|ref|ZP_20909920.1| lysyl-tRNA ligase [Xanthomonas translucens DAR61454]
gi|440380458|gb|ELQ17024.1| lysyl-tRNA ligase [Xanthomonas translucens DAR61454]
Length = 505
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 219/445 (49%), Positives = 310/445 (69%), Gaps = 21/445 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
+ KRVMGK SF+ LQD SG +IQL++ +G Y FK +DIGDIIG +G L +
Sbjct: 77 LAKRVMGKASFVQLQDESG-----RIQLFLQANALGPA-YDAFKGWDIGDIIGVEGGLTR 130
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS++ S+L+L+TK+LRPLP+K+ LS+ E +YR RY+DLI++ R+VF KR++I
Sbjct: 131 TKTGELSVRASALRLLTKALRPLPDKWHGLSDVEQRYRQRYVDLIVSPEAREVFVKRSKI 190
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I ++R +++ F+EVETP++H PGGA AKPF THHN+L+M ++LR+APELYLKRL++G
Sbjct: 191 IRAMRAWLDARRFLEVETPMMHYIPGGATAKPFTTHHNALDMDLYLRVAPELYLKRLVVG 250
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G +++EIN+NFRNEG+S RHNPEFTM+E Y AY Y +M TE +I+ + + +GTT+
Sbjct: 251 GLERVYEINRNFRNEGVSTRHNPEFTMMELYEAYATYHEVMDLTESVIRDVAQEVLGTTQ 310
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNK--LFLKSELKKIN--PKFNQKK 296
+ + G +D + +F + + EA++ + PQ + D ++ L E KI P + K
Sbjct: 311 VHWDGADIDLAPAFRRWRMDEAVRHHNPQISAADCTDRDALLRHCERLKIRTKPSYGWGK 370
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
+L L +FE T E L PT+IT++P E+SPLAR S+ E T+RFELF+ G
Sbjct: 371 LL---------LEIFEATVEHTLIQPTFITDHPVEVSPLARSSDTE-PGYTDRFELFVNG 420
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
EIANGFSELNDPE+Q+ RF+ Q+ K + E + ++D DYI ALE G+PP G GIG+
Sbjct: 421 KEIANGFSELNDPEDQAARFQVQVAAKEGGDDE-AMHFDADYIRALEVGLPPTGGLGIGI 479
Query: 417 DRLIMLLTNSKNIRDVILFPHLRNE 441
DRL+MLLT S +IRDV+LFP++R E
Sbjct: 480 DRLVMLLTGSSSIRDVLLFPYMRPE 504
>gi|389736448|ref|ZP_10189998.1| lysyl-tRNA ligase [Rhodanobacter sp. 115]
gi|388439327|gb|EIL95915.1| lysyl-tRNA ligase [Rhodanobacter sp. 115]
Length = 506
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 217/444 (48%), Positives = 315/444 (70%), Gaps = 14/444 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
+LKRV GK+SF+ LQD +G +IQL++ +G+ +Y FK +D+GDI+GA+G L +
Sbjct: 75 VLKRVQGKVSFVQLQDMTG-----RIQLFVHAGTVGE-VYDAFKGWDMGDIVGAEGVLMR 128
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELSIK L+L+TKSLRPLP+K +++ E +YR RY+DLI+ E R F+KR++I
Sbjct: 129 TKTGELSIKTDQLRLLTKSLRPLPDKHHGMADVEQRYRQRYVDLIVTEEARDTFQKRSRI 188
Query: 121 ISSIRHFMEK--NDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
I IR ++E FMEVETP++H PGGA AKPFITHHN+L+M ++LR+APELYLKRL+
Sbjct: 189 IGFIRQWLEAAPRRFMEVETPMMHVIPGGATAKPFITHHNALDMDLYLRVAPELYLKRLV 248
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF++++EIN+NFRNEG+S RHNPEFTM+E Y AY Y +M TE +I++ IG+
Sbjct: 249 VGGFDRVYEINRNFRNEGVSTRHNPEFTMLELYQAYATYNEIMDLTESVIRETAKAVIGS 308
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T++ + G +D +F + T+ +A+ + P +L+++ + + K++ + + +
Sbjct: 309 TELTWDGAQIDVGPAFRRWTMEDAVLELNPDIKREELRDRAAMAAHAKRLGVQV--EGTV 366
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
+ K L L +FE+T E L PT+IT +P E+SPLAR+ N + IT+RFELF+ G E
Sbjct: 367 SGWGK--LLLEIFEKTVEHTLIQPTFITQHPVEVSPLARE-NDSDKGITDRFELFVNGKE 423
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
+ANGFSELNDPE+Q+ RFK Q++ K+ + E + ++D DYI ALE G+PP G GIG+DR
Sbjct: 424 LANGFSELNDPEDQAARFKAQVEAKDAGDDE-AMHFDADYIRALEVGLPPTGGLGIGIDR 482
Query: 419 LIMLLTNSKNIRDVILFPHLRNEN 442
L+MLLT S +IRDV+LFP++R E
Sbjct: 483 LVMLLTGSASIRDVLLFPYMRPEG 506
>gi|85059967|ref|YP_455669.1| lysyl-tRNA synthetase [Sodalis glossinidius str. 'morsitans']
gi|123766398|sp|Q2NRG1.1|SYK_SODGM RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|84780487|dbj|BAE75264.1| lysyl-tRNA synthase [Sodalis glossinidius str. 'morsitans']
Length = 506
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 220/440 (50%), Positives = 305/440 (69%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF LQD GKIQLY++ + + + Y + FK +D+GDI+G +G LF
Sbjct: 76 MTRRIMGKASFATLQDV-----GGKIQLYVARDDLPEGQYNEQFKKWDLGDILGTRGKLF 130
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELS+ S ++L+TK++RPLP+KF L++QE +YR RY+DLI N+ +R+ FK R++
Sbjct: 131 KTRTGELSVHCSEIRLLTKAMRPLPDKFHGLADQETRYRQRYLDLIANDESRQTFKVRSR 190
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM NDFMEVETP++ PGGA A+PFITHHN+L + M+LRIAPELYLKRL++
Sbjct: 191 IMAEIRRFMMDNDFMEVETPMMQTIPGGAAARPFITHHNALGIDMYLRIAPELYLKRLVV 250
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEG+SPRHNPEFTM+E Y AY +Y L+ E + + + +G++
Sbjct: 251 GGFERVFEINRNFRNEGLSPRHNPEFTMMELYMAYADYRDLIVLVETLFRTLTQRVLGSS 310
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ + DF K F ++T+ EAI Y P+ L + + + + K ++ L
Sbjct: 311 VVHNGDQTFDFGKPFTQMTMKEAICHYRPETRPEALDDMASATAIAESLGIKVDKSWGLG 370
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
++ ++ FEET E+ L PT+IT YP E+SPLAR+ N +N T+RFE FI G EI
Sbjct: 371 RVQTEV-----FEETAESHLIQPTFITAYPAEVSPLARR-NDDNPFFTDRFEFFIGGREI 424
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF Q K+ + E + +YD DY+ ALE+G+PP +G GIG+DRL
Sbjct: 425 GNGFSELNDAEDQAARFAEQAQAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRL 483
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+MLLTNS IRDVILFP LR
Sbjct: 484 MMLLTNSHTIRDVILFPALR 503
>gi|416018101|ref|ZP_11565102.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. B076]
gi|320323151|gb|EFW79240.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. B076]
Length = 500
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 220/441 (49%), Positives = 317/441 (71%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + + + K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLAEETLAEVKTWDLGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L +++++++L+TKSLRPLP+K L++ E +YR RY+DLI+NE+ R+ F+ R+
Sbjct: 124 ARSGKGDLYVEMTTVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEDVRETFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ K DF+EVETP+L PGGA AKPF THHN+L+M+MFLRIAPELYLKRL+
Sbjct: 184 QVIAHIRSFLMKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +GT
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGT 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P DLQ+ ++ KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPDLTAADLQDVDKARAIAKKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+ N EN ++T+RFELFI G E
Sbjct: 359 GFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDENPSVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF+ Q+ K+ + E + +YDTD++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFQAQVADKDAGDDE-AMHYDTDFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLT+S +IRDVILFPH+R
Sbjct: 477 LVMLLTDSPSIRDVILFPHMR 497
>gi|422638318|ref|ZP_16701749.1| lysyl-tRNA synthetase [Pseudomonas syringae Cit 7]
gi|440744232|ref|ZP_20923536.1| lysyl-tRNA ligase [Pseudomonas syringae BRIP39023]
gi|330950713|gb|EGH50973.1| lysyl-tRNA synthetase [Pseudomonas syringae Cit 7]
gi|440374246|gb|ELQ10982.1| lysyl-tRNA ligase [Pseudomonas syringae BRIP39023]
Length = 500
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 221/441 (50%), Positives = 317/441 (71%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + + + K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLPEETLAEVKTWDLGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L ++++S++L+TKSLRPLP+K L++ E +YR RY+DLI+NE+ R+ F+ R+
Sbjct: 124 ARSGKGDLYVEMTSVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEDVRETFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ K DF+EVETP+L PGGA AKPF THHN+L+M+MFLRIAPELYLKRL+
Sbjct: 184 QVIAHIRSFLMKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +GT
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGT 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DLQ+ ++ KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTAADLQDIDKARAIAKKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+ N EN N+T+RFELFI G E
Sbjct: 359 GFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDENPNVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF+ Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFQAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLT+S +IRDVILFPH+R
Sbjct: 477 LVMLLTDSPSIRDVILFPHMR 497
>gi|383933809|ref|ZP_09987253.1| lysyl-tRNA synthetase, class II [Rheinheimera nanhaiensis E407-8]
gi|383705415|dbj|GAB57344.1| lysyl-tRNA synthetase, class II [Rheinheimera nanhaiensis E407-8]
Length = 506
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 216/440 (49%), Positives = 312/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF +QD G K Q+Y++ + + + LY + FK +D+GDI+G KG LF
Sbjct: 74 MTRRIMGKASFTTMQDMGG-----KFQVYVARDSLPEGLYNEQFKKWDLGDILGVKGHLF 128
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGEL++ + ++L+TK+LRPLP+KF L++ E +YR RY+DLI NE +R F R++
Sbjct: 129 KTQTGELTVWATEIRLLTKALRPLPDKFHGLTDNEARYRQRYLDLISNEQSRHTFLVRSK 188
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
++ IR F + F+EVETP+L PGGA A+PF THHN+L+M+MFLRIAPELYLKRL++
Sbjct: 189 TVAYIRKFFNEEGFLEVETPMLQAIPGGASARPFETHHNALDMQMFLRIAPELYLKRLVV 248
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF K+FE+N+NFRNEG+S RHNPEFTM+EFY AY +Y LM TEK+ + + +G+T
Sbjct: 249 GGFEKVFELNRNFRNEGVSTRHNPEFTMLEFYWAYADYNDLMDLTEKLFRGLAQHVLGST 308
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++ YQG + DF K F ++++ E+I Y P+ + L + + + K + ++ +
Sbjct: 309 EVPYQGEVFDFGKPFARMSVTESILHYNPEITKEQLATRESVAALAKTLG-----IEVKD 363
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
N + + +F+E ETKL +PT+IT YP E+SPLAR+ N N IT+RFE FI G E+
Sbjct: 364 NYGHGRILMEVFDELVETKLRHPTFITEYPAEVSPLARR-NDHNPEITDRFEFFIGGREL 422
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF++Q+ K+ + E + YYD D++ ALE+G+PP +G GIG+DRL
Sbjct: 423 GNGFSELNDAEDQAERFQHQVAQKDAGDDE-AMYYDEDFVTALEHGLPPTAGQGIGIDRL 481
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+MLL ++ +IRDVILFPH+R
Sbjct: 482 VMLLADAASIRDVILFPHMR 501
>gi|410663248|ref|YP_006915619.1| lysyl-tRNA synthetase [Simiduia agarivorans SA1 = DSM 21679]
gi|409025605|gb|AFU97889.1| lysyl-tRNA synthetase [Simiduia agarivorans SA1 = DSM 21679]
Length = 496
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 221/443 (49%), Positives = 314/443 (70%), Gaps = 22/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM K F+++QD SG +IQLY +++ + L +DIGD++G G L K+
Sbjct: 71 RVMAKRGPFMLMQDGSG-----QIQLY-ADKAAQQQLKETSGLWDIGDVVGVTGQLHKSG 124
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TKSLRPLP+KF LS+QEI+YR RY+DLI+N R VF+ RT++I
Sbjct: 125 KGDLYVNLEQFQLLTKSLRPLPDKFHGLSDQEIRYRQRYVDLIVNPEVRDVFRTRTKVIG 184
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
IR+++ + DFMEVETP+LH PGGA A+PF+THHN+L++ MFLRIAPELYLKRL++GGF
Sbjct: 185 FIRNYLNQQDFMEVETPMLHVIPGGASARPFVTHHNALDVDMFLRIAPELYLKRLVVGGF 244
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
+++EIN+NFRNEG+S RHNPEFTM+EFY AY +Y LM TE M++K+ ++ +G+T +
Sbjct: 245 ERVYEINRNFRNEGLSTRHNPEFTMLEFYQAYADYKDLMDLTEDMLRKLAIEVLGSTAFE 304
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI---DLQNKLFLKSELK-KINPKFNQKKIL 298
YQG DF++ F+++++++AI KY D++ + ++L + P + K+
Sbjct: 305 YQGTAFDFAQPFDRISVVDAILKYNAGIERAQLEDMEQATAIANKLGIDVKPTWGLGKV- 363
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
Q+ +FEET E KL PT+IT YP E+SPLAR+ N +N +T+RFE F+ G E
Sbjct: 364 --------QIEIFEETAEHKLIQPTFITEYPAEVSPLARR-NDDNPFVTDRFEFFVGGRE 414
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IANGFSELND E+Q+ RF Q+ K+ + E + +YD DY+ ALEYG+PP +G GIG+DR
Sbjct: 415 IANGFSELNDAEDQADRFMQQVQEKDAGDDE-AMHYDADYVRALEYGLPPTAGEGIGIDR 473
Query: 419 LIMLLTNSKNIRDVILFPHLRNE 441
L+MLLTNS +IRDV+LFPH+R E
Sbjct: 474 LVMLLTNSPSIRDVLLFPHMRPE 496
>gi|212710039|ref|ZP_03318167.1| hypothetical protein PROVALCAL_01092 [Providencia alcalifaciens DSM
30120]
gi|422017326|ref|ZP_16363891.1| lysyl-tRNA ligase [Providencia alcalifaciens Dmel2]
gi|212687246|gb|EEB46774.1| hypothetical protein PROVALCAL_01092 [Providencia alcalifaciens DSM
30120]
gi|414105476|gb|EKT67033.1| lysyl-tRNA ligase [Providencia alcalifaciens Dmel2]
Length = 505
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 224/440 (50%), Positives = 308/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF LQD G +IQ+Y+S + + + +Y + FK +D+GDI+GAKG LF
Sbjct: 74 MTRRIMGKASFATLQDVGG-----RIQIYVSRDDLPEGIYNEQFKKWDLGDILGAKGRLF 128
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGEL++ ++L+TK+LRPLP+KF LS+QE +YR RY+DLI N+ +R F R++
Sbjct: 129 KTKTGELTVHCHEVRLLTKALRPLPDKFHGLSDQETRYRQRYLDLIANDESRNTFIIRSK 188
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ +R+FM + FMEVETP++ PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 189 ILAEVRNFMVDHGFMEVETPMMQVIPGGASARPFVTHHNALDIDMYLRIAPELYLKRLVV 248
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEG+SPRHNPEFTM+E Y AY +Y L+ TE + + + +G T
Sbjct: 249 GGFERVFEINRNFRNEGLSPRHNPEFTMMELYMAYADYRDLIVLTEDLFRILTQKVLGNT 308
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y + DF K F K+T+ EAI KY P+ N DL + + + + K + L
Sbjct: 309 VVKYGEQEFDFGKPFTKMTMKEAICKYRPETNVADLDDMDKAVAIAQSLGIKIEKSWGLG 368
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+Q +FEE E+ L PT+IT YP E+SPLAR+ N EN IT+RFE FI G EI
Sbjct: 369 R-----IQCEIFEEVAESHLIQPTFITEYPAEVSPLARR-NDENPFITDRFEFFIGGREI 422
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF Q+ K+E + E + +YD DY+ ALE+G+PP +G GIG+DR+
Sbjct: 423 GNGFSELNDAEDQAERFAEQVRQKDEGDDE-AMFYDEDYVTALEHGLPPTAGLGIGIDRM 481
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP LR
Sbjct: 482 VMLFTNSHTIRDVILFPALR 501
>gi|254229663|ref|ZP_04923073.1| lysyl-tRNA synthetase [Vibrio sp. Ex25]
gi|262395206|ref|YP_003287060.1| lysyl-tRNA synthetase [Vibrio sp. Ex25]
gi|451976232|ref|ZP_21927398.1| lysyl-tRNA synthetase [Vibrio alginolyticus E0666]
gi|151937784|gb|EDN56632.1| lysyl-tRNA synthetase [Vibrio sp. Ex25]
gi|262338800|gb|ACY52595.1| lysyl-tRNA synthetase (class II) [Vibrio sp. Ex25]
gi|451929848|gb|EMD77576.1| lysyl-tRNA synthetase [Vibrio alginolyticus E0666]
Length = 505
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 222/443 (50%), Positives = 315/443 (71%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
R+M K F+++Q+TSG +IQ Y + ++ K L ++ DIGDIIG KG L K+
Sbjct: 73 RIMAKRGPFLVIQETSG-----RIQAYAAKDV-QKELKEKYQGLDIGDIIGVKGALHKSG 126
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE++YR RY+DLI+NE++RK F R++++S
Sbjct: 127 KGDLYVNMEEYELLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSRKAFIVRSKVMS 186
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM FMEVETP++H PGGA A+PFITHHN+L+M M+LRIAPELYLKRL++GGF
Sbjct: 187 AIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPMYLRIAPELYLKRLVVGGF 246
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
+++FEIN+NFRNEG+SPRHNPEFTM+EFY AY +Y LM FTE+++ + + +G+T +
Sbjct: 247 DRVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDFTEELLSSVAQEVLGSTSMP 306
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y ++F ++ ++++ EAIK+Y P + +I DLQN+ + S K ++ +
Sbjct: 307 YGDETVEFGGTYTRMSMFEAIKQYNPDHAQIQALTEEDLQNRELMVSIAKSVHVEVEDFW 366
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E KL PT+IT YP +ISPLAR+S+ +N T+RFE FI G
Sbjct: 367 TCGQLLEEI-----FGETAEPKLMQPTFITGYPADISPLARRSD-DNPFFTDRFEFFIGG 420
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND E+Q RFK Q++ K + E + +YD DYI ALE+G+PP +G GIG+
Sbjct: 421 REVANGFSELNDAEDQDARFKAQVEAKESGDDE-AMFYDADYITALEHGLPPTAGQGIGI 479
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL+MLLTN+ IRDVILFP +R
Sbjct: 480 DRLVMLLTNTHTIRDVILFPAMR 502
>gi|389783418|ref|ZP_10194790.1| lysyl-tRNA ligase [Rhodanobacter spathiphylli B39]
gi|388434681|gb|EIL91615.1| lysyl-tRNA ligase [Rhodanobacter spathiphylli B39]
Length = 508
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 216/447 (48%), Positives = 315/447 (70%), Gaps = 23/447 (5%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
+LKRV GK+SF+ LQD SG +IQL+I +G + Y FK++D+GDI+GA+G L +
Sbjct: 75 VLKRVQGKVSFVQLQDFSG-----RIQLFIHQGTLG-DTYEAFKSWDMGDIVGAEGVLMR 128
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS++V L+L+TKSLRPLP+K +++ E +YR RY+DLI+ E R+ F R++I
Sbjct: 129 TRTGELSVRVDQLRLLTKSLRPLPDKHHGMADVEQRYRQRYVDLIVTEEARRTFMLRSRI 188
Query: 121 ISSIRHFMEK--NDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
I +R ++E FMEVETP++H PGGA AKPF THHN+L+++++LR+APELYLKRL+
Sbjct: 189 IGYMRQWLEAPTRRFMEVETPMMHMIPGGATAKPFTTHHNALDLELYLRVAPELYLKRLV 248
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF++++EIN+NFRNEG+S RHNPEFTM+E Y AY Y +M TE +I+ +GT
Sbjct: 249 VGGFDRVYEINRNFRNEGVSTRHNPEFTMLELYQAYATYHEIMDLTESVIRDTAQAVLGT 308
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKK----INPKFNQ 294
T++ + G +D +F + + +A+ ++ P+ +L+++ + + K+ + P +
Sbjct: 309 TQLTWDGAEIDVGPAFRRWRMEDAVLEHNPEIRREELRDREAMATHAKRLGAQVKPGYGW 368
Query: 295 KKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFI 354
K+L L +FE T E L PT+IT++P E+SPLAR+S+ + IT+RFELFI
Sbjct: 369 GKLL---------LEIFEHTVEHTLIQPTFITDHPVEVSPLARESDT-DKGITDRFELFI 418
Query: 355 IGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGI 414
G EIANGFSELNDPE+Q+ RF+ Q+D K+ + E + ++D DYI ALE G+PP G GI
Sbjct: 419 NGKEIANGFSELNDPEDQAARFQAQVDAKDAGDDE-AMHFDADYIRALEVGLPPTGGLGI 477
Query: 415 GVDRLIMLLTNSKNIRDVILFPHLRNE 441
G+DRL+MLLT S +IRDV+LFP++R E
Sbjct: 478 GIDRLVMLLTGSSSIRDVLLFPYMRPE 504
>gi|285018128|ref|YP_003375839.1| lysine-tRNA ligase [Xanthomonas albilineans GPE PC73]
gi|283473346|emb|CBA15851.1| probable lysine-trna ligase (lysyl-trna synthetase) protein
[Xanthomonas albilineans GPE PC73]
Length = 505
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 217/445 (48%), Positives = 307/445 (68%), Gaps = 21/445 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
+ KRVMGK SF+ LQD SG +IQLY+ +G Y FK +DIGDII +G L +
Sbjct: 77 LAKRVMGKASFVQLQDESG-----RIQLYLQANALGAA-YDAFKGWDIGDIIAVEGGLTR 130
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELSIK ++L+L+TK+LRPLP+K+ LS+ E +YR RY+DLI++ R VF KR++I
Sbjct: 131 TKTGELSIKATALRLLTKALRPLPDKWHGLSDVEQRYRQRYVDLIVSPEARAVFVKRSKI 190
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I ++R +++ F+EVETP++H PGGA AKPF THHN+L++ ++LR+APELYLKRL++G
Sbjct: 191 IRAMRAWLDARRFLEVETPMMHYIPGGATAKPFTTHHNALDLDLYLRVAPELYLKRLVVG 250
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G +++EIN+NFRNEG+S RHNPEFTM+E Y AY Y +M TE +I+ + D +GTT+
Sbjct: 251 GLERVYEINRNFRNEGVSTRHNPEFTMMELYEAYATYHEVMDLTESVIRDVARDVLGTTQ 310
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKI----NPKFNQKK 296
+ + G +D +F + + EA++ + PQ + D ++ L +++ P + K
Sbjct: 311 VHWDGVDIDLGPAFRRWRMDEAVRHHNPQISTADCTDREALIRHCERLKIRTKPSYGWGK 370
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
+L L +FE T E L PT+IT++P E+SPLAR S+ E T+RFELFI G
Sbjct: 371 LL---------LEIFEATVEPTLIQPTFITDHPVEVSPLARSSDTE-PGYTDRFELFING 420
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
EIANGFSELNDPE+Q+ RF+ Q+ K + E + ++D DYI ALE G+PP G GIG+
Sbjct: 421 KEIANGFSELNDPEDQAARFQAQVAAKEGGDDE-AMHFDADYIRALEVGLPPTGGLGIGI 479
Query: 417 DRLIMLLTNSKNIRDVILFPHLRNE 441
DRL+MLLT S +IRDV+LFP++R +
Sbjct: 480 DRLVMLLTGSASIRDVLLFPYMRPQ 504
>gi|386287651|ref|ZP_10064823.1| lysyl-tRNA synthetase [gamma proteobacterium BDW918]
gi|385279473|gb|EIF43413.1| lysyl-tRNA synthetase [gamma proteobacterium BDW918]
Length = 498
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 220/439 (50%), Positives = 312/439 (71%), Gaps = 13/439 (2%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
R+M K F++LQD +G +IQ+Y+ +++ L T+ K +DIGDII A G + K+
Sbjct: 72 RIMAKRGPFMVLQDMTG-----RIQVYVDKKLLPAELITEIKTWDIGDIISATGPVHKSG 126
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + L+TKSLRPLP+KF L++QE +YR RY+DLI+NE +R+ F R+++IS
Sbjct: 127 KGDLYVNMHETSLLTKSLRPLPDKFHGLTDQETRYRQRYVDLIMNETSRRTFAIRSKMIS 186
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
SIR+F+++ DF+EVETP++ PGGA A+PF+THHN+L+M M+LRIAPELYLKRL++GG
Sbjct: 187 SIRNFLQQKDFVEVETPMMQVIPGGASARPFVTHHNALSMDMYLRIAPELYLKRLVVGGI 246
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
++FEIN+NFRNEG+S RHNPEFTMIEFY AY +Y +M TE M++ + +GTT I+
Sbjct: 247 ERVFEINRNFRNEGLSTRHNPEFTMIEFYQAYADYKDMMDLTEAMLRNTAQEVLGTTVIN 306
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNNLK 302
YQG DF K F +L++ +++ +Y P+ L + + +K+ K L
Sbjct: 307 YQGSEYDFGKPFTRLSVFDSVLQYNPEITAEQLSDMAQATAIAEKLGVKVKDTWGLGK-- 364
Query: 303 KDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIANG 362
+Q+ +FEET E KL PT+IT YPTE+SPLAR+S+ N +T+RFE F+ G E+ANG
Sbjct: 365 ---IQIEIFEETVEHKLDQPTFITEYPTEVSPLARRSD-GNPFVTDRFEFFVGGRELANG 420
Query: 363 FSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLIML 422
FSELNDPE+Q+ RF Q+ K+ + E + +YD DYI ALEYG+PP +G GIG+DRL+ML
Sbjct: 421 FSELNDPEDQAERFMAQVAEKDGGDDE-AMHYDADYIAALEYGLPPTAGEGIGIDRLVML 479
Query: 423 LTNSKNIRDVILFPHLRNE 441
T+S +IRDV+LFPH+R E
Sbjct: 480 FTDSPSIRDVLLFPHMRPE 498
>gi|407893616|ref|ZP_11152646.1| lysyl-tRNA synthetase [Diplorickettsia massiliensis 20B]
Length = 504
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/446 (50%), Positives = 315/446 (70%), Gaps = 16/446 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
+LKR MGK F+ +QD SG KIQ+Y+ E + KN D+GDI+G G +F+
Sbjct: 71 LLKRDMGKSLFLDIQDMSG-----KIQVYVKKENLLDGSIEAVKNLDLGDIVGVYGYVFR 125
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLS--NQEIKYRHRYIDLIINENTRKVFKKRT 118
T T +LSIK L+L+TKSLRPLP+KF LS ++E +YR RY+DL+ +E T++ F+ R+
Sbjct: 126 TKTNQLSIKAERLELLTKSLRPLPDKFHGLSTSDKEQRYRQRYLDLMTDEKTQQTFRIRS 185
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q++ IR F+ + F+EVETP++H PGGA+A+PF+THHN+L+M++FLR+APEL+LKRL+
Sbjct: 186 QLVQEIRQFLNERGFLEVETPMMHALPGGALARPFVTHHNTLDMELFLRVAPELHLKRLV 245
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GG K++EIN+NFRNEGIS RHNPEFTM+EFY AY +Y LM TE++++++
Sbjct: 246 VGGIEKVYEINRNFRNEGISTRHNPEFTMLEFYQAYADYHDLMDLTEQLLRQLAQTIFNK 305
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYN--EIDLQNKLFLKSELKKINPKFNQKK 296
KIDYQG +D SK F++L+++EAI + PQ++ E+ + L +++ K+ P+ Q +
Sbjct: 306 AKIDYQGETIDLSKPFQRLSVLEAIHAFNPQWSLEELTTLSSLQAIAQMLKLKPEVVQSQ 365
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
+ LQ LFEET E KL PT+IT +P E+SPLAR+ N +N N+ +RFEL+I G
Sbjct: 366 SIGK-----LQFALFEETVEEKLKEPTFITEHPIEVSPLARR-NSQNPNLADRFELYIAG 419
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELNDPE+Q+ RF Q K E + YD DYI ALEYG+PP +G GIG+
Sbjct: 420 RELANGFSELNDPEDQAARFAEQSRAKM-AGDEEAMPYDKDYIVALEYGLPPTAGEGIGI 478
Query: 417 DRLIMLLTNSKNIRDVILFPHLRNEN 442
DRL ML T++ +IRDVILFP LR E+
Sbjct: 479 DRLTMLFTDAPSIRDVILFPLLRPED 504
>gi|289675204|ref|ZP_06496094.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. syringae FF5]
gi|424071159|ref|ZP_17808585.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. avellanae str.
ISPaVe037]
gi|407999470|gb|EKG39854.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. avellanae str.
ISPaVe037]
Length = 500
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 221/441 (50%), Positives = 316/441 (71%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + + + K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLPEETLAEVKTWDLGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L ++++S++L+TKSLRPLP+K L++ E +YR RY+DLI+NE R+ F+ R+
Sbjct: 124 ARSGKGDLYVEMTSVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEEVRETFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ K DF+EVETP+L PGGA AKPF THHN+L+M+MFLRIAPELYLKRL+
Sbjct: 184 QVIAHIRSFLMKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +GT
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGT 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DLQ+ ++ KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTAADLQDIDKARAIAKKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+ N EN N+T+RFELFI G E
Sbjct: 359 GFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDENPNVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF+ Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFQAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLT+S +IRDVILFPH+R
Sbjct: 477 LVMLLTDSPSIRDVILFPHMR 497
>gi|429212214|ref|ZP_19203379.1| lysyl-tRNA synthetase [Pseudomonas sp. M1]
gi|428156696|gb|EKX03244.1| lysyl-tRNA synthetase [Pseudomonas sp. M1]
Length = 501
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 222/441 (50%), Positives = 312/441 (70%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I +FI+LQD+S ++Q+Y++ + + + + K +D+GDIIGA+GTL
Sbjct: 70 KVAGRIMLNRGAFIVLQDSSD-----RLQVYVNRKTLPEETLAEIKTWDLGDIIGAEGTL 124
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L + +SS++L+TKSLRPLP+K L++ E +YR RY+DLI+NE TR F+ R+
Sbjct: 125 ARSGKGDLYVDMSSVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEETRHTFRVRS 184
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ + F+EVETP+L PGGA AKPF THHN+L+M MFLRIAPELYLKRL+
Sbjct: 185 QVIAHIRRFLSERGFLEVETPMLQTIPGGAAAKPFATHHNALDMAMFLRIAPELYLKRLV 244
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +GT
Sbjct: 245 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQAVLGT 304
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ +AI KY P DLQ+ + KK K+L
Sbjct: 305 TDVPYGDKVFHFGEPFARLSVFDAILKYNPDITAADLQDVEKAREIAKKAG-----AKVL 359
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
+ LQ+M+FEE E KL P +IT YP E+SPLAR+ N + ++T+RFELFI G E
Sbjct: 360 GHEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDRDPSVTDRFELFIGGRE 418
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + +YD D+I+ALEYGMPP +G GIG+DR
Sbjct: 419 IANAYSELNDAEDQAERFMLQVKEKDAGDDE-AMHYDADFINALEYGMPPTAGEGIGIDR 477
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 478 LVMLLTNSPSIRDVILFPHMR 498
>gi|440720381|ref|ZP_20900799.1| lysyl-tRNA ligase [Pseudomonas syringae BRIP34876]
gi|440726509|ref|ZP_20906762.1| lysyl-tRNA ligase [Pseudomonas syringae BRIP34881]
gi|440365906|gb|ELQ02993.1| lysyl-tRNA ligase [Pseudomonas syringae BRIP34876]
gi|440366091|gb|ELQ03176.1| lysyl-tRNA ligase [Pseudomonas syringae BRIP34881]
Length = 500
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 221/441 (50%), Positives = 316/441 (71%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + + + K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLPEQTLAEVKTWDLGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L ++++S++L+TKSLRPLP+K L++ E +YR RY+DLI+NE R+ F+ R+
Sbjct: 124 ARSGKGDLYVEMTSVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEEVRETFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ K DF+EVETP+L PGGA AKPF THHN+L+M+MFLRIAPELYLKRL+
Sbjct: 184 QVIAHIRSFLMKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +GT
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGT 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DLQ+ ++ KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTAADLQDIDKARAIAKKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+ N EN N+T+RFELFI G E
Sbjct: 359 GFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDENPNVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF+ Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFQAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLT+S +IRDVILFPH+R
Sbjct: 477 LVMLLTDSPSIRDVILFPHMR 497
>gi|424066505|ref|ZP_17803969.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. avellanae str.
ISPaVe013]
gi|408002238|gb|EKG42500.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. avellanae str.
ISPaVe013]
Length = 500
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 221/441 (50%), Positives = 316/441 (71%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + + + K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLPEETLAEVKTWDLGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L ++++S++L+TKSLRPLP+K L++ E +YR RY+DLI+NE R+ F+ R+
Sbjct: 124 ARSGKGDLYVEMTSVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEEVRETFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ K DF+EVETP+L PGGA AKPF THHN+L+M+MFLRIAPELYLKRL+
Sbjct: 184 QVIAHIRSFLMKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +GT
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGT 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DLQ+ ++ KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTAADLQDIDKARAIAKKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+ N EN N+T+RFELFI G E
Sbjct: 359 GFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDENPNVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF+ Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFQAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLT+S +IRDVILFPH+R
Sbjct: 477 LVMLLTDSPSIRDVILFPHMR 497
>gi|416229140|ref|ZP_11627929.1| lysyl-tRNA synthetase [Moraxella catarrhalis 46P47B1]
gi|326562874|gb|EGE13161.1| lysyl-tRNA synthetase [Moraxella catarrhalis 46P47B1]
Length = 507
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 216/441 (48%), Positives = 315/441 (71%), Gaps = 21/441 (4%)
Query: 5 VMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTNTG 64
++ + SFI++QD + +IQLY+ + + K+ D+GDI+ A G + ++ G
Sbjct: 82 ILNRGSFIVIQDMTD-----RIQLYVDRKGLPSETLELIKSLDLGDIVAASGYIGRSGKG 136
Query: 65 ELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIISSI 124
+L + + + +L+TKSLRPLP+KF L++ E+KYR RY+DL++NE TR F R ++++ I
Sbjct: 137 DLYVHLEAFELLTKSLRPLPDKFHGLTDTEVKYRKRYLDLMVNEETRNTFAIRAKVVAGI 196
Query: 125 RHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGFNK 184
R F+ + FMEVETP++H PGGA A+PF+THHN+L+M+++LRIAPELYLKRL++GGF++
Sbjct: 197 RAFLTQERFMEVETPMMHVIPGGASARPFVTHHNALDMQLYLRIAPELYLKRLVVGGFDR 256
Query: 185 IFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKIDYQ 244
+FEIN+NFRNEG+S RHNPEFTMIEFY AY +Y LM TE+M++ + MD +G+T + YQ
Sbjct: 257 VFEINRNFRNEGVSTRHNPEFTMIEFYQAYADYKDLMALTERMLETLAMDILGSTDVSYQ 316
Query: 245 GRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFL----KSELKK-INPKFNQKKILN 299
G + F F+K+T+ +AI +Y ++ D+ ++ FL K ELK+ + P F K
Sbjct: 317 GEVFSFKGPFKKITMFDAILEYNSDFSADDINDREFLAKFVKDELKQEVKPSFGLGK--- 373
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
LQ ++FEET ETKL PT+IT YP E SPLAR+ N N ++T+RFE+FI G E+
Sbjct: 374 ------LQTIVFEETVETKLRQPTFITEYPAETSPLARR-NDTNPHVTDRFEMFIGGREL 426
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
ANGFSELNDP +Q+ RF+ Q+ K+ + E + +YD D+I ALEYG+PP +G GIG+DRL
Sbjct: 427 ANGFSELNDPIDQAERFRAQVAEKDAGDDE-AMHYDADFIEALEYGLPPTAGEGIGIDRL 485
Query: 420 IMLLTNSKNIRDVILFPHLRN 440
+ML ++ +IRDVILFPH+R+
Sbjct: 486 VMLFADAASIRDVILFPHMRH 506
>gi|410654864|ref|YP_006957381.1| Lysyl-tRNA synthetase (class II) [Salmonella enterica subsp.
salamae]
gi|389597586|gb|AFK90335.1| Lysyl-tRNA synthetase (class II) [Salmonella enterica subsp.
salamae]
Length = 499
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 222/438 (50%), Positives = 307/438 (70%), Gaps = 13/438 (2%)
Query: 4 RVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDF-KNYDIGDIIGAKGTLFKTN 62
R MGK SF+ LQD G+IQLY+S++ + + Y + + +D+GDI G +GTLFKT
Sbjct: 72 RHMGKASFVTLQDM-----GGRIQLYVSDDSLPRGSYENLLQQWDLGDICGTRGTLFKTK 126
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
TGEL+++ + L ++TK+LRPLP+KF L +QE +YR RY+DLI N+N+R FK R+Q+++
Sbjct: 127 TGELTVRCTYLGILTKALRPLPDKFHGLQDQEARYRQRYLDLISNDNSRNTFKLRSQLLA 186
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
IR FM FMEVETP++ PGGA A+PFITHHN+L+M M+LRIAPELYLKRL++GGF
Sbjct: 187 GIRQFMVSRGFMEVETPMMQVIPGGASARPFITHHNALDMDMYLRIAPELYLKRLVVGGF 246
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
++FEIN+NFRNEGIS RHNPEFTM+E Y AY +Y L++ TE + + + + +G TK+
Sbjct: 247 ERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQNILGNTKVP 306
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNNLK 302
Y + DF K FEKLT+ EAI KY P+ +L + ++ + I + + +
Sbjct: 307 YGDDVFDFGKPFEKLTMREAIMKYRPETRMAELDDFNSARAIAESIGIRVEKSWGTGRVV 366
Query: 303 KDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIANG 362
+I F+E E+ L PT++T YP E+SPLAR++++ N IT+RFE FI G EI NG
Sbjct: 367 TEI-----FDEIVESHLIQPTFVTEYPAEVSPLARRNDV-NPEITDRFEFFIGGREIGNG 420
Query: 363 FSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLIML 422
FSELND E+Q+ RF Q+ K + E + YYD DY+ ALEYG+PP +G GIG+DR+IML
Sbjct: 421 FSELNDAEDQAQRFMAQVAAKKAGDDE-AMYYDEDYVMALEYGLPPTAGLGIGIDRMIML 479
Query: 423 LTNSKNIRDVILFPHLRN 440
TNS +IRDVILFP +R+
Sbjct: 480 FTNSPSIRDVILFPAMRH 497
>gi|433676517|ref|ZP_20508617.1| lysyl-tRNA synthetase [Xanthomonas translucens pv. translucens DSM
18974]
gi|430818379|emb|CCP38920.1| lysyl-tRNA synthetase [Xanthomonas translucens pv. translucens DSM
18974]
Length = 505
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 217/445 (48%), Positives = 310/445 (69%), Gaps = 21/445 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
+ KRVMGK SF+ LQD SG +IQL++ +G Y FK +DIGDIIG +G L +
Sbjct: 77 LAKRVMGKASFVQLQDESG-----RIQLFLQANALGPA-YDAFKGWDIGDIIGVEGGLTR 130
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS++ S+L+L+TK+LRPLP+K+ LS+ E +YR RY+DLI++ R+VF KR++I
Sbjct: 131 TKTGELSVRASALRLLTKALRPLPDKWHGLSDVEQRYRQRYVDLIVSPEAREVFVKRSRI 190
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I ++R +++ F+EVETP++H PGGA AKPF THHN+L++ ++LR+APELYLKRL++G
Sbjct: 191 IRAMRAWLDARRFLEVETPMMHYIPGGATAKPFTTHHNALDLDLYLRVAPELYLKRLVVG 250
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G +++EIN+NFRNEG+S RHNPEFTM+E Y AY Y +M TE +I+ + + +GTT+
Sbjct: 251 GLERVYEINRNFRNEGVSTRHNPEFTMMELYEAYATYHEVMDLTESVIRDVAQEVLGTTQ 310
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNK--LFLKSELKKIN--PKFNQKK 296
+ + G +D + +F + + EA++ + P+ + D ++ L E KI P + K
Sbjct: 311 VHWDGADIDLAPAFRRWRMDEAVRHHNPEISAADCTDRDALLRHCERLKIRTKPSYGWGK 370
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
+L L +FE T E L PT+IT++P E+SPLAR S+ E T+RFELF+ G
Sbjct: 371 LL---------LEIFEATVEHTLIQPTFITDHPVEVSPLARSSDTE-PGYTDRFELFVNG 420
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
EIANGFSELNDPE+Q+ RF+ Q+ K + E + ++D DYI ALE G+PP G GIG+
Sbjct: 421 KEIANGFSELNDPEDQAARFQAQVAAKEGGDDE-AMHFDADYIRALEVGLPPTGGLGIGI 479
Query: 417 DRLIMLLTNSKNIRDVILFPHLRNE 441
DRL+MLLT S +IRDV+LFP++R E
Sbjct: 480 DRLVMLLTGSSSIRDVLLFPYMRPE 504
>gi|296113238|ref|YP_003627176.1| lysyl-tRNA synthetase [Moraxella catarrhalis RH4]
gi|416217904|ref|ZP_11624572.1| lysyl-tRNA synthetase [Moraxella catarrhalis 7169]
gi|416240154|ref|ZP_11632269.1| lysyl-tRNA synthetase [Moraxella catarrhalis BC1]
gi|416242413|ref|ZP_11633449.1| lysyl-tRNA synthetase [Moraxella catarrhalis BC7]
gi|416247022|ref|ZP_11635391.1| lysyl-tRNA synthetase [Moraxella catarrhalis BC8]
gi|416255181|ref|ZP_11639057.1| lysyl-tRNA synthetase [Moraxella catarrhalis O35E]
gi|421780047|ref|ZP_16216537.1| lysyl-tRNA synthetase [Moraxella catarrhalis RH4]
gi|295920932|gb|ADG61283.1| lysyl-tRNA synthetase [Moraxella catarrhalis BBH18]
gi|326560229|gb|EGE10617.1| lysyl-tRNA synthetase [Moraxella catarrhalis 7169]
gi|326566453|gb|EGE16603.1| lysyl-tRNA synthetase [Moraxella catarrhalis BC1]
gi|326570260|gb|EGE20305.1| lysyl-tRNA synthetase [Moraxella catarrhalis BC8]
gi|326570997|gb|EGE21021.1| lysyl-tRNA synthetase [Moraxella catarrhalis BC7]
gi|326576889|gb|EGE26795.1| lysyl-tRNA synthetase [Moraxella catarrhalis O35E]
gi|407812841|gb|EKF83625.1| lysyl-tRNA synthetase [Moraxella catarrhalis RH4]
Length = 507
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 218/447 (48%), Positives = 317/447 (70%), Gaps = 26/447 (5%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G++ SFI++QD + +IQLY+ + + K+ D+GDI+ A G +
Sbjct: 76 KVAGRVMLNRGSFIVIQDMTD-----RIQLYVDRKGLPSETLELIKSLDLGDIVAASGYI 130
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L + + + +L+TKSLRPLP+KF L++ E+KYR RY+DL++NE TR F R
Sbjct: 131 GRSGKGDLYVHLEAFELLTKSLRPLPDKFHGLTDTEVKYRKRYLDLMVNEETRNTFAIRA 190
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
++++ IR F+ + FMEVETP++H PGGA A+PF+THHN+L+M+++LRIAPELYLKRL+
Sbjct: 191 KVVAGIRAFLTQERFMEVETPMMHVIPGGASARPFVTHHNALDMQLYLRIAPELYLKRLV 250
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF+++FEIN+NFRNEG+S RHNPEFTMIEFY AY +Y LM TE+M++ + MD +G+
Sbjct: 251 VGGFDRVFEINRNFRNEGVSTRHNPEFTMIEFYQAYADYKDLMALTERMLETLAMDILGS 310
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFL----KSELKK-INPKFN 293
T + YQG + F F+K+T+ +AI +Y ++ D+ ++ FL K ELK+ + P F
Sbjct: 311 TDVSYQGEVFSFKGPFKKITMFDAILEYNSDFSADDINDREFLAKFVKDELKQEVKPSFG 370
Query: 294 QKKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELF 353
K LQ ++FEET ETKL PT+IT YP E SPLAR+ N N ++T+RFE+F
Sbjct: 371 LGK---------LQTIVFEETVETKLRQPTFITEYPAETSPLARR-NDTNPHVTDRFEMF 420
Query: 354 IIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCG 413
I G E+ANGFSELNDP +Q+ RF+ Q+ K+ + E + +YD D+I ALEYG+PP +G G
Sbjct: 421 IGGRELANGFSELNDPIDQAERFRAQVAEKDAGDDE-AMHYDADFIEALEYGLPPTAGEG 479
Query: 414 IGVDRLIMLLTNSKNIRDVILFPHLRN 440
IG+DRL+ML ++ +IRDVILFPH+R+
Sbjct: 480 IGIDRLVMLFADAASIRDVILFPHMRH 506
>gi|416157983|ref|ZP_11605422.1| lysyl-tRNA synthetase [Moraxella catarrhalis 101P30B1]
gi|416249636|ref|ZP_11636733.1| lysyl-tRNA synthetase [Moraxella catarrhalis CO72]
gi|326573293|gb|EGE23261.1| lysyl-tRNA synthetase [Moraxella catarrhalis 101P30B1]
gi|326575808|gb|EGE25731.1| lysyl-tRNA synthetase [Moraxella catarrhalis CO72]
Length = 507
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 218/450 (48%), Positives = 318/450 (70%), Gaps = 26/450 (5%)
Query: 1 MLKRVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAK 55
M +V G++ SFI++QD + +IQLY+ + + K+ D+GDI+ A
Sbjct: 73 MYAKVAGRVMLNRGSFIVIQDMTD-----RIQLYVDRKGLPSETLELIKSLDLGDIVAAS 127
Query: 56 GTLFKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFK 115
G + ++ G+L + + + +L+TKSLRPLP+KF L++ E+KYR RY+DL++NE TR F
Sbjct: 128 GYIGRSGKGDLYVHLEAFELLTKSLRPLPDKFHGLTDTEVKYRKRYLDLMVNEETRNTFA 187
Query: 116 KRTQIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLK 175
R ++++ IR F+ + FMEVETP++H PGGA A+PF+THHN+L+M+++LRIAPELYLK
Sbjct: 188 IRAKVVAGIRAFLTQERFMEVETPMMHVIPGGASARPFVTHHNALDMQLYLRIAPELYLK 247
Query: 176 RLIIGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDC 235
RL++GGF+++FEIN+NFRNEG+S RHNPEFTMIEFY AY +Y LM TE+M++ + MD
Sbjct: 248 RLVVGGFDRVFEINRNFRNEGVSTRHNPEFTMIEFYQAYADYKDLMALTERMLETLAMDI 307
Query: 236 IGTTKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFL----KSELKK-INP 290
+G+T + YQG + F F+K+T+ +AI ++ ++ D+ ++ FL K ELK+ + P
Sbjct: 308 LGSTDVSYQGEVFSFKGPFKKITMFDAILEHNSDFSADDINDREFLAKFVKDELKQEVKP 367
Query: 291 KFNQKKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERF 350
F K LQ ++FEET ETKL PT+IT YP E SPLAR+ N N ++T+RF
Sbjct: 368 SFGLGK---------LQTIVFEETVETKLRQPTFITEYPAETSPLARR-NDTNPHVTDRF 417
Query: 351 ELFIIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPAS 410
E+FI G E+ANGFSELNDP +Q+ RF+ Q+ K+ + E + +YD D+I ALEYG+PP +
Sbjct: 418 EMFIGGRELANGFSELNDPIDQAERFRAQVAEKDAGDDE-AMHYDADFIEALEYGLPPTA 476
Query: 411 GCGIGVDRLIMLLTNSKNIRDVILFPHLRN 440
G GIG+DRL+ML ++ +IRDVILFPH+R+
Sbjct: 477 GEGIGIDRLVMLFADAASIRDVILFPHMRH 506
>gi|422645618|ref|ZP_16708753.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. maculicola str.
ES4326]
gi|330959167|gb|EGH59427.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. maculicola str.
ES4326]
Length = 500
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 220/441 (49%), Positives = 317/441 (71%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + + + K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLPEETLAEVKTWDLGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L ++++S++L+TKSLRPLP+K L++ E +YR RY+DLI+NE+ R+ F+ R+
Sbjct: 124 ARSGKGDLYVEMTSVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEDVRETFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ K DF+EVETP+L PGGA AKPF THHN+L+M+MFLRIAPELYLKRL+
Sbjct: 184 QVIAHIRSFLMKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGS 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DLQ+ ++ KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTAADLQDVDKARAIAKKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+ N EN ++T+RFELFI G E
Sbjct: 359 GFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDENPSVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF+ Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFQAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 477 LVMLLTNSPSIRDVILFPHMR 497
>gi|422671251|ref|ZP_16730617.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. aceris str.
M302273]
gi|330968991|gb|EGH69057.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. aceris str.
M302273]
Length = 500
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 221/441 (50%), Positives = 316/441 (71%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + + + K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLPEETLAEVKTWDLGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L ++++S++L+TKSLRPLP+K L++ E +YR RY+DLI+NE R+ F+ R+
Sbjct: 124 ARSGKGDLYVEMTSVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEEVRETFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ K DF+EVETP+L PGGA AKPF THHN+L+M+MFLRIAPELYLKRL+
Sbjct: 184 QVIAHIRSFLMKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGS 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DLQ+ ++ KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTAADLQDIDKARAIAKKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+ N EN N+T+RFELFI G E
Sbjct: 359 GFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDENPNVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF+ Q+ K+ + E + +YD D++ ALEYGMPP +G GIGVDR
Sbjct: 418 IANAYSELNDAEDQAERFQAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGVDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLT+S +IRDVILFPH+R
Sbjct: 477 LVMLLTDSPSIRDVILFPHMR 497
>gi|416025694|ref|ZP_11569342.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. race
4]
gi|422404728|ref|ZP_16481779.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. race
4]
gi|320329577|gb|EFW85566.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. race
4]
gi|330878327|gb|EGH12476.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. race
4]
Length = 500
Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust.
Identities = 219/441 (49%), Positives = 316/441 (71%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + + + K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLAEETLAEVKTWDLGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L +++++++L+TKSLRPLP+K L++ E +YR RY+DLI+NE+ R+ F+ R+
Sbjct: 124 ARSGKGDLYVEMTTVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEDVRETFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ K DF+EVETP+L PGGA AKPF THHN+L+M+MFLRIAPELYLKRL+
Sbjct: 184 QVIAHIRSFLMKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +GT
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGT 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P DLQ+ ++ KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPDLTAADLQDVDKARAIAKKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+ N EN ++T+RFELFI G E
Sbjct: 359 GFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDENPSVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF+ Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFQAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLT+S +IRDVILFPH+R
Sbjct: 477 LVMLLTDSPSIRDVILFPHMR 497
>gi|410089127|ref|ZP_11285755.1| lysyl-tRNA ligase [Pseudomonas viridiflava UASWS0038]
gi|409763654|gb|EKN48610.1| lysyl-tRNA ligase [Pseudomonas viridiflava UASWS0038]
Length = 500
Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust.
Identities = 220/441 (49%), Positives = 317/441 (71%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + + + K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLPEETLAEVKTWDLGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L ++++S++L+TKSLRPLP+K L++ E +YR RY+DLI+NE+ R+ F+ R+
Sbjct: 124 ARSGKGDLYVEMTSVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEDVRETFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ K DF+EVETP+L PGGA AKPF THHN+L+M+MFLRIAPELYLKRL+
Sbjct: 184 QVIAHIRSFLMKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +GT
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGT 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DLQ+ ++ KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTAADLQDIDKARAIAKKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+ N +N ++T+RFELFI G E
Sbjct: 359 GFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDDNPSVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF+ Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFQAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 477 LVMLLTNSPSIRDVILFPHMR 497
>gi|380512648|ref|ZP_09856055.1| lysyl-tRNA synthetase [Xanthomonas sacchari NCPPB 4393]
Length = 505
Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust.
Identities = 216/445 (48%), Positives = 310/445 (69%), Gaps = 21/445 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
+ KRVMGK SF+ LQD SG +IQL++ +G+ Y FK +DIGDIIG +G L +
Sbjct: 77 LAKRVMGKASFVQLQDESG-----RIQLFLQANALGEA-YDAFKGWDIGDIIGVEGGLTR 130
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELSIK + L+L+TK+LRPLP+K+ LS+ E +YR RY+DLI++ R+VF KR++I
Sbjct: 131 TKTGELSIKATGLRLLTKALRPLPDKWHGLSDVEQRYRQRYVDLIVSPEAREVFVKRSKI 190
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I ++R +++ F+EVETP++H PGGA AKPF THHN+L++ ++LR+APELYLKRL++G
Sbjct: 191 IRAMRAWLDARRFLEVETPMMHYIPGGATAKPFTTHHNALDLDLYLRVAPELYLKRLVVG 250
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G +++EIN+NFRNEG+S RHNPEFTM+E Y AY Y +M TE +I+ + + +GTT+
Sbjct: 251 GLERVYEINRNFRNEGVSTRHNPEFTMMELYEAYATYHEVMDLTENVIRDVAREVLGTTQ 310
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKI----NPKFNQKK 296
+ + G +D + +F + + EA++ + P+ + D ++ L +++ P + K
Sbjct: 311 VHWDGADIDLAPAFRRWRMDEAVRHHNPEISAADCTDREALLRHCERLKIRTKPSYGWGK 370
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
+L L +FE T E L PT+IT++P E+SPLAR S+ E T+RFELFI G
Sbjct: 371 LL---------LEIFEATVEHTLIQPTFITDHPVEVSPLARSSDTE-PGYTDRFELFING 420
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
EIANGFSELNDPE+Q+ RF+ Q+ K + E + ++D DYI ALE G+PP G GIG+
Sbjct: 421 KEIANGFSELNDPEDQAARFQAQVAAKEGGDDE-AMHFDADYIRALEVGLPPTGGLGIGI 479
Query: 417 DRLIMLLTNSKNIRDVILFPHLRNE 441
DRL+MLLT S +IRDV+LFP++R E
Sbjct: 480 DRLVMLLTGSSSIRDVLLFPYMRPE 504
>gi|317493836|ref|ZP_07952253.1| lysyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
gi|365836520|ref|ZP_09377910.1| lysine--tRNA ligase [Hafnia alvei ATCC 51873]
gi|316918163|gb|EFV39505.1| lysyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
gi|364563788|gb|EHM41580.1| lysine--tRNA ligase [Hafnia alvei ATCC 51873]
Length = 505
Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust.
Identities = 219/440 (49%), Positives = 310/440 (70%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK +F+ LQD G +IQLY++ + + + LY D FK +D+GDIIGA+G +F
Sbjct: 75 MTRRIMGKAAFVTLQDMGG-----RIQLYVARDDLPEGLYNDQFKKWDLGDIIGARGKVF 129
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
+T TGELSI + ++L+TK+LRPLP+KF L++QE +YR RY+DLI NE +R+ F+ R++
Sbjct: 130 RTQTGELSIHCTEIRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANEESRETFRIRSK 189
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 190 TLAAIRSFMVNKGFMEVETPMMQVIPGGASARPFITHHNALDIDMYLRIAPELYLKRLVV 249
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEG+SPRHNPEFTM+E Y AY +Y L+ TE + + + + +G++
Sbjct: 250 GGFERVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYKDLIVLTEDLFRTLTQEVLGSS 309
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y + DF K F K+T+ E+I Y P DL + + + K + L
Sbjct: 310 IVQYGDQTFDFGKPFIKMTMKESINHYRPDIKMEDLDDLEKATKIAESLGIKIEKSWGLG 369
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+Q +F+ET E L PT+IT YP E+SPLAR+ N +N IT+RFE FI G EI
Sbjct: 370 R-----IQCEIFDETAEKNLIQPTFITEYPAEVSPLARR-NDDNPFITDRFEFFIGGREI 423
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF++Q+ K+E + E + +YD DY+ +LE+G+PP +G GIG+DR+
Sbjct: 424 GNGFSELNDAEDQAERFQDQVRAKDEGDDE-AMFYDEDYVTSLEHGLPPTAGLGIGIDRM 482
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML TNS IRDVILFP +R
Sbjct: 483 MMLFTNSHTIRDVILFPAMR 502
>gi|71733658|ref|YP_276011.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola 1448A]
gi|123747561|sp|Q48F26.1|SYK_PSE14 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|71554211|gb|AAZ33422.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola 1448A]
Length = 500
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 219/441 (49%), Positives = 316/441 (71%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + + + K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLAEETLAEVKTWDLGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L +++++++L+TKSLRPLP+K L++ E +YR RY+DLI+NE+ R+ F+ R+
Sbjct: 124 ARSGKGDLYVEMTTVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEDVRETFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ K DF+EVETP+L PGGA AKPF THHN+L+M+MFLRIAPELYLKRL+
Sbjct: 184 QVIAHIRSFLMKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +GT
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGT 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P DLQ+ ++ KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPDLTAADLQDVDKARAIAKKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+ N EN ++T+RFELFI G E
Sbjct: 359 GFEGLGKLQVMIFEELVEHKLKQPHFITQYPFEVSPLARR-NDENPSVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF+ Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFQAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLT+S +IRDVILFPH+R
Sbjct: 477 LVMLLTDSPSIRDVILFPHMR 497
>gi|422616438|ref|ZP_16685144.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. japonica str.
M301072]
gi|330896020|gb|EGH28243.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. japonica str.
M301072]
Length = 500
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 221/441 (50%), Positives = 315/441 (71%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + + + K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLPEETLAEVKTWDLGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L ++++S++L+TKSLRPLP+K L++ E +YR RY+DLI+NE R+ F+ R+
Sbjct: 124 ARSGKGDLYVEMTSVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEEVRETFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ K DF+EVETP+L PGGA AKPF THHN L+M+MFLRIAPELYLKRL+
Sbjct: 184 QVIAHIRSFLMKRDFLEVETPMLQTIPGGAAAKPFETHHNPLDMEMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +GT
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGT 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DLQ+ ++ KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTAADLQDIDKARAIAKKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+ N EN N+T+RFELFI G E
Sbjct: 359 GFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDENPNVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF+ Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFQAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLT+S +IRDVILFPH+R
Sbjct: 477 LVMLLTDSPSIRDVILFPHMR 497
>gi|359781992|ref|ZP_09285215.1| lysyl-tRNA synthetase [Pseudomonas psychrotolerans L19]
gi|359370362|gb|EHK70930.1| lysyl-tRNA synthetase [Pseudomonas psychrotolerans L19]
Length = 500
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 222/441 (50%), Positives = 312/441 (70%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I +F++LQDTSG +IQ+Y+ + + K +D+GDII +GTL
Sbjct: 70 KVAGRIMLNRGAFMVLQDTSG-----RIQVYVDRKTLPAETLEAVKTWDLGDIIATEGTL 124
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L + +S ++L+TKSLRPLP+K L++ E++YR RY+DLI+NE R+ F+ R+
Sbjct: 125 ARSGKGDLYVNMSDVRLLTKSLRPLPDKHHGLTDTELRYRQRYVDLIVNEEVRQTFRVRS 184
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ + F+EVETP+L PGGA AKPF THHN+L+M MFLRIAPELYLKRL+
Sbjct: 185 QVIAHIRRFLMERGFLEVETPMLQTIPGGAAAKPFETHHNALDMAMFLRIAPELYLKRLV 244
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ M +GT
Sbjct: 245 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYRDNMDLTEELFRELAMAVLGT 304
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P DLQ+ ++ KK K+L
Sbjct: 305 TDVPYGDKVFHFGEPFVRLSVYDSILKYNPDITAEDLQDVEKARAIAKKAG-----AKVL 359
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
+ LQ+M+FEE E+KL P +IT YP E+SPLAR+ N EN ++T+RFELFI G E
Sbjct: 360 GHEGLGKLQVMIFEELVESKLEQPHFITEYPFEVSPLARR-NDENPSVTDRFELFIGGRE 418
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + +YD D+I+ALEYGMPP +G GIG+DR
Sbjct: 419 IANAYSELNDAEDQAERFMLQVQEKDAGDDE-AMHYDADFINALEYGMPPTAGEGIGIDR 477
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 478 LVMLLTNSPSIRDVILFPHMR 498
>gi|319787301|ref|YP_004146776.1| lysyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
gi|317465813|gb|ADV27545.1| lysyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
Length = 509
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 214/443 (48%), Positives = 310/443 (69%), Gaps = 21/443 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M KRVMGK SF + D SG +IQL++ ++G+ Y FK++DIGDI+ +G L +
Sbjct: 79 MAKRVMGKASFAQVMDESG-----RIQLFLQGNVLGEA-YEAFKSFDIGDIVAVEGGLTR 132
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+K +SL+L+ KSLRPLP+K+ LS+ E +YR RY+DLI+ R+VF KR++I
Sbjct: 133 TRTGELSLKATSLRLLVKSLRPLPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFVKRSKI 192
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I +IR ++++ F+EVETP++H PGGA A+PF+THHN+L+++++LR+APELYLKRL++G
Sbjct: 193 IRAIRSWLDERRFLEVETPMMHYIPGGATARPFVTHHNALDLQLYLRVAPELYLKRLVVG 252
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G +++EIN+NFRNEG+S RHNPEFTM+E Y AY Y +M TE +I+ +GTT+
Sbjct: 253 GLERVYEINRNFRNEGVSTRHNPEFTMLELYEAYATYHEVMDLTENVIRDTARSVLGTTE 312
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELK----KINPKFNQKK 296
++++G+ +D +F + + EA++ + P+ + D ++ L + K+ P + K
Sbjct: 313 VEWEGQRIDLGPAFRRWRMDEAVRHHNPEISAADCTDREALLRHCERLGIKVKPAWGWGK 372
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
+L L +FE T E L PT+IT++P E+SPLAR S+ E T+RFELFI G
Sbjct: 373 LL---------LEIFEATVEHTLIQPTFITDHPVEVSPLARASDTE-PGYTDRFELFING 422
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELNDPE+Q+ RF+ Q+ K + E + +YD DYI ALEYGM P G GIG+
Sbjct: 423 KELANGFSELNDPEDQAARFQAQVAAKEGGDDE-AMHYDADYIRALEYGMAPTGGLGIGI 481
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL+MLLT S +IRDV+LFP++R
Sbjct: 482 DRLVMLLTGSTSIRDVLLFPYMR 504
>gi|409397856|ref|ZP_11248714.1| lysyl-tRNA ligase [Pseudomonas sp. Chol1]
gi|409117595|gb|EKM94022.1| lysyl-tRNA ligase [Pseudomonas sp. Chol1]
Length = 500
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 219/443 (49%), Positives = 316/443 (71%), Gaps = 17/443 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I +F++LQD SG +IQ+Y+ +I+ K++D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGAFMVLQDMSG-----RIQVYVDRKILPAEQLEAVKHFDLGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L + ++S++L+TKSLRPLP+KF L++ E +YR RY+DLI+N++ R+ F+ R+
Sbjct: 124 ARSGKGDLYVYMNSVRLLTKSLRPLPDKFHGLTDTEQRYRQRYVDLIMNDDVRETFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ + DF+EVETP+L PGGA AKPF THHN+L+M MFLRIAPELYLKRL+
Sbjct: 184 QVIAHIRQFLRERDFLEVETPMLQTIPGGAAAKPFETHHNALDMPMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF ++FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +GT
Sbjct: 244 VGGFERVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQAVLGT 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I ++ P+ + DL + ++ KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFARLSVFDSILQFNPEISASDLSDLEKARAIAKKAG-----AKLL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
+ LQ+M+FEE E KL PT+IT YP E+SPLAR+ N N N+T+RFELFI G E
Sbjct: 359 GHEGLGKLQVMIFEELVEHKLEQPTFITEYPFEVSPLARR-NDRNPNVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + ++D D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFHAQVADKDAGDDE-AMHFDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLRNE 441
L+MLLTNS +IRDVILFPH+R E
Sbjct: 477 LVMLLTNSPSIRDVILFPHMRPE 499
>gi|421616377|ref|ZP_16057391.1| lysyl-tRNA ligase [Pseudomonas stutzeri KOS6]
gi|409781760|gb|EKN61337.1| lysyl-tRNA ligase [Pseudomonas stutzeri KOS6]
Length = 500
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 222/443 (50%), Positives = 315/443 (71%), Gaps = 17/443 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I F++LQD SG +IQ+Y+ + + + K++D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGPFMVLQDMSG-----RIQVYVDRKTLPADQVEAVKHFDLGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L + +SS++L+TKSLRPLP+KF L++ E +YR RY+DL++NE R+ F+ R+
Sbjct: 124 ARSGKGDLYVYMSSVRLLTKSLRPLPDKFHGLTDTEQRYRQRYVDLMVNEEVRETFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+IS IR F+ + DF+EVETP+L PGGA AKPF THHN+L+M MFLRIAPELYLKRL+
Sbjct: 184 QVISHIRKFLAERDFLEVETPMLQTIPGGAAAKPFETHHNALDMPMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF ++FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 244 VGGFERVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQAVLGS 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I K+ P+ + DL N L E ++ K K+L
Sbjct: 304 TDVPYGDKVFHFGEPFARLSVFDSILKFNPEISASDL-NDL----EKARVLAKKAGAKLL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
+ LQ+M+FEE E KL PT+IT YP E+SPLAR+ N N N+T+RFELFI G E
Sbjct: 359 GHEGLGKLQVMIFEELVEHKLEQPTFITEYPFEVSPLARR-NDRNPNVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + ++D D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFHAQVADKDAGDDE-AMHFDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLRNE 441
L+MLLTNS +IRDVILFPH+R E
Sbjct: 477 LVMLLTNSPSIRDVILFPHMRPE 499
>gi|262274919|ref|ZP_06052730.1| lysyl-tRNA synthetase (class II) [Grimontia hollisae CIP 101886]
gi|262221482|gb|EEY72796.1| lysyl-tRNA synthetase (class II) [Grimontia hollisae CIP 101886]
Length = 504
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 224/446 (50%), Positives = 310/446 (69%), Gaps = 20/446 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
R+M K F+ LQD SG +IQ Y S ++ K L ++ DIGDIIG KG L K+
Sbjct: 68 RIMAKRGPFLALQDVSG-----RIQAYASKDV-QKELKEQYQGLDIGDIIGVKGALHKSG 121
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE++YR RY+DLI+NE++R FK R+++IS
Sbjct: 122 KGDLYVNMEEYQLLTKALRPLPEKFHGLTDQELRYRQRYVDLIVNEDSRNTFKVRSKLIS 181
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR +ME DFMEVETP++ PGGA A+PFITHHN+L+ +MFLRIAPELYLKRL++GGF
Sbjct: 182 AIRRYMESKDFMEVETPMMQVIPGGAAARPFITHHNALDQQMFLRIAPELYLKRLVVGGF 241
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
++FEIN+NFRNEG+SPRHNPEFTMIEFY AY +Y L+ TE M++ + ++ +G T +
Sbjct: 242 ERVFEINRNFRNEGLSPRHNPEFTMIEFYMAYADYNDLIDLTEDMLRTVALEVLGQTSMP 301
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y +DF + ++T++EAIK Y P + +I D+Q++ L + + + +
Sbjct: 302 YGEHTVDFGGKYARMTMLEAIKHYNPDHADIQALTEEDVQDRDKLVAIAESLKIYVEKFW 361
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E KL PT+IT YP ++SPLAR+S+ +N T+RFE FI G
Sbjct: 362 TCGQLLEEI-----FGETAEPKLIQPTFITGYPADVSPLARRSD-DNPFFTDRFEFFIGG 415
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND E+Q RFK Q+D K+ + E + +YD DYI ALE+G+PP +G GIG+
Sbjct: 416 REVANGFSELNDAEDQDARFKAQVDAKDAGDDE-AMFYDADYITALEHGLPPTAGQGIGI 474
Query: 417 DRLIMLLTNSKNIRDVILFPHLRNEN 442
DRL ML TN+ IRDVILFP +R +N
Sbjct: 475 DRLAMLFTNTHTIRDVILFPAMRPQN 500
>gi|429334309|ref|ZP_19214977.1| lysyl-tRNA synthetase [Pseudomonas putida CSV86]
gi|428761017|gb|EKX83263.1| lysyl-tRNA synthetase [Pseudomonas putida CSV86]
Length = 500
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 219/441 (49%), Positives = 314/441 (71%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + + + K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLPEETLAEVKTWDLGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L ++++ ++L+TKSLRPLP+K L++ E +YR RY+DLI+NE+TR+ F+ R+
Sbjct: 124 ARSGKGDLYVEMTRVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEDTRETFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
+IS IR F+ K DF+EVETP+L PGGA AKPF THHN+L+M MFLRIAPELYLKRL+
Sbjct: 184 LVISHIRSFLAKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMPMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +GT
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYTDNMDLTEELFRELAQLVLGT 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F ++++ ++I KY P+ E DL + + +K K+L
Sbjct: 304 TDVPYGDKVFHFGEPFARMSVFDSILKYNPELTEADLLDVDKAREIARKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
+ LQ+M+FEE E+KL P +IT YP E+SPLAR+ N N N+T+RFELFI G E
Sbjct: 359 GHEGLGKLQVMIFEELVESKLEQPHFITEYPFEVSPLARR-NDANPNVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFLAQVAEKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 477 LVMLLTNSPSIRDVILFPHMR 497
>gi|29653775|ref|NP_819467.1| lysyl-tRNA synthetase [Coxiella burnetii RSA 493]
gi|154707035|ref|YP_001424981.1| lysyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
gi|161830462|ref|YP_001596361.1| lysyl-tRNA synthetase [Coxiella burnetii RSA 331]
gi|164686042|ref|ZP_01947471.2| lysyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
gi|165924116|ref|ZP_02219948.1| lysyl-tRNA synthetase [Coxiella burnetii Q321]
gi|212213083|ref|YP_002304019.1| lysyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
gi|212218959|ref|YP_002305746.1| lysyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
gi|39932163|sp|Q83E97.1|SYK_COXBU RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|189082957|sp|A9KEG1.1|SYK_COXBN RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|189082958|sp|A9NBP7.1|SYK_COXBR RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|226710886|sp|B6J8K2.1|SYK_COXB1 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|226710887|sp|B6J1P6.1|SYK_COXB2 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|29541038|gb|AAO89981.1| lysyl-tRNA synthetase [Coxiella burnetii RSA 493]
gi|154356321|gb|ABS77783.1| lysyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
gi|161762329|gb|ABX77971.1| lysyl-tRNA synthetase [Coxiella burnetii RSA 331]
gi|164601597|gb|EAX31910.2| lysyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
gi|165916439|gb|EDR35043.1| lysyl-tRNA synthetase [Coxiella burnetii Q321]
gi|212011493|gb|ACJ18874.1| lysyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
gi|212013221|gb|ACJ20601.1| lysyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
Length = 498
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 220/445 (49%), Positives = 317/445 (71%), Gaps = 22/445 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M +R+MGK SF +QD G++Q+Y++ + + + +Y+DFK++D+GDI+G +G LFK
Sbjct: 70 MTRRIMGKASFAHIQDM-----KGRMQIYVTRDSLPQGVYSDFKSWDLGDIVGIEGELFK 124
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T T ELS+KV ++L+TK+LRP+P+KF L +QE ++R RY+DLI+NE++R +F+ R+Q+
Sbjct: 125 TKTEELSVKVDQIRLLTKALRPMPDKFHGLHDQEQRFRQRYLDLIVNESSRHLFQTRSQV 184
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+ IR F++ ++EVETP++H PGGA A+PF THHN++NM +FLRIAPELYLKRL++G
Sbjct: 185 IAQIRRFLDDRGYIEVETPMMHPLPGGAAARPFETHHNAMNMDLFLRIAPELYLKRLVVG 244
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF K++EIN+NFRNEGIS RHNPEFTM+EFY AY Y +M TE MI+ + G +
Sbjct: 245 GFEKVYEINRNFRNEGISTRHNPEFTMLEFYQAYATYEDMMMLTESMIRHLAEKIFGVME 304
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTP-----QYNEIDLQNKLFLKSELKKINPKFNQK 295
I YQG +D +K F +L++ +AI ++ P Q + ++ +L K E+ +
Sbjct: 305 IKYQGVRIDLNKPFPRLSLRDAILQFNPGITPDQIDHLETARELAHKYEI-ATPAHYGLG 363
Query: 296 KILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFII 355
KI Q LFE+ E KL P +IT++P E+SPL+R +N EN+ IT+RFE ++
Sbjct: 364 KI---------QTELFEKLVEEKLQQPIFITHFPKEVSPLSR-ANEENDFITDRFEFYVG 413
Query: 356 GNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIG 415
G EIANGFSELNDPE+Q+ RF+ Q+ +N + E S +D DYI ALEYG+PP +G GIG
Sbjct: 414 GREIANGFSELNDPEDQAARFREQLKARNAGDLEAMS-FDEDYITALEYGLPPTAGEGIG 472
Query: 416 VDRLIMLLTNSKNIRDVILFPHLRN 440
+DRL+ML T++ +IRDVILFP LR+
Sbjct: 473 IDRLVMLFTDNASIRDVILFPLLRS 497
>gi|289626067|ref|ZP_06459021.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str. NCPPB
3681]
gi|289646234|ref|ZP_06477577.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str. 2250]
gi|422582710|ref|ZP_16657843.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
0893_23]
gi|422594770|ref|ZP_16669060.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
M301315]
gi|422608933|ref|ZP_16680892.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. mori str. 301020]
gi|330867550|gb|EGH02259.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
0893_23]
gi|330894560|gb|EGH27221.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. mori str. 301020]
gi|330985077|gb|EGH83180.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
M301315]
Length = 500
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 219/441 (49%), Positives = 316/441 (71%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + + + K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLPEETLAEVKTWDLGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L +++++++L+TKSLRPLP+K L++ E +YR RY+DLI+NE+ R+ F+ R+
Sbjct: 124 ARSGKGDLYVEMTTVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEDVRETFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ K DF+EVETP+L PGGA AKPF THHN+L+M+MFLRIAPELYLKRL+
Sbjct: 184 QVIAHIRSFLMKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +GT
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGT 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P DLQ+ ++ KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPDLTAADLQDVDKARAIAKKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+ N EN ++T+RFELFI G E
Sbjct: 359 GFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDENPSVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF+ Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFQAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLT+S +IRDVILFPH+R
Sbjct: 477 LVMLLTDSPSIRDVILFPHMR 497
>gi|66044559|ref|YP_234400.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. syringae B728a]
gi|75503030|sp|Q4ZWW0.1|SYK_PSEU2 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|63255266|gb|AAY36362.1| Lysyl-tRNA synthetase, class-2 [Pseudomonas syringae pv. syringae
B728a]
Length = 500
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 220/441 (49%), Positives = 316/441 (71%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + + + K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLPEETLAEVKTWDLGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L ++++S++L+TKSLRPLP+K L++ E +YR RY+DLI+NE R+ F+ R+
Sbjct: 124 ARSGKGDLYVEMTSVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEEVRETFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ K DF+EVETP+L PGGA AKPF THHN+L+M+MFLRIAPELYLKRL+
Sbjct: 184 QVIAHIRSFLMKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGS 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DLQ+ ++ KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTVADLQDIDKARAIAKKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+ N EN N+T+RFELFI G E
Sbjct: 359 GFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDENPNVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF+ Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFQAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLT+S +IRDVILFPH+R
Sbjct: 477 LVMLLTDSPSIRDVILFPHMR 497
>gi|28198321|ref|NP_778635.1| lysyl-tRNA synthetase [Xylella fastidiosa Temecula1]
gi|182680960|ref|YP_001829120.1| lysyl-tRNA synthetase [Xylella fastidiosa M23]
gi|386084481|ref|YP_006000763.1| lysyl-tRNA synthetase [Xylella fastidiosa subsp. fastidiosa GB514]
gi|417558870|ref|ZP_12209829.1| Lysyl-tRNA synthetase class II [Xylella fastidiosa EB92.1]
gi|32130167|sp|Q87EB3.1|SYK_XYLFT RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|238691085|sp|B2I848.1|SYK_XYLF2 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|28056391|gb|AAO28284.1| lysyl-tRNA synthetase [Xylella fastidiosa Temecula1]
gi|182631070|gb|ACB91846.1| lysyl-tRNA synthetase [Xylella fastidiosa M23]
gi|307579428|gb|ADN63397.1| lysyl-tRNA synthetase [Xylella fastidiosa subsp. fastidiosa GB514]
gi|338178452|gb|EGO81438.1| Lysyl-tRNA synthetase class II [Xylella fastidiosa EB92.1]
Length = 506
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 221/443 (49%), Positives = 313/443 (70%), Gaps = 16/443 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M KR+MGK SF +QD SG +IQL I + ++G++ Y FK D+GDII +G L +
Sbjct: 77 MAKRLMGKASFAQIQDESG-----RIQLLIQSNVLGEDSYAAFKVLDVGDIIAVEGGLTR 131
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+KV+ L+L+TK+LRPLP+K+ L++ E +YR RY+DLI+ +R++F KR++I
Sbjct: 132 TRTGELSVKVNVLRLLTKALRPLPDKWHGLTDVEQRYRQRYVDLIVTPESREIFIKRSKI 191
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I ++R +++ F+EVETP++H PGGA AKPF+T+HN+L+++++LR+APELYLKRL++G
Sbjct: 192 IRALRTWLDARLFLEVETPMMHYIPGGAAAKPFVTYHNALDLELYLRVAPELYLKRLVVG 251
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G +++EIN+NFRNEG+S RHNPEFTM+E Y AY+ Y +M E MI+ +GTT+
Sbjct: 252 GLERVYEINRNFRNEGVSTRHNPEFTMLELYEAYSTYHEVMDLAETMIRDTAQSVLGTTQ 311
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYN--EIDLQNKLFLKSELKKINPKFNQKKIL 298
+ + G +D F + + EA+ + P+ + E ++ L L E KI K+
Sbjct: 312 VIWDGAQIDLGPIFRRWRMDEAVCHHNPEMSVAECTDRDALLLHCERLKI-------KVK 364
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
++ L L +FE T E L PT+IT++P EISPLAR+S+IE + T+RFELFI G E
Sbjct: 365 SSYGWGRLLLSIFEATVEHTLIQPTFITDHPVEISPLARESDIE-SGYTDRFELFINGKE 423
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IANGFSELNDPEEQ++RF+ Q++ K + E + YYD DYI ALEYGM P G GIGVDR
Sbjct: 424 IANGFSELNDPEEQAMRFQKQVEAKEGGDDE-AMYYDADYIRALEYGMAPTGGLGIGVDR 482
Query: 419 LIMLLTNSKNIRDVILFPHLRNE 441
L+MLLT S +IRDV+LFP++R E
Sbjct: 483 LVMLLTGSTSIRDVLLFPYMRPE 505
>gi|152995161|ref|YP_001339996.1| lysyl-tRNA synthetase [Marinomonas sp. MWYL1]
gi|150836085|gb|ABR70061.1| lysyl-tRNA synthetase [Marinomonas sp. MWYL1]
Length = 500
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 220/433 (50%), Positives = 308/433 (71%), Gaps = 12/433 (2%)
Query: 10 SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTNTGELSIK 69
+F++LQD +G +IQ Y++ +++ L D K +D+GDIIG G + K+ G+L I
Sbjct: 80 AFMLLQDMTG-----QIQAYVNRKVLSPELLADQKTWDLGDIIGISGPVHKSGKGDLYID 134
Query: 70 VSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIISSIRHFME 129
+ +L+TKSLRPLP+K LS+ E++YR RY+DLI+NE +R+ F+ R++IIS+IR F+E
Sbjct: 135 MHEAQLLTKSLRPLPDKHHGLSDMEMRYRQRYVDLIVNEESRETFQMRSKIISTIRRFLE 194
Query: 130 KNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGFNKIFEIN 189
FMEVETP+L PGGA A+PFITHHN+++M M+LRIAPELYLKRL++GGF ++FEIN
Sbjct: 195 DRRFMEVETPMLQTIPGGASARPFITHHNAMDMSMYLRIAPELYLKRLVVGGFERVFEIN 254
Query: 190 KNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKIDYQGRLLD 249
+NFRNEG S RHNPEFTMIEFY AY +Y LM TE M++ + +GTT + YQG D
Sbjct: 255 RNFRNEGTSTRHNPEFTMIEFYQAYADYKDLMDLTEDMLRTVAEKVLGTTTVTYQGSEYD 314
Query: 250 FSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNNLKKDILQLM 309
F F +++++++I Y P+ DL+ + KK+ K + K I K L
Sbjct: 315 FGAPFVRMSMLDSILHYNPELTAADLETLEGATAVAKKL--KIDVKPIWGLGK---LWTE 369
Query: 310 LFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIANGFSELNDP 369
+FEET E KL PT+IT YP E+SPLAR+ N +N+ IT+RFE F+ G EIANGFSELNDP
Sbjct: 370 IFEETAEHKLDQPTFITEYPAEVSPLARR-NDDNDFITDRFEFFVGGREIANGFSELNDP 428
Query: 370 EEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLIMLLTNSKNI 429
E+Q+ RF Q+ K+ + E + +YD DYI+ALEYG+PP +G GIG+DRL+ML T++ +I
Sbjct: 429 EDQAERFMRQVAEKDAGDDE-AMHYDADYINALEYGLPPTAGEGIGIDRLVMLFTDAPSI 487
Query: 430 RDVILFPHLRNEN 442
RDV+LFPH++ ++
Sbjct: 488 RDVLLFPHMKPQD 500
>gi|299771104|ref|YP_003733130.1| lysyl-tRNA synthetase [Acinetobacter oleivorans DR1]
gi|424740710|ref|ZP_18169089.1| lysine--tRNA ligase [Acinetobacter baumannii WC-141]
gi|298701192|gb|ADI91757.1| lysyl-tRNA synthetase [Acinetobacter oleivorans DR1]
gi|422945501|gb|EKU40453.1| lysine--tRNA ligase [Acinetobacter baumannii WC-141]
Length = 509
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 221/446 (49%), Positives = 318/446 (71%), Gaps = 26/446 (5%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G++ SF+++QD +G +IQLY+ + + K++ K D+GDII A+G +
Sbjct: 76 KVAGRVMLNRGSFMVIQDMTG-----RIQLYVDRKGLPKDILETIKGLDLGDIIAAEGYI 130
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L + + +L+TKSLRPLP+KF L++ E+KYR RY+DLI+NE TRK F+ R
Sbjct: 131 GRSGKGDLYVHLEGFELLTKSLRPLPDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRA 190
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
++++ IR F+ FMEVETP++H PGGA A+PF THHN+L+M +FLRIAPELYLKRL+
Sbjct: 191 KVVAGIRAFLNNERFMEVETPMMHVIPGGASARPFETHHNALDMPLFLRIAPELYLKRLV 250
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF ++FEIN+NFRNEG+S RHNPEFTMIEFY AY +Y LM+ TE M++K+ +D +GT
Sbjct: 251 VGGFERVFEINRNFRNEGVSTRHNPEFTMIEFYQAYADYKDLMQLTENMLEKLALDILGT 310
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFL----KSELK-KINPKFN 293
T + YQG + F F+K+++ +AI + PQ+ ++ ++ FL + ELK ++ P F
Sbjct: 311 TDVPYQGEVFSFKGPFKKISMFDAILENNPQFTPENVGDREFLAQFIREELKEQVKPGFG 370
Query: 294 QKKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELF 353
K LQ ++FEET ETKL PT+IT YP E SPLAR+ N +N +IT+RFE F
Sbjct: 371 LGK---------LQTIVFEETVETKLRQPTFITEYPAETSPLARR-NDDNAHITDRFEFF 420
Query: 354 IIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCG 413
I G E+ANGFSELNDP +Q+ RF+ Q+ K+ + E + +YD +++ ALEYG+PP +G G
Sbjct: 421 IGGRELANGFSELNDPIDQAERFQAQVAEKDAGDDE-AMHYDAEFVEALEYGLPPTAGEG 479
Query: 414 IGVDRLIMLLTNSKNIRDVILFPHLR 439
IG+DRL+ML ++ +IRDVILFPH+R
Sbjct: 480 IGIDRLVMLFADAPSIRDVILFPHMR 505
>gi|443469562|ref|ZP_21059716.1| Lysyl-tRNA synthetase (class II) [Pseudomonas pseudoalcaligenes
KF707]
gi|442899014|gb|ELS25545.1| Lysyl-tRNA synthetase (class II) [Pseudomonas pseudoalcaligenes
KF707]
Length = 501
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 219/441 (49%), Positives = 312/441 (70%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SFI+LQD S ++Q+Y++ + + + + K +D+GDIIGA+GT+
Sbjct: 70 KVAGRIMLNRGSFIVLQD-----STSRLQVYVNRKTLPEETLAEIKTWDLGDIIGAEGTV 124
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L + ++S++L+TKSLRPLP+K L++ E +YR RY+DLI+NE TR F+ R+
Sbjct: 125 ARSGKGDLYVDMTSVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEETRHTFRVRS 184
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ F+EVETP+L PGGA AKPF THHN+L+M MFLRIAPELYLKRL+
Sbjct: 185 QVIAHIRRFLSDRGFLEVETPMLQTIPGGAAAKPFATHHNALDMAMFLRIAPELYLKRLV 244
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +GT
Sbjct: 245 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQAVLGT 304
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ +AI KY P+ DL + ++ KK K+L
Sbjct: 305 TDVPYGDKVFHFGEPFARLSVFDAILKYNPEITAADLNDVEKARAIAKKAG-----AKVL 359
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
+ LQ+M+FEE E KL P +IT YP E+SPLAR+ N ++ ++T+RFELFI G E
Sbjct: 360 GHEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDQDPSVTDRFELFIGGRE 418
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + +YD D+++ALEYGMPP +G GIG+DR
Sbjct: 419 IANAYSELNDAEDQAERFMLQVKEKDAGDDE-AMHYDADFVNALEYGMPPTAGEGIGIDR 477
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 478 LVMLLTNSPSIRDVILFPHMR 498
>gi|392953853|ref|ZP_10319405.1| lysyl-tRNA synthetase [Hydrocarboniphaga effusa AP103]
gi|391857752|gb|EIT68282.1| lysyl-tRNA synthetase [Hydrocarboniphaga effusa AP103]
Length = 504
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 219/446 (49%), Positives = 299/446 (67%), Gaps = 20/446 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M KR GK+SF+ +QD+SG ++QL++ IG Y FK++DIGDI+GA GT+ +
Sbjct: 75 MAKRGQGKVSFVEIQDSSG-----RVQLFVQMNAIGAEAYEAFKSWDIGDIVGATGTVMR 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T GELS++VS L+L+TK LRPLP K+ L++ E +YR RY+DLI+N R VF KRT
Sbjct: 130 TKAGELSLRVSQLELLTKGLRPLPEKWSGLTDTETRYRQRYVDLIVNPEVRTVFAKRTTT 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+ IR F + FMEVETP+L GGA A+PF+THHN+L+ +FLRIAPELYLKRL++G
Sbjct: 190 LRFIRQFFDALGFMEVETPMLQPIAGGATARPFVTHHNALDRDLFLRIAPELYLKRLVVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF +++EIN+NFRNEG+S RHNPEFTM+EFY AY +Y M E +I+ + G+ K
Sbjct: 250 GFERVYEINRNFRNEGLSTRHNPEFTMLEFYQAYADYKDAMDLVENLIRDTAIVVNGSGK 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKIN----PKFNQKK 296
+ Y R D F + T+ EA+ ++ L++ FL S KK+ P + K
Sbjct: 310 LRYADRDYDLDAPFNRWTMKEAVLRFNADVTADQLEDPAFLASFAKKVGGDVKPAYGPGK 369
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
+L +FE+T E KL +PT+IT YPTE+SPLAR+ N N +T+RFE F G
Sbjct: 370 LLTE---------IFEKTVEAKLLDPTFITEYPTEVSPLARR-NDHNPEVTDRFEFFAGG 419
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND E+Q RFK Q+ K+ + E + +YD DYI ALEYG+PP +G GIG+
Sbjct: 420 REVANGFSELNDAEDQDARFKAQVAAKDAGDDE-AMHYDGDYIRALEYGLPPTAGVGIGI 478
Query: 417 DRLIMLLTNSKNIRDVILFPHLRNEN 442
DRL+M LT+S +IRDV+LFP ++ E+
Sbjct: 479 DRLVMFLTDSPSIRDVLLFPQMKPEH 504
>gi|71276051|ref|ZP_00652332.1| Lysyl-tRNA synthetase, class-2 [Xylella fastidiosa Dixon]
gi|170729665|ref|YP_001775098.1| lysyl-tRNA synthetase [Xylella fastidiosa M12]
gi|238687952|sp|B0U572.1|SYK_XYLFM RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|71163134|gb|EAO12855.1| Lysyl-tRNA synthetase, class-2 [Xylella fastidiosa Dixon]
gi|71730786|gb|EAO32859.1| Lysyl-tRNA synthetase, class-2 [Xylella fastidiosa subsp. sandyi
Ann-1]
gi|167964458|gb|ACA11468.1| lysyl-tRNA synthetase [Xylella fastidiosa M12]
Length = 506
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 221/444 (49%), Positives = 313/444 (70%), Gaps = 16/444 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M KR+MGK SF +QD SG +IQL I + ++G++ Y FK D+GDII +G L +
Sbjct: 77 MAKRLMGKASFAQIQDESG-----RIQLLIQSNVLGEDSYAAFKVLDVGDIIAVEGGLTR 131
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+KV+ L+L+TK+LRPLP+K+ L++ E +YR RY+DLI+ +R++F KR++I
Sbjct: 132 TRTGELSVKVNVLRLLTKALRPLPDKWHGLTDVEQRYRQRYVDLIVTPESREIFIKRSKI 191
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I ++R +++ F+EVETP++H PGGA AKPF+T+HN+L+++++LR+APELYLKRL++G
Sbjct: 192 IRALRTWLDARLFLEVETPMMHYIPGGAAAKPFVTYHNALDLELYLRVAPELYLKRLVVG 251
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G +++EIN+NFRNEG+S RHNPEFTM+E Y AY+ Y +M E MI+ +GTT+
Sbjct: 252 GLERVYEINRNFRNEGVSTRHNPEFTMLELYEAYSTYHEVMDLAETMIRDTAQSVLGTTQ 311
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYN--EIDLQNKLFLKSELKKINPKFNQKKIL 298
+ + G +D F + + EA+ + P+ + E ++ L L E KI K+
Sbjct: 312 VIWDGAQIDLGPIFRRWRMDEAVCHHNPEISVAECTDRDALLLHCERLKI-------KVK 364
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
++ L L +FE T E L PT+IT++P EISPLAR+S+IE + T+RFELFI G E
Sbjct: 365 SSYGWGRLLLSIFEATVEHTLIQPTFITDHPVEISPLARESDIE-SGYTDRFELFINGKE 423
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IANGFSELNDPEEQ++RF+ Q++ K + E + YYD DYI ALEYGM P G GIGVDR
Sbjct: 424 IANGFSELNDPEEQAMRFQKQVEAKEGGDDE-AMYYDADYIRALEYGMAPTGGLGIGVDR 482
Query: 419 LIMLLTNSKNIRDVILFPHLRNEN 442
L+MLLT S +IRDV+LFP++R E
Sbjct: 483 LVMLLTGSTSIRDVLLFPYMRPER 506
>gi|337754179|ref|YP_004646690.1| lysyl-tRNA synthetase [Francisella sp. TX077308]
gi|336445784|gb|AEI35090.1| Lysyl-tRNA synthetase (class II) [Francisella sp. TX077308]
Length = 560
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 223/442 (50%), Positives = 314/442 (71%), Gaps = 13/442 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNY-DIGDIIGAKGTLF 59
+L+RVMGK SFI LQD SG +IQ+Y+ + + Y FKN D+GDI+G GT+F
Sbjct: 131 VLRRVMGKASFITLQDYSG-----RIQIYLKKSDLPEGQYNTFKNLCDLGDIVGITGTMF 185
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KTNTGELS++ + +++TK++RPLP+KF L++QE++YR RY+DLI NE R+VFK R++
Sbjct: 186 KTNTGELSVEANHFEILTKAIRPLPDKFHGLADQEMRYRQRYVDLITNEKAREVFKVRSK 245
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
++S IR++ + DFMEVETP++H GGA AKPF THHN+L+M ++LRIAPELYLKRL++
Sbjct: 246 VVSFIRNYFDNMDFMEVETPMMHVLQGGAAAKPFKTHHNALDMPLYLRIAPELYLKRLVV 305
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF +++EIN+NFRNEG+S RHNPEFTM+EFY AY +Y LM TE M+ K++ + IG+
Sbjct: 306 GGFERVYEINRNFRNEGVSSRHNPEFTMLEFYMAYADYNDLMDLTEDMLSKLVQEVIGSE 365
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++Y ++F +E+++++++I KY + DL K +K+ K L
Sbjct: 366 ILEYGECKINFGGKYERISMVDSIVKYNDDITKEDLATFESAKVVAEKLKIKVEAYHELG 425
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+L +I FEET E +L PT+IT+YP +SPLAR+ + N T+RFE F+ EI
Sbjct: 426 HLINEI-----FEETVEHQLIQPTFITDYPAVVSPLARRQD-GNPEFTDRFEFFVGAREI 479
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
ANGFSELND E+Q+ RF+ Q++ + E + YD DYI ALEYGMPP +G GIG+DRL
Sbjct: 480 ANGFSELNDAEDQAERFRKQVEAAASGDDE-AMPYDKDYIQALEYGMPPTAGQGIGIDRL 538
Query: 420 IMLLTNSKNIRDVILFPHLRNE 441
+M LTNS++IRDVILFPH++ E
Sbjct: 539 VMYLTNSQSIRDVILFPHMKPE 560
>gi|424060749|ref|ZP_17798240.1| lysyl-tRNA synthetase [Acinetobacter baumannii Ab33333]
gi|404668701|gb|EKB36610.1| lysyl-tRNA synthetase [Acinetobacter baumannii Ab33333]
Length = 509
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 222/446 (49%), Positives = 317/446 (71%), Gaps = 26/446 (5%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G++ SF+++QD +G +IQLY+ + + K+ K D+GDII A+G +
Sbjct: 76 KVAGRVMLNRGSFMVIQDMTG-----RIQLYVDRKGLPKDTLETIKGLDLGDIIAAEGYI 130
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L + + L+L+TKSLRPLP+KF L++ E+KYR RY+DLI+NE TRK F+ R
Sbjct: 131 GRSGKGDLYVHLEGLELLTKSLRPLPDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRA 190
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
++++ IR F+ FMEVETP++H PGGA A+PF THHN+L+M +FLRIAPELYLKRL+
Sbjct: 191 KVVAGIRAFLTNERFMEVETPMMHVIPGGASARPFETHHNALDMPLFLRIAPELYLKRLV 250
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF ++FEIN+NFRNEG+S RHNPEFTMIEFY AY +Y LM TE M++K+ +D +GT
Sbjct: 251 VGGFERVFEINRNFRNEGVSTRHNPEFTMIEFYQAYADYKDLMALTENMLEKLALDILGT 310
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFL----KSELK-KINPKFN 293
T + YQG + F F+K+++ +AI + PQ+ ++ ++ FL + ELK ++ P F
Sbjct: 311 TDVPYQGEVFSFKGPFKKISMFDAILENNPQFTPENVGDREFLAKFVREELKEEVKPGFG 370
Query: 294 QKKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELF 353
K LQ ++FEET ETKL PT+IT YP E SPLAR+ N +N +IT+RFE F
Sbjct: 371 LGK---------LQTIVFEETVETKLRQPTFITEYPAETSPLARR-NDDNPHITDRFEFF 420
Query: 354 IIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCG 413
I G E+ANGFSELNDP +Q+ RF+ Q+ K+ + E + +YD +++ ALEYG+PP +G G
Sbjct: 421 IGGRELANGFSELNDPIDQAERFQAQVAEKDAGDDE-AMHYDAEFVEALEYGLPPTAGEG 479
Query: 414 IGVDRLIMLLTNSKNIRDVILFPHLR 439
IG+DRL+ML ++ +IRDVILFPH+R
Sbjct: 480 IGIDRLVMLFADAPSIRDVILFPHMR 505
>gi|28897287|ref|NP_796892.1| lysyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
gi|153839370|ref|ZP_01992037.1| lysyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
gi|260363583|ref|ZP_05776403.1| lysine--tRNA ligase [Vibrio parahaemolyticus K5030]
gi|260876252|ref|ZP_05888607.1| lysine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
gi|260896430|ref|ZP_05904926.1| lysine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
gi|417321371|ref|ZP_12107911.1| lysyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
gi|433656800|ref|YP_007274179.1| Lysyl-tRNA synthetase (class II) [Vibrio parahaemolyticus BB22OP]
gi|31340436|sp|Q87SB1.1|SYK_VIBPA RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|28805496|dbj|BAC58776.1| lysyl-tRNA synthetase, heat inducible [Vibrio parahaemolyticus RIMD
2210633]
gi|149747118|gb|EDM58106.1| lysyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
gi|308088407|gb|EFO38102.1| lysine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
gi|308092867|gb|EFO42562.1| lysine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
gi|308113326|gb|EFO50866.1| lysine--tRNA ligase [Vibrio parahaemolyticus K5030]
gi|328472051|gb|EGF42928.1| lysyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
gi|432507488|gb|AGB09005.1| Lysyl-tRNA synthetase (class II) [Vibrio parahaemolyticus BB22OP]
Length = 505
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 222/443 (50%), Positives = 312/443 (70%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
R+M K F+++Q+TSG +IQ Y E+ K L ++ DIGDIIG KG L K+
Sbjct: 73 RIMAKRGPFLVIQETSG-----RIQAYADKEV-QKELKEKYQGLDIGDIIGVKGALHKSG 126
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE++YR RY+DLI+NE++R F R++++S
Sbjct: 127 KGDLYVNMEEYELLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSRNAFVVRSKVMS 186
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM FMEVETP++H PGGA A+PFITHHN+L+M M+LRIAPELYLKRL++GGF
Sbjct: 187 AIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPMYLRIAPELYLKRLVVGGF 246
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
+++FEIN+NFRNEG+SPRHNPEFTM+EFY AY +Y LM FTE+++ + ++ +G+T +
Sbjct: 247 DRVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDFTEELLSSVALEVLGSTSMP 306
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y ++F + ++++ EAIK Y P + +I DLQN+ + S K ++ +
Sbjct: 307 YGEDTVEFGGKYARMSMFEAIKHYNPDHAQIQALTEEDLQNRELMVSIAKSVHVEVEPFW 366
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E KL PT+IT YP +ISPLAR+S+ +N T+RFE FI G
Sbjct: 367 TCGQLLEEI-----FGETAEPKLMQPTFITGYPADISPLARRSD-DNPFFTDRFEFFIGG 420
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND E+Q RFK Q++ K + E + +YD DYI ALE+G+PP +G GIG+
Sbjct: 421 REVANGFSELNDAEDQDARFKAQVEAKESGDDE-AMFYDADYITALEHGLPPTAGQGIGI 479
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL+MLLTN+ IRDVILFP +R
Sbjct: 480 DRLVMLLTNTHTIRDVILFPAMR 502
>gi|375133897|ref|YP_004994547.1| lysyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2]
gi|325121342|gb|ADY80865.1| lysyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2]
Length = 520
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 220/446 (49%), Positives = 318/446 (71%), Gaps = 26/446 (5%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G++ SF+++QD +G +IQLY+ + + K++ K D+GDII A+G +
Sbjct: 87 KVAGRVMLNRGSFMVIQDMTG-----RIQLYVDRKGLPKDILETIKGLDLGDIIAAEGYI 141
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L + + +L+TKSLRPLP+KF L++ E+KYR RY+DLI+NE TRK F+ R
Sbjct: 142 GRSGKGDLYVHLEGFELLTKSLRPLPDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRA 201
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
++++ IR F+ FMEVETP++H PGGA A+PF THHN+L+M +FLRIAPELYLKRL+
Sbjct: 202 KVVAGIRAFLNNERFMEVETPMMHVIPGGASARPFETHHNALDMPLFLRIAPELYLKRLV 261
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF ++FEIN+NFRNEG+S RHNPEFTMIEFY AY +Y LM TE M++K+ +D +GT
Sbjct: 262 VGGFERVFEINRNFRNEGVSTRHNPEFTMIEFYQAYADYKDLMALTENMLEKLALDILGT 321
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFL----KSELK-KINPKFN 293
T + YQG + F F+K+++ +AI + PQ+ ++ ++ FL + ELK ++ P F
Sbjct: 322 TDVPYQGEVFSFKGPFKKISMFDAILENNPQFTPENVSDREFLAKFIREELKEEVKPGFG 381
Query: 294 QKKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELF 353
K LQ ++FEET ETKL PT+IT+YP E SPLAR+ N +N ++T+RFE F
Sbjct: 382 LGK---------LQTIVFEETVETKLRQPTFITDYPAETSPLARR-NDDNPHVTDRFEFF 431
Query: 354 IIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCG 413
I G E+ANGFSELNDP +Q+ RF+ Q+ K+ + E + +YD +++ ALEYG+PP +G G
Sbjct: 432 IGGRELANGFSELNDPIDQAERFQAQVAEKDAGDDE-AMHYDAEFVEALEYGLPPTAGEG 490
Query: 414 IGVDRLIMLLTNSKNIRDVILFPHLR 439
IG+DRL+ML ++ +IRDVILFPH+R
Sbjct: 491 IGIDRLVMLFADAPSIRDVILFPHMR 516
>gi|422909178|ref|ZP_16943830.1| lysyl-tRNA synthetase [Vibrio cholerae HE-09]
gi|424658533|ref|ZP_18095790.1| lysyl-tRNA synthetase [Vibrio cholerae HE-16]
gi|341635768|gb|EGS60474.1| lysyl-tRNA synthetase [Vibrio cholerae HE-09]
gi|408055017|gb|EKG89971.1| lysyl-tRNA synthetase [Vibrio cholerae HE-16]
Length = 510
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 221/443 (49%), Positives = 312/443 (70%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM K F+++Q+TSG +IQ Y S E+ + L ++ DIGDIIG +G L K+
Sbjct: 78 RVMAKRGPFLVIQETSG-----RIQAYASKEV-QQELKDQYQGLDIGDIIGVQGALHKSG 131
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE++YR RY+DLI+NEN+R F R++++S
Sbjct: 132 KGDLYVNMEQFQLLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNENSRNAFIVRSKVMS 191
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM FMEVETP++H PGGA A+PFITHHN+L+M M+LRIAPELYLKRL++GGF
Sbjct: 192 AIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPMYLRIAPELYLKRLVVGGF 251
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
+++FEIN+NFRNEG+SPRHNPEFTM+EFY AY +Y LM TE+++ + ++ +G+T +
Sbjct: 252 DRVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLGSTSMP 311
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y ++F + ++++ +AIK Y P + +I D+QN+ + S K ++
Sbjct: 312 YGEHTVEFGGKYARMSMFDAIKHYNPDHAQIQALTEDDIQNRDLMVSIAKSVHVDVEPFW 371
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E KL PT+IT YP +ISPLAR+S+ +N T+RFE FI G
Sbjct: 372 TCGQLLEEI-----FGETAEPKLMQPTFITGYPADISPLARRSD-DNPFFTDRFEFFIGG 425
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND E+Q RFK+Q++ K + E + +YD DYI ALEYG+PP +G GIG+
Sbjct: 426 REVANGFSELNDAEDQDARFKSQVEAKESGDDE-AMFYDADYITALEYGLPPTAGQGIGI 484
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL+MLLTN+ IRDVILFP +R
Sbjct: 485 DRLVMLLTNTHTIRDVILFPAMR 507
>gi|407008065|gb|EKE23546.1| hypothetical protein ACD_6C00430G0009 [uncultured bacterium]
Length = 509
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 219/449 (48%), Positives = 320/449 (71%), Gaps = 26/449 (5%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G++ SFI++QD +G +IQLY++ + + +++ K D+GDII +G +
Sbjct: 76 KVAGRVMLNRGSFIVIQDMTG-----RIQLYVARKELAEDVLATIKGLDLGDIIAVEGYI 130
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L + + +L+TKSLRPLP+KF L++ E+KYR RY+DLI+NE TRK F+ R
Sbjct: 131 GRSGKGDLYVHIEHFELLTKSLRPLPDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRA 190
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
++++ IR F+ + +MEVETP++H PGGA A+PF THHN+L+M +FLRIAPELYLKRL+
Sbjct: 191 KVVAGIRAFLTEKRYMEVETPMMHVIPGGASARPFETHHNALDMSLFLRIAPELYLKRLV 250
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF ++FEIN+NFRNEG+S RHNPEFTMIEFY AY +Y LM+ TE+M++++ +D +GT
Sbjct: 251 VGGFERVFEINRNFRNEGVSTRHNPEFTMIEFYQAYADYKDLMELTEQMLERLAIDILGT 310
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNK----LFLKSELK-KINPKFN 293
T + Y + F F+K+++ +AI + PQ+ ++ ++ FL+ ELK ++ P F
Sbjct: 311 TDVPYGDEVYSFKGPFKKISMFDAILENNPQFTPENVNDREFLAKFLQEELKEQVKPGFG 370
Query: 294 QKKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELF 353
K LQ M+FEET ETKL PT+IT YP E SPLAR+ N N +IT+RFE F
Sbjct: 371 LGK---------LQTMVFEETVETKLRQPTFITEYPAETSPLARR-NDHNPHITDRFEFF 420
Query: 354 IIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCG 413
I G E+ANGFSELNDP +Q+ RF+ Q+ K+ + E + +YD D++ ALEYG+PP +G G
Sbjct: 421 IGGRELANGFSELNDPIDQAERFQAQVAEKDAGDDE-AMHYDADFVEALEYGLPPTAGEG 479
Query: 414 IGVDRLIMLLTNSKNIRDVILFPHLRNEN 442
IG+DRL+M+ N+ +IRDVILFPH+R++N
Sbjct: 480 IGIDRLVMIFANAASIRDVILFPHMRHKN 508
>gi|387823736|ref|YP_005823207.1| lysyl-tRNA synthetase [Francisella cf. novicida 3523]
gi|328675335|gb|AEB28010.1| Lysyl-tRNA synthetase (class II) [Francisella cf. novicida 3523]
Length = 560
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 222/442 (50%), Positives = 315/442 (71%), Gaps = 13/442 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNY-DIGDIIGAKGTLF 59
+L+RVMGK SFI LQD +G +IQ+Y+ + + Y FKN D+GDI+G GT+F
Sbjct: 131 VLRRVMGKASFITLQDYTG-----RIQVYLKKSDLPEGQYETFKNLCDLGDIVGISGTMF 185
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KTNTGELS++ + +++TK++RPLP+KF L++QE++YR RY+DLI NE R+VFK R++
Sbjct: 186 KTNTGELSVEANHFEILTKAIRPLPDKFHGLADQEMRYRQRYVDLITNEKAREVFKVRSK 245
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
++S IR++ +K DFMEVETP++H GGA AKPF THHN+L+M ++LRIAPELYLKRL++
Sbjct: 246 VVSFIRNYFDKLDFMEVETPMMHVLQGGAAAKPFKTHHNALDMPLYLRIAPELYLKRLVV 305
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF +++EIN+NFRNEG+S RHNPEFTM+EFY AY +Y LM TE M+ K++ + IG+
Sbjct: 306 GGFERVYEINRNFRNEGVSSRHNPEFTMLEFYMAYADYNDLMDLTEDMLSKLVQEVIGSE 365
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++Y ++F +E+++++++I KY + DL K +K+ K L
Sbjct: 366 VLEYGEYKINFGGKYERISMVDSIVKYNDDITKEDLVTFESAKKIAEKLKIKVEAYHELG 425
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+L +I FEET E +L PT+IT+YP +SPLAR+ + N T+RFE FI E+
Sbjct: 426 HLINEI-----FEETVEHQLIQPTFITDYPAVVSPLARRQD-SNPEFTDRFEFFIGAREV 479
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
ANGFSELND E+Q+ RF+ Q++ + E + YD DYI ALEYG+PP +G GIG+DRL
Sbjct: 480 ANGFSELNDAEDQAERFRKQVEAAASGDDE-AMPYDKDYIRALEYGLPPTAGQGIGIDRL 538
Query: 420 IMLLTNSKNIRDVILFPHLRNE 441
+M LTNS++IRDVILFPH++ E
Sbjct: 539 VMYLTNSQSIRDVILFPHMKPE 560
>gi|239502972|ref|ZP_04662282.1| lysyl-tRNA synthetase [Acinetobacter baumannii AB900]
gi|421679783|ref|ZP_16119651.1| lysine--tRNA ligase [Acinetobacter baumannii OIFC111]
gi|410390602|gb|EKP42985.1| lysine--tRNA ligase [Acinetobacter baumannii OIFC111]
Length = 509
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 221/446 (49%), Positives = 316/446 (70%), Gaps = 26/446 (5%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G++ SF+++QD +G +IQLY+ + + K+ K D+GDII A+G +
Sbjct: 76 KVAGRVMLNRGSFMVIQDMTG-----RIQLYVDRKGLPKDTLETIKGLDLGDIIAAEGYI 130
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L + + +L+TKSLRPLP+KF L++ E+KYR RY+DLI+NE TRK F+ R
Sbjct: 131 GRSGKGDLYVHLEGFELLTKSLRPLPDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRA 190
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
++++ IR F+ FMEVETP++H PGGA A+PF THHN+L+M +FLRIAPELYLKRL+
Sbjct: 191 KVVAGIRAFLTNERFMEVETPMMHVIPGGASARPFETHHNALDMPLFLRIAPELYLKRLV 250
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF ++FEIN+NFRNEG+S RHNPEFTMIEFY AY +Y LM TE M++K+ +D +GT
Sbjct: 251 VGGFERVFEINRNFRNEGVSTRHNPEFTMIEFYQAYADYKDLMALTENMLEKLALDILGT 310
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFL----KSELK-KINPKFN 293
T + YQG + F F+K+++ +AI + PQ+ ++ ++ FL + ELK ++ P F
Sbjct: 311 TDVPYQGEVFSFKGPFKKISMFDAILENNPQFTPENVGDREFLAKFVREELKEEVKPGFG 370
Query: 294 QKKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELF 353
K LQ ++FEET ETKL PT+IT YP E SPLAR+ N +N +IT+RFE F
Sbjct: 371 LGK---------LQTIVFEETVETKLRQPTFITEYPAETSPLARR-NDDNPHITDRFEFF 420
Query: 354 IIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCG 413
I G E+ANGFSELNDP +Q+ RF+ Q+ K+ + E + +YD +++ ALEYG+PP +G G
Sbjct: 421 IGGRELANGFSELNDPIDQAARFQAQVAEKDAGDDE-AMHYDAEFVEALEYGLPPTAGEG 479
Query: 414 IGVDRLIMLLTNSKNIRDVILFPHLR 439
IG+DRL+ML ++ +IRDVILFPH+R
Sbjct: 480 IGIDRLVMLFADAPSIRDVILFPHMR 505
>gi|406036755|ref|ZP_11044119.1| lysyl-tRNA ligase [Acinetobacter parvus DSM 16617 = CIP 108168]
Length = 508
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 219/448 (48%), Positives = 313/448 (69%), Gaps = 24/448 (5%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G++ SFI++QD +G +IQLY+ + + K+ D+GDII A+G +
Sbjct: 76 KVAGRVMLNRGSFIVIQDMTG-----RIQLYVDRKGLAAETLETIKSLDLGDIIAAEGYI 130
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L + + +L+TKSLRPLP+KF L++ E KYR RY+DLI+NE TRK F+ R
Sbjct: 131 GRSGKGDLYVHLEQFELLTKSLRPLPDKFHGLTDTEAKYRKRYLDLIVNEETRKTFEIRA 190
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
++++ IR F+ FMEVETP++H PGGA A+PF THHN+L+M +FLRIAPELYLKRL+
Sbjct: 191 KVVAGIRAFLSNERFMEVETPMMHVIPGGASARPFETHHNALDMPLFLRIAPELYLKRLV 250
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF ++FEIN+NFRNEG+S RHNPEFTMIEFY AY +Y LM TE M++K+ +D +GT
Sbjct: 251 VGGFERVFEINRNFRNEGVSTRHNPEFTMIEFYQAYADYKDLMALTENMLEKLALDILGT 310
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + YQG + F F K+++ +AI ++ P + ++ ++ FL KF Q+ +
Sbjct: 311 TDVPYQGEVFSFKGPFRKISMFDAILEHNPDFTPENVNDREFLA--------KFTQEVLK 362
Query: 299 NNLKKDI----LQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFI 354
+K LQ ++FEET ETKL PT+IT YP E SPLAR+ N +N +IT+RFE FI
Sbjct: 363 EQVKPGFGLGKLQTIVFEETVETKLRQPTFITEYPAETSPLARR-NDDNPHITDRFEFFI 421
Query: 355 IGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGI 414
G E+ANGFSELNDP +Q+ RF+ Q+ K+ + E + +YD D++ ALEYG+PP +G GI
Sbjct: 422 GGRELANGFSELNDPIDQAERFQAQVAEKDAGDDE-AMHYDADFVEALEYGLPPTAGEGI 480
Query: 415 GVDRLIMLLTNSKNIRDVILFPHLRNEN 442
G+DRL+ML ++ +IRDVILFPH+R ++
Sbjct: 481 GIDRLVMLFADAPSIRDVILFPHMRRKD 508
>gi|294634836|ref|ZP_06713359.1| lysine--tRNA ligase [Edwardsiella tarda ATCC 23685]
gi|291091772|gb|EFE24333.1| lysine--tRNA ligase [Edwardsiella tarda ATCC 23685]
Length = 418
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 216/420 (51%), Positives = 305/420 (72%), Gaps = 8/420 (1%)
Query: 21 DSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLFKTNTGELSIKVSSLKLITKS 79
D G+IQLYI+ + + ++Y++ FK +D+GDIIGA+G LF+T TGELSI S++L+TK+
Sbjct: 3 DMGGRIQLYIARDDLKDDVYSEQFKKWDLGDIIGARGKLFRTQTGELSIHCHSIRLLTKA 62
Query: 80 LRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIISSIRHFMEKNDFMEVETP 139
LRPLP+KF L++QE +YR RY+DLI NE++R+ F+ R++I+++IR+FM FMEVETP
Sbjct: 63 LRPLPDKFHGLADQETRYRQRYLDLIANESSRETFRTRSKILAAIRNFMVNKGFMEVETP 122
Query: 140 ILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGFNKIFEINKNFRNEGISP 199
++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++GGF ++FEIN+NFRNEG+SP
Sbjct: 123 MMQVIPGGASARPFITHHNALDIDMYLRIAPELYLKRLVVGGFERVFEINRNFRNEGVSP 182
Query: 200 RHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKIDYQGRLLDFSKSFEKLTI 259
RHNPEFTM+E Y AY +Y L+ TE++ + I D +G++ + Y + DFSK F K+++
Sbjct: 183 RHNPEFTMMELYMAYADYKDLIVLTEELFRTISQDVLGSSVVQYGDQTFDFSKPFIKMSM 242
Query: 260 IEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNNLKKDILQLMLFEETTETKL 319
EAI Y P DL + + + K + L +Q +F+ET E++L
Sbjct: 243 KEAICHYRPDIASADLDDMEKACKIAESLGIKIEKSWGLGR-----VQCEIFDETAESQL 297
Query: 320 WNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIANGFSELNDPEEQSVRFKNQ 379
PT+IT YP E+SPLAR+ N EN IT+RFE FI G EI NGFSELND E+Q+ RF++Q
Sbjct: 298 IQPTFITEYPAEVSPLARR-NDENPFITDRFEFFIGGREIGNGFSELNDAEDQAERFQDQ 356
Query: 380 IDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLIMLLTNSKNIRDVILFPHLR 439
+ K+ + E + +YD DY+ ALE+G+PP +G G+G+DR++ML TNS IRDVILFP +R
Sbjct: 357 VKAKDAGDDE-AMFYDEDYVTALEHGLPPTAGLGVGIDRMMMLFTNSHTIRDVILFPAMR 415
>gi|149192199|ref|ZP_01870416.1| lysyl-tRNA synthetase [Vibrio shilonii AK1]
gi|148833957|gb|EDL50977.1| lysyl-tRNA synthetase [Vibrio shilonii AK1]
Length = 505
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 219/443 (49%), Positives = 312/443 (70%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
R+M K F+++Q+TSG +IQ Y + ++ K L ++ DIGDIIG KG L K+
Sbjct: 73 RIMAKRGPFLVIQETSG-----RIQAYAAKDV-QKELKEKYQGLDIGDIIGVKGALHKSG 126
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE++YR RY+DLI+NE++R+ F R++++S
Sbjct: 127 KGDLYVNMEEYELLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSRQAFIVRSKLVS 186
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
SIR+FM ++EVETP++H PGGA A+PFITHHN+L++ M+LR+APELYLKRL++GGF
Sbjct: 187 SIRNFMSSKGYLEVETPMMHVIPGGATARPFITHHNALDIDMYLRVAPELYLKRLVVGGF 246
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
+++FEIN+NFRNEG+SPRHNPEFTM+EFY AY +Y LM TE+M+ + MD +G+T +
Sbjct: 247 DRVFEINRNFRNEGLSPRHNPEFTMMEFYQAYADYKDLMDLTEEMLSTVAMDVLGSTSMP 306
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y ++F + ++++ +AIK Y P++ +I DL N+ + S K ++ +
Sbjct: 307 YGDETVEFGGKYARMSMFDAIKHYNPEHEQIQALTEEDLTNRELMVSIAKSVHVEVETFW 366
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E KL PT+IT YP +ISPLAR+S+ +N T+RFE FI G
Sbjct: 367 TCGQLLEEI-----FGETAEPKLIQPTFITGYPADISPLARRSD-DNPFFTDRFEFFIGG 420
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND E+Q RFK Q+D K+ + E + YYD DYI ALE+G+PP +G GIG+
Sbjct: 421 REVANGFSELNDAEDQDARFKAQVDAKDAGDDE-AMYYDADYITALEHGLPPTAGQGIGI 479
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL ML TN+ IRDVILFP +R
Sbjct: 480 DRLAMLFTNTHTIRDVILFPAMR 502
>gi|262375839|ref|ZP_06069071.1| lysyl-tRNA synthetase [Acinetobacter lwoffii SH145]
gi|262309442|gb|EEY90573.1| lysyl-tRNA synthetase [Acinetobacter lwoffii SH145]
Length = 509
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 219/449 (48%), Positives = 319/449 (71%), Gaps = 26/449 (5%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G++ SFI++QD +G +IQLY++ + + ++ K D+GDII +G +
Sbjct: 76 KVAGRVMLNRGSFIVIQDMTG-----RIQLYVARKELAADVLATIKGLDLGDIIAVEGYI 130
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L + + +L+TKSLRPLP+KF L++ E+KYR RY+DLI+NE TRK F+ R
Sbjct: 131 GRSGKGDLYVHIEHFELLTKSLRPLPDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRA 190
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
++++ IR F+ + +MEVETP++H PGGA A+PF THHN+L+M +FLRIAPELYLKRL+
Sbjct: 191 KVVAGIRAFLTEKRYMEVETPMMHVIPGGASARPFETHHNALDMSLFLRIAPELYLKRLV 250
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF ++FEIN+NFRNEG+S RHNPEFTMIEFY AY +Y LM+ TE+M++++ +D +GT
Sbjct: 251 VGGFERVFEINRNFRNEGVSTRHNPEFTMIEFYQAYADYKDLMELTEQMLERLAIDILGT 310
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNK----LFLKSELK-KINPKFN 293
T + Y + F F+K+++ +AI + PQ+ ++ ++ FL+ ELK ++ P F
Sbjct: 311 TDVPYGDEVYSFKGPFKKISMFDAILENNPQFTPENVNDREFLAKFLQEELKEQVKPGFG 370
Query: 294 QKKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELF 353
K LQ M+FEET ETKL PT+IT YP E SPLAR+ N N +IT+RFE F
Sbjct: 371 LGK---------LQTMVFEETVETKLRQPTFITEYPAETSPLARR-NDHNPHITDRFEFF 420
Query: 354 IIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCG 413
I G E+ANGFSELNDP +Q+ RF+ Q+ K+ + E + +YD D++ ALEYG+PP +G G
Sbjct: 421 IGGRELANGFSELNDPIDQAERFQAQVAEKDAGDDE-AMHYDADFVEALEYGLPPTAGEG 479
Query: 414 IGVDRLIMLLTNSKNIRDVILFPHLRNEN 442
IG+DRL+M+ N+ +IRDVILFPH+R++N
Sbjct: 480 IGIDRLVMIFANAASIRDVILFPHMRHKN 508
>gi|156973279|ref|YP_001444186.1| lysyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
gi|166230600|sp|A7MXL2.1|SYK_VIBHB RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|156524873|gb|ABU69959.1| hypothetical protein VIBHAR_00960 [Vibrio harveyi ATCC BAA-1116]
Length = 510
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 219/443 (49%), Positives = 315/443 (71%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
R+M K F+++Q+TSG +IQ Y +++ + K L ++ DIGDIIG KG L K+
Sbjct: 78 RIMAKRGPFLVIQETSG-----RIQAY-ADKAVQKVLKEKYQGLDIGDIIGVKGALHKSG 131
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE++YR RY+DLI+NE++R+ F R++++S
Sbjct: 132 KGDLYVNMEEFELLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSRQAFVVRSKVMS 191
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM FMEVETP++H PGGA A+PFITHHN+L+M M+LRIAPELYLKRL++GGF
Sbjct: 192 AIRNFMITKQFMEVETPMMHVIPGGASARPFITHHNALDMPMYLRIAPELYLKRLVVGGF 251
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
+++FEIN+NFRNEG+SPRHNPEFTM+EFY AY +Y LM TE+++ + ++ +G+T +
Sbjct: 252 DRVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKELMDLTEELLSSVALEVLGSTSMP 311
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y ++F ++ ++++ EAIK Y P + +I D+QN+ + S K ++ +
Sbjct: 312 YGDDTVEFGGTYTRMSMFEAIKHYNPDHAQIQALTEEDIQNRDLMVSIAKSVHVEVESFW 371
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E KL PT+IT YP +ISPLAR+S+ +N T+RFE FI G
Sbjct: 372 TCGQLLEEI-----FGETAEPKLMQPTFITGYPADISPLARRSD-DNPFFTDRFEFFIGG 425
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND E+Q RFK Q++ K + E + +YD DYI ALE+G+PP +G GIG+
Sbjct: 426 REVANGFSELNDAEDQDARFKAQVEAKESGDDE-AMFYDADYITALEHGLPPTAGQGIGI 484
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL+MLLTN+ IRDVILFP +R
Sbjct: 485 DRLVMLLTNTHTIRDVILFPAMR 507
>gi|319760399|ref|YP_004124337.1| lysyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
gi|318039113|gb|ADV33663.1| lysyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
Length = 515
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 239/446 (53%), Positives = 314/446 (70%), Gaps = 18/446 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYIS-NEIIGKNLYTD-FKNYDIGDIIGAKGTL 58
M +R+MGK SFI+L+D G IQLYI+ N ++ K +Y + K D+GDIIGA+G L
Sbjct: 79 MTRRIMGKASFIVLKD-----GEGSIQLYITINSLLSKQIYVNHLKQLDLGDIIGAQGIL 133
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
FKT TGELSI+ ++ L++KSLRPLP+KF L+N E KYR RY+DLI+N+ + K+FKKR+
Sbjct: 134 FKTRTGELSIRCYNVMLLSKSLRPLPSKFYGLNNSEKKYRQRYLDLIVNDKSSKIFKKRS 193
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
II IR FM+K DF+EVETPI+H PGGAIA+PF+T+HN L M M+LRIAPELYLK+LI
Sbjct: 194 LIIYKIRQFMKKYDFIEVETPIMHTIPGGAIARPFVTYHNKLGMHMYLRIAPELYLKKLI 253
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
IGGF +IFEIN+NFRNE ISP HNPEFTM+E Y AY++Y ++ FT+K++ K+ +
Sbjct: 254 IGGFERIFEINRNFRNESISPYHNPEFTMMEVYIAYSDYKDMISFTQKLLSKLAEQIFKS 313
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
I Y L+F + F K+++ EAI Y P+ ++ + + LKK +FN+K L
Sbjct: 314 NTIQYGEYCLNFKEPFTKMSVKEAIIYYLPEVKLNNINDMSIIVDILKKFEIQFNKKWSL 373
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
L ++LFEE K+ PT+IT+YPTE+SPLAR N ++ + +RFELFI G E
Sbjct: 374 EK-----LHMLLFEEIITKKIIQPTFITHYPTELSPLAR-CNDNDSKLADRFELFIAGFE 427
Query: 359 IANGFSELNDPEEQSVRFKNQI-----DLKNEINGELSSYYDTDYIHALEYGMPPASGCG 413
I NGFSELNDP++Q RF QI + KN N ++ YD DY+ ALEYG+PP SG G
Sbjct: 428 IGNGFSELNDPDDQRDRFLKQIQEKRMNSKNTDNTDIVHCYDEDYLTALEYGLPPTSGIG 487
Query: 414 IGVDRLIMLLTNSKNIRDVILFPHLR 439
IG+DRL+MLLTN NIRDVILFP LR
Sbjct: 488 IGIDRLVMLLTNQHNIRDVILFPTLR 513
>gi|293608892|ref|ZP_06691195.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|427424528|ref|ZP_18914651.1| lysine--tRNA ligase [Acinetobacter baumannii WC-136]
gi|292829465|gb|EFF87827.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|425698828|gb|EKU68461.1| lysine--tRNA ligase [Acinetobacter baumannii WC-136]
Length = 509
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 220/446 (49%), Positives = 318/446 (71%), Gaps = 26/446 (5%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G++ SF+++QD +G +IQLY+ + + K++ K D+GDII A+G +
Sbjct: 76 KVAGRVMLNRGSFMVIQDMTG-----RIQLYVDRKGLPKDILETIKGLDLGDIIAAEGYI 130
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L + + +L+TKSLRPLP+KF L++ E+KYR RY+DLI+NE TRK F+ R
Sbjct: 131 GRSGKGDLYVHLEGFELLTKSLRPLPDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRA 190
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
++++ IR F+ FMEVETP++H PGGA A+PF THHN+L+M +FLRIAPELYLKRL+
Sbjct: 191 KVVAGIRAFLNNERFMEVETPMMHVIPGGASARPFETHHNALDMPLFLRIAPELYLKRLV 250
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF ++FEIN+NFRNEG+S RHNPEFTMIEFY AY +Y LM TE M++K+ +D +GT
Sbjct: 251 VGGFERVFEINRNFRNEGVSTRHNPEFTMIEFYQAYADYKDLMALTENMLEKLALDILGT 310
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFL----KSELK-KINPKFN 293
T + YQG + F F+K+++ +AI + PQ+ ++ ++ FL + ELK ++ P F
Sbjct: 311 TDVPYQGEVFSFKGPFKKISMFDAILENNPQFTPENVGDREFLAKFIREELKEEVKPGFG 370
Query: 294 QKKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELF 353
K LQ ++FEET ETKL PT+IT+YP E SPLAR+ N +N ++T+RFE F
Sbjct: 371 LGK---------LQTIVFEETVETKLRQPTFITDYPAETSPLARR-NDDNPHVTDRFEFF 420
Query: 354 IIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCG 413
I G E+ANGFSELNDP +Q+ RF+ Q+ K+ + E + +YD +++ ALEYG+PP +G G
Sbjct: 421 IGGRELANGFSELNDPIDQAERFQAQVAEKDAGDDE-AMHYDAEFVEALEYGLPPTAGEG 479
Query: 414 IGVDRLIMLLTNSKNIRDVILFPHLR 439
IG+DRL+ML ++ +IRDVILFPH+R
Sbjct: 480 IGIDRLVMLFADAPSIRDVILFPHMR 505
>gi|333909079|ref|YP_004482665.1| Lysyl-tRNA synthetase [Marinomonas posidonica IVIA-Po-181]
gi|333479085|gb|AEF55746.1| Lysyl-tRNA synthetase [Marinomonas posidonica IVIA-Po-181]
Length = 499
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 224/446 (50%), Positives = 309/446 (69%), Gaps = 28/446 (6%)
Query: 5 VMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTNTG 64
V + +F++LQD SG +IQ YI+ + + L + K +D+GDIIG G + K+ G
Sbjct: 74 VRNRGAFMLLQDMSG-----QIQAYINRKALSPELLAEQKTWDLGDIIGITGPVHKSGKG 128
Query: 65 ELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIISSI 124
+L I + +L+TKSLRPLP+K LS+ E++YR RY+DLI+NE +R F+ R++IIS+I
Sbjct: 129 DLYIDMQEAQLLTKSLRPLPDKHHGLSDMEMRYRQRYVDLIVNEESRDTFQIRSKIISTI 188
Query: 125 RHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGFNK 184
R F+E FMEVETP+L PGGA A+PF+THHN+++M M+LRIAPELYLKRL++GGF +
Sbjct: 189 RRFLEDRRFMEVETPMLQTIPGGATARPFVTHHNAMDMSMYLRIAPELYLKRLVVGGFER 248
Query: 185 IFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKIDYQ 244
+FEIN+NFRNEG S RHNPEFTMIEFY AY +Y LM TE M++ + + TT + YQ
Sbjct: 249 VFEINRNFRNEGTSTRHNPEFTMIEFYQAYADYKDLMDLTEAMLRDVAEKVLDTTTVTYQ 308
Query: 245 GRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNNLKKD 304
G DF F ++T++E+I Y P+ E DL S L+K + +LK D
Sbjct: 309 GSEYDFGAPFVRMTMLESILHYNPELTEDDL-------STLEKAT------AVAKSLKID 355
Query: 305 I--------LQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
+ L +FEET E KL PT+IT YP E+SPLAR+ N +N+ IT+RFE F+ G
Sbjct: 356 VKPIWGLGKLWTEIFEETAEHKLDQPTFITEYPAEVSPLARR-NDDNDFITDRFEFFVGG 414
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
EIANGFSELNDPE+Q+ RFK Q+ K+ + E + +YD DYI+ALEYG+PP +G GIG+
Sbjct: 415 REIANGFSELNDPEDQAERFKRQVAEKDAGDDE-AMHYDADYINALEYGLPPTAGEGIGI 473
Query: 417 DRLIMLLTNSKNIRDVILFPHLRNEN 442
DRL+ML T++ +IRDV+LFPH++ ++
Sbjct: 474 DRLVMLFTDAPSIRDVLLFPHMKPQD 499
>gi|261212225|ref|ZP_05926511.1| lysyl-tRNA synthetase (class II) [Vibrio sp. RC341]
gi|260838833|gb|EEX65484.1| lysyl-tRNA synthetase (class II) [Vibrio sp. RC341]
Length = 510
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 220/443 (49%), Positives = 313/443 (70%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM K F+++Q+TSG +IQ Y S ++ + L ++ DIGDIIG +G L K+
Sbjct: 78 RVMAKRGPFLVIQETSG-----RIQAYASKDV-QQELKDQYQGLDIGDIIGVQGALHKSG 131
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE++YR RY+DLI+NE++R F R++++S
Sbjct: 132 KGDLYVNMEQFQLLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNESSRNAFVVRSKVMS 191
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM FMEVETP++H PGGA A+PFITHHN+L+M M+LRIAPELYLKRL++GGF
Sbjct: 192 AIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPMYLRIAPELYLKRLVVGGF 251
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
+++FEIN+NFRNEG+SPRHNPEFTM+EFY AY +Y LM TE+++ + ++ +G+T +
Sbjct: 252 DRVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLGSTSMP 311
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y ++F + +++++EAIK Y P + +I D+QN+ + S K ++ +
Sbjct: 312 YGEHTVEFGGKYARMSMVEAIKHYNPNHAQIQALTEEDIQNRDLMVSIAKSVHVEVEPFW 371
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E KL PT+IT YP +ISPLAR+S+ +N T+RFE FI G
Sbjct: 372 TCGQLLEEI-----FGETAEPKLMQPTFITGYPADISPLARRSD-DNPFFTDRFEFFIGG 425
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND E+Q RFK Q++ K + E + +YD DYI ALE+G+PP +G GIG+
Sbjct: 426 REVANGFSELNDAEDQDARFKAQVEAKESGDDE-AMFYDADYITALEHGLPPTAGQGIGI 484
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL+MLLTNS IRDVILFP +R
Sbjct: 485 DRLVMLLTNSHTIRDVILFPAMR 507
>gi|423097110|ref|ZP_17084906.1| lysyl-tRNA synthetase [Pseudomonas fluorescens Q2-87]
gi|397884857|gb|EJL01340.1| lysyl-tRNA synthetase [Pseudomonas fluorescens Q2-87]
Length = 500
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 221/441 (50%), Positives = 313/441 (70%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + + K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLPEETLAAVKTWDLGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L ++++S++L+TKSLRPLP+K L++ E +YR RY+DLI+NE R+ F+ R+
Sbjct: 124 ARSGKGDLYVEMTSVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEEVRQTFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ K DF+EVETP+L PGGA AKPF THHN+L+M+MFLRIAPELYLKRL+
Sbjct: 184 QVIAHIRSFLMKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +GT
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGT 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P DLQ+ ++ KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPDITAADLQDIEKARAIAKKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+ N EN ++T+RFELFI G E
Sbjct: 359 GFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDENPSVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFMAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 477 LVMLLTNSPSIRDVILFPHMR 497
>gi|298157124|gb|EFH98212.1| Lysyl-tRNA synthetase (class II) [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
Length = 500
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 219/441 (49%), Positives = 316/441 (71%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + + + K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLPEETLAEVKTWDLGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L +++++++L+TKSLRPLP+K L++ E +YR RY+DLI+NE+ R+ F+ R+
Sbjct: 124 ARSGKGDLYVEMTTVRLLTKSLRPLPDKHNGLTDTEQRYRQRYVDLIVNEDVRETFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ K DF+EVETP+L PGGA AKPF THHN+L+M+MFLRIAPELYLKRL+
Sbjct: 184 QVIAHIRSFLMKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +GT
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGT 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P DLQ+ ++ KK K + L
Sbjct: 304 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPDLTAADLQDVDKARAIAKKAGAKVFGFEGL 363
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+ N EN ++T+RFELFI G E
Sbjct: 364 GK-----LQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDENPSVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF+ Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFQAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLT+S +IRDVILFPH+R
Sbjct: 477 LVMLLTDSPSIRDVILFPHMR 497
>gi|115315489|ref|YP_764212.1| lysyl-tRNA synthetase [Francisella tularensis subsp. holarctica
OSU18]
gi|156503376|ref|YP_001429441.1| lysyl-tRNA synthetase [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|422939389|ref|YP_007012536.1| lysyl-tRNA synthetase [Francisella tularensis subsp. holarctica
FSC200]
gi|423051541|ref|YP_007009975.1| lysyl-tRNA ligase [Francisella tularensis subsp. holarctica F92]
gi|115130388|gb|ABI83575.1| lysine--tRNA ligase [Francisella tularensis subsp. holarctica
OSU18]
gi|156253979|gb|ABU62485.1| lysyl-tRNA synthetase [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|407294540|gb|AFT93446.1| lysyl-tRNA synthetase [Francisella tularensis subsp. holarctica
FSC200]
gi|421952263|gb|AFX71512.1| lysyl-tRNA ligase [Francisella tularensis subsp. holarctica F92]
Length = 576
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 223/442 (50%), Positives = 314/442 (71%), Gaps = 13/442 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNY-DIGDIIGAKGTLF 59
+L+RVMGK SFI LQD +G +IQ+Y+ + Y FKN D+GDI+G GT+F
Sbjct: 147 VLRRVMGKASFITLQDYTG-----RIQVYLKKSDLPDGQYETFKNLCDLGDIVGITGTMF 201
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KTNTGELS++ + +++TK++RPLP+KF L++QE++YR RY+DLI NE R+VFK R++
Sbjct: 202 KTNTGELSVEANHFEILTKAIRPLPDKFHGLADQEMRYRQRYVDLITNEKAREVFKVRSK 261
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
++S IR++ ++ DFMEVETP++H GGA AKPF THHN+L+M ++LRIAPELYLKRL++
Sbjct: 262 VVSFIRNYFDRLDFMEVETPMMHVLQGGAAAKPFKTHHNALDMPLYLRIAPELYLKRLVV 321
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF +++EIN+NFRNEGIS RHNPEFTM+EFY AY +Y LM TE M+ K++ + IG+
Sbjct: 322 GGFERVYEINRNFRNEGISSRHNPEFTMLEFYMAYADYNDLMDLTEDMLSKLVQEVIGSE 381
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++Y ++F +E+++++++I KY + DL K +K+ K L
Sbjct: 382 ILEYGEYKINFGGKYERISMVDSIVKYNDDITKEDLVTFESAKKIAEKLKIKVEAYHELG 441
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+L +I FEET E +L PT+IT+YP +SPLAR+ + N T+RFE FI E+
Sbjct: 442 HLINEI-----FEETVEHQLIQPTFITDYPAVVSPLARRQD-GNPEFTDRFEFFIGAREV 495
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
ANGFSELND E+Q+ RF+ Q++ + E + YD DYI ALEYGMPP +G GIG+DRL
Sbjct: 496 ANGFSELNDAEDQAERFRKQVEAAASGDDE-AMPYDKDYIRALEYGMPPTAGQGIGIDRL 554
Query: 420 IMLLTNSKNIRDVILFPHLRNE 441
+M LTNS++IRDVILFPH++ E
Sbjct: 555 VMYLTNSQSIRDVILFPHMKPE 576
>gi|312959347|ref|ZP_07773864.1| lysyl-tRNA synthetase, class II [Pseudomonas fluorescens WH6]
gi|311286064|gb|EFQ64628.1| lysyl-tRNA synthetase, class II [Pseudomonas fluorescens WH6]
Length = 500
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 220/441 (49%), Positives = 314/441 (71%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + + K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLSEETLASVKTWDMGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L ++++S++L+TKSLRPLP+K L++ E +YR RY+DLI+NE+ R+ F+ R+
Sbjct: 124 ARSGKGDLYVEMTSVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEDVRQTFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ + DF+EVETP+L PGGA AKPF THHN+L+M+MFLRIAPELYLKRL+
Sbjct: 184 QVIAHIRSFLMQRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +GT
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGT 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DL + ++ KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTADDLNDIDKARAIAKKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+ N EN N+T+RFELFI G E
Sbjct: 359 GFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDENPNVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFMAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 477 LVMLLTNSPSIRDVILFPHMR 497
>gi|260902719|ref|ZP_05911114.1| lysine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
gi|308107650|gb|EFO45190.1| lysine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
Length = 505
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 222/443 (50%), Positives = 312/443 (70%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
R+M K F+++Q+TSG +IQ Y E+ K L ++ DIGDIIG KG L K+
Sbjct: 73 RIMAKRGPFLVIQETSG-----RIQAYADKEV-QKELKEKYQGLDIGDIIGVKGALHKSG 126
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE++YR RY+DLI+NE++R F R++++S
Sbjct: 127 KGDLYVNMEEYELLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSRNAFVVRSKVMS 186
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM FMEVETP++H PGGA A+PFITHHN+L+M M+LRIAPELYLKRL++GGF
Sbjct: 187 AIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPMYLRIAPELYLKRLVVGGF 246
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
+++FEIN+NFRNEG+SPRHNPEFTM+EFY AY +Y LM FTE+++ + ++ +G+T +
Sbjct: 247 DRVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDFTEELLSSVALEVLGSTSMP 306
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y ++F + ++++ EAIK Y P + +I DLQN+ + S K ++ +
Sbjct: 307 YGEDTVEFGGKYARMSMFEAIKHYNPDHAKIQALTEEDLQNRELMVSIAKSVHVEVEPFW 366
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E KL PT+IT YP +ISPLAR+S+ +N T+RFE FI G
Sbjct: 367 TCGQLLEEI-----FGETAEPKLMQPTFITGYPADISPLARRSD-DNPFFTDRFEFFIGG 420
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND E+Q RFK Q++ K + E + +YD DYI ALE+G+PP +G GIG+
Sbjct: 421 REVANGFSELNDAEDQDARFKAQVEAKESGDDE-AMFYDADYITALEHGLPPTAGQGIGI 479
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL+MLLTN+ IRDVILFP +R
Sbjct: 480 DRLVMLLTNTHTIRDVILFPAMR 502
>gi|398997623|ref|ZP_10700441.1| lysyl-tRNA synthetase (class II) [Pseudomonas sp. GM21]
gi|398123598|gb|EJM13143.1| lysyl-tRNA synthetase (class II) [Pseudomonas sp. GM21]
Length = 539
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 219/441 (49%), Positives = 316/441 (71%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + ++ K +D+GDII A+GTL
Sbjct: 108 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLSEDTLAAVKTWDMGDIIAAEGTL 162
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L ++++S++L+TKSLRPLP+K L++ E +YR RY+DLI+NE+ R+ F+ R+
Sbjct: 163 ARSGKGDLYVEMTSVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEDVRQTFRVRS 222
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ + DF+EVETP+L PGGA AKPF THHN+L+M MFLRIAPELYLKRL+
Sbjct: 223 QVIAHIRTFLMQRDFLEVETPMLQTIPGGAAAKPFETHHNALDMGMFLRIAPELYLKRLV 282
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 283 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGS 342
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DLQ+ ++ KK + K+L
Sbjct: 343 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTAADLQDIDTARAIAKK-----SGAKVL 397
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+ N +N N+T+RFELFI G E
Sbjct: 398 GFEGLGKLQVMIFEELVEHKLEQPHFITEYPFEVSPLARR-NDDNPNVTDRFELFIGGRE 456
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 457 IANAYSELNDAEDQAERFMAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 515
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 516 LVMLLTNSPSIRDVILFPHMR 536
>gi|254368388|ref|ZP_04984405.1| lysine-tRNA ligase [Francisella tularensis subsp. holarctica
FSC022]
gi|157121282|gb|EDO65483.1| lysine-tRNA ligase [Francisella tularensis subsp. holarctica
FSC022]
Length = 576
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 223/442 (50%), Positives = 314/442 (71%), Gaps = 13/442 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNY-DIGDIIGAKGTLF 59
+L+RVMGK SFI LQD +G +IQ+Y+ + Y FKN D+GDI+G GT+F
Sbjct: 147 VLRRVMGKASFITLQDYTG-----RIQVYLKKSDLPDGQYETFKNLCDLGDIVGITGTMF 201
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KTNTGELS++ + +++TK++RPLP+KF L++QE++YR RY+DLI NE R+VFK R++
Sbjct: 202 KTNTGELSVEANHFEILTKAIRPLPDKFHGLADQEMRYRQRYVDLITNEKAREVFKVRSK 261
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
++S IR++ ++ DFMEVETP++H GGA AKPF THHN+L+M ++LRIAPELYLKRL++
Sbjct: 262 VVSFIRNYFDRLDFMEVETPMMHVLQGGAAAKPFKTHHNALDMPLYLRIAPELYLKRLVV 321
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF +++EIN+NFRNEGIS RHNPEFTM+EFY AY +Y LM TE M+ K++ + IG+
Sbjct: 322 GGFERVYEINRNFRNEGISSRHNPEFTMLEFYMAYADYNDLMDLTEDMLSKLVQEVIGSE 381
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++Y ++F +E+++++++I KY + DL K +K+ K L
Sbjct: 382 ILEYGEYKINFGGKYERISMVDSIVKYNDDITKEDLVTFESAKKIAEKLKIKVEAYHELG 441
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+L +I FEET E +L PT+IT+YP +SPLAR+ + N T+RFE FI E+
Sbjct: 442 HLINEI-----FEETVEHQLIQPTFITDYPAVVSPLARRQD-GNPEFTDRFEFFIGAREV 495
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
ANGFSELND E+Q+ RF+ Q++ + E + YD DYI ALEYGMPP +G GIG+DRL
Sbjct: 496 ANGFSELNDAEDQAERFRKQVEAAASGDDE-AMPYDKDYIRALEYGMPPTAGQGIGIDRL 554
Query: 420 IMLLTNSKNIRDVILFPHLRNE 441
+M LTNS++IRDVILFPH++ E
Sbjct: 555 VMYLTNSQSIRDVILFPHMKPE 576
>gi|403673737|ref|ZP_10936027.1| lysyl-tRNA ligase [Acinetobacter sp. NCTC 10304]
Length = 509
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 221/446 (49%), Positives = 316/446 (70%), Gaps = 26/446 (5%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G++ SF+++QD +G +IQLY+ + + K+ K D+GDII A+G +
Sbjct: 76 KVAGRVMLNRGSFMVIQDMTG-----RIQLYVDRKGLPKDTLETIKGLDLGDIIAAEGYI 130
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L + + +L+TKSLRPLP+KF L++ E+KYR RY+DLI+NE TRK F+ R
Sbjct: 131 GRSGKGDLYVHLEGFELLTKSLRPLPDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRA 190
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
++++ IR F+ FMEVETP++H PGGA A+PF THHN+L+M +FLRIAPELYLKRL+
Sbjct: 191 KVVAGIRAFLTNERFMEVETPMMHVIPGGASARPFETHHNALDMPLFLRIAPELYLKRLV 250
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF ++FEIN+NFRNEG+S RHNPEFTMIEFY AY +Y LM TE M++K+ +D +GT
Sbjct: 251 VGGFERVFEINRNFRNEGVSTRHNPEFTMIEFYQAYADYKDLMALTENMLEKLALDILGT 310
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFL----KSELK-KINPKFN 293
T + YQG + F F+K+++ +AI + PQ+ ++ ++ FL + ELK ++ P F
Sbjct: 311 TDVPYQGEVFSFKGPFKKISMFDAILENNPQFTPENVGDREFLAKFVREELKEEVKPSFG 370
Query: 294 QKKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELF 353
K LQ ++FEET ETKL PT+IT YP E SPLAR+ N +N +IT+RFE F
Sbjct: 371 LGK---------LQTIVFEETVETKLRQPTFITEYPAETSPLARR-NDDNPHITDRFEFF 420
Query: 354 IIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCG 413
I G E+ANGFSELNDP +Q+ RF+ Q+ K+ + E + +YD +++ ALEYG+PP +G G
Sbjct: 421 IGGRELANGFSELNDPIDQAERFQAQVAEKDAGDDE-AMHYDAEFVEALEYGLPPTAGEG 479
Query: 414 IGVDRLIMLLTNSKNIRDVILFPHLR 439
IG+DRL+ML ++ +IRDVILFPH+R
Sbjct: 480 IGIDRLVMLFADAPSIRDVILFPHMR 505
>gi|343509735|ref|ZP_08746997.1| lysyl-tRNA synthetase [Vibrio scophthalmi LMG 19158]
gi|343514930|ref|ZP_08751995.1| lysyl-tRNA synthetase [Vibrio sp. N418]
gi|342799296|gb|EGU34871.1| lysyl-tRNA synthetase [Vibrio sp. N418]
gi|342803532|gb|EGU38882.1| lysyl-tRNA synthetase [Vibrio scophthalmi LMG 19158]
Length = 511
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 221/443 (49%), Positives = 311/443 (70%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM K F++LQ+TSG IQ Y +++ + K L + DIGDIIG KG L K+
Sbjct: 78 RVMAKRGPFLLLQETSG-----NIQAY-ADKAVQKVLKEQYHGLDIGDIIGVKGALHKSG 131
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE++YR RY+DLI+NE++R FK R++++S
Sbjct: 132 KGDLYVNMEEFELLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSRNAFKIRSKLVS 191
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR FME FMEVETP++ PGGA A+PFITHHN+L+ +MFLRIAPELYLKRL++GGF
Sbjct: 192 AIRRFMESKRFMEVETPMMQVIPGGASARPFITHHNALDQQMFLRIAPELYLKRLVVGGF 251
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
++FEIN+NFRNEG+SPRHNPEFTMIEFY AY +Y LM TE+M+ + ++ +G T +
Sbjct: 252 ERVFEINRNFRNEGLSPRHNPEFTMIEFYMAYADYKDLMDLTEEMLSTVALEILGATAMP 311
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEID------LQNKLFLKSELKKINPKFNQKK 296
Y ++++F + ++T+++AIK Y P++ I +Q++ + S K ++ +
Sbjct: 312 YGDQMVEFGGQYARMTMLDAIKHYNPEHEAIQALTEEGVQDRDLMVSIAKSLDIYVEKFW 371
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E +L PT+IT YP +ISPLAR+S+ +N T+RFE FI G
Sbjct: 372 TCGQLLEEI-----FGETAEPQLIQPTFITGYPADISPLARRSD-DNAFFTDRFEFFIGG 425
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND E+Q RFK+Q+D K+ + E + +YD DYI ALE+G+PP +G GIG+
Sbjct: 426 REVANGFSELNDAEDQDARFKSQVDAKDAGDDE-AMFYDADYITALEHGLPPTAGQGIGI 484
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL ML TN+ IRDVILFP +R
Sbjct: 485 DRLAMLFTNTHTIRDVILFPAMR 507
>gi|400405839|ref|YP_006588698.1| lysyl-tRNA synthetase [secondary endosymbiont of Ctenarytaina
eucalypti]
gi|400364202|gb|AFP85270.1| lysyl-tRNA synthetase (class II) [secondary endosymbiont of
Ctenarytaina eucalypti]
Length = 514
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 221/440 (50%), Positives = 307/440 (69%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK +FI LQD GKIQLY++ + + + YT+ FK +D+GDI+GA+G LF
Sbjct: 76 MSRRIMGKAAFITLQDV-----GGKIQLYVAQDDLPNSQYTEQFKKWDLGDILGARGVLF 130
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELS+ + ++++TK++RPLP+KF L++QE +YR RY+DLI NE +RK FK R++
Sbjct: 131 KTRTGELSVHCNEIRILTKAMRPLPDKFHGLADQETRYRQRYLDLIANEESRKTFKVRSR 190
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM DF+EVETP++ PGGA A+PFITHHN+LN+ M+LRIAPELYLKRL++
Sbjct: 191 IMAEIRRFMIDRDFIEVETPMMQTIPGGAAARPFITHHNALNIDMYLRIAPELYLKRLVV 250
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEG+SP HNPEFTM+E Y AY +Y LM E + + + +G+
Sbjct: 251 GGFERVFEINRNFRNEGLSPYHNPEFTMMELYMAYADYRDLMVLVENLFRTLTEQILGSN 310
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y ++ DF K F ++T+ EAI P+ L + L + + + + ++ L
Sbjct: 311 VVHYGDQIFDFGKPFSQITMKEAICHVRPETLPESLDDMLSATAIAESLGIQLDKAWGLG 370
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
++ +I FEE+ + L PT++T+YP E+SPLAR+ N N T+RFE FI G EI
Sbjct: 371 RVQNEI-----FEESAVSHLIQPTFVTDYPAEVSPLARR-NDANPFFTDRFECFIGGREI 424
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELNDPE+Q+VRF Q K + E + +YD DY+ ALEYG+PP +G GIG+DRL
Sbjct: 425 GNGFSELNDPEDQAVRFSEQACAKEAGDYE-AMFYDEDYVTALEYGLPPTAGLGIGLDRL 483
Query: 420 IMLLTNSKNIRDVILFPHLR 439
I+LLTN IRDVILFP LR
Sbjct: 484 ILLLTNKHTIRDVILFPVLR 503
>gi|399521690|ref|ZP_10762430.1| lysyl-tRNA synthetase [Pseudomonas pseudoalcaligenes CECT 5344]
gi|399110928|emb|CCH38990.1| lysyl-tRNA synthetase [Pseudomonas pseudoalcaligenes CECT 5344]
Length = 576
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 218/441 (49%), Positives = 313/441 (70%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I +F+++QDTSG ++Q+Y++ + + K++D+GDII A+GTL
Sbjct: 145 KVAGRIMLNRGAFMVIQDTSG-----RLQVYVNRKTLPAEQLEAVKHFDLGDIIAAEGTL 199
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L + + +++L+TKSLRPLP+K L++ E +YR RY+DLI+NE R F+ R+
Sbjct: 200 ARSGKGDLYVDMQNVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEEVRHTFRVRS 259
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ + F+EVETP+L PGGA AKPF THHN+L+M+MFLRIAPELYLKRL+
Sbjct: 260 QVIAHIRRFLNERGFLEVETPMLQTIPGGAAAKPFETHHNALDMQMFLRIAPELYLKRLV 319
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ + +G+
Sbjct: 320 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYRDNMDLTEELFRELALAVLGS 379
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P E DL + ++ KK K+L
Sbjct: 380 TDVPYGDKVFHFGEPFVRLSVYDSILKYNPDITEADLNDVEKARAIAKKAG-----AKVL 434
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
+ LQ+M+FEE E+KL P +IT YP E+SPLAR+ N +N N+T+RFELFI G E
Sbjct: 435 GHEGLGKLQVMIFEELVESKLEQPHFITEYPFEVSPLARR-NDDNPNVTDRFELFIGGRE 493
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + +YD D+I ALEYGMPP +G GIG+DR
Sbjct: 494 IANAYSELNDAEDQAERFLAQVAEKDAGDDE-AMHYDADFIRALEYGMPPTAGEGIGIDR 552
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 553 LVMLLTNSPSIRDVILFPHMR 573
>gi|395648094|ref|ZP_10435944.1| lysyl-tRNA ligase [Pseudomonas extremaustralis 14-3 substr. 14-3b]
Length = 500
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 220/441 (49%), Positives = 314/441 (71%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + + K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLSEETLASVKTWDMGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L ++++S++L+TKSLRPLP+K L++ E +YR RY+DLI+NE+ R+ F+ R+
Sbjct: 124 ARSGKGDLYVEMTSVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEDVRQTFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ K DF+EVETP+L PGGA AKPF THHN+L+M+MFLRIAPELYLKRL+
Sbjct: 184 QVIAHIRSFLMKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGS 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DL + ++ KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTADDLNDIDKARAIAKKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+ N EN N+T+RFELFI G E
Sbjct: 359 GFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDENPNVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFMAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 477 LVMLLTNSPSIRDVILFPHMR 497
>gi|422587056|ref|ZP_16661727.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. morsprunorum str.
M302280]
gi|330872775|gb|EGH06924.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. morsprunorum str.
M302280]
Length = 500
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 217/441 (49%), Positives = 317/441 (71%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + + + K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLPEETLAEVKTWDLGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L ++++S++L+TKSLRPLP+K L++ E +YR RY+DLI+NE+ R+ F+ R+
Sbjct: 124 ARSGKGDLYVEMTSVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEDVRETFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ + DF+EVETP+L PGGA AKPF THHN+L+++MFLRIAPELYLKRL+
Sbjct: 184 QVIAHIRSFLMQRDFLEVETPMLQTIPGGAAAKPFETHHNALDLEMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGS 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DLQ+ ++ KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTAADLQDVDKARAIAKKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+ N +N N+T+RFELFI G E
Sbjct: 359 GFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDDNPNVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF+ Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFQAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLT+S +IRDVILFPH+R
Sbjct: 477 LVMLLTDSPSIRDVILFPHMR 497
>gi|91226782|ref|ZP_01261435.1| lysyl-tRNA synthetase [Vibrio alginolyticus 12G01]
gi|91188913|gb|EAS75197.1| lysyl-tRNA synthetase [Vibrio alginolyticus 12G01]
Length = 505
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 220/443 (49%), Positives = 315/443 (71%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
R+M K F+++Q+TSG +IQ Y +++ + K L ++ DIGDIIG KG L K+
Sbjct: 73 RIMAKRGPFLVIQETSG-----RIQAY-ADKAVQKVLKEKYQGLDIGDIIGVKGALHKSG 126
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE++YR RY+DLI+NE++R+ F R++++S
Sbjct: 127 KGDLYVNMEEYELLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSRQAFVVRSKVMS 186
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM FMEVETP++H PGGA A+PFITHHN+L+M M+LRIAPELYLKRL++GGF
Sbjct: 187 AIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPMYLRIAPELYLKRLVVGGF 246
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
+++FEIN+NFRNEG+SPRHNPEFTM+EFY AY +Y LM TE+++ + + +G+T +
Sbjct: 247 DRVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVAQEVLGSTSMP 306
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y ++F ++ ++++ EAIK Y P +++I DLQN+ + S K ++ +
Sbjct: 307 YGDETVEFGGTYTRMSMFEAIKHYNPDHSQIQALTEEDLQNRDLMVSIAKSVHVEVEPFW 366
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E KL PT+IT YP +ISPLAR+S+ +N T+RFE FI G
Sbjct: 367 TCGQLLEEI-----FGETAEPKLMQPTFITGYPADISPLARRSD-DNPFFTDRFEFFIGG 420
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND E+Q RFK Q++ K + E + +YD DYI ALE+G+PP +G GIG+
Sbjct: 421 REVANGFSELNDAEDQDARFKAQVEAKESGDDE-AMFYDADYITALEHGLPPTAGQGIGI 479
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL+MLLTN+ IRDVILFP +R
Sbjct: 480 DRLVMLLTNTHTIRDVILFPAMR 502
>gi|28868707|ref|NP_791326.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. tomato str. DC3000]
gi|213969084|ref|ZP_03397223.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
gi|301384022|ref|ZP_07232440.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. tomato Max13]
gi|302058728|ref|ZP_07250269.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. tomato K40]
gi|302131690|ref|ZP_07257680.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|422657725|ref|ZP_16720164.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
M302278]
gi|38258314|sp|Q886S6.1|SYK_PSESM RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|28851946|gb|AAO55021.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. tomato str. DC3000]
gi|213926082|gb|EEB59638.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
gi|331016329|gb|EGH96385.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
M302278]
Length = 500
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 217/441 (49%), Positives = 317/441 (71%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + + + K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLPEETLAEVKTWDLGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L ++++S++L+TKSLRPLP+K L++ E +YR RY+DLI+NE+ R+ F+ R+
Sbjct: 124 ARSGKGDLYVEMTSVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEDVRETFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ + DF+EVETP+L PGGA AKPF THHN+L+++MFLRIAPELYLKRL+
Sbjct: 184 QVIAHIRSFLMQRDFLEVETPMLQTIPGGAAAKPFETHHNALDLEMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGS 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DLQ+ ++ KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTAADLQDVDKARAIAKKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+ N +N N+T+RFELFI G E
Sbjct: 359 GFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDDNPNVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF+ Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFQAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLT+S +IRDVILFPH+R
Sbjct: 477 LVMLLTDSPSIRDVILFPHMR 497
>gi|350530269|ref|ZP_08909210.1| lysyl-tRNA synthetase [Vibrio rotiferianus DAT722]
Length = 510
Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust.
Identities = 219/443 (49%), Positives = 314/443 (70%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
R+M K F+++Q+TSG +IQ Y +++ + K L ++ DIGDIIG KG L K+
Sbjct: 78 RIMAKRGPFLVIQETSG-----RIQAY-ADKAVQKVLKDQYQGLDIGDIIGVKGALHKSG 131
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE++YR RY+DLI+NE +R+ F R++++S
Sbjct: 132 KGDLYVNMEEYELLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNEESRQAFVVRSKVMS 191
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM FMEVETP++H PGGA A+PFITHHN+L+M M+LRIAPELYLKRL++GGF
Sbjct: 192 AIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPMYLRIAPELYLKRLVVGGF 251
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
+++FEIN+NFRNEG+SPRHNPEFTM+EFY AY +Y LM TE+++ + ++ +G+T +
Sbjct: 252 DRVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLGSTSMP 311
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y ++F ++ ++++ EAIK Y P + +I D+QN+ + S K ++ +
Sbjct: 312 YGDDTVEFGGTYTRMSMFEAIKHYNPDHAQIQALTEEDIQNRDLMVSIAKSVHVEVESFW 371
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E KL PT+IT YP +ISPLAR+S+ +N T+RFE FI G
Sbjct: 372 TCGQLLEEI-----FGETAEPKLMQPTFITGYPADISPLARRSD-DNPFFTDRFEFFIGG 425
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND E+Q RFK Q++ K + E + +YD DYI ALE+G+PP +G GIG+
Sbjct: 426 REVANGFSELNDAEDQDARFKAQVEAKESGDDE-AMFYDADYITALEHGLPPTAGQGIGI 484
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL+MLLTN+ IRDVILFP +R
Sbjct: 485 DRLVMLLTNTHTIRDVILFPAMR 507
>gi|262368776|ref|ZP_06062105.1| lysyl-tRNA synthetase [Acinetobacter johnsonii SH046]
gi|262316454|gb|EEY97492.1| lysyl-tRNA synthetase [Acinetobacter johnsonii SH046]
Length = 508
Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust.
Identities = 221/445 (49%), Positives = 316/445 (71%), Gaps = 22/445 (4%)
Query: 4 RVM-GKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM + SFI++QD +G +IQLY++ + + K+ D+GDII KG + ++
Sbjct: 80 RVMLNRGSFIVIQDMTG-----RIQLYVARKELAPETLETIKSLDLGDIIAVKGYIGRSG 134
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TKSLRPLP+KF L++ E+KYR RY+DLI+NE TRK F+ R +++S
Sbjct: 135 KGDLYVHIEHFELLTKSLRPLPDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRAKVVS 194
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
IR F+ + FMEVETP++H PGGA A+PF THHN+L+M +FLRIAPELYLKRL++GGF
Sbjct: 195 GIRAFLTEQRFMEVETPMMHVIPGGASARPFETHHNALDMPLFLRIAPELYLKRLVVGGF 254
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
++FEIN+NFRNEG+S RHNPEFTMIEFY AY +Y LM+ TE M++++ +D +G+T +
Sbjct: 255 ERVFEINRNFRNEGVSTRHNPEFTMIEFYQAYADYKDLMELTENMLERLALDILGSTDVP 314
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFL----KSELK-KINPKFNQKKI 297
Y + F F+K+++ +AI + PQ+ ++ ++ FL + ELK ++ P F K
Sbjct: 315 YGEEVYSFKGPFKKISMFDAILAHNPQFTPENVNDREFLAKFVQEELKEQVKPGFGLGK- 373
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
LQ ++FEET ET+L PT+IT YP E SPLAR+ N N +IT+RFE FI G
Sbjct: 374 --------LQTIVFEETVETQLRQPTFITEYPAETSPLARR-NDHNPHITDRFEFFIGGR 424
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
E+ANGFSELNDP +Q+ RF+ Q+ K+ + E + +YD D++ ALEYG+PP +G GIG+D
Sbjct: 425 ELANGFSELNDPIDQAERFQAQVSEKDAGDDE-AMHYDADFVEALEYGLPPTAGEGIGID 483
Query: 418 RLIMLLTNSKNIRDVILFPHLRNEN 442
RL+ML N+ +IRDVILFPH+R++N
Sbjct: 484 RLVMLFANAASIRDVILFPHMRHKN 508
>gi|15837714|ref|NP_298402.1| lysyl-tRNA synthetase [Xylella fastidiosa 9a5c]
gi|11387145|sp|Q9PEB6.1|SYK_XYLFA RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|9106069|gb|AAF83922.1|AE003947_2 lysyl-tRNA synthetase [Xylella fastidiosa 9a5c]
Length = 506
Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust.
Identities = 221/444 (49%), Positives = 312/444 (70%), Gaps = 16/444 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M KR+MGK SF +QD SG +IQL I + ++G++ Y FK D+GDII +G L +
Sbjct: 77 MAKRLMGKASFAQIQDESG-----RIQLLIQSNVLGEDSYAAFKVLDVGDIIAVEGGLTR 131
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+KV+ L+L+TK+LRPLP+K+ L++ E +YR RY+DLI+ +R++F KR++I
Sbjct: 132 TRTGELSVKVNVLRLLTKALRPLPDKWHGLTDVEQRYRQRYVDLIVTPESREIFIKRSKI 191
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I ++R +++ F+EVETP++H PGGA AKPF+T+HN+L+++++LR+APELYLKRL++G
Sbjct: 192 IRALRTWLDARLFLEVETPMMHYIPGGAAAKPFVTYHNALDLELYLRVAPELYLKRLVVG 251
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G +++EIN+NFRNEG+S RHNPEFTM+E Y AY+ Y +M E MI+ +GTT+
Sbjct: 252 GLERVYEINRNFRNEGVSTRHNPEFTMLELYEAYSTYHEVMDLAETMIRDTAQSVLGTTQ 311
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYN--EIDLQNKLFLKSELKKINPKFNQKKIL 298
+ + G +D F + + EA+ + P+ + E ++ L L E KI K+
Sbjct: 312 VIWDGAQIDLGPIFRRWRMDEAVCHHNPEISVAECTDRDALLLHCERLKI-------KVK 364
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
++ L L +FE T E L PT+IT++P EISPLAR+S+IE T+RFELFI G E
Sbjct: 365 SSYGWGRLLLSIFEATVEHTLIQPTFITDHPVEISPLARESDIE-PGYTDRFELFINGKE 423
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IANGFSELNDPEEQ++RF+ Q++ K + E + YYD DYI ALEYGM P G GIGVDR
Sbjct: 424 IANGFSELNDPEEQAMRFQKQVEAKEGGDDE-AMYYDADYIRALEYGMAPTGGLGIGVDR 482
Query: 419 LIMLLTNSKNIRDVILFPHLRNEN 442
L+MLLT S +IRDV+LFP++R E
Sbjct: 483 LVMLLTGSTSIRDVLLFPYMRPER 506
>gi|330504611|ref|YP_004381480.1| lysyl-tRNA synthetase [Pseudomonas mendocina NK-01]
gi|328918897|gb|AEB59728.1| lysyl-tRNA synthetase [Pseudomonas mendocina NK-01]
Length = 500
Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust.
Identities = 220/441 (49%), Positives = 311/441 (70%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
++ G+I +F++LQDTSG ++Q+Y+ + + K +D+GDII A+GTL
Sbjct: 69 KIAGRIMLNRGAFMVLQDTSG-----RLQVYVDRKGLPAETLEAIKTWDLGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L + +++++L+TKSLRPLP+K L++ E +YR RY+DLI+NE TR F+ R+
Sbjct: 124 ARSGKGDLYVHMTNVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEETRHTFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ F+EVETP+L PGGA AKPF THHN+L+M MFLRIAPELYLKRL+
Sbjct: 184 QVIAHIRRFLNDRGFLEVETPMLQTIPGGAAAKPFETHHNALDMAMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ + +GT
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYRDNMDLTEELFRELALAVLGT 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P E DL + +S KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFVRLSVYDSILKYNPDITEADLNDVDKARSIAKKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
+ LQ+M+FEE E+KL P +IT YP E+SPLAR+ N +N N+T+RFELFI G E
Sbjct: 359 GHEGLGKLQVMIFEELVESKLEQPHFITEYPFEVSPLARR-NDQNPNVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFLAQVAEKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 477 LVMLLTNSPSIRDVILFPHMR 497
>gi|326794290|ref|YP_004312110.1| Lysyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
gi|326545054|gb|ADZ90274.1| Lysyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
Length = 500
Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust.
Identities = 216/438 (49%), Positives = 311/438 (71%), Gaps = 12/438 (2%)
Query: 5 VMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTNTG 64
V + +F++LQD +G +IQ Y++ + + L + K +D+GDIIG G + K+ G
Sbjct: 75 VRNRGAFMLLQDMTG-----QIQAYVNRKALSPELLAEQKTWDLGDIIGISGPVHKSGKG 129
Query: 65 ELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIISSI 124
+L I + +L+TKSLRPLP+K + L++ E++YR RY+DLI+N+ +R F+ R++IIS+I
Sbjct: 130 DLYIDMQKAELLTKSLRPLPDKHKGLADMEMRYRQRYVDLIVNQESRTTFEVRSKIISTI 189
Query: 125 RHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGFNK 184
R F+E FMEVETP+L PGGA A+PF+THHN+++M+M++RIAPELYLKRL++GGF +
Sbjct: 190 RRFLEDRRFMEVETPMLQTIPGGATARPFVTHHNAMDMQMYMRIAPELYLKRLVVGGFER 249
Query: 185 IFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKIDYQ 244
+FEIN+NFRNEG+S RHNPEFTMIEFY AY +Y LM TE M++ + +GTT + YQ
Sbjct: 250 VFEINRNFRNEGVSTRHNPEFTMIEFYQAYADYNDLMDLTEDMLRTVSEKVLGTTNVTYQ 309
Query: 245 GRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNNLKKD 304
G+ DF F ++T++E+I + P+ DL + KK++ L L +
Sbjct: 310 GQEFDFGAPFARMTMLESILHFNPELTVEDLDTLEKATAVAKKLHIDVKPIWGLGKLWTE 369
Query: 305 ILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIANGFS 364
I FEET E+KL PT+IT YP E+SPLAR+ N +N IT+RFE F+ G EIANGFS
Sbjct: 370 I-----FEETAESKLIQPTFITEYPAEVSPLARR-NDDNEFITDRFEFFVGGREIANGFS 423
Query: 365 ELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLIMLLT 424
ELNDPE+Q+ RF+ Q++ K+ + E + +YD DYI+ALEYG+PP +G GIG+DRL+ML T
Sbjct: 424 ELNDPEDQAERFRRQVEEKDAGDDE-AMHYDADYINALEYGLPPTAGEGIGIDRLVMLFT 482
Query: 425 NSKNIRDVILFPHLRNEN 442
+S +IRDV+LFPH++ ++
Sbjct: 483 DSPSIRDVLLFPHMKPQD 500
>gi|424056403|ref|ZP_17793924.1| lysyl-tRNA synthetase [Acinetobacter nosocomialis Ab22222]
gi|425740924|ref|ZP_18859083.1| lysine--tRNA ligase [Acinetobacter baumannii WC-487]
gi|445439226|ref|ZP_21441563.1| lysine--tRNA ligase [Acinetobacter baumannii OIFC021]
gi|407441443|gb|EKF47949.1| lysyl-tRNA synthetase [Acinetobacter nosocomialis Ab22222]
gi|425493771|gb|EKU59995.1| lysine--tRNA ligase [Acinetobacter baumannii WC-487]
gi|444752180|gb|ELW76869.1| lysine--tRNA ligase [Acinetobacter baumannii OIFC021]
Length = 509
Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust.
Identities = 221/446 (49%), Positives = 316/446 (70%), Gaps = 26/446 (5%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G++ SF+++QD +G +IQLY+ + + K+ K D+GDII A+G +
Sbjct: 76 KVAGRVMLNRGSFMVIQDMTG-----RIQLYVDRKGLPKDTLETIKGLDLGDIIAAEGYI 130
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L + + +L+TKSLRPLP+KF L++ E+KYR RY+DLI+NE TRK F+ R
Sbjct: 131 GRSGKGDLYVHLEGFELLTKSLRPLPDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRA 190
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
++++ IR F+ FMEVETP++H PGGA A+PF THHN+L+M +FLRIAPELYLKRL+
Sbjct: 191 KVVAGIRAFLTNERFMEVETPMMHVIPGGASARPFETHHNALDMPLFLRIAPELYLKRLV 250
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF ++FEIN+NFRNEG+S RHNPEFTMIEFY AY +Y LM TE M++K+ +D +GT
Sbjct: 251 VGGFERVFEINRNFRNEGVSTRHNPEFTMIEFYQAYADYKDLMALTENMLEKLALDILGT 310
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFL----KSELK-KINPKFN 293
T + YQG + F F+K+++ +AI + PQ+ ++ ++ FL + ELK ++ P F
Sbjct: 311 TDVPYQGEVFSFKGPFKKISMFDAILENNPQFTPENVGDREFLAKFVREELKEEVKPGFG 370
Query: 294 QKKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELF 353
K LQ ++FEET ETKL PT+IT YP E SPLAR+ N +N +IT+RFE F
Sbjct: 371 LGK---------LQTIVFEETVETKLRQPTFITEYPAETSPLARR-NDDNPHITDRFEFF 420
Query: 354 IIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCG 413
I G E+ANGFSELNDP +Q+ RF+ Q+ K+ + E + +YD +++ ALEYG+PP +G G
Sbjct: 421 IGGRELANGFSELNDPIDQAERFQAQVAEKDAGDDE-AMHYDAEFVEALEYGLPPTAGEG 479
Query: 414 IGVDRLIMLLTNSKNIRDVILFPHLR 439
IG+DRL+ML ++ +IRDVILFPH+R
Sbjct: 480 IGIDRLVMLFADAPSIRDVILFPHMR 505
>gi|89257151|ref|YP_514513.1| lysyl-tRNA synthetase [Francisella tularensis subsp. holarctica
LVS]
gi|254368375|ref|ZP_04984393.1| lysyl-tRNA ligase [Francisella tularensis subsp. holarctica 257]
gi|290954113|ref|ZP_06558734.1| lysyl-tRNA synthetase [Francisella tularensis subsp. holarctica
URFT1]
gi|89144982|emb|CAJ80342.1| Lysyl-tRNA synthetase [Francisella tularensis subsp. holarctica
LVS]
gi|134254183|gb|EBA53277.1| lysyl-tRNA ligase [Francisella tularensis subsp. holarctica 257]
Length = 560
Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust.
Identities = 223/442 (50%), Positives = 314/442 (71%), Gaps = 13/442 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNY-DIGDIIGAKGTLF 59
+L+RVMGK SFI LQD +G +IQ+Y+ + Y FKN D+GDI+G GT+F
Sbjct: 131 VLRRVMGKASFITLQDYTG-----RIQVYLKKSDLPDGQYETFKNLCDLGDIVGITGTMF 185
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KTNTGELS++ + +++TK++RPLP+KF L++QE++YR RY+DLI NE R+VFK R++
Sbjct: 186 KTNTGELSVEANHFEILTKAIRPLPDKFHGLADQEMRYRQRYVDLITNEKAREVFKVRSK 245
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
++S IR++ ++ DFMEVETP++H GGA AKPF THHN+L+M ++LRIAPELYLKRL++
Sbjct: 246 VVSFIRNYFDRLDFMEVETPMMHVLQGGAAAKPFKTHHNALDMPLYLRIAPELYLKRLVV 305
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF +++EIN+NFRNEGIS RHNPEFTM+EFY AY +Y LM TE M+ K++ + IG+
Sbjct: 306 GGFERVYEINRNFRNEGISSRHNPEFTMLEFYMAYADYNDLMDLTEDMLSKLVQEVIGSE 365
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++Y ++F +E+++++++I KY + DL K +K+ K L
Sbjct: 366 ILEYGEYKINFGGKYERISMVDSIVKYNDDITKEDLVTFESAKKIAEKLKIKVEAYHELG 425
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+L +I FEET E +L PT+IT+YP +SPLAR+ + N T+RFE FI E+
Sbjct: 426 HLINEI-----FEETVEHQLIQPTFITDYPAVVSPLARRQD-GNPEFTDRFEFFIGAREV 479
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
ANGFSELND E+Q+ RF+ Q++ + E + YD DYI ALEYGMPP +G GIG+DRL
Sbjct: 480 ANGFSELNDAEDQAERFRKQVEAAASGDDE-AMPYDKDYIRALEYGMPPTAGQGIGIDRL 538
Query: 420 IMLLTNSKNIRDVILFPHLRNE 441
+M LTNS++IRDVILFPH++ E
Sbjct: 539 VMYLTNSQSIRDVILFPHMKPE 560
>gi|421505036|ref|ZP_15951976.1| lysyl-tRNA ligase [Pseudomonas mendocina DLHK]
gi|400344259|gb|EJO92629.1| lysyl-tRNA ligase [Pseudomonas mendocina DLHK]
Length = 505
Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust.
Identities = 218/441 (49%), Positives = 313/441 (70%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
++ G+I +F++LQDTSG ++Q+Y+ + + K +D+GDII A+GTL
Sbjct: 74 KIAGRIMLNRGAFMVLQDTSG-----RLQVYVDRKGLPAETLEAIKTWDLGDIIAAEGTL 128
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L + ++S++L+TKSLRPLP+K L++ E +YR RY+DLI+NE TR F+ R+
Sbjct: 129 ARSGKGDLYVNMTSVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEETRHTFRVRS 188
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ + F+EVETP+L PGGA AKPF THHN+L+M+MFLRIAPELYLKRL+
Sbjct: 189 QVIAHIRRFLNERGFLEVETPMLQTIPGGAAAKPFETHHNALDMQMFLRIAPELYLKRLV 248
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ + +GT
Sbjct: 249 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYRDNMDLTEELFRELALAVLGT 308
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P +E DL + ++ KK K+L
Sbjct: 309 TDVPYGDKVFHFGEPFVRLSVYDSILKYNPDISEADLNDVDKARAIAKKAG-----AKVL 363
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
+ LQ+M+FEE E+KL P +IT YP E+SPLAR+ N +N +T+RFELFI G E
Sbjct: 364 GHEGLGKLQVMIFEELVESKLEQPHFITEYPFEVSPLARR-NDQNPAVTDRFELFIGGRE 422
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + ++D D++ ALEYGMPP +G GIG+DR
Sbjct: 423 IANAYSELNDAEDQAERFHAQVAEKDAGDDE-AMHFDADFVRALEYGMPPTAGEGIGIDR 481
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 482 LVMLLTNSPSIRDVILFPHMR 502
>gi|208780603|ref|ZP_03247942.1| lysyl-tRNA synthetase [Francisella novicida FTG]
gi|208743578|gb|EDZ89883.1| lysyl-tRNA synthetase [Francisella novicida FTG]
Length = 560
Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust.
Identities = 222/442 (50%), Positives = 314/442 (71%), Gaps = 13/442 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNY-DIGDIIGAKGTLF 59
+L+RVMGK SFI LQD +G +IQ+Y+ + Y FKN D+GDI+G GT+F
Sbjct: 131 VLRRVMGKASFITLQDYTG-----RIQVYLKKSDLPDGQYETFKNLCDLGDIVGITGTMF 185
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KTNTGELS++ + +++TK++RPLP+KF L++QE++YR RY+DLI NE R+VFK R++
Sbjct: 186 KTNTGELSVEANHFEILTKAIRPLPDKFHGLADQEMRYRQRYVDLITNEKAREVFKVRSK 245
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
++S IR++ ++ DFMEVETP++H GGA AKPF THHN+L+M ++LRIAPELYLKRL++
Sbjct: 246 VVSFIRNYFDRLDFMEVETPMMHVLQGGAAAKPFKTHHNALDMPLYLRIAPELYLKRLVV 305
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF +++EIN+NFRNEG+S RHNPEFTM+EFY AY +Y LM TE M+ K++ + IG+
Sbjct: 306 GGFERVYEINRNFRNEGVSSRHNPEFTMLEFYMAYADYNDLMDLTEDMLSKLVQEVIGSE 365
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++Y ++F +E+++++++I KY + DL K +K+ K L
Sbjct: 366 ILEYGEYKINFGGKYERISMVDSIVKYNDDITKEDLVTFESAKKIAEKLKIKVEAYHELG 425
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+L +I FEET E +L PT+IT+YP +SPLAR+ + N T+RFE FI E+
Sbjct: 426 HLINEI-----FEETVEHQLIQPTFITDYPAVVSPLARRQD-GNPEFTDRFEFFIGAREV 479
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
ANGFSELND E+Q+ RF+ Q++ + E + YD DYI ALEYGMPP +G GIG+DRL
Sbjct: 480 ANGFSELNDAEDQAERFRKQVEAAASGDDE-AMPYDKDYIRALEYGMPPTAGQGIGIDRL 538
Query: 420 IMLLTNSKNIRDVILFPHLRNE 441
+M LTNS++IRDVILFPH++ E
Sbjct: 539 VMYLTNSQSIRDVILFPHMKPE 560
>gi|254372145|ref|ZP_04987637.1| hypothetical protein FTCG_01528 [Francisella tularensis subsp.
novicida GA99-3549]
gi|151569875|gb|EDN35529.1| hypothetical protein FTCG_01528 [Francisella novicida GA99-3549]
Length = 575
Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust.
Identities = 222/442 (50%), Positives = 314/442 (71%), Gaps = 13/442 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNY-DIGDIIGAKGTLF 59
+L+RVMGK SFI LQD +G +IQ+Y+ + Y FKN D+GDI+G GT+F
Sbjct: 146 VLRRVMGKASFITLQDYTG-----RIQVYLKKSDLPDGQYETFKNLCDLGDIVGITGTMF 200
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KTNTGELS++ + +++TK++RPLP+KF L++QE++YR RY+DLI NE R+VFK R++
Sbjct: 201 KTNTGELSVEANHFEILTKAIRPLPDKFHGLADQEMRYRQRYVDLITNEKAREVFKVRSK 260
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
++S IR++ ++ DFMEVETP++H GGA AKPF THHN+L+M ++LRIAPELYLKRL++
Sbjct: 261 VVSFIRNYFDRLDFMEVETPMMHVLQGGAAAKPFKTHHNALDMPLYLRIAPELYLKRLVV 320
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF +++EIN+NFRNEG+S RHNPEFTM+EFY AY +Y LM TE M+ K++ + IG+
Sbjct: 321 GGFERVYEINRNFRNEGVSSRHNPEFTMLEFYMAYADYNDLMDLTEDMLSKLVQEVIGSE 380
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++Y ++F +E+++++++I KY + DL K +K+ K L
Sbjct: 381 ILEYGEYKINFGGKYERISMVDSIVKYNDDITKEDLVTFESAKKIAEKLKIKVEAYHELG 440
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+L +I FEET E +L PT+IT+YP +SPLAR+ + N T+RFE FI E+
Sbjct: 441 HLINEI-----FEETVEHQLIQPTFITDYPAVVSPLARRQD-GNPEFTDRFEFFIGAREV 494
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
ANGFSELND E+Q+ RF+ Q++ + E + YD DYI ALEYGMPP +G GIG+DRL
Sbjct: 495 ANGFSELNDAEDQAERFRKQVEAAASGDDE-AMPYDKDYIRALEYGMPPTAGQGIGIDRL 553
Query: 420 IMLLTNSKNIRDVILFPHLRNE 441
+M LTNS++IRDVILFPH++ E
Sbjct: 554 VMYLTNSQSIRDVILFPHMKPE 575
>gi|71732590|gb|EAO34643.1| Lysyl-tRNA synthetase, class-2 [Xylella fastidiosa subsp. sandyi
Ann-1]
Length = 506
Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust.
Identities = 220/443 (49%), Positives = 313/443 (70%), Gaps = 16/443 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M KR+MGK SF +QD SG +IQL I + ++G++ Y FK D+GDII +G L +
Sbjct: 77 MAKRLMGKASFAQIQDESG-----RIQLLIQSNVLGEDSYAAFKVLDVGDIIAVEGGLTR 131
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+KV+ L+L+TK+LRPLP+K+ L++ E +YR RY+DLI+ +R++F KR++I
Sbjct: 132 TRTGELSVKVNVLRLLTKALRPLPDKWHGLTDVEQRYRQRYVDLIVTPESREIFIKRSKI 191
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I ++R +++ F+EVETP++H PGGA AKPF+T+HN+L+++++LR+APELYLKRL++G
Sbjct: 192 IRALRTWLDARLFLEVETPMMHYIPGGAAAKPFVTYHNALDLELYLRVAPELYLKRLVVG 251
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G +++EIN+NFRNEG+S RHNPEFTM+E Y AY+ Y +M E MI+ +GTT+
Sbjct: 252 GLERVYEINRNFRNEGVSTRHNPEFTMLELYEAYSTYHEVMDLAETMIRDTAQSVLGTTQ 311
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYN--EIDLQNKLFLKSELKKINPKFNQKKIL 298
+ + G +D F + + +A+ + P+ + E ++ L L E KI K+
Sbjct: 312 VIWDGAQIDLGPIFRRWRMDDAVCHHNPEISVAECTDRDALLLHCERLKI-------KVK 364
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
++ L L +FE T E L PT+IT++P EISPLAR+S+IE + T+RFELFI G E
Sbjct: 365 SSYGWGRLLLSIFEATVEHTLIQPTFITDHPVEISPLARESDIE-SGYTDRFELFINGKE 423
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IANGFSELNDPEEQ++RF+ Q++ K + E + YYD DYI ALEYGM P G GIGVDR
Sbjct: 424 IANGFSELNDPEEQAMRFQKQVEAKEGGDDE-AMYYDADYIRALEYGMAPTGGLGIGVDR 482
Query: 419 LIMLLTNSKNIRDVILFPHLRNE 441
L+MLLT S +IRDV+LFP++R E
Sbjct: 483 LVMLLTGSTSIRDVLLFPYMRPE 505
>gi|375264494|ref|YP_005021937.1| lysyl-tRNA synthetase [Vibrio sp. EJY3]
gi|369839818|gb|AEX20962.1| lysyl-tRNA synthetase [Vibrio sp. EJY3]
Length = 505
Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust.
Identities = 218/443 (49%), Positives = 314/443 (70%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
R+M K F+++Q+TSG +IQ Y + ++ K L ++ DIGDIIG KG L K+
Sbjct: 73 RIMAKRGPFLVIQETSG-----RIQAYAAKDV-QKELKAKYQGLDIGDIIGVKGALHKSG 126
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE++YR RY+DLI+NE++RK F R++++S
Sbjct: 127 KGDLYVNMEEYELLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSRKAFIIRSKLVS 186
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM ++EVETP++H PGGA A+PFITHHN+L++ MFLR+APELYLKRL++GGF
Sbjct: 187 AIRNFMSSKGYLEVETPMMHVIPGGATARPFITHHNALDIDMFLRVAPELYLKRLVVGGF 246
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
+++FEIN+NFRNEG+SPRHNPEFTM+EFY AY +Y LM TE+M+ + M+ +G+T +
Sbjct: 247 DRVFEINRNFRNEGLSPRHNPEFTMMEFYQAYADYKDLMDLTEEMLSTVAMEVLGSTSMP 306
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y ++F ++ ++++ EAIK Y P++ EI DLQ++ + + K ++ +
Sbjct: 307 YGEETVEFGGTYARMSMFEAIKHYNPEHAEIQALTEADLQDREKMVAIAKSVHVEVETFW 366
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E +L PT+IT YP +ISPLAR+S+ +N T+RFE FI G
Sbjct: 367 TCGQLLEEI-----FGETAEPQLIQPTFITGYPADISPLARRSD-DNPFFTDRFEFFIGG 420
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND E+Q RFK Q+D K+ + E + +YD DYI ALE+G+PP +G GIG+
Sbjct: 421 REVANGFSELNDAEDQDARFKAQVDAKDAGDDE-AMFYDADYITALEHGLPPTAGQGIGI 479
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL ML TN+ IRDVILFP +R
Sbjct: 480 DRLAMLFTNTHTIRDVILFPAMR 502
>gi|398858444|ref|ZP_10614134.1| lysyl-tRNA synthetase (class II) [Pseudomonas sp. GM79]
gi|398239170|gb|EJN24885.1| lysyl-tRNA synthetase (class II) [Pseudomonas sp. GM79]
Length = 500
Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust.
Identities = 220/441 (49%), Positives = 314/441 (71%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + ++ K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLSEDTLAAVKTWDMGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L ++++S++L+TKSLRPLP+K L++ E +YR RY+DLI+NE R+ F+ R+
Sbjct: 124 ARSGKGDLYVEMTSVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEEVRQTFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ K DF+EVETP+L PGGA AKPF THHN+L+M+MFLRIAPELYLKRL+
Sbjct: 184 QVIAHIRSFLMKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGS 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DL + ++ KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTADDLTDIDKARAIAKKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+ N EN N+T+RFELFI G E
Sbjct: 359 GFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDENPNVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFMAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 477 LVMLLTNSPSIRDVILFPHMR 497
>gi|445401035|ref|ZP_21430336.1| lysine--tRNA ligase [Acinetobacter baumannii Naval-57]
gi|444783162|gb|ELX07024.1| lysine--tRNA ligase [Acinetobacter baumannii Naval-57]
Length = 520
Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust.
Identities = 221/446 (49%), Positives = 316/446 (70%), Gaps = 26/446 (5%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G++ SF+++QD +G +IQLY+ + + K+ K D+GDII A+G +
Sbjct: 87 KVAGRVMLNRGSFMVIQDMTG-----RIQLYVDRKGLPKDTLETIKGLDLGDIIAAEGYI 141
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L + + +L+TKSLRPLP+KF L++ E+KYR RY+DLI+NE TRK F+ R
Sbjct: 142 GRSGKGDLYVHLEGFELLTKSLRPLPDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRA 201
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
++++ IR F+ FMEVETP++H PGGA A+PF THHN+L+M +FLRIAPELYLKRL+
Sbjct: 202 KVVAGIRAFLTNERFMEVETPMMHVIPGGASARPFETHHNALDMPLFLRIAPELYLKRLV 261
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF ++FEIN+NFRNEG+S RHNPEFTMIEFY AY +Y LM TE M++K+ +D +GT
Sbjct: 262 VGGFERVFEINRNFRNEGVSTRHNPEFTMIEFYQAYADYKDLMALTENMLEKLALDILGT 321
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFL----KSELK-KINPKFN 293
T + YQG + F F+K+++ +AI + PQ+ ++ ++ FL + ELK ++ P F
Sbjct: 322 TDVPYQGEVFSFKGPFKKISMFDAILENNPQFTPENVGDREFLAKFVREELKEEVKPSFG 381
Query: 294 QKKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELF 353
K LQ ++FEET ETKL PT+IT YP E SPLAR+ N +N +IT+RFE F
Sbjct: 382 LGK---------LQTIVFEETVETKLRQPTFITEYPAETSPLARR-NDDNPHITDRFEFF 431
Query: 354 IIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCG 413
I G E+ANGFSELNDP +Q+ RF+ Q+ K+ + E + +YD +++ ALEYG+PP +G G
Sbjct: 432 IGGRELANGFSELNDPIDQAERFQAQVAEKDAGDDE-AMHYDAEFVEALEYGLPPTAGEG 490
Query: 414 IGVDRLIMLLTNSKNIRDVILFPHLR 439
IG+DRL+ML ++ +IRDVILFPH+R
Sbjct: 491 IGIDRLVMLFADAPSIRDVILFPHMR 516
>gi|381197604|ref|ZP_09904944.1| lysyl-tRNA synthetase [Acinetobacter lwoffii WJ10621]
Length = 508
Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust.
Identities = 221/445 (49%), Positives = 316/445 (71%), Gaps = 22/445 (4%)
Query: 4 RVM-GKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM + SFI++QD +G +IQLY++ + + K+ D+GDII KG + ++
Sbjct: 80 RVMLNRGSFIVIQDMTG-----RIQLYVARKELAPETLETIKSLDLGDIIAVKGYIGRSG 134
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TKSLRPLP+KF L++ E+KYR RY+DLI+NE TRK F+ R +++S
Sbjct: 135 KGDLYVHIEHFELLTKSLRPLPDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRAKVVS 194
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
IR F+ + FMEVETP++H PGGA A+PF THHN+L+M +FLRIAPELYLKRL++GGF
Sbjct: 195 GIRAFLTEKRFMEVETPMMHVIPGGASARPFETHHNALDMPLFLRIAPELYLKRLVVGGF 254
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
++FEIN+NFRNEG+S RHNPEFTMIEFY AY +Y LM+ TE M++++ +D +G+T +
Sbjct: 255 ERVFEINRNFRNEGVSTRHNPEFTMIEFYQAYADYKDLMELTENMLERLALDILGSTDVP 314
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFL----KSELK-KINPKFNQKKI 297
Y + F F+K+++ +AI + PQ+ ++ ++ FL + ELK ++ P F K
Sbjct: 315 YGEEVYSFKGPFKKISMFDAILAHNPQFTPENVNDREFLAKFVQEELKEQVKPGFGLGK- 373
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
LQ ++FEET ET+L PT+IT YP E SPLAR+ N N +IT+RFE FI G
Sbjct: 374 --------LQTIVFEETVETQLRQPTFITEYPAETSPLARR-NDHNPHITDRFEFFIGGR 424
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
E+ANGFSELNDP +Q+ RF+ Q+ K+ + E + +YD D++ ALEYG+PP +G GIG+D
Sbjct: 425 ELANGFSELNDPIDQAERFQAQVSEKDAGDDE-AMHYDADFVEALEYGLPPTAGEGIGID 483
Query: 418 RLIMLLTNSKNIRDVILFPHLRNEN 442
RL+ML N+ +IRDVILFPH+R++N
Sbjct: 484 RLVMLFANAASIRDVILFPHMRHKN 508
>gi|118496782|ref|YP_897832.1| lysyl-tRNA synthetase [Francisella novicida U112]
gi|194324537|ref|ZP_03058309.1| lysyl-tRNA synthetase [Francisella novicida FTE]
gi|118422688|gb|ABK89078.1| lysyl-tRNA synthetase [Francisella novicida U112]
gi|194321372|gb|EDX18858.1| lysyl-tRNA synthetase [Francisella tularensis subsp. novicida FTE]
Length = 576
Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust.
Identities = 222/442 (50%), Positives = 314/442 (71%), Gaps = 13/442 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNY-DIGDIIGAKGTLF 59
+L+RVMGK SFI LQD +G +IQ+Y+ + Y FKN D+GDI+G GT+F
Sbjct: 147 VLRRVMGKASFITLQDYTG-----RIQVYLKKSDLPDGQYETFKNLCDLGDIVGITGTMF 201
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KTNTGELS++ + +++TK++RPLP+KF L++QE++YR RY+DLI NE R+VFK R++
Sbjct: 202 KTNTGELSVEANHFEILTKAIRPLPDKFHGLADQEMRYRQRYVDLITNEKAREVFKVRSK 261
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
++S IR++ ++ DFMEVETP++H GGA AKPF THHN+L+M ++LRIAPELYLKRL++
Sbjct: 262 VVSFIRNYFDRLDFMEVETPMMHVLQGGAAAKPFKTHHNALDMPLYLRIAPELYLKRLVV 321
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF +++EIN+NFRNEG+S RHNPEFTM+EFY AY +Y LM TE M+ K++ + IG+
Sbjct: 322 GGFERVYEINRNFRNEGVSSRHNPEFTMLEFYMAYADYNDLMDLTEDMLSKLVQEVIGSE 381
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++Y ++F +E+++++++I KY + DL K +K+ K L
Sbjct: 382 ILEYGEYKINFGGKYERISMVDSIVKYNDDITKEDLVTFESAKKIAEKLKIKVEAYHELG 441
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+L +I FEET E +L PT+IT+YP +SPLAR+ + N T+RFE FI E+
Sbjct: 442 HLINEI-----FEETVEHQLIQPTFITDYPAVVSPLARRQD-GNPEFTDRFEFFIGAREV 495
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
ANGFSELND E+Q+ RF+ Q++ + E + YD DYI ALEYGMPP +G GIG+DRL
Sbjct: 496 ANGFSELNDAEDQAERFRKQVEAAASGDDE-AMPYDKDYIRALEYGMPPTAGQGIGIDRL 554
Query: 420 IMLLTNSKNIRDVILFPHLRNE 441
+M LTNS++IRDVILFPH++ E
Sbjct: 555 VMYLTNSQSIRDVILFPHMKPE 576
>gi|190150137|ref|YP_001968662.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
str. AP76]
gi|307263473|ref|ZP_07545088.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13
str. N273]
gi|238692391|sp|B3H1E8.1|SYK_ACTP7 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|189915268|gb|ACE61520.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
str. AP76]
gi|306871116|gb|EFN02845.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13
str. N273]
Length = 500
Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust.
Identities = 227/447 (50%), Positives = 314/447 (70%), Gaps = 25/447 (5%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
MLKRVMGK SF +QD SG +IQLY++ + + + +Y D +D+GDI+GA GTLF
Sbjct: 71 MLKRVMGKASFFTIQDVSG-----QIQLYVARDNLAEGVYADKVSMWDLGDIVGAAGTLF 125
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGEL+++ S ++L+TKSLRPLPNK Q L++QE +YR RY+DLI NE +R+ F R++
Sbjct: 126 KTKTGELTVRCSEVELLTKSLRPLPNKVQGLTDQETRYRQRYLDLISNEESRRTFMIRSK 185
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
++S IR F + DF+EVETP+L PGGA AKPFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 186 MVSGIRQFFLEKDFIEVETPMLQVIPGGAAAKPFITHHNALDVDMYLRIAPELYLKRLVV 245
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTMIE+Y AY +Y LM TE++++K+ +D +GTT
Sbjct: 246 GGFERVFELNRNFRNEGVSVRHNPEFTMIEYYQAYADYHDLMDNTEELLRKLAIDILGTT 305
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKS-ELKK-----INPKFN 293
+ Y + DF K FE++T+ +AI KY DL + F KS E+ K I +
Sbjct: 306 TVPYGEYVFDFGKPFERITMHDAIVKYGNGITREDLDS--FEKSVEIAKGLGIEIQKSWG 363
Query: 294 QKKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELF 353
++N +FEE E +L PT++ +P EISPLAR+ N EN +T+RFELF
Sbjct: 364 LGSVVN---------AIFEEVAEHQLIQPTFLMAHPAEISPLARR-NDENPEVTDRFELF 413
Query: 354 IIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCG 413
I G EI NGFSELND E+Q+ RF Q+ K+ + E + + D D++ ALE+G+PP +G G
Sbjct: 414 IGGREIGNGFSELNDAEDQAERFDAQVAAKDAGDDE-AMFKDEDFVVALEHGLPPTAGEG 472
Query: 414 IGVDRLIMLLTNSKNIRDVILFPHLRN 440
+G+DRL M+ N+ +IRDVILFP +R
Sbjct: 473 LGIDRLAMIFANAPSIRDVILFPAMRQ 499
>gi|169633913|ref|YP_001707649.1| lysyl-tRNA synthetase [Acinetobacter baumannii SDF]
gi|169796805|ref|YP_001714598.1| lysyl-tRNA synthetase [Acinetobacter baumannii AYE]
gi|215484283|ref|YP_002326510.1| lysyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
gi|301345962|ref|ZP_07226703.1| lysyl-tRNA synthetase [Acinetobacter baumannii AB056]
gi|301512378|ref|ZP_07237615.1| lysyl-tRNA synthetase [Acinetobacter baumannii AB058]
gi|301595787|ref|ZP_07240795.1| lysyl-tRNA synthetase [Acinetobacter baumannii AB059]
gi|421651390|ref|ZP_16091759.1| lysine--tRNA ligase [Acinetobacter baumannii OIFC0162]
gi|421658779|ref|ZP_16099010.1| lysine--tRNA ligase [Acinetobacter baumannii Naval-83]
gi|421669767|ref|ZP_16109780.1| lysine--tRNA ligase [Acinetobacter baumannii OIFC099]
gi|421796066|ref|ZP_16232135.1| lysine--tRNA ligase [Acinetobacter baumannii Naval-21]
gi|226737088|sp|B7GXW0.1|SYK_ACIB3 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|238688078|sp|B0V9L5.1|SYK_ACIBY RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|238688250|sp|B0VSE0.1|SYK_ACIBS RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|169149732|emb|CAM87623.1| lysyl-tRNA synthetase [Acinetobacter baumannii AYE]
gi|169152705|emb|CAP01708.1| lysyl-tRNA synthetase [Acinetobacter baumannii]
gi|213987992|gb|ACJ58291.1| lysyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
gi|408508000|gb|EKK09687.1| lysine--tRNA ligase [Acinetobacter baumannii OIFC0162]
gi|408709475|gb|EKL54721.1| lysine--tRNA ligase [Acinetobacter baumannii Naval-83]
gi|410387236|gb|EKP39692.1| lysine--tRNA ligase [Acinetobacter baumannii OIFC099]
gi|410400262|gb|EKP52441.1| lysine--tRNA ligase [Acinetobacter baumannii Naval-21]
Length = 509
Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust.
Identities = 221/446 (49%), Positives = 316/446 (70%), Gaps = 26/446 (5%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G++ SF+++QD +G +IQLY+ + + K+ K D+GDII A+G +
Sbjct: 76 KVAGRVMLNRGSFMVIQDMTG-----RIQLYVDRKGLPKDTLETIKGLDLGDIIAAEGYI 130
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L + + +L+TKSLRPLP+KF L++ E+KYR RY+DLI+NE TRK F+ R
Sbjct: 131 GRSGKGDLYVHLEGFELLTKSLRPLPDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRA 190
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
++++ IR F+ FMEVETP++H PGGA A+PF THHN+L+M +FLRIAPELYLKRL+
Sbjct: 191 KVVAGIRAFLTNERFMEVETPMMHVIPGGASARPFETHHNALDMPLFLRIAPELYLKRLV 250
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF ++FEIN+NFRNEG+S RHNPEFTMIEFY AY +Y LM TE M++K+ +D +GT
Sbjct: 251 VGGFERVFEINRNFRNEGVSTRHNPEFTMIEFYQAYADYKDLMALTENMLEKLALDILGT 310
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFL----KSELK-KINPKFN 293
T + YQG + F F+K+++ +AI + PQ+ ++ ++ FL + ELK ++ P F
Sbjct: 311 TDVPYQGEVFSFKGPFKKISMFDAILENNPQFTPENVGDREFLAKFVREELKEEVKPGFG 370
Query: 294 QKKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELF 353
K LQ ++FEET ETKL PT+IT YP E SPLAR+ N +N +IT+RFE F
Sbjct: 371 LGK---------LQTIVFEETVETKLRQPTFITEYPAETSPLARR-NDDNPHITDRFEFF 420
Query: 354 IIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCG 413
I G E+ANGFSELNDP +Q+ RF+ Q+ K+ + E + +YD +++ ALEYG+PP +G G
Sbjct: 421 IGGRELANGFSELNDPIDQAERFQAQVAEKDAGDDE-AMHYDAEFVEALEYGLPPTAGEG 479
Query: 414 IGVDRLIMLLTNSKNIRDVILFPHLR 439
IG+DRL+ML ++ +IRDVILFPH+R
Sbjct: 480 IGIDRLVMLFADAPSIRDVILFPHMR 505
>gi|260775419|ref|ZP_05884316.1| lysyl-tRNA synthetase (class II) [Vibrio coralliilyticus ATCC
BAA-450]
gi|260608600|gb|EEX34765.1| lysyl-tRNA synthetase (class II) [Vibrio coralliilyticus ATCC
BAA-450]
Length = 505
Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust.
Identities = 219/443 (49%), Positives = 313/443 (70%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM K F+ +Q+TSG +IQ Y + ++ K L ++ DIGDIIG KG L K+
Sbjct: 73 RVMAKRGPFLAIQETSG-----RIQAYAAKDV-QKELKEKYQGLDIGDIIGVKGALHKSG 126
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + S +L+TK+LRPLP KF L++QE++YR RY+DLI+N+++R+ F R++++S
Sbjct: 127 KGDLYVNMESYELLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNQDSREAFIIRSKLVS 186
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM ++EVETP++H PGGA A+PFITHHN+L++ M+LR+APELYLKRL++GGF
Sbjct: 187 AIRNFMSSKGYLEVETPMMHVIPGGATARPFITHHNALDIDMYLRVAPELYLKRLVVGGF 246
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
+++FEIN+NFRNEG+SPRHNPEFTM+EFY AY++Y LM TE+M+ + MD +G+T +
Sbjct: 247 DRVFEINRNFRNEGLSPRHNPEFTMMEFYQAYSDYKDLMDLTEEMLSTVAMDVLGSTSMP 306
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y ++F + ++++ EAIK Y P++ EI DL N+ + + K ++ +
Sbjct: 307 YGDETVEFGGKYARMSMFEAIKHYNPEHAEIQALTEQDLTNRDKMVAIAKSVHVEVETFW 366
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E +L PT+IT YP +ISPLAR+S+ +N T+RFE FI G
Sbjct: 367 TCGQLLEEI-----FGETAEPQLIQPTFITGYPADISPLARRSD-DNPFFTDRFEFFIGG 420
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND E+Q RFK Q+D K+ + E + YYD DYI ALE+G+PP +G GIG+
Sbjct: 421 REVANGFSELNDAEDQDARFKAQVDAKDAGDDE-AMYYDADYITALEHGLPPTAGQGIGI 479
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL ML TN+ IRDVILFP +R
Sbjct: 480 DRLAMLFTNTHTIRDVILFPAMR 502
>gi|419954781|ref|ZP_14470916.1| lysyl-tRNA ligase [Pseudomonas stutzeri TS44]
gi|387968394|gb|EIK52684.1| lysyl-tRNA ligase [Pseudomonas stutzeri TS44]
Length = 500
Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust.
Identities = 218/443 (49%), Positives = 314/443 (70%), Gaps = 17/443 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I +F++LQD SG +IQ+Y+ +++ K++D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGAFMVLQDMSG-----RIQVYVDRKVLPAEQLEAVKHFDLGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L + ++S++L+TKSLRPLP+KF L++ E +YR RY+DLI+N+ R+ F+ R+
Sbjct: 124 ARSGKGDLYVYMNSVRLLTKSLRPLPDKFHGLTDTEQRYRQRYVDLIMNDEVRETFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ + DF+EVETP+L PGGA AKPF THHN+L+M MFLRIAPELYLKRL+
Sbjct: 184 QVIAHIRQFLRERDFLEVETPMLQTIPGGAAAKPFETHHNALDMPMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF ++FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 244 VGGFERVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQAVLGS 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ + DL + E + K K+L
Sbjct: 304 TDVPYGDKVFHFGEPFARLSVFDSILKYNPEISADDLND-----VEKARAIAKQAGAKLL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
+ LQ+M+FEE E KL P +IT YP E+SPLAR+ N +N N+T+RFELFI G E
Sbjct: 359 GHEGLGKLQVMIFEELVEHKLEQPHFITEYPFEVSPLARR-NDQNPNVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + ++D D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFHAQVADKDAGDDE-AMHFDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLRNE 441
L+MLLTNS +IRDVILFPH+R E
Sbjct: 477 LVMLLTNSPSIRDVILFPHMRPE 499
>gi|385792096|ref|YP_005825072.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|328676242|gb|AEB27112.1| Lysyl-tRNA synthetase (class II) [Francisella cf. novicida Fx1]
Length = 560
Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust.
Identities = 222/442 (50%), Positives = 314/442 (71%), Gaps = 13/442 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNY-DIGDIIGAKGTLF 59
+L+RVMGK SFI LQD +G +IQ+Y+ + Y FKN D+GDI+G GT+F
Sbjct: 131 VLRRVMGKASFITLQDYTG-----RIQVYLKKSDLPDGQYETFKNLCDLGDIVGITGTMF 185
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KTNTGELS++ + +++TK++RPLP+KF L++QE++YR RY+DLI NE R+VFK R++
Sbjct: 186 KTNTGELSVEANHFEILTKAIRPLPDKFHGLADQEMRYRQRYVDLITNEKAREVFKVRSK 245
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
++S IR++ ++ DFMEVETP++H GGA AKPF THHN+L+M ++LRIAPELYLKRL++
Sbjct: 246 VVSFIRNYFDRLDFMEVETPMMHVLQGGAAAKPFKTHHNALDMPLYLRIAPELYLKRLVV 305
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF +++EIN+NFRNEG+S RHNPEFTM+EFY AY +Y LM TE M+ K++ + IG+
Sbjct: 306 GGFERVYEINRNFRNEGVSSRHNPEFTMLEFYMAYADYNDLMDLTEDMLSKLVQEVIGSE 365
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++Y ++F +E+++++++I KY + DL K +K+ K L
Sbjct: 366 ILEYGEYKINFGGKYERISMVDSIVKYNDDITKEDLVTFESAKKIAEKLKIKVEAYHELG 425
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+L +I FEET E +L PT+IT+YP +SPLAR+ + N T+RFE FI E+
Sbjct: 426 HLINEI-----FEETVEHQLIQPTFITDYPAVVSPLARRQD-GNPEFTDRFEFFIGAREV 479
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
ANGFSELND E+Q+ RF+ Q++ + E + YD DYI ALEYGMPP +G GIG+DRL
Sbjct: 480 ANGFSELNDAEDQAERFRKQVEAAASGDDE-AMPYDKDYIRALEYGMPPTAGQGIGIDRL 538
Query: 420 IMLLTNSKNIRDVILFPHLRNE 441
+M LTNS++IRDVILFPH++ E
Sbjct: 539 VMYLTNSQSIRDVILFPHMKPE 560
>gi|146308389|ref|YP_001188854.1| lysyl-tRNA synthetase [Pseudomonas mendocina ymp]
gi|166229818|sp|A4XXQ6.1|SYK_PSEMY RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|145576590|gb|ABP86122.1| lysyl-tRNA synthetase [Pseudomonas mendocina ymp]
Length = 505
Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust.
Identities = 218/441 (49%), Positives = 312/441 (70%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
++ G+I +F++LQDTSG ++Q+Y+ + + K +D+GDII A+GTL
Sbjct: 74 KIAGRIMLNRGAFMVLQDTSG-----RLQVYVDRKGLPAETLEAIKTWDLGDIIAAEGTL 128
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L + ++S++L+TKSLRPLP+K L++ E +YR RY+DLI+NE TR F+ R+
Sbjct: 129 ARSGKGDLYVNMTSVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEETRHTFRVRS 188
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ + F+EVETP+L PGGA AKPF THHN+L+M+MFLRIAPELYLKRL+
Sbjct: 189 QVIAHIRRFLNERGFLEVETPMLQTIPGGAAAKPFETHHNALDMQMFLRIAPELYLKRLV 248
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ + +GT
Sbjct: 249 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYRDNMDLTEELFRELALAVLGT 308
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P E DL + ++ KK K+L
Sbjct: 309 TDVPYGDKVFHFGEPFVRLSVYDSILKYNPDITEADLNDVDKARAIAKKAG-----AKVL 363
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
+ LQ+M+FEE E+KL P +IT YP E+SPLAR+ N +N +T+RFELFI G E
Sbjct: 364 GHEGLGKLQVMIFEELVESKLEQPHFITEYPFEVSPLARR-NDQNPAVTDRFELFIGGRE 422
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + ++D D++ ALEYGMPP +G GIG+DR
Sbjct: 423 IANAYSELNDAEDQAERFHAQVAEKDAGDDE-AMHFDADFVRALEYGMPPTAGEGIGIDR 481
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 482 LVMLLTNSPSIRDVILFPHMR 502
>gi|269964523|ref|ZP_06178763.1| lysyl-tRNA synthetase [Vibrio alginolyticus 40B]
gi|269830760|gb|EEZ84979.1| lysyl-tRNA synthetase [Vibrio alginolyticus 40B]
Length = 505
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/443 (49%), Positives = 314/443 (70%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
R+M K F+++Q+TSG +IQ Y +++ + K L ++ DIGDIIG KG L K+
Sbjct: 73 RIMAKRGPFLVIQETSG-----RIQAY-ADKAVQKVLKEKYQGLDIGDIIGVKGALHKSG 126
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE++YR RY+DLI+NE++R+ F R++++S
Sbjct: 127 KGDLYVNMEEYELLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSRQAFVVRSKVMS 186
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM FMEVETP++H PGGA A+PFITHHN+L+M M+LRIAPELYLKRL++GGF
Sbjct: 187 AIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPMYLRIAPELYLKRLVVGGF 246
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
+++FEIN+NFRNEG+SPRHNPEFTM+EFY AY +Y LM TE+++ + + +G+T +
Sbjct: 247 DRVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVAQEVLGSTSMP 306
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y ++F ++ ++++ EAIK Y P + +I DLQN+ + S K ++ +
Sbjct: 307 YGDETVEFGGTYTRMSMFEAIKHYNPDHAQIQALTEEDLQNRDLMVSIAKSVHVEVEPFW 366
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E KL PT+IT YP +ISPLAR+S+ +N T+RFE FI G
Sbjct: 367 TCGQLLEEI-----FGETAEPKLMQPTFITGYPADISPLARRSD-DNPFFTDRFEFFIGG 420
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND E+Q RFK Q++ K + E + +YD DYI ALE+G+PP +G GIG+
Sbjct: 421 REVANGFSELNDAEDQDARFKAQVEAKESGDDE-AMFYDADYITALEHGLPPTAGQGIGI 479
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL+MLLTN+ IRDVILFP +R
Sbjct: 480 DRLVMLLTNTHTIRDVILFPAMR 502
>gi|444427723|ref|ZP_21223094.1| lysyl-tRNA ligase [Vibrio campbellii CAIM 519 = NBRC 15631]
gi|444239021|gb|ELU50601.1| lysyl-tRNA ligase [Vibrio campbellii CAIM 519 = NBRC 15631]
Length = 510
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 219/443 (49%), Positives = 315/443 (71%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
R+M K F+++Q+TSG +IQ Y +++ + K L ++ DIGDIIG KG L K+
Sbjct: 78 RIMAKRGPFLVIQETSG-----RIQAY-ADKAVQKVLKEKYQGLDIGDIIGVKGALHKSG 131
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE++YR RY+DLI+NE++R+ F R++++S
Sbjct: 132 KGDLYVNMEEFELLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSRQAFVVRSKVMS 191
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM FMEVETP++H PGGA A+PFITHHN+L+M M+LRIAPELYLKRL++GGF
Sbjct: 192 AIRNFMITKQFMEVETPMMHVIPGGASARPFITHHNALDMPMYLRIAPELYLKRLVVGGF 251
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
+++FEIN+NFRNEG+SPRHNPEFTM+EFY AY +Y LM TE+++ + ++ +G+T +
Sbjct: 252 DRVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLGSTSMP 311
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y ++F ++ ++++ EAIK Y P + +I D+QN+ + S K ++ +
Sbjct: 312 YGDDTVEFGGTYTRMSMFEAIKHYNPDHAQIQALTEEDIQNRDLMVSIAKSVHVEVEPFW 371
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E KL PT+IT YP +ISPLAR+S+ +N T+RFE FI G
Sbjct: 372 TCGQLLEEI-----FGETAEPKLMQPTFITGYPADISPLARRSD-DNPFFTDRFEFFIGG 425
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND E+Q RFK Q++ K + E + +YD DYI ALE+G+PP +G GIG+
Sbjct: 426 REVANGFSELNDAEDQDARFKAQVEAKESGDDE-AMFYDADYITALEHGLPPTAGQGIGI 484
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL+MLLTN+ IRDVILFP +R
Sbjct: 485 DRLVMLLTNTHTIRDVILFPAMR 507
>gi|262279901|ref|ZP_06057686.1| lysyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
gi|262260252|gb|EEY78985.1| lysyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
Length = 509
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/442 (50%), Positives = 316/442 (71%), Gaps = 22/442 (4%)
Query: 4 RVM-GKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM + SF+++QD +G +IQLY+ + + K++ K D+GDII A+G + ++
Sbjct: 80 RVMLNRGSFMVIQDMTG-----RIQLYVDRKGLPKDILETIKGLDLGDIIAAEGYIGRSG 134
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TKSLRPLP+KF L++ E+KYR RY+DLI+NE TRK F+ R ++++
Sbjct: 135 KGDLYVHLEGFELLTKSLRPLPDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRAKVVA 194
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
IR F+ FMEVETP++H PGGA A+PF THHN+L+M +FLRIAPELYLKRL++GGF
Sbjct: 195 GIRAFLNNERFMEVETPMMHVIPGGASARPFETHHNALDMPLFLRIAPELYLKRLVVGGF 254
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
++FEIN+NFRNEG+S RHNPEFTMIEFY AY +Y LM TE MI+K+ +D +GTT +
Sbjct: 255 ERVFEINRNFRNEGVSTRHNPEFTMIEFYQAYADYKDLMALTENMIEKLALDILGTTDVP 314
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFL----KSELK-KINPKFNQKKI 297
YQG + F ++K+++ +AI + PQ+ ++ ++ FL + ELK ++ P F K
Sbjct: 315 YQGEVFSFKGPYKKISMFDAILENNPQFTPENVGDREFLAQFIREELKEQVKPGFGLGK- 373
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
LQ ++FEET ETKL PT+IT YP E SPLAR+ N +N ++T+RFE FI G
Sbjct: 374 --------LQTIVFEETVETKLRQPTFITEYPAETSPLARR-NDDNPHVTDRFEFFIGGR 424
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
E+ANGFSELNDP +Q+ RF+ Q+ K+ + E + +YD +++ ALEYG+PP +G GIG+D
Sbjct: 425 ELANGFSELNDPIDQAERFQAQVAEKDAGDDE-AMHYDAEFVEALEYGLPPTAGEGIGID 483
Query: 418 RLIMLLTNSKNIRDVILFPHLR 439
RL+ML ++ +IRDVILFPH+R
Sbjct: 484 RLVMLFADAPSIRDVILFPHMR 505
>gi|213156802|ref|YP_002318463.1| lysyl-tRNA synthetase [Acinetobacter baumannii AB0057]
gi|332853679|ref|ZP_08434909.1| lysine--tRNA ligase [Acinetobacter baumannii 6013150]
gi|332870858|ref|ZP_08439503.1| lysine--tRNA ligase [Acinetobacter baumannii 6013113]
gi|417544284|ref|ZP_12195370.1| lysine--tRNA ligase [Acinetobacter baumannii OIFC032]
gi|417551307|ref|ZP_12202385.1| lysine--tRNA ligase [Acinetobacter baumannii Naval-18]
gi|417554949|ref|ZP_12206018.1| lysine--tRNA ligase [Acinetobacter baumannii Naval-81]
gi|417562845|ref|ZP_12213724.1| lysine--tRNA ligase [Acinetobacter baumannii OIFC137]
gi|417565381|ref|ZP_12216255.1| lysine--tRNA ligase [Acinetobacter baumannii OIFC143]
gi|417574674|ref|ZP_12225528.1| lysine--tRNA ligase [Acinetobacter baumannii Canada BC-5]
gi|421201315|ref|ZP_15658474.1| lysine--tRNA ligase [Acinetobacter baumannii OIFC109]
gi|421456377|ref|ZP_15905719.1| lysine--tRNA ligase [Acinetobacter baumannii IS-123]
gi|421620508|ref|ZP_16061440.1| lysine--tRNA ligase [Acinetobacter baumannii OIFC074]
gi|421625396|ref|ZP_16066249.1| lysine--tRNA ligase [Acinetobacter baumannii OIFC098]
gi|421635543|ref|ZP_16076145.1| lysine--tRNA ligase [Acinetobacter baumannii Naval-13]
gi|421643435|ref|ZP_16083929.1| lysine--tRNA ligase [Acinetobacter baumannii IS-235]
gi|421646180|ref|ZP_16086632.1| lysine--tRNA ligase [Acinetobacter baumannii IS-251]
gi|421656508|ref|ZP_16096813.1| lysine--tRNA ligase [Acinetobacter baumannii Naval-72]
gi|421666887|ref|ZP_16106969.1| lysine--tRNA ligase [Acinetobacter baumannii OIFC087]
gi|421700148|ref|ZP_16139665.1| lysine--tRNA ligase [Acinetobacter baumannii IS-58]
gi|421801718|ref|ZP_16237675.1| lysine--tRNA ligase [Acinetobacter baumannii Canada BC1]
gi|421805069|ref|ZP_16240963.1| lysine--tRNA ligase [Acinetobacter baumannii WC-A-694]
gi|421807584|ref|ZP_16243444.1| lysine--tRNA ligase [Acinetobacter baumannii OIFC035]
gi|425747804|ref|ZP_18865802.1| lysine--tRNA ligase [Acinetobacter baumannii WC-348]
gi|445456404|ref|ZP_21445850.1| lysine--tRNA ligase [Acinetobacter baumannii OIFC047]
gi|445491431|ref|ZP_21459746.1| lysine--tRNA ligase [Acinetobacter baumannii AA-014]
gi|213055962|gb|ACJ40864.1| lysyl-tRNA synthetase [Acinetobacter baumannii AB0057]
gi|332728503|gb|EGJ59877.1| lysine--tRNA ligase [Acinetobacter baumannii 6013150]
gi|332731959|gb|EGJ63237.1| lysine--tRNA ligase [Acinetobacter baumannii 6013113]
gi|395525427|gb|EJG13516.1| lysine--tRNA ligase [Acinetobacter baumannii OIFC137]
gi|395557137|gb|EJG23138.1| lysine--tRNA ligase [Acinetobacter baumannii OIFC143]
gi|395563347|gb|EJG25000.1| lysine--tRNA ligase [Acinetobacter baumannii OIFC109]
gi|400210242|gb|EJO41212.1| lysine--tRNA ligase [Acinetobacter baumannii Canada BC-5]
gi|400210805|gb|EJO41769.1| lysine--tRNA ligase [Acinetobacter baumannii IS-123]
gi|400382172|gb|EJP40850.1| lysine--tRNA ligase [Acinetobacter baumannii OIFC032]
gi|400385762|gb|EJP48837.1| lysine--tRNA ligase [Acinetobacter baumannii Naval-18]
gi|400391366|gb|EJP58413.1| lysine--tRNA ligase [Acinetobacter baumannii Naval-81]
gi|404570530|gb|EKA75603.1| lysine--tRNA ligase [Acinetobacter baumannii IS-58]
gi|408504835|gb|EKK06565.1| lysine--tRNA ligase [Acinetobacter baumannii Naval-72]
gi|408508118|gb|EKK09804.1| lysine--tRNA ligase [Acinetobacter baumannii IS-235]
gi|408517567|gb|EKK19105.1| lysine--tRNA ligase [Acinetobacter baumannii IS-251]
gi|408699065|gb|EKL44550.1| lysine--tRNA ligase [Acinetobacter baumannii OIFC098]
gi|408700195|gb|EKL45658.1| lysine--tRNA ligase [Acinetobacter baumannii OIFC074]
gi|408702362|gb|EKL47775.1| lysine--tRNA ligase [Acinetobacter baumannii Naval-13]
gi|410386359|gb|EKP38830.1| lysine--tRNA ligase [Acinetobacter baumannii OIFC087]
gi|410404975|gb|EKP57028.1| lysine--tRNA ligase [Acinetobacter baumannii Canada BC1]
gi|410410119|gb|EKP62039.1| lysine--tRNA ligase [Acinetobacter baumannii WC-A-694]
gi|410416565|gb|EKP68337.1| lysine--tRNA ligase [Acinetobacter baumannii OIFC035]
gi|425492843|gb|EKU59095.1| lysine--tRNA ligase [Acinetobacter baumannii WC-348]
gi|444764565|gb|ELW88878.1| lysine--tRNA ligase [Acinetobacter baumannii AA-014]
gi|444778350|gb|ELX02368.1| lysine--tRNA ligase [Acinetobacter baumannii OIFC047]
Length = 520
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/446 (49%), Positives = 316/446 (70%), Gaps = 26/446 (5%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G++ SF+++QD +G +IQLY+ + + K+ K D+GDII A+G +
Sbjct: 87 KVAGRVMLNRGSFMVIQDMTG-----RIQLYVDRKGLPKDTLETIKGLDLGDIIAAEGYI 141
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L + + +L+TKSLRPLP+KF L++ E+KYR RY+DLI+NE TRK F+ R
Sbjct: 142 GRSGKGDLYVHLEGFELLTKSLRPLPDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRA 201
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
++++ IR F+ FMEVETP++H PGGA A+PF THHN+L+M +FLRIAPELYLKRL+
Sbjct: 202 KVVAGIRAFLTNERFMEVETPMMHVIPGGASARPFETHHNALDMPLFLRIAPELYLKRLV 261
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF ++FEIN+NFRNEG+S RHNPEFTMIEFY AY +Y LM TE M++K+ +D +GT
Sbjct: 262 VGGFERVFEINRNFRNEGVSTRHNPEFTMIEFYQAYADYKDLMALTENMLEKLALDILGT 321
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFL----KSELK-KINPKFN 293
T + YQG + F F+K+++ +AI + PQ+ ++ ++ FL + ELK ++ P F
Sbjct: 322 TDVPYQGEVFSFKGPFKKISMFDAILENNPQFTPENVGDREFLAKFVREELKEEVKPGFG 381
Query: 294 QKKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELF 353
K LQ ++FEET ETKL PT+IT YP E SPLAR+ N +N +IT+RFE F
Sbjct: 382 LGK---------LQTIVFEETVETKLRQPTFITEYPAETSPLARR-NDDNPHITDRFEFF 431
Query: 354 IIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCG 413
I G E+ANGFSELNDP +Q+ RF+ Q+ K+ + E + +YD +++ ALEYG+PP +G G
Sbjct: 432 IGGRELANGFSELNDPIDQAERFQAQVAEKDAGDDE-AMHYDAEFVEALEYGLPPTAGEG 490
Query: 414 IGVDRLIMLLTNSKNIRDVILFPHLR 439
IG+DRL+ML ++ +IRDVILFPH+R
Sbjct: 491 IGIDRLVMLFADAPSIRDVILFPHMR 516
>gi|398838994|ref|ZP_10596245.1| lysyl-tRNA synthetase (class II) [Pseudomonas sp. GM102]
gi|398113876|gb|EJM03716.1| lysyl-tRNA synthetase (class II) [Pseudomonas sp. GM102]
Length = 500
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/441 (49%), Positives = 314/441 (71%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + ++ K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLSEDTLAAVKTWDMGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L ++++S++L+TKSLRPLP+K L++ E +YR RY+DLI+NE R+ F+ R+
Sbjct: 124 ARSGKGDLYVEMTSVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEEVRQTFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ K DF+EVETP+L PGGA AKPF THHN+L+M+MFLRIAPELYLKRL+
Sbjct: 184 QVIAHIRSFLMKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGS 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DL + ++ KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTADDLNDIDKARTIAKKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+ N EN N+T+RFELFI G E
Sbjct: 359 GFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDENPNVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFMAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 477 LVMLLTNSPSIRDVILFPHMR 497
>gi|421675117|ref|ZP_16115043.1| lysine--tRNA ligase [Acinetobacter baumannii OIFC065]
gi|421690823|ref|ZP_16130489.1| lysine--tRNA ligase [Acinetobacter baumannii IS-116]
gi|404563720|gb|EKA68920.1| lysine--tRNA ligase [Acinetobacter baumannii IS-116]
gi|410383132|gb|EKP35666.1| lysine--tRNA ligase [Acinetobacter baumannii OIFC065]
Length = 509
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/446 (49%), Positives = 316/446 (70%), Gaps = 26/446 (5%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G++ SF+++QD +G +IQLY+ + + K+ K D+GDII A+G +
Sbjct: 76 KVAGRVMLNRGSFMVIQDMTG-----RIQLYVDRKGLPKDTLETIKGLDLGDIIAAEGYI 130
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L + + +L+TKSLRPLP+KF L++ E+KYR RY+DLI+NE TRK F+ R
Sbjct: 131 GRSGKGDLYVHLEGFELLTKSLRPLPDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRA 190
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
++++ IR F+ FMEVETP++H PGGA A+PF THHN+L+M +FLRIAPELYLKRL+
Sbjct: 191 KVVAGIRTFLTNERFMEVETPMMHVIPGGASARPFETHHNALDMPLFLRIAPELYLKRLV 250
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF ++FEIN+NFRNEG+S RHNPEFTMIEFY AY +Y LM TE M++K+ +D +GT
Sbjct: 251 VGGFERVFEINRNFRNEGVSTRHNPEFTMIEFYQAYADYKDLMALTENMLEKLALDILGT 310
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFL----KSELK-KINPKFN 293
T + YQG + F F+K+++ +AI + PQ+ ++ ++ FL + ELK ++ P F
Sbjct: 311 TDVPYQGEVFSFKGPFKKISMFDAILENNPQFTPENVGDREFLAKFVREELKEEVKPGFG 370
Query: 294 QKKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELF 353
K LQ ++FEET ETKL PT+IT YP E SPLAR+ N +N +IT+RFE F
Sbjct: 371 LGK---------LQTIVFEETVETKLRQPTFITEYPAETSPLARR-NDDNPHITDRFEFF 420
Query: 354 IIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCG 413
I G E+ANGFSELNDP +Q+ RF+ Q+ K+ + E + +YD +++ ALEYG+PP +G G
Sbjct: 421 IGGRELANGFSELNDPIDQAERFQAQVAEKDAGDDE-AMHYDAEFVEALEYGLPPTAGEG 479
Query: 414 IGVDRLIMLLTNSKNIRDVILFPHLR 439
IG+DRL+ML ++ +IRDVILFPH+R
Sbjct: 480 IGIDRLVMLFADAPSIRDVILFPHMR 505
>gi|421143736|ref|ZP_15603671.1| lysyl-tRNA synthetase [Pseudomonas fluorescens BBc6R8]
gi|404505096|gb|EKA19131.1| lysyl-tRNA synthetase [Pseudomonas fluorescens BBc6R8]
Length = 500
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/441 (49%), Positives = 313/441 (70%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + + K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLSEETLASVKTWDMGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L ++++S++L+TKSLRPLP+K L++ E +YR RY+DLI+NE R+ F+ R+
Sbjct: 124 ARSGKGDLYVEMTSVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEEVRQTFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ K DF+EVETP+L PGGA AKPF THHN+L+M+MFLRIAPELYLKRL+
Sbjct: 184 QVIAHIRSFLMKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +GT
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGT 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DL + ++ KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTADDLNDIDKARAIAKKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+ N +N N+T+RFELFI G E
Sbjct: 359 GFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDDNPNVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFMAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 477 LVMLLTNSPSIRDVILFPHMR 497
>gi|254373628|ref|ZP_04989112.1| lysine-tRNA ligase [Francisella novicida GA99-3548]
gi|151571350|gb|EDN37004.1| lysine-tRNA ligase [Francisella novicida GA99-3548]
Length = 576
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 222/442 (50%), Positives = 313/442 (70%), Gaps = 13/442 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNY-DIGDIIGAKGTLF 59
+L+RVMGK SFI LQD +G +IQ+Y+ + Y FKN D+GDI+G GT+F
Sbjct: 147 VLRRVMGKASFITLQDYTG-----RIQVYLKKSDLPDGQYETFKNLCDLGDIVGITGTMF 201
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KTNTGELS++ + +++TK++RPLP+KF L++QE++YR RY+DLI NE R VFK R++
Sbjct: 202 KTNTGELSVEANHFEILTKAIRPLPDKFHGLADQEMRYRQRYVDLITNEKARGVFKVRSK 261
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
++S IR++ ++ DFMEVETP++H GGA AKPF THHN+L+M ++LRIAPELYLKRL++
Sbjct: 262 VVSFIRNYFDRLDFMEVETPMMHVLQGGAAAKPFKTHHNALDMPLYLRIAPELYLKRLVV 321
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF +++EIN+NFRNEG+S RHNPEFTM+EFY AY +Y LM TE M+ K++ + IG+
Sbjct: 322 GGFERVYEINRNFRNEGVSSRHNPEFTMLEFYMAYADYNDLMDLTEDMLSKLVQEVIGSE 381
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++Y ++F +E+++++++I KY + DL K +K+ K L
Sbjct: 382 ILEYGEYKINFGGKYERISMVDSIVKYNDDITKEDLVTFESAKKIAEKLKIKVEAYHELG 441
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+L +I FEET E +L PT+IT+YP +SPLAR+ + N T+RFE FI E+
Sbjct: 442 HLINEI-----FEETVEHQLIQPTFITDYPAVVSPLARRQD-GNPEFTDRFEFFIGAREV 495
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
ANGFSELND E+Q+ RF+ Q++ + E + YD DYI ALEYGMPP +G GIG+DRL
Sbjct: 496 ANGFSELNDAEDQAERFRKQVEAAASGDDE-AMPYDKDYIRALEYGMPPTAGQGIGIDRL 554
Query: 420 IMLLTNSKNIRDVILFPHLRNE 441
+M LTNS++IRDVILFPH++ E
Sbjct: 555 VMYLTNSQSIRDVILFPHMKPE 576
>gi|424921618|ref|ZP_18344979.1| Lysyl-tRNA synthetase [Pseudomonas fluorescens R124]
gi|404302778|gb|EJZ56740.1| Lysyl-tRNA synthetase [Pseudomonas fluorescens R124]
Length = 500
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 219/441 (49%), Positives = 315/441 (71%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + ++ K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLSEDTLAAVKTWDMGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L +++++++L+TKSLRPLP+K L++ E +YR RY+DLI+NE+ R+ F+ R+
Sbjct: 124 ARSGKGDLYVEMTNVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEDVRQTFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ K DF+EVETP+L PGGA AKPF THHN+L+M+MFLRIAPELYLKRL+
Sbjct: 184 QVIAHIRSFLMKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGS 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DL + ++ KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFARLSVFDSILKYNPELTADDLNDIDKARAIAKKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+ N EN N+T+RFELFI G E
Sbjct: 359 GFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDENPNVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFMAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 477 LVMLLTNSPSIRDVILFPHMR 497
>gi|387124817|ref|YP_006290699.1| lysyl-tRNA synthetase [Acinetobacter baumannii MDR-TJ]
gi|407931976|ref|YP_006847619.1| lysyl-tRNA synthetase [Acinetobacter baumannii TYTH-1]
gi|417570763|ref|ZP_12221620.1| lysine--tRNA ligase [Acinetobacter baumannii OIFC189]
gi|417869288|ref|ZP_12514280.1| lysyl-tRNA synthetase [Acinetobacter baumannii ABNIH1]
gi|417872676|ref|ZP_12517571.1| lysyl-tRNA synthetase [Acinetobacter baumannii ABNIH2]
gi|417877097|ref|ZP_12521832.1| lysyl-tRNA synthetase [Acinetobacter baumannii ABNIH3]
gi|417883223|ref|ZP_12527478.1| lysyl-tRNA synthetase [Acinetobacter baumannii ABNIH4]
gi|421202398|ref|ZP_15659549.1| lysyl-tRNA synthetase [Acinetobacter baumannii AC12]
gi|421535497|ref|ZP_15981756.1| lysyl-tRNA synthetase [Acinetobacter baumannii AC30]
gi|421702800|ref|ZP_16142276.1| lysyl-tRNA ligase [Acinetobacter baumannii ZWS1122]
gi|421706550|ref|ZP_16145963.1| lysyl-tRNA ligase [Acinetobacter baumannii ZWS1219]
gi|421786385|ref|ZP_16222788.1| lysine--tRNA ligase [Acinetobacter baumannii Naval-82]
gi|421792556|ref|ZP_16228709.1| lysine--tRNA ligase [Acinetobacter baumannii Naval-2]
gi|424053279|ref|ZP_17790811.1| lysyl-tRNA synthetase [Acinetobacter baumannii Ab11111]
gi|424063060|ref|ZP_17800545.1| lysyl-tRNA synthetase [Acinetobacter baumannii Ab44444]
gi|425752599|ref|ZP_18870506.1| lysine--tRNA ligase [Acinetobacter baumannii Naval-113]
gi|445454509|ref|ZP_21445431.1| lysine--tRNA ligase [Acinetobacter baumannii WC-A-92]
gi|445466430|ref|ZP_21450409.1| lysine--tRNA ligase [Acinetobacter baumannii OIFC338]
gi|238685500|sp|A3M3D6.2|SYK_ACIBT RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|193076724|gb|ABO11430.2| lysyl-tRNA-synthase [Acinetobacter baumannii ATCC 17978]
gi|342231059|gb|EGT95878.1| lysyl-tRNA synthetase [Acinetobacter baumannii ABNIH1]
gi|342233312|gb|EGT98051.1| lysyl-tRNA synthetase [Acinetobacter baumannii ABNIH2]
gi|342236223|gb|EGU00763.1| lysyl-tRNA synthetase [Acinetobacter baumannii ABNIH4]
gi|342236457|gb|EGU00979.1| lysyl-tRNA synthetase [Acinetobacter baumannii ABNIH3]
gi|385879309|gb|AFI96404.1| lysyl-tRNA synthetase (class II) [Acinetobacter baumannii MDR-TJ]
gi|395551211|gb|EJG17220.1| lysine--tRNA ligase [Acinetobacter baumannii OIFC189]
gi|398328353|gb|EJN44480.1| lysyl-tRNA synthetase [Acinetobacter baumannii AC12]
gi|404669067|gb|EKB36974.1| lysyl-tRNA synthetase [Acinetobacter baumannii Ab11111]
gi|404674887|gb|EKB42618.1| lysyl-tRNA synthetase [Acinetobacter baumannii Ab44444]
gi|407193615|gb|EKE64771.1| lysyl-tRNA ligase [Acinetobacter baumannii ZWS1122]
gi|407193899|gb|EKE65048.1| lysyl-tRNA ligase [Acinetobacter baumannii ZWS1219]
gi|407900557|gb|AFU37388.1| lysyl-tRNA synthetase [Acinetobacter baumannii TYTH-1]
gi|409986339|gb|EKO42533.1| lysyl-tRNA synthetase [Acinetobacter baumannii AC30]
gi|410400136|gb|EKP52316.1| lysine--tRNA ligase [Acinetobacter baumannii Naval-2]
gi|410412863|gb|EKP64711.1| lysine--tRNA ligase [Acinetobacter baumannii Naval-82]
gi|425498830|gb|EKU64896.1| lysine--tRNA ligase [Acinetobacter baumannii Naval-113]
gi|444752507|gb|ELW77191.1| lysine--tRNA ligase [Acinetobacter baumannii WC-A-92]
gi|444778241|gb|ELX02260.1| lysine--tRNA ligase [Acinetobacter baumannii OIFC338]
Length = 509
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/446 (49%), Positives = 316/446 (70%), Gaps = 26/446 (5%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G++ SF+++QD +G +IQLY+ + + K+ K D+GDII A+G +
Sbjct: 76 KVAGRVMLNRGSFMVIQDMTG-----RIQLYVDRKGLPKDTLETIKGLDLGDIIAAEGYI 130
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L + + +L+TKSLRPLP+KF L++ E+KYR RY+DLI+NE TRK F+ R
Sbjct: 131 GRSGKGDLYVHLEGFELLTKSLRPLPDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRA 190
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
++++ IR F+ FMEVETP++H PGGA A+PF THHN+L+M +FLRIAPELYLKRL+
Sbjct: 191 KVVAGIRAFLTNERFMEVETPMMHVIPGGASARPFETHHNALDMPLFLRIAPELYLKRLV 250
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF ++FEIN+NFRNEG+S RHNPEFTMIEFY AY +Y LM TE M++K+ +D +GT
Sbjct: 251 VGGFERVFEINRNFRNEGVSTRHNPEFTMIEFYQAYADYKDLMALTENMLEKLAIDILGT 310
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFL----KSELK-KINPKFN 293
T + YQG + F F+K+++ +AI + PQ+ ++ ++ FL + ELK ++ P F
Sbjct: 311 TDVPYQGEVFSFKGPFKKISMFDAILENNPQFTPENVGDREFLAKFVREELKEEVKPGFG 370
Query: 294 QKKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELF 353
K LQ ++FEET ETKL PT+IT YP E SPLAR+ N +N +IT+RFE F
Sbjct: 371 LGK---------LQTIVFEETVETKLRQPTFITEYPAETSPLARR-NDDNPHITDRFEFF 420
Query: 354 IIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCG 413
I G E+ANGFSELNDP +Q+ RF+ Q+ K+ + E + +YD +++ ALEYG+PP +G G
Sbjct: 421 IGGRELANGFSELNDPIDQAERFQAQVAEKDAGDDE-AMHYDAEFVEALEYGLPPTAGEG 479
Query: 414 IGVDRLIMLLTNSKNIRDVILFPHLR 439
IG+DRL+ML ++ +IRDVILFPH+R
Sbjct: 480 IGIDRLVMLFADAPSIRDVILFPHMR 505
>gi|343492186|ref|ZP_08730559.1| lysyl-tRNA synthetase [Vibrio nigripulchritudo ATCC 27043]
gi|342827526|gb|EGU61914.1| lysyl-tRNA synthetase [Vibrio nigripulchritudo ATCC 27043]
Length = 510
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 218/443 (49%), Positives = 314/443 (70%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
R+M K F+++Q+TSG +IQ Y + ++ K L ++ DIGDIIG KG L K+
Sbjct: 78 RIMAKRGPFLVIQETSG-----RIQAYAAKDV-QKELKAKYQGLDIGDIIGVKGALHKSG 131
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE++YR RY+DLI+NE++R+ F R++++S
Sbjct: 132 KGDLYVNMEEYELLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSRQAFIIRSKLVS 191
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
SIR+FM ++EVETP++H PGGA A+PFITHHN+L++ M+LR+APELYLKRL++GGF
Sbjct: 192 SIRNFMSGKGYLEVETPMMHVIPGGATARPFITHHNALDIDMYLRVAPELYLKRLVVGGF 251
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
+++FEIN+NFRNEG+SPRHNPEFTM+EFY AY++Y LM TE+M+ + +D +G+T +
Sbjct: 252 DRVFEINRNFRNEGLSPRHNPEFTMMEFYQAYSDYKDLMDLTEEMLSTVALDVLGSTSMP 311
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYN------EIDLQNKLFLKSELKKINPKFNQKK 296
Y ++F + ++++ EAIK Y P+++ E DLQ++ + S K ++ + +
Sbjct: 312 YGDETVEFGGKYARMSMFEAIKHYNPEHDAIQKLTEADLQDRDLMVSIAKSVHVEVEEFW 371
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E KL PT+IT YP +ISPLAR+S+ N T+RFE FI G
Sbjct: 372 TCGQLLEEI-----FGETAEPKLIQPTFITGYPADISPLARRSD-GNPFFTDRFEFFIGG 425
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND E+Q RFK Q++ K+ + E + YYD DYI ALE+G+PP +G GIG+
Sbjct: 426 REVANGFSELNDAEDQDARFKAQVEAKDAGDDE-AMYYDEDYITALEHGLPPTAGQGIGI 484
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL ML TN+ IRDVILFP +R
Sbjct: 485 DRLAMLFTNTHTIRDVILFPAMR 507
>gi|269959606|ref|ZP_06173987.1| lysyl-tRNA synthetase [Vibrio harveyi 1DA3]
gi|424047876|ref|ZP_17785432.1| lysine--tRNA ligase [Vibrio cholerae HENC-03]
gi|269835664|gb|EEZ89742.1| lysyl-tRNA synthetase [Vibrio harveyi 1DA3]
gi|408883186|gb|EKM21973.1| lysine--tRNA ligase [Vibrio cholerae HENC-03]
Length = 510
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 219/443 (49%), Positives = 315/443 (71%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
R+M K F+++Q+TSG +IQ Y +++ + K L ++ DIGDIIG KG L K+
Sbjct: 78 RIMAKRGPFLVIQETSG-----RIQAY-ADKAVQKVLKDQYQGLDIGDIIGVKGALHKSG 131
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE++YR RY+DLI+NE++R+ F R++++S
Sbjct: 132 KGDLYVNMEEYELLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSRQAFVVRSKVMS 191
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM FMEVETP++H PGGA A+PFITHHN+L+M M+LRIAPELYLKRL++GGF
Sbjct: 192 AIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPMYLRIAPELYLKRLVVGGF 251
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
+++FEIN+NFRNEG+SPRHNPEFTM+EFY AY +Y LM TE+++ + ++ +G+T +
Sbjct: 252 DRVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLGSTSMP 311
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y ++F ++ ++++ EAIK Y P + +I D+QN+ + S K ++ +
Sbjct: 312 YGEDTVEFGGTYTRMSMFEAIKHYNPDHAQIQALTEEDIQNRDLMVSIAKSVHVEVEPFW 371
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E KL PT+IT YP +ISPLAR+S+ +N T+RFE FI G
Sbjct: 372 TCGQLLEEI-----FGETAEPKLMQPTFITGYPADISPLARRSD-DNPFFTDRFEFFIGG 425
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND E+Q RFK Q++ K + E + +YD DYI ALE+G+PP +G GIG+
Sbjct: 426 REVANGFSELNDAEDQDARFKAQVEAKESGDDE-AMFYDADYITALEHGLPPTAGQGIGI 484
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL+MLLTN+ IRDVILFP +R
Sbjct: 485 DRLVMLLTNTHTIRDVILFPAMR 507
>gi|421661411|ref|ZP_16101587.1| lysine--tRNA ligase [Acinetobacter baumannii OIFC110]
gi|421694902|ref|ZP_16134519.1| lysine--tRNA ligase [Acinetobacter baumannii WC-692]
gi|404567137|gb|EKA72265.1| lysine--tRNA ligase [Acinetobacter baumannii WC-692]
gi|408715823|gb|EKL60945.1| lysine--tRNA ligase [Acinetobacter baumannii OIFC110]
Length = 520
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/446 (49%), Positives = 316/446 (70%), Gaps = 26/446 (5%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G++ SF+++QD +G +IQLY+ + + K+ K D+GDII A+G +
Sbjct: 87 KVAGRVMLNRGSFMVIQDMTG-----RIQLYVDRKGLPKDTLETIKGLDLGDIIAAEGYI 141
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L + + +L+TKSLRPLP+KF L++ E+KYR RY+DLI+NE TRK F+ R
Sbjct: 142 GRSGKGDLYVHLEGFELLTKSLRPLPDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRA 201
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
++++ IR F+ FMEVETP++H PGGA A+PF THHN+L+M +FLRIAPELYLKRL+
Sbjct: 202 KVVAGIRAFLTNERFMEVETPMMHVIPGGASARPFETHHNALDMPLFLRIAPELYLKRLV 261
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF ++FEIN+NFRNEG+S RHNPEFTMIEFY AY +Y LM TE M++K+ +D +GT
Sbjct: 262 VGGFERVFEINRNFRNEGVSTRHNPEFTMIEFYQAYADYKDLMALTENMLEKLALDILGT 321
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFL----KSELK-KINPKFN 293
T + YQG + F F+K+++ +AI + PQ+ ++ ++ FL + ELK ++ P F
Sbjct: 322 TDVPYQGEVFSFKGPFKKISMFDAILENNPQFTPENVGDREFLAKFVREELKEEVKPGFG 381
Query: 294 QKKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELF 353
K LQ ++FEET ETKL PT+IT YP E SPLAR+ N +N +IT+RFE F
Sbjct: 382 LGK---------LQTIVFEETVETKLRQPTFITEYPAETSPLARR-NDDNPHITDRFEFF 431
Query: 354 IIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCG 413
I G E+ANGFSELNDP +Q+ RF+ Q+ K+ + E + +YD +++ ALEYG+PP +G G
Sbjct: 432 IGGRELANGFSELNDPIDQAERFQAQVAEKDAGDDE-AMHYDAEFVEALEYGLPPTAGEG 490
Query: 414 IGVDRLIMLLTNSKNIRDVILFPHLR 439
IG+DRL+ML ++ +IRDVILFPH+R
Sbjct: 491 IGIDRLVMLFADAPSIRDVILFPHMR 516
>gi|452954342|gb|EME59746.1| lysyl-tRNA ligase [Acinetobacter baumannii MSP4-16]
Length = 509
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/446 (49%), Positives = 316/446 (70%), Gaps = 26/446 (5%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G++ SF+++QD +G +IQLY+ + + K+ K D+GDII A+G +
Sbjct: 76 KVAGRVMLNRGSFMVIQDMTG-----RIQLYVDRKGLPKDTLETIKGLDLGDIIAAEGYI 130
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L + + +L+TKSLRPLP+KF L++ E+KYR RY+DLI+NE TRK F+ R
Sbjct: 131 GRSGKGDLYVHLEGFELLTKSLRPLPDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRA 190
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
++++ IR F+ FMEVETP++H PGGA A+PF THHN+L+M +FLRIAPELYLKRL+
Sbjct: 191 KVVAGIRAFLTNERFMEVETPMMHVIPGGASARPFETHHNALDMPLFLRIAPELYLKRLV 250
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF ++FEIN+NFRNEG+S RHNPEFTMIEFY AY +Y LM TE M++K+ +D +GT
Sbjct: 251 VGGFERVFEINRNFRNEGVSTRHNPEFTMIEFYQAYADYKDLMALTENMLEKLAIDILGT 310
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFL----KSELK-KINPKFN 293
T + YQG + F F+K+++ +AI + PQ+ ++ ++ FL + ELK ++ P F
Sbjct: 311 TDVPYQGEVFSFKGPFKKISMFDAILENNPQFTPENVGDREFLAKFIREELKEEVKPGFG 370
Query: 294 QKKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELF 353
K LQ ++FEET ETKL PT+IT YP E SPLAR+ N +N +IT+RFE F
Sbjct: 371 LGK---------LQTIVFEETVETKLRQPTFITEYPAETSPLARR-NDDNPHITDRFEFF 420
Query: 354 IIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCG 413
I G E+ANGFSELNDP +Q+ RF+ Q+ K+ + E + +YD +++ ALEYG+PP +G G
Sbjct: 421 IGGRELANGFSELNDPIDQAERFQAQVAEKDAGDDE-AMHYDAEFVEALEYGLPPTAGEG 479
Query: 414 IGVDRLIMLLTNSKNIRDVILFPHLR 439
IG+DRL+ML ++ +IRDVILFPH+R
Sbjct: 480 IGIDRLVMLFADAPSIRDVILFPHMR 505
>gi|330807739|ref|YP_004352201.1| lysyl-tRNA synthetase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|423695525|ref|ZP_17670015.1| lysine--tRNA ligase [Pseudomonas fluorescens Q8r1-96]
gi|327375847|gb|AEA67197.1| lysyl-tRNA synthetase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|388008865|gb|EIK70116.1| lysine--tRNA ligase [Pseudomonas fluorescens Q8r1-96]
Length = 500
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 217/435 (49%), Positives = 312/435 (71%), Gaps = 12/435 (2%)
Query: 5 VMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTNTG 64
V+ + SF+++QD +G ++Q+Y++ + + + K +D+GDII A+GTL ++ G
Sbjct: 75 VLDRGSFMVIQDMTG-----RLQVYVNRKTLPEETLAAVKTWDLGDIIAAEGTLARSGKG 129
Query: 65 ELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIISSI 124
+L ++++S++L+TKSLRPLP+K L++ E +YR RY+DLI+NE+ R+ F+ R+Q+I+ I
Sbjct: 130 DLYVEMTSVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEDVRQTFRVRSQVIAHI 189
Query: 125 RHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGFNK 184
R F+ K DF+EVETP+L PGGA AKPF THHN+L+M+MFLRIAPELYLKRL++GGF K
Sbjct: 190 RSFLMKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMFLRIAPELYLKRLVVGGFEK 249
Query: 185 IFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKIDYQ 244
+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +GTT + Y
Sbjct: 250 VFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGTTDVPYG 309
Query: 245 GRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNNLKKD 304
++ F + F +L++ ++I KY P+ DL + ++ KK K+L
Sbjct: 310 DKVFHFGEPFVRLSVFDSILKYNPELTADDLNDIEKARAIAKKAG-----AKVLGFEGLG 364
Query: 305 ILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIANGFS 364
LQ+M+FEE E KL P +IT YP E+SPLAR+ N EN ++T+RFELFI G EIAN +S
Sbjct: 365 KLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDENPSVTDRFELFIGGREIANAYS 423
Query: 365 ELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLIMLLT 424
ELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DRL+MLLT
Sbjct: 424 ELNDAEDQAERFMAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDRLVMLLT 482
Query: 425 NSKNIRDVILFPHLR 439
NS +IRDVILFPH+R
Sbjct: 483 NSPSIRDVILFPHMR 497
>gi|260550687|ref|ZP_05824895.1| lysyl-tRNA synthetase [Acinetobacter sp. RUH2624]
gi|260406193|gb|EEW99677.1| lysyl-tRNA synthetase [Acinetobacter sp. RUH2624]
Length = 520
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/446 (49%), Positives = 316/446 (70%), Gaps = 26/446 (5%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G++ SF+++QD +G +IQLY+ + + K+ K D+GDII A+G +
Sbjct: 87 KVAGRVMLNRGSFMVIQDMTG-----RIQLYVDRKGLPKDTLETIKGLDLGDIIAAEGYI 141
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L + + +L+TKSLRPLP+KF L++ E+KYR RY+DLI+NE TRK F+ R
Sbjct: 142 GRSGKGDLYVHLEGFELLTKSLRPLPDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRA 201
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
++++ IR F+ FMEVETP++H PGGA A+PF THHN+L+M +FLRIAPELYLKRL+
Sbjct: 202 KVVAGIRAFLTNERFMEVETPMMHVIPGGASARPFETHHNALDMPLFLRIAPELYLKRLV 261
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF ++FEIN+NFRNEG+S RHNPEFTMIEFY AY +Y LM TE M++K+ +D +GT
Sbjct: 262 VGGFERVFEINRNFRNEGVSTRHNPEFTMIEFYQAYADYKDLMALTENMLEKLALDILGT 321
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFL----KSELK-KINPKFN 293
T + YQG + F F+K+++ +AI + PQ+ ++ ++ FL + ELK ++ P F
Sbjct: 322 TDVPYQGEVFSFKGPFKKISMFDAILENNPQFTPENVGDREFLAKFVREELKEEVKPGFG 381
Query: 294 QKKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELF 353
K LQ ++FEET ETKL PT+IT YP E SPLAR+ N +N +IT+RFE F
Sbjct: 382 LGK---------LQTIVFEETVETKLRQPTFITEYPAETSPLARR-NDDNPHITDRFEFF 431
Query: 354 IIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCG 413
I G E+ANGFSELNDP +Q+ RF+ Q+ K+ + E + +YD +++ ALEYG+PP +G G
Sbjct: 432 IGGRELANGFSELNDPIDQAERFQAQVAEKDAGDDE-AMHYDAEFVEALEYGLPPTAGEG 490
Query: 414 IGVDRLIMLLTNSKNIRDVILFPHLR 439
IG+DRL+ML ++ +IRDVILFPH+R
Sbjct: 491 IGIDRLVMLFADAPSIRDVILFPHMR 516
>gi|160871773|ref|ZP_02061905.1| lysyl-tRNA synthetase [Rickettsiella grylli]
gi|159120572|gb|EDP45910.1| lysyl-tRNA synthetase [Rickettsiella grylli]
Length = 502
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 228/450 (50%), Positives = 318/450 (70%), Gaps = 28/450 (6%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR MGK F +QD SG K+Q+Y+ + +G Y K D+GDI+G G LF+
Sbjct: 72 MLKRDMGKSLFFDIQDMSG-----KMQIYVKQDTVGVEHYEMIKRLDLGDIVGIVGVLFR 126
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLS--NQEIKYRHRYIDLIINENTRKVFKKRT 118
T T +LS+K + L++K+LRPLP+KF LS ++E +YRHRY+DL+ NE TRK F+ R+
Sbjct: 127 TKTNQLSVKAEKVDLLSKALRPLPDKFHGLSESDKEQRYRHRYLDLMTNEKTRKTFQIRS 186
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I IR F+ + F+EVETP++H PGGA+A+PFITHHN+LNM +FLR+APEL+LKRL+
Sbjct: 187 QLIQEIRQFLNRRGFLEVETPMMHVLPGGALARPFITHHNALNMPLFLRVAPELHLKRLV 246
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GG K+FEIN++FRNEG+S RHNPEFTM+EFY AY++Y LM TE++I+++ + T
Sbjct: 247 VGGMEKVFEINRSFRNEGLSTRHNPEFTMLEFYQAYSDYHDLMDLTEQLIRELAKTILTT 306
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
++ YQG + D SK F++LT+I+A+ +Y P++ D+ +E ++ KKI
Sbjct: 307 EQLTYQGEIYDLSKPFKRLTMIDALLEYNPEWQLNDV-------TEFARL------KKIA 353
Query: 299 NNL----KKDI--LQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFEL 352
+L K+ I LQ +FEET E KL PT+IT YP +SPLAR+ N EN + +RFEL
Sbjct: 354 ADLEIQPKESIGQLQFAVFEETVEEKLKQPTFITQYPIVVSPLARR-NSENPDFADRFEL 412
Query: 353 FIIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGC 412
+I G E+ANGFSELNDPE+Q RFK Q+ K++ + E + YD +YI ALEYG+PP +G
Sbjct: 413 YIGGRELANGFSELNDPEDQRARFKQQLLAKSKGDSE-AMPYDEEYIQALEYGLPPTAGE 471
Query: 413 GIGVDRLIMLLTNSKNIRDVILFPHLRNEN 442
G+G+DRL ML T+S +IRDVILFP +R E+
Sbjct: 472 GMGIDRLTMLFTDSVSIRDVILFPLMRPES 501
>gi|110640530|ref|YP_668258.1| lysyl-tRNA synthetase [Escherichia coli 536]
gi|191171296|ref|ZP_03032846.1| lysyl-tRNA synthetase [Escherichia coli F11]
gi|300988985|ref|ZP_07178881.1| lysyl-tRNA synthetase [Escherichia coli MS 200-1]
gi|422378400|ref|ZP_16458617.1| lysyl-tRNA synthetase [Escherichia coli MS 60-1]
gi|432469644|ref|ZP_19711699.1| lysine-tRNA ligase [Escherichia coli KTE206]
gi|432712000|ref|ZP_19947052.1| lysine-tRNA ligase [Escherichia coli KTE8]
gi|433080828|ref|ZP_20267317.1| lysine-tRNA ligase [Escherichia coli KTE131]
gi|28316248|emb|CAD66193.1| putative lysil-tRNA synthetase LysU [Escherichia coli]
gi|110342122|gb|ABG68359.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli 536]
gi|190908596|gb|EDV68185.1| lysyl-tRNA synthetase [Escherichia coli F11]
gi|300305805|gb|EFJ60325.1| lysyl-tRNA synthetase [Escherichia coli MS 200-1]
gi|324010339|gb|EGB79558.1| lysyl-tRNA synthetase [Escherichia coli MS 60-1]
gi|431000358|gb|ELD16420.1| lysine-tRNA ligase [Escherichia coli KTE206]
gi|431259515|gb|ELF51878.1| lysine-tRNA ligase [Escherichia coli KTE8]
gi|431590327|gb|ELI61420.1| lysine-tRNA ligase [Escherichia coli KTE131]
Length = 498
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 226/439 (51%), Positives = 303/439 (69%), Gaps = 12/439 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M +R+MGK F+ +QD + G+IQLY S++I+ ++ ++D K D GDIIG KG LFK
Sbjct: 69 MSRRIMGKSIFMHIQD-----NKGRIQLYCSSDILPESTFSDIKKLDTGDIIGIKGKLFK 123
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T T ELS+ + L+TKSLRPLP+KF L +QE++YR RY+DLI+N +T + F+ R++I
Sbjct: 124 TKTNELSVNCYEISLLTKSLRPLPDKFHGLLDQELRYRQRYVDLIVNHDTYRTFETRSRI 183
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
++ IR +M ++DFMEVETP++ + PGGA A+PFITHHN+L+ MFLRI+PELYLKRL++G
Sbjct: 184 LTEIRRYMAEHDFMEVETPMMQSIPGGASARPFITHHNALDQDMFLRISPELYLKRLVVG 243
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEGISPRHNPEFTM+E Y AY ++ L+ FTE + + + + +GTT
Sbjct: 244 GFERVFEINRNFRNEGISPRHNPEFTMMELYIAYADFHDLINFTEDLFRTVAQNVLGTTL 303
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I+Y L DF K F KLT+ E+I KY D+ + +K+ +
Sbjct: 304 IEYGDELFDFGKPFNKLTMRESIIKYGNGITLTDIDDIQSASLTARKLGITVEPSWGVGR 363
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
L+ +I FEE E L PT+IT YP EISPLAR+ N +N T+RFE FI EI
Sbjct: 364 LQSEI-----FEEVVEQHLIQPTFITEYPAEISPLARR-NDKNPLYTDRFEFFIGKREIG 417
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RFK Q+ K E E + YYD DY+ ALEYGMPP +G GIG+DR+I
Sbjct: 418 NGFSELNDAEDQAERFKEQVKAK-EAGDEEAMYYDEDYVTALEYGMPPTAGLGIGIDRMI 476
Query: 421 MLLTNSKNIRDVILFPHLR 439
ML TN IRDVI+FP +R
Sbjct: 477 MLFTNCHTIRDVIMFPAMR 495
>gi|33152397|ref|NP_873750.1| lysyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
gi|39932104|sp|Q7VLU5.1|SYK_HAEDU RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|33148620|gb|AAP96139.1| lysyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
Length = 498
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/441 (50%), Positives = 309/441 (70%), Gaps = 13/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
MLKRVMGK SF +QD SG +IQLY++ + + + +Y D +D+GDI+G GTLF
Sbjct: 69 MLKRVMGKASFFTIQDVSG-----QIQLYVARDNLAEGVYVDNVGLWDLGDIVGVCGTLF 123
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGEL+++ + ++L+TKSLRPLPNK Q L +QE++YR RY+DLI NE +R+ F R+Q
Sbjct: 124 KTKTGELTVRCADVELLTKSLRPLPNKHQGLVDQEMRYRQRYLDLIANEQSRRTFVIRSQ 183
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
++S IR F + FMEVETP+L PGGA AKPF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 184 VVSGIRQFFLERGFMEVETPMLQVIPGGAAAKPFVTHHNALDVDMYLRIAPELYLKRLVV 243
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTMIE+Y AY +Y LM TE++++K+ +D +GTT
Sbjct: 244 GGFERVFELNRNFRNEGVSVRHNPEFTMIEYYQAYADYHDLMDNTEQLLRKLALDILGTT 303
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y DF + FE++T+ +AI KY DL + KK+ + + L
Sbjct: 304 AVPYGEYQFDFGQPFERITMHDAIVKYGNGIAREDLDDIEKAVEIAKKLGIEVQKSWGLG 363
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ I FEE E +L PT++ +P EISPLAR+ N EN +T+RFELFI G EI
Sbjct: 364 AVVNAI-----FEEVAEHQLIQPTFLMAHPAEISPLARR-NDENPEVTDRFELFIGGREI 417
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF Q+ K+ + E + + D D++ ALE+G+PP +G G+G+DRL
Sbjct: 418 GNGFSELNDAEDQAARFDAQVAAKDAGDDE-AMFKDDDFVVALEHGLPPTAGEGLGIDRL 476
Query: 420 IMLLTNSKNIRDVILFPHLRN 440
+M+ N+ +IRDVILFP +R+
Sbjct: 477 VMIFANAPSIRDVILFPAMRH 497
>gi|398983879|ref|ZP_10690266.1| lysyl-tRNA synthetase (class II) [Pseudomonas sp. GM24]
gi|399011379|ref|ZP_10713711.1| lysyl-tRNA synthetase (class II) [Pseudomonas sp. GM16]
gi|398118121|gb|EJM07861.1| lysyl-tRNA synthetase (class II) [Pseudomonas sp. GM16]
gi|398156517|gb|EJM44935.1| lysyl-tRNA synthetase (class II) [Pseudomonas sp. GM24]
Length = 500
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 219/441 (49%), Positives = 315/441 (71%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + ++ K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLSEDTLAAVKTWDMGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L ++++S++L+TKSLRPLP+K L++ E +YR RY+DLI+NE+ R+ F+ R+
Sbjct: 124 ARSGKGDLYVEMTSVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEDVRQTFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ K DF+EVETP+L PGGA AKPF THHN+L+M+MFLRIAPELYLKRL+
Sbjct: 184 QVIAHIRSFLMKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGS 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DL + ++ KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTADDLNDIDKARAIAKKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+ N +N N+T+RFELFI G E
Sbjct: 359 GFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDDNPNVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFMAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 477 LVMLLTNSPSIRDVILFPHMR 497
>gi|323497778|ref|ZP_08102792.1| lysyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
gi|323317125|gb|EGA70122.1| lysyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
Length = 505
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 218/443 (49%), Positives = 314/443 (70%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
R+M K F+++Q+TSG +IQ Y + ++ K L ++ DIGDIIG KG L K+
Sbjct: 73 RIMAKRGPFLVIQETSG-----RIQAYAAKDV-QKALKEKYQGLDIGDIIGVKGALHKSG 126
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE++YR RY+DLI+N+++R+ F R++++S
Sbjct: 127 KGDLYVNMEEYELLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNQDSREAFIIRSKLVS 186
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
SIR+FM ++EVETP++H PGGA A+PFITHHN+L++ M+LR+APELYLKRL++GGF
Sbjct: 187 SIRNFMSSKGYLEVETPMMHVIPGGATARPFITHHNALDIDMYLRVAPELYLKRLVVGGF 246
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
+++FEIN+NFRNEG+SPRHNPEFTM+EFY AY++Y LM TE+M+ + MD +G+T +
Sbjct: 247 DRVFEINRNFRNEGLSPRHNPEFTMMEFYQAYSDYKDLMDLTEEMLSTVAMDVLGSTSMP 306
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y ++F ++ ++++ EAIK Y P + EI DLQ++ + + K ++ +
Sbjct: 307 YGEETVEFGGTYARMSMFEAIKHYNPDHAEIQALTEADLQDREKMVAIAKSVHVEVETFW 366
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E +L PT+IT YP +ISPLAR+S+ +N T+RFE FI G
Sbjct: 367 TCGQLLEEI-----FGETAEPQLIQPTFITGYPADISPLARRSD-DNPFFTDRFEFFIGG 420
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND E+Q RFK Q+D K+ + E + YYD DYI ALE+G+PP +G GIG+
Sbjct: 421 REVANGFSELNDAEDQDARFKAQVDAKDAGDDE-AMYYDADYITALEHGLPPTAGQGIGI 479
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL ML TN+ IRDVILFP +R
Sbjct: 480 DRLAMLFTNTHTIRDVILFPAMR 502
>gi|447915598|ref|YP_007396166.1| lysyl-tRNA ligase [Pseudomonas poae RE*1-1-14]
gi|445199461|gb|AGE24670.1| lysyl-tRNA ligase [Pseudomonas poae RE*1-1-14]
Length = 500
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 219/441 (49%), Positives = 313/441 (70%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + + K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLPEETLASVKTWDMGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L ++++S++L+TKSLRPLP+K L++ E +YR RY+DLI+NE+ R+ F+ R+
Sbjct: 124 ARSGKGDLYVEMTSVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEDVRQTFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ K DF+EVETP+L PGGA AKPF THHN+L++ MFLRIAPELYLKRL+
Sbjct: 184 QVIAHIRSFLAKRDFLEVETPMLQTIPGGAAAKPFETHHNALDLPMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGS 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y +L F + F +L++ ++I KY P+ DL + ++ KK K+L
Sbjct: 304 TDVPYGDKLFHFGEPFVRLSVFDSILKYNPELTAADLNDIDKARAIAKKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+ N +N N+T+RFELFI G E
Sbjct: 359 GFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDDNPNVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFMAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 477 LVMLLTNSPSIRDVILFPHMR 497
>gi|262163921|ref|ZP_06031660.1| lysyl-tRNA synthetase (class II) [Vibrio mimicus VM223]
gi|449144113|ref|ZP_21774930.1| heat inducible lysyl-tRNA synthetase [Vibrio mimicus CAIM 602]
gi|262027449|gb|EEY46115.1| lysyl-tRNA synthetase (class II) [Vibrio mimicus VM223]
gi|449080213|gb|EMB51130.1| heat inducible lysyl-tRNA synthetase [Vibrio mimicus CAIM 602]
Length = 510
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/443 (49%), Positives = 311/443 (70%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM K F+++Q+TSG +IQ Y S E+ + L ++ DIGDIIG +G L K+
Sbjct: 78 RVMAKRGPFLVIQETSG-----RIQAYASKEV-QQELKDKYQGLDIGDIIGVQGALHKSG 131
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE++YR RY+DLI+NEN+R F R++++S
Sbjct: 132 KGDLYVNMEQFQLLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNENSRNAFVVRSKVMS 191
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM FMEVETP++H PGGA A+PFITHHN+L+M M+LRIAPELYLKRL++GGF
Sbjct: 192 AIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPMYLRIAPELYLKRLVVGGF 251
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
+++FEIN+NFRNEG+SPRHNPEFTM+EFY AY +Y LM TE+++ + ++ +G+T +
Sbjct: 252 DRVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLGSTSMP 311
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y ++F + ++++ +AIK Y P + +I D+QN+ + S K ++
Sbjct: 312 YGEHTVEFGGKYARMSMFDAIKHYNPNHAQIQALTEEDIQNRDLMVSIAKSVHVDVEPFW 371
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E KL PT+IT YP +ISPLAR+S+ +N T+RFE FI G
Sbjct: 372 TCGQLLEEI-----FGETAEPKLMQPTFITGYPADISPLARRSD-DNPFFTDRFEFFIGG 425
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND E+Q RFK Q++ K + E + +YD DYI ALE+G+PP +G GIG+
Sbjct: 426 REVANGFSELNDAEDQDARFKAQVEAKESGDDE-AMFYDADYITALEHGLPPTAGQGIGI 484
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL+MLLTN+ IRDVILFP +R
Sbjct: 485 DRLVMLLTNTHTIRDVILFPAMR 507
>gi|388471742|ref|ZP_10145951.1| lysine--tRNA ligase [Pseudomonas synxantha BG33R]
gi|388008439|gb|EIK69705.1| lysine--tRNA ligase [Pseudomonas synxantha BG33R]
Length = 500
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 219/441 (49%), Positives = 314/441 (71%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + + K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLSEETLASVKTWDMGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L ++++S++L+TKSLRPLP+K L++ E +YR RY+DLI+NE+ R+ F+ R+
Sbjct: 124 ARSGKGDLYVEMTSVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEDVRQTFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ + DF+EVETP+L PGGA AKPF THHN+L+M+MFLRIAPELYLKRL+
Sbjct: 184 QVIAHIRSFLMQRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +GT
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGT 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DL + ++ KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTADDLNDIDKARAIAKKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+ N +N N+T+RFELFI G E
Sbjct: 359 GFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDDNPNVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFMAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 477 LVMLLTNSPSIRDVILFPHMR 497
>gi|262401637|ref|ZP_06078203.1| lysyl-tRNA synthetase (class II) [Vibrio sp. RC586]
gi|262352054|gb|EEZ01184.1| lysyl-tRNA synthetase (class II) [Vibrio sp. RC586]
Length = 510
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/443 (49%), Positives = 311/443 (70%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM K F+++Q+TSG +IQ Y S E+ + L ++ DIGDIIG +G L K+
Sbjct: 78 RVMAKRGPFLVIQETSG-----RIQAYASKEV-QQELKEKYQGLDIGDIIGVQGALHKSG 131
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE++YR RY+DLI+NEN+R F R++++S
Sbjct: 132 KGDLYVNMEQFQLLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNENSRNAFVVRSKVMS 191
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM FMEVETP++H PGGA A+PFITHHN+L+M M+LRIAPELYLKRL++GGF
Sbjct: 192 AIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPMYLRIAPELYLKRLVVGGF 251
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
+++FEIN+NFRNEG+SPRHNPEFTM+EFY AY +Y LM TE+++ + ++ +G+T +
Sbjct: 252 DRVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLGSTSMP 311
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y ++F + ++++ +AIK Y P + +I D+QN+ + S K ++
Sbjct: 312 YGEHTVEFGGKYARMSMFDAIKHYNPNHAQIQALTEDDIQNRDLMVSIAKSVHVDVEPFW 371
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E KL PT+IT YP +ISPLAR+S+ +N T+RFE FI G
Sbjct: 372 TCGQLLEEI-----FGETAEPKLMQPTFITGYPADISPLARRSD-DNPFFTDRFEFFIGG 425
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND E+Q RFK Q++ K + E + +YD DYI ALE+G+PP +G GIG+
Sbjct: 426 REVANGFSELNDAEDQDARFKAQVEAKESGDDE-AMFYDADYITALEHGLPPTAGQGIGI 484
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL+MLLTN+ IRDVILFP +R
Sbjct: 485 DRLVMLLTNTHTIRDVILFPAMR 507
>gi|255319145|ref|ZP_05360363.1| lysyl-tRNA synthetase [Acinetobacter radioresistens SK82]
gi|262379277|ref|ZP_06072433.1| lysyl-tRNA synthetase [Acinetobacter radioresistens SH164]
gi|255303791|gb|EET82990.1| lysyl-tRNA synthetase [Acinetobacter radioresistens SK82]
gi|262298734|gb|EEY86647.1| lysyl-tRNA synthetase [Acinetobacter radioresistens SH164]
Length = 509
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/444 (49%), Positives = 321/444 (72%), Gaps = 20/444 (4%)
Query: 4 RVM-GKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM + SFI++QD +G +IQLY++ + + + K D+GDII KG + ++
Sbjct: 80 RVMLNRGSFIVIQDMTG-----RIQLYVARKELDEQTLASIKGLDLGDIIAVKGYIGRSG 134
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TKSLRPLP+KF L++ E+KYR RY+DLI+NE TRK F+ R ++++
Sbjct: 135 KGDLYVHIEHFELLTKSLRPLPDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRAKVVA 194
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
IR ++ FMEVETP++H PGGA A+PF THHN+L+M +FLRIAPELYLKRL++GGF
Sbjct: 195 GIRSYLNSERFMEVETPMMHVIPGGASARPFETHHNALDMPLFLRIAPELYLKRLVVGGF 254
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
++FEIN+NFRNEG+S RHNPEFTMIEFY AY +Y LM+ TE M++K+ +D +GTT +
Sbjct: 255 ERVFEINRNFRNEGVSTRHNPEFTMIEFYQAYADYKDLMQLTENMLEKLALDILGTTDVP 314
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFL----KSELKKINPKFNQKKIL 298
YQG + +F ++K+++ +AI ++ P++ ++ ++ FL + ELK+ Q K
Sbjct: 315 YQGEVFNFKGPYKKISMFDAILEHNPEFTPENVNDREFLAKFVREELKE------QVKAG 368
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
L K LQ ++FEET ETKL PT+IT YP E SPLAR++N +N +IT+RFE FI G E
Sbjct: 369 FGLGK--LQTIVFEETVETKLRQPTFITEYPAETSPLARRNN-DNPHITDRFEFFIGGRE 425
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
+ANGFSELNDP +Q+ RF+ Q++ K+ + E + +YD ++I ALEYG+PP +G GIG+DR
Sbjct: 426 LANGFSELNDPIDQAERFQAQVEEKDAGDDE-AMHYDAEFIEALEYGLPPTAGEGIGIDR 484
Query: 419 LIMLLTNSKNIRDVILFPHLRNEN 442
L+M+ ++ +IRDVILFPH+R ++
Sbjct: 485 LVMIFADAPSIRDVILFPHMRRKD 508
>gi|409426440|ref|ZP_11260995.1| lysyl-tRNA ligase [Pseudomonas sp. HYS]
Length = 500
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 219/441 (49%), Positives = 314/441 (71%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + + K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLSEETLAAVKTWDLGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L ++++S++L+TKSLRPLP+K L++ E +YR RY+DL++NE TR F+ R+
Sbjct: 124 ARSGKGDLYVEMTSVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLMVNEETRHTFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR+F+ DF+EVETP+L PGGA AKPF THHN+L+M+MFLRIAPELYLKRL+
Sbjct: 184 QVIAHIRNFLMARDFLEVETPMLQTIPGGAAAKPFETHHNALDMQMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY A+ +Y M TE++ +++ +GT
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAHADYEDNMDLTEELFRELAQLVLGT 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ + DLQ+ ++ K K+L
Sbjct: 304 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPEISAADLQDIDKARAIAKNAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+ N EN N+T+RFELFI G E
Sbjct: 359 GFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDENPNVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFMAQVAEKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 477 LVMLLTNSPSIRDVILFPHMR 497
>gi|404497215|ref|YP_006721321.1| lysyl-tRNA ligase [Geobacter metallireducens GS-15]
gi|418066623|ref|ZP_12703983.1| lysyl-tRNA synthetase [Geobacter metallireducens RCH3]
gi|78194818|gb|ABB32585.1| lysyl-tRNA synthetase [Geobacter metallireducens GS-15]
gi|373560116|gb|EHP86388.1| lysyl-tRNA synthetase [Geobacter metallireducens RCH3]
Length = 491
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 222/441 (50%), Positives = 305/441 (69%), Gaps = 13/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
+ +R GK +F+ LQD G+IQLY+ + +G Y F+++DIGDIIGA GT F+
Sbjct: 63 IARRSFGKAAFVQLQD-----RKGRIQLYVRKDTLGDEAYEAFESFDIGDIIGATGTPFR 117
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+ S ++L+TKS PLP KF L++ E +YR RY+DLI+N R+VF KR++I
Sbjct: 118 TKTGELSLNASEVRLLTKSFLPLPEKFHGLTDVETRYRQRYVDLIVNPEVREVFIKRSRI 177
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
++ IR FM ++DF+EVETP++ PGGA A+PF+THHN+L+M++FLRIAPELYLKRL++G
Sbjct: 178 VNLIREFMVRHDFLEVETPMMQPIPGGATARPFVTHHNALDMELFLRIAPELYLKRLVVG 237
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEGIS RHNPEFTM+EFY AY + LM FTE+++ + + +GT
Sbjct: 238 GFERVFEINRNFRNEGISVRHNPEFTMMEFYQAYATFEDLMDFTEELLCHVTQEVLGTLD 297
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
YQG + F + +++LT+ EAI +Y D+ K +L + + +
Sbjct: 298 FTYQGVEISFQRPWKRLTVKEAILEYG------DIDAKSLEDRDLAYAYARSIGLDLPTD 351
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
+ L +FEE E KL PT+IT YPTE+SPL+RKS+ ++ +I +RFE F G E+A
Sbjct: 352 VGYGKLITEIFEEVAEVKLIQPTFITAYPTEVSPLSRKSD-KDPDIVDRFEFFCAGREMA 410
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
N FSELNDP +Q RF Q+ K + + E + Y D DYI ALEYGMPP +G GIG+DRL+
Sbjct: 411 NAFSELNDPVDQKERFLGQVAQKAKGDEE-AHYMDEDYIRALEYGMPPTAGEGIGIDRLV 469
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S +IRDVILFP LR E
Sbjct: 470 MLLTDSPSIRDVILFPQLRKE 490
>gi|398892867|ref|ZP_10645822.1| lysyl-tRNA synthetase (class II) [Pseudomonas sp. GM55]
gi|398184968|gb|EJM72394.1| lysyl-tRNA synthetase (class II) [Pseudomonas sp. GM55]
Length = 500
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/441 (49%), Positives = 313/441 (70%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + + K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLSEETLAAVKTWDMGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L ++++S++L+TKSLRPLP+K L++ E +YR RY+DLI+NE+ R+ F+ R+
Sbjct: 124 ARSGKGDLYVEMTSVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEDVRQTFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ K DF+EVETP+L PGGA AKPF THHN+L+M MFLRIAPELYLKRL+
Sbjct: 184 QVIAHIRSFLMKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMGMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGS 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DL + ++ KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTADDLNDIDKARAIAKKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+ N EN N+T+RFELFI G E
Sbjct: 359 GFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDENPNVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFMAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 477 LVMLLTNSPSIRDVILFPHMR 497
>gi|378949028|ref|YP_005206516.1| LysS protein [Pseudomonas fluorescens F113]
gi|359759042|gb|AEV61121.1| LysS [Pseudomonas fluorescens F113]
Length = 500
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 217/435 (49%), Positives = 312/435 (71%), Gaps = 12/435 (2%)
Query: 5 VMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTNTG 64
V+ + SF+++QD +G ++Q+Y++ + + + K +D+GDII A+GTL ++ G
Sbjct: 75 VLDRGSFMVIQDMTG-----RLQVYVNRKTLPEETLAAVKTWDLGDIIAAEGTLARSGKG 129
Query: 65 ELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIISSI 124
+L ++++S++L+TKSLRPLP+K L++ E +YR RY+DLI+NE+ R+ F+ R+Q+I+ I
Sbjct: 130 DLYVEMTSVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEDVRQTFRVRSQVIAHI 189
Query: 125 RHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGFNK 184
R F+ K DF+EVETP+L PGGA AKPF THHN+L+M+MFLRIAPELYLKRL++GGF K
Sbjct: 190 RSFLMKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMFLRIAPELYLKRLVVGGFEK 249
Query: 185 IFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKIDYQ 244
+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +GTT + Y
Sbjct: 250 VFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGTTDVPYG 309
Query: 245 GRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNNLKKD 304
++ F + F +L++ ++I KY P+ DL + ++ KK K+L
Sbjct: 310 DKVFHFGEPFVRLSVFDSILKYNPELTADDLNDIEKARAIAKKAG-----AKVLGFEGLG 364
Query: 305 ILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIANGFS 364
LQ+M+FEE E KL P +IT YP E+SPLAR+ N EN ++T+RFELFI G EIAN +S
Sbjct: 365 KLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDENPSVTDRFELFIGGREIANAYS 423
Query: 365 ELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLIMLLT 424
ELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DRL+MLLT
Sbjct: 424 ELNDAEDQAERFMAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDRLVMLLT 482
Query: 425 NSKNIRDVILFPHLR 439
NS +IRDVILFPH+R
Sbjct: 483 NSPSIRDVILFPHMR 497
>gi|407692514|ref|YP_006817303.1| lysyl-tRNA ligase [Actinobacillus suis H91-0380]
gi|407388571|gb|AFU19064.1| lysyl-tRNA ligase [Actinobacillus suis H91-0380]
Length = 500
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 226/447 (50%), Positives = 313/447 (70%), Gaps = 25/447 (5%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
MLKRVMGK SF +QD SG +IQLY++ + + + +Y D +D+GDI+G GTLF
Sbjct: 71 MLKRVMGKASFFTIQDVSG-----QIQLYVARDNLAEGVYADKVSMWDLGDIVGVAGTLF 125
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGEL+++ S ++L+TKSLRPLPNK Q L++QE +YR RY+DLI NE +R+ F R++
Sbjct: 126 KTKTGELTVRCSEVELLTKSLRPLPNKVQGLTDQETRYRQRYLDLISNEESRRTFMIRSK 185
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
++S IR F + DF+EVETP+L PGGA AKPFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 186 VVSGIRQFFLEKDFIEVETPMLQVIPGGAAAKPFITHHNALDVDMYLRIAPELYLKRLVV 245
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTMIE+Y AY +Y LM TE++++K+ +D +GTT
Sbjct: 246 GGFERVFELNRNFRNEGVSVRHNPEFTMIEYYQAYADYHDLMDNTEELLRKLAIDILGTT 305
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKS-ELKK-----INPKFN 293
+ Y + DF K FE++T+ +AI KY DL + F KS E+ K I +
Sbjct: 306 TVPYGEYVFDFGKPFERITMHDAIVKYGNGITREDLDS--FEKSVEIAKGLGIEIQKSWG 363
Query: 294 QKKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELF 353
++N +FEE E +L PT++ +P EISPLAR+ N EN +T+RFELF
Sbjct: 364 LGSVVN---------AIFEEVAEHQLIQPTFLMAHPAEISPLARR-NDENPEVTDRFELF 413
Query: 354 IIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCG 413
I G EI NGFSELND E+Q+ RF Q+ K+ + E + + D D++ ALE+G+PP +G G
Sbjct: 414 IGGREIGNGFSELNDAEDQAERFDAQVAAKDAGDDE-AMFKDEDFVVALEHGLPPTAGEG 472
Query: 414 IGVDRLIMLLTNSKNIRDVILFPHLRN 440
+G+DRL M+ N+ +IRDVILFP +R
Sbjct: 473 LGIDRLAMIFANAPSIRDVILFPAMRQ 499
>gi|392421937|ref|YP_006458541.1| lysyl-tRNA ligase [Pseudomonas stutzeri CCUG 29243]
gi|390984125|gb|AFM34118.1| lysyl-tRNA ligase [Pseudomonas stutzeri CCUG 29243]
Length = 500
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 219/443 (49%), Positives = 313/443 (70%), Gaps = 17/443 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I F++LQD SG +IQ+Y+ + + K++D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGPFMVLQDMSG-----RIQVYVDRKTLPAEQVEAVKHFDLGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L + ++S++L+TKSLRPLP+KF L++ E +YR RY+DL++NE R+ F+ R+
Sbjct: 124 ARSGKGDLYVYMNSVRLLTKSLRPLPDKFHGLTDTEQRYRQRYVDLMVNEEVRETFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+IS IR F+ + DF+EVETP+L PGGA AKPF THHN+L+M MFLRIAPELYLKRL+
Sbjct: 184 QVISHIRKFLAERDFLEVETPMLQTIPGGAAAKPFETHHNALDMPMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF ++FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 244 VGGFERVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAEAVLGS 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I K+ P+ + DL + ++ KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFARLSVFDSILKFNPEISADDLNDVEKARAIAKKAG-----AKLL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
+ LQ+M+FEE E KL PT+IT YP E+SPLAR+ N N N+T+RFELFI G E
Sbjct: 359 GHEGLGKLQVMIFEELVEHKLEQPTFITEYPFEVSPLARR-NDRNPNVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + ++D D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFHAQVADKDAGDDE-AMHFDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLRNE 441
L+MLLTNS +IRDVILFPH+R E
Sbjct: 477 LVMLLTNSPSIRDVILFPHMRPE 499
>gi|32035006|ref|ZP_00135078.1| COG1190: Lysyl-tRNA synthetase (class II) [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126208285|ref|YP_001053510.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 5b
str. L20]
gi|165976226|ref|YP_001651819.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
str. JL03]
gi|303251193|ref|ZP_07337372.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|303252272|ref|ZP_07338438.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
str. 4226]
gi|307247791|ref|ZP_07529828.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
str. S1536]
gi|307250030|ref|ZP_07531998.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4
str. M62]
gi|307252383|ref|ZP_07534280.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|307254631|ref|ZP_07536462.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
str. CVJ13261]
gi|307256857|ref|ZP_07538635.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10
str. D13039]
gi|307259082|ref|ZP_07540812.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11
str. 56153]
gi|189082343|sp|A3N0G9.1|SYK_ACTP2 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|226710880|sp|B0BP90.1|SYK_ACTPJ RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|126097077|gb|ABN73905.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 5b
str. L20]
gi|165876327|gb|ABY69375.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
str. JL03]
gi|302648731|gb|EFL78921.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
str. 4226]
gi|302649927|gb|EFL80104.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|306855734|gb|EFM87900.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
str. S1536]
gi|306857952|gb|EFM90040.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4
str. M62]
gi|306860305|gb|EFM92321.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|306862426|gb|EFM94389.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
str. CVJ13261]
gi|306864591|gb|EFM96496.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10
str. D13039]
gi|306866749|gb|EFM98607.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11
str. 56153]
Length = 500
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 226/447 (50%), Positives = 313/447 (70%), Gaps = 25/447 (5%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
MLKRVMGK SF +QD SG +IQLY++ + + + +Y D +D+GDI+G GTLF
Sbjct: 71 MLKRVMGKASFFTIQDVSG-----QIQLYVARDNLAEGVYADKVSMWDLGDIVGVAGTLF 125
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGEL+++ S ++L+TKSLRPLPNK Q L++QE +YR RY+DLI NE +R+ F R++
Sbjct: 126 KTKTGELTVRCSEVELLTKSLRPLPNKVQGLTDQETRYRQRYLDLISNEESRRTFMIRSK 185
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
++S IR F + DF+EVETP+L PGGA AKPFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 186 VVSGIRQFFLEKDFIEVETPMLQVIPGGAAAKPFITHHNALDVDMYLRIAPELYLKRLVV 245
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTMIE+Y AY +Y LM TE++++K+ +D +GTT
Sbjct: 246 GGFERVFELNRNFRNEGVSVRHNPEFTMIEYYQAYADYHDLMDNTEELLRKLAIDILGTT 305
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKS-ELKK-----INPKFN 293
+ Y + DF K FE++T+ +AI KY DL + F KS E+ K I +
Sbjct: 306 TVPYGEYVFDFGKPFERITMHDAIVKYGNGITREDLDS--FEKSVEIAKGLGIEIQKSWG 363
Query: 294 QKKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELF 353
++N +FEE E +L PT++ +P EISPLAR+ N EN +T+RFELF
Sbjct: 364 LGSVVN---------AIFEEVAEHQLIQPTFLMAHPAEISPLARR-NDENPEVTDRFELF 413
Query: 354 IIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCG 413
I G EI NGFSELND E+Q+ RF Q+ K+ + E + + D D++ ALE+G+PP +G G
Sbjct: 414 IGGREIGNGFSELNDAEDQAERFDAQVAAKDAGDDE-AMFKDEDFVVALEHGLPPTAGEG 472
Query: 414 IGVDRLIMLLTNSKNIRDVILFPHLRN 440
+G+DRL M+ N+ +IRDVILFP +R
Sbjct: 473 LGIDRLAMIFANAPSIRDVILFPAMRQ 499
>gi|184157279|ref|YP_001845618.1| lysyl-tRNA synthetase [Acinetobacter baumannii ACICU]
gi|332872864|ref|ZP_08440828.1| lysine--tRNA ligase [Acinetobacter baumannii 6014059]
gi|384130944|ref|YP_005513556.1| lysyl-tRNA synthetase [Acinetobacter baumannii 1656-2]
gi|384142348|ref|YP_005525058.1| lysyl-tRNA synthetase [Acinetobacter baumannii MDR-ZJ06]
gi|385236645|ref|YP_005797984.1| lysyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715]
gi|416148128|ref|ZP_11602177.1| lysyl-tRNA synthetase [Acinetobacter baumannii AB210]
gi|417576220|ref|ZP_12227065.1| lysine--tRNA ligase [Acinetobacter baumannii Naval-17]
gi|421631083|ref|ZP_16071772.1| lysine--tRNA ligase [Acinetobacter baumannii OIFC180]
gi|421689318|ref|ZP_16129002.1| lysine--tRNA ligase [Acinetobacter baumannii IS-143]
gi|445475372|ref|ZP_21453374.1| lysine--tRNA ligase [Acinetobacter baumannii Naval-78]
gi|183208873|gb|ACC56271.1| Lysyl-tRNA synthetase (class II) [Acinetobacter baumannii ACICU]
gi|322507164|gb|ADX02618.1| Lysyl-tRNA synthetase [Acinetobacter baumannii 1656-2]
gi|323517143|gb|ADX91524.1| lysyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715]
gi|332738875|gb|EGJ69738.1| lysine--tRNA ligase [Acinetobacter baumannii 6014059]
gi|333365135|gb|EGK47149.1| lysyl-tRNA synthetase [Acinetobacter baumannii AB210]
gi|347592841|gb|AEP05562.1| lysyl-tRNA synthetase (class II) [Acinetobacter baumannii MDR-ZJ06]
gi|395569441|gb|EJG30103.1| lysine--tRNA ligase [Acinetobacter baumannii Naval-17]
gi|404558698|gb|EKA63979.1| lysine--tRNA ligase [Acinetobacter baumannii IS-143]
gi|408695249|gb|EKL40805.1| lysine--tRNA ligase [Acinetobacter baumannii OIFC180]
gi|444779036|gb|ELX03031.1| lysine--tRNA ligase [Acinetobacter baumannii Naval-78]
Length = 520
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/446 (49%), Positives = 316/446 (70%), Gaps = 26/446 (5%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G++ SF+++QD +G +IQLY+ + + K+ K D+GDII A+G +
Sbjct: 87 KVAGRVMLNRGSFMVIQDMTG-----RIQLYVDRKGLPKDTLETIKGLDLGDIIAAEGYI 141
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L + + +L+TKSLRPLP+KF L++ E+KYR RY+DLI+NE TRK F+ R
Sbjct: 142 GRSGKGDLYVHLEGFELLTKSLRPLPDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRA 201
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
++++ IR F+ FMEVETP++H PGGA A+PF THHN+L+M +FLRIAPELYLKRL+
Sbjct: 202 KVVAGIRAFLTNERFMEVETPMMHVIPGGASARPFETHHNALDMPLFLRIAPELYLKRLV 261
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF ++FEIN+NFRNEG+S RHNPEFTMIEFY AY +Y LM TE M++K+ +D +GT
Sbjct: 262 VGGFERVFEINRNFRNEGVSTRHNPEFTMIEFYQAYADYKDLMALTENMLEKLAIDILGT 321
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFL----KSELK-KINPKFN 293
T + YQG + F F+K+++ +AI + PQ+ ++ ++ FL + ELK ++ P F
Sbjct: 322 TDVPYQGEVFSFKGPFKKISMFDAILENNPQFTPENVGDREFLAKFVREELKEEVKPGFG 381
Query: 294 QKKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELF 353
K LQ ++FEET ETKL PT+IT YP E SPLAR+ N +N +IT+RFE F
Sbjct: 382 LGK---------LQTIVFEETVETKLRQPTFITEYPAETSPLARR-NDDNPHITDRFEFF 431
Query: 354 IIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCG 413
I G E+ANGFSELNDP +Q+ RF+ Q+ K+ + E + +YD +++ ALEYG+PP +G G
Sbjct: 432 IGGRELANGFSELNDPIDQAERFQAQVAEKDAGDDE-AMHYDAEFVEALEYGLPPTAGEG 490
Query: 414 IGVDRLIMLLTNSKNIRDVILFPHLR 439
IG+DRL+ML ++ +IRDVILFPH+R
Sbjct: 491 IGIDRLVMLFADAPSIRDVILFPHMR 516
>gi|304311880|ref|YP_003811478.1| Lysyl-tRNA synthetase [gamma proteobacterium HdN1]
gi|301797613|emb|CBL45834.1| Lysyl-tRNA synthetase [gamma proteobacterium HdN1]
Length = 500
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 212/440 (48%), Positives = 318/440 (72%), Gaps = 13/440 (2%)
Query: 4 RVM-GKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM + +F+++QD +G KIQLY++ +++ + D K++D+GDI+G KG L ++N
Sbjct: 73 RVMRNRGAFLVIQDMTG-----KIQLYVNRQVLAPEVLDDIKSWDLGDIVGVKGILHRSN 127
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
GEL + ++ L+ KSLRPLP+KF+ LS+QE++YR RY+DLI+NE R F+ R+Q +
Sbjct: 128 KGELYVDMAEAHLLVKSLRPLPDKFKGLSDQEMRYRQRYVDLIVNEEVRNTFRVRSQTVD 187
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
IR+++++ DF+EVETP++ PGGA A+PF+T HN+L++ ++LRIAPEL+LKRL++GGF
Sbjct: 188 YIRNYLKQRDFLEVETPMMQVIPGGATARPFVTFHNALDIDLYLRIAPELFLKRLVVGGF 247
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
++FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y LM TE+M++ + +G+T++
Sbjct: 248 ERVFEINRNFRNEGLSTRHNPEFTMLEFYQAYADYRDLMDLTEEMLRGLAETVLGSTQVH 307
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNNLK 302
YQG + DF K F ++T++EAI + P DL+ + E + I ++
Sbjct: 308 YQGDVYDFGKPFRRMTVVEAILHFNP-----DLRAEQLATREAACEVAARLEIAIKDSYG 362
Query: 303 KDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIANG 362
+Q+ +FE T E +L +PT+IT YPTE+SPLAR+ N + +T+RFE F+ G EIANG
Sbjct: 363 LGKIQIEIFEATAEHQLKDPTFITAYPTEVSPLARR-NDHDPFVTDRFEFFVGGREIANG 421
Query: 363 FSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLIML 422
FSELND E+Q+ RF+ Q++ K+ + E + ++D DYI ALEYG+PP +G GIG+DRL+ML
Sbjct: 422 FSELNDSEDQAERFQKQVESKDAGDDE-AMHFDQDYITALEYGLPPTAGEGIGIDRLVML 480
Query: 423 LTNSKNIRDVILFPHLRNEN 442
LT+S +IRDVILFPH+R ++
Sbjct: 481 LTDSPSIRDVILFPHMRPQS 500
>gi|237800111|ref|ZP_04588572.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331022967|gb|EGI03024.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 500
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 217/441 (49%), Positives = 316/441 (71%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + + + K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLPEETLAEVKTWDLGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L ++++S++L+TKSLRPLP+K L++ E +YR RY+DLI+NE+ R+ F+ R+
Sbjct: 124 ARSGKGDLYVEMTSVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEDVRETFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ K DF+EVETP+L PGGA AKPF THHN+L+++MFLRIAPELYLKRL+
Sbjct: 184 QVIAHIRSFLMKRDFLEVETPMLQTIPGGAAAKPFETHHNALDLEMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGS 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P DLQ+ ++ KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPDLTAADLQDVDKARAIAKKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+ N +N ++T+RFELFI G E
Sbjct: 359 GFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDDNPSVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF+ Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFQAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLT+S +IRDVILFPH+R
Sbjct: 477 LVMLLTDSPSIRDVILFPHMR 497
>gi|398906440|ref|ZP_10653462.1| lysyl-tRNA synthetase (class II) [Pseudomonas sp. GM50]
gi|398173238|gb|EJM61081.1| lysyl-tRNA synthetase (class II) [Pseudomonas sp. GM50]
Length = 500
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/441 (49%), Positives = 313/441 (70%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + ++ K +D+GDII A GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLSEDTLAAVKTWDMGDIIAAVGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L ++++S++L+TKSLRPLP+K L++ E +YR RY+DLI+NE R+ F+ R+
Sbjct: 124 ARSGKGDLYVEMTSVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEEVRQTFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ K DF+EVETP+L PGGA AKPF THHN+L+M+MFLRIAPELYLKRL+
Sbjct: 184 QVIAHIRSFLMKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGS 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DL + ++ KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTADDLTDIDKARAIAKKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+ N EN N+T+RFELFI G E
Sbjct: 359 GFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDENPNVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFMAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 477 LVMLLTNSPSIRDVILFPHMR 497
>gi|424032054|ref|ZP_17771475.1| lysine--tRNA ligase [Vibrio cholerae HENC-01]
gi|424035035|ref|ZP_17774369.1| lysine--tRNA ligase [Vibrio cholerae HENC-02]
gi|408876466|gb|EKM15583.1| lysine--tRNA ligase [Vibrio cholerae HENC-01]
gi|408899777|gb|EKM33761.1| lysine--tRNA ligase [Vibrio cholerae HENC-02]
Length = 505
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 219/443 (49%), Positives = 315/443 (71%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
R+M K F+++Q+TSG +IQ Y +++ + K L ++ DIGDIIG KG L K+
Sbjct: 73 RIMAKRGPFLVIQETSG-----RIQAY-ADKAVQKVLKDKYQGLDIGDIIGVKGALHKSG 126
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE++YR RY+DLI+NE++R+ F R++++S
Sbjct: 127 KGDLYVNMEEYELLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSRQAFVVRSKVMS 186
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM FMEVETP++H PGGA A+PFITHHN+L+M M+LRIAPELYLKRL++GGF
Sbjct: 187 AIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPMYLRIAPELYLKRLVVGGF 246
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
+++FEIN+NFRNEG+SPRHNPEFTM+EFY AY +Y LM TE+++ + ++ +G+T +
Sbjct: 247 DRVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLGSTSMP 306
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y ++F ++ ++++ EAIK Y P + +I D+QN+ + S K ++ +
Sbjct: 307 YGDDTVEFGGTYTRMSMFEAIKHYNPDHAQIQALTEEDIQNRDLMVSIAKSVHVEVEPFW 366
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E KL PT+IT YP +ISPLAR+S+ +N T+RFE FI G
Sbjct: 367 TCGQLLEEI-----FGETAEPKLMQPTFITGYPADISPLARRSD-DNPFFTDRFEFFIGG 420
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND E+Q RFK Q++ K + E + +YD DYI ALE+G+PP +G GIG+
Sbjct: 421 REVANGFSELNDAEDQDARFKAQVEAKESGDDE-AMFYDADYITALEHGLPPTAGQGIGI 479
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL+MLLTN+ IRDVILFP +R
Sbjct: 480 DRLVMLLTNTHTIRDVILFPAMR 502
>gi|260555931|ref|ZP_05828151.1| lysyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606 = CIP
70.34]
gi|260410842|gb|EEX04140.1| lysyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606 = CIP
70.34]
Length = 520
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/446 (49%), Positives = 316/446 (70%), Gaps = 26/446 (5%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G++ SF+++QD +G +IQLY+ + + K+ K D+GDII A+G +
Sbjct: 87 KVAGRVMLNRGSFMVIQDMTG-----RIQLYVDRKGLPKDTLETIKGLDLGDIIAAEGYI 141
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L + + +L+TKSLRPLP+KF L++ E+KYR RY+DLI+NE TRK F+ R
Sbjct: 142 GRSGKGDLYVHLEGFELLTKSLRPLPDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRA 201
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
++++ IR F+ FMEVETP++H PGGA A+PF THHN+L+M +FLRIAPELYLKRL+
Sbjct: 202 KVVAGIRAFLTNERFMEVETPMMHVIPGGASARPFETHHNALDMPLFLRIAPELYLKRLV 261
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF ++FEIN+NFRNEG+S RHNPEFTMIEFY AY +Y LM TE M++K+ +D +GT
Sbjct: 262 VGGFERVFEINRNFRNEGVSTRHNPEFTMIEFYQAYADYKDLMALTENMLEKLAIDILGT 321
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFL----KSELK-KINPKFN 293
T + YQG + F F+K+++ +AI + PQ+ ++ ++ FL + ELK ++ P F
Sbjct: 322 TDVPYQGEVFSFKGPFKKISMFDAILENNPQFTPENVGDREFLAKFIREELKEEVKPGFG 381
Query: 294 QKKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELF 353
K LQ ++FEET ETKL PT+IT YP E SPLAR+ N +N +IT+RFE F
Sbjct: 382 LGK---------LQTIVFEETVETKLRQPTFITEYPAETSPLARR-NDDNPHITDRFEFF 431
Query: 354 IIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCG 413
I G E+ANGFSELNDP +Q+ RF+ Q+ K+ + E + +YD +++ ALEYG+PP +G G
Sbjct: 432 IGGRELANGFSELNDPIDQAERFQAQVAEKDAGDDE-AMHYDAEFVEALEYGLPPTAGEG 490
Query: 414 IGVDRLIMLLTNSKNIRDVILFPHLR 439
IG+DRL+ML ++ +IRDVILFPH+R
Sbjct: 491 IGIDRLVMLFADAPSIRDVILFPHMR 516
>gi|258620334|ref|ZP_05715372.1| lysyl-tRNA synthetase [Vibrio mimicus VM573]
gi|424809638|ref|ZP_18235015.1| lysyl-tRNA synthetase [Vibrio mimicus SX-4]
gi|258587213|gb|EEW11924.1| lysyl-tRNA synthetase [Vibrio mimicus VM573]
gi|342323126|gb|EGU18912.1| lysyl-tRNA synthetase [Vibrio mimicus SX-4]
Length = 512
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/443 (49%), Positives = 311/443 (70%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM K F+++Q+TSG +IQ Y S E+ + L ++ DIGDIIG +G L K+
Sbjct: 80 RVMAKRGPFLVIQETSG-----RIQAYASKEV-QQELKDKYQGLDIGDIIGVQGALHKSG 133
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE++YR RY+DLI+NEN+R F R++++S
Sbjct: 134 KGDLYVNMEQFQLLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNENSRNAFVVRSKVMS 193
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM FMEVETP++H PGGA A+PFITHHN+L+M M+LRIAPELYLKRL++GGF
Sbjct: 194 AIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPMYLRIAPELYLKRLVVGGF 253
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
+++FEIN+NFRNEG+SPRHNPEFTM+EFY AY +Y LM TE+++ + ++ +G+T +
Sbjct: 254 DRVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLGSTSMP 313
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y ++F + ++++ +AIK Y P + +I D+QN+ + S K ++
Sbjct: 314 YGEHTVEFGGKYARMSMFDAIKHYNPNHAQIQSLTEEDIQNRDLMVSIAKSVHVDVEPFW 373
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E KL PT+IT YP +ISPLAR+S+ +N T+RFE FI G
Sbjct: 374 TCGQLLEEI-----FGETAEPKLMQPTFITGYPADISPLARRSD-DNPFFTDRFEFFIGG 427
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND E+Q RFK Q++ K + E + +YD DYI ALE+G+PP +G GIG+
Sbjct: 428 REVANGFSELNDAEDQDARFKAQVEAKESGDDE-AMFYDADYITALEHGLPPTAGQGIGI 486
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL+MLLTN+ IRDVILFP +R
Sbjct: 487 DRLVMLLTNTHTIRDVILFPAMR 509
>gi|398976791|ref|ZP_10686601.1| lysyl-tRNA synthetase (class II) [Pseudomonas sp. GM25]
gi|398138674|gb|EJM27688.1| lysyl-tRNA synthetase (class II) [Pseudomonas sp. GM25]
Length = 500
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 219/441 (49%), Positives = 314/441 (71%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + + K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLSEETLAAVKTWDMGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L ++++S++L+TKSLRPLP+K L++ E +YR RY+DLI+NE+ R+ F+ R+
Sbjct: 124 ARSGKGDLYVEMTSVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEDVRQTFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ K DF+EVETP+L PGGA AKPF THHN+L+M+MFLRIAPELYLKRL+
Sbjct: 184 QVIAHIRSFLMKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGS 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DL + ++ KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTADDLNDIDKARAIAKKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+ N +N N+T+RFELFI G E
Sbjct: 359 GFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDDNPNVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFMAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 477 LVMLLTNSPSIRDVILFPHMR 497
>gi|254447176|ref|ZP_05060643.1| lysyl-tRNA synthetase [gamma proteobacterium HTCC5015]
gi|198263315|gb|EDY87593.1| lysyl-tRNA synthetase [gamma proteobacterium HTCC5015]
Length = 500
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 213/437 (48%), Positives = 310/437 (70%), Gaps = 12/437 (2%)
Query: 5 VMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTNTG 64
V+ + +F ++QD SG +IQ+Y+ + + K+ + K +D+GDI+G +GTL ++ G
Sbjct: 76 VLDRNAFKVIQDVSG-----RIQVYVDRKTLPKDKLAEIKAWDLGDIVGVEGTLQRSGKG 130
Query: 65 ELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIISSI 124
+L + + +L+TKSLRPLP+K + LS+ E +YR RY+DLI+NE +RKVF+ R+QII I
Sbjct: 131 DLYVSMERAELLTKSLRPLPDKHKGLSDTEQRYRQRYVDLIVNEESRKVFRLRSQIIQYI 190
Query: 125 RHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGFNK 184
R +++ DF EVETP++ PGGA A+PF+THHN+L+M ++LRIAPELYLKRL++GGF +
Sbjct: 191 RRYLDGRDFQEVETPMMQVIPGGATARPFVTHHNALDMDLYLRIAPELYLKRLVVGGFER 250
Query: 185 IFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKIDYQ 244
++EIN+NFRNEG+S RHNPEFTM+EFY AY +Y LM TE M++ I D IG+T I+ +
Sbjct: 251 VYEINRNFRNEGLSTRHNPEFTMLEFYQAYADYHDLMDLTESMLRGIAEDVIGSTTIEAE 310
Query: 245 GRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNNLKKD 304
G DF K+F ++T+ E+I + +E +L + +S +++ L
Sbjct: 311 GEQYDFEKAFARMTVKESILHFNRDISEAELDDLDSARSLAERLGIPLKDSYGLGK---- 366
Query: 305 ILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIANGFS 364
+Q+ +FE+T E +L PT+IT YPTE+SPLAR+ + N +TERFE F+ G E+ANGFS
Sbjct: 367 -VQIEIFEKTVEHRLMQPTFITEYPTEVSPLARRLDA-NPFVTERFEFFVGGREVANGFS 424
Query: 365 ELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLIMLLT 424
ELND E+Q+ RFK Q+ K+ + E + +YD DYI ALEYG+PP +G GIG+DRL+ML T
Sbjct: 425 ELNDAEDQAERFKAQVAEKDAGDDE-AMHYDADYIRALEYGLPPTAGEGIGIDRLVMLFT 483
Query: 425 NSKNIRDVILFPHLRNE 441
+S +IRDV+LFPH+R E
Sbjct: 484 DSASIRDVLLFPHMRPE 500
>gi|444377660|ref|ZP_21176869.1| Lysyl-tRNA synthetase (class II) [Enterovibrio sp. AK16]
gi|443678244|gb|ELT84916.1| Lysyl-tRNA synthetase (class II) [Enterovibrio sp. AK16]
Length = 504
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 224/446 (50%), Positives = 310/446 (69%), Gaps = 20/446 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM K F+ LQD SG +IQ Y + ++ L ++ DIGDIIG KG L K+
Sbjct: 68 RVMAKRGPFLALQDVSG-----RIQAYAAKDV-QNVLKEQYQGLDIGDIIGVKGALHKSG 121
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE++YR RY+DLI+NE++R FK R+++IS
Sbjct: 122 KGDLYVNMEEYQLLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSRNAFKVRSKLIS 181
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR +ME DFMEVETP++ PGGA A+PFITHHN+L+ +MFLRIAPELYLKRL++GGF
Sbjct: 182 AIRRYMESKDFMEVETPMMQVIPGGASARPFITHHNALDQEMFLRIAPELYLKRLVVGGF 241
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
++FEIN+NFRNEG+SPRHNPEFTMIEFY AY +Y L+ TE M++ + ++ +G T +
Sbjct: 242 ERVFEINRNFRNEGLSPRHNPEFTMIEFYMAYADYNDLIDLTEDMLRTVAVEVLGETSMP 301
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y ++F + ++T++EAIK Y P++ +I D+Q++ L + K + +
Sbjct: 302 YGDYTVEFGGKYARMTMLEAIKHYNPEHADIQALTVEDVQDREKLVAIAKSLEIYVEKFW 361
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E KL PT+IT YP +ISPLAR+S+ +N T+RFE FI G
Sbjct: 362 TCGQLLEEI-----FGETAEPKLIQPTFITGYPADISPLARRSD-DNPFFTDRFEFFIGG 415
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND E+Q RFK Q+D K+ + E + +YD DYI ALE+G+PP +G GIG+
Sbjct: 416 REVANGFSELNDAEDQDARFKAQVDAKDAGDDE-AMFYDADYITALEHGLPPTAGQGIGI 474
Query: 417 DRLIMLLTNSKNIRDVILFPHLRNEN 442
DRL ML TN+ IRDVILFP +R +N
Sbjct: 475 DRLAMLFTNTHTIRDVILFPAMRPQN 500
>gi|15640683|ref|NP_230313.1| lysyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121587863|ref|ZP_01677620.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae 2740-80]
gi|121728407|ref|ZP_01681435.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae V52]
gi|147674731|ref|YP_001216158.1| lysyl-tRNA synthetase [Vibrio cholerae O395]
gi|153216961|ref|ZP_01950725.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae 1587]
gi|153801992|ref|ZP_01956578.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae MZO-3]
gi|153818684|ref|ZP_01971351.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae NCTC 8457]
gi|153826526|ref|ZP_01979193.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae MZO-2]
gi|153829165|ref|ZP_01981832.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae 623-39]
gi|227080845|ref|YP_002809396.1| lysyl-tRNA synthetase [Vibrio cholerae M66-2]
gi|227117039|ref|YP_002818935.1| heat inducible lysyl-tRNA synthetase [Vibrio cholerae O395]
gi|229505714|ref|ZP_04395224.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae BX 330286]
gi|229508712|ref|ZP_04398205.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae B33]
gi|229512925|ref|ZP_04402392.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae TMA 21]
gi|229519539|ref|ZP_04408982.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae RC9]
gi|229520955|ref|ZP_04410377.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae TM 11079-80]
gi|229530471|ref|ZP_04419859.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae 12129(1)]
gi|229608733|ref|YP_002879381.1| lysyl-tRNA synthetase [Vibrio cholerae MJ-1236]
gi|254226528|ref|ZP_04920111.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae V51]
gi|254291903|ref|ZP_04962685.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae AM-19226]
gi|254850995|ref|ZP_05240345.1| lysyl-tRNA synthetase [Vibrio cholerae MO10]
gi|9655101|gb|AAF93829.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae O1 biovar El
Tor str. N16961]
gi|121547899|gb|EAX57983.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae 2740-80]
gi|121629341|gb|EAX61773.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae V52]
gi|124114026|gb|EAY32846.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae 1587]
gi|124122451|gb|EAY41194.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae MZO-3]
gi|125620932|gb|EAZ49283.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae V51]
gi|126510764|gb|EAZ73358.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae NCTC 8457]
gi|146316614|gb|ABQ21153.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae O395]
gi|148875354|gb|EDL73489.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae 623-39]
gi|149739706|gb|EDM53913.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae MZO-2]
gi|150422189|gb|EDN14154.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae AM-19226]
gi|227008733|gb|ACP04945.1| heat inducible lysyl-tRNA synthetase [Vibrio cholerae M66-2]
gi|227012489|gb|ACP08699.1| heat inducible lysyl-tRNA synthetase [Vibrio cholerae O395]
gi|229332244|gb|EEN97732.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae 12129(1)]
gi|229342188|gb|EEO07184.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae TM 11079-80]
gi|229344228|gb|EEO09203.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae RC9]
gi|229350174|gb|EEO15127.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae TMA 21]
gi|229354236|gb|EEO19166.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae B33]
gi|229357937|gb|EEO22854.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae BX 330286]
gi|229371388|gb|ACQ61811.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae MJ-1236]
gi|254846700|gb|EET25114.1| lysyl-tRNA synthetase [Vibrio cholerae MO10]
Length = 512
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/443 (49%), Positives = 311/443 (70%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM K F+++Q+TSG +IQ Y S E+ + L ++ DIGDIIG +G L K+
Sbjct: 80 RVMAKRGPFLVIQETSG-----RIQAYASKEV-QQELKDKYQGLDIGDIIGVQGALHKSG 133
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE++YR RY+DLI+NEN+R F R++++S
Sbjct: 134 KGDLYVNMEQFQLLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNENSRNAFIVRSKVMS 193
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM FMEVETP++H PGGA A+PFITHHN+L+M M+LRIAPELYLKRL++GGF
Sbjct: 194 AIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPMYLRIAPELYLKRLVVGGF 253
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
+++FEIN+NFRNEG+SPRHNPEFTM+EFY AY +Y LM TE+++ + ++ +G+T +
Sbjct: 254 DRVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLGSTSMP 313
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y ++F + ++++ +AIK Y P + +I D+QN+ + S K ++
Sbjct: 314 YGEHTVEFGGKYARMSMFDAIKHYNPNHAQIQALTEEDIQNRDLMVSIAKSVHVDVEPFW 373
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E KL PT+IT YP +ISPLAR+S+ +N T+RFE FI G
Sbjct: 374 TCGQLLEEI-----FGETAEPKLMQPTFITGYPADISPLARRSD-DNPFFTDRFEFFIGG 427
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND E+Q RFK Q++ K + E + +YD DYI ALE+G+PP +G GIG+
Sbjct: 428 REVANGFSELNDAEDQDARFKAQVEAKESGDDE-AMFYDADYITALEHGLPPTAGQGIGI 486
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL+MLLTN+ IRDVILFP +R
Sbjct: 487 DRLVMLLTNTHTIRDVILFPAMR 509
>gi|398965040|ref|ZP_10680706.1| lysyl-tRNA synthetase (class II) [Pseudomonas sp. GM30]
gi|398147494|gb|EJM36198.1| lysyl-tRNA synthetase (class II) [Pseudomonas sp. GM30]
Length = 500
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 219/441 (49%), Positives = 313/441 (70%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + ++ K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLSEDTLAAVKTWDMGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L ++++ ++L+TKSLRPLP+K L++ E +YR RY+DLI+NE R+ F+ R+
Sbjct: 124 ARSGKGDLYVEMTHVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEEVRQTFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ K DF+EVETP+L PGGA AKPF THHN+L+M+MFLRIAPELYLKRL+
Sbjct: 184 QVIAHIRSFLMKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGS 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DL + ++ KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFARLSVFDSILKYNPELTADDLNDIDKARAIAKKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+ N EN N+T+RFELFI G E
Sbjct: 359 GFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDENPNVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFMAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 477 LVMLLTNSPSIRDVILFPHMR 497
>gi|307245669|ref|ZP_07527755.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
str. 4074]
gi|306853371|gb|EFM85590.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
str. 4074]
Length = 500
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 225/447 (50%), Positives = 313/447 (70%), Gaps = 25/447 (5%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
MLKRVMGK SF +QD SG +IQLY++ + + + +Y D +D+GDI+G GTLF
Sbjct: 71 MLKRVMGKASFFTIQDVSG-----QIQLYVARDNLAEGVYADKVSMWDLGDIVGVAGTLF 125
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGEL+++ S ++L+TKSLRPLPNK Q L++QE +YR RY+DLI NE +R+ F R++
Sbjct: 126 KTKTGELTVRCSEVELLTKSLRPLPNKVQGLTDQETRYRQRYLDLISNEESRRTFMIRSK 185
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
++S IR F + DF+EVETP+L PGGA AKPF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 186 VVSGIRQFFLEKDFIEVETPMLQVIPGGAAAKPFVTHHNALDVDMYLRIAPELYLKRLVV 245
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTMIE+Y AY +Y LM TE++++K+ +D +GTT
Sbjct: 246 GGFERVFELNRNFRNEGVSVRHNPEFTMIEYYQAYADYHDLMDNTEELLRKLAIDILGTT 305
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKS-ELKK-----INPKFN 293
+ Y + DF K FE++T+ +AI KY DL + F KS E+ K I +
Sbjct: 306 TVPYGEYVFDFGKPFERITMHDAIVKYGNGITREDLDS--FEKSVEIAKGLGIEIQKSWG 363
Query: 294 QKKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELF 353
++N +FEE E +L PT++ +P EISPLAR+ N EN +T+RFELF
Sbjct: 364 LGSVVN---------AIFEEVAEHQLIQPTFLMAHPAEISPLARR-NDENPEVTDRFELF 413
Query: 354 IIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCG 413
I G EI NGFSELND E+Q+ RF Q+ K+ + E + + D D++ ALE+G+PP +G G
Sbjct: 414 IGGREIGNGFSELNDAEDQAERFDAQVAAKDAGDDE-AMFKDEDFVVALEHGLPPTAGEG 472
Query: 414 IGVDRLIMLLTNSKNIRDVILFPHLRN 440
+G+DRL M+ N+ +IRDVILFP +R
Sbjct: 473 LGIDRLAMIFANAPSIRDVILFPAMRQ 499
>gi|398912327|ref|ZP_10655922.1| lysyl-tRNA synthetase (class II) [Pseudomonas sp. GM49]
gi|398182411|gb|EJM69929.1| lysyl-tRNA synthetase (class II) [Pseudomonas sp. GM49]
Length = 521
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/441 (49%), Positives = 313/441 (70%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + + K +D+GDII A+GTL
Sbjct: 90 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLSEETLAAVKTWDMGDIIAAEGTL 144
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L ++++S++L+TKSLRPLP+K L++ E +YR RY+DLI+NE+ R+ F+ R+
Sbjct: 145 ARSGKGDLYVEMTSVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEDVRQTFRVRS 204
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ K DF+EVETP+L PGGA AKPF THHN+L+M MFLRIAPELYLKRL+
Sbjct: 205 QVIAHIRSFLMKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMGMFLRIAPELYLKRLV 264
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 265 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGS 324
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DL + ++ KK K+L
Sbjct: 325 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTADDLNDIDKARAIAKKAG-----AKVL 379
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+ N EN N+T+RFELFI G E
Sbjct: 380 GFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDENPNVTDRFELFIGGRE 438
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 439 IANAYSELNDAEDQAERFMAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 497
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 498 LVMLLTNSPSIRDVILFPHMR 518
>gi|422651021|ref|ZP_16713820.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. actinidiae str.
M302091]
gi|330964103|gb|EGH64363.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. actinidiae str.
M302091]
Length = 500
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 216/441 (48%), Positives = 317/441 (71%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + + + K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLPEETLAEVKTWDLGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L ++++S++L+TKSLRPLP+K L++ E +YR RY+DLI+NE+ R+ F+ R+
Sbjct: 124 ARSGKGDLYVEMTSVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEDVRETFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
++I+ IR F+ + DF+EVETP+L PGGA AKPF THHN+L+++MFLRIAPELYLKRL+
Sbjct: 184 RVIAHIRSFLMQRDFLEVETPMLQTIPGGAAAKPFETHHNALDLEMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGS 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DLQ+ ++ KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTAADLQDVDKARAIAKKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+ N +N N+T+RFELFI G E
Sbjct: 359 GFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDDNPNVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF+ Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFQAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLT+S +IRDVILFPH+R
Sbjct: 477 LVMLLTDSPSIRDVILFPHMR 497
>gi|262172259|ref|ZP_06039937.1| lysyl-tRNA synthetase (class II) [Vibrio mimicus MB-451]
gi|261893335|gb|EEY39321.1| lysyl-tRNA synthetase (class II) [Vibrio mimicus MB-451]
Length = 510
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/443 (49%), Positives = 311/443 (70%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM K F+++Q+TSG +IQ Y S E+ + L ++ DIGDIIG +G L K+
Sbjct: 78 RVMAKRGPFLVIQETSG-----RIQAYASKEV-QQELKDKYQGLDIGDIIGVQGALHKSG 131
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE++YR RY+DLI+NEN+R F R++++S
Sbjct: 132 KGDLYVNMEQFQLLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNENSRNAFVVRSKVMS 191
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM FMEVETP++H PGGA A+PFITHHN+L+M M+LRIAPELYLKRL++GGF
Sbjct: 192 AIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPMYLRIAPELYLKRLVVGGF 251
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
+++FEIN+NFRNEG+SPRHNPEFTM+EFY AY +Y LM TE+++ + ++ +G+T +
Sbjct: 252 DRVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLGSTSMP 311
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y ++F + ++++ +AIK Y P + +I D+QN+ + S K ++
Sbjct: 312 YGEHTVEFGGKYARMSMFDAIKHYNPNHAQIQALTEEDIQNRDLMVSIAKSVHVDVEPFW 371
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E KL PT+IT YP +ISPLAR+S+ +N T+RFE FI G
Sbjct: 372 TCGQLLEEI-----FGETAEPKLMQPTFITGYPADISPLARRSD-DNPFFTDRFEFFIGG 425
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND E+Q RFK Q++ K + E + +YD DYI ALE+G+PP +G GIG+
Sbjct: 426 REVANGFSELNDAEDQDARFKAQVEAKESGDDE-AMFYDADYITALEHGLPPTAGQGIGI 484
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL+MLLTN+ IRDVILFP +R
Sbjct: 485 DRLVMLLTNTHTIRDVILFPAMR 507
>gi|359785868|ref|ZP_09289014.1| lysyl-tRNA synthetase [Halomonas sp. GFAJ-1]
gi|359296818|gb|EHK61060.1| lysyl-tRNA synthetase [Halomonas sp. GFAJ-1]
Length = 503
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 222/440 (50%), Positives = 304/440 (69%), Gaps = 15/440 (3%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM K FI++QD +G +IQLY+ + + +++ D K +DIGDI+ A+G + K+
Sbjct: 75 RVMRKRGPFIVIQDVAG-----QIQLYVDKKGLPEDVLEDIKGWDIGDIVAARGPVHKSG 129
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TKSLRPLP+KF L++QE +YR RY+DLI+N +RKVF+ R +IS
Sbjct: 130 KGDLYVMMKETQLLTKSLRPLPDKFHGLTDQEARYRQRYVDLIMNPQSRKVFETRAAVIS 189
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
S+R F E FMEVETP+L PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++GGF
Sbjct: 190 SMRRFFEARGFMEVETPMLQPIPGGAAARPFITHHNALDIDMYLRIAPELYLKRLVVGGF 249
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y L+ TE M++ + +GTT +
Sbjct: 250 EKVFEINRNFRNEGLSTRHNPEFTMVEFYWAYADYRDLLDMTEAMLRTAAEEVLGTTTLS 309
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNNLK 302
YQG DF + F +LT+ +AI + DL ++ +K+ K + L ++
Sbjct: 310 YQGASYDFGQPFHRLTLRQAILDHGDGITNADLDTLEAARTVAEKLGIKVKESWGLGKIQ 369
Query: 303 KDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIANG 362
+I FEE E KL PT+IT YP E+SPLAR+ N N +T+RFE F+ G EIANG
Sbjct: 370 TEI-----FEEVAEHKLDQPTFITEYPAEVSPLARR-NDANPFVTDRFEFFVGGREIANG 423
Query: 363 FSELNDPEEQSVRFKNQIDLKNEINGELSS-YYDTDYIHALEYGMPPASGCGIGVDRLIM 421
FSELND E+Q+ RF+ Q K+ G+L + YYD DY+ ALEYGMPP +G GIG+DRL+M
Sbjct: 424 FSELNDAEDQAERFREQAAEKD--AGDLEAMYYDADYVRALEYGMPPTAGEGIGIDRLVM 481
Query: 422 LLTNSKNIRDVILFPHLRNE 441
L T+S +IRDV+LFP +R E
Sbjct: 482 LFTDSPSIRDVLLFPAMRPE 501
>gi|398865443|ref|ZP_10620960.1| lysyl-tRNA synthetase (class II) [Pseudomonas sp. GM78]
gi|398243220|gb|EJN28814.1| lysyl-tRNA synthetase (class II) [Pseudomonas sp. GM78]
Length = 500
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 219/441 (49%), Positives = 315/441 (71%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + ++ K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLSEDTLAAVKTWDMGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L +++++++L+TKSLRPLP+K L++ E +YR RY+DLI+NE+ R+ F+ R+
Sbjct: 124 ARSGKGDLYVEMTNVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEDVRQTFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ K DF+EVETP+L PGGA AKPF THHN+L+M+MFLRIAPELYLKRL+
Sbjct: 184 QVIAHIRSFLMKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGS 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ + DL + + KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPELSADDLNDIDKARDIAKKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+ N EN N+T+RFELFI G E
Sbjct: 359 GFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDENPNVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFMAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 477 LVMLLTNSPSIRDVILFPHMR 497
>gi|395794092|ref|ZP_10473427.1| lysyl-tRNA ligase [Pseudomonas sp. Ag1]
gi|395341767|gb|EJF73573.1| lysyl-tRNA ligase [Pseudomonas sp. Ag1]
Length = 500
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 219/441 (49%), Positives = 313/441 (70%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + + K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLSEETLASVKTWDMGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L ++++S++L+TKSLRPLP+K L++ E +YR RY+DLI+NE R+ F+ R+
Sbjct: 124 ARSGKGDLYVEMTSVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEEVRQTFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ K DF+EVETP+L PGGA AKPF THHN+L+M+MFLRIAPELYLKRL+
Sbjct: 184 QVIAHIRSFLMKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGS 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DL + ++ KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTADDLNDIDKARAIAKKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+ N +N N+T+RFELFI G E
Sbjct: 359 GFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDDNPNVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFMAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 477 LVMLLTNSPSIRDVILFPHMR 497
>gi|404492860|ref|YP_006716966.1| lysyl-tRNA ligase [Pelobacter carbinolicus DSM 2380]
gi|77544935|gb|ABA88497.1| lysyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
Length = 494
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/441 (49%), Positives = 311/441 (70%), Gaps = 13/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M +R GK +FI +QD +G++Q+++ + +G+ + F+ DIGDI+G G F+
Sbjct: 65 MARRDFGKAAFIQIQD-----RHGRLQVFVRRDNVGEEAFQMFRKLDIGDIVGVTGKPFR 119
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T T ELS++ SL+L+TKSL+PLP K+ L++ E++YR RY+DLI+N + +++FKKR+QI
Sbjct: 120 TKTNELSLRADSLRLLTKSLQPLPEKWHGLTDVEMRYRQRYLDLIVNPDVQEIFKKRSQI 179
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+S IR+FM NDF+EVETP++ GGA A+PF+THHN+L M +FLRIAPELYLKRL++G
Sbjct: 180 VSLIRNFMVDNDFLEVETPMMQPVAGGATARPFMTHHNTLKMDLFLRIAPELYLKRLVVG 239
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEGIS +HNPEFTM+EFY AY NY LM FTEK+I + +G+
Sbjct: 240 GFERVFEINRNFRNEGISIQHNPEFTMMEFYQAYANYEDLMDFTEKLICHVAEKVVGSLT 299
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
Y GR +D + +++LT+ EAI KY E+ L++K + + + F+ +
Sbjct: 300 FTYGGREVDLTAPWDRLTVKEAILKYGDVEPEV-LEDKDQCLAYARSLGLDFD-----DT 353
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
+ L LF+E E KLWNPT+IT YPTE+SPL+RK N +N + +RFELF++G E+A
Sbjct: 354 IGYGKLLTELFDEVAEPKLWNPTFITQYPTEVSPLSRK-NEDNPEVVDRFELFVVGRELA 412
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
N FSELNDP +Q RF Q+ L+ E + + D DYI ALEYG+PP +G GIG+DRL+
Sbjct: 413 NAFSELNDPIDQKDRFAKQL-LEKEAGDDEAHAMDEDYIRALEYGLPPTAGEGIGIDRLV 471
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT++ +IR+VILFP LR E
Sbjct: 472 MLLTDAASIREVILFPQLRPE 492
>gi|27363989|ref|NP_759517.1| lysyl-tRNA synthetase [Vibrio vulnificus CMCP6]
gi|320157368|ref|YP_004189747.1| lysyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
gi|31340442|sp|Q8DEQ9.1|SYK_VIBVU RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|27360106|gb|AAO09044.1| lysyl-tRNA synthetase [Vibrio vulnificus CMCP6]
gi|319932680|gb|ADV87544.1| lysyl-tRNA synthetase (class II) [Vibrio vulnificus MO6-24/O]
Length = 510
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 219/443 (49%), Positives = 314/443 (70%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM K F+++Q+TSG +IQ Y +++ + K L ++ DIGDIIG KG L K+
Sbjct: 78 RVMAKRGPFLVIQETSG-----RIQAY-ADKDVQKVLKDKYQGLDIGDIIGVKGALHKSG 131
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE++YR RY+DLI+NE++R F R++++S
Sbjct: 132 KGDLYVNMEEYELLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSRNAFVVRSKVMS 191
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM FMEVETP++H PGGA A+PF+THHN+L+M M+LRIAPELYLKRL++GGF
Sbjct: 192 AIRNFMISKQFMEVETPMMHVIPGGASARPFVTHHNALDMPMYLRIAPELYLKRLVVGGF 251
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
+++FEIN+NFRNEG+SPRHNPEFTM+EFY AY +Y LM TE+++ + ++ +G+T +
Sbjct: 252 DRVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLGSTSMP 311
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y ++F ++ ++++ EAIK Y P + +I D+QN+ + S K ++ +
Sbjct: 312 YGEHTVEFGGTYTRMSMFEAIKHYNPDHAQIQALTEEDIQNRDLMVSIAKSVHVEVEPFW 371
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E KL PT+IT YP +ISPLAR+S+ +N T+RFE FI G
Sbjct: 372 TCGQLLEEI-----FGETAEPKLMQPTFITGYPADISPLARRSD-DNPFFTDRFEFFIGG 425
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND E+Q RFK Q++ K + E + +YD DYI ALE+G+PP +G GIG+
Sbjct: 426 REVANGFSELNDAEDQDARFKAQVEAKESGDDE-AMFYDADYITALEHGLPPTAGQGIGI 484
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL+MLLTN+ IRDVILFP +R
Sbjct: 485 DRLVMLLTNTHTIRDVILFPAMR 507
>gi|116051697|ref|YP_789464.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
gi|296387793|ref|ZP_06877268.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa PAb1]
gi|313109106|ref|ZP_07795078.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
gi|355639900|ref|ZP_09051445.1| lysyl-tRNA synthetase [Pseudomonas sp. 2_1_26]
gi|386067735|ref|YP_005983039.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa NCGM2.S1]
gi|416878071|ref|ZP_11920198.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa 152504]
gi|421166064|ref|ZP_15624334.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa ATCC 700888]
gi|421173061|ref|ZP_15630816.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa CI27]
gi|122260840|sp|Q02RH2.1|SYK_PSEAB RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|115586918|gb|ABJ12933.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
gi|310881580|gb|EFQ40174.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
gi|334838756|gb|EGM17464.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa 152504]
gi|348036294|dbj|BAK91654.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa NCGM2.S1]
gi|354831606|gb|EHF15616.1| lysyl-tRNA synthetase [Pseudomonas sp. 2_1_26]
gi|404536732|gb|EKA46368.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa CI27]
gi|404539211|gb|EKA48708.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa ATCC 700888]
Length = 501
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 219/441 (49%), Positives = 314/441 (71%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SFI+LQD+S ++Q+Y++ + + + + K +D+GDIIGA+G L
Sbjct: 70 KVAGRIMLNRGSFIVLQDSSE-----RLQVYVNRKTLPEETLAEIKTWDLGDIIGAEGVL 124
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L + ++S++L+TKSLRPLP+K L++ E +YR RY+DL++NE TR F+ R+
Sbjct: 125 ARSGKGDLYVDMTSVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLMVNEETRHTFRVRS 184
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ + F+EVETP+L PGGA AKPF THHN+L+M MFLRIAPELYLKRL+
Sbjct: 185 QVIAHIRRFLSERGFLEVETPMLQTIPGGAAAKPFETHHNALDMAMFLRIAPELYLKRLV 244
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +GT
Sbjct: 245 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQAVLGT 304
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ + DL + ++ KK K+L
Sbjct: 305 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPEISAADLNDVEKARAIAKKAG-----AKVL 359
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
+ LQ+M+FEE E KL P +IT YP E+SPLAR+ N E+ ++T+RFELFI G E
Sbjct: 360 GHEGLGKLQVMIFEELVEHKLEQPHFITRYPFEVSPLARR-NDEDPSVTDRFELFIGGRE 418
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + +YD D+I+ALEYGMPP +G GIG+DR
Sbjct: 419 IANAYSELNDAEDQAERFMLQVKEKDAGDDE-AMHYDADFINALEYGMPPTAGEGIGIDR 477
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 478 LVMLLTNSPSIRDVILFPHMR 498
>gi|77457287|ref|YP_346792.1| lysyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
gi|123605817|sp|Q3KHF3.1|SYK_PSEPF RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|77381290|gb|ABA72803.1| lysyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
Length = 499
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 219/441 (49%), Positives = 314/441 (71%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + + K +D+GDII A+GTL
Sbjct: 68 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLSEETLAAVKTWDMGDIIAAEGTL 122
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L ++++S++L+TKSLRPLP+K L++ E +YR RY+DLI+NE+ R+ F+ R+
Sbjct: 123 ARSGKGDLYVEMTSVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEDVRQTFRVRS 182
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ K DF+EVETP+L PGGA AKPF THHN+L+M+MFLRIAPELYLKRL+
Sbjct: 183 QVIAHIRSFLMKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMFLRIAPELYLKRLV 242
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 243 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGS 302
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DL + ++ KK K+L
Sbjct: 303 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTADDLNDIDKARAIAKKAG-----AKVL 357
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+ N +N N+T+RFELFI G E
Sbjct: 358 GFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDDNPNVTDRFELFIGGRE 416
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 417 IANAYSELNDAEDQAERFMAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 475
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 476 LVMLLTNSPSIRDVILFPHMR 496
>gi|15598896|ref|NP_252390.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
gi|418586065|ref|ZP_13150111.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa MPAO1/P1]
gi|421518243|ref|ZP_15964917.1| lysyl-tRNA ligase [Pseudomonas aeruginosa PAO579]
gi|38258401|sp|Q9HXU0.1|SYK_PSEAE RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|9949865|gb|AAG07088.1|AE004789_8 lysyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
gi|375043739|gb|EHS36355.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa MPAO1/P1]
gi|404347725|gb|EJZ74074.1| lysyl-tRNA ligase [Pseudomonas aeruginosa PAO579]
Length = 501
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 219/441 (49%), Positives = 313/441 (70%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SFI+LQD+S ++Q+Y++ + + + + K +D+GDIIGA+G L
Sbjct: 70 KVAGRIMLNRGSFIVLQDSSE-----RLQVYVNRKTLPEETLAEIKTWDLGDIIGAEGVL 124
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L + ++S++L+TKSLRPLP+K L++ E +YR RY+DL++NE TR F+ R+
Sbjct: 125 ARSGKGDLYVDMTSVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLMVNEETRHTFRVRS 184
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ + F+EVETP+L PGGA AKPF THHN+L+M MFLRIAPELYLKRL+
Sbjct: 185 QVIAHIRRFLSERGFLEVETPMLQTIPGGAAAKPFETHHNALDMAMFLRIAPELYLKRLV 244
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +GT
Sbjct: 245 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQSVLGT 304
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DL + ++ KK K+L
Sbjct: 305 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPEITAADLNDVEKARAIAKKAG-----AKVL 359
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
+ LQ+M+FEE E KL P +IT YP E+SPLAR+ N E+ ++T+RFELFI G E
Sbjct: 360 GHEGLGKLQVMIFEELVEHKLEQPHFITRYPFEVSPLARR-NDEDPSVTDRFELFIGGRE 418
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + +YD D+I+ALEYGMPP +G GIG+DR
Sbjct: 419 IANAYSELNDAEDQAERFMLQVKEKDAGDDE-AMHYDADFINALEYGMPPTAGEGIGIDR 477
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 478 LVMLLTNSPSIRDVILFPHMR 498
>gi|421752615|ref|ZP_16189635.1| lysyl-tRNA ligase [Francisella tularensis subsp. tularensis AS_713]
gi|421754480|ref|ZP_16191451.1| lysyl-tRNA ligase [Francisella tularensis subsp. tularensis 831]
gi|421758209|ref|ZP_16195065.1| lysyl-tRNA ligase [Francisella tularensis subsp. tularensis
80700103]
gi|421760034|ref|ZP_16196857.1| lysyl-tRNA ligase [Francisella tularensis subsp. tularensis
70102010]
gi|409084504|gb|EKM84677.1| lysyl-tRNA ligase [Francisella tularensis subsp. tularensis 831]
gi|409084652|gb|EKM84821.1| lysyl-tRNA ligase [Francisella tularensis subsp. tularensis AS_713]
gi|409089625|gb|EKM89660.1| lysyl-tRNA ligase [Francisella tularensis subsp. tularensis
70102010]
gi|409090064|gb|EKM90088.1| lysyl-tRNA ligase [Francisella tularensis subsp. tularensis
80700103]
Length = 576
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/442 (50%), Positives = 314/442 (71%), Gaps = 13/442 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNY-DIGDIIGAKGTLF 59
+L+RVMGK SFI LQD +G +IQ+Y+ + Y FKN D+GDI+G GT+F
Sbjct: 147 VLRRVMGKASFITLQDYTG-----RIQVYLKKSDLPDGQYETFKNLCDLGDIVGITGTMF 201
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KTNTGELS++ + +++TK++RPLP+KF L++QE++YR RY+DLI NE R+VFK R++
Sbjct: 202 KTNTGELSVEANHFEILTKAIRPLPDKFHGLADQEMRYRQRYVDLITNEKAREVFKVRSK 261
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR++ ++ DFMEVETP++H GGA AKPF THHN+L+M ++LRIAPELYLKRL++
Sbjct: 262 VVNFIRNYFDRLDFMEVETPMMHVLQGGAAAKPFKTHHNALDMPLYLRIAPELYLKRLVV 321
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF +++EIN+NFRNEG+S RHNPEFTM+EFY AY +Y LM TE M+ K++ + IG+
Sbjct: 322 GGFERVYEINRNFRNEGVSSRHNPEFTMLEFYMAYADYNDLMDLTEDMLSKLVQEVIGSE 381
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++Y ++F +E+++++++I KY + DL K +K+ K L
Sbjct: 382 ILEYGEYKINFGGKYERISMVDSIVKYNDDITKEDLVTFESAKKIAEKLKIKVEAYHELG 441
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+L +I FEET E +L PT+IT+YP +SPLAR+ + N T+RFE FI E+
Sbjct: 442 HLINEI-----FEETVEHQLIQPTFITDYPAVVSPLARRQD-GNPEFTDRFEFFIGAREV 495
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
ANGFSELND E+Q+ RF+ Q++ + E + YD DYI ALEYGMPP +G GIG+DRL
Sbjct: 496 ANGFSELNDAEDQAERFRKQVEAAASGDDE-AMPYDKDYIRALEYGMPPTAGQGIGIDRL 554
Query: 420 IMLLTNSKNIRDVILFPHLRNE 441
+M LTNS++IRDVILFPH++ E
Sbjct: 555 VMYLTNSQSIRDVILFPHMKPE 576
>gi|388600487|ref|ZP_10158883.1| lysyl-tRNA ligase [Vibrio campbellii DS40M4]
Length = 510
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 218/443 (49%), Positives = 315/443 (71%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
R+M K F+++Q+TSG +IQ Y +++ + K L ++ DIGDIIG KG L K+
Sbjct: 78 RIMAKRGPFLVIQETSG-----RIQAY-ADKAVQKLLKEKYQGLDIGDIIGVKGALHKSG 131
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE++YR RY+DLI+NE++R+ F R++++S
Sbjct: 132 KGDLYVNMEEFELLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSRQAFVVRSKVMS 191
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM FMEVETP++H PGGA A+PFITHHN+L+M M+LRIAPELYLKRL++GGF
Sbjct: 192 AIRNFMITKQFMEVETPMMHVIPGGASARPFITHHNALDMPMYLRIAPELYLKRLVVGGF 251
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
+++FEIN+NFRNEG+SPRHNPEFTM+EFY AY +Y LM TE+++ + ++ +G+T +
Sbjct: 252 DRVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLGSTSMP 311
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y ++F ++ ++++ EAIK Y P + +I D+Q++ + S K ++ +
Sbjct: 312 YGDDTVEFGGTYTRMSMFEAIKHYNPDHAQIQALTEEDIQDRDLMVSIAKSVHVEVEPFW 371
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E KL PT+IT YP +ISPLAR+S+ +N T+RFE FI G
Sbjct: 372 TCGQLLEEI-----FGETAEPKLMQPTFITGYPADISPLARRSD-DNPFFTDRFEFFIGG 425
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND E+Q RFK Q++ K + E + +YD DYI ALE+G+PP +G GIG+
Sbjct: 426 REVANGFSELNDAEDQDARFKAQVEAKESGDDE-AMFYDADYITALEHGLPPTAGQGIGI 484
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL+MLLTN+ IRDVILFP +R
Sbjct: 485 DRLVMLLTNTHTIRDVILFPAMR 507
>gi|134302700|ref|YP_001122668.1| lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
WY96-3418]
gi|134050477|gb|ABO47548.1| Lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
WY96-3418]
Length = 560
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/442 (50%), Positives = 314/442 (71%), Gaps = 13/442 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNY-DIGDIIGAKGTLF 59
+L+RVMGK SFI LQD +G +IQ+Y+ + Y FKN D+GDI+G GT+F
Sbjct: 131 VLRRVMGKASFITLQDYTG-----RIQVYLKKSDLPDGQYETFKNLCDLGDIVGITGTMF 185
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KTNTGELS++ + +++TK++RPLP+KF L++QE++YR RY+DLI NE R+VFK R++
Sbjct: 186 KTNTGELSVEANHFEILTKAIRPLPDKFHGLADQEMRYRQRYVDLITNEKAREVFKVRSK 245
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR++ ++ DFMEVETP++H GGA AKPF THHN+L+M ++LRIAPELYLKRL++
Sbjct: 246 VVNFIRNYFDRLDFMEVETPMMHVLQGGAAAKPFKTHHNALDMPLYLRIAPELYLKRLVV 305
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF +++EIN+NFRNEG+S RHNPEFTM+EFY AY +Y LM TE M+ K++ + IG+
Sbjct: 306 GGFERVYEINRNFRNEGVSSRHNPEFTMLEFYMAYADYNDLMDLTEDMLSKLVQEVIGSE 365
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++Y ++F +E+++++++I KY + DL K +K+ K L
Sbjct: 366 ILEYGEYKINFGGKYERISMVDSIVKYNDDITKEDLVTFESAKKIAEKLKIKVEAYHELG 425
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+L +I FEET E +L PT+IT+YP +SPLAR+ + N T+RFE FI E+
Sbjct: 426 HLINEI-----FEETVEHQLIQPTFITDYPAVVSPLARRQD-GNPEFTDRFEFFIGAREV 479
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
ANGFSELND E+Q+ RF+ Q++ + E + YD DYI ALEYGMPP +G GIG+DRL
Sbjct: 480 ANGFSELNDAEDQAERFRKQVEAAASGDDE-AMPYDKDYIRALEYGMPPTAGQGIGIDRL 538
Query: 420 IMLLTNSKNIRDVILFPHLRNE 441
+M LTNS++IRDVILFPH++ E
Sbjct: 539 VMYLTNSQSIRDVILFPHMKPE 560
>gi|37678853|ref|NP_933462.1| lysyl-tRNA synthetase [Vibrio vulnificus YJ016]
gi|39932022|sp|Q7MNP6.1|SYK_VIBVY RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|37197594|dbj|BAC93433.1| lysyl-tRNA synthetase, class II [Vibrio vulnificus YJ016]
Length = 510
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/443 (49%), Positives = 314/443 (70%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM K F+++Q+TSG +IQ Y +++ + K L ++ DIGDIIG KG L K+
Sbjct: 78 RVMAKRGPFLVIQETSG-----RIQAY-ADKDVQKVLKDKYQGLDIGDIIGVKGALHKSG 131
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE++YR RY+DLI+NE++R F R++++S
Sbjct: 132 KGDLYVNMEEYELLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSRNAFVVRSKVMS 191
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM FMEVETP++H PGGA A+PFITHHN+L+M M+LRIAPELYLKRL++GGF
Sbjct: 192 AIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPMYLRIAPELYLKRLVVGGF 251
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
+++FEIN+NFRNEG+SPRHNPEFTM+EFY AY +Y LM TE+++ + ++ +G+T +
Sbjct: 252 DRVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLGSTSMP 311
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y ++F ++ ++++ EAIK Y P + +I D+QN+ + S K ++ +
Sbjct: 312 YGEHTVEFGGTYTRMSMFEAIKHYNPDHAQIQALTEEDIQNRDLMVSIAKSVHVEVEPFW 371
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E KL PT+IT YP +ISPLAR+S+ +N T+RFE FI G
Sbjct: 372 TCGQLLEEI-----FGETAEPKLMQPTFITGYPADISPLARRSD-DNPFFTDRFEFFIGG 425
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND E+Q RFK Q++ K + E + +YD DYI ALE+G+PP +G GIG+
Sbjct: 426 REVANGFSELNDAEDQDARFKAQVEAKESGDDE-AMFYDADYITALEHGLPPTAGQGIGI 484
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL+MLLTN+ IRDVILFP +R
Sbjct: 485 DRLVMLLTNTHTIRDVILFPAMR 507
>gi|424668614|ref|ZP_18105639.1| lysyl-tRNA synthetase [Stenotrophomonas maltophilia Ab55555]
gi|401068876|gb|EJP77400.1| lysyl-tRNA synthetase [Stenotrophomonas maltophilia Ab55555]
Length = 503
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 214/446 (47%), Positives = 307/446 (68%), Gaps = 21/446 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M KR+MGK SF +QD SG +IQL++ ++G + YT FK +D+GDII +G L +
Sbjct: 75 MAKRIMGKASFAQIQDESG-----RIQLFLQGAVLG-DAYTAFKGWDVGDIIAVEGGLTR 128
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+K S++L+TKSLRPLP+K+ L++ E +YR RY+DLI+ +R VF KR++I
Sbjct: 129 TKTGELSVKAESIRLLTKSLRPLPDKWHGLADVEQRYRQRYVDLIVTPESRAVFIKRSKI 188
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I ++R +++ DF+EVETP++H PGGA AKPF THHN+L++ ++LR+APELYLKRL +G
Sbjct: 189 IRAMRAWLDNRDFLEVETPMMHYIPGGAAAKPFTTHHNALDLDLYLRVAPELYLKRLTVG 248
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G +++EIN+NFRNEG+S RHNPEFTM+E Y AY Y +M TE +I+ + G T+
Sbjct: 249 GLERVYEINRNFRNEGVSTRHNPEFTMMELYEAYATYNEIMDLTEGVIRDVAKAVNGGTE 308
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKIN----PKFNQKK 296
+++ G +D +F + + EA++ + P+ + D ++ L +++N P + K
Sbjct: 309 VEWDGAKIDLGPAFRRWRMDEAVRHHNPEISAADCTDRDALLRHCERLNIRVKPSYGWGK 368
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
+L L +FE T E L PT+IT++P E+SPLAR +N + T+RFELF+ G
Sbjct: 369 LL---------LEIFEATVEHTLIQPTFITDHPVEVSPLAR-ANDNDPGYTDRFELFVNG 418
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELNDPE+Q+ RF+ Q+ K + E + +YD DYI ALEYGM P G GIGV
Sbjct: 419 KELANGFSELNDPEDQAQRFQAQVAAKEGGDDE-AMHYDADYIRALEYGMAPTGGLGIGV 477
Query: 417 DRLIMLLTNSKNIRDVILFPHLRNEN 442
DRL+MLLT S +IRDV+LFP++R E
Sbjct: 478 DRLVMLLTGSSSIRDVLLFPYMRPEQ 503
>gi|163803525|ref|ZP_02197394.1| lysyl-tRNA synthetase [Vibrio sp. AND4]
gi|159172660|gb|EDP57513.1| lysyl-tRNA synthetase [Vibrio sp. AND4]
Length = 510
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 219/446 (49%), Positives = 315/446 (70%), Gaps = 20/446 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
R+M K F+++Q+TSG +IQ Y +++ + K L ++ DIGDIIG KG L K+
Sbjct: 78 RIMAKRGPFLVIQETSG-----RIQAY-ADKAVQKVLKEKYQGLDIGDIIGVKGALHKSG 131
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE++YR RY+DLI+NE++R+ F R++++S
Sbjct: 132 KGDLYVNMEEFELLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSRQAFVVRSKVMS 191
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM FMEVETP++H PGGA A+PFITHHN+L+M M+LRIAPELYLKRL++GGF
Sbjct: 192 AIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPMYLRIAPELYLKRLVVGGF 251
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
+++FEIN+NFRNEG+SPRHNPEFTM+EFY AY +Y LM TE+++ I + +G+T +
Sbjct: 252 DRVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSIAQEVLGSTSMP 311
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y ++F ++ ++++ EAIK Y P + +I D+QN+ + S K ++ +
Sbjct: 312 YGDDTVEFGGTYTRMSMFEAIKHYNPDHAQIQALTEEDIQNRDLMVSIAKSVHVEVEPFW 371
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E KL PT+IT YP +ISPLAR+S+ +N T+RFE FI G
Sbjct: 372 TCGQLLEEI-----FGETAEPKLMQPTFITGYPADISPLARRSD-DNPFFTDRFEFFIGG 425
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND E+Q RFK Q++ K + E + +YD DYI ALE+G+PP +G GIG+
Sbjct: 426 REVANGFSELNDAEDQDARFKAQVEAKESGDDE-AMFYDADYITALEHGLPPTAGQGIGI 484
Query: 417 DRLIMLLTNSKNIRDVILFPHLRNEN 442
DRL+MLLT++ IRDVILFP +R +
Sbjct: 485 DRLVMLLTDTHTIRDVILFPAMRPQG 510
>gi|339486074|ref|YP_004700602.1| lysyl-tRNA synthetase [Pseudomonas putida S16]
gi|431801114|ref|YP_007228017.1| lysyl-tRNA ligase [Pseudomonas putida HB3267]
gi|338836917|gb|AEJ11722.1| lysyl-tRNA synthetase [Pseudomonas putida S16]
gi|430791879|gb|AGA72074.1| lysyl-tRNA ligase [Pseudomonas putida HB3267]
Length = 500
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 219/441 (49%), Positives = 312/441 (70%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + + K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLPEETLAAVKTWDLGDIISAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L +++++++L+TKSLRPLP+K L++ E +YR RY+DL++NE TR F+ R+
Sbjct: 124 ARSGKGDLYVEMTNVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLMVNEETRHTFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+IS IR F+ + DF+EVETP+L PGGA AKPF THHN+L+M MFLRIAPELYLKRL+
Sbjct: 184 QVISHIRKFLIERDFLEVETPMLQTIPGGAAAKPFETHHNALDMAMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +GT
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYRDNMDLTEELFRELAQLVLGT 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DLQ+ + KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFARLSVFDSILKYNPELTAADLQDVDRARDIAKKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
+ LQ+M+FEE E KL P +IT YP E+SPLAR+ N +N +T+RFELFI G E
Sbjct: 359 GHEGLGKLQVMIFEELVEHKLEQPHFITEYPFEVSPLARR-NDDNPAVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFLAQVAEKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 477 LVMLLTNSPSIRDVILFPHMR 497
>gi|421465752|ref|ZP_15914439.1| lysine--tRNA ligase [Acinetobacter radioresistens WC-A-157]
gi|400204019|gb|EJO35004.1| lysine--tRNA ligase [Acinetobacter radioresistens WC-A-157]
Length = 509
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 219/444 (49%), Positives = 321/444 (72%), Gaps = 20/444 (4%)
Query: 4 RVM-GKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM + SFI++QD +G +IQLY++ + + + K D+GDII +G + ++
Sbjct: 80 RVMLNRGSFIVIQDMTG-----RIQLYVARKELDEQTLASIKGLDLGDIIAVQGYIGRSG 134
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TKSLRPLP+KF L++ E+KYR RY+DLI+NE TRK F+ R ++++
Sbjct: 135 KGDLYVHIEHFELLTKSLRPLPDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRAKVVA 194
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
IR ++ FMEVETP++H PGGA A+PF THHN+L+M +FLRIAPELYLKRL++GGF
Sbjct: 195 GIRSYLNSERFMEVETPMMHVIPGGASARPFETHHNALDMPLFLRIAPELYLKRLVVGGF 254
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
++FEIN+NFRNEG+S RHNPEFTMIEFY AY +Y LM+ TE M++K+ +D +GTT +
Sbjct: 255 ERVFEINRNFRNEGVSTRHNPEFTMIEFYQAYADYKDLMQLTENMLEKLALDILGTTDVP 314
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFL----KSELKKINPKFNQKKIL 298
YQG + +F ++K+++ +AI ++ P++ ++ ++ FL + ELK+ Q K
Sbjct: 315 YQGEVFNFKGPYKKISMFDAILEHNPEFTPENVNDREFLAKFVREELKE------QVKAG 368
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
L K LQ ++FEET ETKL PT+IT YP E SPLAR++N +N +IT+RFE FI G E
Sbjct: 369 FGLGK--LQTIVFEETVETKLRQPTFITEYPAETSPLARRNN-DNPHITDRFEFFIGGRE 425
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
+ANGFSELNDP +Q+ RF+ Q++ K+ + E + +YD ++I ALEYG+PP +G GIG+DR
Sbjct: 426 LANGFSELNDPIDQAERFQAQVEEKDAGDDE-AMHYDAEFIEALEYGLPPTAGEGIGIDR 484
Query: 419 LIMLLTNSKNIRDVILFPHLRNEN 442
L+M+ ++ +IRDVILFPH+R ++
Sbjct: 485 LVMIFADAPSIRDVILFPHMRRKD 508
>gi|398932871|ref|ZP_10665744.1| lysyl-tRNA synthetase (class II) [Pseudomonas sp. GM48]
gi|398161412|gb|EJM49646.1| lysyl-tRNA synthetase (class II) [Pseudomonas sp. GM48]
Length = 500
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 219/441 (49%), Positives = 314/441 (71%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + + K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLSEETLAAVKTWDMGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L +++++++L+TKSLRPLP+K L++ E +YR RY+DLI+NE+ R+ F+ R+
Sbjct: 124 ARSGKGDLYVEMTNVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEDVRQTFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ K DF+EVETP+L PGGA AKPF THHN+L+M+MFLRIAPELYLKRL+
Sbjct: 184 QVIAHIRSFLMKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGS 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DL + ++ KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTADDLNDIDKARAIAKKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+ N EN N+T+RFELFI G E
Sbjct: 359 GFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDENPNVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFMAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 477 LVMLLTNSPSIRDVILFPHMR 497
>gi|426407961|ref|YP_007028060.1| lysyl-tRNA synthetase [Pseudomonas sp. UW4]
gi|426266178|gb|AFY18255.1| lysyl-tRNA synthetase [Pseudomonas sp. UW4]
Length = 500
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 219/441 (49%), Positives = 314/441 (71%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + + K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLSEETLAAVKTWDMGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L +++++++L+TKSLRPLP+K L++ E +YR RY+DLI+NE+ R+ F+ R+
Sbjct: 124 ARSGKGDLYVEMTNVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEDVRQTFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ K DF+EVETP+L PGGA AKPF THHN+L+M+MFLRIAPELYLKRL+
Sbjct: 184 QVIAHIRSFLMKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGS 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DL + ++ KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTADDLNDIDKARAIAKKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+ N EN N+T+RFELFI G E
Sbjct: 359 GFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDENPNVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFMAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 477 LVMLLTNSPSIRDVILFPHMR 497
>gi|240949401|ref|ZP_04753742.1| lysyl-tRNA synthetase [Actinobacillus minor NM305]
gi|240296150|gb|EER46806.1| lysyl-tRNA synthetase [Actinobacillus minor NM305]
Length = 501
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/441 (50%), Positives = 313/441 (70%), Gaps = 13/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
MLKRVMGK SF +QD SG +IQLY++ + + + +Y+D +D+GDI+G GTLF
Sbjct: 71 MLKRVMGKASFFTIQDVSG-----QIQLYVARDNLAEGVYSDKVSLWDLGDIVGVSGTLF 125
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGEL+++ S ++L+TKSLRPLPNK Q +++QEI+YR RY+DLI NE +R+ F R+Q
Sbjct: 126 KTKTGELTVRCSEVELLTKSLRPLPNKVQGITDQEIRYRQRYLDLISNEESRRTFMIRSQ 185
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
++S IR F + F+EVETP+L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 186 VVSGIRQFFLERGFIEVETPMLQVIPGGAAARPFVTHHNALDVDMYLRIAPELYLKRLVV 245
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTMIE+Y AY +Y LM TE++++K+ +D +GTT
Sbjct: 246 GGFERVFELNRNFRNEGVSVRHNPEFTMIEYYQAYADYHDLMDNTEELLRKLALDILGTT 305
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y + DF K FE++T+ EAI KY + DL + + K ++ + + L
Sbjct: 306 DVPYGEYVFDFGKPFERITMHEAIVKYGNGISMEDLHDFDKAVAIAKGLHIEIQKSWGLG 365
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
++ I FEE E +L PT++ +P EISPLAR+ N EN +T+RFELFI G EI
Sbjct: 366 SIVNAI-----FEEVAEHQLIQPTFLMAHPAEISPLARR-NDENPEVTDRFELFIGGREI 419
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF Q+ K+ + E + + D D++ ALE+G+PP +G G+G+DRL
Sbjct: 420 GNGFSELNDAEDQAERFDAQVAAKDAGDDE-AMFKDEDFVVALEHGLPPTAGEGLGIDRL 478
Query: 420 IMLLTNSKNIRDVILFPHLRN 440
M+ N+ +IRDVILFP +R
Sbjct: 479 AMIFANAPSIRDVILFPAMRQ 499
>gi|255743876|ref|ZP_05417832.1| lysyl-tRNA synthetase (class II) [Vibrio cholera CIRS 101]
gi|262156095|ref|ZP_06029214.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae INDRE 91/1]
gi|262169963|ref|ZP_06037653.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae RC27]
gi|360034572|ref|YP_004936335.1| lysyl-tRNA synthetase [Vibrio cholerae O1 str. 2010EL-1786]
gi|379740523|ref|YP_005332492.1| lysyl-tRNA synthetase [Vibrio cholerae IEC224]
gi|384423910|ref|YP_005633268.1| lysyl-tRNA synthetase [Vibrio cholerae LMA3984-4]
gi|417812711|ref|ZP_12459370.1| lysyl-tRNA synthetase [Vibrio cholerae HC-49A2]
gi|417815578|ref|ZP_12462211.1| lysyl-tRNA synthetase [Vibrio cholerae HCUF01]
gi|417819520|ref|ZP_12466136.1| lysyl-tRNA synthetase [Vibrio cholerae HE39]
gi|417823785|ref|ZP_12470377.1| lysyl-tRNA synthetase [Vibrio cholerae HE48]
gi|418331713|ref|ZP_12942654.1| lysyl-tRNA synthetase [Vibrio cholerae HC-06A1]
gi|418336133|ref|ZP_12945034.1| lysyl-tRNA synthetase [Vibrio cholerae HC-23A1]
gi|418342969|ref|ZP_12949764.1| lysyl-tRNA synthetase [Vibrio cholerae HC-28A1]
gi|418348137|ref|ZP_12952872.1| lysyl-tRNA synthetase [Vibrio cholerae HC-43A1]
gi|418354558|ref|ZP_12957280.1| lysyl-tRNA synthetase [Vibrio cholerae HC-61A1]
gi|419825132|ref|ZP_14348638.1| lysine--tRNA ligase [Vibrio cholerae CP1033(6)]
gi|419829284|ref|ZP_14352772.1| lysine--tRNA ligase [Vibrio cholerae HC-1A2]
gi|419832084|ref|ZP_14355549.1| lysine--tRNA ligase [Vibrio cholerae HC-61A2]
gi|419835584|ref|ZP_14359029.1| lysine--tRNA ligase [Vibrio cholerae HC-46B1]
gi|421315730|ref|ZP_15766302.1| lysyl-tRNA synthetase [Vibrio cholerae CP1032(5)]
gi|421319521|ref|ZP_15770080.1| lysyl-tRNA synthetase [Vibrio cholerae CP1038(11)]
gi|421323570|ref|ZP_15774098.1| lysyl-tRNA synthetase [Vibrio cholerae CP1041(14)]
gi|421327966|ref|ZP_15778481.1| lysyl-tRNA synthetase [Vibrio cholerae CP1042(15)]
gi|421330891|ref|ZP_15781373.1| lysyl-tRNA synthetase [Vibrio cholerae CP1046(19)]
gi|421334558|ref|ZP_15785026.1| lysyl-tRNA synthetase [Vibrio cholerae CP1048(21)]
gi|421338453|ref|ZP_15788889.1| lysyl-tRNA synthetase [Vibrio cholerae HC-20A2]
gi|421341965|ref|ZP_15792372.1| lysyl-tRNA synthetase [Vibrio cholerae HC-43B1]
gi|421345577|ref|ZP_15795963.1| lysyl-tRNA synthetase [Vibrio cholerae HC-46A1]
gi|421350493|ref|ZP_15800859.1| lysyl-tRNA synthetase [Vibrio cholerae HE-25]
gi|421353472|ref|ZP_15803805.1| lysyl-tRNA synthetase [Vibrio cholerae HE-45]
gi|422306158|ref|ZP_16393343.1| lysine--tRNA ligase [Vibrio cholerae CP1035(8)]
gi|422890770|ref|ZP_16933182.1| lysyl-tRNA synthetase [Vibrio cholerae HC-40A1]
gi|422901648|ref|ZP_16937011.1| lysyl-tRNA synthetase [Vibrio cholerae HC-48A1]
gi|422905872|ref|ZP_16940717.1| lysyl-tRNA synthetase [Vibrio cholerae HC-70A1]
gi|422912466|ref|ZP_16946992.1| lysyl-tRNA synthetase [Vibrio cholerae HFU-02]
gi|422916455|ref|ZP_16950793.1| lysyl-tRNA synthetase [Vibrio cholerae HC-02A1]
gi|422921890|ref|ZP_16955095.1| lysyl-tRNA synthetase [Vibrio cholerae BJG-01]
gi|422924951|ref|ZP_16957981.1| lysyl-tRNA synthetase [Vibrio cholerae HC-38A1]
gi|423144269|ref|ZP_17131883.1| lysyl-tRNA synthetase [Vibrio cholerae HC-19A1]
gi|423148921|ref|ZP_17136280.1| lysyl-tRNA synthetase [Vibrio cholerae HC-21A1]
gi|423152766|ref|ZP_17139964.1| lysyl-tRNA synthetase [Vibrio cholerae HC-22A1]
gi|423155571|ref|ZP_17142684.1| lysyl-tRNA synthetase [Vibrio cholerae HC-32A1]
gi|423159409|ref|ZP_17146381.1| lysyl-tRNA synthetase [Vibrio cholerae HC-33A2]
gi|423164092|ref|ZP_17150879.1| lysyl-tRNA synthetase [Vibrio cholerae HC-48B2]
gi|423730225|ref|ZP_17703543.1| lysine--tRNA ligase [Vibrio cholerae HC-17A1]
gi|423733947|ref|ZP_17707163.1| lysine--tRNA ligase [Vibrio cholerae HC-41B1]
gi|423748415|ref|ZP_17711553.1| lysine--tRNA ligase [Vibrio cholerae HC-50A2]
gi|423817364|ref|ZP_17715395.1| lysine--tRNA ligase [Vibrio cholerae HC-55C2]
gi|423849402|ref|ZP_17719184.1| lysine--tRNA ligase [Vibrio cholerae HC-59A1]
gi|423879054|ref|ZP_17722789.1| lysine--tRNA ligase [Vibrio cholerae HC-60A1]
gi|423891944|ref|ZP_17725631.1| lysine--tRNA ligase [Vibrio cholerae HC-62A1]
gi|423926718|ref|ZP_17730246.1| lysine--tRNA ligase [Vibrio cholerae HC-77A1]
gi|423947622|ref|ZP_17733581.1| lysine--tRNA ligase [Vibrio cholerae HE-40]
gi|423976892|ref|ZP_17737129.1| lysine--tRNA ligase [Vibrio cholerae HE-46]
gi|423996876|ref|ZP_17740139.1| lysine--tRNA ligase [Vibrio cholerae HC-02C1]
gi|424001276|ref|ZP_17744365.1| lysine--tRNA ligase [Vibrio cholerae HC-17A2]
gi|424005430|ref|ZP_17748414.1| lysine--tRNA ligase [Vibrio cholerae HC-37A1]
gi|424008232|ref|ZP_17751182.1| lysine--tRNA ligase [Vibrio cholerae HC-44C1]
gi|424015579|ref|ZP_17755426.1| lysine--tRNA ligase [Vibrio cholerae HC-55B2]
gi|424020689|ref|ZP_17760469.1| lysine--tRNA ligase [Vibrio cholerae HC-59B1]
gi|424023439|ref|ZP_17763103.1| lysine--tRNA ligase [Vibrio cholerae HC-62B1]
gi|424026244|ref|ZP_17765860.1| lysine--tRNA ligase [Vibrio cholerae HC-69A1]
gi|424585569|ref|ZP_18025163.1| lysyl-tRNA synthetase [Vibrio cholerae CP1030(3)]
gi|424589909|ref|ZP_18029356.1| lysyl-tRNA synthetase [Vibrio cholerae CP1037(10)]
gi|424594264|ref|ZP_18033602.1| lysyl-tRNA synthetase [Vibrio cholerae CP1040(13)]
gi|424598129|ref|ZP_18037327.1| lysyl-tRNA synthetase [Vibrio Cholerae CP1044(17)]
gi|424600885|ref|ZP_18040042.1| lysyl-tRNA synthetase [Vibrio cholerae CP1047(20)]
gi|424605861|ref|ZP_18044826.1| lysyl-tRNA synthetase [Vibrio cholerae CP1050(23)]
gi|424609696|ref|ZP_18048554.1| lysyl-tRNA synthetase [Vibrio cholerae HC-39A1]
gi|424612499|ref|ZP_18051306.1| lysyl-tRNA synthetase [Vibrio cholerae HC-41A1]
gi|424616321|ref|ZP_18055012.1| lysyl-tRNA synthetase [Vibrio cholerae HC-42A1]
gi|424621255|ref|ZP_18059783.1| lysyl-tRNA synthetase [Vibrio cholerae HC-47A1]
gi|424624060|ref|ZP_18062537.1| lysyl-tRNA synthetase [Vibrio cholerae HC-50A1]
gi|424628555|ref|ZP_18066860.1| lysyl-tRNA synthetase [Vibrio cholerae HC-51A1]
gi|424632591|ref|ZP_18070707.1| lysyl-tRNA synthetase [Vibrio cholerae HC-52A1]
gi|424635677|ref|ZP_18073698.1| lysyl-tRNA synthetase [Vibrio cholerae HC-55A1]
gi|424639591|ref|ZP_18077487.1| lysyl-tRNA synthetase [Vibrio cholerae HC-56A1]
gi|424644234|ref|ZP_18081988.1| lysyl-tRNA synthetase [Vibrio cholerae HC-56A2]
gi|424647674|ref|ZP_18085350.1| lysyl-tRNA synthetase [Vibrio cholerae HC-57A1]
gi|424651877|ref|ZP_18089401.1| lysyl-tRNA synthetase [Vibrio cholerae HC-57A2]
gi|424655826|ref|ZP_18093128.1| lysyl-tRNA synthetase [Vibrio cholerae HC-81A2]
gi|429887895|ref|ZP_19369400.1| Lysyl-tRNA synthetase (class II) [Vibrio cholerae PS15]
gi|440708957|ref|ZP_20889617.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae 4260B]
gi|443502771|ref|ZP_21069760.1| lysyl-tRNA synthetase [Vibrio cholerae HC-64A1]
gi|443506685|ref|ZP_21073475.1| lysyl-tRNA synthetase [Vibrio cholerae HC-65A1]
gi|443510791|ref|ZP_21077455.1| lysyl-tRNA synthetase [Vibrio cholerae HC-67A1]
gi|443514353|ref|ZP_21080892.1| lysyl-tRNA synthetase [Vibrio cholerae HC-68A1]
gi|443518167|ref|ZP_21084584.1| lysyl-tRNA synthetase [Vibrio cholerae HC-71A1]
gi|443523033|ref|ZP_21089273.1| lysyl-tRNA synthetase [Vibrio cholerae HC-72A2]
gi|443528575|ref|ZP_21094609.1| lysyl-tRNA synthetase [Vibrio cholerae HC-78A1]
gi|443530664|ref|ZP_21096680.1| lysyl-tRNA synthetase [Vibrio cholerae HC-7A1]
gi|443534424|ref|ZP_21100336.1| lysyl-tRNA synthetase [Vibrio cholerae HC-80A1]
gi|443538013|ref|ZP_21103869.1| lysyl-tRNA synthetase [Vibrio cholerae HC-81A1]
gi|31340515|sp|Q9KU60.2|SYK_VIBCH RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|255738507|gb|EET93896.1| lysyl-tRNA synthetase (class II) [Vibrio cholera CIRS 101]
gi|262021697|gb|EEY40408.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae RC27]
gi|262030131|gb|EEY48776.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae INDRE 91/1]
gi|327483463|gb|AEA77870.1| Lysyl-tRNA synthetase (class II) [Vibrio cholerae LMA3984-4]
gi|340041082|gb|EGR02050.1| lysyl-tRNA synthetase [Vibrio cholerae HE39]
gi|340042878|gb|EGR03841.1| lysyl-tRNA synthetase [Vibrio cholerae HCUF01]
gi|340043172|gb|EGR04132.1| lysyl-tRNA synthetase [Vibrio cholerae HC-49A2]
gi|340048414|gb|EGR09336.1| lysyl-tRNA synthetase [Vibrio cholerae HE48]
gi|341624971|gb|EGS50444.1| lysyl-tRNA synthetase [Vibrio cholerae HC-70A1]
gi|341626143|gb|EGS51549.1| lysyl-tRNA synthetase [Vibrio cholerae HC-48A1]
gi|341626758|gb|EGS52116.1| lysyl-tRNA synthetase [Vibrio cholerae HC-40A1]
gi|341640088|gb|EGS64683.1| lysyl-tRNA synthetase [Vibrio cholerae HC-02A1]
gi|341640642|gb|EGS65223.1| lysyl-tRNA synthetase [Vibrio cholerae HFU-02]
gi|341647507|gb|EGS71585.1| lysyl-tRNA synthetase [Vibrio cholerae BJG-01]
gi|341648308|gb|EGS72372.1| lysyl-tRNA synthetase [Vibrio cholerae HC-38A1]
gi|356420436|gb|EHH73962.1| lysyl-tRNA synthetase [Vibrio cholerae HC-06A1]
gi|356421149|gb|EHH74654.1| lysyl-tRNA synthetase [Vibrio cholerae HC-21A1]
gi|356425972|gb|EHH79311.1| lysyl-tRNA synthetase [Vibrio cholerae HC-19A1]
gi|356433656|gb|EHH86843.1| lysyl-tRNA synthetase [Vibrio cholerae HC-23A1]
gi|356434166|gb|EHH87348.1| lysyl-tRNA synthetase [Vibrio cholerae HC-22A1]
gi|356437696|gb|EHH90782.1| lysyl-tRNA synthetase [Vibrio cholerae HC-28A1]
gi|356442740|gb|EHH95575.1| lysyl-tRNA synthetase [Vibrio cholerae HC-32A1]
gi|356447715|gb|EHI00503.1| lysyl-tRNA synthetase [Vibrio cholerae HC-43A1]
gi|356449965|gb|EHI02701.1| lysyl-tRNA synthetase [Vibrio cholerae HC-33A2]
gi|356453812|gb|EHI06472.1| lysyl-tRNA synthetase [Vibrio cholerae HC-61A1]
gi|356456229|gb|EHI08838.1| lysyl-tRNA synthetase [Vibrio cholerae HC-48B2]
gi|356645726|gb|AET25781.1| lysyl-tRNA synthetase [Vibrio cholerae O1 str. 2010EL-1786]
gi|378794033|gb|AFC57504.1| lysyl-tRNA synthetase [Vibrio cholerae IEC224]
gi|395922471|gb|EJH33287.1| lysyl-tRNA synthetase [Vibrio cholerae CP1032(5)]
gi|395922785|gb|EJH33600.1| lysyl-tRNA synthetase [Vibrio cholerae CP1041(14)]
gi|395925846|gb|EJH36643.1| lysyl-tRNA synthetase [Vibrio cholerae CP1038(11)]
gi|395930551|gb|EJH41298.1| lysyl-tRNA synthetase [Vibrio cholerae CP1042(15)]
gi|395934744|gb|EJH45482.1| lysyl-tRNA synthetase [Vibrio cholerae CP1046(19)]
gi|395937351|gb|EJH48070.1| lysyl-tRNA synthetase [Vibrio cholerae CP1048(21)]
gi|395944889|gb|EJH55561.1| lysyl-tRNA synthetase [Vibrio cholerae HC-20A2]
gi|395945468|gb|EJH56133.1| lysyl-tRNA synthetase [Vibrio cholerae HC-43B1]
gi|395948522|gb|EJH59167.1| lysyl-tRNA synthetase [Vibrio cholerae HC-46A1]
gi|395954615|gb|EJH65225.1| lysyl-tRNA synthetase [Vibrio cholerae HE-25]
gi|395954819|gb|EJH65428.1| lysyl-tRNA synthetase [Vibrio cholerae HE-45]
gi|395962364|gb|EJH72663.1| lysyl-tRNA synthetase [Vibrio cholerae HC-56A2]
gi|395963557|gb|EJH73820.1| lysyl-tRNA synthetase [Vibrio cholerae HC-57A2]
gi|395966379|gb|EJH76504.1| lysyl-tRNA synthetase [Vibrio cholerae HC-42A1]
gi|395974551|gb|EJH84076.1| lysyl-tRNA synthetase [Vibrio cholerae HC-47A1]
gi|395977415|gb|EJH86825.1| lysyl-tRNA synthetase [Vibrio cholerae CP1030(3)]
gi|395979105|gb|EJH88469.1| lysyl-tRNA synthetase [Vibrio cholerae CP1047(20)]
gi|408009422|gb|EKG47328.1| lysyl-tRNA synthetase [Vibrio cholerae HC-39A1]
gi|408015602|gb|EKG53182.1| lysyl-tRNA synthetase [Vibrio cholerae HC-50A1]
gi|408016195|gb|EKG53749.1| lysyl-tRNA synthetase [Vibrio cholerae HC-41A1]
gi|408020793|gb|EKG58080.1| lysyl-tRNA synthetase [Vibrio cholerae HC-52A1]
gi|408026793|gb|EKG63788.1| lysyl-tRNA synthetase [Vibrio cholerae HC-56A1]
gi|408027228|gb|EKG64210.1| lysyl-tRNA synthetase [Vibrio cholerae HC-55A1]
gi|408036124|gb|EKG72571.1| lysyl-tRNA synthetase [Vibrio cholerae CP1037(10)]
gi|408036579|gb|EKG73003.1| lysyl-tRNA synthetase [Vibrio cholerae HC-57A1]
gi|408036859|gb|EKG73275.1| lysyl-tRNA synthetase [Vibrio cholerae CP1040(13)]
gi|408044570|gb|EKG80476.1| lysyl-tRNA synthetase [Vibrio Cholerae CP1044(17)]
gi|408046278|gb|EKG81978.1| lysyl-tRNA synthetase [Vibrio cholerae CP1050(23)]
gi|408056865|gb|EKG91736.1| lysyl-tRNA synthetase [Vibrio cholerae HC-81A2]
gi|408058598|gb|EKG93388.1| lysyl-tRNA synthetase [Vibrio cholerae HC-51A1]
gi|408611403|gb|EKK84764.1| lysine--tRNA ligase [Vibrio cholerae CP1033(6)]
gi|408621918|gb|EKK94910.1| lysine--tRNA ligase [Vibrio cholerae HC-1A2]
gi|408627078|gb|EKK99903.1| lysine--tRNA ligase [Vibrio cholerae HC-17A1]
gi|408627222|gb|EKL00039.1| lysine--tRNA ligase [Vibrio cholerae CP1035(8)]
gi|408631717|gb|EKL04245.1| lysine--tRNA ligase [Vibrio cholerae HC-41B1]
gi|408636587|gb|EKL08724.1| lysine--tRNA ligase [Vibrio cholerae HC-55C2]
gi|408640814|gb|EKL12598.1| lysine--tRNA ligase [Vibrio cholerae HC-50A2]
gi|408643762|gb|EKL15479.1| lysine--tRNA ligase [Vibrio cholerae HC-60A1]
gi|408644801|gb|EKL16475.1| lysine--tRNA ligase [Vibrio cholerae HC-59A1]
gi|408651985|gb|EKL23224.1| lysine--tRNA ligase [Vibrio cholerae HC-61A2]
gi|408658104|gb|EKL29176.1| lysine--tRNA ligase [Vibrio cholerae HC-77A1]
gi|408659134|gb|EKL30189.1| lysine--tRNA ligase [Vibrio cholerae HC-62A1]
gi|408661668|gb|EKL32652.1| lysine--tRNA ligase [Vibrio cholerae HE-40]
gi|408665990|gb|EKL36793.1| lysine--tRNA ligase [Vibrio cholerae HE-46]
gi|408848152|gb|EKL88205.1| lysine--tRNA ligase [Vibrio cholerae HC-37A1]
gi|408849095|gb|EKL89128.1| lysine--tRNA ligase [Vibrio cholerae HC-17A2]
gi|408854254|gb|EKL94018.1| lysine--tRNA ligase [Vibrio cholerae HC-02C1]
gi|408858997|gb|EKL98667.1| lysine--tRNA ligase [Vibrio cholerae HC-46B1]
gi|408861778|gb|EKM01345.1| lysine--tRNA ligase [Vibrio cholerae HC-55B2]
gi|408866102|gb|EKM05491.1| lysine--tRNA ligase [Vibrio cholerae HC-44C1]
gi|408866554|gb|EKM05934.1| lysine--tRNA ligase [Vibrio cholerae HC-59B1]
gi|408873250|gb|EKM12452.1| lysine--tRNA ligase [Vibrio cholerae HC-62B1]
gi|408881157|gb|EKM20067.1| lysine--tRNA ligase [Vibrio cholerae HC-69A1]
gi|429225063|gb|EKY31349.1| Lysyl-tRNA synthetase (class II) [Vibrio cholerae PS15]
gi|439975698|gb|ELP51810.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae 4260B]
gi|443432891|gb|ELS75412.1| lysyl-tRNA synthetase [Vibrio cholerae HC-64A1]
gi|443436716|gb|ELS82833.1| lysyl-tRNA synthetase [Vibrio cholerae HC-65A1]
gi|443440278|gb|ELS89967.1| lysyl-tRNA synthetase [Vibrio cholerae HC-67A1]
gi|443444373|gb|ELS97647.1| lysyl-tRNA synthetase [Vibrio cholerae HC-68A1]
gi|443448209|gb|ELT04844.1| lysyl-tRNA synthetase [Vibrio cholerae HC-71A1]
gi|443450983|gb|ELT11247.1| lysyl-tRNA synthetase [Vibrio cholerae HC-72A2]
gi|443453149|gb|ELT16982.1| lysyl-tRNA synthetase [Vibrio cholerae HC-78A1]
gi|443458865|gb|ELT26260.1| lysyl-tRNA synthetase [Vibrio cholerae HC-7A1]
gi|443462428|gb|ELT33467.1| lysyl-tRNA synthetase [Vibrio cholerae HC-80A1]
gi|443466446|gb|ELT41104.1| lysyl-tRNA synthetase [Vibrio cholerae HC-81A1]
Length = 510
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/443 (49%), Positives = 311/443 (70%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM K F+++Q+TSG +IQ Y S E+ + L ++ DIGDIIG +G L K+
Sbjct: 78 RVMAKRGPFLVIQETSG-----RIQAYASKEV-QQELKDKYQGLDIGDIIGVQGALHKSG 131
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE++YR RY+DLI+NEN+R F R++++S
Sbjct: 132 KGDLYVNMEQFQLLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNENSRNAFIVRSKVMS 191
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM FMEVETP++H PGGA A+PFITHHN+L+M M+LRIAPELYLKRL++GGF
Sbjct: 192 AIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPMYLRIAPELYLKRLVVGGF 251
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
+++FEIN+NFRNEG+SPRHNPEFTM+EFY AY +Y LM TE+++ + ++ +G+T +
Sbjct: 252 DRVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLGSTSMP 311
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y ++F + ++++ +AIK Y P + +I D+QN+ + S K ++
Sbjct: 312 YGEHTVEFGGKYARMSMFDAIKHYNPNHAQIQALTEEDIQNRDLMVSIAKSVHVDVEPFW 371
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E KL PT+IT YP +ISPLAR+S+ +N T+RFE FI G
Sbjct: 372 TCGQLLEEI-----FGETAEPKLMQPTFITGYPADISPLARRSD-DNPFFTDRFEFFIGG 425
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND E+Q RFK Q++ K + E + +YD DYI ALE+G+PP +G GIG+
Sbjct: 426 REVANGFSELNDAEDQDARFKAQVEAKESGDDE-AMFYDADYITALEHGLPPTAGQGIGI 484
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL+MLLTN+ IRDVILFP +R
Sbjct: 485 DRLVMLLTNTHTIRDVILFPAMR 507
>gi|258624705|ref|ZP_05719639.1| lysyl-tRNA synthetase [Vibrio mimicus VM603]
gi|258582992|gb|EEW07807.1| lysyl-tRNA synthetase [Vibrio mimicus VM603]
Length = 512
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/443 (49%), Positives = 311/443 (70%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM K F+++Q+TSG +IQ Y S E+ + L ++ DIGDIIG +G L K+
Sbjct: 80 RVMAKRGPFLVIQETSG-----RIQAYASKEV-QQELKDKYQGLDIGDIIGVQGALHKSG 133
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE++YR RY+DLI+NEN+R F R++++S
Sbjct: 134 KGDLYVNMEQFQLLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNENSRNAFIVRSKVMS 193
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM FMEVETP++H PGGA A+PFITHHN+L+M M+LRIAPELYLKRL++GGF
Sbjct: 194 AIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPMYLRIAPELYLKRLVVGGF 253
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
+++FEIN+NFRNEG+SPRHNPEFTM+EFY AY +Y LM TE+++ + ++ +G+T +
Sbjct: 254 DRVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLGSTSMP 313
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y ++F + ++++ +AIK Y P + +I D+QN+ + S K ++
Sbjct: 314 YGEHTVEFGGKYVRMSMFDAIKHYNPNHAQIQALTEEDIQNRDLMVSIAKSVHVDVEPFW 373
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E KL PT+IT YP +ISPLAR+S+ +N T+RFE FI G
Sbjct: 374 TCGQLLEEI-----FGETAEPKLMQPTFITGYPADISPLARRSD-DNPFFTDRFEFFIGG 427
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND E+Q RFK Q++ K + E + +YD DYI ALE+G+PP +G GIG+
Sbjct: 428 REVANGFSELNDAEDQDARFKAQVEAKESGDDE-AMFYDADYITALEHGLPPTAGQGIGI 486
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL+MLLTN+ IRDVILFP +R
Sbjct: 487 DRLVMLLTNTHTIRDVILFPAMR 509
>gi|244538966|dbj|BAH83009.1| lysine tRNA synthetase [Candidatus Ishikawaella capsulata Mpkobe]
Length = 502
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 234/442 (52%), Positives = 309/442 (69%), Gaps = 19/442 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
+++RVMGK SF+ LQD G +IQLYIS + + K+ + FK +D+GDIIG G LF
Sbjct: 71 VMRRVMGKASFLTLQDMGG-----RIQLYISCDYLQKDKSNEEFKKWDLGDIIGVCGKLF 125
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI+ ++LK++TKSLRPLPNKF L ++EI YR RY+DLI N+ TR +F R +
Sbjct: 126 KTKTGELSIRCTTLKMLTKSLRPLPNKFHGLMDREICYRQRYLDLISNDKTRYIFHLRAK 185
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+I IRHFM +NDF+EVETP++ PGGA ++PF+THHN+LN+KM++RIAPELYLKRL++
Sbjct: 186 LIEKIRHFMVRNDFIEVETPMMQLIPGGATSRPFVTHHNALNLKMYMRIAPELYLKRLVV 245
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GG +IFEIN+NFRNEG+SPRHNPEFTM+E Y AY +Y LMK E ++ + + GTT
Sbjct: 246 GGLERIFEINRNFRNEGLSPRHNPEFTMMELYMAYADYEDLMKMIENLLSTLAQELFGTT 305
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSE--LKKINPKFNQKKI 297
K+ Y DF F+K TI EAI K+ P DL++ F KS + + +
Sbjct: 306 KLSYGQYTFDFINKFDKFTINEAIIKHNPNLRLGDLED--FAKSSAIARSLGIQIESHWK 363
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L N+ +I FE+T + L PT+IT YP E+SPLAR+ N +N IT+RFE FI GN
Sbjct: 364 LGNIITEI-----FEKTVQAHLIQPTFITEYPVEVSPLARR-NDKNPEITDRFEFFIGGN 417
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EIANGFSELND E+Q+ RF + +E + + D DY+ ALEYG+PP +G GIG+D
Sbjct: 418 EIANGFSELNDMEDQAQRFLTKYQQSDE---QTTLSCDKDYLTALEYGLPPTAGLGIGID 474
Query: 418 RLIMLLTNSKNIRDVILFPHLR 439
RL+M+ T+S NIRDVILFP LR
Sbjct: 475 RLVMIFTDSSNIRDVILFPLLR 496
>gi|440737234|ref|ZP_20916806.1| lysyl-tRNA ligase [Pseudomonas fluorescens BRIP34879]
gi|440382213|gb|ELQ18718.1| lysyl-tRNA ligase [Pseudomonas fluorescens BRIP34879]
Length = 500
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 219/441 (49%), Positives = 313/441 (70%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + + K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLPEETLASVKTWDMGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L ++++S++L+TKSLRPLP+K L++ E +YR RY+DLI+NE+ R+ F+ R+
Sbjct: 124 ARSGKGDLYVEMTSVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEDVRQTFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ K DF+EVETP+L PGGA AKPF THHN+L++ MFLRIAPELYLKRL+
Sbjct: 184 QVIAHIRSFLAKRDFLEVETPMLQTIPGGAAAKPFETHHNALDLPMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGS 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y +L F + F +L++ ++I KY P+ DL + ++ KK K+L
Sbjct: 304 TDVPYGDKLFHFGEPFVRLSVFDSILKYNPELTSDDLNDIDKARAIAKKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+ N +N N+T+RFELFI G E
Sbjct: 359 GFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDDNPNVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFMAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 477 LVMLLTNSPSIRDVILFPHMR 497
>gi|421854836|ref|ZP_16287221.1| lysyl-tRNA synthetase [Acinetobacter radioresistens DSM 6976 = NBRC
102413]
gi|403189851|dbj|GAB73422.1| lysyl-tRNA synthetase [Acinetobacter radioresistens DSM 6976 = NBRC
102413]
Length = 509
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 219/444 (49%), Positives = 321/444 (72%), Gaps = 20/444 (4%)
Query: 4 RVM-GKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM + SFI++QD +G +IQLY++ + + + K D+GDII +G + ++
Sbjct: 80 RVMLNRGSFIVIQDMTG-----RIQLYVARKELDEQTLASIKGLDLGDIIAVQGYIGRSG 134
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TKSLRPLP+KF L++ E+KYR RY+DLI+NE TRK F+ R ++++
Sbjct: 135 KGDLYVHIEHFELLTKSLRPLPDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRAKVVA 194
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
IR ++ FMEVETP++H PGGA A+PF THHN+L+M +FLRIAPELYLKRL++GGF
Sbjct: 195 GIRSYLNSERFMEVETPMMHVIPGGASARPFETHHNALDMPLFLRIAPELYLKRLVVGGF 254
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
++FEIN+NFRNEG+S RHNPEFTMIEFY AY +Y LM+ TE M++K+ +D +GTT +
Sbjct: 255 ERVFEINRNFRNEGVSTRHNPEFTMIEFYQAYADYKDLMQLTENMLEKLALDILGTTDVP 314
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFL----KSELKKINPKFNQKKIL 298
YQG + +F ++K+++ +AI ++ P++ ++ ++ FL + ELK+ Q K
Sbjct: 315 YQGEVFNFKGPYKKISMFDAILEHNPEFTPENVNDREFLAKFVREELKE------QVKAG 368
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
L K LQ ++FEET ETKL PT+IT YP E SPLAR++N +N +IT+RFE FI G E
Sbjct: 369 FGLGK--LQTIVFEETVETKLRQPTFITEYPAETSPLARRNN-DNPHITDRFEFFIGGRE 425
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
+ANGFSELNDP +Q+ RF+ Q++ K+ + E + +YD ++I ALEYG+PP +G GIG+DR
Sbjct: 426 LANGFSELNDPIDQAERFQAQVEEKDAGDDE-AMHYDAEFIEALEYGLPPTAGEGIGIDR 484
Query: 419 LIMLLTNSKNIRDVILFPHLRNEN 442
L+M+ ++ +IRDVILFPH+R ++
Sbjct: 485 LVMIFADAPSIRDVILFPHMRRKD 508
>gi|187932242|ref|YP_001892227.1| lysyl-tRNA synthetase [Francisella tularensis subsp. mediasiatica
FSC147]
gi|187713151|gb|ACD31448.1| lysyl-tRNA synthetase [Francisella tularensis subsp. mediasiatica
FSC147]
Length = 576
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/442 (50%), Positives = 314/442 (71%), Gaps = 13/442 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNY-DIGDIIGAKGTLF 59
+L+RVMGK SFI LQD +G +IQ+Y+ + Y FKN D+GDI+G GT+F
Sbjct: 147 VLRRVMGKASFITLQDYTG-----RIQVYLKKSDLPDGQYETFKNLCDLGDIVGITGTMF 201
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KTNTGELS++ + +++TK++RPLP+KF L++QE++YR RY+DLI NE R+VFK R++
Sbjct: 202 KTNTGELSVEANHFEILTKAIRPLPDKFHGLADQEMRYRQRYVDLITNEKAREVFKVRSK 261
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR++ ++ DFMEVETP++H GGA AKPF THHN+L+M ++LRIAPELYLKRL++
Sbjct: 262 VVNFIRNYFDRLDFMEVETPMMHVLQGGAAAKPFKTHHNALDMPLYLRIAPELYLKRLVV 321
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF +++EIN+NFRNEG+S RHNPEFTM+EFY AY +Y LM TE M+ K++ + IG+
Sbjct: 322 GGFERVYEINRNFRNEGVSSRHNPEFTMLEFYIAYADYNDLMDLTEDMLSKLVQEVIGSE 381
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++Y ++F +E+++++++I KY + DL K +K+ K L
Sbjct: 382 ILEYGEYKINFGGKYERISMVDSIVKYNDDITKEDLVTFESAKKIAEKLKIKVEAYHELG 441
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+L +I FEET E +L PT+IT+YP +SPLAR+ + N T+RFE FI E+
Sbjct: 442 HLINEI-----FEETVEHQLIQPTFITDYPAVVSPLARRQD-GNPEFTDRFEFFIGAREV 495
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
ANGFSELND E+Q+ RF+ Q++ + E + YD DYI ALEYGMPP +G GIG+DRL
Sbjct: 496 ANGFSELNDAEDQAERFRKQVEAAASGDDE-AMPYDKDYIRALEYGMPPTAGQGIGIDRL 554
Query: 420 IMLLTNSKNIRDVILFPHLRNE 441
+M LTNS++IRDVILFPH++ E
Sbjct: 555 VMYLTNSQSIRDVILFPHMKPE 576
>gi|148265268|ref|YP_001231974.1| lysyl-tRNA synthetase [Geobacter uraniireducens Rf4]
gi|146398768|gb|ABQ27401.1| lysyl-tRNA synthetase [Geobacter uraniireducens Rf4]
Length = 494
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 226/446 (50%), Positives = 310/446 (69%), Gaps = 23/446 (5%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
+ +R GK +F+ LQD G+ QLY+ + IG ++ F+++DIGDI+GA G F+
Sbjct: 65 IARRSFGKAAFVQLQD-----RKGRFQLYVKKDAIGDEVFGQFESFDIGDIVGAVGYPFR 119
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+ V ++L+TKSL PLP KF L++ E +YR RY+DLI+N R+VF KR++I
Sbjct: 120 TKTGELSLHVLEIRLLTKSLLPLPEKFHGLTDVETRYRQRYVDLIVNPEVREVFAKRSRI 179
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
++ IR FM KNDF+EVETP++ PGGA A+PF+THHN+L+M++FLRIAPELYLKRL++G
Sbjct: 180 VNLIRAFMVKNDFLEVETPMMQQIPGGATARPFVTHHNALDMELFLRIAPELYLKRLVVG 239
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G +++FEIN+NFRNEGIS RHNPEFTM+EFY AY + LM FTE+++ + D +GT
Sbjct: 240 GLDRVFEINRNFRNEGISVRHNPEFTMMEFYQAYATFEDLMNFTEELLCHVAHDVLGTLD 299
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFN-QKKILN 299
YQG + F + +++ T+ EAI +Y +ID ++ L+ + F K+I
Sbjct: 300 FSYQGMPISFQRPWKRFTVKEAIL----EYGDIDAKS-------LEDRDMAFAYAKRIGL 348
Query: 300 NLKKDI----LQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFII 355
+L +DI L +FEE ETKL PT+IT YPTE+SPL+RK N + I +RFE F
Sbjct: 349 DLPEDIGYGKLVTEIFEEVAETKLIQPTFITAYPTEVSPLSRK-NDHDPEIVDRFEFFCA 407
Query: 356 GNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIG 415
G E+AN FSELNDP +Q RF Q+ K + + E + Y D DYI ALEYG+PP +G GIG
Sbjct: 408 GREMANAFSELNDPVDQKERFLAQVAAKAKGDEE-AHYMDEDYIRALEYGLPPTAGEGIG 466
Query: 416 VDRLIMLLTNSKNIRDVILFPHLRNE 441
+DRL+MLLT++ +IRDVILFP LR E
Sbjct: 467 IDRLVMLLTDAPSIRDVILFPQLRKE 492
>gi|226736754|sp|B8CU98.1|SYK_SHEPW RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|212558500|gb|ACJ30954.1| Lysyl-tRNA synthetase, class-2 [Shewanella piezotolerans WP3]
Length = 500
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 223/443 (50%), Positives = 310/443 (69%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM K F+++QD SG +IQ Y ++ K+L F+ DIGDIIG G L +
Sbjct: 68 RVMAKRGPFLVIQDVSG-----RIQAYAGKDV-QKDLKATFQGLDIGDIIGVTGKLHLSG 121
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF LS+QE +YR RY+DLI+NE +R+ F R++++S
Sbjct: 122 KGDLYVNMEQYQLLTKALRPLPEKFHGLSDQETRYRQRYVDLIVNEESREAFIMRSKVVS 181
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM K +FMEVETP++H+ PGGA A+PF THHN+L+M M+LRIAPELYLKRL++GGF
Sbjct: 182 AIRNFMIKKEFMEVETPMMHSIPGGASARPFETHHNALDMAMYLRIAPELYLKRLVVGGF 241
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
++FE+N+NFRNEG+SPRHNPEFTM+EFY AY +Y LM TE+M+ I D G+T++
Sbjct: 242 ERVFEVNRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEEMLSSIATDLCGSTQLP 301
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y +DF + +L++++AIKKY P+ I ++++ F+++ K I +
Sbjct: 302 YGEHTVDFGGPYARLSMLDAIKKYNPENATIQSMTYEEVKDVEFMRNLAKSIGMTIEKFW 361
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E +L PT+IT YP +ISPLAR+ N EN+ IT+RFE FI G
Sbjct: 362 TCGQLLEEI-----FGETAEPQLMQPTFITGYPADISPLARR-NDENHFITDRFEFFIGG 415
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND E+Q RFK Q+D K+ + E + +YD DYI ALE+G+PP +G GIG+
Sbjct: 416 REVANGFSELNDAEDQDNRFKAQVDAKDAGDDE-AMFYDADYIRALEHGLPPTAGQGIGI 474
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL+ML TN+ IRDVILFP +R
Sbjct: 475 DRLVMLFTNTHTIRDVILFPAMR 497
>gi|107103214|ref|ZP_01367132.1| hypothetical protein PaerPA_01004283 [Pseudomonas aeruginosa PACS2]
gi|218890023|ref|YP_002438887.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
gi|254236610|ref|ZP_04929933.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa C3719]
gi|254242395|ref|ZP_04935717.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
gi|386057313|ref|YP_005973835.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa M18]
gi|392982576|ref|YP_006481163.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa DK2]
gi|416860163|ref|ZP_11914172.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa 138244]
gi|419754709|ref|ZP_14281067.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa PADK2_CF510]
gi|420138101|ref|ZP_14646042.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa CIG1]
gi|421152491|ref|ZP_15612071.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa ATCC 14886]
gi|421158506|ref|ZP_15617755.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa ATCC 25324]
gi|421179136|ref|ZP_15636732.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa E2]
gi|424939441|ref|ZP_18355204.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa NCMG1179]
gi|451987719|ref|ZP_21935871.1| Lysyl-tRNA synthetase (class II) [Pseudomonas aeruginosa 18A]
gi|226736753|sp|B7V0Z5.1|SYK_PSEA8 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|126168541|gb|EAZ54052.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa C3719]
gi|126195773|gb|EAZ59836.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
gi|218770246|emb|CAW26011.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
gi|334837755|gb|EGM16504.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa 138244]
gi|346055887|dbj|GAA15770.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa NCMG1179]
gi|347303619|gb|AEO73733.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa M18]
gi|384398527|gb|EIE44932.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa PADK2_CF510]
gi|392318081|gb|AFM63461.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa DK2]
gi|403249084|gb|EJY62599.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa CIG1]
gi|404525251|gb|EKA35527.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa ATCC 14886]
gi|404547379|gb|EKA56377.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa E2]
gi|404549514|gb|EKA58371.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa ATCC 25324]
gi|451754478|emb|CCQ88394.1| Lysyl-tRNA synthetase (class II) [Pseudomonas aeruginosa 18A]
gi|453047293|gb|EME95007.1| lysyl-tRNA ligase [Pseudomonas aeruginosa PA21_ST175]
Length = 501
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 219/441 (49%), Positives = 313/441 (70%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SFI+LQD+S ++Q+Y++ + + + + K +D+GDIIGA+G L
Sbjct: 70 KVAGRIMLNRGSFIVLQDSSE-----RLQVYVNRKTLPEETLAEIKTWDLGDIIGAEGVL 124
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L + ++S++L+TKSLRPLP+K L++ E +YR RY+DL++NE TR F+ R+
Sbjct: 125 ARSGKGDLYVDMTSVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLMVNEETRHTFRVRS 184
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ + F+EVETP+L PGGA AKPF THHN+L+M MFLRIAPELYLKRL+
Sbjct: 185 QVIAHIRRFLSERGFLEVETPMLQTIPGGAAAKPFETHHNALDMAMFLRIAPELYLKRLV 244
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +GT
Sbjct: 245 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQAVLGT 304
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DL + ++ KK K+L
Sbjct: 305 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPEITAADLNDVEKARAIAKKAG-----AKVL 359
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
+ LQ+M+FEE E KL P +IT YP E+SPLAR+ N E+ ++T+RFELFI G E
Sbjct: 360 GHEGLGKLQVMIFEELVEHKLEQPHFITRYPFEVSPLARR-NDEDPSVTDRFELFIGGRE 418
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + +YD D+I+ALEYGMPP +G GIG+DR
Sbjct: 419 IANAYSELNDAEDQAERFMLQVKEKDAGDDE-AMHYDADFINALEYGMPPTAGEGIGIDR 477
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 478 LVMLLTNSPSIRDVILFPHMR 498
>gi|254524293|ref|ZP_05136348.1| lysyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
gi|219721884|gb|EED40409.1| lysyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
Length = 489
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 214/446 (47%), Positives = 306/446 (68%), Gaps = 21/446 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M KR+MGK SF +QD SG +IQL++ ++G + YT FK +D+GDII +G L +
Sbjct: 61 MAKRIMGKASFAQIQDESG-----RIQLFLQGTVLG-DAYTAFKGWDVGDIIAVEGGLTR 114
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+K S++L+TKSLRPLP+K+ L++ E +YR RY+DLI+ +R VF KR++I
Sbjct: 115 TKTGELSVKAESIRLLTKSLRPLPDKWHGLADVEQRYRQRYVDLIVTPESRAVFIKRSKI 174
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I ++R +++ DF+EVETP++H PGGA AKPF THHN+L++ ++LR+APELYLKRL +G
Sbjct: 175 IRAMRAWLDNRDFLEVETPMMHYIPGGAAAKPFTTHHNALDLDLYLRVAPELYLKRLTVG 234
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G +++EIN+NFRNEG+S RHNPEFTM+E Y AY Y +M TE +I+ + G T+
Sbjct: 235 GLERVYEINRNFRNEGVSTRHNPEFTMMELYEAYATYNEIMDLTEGVIRDVAQAVNGGTE 294
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELK----KINPKFNQKK 296
+++ G +D +F + + EA++ + P+ + D ++ L + K+ P + K
Sbjct: 295 VEWDGAKIDLGPAFRRWRMDEAVRHHNPEISAADCTDRDALLRHCERLKIKVKPSYGWGK 354
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
+L L +FE T E L PT+IT++P E+SPLAR +N + T+RFELF+ G
Sbjct: 355 LL---------LEIFEATVEHTLIQPTFITDHPVEVSPLAR-ANDNDPGYTDRFELFVNG 404
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELNDPE+Q+ RF+ Q+ K + E + +YD DYI ALEYGM P G GIGV
Sbjct: 405 KELANGFSELNDPEDQAQRFQAQVAAKEGGDDE-AMHYDADYIRALEYGMAPTGGLGIGV 463
Query: 417 DRLIMLLTNSKNIRDVILFPHLRNEN 442
DRL+MLLT S +IRDV+LFP++R E
Sbjct: 464 DRLVMLLTGSSSIRDVLLFPYMRPEQ 489
>gi|223042067|ref|ZP_03612243.1| lysyl-tRNA synthase [Actinobacillus minor 202]
gi|223017142|gb|EEF15578.1| lysyl-tRNA synthase [Actinobacillus minor 202]
Length = 501
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/441 (49%), Positives = 313/441 (70%), Gaps = 13/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
MLKRVMGK SF +QD SG ++QLY++ + + + +Y+D +D+GDI+G GTLF
Sbjct: 71 MLKRVMGKASFFTIQDVSG-----QVQLYVARDNLAEGVYSDKVGLWDLGDIVGVSGTLF 125
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGEL+++ S ++L+TKSLRPLPNK Q +++QEI+YR RY+DLI NE +R+ F R+Q
Sbjct: 126 KTKTGELTVRCSEVELLTKSLRPLPNKVQGITDQEIRYRQRYLDLISNEESRRTFMIRSQ 185
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
++S IR F + F+EVETP+L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 186 VVSGIRQFFLERGFIEVETPMLQVIPGGAAARPFVTHHNALDVDMYLRIAPELYLKRLVV 245
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTMIE+Y AY +Y LM TE++++K+ +D +GTT
Sbjct: 246 GGFERVFELNRNFRNEGVSVRHNPEFTMIEYYQAYADYHDLMDNTEELLRKLALDILGTT 305
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y + DF K FE++T+ EAI KY + DL + + K ++ + + L
Sbjct: 306 DVPYGEYVFDFGKPFERITMHEAIVKYGNGISMEDLHDFDKAVAIAKGLHIEIQKSWGLG 365
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
++ I FEE E +L PT++ +P EISPLAR+ N EN +T+RFELFI G EI
Sbjct: 366 SIVNAI-----FEEVAEHQLIQPTFLMAHPAEISPLARR-NDENPEVTDRFELFIGGREI 419
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF Q+ K+ + E + + D D++ ALE+G+PP +G G+G+DRL
Sbjct: 420 GNGFSELNDAEDQAERFDAQVAAKDAGDDE-AMFKDEDFVVALEHGLPPTAGEGLGIDRL 478
Query: 420 IMLLTNSKNIRDVILFPHLRN 440
M+ N+ +IRDVILFP +R
Sbjct: 479 AMIFANAPSIRDVILFPAMRQ 499
>gi|104780460|ref|YP_606958.1| lysyl-tRNA synthetase [Pseudomonas entomophila L48]
gi|123079246|sp|Q1IDW1.1|SYK_PSEE4 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|95109447|emb|CAK14148.1| lysyl-tRNA synthetase [Pseudomonas entomophila L48]
Length = 500
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 218/441 (49%), Positives = 313/441 (70%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + ++ K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLSEDTLAAVKTWDLGDIISAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L +++++++L+TKSLRPLP+K L++ E +YR RY+DL++NE TR F+ R+
Sbjct: 124 ARSGKGDLYVEMTNVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLMVNEETRHTFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+IS IR F+ + DF+EVETP+L PGGA AKPF THHN+L+M MFLRIAPELYLKRL+
Sbjct: 184 QVISHIRKFLIERDFLEVETPMLQTIPGGAAAKPFETHHNALDMAMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYRDNMDLTEELFRELAQLVLGS 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DLQ+ + KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTAADLQDVDRAREIAKKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
+ LQ+M+FEE E KL P +IT YP E+SPLAR+ N +N +T+RFELFI G E
Sbjct: 359 GHEGLGKLQVMIFEELVEHKLEQPHFITEYPFEVSPLARR-NDDNPAVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFLAQVAEKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 477 LVMLLTNSPSIRDVILFPHMR 497
>gi|399002800|ref|ZP_10705479.1| lysyl-tRNA synthetase (class II) [Pseudomonas sp. GM18]
gi|398124031|gb|EJM13555.1| lysyl-tRNA synthetase (class II) [Pseudomonas sp. GM18]
Length = 500
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 217/435 (49%), Positives = 311/435 (71%), Gaps = 12/435 (2%)
Query: 5 VMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTNTG 64
++ + SF+++QD SG +IQ+Y++ + + + K +D+GDII A+GTL ++ G
Sbjct: 75 MLNRGSFMVIQDMSG-----RIQVYVNRKTLSEETLAAVKTWDLGDIIAAEGTLARSGKG 129
Query: 65 ELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIISSI 124
+L +++++++L+TKSLRPLP+K LS+ E +YR RY+DLI+NE+ R+ F+ R+Q+I+ I
Sbjct: 130 DLYVEMTNVRLLTKSLRPLPDKHHGLSDTEQRYRQRYVDLIVNEDVRQTFRVRSQVIAHI 189
Query: 125 RHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGFNK 184
R F+ K DF+EVETP+L PGGA AKPF THHN+L+M+MFLRIAPELYLKRL++GGF K
Sbjct: 190 RSFLMKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMQMFLRIAPELYLKRLVVGGFEK 249
Query: 185 IFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKIDYQ 244
+FEIN+NFRNEG+S RHNPEFTM+EFY A+ +Y M TE++ +++ +G+T + Y
Sbjct: 250 VFEINRNFRNEGVSTRHNPEFTMLEFYQAHADYEDNMDLTEELFRELAQLVLGSTDVPYG 309
Query: 245 GRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNNLKKD 304
++ F + F +L++ ++I KY P DL + ++ KK K+L
Sbjct: 310 DKVFHFGEPFVRLSVFDSILKYNPDLTADDLNDIDKARAIAKKAG-----AKVLGFEGLG 364
Query: 305 ILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIANGFS 364
LQ+M+FEE E KL P +IT YP E+SPLAR+ N EN N+T+RFELFI G EIAN +S
Sbjct: 365 KLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDENPNVTDRFELFIGGREIANAYS 423
Query: 365 ELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLIMLLT 424
ELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DRL+MLLT
Sbjct: 424 ELNDAEDQAERFMAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDRLVMLLT 482
Query: 425 NSKNIRDVILFPHLR 439
NS +IRDVILFPH+R
Sbjct: 483 NSPSIRDVILFPHMR 497
>gi|126641048|ref|YP_001084032.1| lysyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
Length = 428
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 219/440 (49%), Positives = 314/440 (71%), Gaps = 21/440 (4%)
Query: 5 VMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTNTG 64
++ + SF+++QD +G +IQLY+ + + K+ K D+GDII A+G + ++ G
Sbjct: 1 MLNRGSFMVIQDMTG-----RIQLYVDRKGLPKDTLETIKGLDLGDIIAAEGYIGRSGKG 55
Query: 65 ELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIISSI 124
+L + + +L+TKSLRPLP+KF L++ E+KYR RY+DLI+NE TRK F+ R ++++ I
Sbjct: 56 DLYVHLEGFELLTKSLRPLPDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRAKVVAGI 115
Query: 125 RHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGFNK 184
R F+ FMEVETP++H PGGA A+PF THHN+L+M +FLRIAPELYLKRL++GGF +
Sbjct: 116 RAFLTNERFMEVETPMMHVIPGGASARPFETHHNALDMPLFLRIAPELYLKRLVVGGFER 175
Query: 185 IFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKIDYQ 244
+FEIN+NFRNEG+S RHNPEFTMIEFY AY +Y LM TE M++K+ +D +GTT + YQ
Sbjct: 176 VFEINRNFRNEGVSTRHNPEFTMIEFYQAYADYKDLMALTENMLEKLAIDILGTTDVPYQ 235
Query: 245 GRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFL----KSELK-KINPKFNQKKILN 299
G + F F+K+++ +AI + PQ+ ++ ++ FL + ELK ++ P F K
Sbjct: 236 GEVFSFKGPFKKISMFDAILENNPQFTPENVGDREFLAKFVREELKEEVKPGFGLGK--- 292
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
LQ ++FEET ETKL PT+IT YP E SPLAR+ N +N +IT+RFE FI G E+
Sbjct: 293 ------LQTIVFEETVETKLRQPTFITEYPAETSPLARR-NDDNPHITDRFEFFIGGREL 345
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
ANGFSELNDP +Q+ RF+ Q+ K+ + E + +YD +++ ALEYG+PP +G GIG+DRL
Sbjct: 346 ANGFSELNDPIDQAERFQAQVAEKDAGDDE-AMHYDAEFVEALEYGLPPTAGEGIGIDRL 404
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+ML ++ +IRDVILFPH+R
Sbjct: 405 VMLFADAPSIRDVILFPHMR 424
>gi|307261289|ref|ZP_07542964.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12
str. 1096]
gi|306869020|gb|EFN00822.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12
str. 1096]
Length = 500
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 226/447 (50%), Positives = 312/447 (69%), Gaps = 25/447 (5%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
MLKRVMGK SF +QD SG +IQLY + + + + +Y D +D+GDI+G GTLF
Sbjct: 71 MLKRVMGKASFFTIQDVSG-----QIQLYAARDNLAEGVYADKVSMWDLGDIVGVAGTLF 125
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGEL+++ S ++L+TKSLRPLPNK Q L++QE +YR RY+DLI NE +R+ F R++
Sbjct: 126 KTKTGELTVRCSEVELLTKSLRPLPNKVQGLTDQETRYRQRYLDLISNEESRRTFMIRSK 185
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
++S IR F + DF+EVETP+L PGGA AKPFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 186 VVSGIRQFFLEKDFIEVETPMLQVIPGGAAAKPFITHHNALDVDMYLRIAPELYLKRLVV 245
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTMIE+Y AY +Y LM TE++++K+ +D +GTT
Sbjct: 246 GGFERVFELNRNFRNEGVSVRHNPEFTMIEYYQAYADYHDLMDNTEELLRKLAIDILGTT 305
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKS-ELKK-----INPKFN 293
+ Y + DF K FE++T+ +AI KY DL + F KS E+ K I +
Sbjct: 306 TVPYGEYVFDFGKPFERITMHDAIVKYGNGITREDLDS--FEKSVEIAKGLGIEIQKSWG 363
Query: 294 QKKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELF 353
++N +FEE E +L PT++ +P EISPLAR+ N EN +T+RFELF
Sbjct: 364 LGSVVN---------AIFEEVAEHQLIQPTFLMAHPAEISPLARR-NDENPEVTDRFELF 413
Query: 354 IIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCG 413
I G EI NGFSELND E+Q+ RF Q+ K+ + E + + D D++ ALE+G+PP +G G
Sbjct: 414 IGGREIGNGFSELNDAEDQAERFDAQVAAKDAGDDE-AMFKDEDFVVALEHGLPPTAGEG 472
Query: 414 IGVDRLIMLLTNSKNIRDVILFPHLRN 440
+G+DRL M+ N+ +IRDVILFP +R
Sbjct: 473 LGIDRLAMIFANAPSIRDVILFPAMRQ 499
>gi|389683069|ref|ZP_10174401.1| lysine--tRNA ligase [Pseudomonas chlororaphis O6]
gi|388552582|gb|EIM15843.1| lysine--tRNA ligase [Pseudomonas chlororaphis O6]
Length = 499
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 219/441 (49%), Positives = 315/441 (71%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + ++ K +D+GDII A+GTL
Sbjct: 68 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLPEDTLNAVKTWDLGDIIAAEGTL 122
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L +++++++L+TKSLRPLP+K L++ E +YR RY+DLI+NE+ R+ F+ R+
Sbjct: 123 ARSGKGDLYVEMTNVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEDVRETFRVRS 182
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ K DF+EVETP+L PGGA AKPF THHN+L+M+MFLRIAPELYLKRL+
Sbjct: 183 QVIAHIRSFLMKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMFLRIAPELYLKRLV 242
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 243 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGS 302
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DL + ++ KK K+L
Sbjct: 303 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTADDLNDIDKARAIAKKAG-----AKVL 357
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+ N EN N+T+RFELFI G E
Sbjct: 358 GFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDENPNVTDRFELFIGGRE 416
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 417 IANAYSELNDAEDQAERFMAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 475
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 476 LVMLLTNSPSIRDVILFPHMR 496
>gi|333899356|ref|YP_004473229.1| Lysyl-tRNA synthetase [Pseudomonas fulva 12-X]
gi|333114621|gb|AEF21135.1| Lysyl-tRNA synthetase [Pseudomonas fulva 12-X]
Length = 500
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 216/443 (48%), Positives = 314/443 (70%), Gaps = 17/443 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I +F+++QD SG +IQ+Y++ + + + K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGAFMVIQDMSG-----RIQVYVNRKTLPEETLAQVKTWDMGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L ++++S++L+TKSLRPLP+K L++ E +YR RY+DLI+NE R F+ R+
Sbjct: 124 ARSGKGDLYVEMTSVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEEVRDTFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ + +F+EVETP+L PGGA AKPF THHN+L+M MFLRIAPELYLKRL+
Sbjct: 184 QVIAHIRKFLAERNFLEVETPMLQTIPGGAAAKPFETHHNALDMAMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQTILGS 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DLQ+ ++ KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPEITAADLQDLDKARAIAKKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+S+ ++ ++T+RFELFI G E
Sbjct: 359 GFEGLGKLQVMIFEELVEHKLEQPHFITRYPFEVSPLARRSD-DDPSVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + ++D D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAARFMQQVADKDAGDDE-AMHFDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLRNE 441
L+MLLTNS +IRDVILFPH+R E
Sbjct: 477 LVMLLTNSPSIRDVILFPHMRPE 499
>gi|70728520|ref|YP_258269.1| lysyl-tRNA synthetase [Pseudomonas protegens Pf-5]
gi|123734892|sp|Q4KHL4.1|SYK_PSEF5 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|68342819|gb|AAY90425.1| lysine--tRNA ligase [Pseudomonas protegens Pf-5]
Length = 500
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 218/441 (49%), Positives = 313/441 (70%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + + K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLSEETLASVKTWDMGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L +++++++L+TKSLRPLP+K L++ E +YR RY+DLI+NE R+ F+ R+
Sbjct: 124 ARSGKGDLYVEMTNVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEEVRQTFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ K DF+EVETP+L PGGA AKPF THHN+L+M+MFLRIAPELYLKRL+
Sbjct: 184 QVIAHIRSFLMKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGS 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DL + ++ KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFARLSVFDSILKYNPELTADDLNDIDKARAIAKKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+ N +N N+T+RFELFI G E
Sbjct: 359 GFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDDNPNVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFMAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 477 LVMLLTNSPSIRDVILFPHMR 497
>gi|229525317|ref|ZP_04414722.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae bv. albensis
VL426]
gi|229338898|gb|EEO03915.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae bv. albensis
VL426]
Length = 510
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/443 (49%), Positives = 310/443 (69%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM K F+++Q+TSG +IQ Y S E+ + L ++ DIGDIIG +G L K+
Sbjct: 78 RVMAKRGPFLVIQETSG-----RIQAYASKEV-QQELKDKYQGLDIGDIIGVQGALHKSG 131
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE++YR RY+DLI+NEN+R F R++++S
Sbjct: 132 KGDLYVNMEQFQLLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNENSRNAFIVRSKVMS 191
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM FMEVETP++H PGGA A+PFITHHN+L+M M+LRIAPELYLKRL++GGF
Sbjct: 192 AIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPMYLRIAPELYLKRLVVGGF 251
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
+++FEIN+NFRNEG+SPRHNPEFTM+EFY AY +Y LM TE+++ + ++ +G+T +
Sbjct: 252 DRVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLGSTSMP 311
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y ++F + ++++ +AIK Y P + I D+QN+ + S K ++
Sbjct: 312 YGEHTVEFGGKYARMSMFDAIKHYNPNHAHIQALTEEDIQNRDLMVSIAKSVHVDVEPFW 371
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E KL PT+IT YP +ISPLAR+S+ +N T+RFE FI G
Sbjct: 372 TCGQLLEEI-----FGETAEPKLMQPTFITGYPADISPLARRSD-DNPFFTDRFEFFIGG 425
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND E+Q RFK Q++ K + E + +YD DYI ALE+G+PP +G GIG+
Sbjct: 426 REVANGFSELNDAEDQDARFKAQVEAKESGDDE-AMFYDADYITALEHGLPPTAGQGIGI 484
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL+MLLTN+ IRDVILFP +R
Sbjct: 485 DRLVMLLTNTHTIRDVILFPAMR 507
>gi|146689|gb|AAA24096.1| lysyl-tRNA synthetase (lysU) (E.C. 6.1.1.6) [Escherichia coli]
Length = 501
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 225/440 (51%), Positives = 307/440 (69%), Gaps = 17/440 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF+ LQD G +IQLY++ + + + +Y D FK +D+GDIIGA GTLF
Sbjct: 75 MTRRIMGKASFVTLQDVGG-----RIQLYVARDSLPEGVYNDQFKKWDLGDIIGA-GTLF 128
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELSI + L+L+TK+LRPLP+KF L +QE++YR RY+DLI N+ +R+ F R++
Sbjct: 129 KTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSK 188
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+++IR FM FMEVETP++ PGGA A+PFITHHN+L++ M+ RIAPELYLKRL++
Sbjct: 189 ILAAIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYARIAPELYLKRLVV 248
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE RNEGI RHNPEFTM+E Y AY +Y L++ TE + + + + +GTT
Sbjct: 249 GGFERVFE--HVTRNEGIR-RHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTT 305
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
K+ Y + DF K FEKLT+ EAIKKY P+ + DL N K+ + I + L
Sbjct: 306 KVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDARKALAESIGITVEKSWGLG 365
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+I F+E E + P++IT YP E+SPLAR++++ N IT+RFE FI G EI
Sbjct: 366 RSVTEI-----FDEVVEGHVIQPSFITEYPAEVSPLARRNDV-NPEITDRFEFFIGGREI 419
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF+ Q++ K + E + +YD DY+ ALEYG+PP +G GIG+DR+
Sbjct: 420 GNGFSELNDAEDQAERFQEQVNAKAAGDDE-AMFYDEDYVTALEYGLPPTAGLGIGIDRM 478
Query: 420 IMLLTNSKNIRDVILFPHLR 439
IML TNS IRDVILFP +R
Sbjct: 479 IMLFTNSHTIRDVILFPAMR 498
>gi|398877442|ref|ZP_10632587.1| lysyl-tRNA synthetase (class II) [Pseudomonas sp. GM67]
gi|398886664|ref|ZP_10641529.1| lysyl-tRNA synthetase (class II) [Pseudomonas sp. GM60]
gi|398188744|gb|EJM76039.1| lysyl-tRNA synthetase (class II) [Pseudomonas sp. GM60]
gi|398202337|gb|EJM89183.1| lysyl-tRNA synthetase (class II) [Pseudomonas sp. GM67]
Length = 500
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 218/441 (49%), Positives = 314/441 (71%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + + K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLSEETLAAVKTWDMGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L ++++S++L+TKSLRPLP+K L++ E +YR RY+DLI+NE+ R+ F+ R+
Sbjct: 124 ARSGKGDLYVEMTSVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEDVRQTFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ + DF+EVETP+L PGGA AKPF THHN+L+M+MFLRIAPELYLKRL+
Sbjct: 184 QVIAHIRSFLMQRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGS 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DL + ++ KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTADDLNDIDKARAIAKKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+ N +N N+T+RFELFI G E
Sbjct: 359 GFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDDNPNVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFMAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 477 LVMLLTNSPSIRDVILFPHMR 497
>gi|389714828|ref|ZP_10187396.1| lysyl-tRNA ligase [Acinetobacter sp. HA]
gi|388609593|gb|EIM38745.1| lysyl-tRNA ligase [Acinetobacter sp. HA]
Length = 509
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 218/449 (48%), Positives = 319/449 (71%), Gaps = 26/449 (5%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G++ SFI++QD +G +IQLY+ + + + K D+GDII +G +
Sbjct: 76 KVAGRVMLNRGSFIVIQDMTG-----RIQLYVPRKELDAEVLATIKGLDLGDIIAVEGYI 130
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L + + +L+TKSLRPLP+KF L++ E+KYR RY+DLI+NE TRK F+ R
Sbjct: 131 GRSGKGDLYVHIEQFELLTKSLRPLPDKFHGLTDTEVKYRKRYLDLIVNEETRKTFEIRA 190
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
++++ IR+F+ + +MEVETP++H PGGA A+PF THHN+L+M +FLRIAPELYLKRL+
Sbjct: 191 KVVAGIRNFLTEKRYMEVETPMMHVIPGGASARPFETHHNALDMPLFLRIAPELYLKRLV 250
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF ++FEIN+NFRNEG+S RHNPEFTMIEFY AY +Y LM+ TE+M++K+ +D +GT
Sbjct: 251 VGGFERVFEINRNFRNEGVSTRHNPEFTMIEFYQAYADYKDLMELTEQMLEKLALDILGT 310
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFL----KSELK-KINPKFN 293
T + Y + F F+K+++ +AI ++ PQ+ ++ ++ FL + ELK ++ P F
Sbjct: 311 TDVPYGEEVFSFKGPFKKISMFDAILEHNPQFTPENVGDRDFLAKYVQEELKEQVKPGFG 370
Query: 294 QKKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELF 353
K LQ ++FEET ETKL PT+IT YP E SPLAR+ N N +IT+RFE F
Sbjct: 371 LGK---------LQTIVFEETVETKLRQPTFITEYPAETSPLARR-NDHNPHITDRFEFF 420
Query: 354 IIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCG 413
I G E+ANGFSELNDP +Q+ RF+ Q+ K+ + E + ++D D+I ALEYG+PP +G G
Sbjct: 421 IGGRELANGFSELNDPIDQAERFQAQVAEKDAGDDE-AMHFDADFIEALEYGLPPTAGEG 479
Query: 414 IGVDRLIMLLTNSKNIRDVILFPHLRNEN 442
IG+DRL+M+ N+ +IRDVILFPH+R+++
Sbjct: 480 IGIDRLVMIFANAPSIRDVILFPHMRHKH 508
>gi|344207294|ref|YP_004792435.1| Lysyl-tRNA synthetase [Stenotrophomonas maltophilia JV3]
gi|343778656|gb|AEM51209.1| Lysyl-tRNA synthetase [Stenotrophomonas maltophilia JV3]
Length = 503
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 213/446 (47%), Positives = 306/446 (68%), Gaps = 21/446 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M KR+MGK SF +QD SG +IQL++ ++G + YT FK +D+GDII +G L +
Sbjct: 75 MAKRIMGKASFAQIQDESG-----RIQLFLQGAVLG-DAYTAFKGWDVGDIIAVEGGLTR 128
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+K S++L+TKSLRPLP+K+ L++ E +YR RY+DLI+ +R VF KR++I
Sbjct: 129 TKTGELSVKAESIRLLTKSLRPLPDKWHGLADVEQRYRQRYVDLIVTPESRAVFIKRSKI 188
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I ++R +++ DF+EVETP++H PGGA AKPF THHN+L++ ++LR+APELYLKRL +G
Sbjct: 189 IRAMRAWLDNRDFLEVETPMMHYIPGGAAAKPFTTHHNALDLDLYLRVAPELYLKRLTVG 248
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G +++EIN+NFRNEG+S RHNPEFTM+E Y AY Y +M TE +I+ + G T+
Sbjct: 249 GLERVYEINRNFRNEGVSTRHNPEFTMMELYEAYATYNEIMDLTEGVIRDVATAVNGGTE 308
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELK----KINPKFNQKK 296
+++ G +D +F + + EA++ + P+ + D ++ L + ++ P + K
Sbjct: 309 VEWDGAKIDLGPAFRRWRMDEAVRHHNPEISAADCTDRDALLRHCERLKIRVKPSYGWGK 368
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
+L L +FE T E L PT+IT++P E+SPLAR +N + T+RFELF+ G
Sbjct: 369 LL---------LEIFEATVEHTLIQPTFITDHPVEVSPLAR-ANDNDPGYTDRFELFVNG 418
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELNDPE+Q+ RF+ Q+ K + E + +YD DYI ALEYGM P G GIGV
Sbjct: 419 KELANGFSELNDPEDQAQRFQAQVAAKEGGDDE-AMHYDADYIRALEYGMAPTGGLGIGV 477
Query: 417 DRLIMLLTNSKNIRDVILFPHLRNEN 442
DRL+MLLT S +IRDV+LFP++R E
Sbjct: 478 DRLVMLLTGSSSIRDVLLFPYMRPEQ 503
>gi|418294346|ref|ZP_12906242.1| lysyl-tRNA synthetase [Pseudomonas stutzeri ATCC 14405 = CCUG
16156]
gi|379065725|gb|EHY78468.1| lysyl-tRNA synthetase [Pseudomonas stutzeri ATCC 14405 = CCUG
16156]
Length = 500
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 219/443 (49%), Positives = 313/443 (70%), Gaps = 17/443 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I F++LQD SG +IQ+Y++ + + K++D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGPFMVLQDMSG-----RIQVYVNRKTLPAEQVEAVKHFDLGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L + +SS++L+TKSLRPLP+KF L++ E +YR RY+DL++NE R+ F+ R+
Sbjct: 124 ARSGKGDLYVYMSSVRLLTKSLRPLPDKFHGLTDTEQRYRQRYVDLMVNEEVRETFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
+II+ IR F+ + DF+EVETP+L PGGA AKPF THHN+L+M MFLRIAPELYLKRL+
Sbjct: 184 KIIAHIRKFLAERDFLEVETPMLQTIPGGAAAKPFETHHNALDMPMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF ++FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 244 VGGFERVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQAVLGS 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I K+ P+ DL + ++ KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFVRLSVFDSILKFNPEITADDLNDLEKARALAKKAG-----AKLL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
+ LQ+M+FEE E KL PT+IT YP E+SPLAR+ N N N+T+RFELFI G E
Sbjct: 359 GHEGLGKLQVMIFEELVEHKLEQPTFITEYPFEVSPLARR-NDRNPNVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + ++D D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFHAQVADKDAGDDE-AMHFDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLRNE 441
L+MLLTNS +IRDVILFPH+R E
Sbjct: 477 LVMLLTNSPSIRDVILFPHMRPE 499
>gi|226951466|ref|ZP_03821930.1| lysyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
gi|226837759|gb|EEH70142.1| lysyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
Length = 508
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/449 (48%), Positives = 319/449 (71%), Gaps = 26/449 (5%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G++ SFI++QD +G +IQLY+ + + ++ K+ D+GDII A+G +
Sbjct: 76 KVAGRVMLNRGSFIVIQDMTG-----RIQLYVDRKGLPADVLETIKSLDLGDIIAAEGYI 130
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L + + + +L+TKSLRPLP+KF L++ E KYR RY+DLI+NE TRK F+ R
Sbjct: 131 GRSGKGDLYVHLEAFELLTKSLRPLPDKFHGLTDTEAKYRKRYLDLIVNEETRKTFEIRA 190
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
++++ IR F+ FMEVETP++H PGGA AKPF+THHN+L+M+++LRIAPELYLKRL+
Sbjct: 191 KVVAGIRAFLTNERFMEVETPMMHVIPGGASAKPFVTHHNALDMELYLRIAPELYLKRLV 250
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF ++FEIN+NFRNEG+S RHNPEFTMIEFY AY +Y LM+ TE M++K+ +D +GT
Sbjct: 251 VGGFERVFEINRNFRNEGVSTRHNPEFTMIEFYQAYADYKDLMELTENMLEKLAIDILGT 310
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFL----KSELK-KINPKFN 293
T + Y + F F+K+++ +AI ++ P + ++ ++ FL + LK K+ P F
Sbjct: 311 TDVPYGEEVYSFKGPFKKISMFDAILEHNPDFTPENVNDREFLAKFTQDVLKEKVKPGFG 370
Query: 294 QKKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELF 353
K LQ ++FEET ETKL PT+IT YP E SPLAR+ N +N +IT+RFE F
Sbjct: 371 LGK---------LQTIVFEETVETKLRQPTFITEYPAETSPLARR-NDDNPHITDRFEFF 420
Query: 354 IIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCG 413
I G E+ANGFSELNDP +Q+ RF+ Q+ K+ + E + +YD D+I ALEYG+PP +G G
Sbjct: 421 IGGRELANGFSELNDPIDQAERFQAQVAEKDAGDDE-AMHYDADFIEALEYGLPPTAGEG 479
Query: 414 IGVDRLIMLLTNSKNIRDVILFPHLRNEN 442
IG+DRL+ML N+ +IRDV+LFPH+R ++
Sbjct: 480 IGIDRLVMLFANAPSIRDVLLFPHMRRKD 508
>gi|449054019|ref|ZP_21732687.1| Lysyl-tRNA synthetase (class II) [Vibrio cholerae O1 str. Inaba
G4222]
gi|448266498|gb|EMB03725.1| Lysyl-tRNA synthetase (class II) [Vibrio cholerae O1 str. Inaba
G4222]
Length = 510
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/443 (49%), Positives = 310/443 (69%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM K F+++Q+TSG +IQ Y S E+ + L ++ DIGDIIG +G L K+
Sbjct: 78 RVMAKRGPFLVIQETSG-----RIQAYASKEV-QQELKDKYQGLDIGDIIGVQGALHKSG 131
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE++YR RY+DLI+NEN+R F R++++S
Sbjct: 132 KGDLYVNMEQFQLLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNENSRNAFIVRSKVMS 191
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM FMEVETP++H PGGA A+PFITHHN+L+M M+LRIAPELYLKRL++GGF
Sbjct: 192 AIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPMYLRIAPELYLKRLVVGGF 251
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
+++FEIN NFRNEG+SPRHNPEFTM+EFY AY +Y LM TE+++ + ++ +G+T +
Sbjct: 252 DRVFEINHNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLGSTSMP 311
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y ++F + ++++ +AIK Y P + +I D+QN+ + S K ++
Sbjct: 312 YGEHTVEFGGKYARMSMFDAIKHYNPNHAQIQALTEEDIQNRDLMVSIAKSVHVDVEPFW 371
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E KL PT+IT YP +ISPLAR+S+ +N T+RFE FI G
Sbjct: 372 TCGQLLEEI-----FGETAEPKLMQPTFITGYPADISPLARRSD-DNPFFTDRFEFFIGG 425
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND E+Q RFK Q++ K + E + +YD DYI ALE+G+PP +G GIG+
Sbjct: 426 REVANGFSELNDAEDQDARFKAQVEAKESGDDE-AMFYDADYITALEHGLPPTAGQGIGI 484
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL+MLLTN+ IRDVILFP +R
Sbjct: 485 DRLVMLLTNTHTIRDVILFPAMR 507
>gi|229588762|ref|YP_002870881.1| lysyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
gi|229360628|emb|CAY47486.1| lysyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
Length = 500
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 217/441 (49%), Positives = 315/441 (71%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + ++ K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLSEDTLASVKTWDMGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L ++++S++L+TKSLRPLP+K L++ E +YR RY+DLI+NE+ R+ F+ R+
Sbjct: 124 ARSGKGDLYVEMTSVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEDVRQTFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ + DF+EVETP+L PGGA AKPF THHN+L+++MFLRIAPELYLKRL+
Sbjct: 184 QVIAHIRSFLMQRDFLEVETPMLQTIPGGAAAKPFETHHNALDLEMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGS 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DL + ++ KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTADDLNDIDKARAIAKKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+ N +N N+T+RFELFI G E
Sbjct: 359 GFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDDNPNVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFMAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 477 LVMLLTNSPSIRDVILFPHMR 497
>gi|322514329|ref|ZP_08067382.1| lysine--tRNA ligase [Actinobacillus ureae ATCC 25976]
gi|322119783|gb|EFX91817.1| lysine--tRNA ligase [Actinobacillus ureae ATCC 25976]
Length = 500
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 226/447 (50%), Positives = 312/447 (69%), Gaps = 25/447 (5%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
MLKRVMGK SF +QD SG +IQLY++ + + + +Y D +D+GDI+G GTLF
Sbjct: 71 MLKRVMGKASFFTIQDVSG-----QIQLYVARDNLAEGVYADKVSMWDLGDIVGVAGTLF 125
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGEL+++ S ++L+TKSLRPLPNK Q L++QE +YR RY+DLI NE +R+ F R++
Sbjct: 126 KTKTGELTVRCSEVELLTKSLRPLPNKVQGLTDQETRYRQRYLDLISNEESRRTFMIRSK 185
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
++S IR F + DF+EVETP+L PGGA AKPFITHHN L++ M+LRIAPELYLKRL++
Sbjct: 186 VVSGIRQFFLEKDFIEVETPMLQVIPGGAAAKPFITHHNVLDVDMYLRIAPELYLKRLVV 245
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTMIE+Y AY +Y LM TE++++K+ +D +GTT
Sbjct: 246 GGFERVFELNRNFRNEGVSVRHNPEFTMIEYYQAYADYHDLMDNTEELLRKLAIDILGTT 305
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKS-ELKK-----INPKFN 293
+ Y + DF K FE++T+ +AI KY DL + F KS E+ K I +
Sbjct: 306 TVPYGEYVFDFGKPFERITMHDAIVKYGNGITREDLDS--FEKSVEIAKGLGIEIQKPWG 363
Query: 294 QKKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELF 353
++N +FEE E +L PT++ +P EISPLAR+ N EN +T+RFELF
Sbjct: 364 LGSVVN---------AIFEEVAEHQLIQPTFLMAHPAEISPLARR-NDENPEVTDRFELF 413
Query: 354 IIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCG 413
I G EI NGFSELND E+Q+ RF Q+ K+ + E + + D D++ ALE+G+PP +G G
Sbjct: 414 IGGREIGNGFSELNDAEDQAERFDAQVAAKDAGDDE-AMFKDEDFVVALEHGLPPTAGEG 472
Query: 414 IGVDRLIMLLTNSKNIRDVILFPHLRN 440
+G+DRL M+ N+ +IRDVILFP +R
Sbjct: 473 LGIDRLAMIFANAPSIRDVILFPAMRQ 499
>gi|343508551|ref|ZP_08745887.1| lysyl-tRNA synthetase [Vibrio ichthyoenteri ATCC 700023]
gi|342793259|gb|EGU29063.1| lysyl-tRNA synthetase [Vibrio ichthyoenteri ATCC 700023]
Length = 511
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 219/443 (49%), Positives = 309/443 (69%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
R+M K F+++Q+TSG IQ Y E+ K L + DIGDIIG KG L K+
Sbjct: 78 RIMAKRGPFLVIQETSG-----SIQAYADKEV-QKVLKEQYHGLDIGDIIGVKGALHKSG 131
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE++YR RY+DLI+NE++R FK R++++S
Sbjct: 132 KGDLYVNMEQYELLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSRNAFKVRSKLVS 191
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR FME FMEVETP++ PGGA A+PFITHHN+L+ +MFLRIAPELYLKRL++GGF
Sbjct: 192 AIRRFMESKSFMEVETPMMQVIPGGASARPFITHHNALDQQMFLRIAPELYLKRLVVGGF 251
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
++FEIN+NFRNEG+SPRHNPEFTMIEFY AY +Y LM TE+M+ + ++ +G T +
Sbjct: 252 ERVFEINRNFRNEGLSPRHNPEFTMIEFYMAYADYKDLMDLTEEMLSTVALEILGATAMP 311
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEID------LQNKLFLKSELKKINPKFNQKK 296
Y ++++F + ++T+++AIK Y P + +I +Q++ + + K ++ +
Sbjct: 312 YGDQMVEFGGQYARMTMLDAIKHYNPDHADIQALTEEGVQDRDAMVAIAKSLDIYVEKFW 371
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E +L PT+IT YP +ISPLAR+S+ +N T+RFE FI G
Sbjct: 372 TCGQLLEEI-----FGETAEPQLIQPTFITGYPADISPLARRSD-DNAFFTDRFEFFIGG 425
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND E+Q RFK+Q+D K+ + E + +YD DYI ALE+G+PP +G GIG+
Sbjct: 426 REVANGFSELNDAEDQDARFKSQVDAKDAGDDE-AMFYDADYITALEHGLPPTAGQGIGI 484
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL ML TN+ IRDVILFP +R
Sbjct: 485 DRLAMLFTNTHTIRDVILFPAMR 507
>gi|325278150|ref|ZP_08143659.1| lysyl-tRNA synthetase [Pseudomonas sp. TJI-51]
gi|324096725|gb|EGB95062.1| lysyl-tRNA synthetase [Pseudomonas sp. TJI-51]
Length = 500
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 218/441 (49%), Positives = 312/441 (70%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + + K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLPEETLAAVKTWDLGDIISAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L +++++++L+TKSLRPLP+K L++ E +YR RY+DL++NE TR F+ R+
Sbjct: 124 ARSGKGDLYVEMTNVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLMVNEETRHTFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+IS IR F+ + DF+EVETP+L PGGA AKPF THHN+L+M MFLRIAPELYLKRL+
Sbjct: 184 QVISHIRKFLIERDFLEVETPMLQTIPGGAAAKPFETHHNALDMAMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYRDNMDLTEELFRELAQLVLGS 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DLQ+ + KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFARLSVFDSILKYNPELTAADLQDVDRARDIAKKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
+ LQ+M+FEE E KL P +IT YP E+SPLAR+ N +N +T+RFELFI G E
Sbjct: 359 GHEGLGKLQVMIFEELVEHKLEQPHFITEYPFEVSPLARR-NDDNPAVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFLAQVAEKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 477 LVMLLTNSPSIRDVILFPHMR 497
>gi|330447414|ref|ZP_08311063.1| lysyl-tRNA synthetase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328491605|dbj|GAA05560.1| lysyl-tRNA synthetase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 502
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/446 (49%), Positives = 311/446 (69%), Gaps = 20/446 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
R+M K F+ +QD SG +IQ Y S ++ K L + DIGDIIG KG L K+
Sbjct: 68 RIMAKRGPFLAIQDVSG-----RIQAYASKDV-QKELKEKYSGLDIGDIIGIKGALHKSG 121
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE++YR RY+DLI+N+++R F R++++S
Sbjct: 122 KGDLYVNMDEYELLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNDDSRHAFVVRSKVVS 181
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM FMEVETP++H PGGA A+PFITHHN+L++ M+LR+APELYLKRL++GGF
Sbjct: 182 AIRNFMVSKGFMEVETPMMHVIPGGATARPFITHHNALDIDMYLRVAPELYLKRLVVGGF 241
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
++FEIN+NFRNEG+SPRHNPEFTM+EFY AY +Y LM TE+M+ I MD +G++K+
Sbjct: 242 ERVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYNDLMDLTEEMLSSIAMDVLGSSKMP 301
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEID------LQNKLFLKSELKKINPKFNQKK 296
Y ++F+ + ++++++AIKKY P + EI + ++ + K ++
Sbjct: 302 YGEYEVEFAGPYARMSMLDAIKKYNPDHAEIQALTYEGVADRELMVKIAKSVHVDVEDFW 361
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E +L PT+IT YP +ISPLAR+ N EN IT+RFE FI G
Sbjct: 362 TCGQLLEEI-----FGETAEPQLMQPTFITEYPADISPLARR-NDENPFITDRFEFFIGG 415
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND ++Q RFK Q+D K+ + E + YYD DYI ALE+G+PP +G GIG+
Sbjct: 416 REVANGFSELNDAQDQDQRFKAQVDAKDAGDDE-AMYYDADYITALEHGLPPTAGQGIGI 474
Query: 417 DRLIMLLTNSKNIRDVILFPHLRNEN 442
DRL+MLLTN+ IRDVILFP +R ++
Sbjct: 475 DRLVMLLTNTHTIRDVILFPAMRPQS 500
>gi|261250317|ref|ZP_05942893.1| lysyl-tRNA synthetase (class II) [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|417954616|ref|ZP_12597648.1| lysyl-tRNA synthetase [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|260939433|gb|EEX95419.1| lysyl-tRNA synthetase (class II) [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|342814892|gb|EGU49823.1| lysyl-tRNA synthetase [Vibrio orientalis CIP 102891 = ATCC 33934]
Length = 510
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 217/443 (48%), Positives = 315/443 (71%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM K F+ +Q+TSG +IQ Y + ++ K L ++ DIGDIIG KG L K+
Sbjct: 78 RVMAKRGPFLAIQETSG-----RIQAYAAKDV-QKELKEKYQGLDIGDIIGVKGALHKSG 131
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + S +L+TK+LRPLP KF L++QE++YR RY+DLI+N+++R+ F R++++S
Sbjct: 132 KGDLYVNMESYELLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNQDSREAFIIRSKLVS 191
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM ++EVETP++H PGGA A+PFITHHN+L++ M+LR+APELYLKRL++GGF
Sbjct: 192 AIRNFMSSKGYLEVETPMMHVIPGGATARPFITHHNALDIDMYLRVAPELYLKRLVVGGF 251
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
+++FEIN+NFRNEG+SPRHNPEFTM+EFY AY++Y LM TE+M+ + MD +G+T +
Sbjct: 252 DRVFEINRNFRNEGLSPRHNPEFTMMEFYQAYSDYKDLMDLTEEMLSTVAMDVLGSTSMP 311
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y ++F + +L++ +AIK+Y P++ EI DLQ++ + + K ++ +
Sbjct: 312 YGDETVEFGGQYARLSMFDAIKQYNPEHAEIQALTEVDLQDRDKMVAIAKSVHVEVETFW 371
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E +L PT+IT YP +ISPLAR+S+ +N T+RFE FI G
Sbjct: 372 TCGQLLEEI-----FGETAEPQLIQPTFITGYPADISPLARRSD-DNPFFTDRFEFFIGG 425
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND ++Q RFK Q++ K+ + E + YYD DYI ALE+G+PP +G GIG+
Sbjct: 426 REVANGFSELNDAQDQDERFKAQVNAKDAGDDE-AMYYDADYITALEHGLPPTAGQGIGI 484
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL ML TN+ IRDVILFP +R
Sbjct: 485 DRLAMLFTNTHTIRDVILFPAMR 507
>gi|194365604|ref|YP_002028214.1| lysyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
gi|194348408|gb|ACF51531.1| lysyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
Length = 503
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 213/446 (47%), Positives = 306/446 (68%), Gaps = 21/446 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M KR+MGK SF +QD SG +IQL++ ++G + YT FK +D+GDII +G L +
Sbjct: 75 MAKRIMGKASFAQIQDESG-----RIQLFLQGTVLG-DAYTAFKGWDVGDIIAVEGGLTR 128
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+K S++L+TKSLRPLP+K+ L++ E +YR RY+DLI+ +R VF KR++I
Sbjct: 129 TKTGELSVKAESIRLLTKSLRPLPDKWHGLADVEQRYRQRYVDLIVTPESRAVFIKRSKI 188
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I ++R +++ DF+EVETP++H PGGA AKPF THHN+L++ ++LR+APELYLKRL +G
Sbjct: 189 IRAMRAWLDNRDFLEVETPMMHYIPGGAAAKPFTTHHNALDLDLYLRVAPELYLKRLTVG 248
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G +++EIN+NFRNEG+S RHNPEFTM+E Y AY Y +M TE +I+ + G T+
Sbjct: 249 GLERVYEINRNFRNEGVSTRHNPEFTMMELYEAYATYNEIMDLTEGVIRDVATTVNGGTE 308
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELK----KINPKFNQKK 296
+++ G +D +F + + EA++ + P+ + D ++ L + ++ P + K
Sbjct: 309 VEWDGAKIDLGPAFRRWRMDEAVRHHNPEISAADCTDREALLRHCERLKIRVKPSYGWGK 368
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
+L L +FE T E L PT+IT++P E+SPLAR +N + T+RFELF+ G
Sbjct: 369 LL---------LEIFEATVEHTLIQPTFITDHPVEVSPLAR-ANDNDPGYTDRFELFVNG 418
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELNDPE+Q+ RF+ Q+ K + E + +YD DYI ALEYGM P G GIGV
Sbjct: 419 KELANGFSELNDPEDQAQRFQAQVAAKEGGDDE-AMHYDADYIRALEYGMAPTGGLGIGV 477
Query: 417 DRLIMLLTNSKNIRDVILFPHLRNEN 442
DRL+MLLT S +IRDV+LFP++R E
Sbjct: 478 DRLVMLLTGSSSIRDVLLFPYMRPEQ 503
>gi|359428260|ref|ZP_09219296.1| lysyl-tRNA synthetase [Acinetobacter sp. NBRC 100985]
gi|358236276|dbj|GAB00835.1| lysyl-tRNA synthetase [Acinetobacter sp. NBRC 100985]
Length = 508
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 218/448 (48%), Positives = 315/448 (70%), Gaps = 24/448 (5%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G++ SFI++QD +G +IQLY+ + + ++ K+ D+GDII A+G +
Sbjct: 76 KVAGRVMLNRGSFIVIQDMTG-----RIQLYVDRKGLPVDVLETIKSLDLGDIIAAEGYI 130
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L + + +L+TKSLRPLP+KF L++ E KYR RY+DLI+NE TRK F+ R
Sbjct: 131 GRSGKGDLYVHLEGFELLTKSLRPLPDKFHGLTDTEAKYRKRYLDLIVNEETRKTFEIRA 190
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+++ IR F+ FMEVETP++H PGGA AKPF+THHN+L+M+++LRIAPELYLKRL+
Sbjct: 191 QVVAGIRAFLSNERFMEVETPMMHVIPGGASAKPFVTHHNALDMELYLRIAPELYLKRLV 250
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF ++FEIN+NFRNEG+S RHNPEFTMIEFY AY +Y LM TE M++K+ +D +G+
Sbjct: 251 VGGFERVFEINRNFRNEGVSTRHNPEFTMIEFYQAYADYKDLMALTENMLEKLAVDILGS 310
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y + F F+K+++ +AI ++ P + ++ ++ FL KF Q +
Sbjct: 311 TDVPYGDEVYSFKGPFKKISMFDAILEHNPDFTPENVNDREFLA--------KFTQDVLK 362
Query: 299 NNLKKDI----LQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFI 354
+K LQ ++FEET ETKL PT+IT YP E SPLAR+ N +N +IT+RFE FI
Sbjct: 363 EQVKPGFGLGKLQTIVFEETVETKLRQPTFITEYPAETSPLARR-NDDNPHITDRFEFFI 421
Query: 355 IGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGI 414
G E+ANGFSELNDP +Q+ RF+ Q+ K+ + E + +YD D+I ALEYG+PP +G GI
Sbjct: 422 GGRELANGFSELNDPIDQAERFQAQVAEKDAGDDE-AMHYDADFIEALEYGLPPTAGEGI 480
Query: 415 GVDRLIMLLTNSKNIRDVILFPHLRNEN 442
G+DRL+ML N+ +IRDV+LFPH+R ++
Sbjct: 481 GIDRLVMLFANAPSIRDVLLFPHMRRKD 508
>gi|56707357|ref|YP_169253.1| lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
SCHU S4]
gi|110669827|ref|YP_666384.1| lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
FSC198]
gi|254370939|ref|ZP_04986944.1| lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
FSC033]
gi|254874191|ref|ZP_05246901.1| lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
MA00-2987]
gi|379716557|ref|YP_005304893.1| lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
TIGB03]
gi|379725240|ref|YP_005317426.1| lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
TI0902]
gi|421754808|ref|ZP_16191772.1| lysyl-tRNA ligase [Francisella tularensis subsp. tularensis
80700075]
gi|56603849|emb|CAG44825.1| Lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
SCHU S4]
gi|110320160|emb|CAL08208.1| Lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
FSC198]
gi|151569182|gb|EDN34836.1| lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
FSC033]
gi|254840190|gb|EET18626.1| lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
MA00-2987]
gi|377826689|gb|AFB79937.1| Lysyl-tRNA synthetase (class II) [Francisella tularensis subsp.
tularensis TI0902]
gi|377828234|gb|AFB78313.1| Lysyl-tRNA synthetase (class II) [Francisella tularensis subsp.
tularensis TIGB03]
gi|409090288|gb|EKM90309.1| lysyl-tRNA ligase [Francisella tularensis subsp. tularensis
80700075]
Length = 576
Score = 456 bits (1173), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/442 (49%), Positives = 313/442 (70%), Gaps = 13/442 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNY-DIGDIIGAKGTLF 59
+L+RVMGK SFI LQD +G +IQ+Y+ + Y FKN D+GDI+G GT+F
Sbjct: 147 VLRRVMGKASFITLQDYTG-----RIQVYLKKSDLPDGQYETFKNLCDLGDIVGITGTMF 201
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KTNTGELS++ + +++TK++RPLP+KF L++QE++YR RY+DLI NE R+VFK R++
Sbjct: 202 KTNTGELSVEANHFEILTKAIRPLPDKFHGLADQEMRYRQRYVDLITNEKAREVFKVRSK 261
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR++ ++ DFMEVETP++H GG AKPF THHN+L+M ++LRIAPELYLKRL++
Sbjct: 262 VVNFIRNYFDRLDFMEVETPMMHVLQGGGAAKPFKTHHNALDMPLYLRIAPELYLKRLVV 321
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF +++EIN+NFRNEG+S RHNPEFTM+EFY AY +Y LM TE M+ K++ + IG+
Sbjct: 322 GGFERVYEINRNFRNEGVSSRHNPEFTMLEFYMAYADYNDLMDLTEDMLSKLVQEVIGSE 381
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++Y ++F +E+++++++I KY + DL K +K+ K L
Sbjct: 382 ILEYGEYKINFGGKYERISMVDSIVKYNDDITKEDLVTFESAKKIAEKLKIKVEAYHELG 441
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+L +I FEET E +L PT+IT+YP +SPLAR+ + N T+RFE FI E+
Sbjct: 442 HLINEI-----FEETVEHQLIQPTFITDYPAVVSPLARRQD-GNPEFTDRFEFFIGAREV 495
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
ANGFSELND E+Q+ RF+ Q++ + E + YD DYI ALEYGMPP +G GIG+DRL
Sbjct: 496 ANGFSELNDAEDQAERFRKQVEAAASGDDE-AMPYDKDYIRALEYGMPPTAGQGIGIDRL 554
Query: 420 IMLLTNSKNIRDVILFPHLRNE 441
+M LTNS++IRDVILFPH++ E
Sbjct: 555 VMYLTNSQSIRDVILFPHMKPE 576
>gi|294650990|ref|ZP_06728330.1| lysine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
gi|292823091|gb|EFF81954.1| lysine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
Length = 508
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 220/449 (48%), Positives = 319/449 (71%), Gaps = 26/449 (5%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G++ SFI++QD +G +IQLY+ + + ++ K+ D+GDII A+G +
Sbjct: 76 KVAGRVMLNRGSFIVIQDMTG-----RIQLYVDRKGLPVDVLETIKSLDLGDIIAAEGYI 130
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L + + + +L+TKSLRPLP+KF L++ E KYR RY+DLI+NE TRK F+ R
Sbjct: 131 GRSGKGDLYVHLEAFELLTKSLRPLPDKFHGLTDTEAKYRKRYLDLIVNEETRKTFEIRA 190
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
++++ IR F+ FMEVETP++H PGGA AKPF+THHN+L+M+++LRIAPELYLKRL+
Sbjct: 191 KVVAGIRAFLTNERFMEVETPMMHVIPGGASAKPFVTHHNALDMELYLRIAPELYLKRLV 250
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF ++FEIN+NFRNEG+S RHNPEFTMIEFY AY +Y LM+ TE M++K+ +D +GT
Sbjct: 251 VGGFERVFEINRNFRNEGVSTRHNPEFTMIEFYQAYADYKDLMELTENMLEKLAIDILGT 310
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFL----KSELK-KINPKFN 293
T + Y + F F+K+++ +AI ++ P + ++ ++ FL + LK K+ P F
Sbjct: 311 TDVPYGEEVYSFKGPFKKISMFDAILEHNPDFTPENVNDREFLAKFTQDVLKEKVKPGFG 370
Query: 294 QKKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELF 353
K LQ ++FEET ETKL PT+IT YP E SPLAR+ N +N +IT+RFE F
Sbjct: 371 LGK---------LQTIVFEETVETKLRQPTFITEYPAETSPLARR-NDDNPHITDRFEFF 420
Query: 354 IIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCG 413
I G E+ANGFSELNDP +Q+ RF+ Q+ K+ + E + +YD D+I ALEYG+PP +G G
Sbjct: 421 IGGRELANGFSELNDPIDQAERFQAQVAEKDAGDDE-AMHYDADFIEALEYGLPPTAGEG 479
Query: 414 IGVDRLIMLLTNSKNIRDVILFPHLRNEN 442
IG+DRL+ML N+ +IRDV+LFPH+R ++
Sbjct: 480 IGIDRLVMLFANAPSIRDVLLFPHMRRKD 508
>gi|152984795|ref|YP_001346822.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
gi|166229817|sp|A6V187.1|SYK_PSEA7 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|150959953|gb|ABR81978.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
Length = 501
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 218/441 (49%), Positives = 313/441 (70%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SFI+LQD+S ++Q+Y++ + + + + K +D+GDIIGA+G L
Sbjct: 70 KVAGRIMLNRGSFIVLQDSSE-----RLQVYVNRKTLPEETLAEIKTWDLGDIIGAEGVL 124
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L + ++S++L+TKSLRPLP+K L++ E +YR RY+DL++NE TR F+ R+
Sbjct: 125 ARSGKGDLYVDMTSVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLMVNEETRHTFRVRS 184
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ + F+EVETP+L PGGA AKPF THHN+L+M MFLRIAPELYLKRL+
Sbjct: 185 QVIAHIRRFLSERGFLEVETPMLQTIPGGAAAKPFETHHNALDMAMFLRIAPELYLKRLV 244
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 245 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQAVLGS 304
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY PQ DL + ++ +K K+L
Sbjct: 305 TDVPYGDKVFHFGEPFVRLSVYDSILKYNPQITPADLNDVEKARAIARKAG-----AKVL 359
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
+ LQ+M+FEE E KL P +IT YP E+SPLAR+ N E+ ++T+RFELFI G E
Sbjct: 360 GHEGLGKLQVMIFEELVEHKLEQPHFITRYPFEVSPLARR-NDEDPSVTDRFELFIGGRE 418
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + +YD D+I+ALEYGMPP +G GIG+DR
Sbjct: 419 IANAYSELNDAEDQAERFMLQVKEKDAGDDE-AMHYDADFINALEYGMPPTAGEGIGIDR 477
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 478 LVMLLTNSPSIRDVILFPHMR 498
>gi|387885885|ref|YP_006316184.1| lysyl-tRNA synthetase [Francisella noatunensis subsp. orientalis
str. Toba 04]
gi|386870701|gb|AFJ42708.1| lysyl-tRNA synthetase [Francisella noatunensis subsp. orientalis
str. Toba 04]
Length = 560
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 224/442 (50%), Positives = 317/442 (71%), Gaps = 13/442 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNY-DIGDIIGAKGTLF 59
+L+RVMGK SFI LQD SG +IQ+Y+ + + Y FKN D+GDI+G GT+F
Sbjct: 131 VLRRVMGKASFITLQDYSG-----RIQVYLKKSDLPEGQYETFKNLCDLGDIVGITGTMF 185
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KTNTGELS++ S +++TK++RPLP+KF L++QE++YR RY+DLI NE R+VFK R++
Sbjct: 186 KTNTGELSVEASHFEILTKAIRPLPDKFHGLADQEMRYRQRYVDLITNEKAREVFKVRSK 245
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
++S IR++ +K DFMEVETP++H GGA AKPF THHN+L+M ++LRIAPELYLKRL++
Sbjct: 246 VVSFIRNYFDKLDFMEVETPMMHVLQGGAAAKPFKTHHNALDMPLYLRIAPELYLKRLVV 305
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GG +++EIN+NFRNEG+S RHNPEFTM+EFY AY +Y LM TE M+ K++ + +G+
Sbjct: 306 GGLERVYEINRNFRNEGVSSRHNPEFTMLEFYMAYADYNDLMDLTEDMLSKLVQEVMGSE 365
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++Y ++F +E+++++++I KY + DL K+ KK+ K L
Sbjct: 366 ILEYGEYKINFGGKYERISMVDSIVKYNDDITKEDLATFESAKALAKKLKIKVEACHELG 425
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+L +I FEET E +L +PT+IT+YP +SPLAR+ + N+ T+RFE F+ EI
Sbjct: 426 HLINEI-----FEETVEHQLIHPTFITDYPAVVSPLARRQD-GNSEFTDRFEFFVGAREI 479
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
ANGFSELND E+Q+ RF+ Q++ + E + YD DYI ALEYGMPP +G GIG+DRL
Sbjct: 480 ANGFSELNDAEDQAERFRKQVEAAASGDDE-AMPYDKDYIRALEYGMPPTAGQGIGIDRL 538
Query: 420 IMLLTNSKNIRDVILFPHLRNE 441
+M LTNS++IRDVILFPH++ E
Sbjct: 539 VMYLTNSQSIRDVILFPHMKPE 560
>gi|262373049|ref|ZP_06066328.1| lysyl-tRNA synthetase [Acinetobacter junii SH205]
gi|262313074|gb|EEY94159.1| lysyl-tRNA synthetase [Acinetobacter junii SH205]
Length = 523
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 217/448 (48%), Positives = 316/448 (70%), Gaps = 24/448 (5%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G++ SF+++QD +G +IQLY+ + + ++ K+ D+GDII A+G +
Sbjct: 91 KVAGRVMLNRGSFMVIQDMTG-----RIQLYVDRKGLAADILETIKSLDLGDIIAAEGYI 145
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L + + +L+TKSLRPLP+KF L++ E KYR RY+DLI+NE TRK F+ R
Sbjct: 146 GRSGKGDLYVHLEGFELLTKSLRPLPDKFHGLTDTEAKYRKRYLDLIVNEETRKTFEIRA 205
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
++++ IR F+ FMEVETP++H PGGA AKPF+THHN+L+M+++LRIAPELYLKRL+
Sbjct: 206 KVVAGIRAFLTNERFMEVETPMMHVIPGGASAKPFVTHHNALDMELYLRIAPELYLKRLV 265
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF ++FEIN+NFRNEG+S RHNPEFTMIEFY AY +Y LM TE M++K+ +D +GT
Sbjct: 266 VGGFERVFEINRNFRNEGVSTRHNPEFTMIEFYQAYADYKDLMALTENMLEKLAIDILGT 325
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y + F F+K+++ +AI ++ P + ++ ++ FL KF Q+ +
Sbjct: 326 TDVPYGEEVYSFKGPFKKISMFDAILEHNPDFTPENVNDRDFLA--------KFTQEVLK 377
Query: 299 NNLKKDI----LQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFI 354
+K LQ ++FEET ETKL PT+IT YP E SPLAR+ N +N +IT+RFE FI
Sbjct: 378 EQVKPGFGLGKLQTIVFEETVETKLRQPTFITEYPAETSPLARR-NDDNPHITDRFEFFI 436
Query: 355 IGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGI 414
G E+ANGFSELNDP +Q+ RF+ Q+ K+ + E + +YD D+I ALEYG+PP +G GI
Sbjct: 437 GGRELANGFSELNDPIDQAERFQAQVAEKDAGDDE-AMHYDADFIEALEYGLPPTAGEGI 495
Query: 415 GVDRLIMLLTNSKNIRDVILFPHLRNEN 442
G+DRL+ML N+ +IRDV+LFPH+R ++
Sbjct: 496 GIDRLVMLFANAPSIRDVLLFPHMRRKD 523
>gi|385793954|ref|YP_005830360.1| lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
NE061598]
gi|282158489|gb|ADA77880.1| Lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
NE061598]
Length = 560
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 220/442 (49%), Positives = 313/442 (70%), Gaps = 13/442 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNY-DIGDIIGAKGTLF 59
+L+RVMGK SFI LQD +G +IQ+Y+ + Y FKN D+GDI+G GT+F
Sbjct: 131 VLRRVMGKASFITLQDYTG-----RIQVYLKKSDLPDGQYETFKNLCDLGDIVGITGTMF 185
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KTNTGELS++ + +++TK++RPLP+KF L++QE++YR RY+DLI NE R+VFK R++
Sbjct: 186 KTNTGELSVEANHFEILTKAIRPLPDKFHGLADQEMRYRQRYVDLITNEKAREVFKVRSK 245
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR++ ++ DFMEVETP++H GG AKPF THHN+L+M ++LRIAPELYLKRL++
Sbjct: 246 VVNFIRNYFDRLDFMEVETPMMHVLQGGGAAKPFKTHHNALDMPLYLRIAPELYLKRLVV 305
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF +++EIN+NFRNEG+S RHNPEFTM+EFY AY +Y LM TE M+ K++ + IG+
Sbjct: 306 GGFERVYEINRNFRNEGVSSRHNPEFTMLEFYMAYADYNDLMDLTEDMLSKLVQEVIGSE 365
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++Y ++F +E+++++++I KY + DL K +K+ K L
Sbjct: 366 ILEYGEYKINFGGKYERISMVDSIVKYNDDITKEDLVTFESAKKIAEKLKIKVEAYHELG 425
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+L +I FEET E +L PT+IT+YP +SPLAR+ + N T+RFE FI E+
Sbjct: 426 HLINEI-----FEETVEHQLIQPTFITDYPAVVSPLARRQD-GNPEFTDRFEFFIGAREV 479
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
ANGFSELND E+Q+ RF+ Q++ + E + YD DYI ALEYGMPP +G GIG+DRL
Sbjct: 480 ANGFSELNDAEDQAERFRKQVEAAASGDDE-AMPYDKDYIRALEYGMPPTAGQGIGIDRL 538
Query: 420 IMLLTNSKNIRDVILFPHLRNE 441
+M LTNS++IRDVILFPH++ E
Sbjct: 539 VMYLTNSQSIRDVILFPHMKPE 560
>gi|190574184|ref|YP_001972029.1| lysyl-tRNA synthetase [Stenotrophomonas maltophilia K279a]
gi|386718405|ref|YP_006184731.1| lysyl-tRNA synthetase [Stenotrophomonas maltophilia D457]
gi|190012106|emb|CAQ45729.1| putative lysyl-tRNA synthetase [Stenotrophomonas maltophilia K279a]
gi|384077967|emb|CCH12556.1| Lysyl-tRNA synthetase (class II) [Stenotrophomonas maltophilia
D457]
Length = 503
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 213/446 (47%), Positives = 306/446 (68%), Gaps = 21/446 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M KR+MGK SF +QD SG +IQL++ ++G + YT FK +D+GDII +G L +
Sbjct: 75 MAKRIMGKASFAQIQDESG-----RIQLFLQGAVLG-DAYTAFKGWDVGDIIAVEGGLTR 128
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+K S++L+TKSLRPLP+K+ L++ E +YR RY+DLI+ +R VF KR++I
Sbjct: 129 TKTGELSVKAESIRLLTKSLRPLPDKWHGLADVEQRYRQRYVDLIVTPESRAVFIKRSKI 188
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I ++R +++ DF+EVETP++H PGGA AKPF THHN+L++ ++LR+APELYLKRL +G
Sbjct: 189 IRAMRAWLDNRDFLEVETPMMHYIPGGAAAKPFTTHHNALDLDLYLRVAPELYLKRLTVG 248
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G +++EIN+NFRNEG+S RHNPEFTM+E Y AY Y +M TE +I+ + G T+
Sbjct: 249 GLERVYEINRNFRNEGVSTRHNPEFTMMELYEAYATYNEIMDLTEGVIRDVAKAVNGGTE 308
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELK----KINPKFNQKK 296
+++ G +D +F + + EA++ + P+ + D ++ L + ++ P + K
Sbjct: 309 VEWDGAKIDLGPAFRRWRMDEAVRHHNPEISAADCTDRDALLRHCERLKIRVKPSYGWGK 368
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
+L L +FE T E L PT+IT++P E+SPLAR +N + T+RFELF+ G
Sbjct: 369 LL---------LEIFEATVEHTLIQPTFITDHPVEVSPLAR-ANDNDPGYTDRFELFVNG 418
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELNDPE+Q+ RF+ Q+ K + E + +YD DYI ALEYGM P G GIGV
Sbjct: 419 KELANGFSELNDPEDQAQRFQAQVAAKEGGDDE-AMHYDADYIRALEYGMAPTGGLGIGV 477
Query: 417 DRLIMLLTNSKNIRDVILFPHLRNEN 442
DRL+MLLT S +IRDV+LFP++R E
Sbjct: 478 DRLVMLLTGSSSIRDVLLFPYMRPEQ 503
>gi|418589507|ref|ZP_13153429.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa MPAO1/P2]
gi|375051741|gb|EHS44207.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa MPAO1/P2]
Length = 501
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 218/441 (49%), Positives = 312/441 (70%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SFI+LQD+S ++Q+Y++ + + + + K +D+GDIIGA+G L
Sbjct: 70 KVAGRIMLNRGSFIVLQDSSE-----RLQVYVNRKTLPEETLAEIKTWDLGDIIGAEGVL 124
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L + ++S++L+TKSLRPLP+K L++ E +YR RY+DL++NE R F+ R+
Sbjct: 125 ARSGKGDLYVDMTSVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLMVNEEXRHTFRVRS 184
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ + F+EVETP+L PGGA AKPF THHN+L+M MFLRIAPELYLKRL+
Sbjct: 185 QVIAHIRRFLSERGFLEVETPMLQTIPGGAAAKPFETHHNALDMAMFLRIAPELYLKRLV 244
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +GT
Sbjct: 245 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQSVLGT 304
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DL + ++ KK K+L
Sbjct: 305 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPEITAADLNDVEKARAIAKKAG-----AKVL 359
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
+ LQ+M+FEE E KL P +IT YP E+SPLAR+ N E+ ++T+RFELFI G E
Sbjct: 360 GHEGLGKLQVMIFEELVEHKLEQPHFITRYPFEVSPLARR-NDEDPSVTDRFELFIGGRE 418
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + +YD D+I+ALEYGMPP +G GIG+DR
Sbjct: 419 IANAYSELNDAEDQAERFMLQVKEKDAGDDE-AMHYDADFINALEYGMPPTAGEGIGIDR 477
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 478 LVMLLTNSPSIRDVILFPHMR 498
>gi|456735761|gb|EMF60487.1| Lysyl-tRNA synthetase (class II) [Stenotrophomonas maltophilia
EPM1]
Length = 503
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 213/446 (47%), Positives = 306/446 (68%), Gaps = 21/446 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M KR+MGK SF +QD SG +IQL++ ++G + YT FK +D+GDII +G L +
Sbjct: 75 MAKRIMGKASFAQIQDESG-----RIQLFLQGAVLG-DAYTAFKGWDVGDIIAVEGGLTR 128
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+K S++L+TKSLRPLP+K+ L++ E +YR RY+DLI+ +R VF KR++I
Sbjct: 129 TKTGELSVKAESIRLLTKSLRPLPDKWHGLADVEQRYRQRYVDLIVTPESRAVFIKRSKI 188
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I ++R +++ DF+EVETP++H PGGA AKPF THHN+L++ ++LR+APELYLKRL +G
Sbjct: 189 IRAMRAWLDNRDFLEVETPMMHYIPGGAAAKPFTTHHNALDLDLYLRVAPELYLKRLTVG 248
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G +++EIN+NFRNEG+S RHNPEFTM+E Y AY Y +M TE +I+ + G T+
Sbjct: 249 GLERVYEINRNFRNEGVSTRHNPEFTMMELYEAYATYNEIMDLTEGVIRDVAKAVNGGTE 308
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELK----KINPKFNQKK 296
+++ G +D +F + + EA++ + P+ + D ++ L + ++ P + K
Sbjct: 309 VEWDGAKIDLGPAFRRWRMDEAVRHHNPEISAADCTDRDALLRHCERLKIRVKPSYGWGK 368
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
+L L +FE T E L PT+IT++P E+SPLAR +N + T+RFELF+ G
Sbjct: 369 LL---------LEIFEATVEHTLIQPTFITDHPVEVSPLAR-ANDNDPGYTDRFELFVNG 418
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELNDPE+Q+ RF+ Q+ K + E + +YD DYI ALEYGM P G GIGV
Sbjct: 419 KELANGFSELNDPEDQAQRFQAQVAAKEGGDDE-AMHYDADYIRALEYGMAPTGGLGIGV 477
Query: 417 DRLIMLLTNSKNIRDVILFPHLRNEN 442
DRL+MLLT S +IRDV+LFP++R E
Sbjct: 478 DRLVMLLTGSSSIRDVLLFPYMRPEQ 503
>gi|148549432|ref|YP_001269534.1| lysyl-tRNA synthetase [Pseudomonas putida F1]
gi|395445076|ref|YP_006385329.1| lysyl-tRNA synthetase [Pseudomonas putida ND6]
gi|397695624|ref|YP_006533507.1| Lysyl-tRNA synthetase [Pseudomonas putida DOT-T1E]
gi|421522688|ref|ZP_15969329.1| lysyl-tRNA ligase [Pseudomonas putida LS46]
gi|166229819|sp|A5W890.1|SYK_PSEP1 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|148513490|gb|ABQ80350.1| lysyl-tRNA synthetase [Pseudomonas putida F1]
gi|388559073|gb|AFK68214.1| lysyl-tRNA synthetase [Pseudomonas putida ND6]
gi|397332354|gb|AFO48713.1| Lysyl-tRNA synthetase [Pseudomonas putida DOT-T1E]
gi|402753788|gb|EJX14281.1| lysyl-tRNA ligase [Pseudomonas putida LS46]
Length = 500
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 218/441 (49%), Positives = 312/441 (70%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + + K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLPEETLAAVKTWDLGDIISAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L +++++++L+TKSLRPLP+K L++ E +YR RY+DL++NE TR F+ R+
Sbjct: 124 ARSGKGDLYVEMTNVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLMVNEETRHTFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+IS IR F+ + DF+EVETP+L PGGA AKPF THHN+L+M MFLRIAPELYLKRL+
Sbjct: 184 QVISHIRKFLIERDFLEVETPMLQTIPGGAAAKPFETHHNALDMAMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYRDNMDLTEELFRELAQLVLGS 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DLQ+ + KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTAADLQDVDRAREIAKKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
+ LQ+M+FEE E KL P +IT YP E+SPLAR+ N +N +T+RFELFI G E
Sbjct: 359 GHEGLGKLQVMIFEELVEHKLEQPHFITEYPFEVSPLARR-NDDNPAVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFLAQVAEKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 477 LVMLLTNSPSIRDVILFPHMR 497
>gi|374620323|ref|ZP_09692857.1| lysyl-tRNA synthetase (class II) [gamma proteobacterium HIMB55]
gi|374303550|gb|EHQ57734.1| lysyl-tRNA synthetase (class II) [gamma proteobacterium HIMB55]
Length = 496
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 214/432 (49%), Positives = 309/432 (71%), Gaps = 12/432 (2%)
Query: 10 SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTNTGELSIK 69
+F+++QD G D+ IQLYI + + + K++D+GDI+ + G L K+ G+L I
Sbjct: 77 AFLLIQD--GSDA---IQLYIDRKGLSAEVLEAIKSWDLGDIVASSGVLCKSGKGDLYIN 131
Query: 70 VSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIISSIRHFME 129
+ + +L+TK+LRPLP+K+ LS+QE +YR RY+DLI N R+ F+ R+++I+ IR F++
Sbjct: 132 METAQLLTKALRPLPDKYHGLSDQETRYRQRYVDLIANPEVRETFQIRSKVIAFIRSFLD 191
Query: 130 KNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGFNKIFEIN 189
++ FMEVETP+LH PGGA A+PF THHN+L+M MF+RIAPELYLKRL +GGF K++EIN
Sbjct: 192 RHGFMEVETPMLHPIPGGATARPFATHHNALDMPMFMRIAPELYLKRLTVGGFEKVYEIN 251
Query: 190 KNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKIDYQGRLLD 249
+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++++++ D +GTT I +D
Sbjct: 252 RNFRNEGLSTRHNPEFTMLEFYWAYADYRDAMDLTEQLLRELSQDVLGTTVIPCGEDTVD 311
Query: 250 FSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNNLKKDILQLM 309
FS F +L++ EAI ++ P DL+++ S L+K+ + + L + +I
Sbjct: 312 FSADFARLSVTEAILQHNPHLRSSDLESRESAASILQKLGVEVKEGWGLGRIHMEI---- 367
Query: 310 LFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIANGFSELNDP 369
FEET E KL PT++T YPTE+SPLAR+ N +N +IT+RFE F+ G E+ANGFSELND
Sbjct: 368 -FEETAEHKLIQPTFVTEYPTEVSPLARR-NDDNPDITDRFEFFVGGRELANGFSELNDA 425
Query: 370 EEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLIMLLTNSKNI 429
E+Q+ RF+ Q+ K+ + E + ++D DY+ ALEYG+PP +G GIG+DRL+MLLTN+ +I
Sbjct: 426 EDQAERFRAQVAEKDAGDDE-AMHFDHDYVRALEYGLPPTAGEGIGIDRLVMLLTNAASI 484
Query: 430 RDVILFPHLRNE 441
RDVILFPH+R E
Sbjct: 485 RDVILFPHMRPE 496
>gi|398953426|ref|ZP_10675331.1| lysyl-tRNA synthetase (class II) [Pseudomonas sp. GM33]
gi|398153876|gb|EJM42368.1| lysyl-tRNA synthetase (class II) [Pseudomonas sp. GM33]
Length = 521
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 218/441 (49%), Positives = 314/441 (71%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + + K +D+GDII A+GTL
Sbjct: 90 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLSEETLAAVKTWDMGDIIAAEGTL 144
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L +++++++L+TKSLRPLP+K L++ E +YR RY+DLI+NE+ R+ F+ R+
Sbjct: 145 ARSGKGDLYVEMTNVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEDVRQTFRVRS 204
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ K DF+EVETP+L PGGA AKPF THHN+L+M+MFLRIAPELYLKRL+
Sbjct: 205 QVIAHIRSFLMKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMFLRIAPELYLKRLV 264
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 265 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGS 324
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DL + ++ KK K+L
Sbjct: 325 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTADDLNDIDKARAIAKKAG-----AKVL 379
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+ N +N N+T+RFELFI G E
Sbjct: 380 GFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDDNPNVTDRFELFIGGRE 438
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 439 IANAYSELNDAEDQAERFMAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 497
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 498 LVMLLTNSPSIRDVILFPHMR 518
>gi|167032114|ref|YP_001667345.1| lysyl-tRNA synthetase [Pseudomonas putida GB-1]
gi|189082963|sp|B0KRL5.1|SYK_PSEPG RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|166858602|gb|ABY97009.1| lysyl-tRNA synthetase [Pseudomonas putida GB-1]
Length = 500
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 218/441 (49%), Positives = 312/441 (70%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + + K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLPEETLAAVKTWDLGDIISAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L +++++++L+TKSLRPLP+K L++ E +YR RY+DL++NE TR F+ R+
Sbjct: 124 ARSGKGDLYVEMTNVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLMVNEETRHTFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+IS IR F+ + DF+EVETP+L PGGA AKPF THHN+L+M MFLRIAPELYLKRL+
Sbjct: 184 QVISHIRKFLIERDFLEVETPMLQTIPGGAAAKPFETHHNALDMAMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYRDNMDLTEELFRELAQLVLGS 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DLQ+ + KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTAADLQDVDRARDIAKKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
+ LQ+M+FEE E KL P +IT YP E+SPLAR+ N +N +T+RFELFI G E
Sbjct: 359 GHEGLGKLQVMIFEELVEHKLEQPHFITEYPFEVSPLARR-NDDNPAVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFLAQVAEKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 477 LVMLLTNSPSIRDVILFPHMR 497
>gi|387892415|ref|YP_006322712.1| lysyl-tRNA synthetase [Pseudomonas fluorescens A506]
gi|423690291|ref|ZP_17664811.1| lysine--tRNA ligase [Pseudomonas fluorescens SS101]
gi|387162323|gb|AFJ57522.1| lysyl-tRNA synthetase [Pseudomonas fluorescens A506]
gi|388002519|gb|EIK63848.1| lysine--tRNA ligase [Pseudomonas fluorescens SS101]
Length = 500
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 217/441 (49%), Positives = 314/441 (71%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + + K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLSEETLASVKTWDMGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L +++++++L+TKSLRPLP+K L++ E +YR RY+DLI+NE+ R+ F+ R+
Sbjct: 124 ARSGKGDLYVEMTNVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEDVRQTFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ + DF+EVETP+L PGGA AKPF THHN+L+M+MFLRIAPELYLKRL+
Sbjct: 184 QVIAHIRSFLMQRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGS 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DL + ++ KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTADDLNDIDKARAIAKKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+ N +N N+T+RFELFI G E
Sbjct: 359 GFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDDNPNVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFMAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 477 LVMLLTNSPSIRDVILFPHMR 497
>gi|408822684|ref|ZP_11207574.1| lysyl-tRNA ligase [Pseudomonas geniculata N1]
Length = 503
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 213/446 (47%), Positives = 306/446 (68%), Gaps = 21/446 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M KR+MGK SF +QD SG +IQL++ ++G + YT FK +D+GDII +G L +
Sbjct: 75 MAKRIMGKASFAQIQDESG-----RIQLFLQGTVLG-DAYTAFKGWDVGDIIAVEGGLTR 128
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+K S++L+TKSLRPLP+K+ L++ E +YR RY+DLI+ +R VF KR++I
Sbjct: 129 TKTGELSVKAESIRLLTKSLRPLPDKWHGLADVEQRYRQRYVDLIVTPESRAVFIKRSKI 188
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I ++R +++ DF+EVETP++H PGGA AKPF THHN+L++ ++LR+APELYLKRL +G
Sbjct: 189 IRAMRAWLDNRDFLEVETPMMHYIPGGAAAKPFTTHHNALDLDLYLRVAPELYLKRLTVG 248
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G +++EIN+NFRNEG+S RHNPEFTM+E Y AY Y +M TE +I+ + G T+
Sbjct: 249 GLERVYEINRNFRNEGVSTRHNPEFTMMELYEAYATYNEIMDLTEGVIRDVAKAVNGGTE 308
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELK----KINPKFNQKK 296
+++ G +D +F + + EA++ + P+ + D ++ L + ++ P + K
Sbjct: 309 VEWDGAKIDLGPAFRRWRMDEAVRHHNPEISAADCTDRDALLRHCERLKIRVKPSYGWGK 368
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
+L L +FE T E L PT+IT++P E+SPLAR +N + T+RFELF+ G
Sbjct: 369 LL---------LEIFEATVEHTLIQPTFITDHPVEVSPLAR-ANDNDPGYTDRFELFVNG 418
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELNDPE+Q+ RF+ Q+ K + E + +YD DYI ALEYGM P G GIGV
Sbjct: 419 KELANGFSELNDPEDQAQRFQAQVAAKEGGDDE-AMHYDADYIRALEYGMAPTGGLGIGV 477
Query: 417 DRLIMLLTNSKNIRDVILFPHLRNEN 442
DRL+MLLT S +IRDV+LFP++R E
Sbjct: 478 DRLVMLLTGSSSIRDVLLFPYMRPEQ 503
>gi|148981823|ref|ZP_01816540.1| lysyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
gi|145960731|gb|EDK26071.1| lysyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
Length = 505
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 219/443 (49%), Positives = 311/443 (70%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM K F+ +Q+TSG +IQ Y + ++ K L ++ DIGDIIG KG L K+
Sbjct: 73 RVMAKRGPFLAIQETSG-----RIQAYAAKDV-QKVLKEQYQGLDIGDIIGVKGALHKSG 126
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE++YR RY+DLI+NE++R F R++++S
Sbjct: 127 KGDLYVNMEEFELLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSRNAFIVRSKLVS 186
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
SIR+FM ++EVETP++H PGGA A+PFITHHN+L++ M+LR+APELYLKRL++GGF
Sbjct: 187 SIRNFMSSKGYLEVETPMMHVIPGGATARPFITHHNALDIDMYLRVAPELYLKRLVVGGF 246
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
+++FEIN+NFRNEG+SPRHNPEFTM+EFY AY++Y LM TE+M+ MD +G+T +
Sbjct: 247 DRVFEINRNFRNEGLSPRHNPEFTMMEFYQAYSDYKDLMDLTEEMLSTAAMDVLGSTSMP 306
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y ++F + ++++ EAIK Y P++ EI DLQ++ + + K ++ +
Sbjct: 307 YGDETVEFGGKYARMSMFEAIKHYNPEHAEIQALTEEDLQDREKMVAIAKSVHVEVETFW 366
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E +L PT+IT YP +ISPLAR+S+ +N T+RFE FI G
Sbjct: 367 TCGQLLEEI-----FGETAEPQLIQPTFITGYPADISPLARRSD-DNPFFTDRFEFFIGG 420
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND E+Q RFK Q++ K+ + E + YYD DYI ALE+G+PP +G GIG+
Sbjct: 421 REVANGFSELNDAEDQDERFKAQVNAKDAGDDE-AMYYDADYITALEHGLPPTAGQGIGI 479
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL ML TN+ IRDVILFP +R
Sbjct: 480 DRLAMLFTNTHTIRDVILFPAMR 502
>gi|386021473|ref|YP_005939497.1| lysyl-tRNA synthetase [Pseudomonas stutzeri DSM 4166]
gi|327481445|gb|AEA84755.1| lysyl-tRNA synthetase [Pseudomonas stutzeri DSM 4166]
Length = 500
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 216/443 (48%), Positives = 314/443 (70%), Gaps = 17/443 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I F++LQD SG +IQ+Y+ +++ K++D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGPFMVLQDMSG-----RIQVYVDRKMLPAEQVEAVKHFDLGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L + +++++L+TKSLRPLP+KF L++ E +YR RY+DL++NE R+ F+ R+
Sbjct: 124 ARSGKGDLYVYMNNVRLLTKSLRPLPDKFHGLTDTEQRYRQRYVDLMVNEEVRETFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
++I+ IR F+ + DF+EVETP+L PGGA AKPF THHN+L+M MFLRIAPELYLKRL+
Sbjct: 184 KVIAHIRKFLAERDFLEVETPMLQTIPGGAAAKPFETHHNALDMPMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF ++FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 244 VGGFERVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQAVLGS 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I K+ P+ + DL + ++ KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFARLSVFDSILKFNPEISAADLNDLEKARAIAKKAG-----AKLL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
+ LQ+M+FEE E KL PT+IT YP E+SPLAR+ N N N+T+RFELFI G E
Sbjct: 359 GHEGLGKLQVMIFEELVEHKLEQPTFITEYPFEVSPLARR-NDRNPNVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + ++D D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFHAQVADKDAGDDE-AMHFDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLRNE 441
L+MLLTNS +IRDVILFPH+R E
Sbjct: 477 LVMLLTNSPSIRDVILFPHMRPE 499
>gi|417949711|ref|ZP_12592843.1| lysyl-tRNA synthetase [Vibrio splendidus ATCC 33789]
gi|342807851|gb|EGU43029.1| lysyl-tRNA synthetase [Vibrio splendidus ATCC 33789]
Length = 505
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 219/443 (49%), Positives = 311/443 (70%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM K F+ +Q+TSG +IQ Y + ++ K L ++ DIGDIIG KG L K+
Sbjct: 73 RVMAKRGPFLAIQETSG-----RIQAYAAKDV-QKVLKEQYQGLDIGDIIGVKGALHKSG 126
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE++YR RY+DLI+NE++R F R++++S
Sbjct: 127 KGDLYVNMEEFELLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSRNAFIVRSKLVS 186
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
SIR+FM ++EVETP++H PGGA A+PFITHHN+L++ M+LR+APELYLKRL++GGF
Sbjct: 187 SIRNFMSSKGYLEVETPMMHVIPGGATARPFITHHNALDIDMYLRVAPELYLKRLVVGGF 246
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
+++FEIN+NFRNEG+SPRHNPEFTM+EFY AY++Y LM TE+M+ MD +G+T +
Sbjct: 247 DRVFEINRNFRNEGLSPRHNPEFTMMEFYQAYSDYKDLMDLTEEMLSTAAMDVLGSTSMP 306
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y ++F + ++++ EAIK Y P++ EI DLQ++ + + K ++ +
Sbjct: 307 YGDETVEFGGKYARMSMFEAIKHYNPEHAEIQALTEEDLQDREKMVAIAKSVHVEVETFW 366
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E +L PT+IT YP +ISPLAR+S+ +N T+RFE FI G
Sbjct: 367 TCGQLLEEI-----FGETAEPQLIQPTFITGYPADISPLARRSD-DNPFFTDRFEFFIGG 420
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND E+Q RFK Q++ K+ + E + YYD DYI ALE+G+PP +G GIG+
Sbjct: 421 REVANGFSELNDAEDQDERFKAQVNAKDAGDDE-AMYYDADYITALEHGLPPTAGQGIGI 479
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL ML TN+ IRDVILFP +R
Sbjct: 480 DRLAMLFTNTHTIRDVILFPAMR 502
>gi|358012864|ref|ZP_09144674.1| lysyl-tRNA synthetase [Acinetobacter sp. P8-3-8]
Length = 508
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 222/445 (49%), Positives = 314/445 (70%), Gaps = 22/445 (4%)
Query: 4 RVM-GKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM + SFI++QD +G +IQLY++ + + + K D+GDII +G L ++
Sbjct: 80 RVMLNRGSFIVIQDMTG-----RIQLYVARKELAPEVLETIKGLDLGDIIAVQGYLGRSG 134
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TKSLRPLP+KF L++ E+KYR RY+DLI+NE+TRK F+ R +++S
Sbjct: 135 KGDLYVHIEHFELLTKSLRPLPDKFHGLNDTEVKYRKRYLDLIVNEDTRKTFEIRAKVVS 194
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
IR ++ FMEVETP++H PGGA A+PF THHN+L+M +FLRIAPELYLKRL++GGF
Sbjct: 195 GIRSYLSNERFMEVETPMMHVIPGGASARPFETHHNALDMPLFLRIAPELYLKRLVVGGF 254
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
++FEIN+NFRNEG+S RHNPEFTMIEFY AY +Y LM TE M++K+ +D +G+T +
Sbjct: 255 ERVFEINRNFRNEGVSTRHNPEFTMIEFYQAYADYKDLMALTESMLEKLAIDILGSTDVP 314
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFL----KSELK-KINPKFNQKKI 297
Y + F ++K+++ +AI + P + ++ ++ FL K ELK ++ P F K
Sbjct: 315 YGEEVYSFKGPYKKISMFDAILENNPNFTPENVSDREFLAKFVKEELKEQVKPGFGLGK- 373
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
LQ ++FEET ETKL PT+IT YP E SPLAR+ N N +IT+RFE FI G
Sbjct: 374 --------LQTIVFEETVETKLRQPTFITEYPAETSPLARR-NDSNPHITDRFEFFIGGR 424
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
E+ANGFSELNDP +Q+ RF+ Q+ K+ + E + +YD D+I ALEYG+PP +G GIG+D
Sbjct: 425 ELANGFSELNDPIDQAERFQAQVKEKDAGDDE-AMHYDADFIEALEYGLPPTAGEGIGID 483
Query: 418 RLIMLLTNSKNIRDVILFPHLRNEN 442
RL+ML N+ +IRDVILFPH+R++N
Sbjct: 484 RLVMLFANAPSIRDVILFPHMRHKN 508
>gi|395500420|ref|ZP_10431999.1| lysyl-tRNA ligase [Pseudomonas sp. PAMC 25886]
Length = 499
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 218/441 (49%), Positives = 313/441 (70%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + + K +D+GDII A+GTL
Sbjct: 68 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLSEETLASVKTWDMGDIIAAEGTL 122
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L +++++++L+TKSLRPLP+K L++ E +YR RY+DLI+NE R+ F+ R+
Sbjct: 123 ARSGKGDLYVEMTNVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEEVRQTFRVRS 182
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ K DF+EVETP+L PGGA AKPF THHN+L+M+MFLRIAPELYLKRL+
Sbjct: 183 QVIAHIRSFLMKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMFLRIAPELYLKRLV 242
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 243 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGS 302
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DL + ++ KK K+L
Sbjct: 303 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTADDLNDIDKARAIAKKAG-----AKVL 357
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+ N +N N+T+RFELFI G E
Sbjct: 358 GFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDDNPNVTDRFELFIGGRE 416
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 417 IANAYSELNDAEDQAERFMAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 475
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 476 LVMLLTNSPSIRDVILFPHMR 496
>gi|338999236|ref|ZP_08637886.1| lysyl-tRNA synthetase [Halomonas sp. TD01]
gi|338763800|gb|EGP18782.1| lysyl-tRNA synthetase [Halomonas sp. TD01]
Length = 504
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 221/440 (50%), Positives = 303/440 (68%), Gaps = 15/440 (3%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM K FI++QD +G +IQLY+ + + ++ D K +DIGDI+ A+G + K+
Sbjct: 75 RVMRKRGPFIVIQDVAG-----QIQLYVDKKGLPADVLEDIKGWDIGDIVAARGPVHKSG 129
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TKSLRPLP+KF L++QE +YR RY+DLI+N +RKVF+ R +IS
Sbjct: 130 KGDLYVMMVEAQLLTKSLRPLPDKFHGLTDQEARYRQRYVDLIMNPQSRKVFETRAAVIS 189
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
S+R F E FMEVETP+L PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++GGF
Sbjct: 190 SMRRFFEARGFMEVETPMLQPIPGGAAARPFITHHNALDIDMYLRIAPELYLKRLVVGGF 249
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y L+ TE M++ + +GTT I
Sbjct: 250 EKVFEINRNFRNEGLSTRHNPEFTMVEFYWAYADYRDLLDMTEAMLRTAAQEVLGTTTIV 309
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNNLK 302
YQG DF + F +LT+ +AI + + DL ++ +K+ K L ++
Sbjct: 310 YQGASYDFGQPFHRLTLRQAILDHGDGITDADLDTLEAAQAVAEKLGIKVKPSWGLGKVQ 369
Query: 303 KDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIANG 362
+I FEE E KL PT+IT YP E+SPLAR+ N N +T+RFE F+ G EIANG
Sbjct: 370 TEI-----FEEVAEHKLDQPTFITEYPAEVSPLARR-NDANPFVTDRFEFFVGGREIANG 423
Query: 363 FSELNDPEEQSVRFKNQIDLKNEINGELSS-YYDTDYIHALEYGMPPASGCGIGVDRLIM 421
FSELND E+Q+ RF+ Q K+ G+L + Y+D DY+ ALEYG+PP +G GIG+DRL+M
Sbjct: 424 FSELNDAEDQAERFREQAAEKD--AGDLEAMYFDADYVRALEYGLPPTAGEGIGIDRLVM 481
Query: 422 LLTNSKNIRDVILFPHLRNE 441
L T+S +IRDV+LFP +R E
Sbjct: 482 LFTDSPSIRDVLLFPAMRPE 501
>gi|399008377|ref|ZP_10710852.1| lysyl-tRNA synthetase (class II) [Pseudomonas sp. GM17]
gi|425897764|ref|ZP_18874355.1| lysine--tRNA ligase [Pseudomonas chlororaphis subsp. aureofaciens
30-84]
gi|397891409|gb|EJL07887.1| lysine--tRNA ligase [Pseudomonas chlororaphis subsp. aureofaciens
30-84]
gi|398116859|gb|EJM06616.1| lysyl-tRNA synthetase (class II) [Pseudomonas sp. GM17]
Length = 499
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 219/441 (49%), Positives = 313/441 (70%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + + K +D+GDII A+GTL
Sbjct: 68 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLPEETLDAVKTWDLGDIIAAEGTL 122
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L ++++ ++L+TKSLRPLP+K L++ E +YR RY+DLI+NE+ R+ F+ R+
Sbjct: 123 ARSGKGDLYVEMTQVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEDVRETFRVRS 182
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ K DF+EVETP+L PGGA AKPF THHN+L+M+MFLRIAPELYLKRL+
Sbjct: 183 QVIAHIRSFLMKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMFLRIAPELYLKRLV 242
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 243 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGS 302
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DL + ++ KK K+L
Sbjct: 303 TDVPYGDKVFHFGEPFARLSVFDSILKYNPELTFEDLNDIDKARAIAKKAG-----AKVL 357
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+ N EN N+T+RFELFI G E
Sbjct: 358 GFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDENPNVTDRFELFIGGRE 416
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 417 IANAYSELNDAEDQAERFMAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 475
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 476 LVMLLTNSPSIRDVILFPHMR 496
>gi|398872995|ref|ZP_10628265.1| lysyl-tRNA synthetase (class II) [Pseudomonas sp. GM74]
gi|398200866|gb|EJM87763.1| lysyl-tRNA synthetase (class II) [Pseudomonas sp. GM74]
Length = 500
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 218/441 (49%), Positives = 313/441 (70%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + + K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLSEETLAAVKTWDMGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L +++++++L+TKSLRPLP+K L++ E +YR RY+DLI+NE+ R+ F+ R+
Sbjct: 124 ARSGKGDLYVEMTNVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEDVRQTFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ K DF+EVETP+L PGGA AKPF THHN+L+M MFLRIAPELYLKRL+
Sbjct: 184 QVIAHIRSFLMKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMGMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGS 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DL + ++ KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTADDLNDIDKARAIAKKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+ N +N N+T+RFELFI G E
Sbjct: 359 GFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDDNPNVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFMAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 477 LVMLLTNSPSIRDVILFPHMR 497
>gi|424675358|ref|ZP_18112265.1| lysyl-tRNA ligase [Francisella tularensis subsp. tularensis
70001275]
gi|417434113|gb|EKT89085.1| lysyl-tRNA ligase [Francisella tularensis subsp. tularensis
70001275]
Length = 576
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 220/442 (49%), Positives = 313/442 (70%), Gaps = 13/442 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNY-DIGDIIGAKGTLF 59
+L+RVMGK SFI LQD +G +IQ+Y+ + Y FKN D+GDI+G GT+F
Sbjct: 147 VLRRVMGKASFITLQDYTG-----RIQVYLKKSDLPDGQYETFKNLCDLGDIVGITGTMF 201
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KTN GELS++ + +++TK++RPLP+KF L++QE++YR RY+DLI NE R+VFK R++
Sbjct: 202 KTNIGELSVEANHFEILTKAIRPLPDKFHGLADQEMRYRQRYVDLITNEKAREVFKVRSK 261
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR++ ++ DFMEVETP++H GGA AKPF THHN+L+M ++LRIAPELYLKRL++
Sbjct: 262 VVNFIRNYFDRLDFMEVETPMMHVLQGGAAAKPFKTHHNALDMPLYLRIAPELYLKRLVV 321
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF +++EIN+NFRNEG+S RHNPEFTM+EFY AY +Y LM TE M+ K++ + IG+
Sbjct: 322 GGFERVYEINRNFRNEGVSSRHNPEFTMLEFYMAYADYNDLMDLTEDMLSKLVQEVIGSE 381
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
++Y ++F +E+++++++I KY + DL K +K+ K L
Sbjct: 382 ILEYGEYKINFGGKYERISMVDSIVKYNDDITKEDLVTFESAKKIAEKLKIKVEAYHELG 441
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+L +I FEET E +L PT+IT+YP +SPLAR+ + N T+RFE FI E+
Sbjct: 442 HLINEI-----FEETVEHQLIQPTFITDYPAVVSPLARRQD-GNPEFTDRFEFFIGAREV 495
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
ANGFSELND E+Q+ RF+ Q++ + E + YD DYI ALEYGMPP +G GIG+DRL
Sbjct: 496 ANGFSELNDAEDQAERFRKQVEAAASGDDE-AMPYDKDYIRALEYGMPPTAGQGIGIDRL 554
Query: 420 IMLLTNSKNIRDVILFPHLRNE 441
+M LTNS++IRDVILFPH++ E
Sbjct: 555 VMYLTNSQSIRDVILFPHMKPE 576
>gi|170723282|ref|YP_001750970.1| lysyl-tRNA synthetase [Pseudomonas putida W619]
gi|229559861|sp|B1JD39.1|SYK_PSEPW RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|169761285|gb|ACA74601.1| lysyl-tRNA synthetase [Pseudomonas putida W619]
Length = 500
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 218/441 (49%), Positives = 311/441 (70%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + + K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLPEETLAAVKTWDLGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L +++++++L+TKSLRPLP+K L++ E +YR RY+DL++NE TR F+ R+
Sbjct: 124 ARSGKGDLYVEMTNVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLMVNEETRHTFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+IS IR F+ DF+EVETP+L PGGA AKPF THHN+L+M MFLRIAPELYLKRL+
Sbjct: 184 QVISHIRKFLIDRDFLEVETPMLQTIPGGAAAKPFETHHNALDMAMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYRDNMDLTEELFRELAQLVLGS 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DLQ+ + KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTAADLQDVDRARDIAKKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
+ LQ+M+FEE E KL P +IT YP E+SPLAR+ N +N +T+RFELFI G E
Sbjct: 359 GHEGLGKLQVMIFEELVEHKLEQPHFITEYPFEVSPLARR-NDDNPAVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFLAQVAEKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 477 LVMLLTNSPSIRDVILFPHMR 497
>gi|50084268|ref|YP_045778.1| lysyl-tRNA synthetase [Acinetobacter sp. ADP1]
gi|2501016|sp|Q43990.1|SYK_ACIAD RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|1359473|emb|CAA86924.1| lysyl-tRNA-synthase [Acinetobacter sp. ADP1]
gi|49530244|emb|CAG67956.1| lysyl-tRNA synthetase [Acinetobacter sp. ADP1]
Length = 509
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 216/448 (48%), Positives = 315/448 (70%), Gaps = 24/448 (5%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G++ SF+++QD +G +IQLY+ + + + K+ D+GDII A+G +
Sbjct: 76 KVAGRVMLNRGSFMVIQDMTG-----RIQLYVDRKGLPADTLETIKSLDLGDIIAAEGYI 130
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L + + +L+TKSLRPLP+KF L++ E KYR RY+DLI+NE TRK F+ R
Sbjct: 131 GRSGKGDLYVHLEGFELLTKSLRPLPDKFHGLTDTEAKYRKRYLDLIVNEETRKTFEIRA 190
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+++ IR F+ FMEVETP++H PGGA A+PF+THHN+L+M+++LRIAPELYLKRL+
Sbjct: 191 QVVAGIRAFLTNQRFMEVETPMMHVIPGGASAQPFVTHHNALDMELYLRIAPELYLKRLV 250
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF ++FEIN+NFRNEG+S RHNPEFTMIEFY AY +Y LM+ TE M++K+ +D +GT
Sbjct: 251 VGGFERVFEINRNFRNEGVSTRHNPEFTMIEFYQAYADYKDLMQLTENMLEKLALDILGT 310
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y + F F+K+++ +AI ++ P + ++ ++ FL KF Q +
Sbjct: 311 TDVPYGDEVYSFKGPFKKISMFDAILEHNPDFTPENVNDREFLA--------KFTQDVLK 362
Query: 299 NNLKKDI----LQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFI 354
+K LQ ++FEET ETKL PT+IT YP E SPLAR+ N +N +IT+RFE FI
Sbjct: 363 EQVKPGFGLGKLQTIVFEETVETKLRQPTFITEYPAETSPLARR-NDDNPHITDRFEFFI 421
Query: 355 IGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGI 414
G E+ANGFSELNDP +Q+ RF+ Q+ K+ + E + +YD D+I ALEYG+PP +G GI
Sbjct: 422 GGRELANGFSELNDPIDQAERFQAQVAEKDAGDDE-AMHYDADFIEALEYGLPPTAGQGI 480
Query: 415 GVDRLIMLLTNSKNIRDVILFPHLRNEN 442
G+DRL+M+ N+ +IRDV+LFPH+R ++
Sbjct: 481 GIDRLVMIFANAPSIRDVLLFPHMRRKD 508
>gi|372268590|ref|ZP_09504638.1| lysyl-tRNA synthetase [Alteromonas sp. S89]
Length = 495
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 223/448 (49%), Positives = 315/448 (70%), Gaps = 30/448 (6%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
R++ K F+++QD S +IQLY +++ K++ + +DIGDI+G KGTL K+
Sbjct: 68 RILAKRGPFMVIQDVSD-----RIQLY-ADKTAQKDIKERWGTWDIGDIVGVKGTLHKSG 121
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + L+TK+LRPLP KF +++QE++YR RY+DLI +R VF+ R+++IS
Sbjct: 122 KGDLYVNCEDYSLLTKALRPLPEKFHGIADQEMRYRQRYVDLIATPESRDVFRIRSEVIS 181
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
IR F+ N FMEVETP+L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++GGF
Sbjct: 182 YIRSFLNNNQFMEVETPMLQVIPGGATARPFVTHHNALDIDMYLRIAPELYLKRLVVGGF 241
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
+++EIN+NFRNEG+S RHNPEFTM+EFY AY +Y LM TE MI+ I D +G+T ++
Sbjct: 242 ERVYEINRNFRNEGLSTRHNPEFTMLEFYQAYADYNDLMDLTEAMIRGICTDVLGSTTVN 301
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNNLK 302
YQG DF+K F+++++ ++I KY P+ D+ N I+ + KK+ L+
Sbjct: 302 YQGSSYDFAKPFDRISVFDSILKYNPELKASDIDN----------ID---SAKKVAEGLE 348
Query: 303 ---KDI-----LQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFI 354
KDI +Q+ +FE+T E +L PT+IT YPTE+SPLAR+ N EN +T+RFE F+
Sbjct: 349 IPLKDIWGLGKIQIEIFEKTVEHRLDQPTFITEYPTEVSPLARR-NDENPFVTDRFEFFV 407
Query: 355 IGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGI 414
G EIANGFSELND E+Q+ RFK Q+ K E + + ++D DYI ALEYG+PP +G GI
Sbjct: 408 GGREIANGFSELNDAEDQAERFKAQVAEK-EAGDDEAMHFDADYIRALEYGLPPTAGEGI 466
Query: 415 GVDRLIMLLTNSKNIRDVILFPHLRNEN 442
G+DRL+MLLT+S +IRDV+LFPH+R E
Sbjct: 467 GIDRLVMLLTDSPSIRDVLLFPHMRPEG 494
>gi|387772399|ref|ZP_10128346.1| lysine--tRNA ligase [Haemophilus parahaemolyticus HK385]
gi|386906492|gb|EIJ71220.1| lysine--tRNA ligase [Haemophilus parahaemolyticus HK385]
Length = 500
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 228/447 (51%), Positives = 313/447 (70%), Gaps = 25/447 (5%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNY-DIGDIIGAKGTLF 59
ML+RVMGK +FI +QD SG +IQLY++ + + + Y + + D+GDIIG KGTLF
Sbjct: 71 MLRRVMGKATFITIQDVSG-----QIQLYVARDNLPEGEYQNTVSLLDLGDIIGVKGTLF 125
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGEL+++ S L+L+TKSLRPLPNK + L++QEI+YR RY+DLI NE +R+ F R++
Sbjct: 126 KTKTGELTVRASELQLLTKSLRPLPNKHKGLTDQEIRYRQRYLDLIANEESRRAFVIRSK 185
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
++S IR F DF+EVETP+L PGGA AKPFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 186 VVSGIRQFFLDKDFIEVETPMLQVIPGGAAAKPFITHHNALDVDMYLRIAPELYLKRLVV 245
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTMIE+Y AY +Y LM TE++++K+ +D +GTT
Sbjct: 246 GGFERVFELNRNFRNEGVSVRHNPEFTMIEYYQAYADYHDLMDNTEELLRKLAIDILGTT 305
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKS-ELKK-----INPKFN 293
+ Y DF K FE++T+ +AI KY DL N F KS E+ K I +
Sbjct: 306 TVPYGEYTFDFGKPFERITMHDAIVKYGNGIKREDLDN--FEKSVEIAKGLGIEIQKSWG 363
Query: 294 QKKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELF 353
++N +FEE E +L PT++ +P EISPLAR+ N EN +T+RFELF
Sbjct: 364 LGSVVN---------AIFEEVAEHQLIQPTFLMAHPAEISPLARR-NDENPEVTDRFELF 413
Query: 354 IIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCG 413
I G EI NGFSELND E+Q+ RF Q+ K E + + ++D D++ ALE+G+PP +G G
Sbjct: 414 IGGREIGNGFSELNDAEDQAERFHAQVAAK-EAGDDEAMFFDDDFVVALEHGLPPTAGEG 472
Query: 414 IGVDRLIMLLTNSKNIRDVILFPHLRN 440
+G+DRL M+ N+ +IRDVILFP +R
Sbjct: 473 LGIDRLAMIFANAPSIRDVILFPAMRQ 499
>gi|431926695|ref|YP_007239729.1| lysyl-tRNA synthetase [Pseudomonas stutzeri RCH2]
gi|431824982|gb|AGA86099.1| lysyl-tRNA synthetase (class II) [Pseudomonas stutzeri RCH2]
Length = 500
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 218/443 (49%), Positives = 311/443 (70%), Gaps = 17/443 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I F++LQD SG +IQ+Y+ + + K++D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGPFMVLQDMSG-----RIQVYVDRKTLPAEQVEAVKHFDLGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L + ++S++L+TKSLRPLP+KF L++ E +YR RY+DL++NE R+ F+ R+
Sbjct: 124 ARSGKGDLYVYMNSVRLLTKSLRPLPDKFHGLTDTEQRYRQRYVDLMVNEEVRETFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+IS IR F+ + F+EVETP+L PGGA AKPF THHN+L+M MFLRIAPELYLKRL+
Sbjct: 184 QVISHIRKFLAERHFLEVETPMLQTIPGGAAAKPFETHHNALDMPMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF ++FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 244 VGGFERVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQAVLGS 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ + DL + ++ KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFARLSVFDSILKYNPEISADDLNDVEKARAIAKKAG-----AKLL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
+ LQ+M+FEE E KL P +IT YP E+SPLAR+ N N N+T+RFELFI G E
Sbjct: 359 GHEGLGKLQVMIFEELVEHKLEQPHFITEYPFEVSPLARR-NDRNPNVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + ++D D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFHAQVADKDAGDDE-AMHFDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLRNE 441
L+MLLTNS +IRDVILFPH+R E
Sbjct: 477 LVMLLTNSPSIRDVILFPHMRPE 499
>gi|26988228|ref|NP_743653.1| lysyl-tRNA synthetase [Pseudomonas putida KT2440]
gi|386013573|ref|YP_005931850.1| LysS protein [Pseudomonas putida BIRD-1]
gi|38258322|sp|Q88MS3.1|SYK_PSEPK RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|24982968|gb|AAN67117.1|AE016340_8 lysyl-tRNA synthetase [Pseudomonas putida KT2440]
gi|313500279|gb|ADR61645.1| LysS [Pseudomonas putida BIRD-1]
Length = 500
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 217/441 (49%), Positives = 312/441 (70%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + + K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLPEETLAAVKTWDLGDIISAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L +++++++L+TKSLRPLP+K L++ E +YR RY+DL++NE TR F+ R+
Sbjct: 124 ARSGKGDLYVEMTNVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLMVNEETRHTFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+IS IR F+ + DF+EVETP+L PGGA AKPF THHN+L+M MFLRIAPELYLKRL+
Sbjct: 184 QVISHIRKFLIERDFLEVETPMLQTIPGGAAAKPFETHHNALDMAMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYRDNMDLTEELFRELAQLVLGS 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DLQ+ + +K K+L
Sbjct: 304 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTAADLQDVDRAREIARKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
+ LQ+M+FEE E KL P +IT YP E+SPLAR+ N +N +T+RFELFI G E
Sbjct: 359 GHEGLGKLQVMIFEELVEHKLEQPHFITEYPFEVSPLARR-NDDNPAVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFLAQVAEKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 477 LVMLLTNSPSIRDVILFPHMR 497
>gi|312884020|ref|ZP_07743737.1| lysyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
gi|309368478|gb|EFP96013.1| lysyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
Length = 505
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 215/446 (48%), Positives = 315/446 (70%), Gaps = 20/446 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
R+M K F+ +Q+TSG +IQ Y + ++ K L ++ DIGDIIG KG L K+
Sbjct: 73 RIMAKRGPFLAIQETSG-----RIQAYAAKDV-QKELKEKYQGLDIGDIIGVKGALHKSG 126
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + S +L+TK+LRPLP KF L++QE++YR RY+DLI+N+++R+ F R+++++
Sbjct: 127 KGDLYVNMESYELLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNQDSREAFIVRSKLVA 186
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM ++EVETP++H PGGA A+PFITHHN+L++ M+LR+APELYLKRL++GGF
Sbjct: 187 AIRNFMSSKGYLEVETPMMHVIPGGATARPFITHHNALDIDMYLRVAPELYLKRLVVGGF 246
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
+++FEIN+NFRNEG+SPRHNPEFTM+EFY AY++Y LM TE+M+ + ++ +G+T +
Sbjct: 247 DRVFEINRNFRNEGLSPRHNPEFTMMEFYQAYSDYKDLMDLTEEMLSSVALEVLGSTSMP 306
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y ++F + ++++ EAIK Y P++ EI DLQ++ + S K ++ +
Sbjct: 307 YGDETVEFGGKYARMSMFEAIKHYNPEHREIQALTESDLQDREKMVSIAKSVHVEVESFW 366
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E +L PT+IT YP +ISPLAR+S+ +N T+RFE FI G
Sbjct: 367 TCGQLLEEI-----FGETAEPQLIQPTFITGYPADISPLARRSD-DNPFFTDRFEFFIGG 420
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND E+Q RFK Q+ K+ + E + YYD DYI ALE+G+PP +G GIG+
Sbjct: 421 REVANGFSELNDAEDQDARFKAQVQAKDAGDDE-AMYYDADYITALEHGLPPTAGQGIGI 479
Query: 417 DRLIMLLTNSKNIRDVILFPHLRNEN 442
DRL ML TN+ IRDVILFP +R ++
Sbjct: 480 DRLAMLFTNTHTIRDVILFPAMRPQS 505
>gi|222055188|ref|YP_002537550.1| lysyl-tRNA synthetase [Geobacter daltonii FRC-32]
gi|221564477|gb|ACM20449.1| lysyl-tRNA synthetase [Geobacter daltonii FRC-32]
Length = 494
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 223/445 (50%), Positives = 308/445 (69%), Gaps = 21/445 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
+ +R GK +F+ LQD G+ QLY+ + +G+ ++ F+++DIGDI+GA G F+
Sbjct: 65 IARRSFGKAAFVQLQD-----RKGRFQLYVKKDAVGEEVFEQFESFDIGDIVGATGYPFR 119
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+ V ++L+TKSL PLP KF L++ E +YR RY+DLI+N R++F KR+++
Sbjct: 120 TKTGELSLHVEQIRLLTKSLLPLPEKFHGLTDVETRYRQRYVDLIVNPEVRELFVKRSRV 179
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+ IR FM KNDF+EVETP++ PGGA A+PF+THHN+L+M++FLRIAPELYLKRL++G
Sbjct: 180 INLIREFMVKNDFLEVETPMMQQIPGGATARPFVTHHNALDMELFLRIAPELYLKRLVVG 239
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G +++FEIN+NFRNEGIS RHNPEFTM+EFY AY + LM +TE+++ + + +GT
Sbjct: 240 GLDRVFEINRNFRNEGISVRHNPEFTMMEFYQAYATFEDLMNYTEELLCHVAQNVLGTLD 299
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
YQG + F + +++ T+ EAI +Y +ID KS + KKI +
Sbjct: 300 FSYQGMPISFQRPWKRFTVKEAIL----EYGDID------AKSLEDRDMAYAYAKKIGLD 349
Query: 301 LKKDI----LQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L +DI L +FEE ETKL PT+IT YPTE+SPL+RKS+ + I +RFE F G
Sbjct: 350 LPEDIGYGKLITEIFEEVAETKLIQPTFITAYPTEVSPLSRKSD-HDPEIVDRFEFFCAG 408
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+AN FSELNDP +Q RF Q+ K + + E + Y D DYI ALEYGMPP +G GIG+
Sbjct: 409 REMANAFSELNDPVDQKERFLAQVAAKAKGDEE-AHYMDEDYIRALEYGMPPTAGEGIGI 467
Query: 417 DRLIMLLTNSKNIRDVILFPHLRNE 441
DRL+MLL ++ +IRDVILFP LR E
Sbjct: 468 DRLVMLLCDAPSIRDVILFPQLRKE 492
>gi|127511746|ref|YP_001092943.1| lysyl-tRNA synthetase [Shewanella loihica PV-4]
gi|166229827|sp|A3QB36.1|SYK_SHELP RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|126637041|gb|ABO22684.1| lysyl-tRNA synthetase [Shewanella loihica PV-4]
Length = 500
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 221/443 (49%), Positives = 310/443 (69%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
R+M K F+++QD SG +IQ Y ++ K+L ++ DIGDIIG G L +
Sbjct: 68 RIMAKRGPFLVIQDVSG-----RIQAYAGKDV-QKDLKAKYQGLDIGDIIGVTGQLHLSG 121
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE +YR RY+DLI+NE +R F R+++++
Sbjct: 122 KGDLYVNMEEYQLLTKALRPLPEKFHGLTDQETRYRQRYVDLIVNEESRAAFIMRSKVVT 181
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM +FMEVETP++H+ PGGA A+PFITHHN+L+++M+LRIAPELYLKRL++GGF
Sbjct: 182 AIRNFMVSKEFMEVETPMMHSIPGGASARPFITHHNALDIEMYLRIAPELYLKRLVVGGF 241
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
++FEIN+NFRNEG+SPRHNPEFTM+EFY AY +Y LM TE+M+ I D +G TK+
Sbjct: 242 ERVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEEMLSSIAKDLLGDTKLP 301
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y +DF +E+L++++AIKKY P I ++++ F+++ K + +
Sbjct: 302 YGEHTIDFGGPYERLSMLDAIKKYNPDNETIQSMTYEEVKDVEFMRNLAKSLGMTIEKFW 361
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E KL PT+IT YP +ISPLAR+ N EN+ IT+RFE FI G
Sbjct: 362 TCGQLLEEI-----FGETAEPKLMQPTFITGYPADISPLARR-NDENHFITDRFEFFIGG 415
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND E+Q RFK Q+D K+ + E + +YD DYI ALE+G+PP +G GIG+
Sbjct: 416 REVANGFSELNDAEDQDKRFKAQVDAKDAGDDE-AMFYDADYITALEHGLPPTAGQGIGI 474
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL+ML TN+ IRDVILFP +R
Sbjct: 475 DRLVMLFTNTHTIRDVILFPAMR 497
>gi|398846034|ref|ZP_10603037.1| lysyl-tRNA synthetase (class II) [Pseudomonas sp. GM84]
gi|398252960|gb|EJN38114.1| lysyl-tRNA synthetase (class II) [Pseudomonas sp. GM84]
Length = 500
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 218/441 (49%), Positives = 312/441 (70%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + + K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLPEETLAAVKTWDLGDIISAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L +++++++L+TKSLRPLP+K L++ E +YR RY+DL++NE TR F+ R+
Sbjct: 124 ARSGKGDLYVEMTNVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLMVNEETRNTFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+IS IR F+ + DF+EVETP+L PGGA AKPF THHN+L+M MFLRIAPELYLKRL+
Sbjct: 184 QVISHIRKFLIERDFLEVETPMLQTIPGGAAAKPFETHHNALDMAMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYRDNMDLTEELFRELAQLVLGS 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DLQ+ + KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTAADLQDVDRAREIAKKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
+ LQ+M+FEE E KL P +IT YP E+SPLAR+ N +N +T+RFELFI G E
Sbjct: 359 GHEGLGKLQVMIFEELVEHKLEQPHFITEYPFEVSPLARR-NDDNPAVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFLAQVAEKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 477 LVMLLTNSPSIRDVILFPHMR 497
>gi|425744719|ref|ZP_18862774.1| lysine--tRNA ligase [Acinetobacter baumannii WC-323]
gi|425490315|gb|EKU56615.1| lysine--tRNA ligase [Acinetobacter baumannii WC-323]
Length = 508
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 217/448 (48%), Positives = 316/448 (70%), Gaps = 24/448 (5%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G++ SFI++QD +G +IQLY+ + + ++ K+ D+GDII A+G +
Sbjct: 76 KVAGRVMLNRGSFIVIQDMTG-----RIQLYVDRKGLPTDVLETIKSLDLGDIIAAEGYI 130
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L + + +L+TKSLRPLP+KF L++ E KYR RY+DLI+NE TRK F+ R
Sbjct: 131 GRSGKGDLYVHLEGFELLTKSLRPLPDKFHGLTDTEAKYRKRYLDLIVNEETRKTFEIRA 190
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
++++ IR F+ FMEVETP++H PGGA AKPF+THHN+L+M+++LRIAPELYLKRL+
Sbjct: 191 KVVAGIRAFLTNERFMEVETPMMHVIPGGASAKPFVTHHNALDMELYLRIAPELYLKRLV 250
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF ++FEIN+NFRNEG+S RHNPEFTMIEFY AY +Y LM TE M++K+ +D +G+
Sbjct: 251 VGGFERVFEINRNFRNEGVSTRHNPEFTMIEFYQAYADYKDLMVLTENMLEKLAVDILGS 310
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y + F F+K+++ +AI ++ P + ++ ++ FL KF Q+ +
Sbjct: 311 TDVPYGDEVYSFKGPFKKISMFDAILEHNPDFTPENVNDREFLA--------KFTQEVLK 362
Query: 299 NNLKKDI----LQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFI 354
+K LQ ++FEET ETKL PT+IT YP E SPLAR+ N +N +IT+RFE FI
Sbjct: 363 EQVKPGFGLGKLQTIVFEETVETKLRQPTFITEYPAETSPLARR-NDDNPHITDRFEFFI 421
Query: 355 IGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGI 414
G E+ANGFSELNDP +Q+ RF+ Q+ K+ + E + +YD D+I ALEYG+PP +G GI
Sbjct: 422 GGRELANGFSELNDPIDQAERFQAQVAEKDAGDDE-AMHYDADFIEALEYGLPPTAGQGI 480
Query: 415 GVDRLIMLLTNSKNIRDVILFPHLRNEN 442
G+DRL+ML N+ +IRDV+LFPH+R ++
Sbjct: 481 GIDRLVMLFANAPSIRDVLLFPHMRRKD 508
>gi|339478035|ref|YP_004706855.1| lysyl-tRNA synthetase [Candidatus Moranella endobia PCIT]
gi|338172586|gb|AEI74987.1| lysyl-tRNA synthetase [Candidatus Moranella endobia PCIT]
Length = 526
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 225/440 (51%), Positives = 300/440 (68%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLY-TDFKNYDIGDIIGAKGTLF 59
M R+MGK SF LQD G IQLY+ + + Y FK D+GDI+GA G LF
Sbjct: 96 MTCRIMGKASFATLQDVGG-----TIQLYVVRDDLPNGQYNAQFKQLDLGDIVGACGKLF 150
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGELS+ + + L+TK++RPLP+KF L++QE +YR RY+DLI NE +R++FK R++
Sbjct: 151 KTRTGELSVHCNDINLLTKAIRPLPDKFHGLADQETRYRQRYLDLIANEESRQIFKIRSR 210
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I++ IR FM N FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 211 IMAEIRRFMMDNYFMEVETPMMQTIPGGAAARPFITHHNALDIDMYLRIAPELYLKRLVV 270
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEG+SPRHNPEFTM+E Y AY +Y LM E++ + + G++
Sbjct: 271 GGFERVFEINRNFRNEGLSPRHNPEFTMMELYMAYADYRDLMVLVEELFRTLTNRVFGSS 330
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y + DF K F ++T+ EAI + P+ L+N + + K + L
Sbjct: 331 VVHYGNQTFDFGKPFIQMTMTEAICHFYPETMPKALENIATATAIAASLGIKVDNSWGLG 390
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
++ +I F+ET E+ L PT+IT YP E+SPLAR SN +N +RFELFI G EI
Sbjct: 391 RVQTEI-----FQETAESNLIQPTFITAYPLEVSPLAR-SNDDNPFFADRFELFIGGREI 444
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND EEQ+ RF Q KN + E + +YD DY++ALEYG+PP +G GIGVDRL
Sbjct: 445 GNGFSELNDAEEQAARFVAQAQAKNYGDDE-AMFYDDDYVNALEYGLPPTAGLGIGVDRL 503
Query: 420 IMLLTNSKNIRDVILFPHLR 439
+M+LTNS IRDVILFP LR
Sbjct: 504 MMILTNSHTIRDVILFPVLR 523
>gi|226945981|ref|YP_002801054.1| lysyl-tRNA synthetase [Azotobacter vinelandii DJ]
gi|226720908|gb|ACO80079.1| lysyl-tRNA synthetase [Azotobacter vinelandii DJ]
Length = 500
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 215/443 (48%), Positives = 315/443 (71%), Gaps = 17/443 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I +F+++QD +G +IQ+Y+ + + K++D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGAFMVIQDMTG-----RIQVYVDRKGLPAETLEAVKHWDLGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L + +S+++L+TKSLRPLP+K L++ E +YR RY+DL++NE TR F+ R+
Sbjct: 124 ARSGKGDLYVHMSTVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLMVNEETRHTFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
QII+ IR F+ + DF+EVETP+L PGGA AKPF THHN+L++ MFLRIAPELYLKRL+
Sbjct: 184 QIIAHIRRFLAERDFLEVETPMLQVIPGGAAAKPFQTHHNALDLPMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF ++FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +GT
Sbjct: 244 VGGFERVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEQLFRELAQLVLGT 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + YQG++ F + F +L++ ++I Y P+ + DL++ ++ +K K
Sbjct: 304 TDVPYQGKVFHFGEPFARLSVFDSILYYNPEVSAADLRDIEKCRAIARKAGADV---KGF 360
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
L K LQ M+FEE E +L PT+IT YP E+SPLAR+S+ ++ ++T+RFELFI G E
Sbjct: 361 EGLGK--LQTMIFEELVEHRLEQPTFITRYPFEVSPLARRSD-DDPSVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + ++D D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFMQQVRDKDAGDDE-AMHFDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLRNE 441
L+MLLT+S +IRDVILFPH+R E
Sbjct: 477 LVMLLTDSPSIRDVILFPHMRPE 499
>gi|452877891|ref|ZP_21955139.1| lysyl-tRNA ligase [Pseudomonas aeruginosa VRFPA01]
gi|452185409|gb|EME12427.1| lysyl-tRNA ligase [Pseudomonas aeruginosa VRFPA01]
Length = 501
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 217/441 (49%), Positives = 313/441 (70%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SFI+LQD+S ++Q+Y++ + + + + K +D+GDIIGA+G L
Sbjct: 70 KVAGRIMLNRGSFIVLQDSSE-----RLQVYVNRKTLPEETLAEIKTWDLGDIIGAEGVL 124
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L + ++S++L+TKSLRPLP+K L++ E +YR RY+DL++NE TR F+ R+
Sbjct: 125 ARSGKGDLYVDMTSVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLMVNEETRHTFRVRS 184
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ + F+EVETP+L PGGA AKPF THHN+L+M MFLRIAPELYLKRL+
Sbjct: 185 QVIAHIRRFLSERGFLEVETPMLQTIPGGAAAKPFETHHNALDMAMFLRIAPELYLKRLV 244
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 245 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQAVLGS 304
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DL + ++ +K K+L
Sbjct: 305 TDVPYGDKVFHFGEPFVRLSVYDSILKYNPEITPADLNDVEKARAIARKAG-----AKVL 359
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
+ LQ+M+FEE E KL P +IT YP E+SPLAR+ N E+ ++T+RFELFI G E
Sbjct: 360 GHEGLGKLQVMIFEELVEHKLEQPHFITRYPFEVSPLARR-NDEDPSVTDRFELFIGGRE 418
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + +YD D+I+ALEYGMPP +G GIG+DR
Sbjct: 419 IANAYSELNDAEDQAERFMLQVKEKDAGDDE-AMHYDADFINALEYGMPPTAGEGIGIDR 477
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 478 LVMLLTNSPSIRDVILFPHMR 498
>gi|113461151|ref|YP_719219.1| lysyl-tRNA synthetase [Haemophilus somnus 129PT]
gi|112823194|gb|ABI25283.1| lysyl-tRNA synthetase [Haemophilus somnus 129PT]
Length = 496
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 226/442 (51%), Positives = 311/442 (70%), Gaps = 18/442 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M KR MGKI+FI L+D + IQLYIS +I+ + FK +DIGDI+G +G +FK
Sbjct: 67 MTKRFMGKIAFITLKD-----GDSSIQLYISQDIVSNAEFEKFKKWDIGDIVGVEGAVFK 121
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TNT ELSI +L+TK+LRPLP+KF LS+QE++YR RY+DLI+NE + FK R++I
Sbjct: 122 TNTDELSINTKKARLLTKALRPLPDKFHGLSDQEMRYRQRYVDLIVNEKSYNTFKLRSKI 181
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
++ IR++M N FMEVETP++ PGGA A+PFITHHN+LN ++LRI+PEL+LKRLI+G
Sbjct: 182 LAEIRNYMVSNGFMEVETPMMQVIPGGASARPFITHHNALNSDLYLRISPELFLKRLIVG 241
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF+++FEIN+NFRNEGISPRHNPEFTM+E Y A+ +Y L+K TE + + + ++ +G+
Sbjct: 242 GFDRVFEINRNFRNEGISPRHNPEFTMMELYMAHADYRDLIKLTENLFRTVAINTLGSPI 301
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELK---KINPKFNQKKI 297
+ Y DFSK F ++T+ EAI Y N+I L + + +S +K K+ + +
Sbjct: 302 VKYGNIEFDFSKPFVQMTMREAIIHYG---NDIQLDDIMSYESAVKIAQKLGIQVEKSWG 358
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L L+ +I FEE E L PT+IT YP EISPLAR+++I + T+RFE FI
Sbjct: 359 LGRLQSEI-----FEEVAEKHLIQPTFITEYPAEISPLARRNDI-DPEYTDRFEFFIGAR 412
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND E+Q+ RF++Q+ K E + + +YD DY+ ALEYGMPP +G GIG+D
Sbjct: 413 EIGNGFSELNDAEDQAERFRDQVKAK-EAGDDEAMFYDDDYVIALEYGMPPTAGLGIGID 471
Query: 418 RLIMLLTNSKNIRDVILFPHLR 439
R++MLLT+S IRDVILFP L+
Sbjct: 472 RMVMLLTDSHTIRDVILFPTLK 493
>gi|398850053|ref|ZP_10606762.1| lysyl-tRNA synthetase (class II) [Pseudomonas sp. GM80]
gi|398249626|gb|EJN35009.1| lysyl-tRNA synthetase (class II) [Pseudomonas sp. GM80]
Length = 500
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 217/441 (49%), Positives = 313/441 (70%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + ++ K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLSEDTLAAVKTWDMGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L ++++ ++L+TKSLRPLP+K L++ E +YR RY+DLI+N+ R+ F+ R+
Sbjct: 124 ARSGKGDLYVEMTHVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNDEVRQTFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ K DF+EVETP+L PGGA AKPF THHN+L+M+MFLRIAPELYLKRL+
Sbjct: 184 QVIAHIRSFLMKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGS 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DL + ++ KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTADDLNDIDKARAIAKKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+ N +N N+T+RFELFI G E
Sbjct: 359 GFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDDNPNVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFMAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 477 LVMLLTNSPSIRDVILFPHMR 497
>gi|359300215|ref|ZP_09186054.1| lysyl-tRNA synthetase [Haemophilus [parainfluenzae] CCUG 13788]
gi|402305646|ref|ZP_10824705.1| lysine--tRNA ligase [Haemophilus sputorum HK 2154]
gi|400376759|gb|EJP29646.1| lysine--tRNA ligase [Haemophilus sputorum HK 2154]
Length = 500
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 225/447 (50%), Positives = 314/447 (70%), Gaps = 25/447 (5%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNY-DIGDIIGAKGTLF 59
ML+RVMGK +FI +QD SG +IQLY++ + + + Y + D+GDIIG KGTLF
Sbjct: 71 MLRRVMGKATFITIQDVSG-----QIQLYVARDNLPEGEYQNTVGLLDLGDIIGVKGTLF 125
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGEL+++ S L+L+TK+LRPLPNK + L++QE +YR RY+DLI NE +R+ F R++
Sbjct: 126 KTKTGELTVRASELQLLTKALRPLPNKHKGLTDQETRYRQRYLDLIANEESRRTFVIRSK 185
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
++S IR F F+EVETP+L PGGA AKPFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 186 VVSGIRQFFLDKGFIEVETPMLQVIPGGAAAKPFITHHNALDVDMYLRIAPELYLKRLVV 245
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTMIE+Y AY +YI LM TE++++K+ +D +GTT
Sbjct: 246 GGFERVFELNRNFRNEGVSVRHNPEFTMIEYYQAYADYIDLMDNTEELLRKLAIDILGTT 305
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKS-ELKK-----INPKFN 293
+ Y + DF K FE++T+ +AI KY DL N F KS E+ K I +
Sbjct: 306 TVPYGEYVFDFGKPFERITMHDAIVKYGNGIKREDLDN--FEKSVEIAKGLGIEIQKSWG 363
Query: 294 QKKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELF 353
++N +FEE E +L PT++ +P EISPLAR++++ N +T+RFELF
Sbjct: 364 LGSVVN---------AIFEEVAEHQLIQPTFLMAHPAEISPLARRNDV-NPEVTDRFELF 413
Query: 354 IIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCG 413
I G EI NGFSELND E+Q+ RF+ Q+ K E + + +YD D++ ALE+G+PP +G G
Sbjct: 414 IGGREIGNGFSELNDAEDQAERFQAQVAAK-EAGDDEAMFYDDDFVVALEHGLPPTAGEG 472
Query: 414 IGVDRLIMLLTNSKNIRDVILFPHLRN 440
+G+DRL M+ N+ +IRDVILFP +R
Sbjct: 473 LGIDRLAMIYANAPSIRDVILFPAMRQ 499
>gi|406038913|ref|ZP_11046268.1| lysyl-tRNA ligase [Acinetobacter ursingii DSM 16037 = CIP 107286]
Length = 509
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 217/445 (48%), Positives = 312/445 (70%), Gaps = 24/445 (5%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G++ SF+++QD +G +IQLY+ + + K+ D+GDII A+G +
Sbjct: 76 KVAGRVMLNRGSFMVIQDMTG-----RIQLYVDRKGLPAETLETIKSLDLGDIIAAEGYI 130
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L + + +L+TKSLRPLP+KF L++ E KYR RY+DLI+NE TRK F+ R
Sbjct: 131 GRSGKGDLYVHLEGFELLTKSLRPLPDKFHGLTDTEAKYRKRYLDLIVNEETRKTFEIRA 190
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
++++ IR F+ FMEVETP++H PGGA A+PF THHN+L+M +FLRIAPELYLKRL+
Sbjct: 191 KVVAGIRAFLNNERFMEVETPMMHIIPGGASARPFETHHNALDMPLFLRIAPELYLKRLV 250
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF ++FEIN+NFRNEG+S RHNPEFTMIEFY AY +Y LM+ TE M++K+ +D +G+
Sbjct: 251 VGGFERVFEINRNFRNEGVSTRHNPEFTMIEFYQAYADYKDLMQLTENMLEKLALDILGS 310
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + YQG + F F+K+++ +AI + P++ ++ ++ FL KF Q +
Sbjct: 311 TDVPYQGEVFSFKGPFKKISMFDAILENNPEFTPENVNDREFLA--------KFTQDVLK 362
Query: 299 NNLKKDI----LQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFI 354
+K LQ ++FEET ETKL PT+IT YP E SPLAR+ N +N +IT+RFE FI
Sbjct: 363 EQVKPGFGLGKLQTIVFEETVETKLRQPTFITEYPAETSPLARR-NDDNPHITDRFEFFI 421
Query: 355 IGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGI 414
G E+ANGFSELNDP +Q+ RF+ Q+ K+ + E + +YD D++ ALEYG+PP +G GI
Sbjct: 422 GGRELANGFSELNDPIDQAERFQAQVAEKDAGDDE-AMHYDADFVEALEYGLPPTAGEGI 480
Query: 415 GVDRLIMLLTNSKNIRDVILFPHLR 439
G+DRL+ML ++ +IRDVILFPH+R
Sbjct: 481 GIDRLVMLFADAPSIRDVILFPHMR 505
>gi|398945927|ref|ZP_10671968.1| lysyl-tRNA synthetase (class II) [Pseudomonas sp. GM41(2012)]
gi|398155862|gb|EJM44291.1| lysyl-tRNA synthetase (class II) [Pseudomonas sp. GM41(2012)]
Length = 500
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 217/441 (49%), Positives = 311/441 (70%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + + K +D+GDII A GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLSEETLASVKTWDMGDIIAAVGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L ++++ ++L+TKSLRPLP+K L++ E +YR RY+DLI+NE R+ F+ R+
Sbjct: 124 ARSGKGDLYVEMTEVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEEVRQTFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ + DF+EVETP+L PGGA AKPF THHN+L+M+MFLRIAPELYLKRL+
Sbjct: 184 QVIAHIRSFLMQRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGS 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DL + ++ KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTADDLTDIEKARAIAKKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+ N +N N+T+RFELFI G E
Sbjct: 359 GFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDDNPNVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFMAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 477 LVMLLTNSPSIRDVILFPHMR 497
>gi|374702749|ref|ZP_09709619.1| lysyl-tRNA synthetase [Pseudomonas sp. S9]
Length = 499
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 218/445 (48%), Positives = 315/445 (70%), Gaps = 26/445 (5%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF++LQD +G +IQ+Y++ + + + K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGSFMVLQDMTG-----RIQVYVNRKTLPEETLAAVKTWDLGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L ++++S++L+TKSLRPLP+K L++ E +YR RY+DLI+NE R+ F+ R+
Sbjct: 124 ARSGKGDLYVEMTSVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEEVRQDFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+IS IR F+ + DF+EVETP+L PGGA AKPF THHN+L+M MFLRIAPELYLKRL+
Sbjct: 184 QVISHIRKFLAERDFLEVETPMLQTIPGGAAAKPFETHHNALDMPMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF ++FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 244 VGGFERVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGS 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYT----PQYNEIDLQNKLFLKSELKKINPKFNQ 294
T + YQG++ F + F +L++ ++I KYT Q +ID ++ K+ K +
Sbjct: 304 TDVPYQGKVFHFGEPFVRLSVFDSILKYTDVTAEQLRDIDSAREIAKKAGAKVLG----- 358
Query: 295 KKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFI 354
L K LQ+M+FEE E KL P +IT YP E+SPLAR+ N ++ ++T+RFELFI
Sbjct: 359 ---FEGLGK--LQVMIFEEMVEPKLEQPHFITQYPFEVSPLARR-NDQDPSVTDRFELFI 412
Query: 355 IGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGI 414
G EIAN +SELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP +G GI
Sbjct: 413 GGREIANAYSELNDAEDQAERFMAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGI 471
Query: 415 GVDRLIMLLTNSKNIRDVILFPHLR 439
G+DRL+MLLT++ +IRDVILFPH+R
Sbjct: 472 GIDRLVMLLTDAPSIRDVILFPHMR 496
>gi|402758330|ref|ZP_10860586.1| lysyl-tRNA ligase [Acinetobacter sp. NCTC 7422]
Length = 508
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 217/449 (48%), Positives = 316/449 (70%), Gaps = 26/449 (5%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G++ SFI++QD +G +IQLY+ + + ++ K+ D+GDII A+G +
Sbjct: 76 KVAGRVMLNRGSFIVIQDMTG-----RIQLYVDRKGLPADILETIKSLDLGDIIAAEGYI 130
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L + + +L+TKSLRPLP+KF L++ E KYR RY+DLI+NE TRK F+ R
Sbjct: 131 GRSGKGDLYVHLEGFELLTKSLRPLPDKFHGLTDTEAKYRKRYLDLIVNEETRKTFEIRA 190
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
++++ IR F+ FMEVETP++H PGGA AKPF+THHN+L+M+++LRIAPELYLKRL+
Sbjct: 191 KVVAGIRAFLTNERFMEVETPMMHVIPGGASAKPFVTHHNALDMELYLRIAPELYLKRLV 250
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF ++FEIN+NFRNEG+S RHNPEFTMIEFY AY +Y LM TE M++K+ +D +GT
Sbjct: 251 VGGFERVFEINRNFRNEGVSTRHNPEFTMIEFYQAYADYKDLMILTENMLEKLAVDILGT 310
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELK-----KINPKFN 293
T + Y + F F+K+++ +AI ++ P + ++ ++ FL ++ K+ P F
Sbjct: 311 TDVPYGEEVYSFKGPFKKISMFDAILEHNPTFTPENVNDREFLAKFIQDVLKEKVKPGFG 370
Query: 294 QKKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELF 353
K LQ ++FEET ET+L PT+IT YP E SPLAR+ N +N +IT+RFE F
Sbjct: 371 LGK---------LQTIVFEETVETQLRQPTFITEYPAETSPLARR-NDDNPHITDRFEFF 420
Query: 354 IIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCG 413
I G E+ANGFSELNDP +Q+ RF+ Q+ K+ + E + +YD D+I ALEYG+PP +G G
Sbjct: 421 IGGRELANGFSELNDPIDQAERFQAQVAEKDAGDDE-AMHYDADFIEALEYGLPPTAGQG 479
Query: 414 IGVDRLIMLLTNSKNIRDVILFPHLRNEN 442
IG+DRL+ML N+ +IRDV+LFPH+R ++
Sbjct: 480 IGIDRLVMLFANAPSIRDVLLFPHMRRKD 508
>gi|27904870|ref|NP_777996.1| lysyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
pistaciae)]
gi|31077002|sp|Q89AC5.1|SYK_BUCBP RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|27904268|gb|AAO27101.1| lysyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
pistaciae)]
Length = 500
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 237/445 (53%), Positives = 315/445 (70%), Gaps = 19/445 (4%)
Query: 3 KRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDF-KNYDIGDIIGAKGTLFKT 61
KR+MGK SF +L+D G +IQLYI + N Y F K +D+GDI+GAKG LFKT
Sbjct: 64 KRIMGKSSFFILKDFEG-----EIQLYIQENLFALNFYKQFVKKWDLGDILGAKGKLFKT 118
Query: 62 NTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQII 121
TGELSI + +KL+TK+L+PLP+KF LS+QE +YR RY+DLI N +FK R+ I
Sbjct: 119 RTGELSIHCTEIKLLTKALKPLPSKFHGLSDQETRYRQRYLDLISNRTLCSIFKIRSLIF 178
Query: 122 SSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGG 181
+IR +M K F+EVETP++ N PGGA A+PFITHHN+L + ++LRI+PELYLKRLI+GG
Sbjct: 179 INIRKYMLKKKFLEVETPMMQNIPGGASARPFITHHNTLEIDLYLRISPELYLKRLIVGG 238
Query: 182 FNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKI 241
FNKIFEINK+FRNEGIS RHNPEFTM+E Y AY+NY +M FTEK++ ++ + +G +++
Sbjct: 239 FNKIFEINKSFRNEGISTRHNPEFTMMEVYMAYSNYHDMMNFTEKLLMFLVKEIVGNSQV 298
Query: 242 DYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNNL 301
+ ++DF K F + T+ EAI KY P DL +++ + +KK+ N KK LN
Sbjct: 299 KHGTNIIDFKKKFFRCTLKEAILKYNPSIRLSDLNDEVKMNKIVKKLG--INVKKKLNAG 356
Query: 302 KKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIAN 361
+ L L +F +T E KL PT+I +YP E+SPL+R+S++ N N+ +RFELFI G EI N
Sbjct: 357 Q---LILEIFNKTVEKKLIQPTFILDYPVEVSPLSRRSDV-NKNVVDRFELFISGYEIGN 412
Query: 362 GFSELNDPEEQSVRFKNQIDLKNEIN--GELSSY-----YDTDYIHALEYGMPPASGCGI 414
GFSELND ++Q RF Q L + IN ++SS+ YD+DYI ALEYG+PP SG GI
Sbjct: 413 GFSELNDADDQKKRFLMQCKLSHNINNLNKISSFDKHILYDSDYITALEYGLPPTSGLGI 472
Query: 415 GVDRLIMLLTNSKNIRDVILFPHLR 439
G+DRL MLLTN K+IRDVI FP L+
Sbjct: 473 GIDRLTMLLTNQKSIRDVIFFPILK 497
>gi|339494816|ref|YP_004715109.1| lysyl-tRNA synthetase [Pseudomonas stutzeri ATCC 17588 = LMG 11199]
gi|338802188|gb|AEJ06020.1| lysyl-tRNA synthetase [Pseudomonas stutzeri ATCC 17588 = LMG 11199]
Length = 500
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 216/443 (48%), Positives = 313/443 (70%), Gaps = 17/443 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I F++LQD SG +IQ+Y+ + + K++D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGPFMVLQDMSG-----RIQVYVDRKTLPAEQVEAVKHFDLGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L + +++++L+TKSLRPLP+KF L++ E +YR RY+DL++NE R+ F+ R+
Sbjct: 124 ARSGKGDLYVYMNNVRLLTKSLRPLPDKFHGLTDTEQRYRQRYVDLMVNEEVRETFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
++I+ IR F+ + DF+EVETP+L PGGA AKPF THHN+L+M MFLRIAPELYLKRL+
Sbjct: 184 KVIAHIRKFLAERDFLEVETPMLQTIPGGAAAKPFETHHNALDMPMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF ++FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 244 VGGFERVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQAVLGS 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I K+ P+ + DL + ++ KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFARLSVFDSILKFNPEISASDLNDLEKARAIAKKAG-----AKLL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
+ LQ+M+FEE E KL PT+IT YP E+SPLAR+ N N N+T+RFELFI G E
Sbjct: 359 GHEGLGKLQVMIFEELVEHKLEQPTFITEYPFEVSPLARR-NDRNPNVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + ++D D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFHAQVADKDAGDDE-AMHFDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLRNE 441
L+MLLTNS +IRDVILFPH+R E
Sbjct: 477 LVMLLTNSPSIRDVILFPHMRPE 499
>gi|237807750|ref|YP_002892190.1| lysyl-tRNA synthetase [Tolumonas auensis DSM 9187]
gi|259511537|sp|C4LCP0.1|SYK_TOLAT RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|237500011|gb|ACQ92604.1| lysyl-tRNA synthetase [Tolumonas auensis DSM 9187]
Length = 513
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 218/448 (48%), Positives = 316/448 (70%), Gaps = 18/448 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF LQD G KIQ+Y++ + + + Y + FK +D+GDI+G +G +F
Sbjct: 77 MTRRIMGKASFATLQDMGG-----KIQIYVTRDDLPEGFYNEQFKKWDLGDIVGVEGYMF 131
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
+TNTGELS+ +S++L+TK+LRPLP K + L++QE + R RY+DLI NE +R+ F+ R Q
Sbjct: 132 RTNTGELSVHTTSIRLLTKALRPLPEKHKGLTDQEARCRQRYLDLIANEESRRTFQIRNQ 191
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR+F+ +FMEVETP++ PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 192 VMNGIRNFLNSKNFMEVETPMMQVIPGGASARPFVTHHNALDIDMYLRIAPELYLKRLVV 251
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF +++E+N+NFRNEGIS RHNPEFTM+EFY AY +Y LM TE+M++ + + GTT
Sbjct: 252 GGFERVYEVNRNFRNEGISVRHNPEFTMLEFYMAYADYNDLMDLTEEMLRTLAQNIHGTT 311
Query: 240 KIDY-----QGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQ 294
KI Y +G +DF + F ++T++E+I KY N++ + L+ + K +
Sbjct: 312 KIRYAKDGEEGIEIDFGQPFARMTMVESILKYG---NDVKAEELTTLEGAIAV--AKRHH 366
Query: 295 KKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFI 354
+++ + + + +FEET E L PT+IT YP +SPLAR+ N +N +T+RFE FI
Sbjct: 367 VELMKSWELGHVITAIFEETAEHMLHQPTFITEYPAAVSPLARR-NDDNPEVTDRFEFFI 425
Query: 355 IGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGI 414
G EIANGFSELND E+Q+ RF+ Q+ K E + + +YD D++ ALE+G+PP +G GI
Sbjct: 426 GGREIANGFSELNDAEDQAERFQAQVAQK-EAGDDEAMFYDADFVTALEHGLPPTAGQGI 484
Query: 415 GVDRLIMLLTNSKNIRDVILFPHLRNEN 442
G+DRL+ML TNS IRDVILFP LR N
Sbjct: 485 GIDRLVMLFTNSHTIRDVILFPALRPSN 512
>gi|167855466|ref|ZP_02478230.1| lysyl-tRNA synthetase [Haemophilus parasuis 29755]
gi|167853395|gb|EDS24645.1| lysyl-tRNA synthetase [Haemophilus parasuis 29755]
Length = 500
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 221/441 (50%), Positives = 313/441 (70%), Gaps = 13/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNY-DIGDIIGAKGTLF 59
ML+RVMGK +F+ +QD SG +IQLY++ + + + Y + D+GDIIG KGTLF
Sbjct: 71 MLRRVMGKATFVTIQDVSG-----QIQLYVARDNLPEGEYENTVGLLDLGDIIGVKGTLF 125
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGEL+++ + L+L+TK+LRPLPNK + L++QE +YR RY+DLI NE +R+ F R++
Sbjct: 126 KTKTGELTVRAAELQLLTKALRPLPNKHKGLTDQETRYRQRYLDLIANEESRRAFVIRSK 185
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
++S IR F + DF+EVETP+L PGGA AKPFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 186 VVSGIRQFFLEKDFIEVETPMLQVIPGGAAAKPFITHHNALDVDMYLRIAPELYLKRLVV 245
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTMIE+Y AY +Y LM TE++++K+ +D +GTT
Sbjct: 246 GGFERVFELNRNFRNEGVSVRHNPEFTMIEYYQAYADYHDLMDNTEELLRKLALDILGTT 305
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y + DF K FE++T+ EAI KY + DL + + K +N + + L
Sbjct: 306 TVPYGEYVFDFGKPFERITMHEAIVKYGNGISMDDLHDFDKAVAIAKGLNIEIQKSWGLG 365
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
++ I FEE E +L PT++ +P EISPLAR+ N EN +T+RFELFI G EI
Sbjct: 366 SIVNAI-----FEEVAEHQLIQPTFLMAHPAEISPLARR-NDENPEVTDRFELFIGGREI 419
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELND E+Q+ RF+ Q+ K E + + +YD +++ ALE+G+PP +G G+G+DRL
Sbjct: 420 GNGFSELNDAEDQAERFQAQVAAK-EAGDDEAMFYDDNFVVALEHGLPPTAGEGLGIDRL 478
Query: 420 IMLLTNSKNIRDVILFPHLRN 440
M+ N+ +IRDVILFP +R
Sbjct: 479 AMIFANAPSIRDVILFPAMRQ 499
>gi|323491500|ref|ZP_08096682.1| lysyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
gi|323314254|gb|EGA67336.1| lysyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
Length = 505
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 216/443 (48%), Positives = 314/443 (70%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM K F+ +Q+TSG +IQ Y + ++ K L ++ DIGDIIG KG L K+
Sbjct: 73 RVMAKRGPFLAIQETSG-----RIQAYAAKDV-QKELKEKYQGLDIGDIIGVKGALHKSG 126
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + S +L+TK+LRPLP KF L++QE++YR RY+DLI+N+++R+ F R++++S
Sbjct: 127 KGDLYVNMESYELLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNQDSREAFIIRSKLVS 186
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM ++EVETP++H PGGA A+PFITHHN+L++ M+LR+APELYLKRL++GGF
Sbjct: 187 AIRNFMSSKGYLEVETPMMHVIPGGATARPFITHHNALDIDMYLRVAPELYLKRLVVGGF 246
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
+++FEIN+NFRNEG+SPRHNPEFTM+EFY AY++Y LM TE+M+ + M+ +G+T +
Sbjct: 247 DRVFEINRNFRNEGLSPRHNPEFTMMEFYQAYSDYKDLMDLTEEMLSTVAMEVLGSTSMP 306
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y ++F ++ ++++ EAIK Y P + EI DLQ++ + + K ++ +
Sbjct: 307 YGDETVEFGGTYARMSMFEAIKHYNPDHAEIQALTEEDLQDRDKMVAIAKSVHVEVETFW 366
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E +L PT+IT YP +ISPLAR+S+ +N T+RFE FI G
Sbjct: 367 TCGQLLEEI-----FGETAEPQLIQPTFITGYPADISPLARRSD-DNPFFTDRFEFFIGG 420
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND ++Q RFK Q++ K+ + E + YYD DYI ALE+G+PP +G GIG+
Sbjct: 421 REVANGFSELNDAQDQDERFKAQVNAKDAGDDE-AMYYDADYITALEHGLPPTAGQGIGI 479
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL ML TN+ IRDVILFP +R
Sbjct: 480 DRLAMLFTNTHTIRDVILFPAMR 502
>gi|39997369|ref|NP_953320.1| lysyl-tRNA ligase [Geobacter sulfurreducens PCA]
gi|409912713|ref|YP_006891178.1| lysyl-tRNA synthetase [Geobacter sulfurreducens KN400]
gi|39984260|gb|AAR35647.1| lysyl-tRNA synthetase [Geobacter sulfurreducens PCA]
gi|298506306|gb|ADI85029.1| lysyl-tRNA synthetase [Geobacter sulfurreducens KN400]
Length = 491
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 219/445 (49%), Positives = 309/445 (69%), Gaps = 21/445 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
+ +R GK +FI +QD G++Q+Y+ + +G + F+ +DIGDI+G GT F+
Sbjct: 63 IARRSFGKAAFIQIQD-----RKGRMQVYVRKDTVGDEAFEAFETFDIGDIVGVGGTPFR 117
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGEL++ + ++L+TKSL+PLP KF L++ E +YR RY+DLI+N R+VF KR++I
Sbjct: 118 TKTGELTLNAAFIRLLTKSLQPLPEKFHGLTDVETRYRQRYVDLIVNPEVREVFVKRSRI 177
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
++ IR FM + DF+EVETP++ PGGA A+PF+THHN+L+M++FLRIAPELYLKRL++G
Sbjct: 178 VNLIREFMVRKDFLEVETPMMQPIPGGATARPFVTHHNALDMQLFLRIAPELYLKRLVVG 237
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEGIS RHNPEFTM+EFY AY + LM FTE+++ + + +GT
Sbjct: 238 GFERVFEINRNFRNEGISVRHNPEFTMMEFYQAYATFEDLMDFTEELLCHVAQEVLGTLD 297
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
YQ + F + +++L ++EAI +Y D+ K +L + Q+ L +
Sbjct: 298 FTYQEMPISFQRPWKRLAVVEAILEYG------DIDAKSLADRDLAY---AYAQRLGL-D 347
Query: 301 LKKDI----LQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L D+ L +FEE ETKL PT+IT YPTE+SPL+RKS+ ++ I +RFELFI G
Sbjct: 348 LPADVGYGKLITEIFEEVAETKLIQPTFITAYPTEVSPLSRKSD-KDPEIVDRFELFIAG 406
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+AN FSELNDP +Q RF Q+ K + + E + Y D DYI ALE+G+PP +G GIG+
Sbjct: 407 REMANAFSELNDPVDQKERFLAQVAAKAKGDDE-AHYMDEDYIRALEFGLPPTAGEGIGI 465
Query: 417 DRLIMLLTNSKNIRDVILFPHLRNE 441
DRL+MLLT+S +IRDVILFP LR E
Sbjct: 466 DRLVMLLTDSPSIRDVILFPQLRKE 490
>gi|297580790|ref|ZP_06942716.1| lysyl-tRNA synthetase [Vibrio cholerae RC385]
gi|297535206|gb|EFH74041.1| lysyl-tRNA synthetase [Vibrio cholerae RC385]
Length = 512
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 218/443 (49%), Positives = 310/443 (69%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM K F+++Q+TSG +IQ Y S E+ + L ++ DIGDIIG +G L K+
Sbjct: 80 RVMAKRGPFLVIQETSG-----RIQAYASKEV-QQELKDKYQGLDIGDIIGVQGALHKSG 133
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE++YR RY+DLI+NEN+R F R++++S
Sbjct: 134 KGDLYVNMEQFQLLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNENSRNAFIVRSKVMS 193
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM FMEVETP++H PGGA A+PFITHHN+L+M M++RIAPELYLKRL++GGF
Sbjct: 194 AIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPMYVRIAPELYLKRLVVGGF 253
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
+++FEIN+NFRNE +SPRHNPEFTM+EFY AY +Y LM TE+++ + ++ +G+T +
Sbjct: 254 DRVFEINRNFRNEVLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLGSTSMP 313
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y ++F + ++++ +AIK Y P + +I D+QN+ + S K ++
Sbjct: 314 YGEHTVEFGGKYARMSMFDAIKHYNPNHAQIQALTEEDIQNRDLMVSIAKSVHVDVEPFW 373
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E KL PT+IT YP +ISPLAR+S+ +N T+RFE FI G
Sbjct: 374 TCGQLLEEI-----FGETAEPKLMQPTFITGYPADISPLARRSD-DNPFFTDRFEFFIGG 427
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND E+Q RFK Q++ K + E + +YD DYI ALE+G+PP +G GIG+
Sbjct: 428 REVANGFSELNDAEDQDARFKAQVEAKESGDDE-AMFYDADYITALEHGLPPTAGQGIGI 486
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL+MLLTN+ IRDVILFP +R
Sbjct: 487 DRLVMLLTNTHTIRDVILFPAMR 509
>gi|114561769|ref|YP_749282.1| lysyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
gi|122300806|sp|Q087X1.1|SYK_SHEFN RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|114333062|gb|ABI70444.1| lysyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
Length = 500
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 220/443 (49%), Positives = 308/443 (69%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM K F+++QD SG +IQ Y + G +L ++ DIGDIIG KG L +
Sbjct: 68 RVMAKRGPFLVIQDVSG-----RIQAYAGKPVQG-DLKERYQGLDIGDIIGVKGQLHLSG 121
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE +YR RY+DLI+NE++R F R+++++
Sbjct: 122 KGDLYVNMEEYQLLTKALRPLPEKFHGLTDQETRYRQRYVDLIVNEDSRNAFIMRSKVVA 181
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM K +FMEVETP++H PGGA A+PF+THHN+L+M M+LRIAPELYLKRL++GGF
Sbjct: 182 AIRNFMVKKEFMEVETPMMHVIPGGASARPFVTHHNALDMAMYLRIAPELYLKRLVVGGF 241
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
++FEIN+NFRNEG+SPRHNPEFTM+EFY AY +Y LM TE+M+ I + +G+T +
Sbjct: 242 ERVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEEMLGSIAQELLGSTSMP 301
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y ++F ++ +L+++EAI+KY P I +++ F++ + K +
Sbjct: 302 YGEETVEFGGAYARLSMLEAIQKYNPDNATIQAMTYEQVKDVEFMRDLASSLGIKLEKFW 361
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET ETKL PT+IT YP +ISPLAR+ N N+ IT+RFE FI G
Sbjct: 362 TCGQLLEEI-----FGETAETKLMQPTFITGYPADISPLARR-NDNNDFITDRFEFFIGG 415
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND E+Q RFK Q+D K+ + E + +YD DYI ALE+G+PP +G GIG+
Sbjct: 416 REVANGFSELNDAEDQDNRFKAQVDAKDAGDDE-AMFYDADYITALEHGLPPTAGQGIGI 474
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL+ML TN+ IRDVILFP +R
Sbjct: 475 DRLVMLFTNTHTIRDVILFPAMR 497
>gi|71065613|ref|YP_264340.1| lysyl-tRNA synthetase [Psychrobacter arcticus 273-4]
gi|123761770|sp|Q4FSV2.1|SYK_PSYA2 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|71038598|gb|AAZ18906.1| lysyl-tRNA synthetase [Psychrobacter arcticus 273-4]
Length = 514
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 215/437 (49%), Positives = 309/437 (70%), Gaps = 12/437 (2%)
Query: 4 RVM-GKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM + +FI++QD +G +IQLY++ + + + D K+ D+GDI+G G + ++
Sbjct: 84 RVMLNRGAFIVIQDMTG-----RIQLYVARKELDEETLADIKSLDLGDIVGVSGYIGRSG 138
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + ++L+TK+LRP+PNKF L++ E +YR+R++DL+ NE TR F R+Q+IS
Sbjct: 139 KGDLYVHIEEMQLLTKALRPMPNKFHGLADVEARYRNRHLDLMTNETTRDTFMVRSQVIS 198
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
IR FM FMEVETP++H PGGA+A+PF+THHN+L+M ++LRIAPELYLKRL++GGF
Sbjct: 199 GIRKFMLNERFMEVETPMMHPIPGGAVARPFVTHHNALDMPLYLRIAPELYLKRLVVGGF 258
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
K+FEIN++FRNEG+S RHNPEFTMIEFY AY +Y LM TE++ ++ D +GTT+I
Sbjct: 259 EKVFEINRSFRNEGVSTRHNPEFTMIEFYQAYADYHDLMDLTERLFNELATDILGTTEIT 318
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNNLK 302
YQ + FE+L++ AI KY ++ + ++ +L +E K K + K
Sbjct: 319 YQEEDISLKAPFERLSMSNAIAKYAENFDMARINDRDYL-AEYASTTLKQQVKDVFGVGK 377
Query: 303 KDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIANG 362
LQ ++FEET E +L PT+IT YP E SPLAR+S+ +N IT+RFELF+ G E+ANG
Sbjct: 378 ---LQTIIFEETAEHQLRQPTFITEYPAETSPLARRSD-DNPEITDRFELFVGGRELANG 433
Query: 363 FSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLIML 422
FSELNDP +Q+ RF Q+ K+ + E + ++D +YI AL YG+PP +G GIG+DRL+ML
Sbjct: 434 FSELNDPADQAERFLGQVAEKDAGDDE-AMHFDAEYIEALSYGLPPTAGEGIGIDRLVML 492
Query: 423 LTNSKNIRDVILFPHLR 439
LT+S +IRDVILFPH+R
Sbjct: 493 LTDSASIRDVILFPHMR 509
>gi|343500579|ref|ZP_08738470.1| lysyl-tRNA synthetase [Vibrio tubiashii ATCC 19109]
gi|418480984|ref|ZP_13050036.1| lysyl-tRNA synthetase [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
gi|342820149|gb|EGU54978.1| lysyl-tRNA synthetase [Vibrio tubiashii ATCC 19109]
gi|384571429|gb|EIF01963.1| lysyl-tRNA synthetase [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
Length = 505
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 218/443 (49%), Positives = 311/443 (70%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM K F+ +Q+TSG +IQ Y + ++ K L ++ DIGDIIG KG L K+
Sbjct: 73 RVMAKRGPFLAIQETSG-----RIQAYAAKDV-QKELKEKYQGLDIGDIIGVKGALHKSG 126
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + S +L+TK+LRPLP KF L++QE++YR RY+DLI+NE++R F R++++S
Sbjct: 127 KGDLYVNMESYELLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSRNAFIVRSKLVS 186
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
SIR+FM ++EVETP++H PGGA A+PFITHHN+L++ M+LR+APELYLKRL++GGF
Sbjct: 187 SIRNFMSSKGYLEVETPMMHVIPGGATARPFITHHNALDIDMYLRVAPELYLKRLVVGGF 246
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
+++FEIN+NFRNEG+SPRHNPEFTM+EFY AY++Y LM TE+M+ MD +G+T +
Sbjct: 247 DRVFEINRNFRNEGLSPRHNPEFTMMEFYQAYSDYKDLMDLTEEMLSTAAMDVLGSTSMP 306
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y ++F + ++++ +AIK Y P + EI DLQ++ + + K ++ +
Sbjct: 307 YGDETVEFGGKYARMSMFDAIKHYNPGHAEIQALTEADLQDRDKMVAIAKSVHVEVETFW 366
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E +L PT+IT YP +ISPLAR+S+ +N T+RFE FI G
Sbjct: 367 TCGQLLEEI-----FGETAEPQLIQPTFITGYPADISPLARRSD-DNPFFTDRFEFFIGG 420
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND ++Q RFK Q++ K+ + E + YYD DYI ALE+G+PP +G GIG+
Sbjct: 421 REVANGFSELNDAQDQDERFKAQVNAKDAGDDE-AMYYDADYITALEHGLPPTAGQGIGI 479
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL ML TN+ IRDVILFP +R
Sbjct: 480 DRLAMLFTNTHTIRDVILFPAMR 502
>gi|359394125|ref|ZP_09187178.1| Lysyl-tRNA synthetase [Halomonas boliviensis LC1]
gi|357971372|gb|EHJ93817.1| Lysyl-tRNA synthetase [Halomonas boliviensis LC1]
Length = 503
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 220/440 (50%), Positives = 303/440 (68%), Gaps = 15/440 (3%)
Query: 4 RVM-GKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM + FI++QD +G +IQLY+ + + + D K++DIGDI+ A G + K+
Sbjct: 75 RVMRQRGPFIVIQDVAG-----QIQLYVDKKGLPAEVLEDVKSWDIGDIVAAHGPVHKSG 129
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TKSLRPLP+KF L++ E +YR RY+DLI+N +RKVF+ R +IS
Sbjct: 130 KGDLYVMMKEAQLLTKSLRPLPDKFHGLTDMEARYRQRYVDLIMNPQSRKVFETRAAVIS 189
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
S+R F E FMEVETP+L PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++GGF
Sbjct: 190 SMRRFFEARGFMEVETPMLQPIPGGAAARPFITHHNALDIDMYLRIAPELYLKRLVVGGF 249
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y L+ TE M++ + +G+ I+
Sbjct: 250 EKVFEINRNFRNEGLSTRHNPEFTMVEFYWAYADYRDLLDMTEAMLRTAAEEVLGSAVIE 309
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNNLK 302
YQG DF K F +LT+ +AI + + DL + ++ +K+ K + L ++
Sbjct: 310 YQGASYDFGKPFTRLTLRQAILDHGDGIADSDLDSLEAARATAEKLGIKVKESWGLGKVQ 369
Query: 303 KDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIANG 362
+I FEE E KL PT+IT YP E+SPLAR+ N N +T+RFE F+ G EIANG
Sbjct: 370 TEI-----FEEVAEHKLDQPTFITEYPAEVSPLARR-NDANPFVTDRFEFFVGGREIANG 423
Query: 363 FSELNDPEEQSVRFKNQIDLKNEINGELSS-YYDTDYIHALEYGMPPASGCGIGVDRLIM 421
FSELND E+Q+ RF+ Q K+ G+L + YYD DY+ ALEYGMPP +G GIG+DRL+M
Sbjct: 424 FSELNDAEDQAERFRAQSAEKD--AGDLEAMYYDADYVRALEYGMPPTAGEGIGIDRLVM 481
Query: 422 LLTNSKNIRDVILFPHLRNE 441
L T+S +IRDV+LFP +R E
Sbjct: 482 LFTDSASIRDVLLFPAMRPE 501
>gi|451949108|ref|YP_007469703.1| lysyl-tRNA synthetase (class II) [Desulfocapsa sulfexigens DSM
10523]
gi|451908456|gb|AGF80050.1| lysyl-tRNA synthetase (class II) [Desulfocapsa sulfexigens DSM
10523]
Length = 507
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 221/441 (50%), Positives = 310/441 (70%), Gaps = 13/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M R GK +F L D+SG +IQ+YI + +G +++ FK +DIGDI+G +G LFK
Sbjct: 66 MSMRKFGKAAFFHLVDSSG-----RIQVYIKKDALGDEIFSSFKKWDIGDIVGIEGKLFK 120
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+ L +I+KSLRPLP KF L++ E +YR RY+DLI+ +R+ FKKR +I
Sbjct: 121 TKTGELSVLADKLVMISKSLRPLPEKFHGLTDVETRYRQRYVDLIVTPQSRETFKKRVEI 180
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+ IR F+ FMEVETP++H+ PGGA AKPF THHN+L+M++FLRIAPELYLKRL++G
Sbjct: 181 VRLIREFLSNRGFMEVETPMMHSVPGGATAKPFKTHHNALDMELFLRIAPELYLKRLLVG 240
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+S RHNPEFTM+EFY AY Y LM+ TE+MI + + T +
Sbjct: 241 GFERVFEINRNFRNEGLSTRHNPEFTMLEFYQAYATYHDLMELTEEMISWLCDEVNDTME 300
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I+YQG ++ + ++++T+ EA+ + + DL + + S ++ + ++
Sbjct: 301 IEYQGTRVNLAPPWKRMTMDEALTEVA-GIDAADLADDEKVLSLAREKGIQLEEQAGPGK 359
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
K ++ +L++ E KL +PT+IT YPTE+SPLAR+ N EN ++T+RFELF+ G E+A
Sbjct: 360 AKTELFELLV-----EEKLIDPTFITAYPTEVSPLARR-NEENPDVTDRFELFVTGRELA 413
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
N FSELNDP +Q RF+ QID K + E+ S D D++ ALEYGMP A+G GIG+DRL+
Sbjct: 414 NAFSELNDPIDQRQRFQKQIDEKGN-DDEIHSVLDEDFVRALEYGMPSAAGEGIGIDRLV 472
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S +IRDVILFPHL+ E
Sbjct: 473 MLLTDSPSIRDVILFPHLKPE 493
>gi|113461618|ref|YP_719687.1| lysyl-tRNA synthetase [Haemophilus somnus 129PT]
gi|112823661|gb|ABI25750.1| lysyl-tRNA synthetase [Haemophilus somnus 129PT]
Length = 502
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 224/445 (50%), Positives = 313/445 (70%), Gaps = 15/445 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +RVMGK +FI LQD SG KIQLY++ + + + +YTD N+D+GDI+G KGTLF
Sbjct: 70 MTRRVMGKATFITLQDMSG-----KIQLYVARDNLAEGVYTDDVGNWDLGDIVGVKGTLF 124
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL+I+ + + L+TK+LRPLPNKF LS+QE +YR RY+DLI NE++R+ F R++
Sbjct: 125 KTKTNELTIRATEVHLLTKALRPLPNKFHGLSDQETRYRQRYLDLIANEDSRRTFIIRSK 184
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+I+ IR + FMEVETP+L PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 185 VIAGIREYFISKGFMEVETPMLQIIPGGASARPFITHHNALDVDMYLRIAPELYLKRLVV 244
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTM+E+Y AY +Y LM TE++++K+ +D +GTT
Sbjct: 245 GGFERVFELNRNFRNEGVSIRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLALDILGTT 304
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI--DLQNKLFLKSELKKINPKFNQKKI 297
+ Y DF K FE++T+ EAI KY + + DL + + +K+ + +
Sbjct: 305 IVPYGDLKFDFGKPFERITMHEAILKYGAEQGIVKEDLYDFDRAVAIAQKLGIEVQKSWG 364
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L +L I FEE E L PT++ +P EISPLAR+ N EN ++T+RFELFI G
Sbjct: 365 LGSLVNAI-----FEEVAEHHLIQPTFLMAHPAEISPLARR-NDENPDVTDRFELFIGGR 418
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND E+Q+ RF Q+ K E + + + D D++ ALE+G+PP +G G+G+D
Sbjct: 419 EIGNGFSELNDAEDQNERFDAQVAAK-EAGDDEAMFKDEDFVTALEHGLPPTAGEGLGID 477
Query: 418 RLIMLLTNSKNIRDVILFPHLRNEN 442
RL ML N+ +IRDVILFP ++ +N
Sbjct: 478 RLAMLFANANSIRDVILFPAMKTKN 502
>gi|269103438|ref|ZP_06156135.1| lysyl-tRNA synthetase (class II) [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268163336|gb|EEZ41832.1| lysyl-tRNA synthetase (class II) [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 500
Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust.
Identities = 218/443 (49%), Positives = 308/443 (69%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
R+M K F+ +QD +G +IQ Y S ++ K L + DIGDIIG KG L K+
Sbjct: 68 RIMAKRGPFLAIQDVTG-----RIQAYASKDV-QKELKDKYSGLDIGDIIGIKGELHKSG 121
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE++YR RY+DLI+N+++RK FK R+Q++S
Sbjct: 122 KGDLYVNMDQYELLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNDDSRKAFKIRSQVVS 181
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR FM FMEVETP++H PGGA A+PFITHHN+L++ M+LR+APELYLKRL++GGF
Sbjct: 182 AIRSFMVTKGFMEVETPMMHVIPGGATARPFITHHNALDIDMYLRVAPELYLKRLVVGGF 241
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
++FEIN+NFRNEG+SPRHNPEFTM+EFY AY +Y LM TE+M+ I ++ +G++K+
Sbjct: 242 ERVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYRDLMDLTEEMLSSIAIEVLGSSKMP 301
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEID------LQNKLFLKSELKKINPKFNQKK 296
Y ++F+ + ++++++AIK Y P + EI + ++ + K ++
Sbjct: 302 YGDFEVEFAGPYTRMSMLDAIKHYNPDHAEIQALTYEGVADRELMVKIAKSVHVDVEDFW 361
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E +L PT+IT YP +ISPLAR+ N EN IT+RFE FI G
Sbjct: 362 TCGQLLEEI-----FGETAEPQLMQPTFITEYPADISPLARR-NDENPFITDRFEFFIGG 415
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND ++Q RFK Q+D K+ + E + YYD DYI ALE+G+PP +G GIG+
Sbjct: 416 REVANGFSELNDAQDQDQRFKAQVDAKDAGDDE-AMYYDADYITALEHGLPPTAGQGIGI 474
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL+ML TN+ IRDVILFP +R
Sbjct: 475 DRLVMLFTNTHTIRDVILFPAMR 497
>gi|403050902|ref|ZP_10905386.1| lysyl-tRNA ligase [Acinetobacter bereziniae LMG 1003]
Length = 508
Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust.
Identities = 218/445 (48%), Positives = 315/445 (70%), Gaps = 22/445 (4%)
Query: 4 RVM-GKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM + SFI++QD +G +IQLY+ + + + K+ D+GDII +G + ++
Sbjct: 80 RVMLNRGSFIVIQDMTG-----RIQLYVPRKELAPEVLETVKSLDLGDIIAVQGYIGRSG 134
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TKSLRPLP+KF L++ E+KYR RY+DLI+NE TRK F+ R +++S
Sbjct: 135 KGDLYVHIEHFELLTKSLRPLPDKFHGLTDTEVKYRKRYLDLIVNEETRKTFEIRAKVVS 194
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
IR+++ FMEVETP++H PGGA A+PF THHN+L+M +FLRIAPELYLKRL++GGF
Sbjct: 195 GIRNYLTNERFMEVETPMMHVIPGGASARPFETHHNALDMPLFLRIAPELYLKRLVVGGF 254
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
++FEIN+NFRNEG+S RHNPEFTMIEFY AY +Y LM TE M++K+ +D +G+T +
Sbjct: 255 ERVFEINRNFRNEGVSTRHNPEFTMIEFYQAYADYKDLMALTEGMLEKLAIDILGSTDVP 314
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFL----KSELK-KINPKFNQKKI 297
Y + F F+K+++ +AI ++ P ++ ++ FL + ELK ++ P F +
Sbjct: 315 YGDEVYSFKGPFKKISMFDAILEHNPSLTAENVSDREFLATFVREELKEQVKPGFGLGR- 373
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
LQ ++FEET ET+L PT+IT YP E SPLAR+ N +N +IT+RFE FI G
Sbjct: 374 --------LQTIVFEETVETQLRQPTFITEYPAETSPLARR-NDDNPHITDRFEFFIGGR 424
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
E+ANGFSELNDP +Q+ RF+ Q+ K+ + E + ++D D+I ALEYG+PP +G GIG+D
Sbjct: 425 ELANGFSELNDPIDQAERFQAQVAEKDAGDDE-AMHFDADFIEALEYGLPPTAGEGIGID 483
Query: 418 RLIMLLTNSKNIRDVILFPHLRNEN 442
RL+ML N+ +IRDVILFPH+R++N
Sbjct: 484 RLVMLFANAPSIRDVILFPHMRHKN 508
>gi|149773189|dbj|BAF64769.1| Lysyl-tRNA synthase class II [Shewanella livingstonensis]
Length = 497
Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust.
Identities = 220/443 (49%), Positives = 308/443 (69%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM K F+++QD SG +IQ Y + G +L ++ DIGDIIG KG L +
Sbjct: 65 RVMAKRGPFLVIQDVSG-----RIQAYAGKPVQG-DLKERYQGLDIGDIIGVKGQLHLSG 118
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE +YR RY+DLI+NE++R F R+++++
Sbjct: 119 KGDLYVNMEEYQLLTKALRPLPEKFHGLTDQETRYRQRYVDLIVNEDSRNAFIMRSKVVA 178
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM K +FMEVETP++H PGGA A+PF+THHN+L+M M+LRIAPELYLKRL++GGF
Sbjct: 179 AIRNFMVKKEFMEVETPMMHVIPGGASARPFVTHHNALDMAMYLRIAPELYLKRLVVGGF 238
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
++FEIN+NFRNEG+SPRHNPEFTM+EFY AY +Y LM TE+M+ I + +G+T +
Sbjct: 239 ERVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEEMLGSIAQELLGSTSMP 298
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y ++F ++ +L+++EAI+KY P I +++ F++ + K +
Sbjct: 299 YGEETVEFGGAYARLSMLEAIQKYNPDNATIQAMTYEQVKDVEFMRDLASSLGIKLEKFW 358
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET ETKL PT+IT YP +ISPLAR+ N N+ IT+RFE FI G
Sbjct: 359 TCGQLLEEI-----FGETAETKLMQPTFITGYPADISPLARR-NDNNDFITDRFEFFIGG 412
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND E+Q RFK Q+D K+ + E + +YD DYI ALE+G+PP +G GIG+
Sbjct: 413 REVANGFSELNDAEDQDNRFKAQVDAKDAGDDE-AMFYDADYITALEHGLPPTAGQGIGI 471
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL+ML TN+ IRDVILFP +R
Sbjct: 472 DRLVMLFTNTHTIRDVILFPAMR 494
>gi|121996858|ref|YP_001001645.1| lysyl-tRNA synthetase [Halorhodospira halophila SL1]
gi|121588263|gb|ABM60843.1| lysyl-tRNA synthetase [Halorhodospira halophila SL1]
Length = 495
Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust.
Identities = 212/442 (47%), Positives = 310/442 (70%), Gaps = 12/442 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M KRVMGK SF LQD+SG +IQLY+ + + + Y FK +D+GDI+GA GT+F+
Sbjct: 66 MAKRVMGKASFAQLQDSSG-----RIQLYLRRDDLPEGAYAAFKGWDVGDIVGATGTIFR 120
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T GELSI+ ++L+TKSLRPLP K+ L++ EI+YR RY+DLI+NE +++VF RT++
Sbjct: 121 TKKGELSIQCEEIRLLTKSLRPLPEKWHGLNDHEIRYRQRYLDLIVNEESQRVFALRTRV 180
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
++++R F+++ FMEVETP++ PGGA A+PF+THHN+L ++LRIAPELYLKRL++G
Sbjct: 181 LAAMRRFLDERGFMEVETPMMQPIPGGAAARPFVTHHNALGRDLYLRIAPELYLKRLVVG 240
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF +++E+N+NFRNEG+S RHNPEFTM+EFY A+ +Y LM TE+M++ + +G+ +
Sbjct: 241 GFERVYEVNRNFRNEGVSTRHNPEFTMLEFYQAFADYRDLMDLTEEMLRHLAEQALGSGQ 300
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ +QG DF+ SFE++++IEA+ ++ DL + + + L
Sbjct: 301 VTWQGETYDFASSFERISLIEAVLRFNSDLGIEDLTERERAAQAAQARGIEVPPGDGLGK 360
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
+Q LFEET E +L P ++T+YP E+SPLAR + ++ TERFEL + G EIA
Sbjct: 361 -----IQAALFEETAEPRLHGPVFVTDYPKEVSPLARPLD-DDPCYTERFELIVGGREIA 414
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RF+ Q ++ + E + +YD DYI ALEYG+PP +G GIG+DRL+
Sbjct: 415 NGFSELNDAEDQAARFRAQAAERDAGDQE-AMHYDADYIRALEYGLPPTAGEGIGIDRLV 473
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLL + +IRDV+LFP +R E+
Sbjct: 474 MLLADCDSIRDVLLFPAMRPES 495
>gi|406889374|gb|EKD35580.1| hypothetical protein ACD_75C01854G0002 [uncultured bacterium]
Length = 504
Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust.
Identities = 220/442 (49%), Positives = 309/442 (69%), Gaps = 13/442 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M R GK +F + DTSG +IQ+Y+ +++G+ ++ FK +DIGDI+G +GTLFK
Sbjct: 65 MAMRKFGKAAFCTVADTSG-----QIQIYVKLDVLGEGIFETFKKWDIGDIVGVEGTLFK 119
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T GELSI+ + + +I+KSLRPLP+K+ L++ E +YR RY+DLI+ TR+ F+KR +I
Sbjct: 120 TKVGELSIQAAKIVMISKSLRPLPDKWHGLTDVETRYRQRYVDLIVTPETRETFRKRVEI 179
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I +R ++ +FMEVETP++ PGGA AKPF+THHN+LNM ++LRIAPELYLKRL++G
Sbjct: 180 IRLVREYLNDQNFMEVETPMMQPIPGGATAKPFMTHHNALNMDLYLRIAPELYLKRLLVG 239
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+S RHNPEFTM+EFY AY Y L+ TE+MI I GT K
Sbjct: 240 GFERVFEINRNFRNEGLSTRHNPEFTMLEFYQAYATYTDLIALTEQMISSICEKVNGTMK 299
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQG +D + ++ LT+ +A+ + + L + + + K+ K +K
Sbjct: 300 ITYQGTEVDLTPPWKVLTMDQALIEVA-GIDPAVLADDAKVMALAKEKGIKLEEKAGPGK 358
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
K ++ +L++ E KL NPT+IT+YPTE+SPLAR+ N ++ +T+RFELFI G E+A
Sbjct: 359 AKTELFELLV-----EEKLINPTFITSYPTEVSPLARR-NDQDPTVTDRFELFITGRELA 412
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDP +Q RF+ QI + + + E+ D DYI ALEYGMP A+G GIG+DRL+
Sbjct: 413 NGFSELNDPMDQLGRFEKQIAERGD-DDEIHPELDADYIRALEYGMPSAAGEGIGIDRLV 471
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT++ +IRDVILFPHL+ E
Sbjct: 472 MLLTDAPSIRDVILFPHLKPET 493
>gi|146283093|ref|YP_001173246.1| lysyl-tRNA synthetase [Pseudomonas stutzeri A1501]
gi|145571298|gb|ABP80404.1| lysyl-tRNA synthetase [Pseudomonas stutzeri A1501]
Length = 426
Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust.
Identities = 213/437 (48%), Positives = 312/437 (71%), Gaps = 12/437 (2%)
Query: 5 VMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTNTG 64
++ + F++LQD SG +IQ+Y+ +++ K++D+GDII A+GTL ++ G
Sbjct: 1 MLNRGPFMVLQDMSG-----RIQVYVDRKMLPAEQVEAVKHFDLGDIIAAEGTLARSGKG 55
Query: 65 ELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIISSI 124
+L + +++++L+TKSLRPLP+KF L++ E +YR RY+DL++NE R+ F+ R+++I+ I
Sbjct: 56 DLYVYMNNVRLLTKSLRPLPDKFHGLTDTEQRYRQRYVDLMVNEEVRETFRVRSKVIAHI 115
Query: 125 RHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGFNK 184
R F+ + DF+EVETP+L PGGA AKPF THHN+L+M MFLRIAPELYLKRL++GGF +
Sbjct: 116 RKFLAERDFLEVETPMLQTIPGGAAAKPFETHHNALDMPMFLRIAPELYLKRLVVGGFER 175
Query: 185 IFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKIDYQ 244
+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+T + Y
Sbjct: 176 VFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQAVLGSTDVPYG 235
Query: 245 GRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNNLKKD 304
++ F + F +L++ ++I K+ P+ + DL + ++ KK K+L +
Sbjct: 236 DKVFHFGEPFARLSVFDSILKFNPEISASDLNDLEKARAIAKKAG-----AKLLGHEGLG 290
Query: 305 ILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIANGFS 364
LQ+M+FEE E KL PT+IT YP E+SPLAR+ N N N+T+RFELFI G EIAN +S
Sbjct: 291 KLQVMIFEELVEHKLEQPTFITEYPFEVSPLARR-NDRNPNVTDRFELFIGGREIANAYS 349
Query: 365 ELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLIMLLT 424
ELND E+Q+ RF Q+ K+ + E + ++D D++ ALEYGMPP +G GIG+DRL+MLLT
Sbjct: 350 ELNDAEDQAERFHAQVADKDAGDDE-AMHFDADFVRALEYGMPPTAGEGIGIDRLVMLLT 408
Query: 425 NSKNIRDVILFPHLRNE 441
NS +IRDVILFPH+R E
Sbjct: 409 NSPSIRDVILFPHMRPE 425
>gi|386390011|ref|ZP_10074808.1| lysine--tRNA ligase [Haemophilus paraphrohaemolyticus HK411]
gi|385694053|gb|EIG24679.1| lysine--tRNA ligase [Haemophilus paraphrohaemolyticus HK411]
Length = 500
Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust.
Identities = 227/447 (50%), Positives = 311/447 (69%), Gaps = 25/447 (5%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNY-DIGDIIGAKGTLF 59
ML+RVMGK +FI +QD SG +IQLY++ + + + Y + D+GDIIG KGTLF
Sbjct: 71 MLRRVMGKATFITIQDVSG-----QIQLYVARDNLPEGEYQNTVGLLDLGDIIGVKGTLF 125
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGEL+++ L+L+TKSLRPLPNK + L++QEI+YR RY+DLI NE +R+ F R++
Sbjct: 126 KTKTGELTVRARELQLLTKSLRPLPNKHKGLTDQEIRYRQRYLDLIANEESRRAFIIRSK 185
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
++S IR F DF+EVETP+L PGGA AKPFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 186 VVSGIRQFFLDKDFIEVETPMLQVIPGGAAAKPFITHHNALDVDMYLRIAPELYLKRLVV 245
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTMIE+Y AY +Y LM TE++++K+ +D +GTT
Sbjct: 246 GGFERVFELNRNFRNEGVSVRHNPEFTMIEYYQAYADYHDLMDNTEELLRKLAIDILGTT 305
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKS-ELKK-----INPKFN 293
+ Y DF K FE++T+ +AI KY DL N F KS E+ K I +
Sbjct: 306 TVPYGEYTFDFGKPFERITMHDAIVKYGNGIKREDLDN--FEKSVEIAKGLGIEIQKSWG 363
Query: 294 QKKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELF 353
++N +FEE E +L PT++ +P EISPLAR+ N EN +T+RFELF
Sbjct: 364 LGSVVN---------AIFEEVAEHQLIQPTFLMAHPAEISPLARR-NDENPEVTDRFELF 413
Query: 354 IIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCG 413
I G EI NGFSELND E+Q+ RF Q+ K E + + ++D D++ ALE+G+PP +G G
Sbjct: 414 IGGREIGNGFSELNDAEDQAERFHAQVAAK-EAGDDEAMFFDDDFVVALEHGLPPTAGEG 472
Query: 414 IGVDRLIMLLTNSKNIRDVILFPHLRN 440
+G+DRL M+ N+ +IRDVILFP +R
Sbjct: 473 LGIDRLAMIFANAPSIRDVILFPAMRQ 499
>gi|365539550|ref|ZP_09364725.1| lysyl-tRNA synthetase [Vibrio ordalii ATCC 33509]
Length = 510
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 218/443 (49%), Positives = 311/443 (70%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
R+M K F+++Q+TSG +IQ Y S E+ L ++ DIGDIIG KG L K+
Sbjct: 78 RIMAKRGPFLVIQETSG-----RIQAYASKEV-QTELKEKYQGLDIGDIIGVKGALHKSG 131
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE++YR RY+DLI+NE++R F R+++++
Sbjct: 132 KGDLYVNMEEYELLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNESSRNAFIVRSKVMT 191
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM FMEVETP++H PGGA A+PFITHHN+L+M M+LRIAPELYLKRL++GGF
Sbjct: 192 AIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPMYLRIAPELYLKRLVVGGF 251
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
+++FEIN+NFRNEG+SPRHNPEFTM+EFY AY +Y LM FTE+++ + ++ +G+T +
Sbjct: 252 DRVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDFTEEILSSVALEVLGSTSMP 311
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y ++F + ++++ EAIK Y P++ +I DLQN+ + S K ++
Sbjct: 312 YGDETVEFGGQYARMSMFEAIKHYNPEHAQIQALTEQDLQNRELMVSIAKSVHVDVEPFW 371
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E KL PT+IT YP +ISPLAR+S+ N T+RFE FI G
Sbjct: 372 TCGQLLEEI-----FGETAEPKLMQPTFITGYPADISPLARRSD-NNPFFTDRFEFFIGG 425
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND ++Q RF Q++ K+ + E + +YD DY+ ALE+G+PP +G GIG+
Sbjct: 426 REVANGFSELNDAQDQDERFLAQVNAKDAGDDE-AMFYDADYVVALEHGLPPTAGQGIGI 484
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL+MLLTN+ IRDVILFP +R
Sbjct: 485 DRLVMLLTNTHTIRDVILFPAMR 507
>gi|407366212|ref|ZP_11112744.1| lysyl-tRNA ligase [Pseudomonas mandelii JR-1]
Length = 500
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 216/441 (48%), Positives = 312/441 (70%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + ++ K +D+GDII A GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLSEDTLAAVKTWDMGDIIAAVGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L ++++ ++L+TKSLRPLP+K L++ E +YR RY+DLI+NE R+ F+ R+
Sbjct: 124 ARSGKGDLYVEMTEVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEEVRQTFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ K DF+EVETP+L PGGA AKPF THHN+L+++MFLRIAPELYLKRL+
Sbjct: 184 QVIAHIRSFLMKRDFLEVETPMLQTIPGGAAAKPFETHHNALDLEMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGS 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DL + ++ KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTADDLTDIEKARAIAKKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+ N +N ++T+RFELFI G E
Sbjct: 359 GFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDDNPSVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFMAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 477 LVMLLTNSPSIRDVILFPHMR 497
>gi|452748291|ref|ZP_21948072.1| lysyl-tRNA ligase [Pseudomonas stutzeri NF13]
gi|452007872|gb|EME00124.1| lysyl-tRNA ligase [Pseudomonas stutzeri NF13]
Length = 500
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 216/443 (48%), Positives = 312/443 (70%), Gaps = 17/443 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I F++LQD SG +IQ+Y+ + + K++D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGPFMVLQDMSG-----RIQVYVDRKTLPAEQVEAVKHFDLGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L + +++++L+TKSLRPLP+KF L++ E +YR RY+DL++NE R+ F+ R+
Sbjct: 124 ARSGKGDLYVYMNNVRLLTKSLRPLPDKFHGLTDTEQRYRQRYVDLMVNEEVRETFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
++I+ IR F+ + DF+EVETP+L PGGA AKPF THHN+L+M MFLRIAPELYLKRL+
Sbjct: 184 KVIAHIRKFLAERDFLEVETPMLQTIPGGAAAKPFETHHNALDMPMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF ++FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 244 VGGFERVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQAVLGS 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I K+ P+ DL + ++ KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFARLSVFDSILKFNPEILAADLNDLEKARAIAKKAG-----AKLL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
+ LQ+M+FEE E KL PT+IT YP E+SPLAR+ N N N+T+RFELFI G E
Sbjct: 359 GHEGLGKLQVMIFEELVEHKLEQPTFITEYPFEVSPLARR-NDRNPNVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + ++D D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFHAQVADKDAGDDE-AMHFDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLRNE 441
L+MLLTNS +IRDVILFPH+R E
Sbjct: 477 LVMLLTNSPSIRDVILFPHMRPE 499
>gi|444919925|ref|ZP_21239769.1| Lysine--tRNA ligase [Wohlfahrtiimonas chitiniclastica SH04]
gi|444508792|gb|ELV08960.1| Lysine--tRNA ligase [Wohlfahrtiimonas chitiniclastica SH04]
Length = 503
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 214/440 (48%), Positives = 308/440 (70%), Gaps = 12/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M KR+ GK F++L+D +G IQL+++ +IG+ + +F ++DIGDIIG G + +
Sbjct: 73 MSKRLFGKGGFVVLRDQTG-----DIQLFLNTGLIGQEKFEEFTHWDIGDIIGVSGVVSR 127
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
++ GEL+++VS + L+TKSLRPLP+KF L++ E +YR RY+DLI+N R+VF+KRTQI
Sbjct: 128 SDKGELTVRVSEIDLLTKSLRPLPDKFHGLTDIEARYRQRYVDLIVNMEAREVFRKRTQI 187
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+ +IR+F + F EVETP++H PGGA AKPFITHHN+L+M+ +LRIAPELYLKRL++G
Sbjct: 188 MRTIRNFFDSKGFEEVETPMMHPIPGGANAKPFITHHNALDMEFYLRIAPELYLKRLVVG 247
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G K++E+N+NFRNEG+S RHNPEFTM+E+Y AY +Y +M FT++++ + M+ G+T+
Sbjct: 248 GMEKVYEVNRNFRNEGVSTRHNPEFTMVEWYWAYADYQDMMNFTDELMTTLAMEVTGSTE 307
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQG LDFSK ++T+ E+I Y P+ DL + + I KF
Sbjct: 308 VPYQGLTLDFSKPATRMTVQESIIHYYPEAKAFDLDTREGVAQLATSIGIKFKDSDGWGK 367
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
+ +I F+E E L PT+IT YP+E+SPLARK N +N IT+RFE FI G E+
Sbjct: 368 ILMEI-----FDEKVEENLMQPTFITAYPSEVSPLARK-NDDNPLITDRFEYFIGGREVG 421
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELND E+Q RF Q+ K+ + E + + D D+I ALEYG+PP +G GIG+DRL+
Sbjct: 422 NGYSELNDAEDQYQRFMAQVAEKDSGDDE-AMHLDKDFITALEYGLPPTAGEGIGIDRLV 480
Query: 421 MLLTNSKNIRDVILFPHLRN 440
M+ + +IRDV+LFPH+RN
Sbjct: 481 MIFADVASIRDVLLFPHMRN 500
>gi|388543659|ref|ZP_10146949.1| lysyl-tRNA ligase [Pseudomonas sp. M47T1]
gi|388278216|gb|EIK97788.1| lysyl-tRNA ligase [Pseudomonas sp. M47T1]
Length = 500
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 216/441 (48%), Positives = 312/441 (70%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + + K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLPEETLASVKTWDMGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L ++++S++L+TKSLRPLP+K L++ E +YR RY+DLI+NE R F+ R+
Sbjct: 124 ARSGKGDLYVEMTSVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEEVRDTFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR+F+ K DF+EVETP+L PGGA AKPF THHN+L++ MFLRIAPELYLKRL+
Sbjct: 184 QVIAHIRNFLMKRDFLEVETPMLQTIPGGAAAKPFETHHNALDLPMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY A+ +Y M TE++ +++ +G+
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAHADYEDNMDLTEELFRELAQLVLGS 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DL + ++ KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTAADLTDIDKARAIAKKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+ N +N N+T+RFELFI G E
Sbjct: 359 GFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDDNPNVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND ++Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAQDQAERFMAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 477 LVMLLTNSPSIRDVILFPHMR 497
>gi|148653258|ref|YP_001280351.1| lysyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
gi|229559862|sp|A5WFG0.1|SYK_PSYWF RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|148572342|gb|ABQ94401.1| lysyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
Length = 510
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 213/437 (48%), Positives = 309/437 (70%), Gaps = 12/437 (2%)
Query: 4 RVM-GKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM + +FI++QD +G +IQLY++ + + ++ K+ D+GDIIG G + ++
Sbjct: 82 RVMLNRGAFIVIQDMTG-----RIQLYVARKELDEDSLALIKSLDLGDIIGVSGYIGRSG 136
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + + L+TKSLRP+PNKF L++ E +YR+R++DL+ NE++R F R+Q+IS
Sbjct: 137 KGDLYVHIEQITLLTKSLRPMPNKFHGLADTEARYRNRHLDLMTNESSRNTFMIRSQVIS 196
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
IR FM FMEVETP++H PGGA+A+PFITHHN+L+M ++LRIAPELYLKRL++GGF
Sbjct: 197 GIRKFMLNERFMEVETPMMHPIPGGAVARPFITHHNALDMPLYLRIAPELYLKRLVVGGF 256
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
++FEIN++FRNEG+S RHNPEFTMIEFY AY +Y LM TE++ ++ MD +GTT++
Sbjct: 257 ERVFEINRSFRNEGVSTRHNPEFTMIEFYQAYADYKDLMDLTERLFNQLAMDILGTTELT 316
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNNLK 302
YQ + F +L++ +AI +Y ++ + ++ +L + + ++++
Sbjct: 317 YQEETISLKAPFARLSMTDAIAQYAEGFDMSKVADRDYLADYAQNV----LKQQVKEGFG 372
Query: 303 KDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIANG 362
LQ ++FEET E KL PT+IT YP E SPLAR+ N EN IT+RFELFI G EIANG
Sbjct: 373 IGKLQTIIFEETAEHKLRQPTFITQYPAETSPLARR-NDENPEITDRFELFIGGREIANG 431
Query: 363 FSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLIML 422
FSELNDP +Q+ RF NQ+ K+ + E + ++D DYI AL YG+PP +G GIG+DRL+ML
Sbjct: 432 FSELNDPADQAERFHNQVAEKDAGDDE-AMHFDADYIEALAYGLPPTAGEGIGIDRLVML 490
Query: 423 LTNSKNIRDVILFPHLR 439
T++ +IRDVILFPH+R
Sbjct: 491 FTDAASIRDVILFPHMR 507
>gi|149910166|ref|ZP_01898812.1| lysyl-tRNA synthetase [Moritella sp. PE36]
gi|149806752|gb|EDM66716.1| lysyl-tRNA synthetase [Moritella sp. PE36]
Length = 502
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 215/443 (48%), Positives = 310/443 (69%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
R+M K F+ +QDT+G +IQ Y S ++ K D DIGDI+G G L K+
Sbjct: 68 RIMAKRGPFLAIQDTAG-----RIQAYASKDV-QKAQKADLGGLDIGDIVGITGALNKSG 121
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L ++++ L+TK+LRPLP KF L++QE++YR RY+DLI+NE +R F R+++++
Sbjct: 122 KGDLYVEMTDYVLLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNEESRNAFIVRSKLVT 181
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM D+MEVETP++H PGGA A+PFITHHN+L+ M+LR+APELYLKRL++GGF
Sbjct: 182 AIRNFMVSKDYMEVETPMMHVIPGGATARPFITHHNALDQAMYLRVAPELYLKRLVVGGF 241
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
+++FEIN+NFRNEG+SPRHNPEFTM+EFY AY +Y LM FTE+M+ + ++ +G T +
Sbjct: 242 DRVFEINRNFRNEGLSPRHNPEFTMMEFYQAYADYNDLMDFTEEMLSTVAVEVLGATAMP 301
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEID------LQNKLFLKSELKKINPKFNQKK 296
Y +++F + ++++++AIK+Y P++ I +Q++ + S K +N K +
Sbjct: 302 YGDHMVEFGGKYTRISMLDAIKQYNPEHEVIQALTNEGVQDRELMVSIAKSLNMKIEKFW 361
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E +L PT+IT YP +ISPLAR+S+ +N T+RFE FI G
Sbjct: 362 TCGQLLEEI-----FGETAEPQLIQPTFITGYPADISPLARRSD-DNPFFTDRFEFFIGG 415
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND E+Q RFK Q++ K+ + E + YYD DYI ALE+G+PP +G GIG+
Sbjct: 416 REVANGFSELNDAEDQDARFKAQVNAKDAGDDE-AMYYDADYITALEHGLPPTAGQGIGI 474
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL ML TN+ IRDVILFP +R
Sbjct: 475 DRLAMLFTNTHTIRDVILFPAMR 497
>gi|445423389|ref|ZP_21436627.1| lysine--tRNA ligase [Acinetobacter sp. WC-743]
gi|444755769|gb|ELW80344.1| lysine--tRNA ligase [Acinetobacter sp. WC-743]
Length = 508
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 218/445 (48%), Positives = 315/445 (70%), Gaps = 22/445 (4%)
Query: 4 RVM-GKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM + SFI++QD +G +IQLY+ + + + K+ D+GDII +G + ++
Sbjct: 80 RVMLNRGSFIVIQDMTG-----RIQLYVPRKELAPEVLETVKSLDLGDIIAVQGYIGRSG 134
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TKSLRPLP+KF L++ E+KYR RY+DLI+NE TRK F+ R +++S
Sbjct: 135 KGDLYVHIEHFELLTKSLRPLPDKFHGLTDTEVKYRKRYLDLIVNEETRKTFEIRAKVVS 194
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
IR+++ FMEVETP++H PGGA A+PF THHN+L+M +FLRIAPELYLKRL++GGF
Sbjct: 195 GIRNYLTNERFMEVETPMMHVIPGGASARPFETHHNALDMPLFLRIAPELYLKRLVVGGF 254
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
++FEIN+NFRNEG+S RHNPEFTMIEFY AY +Y LM TE M++K+ +D +G+T +
Sbjct: 255 ERVFEINRNFRNEGVSTRHNPEFTMIEFYQAYADYKDLMALTEGMLEKLAIDILGSTDVP 314
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFL----KSELK-KINPKFNQKKI 297
Y + F F+K+++ +AI ++ P ++ ++ FL + ELK ++ P F +
Sbjct: 315 YGDEVYSFKGPFKKISMFDAILEHNPCLTAENVSDREFLATFVREELKEQVKPGFGLGR- 373
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
LQ ++FEET ET+L PT+IT YP E SPLAR+ N +N +IT+RFE FI G
Sbjct: 374 --------LQTIVFEETVETQLRQPTFITEYPAETSPLARR-NDDNPHITDRFEFFIGGR 424
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
E+ANGFSELNDP +Q+ RF+ Q+ K+ + E + ++D D+I ALEYG+PP +G GIG+D
Sbjct: 425 ELANGFSELNDPIDQAERFQAQVAEKDAGDDE-AMHFDADFIEALEYGLPPTAGEGIGID 483
Query: 418 RLIMLLTNSKNIRDVILFPHLRNEN 442
RL+ML N+ +IRDVILFPH+R++N
Sbjct: 484 RLVMLFANAPSIRDVILFPHMRHKN 508
>gi|440509838|ref|YP_007347274.1| lysyl-tRNA synthetase [Candidatus Blochmannia chromaiodes str. 640]
gi|440454051|gb|AGC03543.1| lysyl-tRNA synthetase [Candidatus Blochmannia chromaiodes str. 640]
Length = 510
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 232/441 (52%), Positives = 305/441 (69%), Gaps = 15/441 (3%)
Query: 3 KRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLFKT 61
+R+MGK SFI ++D + G IQLYI++ + NLY + K +D+GDI+GA+G LF+T
Sbjct: 79 QRIMGKASFITIRD-----AEGCIQLYITSNSLATNLYDENIKQWDLGDILGARGILFRT 133
Query: 62 NTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQII 121
TGELSI ++L+TKSLRPLP+KF L+NQE KYR RY+DLIINENTRK+FK R+ +I
Sbjct: 134 RTGELSIYCKEIRLLTKSLRPLPDKFHGLNNQETKYRQRYLDLIINENTRKIFKIRSLVI 193
Query: 122 SSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGG 181
S IR FM+KN+FMEVETP++H GGAIA PFITHHN L + M+LRIAPELYLK+L+IGG
Sbjct: 194 SEIRQFMKKNNFMEVETPMMHTIAGGAIAHPFITHHNKLGIDMYLRIAPELYLKKLVIGG 253
Query: 182 FNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKI 241
F +IFEIN+NFRNEGIS HNPEFTM+E Y AY +Y ++ + +++ + +G+ I
Sbjct: 254 FERIFEINRNFRNEGISSHHNPEFTMMEIYMAYADYRDIIILVQNLLRSVTQKILGSNII 313
Query: 242 DYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNNL 301
+Y LDF F +++I EAI Y P+ ++ + S K + K L+
Sbjct: 314 NYGDYALDFKHPFTQISIKEAILYYLPETRSQNIDDICTAVSIAKSLGIKVKGYWTLHR- 372
Query: 302 KKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIAN 361
+ +++FEE E K+ PT +T+YP EISPLAR+ N N + +RFELFI G EI N
Sbjct: 373 ----IHMVIFEEVIEKKIIQPTCVTSYPIEISPLARR-NDNNPDFADRFELFIAGREIGN 427
Query: 362 GFSELNDPEEQSVRFKNQIDLKNE---INGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
GFSELNDPE+Q RF Q K + N + +YD DY+ ALEYG+PP +G GIG+DR
Sbjct: 428 GFSELNDPEDQKERFLKQAYGKKDKINNNNNVHIHYDEDYLIALEYGLPPTAGIGIGIDR 487
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
LIMLLT+S IRDVILFP LR
Sbjct: 488 LIMLLTDSHTIRDVILFPTLR 508
>gi|93006235|ref|YP_580672.1| lysyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
gi|123264560|sp|Q1QAW5.1|SYK_PSYCK RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|92393913|gb|ABE75188.1| lysyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
Length = 514
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 215/437 (49%), Positives = 310/437 (70%), Gaps = 12/437 (2%)
Query: 4 RVM-GKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM + +FI++QD +G +IQLY++ + + + D K+ D+GDI+G G + ++
Sbjct: 84 RVMLNRGAFIVIQDMTG-----RIQLYVARKELDEKTLADIKSLDLGDIVGVSGYIGRSG 138
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + ++L+TK+LRP+PNKF L++ E +YR+R++DL+ NE TR F R+Q+IS
Sbjct: 139 KGDLYVHIEEIELLTKALRPMPNKFHGLADVEARYRNRHLDLMTNETTRDTFMVRSQVIS 198
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
IR FM FMEVETP++H PGGA+A+PF+THHN+L+M ++LRIAPELYLKRL++GGF
Sbjct: 199 GIRKFMLNERFMEVETPMMHPIPGGAVARPFVTHHNALDMPLYLRIAPELYLKRLVVGGF 258
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
K+FEIN++FRNEG+S RHNPEFTMIEFY AY +Y LM TE++ ++ D +GTT+I
Sbjct: 259 EKVFEINRSFRNEGVSTRHNPEFTMIEFYQAYADYHDLMDLTERLFNELATDILGTTEIT 318
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNNLK 302
YQ + F +L++ +AI KY ++ + ++ +L +E K K + K
Sbjct: 319 YQEEAISLKAPFIRLSMSDAIAKYAENFDMNRINDREYL-AEYASTTLKQQVKDVFGVGK 377
Query: 303 KDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIANG 362
LQ ++FEET E +L PT+IT YP E SPLAR+S+ +N IT+RFELF+ G E+ANG
Sbjct: 378 ---LQTIIFEETAEHQLRQPTFITEYPAETSPLARRSD-DNPEITDRFELFVGGRELANG 433
Query: 363 FSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLIML 422
FSELNDPE+Q+ RF Q+ K+ + E + ++D +YI AL YG+PP +G GIG+DRL+ML
Sbjct: 434 FSELNDPEDQAERFLGQVAEKDAGDDE-AMHFDAEYIEALSYGLPPTAGEGIGIDRLVML 492
Query: 423 LTNSKNIRDVILFPHLR 439
LT+S +IRDVILFPH+R
Sbjct: 493 LTDSASIRDVILFPHMR 509
>gi|170718674|ref|YP_001783868.1| lysyl-tRNA synthetase [Haemophilus somnus 2336]
gi|189082960|sp|B0URW9.1|SYK_HAES2 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|168826803|gb|ACA32174.1| lysyl-tRNA synthetase [Haemophilus somnus 2336]
Length = 502
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 223/445 (50%), Positives = 313/445 (70%), Gaps = 15/445 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +RVMGK +FI LQD SG KIQLY++ + + + +YTD N+D+GDI+G KGTLF
Sbjct: 70 MTRRVMGKATFITLQDMSG-----KIQLYVARDNLAEGVYTDDVGNWDLGDIVGVKGTLF 124
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL+I+ + + L+TK+LRPLPNKF LS+QE +YR RY+DLI NE++R+ F R++
Sbjct: 125 KTKTNELTIRATEVHLLTKALRPLPNKFHGLSDQETRYRQRYLDLIANEDSRRTFIIRSK 184
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+I+ IR + FMEVETP+L PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 185 VIAGIREYFISKGFMEVETPMLQIIPGGASARPFITHHNALDVDMYLRIAPELYLKRLVV 244
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTM+E+Y AY +Y LM TE++++K+ +D +GTT
Sbjct: 245 GGFERVFELNRNFRNEGVSIRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLALDILGTT 304
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI--DLQNKLFLKSELKKINPKFNQKKI 297
+ Y DF K FE++T+ EAI KY + + DL + + +K+ + +
Sbjct: 305 IVPYGDLKFDFGKPFERITMHEAILKYGAEQGIVKEDLYDFDRAVAVAQKLGIEVQKSWG 364
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L +L I FEE E L PT++ +P EISPLAR+ N EN ++T+RFELFI G
Sbjct: 365 LGSLVNAI-----FEEVAEHHLIQPTFLMAHPAEISPLARR-NDENPDVTDRFELFIGGR 418
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND E+Q+ RF Q+ K E + + + D D++ ALE+G+PP +G G+G+D
Sbjct: 419 EIGNGFSELNDAEDQNERFDAQVAAK-EAGDDEAMFKDEDFVTALEHGLPPTAGEGLGID 477
Query: 418 RLIMLLTNSKNIRDVILFPHLRNEN 442
RL ML N+ +IRDVILFP ++ ++
Sbjct: 478 RLAMLFANANSIRDVILFPAMKTKS 502
>gi|407695355|ref|YP_006820143.1| lysyl-tRNA synthetase [Alcanivorax dieselolei B5]
gi|407252693|gb|AFT69800.1| Lysyl-tRNA synthetase [Alcanivorax dieselolei B5]
Length = 499
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 211/438 (48%), Positives = 313/438 (71%), Gaps = 17/438 (3%)
Query: 5 VMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTNTG 64
++ + +F +LQD SG +IQ+Y S K++ D K++D+GDI+G +G L K+ G
Sbjct: 78 MLDRKAFKVLQDMSG-----RIQIYAS-----KDVQKDTKHWDLGDIVGVRGKLCKSGKG 127
Query: 65 ELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIISSI 124
+L + + +L+TK+LRPLP K + L++ E +YR RY+DLI+N+++R+ F+ R+Q+++ I
Sbjct: 128 DLYVMMDDYRLLTKALRPLPEKHKGLTDTEARYRQRYVDLIVNDDSRRAFQIRSQVVAGI 187
Query: 125 RHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGFNK 184
R+++ F+E ETP+L PGGA A+PFITHHNSL++ M+LRIAPELYLKRL++GGF K
Sbjct: 188 RNYLVAQGFIEAETPMLQVIPGGATARPFITHHNSLDLDMYLRIAPELYLKRLVVGGFEK 247
Query: 185 IFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKIDYQ 244
+FEIN+NFRNEG+S RHNPEFTM+EFY AY Y LM TE M++ + D +GTT+I YQ
Sbjct: 248 VFEINRNFRNEGLSTRHNPEFTMLEFYQAYAGYQDLMDLTEDMLRTLARDVLGTTEIQYQ 307
Query: 245 GRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNNLKKD 304
G + DF K F +L++ ++I ++ P + +L ++ + + + K + L K
Sbjct: 308 GEVYDFGKPFARLSVFDSILQFNPDMDAAELADEQGARRIAEGLGIPL---KPIWGLGK- 363
Query: 305 ILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIANGFS 364
+Q+ +FE+T E +L +PT+IT+YPTE+SPLAR+ + +N +TERFE F+ G EIANGFS
Sbjct: 364 -VQIEIFEKTVEHRLKDPTFITDYPTEVSPLARRRD-DNPFVTERFEFFVGGREIANGFS 421
Query: 365 ELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLIMLLT 424
ELND E+Q+ RFK Q+ + E + + ++D DYI ALE+G+PP +G GIG+DRL+ML T
Sbjct: 422 ELNDAEDQAERFKQQV-AEKEAGDDEAMFFDEDYITALEHGLPPTAGEGIGIDRLVMLFT 480
Query: 425 NSKNIRDVILFPHLRNEN 442
NS +IRDVILFPH+R +
Sbjct: 481 NSPSIRDVILFPHMRPQG 498
>gi|89072537|ref|ZP_01159109.1| lysyl-tRNA synthetase [Photobacterium sp. SKA34]
gi|89051641|gb|EAR57094.1| lysyl-tRNA synthetase [Photobacterium sp. SKA34]
Length = 501
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 218/446 (48%), Positives = 311/446 (69%), Gaps = 20/446 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
R+M K F+ +QD SG +IQ Y S ++ K L + DIGDIIG KGTL K+
Sbjct: 68 RIMAKRGPFLAIQDVSG-----RIQAYASKDV-QKELKEKYSGLDIGDIIGIKGTLHKSG 121
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE++YR RY+DLI+N+++R F R++++S
Sbjct: 122 KGDLYVNMDEYELLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNDDSRHAFVVRSKVVS 181
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR FM FMEVETP++H PGGA A+PFITHHN+L++ M+LR+APELYLKRL++GGF
Sbjct: 182 AIRSFMVTKGFMEVETPMMHVIPGGATARPFITHHNALDIDMYLRVAPELYLKRLVVGGF 241
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
++FEIN+NFRNEG+SPRHNPEFTM+EFY AY +Y LM TE+M+ I +D +G++K+
Sbjct: 242 ERVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYNDLMDLTEEMLSSIAIDVLGSSKMP 301
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEID------LQNKLFLKSELKKINPKFNQKK 296
Y ++F+ + ++++++AIK+Y P++ EI + ++ + K ++
Sbjct: 302 YGEFEVEFAGPYTRMSMLDAIKQYNPEHEEIQALTYEGVADRELMVKIAKSVHVDVEDFW 361
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E +L PT+IT YP +ISPLAR+ N EN IT+RFE FI G
Sbjct: 362 TCGQLLEEI-----FGETAEPQLMQPTFITEYPADISPLARR-NDENPFITDRFEFFIGG 415
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND ++Q RFK Q+D K+ + E + YYD DYI ALE+G+PP +G GIG+
Sbjct: 416 REVANGFSELNDAQDQDQRFKAQVDAKDAGDDE-AMYYDADYITALEHGLPPTAGQGIGI 474
Query: 417 DRLIMLLTNSKNIRDVILFPHLRNEN 442
DRL+ML TN+ IRDVILFP +R ++
Sbjct: 475 DRLVMLFTNTHTIRDVILFPAMRPQS 500
>gi|294142344|ref|YP_003558322.1| lysyl-tRNA synthetase [Shewanella violacea DSS12]
gi|293328813|dbj|BAJ03544.1| lysyl-tRNA synthetase [Shewanella violacea DSS12]
Length = 502
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 220/443 (49%), Positives = 307/443 (69%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
R+M K F+++QD SG +IQ Y ++ K+L F+ DIGDIIG G L +
Sbjct: 68 RIMAKRGPFLVIQDVSG-----RIQAYAGKDV-QKDLKAKFQGLDIGDIIGVTGQLHLSG 121
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE +YR RY+DLI+NE +R F R++++S
Sbjct: 122 KGDLYVNMEDYQLLTKALRPLPEKFHGLTDQETRYRQRYVDLIVNEESRNAFIMRSKVVS 181
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM K +FMEVETP++H PGGA A+PFITHHN+L+++M+LR+APELYLKRL++GGF
Sbjct: 182 AIRNFMIKKEFMEVETPMMHTIPGGATARPFITHHNALDIEMYLRVAPELYLKRLVVGGF 241
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
++FEIN+NFRNEG+SPRHNPEFTM+EFY AY +Y LM TE+M+ I + G+ K+
Sbjct: 242 ERVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEEMLSSIATELCGSPKLP 301
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y +DF + +L++++AIKKY P I ++++ F+++ K I K +
Sbjct: 302 YGEHTVDFGGPYARLSMLDAIKKYCPDNETIQSMTYEEVKDVEFMRNLAKSIGMKIEKFW 361
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E L PT+IT YP +ISPLAR+ N EN+ IT+RFE FI G
Sbjct: 362 TCGQLLEEI-----FGETAEPHLMQPTFITGYPADISPLARR-NDENHFITDRFEFFIGG 415
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND E+Q RFK Q+ K+ + E + +YD DYI ALE+G+PP +G GIG+
Sbjct: 416 REVANGFSELNDAEDQDQRFKAQVAAKDAGDDE-AMFYDADYIRALEHGLPPTAGQGIGI 474
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL+ML TN+ IRDVILFP +R
Sbjct: 475 DRLVMLFTNTHTIRDVILFPAMR 497
>gi|397687726|ref|YP_006525045.1| lysyl-tRNA ligase [Pseudomonas stutzeri DSM 10701]
gi|395809282|gb|AFN78687.1| lysyl-tRNA ligase [Pseudomonas stutzeri DSM 10701]
Length = 500
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 216/443 (48%), Positives = 312/443 (70%), Gaps = 17/443 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
++ G+I +F++LQD +G +IQ+Y+ + + K +D+GDI+ A+GTL
Sbjct: 69 KIAGRIMLNRGAFMVLQDMTG-----RIQVYVDRKGLPVETLEAIKTWDLGDIVAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L + +S+++L+TKSLRPLP+K L++ E +YR RY+DLI+NE TR F+ R+
Sbjct: 124 ARSGKGDLYVNMSAVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEETRHTFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
++I+ IR F+ + DF+EVETP+L PGGA AKPF THHN+L++ MFLRIAPELYLKRL+
Sbjct: 184 KVIAHIRKFLAERDFLEVETPMLQTIPGGAAAKPFETHHNALDLPMFLRIAPELYLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF ++FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 244 VGGFERVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQAVLGS 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ E+I +Y P + DL N L E+ K K+L
Sbjct: 304 TDVPYGDKVFHFGEPFARLSVFESILQYNPDISAADL-NDLEKAREIA----KRAGAKLL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
+ LQ+M+FEE E +L PT+IT YP E+SPLAR+ N +N N+T+RFELFI G E
Sbjct: 359 GHEGLGKLQVMIFEELVEHRLEQPTFITEYPFEVSPLARR-NDKNPNVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + ++D D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFHAQVAEKDAGDDE-AMHFDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLRNE 441
L+MLLTNS +IRDVILFPH+R E
Sbjct: 477 LVMLLTNSPSIRDVILFPHMRPE 499
>gi|157373980|ref|YP_001472580.1| lysyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
gi|189082971|sp|A8FRH9.1|SYK_SHESH RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|157316354|gb|ABV35452.1| lysyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
Length = 500
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 221/443 (49%), Positives = 310/443 (69%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM K F+++QD SG +IQ Y ++ K+L F+ DIGDIIG G L +
Sbjct: 68 RVMAKRGPFLVIQDVSG-----RIQAYAGKDV-QKDLKAKFQGLDIGDIIGVTGQLHLSG 121
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE +YR RYIDLI+NE +R+ F R++++S
Sbjct: 122 KGDLYVNMEEYELLTKALRPLPEKFHGLTDQETRYRQRYIDLIVNEESREAFIMRSKVVS 181
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM K +FMEVETP++H PGGA A+PF THHN+L++ M+LRIAPELYLKRL++GGF
Sbjct: 182 AIRNFMVKKEFMEVETPMMHTIPGGASARPFETHHNALDIAMYLRIAPELYLKRLVVGGF 241
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
++FEIN+NFRNEG+SPRHNPEFTM+EFY AY++Y LM TE+M+ I + G+ K+
Sbjct: 242 ERVFEINRNFRNEGLSPRHNPEFTMMEFYMAYSDYKDLMDLTEEMLSSIATELCGSPKLP 301
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y ++DF + +L++++AIKKY P I ++++ F+++ K + +
Sbjct: 302 YGEHVVDFGGPYARLSMLDAIKKYNPDNATIQSMTYEEVKDVEFMRNLAKSLGMTIEKFW 361
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET ET+L PT+IT YP +ISPLAR+ N +N+ IT+RFE FI G
Sbjct: 362 TCGQLLEEI-----FGETAETQLMQPTFITGYPADISPLARR-NDDNHFITDRFEFFIGG 415
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND E+Q RFK Q+D K+ + E + +YD DYI ALE+G+PP +G GIG+
Sbjct: 416 REVANGFSELNDAEDQDNRFKAQVDAKDAGDDE-AMFYDADYITALEHGLPPTAGQGIGI 474
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL+ML TN+ IRDVILFP +R
Sbjct: 475 DRLVMLFTNTHTIRDVILFPAMR 497
>gi|336124995|ref|YP_004567043.1| Lysyl-tRNA synthetase [Vibrio anguillarum 775]
gi|335342718|gb|AEH34001.1| Lysyl-tRNA synthetase [Vibrio anguillarum 775]
Length = 510
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 218/443 (49%), Positives = 310/443 (69%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
R+M K F+++Q+TSG +IQ Y S E+ L ++ DIGDIIG KG L K+
Sbjct: 78 RIMAKRGPFLVIQETSG-----RIQAYASKEV-QTELKEKYQGLDIGDIIGVKGALHKSG 131
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE++YR RY+DLI+NE++R F R+++++
Sbjct: 132 KGDLYVNMEEYELLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNESSRNAFIVRSKVMT 191
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM FMEVETP++H PGGA A+PFITHHN+L+M M+LRIAPELYLKRL++GGF
Sbjct: 192 AIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPMYLRIAPELYLKRLVVGGF 251
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
+++FEIN+NFRNEG+SPRHNPEFTM+EFY AY +Y LM FTE+++ + + +G+T +
Sbjct: 252 DRVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYNDLMDFTEELLSTVAQEVLGSTSMP 311
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y ++F + ++++ EAIK Y P++ +I DLQN+ + S K ++
Sbjct: 312 YGDETVEFGGQYARMSMFEAIKHYNPEHAQIQALTEQDLQNRELMVSIAKSVHVDVEPFW 371
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E KL PT+IT YP +ISPLAR+S+ N T+RFE FI G
Sbjct: 372 TCGQLLEEI-----FGETAEPKLMQPTFITGYPADISPLARRSD-NNPFFTDRFEFFIGG 425
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND ++Q RF Q++ K+ + E + +YD DY+ ALE+G+PP +G GIG+
Sbjct: 426 REVANGFSELNDAQDQDERFLAQVNAKDAGDDE-AMFYDADYVVALEHGLPPTAGQGIGI 484
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL+MLLTN+ IRDVILFP +R
Sbjct: 485 DRLVMLLTNTHTIRDVILFPAMR 507
>gi|408483439|ref|ZP_11189658.1| lysyl-tRNA ligase [Pseudomonas sp. R81]
Length = 499
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 217/441 (49%), Positives = 311/441 (70%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + + K +D+GDII A+GTL
Sbjct: 68 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLPEETLASVKTWDMGDIIAAEGTL 122
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L ++++ ++L+TKSLRPLP+K L++ E +YR RY+DLI+NE R F+ R+
Sbjct: 123 ARSGKGDLYVEMTHVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEEVRHTFRVRS 182
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ + DF+EVETP+L PGGA AKPF THHN+L+M+MFLRIAPELYLKRL+
Sbjct: 183 QVIAHIRTFLMQRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMFLRIAPELYLKRLV 242
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +G+
Sbjct: 243 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGS 302
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DL + ++ KK K+L
Sbjct: 303 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTADDLNDIDKARAIAKKAG-----AKVL 357
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+ N +N N+T+RFELFI G E
Sbjct: 358 GFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDDNPNVTDRFELFIGGRE 416
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 417 IANAYSELNDAEDQAERFMAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 475
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 476 LVMLLTNSPSIRDVILFPHMR 496
>gi|352104630|ref|ZP_08960445.1| lysyl-tRNA synthetase [Halomonas sp. HAL1]
gi|350598753|gb|EHA14861.1| lysyl-tRNA synthetase [Halomonas sp. HAL1]
Length = 503
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 219/440 (49%), Positives = 304/440 (69%), Gaps = 15/440 (3%)
Query: 4 RVM-GKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM + FI++QD +G +IQLY+ + + ++ D K++DIGDI+ A G + K+
Sbjct: 75 RVMRQRGPFIVIQDVAG-----QIQLYVDKKGLPADVLEDVKSWDIGDIVAAHGPVHKSG 129
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TKSLRPLP+KF L++ E +YR RY+DLI+N +RKVF+ R +IS
Sbjct: 130 KGDLYVIMKEAQLLTKSLRPLPDKFHGLTDMEARYRQRYVDLIMNPQSRKVFETRAAVIS 189
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
S+R F E FMEVETP+L PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++GGF
Sbjct: 190 SMRRFFEARGFMEVETPMLQPIPGGAAARPFITHHNALDIDMYLRIAPELYLKRLVVGGF 249
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y L+ TE M++ + +G+ I+
Sbjct: 250 EKVFEINRNFRNEGLSTRHNPEFTMVEFYWAYADYRDLLDMTEAMLRTAAEEVLGSAVIE 309
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNNLK 302
YQG DF + F +LT+ +AI + + DL + ++ +K+ K + L ++
Sbjct: 310 YQGASYDFGQPFVRLTLRQAILDHGDGIVDADLDSLEAARATAEKLGIKVKESWGLGKVQ 369
Query: 303 KDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIANG 362
+I FEE E KL PT+IT YP E+SPLAR+ N N +T+RFE F+ G EIANG
Sbjct: 370 TEI-----FEEVAEHKLDQPTFITEYPAEVSPLARR-NDANPFVTDRFEFFVGGREIANG 423
Query: 363 FSELNDPEEQSVRFKNQIDLKNEINGELSS-YYDTDYIHALEYGMPPASGCGIGVDRLIM 421
FSELND E+Q+ RF+ Q K+ G+L + YYD DY+ ALEYGMPP +G GIG+DRL+M
Sbjct: 424 FSELNDAEDQAERFRAQSAEKD--AGDLEAMYYDADYVRALEYGMPPTAGEGIGIDRLVM 481
Query: 422 LLTNSKNIRDVILFPHLRNE 441
L T+S +IRDV+LFP +R E
Sbjct: 482 LFTDSASIRDVLLFPAMRPE 501
>gi|197335462|ref|YP_002155208.1| lysyl-tRNA synthetase [Vibrio fischeri MJ11]
gi|226710932|sp|B5F9U5.1|SYK_VIBFM RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|197316952|gb|ACH66399.1| lysyl-tRNA synthetase [Vibrio fischeri MJ11]
Length = 501
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 217/443 (48%), Positives = 310/443 (69%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM K F+++Q+ SG KIQ Y + E+ K L ++ DIGDIIG KG L K+
Sbjct: 69 RVMAKRGPFLLIQEVSG-----KIQAYAAKEV-QKELKDKYQGLDIGDIIGVKGALHKSG 122
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + L+TK+LRPLP KF L++QE++YR RY+DLI+N+++R F R+++++
Sbjct: 123 KGDLYVNMEEYVLLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNDDSRHAFIVRSKVVA 182
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM FMEVETP++H PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++GGF
Sbjct: 183 AIRNFMVDKGFMEVETPMMHVIPGGASARPFVTHHNALDVDMYLRIAPELYLKRLVVGGF 242
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
++FEIN+NFRNEG+SPRHNPEFTM+EFY AY +Y LM TE+M+ + +G+ K+
Sbjct: 243 ERVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYNDLMDLTEEMLSTVATSVLGSDKMP 302
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEID------LQNKLFLKSELKKINPKFNQKK 296
Y +DF + ++++++AIK+Y P ++EI ++++ + S K ++ +
Sbjct: 303 YGEHTVDFGGKYARMSMLDAIKQYNPDHSEIQALTYEGVKDRDLMVSIAKSVHVEVESFW 362
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E KL PT+IT YP +ISPLAR+ N +N+ IT+RFE FI G
Sbjct: 363 TCGQLLEEI-----FGETAEPKLMQPTFITEYPADISPLARR-NDDNDFITDRFEFFIGG 416
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND ++Q RFK Q++ K + E + YYD DYI ALE+G+PP +G GIG+
Sbjct: 417 REVANGFSELNDAQDQDERFKAQVNAKESGDDE-AMYYDADYITALEHGLPPTAGQGIGI 475
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL+MLLTN+ IRDVILFP +R
Sbjct: 476 DRLVMLLTNTHTIRDVILFPSMR 498
>gi|400287420|ref|ZP_10789452.1| lysyl-tRNA ligase [Psychrobacter sp. PAMC 21119]
Length = 510
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 213/437 (48%), Positives = 308/437 (70%), Gaps = 12/437 (2%)
Query: 4 RVM-GKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM + SFI++QD SG +IQLY++ + + K+ D+GDI+G G + ++
Sbjct: 80 RVMLNRGSFIVIQDMSG-----RIQLYVARKELDDETRASIKSLDLGDIVGVSGYIGRSG 134
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + + L+TKSLRP+PNKF L++ E +YR+R++DL+ NE TR F R+Q++S
Sbjct: 135 KGDLYVHIEEINLLTKSLRPMPNKFHGLADVEARYRNRHLDLMTNETTRDTFMIRSQVVS 194
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
IR FM FMEVETP++H PGGA+A+PF+THHN+L+M ++LRIAPELYLKRL++GGF
Sbjct: 195 GIRKFMLNERFMEVETPMMHPIPGGAVARPFVTHHNALDMPLYLRIAPELYLKRLVVGGF 254
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
K+FEIN++FRNEG+S RHNPEFTMIEFY AY +Y LM TE++ ++ MD + TT+I
Sbjct: 255 EKVFEINRSFRNEGVSTRHNPEFTMIEFYQAYADYHDLMDLTERLFNELAMDILDTTEIT 314
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNNLK 302
YQ + F +L++ +AI KY ++ + ++ +L +E K +++ +
Sbjct: 315 YQEEAISLKAPFARLSMSDAIAKYAENFDMAHINDREYL-AEYASTTLK---QQVKDGFG 370
Query: 303 KDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIANG 362
LQ ++FEET E +L PT+IT YP E SPLAR+S+ +N IT+RFELF+ G E+ANG
Sbjct: 371 VGKLQTIIFEETAEHQLRQPTFITEYPAETSPLARRSD-DNPEITDRFELFVGGRELANG 429
Query: 363 FSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLIML 422
FSELNDP +Q+ RF+ Q+ K+ + E + ++D +YI AL YG+PP +G GIG+DRL+ML
Sbjct: 430 FSELNDPADQAERFRGQVAEKDAGDDE-AMHFDEEYIEALSYGLPPTAGEGIGIDRLVML 488
Query: 423 LTNSKNIRDVILFPHLR 439
LT+S +IRDVILFPH+R
Sbjct: 489 LTDSASIRDVILFPHMR 505
>gi|192359674|ref|YP_001982939.1| lysyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
gi|190685839|gb|ACE83517.1| lysyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
Length = 532
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 220/442 (49%), Positives = 301/442 (68%), Gaps = 20/442 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYI---SNEIIGKNLYTDFKNYDIGDIIGAKGTLF 59
R+M K F++LQD +G IQLY + E+I +N + +D+GDI+G G L
Sbjct: 107 RLMAKRGPFMVLQD-----GDGTIQLYADKAAQEVIKEN----WGVWDLGDIVGVTGALH 157
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
K+ G+L + + +L+TKSLRPLP+K+ LS+QEI+YR RY+DLI+N R F+ R+Q
Sbjct: 158 KSGKGDLYVNLEQFQLLTKSLRPLPDKYHGLSDQEIRYRQRYVDLIVNPEVRDTFRLRSQ 217
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
IS IR++M FMEVETP+LH PGGA A+PF+THHN+L+M MFLRIAPELYLKRL++
Sbjct: 218 CISFIRNYMSGRGFMEVETPMLHVIPGGASARPFVTHHNALDMDMFLRIAPELYLKRLVV 277
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y LM TE +++K+ +D G T
Sbjct: 278 GGFERVFEINRNFRNEGVSTRHNPEFTMMEFYQAYADYKDLMDLTEDLLRKLCIDVTGGT 337
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ YQ DF K F +L++ ++I Y P + + +++ K L
Sbjct: 338 TLKYQDSEYDFGKPFVRLSVFDSILHYNPDVTAEQISSVAGATQVAERLGLKVKPGTPLG 397
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
++ +I FEET E KL PT+IT YPTE+SPLAR+S+ N +T+RFE FI G E+
Sbjct: 398 KIQTEI-----FEETVEHKLDQPTFITEYPTEVSPLARRSDT-NPAVTDRFEFFIGGREL 451
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
ANGFSELND E+Q+ RF Q+ K+ + E + YYD D++ ALEYG+PP +G GIG+DRL
Sbjct: 452 ANGFSELNDAEDQAERFLEQVKAKDAGDDE-AMYYDADFVRALEYGLPPTAGEGIGIDRL 510
Query: 420 IMLLTNSKNIRDVILFPHLRNE 441
IML N+ +IRDV+LFPH+R E
Sbjct: 511 IMLFANAPSIRDVLLFPHMRPE 532
>gi|384228415|ref|YP_005620150.1| lysyl-tRNA synthetase [Buchnera aphidicola str. Ua (Uroleucon
ambrosiae)]
gi|345539348|gb|AEO08215.1| lysyl-tRNA synthetase [Buchnera aphidicola str. Ua (Uroleucon
ambrosiae)]
Length = 504
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 239/443 (53%), Positives = 309/443 (69%), Gaps = 21/443 (4%)
Query: 3 KRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLY-TDFKNYDIGDIIGAKGTLFKT 61
+R+MGK SF LQ+ G KIQ+Y++ I N Y T FK +DIGDI+G G LFKT
Sbjct: 75 RRIMGKASFCTLQNIEG-----KIQIYVNETKISSNFYHTHFKKWDIGDILGVTGVLFKT 129
Query: 62 NTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQII 121
TGELSI + +K++ KSL+PLPNKF LSNQEI+YR RY+DLI N K+FK R+ II
Sbjct: 130 RTGELSIYCNKIKILAKSLKPLPNKFHGLSNQEIRYRKRYLDLISNNTLYKIFKCRSNII 189
Query: 122 SSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGG 181
+IR+FM +NDF+EVETP+L + PGGA A+PFIT+HN +N +M+LRIAPELYLK+LIIGG
Sbjct: 190 MAIRNFMIENDFLEVETPMLQSIPGGANARPFITYHNEINAEMYLRIAPELYLKKLIIGG 249
Query: 182 FNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKI 241
F +IFE+N+NFRNEG+S RHNPEFTM+E Y AY+NY +M+ TE M+K I KI
Sbjct: 250 FERIFELNRNFRNEGVSSRHNPEFTMMEAYIAYSNYEDMMQLTENMLKNITTLIFKKNKI 309
Query: 242 DYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQN----KLFLKSELKKINPKFNQKKI 297
+ DF + F +LT+ AI ++ Q DL++ KLF +S KI K+ I
Sbjct: 310 IFHKYEFDFKQPFHRLTMKNAILQFNTQITLSDLKDLKKIKLFAESIGIKIEKKWEIGHI 369
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
N +FE+T E KL PT+IT+YP E+SPLAR+++I+ NI +RFELFI G+
Sbjct: 370 ENE---------IFEKTVEKKLIQPTFITHYPIEVSPLARRNDID-QNIADRFELFIAGH 419
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EIANGFSELND E+Q RF QI+ N + +YD DYI AL+YG+PP +G GIG+D
Sbjct: 420 EIANGFSELNDAEDQQNRFLKQIEQSNRKENQ-DIFYDQDYIEALKYGLPPTAGLGIGID 478
Query: 418 RLIMLLTNSKNIRDVILFPHLRN 440
RLIM+LTN +IRDVILFP LR+
Sbjct: 479 RLIMILTNQMSIRDVILFPTLRS 501
>gi|402699443|ref|ZP_10847422.1| lysyl-tRNA ligase [Pseudomonas fragi A22]
Length = 500
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 217/441 (49%), Positives = 311/441 (70%), Gaps = 17/441 (3%)
Query: 4 RVMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTL 58
+V G+I SF+++QD +G +IQ+Y++ + + + K +D+GDII A+GTL
Sbjct: 69 KVAGRIMLNRGSFMVIQDMTG-----RIQVYVNRKTLPEETLAAVKTWDLGDIIAAEGTL 123
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
++ G+L +++++++L+TKSLRPLP+K L++ E +YR RY+DLI+NE R F+ R+
Sbjct: 124 ARSGKGDLYVEMTNVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEEVRHTFRVRS 183
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
Q+I+ IR F+ + DF+EVETP+L PGGA AKPF THHN+L+M MFLRIAPEL+LKRL+
Sbjct: 184 QVIAHIRSFLMQRDFLEVETPMLQTIPGGAAAKPFETHHNALDMDMFLRIAPELFLKRLV 243
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
+GGF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y M TE++ +++ +GT
Sbjct: 244 VGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGT 303
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKIL 298
T + Y ++ F + F +L++ ++I KY P+ DL + ++ KK K+L
Sbjct: 304 TDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTADDLNDIDKARAIAKKAG-----AKVL 358
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ+M+FEE E KL P +IT YP E+SPLAR+ N +N N+T+RFELFI G E
Sbjct: 359 GFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARR-NDDNPNVTDRFELFIGGRE 417
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IAN +SELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP +G GIG+DR
Sbjct: 418 IANAYSELNDAEDQAERFMAQVADKDAGDDE-AMHYDADFVRALEYGMPPTAGEGIGIDR 476
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLTNS +IRDVILFPH+R
Sbjct: 477 LVMLLTNSPSIRDVILFPHMR 497
>gi|423685166|ref|ZP_17659974.1| lysyl-tRNA synthetase [Vibrio fischeri SR5]
gi|371495667|gb|EHN71262.1| lysyl-tRNA synthetase [Vibrio fischeri SR5]
Length = 501
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 217/443 (48%), Positives = 309/443 (69%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM K F+++Q+ SG KIQ Y + E+ K L ++ DIGDIIG KG L K+
Sbjct: 69 RVMAKRGPFLLIQEVSG-----KIQAYAAKEV-QKELKDKYQGLDIGDIIGVKGALHKSG 122
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + L+TK+LRPLP KF L++QE++YR RY+DLI+N+++R F R+++++
Sbjct: 123 KGDLYVNMEEYVLLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNDDSRHAFIVRSKVVA 182
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM FMEVETP++H PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++GGF
Sbjct: 183 AIRNFMVDKGFMEVETPMMHVIPGGASARPFVTHHNALDVDMYLRIAPELYLKRLVVGGF 242
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
++FEIN+NFRNEG+SPRHNPEFTM+EFY AY +Y LM TE+M+ + +G+ K+
Sbjct: 243 ERVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYNDLMDLTEEMLSTVATSVLGSDKMP 302
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEID------LQNKLFLKSELKKINPKFNQKK 296
Y +DF + ++++++AIK+Y P + EI ++++ + S K ++ +
Sbjct: 303 YGEHTVDFGGKYARMSMLDAIKQYNPDHAEIQALTYEGVKDRDLMVSIAKSVHVEVESFW 362
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E KL PT+IT YP +ISPLAR+ N +N+ IT+RFE FI G
Sbjct: 363 TCGQLLEEI-----FGETAEPKLMQPTFITEYPADISPLARR-NDDNDFITDRFEFFIGG 416
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND ++Q RFK Q++ K + E + YYD DYI ALE+G+PP +G GIG+
Sbjct: 417 REVANGFSELNDAQDQDERFKAQVNAKESGDDE-AMYYDADYITALEHGLPPTAGQGIGI 475
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL+MLLTN+ IRDVILFP +R
Sbjct: 476 DRLVMLLTNTHTIRDVILFPSMR 498
>gi|441503673|ref|ZP_20985675.1| Lysyl-tRNA synthetase (class II) [Photobacterium sp. AK15]
gi|441428749|gb|ELR66209.1| Lysyl-tRNA synthetase (class II) [Photobacterium sp. AK15]
Length = 501
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 222/442 (50%), Positives = 305/442 (69%), Gaps = 18/442 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
R+M K F+ +QD SG +IQ Y S ++ K L + DIGDIIG KG L K+
Sbjct: 68 RIMAKRGPFLAIQDVSG-----RIQAYASKDV-QKELKDKYAGLDIGDIIGVKGALHKSG 121
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE++YR RY+DLI+NE++R R++++S
Sbjct: 122 KGDLYVNMDEYELLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSRNAMMMRSKVVS 181
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR FM FMEVETP++H PGGA A+PFITHHN+L++ M+LR+APELYLKRL++GGF
Sbjct: 182 AIRDFMTTKGFMEVETPMMHVIPGGATARPFITHHNALDIDMYLRVAPELYLKRLVVGGF 241
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
++FEIN+NFRNEG+SPRHNPEFTM+EFY AY +Y LM TE+M+ I D G+ K+
Sbjct: 242 ERVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYRDLMDLTEEMLSSIAQDLCGSAKLP 301
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNNLK 302
Y ++DF + +L++++AIKKY P I + E++ IN N + L+
Sbjct: 302 YGDEMVDFGGPYPRLSMLDAIKKYNPDNETI----QKMTYDEVRDINFMRNLAESLSIAV 357
Query: 303 KDIL---QLM--LFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
+ Q++ +F ET E KL PT+IT YP +ISPLAR+ N EN IT+RFE FI G
Sbjct: 358 ESFWTCGQILEEVFGETAEPKLIQPTFITEYPADISPLARR-NDENPFITDRFEFFIGGR 416
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
E+ANGFSELND ++Q RFK Q++ K+ + E + YYD DYI ALE+G+PP +G GIG+D
Sbjct: 417 EVANGFSELNDAQDQDERFKAQVEAKDAGDDE-AMYYDADYITALEHGLPPTAGQGIGID 475
Query: 418 RLIMLLTNSKNIRDVILFPHLR 439
RL+ML TN+ IRDVILFP +R
Sbjct: 476 RLVMLFTNTHTIRDVILFPAMR 497
>gi|260771152|ref|ZP_05880079.1| lysyl-tRNA synthetase (class II) [Vibrio furnissii CIP 102972]
gi|375130069|ref|YP_004992168.1| lysyl-tRNA synthetase [Vibrio furnissii NCTC 11218]
gi|260613749|gb|EEX38941.1| lysyl-tRNA synthetase (class II) [Vibrio furnissii CIP 102972]
gi|315179242|gb|ADT86156.1| lysyl-tRNA synthetase [Vibrio furnissii NCTC 11218]
Length = 510
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 216/443 (48%), Positives = 312/443 (70%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM K F+++Q+TSG +IQ Y + ++ K L ++ DIGDIIG KG L K+
Sbjct: 78 RVMAKRGPFLVIQETSG-----RIQAYAAKDV-QKELKEKYQGLDIGDIIGVKGALHKSG 131
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE++YR RY+DLI+NE++RK F R+++++
Sbjct: 132 KGDLYVNMEEYELLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSRKAFIIRSKLVA 191
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM ++EVETP++H PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++GGF
Sbjct: 192 AIRNFMSSKGYLEVETPMMHVIPGGASARPFITHHNALDIDMYLRIAPELYLKRLVVGGF 251
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
+++FEIN+NFRNEG+SPRHNPEFTM+EFY AY +Y LM TE+M+ + M+ +G+T +
Sbjct: 252 DRVFEINRNFRNEGLSPRHNPEFTMMEFYQAYADYKDLMDLTEEMLSTVAMNVLGSTSMP 311
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEID------LQNKLFLKSELKKINPKFNQKK 296
Y +++F + ++++++AIK Y P + EI +Q++ + + K ++ +
Sbjct: 312 YGDEMVEFGGQYARMSMLDAIKHYNPDHAEIQALDYDKVQDREHMVAIAKSVHVEVEPFW 371
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E KL PT+IT YP +ISPLAR+ N + IT+RFE FI G
Sbjct: 372 TCGQLLEEI-----FGETAEPKLIQPTFITGYPADISPLARR-NDDFPFITDRFEFFIGG 425
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND E+Q RFK Q++ K+ + E + +YD DYI ALE+G+PP +G GIG+
Sbjct: 426 REVANGFSELNDAEDQDARFKAQVEAKDAGDDE-AMFYDADYITALEHGLPPTAGQGIGI 484
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL ML TNS IRDVILFP +R
Sbjct: 485 DRLAMLFTNSHTIRDVILFPAMR 507
>gi|90580578|ref|ZP_01236383.1| lysyl-tRNA synthetase [Photobacterium angustum S14]
gi|90438236|gb|EAS63422.1| lysyl-tRNA synthetase [Photobacterium angustum S14]
Length = 501
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 217/446 (48%), Positives = 310/446 (69%), Gaps = 20/446 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
R+M K F+ +QD SG +IQ Y S ++ K L + DIGDIIG KG L K+
Sbjct: 68 RIMAKRGPFLAIQDVSG-----RIQAYASKDV-QKELKEKYSGLDIGDIIGIKGALHKSG 121
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE++YR RY+DLI+N+++R F R++++S
Sbjct: 122 KGDLYVNMDEYELLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNDDSRHAFVVRSKVVS 181
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR FM FMEVETP++H PGGA A+PFITHHN+L++ M+LR+APELYLKRL++GGF
Sbjct: 182 AIRSFMVTKGFMEVETPMMHVIPGGATARPFITHHNALDIDMYLRVAPELYLKRLVVGGF 241
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
++FEIN+NFRNEG+SPRHNPEFTM+EFY AY +Y LM TE+M+ I +D +G++K+
Sbjct: 242 ERVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYNDLMDLTEEMLSSIAIDVLGSSKMP 301
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEID------LQNKLFLKSELKKINPKFNQKK 296
Y ++F+ + ++++++AIK+Y P++ EI + ++ + K ++
Sbjct: 302 YGEFEVEFAGPYTRMSMLDAIKQYNPEHAEIQALTYEGVADRELMVKIAKSVHVDVEDFW 361
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E +L PT+IT YP +ISPLAR+ N EN IT+RFE FI G
Sbjct: 362 TCGQLLEEI-----FGETAEPQLMQPTFITEYPADISPLARR-NDENPFITDRFEFFIGG 415
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND ++Q RFK Q+D K+ + E + YYD DYI ALE+G+PP +G GIG+
Sbjct: 416 REVANGFSELNDAQDQDQRFKAQVDAKDAGDDE-AMYYDADYITALEHGLPPTAGQGIGI 474
Query: 417 DRLIMLLTNSKNIRDVILFPHLRNEN 442
DRL+ML TN+ IRDVILFP +R ++
Sbjct: 475 DRLVMLFTNTHTIRDVILFPAMRPQS 500
>gi|59711060|ref|YP_203836.1| lysyl-tRNA synthetase [Vibrio fischeri ES114]
gi|75354565|sp|Q5E7P8.1|SYK_VIBF1 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|59479161|gb|AAW84948.1| lysine tRNA synthetase, inducible [Vibrio fischeri ES114]
Length = 501
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 217/443 (48%), Positives = 308/443 (69%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM K F+++Q+ SG KIQ Y + E+ K L ++ DIGDIIG KG L K+
Sbjct: 69 RVMAKRGPFLLIQEVSG-----KIQAYAAKEV-QKELKDKYQGLDIGDIIGVKGALHKSG 122
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + L+TK+LRPLP KF L++QE++YR RY+DLI+N+++R F R+++++
Sbjct: 123 KGDLYVNMEEYVLLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNDDSRHAFIVRSKVVA 182
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM FMEVETP++H PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++GGF
Sbjct: 183 AIRNFMVDKGFMEVETPMMHVIPGGASARPFVTHHNALDVDMYLRIAPELYLKRLVVGGF 242
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
++FEIN+NFRNEG+SPRHNPEFTM+EFY AY +Y LM TE+M+ + +G+ K+
Sbjct: 243 ERVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYNDLMDLTEEMLSTVATSVLGSDKMP 302
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEID------LQNKLFLKSELKKINPKFNQKK 296
Y +DF + ++++++AIK+Y P + EI ++++ + S K ++
Sbjct: 303 YGEHTVDFGGKYARMSMLDAIKQYNPDHAEIQALTYEGVKDRDLMVSIAKSVHVDVESFW 362
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E KL PT+IT YP +ISPLAR+ N +N+ IT+RFE FI G
Sbjct: 363 TCGQLLEEI-----FGETAEPKLMQPTFITEYPADISPLARR-NDDNDFITDRFEFFIGG 416
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND ++Q RFK Q++ K + E + YYD DYI ALE+G+PP +G GIG+
Sbjct: 417 REVANGFSELNDAQDQDERFKAQVNAKESGDDE-AMYYDADYITALEHGLPPTAGQGIGI 475
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL+MLLTN+ IRDVILFP +R
Sbjct: 476 DRLVMLLTNTHTIRDVILFPSMR 498
>gi|91794476|ref|YP_564127.1| lysyl-tRNA synthetase [Shewanella denitrificans OS217]
gi|123060626|sp|Q12JH2.1|SYK_SHEDO RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|91716478|gb|ABE56404.1| lysyl-tRNA synthetase [Shewanella denitrificans OS217]
Length = 500
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 219/443 (49%), Positives = 307/443 (69%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM K F+++QD SG +IQ Y + G +L ++ DIGDIIG KG L +
Sbjct: 68 RVMAKRGPFLVIQDVSG-----RIQAYAGKPVQG-DLKERYQGLDIGDIIGVKGQLHLSG 121
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE +YR RY+DLI+NE +R F R++++S
Sbjct: 122 KGDLYVNMEEYQLLTKALRPLPEKFHGLTDQETRYRQRYVDLIVNEESRNAFIMRSKVVS 181
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM K +FMEVETP++H PGGA A+PF+THHN+L+M M+LRIAPELYLKRL++GGF
Sbjct: 182 AIRNFMIKKEFMEVETPMMHVIPGGASARPFVTHHNALDMAMYLRIAPELYLKRLVVGGF 241
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
++FEIN+NFRNEG+SPRHNPEFTM+EFY AY +Y LM TE+M+ I +D +G+ ++
Sbjct: 242 ERVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYQDLMDLTEEMLSSIAIDLLGSAQMP 301
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y +DF + +L+++EAI+KY P+ I +++ F++ + K +
Sbjct: 302 YGEHTVDFGGPYARLSMLEAIQKYNPENATIQAMTYEQVKDVEFMRDLASSLGIKLEKFW 361
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E KL PT+IT YP +ISPLAR+ N N+ IT+RFE FI G
Sbjct: 362 TCGQLLEEI-----FGETAEPKLMQPTFITGYPADISPLARR-NDNNDFITDRFEFFIGG 415
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND ++Q RFK Q++ K+ + E + +YD DYI ALE+G+PP +G GIG+
Sbjct: 416 REVANGFSELNDAQDQDNRFKAQVNAKDAGDDE-AMFYDADYITALEHGLPPTAGQGIGI 474
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL+ML TN+ IRDVILFP +R
Sbjct: 475 DRLVMLFTNTHTIRDVILFPAMR 497
>gi|440288111|ref|YP_007340876.1| lysyl-tRNA synthetase (class II) [Enterobacteriaceae bacterium
strain FGI 57]
gi|440047633|gb|AGB78691.1| lysyl-tRNA synthetase (class II) [Enterobacteriaceae bacterium
strain FGI 57]
Length = 530
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 224/449 (49%), Positives = 303/449 (67%), Gaps = 25/449 (5%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDF-KNYDIGDIIGAKGTLF 59
M +RVMGK +F+ LQD G+IQLYIS + + + Y K D GDI+GA G LF
Sbjct: 100 MTRRVMGKATFLTLQDM-----GGRIQLYISAKRLNADRYDALLKLIDQGDILGATGVLF 154
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGEL++ ++L+TK+++PLP+KF L++QE +YR RY+DLI NE TR FK R+Q
Sbjct: 155 KTQTGELTLDCKDVRLLTKAVKPLPDKFHGLTDQERRYRQRYLDLIANEKTRNTFKVRSQ 214
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+S IR FM FMEVETP++ PGGA A+PFIT HN+LN MFLRI+PELYLKRL++
Sbjct: 215 IMSVIRDFMSTRHFMEVETPMMQLIPGGASARPFITRHNALNQDMFLRISPELYLKRLVV 274
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FEIN+NFRNEGISPRHNPEFTM+E Y AY +Y L+ TE + +K+ +D G T
Sbjct: 275 GGFERVFEINRNFRNEGISPRHNPEFTMMELYMAYADYNDLIDLTEALFRKVALDVTGGT 334
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYT----PQYNEIDLQNKLFLKSELKKINPK--FN 293
++ Y DF K F +LT+ EAI KY P+ E+D ++ I P+ +
Sbjct: 335 EVTYGECTFDFGKPFTRLTMKEAILKYGNDIRPE--ELDSSEPTLALAQRLGITPEVSWG 392
Query: 294 QKKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELF 353
+++ +F+ E+ L PT+IT YP E+SPLAR++++ ++ IT+RFE F
Sbjct: 393 HGRLITE---------IFDVVAESHLIQPTFITEYPAEVSPLARRNDL-HSEITDRFEFF 442
Query: 354 IIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCG 413
I G EI NGFSELND E+Q+ RF Q+ ++ + E + YYD DY+ ALEYG+PP +G G
Sbjct: 443 IGGREIGNGFSELNDAEDQAERFMAQVASRDAGDDE-AMYYDADYVTALEYGLPPTAGLG 501
Query: 414 IGVDRLIMLLTNSKNIRDVILFPHLRNEN 442
IG+DR++ML T+S IRDVILFP LR N
Sbjct: 502 IGIDRMVMLFTDSPTIRDVILFPTLRPVN 530
>gi|84393963|ref|ZP_00992703.1| lysyl-tRNA synthetase [Vibrio splendidus 12B01]
gi|84375407|gb|EAP92314.1| lysyl-tRNA synthetase [Vibrio splendidus 12B01]
Length = 510
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 217/443 (48%), Positives = 309/443 (69%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM K F+ +Q+TSG +IQ Y + ++ K L ++ DIGDIIG KG L K+
Sbjct: 78 RVMAKRGPFLAIQETSG-----RIQAYAAKDV-QKVLKEKYQGLDIGDIIGVKGALHKSG 131
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE++YR RY+DLI+NE++R F R++++S
Sbjct: 132 KGDLYVNMEEFELLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSRNTFIVRSKLVS 191
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
SIR+FM ++EVETP++H PGGA A+PFITHHN+L++ M+LR+APELYLKRL++GGF
Sbjct: 192 SIRNFMSSKGYLEVETPMMHVIPGGATARPFITHHNALDIDMYLRVAPELYLKRLVVGGF 251
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
+++FEIN+NFRNEG+SPRHNPEFTM+EFY AY++Y LM TE+M+ MD +G+T +
Sbjct: 252 DRVFEINRNFRNEGLSPRHNPEFTMMEFYQAYSDYKDLMDLTEEMLSTAAMDVLGSTSMP 311
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQ------YNEIDLQNKLFLKSELKKINPKFNQKK 296
Y ++F ++ ++++ +AIK YTP+ E DLQN+ + +++ +
Sbjct: 312 YGDETVEFGGTYARMSMFDAIKHYTPENANIQALTEDDLQNRELMVKIAEEVGLYVEKFW 371
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E +L PT+IT YP +ISPLAR+S+ N T+RFE FI G
Sbjct: 372 TCGQLLEEI-----FGETAEPQLIQPTFITGYPADISPLARRSD-SNPFFTDRFEFFIGG 425
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND ++Q RFK Q++ K+ + E + YYD DYI ALE+G+PP +G GIG+
Sbjct: 426 REVANGFSELNDAQDQDERFKAQVNAKDAGDDE-AMYYDADYITALEHGLPPTAGQGIGI 484
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL ML TN+ IRDVILFP +R
Sbjct: 485 DRLAMLFTNTHTIRDVILFPAMR 507
>gi|209694158|ref|YP_002262086.1| lysyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
gi|226710881|sp|B6EMX2.1|SYK_ALISL RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|208008109|emb|CAQ78251.1| lysyl-tRNA synthetase, heat inducible [Aliivibrio salmonicida
LFI1238]
Length = 501
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 218/443 (49%), Positives = 306/443 (69%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM K F+++Q+ SG KIQ Y S ++ K L ++ DIGDIIG KG L K+
Sbjct: 69 RVMAKRGPFLLIQEVSG-----KIQAYASKDV-QKELKEKYQGLDIGDIIGVKGALHKSG 122
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + L+TK+LRPLP KF L++QE++YR RY+DLI+NE++R F R++++S
Sbjct: 123 KGDLYVNMEEFVLLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSRTAFIIRSKVVS 182
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM FMEVETP++H PGGA A+PF+THHN+L++ M+LR+APELYLKRL++GGF
Sbjct: 183 AIRNFMVDKGFMEVETPMMHVIPGGASARPFVTHHNALDVDMYLRVAPELYLKRLVVGGF 242
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
++FEIN+NFRNEG+SPRHNPEFTM+EFY AY +Y LM TE M+ ++ + +G+ K+
Sbjct: 243 ERVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYNDLMDLTEAMLSQVAISVLGSDKMP 302
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEID------LQNKLFLKSELKKINPKFNQKK 296
Y +DF + +L++++AIK Y P++ EI +Q++ + S K ++ +
Sbjct: 303 YGEYTVDFGGKYARLSMLDAIKMYNPEHAEIQALTYDGVQDRDLMVSIAKSVHVEVESFW 362
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E KL PT+IT YP +ISPLAR+ N N IT+RFE FI G
Sbjct: 363 TCGQLLEEI-----FGETAEPKLMQPTFITEYPADISPLARR-NDNNAFITDRFEFFIGG 416
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND ++Q RFK Q+ K + E + +YD DYI ALE+G+PP +G GIG+
Sbjct: 417 REVANGFSELNDAQDQDERFKAQVSAKESGDDE-AMFYDADYITALEHGLPPTAGQGIGI 475
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL+ML TN+ IRDVILFP +R
Sbjct: 476 DRLVMLFTNTHTIRDVILFPSMR 498
>gi|407070036|ref|ZP_11100874.1| lysyl-tRNA ligase [Vibrio cyclitrophicus ZF14]
Length = 510
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 216/443 (48%), Positives = 310/443 (69%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
R+M K F+ +Q+TSG +IQ Y + ++ K L ++ DIGDIIG KG L K+
Sbjct: 78 RIMAKRGPFLAIQETSG-----RIQAYAAKDV-QKVLKEKYQGLDIGDIIGVKGALHKSG 131
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE++YR RY+DLI+NE++R F R++++S
Sbjct: 132 KGDLYVNMEEFELLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSRNTFIVRSKLVS 191
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
SIR+FM ++EVETP++H PGGA A+PFITHHN+L++ M+LR+APELYLKRL++GGF
Sbjct: 192 SIRNFMSSKGYLEVETPMMHVIPGGATARPFITHHNALDIDMYLRVAPELYLKRLVVGGF 251
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
+++FEIN+NFRNEG+SPRHNPEFTM+EFY AY++Y LM TE+M+ MD +G+T +
Sbjct: 252 DRVFEINRNFRNEGLSPRHNPEFTMMEFYQAYSDYKDLMDLTEEMLSTAAMDVLGSTSMP 311
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQ------YNEIDLQNKLFLKSELKKINPKFNQKK 296
Y ++F ++ ++++ +AIK YTP+ E DLQN+ + +++ +
Sbjct: 312 YGEETVEFGGTYARMSMFDAIKHYTPENANIQALTEDDLQNRELMVKIAEEVGLYVEKFW 371
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E +L PT+IT YP +ISPLAR+S+ +N T+RFE FI G
Sbjct: 372 TCGQLLEEI-----FGETAEPQLIQPTFITGYPADISPLARRSD-DNPFFTDRFEFFIGG 425
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND ++Q RFK Q++ K+ + E + YYD DYI ALE+G+PP +G GIG+
Sbjct: 426 REVANGFSELNDAQDQDERFKAQVNAKDAGDDE-AMYYDADYITALEHGLPPTAGQGIGI 484
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL ML TN+ IRDVILFP +R
Sbjct: 485 DRLAMLFTNTHTIRDVILFPAMR 507
>gi|86147406|ref|ZP_01065719.1| lysyl-tRNA synthetase [Vibrio sp. MED222]
gi|85834834|gb|EAQ52979.1| lysyl-tRNA synthetase [Vibrio sp. MED222]
Length = 510
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 216/443 (48%), Positives = 309/443 (69%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
R+M K F+ +Q+TSG +IQ Y + ++ K L ++ DIGDIIG KG L K+
Sbjct: 78 RIMAKRGPFLAIQETSG-----RIQAYAAKDV-QKVLKEKYQGLDIGDIIGVKGALHKSG 131
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE++YR RY+DLI+NE++R F R++++S
Sbjct: 132 KGDLYVNMEEFELLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSRNTFIVRSKLVS 191
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
SIR+FM ++EVETP++H PGGA A+PFITHHN+L++ M+LR+APELYLKRL++GGF
Sbjct: 192 SIRNFMSSKGYLEVETPMMHVIPGGATARPFITHHNALDIDMYLRVAPELYLKRLVVGGF 251
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
+++FEIN+NFRNEG+SPRHNPEFTM+EFY AY++Y LM TE+M+ MD +G+T +
Sbjct: 252 DRVFEINRNFRNEGLSPRHNPEFTMMEFYQAYSDYKDLMDLTEEMLSTAAMDVLGSTSMP 311
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQ------YNEIDLQNKLFLKSELKKINPKFNQKK 296
Y ++F ++ ++++ +AIK YTP+ E DLQN+ + +++ +
Sbjct: 312 YGDETVEFGGTYARMSMFDAIKHYTPENANIQALTEDDLQNRELMVKIAEEVGLYVEKFW 371
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E +L PT+IT YP +ISPLAR+S+ N T+RFE FI G
Sbjct: 372 TCGQLLEEI-----FGETAEPQLIQPTFITGYPADISPLARRSD-SNPFFTDRFEFFIGG 425
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND ++Q RFK Q++ K+ + E + YYD DYI ALE+G+PP +G GIG+
Sbjct: 426 REVANGFSELNDAQDQDERFKAQVNAKDAGDDE-AMYYDADYITALEHGLPPTAGQGIGI 484
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL ML TN+ IRDVILFP +R
Sbjct: 485 DRLAMLFTNTHTIRDVILFPAMR 507
>gi|218708551|ref|YP_002416172.1| lysyl-tRNA synthetase [Vibrio splendidus LGP32]
gi|218321570|emb|CAV17522.1| Lysyl-tRNA synthetase [Vibrio splendidus LGP32]
Length = 510
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 216/443 (48%), Positives = 309/443 (69%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
R+M K F+ +Q+TSG +IQ Y + ++ K L ++ DIGDIIG KG L K+
Sbjct: 78 RIMAKRGPFLAIQETSG-----RIQAYAAKDV-QKVLKEKYQGLDIGDIIGVKGALHKSG 131
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE++YR RY+DLI+NE++R F R++++S
Sbjct: 132 KGDLYVNMEEFELLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSRNTFIVRSKLVS 191
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
SIR+FM ++EVETP++H PGGA A+PFITHHN+L++ M+LR+APELYLKRL++GGF
Sbjct: 192 SIRNFMSSKGYLEVETPMMHVIPGGATARPFITHHNALDIDMYLRVAPELYLKRLVVGGF 251
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
+++FEIN+NFRNEG+SPRHNPEFTM+EFY AY++Y LM TE+M+ MD +G+T +
Sbjct: 252 DRVFEINRNFRNEGLSPRHNPEFTMMEFYQAYSDYKDLMDLTEEMLSTAAMDVLGSTSMP 311
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQ------YNEIDLQNKLFLKSELKKINPKFNQKK 296
Y ++F ++ ++++ +AIK YTP+ E DLQN+ + +++ +
Sbjct: 312 YGDETVEFGGTYARMSMFDAIKHYTPENANIQALTEDDLQNRELMVKIAEEVGLYVEKFW 371
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E +L PT+IT YP +ISPLAR+S+ N T+RFE FI G
Sbjct: 372 TCGQLLEEI-----FGETAEPQLIQPTFITGYPADISPLARRSD-SNPFFTDRFEFFIGG 425
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND ++Q RFK Q++ K+ + E + YYD DYI ALE+G+PP +G GIG+
Sbjct: 426 REVANGFSELNDAQDQDERFKAQVNAKDAGDDE-AMYYDADYITALEHGLPPTAGQGIGI 484
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL ML TN+ IRDVILFP +R
Sbjct: 485 DRLAMLFTNTHTIRDVILFPAMR 507
>gi|254360791|ref|ZP_04976939.1| lysine--tRNA ligase [Mannheimia haemolytica PHL213]
gi|452744366|ref|ZP_21944212.1| lysyl-tRNA ligase [Mannheimia haemolytica serotype 6 str. H23]
gi|153091361|gb|EDN73335.1| lysine--tRNA ligase [Mannheimia haemolytica PHL213]
gi|452087611|gb|EME03988.1| lysyl-tRNA ligase [Mannheimia haemolytica serotype 6 str. H23]
Length = 500
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 222/447 (49%), Positives = 311/447 (69%), Gaps = 25/447 (5%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
MLKRVMGK SF +QD SG IQLY++ + + ++Y + +D+GDI+G +G LF
Sbjct: 71 MLKRVMGKASFFTIQDVSGA-----IQLYVARDNLSDSVYEEKVSLWDLGDIVGVEGALF 125
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGEL+++ S ++L+TKSLRPLP+K L++ E +YR RY+DLI NE +R+ F R+Q
Sbjct: 126 KTKTGELTVRCSEVQLLTKSLRPLPDKHHGLTDLETRYRQRYLDLISNEESRRTFMIRSQ 185
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
++S IR F + DF+EVETP+L PGGA AKPFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 186 VVSGIRKFFLERDFIEVETPMLQVIPGGAAAKPFITHHNALDVDMYLRIAPELYLKRLVV 245
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTMIE+Y AY +Y LM TE++++++ +D +GTT
Sbjct: 246 GGFERVFELNRNFRNEGVSVRHNPEFTMIEYYQAYADYHDLMDNTEELLRQLALDILGTT 305
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKS-ELKK-----INPKFN 293
+ Y + DF K FE++T+ +AI KY DL + F KS E+ K I +
Sbjct: 306 DVPYGDYVFDFGKPFERITMHDAIVKYGNGIQREDLDS--FEKSVEIAKGLGIEIQKSWG 363
Query: 294 QKKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELF 353
++N +FEE E +L PT++ +P EISPLAR+ N EN +T+RFELF
Sbjct: 364 LGSVVN---------AIFEEVAEHQLIQPTFLMAHPAEISPLARR-NDENPEVTDRFELF 413
Query: 354 IIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCG 413
I G EI NGFSELND E+Q+ RF Q+ K+ + E + + D D+I ALE+G+PP +G G
Sbjct: 414 IGGREIGNGFSELNDAEDQAERFDAQVAAKDAGDDE-AMFKDEDFIVALEHGLPPTAGEG 472
Query: 414 IGVDRLIMLLTNSKNIRDVILFPHLRN 440
+G+DRL+M+ N+ +IRDVILFP +R
Sbjct: 473 LGIDRLVMIFANAPSIRDVILFPAMRQ 499
>gi|384227858|ref|YP_005619603.1| lysyl-tRNA synthetase [Buchnera aphidicola str. Ak (Acyrthosiphon
kondoi)]
gi|345538798|gb|AEO08775.1| lysyl-tRNA synthetase [Buchnera aphidicola str. Ak (Acyrthosiphon
kondoi)]
Length = 506
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 234/438 (53%), Positives = 310/438 (70%), Gaps = 13/438 (2%)
Query: 3 KRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNL-YTDFKNYDIGDIIGAKGTLFKT 61
+R+MGK SF LQD G KIQ+YI + I ++ YTDFK +DIGDI+G G LFKT
Sbjct: 77 RRIMGKASFFTLQDMEG-----KIQIYIKEKNILSDIDYTDFKKWDIGDILGVIGILFKT 131
Query: 62 NTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQII 121
TGELS+ ++K++ KSL+PLP+KF LSNQE++YR RY+DLI N VFKKR+ II
Sbjct: 132 KTGELSVYCKNIKILNKSLKPLPDKFHGLSNQELRYRKRYLDLISNNKLNDVFKKRSNII 191
Query: 122 SSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGG 181
+IR+FM +NDF+EVETP+L + PGGA A+PF+T+HN +N KM+LRIAPELYLK+LI+GG
Sbjct: 192 MAIRNFMTENDFLEVETPMLQSIPGGANARPFVTYHNEINAKMYLRIAPELYLKKLIVGG 251
Query: 182 FNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKI 241
F +IFE+N+NFRNEG+S RHNPEFTM+E Y AY++Y +M+ E + K I TK+
Sbjct: 252 FERIFELNRNFRNEGVSARHNPEFTMMEAYIAYSDYEDMMQLIENLFKNITKLLFNDTKV 311
Query: 242 DYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNNL 301
+ + DFSK F +LT+ AI ++ P DL++ ++KK KF K+
Sbjct: 312 FFHKNIFDFSKPFHRLTMKNAILQFNPTIKLSDLED----FDKIKKF-AKFIGIKVEKKW 366
Query: 302 KKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIAN 361
+ ++ +FE+T E KL PT+IT YP E+SPLAR+++I N + T+RFELFI G EI N
Sbjct: 367 GRGQIETEIFEKTVEKKLIQPTFITQYPVEVSPLARRNDI-NPDTTDRFELFIAGYEIGN 425
Query: 362 GFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLIM 421
GFSELND E+Q RF NQI N+ + + + +YD DYI AL YG+PP SG GIG+DRLIM
Sbjct: 426 GFSELNDVEDQKKRFLNQIKKSNKEDNK-NIFYDHDYIEALTYGLPPTSGLGIGIDRLIM 484
Query: 422 LLTNSKNIRDVILFPHLR 439
+LTN +IRDVILFP LR
Sbjct: 485 ILTNQVSIRDVILFPTLR 502
>gi|118581419|ref|YP_902669.1| lysyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
gi|118504129|gb|ABL00612.1| lysyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
Length = 503
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 220/441 (49%), Positives = 303/441 (68%), Gaps = 13/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
+ +R GK +FI +QD G++QLYI + IG+ + DF+ +DIGDI+G +G F+
Sbjct: 73 LARRSFGKAAFIKIQD-----RKGRLQLYIKKDEIGEQAFADFETFDIGDIVGVEGFPFR 127
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T T ELS+ ++L+ KSL PLP KF L++ E +YR RY+DLI+N +R++F KR++I
Sbjct: 128 TKTNELSLHAKKIRLLVKSLHPLPEKFHGLTDVETRYRQRYVDLIVNPESREIFIKRSRI 187
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+ IR FM DF+EVETP++ PGGA AKPFITHHN+L+M++FLRIAPELYLKRL++G
Sbjct: 188 INLIRAFMTARDFLEVETPMMQRIPGGATAKPFITHHNALDMQLFLRIAPELYLKRLVVG 247
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN+NFRNEGIS RHNPEFTM+EFY AY Y LM FTE++ + + +GT
Sbjct: 248 GMERVFEINRNFRNEGISVRHNPEFTMMEFYQAYATYEDLMNFTEELFCHVAQEVLGTLD 307
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
QGR + F + +++LT+ +AI +Y D+ K +L I + + ++
Sbjct: 308 FVNQGREISFQRPWKRLTVRDAILEYG------DIDAKKLDDRDLALIYARSIGLDLPDD 361
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
+ L + +FEE E KL PT++T YPTE+SPL+RK N N +I +RFEL + G EIA
Sbjct: 362 IGHGKLMMEIFEEVAEHKLIQPTFVTAYPTEVSPLSRK-NDHNPDIVDRFELIVGGREIA 420
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
N FSELNDP +Q RF +Q+ K + + E + Y D DYI ALEYG+PP +G GIG+DRL+
Sbjct: 421 NAFSELNDPVDQKERFLSQVAEKAKGDEE-AHYMDEDYIRALEYGLPPTAGEGIGIDRLV 479
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S +IRDVILFP LR E
Sbjct: 480 MLLTDSASIRDVILFPQLRKE 500
>gi|167622750|ref|YP_001673044.1| lysyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
gi|189082969|sp|B0TTP2.1|SYK_SHEHH RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|167352772|gb|ABZ75385.1| lysyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
Length = 501
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/443 (49%), Positives = 308/443 (69%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM K F+++QD SG +IQ Y ++ K+L F+ DIGDIIG G L +
Sbjct: 68 RVMAKRGPFLVIQDVSG-----RIQAYAGKDV-QKDLKEKFQGLDIGDIIGVTGQLHLSG 121
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE +YR RY+DLI+NE +R+ F R++++S
Sbjct: 122 KGDLYVNMEEYQLLTKALRPLPEKFHGLTDQETRYRQRYVDLIVNEQSREAFIMRSKVVS 181
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM K +FMEVETP++H+ PGGA A+PF THHN+L++ M+LRIAPELYLKRL++GGF
Sbjct: 182 AIRNFMVKKEFMEVETPMMHSIPGGASARPFATHHNALDIAMYLRIAPELYLKRLVVGGF 241
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
++FEIN+NFRNEG+SPRHNPEFTM+EFY AY ++ LM TE+M+ I + G+ ++
Sbjct: 242 ERVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADFNDLMDLTEEMLSSIATELCGSPQLP 301
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y +DF + +L++++AIKKY P I ++++ F++ K + +
Sbjct: 302 YGEHTVDFGGPYARLSMLDAIKKYNPDNATIQSMTYEEVKDVEFMRDLAKSLGMTVEKFW 361
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET ET+L PT+IT YP +ISPLAR+ N +N+ IT+RFE FI G
Sbjct: 362 TCGQLLEEI-----FGETAETQLMQPTFITGYPADISPLARR-NDDNHFITDRFEFFIGG 415
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND E+Q RFK Q+D K+ + E + +YD DYI ALE+G+PP +G GIG+
Sbjct: 416 REVANGFSELNDAEDQDRRFKAQVDAKDAGDDE-AMFYDADYITALEHGLPPTAGQGIGI 474
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL+ML TN+ IRDVILFP +R
Sbjct: 475 DRLVMLFTNTHTIRDVILFPAMR 497
>gi|251792905|ref|YP_003007631.1| lysyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
gi|247534298|gb|ACS97544.1| lysyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
Length = 502
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 216/443 (48%), Positives = 309/443 (69%), Gaps = 15/443 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLY-TDFKNYDIGDIIGAKGTLF 59
M +R MGK +FI LQD SG +IQLY++ + + + +Y D +D+GDI+G KGTLF
Sbjct: 71 MTRRAMGKATFITLQDMSG-----RIQLYVARDNLPEGVYKEDVGAWDLGDIVGVKGTLF 125
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL++K + ++L+TK+LRPLPNKF L++QE++YR RY+DLI NE++R+ F R+Q
Sbjct: 126 KTKTNELTVKATEVQLLTKALRPLPNKFHGLTDQEVRYRQRYLDLIANEDSRRTFMIRSQ 185
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR + FMEVETP+L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 186 VVAGIREYFISKGFMEVETPMLQVIPGGAAARPFVTHHNALDVDMYLRIAPELYLKRLVV 245
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTM+E+Y AY +Y LM TE++++K+ +D +GTT
Sbjct: 246 GGFERVFELNRNFRNEGVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTT 305
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI--DLQNKLFLKSELKKINPKFNQKKI 297
+ Y DF K FE++T+ +A KY + + DL + K+ K++ + +
Sbjct: 306 IVKYGEYEFDFGKPFERITLHDATIKYGAEKGIVKEDLYDLERAKAAAKRLGIEVQKSWG 365
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L ++ I FEE E L PT++ +P EISPLAR+ N EN +T+RFELFI G
Sbjct: 366 LGSIVNAI-----FEEVAEHHLIQPTFLMAHPAEISPLARR-NDENPEVTDRFELFIGGR 419
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND E+Q+ RF Q+ K E + + + D D++ ALE+G+PP +G G+G+D
Sbjct: 420 EIGNGFSELNDAEDQNERFDAQVAAK-EAGDDEAMFKDEDFVVALEHGLPPTAGEGLGID 478
Query: 418 RLIMLLTNSKNIRDVILFPHLRN 440
RL ML N+ +IRDVILFP +R
Sbjct: 479 RLAMLYANAPSIRDVILFPAMRQ 501
>gi|388257924|ref|ZP_10135102.1| lysyl-tRNA synthetase [Cellvibrio sp. BR]
gi|387938045|gb|EIK44598.1| lysyl-tRNA synthetase [Cellvibrio sp. BR]
Length = 500
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 221/439 (50%), Positives = 301/439 (68%), Gaps = 14/439 (3%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM K F++LQD +G IQLY +++ + + + +DIGDI+G KG L K+
Sbjct: 75 RVMAKRGPFMVLQD-----GDGSIQLY-ADKAAQEVIKDKWGLWDIGDIVGVKGALHKSG 128
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TKSLRPLP+K+ LS+QEI+YR RY+DLI+N R F+ R+Q IS
Sbjct: 129 KGDLYVNLEEYQLLTKSLRPLPDKYHGLSDQEIRYRQRYVDLIVNPEVRDTFRLRSQCIS 188
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
IR++M FMEVETP+LH PGGA AKPFITHHN+L+M+MFLRIAPELYLKRL++GGF
Sbjct: 189 FIRNYMSGCGFMEVETPMLHVIPGGASAKPFITHHNALDMEMFLRIAPELYLKRLVVGGF 248
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
++FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y LM TE +++K+ ++ G T +
Sbjct: 249 ERVFEINRNFRNEGVSTRHNPEFTMMEFYQAYADYKDLMDLTEDLLRKLCIEVTGGTTLK 308
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNNLK 302
YQ DF K F +L++ +++ Y PQ L + + + K L ++
Sbjct: 309 YQTSEYDFGKPFVRLSMFDSVLHYNPQITAEQLSSVEGATKAAEALGLKIKPGTALGKIQ 368
Query: 303 KDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIANG 362
+I FEET E KL PT+IT YP EISPLAR+S+ N +T+RFE FI G E+ANG
Sbjct: 369 TEI-----FEETVEHKLDQPTFITEYPIEISPLARRSD-HNPAVTDRFEFFIGGRELANG 422
Query: 363 FSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLIML 422
FSELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYG+PP +G GIG+DRLIML
Sbjct: 423 FSELNDAEDQAERFMQQVREKDAGDDE-AMHYDADFVRALEYGLPPTAGEGIGIDRLIML 481
Query: 423 LTNSKNIRDVILFPHLRNE 441
N+ +IRDV+LFPH+R E
Sbjct: 482 FANAPSIRDVLLFPHMRPE 500
>gi|431931304|ref|YP_007244350.1| lysyl-tRNA synthetase [Thioflavicoccus mobilis 8321]
gi|431829607|gb|AGA90720.1| lysyl-tRNA synthetase (class II) [Thioflavicoccus mobilis 8321]
Length = 502
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/444 (49%), Positives = 311/444 (70%), Gaps = 15/444 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFK-NYDIGDIIGAKGTLF 59
M +RVMGK SF LQD SG +IQL+I + +G Y +K + D+GDI+GA+GTLF
Sbjct: 69 MSRRVMGKASFSHLQDMSG-----RIQLFIQRDQLGSEPYAAYKRDLDLGDIVGAEGTLF 123
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
+T TGELS++ S++L+TK+LRPLP KF L++ E +YR RY+DLI+N TR+ F+ RT+
Sbjct: 124 RTKTGELSLRCESIRLLTKALRPLPEKFHGLTDLESRYRQRYLDLIVNAETRETFRTRTR 183
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
II +R ++ ++EVETP++H PGGA+A+PF+THHN+L++ ++LRIAPELYLKRL++
Sbjct: 184 IIQYLRDYLNGRGYLEVETPMMHVIPGGAVARPFVTHHNALDIPLYLRIAPELYLKRLVV 243
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GG K++E+N++FRNEG+S RHNPEFTM+EFY AY +Y LM TE +++ + G
Sbjct: 244 GGLEKVYEVNRSFRNEGLSTRHNPEFTMLEFYEAYADYRDLMDLTEDLLRGLAETLCGEA 303
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+++YQG + D + F ++T+ EAI + P DL + + + Q +
Sbjct: 304 RVEYQGAVYDLGRPFRRMTVREAIGHFNPDLTPADL-----VDPARARAAAERRQISVEA 358
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
+ L +FE+T E +L +PT+IT YPTE+SPLAR+ N ++ +T+RFELFI G EI
Sbjct: 359 GWGLGKIMLEIFEKTVEPQLHDPTFITEYPTEVSPLARR-NDDDPFVTDRFELFIGGREI 417
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSS-YYDTDYIHALEYGMPPASGCGIGVDR 418
ANGFSELND E+Q+ RF+ Q K G+L + +YD DY+ ALE+GMPP +G GIGVDR
Sbjct: 418 ANGFSELNDAEDQAERFRRQAAEKE--AGDLEAMHYDADYVRALEHGMPPTAGEGIGVDR 475
Query: 419 LIMLLTNSKNIRDVILFPHLRNEN 442
L+ML T+S +IRDV+LFPH+R E
Sbjct: 476 LVMLFTDSPSIRDVLLFPHMRPEG 499
>gi|320353044|ref|YP_004194383.1| lysyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
gi|320121546|gb|ADW17092.1| lysyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
Length = 495
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 223/444 (50%), Positives = 300/444 (67%), Gaps = 19/444 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M R GK +F LQD S ++Q+Y +++G+ +Y FK +D+GDI+G +G LFK
Sbjct: 65 MSMRKFGKAAFFHLQDASE-----RLQIYARRDLLGEEVYDLFKKWDVGDIVGVEGRLFK 119
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS++ ++L++ITKSLRPLP KF L++ E +YR RY+DLI+N R+VFKKR +I
Sbjct: 120 TKTGELSLEATTLQMITKSLRPLPEKFHGLTDVETRYRQRYLDLIVNPEAREVFKKRVEI 179
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I IR F+ +MEVETP++ PGGA AKPF THHN+L+M ++LRIAPELYLKRL++G
Sbjct: 180 IRLIREFLNNRGYMEVETPMMQPVPGGATAKPFRTHHNALDMDLYLRIAPELYLKRLLVG 239
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY Y LM TE+M+ + + G+
Sbjct: 240 GFEKVFEINRNFRNEGLSTRHNPEFTMLEFYQAYATYHDLMDLTEEMVSWLAHEVTGSMD 299
Query: 241 IDYQGRLLDFSKSFEKLTIIEA---IKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKI 297
I YQG ++ + + +LT+ E+ I P E D K + ++ P K
Sbjct: 300 ISYQGTPVNLAPPWRRLTMEESLVQIGGLDPAVLEDDTAVMALAKQKGIELQPGAGPGKA 359
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
LFE E +L +PT+IT+YPTE+SPLAR+ N E+ +T+RFELFI G
Sbjct: 360 KTE---------LFELLVEERLIDPTFITSYPTEVSPLARR-NEEDPTVTDRFELFITGR 409
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EIAN FSELNDP +Q RF+ QID + E + E+ D DY+ ALEYGMP A+G GIG+D
Sbjct: 410 EIANAFSELNDPIDQLQRFQKQIDERGE-DEEIHPVLDRDYVRALEYGMPSAAGEGIGID 468
Query: 418 RLIMLLTNSKNIRDVILFPHLRNE 441
RL+MLLT+S +IRDVILFP ++ E
Sbjct: 469 RLVMLLTDSPSIRDVILFPQMKPE 492
>gi|323143524|ref|ZP_08078204.1| lysine--tRNA ligase [Succinatimonas hippei YIT 12066]
gi|322416718|gb|EFY07372.1| lysine--tRNA ligase [Succinatimonas hippei YIT 12066]
Length = 508
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 222/445 (49%), Positives = 310/445 (69%), Gaps = 18/445 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R+MGK SF LQD G KIQ+Y++ + + + Y + FK D+GDIIG G F
Sbjct: 73 MTRRIMGKASFATLQDMGG-----KIQIYVTRDALPEGQYQELFKKLDLGDIIGVTGYAF 127
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGEL++ V++L+L+ K+LRPLP K++ L++QE + R RY+DLI NE +R+ F+ RT+
Sbjct: 128 KTKTGELTLHVTALRLLVKALRPLPEKYKGLTDQEARCRQRYLDLIANEESRRTFEIRTK 187
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
I+S IR +M+ + FMEVETP++H PGGA AKPFITHHN+L++ M+LRIAPEL+LKRL++
Sbjct: 188 IVSFIRSYMDSHRFMEVETPMMHVIPGGANAKPFITHHNALDIDMYLRIAPELFLKRLVV 247
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF +++EIN+NFRNEGI RHNPEFTM+EFY AY +Y L+ FTE + +K+ ++ +G T
Sbjct: 248 GGFERVYEINRNFRNEGIDVRHNPEFTMMEFYMAYHDYHDLIDFTEDLFRKMALEVLGDT 307
Query: 240 KIDY-----QGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQ 294
K+ Y +G +DF+K F++LT+ E+I KY DL + K KK++
Sbjct: 308 KVHYGKEGEEGLDIDFAKPFDRLTMKESIVKYGNGITMEDLDDAEKTKELCKKLH----- 362
Query: 295 KKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFI 354
+I+ + + LF+E E L PT+IT+YP EISPLAR+S+ + T+RFE FI
Sbjct: 363 IEIMPSWEHGHFIAALFDELVEEHLQQPTFITSYPAEISPLARRSD-SDPRYTDRFEFFI 421
Query: 355 IGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGI 414
G E+ NGFSELNDP++Q+ RF Q + K + E + YYD DYI AL++G+PP +G GI
Sbjct: 422 GGREMGNGFSELNDPDDQASRFHQQAEAKKHGDDE-AMYYDEDYIVALQHGLPPTAGEGI 480
Query: 415 GVDRLIMLLTNSKNIRDVILFPHLR 439
G+DR +ML TN IRDVILFP LR
Sbjct: 481 GIDRTVMLFTNCHTIRDVILFPTLR 505
>gi|95929407|ref|ZP_01312150.1| lysyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
gi|95134523|gb|EAT16179.1| lysyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
Length = 494
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 220/442 (49%), Positives = 298/442 (67%), Gaps = 13/442 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M +R GK +FI +QD +G ++Q+Y+ IG + F D+GDI+G G F+
Sbjct: 65 MARRDFGKAAFIQVQDRTG-----RLQIYVGKNKIGDEQFAVFGKLDVGDIVGISGKPFR 119
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T T ELS++ SL L+TKSL+PLP K+ L++ E +YR RY+DLI+N VFKKR+QI
Sbjct: 120 TKTDELSLRAESLTLLTKSLQPLPEKWHGLTDVETRYRQRYLDLIVNPEVGDVFKKRSQI 179
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
IS +R FM++ D++EVETP++ GGA AKPF+THHN+L M +FLRIAPELYLKRL++G
Sbjct: 180 ISLMRAFMQERDYLEVETPMMQPVAGGATAKPFVTHHNTLKMDLFLRIAPELYLKRLVVG 239
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEGIS +HNPEFTM+EFY AY Y LM TE+MI I G+
Sbjct: 240 GFERVFEINRNFRNEGISIQHNPEFTMMEFYQAYATYHDLMDMTEEMIGSIAEKVCGSRV 299
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I Y G+ +D + +++LT+ EAI KY E DL++ + I +F
Sbjct: 300 ISYGGKDVDLTAPWDRLTVKEAIVKYGDISLE-DLEDPDKALAYANSIGLEFE-----GT 353
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
+ L LF+E E KLWNPT++T YPTE+SPL+R+ N E + +RFELF++G E+A
Sbjct: 354 IGYGKLLTELFDEVAEPKLWNPTFVTEYPTEVSPLSRR-NDERPEVVDRFELFVVGRELA 412
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
N FSELNDP +Q RF+ Q+ ++ E + + D DYI ALEYG+PP +G GIG+DRL+
Sbjct: 413 NAFSELNDPVDQKGRFEQQL-VEKEAGDDEAHAMDEDYIRALEYGLPPTAGEGIGIDRLV 471
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S +IRDVILFP LR E
Sbjct: 472 MLLTDSASIRDVILFPQLRKET 493
>gi|261492266|ref|ZP_05988829.1| lysine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
BOVINE]
gi|261494487|ref|ZP_05990973.1| lysine--tRNA ligase [Mannheimia haemolytica serotype A2 str. OVINE]
gi|261309871|gb|EEY11088.1| lysine--tRNA ligase [Mannheimia haemolytica serotype A2 str. OVINE]
gi|261312045|gb|EEY13185.1| lysine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
BOVINE]
Length = 500
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 222/447 (49%), Positives = 310/447 (69%), Gaps = 25/447 (5%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
MLKRVMGK SF +QD SG IQLY++ + + ++Y + +D+GDI+G +G LF
Sbjct: 71 MLKRVMGKASFFTIQDVSGA-----IQLYVARDNLSDSVYEEKVSLWDLGDIVGVEGALF 125
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT TGEL+++ S ++L+TKSLRPLP+K L++ E +YR RY+DLI NE +R+ F R+Q
Sbjct: 126 KTKTGELTVRCSEVQLLTKSLRPLPDKHHGLTDLETRYRQRYLDLISNEESRRTFMIRSQ 185
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
++S IR F + DF+EVETP+L PGGA AKPFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 186 VVSGIRKFFLERDFIEVETPMLQVIPGGAAAKPFITHHNALDVDMYLRIAPELYLKRLVV 245
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTMIE+Y AY +Y LM TE++++++ +D +GTT
Sbjct: 246 GGFERVFELNRNFRNEGVSVRHNPEFTMIEYYQAYADYHDLMDNTEELLRQLALDILGTT 305
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKS-ELKK-----INPKFN 293
+ Y + DF K FE++T+ +AI KY DL + F KS E+ K I +
Sbjct: 306 DVPYGDYVFDFGKPFERITMHDAIVKYGNGIQREDLDS--FEKSVEIAKGLGIEIQKSWG 363
Query: 294 QKKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELF 353
++N +FEE E +L PT++ +P EISPLAR+ N EN +T+RFELF
Sbjct: 364 LGSVVN---------AIFEEVAEHQLIQPTFLMAHPAEISPLARR-NDENPEVTDRFELF 413
Query: 354 IIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCG 413
I G EI NGFSELND E+Q+ RF Q+ K+ + E + + D D+I ALE+G+PP +G G
Sbjct: 414 IGGREIGNGFSELNDAEDQAERFDAQVAAKDAGDDE-AMFKDEDFIVALEHGLPPTAGEG 472
Query: 414 IGVDRLIMLLTNSKNIRDVILFPHLRN 440
+G+DRL M+ N+ +IRDVILFP +R
Sbjct: 473 LGIDRLAMIFANAPSIRDVILFPAMRQ 499
>gi|94500762|ref|ZP_01307291.1| lysyl-tRNA synthetase [Bermanella marisrubri]
gi|94427084|gb|EAT12065.1| lysyl-tRNA synthetase [Oceanobacter sp. RED65]
Length = 513
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 229/452 (50%), Positives = 315/452 (69%), Gaps = 23/452 (5%)
Query: 5 VMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTNTG 64
V G+I F T D++G IQ Y+ ++ + Y +D+GDI+GA+G L K+ G
Sbjct: 65 VAGRIMFQRGPFTKINDASGGIQFYVPKDVQKEINYK--SKFDLGDIVGARGALHKSGKG 122
Query: 65 ELSIKVSS---LKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQII 121
EL + V++ L ++TKSLRPLP+KF L++QEIKYR RY+DLIIN+ TR +F R++II
Sbjct: 123 ELYVNVATADDLIMLTKSLRPLPDKFHGLADQEIKYRQRYVDLIINQETRDLFMVRSKII 182
Query: 122 SSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGG 181
++R ++ +FMEVETP+L PGGA AKPF THHN+L + M+LRIAPELYLKRL++GG
Sbjct: 183 EAMRKYLSDRNFMEVETPMLQAIPGGATAKPFETHHNALGIDMYLRIAPELYLKRLLVGG 242
Query: 182 FNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKI 241
F ++FEIN+NFRNEG+S RHNPEFTMIEFY AY Y LM TE M++ I D +GTT I
Sbjct: 243 FERVFEINRNFRNEGLSTRHNPEFTMIEFYQAYATYHDLMDTTEDMLRNIAQDVLGTTDI 302
Query: 242 -----DYQGRLL-----DFSKSFEKLTIIEAIKKYTPQYNEI---DLQNKLF-LKSELKK 287
D +G ++ DF+K F +LT++EA+ KY P ++E D +N L L + ++
Sbjct: 303 VSTEKDAEGNVVNETVYDFAKPFARLTMMEAVLKYNPDFDEAVINDPENNLDKLIAYGRQ 362
Query: 288 INPKFNQKKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNIT 347
+ + + K+ K + + +FEET E KL PT+IT YP E+SPLAR+ N EN IT
Sbjct: 363 VGIREDAKQSAWGAGKWLCE--IFEETAEHKLDQPTFITAYPWEVSPLARR-NDENPFIT 419
Query: 348 ERFELFIIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMP 407
+RFE F+ G E+ANGFSELND E+Q+ RF+ Q++ K+ + E + +YD DY+ ALEYGMP
Sbjct: 420 DRFEFFVGGRELANGFSELNDAEDQAERFRKQVEEKDAGDDE-AMHYDADYVQALEYGMP 478
Query: 408 PASGCGIGVDRLIMLLTNSKNIRDVILFPHLR 439
PA+G GIG+DRL+ML T+S I+DVILFPH+R
Sbjct: 479 PAAGEGIGIDRLVMLFTDSPTIKDVILFPHMR 510
>gi|119776009|ref|YP_928749.1| lysyl-tRNA synthetase [Shewanella amazonensis SB2B]
gi|166229824|sp|A1S9M3.1|SYK_SHEAM RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|119768509|gb|ABM01080.1| lysyl-tRNA synthetase [Shewanella amazonensis SB2B]
Length = 500
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/443 (49%), Positives = 313/443 (70%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM K F++LQD SG +IQ Y +++ + +L + DIGDIIG +GTL +
Sbjct: 68 RVMAKRGPFLVLQDVSG-----RIQAY-ADKGVQADLKDRYAGLDIGDIIGVEGTLHLSG 121
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE +YR RY+DLI+NE++R+ FK R+++++
Sbjct: 122 KGDLYVNMERYELLTKALRPLPEKFHGLTDQETRYRQRYVDLIVNEDSREAFKMRSKVVA 181
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM K +FMEVETP++H PGGA A+PF+THHN+L+++M+LRIAPELYLKRL++GGF
Sbjct: 182 AIRNFMIKKEFMEVETPMMHVIPGGASARPFVTHHNALDIEMYLRIAPELYLKRLVVGGF 241
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
++FEIN+NFRNEG+SPRHNPEFTM+EFY AY +Y L+ TE+M+ I + +G TK+
Sbjct: 242 ERVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLIDLTEEMLSSIAKELLGDTKLP 301
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y ++DF + +++++EAIK Y P I +++N F++ K + +
Sbjct: 302 YGEHVIDFGGPYTRMSMLEAIKHYNPDNATIQAMTYEEVKNIDFMRKLAKDVGIETETFW 361
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E KL PT+IT YP +ISPLAR+S+ N+ IT+RFE FI G
Sbjct: 362 SCGQLLEEI-----FGETAEPKLMQPTFITGYPADISPLARRSD-GNDFITDRFEFFIGG 415
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND E+Q RFK Q++ K+ + E + +YD D+I ALE+G+PP +G GIG+
Sbjct: 416 REVANGFSELNDAEDQDNRFKAQVEAKDAGDDE-AMFYDADFITALEHGLPPTAGQGIGI 474
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL+ML TN+ IRDVILFP +R
Sbjct: 475 DRLVMLFTNTHTIRDVILFPAMR 497
>gi|335424933|ref|ZP_08553926.1| lysyl-tRNA synthetase [Salinisphaera shabanensis E1L3A]
gi|334887064|gb|EGM25403.1| lysyl-tRNA synthetase [Salinisphaera shabanensis E1L3A]
Length = 501
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 210/443 (47%), Positives = 298/443 (67%), Gaps = 20/443 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
+ KRVMGK+SF LQD SG +IQL++ +++G++ Y FK DIGDI+G +G L +
Sbjct: 71 LAKRVMGKLSFATLQDRSG-----RIQLFVQRDLLGEDAYKAFKQLDIGDIVGVRGALSR 125
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++ + L+L+TKSLRPLP K+ LS+ E +YR RY+DLI++ ++R VF R+ I
Sbjct: 126 TNKGELSVRATELRLLTKSLRPLPEKWHGLSDTEARYRQRYVDLIMHPDSRAVFMARSAI 185
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+ +R F E DF+EVETP+L PGGA A+PF+TH+N+L+ +LR+APELYLKRL++G
Sbjct: 186 VRGVRDFFESRDFLEVETPMLQAIPGGAAARPFVTHYNALDHDFYLRVAPELYLKRLVVG 245
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G K+FE+N+NFRNEG+S RHNPEFTM+EFY AY +Y LM E +++++
Sbjct: 246 GLEKVFELNRNFRNEGVSTRHNPEFTMLEFYQAYADYRDLMDSIEALLRELSDRVAANHS 305
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPK----FNQKK 296
+ F FE+L++ +A+ KY ++ D+++ L ++ K + K
Sbjct: 306 QACNEDAIRFDAPFERLSMRDAVLKYNDSVSQQDIESLDGLSEAAARLGVKGEASWGYGK 365
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L LFE T E +L +PT++T+YP E+SPLAR+ + +N ++TERFELF+ G
Sbjct: 366 WLTE---------LFEHTVEHRLESPTFVTDYPAEVSPLARRRD-DNPDVTERFELFVAG 415
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
EIANGFSELND E+Q+ RF Q + E + YYD DY++ALEYG+PP +G GIG+
Sbjct: 416 REIANGFSELNDAEDQAERFAAQAHAMAAGDDE-AMYYDADYVNALEYGLPPTAGAGIGI 474
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL+MLLT IRDV+LFP LR
Sbjct: 475 DRLVMLLTGRSAIRDVLLFPQLR 497
>gi|94676799|ref|YP_588620.1| lysyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
gi|123384151|sp|Q1LTU4.1|SYK_BAUCH RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|94219949|gb|ABF14108.1| lysyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
Length = 506
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 233/438 (53%), Positives = 309/438 (70%), Gaps = 13/438 (2%)
Query: 3 KRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLFKT 61
+R+MGK SF++LQD S G IQLY+S++ + + Y + FK +D+GDI+G G LFKT
Sbjct: 78 RRIMGKASFVILQD-----SGGTIQLYLSSKNLSDSFYNEHFKKWDLGDILGVHGRLFKT 132
Query: 62 NTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQII 121
TGEL+I + + L+TK+LRP+PNKF + +++I+YR RY+DLI N+N+ +FK R+QII
Sbjct: 133 KTGELTINCNEIILLTKALRPIPNKFHGIVDKQIRYRQRYLDLITNKNSFNLFKTRSQII 192
Query: 122 SSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGG 181
+ IR F+ K DF+EVETPIL + PGGA A+PFIT+HN+L+M ++LRIAPELYLK+LIIGG
Sbjct: 193 TEIRQFLNKEDFIEVETPILQSLPGGATARPFITYHNALDMNLYLRIAPELYLKQLIIGG 252
Query: 182 FNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKI 241
F KIFEIN+NFRNEG+S HNPEFTM+E Y AY +Y +M T+ ++ I +GT I
Sbjct: 253 FEKIFEINRNFRNEGLSAHHNPEFTMMELYIAYADYHDVMLLTQNLLNTITNHVLGTNII 312
Query: 242 DYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNNL 301
Y LDFSK+F K+T+ EAI Y Q L +K+ + K I +QK L +
Sbjct: 313 QYGNLKLDFSKNFVKMTMKEAICHYNKQILSKHLDDKMQAITCAKNIGIHIDQKWGLGRI 372
Query: 302 KKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIAN 361
+ +I FE+TTE L PT+IT+YP E+SPLAR+ N N +RFELFI G EI N
Sbjct: 373 QTEI-----FEKTTEKHLLQPTFITSYPIEVSPLARR-NDNNPFFADRFELFIGGYEIGN 426
Query: 362 GFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLIM 421
GFSELND E+Q+ R Q +KN + E S +YD DYI ALE+G+PP +G GIG+DRL+M
Sbjct: 427 GFSELNDYEDQANRLIEQATIKNSGDNE-SMFYDEDYIIALEHGLPPTAGLGIGIDRLVM 485
Query: 422 LLTNSKNIRDVILFPHLR 439
LLTNS IRDVILFP +R
Sbjct: 486 LLTNSHFIRDVILFPTMR 503
>gi|189423826|ref|YP_001951003.1| lysyl-tRNA synthetase [Geobacter lovleyi SZ]
gi|189420085|gb|ACD94483.1| lysyl-tRNA synthetase [Geobacter lovleyi SZ]
Length = 492
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 215/439 (48%), Positives = 303/439 (69%), Gaps = 13/439 (2%)
Query: 3 KRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
+R GK +F+ LQD G+IQ+Y+ + +G+ ++ F+++DIGDIIG G F+T
Sbjct: 65 RRSFGKAAFMQLQD-----RKGRIQVYVRKDDLGEEVFAQFESFDIGDIIGIVGFPFRTK 119
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
TGELS+ S++L+ KSL PLP KF L++ E +YR RY+DLI+N R++F KR++I++
Sbjct: 120 TGELSVHARSIRLLVKSLLPLPEKFHGLTDVETRYRQRYVDLIVNPEVRELFIKRSRIVN 179
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
IR FM DF+EVETP++H PGGA A+PF+THHN+L+M+++LRIAPELYLKRL++GGF
Sbjct: 180 LIRSFMTSRDFLEVETPMMHQIPGGATARPFVTHHNALDMELYLRIAPELYLKRLVVGGF 239
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
++FEIN+NFRNEGIS RHNPEFTM+EFY AY + LM FTE++ + +GT
Sbjct: 240 ERVFEINRNFRNEGISVRHNPEFTMMEFYQAYATFEDLMDFTEELFCHVAEQVLGTLGFS 299
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNNLK 302
YQG + F + + +LT+ EAI +Y D+ K +L + + +++
Sbjct: 300 YQGLAISFQRPWRRLTVKEAILEYG------DIDAKKLDDRDLALAYARSIGLDLPDDIS 353
Query: 303 KDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIANG 362
L + +FEE E KL PT++T YPTE+SPL+RK+++ + I +RFEL I G EIAN
Sbjct: 354 YGKLVMEIFEEVAEHKLIQPTFVTAYPTEVSPLSRKNDL-DPYIVDRFELMIGGREIANA 412
Query: 363 FSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLIML 422
FSELNDP +Q RF Q+ K++ + E + Y D DY+ ALEYG+PP +G GIG+DRL+ML
Sbjct: 413 FSELNDPVDQKERFLAQVAEKDKGDEE-AHYMDEDYVRALEYGLPPTAGEGIGIDRLVML 471
Query: 423 LTNSKNIRDVILFPHLRNE 441
LT+S +IRDVILFP LR E
Sbjct: 472 LTDSASIRDVILFPQLRKE 490
>gi|400406300|ref|YP_006589048.1| lysyl-tRNA synthetase (class II) [secondary endosymbiont of
Heteropsylla cubana]
gi|400364553|gb|AFP85620.1| lysyl-tRNA synthetase (class II) [secondary endosymbiont of
Heteropsylla cubana]
Length = 506
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 227/438 (51%), Positives = 303/438 (69%), Gaps = 13/438 (2%)
Query: 3 KRVMGKISFIMLQDTSGPDSNGKIQLYI-SNEIIGKNLYTDFKNYDIGDIIGAKGTLFKT 61
+R+MGK SF LQ+ SG KIQ+Y+ N+++ FK +D+GDIIG GTLFKT
Sbjct: 78 RRIMGKASFATLQNFSG-----KIQIYVVCNKLLEGEYNEKFKKWDLGDIIGVYGTLFKT 132
Query: 62 NTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQII 121
GELS+ S + LI+K++RP+P+KF L++QE++YR RY+DLI+N TR+ FK R +I
Sbjct: 133 KKGELSVYCSKIYLISKAMRPIPSKFYGLTDQELRYRQRYLDLIVNNKTRQTFKIRFNLI 192
Query: 122 SSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGG 181
S IR FM +DF+EVETP++ + PGGA A+PFITHHN+L++ M+LRI+PELYLKRL++GG
Sbjct: 193 SEIRRFMMDHDFIEVETPMMQSIPGGATARPFITHHNALHVDMYLRISPELYLKRLMVGG 252
Query: 182 FNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKI 241
F +IFEIN+NFRNEG+S HNPEFTM+E Y AY +YI LM E +++K+ +GT +
Sbjct: 253 FERIFEINRNFRNEGLSSYHNPEFTMLELYMAYADYIDLMVLVENLMRKLTQQVLGTNIV 312
Query: 242 DYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNNL 301
Y + DFSKSF +T+ EAI + P L + + K + + + L +
Sbjct: 313 QYGDQTFDFSKSFITMTMTEAIYHHHPHIKSETLNDITAATAIAKSLGVLVDSRWGLGRV 372
Query: 302 KKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIAN 361
+I FEETTE+ L PT+IT+YP E+SPLAR+ N + T+RFELFI G EI N
Sbjct: 373 LTEI-----FEETTESHLIQPTFITHYPVEVSPLARR-NDTDPLYTDRFELFIGGREIGN 426
Query: 362 GFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLIM 421
GFSELNDPE+Q+ RF Q KN E + +YD DY+ ALE GMPP +G GIG+DRL+M
Sbjct: 427 GFSELNDPEDQASRFIQQAQNKNVAKHE-TMFYDEDYVTALENGMPPTAGLGIGIDRLVM 485
Query: 422 LLTNSKNIRDVILFPHLR 439
LLTN+K IRDVILFP LR
Sbjct: 486 LLTNNKTIRDVILFPMLR 503
>gi|374336896|ref|YP_005093583.1| lysyl-tRNA synthetase [Oceanimonas sp. GK1]
gi|372986583|gb|AEY02833.1| lysyl-tRNA synthetase [Oceanimonas sp. GK1]
Length = 495
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/441 (49%), Positives = 307/441 (69%), Gaps = 22/441 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
R+M K F+ LQD SG +IQ Y + E + + DIGDIIG GTL K+
Sbjct: 69 RIMAKRGPFLALQDMSG-----RIQAYATKEAQA-FIKEQYNGLDIGDIIGVTGTLHKSG 122
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + S +L+TK+LRPLP KF LS+QE +YR RY+DLI NE +R+ F R+++++
Sbjct: 123 KGDLYVNMDSFQLLTKALRPLPEKFHGLSDQETRYRQRYLDLITNEESRQTFMVRSKVMA 182
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR FM ++ FMEVETP++ PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++GGF
Sbjct: 183 AIRSFMNRHGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVVGGF 242
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
K+FEIN+NFRNEG+SPRHNPEFTM+EFY AY +Y LM FTE+M++ + + +G+ ++
Sbjct: 243 EKVFEINRNFRNEGLSPRHNPEFTMMEFYWAYADYRDLMDFTEEMLRTVTTEVLGSAEVK 302
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDL---QNKLFLKSELK-KINPKFNQKKIL 298
Y DF K F +L++ +AI KY P+ L ++ + +LK K+ + +++
Sbjct: 303 YGEETFDFGKPFARLSMKDAILKYNPEVTLDQLATYESACEVAKDLKIKVEKSWGLGRVI 362
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
+FEET E +L PT+IT YP E+SPLAR+ N + +IT+RFE FI G E
Sbjct: 363 TE---------IFEETAEHRLIQPTFITEYPAEVSPLARR-NDNDPSITDRFEFFIGGRE 412
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
IANGFSELND E+Q+ RF++Q++ K+ + E + +YD DY+ +LE+G+PP +G GIG+DR
Sbjct: 413 IANGFSELNDAEDQAQRFRDQVEQKDAGDDE-AMFYDEDYVTSLEHGLPPTAGQGIGIDR 471
Query: 419 LIMLLTNSKNIRDVILFPHLR 439
L+MLLT+S IRDVILFP LR
Sbjct: 472 LVMLLTDSHTIRDVILFPTLR 492
>gi|422336451|ref|ZP_16417424.1| lysyl-tRNA synthetase [Aggregatibacter aphrophilus F0387]
gi|353346637|gb|EHB90922.1| lysyl-tRNA synthetase [Aggregatibacter aphrophilus F0387]
Length = 502
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 215/443 (48%), Positives = 309/443 (69%), Gaps = 15/443 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLY-TDFKNYDIGDIIGAKGTLF 59
M +R MGK +FI LQD SG +IQLY++ + + + +Y D +D+GDI+G KGTLF
Sbjct: 71 MTRRAMGKATFITLQDMSG-----RIQLYVARDNLPEGVYKEDVGAWDLGDIVGVKGTLF 125
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL++K + ++L+TK+LRPLP+KF L++QE++YR RY+DLI NE++R+ F R+Q
Sbjct: 126 KTKTNELTVKATEVQLLTKALRPLPDKFHGLTDQEVRYRQRYLDLIANEDSRRTFMIRSQ 185
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR + FMEVETP+L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 186 VVAGIREYFISKGFMEVETPMLQVIPGGAAARPFVTHHNALDVDMYLRIAPELYLKRLVV 245
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTM+E+Y AY +Y LM TE++++K+ +D +GTT
Sbjct: 246 GGFERVFELNRNFRNEGVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTT 305
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI--DLQNKLFLKSELKKINPKFNQKKI 297
+ Y DF K FE++T+ +A KY + + DL + K+ K++ + +
Sbjct: 306 IVKYGEYEFDFGKPFERITLHDATIKYGAEKGIVKEDLYDLERAKAAAKRLGIEVQKSWG 365
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L ++ I FEE E L PT++ +P EISPLAR+ N EN +T+RFELFI G
Sbjct: 366 LGSIVNAI-----FEEVAEHHLIQPTFLMAHPAEISPLARR-NDENPEVTDRFELFIGGR 419
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND E+Q+ RF Q+ K E + + + D D++ ALE+G+PP +G G+G+D
Sbjct: 420 EIGNGFSELNDAEDQNERFDAQVAAK-EAGDDEAMFKDEDFVVALEHGLPPTAGEGLGID 478
Query: 418 RLIMLLTNSKNIRDVILFPHLRN 440
RL ML N+ +IRDVILFP +R
Sbjct: 479 RLAMLYANAPSIRDVILFPAMRQ 501
>gi|157960585|ref|YP_001500619.1| lysyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
gi|189082970|sp|A8H0J7.1|SYK_SHEPA RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|157845585|gb|ABV86084.1| lysyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
Length = 501
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/443 (49%), Positives = 308/443 (69%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM K F+++QD SG +IQ Y ++ K+L F DIGDIIG G L +
Sbjct: 68 RVMAKRGPFLVIQDVSG-----RIQAYAGKDV-QKDLKEKFLGLDIGDIIGVTGQLHLSG 121
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE +YR RY+DLI+NE++R+ F R++++S
Sbjct: 122 KGDLYVNMEEYQLLTKALRPLPEKFHGLTDQETRYRQRYVDLIVNEDSREAFIMRSKVVS 181
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM K +FMEVETP++H+ PGGA A+PF THHN+L++ M+LRIAPELYLKRL++GGF
Sbjct: 182 AIRNFMVKKEFMEVETPMMHSIPGGASARPFETHHNALDIAMYLRIAPELYLKRLVVGGF 241
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
++FEIN+NFRNEG+SPRHNPEFTM+EFY AY ++ LM TE+M+ I + G+ ++
Sbjct: 242 ERVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADFNDLMDLTEEMLSSIATELCGSPQLP 301
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y +DF + +L++++AIKKY P I ++++ F++ K + +
Sbjct: 302 YGEHTVDFGGPYARLSMLDAIKKYNPDNATIQSMTYEEVKDVEFMRDLAKSLGMTVEKFW 361
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET ET+L PT+IT YP +ISPLAR+ N +N+ IT+RFE FI G
Sbjct: 362 TCGQLLEEI-----FGETAETQLMQPTFITGYPADISPLARR-NDDNHFITDRFEFFIGG 415
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND E+Q RFK Q+D K+ + E + +YD DYI ALE+G+PP +G GIG+
Sbjct: 416 REVANGFSELNDAEDQDSRFKAQVDAKDAGDDE-AMFYDADYITALEHGLPPTAGQGIGI 474
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL+ML TN+ IRDVILFP +R
Sbjct: 475 DRLVMLFTNTHTIRDVILFPAMR 497
>gi|170725302|ref|YP_001759328.1| lysyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
gi|238688658|sp|B1KFR7.1|SYK_SHEWM RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|169810649|gb|ACA85233.1| lysyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
Length = 501
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 217/443 (48%), Positives = 308/443 (69%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
R+M K F+++QD SG +IQ Y ++ K+L F+ DIGDIIG G L +
Sbjct: 69 RIMAKRGPFLVIQDVSG-----RIQAYAGKDV-QKDLKATFQGLDIGDIIGVTGQLHLSG 122
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE +YR RY+DLI+NE++R F R++++S
Sbjct: 123 KGDLYVNMEEYQLLTKALRPLPEKFHGLTDQETRYRQRYVDLIVNEDSRNAFIMRSKVVS 182
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM K +FMEVETP++H+ PGGA A+PF THHN+L++ M+LRIAPELYLKRL++GGF
Sbjct: 183 AIRNFMVKKEFMEVETPMMHSIPGGASARPFETHHNALDIAMYLRIAPELYLKRLVVGGF 242
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
++FEIN+NFRNEG+SPRHNPEFTM+EFY AY ++ LM TE+M+ I + G+ ++
Sbjct: 243 ERVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADFNDLMDLTEEMLSSIATELCGSPQLP 302
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y +DF + +L++++AIKKY P I ++++ F++ K + +
Sbjct: 303 YGEHTVDFGGPYARLSMLDAIKKYNPDNATIQSMTYEEVKDVEFMRDLAKSLGMTIEKFW 362
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET ET+L PT+IT YP +ISPLAR+ N +N+ IT+RFE FI G
Sbjct: 363 TCGQLLEEI-----FGETAETQLMQPTFITGYPADISPLARR-NDDNHFITDRFEFFIGG 416
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND E+Q RFK Q+D K+ + E + +YD DYI ALE+G+PP +G GIG+
Sbjct: 417 REVANGFSELNDAEDQDNRFKAQVDAKDAGDDE-AMFYDADYITALEHGLPPTAGQGIGI 475
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL+ML TN+ IRDVILFP +R
Sbjct: 476 DRLVMLFTNTHTIRDVILFPAMR 498
>gi|392959780|ref|ZP_10325259.1| Lysyl-tRNA synthetase [Pelosinus fermentans DSM 17108]
gi|421053421|ref|ZP_15516398.1| lysyl-tRNA synthetase [Pelosinus fermentans B4]
gi|421058052|ref|ZP_15520789.1| Lysyl-tRNA synthetase [Pelosinus fermentans B3]
gi|421064723|ref|ZP_15526569.1| Lysyl-tRNA synthetase [Pelosinus fermentans A12]
gi|421071220|ref|ZP_15532342.1| Lysyl-tRNA synthetase [Pelosinus fermentans A11]
gi|392442022|gb|EIW19631.1| lysyl-tRNA synthetase [Pelosinus fermentans B4]
gi|392447379|gb|EIW24626.1| Lysyl-tRNA synthetase [Pelosinus fermentans A11]
gi|392455931|gb|EIW32698.1| Lysyl-tRNA synthetase [Pelosinus fermentans DSM 17108]
gi|392460497|gb|EIW36791.1| Lysyl-tRNA synthetase [Pelosinus fermentans A12]
gi|392461593|gb|EIW37770.1| Lysyl-tRNA synthetase [Pelosinus fermentans B3]
Length = 497
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/448 (48%), Positives = 305/448 (68%), Gaps = 29/448 (6%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M R GK SF+ L D SG K+Q Y +++G+ Y FK DIGDIIG +G +FK
Sbjct: 69 MAVRGHGKTSFVHLMDMSG-----KVQAYFRQDVVGEAEYDKFKLLDIGDIIGIEGVIFK 123
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T GE+S+K +S +++ KSLRPLP K+ L + E +YR RY+DLI+N R F R++I
Sbjct: 124 TQRGEISLKATSFEILAKSLRPLPEKWHGLKDVETRYRQRYLDLIVNPEVRNTFVTRSKI 183
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I S+R ++K D++EVETP++H GGA A+PF+THHN+L+M +FLRIAPELYLKRLI+G
Sbjct: 184 IKSLRSILDKRDYLEVETPMMHPIAGGAAARPFVTHHNALDMDLFLRIAPELYLKRLIVG 243
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF +++E+ + FRNEGIS RHNPEFT++E Y AY++Y LM+ TE ++ I ++ +GTT+
Sbjct: 244 GFERVYEVGRVFRNEGISVRHNPEFTIVELYQAYSDYQDLMRLTEDVVSGIALEVLGTTQ 303
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQK----- 295
I YQG+ +D + + +LT+ EA+KKYT ++D L+ E + I K K
Sbjct: 304 ITYQGQEIDLAPPWNRLTMTEAVKKYT----DVDFDTVATLE-EARAIAAKLGVKYENKN 358
Query: 296 ---KILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFEL 352
ILNN +FEE E L PT+I +PTEISPLA++ N EN IT+RFE+
Sbjct: 359 GIGGILNN---------VFEEKVEEHLIQPTFIIGHPTEISPLAKR-NKENPEITDRFEV 408
Query: 353 FIIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGC 412
F+ E+ANGFSELNDP +Q RF +Q++ + + E + D DY++ALEYG+PP G
Sbjct: 409 FVFARELANGFSELNDPIDQEGRFASQVEQRESGDDE-AHMMDHDYVNALEYGLPPTGGL 467
Query: 413 GIGVDRLIMLLTNSKNIRDVILFPHLRN 440
GIG+DRL+MLLT+S +IRDV+LFPH+R+
Sbjct: 468 GIGIDRLVMLLTDSPSIRDVLLFPHMRH 495
>gi|119505212|ref|ZP_01627287.1| Protein-L-isoaspartate(D-aspartate) O-methyltransferase [marine
gamma proteobacterium HTCC2080]
gi|119458903|gb|EAW40003.1| Protein-L-isoaspartate(D-aspartate) O-methyltransferase [marine
gamma proteobacterium HTCC2080]
Length = 503
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 213/437 (48%), Positives = 306/437 (70%), Gaps = 20/437 (4%)
Query: 10 SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTNTGELSIK 69
+F+++QD + IQLYI+ +++ K +D+GDI+ A G + ++ G+L I
Sbjct: 83 AFLLIQDGTS-----TIQLYINRKVLDATTLEAIKTWDLGDIVAASGPINRSGKGDLYIN 137
Query: 70 VSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIISSIRHFME 129
+ S +L+TK+LRPLP+K+ LS+QE++YR RY+DLI+N ++R VF+ R+ +S IR F++
Sbjct: 138 MESARLLTKALRPLPDKYHGLSDQEMRYRQRYVDLIVNPDSRAVFRMRSAAVSFIRRFLD 197
Query: 130 KNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGFNKIFEIN 189
FMEVETP+LH PGGA AKPF THHN+L+M M+LRIAPELYLKRL +GGF K++EIN
Sbjct: 198 DRGFMEVETPMLHPIPGGAAAKPFETHHNALDMPMYLRIAPELYLKRLTVGGFEKVYEIN 257
Query: 190 KNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKIDYQGRLLD 249
+NFRNEG+S RHNPEFTM+EFY AY +Y M TE +++++ + +GT + Y LD
Sbjct: 258 RNFRNEGLSTRHNPEFTMLEFYWAYADYNDAMDLTEALLRELTQNLLGTMTVPYGELQLD 317
Query: 250 FSKSFEKLTIIEAIKKYTPQYNEIDLQNK---LFLKSELK-KINPKFNQKKILNNLKKDI 305
FS+ F +L++++AI KY P + ++ + EL ++ P + KI
Sbjct: 318 FSQPFARLSVLDAIYKYNPDITPEQIASREAAAAVAHELGIEVKPSWGLGKI-------- 369
Query: 306 LQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIANGFSE 365
Q+ +FE T E +L PT+IT YPTE+SPLAR+ N +N IT+RFE F+ G EIANGFSE
Sbjct: 370 -QIEIFEATAEHRLEQPTFITAYPTEVSPLARR-NDDNPFITDRFEFFVGGREIANGFSE 427
Query: 366 LNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLIMLLTN 425
LNDPE+Q+ RF+ Q K+ + E + ++D DY+ ALEYGMPP +G GIG+DRL+MLLT+
Sbjct: 428 LNDPEDQAERFRAQAAEKDSGDEE-AMHFDHDYVRALEYGMPPTAGEGIGIDRLVMLLTD 486
Query: 426 SKNIRDVILFPHLRNEN 442
+ +IRDV+LFPH+R E+
Sbjct: 487 AASIRDVLLFPHMRPED 503
>gi|71892044|ref|YP_277774.1| lysyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus str.
BPEN]
gi|123734157|sp|Q493E1.1|SYK_BLOPB RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|71796150|gb|AAZ40901.1| lysyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus str.
BPEN]
Length = 509
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 230/440 (52%), Positives = 301/440 (68%), Gaps = 14/440 (3%)
Query: 3 KRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLFKT 61
+R+MGK SFI ++D + G IQLYI++ + NLY + K +D+GDI+GA+G LF+T
Sbjct: 79 QRIMGKASFITIRD-----AEGCIQLYITSNSLATNLYDENIKQWDLGDILGARGILFRT 133
Query: 62 NTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQII 121
TGELSI ++L+TKSLRPLP+KF L+NQE KYR RY+DLIINENTRK FK R+ +I
Sbjct: 134 RTGELSIYCKEIRLLTKSLRPLPDKFHGLNNQETKYRQRYLDLIINENTRKTFKIRSLVI 193
Query: 122 SSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGG 181
S IR FM+KN+FMEVETP++H GGAIA PFITHHN L + M+LRIAPELYLK+L+IGG
Sbjct: 194 SEIRQFMKKNNFMEVETPMMHTIAGGAIAHPFITHHNKLGIDMYLRIAPELYLKKLVIGG 253
Query: 182 FNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKI 241
F +IFEIN++FRNEGIS HNPEFTM+E Y AY +Y ++ + +++ + +G+ I
Sbjct: 254 FERIFEINRSFRNEGISSYHNPEFTMMEIYMAYADYRDIIILVQNLLRSVTQKILGSNII 313
Query: 242 DYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNNL 301
+Y LDF F +++I EAI Y P+ ++ + S K + K L+
Sbjct: 314 NYGDYELDFKHPFTQISIKEAILYYLPETRSQNIDDICTAVSIAKSLGIKVKSCWTLHR- 372
Query: 302 KKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIAN 361
+ +++FEE E K+ PT +T+YP EISPLAR+ N N +RFELFI G EI N
Sbjct: 373 ----IHMVIFEEVIEKKIIQPTCVTSYPIEISPLARR-NDNNPEFADRFELFIAGREIGN 427
Query: 362 GFSELNDPEEQSVRFKNQI--DLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
GFSELNDPE+Q RF Q N + +YD DY+ ALEYG+PP +G GIG+DRL
Sbjct: 428 GFSELNDPEDQKERFLKQAYGKKNKINNNNVHIHYDEDYLIALEYGLPPTAGIGIGIDRL 487
Query: 420 IMLLTNSKNIRDVILFPHLR 439
IMLLT+S IRDVILFP LR
Sbjct: 488 IMLLTDSHTIRDVILFPTLR 507
>gi|254480185|ref|ZP_05093433.1| lysyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
gi|214039747|gb|EEB80406.1| lysyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
Length = 497
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 211/432 (48%), Positives = 306/432 (70%), Gaps = 12/432 (2%)
Query: 10 SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTNTGELSIK 69
SF+++QD S +IQLY++ + + + + K++D+GDI+ A G L K+ G+L I
Sbjct: 78 SFLLIQDGSD-----QIQLYVNRKGLDEETLAEIKSWDLGDIVAASGPLHKSGKGDLYIN 132
Query: 70 VSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIISSIRHFME 129
+ +L+TK+LRPLP+K+ LS+QE++YR RY+DLI+NE +RKVF+ R++II+ IR +M
Sbjct: 133 MEQARLLTKALRPLPDKYHGLSDQEMRYRQRYVDLIVNEESRKVFRTRSRIIAFIRDYMM 192
Query: 130 KNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGFNKIFEIN 189
+ FMEVETP++ PGGA AKPF+THHN+L+ M+LRIAPELYLKRL +GGF ++FEIN
Sbjct: 193 ERGFMEVETPMMQVIPGGAAAKPFVTHHNALDQDMYLRIAPELYLKRLTVGGFERVFEIN 252
Query: 190 KNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKIDYQGRLLD 249
++FRNEG+S RHNPEFTM+E+Y AY + M TE M++K+ + IG+T ++YQG D
Sbjct: 253 RSFRNEGLSTRHNPEFTMLEYYWAYGAFEDAMDLTEDMLRKLTQEVIGSTTVEYQGGSYD 312
Query: 250 FSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNNLKKDILQLM 309
FS+ F +L++ +AI +Y + DL ++ + K + + L +Q+
Sbjct: 313 FSQPFVRLSVFDAILQYNADISAEDLADEGKARDIAKGLGIALKESWGLGK-----VQIE 367
Query: 310 LFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIANGFSELNDP 369
+FE+T E L PT+IT YPTE+SPL+R+ N ++ +T+RFE FI G E+ANGFSELNDP
Sbjct: 368 IFEKTVEHLLDQPTFITRYPTEVSPLSRR-NDDDPFVTDRFEFFIGGRELANGFSELNDP 426
Query: 370 EEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLIMLLTNSKNI 429
E+Q+ RF Q+ K+ + E + +YD DYI ALEYG+PP G GIG+DRL+M LT+S +I
Sbjct: 427 EDQAERFLAQVAEKDAGDDE-AMHYDADYIRALEYGLPPTVGEGIGIDRLVMFLTDSASI 485
Query: 430 RDVILFPHLRNE 441
RDV+LFPH+R E
Sbjct: 486 RDVLLFPHMRPE 497
>gi|152979179|ref|YP_001344808.1| lysyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
gi|229559853|sp|A6VPH6.1|SYK_ACTSZ RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|150840902|gb|ABR74873.1| lysyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
Length = 503
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 217/443 (48%), Positives = 311/443 (70%), Gaps = 15/443 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYT-DFKNYDIGDIIGAKGTLF 59
M +R MGK +FI +QD SG KIQLY++ + + + +Y D K++D+GDI+G KGTLF
Sbjct: 71 MTRRAMGKATFITIQDMSG-----KIQLYVACDNLPEGVYAEDVKSWDLGDIVGIKGTLF 125
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL++K ++L+TK+LRPLP+KF LS+QE +YR RY+DLI NE +R+ F R++
Sbjct: 126 KTKTNELTVKAHEVQLLTKALRPLPDKFHGLSDQETRYRQRYLDLISNEESRRTFVIRSK 185
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+I+ IR + F+EVETP+L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 186 VIAGIREYFIGKGFIEVETPMLQVIPGGAAARPFVTHHNALDIDMYLRIAPELYLKRLVV 245
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTMIE+Y AY +Y LM TE++++K+ +D +GTT
Sbjct: 246 GGFERVFELNRNFRNEGVSVRHNPEFTMIEYYQAYADYHDLMDNTEELLRKLALDILGTT 305
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI--DLQNKLFLKSELKKINPKFNQKKI 297
+ Y DF K FE++T+ +A+ KY + + DL + K+ K+ + +
Sbjct: 306 IVPYGEYEFDFGKPFERITMHDAVLKYGAEKGIVKEDLYDLERAKAAATKLGIEIQKSWG 365
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L ++ I FEE E L PT++T +P EISPLAR+ N EN +T+RFELFI G
Sbjct: 366 LGSVVNAI-----FEEVAEHHLIQPTFLTAHPAEISPLARR-NDENPEVTDRFELFIGGR 419
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND E+Q+ RF Q+ K+ + E + + D D++ ALE+G+PP +G G+G+D
Sbjct: 420 EIGNGFSELNDAEDQAERFDAQVAAKDAGDDE-AMFKDDDFVTALEHGLPPTAGEGLGID 478
Query: 418 RLIMLLTNSKNIRDVILFPHLRN 440
RL ML N+ +IRDVILFP +++
Sbjct: 479 RLAMLFANAPSIRDVILFPAMKH 501
>gi|407803901|ref|ZP_11150732.1| lysyl-tRNA synthetase [Alcanivorax sp. W11-5]
gi|407022151|gb|EKE33907.1| lysyl-tRNA synthetase [Alcanivorax sp. W11-5]
Length = 495
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 208/436 (47%), Positives = 306/436 (70%), Gaps = 19/436 (4%)
Query: 5 VMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTNTG 64
++ + SF +LQD SG +IQ+Y + K++ K++DIGDI+G +G L K+ G
Sbjct: 70 MLDRKSFKVLQDQSG-----RIQIYAT-----KDVQQATKHWDIGDIVGVRGKLCKSGKG 119
Query: 65 ELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIISSI 124
+L + + L+TKSLRPLP K + L++ E++YR RY+DL+ NE+TR+ F+ R +++S I
Sbjct: 120 DLYVMMDEYVLLTKSLRPLPEKHKGLTDTEMRYRQRYVDLMTNEDTRRTFRIRARVVSGI 179
Query: 125 RHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGFNK 184
R ++E+ F E ETP+L PGGA A+PF+THHNSL++ M+LRIAPELYLKRL++GGF++
Sbjct: 180 RRYLEQRGFYEAETPMLQVIPGGATARPFVTHHNSLDLDMYLRIAPELYLKRLVVGGFDR 239
Query: 185 IFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKIDYQ 244
+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y LM TE M++ I +D +G+T + YQ
Sbjct: 240 VFEINRNFRNEGLSTRHNPEFTMVEFYQAYADYNDLMDLTEDMLRTIALDVLGSTDVPYQ 299
Query: 245 GRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNNLKKD 304
G + DF + F ++T+ ++I + P L+++ ++ + L
Sbjct: 300 GEMFDFGQPFARMTVFDSILHFNPDIRAEQLRDEQGARAIATGLGIPLKDSYGLGK---- 355
Query: 305 ILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIANGFS 364
+Q+ +FE+T E +L PT+IT YPTE+SPLAR+S+ N +T+RFE F+ G EIANGFS
Sbjct: 356 -VQIEIFEKTVEHRLMQPTFITEYPTEVSPLARRSDA-NPFVTDRFEFFVGGREIANGFS 413
Query: 365 ELNDPEEQSVRFKNQIDLKNEINGELSS-YYDTDYIHALEYGMPPASGCGIGVDRLIMLL 423
ELND E+Q+ RF++Q K+ G+L + ++D DY+ ALEYGMPP +G GIG+DRL+ML
Sbjct: 414 ELNDAEDQAERFRSQAAEKD--AGDLEAMFFDDDYVTALEYGMPPTAGEGIGIDRLVMLF 471
Query: 424 TNSKNIRDVILFPHLR 439
T++ +IRDVILFPH+R
Sbjct: 472 TDTPSIRDVILFPHMR 487
>gi|163748443|ref|ZP_02155697.1| lysyl-tRNA synthetase [Shewanella benthica KT99]
gi|161332021|gb|EDQ02698.1| lysyl-tRNA synthetase [Shewanella benthica KT99]
Length = 502
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 219/443 (49%), Positives = 306/443 (69%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
R+M K F+++QD SG +IQ Y S ++ K+L F DIGDIIG G L +
Sbjct: 68 RIMAKRGPFLVIQDVSG-----RIQAYASKDV-QKDLKEKFLGLDIGDIIGVTGQLHLSG 121
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE +YR RY+DLI+NE +R F R+++++
Sbjct: 122 KGDLYVNMEEYQLLTKALRPLPEKFHGLTDQETRYRQRYVDLIVNEESRNAFIMRSKVVA 181
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM K +FMEVETP++H PGGA A+PFITHHN+L+++M+LR+APELYLKRL++GGF
Sbjct: 182 AIRNFMIKKEFMEVETPMMHTIPGGATARPFITHHNALDIEMYLRVAPELYLKRLVVGGF 241
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
++FEIN+NFRNEG+SPRHNPEFTM+EFY AY +Y LM TE+M+ I + G+ K+
Sbjct: 242 ERVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEEMLSSIATELCGSPKLP 301
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y +DF + +L++++AIKKY P I ++++ F++ K I +
Sbjct: 302 YGEHTVDFGGPYVRLSMLDAIKKYNPDNETIQSMTYEEVKDVEFMRDLAKSIGMTIEKFW 361
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E +L PT+IT YP +ISPLAR+ N EN+ IT+RFE FI G
Sbjct: 362 TCGQLLEEI-----FGETAEPQLIQPTFITGYPVDISPLARR-NDENHFITDRFEFFIGG 415
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND E+Q RFK Q+ K+ + E + +YD DYI ALE+G+PP +G GIG+
Sbjct: 416 REVANGFSELNDAEDQDQRFKAQVAAKDAGDDE-AMFYDADYIRALEHGLPPTAGQGIGI 474
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL+ML TN+ IRDVILFP +R
Sbjct: 475 DRLVMLFTNTHTIRDVILFPAMR 497
>gi|333367666|ref|ZP_08459913.1| lysine--tRNA ligase [Psychrobacter sp. 1501(2011)]
gi|332978485|gb|EGK15197.1| lysine--tRNA ligase [Psychrobacter sp. 1501(2011)]
Length = 508
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 212/440 (48%), Positives = 310/440 (70%), Gaps = 12/440 (2%)
Query: 4 RVM-GKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM + +FI++QD +G +IQLY++ + + + K+ D+GDI+G G + ++
Sbjct: 80 RVMLNRGAFIVIQDMTG-----RIQLYVARKELTEETLALIKSLDLGDIVGVSGYIGRSG 134
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + + L+TKSLRP+PNKF L++ E +YR+R++DL+ NE++R F R+++IS
Sbjct: 135 KGDLYVHIEEITLLTKSLRPMPNKFHGLADTEARYRNRHLDLMTNEDSRNTFLIRSKVIS 194
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
IR FM FMEVETP++H PGGA+A+PFITHHN+L+M ++LRIAPELYLKRL++GGF
Sbjct: 195 GIRKFMLNERFMEVETPMMHPIPGGAVARPFITHHNALDMPLYLRIAPELYLKRLVVGGF 254
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
++FEIN++FRNEG+S RHNPEFTMIEFY AY +Y LM TE++ ++ D +GTT++
Sbjct: 255 ERVFEINRSFRNEGVSTRHNPEFTMIEFYQAYADYKDLMDLTERLFNELATDILGTTELT 314
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNNLK 302
YQ + F F +L++ +AI +Y ++ + ++ +L + + ++++
Sbjct: 315 YQDENISFKAPFARLSMKDAIAQYADNFDMSKIDDRDYLADYAQNV----LKQQVKEGFG 370
Query: 303 KDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIANG 362
LQ ++FEET E KL PT+IT YP E SPLAR+ N EN IT+RFELFI G EIANG
Sbjct: 371 IGKLQTIIFEETAEHKLRQPTFITEYPAETSPLARR-NDENPEITDRFELFIGGREIANG 429
Query: 363 FSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLIML 422
FSELNDP +Q+ RF NQ+ K+ + E + ++D DYI AL YG+PP +G GIG+DRL+ML
Sbjct: 430 FSELNDPADQAERFHNQVAEKDAGDDE-AMHFDADYIEALSYGLPPTAGEGIGIDRLVML 488
Query: 423 LTNSKNIRDVILFPHLRNEN 442
T++ +IRDVILFPH+R +N
Sbjct: 489 FTDAASIRDVILFPHMRIKN 508
>gi|90413185|ref|ZP_01221181.1| lysyl-tRNA synthetase [Photobacterium profundum 3TCK]
gi|90325876|gb|EAS42328.1| lysyl-tRNA synthetase [Photobacterium profundum 3TCK]
Length = 502
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 224/452 (49%), Positives = 312/452 (69%), Gaps = 32/452 (7%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM K F+ +QD SG +IQ Y +++ + K L + DIGDIIG KG L +
Sbjct: 68 RVMAKRGPFLAIQDVSG-----RIQAY-ADKTVQKELKEKYSGLDIGDIIGVKGQLHLSG 121
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + + +L+TK+LRPLP KF L++QE++YR RY+DLI+NE++R R++++S
Sbjct: 122 KGDLYVTMDNYELLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSRNTMIMRSKVVS 181
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM K DFMEVETP++H PGGA A+PFITHHN+L++ M+LR+APELYLKRL++GGF
Sbjct: 182 AIRNFMTKKDFMEVETPMMHVIPGGATARPFITHHNALDIDMYLRVAPELYLKRLVVGGF 241
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
++FEIN+NFRNEG+SPRHNPEFTM+EFY AY +Y LM TE+M+ I D G+ K+
Sbjct: 242 ERVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYNDLMDLTEEMLSSIATDLHGSPKLP 301
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNNLK 302
Y ++DF + +++++ AIK+Y P EI L E K ++++ N+
Sbjct: 302 YGDAIVDFGGPYPRISMLNAIKQYNPDNAEIQA-----LTYE------KVADRELMANIA 350
Query: 303 K--DIL--------QLM--LFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERF 350
+ DI QL+ +F ET E +L PT+IT YP +ISPLAR+ N N+ IT+RF
Sbjct: 351 RGLDIYVEKFWTCGQLLEEIFGETAEPQLMQPTFITEYPADISPLARR-NDTNDFITDRF 409
Query: 351 ELFIIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPAS 410
E FI G E+ANGFSELND ++Q RFK Q++ K+ + E + YYD DYI ALE+G+PP +
Sbjct: 410 EFFIGGREVANGFSELNDAQDQDQRFKAQVNAKDAGDDE-AMYYDADYITALEHGLPPTA 468
Query: 411 GCGIGVDRLIMLLTNSKNIRDVILFPHLRNEN 442
G GIG+DRL+ML TN+ IRDVILFP LR +N
Sbjct: 469 GQGIGIDRLVMLFTNTHTIRDVILFPALRPQN 500
>gi|94270667|ref|ZP_01291795.1| Lysyl-tRNA synthetase, class-2 [delta proteobacterium MLMS-1]
gi|93450711|gb|EAT01789.1| Lysyl-tRNA synthetase, class-2 [delta proteobacterium MLMS-1]
Length = 495
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 214/441 (48%), Positives = 300/441 (68%), Gaps = 13/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M R GK +F+ LQD+SG +IQ+++ + IG+ Y FK +D+GDI G LF+
Sbjct: 65 MALRRFGKAAFLHLQDSSG-----RIQVHVKRDEIGQQAYATFKKFDVGDIAAFSGPLFR 119
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGE++I+ S+KL+TKSLRPLP KF L++ E +YR RY+DL++N R F++R +I
Sbjct: 120 TKTGEVTIQALSVKLLTKSLRPLPEKFHGLTDIETRYRQRYVDLMVNPEVRDTFRRRVEI 179
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I +R F+ F+EVETP++ GGA AKPF THHN+L + ++LRIAPELYLKRL++G
Sbjct: 180 IRLVRDFLTNRGFLEVETPMMQAIAGGATAKPFKTHHNALGLDLYLRIAPELYLKRLLVG 239
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+S RHNPEFTM+EFY AY Y LM+ E+M+ + M+ GT +
Sbjct: 240 GFERVFEINRNFRNEGLSTRHNPEFTMLEFYQAYATYDELMELAEEMLSWVAMEVCGTMQ 299
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQG+ +D + + + T+ EA+ + L + LK K + + +
Sbjct: 300 ISYQGQEVDLAPPWRRYTMDEALVAVG-GLDAALLDDFAALKELALKKGVELQPQAGIGK 358
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
+K ++ +L++ E KL +PT+IT YPTE+SPLAR+ N EN IT+RFELFI G E+A
Sbjct: 359 VKTELFELLV-----EDKLIDPTFITAYPTEVSPLARR-NQENPEITDRFELFITGREMA 412
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
N FSELNDP++Q R + QI + + E+ D D++ ALEYGMPPA+GCG+G+DRL
Sbjct: 413 NAFSELNDPDDQRQRLEKQIAERGS-DEEIFPVLDEDFLRALEYGMPPAAGCGVGIDRLT 471
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT++ +IRDVILFPHLR E
Sbjct: 472 MLLTDAPSIRDVILFPHLRPE 492
>gi|94267598|ref|ZP_01290933.1| Lysyl-tRNA synthetase, class-2 [delta proteobacterium MLMS-1]
gi|93451927|gb|EAT02649.1| Lysyl-tRNA synthetase, class-2 [delta proteobacterium MLMS-1]
Length = 493
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 214/441 (48%), Positives = 301/441 (68%), Gaps = 13/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M R GK +F+ LQD+SG +IQ+++ + IG+ Y FK +D+GDI G LF+
Sbjct: 63 MALRRFGKAAFLHLQDSSG-----RIQVHVKRDEIGQQAYATFKKFDVGDIAAFSGPLFR 117
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGE++I+ S+KL+TKSLRPLP KF L++ E +YR RY+DL++N R F++R +I
Sbjct: 118 TKTGEVTIQALSVKLLTKSLRPLPEKFHGLTDIETRYRQRYVDLMVNPEVRDTFRRRVEI 177
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I +R F+ F+EVETP++ GGA AKPF THHN+L + ++LRIAPELYLKRL++G
Sbjct: 178 IHLVRDFLTNRGFLEVETPMMQAIAGGATAKPFKTHHNALGLDLYLRIAPELYLKRLLVG 237
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+S RHNPEFTM+EFY AY Y LM+ E+M+ + M+ GT +
Sbjct: 238 GFERVFEINRNFRNEGLSTRHNPEFTMLEFYQAYATYDELMELAEEMLSWVAMEVCGTMQ 297
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I+YQG+ +D + + + T+ EA+ + L + LK K + + +
Sbjct: 298 INYQGQEVDLAPPWRRYTMDEALVAVG-GLDAALLDDFAALKELALKKGVELQPQAGIGK 356
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
+K ++ +L++ E KL +PT+IT YPTE+SPLAR+ N EN IT+RFELFI G E+A
Sbjct: 357 VKTELFELLV-----EDKLIDPTFITAYPTEVSPLARR-NQENPEITDRFELFITGREMA 410
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
N FSELNDP++Q R + QI + + E+ D D++ ALEYGMPPA+GCG+G+DRL
Sbjct: 411 NAFSELNDPDDQRQRLEKQIAERGS-DEEIFPVLDEDFLRALEYGMPPAAGCGVGIDRLT 469
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT++ +IRDVILFPHLR E
Sbjct: 470 MLLTDAPSIRDVILFPHLRPE 490
>gi|126173118|ref|YP_001049267.1| lysyl-tRNA synthetase [Shewanella baltica OS155]
gi|153002000|ref|YP_001367681.1| lysyl-tRNA synthetase [Shewanella baltica OS185]
gi|160876720|ref|YP_001556036.1| lysyl-tRNA synthetase [Shewanella baltica OS195]
gi|217974575|ref|YP_002359326.1| lysyl-tRNA synthetase [Shewanella baltica OS223]
gi|373948335|ref|ZP_09608296.1| Lysyl-tRNA synthetase [Shewanella baltica OS183]
gi|378709931|ref|YP_005274825.1| lysyl-tRNA synthetase [Shewanella baltica OS678]
gi|386325820|ref|YP_006021937.1| lysyl-tRNA synthetase [Shewanella baltica BA175]
gi|386339876|ref|YP_006036242.1| lysyl-tRNA synthetase [Shewanella baltica OS117]
gi|418022043|ref|ZP_12661030.1| Lysyl-tRNA synthetase [Shewanella baltica OS625]
gi|166229825|sp|A3D0Y5.1|SYK_SHEB5 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|166229826|sp|A6WS29.1|SYK_SHEB8 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|189082968|sp|A9L1I0.1|SYK_SHEB9 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|125996323|gb|ABN60398.1| lysyl-tRNA synthetase [Shewanella baltica OS155]
gi|151366618|gb|ABS09618.1| lysyl-tRNA synthetase [Shewanella baltica OS185]
gi|160862242|gb|ABX50776.1| lysyl-tRNA synthetase [Shewanella baltica OS195]
gi|217499710|gb|ACK47903.1| lysyl-tRNA synthetase [Shewanella baltica OS223]
gi|315268920|gb|ADT95773.1| lysyl-tRNA synthetase [Shewanella baltica OS678]
gi|333819965|gb|AEG12631.1| Lysyl-tRNA synthetase [Shewanella baltica BA175]
gi|334862277|gb|AEH12748.1| Lysyl-tRNA synthetase [Shewanella baltica OS117]
gi|353538268|gb|EHC07823.1| Lysyl-tRNA synthetase [Shewanella baltica OS625]
gi|373884935|gb|EHQ13827.1| Lysyl-tRNA synthetase [Shewanella baltica OS183]
Length = 500
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 217/443 (48%), Positives = 309/443 (69%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
R+M K F+++QD SG +IQ Y + + + +L F+ DIGDIIG G L +
Sbjct: 68 RIMAKRGPFLVIQDVSG-----RIQAY-AEKSVQADLKERFQGLDIGDIIGVTGQLHLSG 121
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP + L++QE++YR RY+DLI+NE++R F R++++S
Sbjct: 122 KGDLYVNMEQYELLTKALRPLPADYYGLADQEMRYRQRYVDLIVNEDSRNAFIMRSKVVS 181
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM K +FMEVETP++H PGGA A+PFITHHN+L+M M+LRIAPELYLKRL++GGF
Sbjct: 182 AIRNFMIKKEFMEVETPMMHVIPGGASARPFITHHNALDMPMYLRIAPELYLKRLVVGGF 241
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
++FEIN+NFRNEG+SPRHNPEFTM+EFY AY +Y LM TE+M+ I ++ +G+ ++
Sbjct: 242 ERVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEEMLSSIAIELLGSAQMP 301
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y +DF + +L+++EAI+KY P I +++ F++ K + K +
Sbjct: 302 YGEHTVDFGGPYARLSMLEAIQKYNPDNATIQAMTYEQVKDVEFMRDLAKSLGMKIEKFW 361
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E +L PT+IT YP +ISPLAR+ N +N+ IT+RFE FI G
Sbjct: 362 TCGQLLEEI-----FGETAEWQLMQPTFITGYPADISPLARR-NDDNHFITDRFEFFIGG 415
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND E+Q RFK Q+D K+ + E + +YD DYI ALE+G+PP +G GIG+
Sbjct: 416 REVANGFSELNDAEDQDNRFKAQVDAKDAGDDE-AMFYDADYITALEHGLPPTAGQGIGI 474
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL+ML TN+ IRDVILFP +R
Sbjct: 475 DRLVMLFTNTHTIRDVILFPAMR 497
>gi|254508217|ref|ZP_05120341.1| lysyl-tRNA synthetase [Vibrio parahaemolyticus 16]
gi|219548834|gb|EED25835.1| lysyl-tRNA synthetase [Vibrio parahaemolyticus 16]
Length = 407
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 207/409 (50%), Positives = 292/409 (71%), Gaps = 13/409 (3%)
Query: 37 KNLYTDFKNYDIGDIIGAKGTLFKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIK 96
K L ++ DIGDIIG KG L K+ G+L + + S +L+TK+LRPLP KF L++QE++
Sbjct: 3 KELKEKYQGLDIGDIIGVKGALHKSGKGDLYVNMESYELLTKALRPLPEKFHGLTDQEMR 62
Query: 97 YRHRYIDLIINENTRKVFKKRTQIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITH 156
YR RY+DLI+NE++R+ F R++++S+IR+FM ++EVETP++H PGGA A+PFITH
Sbjct: 63 YRQRYVDLIVNEDSRQAFIIRSKLVSAIRNFMSSKGYLEVETPMMHVIPGGATARPFITH 122
Query: 157 HNSLNMKMFLRIAPELYLKRLIIGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTN 216
HN+L++ M+LR+APELYLKRL++GGF+++FEIN+NFRNEG+SPRHNPEFTM+EFY AY +
Sbjct: 123 HNALDIDMYLRVAPELYLKRLVVGGFDRVFEINRNFRNEGLSPRHNPEFTMMEFYQAYAD 182
Query: 217 YIWLMKFTEKMIKKIIMDCIGTTKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI--- 273
Y LM TE+M+ + MD +G+T + Y ++F + ++++ EAIK Y P + EI
Sbjct: 183 YRDLMDLTEEMLSTVAMDVLGSTSMPYGEETVEFGGKYARMSMFEAIKHYNPDHAEIQAL 242
Query: 274 ---DLQNKLFLKSELKKINPKFNQKKILNNLKKDILQLMLFEETTETKLWNPTYITNYPT 330
DL ++ + + K ++ + L ++I F ET E +L PT+IT YP
Sbjct: 243 TEADLTDREKMVAIAKSVHIEVESFWTCGQLLEEI-----FGETAEPQLIQPTFITGYPA 297
Query: 331 EISPLARKSNIENNNITERFELFIIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGEL 390
+ISPLAR+S+ +N T+RFE FI G E+ANGFSELND E+Q RFK Q+D K+ + E
Sbjct: 298 DISPLARRSD-DNPFFTDRFEFFIGGREVANGFSELNDAEDQDARFKAQVDAKDAGDDE- 355
Query: 391 SSYYDTDYIHALEYGMPPASGCGIGVDRLIMLLTNSKNIRDVILFPHLR 439
+ YYD DYI ALE+G+PP +G GIG+DRL ML TN+ IRDVILFP +R
Sbjct: 356 AMYYDADYITALEHGLPPTAGQGIGIDRLAMLFTNTHTIRDVILFPAMR 404
>gi|378774742|ref|YP_005176985.1| lysyl-tRNA synthase [Pasteurella multocida 36950]
gi|383310714|ref|YP_005363524.1| lysyl-tRNA synthetase [Pasteurella multocida subsp. multocida str.
HN06]
gi|356597290|gb|AET16016.1| lysyl-tRNA synthase [Pasteurella multocida 36950]
gi|380871986|gb|AFF24353.1| lysyl-tRNA synthetase [Pasteurella multocida subsp. multocida str.
HN06]
Length = 501
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 218/443 (49%), Positives = 309/443 (69%), Gaps = 15/443 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R MGK +FI LQD SG +IQLYI+ + + + +Y D +D+GDIIG KGTLF
Sbjct: 70 MTRRAMGKATFITLQDMSG-----RIQLYIARDNLPEGVYADDVGQWDLGDIIGVKGTLF 124
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL+++ + ++L+TK+LRPLP+KF LS+QE +YR RY+DLI NE++R+ F R++
Sbjct: 125 KTKTNELTVRCTEVQLLTKALRPLPDKFHGLSDQETRYRQRYLDLIANEDSRRTFIIRSK 184
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+I+ IR + FMEVETP+L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 185 VIAGIREYFLSKGFMEVETPMLQIIPGGASARPFVTHHNALDVDMYLRIAPELYLKRLVV 244
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTM+E+Y AY +Y LM TE++++K+ MD +GTT
Sbjct: 245 GGFERVFELNRNFRNEGVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAMDILGTT 304
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI--DLQNKLFLKSELKKINPKFNQKKI 297
+ Y DF K FE++T+ +AI KY + + DL + + KK+ + +
Sbjct: 305 IVPYGELEFDFGKPFERITMHDAILKYGAEKGIVKEDLYDFDRAVAVAKKLGIEVQKSWG 364
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L +L ++FEE E L PT++ +P EISPLAR+ N EN +T+RFELFI G
Sbjct: 365 LGSLVN-----VIFEEVAEHHLIQPTFLMAHPAEISPLARR-NDENPEVTDRFELFIGGR 418
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND E+Q+ RF Q+ K E + + + D D++ ALE+G+PP +G G+G+D
Sbjct: 419 EIGNGFSELNDAEDQNERFDAQVAAK-EAGDDEAMFKDEDFVTALEHGLPPTAGEGLGID 477
Query: 418 RLIMLLTNSKNIRDVILFPHLRN 440
RL ML N+ +IRDVILFP ++
Sbjct: 478 RLAMLFANAASIRDVILFPAMKQ 500
>gi|417852534|ref|ZP_12498090.1| lysyl-tRNA synthetase [Pasteurella multocida subsp. gallicida str.
Anand1_poultry]
gi|338216713|gb|EGP02721.1| lysyl-tRNA synthetase [Pasteurella multocida subsp. gallicida str.
Anand1_poultry]
Length = 501
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 217/443 (48%), Positives = 309/443 (69%), Gaps = 15/443 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R MGK +FI LQD SG +IQLY++ + + + +Y D +D+GDIIG KGTLF
Sbjct: 70 MTRRAMGKATFITLQDMSG-----RIQLYVARDNLPEGVYADDVGQWDLGDIIGVKGTLF 124
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL+++ + ++L+TK+LRPLP+KF LS+QE +YR RY+DLI NE++R+ F R++
Sbjct: 125 KTKTNELTVRCTDVQLLTKALRPLPDKFHGLSDQETRYRQRYLDLIANEDSRRTFIIRSK 184
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+I+ IR + FMEVETP+L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 185 VIAGIREYFLSKGFMEVETPMLQIIPGGASARPFVTHHNALDVDMYLRIAPELYLKRLVV 244
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTM+E+Y AY +Y LM TE++++K+ MD +GTT
Sbjct: 245 GGFERVFELNRNFRNEGVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAMDILGTT 304
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI--DLQNKLFLKSELKKINPKFNQKKI 297
+ Y DF K FE++T+ +AI KY + + DL + + KK+ + +
Sbjct: 305 IVPYGELEFDFGKPFERITMHDAILKYGAEKGIVKEDLYDFDRAVAVAKKLGIEVQKSWD 364
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L +L ++FEE E L PT++ +P EISPLAR+ N EN +T+RFELFI G
Sbjct: 365 LGSLVN-----VIFEEVAEHHLIQPTFLMAHPAEISPLARR-NDENPEVTDRFELFIGGR 418
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND E+Q+ RF Q+ K E + + + D D++ ALE+G+PP +G G+G+D
Sbjct: 419 EIGNGFSELNDAEDQNERFDAQVAAK-EAGDDEAMFKDEDFVTALEHGLPPTAGEGLGID 477
Query: 418 RLIMLLTNSKNIRDVILFPHLRN 440
RL ML N+ +IRDVILFP ++
Sbjct: 478 RLAMLFANAASIRDVILFPAMKQ 500
>gi|15602054|ref|NP_245126.1| lysyl-tRNA synthetase [Pasteurella multocida subsp. multocida str.
Pm70]
gi|13431878|sp|P57822.1|SYK_PASMU RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|12720410|gb|AAK02273.1| LysU [Pasteurella multocida subsp. multocida str. Pm70]
Length = 501
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 217/443 (48%), Positives = 309/443 (69%), Gaps = 15/443 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R MGK +FI LQD SG +IQLY++ + + + +Y D +D+GDIIG KGTLF
Sbjct: 70 MTRRAMGKATFITLQDMSG-----RIQLYVARDNLPEGIYADDVGQWDLGDIIGVKGTLF 124
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL+++ + ++L+TK+LRPLP+KF LS+QE +YR RY+DLI NE++R+ F R++
Sbjct: 125 KTKTNELTVRCTEVQLLTKALRPLPDKFHGLSDQETRYRQRYLDLIANEDSRRTFIIRSK 184
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+I+ IR + FMEVETP+L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 185 VIAGIREYFLSKGFMEVETPMLQIIPGGASARPFVTHHNALDVDMYLRIAPELYLKRLVV 244
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTM+E+Y AY +Y LM TE++++K+ MD +GTT
Sbjct: 245 GGFERVFELNRNFRNEGVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAMDILGTT 304
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI--DLQNKLFLKSELKKINPKFNQKKI 297
+ Y DF K FE++T+ +AI KY + + DL + + KK+ + +
Sbjct: 305 IVPYGELEFDFGKPFERITMHDAILKYGAEKGIVKEDLYDFDRAVAVAKKLGIEVQKSWG 364
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L +L ++FEE E L PT++ +P EISPLAR+ N EN +T+RFELFI G
Sbjct: 365 LGSLVN-----VIFEEVAEHHLIQPTFLMAHPAEISPLARR-NDENPEVTDRFELFIGGR 418
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND E+Q+ RF Q+ K E + + + D D++ ALE+G+PP +G G+G+D
Sbjct: 419 EIGNGFSELNDAEDQNERFDAQVAAK-EAGDDEAMFKDEDFVTALEHGLPPTAGEGLGID 477
Query: 418 RLIMLLTNSKNIRDVILFPHLRN 440
RL ML N+ +IRDVILFP ++
Sbjct: 478 RLAMLFANAASIRDVILFPAMKQ 500
>gi|386834705|ref|YP_006240022.1| lysyl-tRNA synthetase [Pasteurella multocida subsp. multocida str.
3480]
gi|385201408|gb|AFI46263.1| lysyl-tRNA synthetase [Pasteurella multocida subsp. multocida str.
3480]
Length = 501
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 217/443 (48%), Positives = 309/443 (69%), Gaps = 15/443 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R MGK +FI LQD SG +IQLY++ + + + +Y D +D+GDIIG KGTLF
Sbjct: 70 MTRRAMGKATFITLQDMSG-----RIQLYVARDNLPEGVYADDVGQWDLGDIIGVKGTLF 124
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL+++ + ++L+TK+LRPLP+KF LS+QE +YR RY+DLI NE++R+ F R++
Sbjct: 125 KTKTNELTVRCTEVQLLTKALRPLPDKFHGLSDQETRYRQRYLDLIANEDSRRTFIIRSK 184
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+I+ IR + FMEVETP+L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 185 VIAGIREYFLSKGFMEVETPMLQIIPGGASARPFVTHHNALDVDMYLRIAPELYLKRLVV 244
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTM+E+Y AY +Y LM TE++++K+ MD +GTT
Sbjct: 245 GGFERVFELNRNFRNEGVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAMDILGTT 304
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI--DLQNKLFLKSELKKINPKFNQKKI 297
+ Y DF K FE++T+ +AI KY + + DL + + KK+ + +
Sbjct: 305 IVPYGELEFDFGKPFERITMHDAILKYGAEKGIVKEDLYDFDRAVAVAKKLGIEVQKSWG 364
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L +L ++FEE E L PT++ +P EISPLAR+ N EN +T+RFELFI G
Sbjct: 365 LGSLVN-----VIFEEVAEHHLIQPTFLMAHPAEISPLARR-NDENPEVTDRFELFIGGR 418
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND E+Q+ RF Q+ K E + + + D D++ ALE+G+PP +G G+G+D
Sbjct: 419 EIGNGFSELNDAEDQNERFDAQVAAK-EAGDDEAMFKDEDFVTALEHGLPPTAGEGLGID 477
Query: 418 RLIMLLTNSKNIRDVILFPHLRN 440
RL ML N+ +IRDVILFP ++
Sbjct: 478 RLAMLFANAASIRDVILFPAMKQ 500
>gi|408419456|ref|YP_006760870.1| lysyl-tRNA synthetase LysS [Desulfobacula toluolica Tol2]
gi|405106669|emb|CCK80166.1| LysS: lysyl-tRNA synthetase [Desulfobacula toluolica Tol2]
Length = 493
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 222/437 (50%), Positives = 301/437 (68%), Gaps = 19/437 (4%)
Query: 6 MGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTNTGE 65
MGK SF+ +D S ++Q+Y+ +G Y+ FK DIGD IG KG LFKT TGE
Sbjct: 69 MGKSSFVRFKDGSD-----QLQVYLQQNRVGDETYSLFKKLDIGDFIGVKGPLFKTRTGE 123
Query: 66 LSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIISSIR 125
++ +L++K++RPLP KF + + E +YR RY+DL++NE+TR++F KR+QI++S+R
Sbjct: 124 WTLLADKFRLLSKAVRPLPEKFHGIKDPEKRYRQRYLDLVMNEDTRQIFIKRSQIVASMR 183
Query: 126 HFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGFNKI 185
F E+ FMEVETP++ GGA A PF T HN+L M++FLRIAPELYLKRL++GGF K+
Sbjct: 184 RFFEEKGFMEVETPMMQPLAGGAEATPFKTWHNALGMELFLRIAPELYLKRLVVGGFEKV 243
Query: 186 FEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKIDYQG 245
FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y LM TE+M + I G+T +DYQG
Sbjct: 244 FEINRNFRNEGVSTRHNPEFTMVEFYQAYADYEQLMDMTEEMFESIAQQVSGSTTVDYQG 303
Query: 246 RLLDFSKSFEKLTIIEAIKKYTPQYNEI--DLQNKL-FLKSELKKINPKFNQKKILNNLK 302
+ +DF K ++++ +IE++ K EI D Q L F + +I K KIL
Sbjct: 304 QSIDFKKGWQRIPMIESLTKIGGIDPEIIDDTQALLKFAQDNNIQITKKDRHGKILTK-- 361
Query: 303 KDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIANG 362
LF+ E KL PT+IT YP E+SPL+RKS +N +T+RFELFI G EIANG
Sbjct: 362 -------LFDILVEPKLIQPTFITGYPVEVSPLSRKSE-DNPELTDRFELFIAGREIANG 413
Query: 363 FSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLIML 422
FSE+NDPE+Q RF Q+ ++E N E + D++Y+ ALEYGMPP +G GIG+DRL+ML
Sbjct: 414 FSEINDPEDQHNRFLMQVQQRDEGNSE-AHIMDSEYVEALEYGMPPTAGEGIGIDRLVML 472
Query: 423 LTNSKNIRDVILFPHLR 439
LTNS +IR+VILFPH++
Sbjct: 473 LTNSASIREVILFPHMK 489
>gi|389580319|ref|ZP_10170346.1| lysyl-tRNA synthetase (class II) [Desulfobacter postgatei 2ac9]
gi|389401954|gb|EIM64176.1| lysyl-tRNA synthetase (class II) [Desulfobacter postgatei 2ac9]
Length = 492
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 216/449 (48%), Positives = 309/449 (68%), Gaps = 39/449 (8%)
Query: 6 MGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTNTGE 65
MGK SF+ QD + ++Q+YI +G ++Y FK DIGD IG +G LF+T TGE
Sbjct: 70 MGKSSFVRFQD-----AGEQMQVYIQKNKVGDDIYALFKKLDIGDFIGVEGPLFQTRTGE 124
Query: 66 LSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIISSIR 125
++ S +L++KS+RPLP KF + + E +YR RY+DLI+NENTR++FKKR+ I++++R
Sbjct: 125 WTLLAESFRLLSKSVRPLPEKFHGIKDPEKRYRQRYLDLIMNENTRQIFKKRSAIVAAMR 184
Query: 126 HFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGFNKI 185
F ++N FMEVETP++ PGGA A PF T HN+L M+++LRIAPELYLKRL++GGF K+
Sbjct: 185 RFFDENGFMEVETPMMQTLPGGAEATPFKTWHNALGMELYLRIAPELYLKRLVVGGFEKV 244
Query: 186 FEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKIDYQG 245
FEIN+NFRNEG+S RHNPEFTM+EFY AY Y LM TE+M I+ G T+I+YQG
Sbjct: 245 FEINRNFRNEGVSTRHNPEFTMVEFYQAYATYEDLMNLTEEMFCDIVTQISGDTRIEYQG 304
Query: 246 RLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKF--NQKKILNNLKK 303
+DF+K ++++++I+++ SE+ ++P + + +L + +K
Sbjct: 305 LTIDFAKGWKRISMIDSL-------------------SEIGGVDPAIVNDTQALLAHAEK 345
Query: 304 DILQLM-----------LFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFEL 352
+ +Q+ LF+ E KL PT+IT YP E+SPL+RKS + +T+RFEL
Sbjct: 346 ENIQIAKKDRHGKVMTKLFDALVEPKLIQPTFITGYPVEVSPLSRKSEA-DPELTDRFEL 404
Query: 353 FIIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGC 412
FI G EIANGFSE+NDPE+Q RF Q+ ++E N E + DT+Y+ ALEYGMPP +G
Sbjct: 405 FIAGREIANGFSEINDPEDQYNRFIMQVRQRDEGNDE-AHIMDTEYVEALEYGMPPTAGE 463
Query: 413 GIGVDRLIMLLTNSKNIRDVILFPHLRNE 441
GIG+DRL+MLLT++ +IR+VILFPH++N+
Sbjct: 464 GIGIDRLVMLLTDAASIREVILFPHMKNQ 492
>gi|92115113|ref|YP_575041.1| lysyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
gi|122990398|sp|Q1QT66.1|SYK_CHRSD RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|91798203|gb|ABE60342.1| lysyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
Length = 502
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 210/438 (47%), Positives = 303/438 (69%), Gaps = 15/438 (3%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
R+M K FI++QD S +IQLY+ + + D K++DIGDI+ A+G + K+
Sbjct: 74 RIMRKRGPFIVIQDVSD-----QIQLYVDKKGLPAETLDDIKSWDIGDIVAARGPVHKSG 128
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TKSLRPLP+K+ L++ E +YR RY+DLI+N +R+VF+ R+++IS
Sbjct: 129 KGDLYVMMGEAQLLTKSLRPLPDKYHGLTDTEARYRQRYVDLIMNPESRRVFEVRSRVIS 188
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
IR F+ + FMEVETP+L PGGA A+PF+THHN+L++ M+LR+APELYLKRL++GGF
Sbjct: 189 GIRRFLVERGFMEVETPMLQQIPGGATARPFVTHHNALDIDMYLRVAPELYLKRLVVGGF 248
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
++FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y L+ TE MI+ + + +GTT ++
Sbjct: 249 ERVFEINRNFRNEGLSTRHNPEFTMLEFYWAYADYRDLLDLTEAMIRDVAHEVLGTTTVE 308
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNNLK 302
YQG + + F++LT+ ++I +Y E D+ ++ +++ L L+
Sbjct: 309 YQGARYELGEPFQRLTLRQSILEYGDGLGESDIDTFDGARATCERLGIPVKPSWGLGKLQ 368
Query: 303 KDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIANG 362
+I FE E KL PT+IT YP E+SPLAR+ N N ++T+RFE F+ G E+ANG
Sbjct: 369 TEI-----FEAVAEDKLDRPTFITEYPAEVSPLARR-NDTNPHVTDRFEFFVGGRELANG 422
Query: 363 FSELNDPEEQSVRFKNQIDLKNEINGELSS-YYDTDYIHALEYGMPPASGCGIGVDRLIM 421
FSELND E+Q+ RF Q K+ G+L + YYD DY+ ALEYGMPP +G GIG+DRL+M
Sbjct: 423 FSELNDAEDQAERFAAQAAEKD--AGDLEAMYYDADYVRALEYGMPPTAGEGIGIDRLVM 480
Query: 422 LLTNSKNIRDVILFPHLR 439
LLT+S +IRDV+LFP +R
Sbjct: 481 LLTDSPSIRDVLLFPAMR 498
>gi|417853871|ref|ZP_12499214.1| lysyl-tRNA synthetase [Pasteurella multocida subsp. multocida str.
Anand1_goat]
gi|425062872|ref|ZP_18465997.1| Lysyl-tRNA synthetase (class II) [Pasteurella multocida subsp.
gallicida X73]
gi|338218908|gb|EGP04634.1| lysyl-tRNA synthetase [Pasteurella multocida subsp. multocida str.
Anand1_goat]
gi|404383578|gb|EJZ80029.1| Lysyl-tRNA synthetase (class II) [Pasteurella multocida subsp.
gallicida X73]
Length = 501
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 217/443 (48%), Positives = 309/443 (69%), Gaps = 15/443 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R MGK +FI LQD SG +IQLY++ + + + +Y D +D+GDIIG KGTLF
Sbjct: 70 MTRRAMGKATFITLQDMSG-----RIQLYVARDNLPEGVYADDVGQWDLGDIIGVKGTLF 124
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL+++ + ++L+TK+LRPLP+KF LS+QE +YR RY+DLI NE++R+ F R++
Sbjct: 125 KTKTNELTVRCTDVQLLTKALRPLPDKFHGLSDQETRYRQRYLDLIANEDSRRTFIIRSK 184
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+I+ IR + FMEVETP+L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 185 VIAGIREYFLSKGFMEVETPMLQIIPGGASARPFVTHHNALDVDMYLRIAPELYLKRLVV 244
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTM+E+Y AY +Y LM TE++++K+ MD +GTT
Sbjct: 245 GGFERVFELNRNFRNEGVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAMDILGTT 304
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI--DLQNKLFLKSELKKINPKFNQKKI 297
+ Y DF K FE++T+ +AI KY + + DL + + KK+ + +
Sbjct: 305 IVPYGELEFDFGKPFERITMHDAILKYGAEKGIVKEDLYDFDRAVAVAKKLGIEVQKSWG 364
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L +L ++FEE E L PT++ +P EISPLAR+ N EN +T+RFELFI G
Sbjct: 365 LGSLVN-----VIFEEVAEHHLIQPTFLMAHPAEISPLARR-NDENPEVTDRFELFIGGR 418
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND E+Q+ RF Q+ K E + + + D D++ ALE+G+PP +G G+G+D
Sbjct: 419 EIGNGFSELNDAEDQNERFDAQVAAK-EAGDDEAMFKDEDFVTALEHGLPPTAGEGLGID 477
Query: 418 RLIMLLTNSKNIRDVILFPHLRN 440
RL ML N+ +IRDVILFP ++
Sbjct: 478 RLAMLFANAASIRDVILFPAMKQ 500
>gi|421262903|ref|ZP_15713988.1| lysyl-tRNA synthetase [Pasteurella multocida subsp. multocida str.
P52VAC]
gi|425064953|ref|ZP_18468073.1| Lysyl-tRNA synthetase (class II) [Pasteurella multocida subsp.
gallicida P1059]
gi|401690316|gb|EJS85597.1| lysyl-tRNA synthetase [Pasteurella multocida subsp. multocida str.
P52VAC]
gi|404384668|gb|EJZ81101.1| Lysyl-tRNA synthetase (class II) [Pasteurella multocida subsp.
gallicida P1059]
Length = 501
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 217/443 (48%), Positives = 309/443 (69%), Gaps = 15/443 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R MGK +FI LQD SG +IQLY++ + + + +Y D +D+GDIIG KGTLF
Sbjct: 70 MTRRAMGKATFITLQDMSG-----RIQLYVARDNLPEGVYADDVGQWDLGDIIGVKGTLF 124
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL+++ + ++L+TK+LRPLP+KF LS+QE +YR RY+DLI NE++R+ F R++
Sbjct: 125 KTKTNELTVRCTDVQLLTKALRPLPDKFHGLSDQETRYRQRYLDLIANEDSRRTFIIRSK 184
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+I+ IR + FMEVETP+L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 185 VIAGIREYFLSKGFMEVETPMLQIIPGGASARPFVTHHNALDVDMYLRIAPELYLKRLVV 244
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTM+E+Y AY +Y LM TE++++K+ MD +GTT
Sbjct: 245 GGFERVFELNRNFRNEGVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAMDILGTT 304
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI--DLQNKLFLKSELKKINPKFNQKKI 297
+ Y DF K FE++T+ +AI KY + + DL + + KK+ + +
Sbjct: 305 IVPYGELEFDFGKPFERITMHDAILKYGAEKGIVKEDLYDFDRAVAVAKKLGIEVQKSWG 364
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L +L ++FEE E L PT++ +P EISPLAR+ N EN +T+RFELFI G
Sbjct: 365 LGSLVN-----VIFEEVAEHHLIQPTFLMAHPAEISPLARR-NDENPEVTDRFELFIGGR 418
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND E+Q+ RF Q+ K E + + + D D++ ALE+G+PP +G G+G+D
Sbjct: 419 EIGNGFSELNDAEDQNERFDAQVAAK-EAGDDEAMFKDEDFVTALEHGLPPTAGEGLGID 477
Query: 418 RLIMLLTNSKNIRDVILFPHLRN 440
RL ML N+ +IRDVILFP ++
Sbjct: 478 RLAMLFANAASIRDVILFPAMKQ 500
>gi|408374691|ref|ZP_11172375.1| lysyl-tRNA synthetase [Alcanivorax hongdengensis A-11-3]
gi|407765499|gb|EKF73952.1| lysyl-tRNA synthetase [Alcanivorax hongdengensis A-11-3]
Length = 496
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 207/435 (47%), Positives = 308/435 (70%), Gaps = 17/435 (3%)
Query: 5 VMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTNTG 64
++ + +F +LQD SG +IQ+Y + K++ D K++D+GDIIG +GTL K+ G
Sbjct: 75 MLDRKAFKVLQDMSG-----RIQVYAT-----KDVQKDTKHWDLGDIIGVRGTLCKSGKG 124
Query: 65 ELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIISSI 124
+L + + L+TKSLRPLP K + L++ E KYR RY+DLI+NE+TRK F+ R+Q+++ I
Sbjct: 125 DLYVMMDEYVLLTKSLRPLPEKHKGLTDTEAKYRQRYVDLIVNEDTRKAFQIRSQVVAGI 184
Query: 125 RHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGFNK 184
R+F+ + F+E ETP+L PGGA A+PF+T+HNSL++ M+LRIAPELYLKRL++GGF K
Sbjct: 185 RNFLVQKGFVEAETPMLQVIPGGATARPFVTYHNSLDLDMYLRIAPELYLKRLVVGGFEK 244
Query: 185 IFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKIDYQ 244
+FEIN+NFRNEG+S RHNPEFTM+EFY A+ +Y LM TE+M++ + +G+T + YQ
Sbjct: 245 VFEINRNFRNEGLSTRHNPEFTMLEFYQAFADYRDLMNLTEEMLRTVAQSVLGSTDVHYQ 304
Query: 245 GRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNNLKKD 304
G + DF K F ++T+ ++I + P + L ++ + + + L
Sbjct: 305 GDVYDFGKPFARMTVFDSIVHFNPDIDPAQLADEQGARRIAEGLGIPLKDGYGLGK---- 360
Query: 305 ILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIANGFS 364
+Q+ +FE+T E +L +PT+IT YPTE+SPLAR+S+ N +T+RFE F+ G EIANGFS
Sbjct: 361 -VQIEIFEKTVEHRLKDPTFITEYPTEVSPLARRSDA-NPFVTDRFEFFVGGREIANGFS 418
Query: 365 ELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLIMLLT 424
ELND E+Q+ RF+ Q++ K E + + ++D DY+ ALE+G+PP +G GIG+DRL+ML T
Sbjct: 419 ELNDAEDQAERFRKQVEEK-EAGDDEAMFFDEDYVVALEHGLPPTAGEGIGIDRLVMLFT 477
Query: 425 NSKNIRDVILFPHLR 439
++ +IRDVILFPH+R
Sbjct: 478 DAPSIRDVILFPHMR 492
>gi|258406354|ref|YP_003199096.1| lysyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
gi|257798581|gb|ACV69518.1| lysyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
Length = 504
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 211/446 (47%), Positives = 305/446 (68%), Gaps = 21/446 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M R GK +F+ +QD S GK+Q+++ + +G +LY FK +D+GDI+G +GTLF+
Sbjct: 73 MAIRSFGKATFMHIQD-----STGKLQVFVQRDAVGADLYKLFKKFDVGDIVGVRGTLFR 127
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T T EL++K ++L+TKS+RPLP K+ L + E +YR RY+DLI+ R +F KRT+I
Sbjct: 128 TRTDELTLKAEHVELVTKSMRPLPEKYHGLKDVETRYRQRYVDLIVTPQARDIFVKRTRI 187
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+ +RHF++ FMEVETP++ + PGGA A+PF+THHN+L+M+++LRIAPELYLKRL++G
Sbjct: 188 VQGLRHFLDNRGFMEVETPMMQHIPGGATARPFVTHHNALDMELYLRIAPELYLKRLLVG 247
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G +++EIN+NFRNEGIS +HNPEFTM+EFY AY + LM TE+M ++ D GTT+
Sbjct: 248 GLERVYEINRNFRNEGISTQHNPEFTMLEFYWAYADVYDLMDLTEEMFAQLAQDVCGTTR 307
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYT----PQYNEIDLQNKLFLKSELKKINPKFNQKK 296
I YQG+ ++ + +LT +A+++ QY + D L ++++ +
Sbjct: 308 ITYQGQEIELGGRWNRLTFHQALEEIGGLEPQQYQDHDQAQAL-----VQRLGENVQTGE 362
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L Q LF+ E KL P +I++YPT+ISPL+R+ N EN +T+RFELFI G
Sbjct: 363 QLGK-----TQAKLFDLLVEPKLIQPHFISHYPTDISPLSRR-NEENPELTDRFELFICG 416
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+AN FSELNDP +Q RF+ Q+ K+ + E + D DY+ ALEYGMPPA+G G+G+
Sbjct: 417 REMANAFSELNDPFDQRQRFEQQVQEKSAGDDEAHA-MDEDYLRALEYGMPPAAGQGVGI 475
Query: 417 DRLIMLLTNSKNIRDVILFPHLRNEN 442
DRL+MLLT+S +IR+VILFP LR E
Sbjct: 476 DRLVMLLTDSASIREVILFPLLRPET 501
>gi|54307775|ref|YP_128795.1| lysyl-tRNA synthetase [Photobacterium profundum SS9]
gi|81400152|sp|Q6LUN2.1|SYK_PHOPR RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|46912198|emb|CAG18993.1| putative lysyl-tRNA synthetase [Photobacterium profundum SS9]
Length = 502
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 218/446 (48%), Positives = 308/446 (69%), Gaps = 20/446 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
RVM K F+ +QD SG +IQ Y +++ + K L + DIGDIIG KG L +
Sbjct: 68 RVMAKRGPFLAIQDVSG-----RIQAY-ADKTVQKELKEKYSGLDIGDIIGVKGQLHLSG 121
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + + +L+TK+LRPLP KF L++QE +YR RY+DLI+NE++R R++++S
Sbjct: 122 KGDLYVTMDNYELLTKALRPLPEKFHGLTDQETRYRQRYVDLIVNEDSRNTMIMRSKVVS 181
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM K DFMEVETP++H PGGA A+PFITHHN+L++ M+LR+APELYLKRL++GGF
Sbjct: 182 AIRNFMMKKDFMEVETPMMHVIPGGATARPFITHHNALDIDMYLRVAPELYLKRLVVGGF 241
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
++FEIN+NFRNEG+SPRHNPEFTM+EFY AY +Y LM TE+M+ I D G+ K+
Sbjct: 242 ERVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYNDLMDLTEEMLSSIATDLHGSPKLP 301
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y ++DF + +++++ AIK+Y P EI + ++ + + + ++ +
Sbjct: 302 YGDAIVDFGGPYPRISMLNAIKQYNPDNAEIQALTYEQVADRELMANIARGLDIYVEKFW 361
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E +L PT+IT YP +ISPLAR+ N N+ IT+RFE FI G
Sbjct: 362 TCGQLLEEI-----FGETAEPQLMQPTFITEYPADISPLARR-NDTNDFITDRFEFFIGG 415
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND ++Q RFK Q++ K+ + E + YYD DYI ALE+G+PP +G GIG+
Sbjct: 416 REVANGFSELNDAQDQDQRFKAQVNAKDAGDDE-AMYYDADYITALEHGLPPTAGQGIGI 474
Query: 417 DRLIMLLTNSKNIRDVILFPHLRNEN 442
DRL+ML TN+ IRDVILFP LR +N
Sbjct: 475 DRLVMLFTNTHTIRDVILFPALRPQN 500
>gi|52425598|ref|YP_088735.1| lysyl-tRNA synthetase [Mannheimia succiniciproducens MBEL55E]
gi|81386871|sp|Q65SB0.1|SYK_MANSM RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|52307650|gb|AAU38150.1| LysU protein [Mannheimia succiniciproducens MBEL55E]
Length = 503
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 216/445 (48%), Positives = 311/445 (69%), Gaps = 15/445 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYT-DFKNYDIGDIIGAKGTLF 59
M +R MGK +FI +QD SG KIQLY++ + + + +Y D K++D+GDI+G KGTLF
Sbjct: 71 MTRRTMGKATFITIQDMSG-----KIQLYVARDNLPEGVYGEDVKSWDLGDIVGIKGTLF 125
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL++K ++L+TK+LRPLP+KF LS+QE +YR RY+DLI NE +R+ F R++
Sbjct: 126 KTKTNELTVKAHEVQLLTKALRPLPDKFHGLSDQETRYRQRYLDLISNEESRRTFVIRSK 185
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+I+ IR + F+EVETP+L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 186 VIAGIREYFIGKGFIEVETPMLQVIPGGAAARPFVTHHNALDIDMYLRIAPELYLKRLVV 245
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTMIE+Y AY +Y LM TE++++K+ +D +GTT
Sbjct: 246 GGFERVFELNRNFRNEGVSVRHNPEFTMIEYYQAYADYHDLMDNTEELLRKLALDILGTT 305
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI--DLQNKLFLKSELKKINPKFNQKKI 297
+ Y DF K FE++T+ +A+ KY + + DL + K+ K+ + +
Sbjct: 306 IVPYGEYEFDFGKPFERITMHDAVIKYGAEKGIVKEDLYDLDRAKAAAAKLGIEIQKSWG 365
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L ++ I FEE E L PT++ +P EISPLAR+ N EN +T+RFELFI G
Sbjct: 366 LGSIVNAI-----FEEVAEHHLIQPTFLMAHPAEISPLARR-NDENPEVTDRFELFIGGR 419
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND E+Q+ RF Q+ K+ + E + + D D++ ALE+G+PP +G G+G+D
Sbjct: 420 EIGNGFSELNDAEDQAERFDAQVAAKDAGDDE-AMFKDDDFVTALEHGLPPTAGEGLGID 478
Query: 418 RLIMLLTNSKNIRDVILFPHLRNEN 442
RL ML N+ +IRDVILFP ++++
Sbjct: 479 RLAMLFANAPSIRDVILFPAMKHKG 503
>gi|88797977|ref|ZP_01113564.1| lysyl-tRNA synthetase [Reinekea blandensis MED297]
gi|88779174|gb|EAR10362.1| lysyl-tRNA synthetase [Reinekea sp. MED297]
Length = 510
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 209/422 (49%), Positives = 302/422 (71%), Gaps = 12/422 (2%)
Query: 21 DSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTNTGELSIKVSS---LKLIT 77
D G IQ Y+ + ++ D+K DIGD++G GTL K+ GEL + V + ++++T
Sbjct: 92 DVTGSIQFYMPKPLQKES--DDWKLLDIGDLVGVTGTLSKSGKGELYVSVEAIEDMRILT 149
Query: 78 KSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIISSIRHFMEKNDFMEVE 137
KSLRPLP+K+ L++QE KYR RY+DLIIN+ TR VF+ R++++S IR+++ DFMEVE
Sbjct: 150 KSLRPLPDKYHGLADQEAKYRQRYVDLIINDQTRSVFEVRSKVVSGIRNYLSSRDFMEVE 209
Query: 138 TPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGFNKIFEINKNFRNEGI 197
TP+L PGGA A+PFITHHN+++ ++LRIAPELYLKRL++GG ++FEIN+++RNEG+
Sbjct: 210 TPMLQVIPGGATARPFITHHNAMDRDLYLRIAPELYLKRLVVGGLERVFEINRSYRNEGV 269
Query: 198 SPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKIDYQGRLLDFSKSFEKL 257
S RHNPEFTM+E+Y AY +Y LM TE M++ + D +GTT+I YQGR DF++ FE++
Sbjct: 270 STRHNPEFTMLEWYQAYADYNDLMDMTEDMLRTVAKDALGTTEIHYQGRDYDFAQPFERV 329
Query: 258 TIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNNLKKDILQLMLFEETTET 317
T+ +AI K+ P+ L+++ + K + L L+ +I FEET E
Sbjct: 330 TMFDAILKHNPEVTAEQLKDRDAAAAIAKALGINVQDGWGLGKLQTEI-----FEETVEE 384
Query: 318 KLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIANGFSELNDPEEQSVRFK 377
+L+ P +IT YP E+SPLAR+ N N ++T+RFE F+ G EIANGFSELNDP +Q+ RF+
Sbjct: 385 QLFGPVFITEYPAEVSPLARR-NDANPDVTDRFEFFLGGREIANGFSELNDPIDQAERFQ 443
Query: 378 NQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLIMLLTNSKNIRDVILFPH 437
Q+ K+ + E + +YD DYI+ALEYG+PP +G GIG+DRL+M LT+S +I+DVILFPH
Sbjct: 444 AQVAEKDAGDDE-AMFYDADYINALEYGLPPTAGEGIGIDRLVMFLTDSPSIKDVILFPH 502
Query: 438 LR 439
++
Sbjct: 503 MK 504
>gi|120597726|ref|YP_962300.1| lysyl-tRNA synthetase [Shewanella sp. W3-18-1]
gi|146294137|ref|YP_001184561.1| lysyl-tRNA synthetase [Shewanella putrefaciens CN-32]
gi|386314855|ref|YP_006011020.1| lysyl-tRNA synthetase [Shewanella putrefaciens 200]
gi|166229828|sp|A4Y9X9.1|SYK_SHEPC RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|166230589|sp|A1RGF1.1|SYK_SHESW RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|120557819|gb|ABM23746.1| lysyl-tRNA synthetase [Shewanella sp. W3-18-1]
gi|145565827|gb|ABP76762.1| lysyl-tRNA synthetase [Shewanella putrefaciens CN-32]
gi|319427480|gb|ADV55554.1| lysyl-tRNA synthetase [Shewanella putrefaciens 200]
Length = 500
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 215/443 (48%), Positives = 308/443 (69%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
R+M K F+++QD SG +IQ Y + + + +L ++ DIGDIIG G L +
Sbjct: 68 RIMAKRGPFLVIQDVSG-----RIQAY-AEKGVQADLKDRYQGLDIGDIIGVTGQLHLSG 121
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE +YR RY+DLI+NE +R+ F R+++++
Sbjct: 122 KGDLYVNMEEYQLLTKALRPLPEKFHGLTDQETRYRQRYVDLIVNEESRQAFVMRSKVVA 181
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM K +FMEVETP++H PGGA A+PFITHHN+L+M M+LRIAPELYLKRL++GGF
Sbjct: 182 AIRNFMIKKEFMEVETPMMHVIPGGASARPFITHHNALDMPMYLRIAPELYLKRLVVGGF 241
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
++FEIN+NFRNEG+SPRHNPEFTM+EFY AY +Y LM TE+++ I ++ +G+ ++
Sbjct: 242 ERVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSIAIELLGSAQMP 301
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y +DF + +L+++EAI+KY P I +++ F++ + K +
Sbjct: 302 YGEHTVDFGGPYARLSMLEAIQKYNPDNATIQAMTYEQVKDLEFMRELAISLGIKIEKFW 361
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E +L PT+IT YP +ISPLAR+ N +N+ IT+RFE FI G
Sbjct: 362 TCGQLLEEI-----FGETAEWQLMQPTFITGYPADISPLARR-NDDNHFITDRFEFFIGG 415
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND E+Q RFK Q+D K+ + E + +YD DYI ALE+G+PP +G GIG+
Sbjct: 416 REVANGFSELNDAEDQDSRFKAQVDAKDAGDDE-AMFYDADYITALEHGLPPTAGQGIGI 474
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL+ML TN+ IRDVILFP +R
Sbjct: 475 DRLVMLFTNTHTIRDVILFPAMR 497
>gi|113969171|ref|YP_732964.1| lysyl-tRNA synthetase [Shewanella sp. MR-4]
gi|114048687|ref|YP_739237.1| lysyl-tRNA synthetase [Shewanella sp. MR-7]
gi|117921734|ref|YP_870926.1| lysyl-tRNA synthetase [Shewanella sp. ANA-3]
gi|123029921|sp|Q0HM10.1|SYK_SHESM RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|123030336|sp|Q0HRS5.1|SYK_SHESR RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|166229829|sp|A0L0F1.1|SYK_SHESA RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|113883855|gb|ABI37907.1| lysyl-tRNA synthetase [Shewanella sp. MR-4]
gi|113890129|gb|ABI44180.1| lysyl-tRNA synthetase [Shewanella sp. MR-7]
gi|117614066|gb|ABK49520.1| lysyl-tRNA synthetase [Shewanella sp. ANA-3]
Length = 500
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 215/443 (48%), Positives = 308/443 (69%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
R+M K F+++QD SG +IQ Y + + + +L ++ DIGDIIG G L +
Sbjct: 68 RIMAKRGPFLVIQDVSG-----RIQAY-AEKGVQADLKDRYQGLDIGDIIGVTGQLHLSG 121
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE +YR RY+DLI+NE +R+ F R+++++
Sbjct: 122 KGDLYVNMEEYQLLTKALRPLPEKFHGLTDQETRYRQRYVDLIVNEESRQAFVMRSKVVA 181
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM K +FMEVETP++H PGGA A+PFITHHN+L+M M+LRIAPELYLKRL++GGF
Sbjct: 182 AIRNFMIKKEFMEVETPMMHVIPGGASARPFITHHNALDMPMYLRIAPELYLKRLVVGGF 241
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
++FEIN+NFRNEG+SPRHNPEFTM+EFY AY +Y LM TE+++ I ++ +G+ ++
Sbjct: 242 ERVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSIAIELLGSAQMP 301
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y +DF + +L+++EAI+KY P I +++ F++ + K +
Sbjct: 302 YGEHTVDFGGPYARLSMLEAIQKYNPDNATIQAMTYEQVKDLEFMRELAISLGIKIEKFW 361
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E +L PT+IT YP +ISPLAR+ N +N+ IT+RFE FI G
Sbjct: 362 TCGQLLEEI-----FGETAEWQLMQPTFITGYPADISPLARR-NDDNHFITDRFEFFIGG 415
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND E+Q RFK Q+D K+ + E + +YD DYI ALE+G+PP +G GIG+
Sbjct: 416 REVANGFSELNDAEDQDSRFKAQVDAKDAGDDE-AMFYDADYITALEHGLPPTAGQGIGI 474
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL+ML TN+ IRDVILFP +R
Sbjct: 475 DRLVMLFTNTHTIRDVILFPAMR 497
>gi|347359867|ref|YP_387861.2| lysyl-tRNA synthetase [Desulfovibrio alaskensis G20]
gi|342906402|gb|ABB38166.2| Lysyl-tRNA synthetase [Desulfovibrio alaskensis G20]
Length = 527
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 215/446 (48%), Positives = 313/446 (70%), Gaps = 24/446 (5%)
Query: 3 KRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
+R GK++F L D SG K+Q Y S + +G + Y+ FK +DIGDI+G GTLF+T
Sbjct: 100 QRSFGKVTFFHLLDKSG-----KMQCYASRDSLGADAYSVFKKFDIGDIVGVCGTLFRTK 154
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
TGEL+I+ SS++L+TKS+RPLP K+ L + E +YR RY+DLI+ TR++F+KR QI+
Sbjct: 155 TGELTIQCSSVQLLTKSIRPLPEKYHGLKDVETRYRQRYVDLIVTPRTREIFRKRGQIVR 214
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
R+FME+ FMEVETP++ PGGA AKPF+THHN+L+M++++RIAPELYLKRL++GGF
Sbjct: 215 EFRNFMEERGFMEVETPMMQPIPGGATAKPFVTHHNALDMQLYMRIAPELYLKRLLVGGF 274
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
K+FEIN+NFRNEGIS +HNPEFTM EFY AY + LM TE++ ++ G+T I
Sbjct: 275 EKVFEINRNFRNEGISTQHNPEFTMCEFYWAYARFEDLMDLTEQLFSRLAQKVCGSTVIT 334
Query: 243 YQGRLLDFSKS-FEKLTIIEAIKK---YTPQYNEIDLQNKLFLKSELKKINPKFNQK--K 296
YQG+ +D + ++++T ++++K + P++ ++ +K++ ++ K
Sbjct: 335 YQGQEVDLTPGKWQRMTFHDSLEKVGGHAPEFY-----------NDYEKLSAYIRERGEK 383
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
++ K LQ LF+ E KL P +I +YPT+ISPL+R+ N +N ++T+RFELFI G
Sbjct: 384 VIEGEKLGKLQAKLFDLDVEYKLIQPHFIYHYPTDISPLSRR-NDDNPDVTDRFELFITG 442
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+AN FSELNDP +Q RF +Q+ K E + + + D DY+ ALEYGMPPA+G G+G+
Sbjct: 443 RELANAFSELNDPVDQRKRFDDQVAEK-EAGDDEAHFMDEDYLRALEYGMPPAAGQGVGI 501
Query: 417 DRLIMLLTNSKNIRDVILFPHLRNEN 442
DRL+MLLT+S +IR+VILFP L+ E+
Sbjct: 502 DRLVMLLTDSASIREVILFPLLKLES 527
>gi|51245481|ref|YP_065365.1| lysyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
gi|50876518|emb|CAG36358.1| probable lysyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
Length = 503
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 218/445 (48%), Positives = 299/445 (67%), Gaps = 19/445 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M R GK +F + D +G ++Q+YI ++IG+ ++ FK +DIGDI+G KG LFK
Sbjct: 65 MAMRKFGKAAFFQVMDKTG-----RVQIYIKKDVIGEEIFAQFKKWDIGDIVGIKGHLFK 119
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T GELSI SS+++I+KSLRPLP+K+ LS+ E +YR RY+DLI+ +R+VF+KR +I
Sbjct: 120 TKVGELSIAASSVQMISKSLRPLPDKWHGLSDVETRYRQRYVDLIVTPESREVFRKRGEI 179
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I IR F+ FMEVETP++ PGGA AKPF THHN+L+M ++LR+APELYLKRL++G
Sbjct: 180 IRHIRDFLSDRGFMEVETPMMQAVPGGATAKPFKTHHNALDMDLYLRVAPELYLKRLLVG 239
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN+NFRNEG+S RHNPEFTM+EFY AY Y +M TE+M+ G+ +
Sbjct: 240 GLERVFEINRNFRNEGLSTRHNPEFTMLEFYQAYATYEDMMDITEEMVSTACEKVNGSMQ 299
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI--DLQNKLFLKSELK-KINPKFNQKKI 297
I YQG ++ + ++++T+ E++ K EI D + + L E ++ K
Sbjct: 300 IQYQGTDVNLAPPWQRMTMQESLTKVAGIAPEIMADAEATIALAKEKGIRLEETAGHGKA 359
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
+ LFE E KL +PT+IT+YPTE+SPLAR+ N E+ + T+RFELFI G
Sbjct: 360 MTE---------LFELLVEEKLIDPTFITSYPTEVSPLARR-NDEDPSTTDRFELFITGR 409
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
E+AN FSELNDP +Q RF QI + + + E+ D DYI ALEYGMP A+G GIG+D
Sbjct: 410 ELANAFSELNDPVDQYQRFAKQIAERGD-DEEIHPELDHDYIRALEYGMPSAAGEGIGID 468
Query: 418 RLIMLLTNSKNIRDVILFPHLRNEN 442
RL MLLT+S +IRDVI FPHL+ E
Sbjct: 469 RLTMLLTDSPSIRDVIFFPHLKAET 493
>gi|421075863|ref|ZP_15536867.1| Lysyl-tRNA synthetase [Pelosinus fermentans JBW45]
gi|392525975|gb|EIW49097.1| Lysyl-tRNA synthetase [Pelosinus fermentans JBW45]
Length = 497
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 216/440 (49%), Positives = 304/440 (69%), Gaps = 13/440 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M R GK SF+ L D SG K+Q Y +++G+ Y FK DIGDIIG +G +FK
Sbjct: 69 MAVRGHGKTSFVHLMDMSG-----KVQAYFRQDVVGEVEYDKFKLLDIGDIIGIEGVIFK 123
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T GE+S+K +S +++ KSLRPLP K+ L + E +YR RY+DLI+N R F R++I
Sbjct: 124 TQRGEISLKATSFEILAKSLRPLPEKWHGLKDVETRYRQRYLDLIVNPEVRNTFVTRSKI 183
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I S+R ++K D++EVETP++H GGA A+PF+THHN+L+M +FLRIAPELYLKRLI+G
Sbjct: 184 IKSLRSILDKRDYLEVETPMMHPIAGGAAARPFVTHHNALDMDLFLRIAPELYLKRLIVG 243
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF +++E+ + FRNEGIS RHNPEFT++E Y AY++Y LM+ TE ++ I ++ +GTT+
Sbjct: 244 GFERVYEVGRVFRNEGISVRHNPEFTIVELYQAYSDYQDLMRLTEDVVSGIALEVLGTTQ 303
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQG+ ++ + + +LT+ EA+KKYT ++D L+ E + I K K N
Sbjct: 304 ITYQGQEINLAPPWNRLTMTEAVKKYT----DVDFDTVATLE-EARAIADKLGVKYESKN 358
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
IL +FEE E L PT+I +PTEISPLA++ N EN IT+RFE+F+ E+A
Sbjct: 359 GIGGILN-NVFEEKVEEHLIQPTFIIGHPTEISPLAKR-NKENPEITDRFEVFVFARELA 416
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDP +Q RF +Q++ + + E + D DY++ALEYG+PP G GIG+DRL+
Sbjct: 417 NGFSELNDPIDQEGRFASQVEQRESGDDE-AHMMDHDYVNALEYGLPPTGGLGIGIDRLV 475
Query: 421 MLLTNSKNIRDVILFPHLRN 440
MLLT+S +IRDV+LFPH+R+
Sbjct: 476 MLLTDSPSIRDVLLFPHMRH 495
>gi|307546433|ref|YP_003898912.1| lysyl-tRNA synthetase [Halomonas elongata DSM 2581]
gi|307218457|emb|CBV43727.1| lysyl-tRNA synthetase [Halomonas elongata DSM 2581]
Length = 517
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 213/450 (47%), Positives = 305/450 (67%), Gaps = 27/450 (6%)
Query: 5 VMGKI-----SFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLF 59
V G+I FI++QD SG +IQLY+ + + D K +DIGDI+ +G +
Sbjct: 76 VAGRILRKRGPFIVIQDASG-----QIQLYVDKKGLPAETLEDIKGWDIGDIVAGRGPVH 130
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
K+ G+L + + +L+TKSLRPLP+KF L++ E +YR RY+DLI+N ++R+VF+ R
Sbjct: 131 KSGKGDLYVMMEEARLLTKSLRPLPDKFHGLTDMEARYRQRYVDLIMNPDSRRVFETRAG 190
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+IS++R F E + FMEVETP+L PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 191 VISAMRRFFEDHGFMEVETPMLQPIPGGATARPFITHHNALDIDMYLRIAPELYLKRLVV 250
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF K+FEIN+NFRNEG+S RHNPEFTM+E+Y AY +Y LM FTE M++ + + +G T
Sbjct: 251 GGFEKVFEINRNFRNEGLSTRHNPEFTMVEYYQAYADYQDLMDFTEAMLRTVTREVLGDT 310
Query: 240 KI-----DYQGRLL-----DFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKIN 289
+ D +G +L DF K FE+L++ +AI Y P L ++ + ++++
Sbjct: 311 TVVSTVRDSEGEVLETFEYDFGKPFERLSVFDAILAYNPDITAEALADEAAARQIAERLD 370
Query: 290 PKFNQKKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITER 349
L +Q+ +FE+T E +L PT+I +YPTE+SPLAR+ + + +TER
Sbjct: 371 IDVKDGWGLGK-----VQIEIFEKTVEHRLQQPTFIIDYPTEVSPLARRKDT-DPFVTER 424
Query: 350 FELFIIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPA 409
FE F+ G E+ANGFSELND E+Q+ RF Q K+ + E + YYD DY+ ALEYG+PP
Sbjct: 425 FEFFVGGRELANGFSELNDAEDQAERFAAQAAEKDAGDQE-AMYYDADYVRALEYGLPPT 483
Query: 410 SGCGIGVDRLIMLLTNSKNIRDVILFPHLR 439
+G GIG+DRL+MLLT+S +IRDV+LFP +R
Sbjct: 484 AGEGIGIDRLVMLLTDSASIRDVLLFPAMR 513
>gi|21672688|ref|NP_660755.1| lysyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
graminum)]
gi|25009350|sp|Q8K9C5.1|SYK_BUCAP RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|21623328|gb|AAM67966.1| lysyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
graminum)]
Length = 503
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 240/447 (53%), Positives = 315/447 (70%), Gaps = 31/447 (6%)
Query: 3 KRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLFKT 61
+R+MGK SF LQD G KIQ+Y + I + Y + FK +DIGDI+G +G LFKT
Sbjct: 74 RRIMGKASFFTLQDMEG-----KIQIYTREKEITSDFYNNHFKKWDIGDILGIEGILFKT 128
Query: 62 NTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQII 121
TGELSI LK++TKSLRPLP+KF LSNQE +YR RY+DLI N +FK R++II
Sbjct: 129 KTGELSIFSKKLKILTKSLRPLPDKFHGLSNQEKRYRKRYLDLISNNQLFNIFKNRSKII 188
Query: 122 SSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGG 181
IR+FM +N+F+EVETP+LHN PGGA A+PFIT+HN +N +M+LRIAPELYLK+LI+GG
Sbjct: 189 RFIRNFMIENNFLEVETPMLHNIPGGANARPFITYHNEINEEMYLRIAPELYLKQLIVGG 248
Query: 182 FNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKI 241
F +IFE+N+NFRNEG+S RHNPEFTM+E Y AY+NY +M FTE ++K II G ++I
Sbjct: 249 FERIFELNRNFRNEGVSARHNPEFTMMEAYIAYSNYEDMMNFTENLLKNIIKSICGKSEI 308
Query: 242 DYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNNL 301
Y L+F+ F+KLT+ E+I ++ DL+N L+KI KKI NN+
Sbjct: 309 KYNKYYLNFNIPFKKLTMKESILQFNSNICLSDLKN-------LQKI------KKIANNI 355
Query: 302 KKDI--------LQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELF 353
+I ++ +FE+T E L PT+IT YP E+SPLAR+++ N+N+T+RFELF
Sbjct: 356 GIEIKDNWNIGYIENEIFEKTVEKNLIQPTFITEYPVEVSPLARRNDF-NSNVTDRFELF 414
Query: 354 IIGNEIANGFSELNDPEEQSVRFKNQIDL-KNEINGELSSYYDTDYIHALEYGMPPASGC 412
I G EI NGFSELND E+Q RF NQ+ + + E N ++ YD +YI AL+YG+PP SG
Sbjct: 415 IAGYEIGNGFSELNDSEDQKNRFLNQMKIAEKEKNKDM--LYDENYIEALKYGLPPTSGL 472
Query: 413 GIGVDRLIMLLTNSKNIRDVILFPHLR 439
GIG+DRLIM+LTN +IRDVILFP LR
Sbjct: 473 GIGIDRLIMILTNQISIRDVILFPTLR 499
>gi|145633058|ref|ZP_01788790.1| lysyl-tRNA synthetase [Haemophilus influenzae 3655]
gi|144986284|gb|EDJ92863.1| lysyl-tRNA synthetase [Haemophilus influenzae 3655]
Length = 502
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 216/443 (48%), Positives = 309/443 (69%), Gaps = 15/443 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYT-DFKNYDIGDIIGAKGTLF 59
M +R MGK +FI +QD SG KIQLY++ + + + +Y D N+D+GDIIG KGTLF
Sbjct: 71 MTRRAMGKATFITIQDMSG-----KIQLYVARDNLPEGVYAEDVGNWDLGDIIGVKGTLF 125
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL+IK + ++L+TK+LRPLP+KF L++QE++YR RY+DLI NE +R+ F R++
Sbjct: 126 KTKTNELTIKTTEVQLLTKALRPLPDKFHGLTDQEVRYRQRYLDLISNEESRRTFIIRSK 185
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR + FMEVETP+L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 186 VVAGIREYFISKGFMEVETPMLQVIPGGASARPFVTHHNALDVDMYLRIAPELYLKRLVV 245
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTM+E+Y AY +Y LM TE++++K+ +D +GTT
Sbjct: 246 GGFERVFELNRNFRNEGVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTT 305
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI--DLQNKLFLKSELKKINPKFNQKKI 297
+ Y DF K FE++T+ +A KY + DL + K+ +++ + +
Sbjct: 306 IVKYGEYEFDFGKPFERITLHDATVKYGADKGIVKEDLYDFDRAKATAERLGIEVQKSWG 365
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L ++ I FEE E L PT++ +P EISPLAR+ N EN ++T+RFELFI G
Sbjct: 366 LGSIVNAI-----FEEVAEHHLIQPTFLMAHPAEISPLARR-NDENPDVTDRFELFIGGR 419
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND E+Q+ RF Q+ K E + + + D D++ ALE+G+PP +G G+G+D
Sbjct: 420 EIGNGFSELNDAEDQNERFDAQVAAK-EAGDDEAMFKDEDFVVALEHGLPPTAGEGLGID 478
Query: 418 RLIMLLTNSKNIRDVILFPHLRN 440
RL ML N+ +IRDVILFP +R
Sbjct: 479 RLAMLYANAPSIRDVILFPAMRQ 501
>gi|392552234|ref|ZP_10299371.1| lysyl-tRNA ligase [Pseudoalteromonas spongiae UST010723-006]
Length = 513
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 225/453 (49%), Positives = 309/453 (68%), Gaps = 28/453 (6%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
R++ K F++LQD G+IQ Y S ++ K+L + DIGDIIG G L K+
Sbjct: 68 RILAKRGPFLVLQDM-----KGRIQAYASKDV-QKDLKEKYGQLDIGDIIGVSGPLHKSG 121
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TKSLRPLP KF L++QE KYR RY+DLI N +TR+ F+ R+++I
Sbjct: 122 KGDLYVDMVQYELLTKSLRPLPEKFHGLTDQEAKYRQRYVDLITNMDTRETFRIRSKVIE 181
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
IR F+ + DFMEVETP+L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++GGF
Sbjct: 182 GIRRFLAERDFMEVETPMLQVIPGGATARPFVTHHNALDIDMYLRIAPELYLKRLVVGGF 241
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKI- 241
+++FEIN+NFRNEG+S RHNPEFTMIEFY AY +Y LM TE M++ + D +GTT +
Sbjct: 242 DRVFEINRNFRNEGLSTRHNPEFTMIEFYQAYADYNDLMNLTEDMLRTVAQDVLGTTTVI 301
Query: 242 ----DYQGRLL-----DFSKSFEKLTIIEAIKKYTPQYNEI-----DLQNKLF-LKSELK 286
+ +G ++ DF FE+L++ +AI K+ P EI D +N L + K
Sbjct: 302 NTVKNAEGEVVETIEYDFGSKFERLSMADAIIKFGPDAAEIAHIFKDPENHFDELVAYAK 361
Query: 287 KINPKFNQKKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNI 346
K++ K +K + K +FEET E KL PT+IT YP E+SPLAR+ N EN I
Sbjct: 362 KVHVKVPEKCVWGAGK---FLCEIFEETAEHKLIQPTFITEYPWEVSPLARR-NDENPFI 417
Query: 347 TERFELFIIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGM 406
T+RFE F+ G E+ANGFSELND E+Q+ RF Q++ K+ + E + ++D DYI ALEYG+
Sbjct: 418 TDRFEFFVGGRELANGFSELNDAEDQAARFARQVEEKDAGDDE-AMHFDDDYIQALEYGL 476
Query: 407 PPASGCGIGVDRLIMLLTNSKNIRDVILFPHLR 439
PP +G GIG+DRL+ML T+S I+DVILFPH+R
Sbjct: 477 PPTAGEGIGIDRLVMLFTDSPTIKDVILFPHMR 509
>gi|436839763|ref|YP_007324141.1| lysyl-tRNA synthetase [Desulfovibrio hydrothermalis AM13 = DSM
14728]
gi|432168669|emb|CCO22035.1| lysyl-tRNA synthetase [Desulfovibrio hydrothermalis AM13 = DSM
14728]
Length = 531
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 221/443 (49%), Positives = 308/443 (69%), Gaps = 22/443 (4%)
Query: 4 RVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTNT 63
R GK++F LQD +G ++Q+Y++ + +G +LY FK +DIGDI+G +G LF+T T
Sbjct: 98 RSFGKVAFFHLQDPTG-----RVQVYVARDDLGPDLYKIFKKFDIGDIVGVEGELFRTKT 152
Query: 64 GELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIISS 123
EL++K + LITKS+RPLP K+ L + E +YR RY+DLI+ R++F+KRT+I+ +
Sbjct: 153 DELTLKAYKVDLITKSMRPLPEKYHGLKDVETRYRQRYVDLIVTPKAREIFQKRTKIVRA 212
Query: 124 IRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGFN 183
+R++++ FMEVETP++ PGGA A+PF THHN+L+MK++LRIAPELYLKRL++GGF
Sbjct: 213 LRNYLDNKGFMEVETPMMQPIPGGAAARPFETHHNALDMKLYLRIAPELYLKRLLVGGFE 272
Query: 184 KIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKIDY 243
K++EIN+NFRNEGIS RHNPEFTM+EFY AY N+ LM TE MI + D G TKI+Y
Sbjct: 273 KVYEINRNFRNEGISIRHNPEFTMLEFYWAYANFEDLMDLTEDMISSVCKDVNGDTKIEY 332
Query: 244 QGRLLDFSK-SFEKLTI---IEAIKKYTPQ-YNEIDLQNKLFLKSELKKINPKFNQKKIL 298
QG +D + ++ ++ +E I P+ Y + D +L +KK+ K + + L
Sbjct: 333 QGEKIDLTPGAWHRVAFHESLETIGNVAPEIYEDYDKCKEL-----VKKLGEKAVEGEKL 387
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ LF+ E KL P +I +YPT+ISPL+R+ N EN +IT+RFELFI G E
Sbjct: 388 GK-----LQAKLFDLLVEPKLMQPHFIYHYPTDISPLSRR-NEENPDITDRFELFIYGRE 441
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
+AN FSELNDP +Q RF Q+ K+ + E + + D DY+ ALEYGMPPA+G GIG+DR
Sbjct: 442 LANAFSELNDPVDQRCRFMEQVAEKDAGDDE-AHHMDEDYVRALEYGMPPAAGQGIGIDR 500
Query: 419 LIMLLTNSKNIRDVILFPHLRNE 441
L+MLLT+S +IR+VILFP LR E
Sbjct: 501 LVMLLTDSASIREVILFPLLRAE 523
>gi|114776308|ref|ZP_01451353.1| Lysyl-tRNA synthetase class II [Mariprofundus ferrooxydans PV-1]
gi|114553138|gb|EAU55536.1| Lysyl-tRNA synthetase class II [Mariprofundus ferrooxydans PV-1]
Length = 509
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 207/442 (46%), Positives = 307/442 (69%), Gaps = 12/442 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M RVMGK SF+ LQD SG +IQL+++ +++G ++Y + +D+GDIIGA+GTLF+
Sbjct: 80 MAHRVMGKSSFVKLQDGSG-----QIQLFLNRDVLGADVYNPTRKWDLGDIIGAEGTLFR 134
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T GELSI+V+ ++ ++K LRPLP K+ LS+ E +YR RY+DL++ +R F++R++I
Sbjct: 135 TRAGELSIRVTHIETVSKCLRPLPEKWHGLSDVETRYRQRYVDLMVTPESRDTFRQRSRI 194
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+S +R +E+ F+EVETP+L + GGA A+PF THHN+LNM++FLRIAPELYLKRL++G
Sbjct: 195 VSLLRQGLEERGFIEVETPMLQPEAGGAAARPFSTHHNALNMELFLRIAPELYLKRLLVG 254
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FE+N+NFRNEG HNPEFTM+EFY AY ++ M TE +++ I +G +
Sbjct: 255 GFERVFEMNRNFRNEGSDATHNPEFTMVEFYQAYADFNDAMDTTEGLMRSIAT-TLGCEQ 313
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
++++G ++ ++ F+++ + E++ P +K L + ++ P F K L
Sbjct: 314 VEWEGVDINLTQPFKRVRLDESVFDRRPDLRG-HANDKALLATVCMQVIPDF---KPLIT 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
K L LFEE E +L PT+IT+YP ++SPLAR+SN ++ +T+RFELF+ G E+A
Sbjct: 370 WKAGHYLLALFEELVEPELLQPTFITHYPVDVSPLARRSN-DDATVTDRFELFVAGREMA 428
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDP++Q R Q K + E +S D D++ ALE+GMPPA+G GIGVDRL+
Sbjct: 429 NGFSELNDPDDQRGRLVAQAQAKAAGDAE-ASGVDEDFLRALEFGMPPAAGVGIGVDRLV 487
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
M+LT +IRDV+LFPH+R E
Sbjct: 488 MMLTGQHSIRDVLLFPHMRPEQ 509
>gi|332288941|ref|YP_004419793.1| lysyl-tRNA synthetase [Gallibacterium anatis UMN179]
gi|330431837|gb|AEC16896.1| lysyl-tRNA synthetase [Gallibacterium anatis UMN179]
Length = 502
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 218/443 (49%), Positives = 312/443 (70%), Gaps = 15/443 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R MGK SFI LQD SG KIQLY++ +++ + +Y + D+GDI+GAKGTLF
Sbjct: 70 MTRRKMGKASFITLQDMSG-----KIQLYVARDLLPEGVYEEIMAMLDLGDIVGAKGTLF 124
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL+++ ++L+L+TK+LRPLP+KF L++QE++YR RY+DLI NE +R+ F R++
Sbjct: 125 KTKTNELTVRCTALELLTKALRPLPDKFHGLADQEMRYRQRYLDLISNEESRRTFIIRSK 184
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+I+ IR + F+EVETP+L PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 185 VIAGIREYFIGKGFIEVETPMLQVIPGGAAARPFITHHNALDIDMYLRIAPELYLKRLVV 244
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTMIE+Y AY +Y LM TE++++K+ +D +GTT
Sbjct: 245 GGFERVFELNRNFRNEGVSVRHNPEFTMIEYYQAYADYHDLMDNTEELLRKLALDILGTT 304
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI--DLQNKLFLKSELKKINPKFNQKKI 297
+ Y DF K FE++T+ +A+ KY + DL + K+ +K+ + +
Sbjct: 305 IVPYGEYEFDFGKPFERITMHDAVLKYGADKGIVKEDLYDFDRAKAVAEKLGIEIQKSWG 364
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L +L I FEE E L PT++ +P EISPLAR+ N EN +T+RFELFI G
Sbjct: 365 LGSLVNAI-----FEEVAEHHLIQPTFLMAHPAEISPLARR-NDENPEVTDRFELFIGGR 418
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND E+Q+ RF Q+ K E + + + D D++ ALE+G+PP +G G+G+D
Sbjct: 419 EIGNGFSELNDAEDQNERFNAQVAAK-EAGDDEAMFKDEDFVVALEHGLPPTAGEGLGID 477
Query: 418 RLIMLLTNSKNIRDVILFPHLRN 440
RL ML N+++IRDVILFP +++
Sbjct: 478 RLAMLFANAESIRDVILFPAMKH 500
>gi|24372578|ref|NP_716620.1| lysyl-tRNA synthetase LysS [Shewanella oneidensis MR-1]
gi|39932202|sp|Q8EI58.1|SYK_SHEON RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|24346596|gb|AAN54065.1| lysyl-tRNA synthetase LysS [Shewanella oneidensis MR-1]
Length = 500
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 214/443 (48%), Positives = 308/443 (69%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
R+M K F+++QD SG +IQ Y + + + +L ++ DIGDIIG G L +
Sbjct: 68 RIMAKRGPFLVIQDVSG-----RIQAY-AEKGVQADLKDRYQGLDIGDIIGVTGQLHLSG 121
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE +YR RY+DLI+NE +R+ F R+++++
Sbjct: 122 KGDLYVNMEEYQLLTKALRPLPEKFHGLTDQETRYRQRYVDLIVNEESRQAFVMRSKVVA 181
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM K +FMEVETP++H PGGA A+PFITHHN+L+M M+LRIAPELYLKRL++GGF
Sbjct: 182 AIRNFMIKKEFMEVETPMMHVIPGGASARPFITHHNALDMPMYLRIAPELYLKRLVVGGF 241
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
++FEIN+NFRNEG+SPRHNPEFTM+EFY AY +Y LM TE+++ I ++ +G+ ++
Sbjct: 242 ERVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYQDLMDLTEELLSSIAIELLGSAQMP 301
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y +DF + +L+++EAI+KY P I +++ F++ + K +
Sbjct: 302 YGEHTVDFGGPYARLSMLEAIQKYNPDNATIQAMTYEQVKDLEFMRELAISLGIKIEKFW 361
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E +L PT+IT YP +ISPLAR+ N +N+ IT+RFE FI G
Sbjct: 362 TCGQLLEEI-----FGETAEWQLMQPTFITGYPADISPLARR-NDDNHFITDRFEFFIGG 415
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND ++Q RFK Q+D K+ + E + +YD DYI ALE+G+PP +G GIG+
Sbjct: 416 REVANGFSELNDAQDQDSRFKAQVDAKDAGDDE-AMFYDADYITALEHGLPPTAGQGIGI 474
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL+ML TN+ IRDVILFP +R
Sbjct: 475 DRLVMLFTNTHTIRDVILFPAMR 497
>gi|392549204|ref|ZP_10296341.1| lysyl-tRNA ligase [Pseudoalteromonas rubra ATCC 29570]
Length = 513
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 226/453 (49%), Positives = 307/453 (67%), Gaps = 28/453 (6%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
R++ K F++LQD G+IQ Y S ++ K L + DIGDIIG G L K+
Sbjct: 68 RILAKRGPFLVLQDM-----KGRIQAYASKDV-QKELKAKYGQLDIGDIIGVSGPLHKSG 121
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TKSLRPLP KF L++QE KYR RY+DLI N TR+ F+ R+++I
Sbjct: 122 KGDLYVDMVQYELLTKSLRPLPEKFHGLTDQEAKYRQRYVDLITNMETRETFRIRSKVIE 181
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
IR F+ + DFMEVETP+L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++GGF
Sbjct: 182 GIRRFLAERDFMEVETPMLQVIPGGATARPFVTHHNALDIDMYLRIAPELYLKRLVVGGF 241
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKI- 241
+++FEIN+NFRNEG+S RHNPEFTMIEFY AY +Y LM TE M++ + D +GTT +
Sbjct: 242 DRVFEINRNFRNEGLSTRHNPEFTMIEFYQAYADYKDLMNLTEDMLRTVAQDVLGTTIVT 301
Query: 242 ----DYQGRLL-----DFSKSFEKLTIIEAIKKYTPQYNEI-----DLQNKL-FLKSELK 286
+ +G +L DF K+FE+L++ +AI KY P D +N L + K
Sbjct: 302 NTVKNAEGEVLETIEYDFGKAFERLSMADAIIKYGPDAEASAHIFKDPENHFDELVAYAK 361
Query: 287 KINPKFNQKKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNI 346
K++ K +K + K +FEET E KL PT+IT YP E+SPLAR+ N EN I
Sbjct: 362 KVHVKIPEKCVWGAGK---FLCEIFEETAEHKLIQPTFITEYPWEVSPLARR-NDENPFI 417
Query: 347 TERFELFIIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGM 406
T+RFE F+ G E+ANGFSELND E+Q+ RF Q++ K+ + E + ++D DYI ALEYG+
Sbjct: 418 TDRFEFFVGGRELANGFSELNDAEDQAARFARQVEEKDAGDDE-AMHFDDDYIRALEYGL 476
Query: 407 PPASGCGIGVDRLIMLLTNSKNIRDVILFPHLR 439
PP +G GIG+DRL+ML T+S I+DVILFPH+R
Sbjct: 477 PPTAGEGIGIDRLVMLFTDSPTIKDVILFPHMR 509
>gi|148826181|ref|YP_001290934.1| lysyl-tRNA synthetase [Haemophilus influenzae PittEE]
gi|229559858|sp|A5UCQ0.1|SYK_HAEIE RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|148716341|gb|ABQ98551.1| lysyl-tRNA synthetase [Haemophilus influenzae PittEE]
Length = 502
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 216/443 (48%), Positives = 308/443 (69%), Gaps = 15/443 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYT-DFKNYDIGDIIGAKGTLF 59
M +R MGK +FI +QD SG KIQLY++ + + + +Y D N+D+GDIIG KGTLF
Sbjct: 71 MTRRAMGKATFITIQDMSG-----KIQLYVARDNLPEGVYAEDVGNWDLGDIIGVKGTLF 125
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL+IK + ++L+TK+LRPLP+KF L++QE++YR RY+DLI NE +R+ F R++
Sbjct: 126 KTKTNELTIKTTEVQLLTKALRPLPDKFHGLTDQEVRYRQRYLDLISNEESRRTFIIRSK 185
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR + FMEVETP+L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 186 VVAGIREYFISKGFMEVETPMLQVIPGGASARPFVTHHNALDVDMYLRIAPELYLKRLVV 245
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTM+E+Y AY +Y LM TE++++K+ +D +GTT
Sbjct: 246 GGFERVFELNRNFRNEGVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTT 305
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI--DLQNKLFLKSELKKINPKFNQKKI 297
+ Y DF K FE++T+ +A KY + DL + K+ +++ + +
Sbjct: 306 IVKYGDLEFDFGKPFERITLHDATVKYGADKGIVKEDLYDFDRAKATAERLGIEVQKSWG 365
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L ++ I FEE E L PT++ +P EISPLAR+ N EN +T+RFELFI G
Sbjct: 366 LGSIVNAI-----FEEVAEHHLIQPTFLMAHPAEISPLARR-NDENPEVTDRFELFIGGR 419
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND E+Q+ RF Q+ K E + + + D D++ ALE+G+PP +G G+G+D
Sbjct: 420 EIGNGFSELNDAEDQNERFDAQVAAK-EAGDDEAMFKDEDFVVALEHGLPPTAGEGLGID 478
Query: 418 RLIMLLTNSKNIRDVILFPHLRN 440
RL ML N+ +IRDVILFP +R
Sbjct: 479 RLAMLYANAPSIRDVILFPAMRQ 501
>gi|336310044|ref|ZP_08565017.1| lysyl-tRNA synthetase (class 2) [Shewanella sp. HN-41]
gi|335866604|gb|EGM71582.1| lysyl-tRNA synthetase (class 2) [Shewanella sp. HN-41]
Length = 500
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 214/443 (48%), Positives = 308/443 (69%), Gaps = 20/443 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
R+M K F+++QD SG +IQ Y + + + +L ++ DIGDIIG G L +
Sbjct: 68 RIMAKRGPFLVIQDVSG-----RIQAY-AEKGVQADLKDRYQGLDIGDIIGVTGQLHLSG 121
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TK+LRPLP KF L++QE +YR RY+DLI+NE +R+ F R+++++
Sbjct: 122 KGDLYVNMEEYQLLTKALRPLPEKFHGLTDQETRYRQRYVDLIVNEESRQAFVMRSKVVA 181
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR+FM K +FMEVETP++H PGGA A+PFITHHN+L+M M+LRIAPELYLKRL++GGF
Sbjct: 182 AIRNFMIKKEFMEVETPMMHVIPGGASARPFITHHNALDMPMYLRIAPELYLKRLVVGGF 241
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
++FEIN+NFRNEG+SPRHNPEFTM+EFY AY +Y LM TE+++ I ++ +G+ ++
Sbjct: 242 ERVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSIAIELLGSAQMP 301
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y +DF + +L+++EAI+KY P I +++ F++ + K +
Sbjct: 302 YGEHTVDFGGPYARLSMLEAIQKYNPDNATIQAMTYEQVKDLEFMRELAISLGIKIEKFW 361
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E +L PT+IT YP +ISPLAR+ N +N+ IT+RFE FI G
Sbjct: 362 TCGQLLEEI-----FGETAEWQLMQPTFITGYPADISPLARR-NDDNHFITDRFEFFIGG 415
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND ++Q RFK Q+D K+ + E + +YD DYI ALE+G+PP +G GIG+
Sbjct: 416 REVANGFSELNDAQDQDSRFKAQVDAKDAGDDE-AMFYDADYITALEHGLPPTAGQGIGI 474
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL+ML TN+ IRDVILFP +R
Sbjct: 475 DRLVMLFTNTHTIRDVILFPAMR 497
>gi|309751146|gb|ADO81130.1| Lysyl-tRNA synthetase [Haemophilus influenzae R2866]
Length = 502
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 216/443 (48%), Positives = 309/443 (69%), Gaps = 15/443 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYT-DFKNYDIGDIIGAKGTLF 59
M +R MGK +FI +QD SG KIQLY++ + + + +Y D N+D+GDIIG KGTLF
Sbjct: 71 MTRRAMGKATFITIQDMSG-----KIQLYVARDNLPEGVYAEDVGNWDLGDIIGVKGTLF 125
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL+IK + ++L+TK+LRPLP+KF L++QE++YR RY+DLI NE +R+ F R++
Sbjct: 126 KTKTNELTIKTTEVQLLTKALRPLPDKFHGLTDQEVRYRQRYLDLISNEESRRTFIIRSK 185
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR + FMEVETP+L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 186 VVAGIREYFISKGFMEVETPMLQVIPGGASARPFVTHHNALDVDMYLRIAPELYLKRLVV 245
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTM+E+Y AY +Y LM TE++++K+ +D +GTT
Sbjct: 246 GGFERVFELNRNFRNEGVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTT 305
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI--DLQNKLFLKSELKKINPKFNQKKI 297
+ Y DF K FE++T+ +A KY + DL + K+ +++ + +
Sbjct: 306 IVKYGEYEFDFGKPFERITLHDATIKYGADKGIVKEDLYDFDRAKATAERLGIEVQKSWG 365
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L ++ I FEE E L PT++ +P EISPLAR+ N EN ++T+RFELFI G
Sbjct: 366 LGSIVNAI-----FEEVAEHHLIQPTFLMAHPAEISPLARR-NDENPDVTDRFELFIGGR 419
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND E+Q+ RF Q+ K E + + + D D++ ALE+G+PP +G G+G+D
Sbjct: 420 EIGNGFSELNDAEDQNERFDAQVAAK-EAGDDEAMFKDEDFVVALEHGLPPTAGEGLGID 478
Query: 418 RLIMLLTNSKNIRDVILFPHLRN 440
RL ML N+ +IRDVILFP +R
Sbjct: 479 RLAMLYANAPSIRDVILFPAMRQ 501
>gi|378697436|ref|YP_005179394.1| lysine tRNA synthetase, inducible [Haemophilus influenzae 10810]
gi|301169952|emb|CBW29556.1| lysine tRNA synthetase, inducible [Haemophilus influenzae 10810]
Length = 502
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 216/443 (48%), Positives = 309/443 (69%), Gaps = 15/443 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYT-DFKNYDIGDIIGAKGTLF 59
M +R MGK +FI +QD SG KIQLY++ + + + +Y D N+D+GDIIG KGTLF
Sbjct: 71 MTRRAMGKATFITIQDMSG-----KIQLYVARDNLPEGVYAEDVGNWDLGDIIGVKGTLF 125
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL+IK + ++L+TK+LRPLP+KF L++QE++YR RY+DLI NE +R+ F R++
Sbjct: 126 KTKTNELTIKTTEVQLLTKALRPLPDKFHGLTDQEVRYRQRYLDLISNEESRRTFIIRSK 185
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR + FMEVETP+L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 186 VVAGIREYFISKGFMEVETPMLQVIPGGASARPFVTHHNALDVDMYLRIAPELYLKRLVV 245
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTM+E+Y AY +Y LM TE++++K+ +D +GTT
Sbjct: 246 GGFERVFELNRNFRNEGVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTT 305
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI--DLQNKLFLKSELKKINPKFNQKKI 297
+ Y DF K FE++T+ +A KY + DL + K+ +++ + +
Sbjct: 306 IVKYGEYEFDFGKPFERITLHDATIKYGADKGIVKEDLYDFDRAKATAERLGIEVQKSWG 365
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L ++ I FEE E L PT++ +P EISPLAR+ N EN ++T+RFELFI G
Sbjct: 366 LGSIVNAI-----FEEVAEHHLIQPTFLMAHPAEISPLARR-NDENPDVTDRFELFIGGR 419
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND E+Q+ RF Q+ K E + + + D D++ ALE+G+PP +G G+G+D
Sbjct: 420 EIGNGFSELNDAEDQNERFDAQVTAK-EAGDDEAMFKDEDFVVALEHGLPPTAGEGLGID 478
Query: 418 RLIMLLTNSKNIRDVILFPHLRN 440
RL ML N+ +IRDVILFP +R
Sbjct: 479 RLAMLYANAPSIRDVILFPAMRQ 501
>gi|242279993|ref|YP_002992122.1| lysyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
gi|242122887|gb|ACS80583.1| lysyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
Length = 508
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 221/444 (49%), Positives = 309/444 (69%), Gaps = 22/444 (4%)
Query: 4 RVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTNT 63
R GK++F LQD +G +IQ+Y + + +G +LY FK +DIGDI+G +GTLF+T T
Sbjct: 75 RSFGKVAFFHLQDPTG-----RIQVYAARDDLGADLYKIFKKFDIGDIVGVEGTLFRTKT 129
Query: 64 GELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIISS 123
EL++K + LITKS+RPLP K+ L + E +YR RY+DLI+ R++F+KRT I+ +
Sbjct: 130 DELTVKADKVDLITKSMRPLPEKYHGLKDVETRYRQRYVDLIVTPRAREIFQKRTLIVRA 189
Query: 124 IRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGFN 183
IR++++ FMEVETP++H GGA A+PF THHN+L+M++++RIAPELYLKRL++GGF
Sbjct: 190 IRNYLDSKGFMEVETPMMHPIAGGAAARPFTTHHNALDMQLYMRIAPELYLKRLLVGGFE 249
Query: 184 KIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKIDY 243
K++EIN+NFRNEGIS RHNPEFTM+EFY AY N+ LM TE+MI + + G T IDY
Sbjct: 250 KVYEINRNFRNEGISVRHNPEFTMLEFYWAYANFENLMDLTEEMISSVCKEVNGDTVIDY 309
Query: 244 QGRLLDFS-KSFEKLTIIEAIKK---YTPQ-YNEIDLQNKLFLKSELKKINPKFNQKKIL 298
Q +D + ++ ++ E+++K +P+ YN+ D +L +KK+ K + + L
Sbjct: 310 QDERIDLTPGAWHRMAFHESLEKVGGVSPEVYNDYDKCKEL-----VKKLGEKAVEGEKL 364
Query: 299 NNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNE 358
LQ LF+ E KL P +I +YPT+ISPL+R+ N EN +IT+RFELFI G E
Sbjct: 365 GK-----LQAKLFDALVEPKLIQPHFIYHYPTDISPLSRR-NEENPDITDRFELFIYGRE 418
Query: 359 IANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDR 418
+AN FSELNDP +Q RF Q+ K+ + E + D DY+ ALEYGMPPA+G GIG+DR
Sbjct: 419 LANAFSELNDPVDQRCRFMEQVAEKDAGDDEAHN-MDEDYVRALEYGMPPAAGQGIGIDR 477
Query: 419 LIMLLTNSKNIRDVILFPHLRNEN 442
L+MLLT+S +IR+VILFP LR E
Sbjct: 478 LVMLLTDSASIREVILFPLLRTEG 501
>gi|319776547|ref|YP_004139035.1| lysyl-tRNA synthetase [Haemophilus influenzae F3047]
gi|329124058|ref|ZP_08252605.1| lysine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
gi|317451138|emb|CBY87371.1| lysyl-tRNA synthetase [Haemophilus influenzae F3047]
gi|327467483|gb|EGF12981.1| lysine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
Length = 502
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 216/443 (48%), Positives = 309/443 (69%), Gaps = 15/443 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYT-DFKNYDIGDIIGAKGTLF 59
M +R MGK +FI +QD SG KIQLY++ + + + +Y D N+D+GDIIG KGTLF
Sbjct: 71 MTRRAMGKATFITIQDMSG-----KIQLYVARDNLPEGVYAEDVGNWDLGDIIGVKGTLF 125
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL+IK + ++L+TK+LRPLP+KF L++QE++YR RY+DLI NE +R+ F R++
Sbjct: 126 KTKTNELTIKTTEVQLLTKALRPLPDKFHGLTDQEVRYRQRYLDLISNEESRRTFIIRSK 185
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR + FMEVETP+L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 186 VVAGIREYFISKGFMEVETPMLQVIPGGASARPFVTHHNALDVDMYLRIAPELYLKRLVV 245
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTM+E+Y AY +Y LM TE++++K+ +D +GTT
Sbjct: 246 GGFERVFELNRNFRNEGVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTT 305
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI--DLQNKLFLKSELKKINPKFNQKKI 297
+ Y DF K FE++T+ +A KY + DL + K+ +++ + +
Sbjct: 306 IVKYGEYEFDFGKPFERITLHDATIKYGADKGIVKEDLYDFDRAKATAERLGIEVQKSWG 365
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L ++ I FEE E L PT++ +P EISPLAR+ N EN ++T+RFELFI G
Sbjct: 366 LGSIVNAI-----FEEVAEHHLIQPTFLMAHPAEISPLARR-NDENPDVTDRFELFIGGR 419
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND E+Q+ RF Q+ K E + + + D D++ ALE+G+PP +G G+G+D
Sbjct: 420 EIGNGFSELNDAEDQNERFDAQVAAK-EAGDDEAMFKDDDFVVALEHGLPPTAGEGLGID 478
Query: 418 RLIMLLTNSKNIRDVILFPHLRN 440
RL ML N+ +IRDVILFP +R
Sbjct: 479 RLAMLYANAPSIRDVILFPAMRQ 501
>gi|145641184|ref|ZP_01796764.1| lysyl-tRNA synthetase [Haemophilus influenzae R3021]
gi|145274021|gb|EDK13887.1| lysyl-tRNA synthetase [Haemophilus influenzae 22.4-21]
Length = 502
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 216/443 (48%), Positives = 309/443 (69%), Gaps = 15/443 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYT-DFKNYDIGDIIGAKGTLF 59
M +R MGK +FI +QD SG KIQLY++ + + + +Y D N+D+GDIIG KGTLF
Sbjct: 71 MTRRAMGKATFITIQDMSG-----KIQLYVARDNLPEGVYAEDVGNWDLGDIIGVKGTLF 125
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL+IK + ++L+TK+LRPLP+KF L++QE++YR RY+DLI NE +R+ F R++
Sbjct: 126 KTKTNELTIKTTEVQLLTKALRPLPDKFHGLTDQEVRYRQRYLDLISNEESRRTFIIRSK 185
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR + FMEVETP+L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 186 VVAGIREYFISKGFMEVETPMLQVIPGGASARPFVTHHNALDVDMYLRIAPELYLKRLVV 245
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTM+E+Y AY +Y LM TE++++K+ +D +GTT
Sbjct: 246 GGFERVFELNRNFRNEGVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTT 305
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI--DLQNKLFLKSELKKINPKFNQKKI 297
+ Y DF K FE++T+ +A KY + DL + K+ +++ + +
Sbjct: 306 IVKYGEYEFDFGKPFERITLHDATIKYGADKGIVKEDLYDFNRAKATAERLGIEVQKSWG 365
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L ++ I FEE E L PT++ +P EISPLAR+ N EN ++T+RFELFI G
Sbjct: 366 LGSIVNAI-----FEEVAEHHLIQPTFLMAHPAEISPLARR-NDENPDVTDRFELFIGGR 419
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND E+Q+ RF Q+ K E + + + D D++ ALE+G+PP +G G+G+D
Sbjct: 420 EIGNGFSELNDAEDQNERFDAQVAAK-EAGDDEAMFKDDDFVVALEHGLPPTAGEGLGID 478
Query: 418 RLIMLLTNSKNIRDVILFPHLRN 440
RL ML N+ +IRDVILFP +R
Sbjct: 479 RLAMLYANASSIRDVILFPAMRQ 501
>gi|343519793|ref|ZP_08756769.1| lysine--tRNA ligase [Haemophilus pittmaniae HK 85]
gi|343392349|gb|EGV04918.1| lysine--tRNA ligase [Haemophilus pittmaniae HK 85]
Length = 439
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 214/443 (48%), Positives = 309/443 (69%), Gaps = 15/443 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLY-TDFKNYDIGDIIGAKGTLF 59
M +R MGK +FI LQD SG KIQLY++ + + + +Y D ++D+GDI+G KGTLF
Sbjct: 8 MTRRAMGKATFITLQDMSG-----KIQLYVARDNLPEGVYKDDVGSWDLGDIVGVKGTLF 62
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL++K + ++L+TK+LRPLP+KF L++QE++YR RY+DLI NE +R+ F R++
Sbjct: 63 KTKTNELTVKTTEVQLLTKALRPLPDKFHGLTDQEVRYRQRYLDLIANEESRRTFIIRSK 122
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR + FMEVETP+L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 123 VVAGIREYFLSKGFMEVETPMLQVIPGGASARPFVTHHNALDVDMYLRIAPELYLKRLVV 182
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTM+E+Y AY +Y LM TE++++K+ +D +GTT
Sbjct: 183 GGFERVFELNRNFRNEGVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLALDILGTT 242
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI--DLQNKLFLKSELKKINPKFNQKKI 297
+ Y DF K FE++T+ +A KY + + DL + K+ +++ + +
Sbjct: 243 IVKYGDLEFDFGKPFERITLHDATLKYGAEKGIVKEDLYDFERAKATAERLGIEVQKSWG 302
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L ++ I FEE E L PT++ +P EISPLAR+ N EN +T+RFELFI G
Sbjct: 303 LGSIVNAI-----FEEVAEHHLIQPTFLMAHPAEISPLARR-NDENPEVTDRFELFIGGR 356
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND E+Q+ RF Q+ K E + + + D D++ ALE+G+PP +G G+G+D
Sbjct: 357 EIGNGFSELNDAEDQNERFDAQVAAK-EAGDDEAMFKDEDFVVALEHGLPPTAGEGLGID 415
Query: 418 RLIMLLTNSKNIRDVILFPHLRN 440
RL ML N+ +IRDVILFP +R
Sbjct: 416 RLAMLYANAPSIRDVILFPAMRQ 438
>gi|254427233|ref|ZP_05040940.1| lysyl-tRNA synthetase [Alcanivorax sp. DG881]
gi|196193402|gb|EDX88361.1| lysyl-tRNA synthetase [Alcanivorax sp. DG881]
Length = 504
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 210/440 (47%), Positives = 307/440 (69%), Gaps = 13/440 (2%)
Query: 3 KRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
+ ++ + +F +LQD SG +IQ++ + +++ + K++D+GDIIG +GTL K+
Sbjct: 77 RMMLDRKAFKVLQDMSG-----RIQIFAPKDET-RDVRKETKSWDLGDIIGVRGTLCKSG 130
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + L+TKSLRPLP K + L++ E KYR RY+DLI+NE+TRK F+ R +I++
Sbjct: 131 KGDLYVMMDEYLLLTKSLRPLPEKHKGLTDTEAKYRQRYVDLIVNEDTRKAFQIRAKIVA 190
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
IR+F+ + DF+E ETP+L PGGA A+PFITHHNSL++ M+LRIAPELYLKRL++GGF
Sbjct: 191 GIRNFLVQKDFVEAETPMLQVIPGGATARPFITHHNSLDLDMYLRIAPELYLKRLVVGGF 250
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
K+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y LM TE M++ + +GTT +
Sbjct: 251 EKVFEINRNFRNEGLSTRHNPEFTMLEFYQAYGDYHDLMNLTEDMLRTLAETVLGTTDVA 310
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNNLK 302
YQG + DF K F ++T+ ++I + P + L + + + L
Sbjct: 311 YQGDVYDFGKPFTRMTVFDSILHFNPDMDAAKLADPDGAREIATGLGIPLKDGYGLGK-- 368
Query: 303 KDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIANG 362
+Q+ +FE+T E +L +PT+IT YPTE+SPLAR+ + +N +TERFE F+ G EIANG
Sbjct: 369 ---VQIEIFEKTVEHRLKDPTFITEYPTEVSPLARRMD-DNPFVTERFEFFVGGREIANG 424
Query: 363 FSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLIML 422
FSELND E+Q+ RF+ Q++ K + E + +YD DY+ ALE+G+PP +G GIG+DRL+ML
Sbjct: 425 FSELNDAEDQAERFRQQVEEKAAGDDE-AMFYDEDYVVALEHGLPPTAGEGIGIDRLVML 483
Query: 423 LTNSKNIRDVILFPHLRNEN 442
T++ +IRDVILFPH+R +
Sbjct: 484 FTDAPSIRDVILFPHMRPQG 503
>gi|119470491|ref|ZP_01613194.1| lysyl-tRNA synthetase [Alteromonadales bacterium TW-7]
gi|359449288|ref|ZP_09238785.1| lysyl-tRNA synthetase, class II [Pseudoalteromonas sp. BSi20480]
gi|392537867|ref|ZP_10285004.1| lysyl-tRNA ligase [Pseudoalteromonas marina mano4]
gi|119446192|gb|EAW27469.1| lysyl-tRNA synthetase [Alteromonadales bacterium TW-7]
gi|358044937|dbj|GAA75034.1| lysyl-tRNA synthetase, class II [Pseudoalteromonas sp. BSi20480]
Length = 511
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 218/433 (50%), Positives = 302/433 (69%), Gaps = 20/433 (4%)
Query: 21 DSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTNTGELSIKVSSLKLITKSL 80
D G++Q+Y S ++ K+L + DIGDIIG KG L K+ G+L + ++ +L+TKSL
Sbjct: 81 DMKGRVQVYASKDV-QKDLKAKYGQLDIGDIIGVKGPLNKSGKGDLYVDMAEYELLTKSL 139
Query: 81 RPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIISSIRHFMEKNDFMEVETPI 140
RPLP KF LS+QE KYR RY+DLI NE TR+ F+ R+Q++ IR F+ DFMEVETP+
Sbjct: 140 RPLPEKFHGLSDQETKYRQRYVDLITNEATRETFRIRSQVVEGIRRFLADRDFMEVETPM 199
Query: 141 LHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGFNKIFEINKNFRNEGISPR 200
L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++GGF+++FEIN+NFRNEG+S R
Sbjct: 200 LQVIPGGASARPFVTHHNALDIDMYLRIAPELYLKRLVVGGFDRVFEINRNFRNEGLSTR 259
Query: 201 HNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT-----TKIDYQGRLL-----DF 250
HNPEFTMIEFY AY +YI LM TE M++ + + +G+ T D G ++ DF
Sbjct: 260 HNPEFTMIEFYQAYADYIDLMNITEDMLRTVATNVLGSPIVVNTTKDENGEVIDSVEYDF 319
Query: 251 SKSFEKLTIIEAIKKYTPQYNEI---DLQNKL-FLKSELKKINPKFNQKKILNNLKKDIL 306
K FE+L++ +AI KY P+++ D +N LK+ K+++ K + + K
Sbjct: 320 GKPFERLSMADAILKYNPEFDAAVFNDPENHFEELKAYAKQVHVKIPENCVWGPGK---F 376
Query: 307 QLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIANGFSEL 366
+FEET E L PT+IT YP E+SPLAR+ N +N +T+RFE F+ G E+ANGFSEL
Sbjct: 377 LCEIFEETAEHMLIQPTFITGYPWEVSPLARR-NDDNAFVTDRFEFFVGGRELANGFSEL 435
Query: 367 NDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLIMLLTNS 426
ND ++Q+ RF Q++ K+ + E + +YD DYI ALEYG+PP +G GIG+DRL+ML T+S
Sbjct: 436 NDAQDQAERFTRQVEEKDAGDDE-AMHYDEDYIRALEYGLPPTAGEGIGIDRLVMLFTDS 494
Query: 427 KNIRDVILFPHLR 439
I+DVILFPH+R
Sbjct: 495 STIKDVILFPHMR 507
>gi|319897323|ref|YP_004135519.1| lysyl-tRNA synthetase [Haemophilus influenzae F3031]
gi|317432828|emb|CBY81193.1| lysyl-tRNA synthetase [Haemophilus influenzae F3031]
Length = 502
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 216/443 (48%), Positives = 309/443 (69%), Gaps = 15/443 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYT-DFKNYDIGDIIGAKGTLF 59
M +R MGK +FI +QD SG KIQLY++ + + + +Y D N+D+GDIIG KGTLF
Sbjct: 71 MTRRAMGKATFITIQDMSG-----KIQLYVARDNLPEGVYAEDVGNWDLGDIIGVKGTLF 125
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL+IK + ++L+TK+LRPLP+KF L++QE++YR RY+DLI NE +R+ F R++
Sbjct: 126 KTKTNELTIKTTEVQLLTKALRPLPDKFHGLTDQEVRYRQRYLDLISNEESRRTFIIRSK 185
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR + FMEVETP+L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 186 VVAGIREYFISKGFMEVETPMLQVIPGGASARPFVTHHNALDVDMYLRIAPELYLKRLVV 245
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTM+E+Y AY +Y LM TE++++K+ +D +GTT
Sbjct: 246 GGFERVFELNRNFRNEGVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTT 305
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI--DLQNKLFLKSELKKINPKFNQKKI 297
+ Y DF K FE++T+ +A KY + DL + K+ +++ + +
Sbjct: 306 IVKYGEYEFDFGKPFERITLHDATIKYGADKGIVKEDLYDFDRAKATAERLGIEVQKSWG 365
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L ++ I FEE E L PT++ +P EISPLAR+ N EN ++T+RFELFI G
Sbjct: 366 LGSIVNAI-----FEEVAEHHLIQPTFLMAHPAEISPLARR-NDENPDVTDRFELFIGGR 419
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND E+Q+ RF Q+ K E + + + D D++ ALE+G+PP +G G+G+D
Sbjct: 420 EIGNGFSELNDAEDQNERFDAQVTAK-EAGDDEAMFKDEDFVVALEHGLPPTAGEGLGID 478
Query: 418 RLIMLLTNSKNIRDVILFPHLRN 440
RL ML N+ +IRDVILFP +R
Sbjct: 479 RLAMLYANAPSIRDVILFPAMRQ 501
>gi|419801319|ref|ZP_14326553.1| lysine--tRNA ligase [Haemophilus parainfluenzae HK262]
gi|419845909|ref|ZP_14369170.1| lysine--tRNA ligase [Haemophilus parainfluenzae HK2019]
gi|385193796|gb|EIF41145.1| lysine--tRNA ligase [Haemophilus parainfluenzae HK262]
gi|386414821|gb|EIJ29366.1| lysine--tRNA ligase [Haemophilus parainfluenzae HK2019]
Length = 502
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 218/443 (49%), Positives = 305/443 (68%), Gaps = 15/443 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYT-DFKNYDIGDIIGAKGTLF 59
M +R MGK +FI LQD SG KIQLY++ + + + +Y D ++D+GDIIG KGTLF
Sbjct: 71 MTRRAMGKATFITLQDMSG-----KIQLYVARDNLPEGVYAEDVGSWDLGDIIGVKGTLF 125
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL+IK ++L+TK+LRPLPNKF L++ E +YR RY+DLI NE +R+ F R++
Sbjct: 126 KTKTNELTIKTIEVQLLTKALRPLPNKFHGLTDMEARYRQRYLDLISNEESRRTFVIRSK 185
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR F FMEVETP+L PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 186 VVAGIREFFISKGFMEVETPMLQVIPGGASARPFITHHNALDVDMYLRIAPELYLKRLVV 245
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTM+E+Y AY +Y LM TE++++K+ +D +GTT
Sbjct: 246 GGFERVFELNRNFRNEGVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTT 305
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI--DLQNKLFLKSELKKINPKFNQKKI 297
+ Y DF K FE++T+ +A KY + DL + K+ +++ + +
Sbjct: 306 IVKYGDLEFDFGKPFERITLHDATIKYGADKGIVKEDLYDFARAKATAERLGIEVQKSWG 365
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L ++ I FEE E L PT++ +P EISPLAR+ N EN +T+RFELFI G
Sbjct: 366 LGSIVNAI-----FEEVAEHHLIQPTFLMAHPAEISPLARR-NDENPEVTDRFELFIGGR 419
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND E+Q+ RF Q+ K E + + + D D++ ALE+G+PP +G G+G+D
Sbjct: 420 EIGNGFSELNDAEDQNERFDAQVAAK-EAGDDEAMFKDDDFVVALEHGLPPTAGEGLGID 478
Query: 418 RLIMLLTNSKNIRDVILFPHLRN 440
RL ML N+ +IRDVILFP +R
Sbjct: 479 RLAMLFANAPSIRDVILFPAMRQ 501
>gi|374301089|ref|YP_005052728.1| Lysyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
gi|332554025|gb|EGJ51069.1| Lysyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
Length = 523
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 212/439 (48%), Positives = 305/439 (69%), Gaps = 14/439 (3%)
Query: 4 RVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTNT 63
R GK +F LQD +G ++Q++ S + +G++ Y FK D+GD++G +GTLF T T
Sbjct: 97 RSFGKAAFFHLQDPTG-----RLQVFASRDDLGEDAYRVFKKLDMGDLVGVRGTLFHTKT 151
Query: 64 GELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIISS 123
GEL++K S + L+TKSLRPLP+K+ L + E++YR RY+DLI+ TR++F KRTQ++
Sbjct: 152 GELTLKSSQITLLTKSLRPLPDKWHGLKDVEMRYRQRYVDLIVTPRTREIFLKRTQVVRE 211
Query: 124 IRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGFN 183
+R+F+++ FMEVETP++ PGGA AKPF THHN+L+MK+++RIAPELYLKRL++GGF
Sbjct: 212 MRNFLDREGFMEVETPMMQPIPGGATAKPFETHHNALDMKLYMRIAPELYLKRLLVGGFE 271
Query: 184 KIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKIDY 243
K++E+N+NFRNEGIS +HNPEFTM EFY AY + LM TE+M I G T ++Y
Sbjct: 272 KVYEVNRNFRNEGISTQHNPEFTMCEFYWAYATFEDLMDLTERMFAHIAQQVTGNTVVEY 331
Query: 244 QGRLLDFSKS-FEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNNLK 302
QG+ +D + + ++ +E+++ L ++++ K + +K+L + K
Sbjct: 332 QGQQIDLTPGKWARVPFLESLRTIG------GLSPEVYMDMAKAKALVRERGEKVLESDK 385
Query: 303 KDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIANG 362
+Q MLF+ E KL P +I +YPT+ISPL+R+ N ++ IT+RFELF+ G E+AN
Sbjct: 386 LGKVQAMLFDMFVEPKLVQPHFIYHYPTDISPLSRR-NDQDPTITDRFELFMSGREMANA 444
Query: 363 FSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLIML 422
FSELNDP +Q +RF Q+ K E E + Y D DY+ ALEYGMPPA+G GIG+DRL+ML
Sbjct: 445 FSELNDPVDQRLRFMEQVQEK-EAGDEEAHYMDEDYVRALEYGMPPAAGQGIGIDRLVML 503
Query: 423 LTNSKNIRDVILFPHLRNE 441
LT+S +IR+VILFP LR E
Sbjct: 504 LTDSPSIREVILFPLLRPE 522
>gi|145637999|ref|ZP_01793635.1| lysyl-tRNA synthetase [Haemophilus influenzae PittHH]
gi|145268809|gb|EDK08776.1| lysyl-tRNA synthetase [Haemophilus influenzae PittHH]
Length = 503
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 218/443 (49%), Positives = 306/443 (69%), Gaps = 15/443 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYT-DFKNYDIGDIIGAKGTLF 59
M +R MGK +FI LQD SG KIQLY++ + + + +Y D N+D+GDIIG KGTLF
Sbjct: 72 MTRRAMGKATFITLQDMSG-----KIQLYVARDNLPEGVYAEDVGNWDLGDIIGVKGTLF 126
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL+IK + ++L+TK+LRPLPNKF L++ E +YR RY+DLI NE +R+ F R++
Sbjct: 127 KTKTNELTIKTTEVQLLTKALRPLPNKFHGLTDMEARYRQRYLDLISNEESRRTFIIRSK 186
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR F FMEVETP+L PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 187 VVAGIREFFISKGFMEVETPMLQVIPGGASARPFITHHNALDVDMYLRIAPELYLKRLVV 246
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTM+E+Y +Y +Y LM TE++++K+ +D +GTT
Sbjct: 247 GGFERVFELNRNFRNEGVSVRHNPEFTMLEYYQSYADYHDLMDNTEELLRKLAIDILGTT 306
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI--DLQNKLFLKSELKKINPKFNQKKI 297
+ Y DF K FE++T+ +A KY + DL + K+ +++ + +
Sbjct: 307 IVKYGDLEFDFGKPFERITLHDATIKYGADKGIVKEDLYDFDRAKATAERLGIEVQKSWG 366
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L ++ I FEE E L PT++ +P EISPLAR+ N EN +T+RFELFI G
Sbjct: 367 LGSIVNAI-----FEEVAEHHLIQPTFLMAHPAEISPLARR-NDENPEVTDRFELFIGGR 420
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND E+Q+ RF Q+ K E + + + D D++ ALE+G+PP +G G+G+D
Sbjct: 421 EIGNGFSELNDAEDQNERFDAQVAAK-EAGDDEAMFKDDDFVVALEHGLPPTAGEGLGID 479
Query: 418 RLIMLLTNSKNIRDVILFPHLRN 440
RL ML N+ +IRDVILFP +R
Sbjct: 480 RLAMLYANASSIRDVILFPAMRQ 502
>gi|325578590|ref|ZP_08148690.1| lysine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
gi|325159826|gb|EGC71956.1| lysine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
Length = 502
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 218/443 (49%), Positives = 306/443 (69%), Gaps = 15/443 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYT-DFKNYDIGDIIGAKGTLF 59
M +R MGK +FI LQD SG KIQLY++ + + + +Y D ++D+GDIIG KGTLF
Sbjct: 71 MTRRAMGKATFITLQDMSG-----KIQLYVARDNLPEGVYAEDVGSWDLGDIIGVKGTLF 125
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL+IK + ++L+TK+LRPLPNKF L++ E +YR RY+DLI NE +R+ F R++
Sbjct: 126 KTKTNELTIKTTEVQLLTKALRPLPNKFHGLTDMEARYRQRYLDLISNEESRRTFIIRSK 185
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR F FMEVETP+L PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 186 VVAGIREFFISKGFMEVETPMLQVIPGGASARPFITHHNALDVDMYLRIAPELYLKRLVV 245
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTM+E+Y AY +Y LM TE++++K+ +D +GTT
Sbjct: 246 GGFERVFELNRNFRNEGVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTT 305
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI--DLQNKLFLKSELKKINPKFNQKKI 297
+ Y DF K FE++T+ +A KY + DL + K+ +++ + +
Sbjct: 306 IVKYGDLEFDFGKPFERITLHDATIKYGADKGIVKEDLYDFDRAKATAERLGIEVQKSWG 365
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L ++ I FEE E L PT++ +P EISPLAR+ N EN +T+RFELFI G
Sbjct: 366 LGSIVNAI-----FEEVAEHHLIQPTFLMAHPAEISPLARR-NDENPEVTDRFELFIGGR 419
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND E+Q+ RF Q+ K E + + + D D++ ALE+G+PP +G G+G+D
Sbjct: 420 EIGNGFSELNDAEDQNERFDAQVAAK-EAGDDEAMFKDDDFVVALEHGLPPTAGEGLGID 478
Query: 418 RLIMLLTNSKNIRDVILFPHLRN 440
RL ML N+ +IRDVILFP +R
Sbjct: 479 RLAMLYANAPSIRDVILFPAMRQ 501
>gi|385330509|ref|YP_005884460.1| lysyl-tRNA synthetase [Marinobacter adhaerens HP15]
gi|311693659|gb|ADP96532.1| lysyl-tRNA synthetase [Marinobacter adhaerens HP15]
Length = 511
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 215/448 (47%), Positives = 304/448 (67%), Gaps = 28/448 (6%)
Query: 5 VMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTNTG 64
++ + +F ++QD +G +IQ+Y S K++ D K++D+GDI+G +GTL K+ G
Sbjct: 73 MLDRKAFKVVQDMTG-----RIQIYAS-----KDVQKDTKHWDLGDIVGVRGTLSKSGKG 122
Query: 65 ELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIISSI 124
+L + + L+TKSLRPLP K + L++ E +YRHRY+DL++NE++R+VF R++IIS++
Sbjct: 123 DLYVTMDEYVLLTKSLRPLPEKHKGLTDTEARYRHRYVDLMVNEDSRRVFYARSKIISAM 182
Query: 125 RHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGFNK 184
R + DFMEVETP+L PGGA A+PF+THHN+L + M+LRIAPEL+LKRL++GGF +
Sbjct: 183 RQYFTDRDFMEVETPMLQVIPGGATARPFVTHHNALGIDMYLRIAPELFLKRLVVGGFER 242
Query: 185 IFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKIDYQ 244
+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y LM TE M++ I +GTT +
Sbjct: 243 VFEINRNFRNEGLSTRHNPEFTMVEFYQAYADYNDLMDLTEDMLRTITQKVLGTTTV-VN 301
Query: 245 GRLL----------DFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQ 294
R L DF K+FE+LT+++AI +Y P L + + K + +
Sbjct: 302 SRTLADGSEETVEYDFGKTFERLTVVDAILRYNPDIKPEQLADDASARQVAKDLGIHLKE 361
Query: 295 KKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFI 354
L +Q+ +FE T E +L PT+IT YP E+SPLAR + N +TERFE F+
Sbjct: 362 GWGLGK-----VQIEIFEATAEHRLMQPTFITEYPKEVSPLARCKD-SNPFVTERFEFFV 415
Query: 355 IGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGI 414
G EIANGFSELND E+Q+ RF+ Q+ K+ + E + +YD DY+ ALEYG+PP +G GI
Sbjct: 416 GGREIANGFSELNDAEDQAERFQAQVAEKDAGDDE-AMFYDEDYVMALEYGLPPTAGEGI 474
Query: 415 GVDRLIMLLTNSKNIRDVILFPHLRNEN 442
G+DRL MLLTNS +IRDVILFP +R E+
Sbjct: 475 GIDRLAMLLTNSPSIRDVILFPAMRPEH 502
>gi|358451291|ref|ZP_09161725.1| lysyl-tRNA synthetase [Marinobacter manganoxydans MnI7-9]
gi|357224524|gb|EHJ03055.1| lysyl-tRNA synthetase [Marinobacter manganoxydans MnI7-9]
Length = 511
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 216/448 (48%), Positives = 303/448 (67%), Gaps = 28/448 (6%)
Query: 5 VMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTNTG 64
++ + +F ++QD +G +IQ+Y S K++ D K++D+GDI+G +GTL K+ G
Sbjct: 73 MLDRKAFKVVQDMTG-----RIQIYAS-----KDVQKDTKHWDLGDIVGVRGTLSKSGKG 122
Query: 65 ELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIISSI 124
+L + + L+TKSLRPLP K + L++ E +YRHRY+DL++NE++R+VF R++IIS++
Sbjct: 123 DLYVTMDEYVLLTKSLRPLPEKHKGLTDTEARYRHRYVDLMVNEDSRRVFYARSKIISAM 182
Query: 125 RHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGFNK 184
R + DFMEVETP+L PGGA A+PF+THHN+L + M+LRIAPEL+LKRL++GGF +
Sbjct: 183 RQYFTDRDFMEVETPMLQVIPGGATARPFVTHHNALGIDMYLRIAPELFLKRLVVGGFER 242
Query: 185 IFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKIDYQ 244
+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y LM TE M++ I +GTT +
Sbjct: 243 VFEINRNFRNEGLSTRHNPEFTMVEFYQAYADYNDLMDLTEDMLRTITQKVLGTTTV-VN 301
Query: 245 GRLL----------DFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQ 294
R L DF K+FE+LT+++AI +Y P L + + K +
Sbjct: 302 SRTLADGSEETVEYDFGKTFERLTVVDAILRYNPDIKPEQLADDASARQVAKNLGIHLKD 361
Query: 295 KKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFI 354
L +Q+ +FE T E +L PT+IT YP E+SPLAR + N +TERFE F+
Sbjct: 362 GWGLGK-----VQIEIFEATAEHRLMQPTFITEYPKEVSPLARCKD-SNPFVTERFEFFV 415
Query: 355 IGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGI 414
G EIANGFSELND E+Q+ RF+ Q+ K+ + E + +YD DYI ALEYG+PP +G GI
Sbjct: 416 GGREIANGFSELNDAEDQAERFQAQVAEKDAGDDE-AMFYDEDYIMALEYGLPPTAGEGI 474
Query: 415 GVDRLIMLLTNSKNIRDVILFPHLRNEN 442
G+DRL MLLTNS +IRDVILFP +R E+
Sbjct: 475 GIDRLAMLLTNSASIRDVILFPAMRPEH 502
>gi|410635619|ref|ZP_11346227.1| lysyl-tRNA synthetase, class II [Glaciecola lipolytica E3]
gi|410144702|dbj|GAC13432.1| lysyl-tRNA synthetase, class II [Glaciecola lipolytica E3]
Length = 514
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 226/451 (50%), Positives = 316/451 (70%), Gaps = 25/451 (5%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
R++ K F++LQD +G +IQ Y S + K++ + + DIGDIIG KG L K+
Sbjct: 68 RILAKRGPFLLLQDMTG-----RIQSYASKDT-QKDIKARYGSLDIGDIIGVKGVLHKSG 121
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + +L+TKSLRPLP KF L++QE KYR RY+DLI N TR+ F R++I++
Sbjct: 122 KGDLYVNMDEYQLLTKSLRPLPEKFHGLADQETKYRQRYVDLITNTQTRETFLIRSKIVT 181
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
IR+F+ + +FMEVETP+L PGGA AKPF+THHN+L++ M+LRIAPELYLKRL++GGF
Sbjct: 182 GIRNFLTQRNFMEVETPMLQVIPGGATAKPFVTHHNALDIDMYLRIAPELYLKRLVVGGF 241
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKI- 241
++FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y LM TE M++ + D +GTT I
Sbjct: 242 ERVFEINRNFRNEGLSTRHNPEFTMLEFYQAYADYHDLMNLTEDMLRTLAKDVLGTTIIK 301
Query: 242 ----DYQGRLL-----DFSKSFEKLTIIEAIKKYTPQYNEI---DLQNKL-FLKSELKKI 288
D +G ++ DF K FE+LT+ +A+ KY P+ NE D +N L LK+ K++
Sbjct: 302 STEKDLEGNVVSEVEYDFGKPFERLTMNDAVLKYWPEANEAAIKDPENHLPELKAMAKQL 361
Query: 289 NPKFNQKKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITE 348
+ K + + K + + +FE T E KL PT+IT YP E+SPLAR+ N +N+ +T+
Sbjct: 362 HIKEPEVDGIWGAGKYLCE--IFEATAEEKLIQPTFITAYPWEVSPLARR-NDDNHFVTD 418
Query: 349 RFELFIIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPP 408
RFE F+ G E+ANGFSELND E+Q+ RFK Q++ K+ + E + ++D DYI ALEYG+PP
Sbjct: 419 RFEFFVGGRELANGFSELNDSEDQAARFKKQVEEKDAGDDE-AMHFDEDYITALEYGLPP 477
Query: 409 ASGCGIGVDRLIMLLTNSKNIRDVILFPHLR 439
+G GIG+DRL+ML T+S I+DVILFPH+R
Sbjct: 478 TAGEGIGIDRLVMLFTDSPTIKDVILFPHMR 508
>gi|345430388|ref|YP_004823509.1| lysine tRNA synthetase, inducible [Haemophilus parainfluenzae T3T1]
gi|301156452|emb|CBW15923.1| lysine tRNA synthetase, inducible [Haemophilus parainfluenzae T3T1]
Length = 502
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 219/443 (49%), Positives = 306/443 (69%), Gaps = 15/443 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYT-DFKNYDIGDIIGAKGTLF 59
M +R MGK +FI LQD SG KIQLY++ + + + +Y D ++D+GDIIG KGTLF
Sbjct: 71 MTRRAMGKATFITLQDMSG-----KIQLYVARDNLPEGVYEEDVGSWDLGDIIGVKGTLF 125
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL+IK + ++L+TK+LRPLPNKF L++ E +YR RY+DLI NE +R+ F R++
Sbjct: 126 KTKTNELTIKTTEVQLLTKALRPLPNKFHGLTDMEARYRQRYLDLISNEESRRTFIIRSK 185
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+I+ IR F FMEVETP+L PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 186 VIAGIREFFISKGFMEVETPMLQVIPGGASARPFITHHNALDVDMYLRIAPELYLKRLVV 245
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTM+E+Y AY +Y LM TE++++K+ +D +GTT
Sbjct: 246 GGFERVFELNRNFRNEGVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTT 305
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI--DLQNKLFLKSELKKINPKFNQKKI 297
+ Y DF K FE++T+ +A KY + DL + K+ +++ + +
Sbjct: 306 IVKYGDLEFDFGKPFERITLHDATIKYGADKGIVKEDLYDFDRAKATAERLGIEVQKSWG 365
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L ++ I FEE E L PT++ +P EISPLAR+ N EN +T+RFELFI G
Sbjct: 366 LGSIVNAI-----FEEVAEHHLIQPTFLMAHPAEISPLARR-NDENPEVTDRFELFIGGR 419
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND E+Q+ RF Q+ K E + + + D D++ ALE+G+PP +G G+G+D
Sbjct: 420 EIGNGFSELNDAEDQNERFDAQVAAK-EAGDDEAMFKDDDFVVALEHGLPPTAGEGLGID 478
Query: 418 RLIMLLTNSKNIRDVILFPHLRN 440
RL ML N+ +IRDVILFP +R
Sbjct: 479 RLAMLYANAPSIRDVILFPAMRQ 501
>gi|387770228|ref|ZP_10126411.1| lysine--tRNA ligase [Pasteurella bettyae CCUG 2042]
gi|386904590|gb|EIJ69379.1| lysine--tRNA ligase [Pasteurella bettyae CCUG 2042]
Length = 503
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 214/443 (48%), Positives = 310/443 (69%), Gaps = 15/443 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDF-KNYDIGDIIGAKGTLF 59
M +R MGK +FI +QD SG +IQLY++ + + + +Y ++ K++D+GDI+G KG+LF
Sbjct: 71 MTRRTMGKATFITIQDMSG-----RIQLYVARDNLPEGVYAEYVKSWDLGDIVGIKGSLF 125
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL++K ++L+TK+LRPLP+KF LS+QEI+YR RY+DLI N+ +R+ F R++
Sbjct: 126 KTKTNELTVKAHEVQLLTKALRPLPDKFHGLSDQEIRYRQRYLDLISNDESRRTFVIRSK 185
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+I+ IR + F+EVETP+L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 186 VIAGIREYFIGKGFIEVETPMLQVIPGGAAARPFVTHHNALDIDMYLRIAPELYLKRLVV 245
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTMIE+Y AY +Y LM TE++++K+ +D +GTT
Sbjct: 246 GGFERVFELNRNFRNEGVSVRHNPEFTMIEYYQAYADYHDLMDNTEELLRKLALDILGTT 305
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI--DLQNKLFLKSELKKINPKFNQKKI 297
+ Y DF K FE++T+ +A+ KY + DL + K+ K+ +
Sbjct: 306 IVPYGEYEFDFGKPFERITMHDAVIKYGAAKGIVKEDLYDLDRAKAVATKLGIAIQKSWG 365
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L +L I FEE E L PT++ +P EISPLAR+ N EN +T+RFELFI G
Sbjct: 366 LGSLVNAI-----FEEVAEHHLIQPTFLMAHPAEISPLARR-NDENPEVTDRFELFIGGR 419
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND E+Q+ RF Q+ K+ + E + + D D++ ALE+G+PP +G G+G+D
Sbjct: 420 EIGNGFSELNDAEDQAERFDAQVAAKDAGDDE-AMFKDDDFVTALEHGLPPTAGEGLGID 478
Query: 418 RLIMLLTNSKNIRDVILFPHLRN 440
RL ML N+ +IRDVILFP +++
Sbjct: 479 RLAMLYANAPSIRDVILFPAMKH 501
>gi|219682343|ref|YP_002468727.1| lysyl-tRNA synthetase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon
pisum)]
gi|384226233|ref|YP_005617396.1| lysyl-tRNA synthetase [Buchnera aphidicola str. TLW03
(Acyrthosiphon pisum)]
gi|384227292|ref|YP_005619042.1| lysyl-tRNA synthetase [Buchnera aphidicola str. LL01 (Acyrthosiphon
pisum)]
gi|219622076|gb|ACL30232.1| lysyl-tRNA synthetase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon
pisum)]
gi|311086168|gb|ADP66250.1| lysyl-tRNA synthetase [Buchnera aphidicola str. LL01 (Acyrthosiphon
pisum)]
gi|311086740|gb|ADP66821.1| lysyl-tRNA synthetase [Buchnera aphidicola str. TLW03
(Acyrthosiphon pisum)]
Length = 506
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 236/439 (53%), Positives = 307/439 (69%), Gaps = 15/439 (3%)
Query: 3 KRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYT-DFKNYDIGDIIGAKGTLFKT 61
+R+MGK SF LQD G KIQ+YI+ + I + Y FK +DIGDI+G GTLFKT
Sbjct: 77 RRIMGKASFFTLQDIEG-----KIQIYINEKKISSDFYRFHFKKWDIGDILGVIGTLFKT 131
Query: 62 NTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQII 121
TGELSI ++ ++ KSL+PLP+KF LSNQEI+YR RY+DLI N +FK R+ II
Sbjct: 132 KTGELSIYCKNVTILNKSLKPLPDKFHGLSNQEIRYRKRYLDLISNNKLYSIFKNRSNII 191
Query: 122 SSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGG 181
++IR+FM +NDF+EVETP+L N PGGA A+PFIT+HN ++ +M+LRIAPELYLK+LIIGG
Sbjct: 192 TAIRNFMIENDFLEVETPMLQNIPGGANARPFITYHNEIDSQMYLRIAPELYLKKLIIGG 251
Query: 182 FNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKI 241
F +IFE+N+NFRNEG+S RHNPEFTM+E Y AY+NY +M+ TE + K I KI
Sbjct: 252 FERIFELNRNFRNEGVSARHNPEFTMMEAYIAYSNYEDMMELTENLFKSITKFLFQDNKI 311
Query: 242 DYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNNL 301
+ DFS+ F +LT+ ++I ++ DL++ ++ K I K +K +
Sbjct: 312 IFNNNNFDFSQPFRRLTMTDSILEFNSTITSSDLKDFYKIREFAKSIGIKVEKKWGCGQI 371
Query: 302 KKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIAN 361
+ +I FE+T E KL PT+IT YP E+SPLAR+++I N NIT+RFELFI G EI N
Sbjct: 372 ETEI-----FEKTVEKKLIQPTFITQYPVEVSPLARRNDI-NLNITDRFELFIGGYEIGN 425
Query: 362 GFSELNDPEEQSVRFKNQIDLKN-EINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
GFSELND E+Q RF NQI N E N L +YD +YI AL+YG+PP SG GIG+DRLI
Sbjct: 426 GFSELNDVEDQKTRFLNQIQKSNKEDNKNL--FYDKEYIEALQYGLPPTSGLGIGIDRLI 483
Query: 421 MLLTNSKNIRDVILFPHLR 439
M+LTN +IRDVILFP LR
Sbjct: 484 MILTNQISIRDVILFPTLR 502
>gi|145627807|ref|ZP_01783608.1| lysyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
gi|144979582|gb|EDJ89241.1| lysyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
Length = 502
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 214/443 (48%), Positives = 308/443 (69%), Gaps = 15/443 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLY-TDFKNYDIGDIIGAKGTLF 59
M +R MGK +FI +QD SG KIQLY++ + + + +Y D +D+GDI+G KGTLF
Sbjct: 71 MTRRAMGKATFITIQDMSG-----KIQLYVARDNLPEGVYKDDVGTWDLGDIVGVKGTLF 125
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL++K + ++L+TK+LRPLP+KF L++QE++YR RY+DLI NE +R+ F R++
Sbjct: 126 KTKTDELTVKTTEVQLLTKALRPLPDKFHGLTDQEVRYRQRYLDLISNEESRRTFIIRSK 185
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR + FMEVETP+L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 186 VVAGIREYFISKGFMEVETPMLQVIPGGASARPFVTHHNALDVDMYLRIAPELYLKRLVV 245
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTM+E+Y AY NY LM TE++++K+ +D +GTT
Sbjct: 246 GGFERVFELNRNFRNEGVSVRHNPEFTMLEYYQAYANYHDLMDNTEELLRKLAIDILGTT 305
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI--DLQNKLFLKSELKKINPKFNQKKI 297
+ Y DF K FE++T+ +A KY + DL + K+ +++ + +
Sbjct: 306 IVKYGEYEFDFGKPFERITLHDATIKYGADKGIVKEDLYDFDRAKATAERLGIEVQKSWG 365
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L ++ I FEE E L PT++ +P EISPLAR+ N EN ++T+RFELFI G
Sbjct: 366 LGSIVNAI-----FEEVAEHHLIQPTFLMAHPAEISPLARR-NDENPDVTDRFELFIGGR 419
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND E+Q+ RF Q+ K E + + + D D++ ALE+G+PP +G G+G+D
Sbjct: 420 EIGNGFSELNDAEDQNERFDAQVAAK-EAGDDEAMFKDEDFVVALEHGLPPTAGEGLGID 478
Query: 418 RLIMLLTNSKNIRDVILFPHLRN 440
RL ML N+ +IRDVILFP +R
Sbjct: 479 RLAMLYANAPSIRDVILFPAMRQ 501
>gi|32491190|ref|NP_871444.1| hypothetical protein WGLp441 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|31340438|sp|Q8D2B3.1|SYK_WIGBR RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|25166397|dbj|BAC24587.1| lysS [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 493
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 232/440 (52%), Positives = 302/440 (68%), Gaps = 14/440 (3%)
Query: 4 RVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDF-KNYDIGDIIGAKGTLFKTN 62
RVMGK SF+ +++ KIQ+YIS I KN Y K DIGDIIG G LFKTN
Sbjct: 66 RVMGKSSFLEIRNIES-----KIQIYISENNISKNKYKKIIKQLDIGDIIGVLGVLFKTN 120
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
T ELS+K L ++TKS++P PNKFQ L NQEI YR RY+DLI N+ +R FK R+ II+
Sbjct: 121 TEELSVKCKKLYVLTKSVKPFPNKFQGLLNQEICYRKRYLDLITNKKSRNTFKTRSIIIN 180
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR FM K +F+EVETP++HN PGG ++KPFITHH+SLN+ ++LRIAPELYLK+LI+GGF
Sbjct: 181 NIRKFMIKENFVEVETPMMHNIPGGGLSKPFITHHSSLNIDLYLRIAPELYLKQLIVGGF 240
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
KIFEIN+NFRNEG+S HNPEFTM+EFY AY +Y LMK E ++ I+ KI+
Sbjct: 241 EKIFEINRNFRNEGLSSNHNPEFTMMEFYVAYIDYEDLMKIVENLLNYIVDKIFNKNKIN 300
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNNLK 302
Y +++F K F+K+++ ++I +Y + D+ + + K N + N
Sbjct: 301 YNNFMINFEKPFKKISMQDSICEYCKNVTQSDISDIKIITDIAKSFNITVEK-----NWG 355
Query: 303 KDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIANG 362
LQ +F E E L PT++ +YPTEISPLAR N IT+RFELF+ GNEI NG
Sbjct: 356 VGKLQEKIFSEKVEKNLIQPTFVIDYPTEISPLARAKK-NNKLITDRFELFVCGNEIGNG 414
Query: 363 FSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLIML 422
FSELNDP+EQ RF Q LKN+ E + +YD DYI +LEYG+PP +GCGIG+DRL+M+
Sbjct: 415 FSELNDPKEQKNRFLEQ--LKNKTLEEQNIFYDKDYITSLEYGLPPTAGCGIGIDRLVMI 472
Query: 423 LTNSKNIRDVILFPHLRNEN 442
LTN+ +I+DVILFP LRN N
Sbjct: 473 LTNNYSIKDVILFPTLRNAN 492
>gi|392556536|ref|ZP_10303673.1| lysyl-tRNA ligase [Pseudoalteromonas undina NCIMB 2128]
Length = 511
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 217/433 (50%), Positives = 301/433 (69%), Gaps = 20/433 (4%)
Query: 21 DSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTNTGELSIKVSSLKLITKSL 80
D G++Q Y S ++ K+L + DIGDIIG KG L K+ G+L ++++ +L+TKSL
Sbjct: 81 DMKGRVQAYASKDV-QKDLKAKYGQLDIGDIIGVKGALNKSGKGDLYVEMTEYELLTKSL 139
Query: 81 RPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIISSIRHFMEKNDFMEVETPI 140
RPLP KF LS+QE KYR RY+DLI NE TR+ F+ R+Q++ IR F+ DFMEVETP+
Sbjct: 140 RPLPEKFHGLSDQETKYRQRYVDLITNEATRETFRIRSQVVEGIRRFLADRDFMEVETPM 199
Query: 141 LHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGFNKIFEINKNFRNEGISPR 200
L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++GGF+++FEIN+NFRNEG+S R
Sbjct: 200 LQVIPGGATARPFVTHHNALDIDMYLRIAPELYLKRLVVGGFDRVFEINRNFRNEGLSTR 259
Query: 201 HNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT-----TKIDYQGRLL-----DF 250
HNPEFTMIEFY AY +YI LM TE M++ + + +G+ T D G ++ DF
Sbjct: 260 HNPEFTMIEFYQAYADYIDLMNITEDMLRTVATNVLGSPIVVNTTKDENGEVVDSVEYDF 319
Query: 251 SKSFEKLTIIEAIKKYTPQYNEI---DLQNKL-FLKSELKKINPKFNQKKILNNLKKDIL 306
+ F +L++ +AI KY P+++ D +N LK+ K+++ K + + K
Sbjct: 320 GQPFTRLSMADAILKYNPEFDAAVFNDPENHFEELKAYAKQVHVKIPENCVWGPGK---F 376
Query: 307 QLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIANGFSEL 366
+FEET E L PT+IT YP E+SPLAR+ N EN +T+RFE F+ G E+ANGFSEL
Sbjct: 377 LCEIFEETAEHMLIQPTFITGYPWEVSPLARR-NDENPFVTDRFEFFVGGRELANGFSEL 435
Query: 367 NDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLIMLLTNS 426
ND ++Q+ RF Q++ K+ + E + +YD DYI ALEYG+PP +G GIG+DRL+ML T+S
Sbjct: 436 NDAQDQAERFTRQVEEKDAGDDE-AMHYDEDYIRALEYGLPPTAGEGIGIDRLVMLFTDS 494
Query: 427 KNIRDVILFPHLR 439
I+DVILFPH+R
Sbjct: 495 STIKDVILFPHMR 507
>gi|399545707|ref|YP_006559015.1| lysyl-tRNA synthetase [Marinobacter sp. BSs20148]
gi|399161039|gb|AFP31602.1| Lysyl-tRNA synthetase [Marinobacter sp. BSs20148]
Length = 510
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 214/447 (47%), Positives = 307/447 (68%), Gaps = 26/447 (5%)
Query: 5 VMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTNTG 64
++ + +F ++QD +G +IQ+Y + K++ K++D+GDIIG +G L ++ G
Sbjct: 72 MLDRKAFKVVQDVTG-----RIQVYAT-----KDVQKATKHWDLGDIIGVRGILARSGKG 121
Query: 65 ELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIISSI 124
+L + + +L+TKSLRPLP K + L++ E +YRHRY+DL++NE++R+VF R++II+++
Sbjct: 122 DLYVIMDDYRLLTKSLRPLPEKHKGLTDTESRYRHRYVDLMVNEDSRRVFLARSKIITAM 181
Query: 125 RHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGFNK 184
R F DFMEVETP+L PGGA A+PF+THHN+L + M+LRIAPELYLKRL++GGF +
Sbjct: 182 RQFFADRDFMEVETPMLQVIPGGATARPFMTHHNALGIDMYLRIAPELYLKRLVVGGFER 241
Query: 185 IFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT-----T 239
+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y LM TE M++ I +G+ T
Sbjct: 242 VFEINRNFRNEGLSTRHNPEFTMVEFYQAYADYNDLMDMTEDMLRSIAEQVLGSSLVVNT 301
Query: 240 KIDYQG---RL-LDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQK 295
+D G R+ DF K+F++LT+++AI +Y + L ++ F + K + K
Sbjct: 302 AVDADGNETRIEYDFGKTFDRLTVVDAIVRYNENVSSEQLADETFARQMAKDLGVKIKDS 361
Query: 296 KILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFII 355
L + + +FEET E +L PT+IT YP E+SPLAR + N +TERFE F+
Sbjct: 362 WGLGK-----VHIEIFEETAEHRLMQPTFITEYPKEVSPLARCKD-SNPFVTERFEFFVG 415
Query: 356 GNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIG 415
G EIANGFSELND E+Q+ RF+ Q+ K+ + E + +YD DY+ ALEYGMPP +G GIG
Sbjct: 416 GREIANGFSELNDAEDQAERFRAQVAEKDAGDDE-AMFYDEDYVMALEYGMPPTAGEGIG 474
Query: 416 VDRLIMLLTNSKNIRDVILFPHLRNEN 442
+DRL MLLTNS +IRDVILFP +R E+
Sbjct: 475 IDRLAMLLTNSASIRDVILFPAMRPEH 501
>gi|416892773|ref|ZP_11924097.1| lysyl-tRNA synthetase [Aggregatibacter aphrophilus ATCC 33389]
gi|347814471|gb|EGY31120.1| lysyl-tRNA synthetase [Aggregatibacter aphrophilus ATCC 33389]
Length = 502
Score = 439 bits (1130), Expect = e-121, Method: Compositional matrix adjust.
Identities = 213/443 (48%), Positives = 309/443 (69%), Gaps = 15/443 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLY-TDFKNYDIGDIIGAKGTLF 59
M +R MGK +FI +QD SG KIQLY++ + + + +Y D ++D+GDI+G KG+LF
Sbjct: 71 MTRRAMGKATFITIQDMSG-----KIQLYVARDNLPEGVYKDDVGHWDLGDIVGIKGSLF 125
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL++K + ++L+TK+LRPLP+KF L++QE++YR RY+DLI NE +R+ F R++
Sbjct: 126 KTKTDELTVKATKVQLLTKALRPLPDKFHGLTDQEVRYRQRYLDLISNEESRRTFIIRSK 185
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR + FMEVETP+L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 186 VVAGIREYFLSKGFMEVETPMLQVIPGGAAARPFVTHHNALDVDMYLRIAPELYLKRLVV 245
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTM+E+Y AY +Y LM TE++++K+ +D +GTT
Sbjct: 246 GGFERVFELNRNFRNEGVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTT 305
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI--DLQNKLFLKSELKKINPKFNQKKI 297
+ Y DF K FE++T+ AI KY + + DL + K+ +++ + +
Sbjct: 306 IVKYGDLEFDFGKPFERITLHNAIIKYGAEKGIVKEDLYDFDRAKATAERLGIEVQKSWG 365
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L ++ I FEE E L PT++ +P EISPLAR+ N EN +T+RFELFI G
Sbjct: 366 LGSIVNAI-----FEEVAEHHLIQPTFLMAHPAEISPLARR-NDENPEVTDRFELFIGGR 419
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND E+Q+ RF Q+ K E + + + D D++ ALE+G+PP +G G+G+D
Sbjct: 420 EIGNGFSELNDAEDQNERFDAQVAAK-EAGDDEAMFKDEDFVVALEHGLPPTAGEGLGID 478
Query: 418 RLIMLLTNSKNIRDVILFPHLRN 440
RL ML N+ +IRDVILFP +R
Sbjct: 479 RLAMLYANAPSIRDVILFPAMRQ 501
>gi|260582140|ref|ZP_05849934.1| lysyl-tRNA synthetase [Haemophilus influenzae NT127]
gi|260094772|gb|EEW78666.1| lysyl-tRNA synthetase [Haemophilus influenzae NT127]
Length = 502
Score = 439 bits (1130), Expect = e-121, Method: Compositional matrix adjust.
Identities = 213/443 (48%), Positives = 308/443 (69%), Gaps = 15/443 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLY-TDFKNYDIGDIIGAKGTLF 59
M +R MGK +FI +QD SG KIQLY++ + + + +Y D +D+GDI+G KGTLF
Sbjct: 71 MTRRAMGKATFITIQDMSG-----KIQLYVARDNLPEGVYKDDVGTWDLGDIVGVKGTLF 125
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL++K + ++L+TK+LRPLP+KF L++QE++YR RY+DLI NE +R+ F R++
Sbjct: 126 KTKTDELTVKTTEVQLLTKALRPLPDKFHGLTDQEVRYRQRYLDLISNEESRRTFIIRSK 185
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR + FMEVETP+L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 186 VVAGIREYFISKGFMEVETPMLQVIPGGASARPFVTHHNALDVDMYLRIAPELYLKRLVV 245
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTM+E+Y AY +Y LM TE++++K+ +D +GTT
Sbjct: 246 GGFERVFELNRNFRNEGVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTT 305
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI--DLQNKLFLKSELKKINPKFNQKKI 297
+ Y DF K FE++T+ +A KY + DL + K+ +++ + +
Sbjct: 306 IVKYGEYEFDFGKPFERITLHDATVKYGADKGIVKEDLYDFDRAKATAERLGIEVQKSWG 365
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L ++ I FEE E L PT++ +P EISPLAR+ N EN ++T+RFELFI G
Sbjct: 366 LGSIVNAI-----FEEVAEHHLIQPTFLMAHPAEISPLARR-NDENPDVTDRFELFIGGR 419
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND E+Q+ RF Q+ K E + + + D D++ ALE+G+PP +G G+G+D
Sbjct: 420 EIGNGFSELNDAEDQNERFDAQVAAK-EAGDDEAMFKDEDFVVALEHGLPPTAGEGLGID 478
Query: 418 RLIMLLTNSKNIRDVILFPHLRN 440
RL ML N+ +IRDVILFP +R
Sbjct: 479 RLAMLYANAPSIRDVILFPAMRQ 501
>gi|359434635|ref|ZP_09224898.1| lysyl-tRNA synthetase, class II [Pseudoalteromonas sp. BSi20652]
gi|357918844|dbj|GAA61147.1| lysyl-tRNA synthetase, class II [Pseudoalteromonas sp. BSi20652]
Length = 511
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 216/433 (49%), Positives = 300/433 (69%), Gaps = 20/433 (4%)
Query: 21 DSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTNTGELSIKVSSLKLITKSL 80
D G++Q+Y S ++ K+L + DIGDIIG KG L K+ G+L + + +L+TKSL
Sbjct: 81 DMKGRVQVYASKDV-QKDLKAKYGQLDIGDIIGVKGPLNKSGKGDLYVDMVEYQLLTKSL 139
Query: 81 RPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIISSIRHFMEKNDFMEVETPI 140
RPLP KF LS+QE KYR RY+DLI NE TR+ F+ R+Q++ IR F+ DFMEVETP+
Sbjct: 140 RPLPEKFHGLSDQETKYRQRYVDLITNEATRETFRIRSQVVEGIRRFLADRDFMEVETPM 199
Query: 141 LHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGFNKIFEINKNFRNEGISPR 200
L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++GGF+++FEIN+NFRNEG+S R
Sbjct: 200 LQVIPGGASARPFVTHHNALDIDMYLRIAPELYLKRLVVGGFDRVFEINRNFRNEGLSTR 259
Query: 201 HNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKI-----DYQGRLL-----DF 250
HNPEFTMIEFY AY +YI LM TE M++ + + +G+ + D G ++ DF
Sbjct: 260 HNPEFTMIEFYQAYADYIDLMNITEDMLRTVAQNVLGSAVVVNTTKDENGEVIDSVEYDF 319
Query: 251 SKSFEKLTIIEAIKKYTPQYNEI---DLQNKL-FLKSELKKINPKFNQKKILNNLKKDIL 306
+ F +L++ +AI KY P+++ D +N LK+ K+++ K + + K
Sbjct: 320 GQPFTRLSMADAILKYNPEFDAAVFNDPENHFEELKAYAKQVHVKIPENCVWGPGK---F 376
Query: 307 QLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIANGFSEL 366
+FEET E L PT+IT YP E+SPLAR+ N EN +T+RFE F+ G E+ANGFSEL
Sbjct: 377 LCEIFEETAEHMLIQPTFITGYPWEVSPLARR-NDENAFVTDRFEFFVGGRELANGFSEL 435
Query: 367 NDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLIMLLTNS 426
ND ++Q+ RF Q++ K+ + E + +YD DYI ALEYG+PP +G GIG+DRL+ML T+S
Sbjct: 436 NDAQDQAERFTRQVEEKDAGDDE-AMHYDEDYIRALEYGLPPTAGEGIGIDRLVMLFTDS 494
Query: 427 KNIRDVILFPHLR 439
I+DVILFPH+R
Sbjct: 495 STIKDVILFPHMR 507
>gi|148828360|ref|YP_001293113.1| lysyl-tRNA synthetase [Haemophilus influenzae PittGG]
gi|229559859|sp|A5UIX4.1|SYK_HAEIG RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|148719602|gb|ABR00730.1| lysyl-tRNA synthetase [Haemophilus influenzae PittGG]
Length = 502
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 214/443 (48%), Positives = 308/443 (69%), Gaps = 15/443 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTD-FKNYDIGDIIGAKGTLF 59
M +R MGK +FI +QD SG KIQLY++ + + + +Y D +D+GDIIG KGTLF
Sbjct: 71 MTRRAMGKATFITIQDMSG-----KIQLYVARDNLPEGVYKDEVGTWDLGDIIGVKGTLF 125
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL++K + ++L+TK+LRPLP+KF L++QE++YR RY+DLI NE +R+ F R++
Sbjct: 126 KTKTDELTVKTTEVQLLTKALRPLPDKFHGLTDQEVRYRQRYLDLISNEESRRTFIIRSK 185
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR + FMEVETP+L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 186 VVAGIREYFISKGFMEVETPMLQVIPGGASARPFVTHHNALDVDMYLRIAPELYLKRLVV 245
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTM+E+Y AY +Y LM TE++++K+ +D +GTT
Sbjct: 246 GGFERVFELNRNFRNEGVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTT 305
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI--DLQNKLFLKSELKKINPKFNQKKI 297
+ Y DF K FE++T+ +A KY + DL + K+ +++ + +
Sbjct: 306 IVKYGEYEFDFGKPFERITLHDATVKYGADKGIVKEDLYDFDRAKATAERLGIEVQKSWG 365
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L ++ I FEE E L PT++ +P EISPLAR+ N EN ++T+RFELFI G
Sbjct: 366 LGSIVNAI-----FEEVAEHHLIQPTFLMAHPAEISPLARR-NDENPDVTDRFELFIGGR 419
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND E+Q+ RF Q+ K E + + + D D++ ALE+G+PP +G G+G+D
Sbjct: 420 EIGNGFSELNDAEDQNERFDAQVAAK-EAGDDEAMFKDEDFVVALEHGLPPTAGEGLGID 478
Query: 418 RLIMLLTNSKNIRDVILFPHLRN 440
RL ML N+ +IRDVILFP +R
Sbjct: 479 RLAMLYANAPSIRDVILFPAMRQ 501
>gi|229846241|ref|ZP_04466353.1| lysyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
gi|229811245|gb|EEP46962.1| lysyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
Length = 502
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 214/443 (48%), Positives = 308/443 (69%), Gaps = 15/443 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLY-TDFKNYDIGDIIGAKGTLF 59
M +R MGK +FI +QD SG KIQLY++ + + +++Y D +D+GDIIG KGTLF
Sbjct: 71 MTRRAMGKATFITIQDMSG-----KIQLYVARDNLPEDVYKDDVGTWDLGDIIGVKGTLF 125
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL++K + ++L+TK+LRPLP+KF L++QE +YR RY+DLI NE +R+ F R++
Sbjct: 126 KTKTDELTVKTTEVQLLTKALRPLPDKFHGLTDQEARYRQRYLDLISNEESRRTFIIRSK 185
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR + FMEVETP+L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 186 VVAGIREYFISKGFMEVETPMLQVIPGGASARPFVTHHNALDVDMYLRIAPELYLKRLVV 245
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTM+E+Y AY +Y LM TE++++K+ +D +GTT
Sbjct: 246 GGFERVFELNRNFRNEGVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTT 305
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI--DLQNKLFLKSELKKINPKFNQKKI 297
+ Y DF K FE++T+ +A KY + DL + K+ +++ + +
Sbjct: 306 IVKYGDLEFDFGKPFERITLHDATVKYGADKGIVKEDLYDFDRAKATAERLGIEVQKSWG 365
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L ++ I FEE E L PT++ +P EISPLAR+ N EN ++T+RFELFI G
Sbjct: 366 LGSIVNAI-----FEEVAEHHLVQPTFLMAHPAEISPLARR-NDENPDVTDRFELFIGGR 419
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND E+Q+ RF Q+ K E + + + D D++ ALE+G+PP +G G+G+D
Sbjct: 420 EIGNGFSELNDAEDQNERFDAQVAAK-EAGDDEAMFKDEDFVVALEHGLPPTAGEGLGID 478
Query: 418 RLIMLLTNSKNIRDVILFPHLRN 440
RL ML N+ +IRDVILFP +R
Sbjct: 479 RLAMLYANAPSIRDVILFPAMRQ 501
>gi|229844834|ref|ZP_04464972.1| lysyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
gi|229812215|gb|EEP47906.1| lysyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
Length = 502
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 215/443 (48%), Positives = 308/443 (69%), Gaps = 15/443 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYT-DFKNYDIGDIIGAKGTLF 59
M +R MGK +FI +QD SG KIQLY++ + + + +Y D N+D+GDIIG KGTLF
Sbjct: 71 MTRRAMGKATFITIQDMSG-----KIQLYVARDNLPEGVYAEDVGNWDLGDIIGVKGTLF 125
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL+IK + ++L+TK+LRPLP+KF L++QE++YR RY+DLI NE +R+ F R++
Sbjct: 126 KTKTNELTIKTTEVQLLTKALRPLPDKFHGLTDQEVRYRQRYLDLISNEESRRTFIIRSK 185
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR + FMEVETP+L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 186 VVAGIREYFISKGFMEVETPMLQVIPGGASARPFVTHHNALDVDMYLRIAPELYLKRLVV 245
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTM+E+Y AY +Y LM TE++++K+ +D + TT
Sbjct: 246 GGFERVFELNRNFRNEGVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILSTT 305
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI--DLQNKLFLKSELKKINPKFNQKKI 297
+ Y DF K FE++T+ +A KY + DL + K+ +++ + +
Sbjct: 306 IVKYGEYEFDFGKPFERITLHDATIKYGADKGIVKEDLYDFNRAKATAERLGIEVQKSWG 365
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L ++ I FEE E L PT++ +P EISPLAR+ N EN ++T+RFELFI G
Sbjct: 366 LGSIVNAI-----FEEVAEHHLIQPTFLMAHPAEISPLARR-NDENPDVTDRFELFIGGR 419
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND E+Q+ RF Q+ K E + + + D D++ ALE+G+PP +G G+G+D
Sbjct: 420 EIGNGFSELNDAEDQNERFDAQVAAK-EAGDDEAMFKDDDFVVALEHGLPPTAGEGLGID 478
Query: 418 RLIMLLTNSKNIRDVILFPHLRN 440
RL ML N+ +IRDVILFP +R
Sbjct: 479 RLAMLYANASSIRDVILFPAMRQ 501
>gi|145639268|ref|ZP_01794874.1| lysyl-tRNA synthetase [Haemophilus influenzae PittII]
gi|145271571|gb|EDK11482.1| lysyl-tRNA synthetase [Haemophilus influenzae PittII]
Length = 502
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 214/443 (48%), Positives = 308/443 (69%), Gaps = 15/443 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLY-TDFKNYDIGDIIGAKGTLF 59
M +R MGK +FI +QD SG KIQLY++ + + + +Y D +D+GDIIG KGTLF
Sbjct: 71 MTRRAMGKATFITIQDMSG-----KIQLYVARDNLPEGVYKDDVGTWDLGDIIGVKGTLF 125
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL++K + ++L+TK+LRPLP+KF L++QE++YR RY+DLI NE +R+ F R++
Sbjct: 126 KTKTDELTVKTTEVQLLTKALRPLPDKFHGLTDQEVRYRQRYLDLISNEESRRTFIIRSK 185
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR + FMEVETP+L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 186 VVAGIREYFISKGFMEVETPMLQVIPGGASARPFVTHHNALDVDMYLRIAPELYLKRLVV 245
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTM+E+Y AY +Y LM TE++++K+ +D +GTT
Sbjct: 246 GGFERVFELNRNFRNEGVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTT 305
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI--DLQNKLFLKSELKKINPKFNQKKI 297
+ Y DF K FE++T+ +A KY + DL + K+ +++ + +
Sbjct: 306 IVKYGEYEFDFGKPFERITLHDATIKYGADKGIVKEDLYDFDRAKATAERLGIEVQKSWG 365
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L ++ I FEE E L PT++ +P EISPLAR+ N EN ++T+RFELFI G
Sbjct: 366 LGSIVNAI-----FEEVAEHHLIQPTFLMAHPAEISPLARR-NDENPDVTDRFELFIGGR 419
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND E+Q+ RF Q+ K E + + + D D++ ALE+G+PP +G G+G+D
Sbjct: 420 EIGNGFSELNDAEDQNERFDAQVTAK-EAGDDEAMFKDEDFVVALEHGLPPTAGEGLGID 478
Query: 418 RLIMLLTNSKNIRDVILFPHLRN 440
RL ML N+ +IRDVILFP +R
Sbjct: 479 RLAMLYANAPSIRDVILFPAMRQ 501
>gi|15617036|ref|NP_240249.1| lysyl-tRNA synthetase [Buchnera aphidicola str. APS (Acyrthosiphon
pisum)]
gi|219681788|ref|YP_002468174.1| lysyl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon
pisum)]
gi|257471490|ref|ZP_05635489.1| lysyl-tRNA synthetase [Buchnera aphidicola str. LSR1 (Acyrthosiphon
pisum)]
gi|11134965|sp|P57512.1|SYK_BUCAI RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|25293056|pir||G84980 lysine-tRNA ligase (EC 6.1.1.6) [imported] - Buchnera sp. (strain
APS)
gi|10039101|dbj|BAB13135.1| lysyl-tRNA synthetase [Buchnera aphidicola str. APS (Acyrthosiphon
pisum)]
gi|219624631|gb|ACL30786.1| lysyl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon
pisum)]
Length = 506
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 236/439 (53%), Positives = 307/439 (69%), Gaps = 15/439 (3%)
Query: 3 KRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYT-DFKNYDIGDIIGAKGTLFKT 61
+R+MGK SF LQD G KIQ+YI+ + I + Y FK +DIGDI+G GTLFKT
Sbjct: 77 RRIMGKASFFTLQDIEG-----KIQIYINEKKISSDFYRFHFKKWDIGDILGVIGTLFKT 131
Query: 62 NTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQII 121
TGELSI ++ ++ KSL+PLP+KF LSNQEI+YR RY+DLI N +FK R+ II
Sbjct: 132 KTGELSIYCKNVTILNKSLKPLPDKFHGLSNQEIRYRKRYLDLISNNKLYSIFKNRSNII 191
Query: 122 SSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGG 181
++IR+FM +NDF+EVETP+L N PGGA A+PFIT+HN ++ +M+LRIAPELYLK+LIIGG
Sbjct: 192 TAIRNFMIENDFLEVETPMLQNIPGGANARPFITYHNEIDSQMYLRIAPELYLKKLIIGG 251
Query: 182 FNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKI 241
F +IFE+N+NFRNEG+S RHNPEFTM+E Y AY+NY +M+ TE + K I KI
Sbjct: 252 FERIFELNRNFRNEGVSARHNPEFTMMEAYIAYSNYEDMMELTENLFKSITKFLFQDNKI 311
Query: 242 DYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNNL 301
+ DFS+ F +LT+ ++I ++ DL++ ++ K I K +K +
Sbjct: 312 IFNNNNFDFSQPFRRLTMTDSILEFNSTITSSDLKDFYKIREFAKSIGIKVEKKWGCGQI 371
Query: 302 KKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIAN 361
+ +I FE+T E KL PT+IT YP E+SPLAR+++I N NIT+RFELFI G EI N
Sbjct: 372 ETEI-----FEKTVEKKLIQPTFITQYPVEVSPLARRNDI-NLNITDRFELFIGGYEIGN 425
Query: 362 GFSELNDPEEQSVRFKNQIDLKN-EINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
GFSELND E+Q RF NQI N E N L +YD +YI AL+YG+PP SG GIG+DRLI
Sbjct: 426 GFSELNDVEDQKTRFLNQIQKSNKEDNKNL--FYDKEYIEALKYGLPPTSGLGIGIDRLI 483
Query: 421 MLLTNSKNIRDVILFPHLR 439
M+LTN +IRDVILFP LR
Sbjct: 484 MILTNQISIRDVILFPTLR 502
>gi|145635060|ref|ZP_01790766.1| lysyl-tRNA synthetase [Haemophilus influenzae PittAA]
gi|145267668|gb|EDK07666.1| lysyl-tRNA synthetase [Haemophilus influenzae PittAA]
Length = 502
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 213/443 (48%), Positives = 307/443 (69%), Gaps = 15/443 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLY-TDFKNYDIGDIIGAKGTLF 59
M +R MGK +FI +QD SG KIQLY++ + + + +Y D +D+GDI+G KGTLF
Sbjct: 71 MTRRAMGKATFITIQDMSG-----KIQLYVARDNLPEGVYKDDVGTWDLGDIVGVKGTLF 125
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL++K + ++L+TK+LRPLP+KF L++QE++YR RY+DLI NE +R+ F R++
Sbjct: 126 KTKTDELTVKTTEVQLLTKALRPLPDKFHGLTDQEVRYRQRYLDLISNEESRRTFIIRSK 185
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR + FMEVETP+L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 186 VVAGIREYFISKGFMEVETPMLQVIPGGASARPFVTHHNALDVDMYLRIAPELYLKRLVV 245
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTM+E+Y AY +Y LM TE++++K+ +D +GTT
Sbjct: 246 GGFERVFELNRNFRNEGVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTT 305
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI--DLQNKLFLKSELKKINPKFNQKKI 297
+ Y DF K FE++T+ +A KY + DL + K+ +++ + +
Sbjct: 306 IVKYGDLEFDFGKPFERITLHDATVKYGADKGIVKEDLYDFDRAKATAERLGIEVQKSWG 365
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L ++ I FEE E L PT++ +P EISPLAR+ N EN +T+RFELFI G
Sbjct: 366 LGSIVNAI-----FEEVAEHHLIQPTFLMAHPAEISPLARR-NDENPEVTDRFELFIGGR 419
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND E+Q+ RF Q+ K E + + + D D++ ALE+G+PP +G G+G+D
Sbjct: 420 EIGNGFSELNDAEDQNERFDAQVAAK-EAGDDEAMFKDEDFVVALEHGLPPTAGEGLGID 478
Query: 418 RLIMLLTNSKNIRDVILFPHLRN 440
RL ML N+ +IRDVILFP +R
Sbjct: 479 RLAMLYANAPSIRDVILFPAMRQ 501
>gi|110834509|ref|YP_693368.1| lysyl-tRNA synthetase [Alcanivorax borkumensis SK2]
gi|110647620|emb|CAL17096.1| Lysyl-tRNA synthetase [Alcanivorax borkumensis SK2]
Length = 504
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 208/437 (47%), Positives = 307/437 (70%), Gaps = 13/437 (2%)
Query: 3 KRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
+ ++ + +F +LQD SG +IQ++ + +++ + K++D+GDIIG +GTL K+
Sbjct: 77 RMMLDRKAFKVLQDMSG-----RIQIFAPKDET-RDVRKETKSWDLGDIIGVRGTLCKSG 130
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + L+TKSLRPLP K + L++ E +YR RY+DLI+NE+TRK F+ R +I++
Sbjct: 131 KGDLYVMMDEYFLLTKSLRPLPEKHKGLTDTEARYRQRYVDLIVNEDTRKTFQIRAKIVA 190
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
IR+F+ + DF+E ETP+L PGGA A+PFITHHNSL+M M+LRIAPELYLKRL++GGF
Sbjct: 191 GIRNFLVQKDFVEAETPMLQVIPGGATARPFITHHNSLDMDMYLRIAPELYLKRLVVGGF 250
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
K+FEIN+NFRNEG+S RHNPEFTM+EFY A+ +Y LM TE+M++ + +G+T +
Sbjct: 251 EKVFEINRNFRNEGLSTRHNPEFTMLEFYQAFGDYHDLMNLTEEMLRTLAETVLGSTDVA 310
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNNLK 302
YQG + DF K F ++T+ ++I + P + L + + + L
Sbjct: 311 YQGDVFDFGKPFTRMTVFDSILHFNPDIDAAKLADIEGAREIATGLGIPLKDGYGLGK-- 368
Query: 303 KDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIANG 362
+Q+ +FE+T E +L +PT+IT YPTE+SPLAR+ + +N +TERFE F+ G EIANG
Sbjct: 369 ---VQIEIFEKTVEHRLKDPTFITEYPTEVSPLARRMD-DNPFVTERFEFFVGGREIANG 424
Query: 363 FSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLIML 422
FSELND E+Q+ RF+ Q++ K + E + +YD DY+ ALE+G+PP +G GIG+DRL+ML
Sbjct: 425 FSELNDAEDQAERFRQQVEEKAAGDDE-AMFYDEDYVVALEHGLPPTAGEGIGIDRLVML 483
Query: 423 LTNSKNIRDVILFPHLR 439
T++ +IRDVILFPH+R
Sbjct: 484 FTDAPSIRDVILFPHMR 500
>gi|417839066|ref|ZP_12485273.1| Lysyl-tRNA synthetase [Haemophilus haemolyticus M19107]
gi|341955164|gb|EGT81626.1| Lysyl-tRNA synthetase [Haemophilus haemolyticus M19107]
Length = 502
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 213/443 (48%), Positives = 308/443 (69%), Gaps = 15/443 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLY-TDFKNYDIGDIIGAKGTLF 59
M +R MGK +FI +QD SG KIQLY++ + + + +Y D +D+GDI+G KGTLF
Sbjct: 71 MTRRAMGKATFITIQDMSG-----KIQLYVARDNLPEGVYKDDVGTWDLGDIVGVKGTLF 125
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL++K + ++L+TK+LRPLP+KF L++QE++YR RY+DLI NE +R+ F R++
Sbjct: 126 KTKTDELTVKTTEVQLLTKALRPLPDKFHGLTDQEVRYRQRYLDLISNEESRRTFIIRSK 185
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR + FMEVETP+L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 186 VVAGIREYFISKGFMEVETPMLQVIPGGASARPFVTHHNALDVDMYLRIAPELYLKRLVV 245
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTM+E+Y AY +Y LM TE++++K+ +D +GTT
Sbjct: 246 GGFERVFELNRNFRNEGVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTT 305
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI--DLQNKLFLKSELKKINPKFNQKKI 297
+ Y DF K FE++T+ +A KY + DL + K+ +++ + +
Sbjct: 306 IVKYGEYEFDFGKPFERITLHDATIKYGADKGIVKEDLYDFDRAKATAERLGIEVQKSWG 365
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L ++ I FEE E L PT++ +P EISPLAR+ N EN ++T+RFELFI G
Sbjct: 366 LGSIVNAI-----FEEVAEHHLIQPTFLMAHPAEISPLARR-NDENPDVTDRFELFIGGR 419
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND E+Q+ RF Q+ K E + + + D D++ ALE+G+PP +G G+G+D
Sbjct: 420 EIGNGFSELNDAEDQNERFDAQVAAK-EAGDDEAMFKDEDFVVALEHGLPPTAGEGLGID 478
Query: 418 RLIMLLTNSKNIRDVILFPHLRN 440
RL ML N+ +IRDVILFP +R
Sbjct: 479 RLAMLYANAPSIRDVILFPAMRQ 501
>gi|418464446|ref|ZP_13035386.1| lysyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans RhAA1]
gi|359757242|gb|EHK91398.1| lysyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans RhAA1]
Length = 502
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 212/443 (47%), Positives = 308/443 (69%), Gaps = 15/443 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLY-TDFKNYDIGDIIGAKGTLF 59
M +R MGK +FI +QD SG KIQLY++ + + + +Y D ++D+GDI+G KG LF
Sbjct: 71 MTRRAMGKATFITIQDMSG-----KIQLYVARDNLPEGVYKDDVGHWDLGDIVGIKGALF 125
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL++K + ++L+TK+LRPLP+KF L++QE++YR RY+DLI NE +R+ F R++
Sbjct: 126 KTKTDELTVKATEIQLLTKALRPLPDKFHGLTDQEVRYRQRYLDLISNEESRRTFIIRSK 185
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR + FMEVETP+L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 186 VVAGIREYFLSKGFMEVETPMLQVIPGGAAARPFVTHHNALDVDMYLRIAPELYLKRLVV 245
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTM+E+Y AY +Y LM TE++++K+ +D +GTT
Sbjct: 246 GGFERVFELNRNFRNEGVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTT 305
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI--DLQNKLFLKSELKKINPKFNQKKI 297
+ Y DF K FE++T+ +A KY + + DL + K+ +++ + +
Sbjct: 306 IVKYGDLEFDFGKPFERITLHDATIKYGAEKGIVKEDLYDFDRAKATAERLGIEVQKSWG 365
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L ++ I FEE E L PT++ +P EISPLAR+ N EN +T+RFELFI G
Sbjct: 366 LGSIVNAI-----FEEVAEHHLIQPTFLMAHPAEISPLARR-NDENPEVTDRFELFIGGR 419
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND E+Q+ RF Q+ K E + + + D D++ ALE+G+PP +G G+G+D
Sbjct: 420 EIGNGFSELNDAEDQNDRFDAQVAAK-EAGDDEAMFKDEDFVVALEHGLPPTAGEGLGID 478
Query: 418 RLIMLLTNSKNIRDVILFPHLRN 440
RL ML N+ +IRDVILFP +R
Sbjct: 479 RLAMLYANAPSIRDVILFPAMRQ 501
>gi|419839921|ref|ZP_14363321.1| lysine--tRNA ligase [Haemophilus haemolyticus HK386]
gi|386908659|gb|EIJ73346.1| lysine--tRNA ligase [Haemophilus haemolyticus HK386]
Length = 502
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 214/443 (48%), Positives = 308/443 (69%), Gaps = 15/443 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLY-TDFKNYDIGDIIGAKGTLF 59
M +R MGK +FI +QD SG KIQLY++ + + + +Y D +D+GDIIG KGTLF
Sbjct: 71 MTRRAMGKATFITIQDMSG-----KIQLYVARDNLPEGVYKDDVGTWDLGDIIGVKGTLF 125
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL++K + ++L+TK+LRPLP+KF L++QE++YR RY+DLI NE +R+ F R++
Sbjct: 126 KTKTDELTVKTTKVQLLTKALRPLPDKFHGLTDQEVRYRQRYLDLISNEESRRTFIIRSK 185
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR + FMEVETP+L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 186 VVAGIREYFISKGFMEVETPMLQVIPGGASARPFVTHHNALDVDMYLRIAPELYLKRLVV 245
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTM+E+Y AY +Y LM TE++++K+ +D +GTT
Sbjct: 246 GGFERVFELNRNFRNEGVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTT 305
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI--DLQNKLFLKSELKKINPKFNQKKI 297
+ Y DF K FE++T+ +A KY + DL + K+ +++ + +
Sbjct: 306 IVKYGEYEFDFGKPFERITLHDATIKYGADKGIVKEDLYDFDRAKATAERLGIEVQKSWG 365
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L ++ I FEE E L PT++ +P EISPLAR+ N EN ++T+RFELFI G
Sbjct: 366 LGSIVNAI-----FEEVAEHHLIQPTFLMAHPAEISPLARR-NDENPDVTDRFELFIGGR 419
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND E+Q+ RF Q+ K E + + + D D++ ALE+G+PP +G G+G+D
Sbjct: 420 EIGNGFSELNDAEDQNERFDAQVAAK-EAGDDEAMFKDEDFVVALEHGLPPTAGEGLGID 478
Query: 418 RLIMLLTNSKNIRDVILFPHLRN 440
RL ML N+ +IRDVILFP +R
Sbjct: 479 RLAMLYANAPSIRDVILFPAMRQ 501
>gi|392542981|ref|ZP_10290118.1| lysyl-tRNA ligase [Pseudoalteromonas piscicida JCM 20779]
gi|409201544|ref|ZP_11229747.1| lysyl-tRNA ligase [Pseudoalteromonas flavipulchra JG1]
Length = 516
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 219/450 (48%), Positives = 307/450 (68%), Gaps = 33/450 (7%)
Query: 11 FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTNTGELSIKV 70
F++LQD G +IQ Y S ++ K+L + DIGDI+G KG L K+ G+L + +
Sbjct: 76 FLVLQDMKG-----RIQAYASKDV-QKDLKEKYGQLDIGDIVGVKGPLHKSGKGDLYVDM 129
Query: 71 SSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIISSIRHFMEK 130
+L+TKSLRPLP KF L++QE KYR RY+DLI N +TR+ F+ R+++I IR F+ +
Sbjct: 130 VEYELLTKSLRPLPEKFHGLTDQEAKYRQRYVDLITNMDTRETFRIRSKVIEGIRRFLAE 189
Query: 131 NDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGFNKIFEINK 190
DFMEVETP+L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++GGF+++FEIN+
Sbjct: 190 RDFMEVETPMLQVIPGGASARPFVTHHNALDIDMYLRIAPELYLKRLVVGGFDRVFEINR 249
Query: 191 NFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKI-----DYQG 245
NFRNEG+S RHNPEFTMIEFY AY +Y LM TE M++ + D +GTT + + +G
Sbjct: 250 NFRNEGLSTRHNPEFTMIEFYQAYADYNDLMNLTEDMLRTVAQDVLGTTTVVNTVKNAEG 309
Query: 246 RLL-----DFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLF---------LKSELKKINPK 291
+ DF +F++L++ +AI +Y P + + Q ++F LK+ KK++ K
Sbjct: 310 EVTETIEYDFGSAFQRLSMADAILQYGP---DAEAQAEIFKDPENHFEALKAYAKKVHVK 366
Query: 292 FNQKKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFE 351
+ + K +FEE E +L PT+IT YP E+SPLAR+ N EN IT+RFE
Sbjct: 367 IPENCVWGPGK---FLCEIFEEVAEHRLIQPTFITEYPWEVSPLARR-NDENPFITDRFE 422
Query: 352 LFIIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASG 411
F+ G E+ANGFSELND E+Q+ RF Q++ K+ + E + +YD DYI ALE+G+PP +G
Sbjct: 423 FFVGGRELANGFSELNDAEDQAARFARQVEEKDAGDDE-AMHYDADYIRALEHGLPPTAG 481
Query: 412 CGIGVDRLIMLLTNSKNIRDVILFPHLRNE 441
GIG+DRL+ML T+S I+DVILFPH+R E
Sbjct: 482 EGIGIDRLVMLFTDSPTIKDVILFPHMRPE 511
>gi|386266090|ref|YP_005829582.1| lysyl-tRNA synthetase [Haemophilus influenzae R2846]
gi|417843403|ref|ZP_12489478.1| Lysyl-tRNA synthetase [Haemophilus haemolyticus M21127]
gi|309973326|gb|ADO96527.1| Lysyl-tRNA synthetase [Haemophilus influenzae R2846]
gi|341949882|gb|EGT76481.1| Lysyl-tRNA synthetase [Haemophilus haemolyticus M21127]
Length = 502
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 213/443 (48%), Positives = 308/443 (69%), Gaps = 15/443 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLY-TDFKNYDIGDIIGAKGTLF 59
M +R MGK +FI +QD SG KIQLY++ + + + +Y D +D+GDI+G KGTLF
Sbjct: 71 MTRRAMGKATFITIQDMSG-----KIQLYVARDNLPEGVYKDDVGTWDLGDIVGVKGTLF 125
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL++K + ++L+TK+LRPLP+KF L++QE++YR RY+DLI NE +R+ F R++
Sbjct: 126 KTKTDELTVKTTEVQLLTKALRPLPDKFHGLTDQEVRYRQRYLDLISNEESRRTFIIRSK 185
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR + FMEVETP+L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 186 VVAGIREYFISKGFMEVETPMLQVIPGGASARPFVTHHNALDVDMYLRIAPELYLKRLVV 245
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTM+E+Y AY +Y LM TE++++K+ +D +GTT
Sbjct: 246 GGFERVFELNRNFRNEGVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTT 305
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI--DLQNKLFLKSELKKINPKFNQKKI 297
+ Y DF K FE++T+ +A KY + DL + K+ +++ + +
Sbjct: 306 IVKYGEYEFDFGKPFERITLHDATIKYGADKGIVKEDLYDFDRAKATAERLGIEVQKSWG 365
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L ++ I FEE E L PT++ +P EISPLAR+ N EN ++T+RFELFI G
Sbjct: 366 LGSIVNAI-----FEEVAEHHLIQPTFLMAHPAEISPLARR-NDENPDVTDRFELFIGGR 419
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND E+Q+ RF Q+ K E + + + D D++ ALE+G+PP +G G+G+D
Sbjct: 420 EIGNGFSELNDAEDQNERFDAQVAAK-EAGDDEAMFKDEDFVVALEHGLPPTAGEGLGID 478
Query: 418 RLIMLLTNSKNIRDVILFPHLRN 440
RL ML N+ +IRDVILFP +R
Sbjct: 479 RLAMLYANAPSIRDVILFPAMRQ 501
>gi|145631261|ref|ZP_01787034.1| lysyl-tRNA synthetase [Haemophilus influenzae R3021]
gi|144983188|gb|EDJ90683.1| lysyl-tRNA synthetase [Haemophilus influenzae R3021]
Length = 502
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 214/443 (48%), Positives = 308/443 (69%), Gaps = 15/443 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLY-TDFKNYDIGDIIGAKGTLF 59
M +R MGK +FI +QD SG KIQLYI+ + + + +Y D +D+GDI+G KGTLF
Sbjct: 71 MTRRAMGKATFITIQDMSG-----KIQLYIARDNLPEGVYKDDVGTWDLGDIVGVKGTLF 125
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL++K + ++L+TK+LRPLP+KF L++QE++YR RY+DLI NE +R+ F R++
Sbjct: 126 KTKTDELTVKTTEVQLLTKALRPLPDKFHGLTDQEVRYRQRYLDLISNEESRRTFIIRSK 185
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR + FMEVETP+L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 186 VVAGIREYFISKGFMEVETPMLQVIPGGASARPFVTHHNALDVDMYLRIAPELYLKRLVV 245
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTM+E+Y AY +Y LM TE++++K+ +D +GTT
Sbjct: 246 GGFERVFELNRNFRNEGVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTT 305
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI--DLQNKLFLKSELKKINPKFNQKKI 297
+ Y DF K FE++T+ +A KY + DL + K+ +++ + +
Sbjct: 306 IVKYGEYEFDFGKPFERITLHDATIKYGADKGIVKEDLYDFDRAKATAERLGIEVQKSWG 365
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L ++ I FEE E L PT++ +P EISPLAR+ N EN ++T+RFELFI G
Sbjct: 366 LGSIVNAI-----FEEVAEHHLIQPTFLMAHPAEISPLARR-NDENPDVTDRFELFIGGR 419
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND E+Q+ RF Q+ K E + + + D D++ ALE+G+PP +G G+G+D
Sbjct: 420 EIGNGFSELNDAEDQNERFDAQVTAK-EAGDDEAMFKDEDFVVALEHGLPPTAGEGLGID 478
Query: 418 RLIMLLTNSKNIRDVILFPHLRN 440
RL ML N+ +IRDVILFP +R
Sbjct: 479 RLAMLYANAPSIRDVILFPAMRQ 501
>gi|387120079|ref|YP_006285962.1| lysyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D7S-1]
gi|416034190|ref|ZP_11573267.1| lysyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype a str. H5P1]
gi|416070076|ref|ZP_11583519.1| lysyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype f str. D18P1]
gi|429735041|ref|ZP_19269036.1| lysine--tRNA ligase [Aggregatibacter actinomycetemcomitans Y4]
gi|347998453|gb|EGY39380.1| lysyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype a str. H5P1]
gi|347999281|gb|EGY40124.1| lysyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype f str. D18P1]
gi|385874571|gb|AFI86130.1| lysyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D7S-1]
gi|429150602|gb|EKX93506.1| lysine--tRNA ligase [Aggregatibacter actinomycetemcomitans Y4]
Length = 502
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 213/443 (48%), Positives = 309/443 (69%), Gaps = 15/443 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLY-TDFKNYDIGDIIGAKGTLF 59
M +R MGK +FI +QD SG KIQLY++ + + + +Y D ++D+GDI+G KG+LF
Sbjct: 71 MTRRAMGKATFITIQDMSG-----KIQLYVARDNLPEGVYKDDVGHWDLGDIVGIKGSLF 125
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL++K + ++L+TK+LRPLP+KF L++QE++YR RY+DLI NE +R+ F R++
Sbjct: 126 KTKTDELTVKATEVQLLTKALRPLPDKFHGLTDQEVRYRQRYLDLISNEESRRTFIIRSK 185
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR + FMEVETP+L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 186 VVAGIREYFLSKGFMEVETPMLQVIPGGAAARPFVTHHNALDVDMYLRIAPELYLKRLVV 245
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTM+E+Y AY +Y LM TE++++K+ +D +GTT
Sbjct: 246 GGFERVFELNRNFRNEGVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTT 305
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI--DLQNKLFLKSELKKINPKFNQKKI 297
+ Y DF K FE++T+ AI KY + + DL + K+ +++ + +
Sbjct: 306 IVKYGDLEFDFGKPFERITLHNAIIKYGSEKGIVKEDLYDFDRAKATAERLGIEVQKSWG 365
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L ++ I FEE E L PT++ +P EISPLAR+ N EN +T+RFELFI G
Sbjct: 366 LGSIVNAI-----FEEVAEHHLIQPTFLMAHPAEISPLARR-NDENPEVTDRFELFIGGR 419
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND E+Q+ RF Q+ K E + + + D D++ ALE+G+PP +G G+G+D
Sbjct: 420 EIGNGFSELNDAEDQNDRFDAQVAAK-EAGDDEAMFKDEDFVIALEHGLPPTAGEGLGID 478
Query: 418 RLIMLLTNSKNIRDVILFPHLRN 440
RL ML N+ +IRDVILFP +R
Sbjct: 479 RLAMLYANAPSIRDVILFPAMRQ 501
>gi|416053111|ref|ZP_11578722.1| lysyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype e str. SC1083]
gi|347991411|gb|EGY32887.1| lysyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype e str. SC1083]
Length = 502
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 212/443 (47%), Positives = 308/443 (69%), Gaps = 15/443 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLY-TDFKNYDIGDIIGAKGTLF 59
M +R MGK +FI +QD SG KIQLY++ + + + +Y D ++D+GDI+G KG LF
Sbjct: 71 MTRRAMGKATFITIQDMSG-----KIQLYVARDNLPEGVYKDDVGHWDLGDIVGIKGALF 125
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL++K + ++L+TK+LRPLP+KF L++QE++YR RY+DLI NE +R+ F R++
Sbjct: 126 KTKTNELTVKATEIQLLTKALRPLPDKFHGLTDQEVRYRQRYLDLISNEESRRTFIIRSK 185
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR + FMEVETP+L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 186 VVAGIREYFLSKGFMEVETPMLQVIPGGAAARPFVTHHNALDVDMYLRIAPELYLKRLVV 245
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTM+E+Y AY +Y LM TE++++K+ +D +GTT
Sbjct: 246 GGFERVFELNRNFRNEGVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLALDILGTT 305
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI--DLQNKLFLKSELKKINPKFNQKKI 297
+ Y DF K FE++T+ +A KY + + DL + K+ +++ + +
Sbjct: 306 IVKYGDLEFDFGKPFERITLHDATIKYGAEKGIVKEDLYDFDRAKATAERLGIEVQKSWG 365
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L ++ I FEE E L PT++ +P EISPLAR+ N EN +T+RFELFI G
Sbjct: 366 LGSIVNAI-----FEEVAEHHLIQPTFLMAHPAEISPLARR-NDENPEVTDRFELFIGGR 419
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND E+Q+ RF Q+ K E + + + D D++ ALE+G+PP +G G+G+D
Sbjct: 420 EIGNGFSELNDAEDQNDRFDAQVAAK-EAGDDEAMFKDEDFVVALEHGLPPTAGEGLGID 478
Query: 418 RLIMLLTNSKNIRDVILFPHLRN 440
RL ML N+ +IRDVILFP +R
Sbjct: 479 RLAMLYANAPSIRDVILFPAMRQ 501
>gi|417845722|ref|ZP_12491748.1| Lysyl-tRNA synthetase [Haemophilus haemolyticus M21639]
gi|341954791|gb|EGT81264.1| Lysyl-tRNA synthetase [Haemophilus haemolyticus M21639]
Length = 502
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 215/443 (48%), Positives = 306/443 (69%), Gaps = 15/443 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLY-TDFKNYDIGDIIGAKGTLF 59
M +R MGK +FI +QD SG KIQLY+ + + + +Y D +D+GDIIG KGTLF
Sbjct: 71 MTRRAMGKATFITIQDMSG-----KIQLYVVRDNLPEGVYKDDVGTWDLGDIIGVKGTLF 125
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL++K + ++L+TK+LRPLP+KF L++QE++YR RY+DLI NE +R+ F R++
Sbjct: 126 KTKTDELTVKTTEVQLLTKALRPLPDKFHGLTDQEVRYRQRYLDLISNEESRRTFIIRSK 185
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR + FMEVETP+L PGGA A+PF+THHN+L+ M+LRIAPELYLKRL++
Sbjct: 186 VVAGIREYFISKGFMEVETPMLQVIPGGASARPFVTHHNALDADMYLRIAPELYLKRLVV 245
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTM+E+Y AY +Y LM TE++++K+ +D +GTT
Sbjct: 246 GGFERVFELNRNFRNEGVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTT 305
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI--DLQNKLFLKSELKKINPKFNQKKI 297
+ Y DF K FE++T+ +A KY + DL + K+ K++ + +
Sbjct: 306 IVKYGEYEFDFGKPFERITLHDATIKYGADKGIVKEDLYDFDRAKATAKRLGIEVQKSWG 365
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L ++ I FEE E L PT++ +P EISPLAR+ N EN ++T+RFELFI G
Sbjct: 366 LGSIVNAI-----FEEVAEHHLIQPTFLMAHPAEISPLARR-NDENPDVTDRFELFIGGR 419
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND E+Q+ RF Q+ K E + + + D D++ ALE+G+PP +G G+G+D
Sbjct: 420 EIGNGFSELNDAEDQNERFDAQVAAK-EAGDDEAMFKDEDFVVALEHGLPPTAGEGLGID 478
Query: 418 RLIMLLTNSKNIRDVILFPHLRN 440
RL ML N+ +IRDVILFP +R
Sbjct: 479 RLAMLYANAPSIRDVILFPAMRQ 501
>gi|414562792|ref|YP_005617983.1| lysyl-tRNA synthetase [Buchnera aphidicola str. JF99 (Acyrthosiphon
pisum)]
gi|311087328|gb|ADP67408.1| lysyl-tRNA synthetase [Buchnera aphidicola str. JF99 (Acyrthosiphon
pisum)]
Length = 506
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 236/439 (53%), Positives = 307/439 (69%), Gaps = 15/439 (3%)
Query: 3 KRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYT-DFKNYDIGDIIGAKGTLFKT 61
+R+MGK SF LQD G KIQ+YI+ + I + Y FK +DIGDI+G GTLFKT
Sbjct: 77 RRIMGKASFFTLQDIEG-----KIQIYINEKKISSDFYRFHFKKWDIGDILGVIGTLFKT 131
Query: 62 NTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQII 121
TGELSI ++ ++ KSL+PLP+KF LSNQEI+YR RY+DLI N +FK R+ II
Sbjct: 132 KTGELSIYCKNVTILNKSLKPLPDKFHGLSNQEIRYRKRYLDLISNNKLYSIFKNRSNII 191
Query: 122 SSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGG 181
++IR+FM +NDF+EVETP+L N PGGA A+PFIT+HN ++ +M+LRIAPELYLK+LIIGG
Sbjct: 192 TAIRNFMIENDFLEVETPMLQNIPGGANARPFITYHNEIDSQMYLRIAPELYLKKLIIGG 251
Query: 182 FNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKI 241
F +IFE+N+NFRNEG+S RHNPEFTM+E Y AY+NY +M+ TE + K I KI
Sbjct: 252 FERIFELNRNFRNEGVSARHNPEFTMMEAYIAYSNYEDMMELTENLFKNITKFLFQDNKI 311
Query: 242 DYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNNL 301
+ DFS+ F +LT+ ++I ++ DL++ ++ K I K +K +
Sbjct: 312 IFNNNNFDFSQPFRRLTMTDSILEFNSTITSSDLKDFYKIREFAKSIGIKVEKKWGCGQI 371
Query: 302 KKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIAN 361
+ +I FE+T E KL PT+IT YP E+SPLAR+++I N NIT+RFELFI G EI N
Sbjct: 372 ETEI-----FEKTVEKKLIQPTFITQYPVEVSPLARRNDI-NLNITDRFELFIGGYEIGN 425
Query: 362 GFSELNDPEEQSVRFKNQIDLKN-EINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
GFSELND E+Q RF NQI N E N L +YD +YI AL+YG+PP SG GIG+DRLI
Sbjct: 426 GFSELNDVEDQKTRFLNQIQKSNKEDNKNL--FYDKEYIEALKYGLPPTSGLGIGIDRLI 483
Query: 421 MLLTNSKNIRDVILFPHLR 439
M+LTN +IRDVILFP LR
Sbjct: 484 MILTNQISIRDVILFPTLR 502
>gi|359446877|ref|ZP_09236516.1| lysyl-tRNA synthetase, class II [Pseudoalteromonas sp. BSi20439]
gi|358039349|dbj|GAA72765.1| lysyl-tRNA synthetase, class II [Pseudoalteromonas sp. BSi20439]
Length = 511
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 217/433 (50%), Positives = 301/433 (69%), Gaps = 20/433 (4%)
Query: 21 DSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTNTGELSIKVSSLKLITKSL 80
D G++Q+Y S ++ K+L + DIGDIIG KG L K+ G+L + ++ +L+TKSL
Sbjct: 81 DMKGRVQVYASKDV-QKDLKAKYGQLDIGDIIGVKGPLNKSGKGDLYVDMAEYELLTKSL 139
Query: 81 RPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIISSIRHFMEKNDFMEVETPI 140
RPLP KF LS+QE KYR RY+DLI NE TR+ F+ R+Q++ IR F+ DFMEVETP+
Sbjct: 140 RPLPEKFHGLSDQETKYRQRYVDLITNEATRETFRIRSQVVEGIRRFLADRDFMEVETPM 199
Query: 141 LHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGFNKIFEINKNFRNEGISPR 200
L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++GGF+++FEIN+NFRNEG+S R
Sbjct: 200 LQVIPGGASARPFVTHHNALDIDMYLRIAPELYLKRLVVGGFDRVFEINRNFRNEGLSTR 259
Query: 201 HNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT-----TKIDYQGRLL-----DF 250
HNPEFTMIEFY AY +YI LM TE M++ + + +G+ T D G ++ DF
Sbjct: 260 HNPEFTMIEFYQAYADYIDLMNITEDMLRTVATNVLGSPIVVNTTKDENGEVIDSVEYDF 319
Query: 251 SKSFEKLTIIEAIKKYTPQYNEI---DLQNKL-FLKSELKKINPKFNQKKILNNLKKDIL 306
+ F +L++ +AI KY P+++ D +N LK+ K+++ K + + K
Sbjct: 320 GQPFTRLSMSDAILKYNPEFDAAVFNDPENHFEELKAYAKQVHVKIPENCVWGPGK---F 376
Query: 307 QLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIANGFSEL 366
+FEET E L PT+IT YP E+SPLAR+ N EN +T+RFE F+ G E+ANGFSEL
Sbjct: 377 LCEIFEETAEHMLIQPTFITGYPWEVSPLARR-NDENPFVTDRFEFFVGGRELANGFSEL 435
Query: 367 NDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLIMLLTNS 426
ND ++Q+ RF Q++ K+ + E + +YD DYI ALEYG+PP +G GIG+DRL+ML T+S
Sbjct: 436 NDAQDQAERFSRQVEEKDAGDDE-AMHYDEDYIRALEYGLPPTAGEGIGIDRLVMLFTDS 494
Query: 427 KNIRDVILFPHLR 439
I+DVILFPH+R
Sbjct: 495 STIKDVILFPHMR 507
>gi|399912576|ref|ZP_10780890.1| lysyl-tRNA ligase [Halomonas sp. KM-1]
Length = 516
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 216/451 (47%), Positives = 311/451 (68%), Gaps = 25/451 (5%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
R+M K F+++QD S IQLY+ + + + + D K +DIGDI+ A+G + K+
Sbjct: 78 RIMRKRGPFLVIQDPSA-----TIQLYVDKQGLPEEVLEDIKGWDIGDIVAARGPVHKSG 132
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + KL+TKSLRPLP+KF L++ E +YR RY+DLI+N ++RKVF+ R +IS
Sbjct: 133 KGDLYVMMEEAKLLTKSLRPLPDKFHGLTDMEARYRQRYVDLIMNPDSRKVFETRAGVIS 192
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
++R F E+ FMEVETP+L PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++GGF
Sbjct: 193 AMRRFFEERGFMEVETPMLQPIPGGATARPFITHHNALDIDMYLRIAPELYLKRLVVGGF 252
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKI- 241
K+FEIN+NFRNEG+S RHNPEFTM+EFY A+ N+ LM TE+M++ I + +GTT +
Sbjct: 253 EKVFEINRNFRNEGLSTRHNPEFTMVEFYQAHANHHDLMDLTEEMLRTIALKVLGTTTVV 312
Query: 242 ----DYQGRLL-----DFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKF 292
+ +G +L DF K +++++ ++I +Y P + L ++ + ++++
Sbjct: 313 NTVRNAEGEVLETFEYDFGKPLKRISVFDSILEYNPDIHAEALADEAAARQIAERLDIDV 372
Query: 293 NQKKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFEL 352
L +Q+ +FE+T E +L +PT+IT+YPTE+SPLAR+ N N +TERFE
Sbjct: 373 KDGWGLGK-----IQIEIFEKTVEHRLKDPTFITDYPTEVSPLARR-NDSNPFVTERFEF 426
Query: 353 FIIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSS-YYDTDYIHALEYGMPPASG 411
F+ G EIANGFSELND E+Q+ RF+ Q K G+L + YYD DY+ ALEYGMPP +G
Sbjct: 427 FVGGREIANGFSELNDAEDQAERFRAQAAEKE--AGDLEAMYYDADYLRALEYGMPPTAG 484
Query: 412 CGIGVDRLIMLLTNSKNIRDVILFPHLRNEN 442
GIG+DRL+ML T+S +IRDV+LFP +R E
Sbjct: 485 EGIGIDRLVMLFTDSASIRDVLLFPAMRPEG 515
>gi|126667156|ref|ZP_01738130.1| Protein-L-isoaspartate(D-aspartate) O-methyltransferase
[Marinobacter sp. ELB17]
gi|126628312|gb|EAZ98935.1| Protein-L-isoaspartate(D-aspartate) O-methyltransferase
[Marinobacter sp. ELB17]
Length = 514
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 214/449 (47%), Positives = 309/449 (68%), Gaps = 26/449 (5%)
Query: 3 KRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
+ ++ + +F ++QD +G ++Q+Y S K++ K++D+GDIIG G L ++
Sbjct: 74 RMMLDRKAFKVVQDVTG-----RMQVYAS-----KDVQKATKHWDLGDIIGVSGILARSG 123
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + L+TKSLRPLP K + L++ E +YRHRY+DL++NE++R+VF R++II+
Sbjct: 124 KGDLYVTMDDYLLLTKSLRPLPEKHKGLTDTESRYRHRYVDLMVNEDSRRVFLARSKIIT 183
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
++R F+ DFMEVETP+L PGGA A+PF+THHN+L + M+LRIAPELYLKRL++GGF
Sbjct: 184 AMRQFLADRDFMEVETPMLQVIPGGATARPFMTHHNALGIDMYLRIAPELYLKRLVVGGF 243
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT---- 238
++FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y LM TE M++ I +G+
Sbjct: 244 ERVFEINRNFRNEGLSTRHNPEFTMVEFYQAYADYNDLMDLTEDMLRSIAEQVLGSSLVV 303
Query: 239 -TKIDYQG---RL-LDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFN 293
T +D G R+ DF K+F++LT+++AI +Y + L ++ F + K +
Sbjct: 304 NTAVDADGNETRIEYDFGKTFDRLTVVDAIVRYNENVSAEQLADETFARQMAKDLG---- 359
Query: 294 QKKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELF 353
K+ N+ + + +FEET E +L PT+IT YP E+SPLAR + N +TERFE F
Sbjct: 360 -VKVKNSWGLGKVHIEIFEETAEHRLMQPTFITEYPKEVSPLARCKD-SNPFVTERFEFF 417
Query: 354 IIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCG 413
+ G EIANGFSELND E+Q+ RF+ Q+ K+ + E + +YD DY+ ALEYGMPP +G G
Sbjct: 418 VGGREIANGFSELNDAEDQAERFRAQVAEKDAGDDE-AMFYDEDYVMALEYGMPPTAGEG 476
Query: 414 IGVDRLIMLLTNSKNIRDVILFPHLRNEN 442
IG+DRL MLLTNS +IRDVILFP +R E+
Sbjct: 477 IGIDRLAMLLTNSASIRDVILFPAMRPEH 505
>gi|373466755|ref|ZP_09558066.1| lysine--tRNA ligase [Haemophilus sp. oral taxon 851 str. F0397]
gi|371760013|gb|EHO48718.1| lysine--tRNA ligase [Haemophilus sp. oral taxon 851 str. F0397]
Length = 502
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 214/446 (47%), Positives = 310/446 (69%), Gaps = 21/446 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLY-TDFKNYDIGDIIGAKGTLF 59
M +R MGK +FI +QD SG KIQLY++ + + + +Y D +D+GDI+G KGTLF
Sbjct: 71 MTRRAMGKATFITIQDMSG-----KIQLYVARDNLPEGVYKDDVGTWDLGDIVGVKGTLF 125
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL++K + ++L+TK+LRPLP+KF L++QE++YR RY+DLI NE +R+ F R++
Sbjct: 126 KTKTDELTVKTTEVQLLTKALRPLPDKFHGLTDQEVRYRQRYLDLISNEESRRTFIIRSK 185
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR + FMEVETP+L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 186 VVAGIREYFISKGFMEVETPMLQVIPGGASARPFVTHHNALDVDMYLRIAPELYLKRLVV 245
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTM+E+Y AY +Y LM TE++++K+ +D +GTT
Sbjct: 246 GGFERVFELNRNFRNEGVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTT 305
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKIN-PKFNQKKIL 298
+ Y DF K FE++T+ +A KY +NK +K +L + K +++
Sbjct: 306 IVKYGEYEFDFGKPFERITLHDATIKYG--------ENKGIVKEDLYDFDRAKATAERLG 357
Query: 299 NNLKKDI----LQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFI 354
++K + +FEE E L PT++ +P EISPLAR+ N EN ++T+RFELFI
Sbjct: 358 IEVQKSWGLGSIVNAIFEEVAEHHLIQPTFLMAHPAEISPLARR-NDENPDVTDRFELFI 416
Query: 355 IGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGI 414
G EI NGFSELND E+Q+ RF Q+ K E + + + D D++ ALE+G+PP +G G+
Sbjct: 417 GGREIGNGFSELNDAEDQNERFDAQVAAK-EAGDDEAMFKDEDFVVALEHGLPPTAGEGL 475
Query: 415 GVDRLIMLLTNSKNIRDVILFPHLRN 440
G+DRL ML N+ +IRDVILFP +R
Sbjct: 476 GIDRLAMLYANAPSIRDVILFPAMRQ 501
>gi|145637034|ref|ZP_01792697.1| lysyl-tRNA synthetase [Haemophilus influenzae PittHH]
gi|145269688|gb|EDK09628.1| lysyl-tRNA synthetase [Haemophilus influenzae PittHH]
Length = 502
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 213/443 (48%), Positives = 307/443 (69%), Gaps = 15/443 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLY-TDFKNYDIGDIIGAKGTLF 59
M +R MGK +FI +QD SG KIQLY++ + + + +Y D +D+GDI+G KGTLF
Sbjct: 71 MTRRAMGKATFITIQDMSG-----KIQLYVARDNLPEGVYKDDVGTWDLGDIVGVKGTLF 125
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL++K + ++L+TK+LRPLP+KF L++QE++YR RY+DLI NE +R+ F R++
Sbjct: 126 KTKTDELTVKTTEVQLLTKALRPLPDKFHGLTDQEVRYRQRYLDLISNEESRRTFIIRSK 185
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR + FMEVETP+L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 186 VVAGIREYFISKGFMEVETPMLQVIPGGASARPFVTHHNALDVDMYLRIAPELYLKRLVV 245
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTM+E+Y AY +Y LM TE++++K+ +D +GTT
Sbjct: 246 GGFERVFELNRNFRNEGVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTT 305
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI--DLQNKLFLKSELKKINPKFNQKKI 297
+ Y DF K FE++T+ +A KY + DL + K+ +++ + +
Sbjct: 306 IVKYGDLEFDFGKPFERITLHDATIKYGADKGIVKEDLYDFNRAKATAERLGIEVQKSWG 365
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L ++ I FEE E L PT++ +P EISPLAR+ N EN +T+RFELFI G
Sbjct: 366 LGSIVNAI-----FEEVAEHHLIQPTFLMAHPAEISPLARR-NDENPEVTDRFELFIGGR 419
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND E+Q+ RF Q+ K E + + + D D++ ALE+G+PP +G G+G+D
Sbjct: 420 EIGNGFSELNDAEDQNERFDAQVAAK-EAGDDEAMFKDEDFVVALEHGLPPTAGEGLGID 478
Query: 418 RLIMLLTNSKNIRDVILFPHLRN 440
RL ML N+ +IRDVILFP +R
Sbjct: 479 RLAMLYANAPSIRDVILFPAMRQ 501
>gi|239908486|ref|YP_002955228.1| lysyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
gi|239798353|dbj|BAH77342.1| lysyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
Length = 510
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 212/439 (48%), Positives = 300/439 (68%), Gaps = 13/439 (2%)
Query: 4 RVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTNT 63
R GK++F +QD SG +IQ++ E +G+ YT FK +DIGDI+G G LF+T T
Sbjct: 81 RSFGKVAFFTIQDASG-----RIQVFAERETLGQEAYTVFKKFDIGDIVGVTGRLFRTKT 135
Query: 64 GELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIISS 123
GEL++ +L L+TKS+RPLP K+ L + E +YR RY+DLI+ + ++FK RT II
Sbjct: 136 GELTLHADTLSLVTKSMRPLPEKYHGLKDVETRYRQRYVDLIVTPRSVEIFKARTTIIRE 195
Query: 124 IRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGFN 183
+R F++ + FMEVETP++ PGGA A+PF+THHN+L+M +++RIAPELYLKRL++GGF
Sbjct: 196 LRAFLDSSGFMEVETPMMQAIPGGATARPFVTHHNALDMGLYMRIAPELYLKRLLVGGFE 255
Query: 184 KIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKIDY 243
K++E+ +NFRNEG+S RHNPEFTM EFY AY Y LM TE++ ++ G+ + Y
Sbjct: 256 KVYEVGRNFRNEGVSTRHNPEFTMCEFYWAYARYTDLMDLTERLFARLAKAVTGSEAVSY 315
Query: 244 QGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNNLKK 303
QG+ ++ + + +L+ E+I+K EI +++ KS ++K + +K+L K
Sbjct: 316 QGQEINLAPGWARLSFHESIEKVGGIDPEI-IRDYDKAKSLVEK-----SGEKVLKGDKL 369
Query: 304 DILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIANGF 363
+Q LF+ E KL P +I +YPTEISPL+R+ N EN IT+RFELFI G E+AN F
Sbjct: 370 GKVQAKLFDIFVEPKLIQPHFIYHYPTEISPLSRR-NTENPEITDRFELFIAGREMANAF 428
Query: 364 SELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLIMLL 423
SELNDP +Q RF++Q+ K E + + D DY+ ALEYGMPPA+G GIG+DRL+MLL
Sbjct: 429 SELNDPVDQRQRFEDQVREK-EAGDDEAHRMDEDYVRALEYGMPPAAGEGIGIDRLVMLL 487
Query: 424 TNSKNIRDVILFPHLRNEN 442
T+ +IR+VILFP LR E
Sbjct: 488 TDQASIREVILFPLLRPEG 506
>gi|359437052|ref|ZP_09227127.1| lysyl-tRNA synthetase, class II [Pseudoalteromonas sp. BSi20311]
gi|358028311|dbj|GAA63376.1| lysyl-tRNA synthetase, class II [Pseudoalteromonas sp. BSi20311]
Length = 511
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 217/433 (50%), Positives = 301/433 (69%), Gaps = 20/433 (4%)
Query: 21 DSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTNTGELSIKVSSLKLITKSL 80
D G++Q+Y S ++ K+L + DIGDIIG KG L K+ G+L + ++ +L+TKSL
Sbjct: 81 DMKGRVQVYASKDV-QKDLKAKYGQLDIGDIIGVKGPLNKSGKGDLYVDMAEYELLTKSL 139
Query: 81 RPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIISSIRHFMEKNDFMEVETPI 140
RPLP KF LS+QE KYR RY+DLI NE TR+ F+ R+Q++ IR F+ DFMEVETP+
Sbjct: 140 RPLPEKFHGLSDQETKYRQRYVDLITNEATRETFRIRSQVVEGIRRFLADRDFMEVETPM 199
Query: 141 LHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGFNKIFEINKNFRNEGISPR 200
L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++GGF+++FEIN+NFRNEG+S R
Sbjct: 200 LQVIPGGASARPFVTHHNALDIDMYLRIAPELYLKRLVVGGFDRVFEINRNFRNEGLSTR 259
Query: 201 HNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT-----TKIDYQGRLL-----DF 250
HNPEFTMIEFY AY +YI LM TE M++ + + +G+ T D G ++ DF
Sbjct: 260 HNPEFTMIEFYQAYADYIDLMNITEDMLRTVATNVLGSPIVVNTTKDENGDVVDSVEYDF 319
Query: 251 SKSFEKLTIIEAIKKYTPQYNEI---DLQNKL-FLKSELKKINPKFNQKKILNNLKKDIL 306
+ F +L++ +AI KY P+++ D +N LK+ K+++ K + + K
Sbjct: 320 GQPFTRLSMADAILKYNPEFDAAVFNDPENHFEELKAYAKQVHVKIPENCVWGPGK---F 376
Query: 307 QLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIANGFSEL 366
+FEET E L PT+IT YP E+SPLAR+ N EN +T+RFE F+ G E+ANGFSEL
Sbjct: 377 LCEIFEETAEHMLIQPTFITGYPWEVSPLARR-NDENPFVTDRFEFFVGGRELANGFSEL 435
Query: 367 NDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLIMLLTNS 426
ND ++Q+ RF Q++ K+ + E + +YD DYI ALEYG+PP +G GIG+DRL+ML T+S
Sbjct: 436 NDAQDQAERFTRQVEEKDAGDDE-AMHYDEDYIRALEYGLPPTAGEGIGIDRLVMLFTDS 494
Query: 427 KNIRDVILFPHLR 439
I+DVILFPH+R
Sbjct: 495 STIKDVILFPHMR 507
>gi|414070191|ref|ZP_11406178.1| lysyl-tRNA synthetase, class II [Pseudoalteromonas sp. Bsw20308]
gi|410807289|gb|EKS13268.1| lysyl-tRNA synthetase, class II [Pseudoalteromonas sp. Bsw20308]
Length = 511
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 220/451 (48%), Positives = 309/451 (68%), Gaps = 26/451 (5%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
R++ K F ++QD G ++Q Y S ++ K+L + D GDIIG KG L K+
Sbjct: 68 RILAKRGPFFVIQDMKG-----RVQAYASKDV-QKDLKEKYGQLDTGDIIGVKGALNKSG 121
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L ++++ +L+TKSLRPLP KF LS+QE KYR RY+DLI NE TR+ F+ R+Q++
Sbjct: 122 KGDLYVEMTEYQLLTKSLRPLPEKFHGLSDQETKYRQRYVDLITNEATRETFRIRSQVVE 181
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
IR F+ + DFMEVETP+L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++GGF
Sbjct: 182 GIRRFLAERDFMEVETPMLQVIPGGASARPFVTHHNALDIDMYLRIAPELYLKRLVVGGF 241
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT---- 238
+++FEIN+NFRNEG+S RHNPEFTMIEFY AY +YI LM TE M++ + + +G+
Sbjct: 242 DRVFEINRNFRNEGLSTRHNPEFTMIEFYQAYADYIDLMNITEDMLRTVATNVLGSPIVI 301
Query: 239 -TKIDYQGRL-----LDFSKSFEKLTIIEAIKKYTPQYNEI---DLQNKLF-LKSELKKI 288
T D G + DF + F +L++ +AI KY P+++ D +N LK+ K++
Sbjct: 302 NTTKDENGEVTDSVEYDFGQPFTRLSMADAILKYNPEFDAAVFNDPENHFDELKAYAKQV 361
Query: 289 NPKFNQKKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITE 348
+ K + + K +FEET E L PT+IT YP E+SPLAR+ N EN+ +T+
Sbjct: 362 HVKIPENCVWGPGK---FLCEIFEETAEHMLIQPTFITGYPWEVSPLARR-NDENSFVTD 417
Query: 349 RFELFIIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPP 408
RFE F+ G E+ANGFSELND ++Q+ RF Q++ K+ + E + +YD DYI ALEYG+PP
Sbjct: 418 RFEFFVGGRELANGFSELNDAQDQAERFTRQVEEKDAGDDE-AMHYDEDYIRALEYGLPP 476
Query: 409 ASGCGIGVDRLIMLLTNSKNIRDVILFPHLR 439
+G GIG+DRL+ML T+S I+DVILFPH+R
Sbjct: 477 TAGEGIGIDRLVMLFTDSSTIKDVILFPHMR 507
>gi|359454237|ref|ZP_09243527.1| lysyl-tRNA synthetase, class II [Pseudoalteromonas sp. BSi20495]
gi|358048760|dbj|GAA79776.1| lysyl-tRNA synthetase, class II [Pseudoalteromonas sp. BSi20495]
Length = 511
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 219/451 (48%), Positives = 309/451 (68%), Gaps = 26/451 (5%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
R++ K F ++QD G ++Q Y S ++ K+L + D GDIIG KG L K+
Sbjct: 68 RILAKRGPFFVIQDMKG-----RVQAYASKDV-QKDLKEKYGQLDTGDIIGVKGALNKSG 121
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L ++++ +L+TKSLRPLP KF LS+QE KYR RY+DLI NE TR+ F+ R+Q++
Sbjct: 122 KGDLYVEMTEYQLLTKSLRPLPEKFHGLSDQETKYRQRYVDLITNEATRETFRIRSQVVE 181
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
IR F+ DFMEVETP+L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++GGF
Sbjct: 182 GIRRFLADRDFMEVETPMLQVIPGGASARPFVTHHNALDIDMYLRIAPELYLKRLVVGGF 241
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKI- 241
+++FEIN+NFRNEG+S RHNPEFTMIEFY AY +YI LM TE M++ + + +G+ +
Sbjct: 242 DRVFEINRNFRNEGLSTRHNPEFTMIEFYQAYADYIDLMNITEDMLRTVAENVLGSAVVV 301
Query: 242 ----DYQGRLL-----DFSKSFEKLTIIEAIKKYTPQYNEI---DLQNKLF-LKSELKKI 288
D G ++ DF + F +L++ +AI KY P+++ D +N LK+ K++
Sbjct: 302 NTTKDENGEVIDSVEYDFGQPFTRLSMSDAILKYNPEFDAAVFNDPENHFDELKAYAKQV 361
Query: 289 NPKFNQKKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITE 348
+ K + + K +FEET E L PT+IT YP E+SPLAR+ N EN+ +T+
Sbjct: 362 HVKIPENCVWGPGK---FLCEIFEETAEHMLIQPTFITGYPWEVSPLARR-NDENSFVTD 417
Query: 349 RFELFIIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPP 408
RFE F+ G E+ANGFSELND ++Q+ RF Q++ K+ + E + +YD DYI ALEYG+PP
Sbjct: 418 RFEFFVGGRELANGFSELNDAQDQAERFTRQVEEKDAGDDE-AMHYDEDYIRALEYGLPP 476
Query: 409 ASGCGIGVDRLIMLLTNSKNIRDVILFPHLR 439
+G GIG+DRL+ML T+S I+DVILFPH+R
Sbjct: 477 TAGEGIGIDRLVMLFTDSSTIKDVILFPHMR 507
>gi|308048395|ref|YP_003911961.1| lysyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
gi|307630585|gb|ADN74887.1| lysyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
Length = 493
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 216/437 (49%), Positives = 300/437 (68%), Gaps = 15/437 (3%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
R+M K F+ +QD SG +IQ Y S E+ + DIGDIIG KG L K+
Sbjct: 68 RIMAKRGPFLAIQDVSG-----RIQSYASKEV--QQELKSIGGLDIGDIIGVKGQLHKSG 120
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + ++ +L+TK+LRPLP KF L++QE +YR RY+DLI+NE +R FK R+++I+
Sbjct: 121 KGDLYVDMAEYQLLTKALRPLPEKFHGLTDQEQRYRQRYVDLIVNEESRNTFKVRSKVIA 180
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR +M DFMEVETP++ PGGA A+PFITHHN+L+ M+LRIAPELYLKRL++GGF
Sbjct: 181 AIRQYMTDRDFMEVETPMMQVIPGGASARPFITHHNALDQDMYLRIAPELYLKRLVVGGF 240
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
+++FEIN+NFRNEG+SPRHNPEFTM+EFY AY +Y LM TE M++ + +G+ K+
Sbjct: 241 DRVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYRDLMDLTEDMLRTVTEQVLGSAKVK 300
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNNLK 302
Y DF F ++++ EAI KY P+ +++ + E+ K + K +K L
Sbjct: 301 YGEEEFDFGAPFARMSMREAILKYNPEVT-LEMLSTFESACEVAK-DLKIEVEKSW-GLG 357
Query: 303 KDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIANG 362
+ I + +FEET E +L PT+IT YP E+SPLAR+ N +N IT+RFE F+ G EIANG
Sbjct: 358 RVITE--IFEETAEHRLIQPTFITEYPAEVSPLARR-NDDNPEITDRFEFFVGGREIANG 414
Query: 363 FSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLIML 422
FSELND E+Q RF +Q+ K + E + ++D DY+ ALE+G+PP +G GIG+DRL+ML
Sbjct: 415 FSELNDAEDQKQRFLDQVKAKESGDDE-AMFFDGDYVTALEHGLPPTAGQGIGIDRLVML 473
Query: 423 LTNSKNIRDVILFPHLR 439
T+S IRDVILFP +R
Sbjct: 474 FTDSHTIRDVILFPAMR 490
>gi|260581089|ref|ZP_05848910.1| lysyl-tRNA synthetase [Haemophilus influenzae RdAW]
gi|260092218|gb|EEW76160.1| lysyl-tRNA synthetase [Haemophilus influenzae RdAW]
Length = 502
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 213/443 (48%), Positives = 307/443 (69%), Gaps = 15/443 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLY-TDFKNYDIGDIIGAKGTLF 59
M +R MGK +FI +QD SG KIQLY++ + + + +Y D +D+GDI+G KGTLF
Sbjct: 71 MTRRAMGKATFITIQDMSG-----KIQLYVARDNLPEGVYKDDVGTWDLGDIVGIKGTLF 125
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL++K + ++L+TK+LRPLP+KF L++QE++YR RY+DLI NE +R+ F R++
Sbjct: 126 KTKTDELTVKTTEVQLLTKALRPLPDKFHGLTDQEVRYRQRYLDLISNEESRRTFIIRSK 185
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR + FMEVETP+L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 186 VVAGIREYFISKGFMEVETPMLQVIPGGASARPFVTHHNALDVDMYLRIAPELYLKRLVV 245
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTM+E+Y AY +Y LM TE++++K+ +D +GTT
Sbjct: 246 GGFERVFELNRNFRNEGVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTT 305
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI--DLQNKLFLKSELKKINPKFNQKKI 297
+ Y DF K FE++T+ +A KY + DL + K+ +++ + +
Sbjct: 306 IVKYGDLEFDFGKPFERITLHDATIKYGADKGIVKEDLYDFDRAKATAERLGIEVQKSWG 365
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L ++ I FEE E L PT++ +P EISPLAR+ N EN +T+RFELFI G
Sbjct: 366 LGSIVNAI-----FEEVAEHHLIQPTFLMAHPAEISPLARR-NDENPEVTDRFELFIGGR 419
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND E+Q+ RF Q+ K E + + + D D++ ALE+G+PP +G G+G+D
Sbjct: 420 EIGNGFSELNDAEDQNERFDAQVAAK-EAGDDEAMFKDEDFVVALEHGLPPTAGEGLGID 478
Query: 418 RLIMLLTNSKNIRDVILFPHLRN 440
RL ML N+ +IRDVILFP +R
Sbjct: 479 RLAMLYANAPSIRDVILFPAMRQ 501
>gi|410462540|ref|ZP_11316113.1| lysyl-tRNA synthetase (class II) [Desulfovibrio magneticus str.
Maddingley MBC34]
gi|409984346|gb|EKO40662.1| lysyl-tRNA synthetase (class II) [Desulfovibrio magneticus str.
Maddingley MBC34]
Length = 529
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 211/439 (48%), Positives = 300/439 (68%), Gaps = 13/439 (2%)
Query: 4 RVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTNT 63
R GK++F +QD SG +IQ++ E +G+ YT FK +DIGDI+G G LF+T T
Sbjct: 100 RSFGKVAFFTIQDASG-----RIQVFAERETLGQEAYTVFKKFDIGDIVGVTGRLFRTKT 154
Query: 64 GELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIISS 123
GEL++ +L L+TKS+RPLP K+ L + E +YR RY+DLI+ + ++FK RT II
Sbjct: 155 GELTLHADTLALVTKSMRPLPEKYHGLKDVETRYRQRYVDLIVTPRSVEIFKARTTIIRE 214
Query: 124 IRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGFN 183
+R F++ + FMEVETP++ PGGA A+PF+THHN+L+M +++RIAPELYLKRL++GGF
Sbjct: 215 LRAFLDGSGFMEVETPMMQAIPGGATARPFVTHHNALDMGLYMRIAPELYLKRLLVGGFE 274
Query: 184 KIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKIDY 243
K++E+ +NFRNEG+S RHNPEFTM EFY AY Y LM TE++ ++ G+ + Y
Sbjct: 275 KVYEVGRNFRNEGVSTRHNPEFTMCEFYWAYARYTDLMDLTEQLFARLAKAVTGSEAVSY 334
Query: 244 QGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNNLKK 303
QG+ ++ + + +L+ E+I+K EI +++ K+ ++K + +K+L K
Sbjct: 335 QGQEINLAPGWARLSFHESIEKVGGIDPEI-IRDYDKAKALVEK-----SGEKVLKGEKL 388
Query: 304 DILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIANGF 363
+Q LF+ E KL P +I +YPTEISPL+R+ N EN IT+RFELFI G E+AN F
Sbjct: 389 GKVQAKLFDIFVEPKLIQPHFIYHYPTEISPLSRR-NTENPEITDRFELFIAGREMANAF 447
Query: 364 SELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLIMLL 423
SELNDP +Q RF++Q+ K E + + D DY+ ALEYGMPPA+G GIG+DRL+MLL
Sbjct: 448 SELNDPVDQRQRFEDQVREK-EAGDDEAHRMDEDYVRALEYGMPPAAGEGIGIDRLVMLL 506
Query: 424 TNSKNIRDVILFPHLRNEN 442
T+ +IR+VILFP LR E
Sbjct: 507 TDQASIREVILFPLLRPEG 525
>gi|416047337|ref|ZP_11576002.1| lysyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype d str. I63B]
gi|347994178|gb|EGY35485.1| lysyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype d str. I63B]
Length = 478
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 213/443 (48%), Positives = 309/443 (69%), Gaps = 15/443 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLY-TDFKNYDIGDIIGAKGTLF 59
M +R MGK +FI +QD SG KIQLY++ + + + +Y D ++D+GDI+G KG+LF
Sbjct: 47 MTRRAMGKATFITIQDMSG-----KIQLYVARDNLPEGVYKDDVGHWDLGDIVGIKGSLF 101
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL++K + ++L+TK+LRPLP+KF L++QE++YR RY+DLI NE +R+ F R++
Sbjct: 102 KTKTDELTVKATEVQLLTKALRPLPDKFHGLTDQEVRYRQRYLDLISNEESRRTFIIRSK 161
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR + FMEVETP+L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 162 VVAGIREYFLSKGFMEVETPMLQVIPGGAAARPFVTHHNALDVDMYLRIAPELYLKRLVV 221
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTM+E+Y AY +Y LM TE++++K+ +D +GTT
Sbjct: 222 GGFERVFELNRNFRNEGVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTT 281
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI--DLQNKLFLKSELKKINPKFNQKKI 297
+ Y DF K FE++T+ AI KY + + DL + K+ +++ + +
Sbjct: 282 IVKYGDLEFDFGKPFERITLHNAIIKYGSEKGIVKEDLYDFDRAKATAERLGIEVQKSWG 341
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L ++ I FEE E L PT++ +P EISPLAR+ N EN +T+RFELFI G
Sbjct: 342 LGSIVNAI-----FEEVVEHHLIQPTFLMAHPAEISPLARR-NDENPEVTDRFELFIGGR 395
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND E+Q+ RF Q+ K E + + + D D++ ALE+G+PP +G G+G+D
Sbjct: 396 EIGNGFSELNDAEDQNDRFDAQVAAK-EAGDDEAMFKDEDFVIALEHGLPPTAGEGLGID 454
Query: 418 RLIMLLTNSKNIRDVILFPHLRN 440
RL ML N+ +IRDVILFP +R
Sbjct: 455 RLAMLYANAPSIRDVILFPAMRQ 477
>gi|315127589|ref|YP_004069592.1| lysyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
gi|315016103|gb|ADT69441.1| lysyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
Length = 511
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 217/433 (50%), Positives = 301/433 (69%), Gaps = 20/433 (4%)
Query: 21 DSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTNTGELSIKVSSLKLITKSL 80
D G++Q+Y S ++ K+L + DIGDIIG KG L K+ G+L + ++ +L+TKSL
Sbjct: 81 DMKGRVQVYASKDV-QKDLKAKYGQLDIGDIIGVKGPLNKSGKGDLYVDMAEYELLTKSL 139
Query: 81 RPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIISSIRHFMEKNDFMEVETPI 140
RPLP KF LS+QE KYR RY+DLI NE TR+ F+ R+Q++ IR F+ DFMEVETP+
Sbjct: 140 RPLPEKFHGLSDQETKYRQRYVDLITNEATRETFRIRSQVVEGIRRFLADRDFMEVETPM 199
Query: 141 LHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGFNKIFEINKNFRNEGISPR 200
L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++GGF+++FEIN+NFRNEG+S R
Sbjct: 200 LQVIPGGASARPFVTHHNALDIDMYLRIAPELYLKRLVVGGFDRVFEINRNFRNEGLSTR 259
Query: 201 HNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT-----TKIDYQGRLL-----DF 250
HNPEFTMIEFY AY +YI LM TE M++ + + +G+ T D G ++ DF
Sbjct: 260 HNPEFTMIEFYQAYADYIDLMNITEDMLRTVATNVLGSPIVVNTTKDENGDVVDSVEYDF 319
Query: 251 SKSFEKLTIIEAIKKYTPQYNEI---DLQNKL-FLKSELKKINPKFNQKKILNNLKKDIL 306
+ F +L++ +AI KY P+++ D +N LK+ K+++ K + + K
Sbjct: 320 GQPFTRLSMSDAILKYNPEFDAAVFNDPENHFEELKAYAKQVHVKIPENCVWGPGK---F 376
Query: 307 QLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIANGFSEL 366
+FEET E L PT+IT YP E+SPLAR+ N EN +T+RFE F+ G E+ANGFSEL
Sbjct: 377 LCEIFEETAEHMLIQPTFITGYPWEVSPLARR-NDENPFVTDRFEFFVGGRELANGFSEL 435
Query: 367 NDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLIMLLTNS 426
ND ++Q+ RF Q++ K+ + E + +YD DYI ALEYG+PP +G GIG+DRL+ML T+S
Sbjct: 436 NDAQDQAERFTRQVEEKDAGDDE-AMHYDEDYIRALEYGLPPTAGEGIGIDRLVMLFTDS 494
Query: 427 KNIRDVILFPHLR 439
I+DVILFPH+R
Sbjct: 495 STIKDVILFPHMR 507
>gi|359441949|ref|ZP_09231833.1| lysyl-tRNA synthetase, class II [Pseudoalteromonas sp. BSi20429]
gi|392533332|ref|ZP_10280469.1| lysyl-tRNA ligase [Pseudoalteromonas arctica A 37-1-2]
gi|358036210|dbj|GAA68082.1| lysyl-tRNA synthetase, class II [Pseudoalteromonas sp. BSi20429]
Length = 511
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 219/451 (48%), Positives = 308/451 (68%), Gaps = 26/451 (5%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
R++ K F ++QD G ++Q Y S ++ K+L + D GDIIG KG L K+
Sbjct: 68 RILAKRGPFFVIQDMKG-----RVQAYASKDV-QKDLKEKYGQLDTGDIIGVKGALNKSG 121
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L ++++ +L+TKSLRPLP KF LS+QE KYR RY+DLI NE TR+ F+ R+Q++
Sbjct: 122 KGDLYVEMTEYQLLTKSLRPLPEKFHGLSDQETKYRQRYVDLITNEATRETFRIRSQVVE 181
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
IR F+ DFMEVETP+L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++GGF
Sbjct: 182 GIRRFLADRDFMEVETPMLQVIPGGASARPFVTHHNALDIDMYLRIAPELYLKRLVVGGF 241
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKI- 241
+++FEIN+NFRNEG+S RHNPEFTMIEFY AY +YI LM TE M++ + + +G+ +
Sbjct: 242 DRVFEINRNFRNEGLSTRHNPEFTMIEFYQAYADYIDLMNITEDMLRTVAENVLGSAVVV 301
Query: 242 ----DYQGRLL-----DFSKSFEKLTIIEAIKKYTPQYNEI---DLQNKLF-LKSELKKI 288
D G ++ DF + F +L++ +AI KY P+++ D +N LK+ K++
Sbjct: 302 NTTKDENGEVIDSVEYDFGQPFTRLSMSDAILKYNPEFDAAVFNDPENHFDELKAYAKQV 361
Query: 289 NPKFNQKKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITE 348
+ K + + K +FEET E L PT+IT YP E+SPLAR+ N EN +T+
Sbjct: 362 HVKIPENCVWGPGK---FLCEIFEETAEHMLIQPTFITGYPWEVSPLARR-NDENAFVTD 417
Query: 349 RFELFIIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPP 408
RFE F+ G E+ANGFSELND ++Q+ RF Q++ K+ + E + +YD DYI ALEYG+PP
Sbjct: 418 RFEFFVGGRELANGFSELNDAQDQAERFTRQVEEKDAGDDE-AMHYDEDYIRALEYGLPP 476
Query: 409 ASGCGIGVDRLIMLLTNSKNIRDVILFPHLR 439
+G GIG+DRL+ML T+S I+DVILFPH+R
Sbjct: 477 TAGEGIGIDRLVMLFTDSSTIKDVILFPHMR 507
>gi|417841085|ref|ZP_12487191.1| Lysyl-tRNA synthetase [Haemophilus haemolyticus M19501]
gi|341949985|gb|EGT76582.1| Lysyl-tRNA synthetase [Haemophilus haemolyticus M19501]
Length = 502
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 213/443 (48%), Positives = 307/443 (69%), Gaps = 15/443 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLY-TDFKNYDIGDIIGAKGTLF 59
M +R MGK +FI +QD SG KIQLY++ + + + +Y D +D+GDI+G KGTLF
Sbjct: 71 MTRRAMGKATFITIQDMSG-----KIQLYVARDNLPEGVYKDDVGTWDLGDIVGIKGTLF 125
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL++K + ++L+TK+LRPLP+KF L++QE++YR RY+DLI NE +R+ F R++
Sbjct: 126 KTKTDELTVKTTEVQLLTKALRPLPDKFHGLTDQEVRYRQRYLDLISNEESRRTFIIRSK 185
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR + FMEVETP+L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 186 VVAGIREYFISKGFMEVETPMLQVIPGGASARPFVTHHNALDVDMYLRIAPELYLKRLVV 245
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTM+E+Y AY +Y LM TE++++K+ +D +GTT
Sbjct: 246 GGFERVFELNRNFRNEGVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTT 305
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI--DLQNKLFLKSELKKINPKFNQKKI 297
+ Y DF K FE++T+ +A KY + DL + K+ +++ + +
Sbjct: 306 IVKYGDLEFDFGKPFERITLHDATIKYGADKGIVKEDLYDFNRAKATAERLGIEVQKSWG 365
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L ++ I FEE E L PT++ +P EISPLAR+ N EN +T+RFELFI G
Sbjct: 366 LGSIVNAI-----FEEVAEHHLIQPTFLMAHPAEISPLARR-NDENPEVTDRFELFIGGR 419
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND E+Q+ RF Q+ K E + + + D D++ ALE+G+PP +G G+G+D
Sbjct: 420 EIGNGFSELNDAEDQNERFDAQVAAK-EAGDDEAMFKDEDFVVALEHGLPPTAGEGLGID 478
Query: 418 RLIMLLTNSKNIRDVILFPHLRN 440
RL ML N+ +IRDVILFP +R
Sbjct: 479 RLAMLYANAPSIRDVILFPAMRQ 501
>gi|332534753|ref|ZP_08410581.1| lysyl-tRNA synthetase, class II [Pseudoalteromonas haloplanktis
ANT/505]
gi|332035840|gb|EGI72324.1| lysyl-tRNA synthetase, class II [Pseudoalteromonas haloplanktis
ANT/505]
Length = 511
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 220/451 (48%), Positives = 308/451 (68%), Gaps = 26/451 (5%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
R++ K F ++QD G ++Q Y S ++ K+L + D GDIIG KG L K+
Sbjct: 68 RILAKRGPFFVIQDMKG-----RVQAYASKDV-QKDLKEKYGQLDTGDIIGVKGALNKSG 121
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L ++++ +L+TKSLRPLP KF LS+QE KYR RY+DLI NE TR+ F+ R+Q++
Sbjct: 122 KGDLYVEMTEYQLLTKSLRPLPEKFHGLSDQETKYRQRYVDLITNEATRETFRIRSQVVE 181
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
IR F+ DFMEVETP+L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++GGF
Sbjct: 182 GIRRFLADRDFMEVETPMLQVIPGGASARPFVTHHNALDIDMYLRIAPELYLKRLVVGGF 241
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT---- 238
+++FEIN+NFRNEG+S RHNPEFTMIEFY AY +YI LM TE M++ + + +G+
Sbjct: 242 DRVFEINRNFRNEGLSTRHNPEFTMIEFYQAYADYIDLMNITEDMLRTVAENVLGSAIVV 301
Query: 239 -TKIDYQGRLL-----DFSKSFEKLTIIEAIKKYTPQYNEI---DLQNKL-FLKSELKKI 288
T D G ++ DF + F +L++ +AI KY P+++ D +N LK+ K++
Sbjct: 302 NTTKDENGEVIDSVEYDFGQPFTRLSMADAILKYNPEFDAAVFNDPENHFEELKAYAKQV 361
Query: 289 NPKFNQKKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITE 348
+ K + + K +FEET E L PT+IT YP E+SPLAR+ N EN +T+
Sbjct: 362 HVKIPENCVWGPGK---FLCEIFEETAEHMLIQPTFITGYPWEVSPLARR-NDENPFVTD 417
Query: 349 RFELFIIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPP 408
RFE F+ G E+ANGFSELND ++Q+ RF Q++ K+ + E + +YD DYI ALEYG+PP
Sbjct: 418 RFEFFVGGRELANGFSELNDAQDQAERFTRQVEEKDAGDDE-AMHYDEDYIRALEYGLPP 476
Query: 409 ASGCGIGVDRLIMLLTNSKNIRDVILFPHLR 439
+G GIG+DRL+ML T+S I+DVILFPH+R
Sbjct: 477 TAGEGIGIDRLVMLFTDSSTIKDVILFPHMR 507
>gi|260914425|ref|ZP_05920894.1| lysine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
gi|260631526|gb|EEX49708.1| lysine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
Length = 501
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 216/443 (48%), Positives = 306/443 (69%), Gaps = 15/443 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYT-DFKNYDIGDIIGAKGTLF 59
M +R MGK +FI LQD SG +IQLY++ + + +Y D +D+GDIIG KGTLF
Sbjct: 70 MTRRAMGKATFITLQDMSG-----RIQLYVARDNLPDGVYAEDVGTWDLGDIIGVKGTLF 124
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL+++ + ++L+TK+LRPLP+KF LS+QE +YR RY+DLI NE +R+ F R++
Sbjct: 125 KTKTNELTVRCTEVELLTKALRPLPDKFHGLSDQETRYRQRYLDLISNEESRRTFIIRSK 184
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+I+ IR + FMEVETP+L PGGA A+PFITHHN+L++ M+LRIAPELYLKRL++
Sbjct: 185 VIAGIRDYFISKGFMEVETPMLQIIPGGASARPFITHHNALDVDMYLRIAPELYLKRLVV 244
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTM+E+Y AY +Y LM TE++++K+ +D +GTT
Sbjct: 245 GGFERVFELNRNFRNEGVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTT 304
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI--DLQNKLFLKSELKKINPKFNQKKI 297
+ Y DF K FE++T+ +AI KY + DL + + +K+ + +
Sbjct: 305 IVPYGEYEFDFGKPFERITMHDAILKYGADKGIVKEDLYDFDRAVTVAEKLGIEVQKSWG 364
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L +L ++FEE E L PT++ +P EISPLAR+ N EN +T+RFELFI G
Sbjct: 365 LGSLVN-----VIFEEVAEHHLIQPTFLMAHPAEISPLARR-NDENPEVTDRFELFIGGR 418
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND E+Q+ RF Q+ K E + + + D D++ ALE+G+PP +G G+G+D
Sbjct: 419 EIGNGFSELNDAEDQNERFDAQVAAK-EAGDDEAMFKDEDFVTALEHGLPPTAGEGLGID 477
Query: 418 RLIMLLTNSKNIRDVILFPHLRN 440
RL ML N+ +IRDVILFP ++
Sbjct: 478 RLAMLFANAASIRDVILFPAMKQ 500
>gi|226328241|ref|ZP_03803759.1| hypothetical protein PROPEN_02134 [Proteus penneri ATCC 35198]
gi|225202974|gb|EEG85328.1| lysine--tRNA ligase [Proteus penneri ATCC 35198]
Length = 402
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 204/397 (51%), Positives = 287/397 (72%), Gaps = 7/397 (1%)
Query: 43 FKNYDIGDIIGAKGTLFKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYI 102
FK +D+GDI+GA+G +FKT TGELS+ + ++L+TK+LRPLP+KF L++QE++YR RY+
Sbjct: 10 FKKWDLGDILGARGRVFKTKTGELSVHCTEVRLLTKALRPLPDKFHGLADQEMRYRQRYL 69
Query: 103 DLIINENTRKVFKKRTQIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNM 162
DLI NE +RK F+ R+Q+++ IR FM FMEVETP++ PGGA A+PFITHHN+L++
Sbjct: 70 DLISNEESRKTFQIRSQVMAGIRQFMVNKGFMEVETPMMQTIPGGASARPFITHHNALDI 129
Query: 163 KMFLRIAPELYLKRLIIGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMK 222
M+LRIAPELYLKRL++GGF+++FEIN+NFRNEG+SPRHNPEFTM+E Y AY +Y L++
Sbjct: 130 DMYLRIAPELYLKRLVVGGFDRVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYRDLIE 189
Query: 223 FTEKMIKKIIMDCIGTTKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLK 282
TE++ + + + +G++ + Y + DF K F KLT+ EAI KY P+ DL +
Sbjct: 190 LTEELFRTLTENVLGSSLVKYGDQEFDFGKPFAKLTMKEAICKYRPETVMADLDDMDKAV 249
Query: 283 SELKKINPKFNQKKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIE 342
+ + I K + L +Q +FEE E+ L PT+I YP E+SPLAR+ N +
Sbjct: 250 AIAQSIGIKIEKSWGLGR-----VQCEIFEEVAESHLIQPTFIIEYPAEVSPLARR-NDD 303
Query: 343 NNNITERFELFIIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHAL 402
N IT+RFE FI G EI NGFSELND ++Q+ RF++Q+ K + E + ++D DYI AL
Sbjct: 304 NPFITDRFEFFIGGREIGNGFSELNDAQDQAERFEDQVRQKEAGDAE-AMFFDHDYITAL 362
Query: 403 EYGMPPASGCGIGVDRLIMLLTNSKNIRDVILFPHLR 439
E+G+PP +G GIG+DR++ML T+S IRDVILFP +R
Sbjct: 363 EHGLPPTAGLGIGIDRMVMLFTDSHTIRDVILFPAMR 399
>gi|315634627|ref|ZP_07889911.1| lysine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
gi|315476575|gb|EFU67323.1| lysine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
Length = 502
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 212/443 (47%), Positives = 307/443 (69%), Gaps = 15/443 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLY-TDFKNYDIGDIIGAKGTLF 59
M +R MGK +FI +QD SG KIQLY++ + + + +Y D ++D+GDI+G KG+LF
Sbjct: 71 MTRRAMGKATFITIQDMSG-----KIQLYVARDNLPEGVYGDDVGHWDLGDIVGVKGSLF 125
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL++K + ++L+TK+LRPLP+KF L++QE++YR RY+DLI NE +R+ F R++
Sbjct: 126 KTKTNELTVKATDVQLLTKALRPLPDKFHGLTDQEVRYRQRYLDLISNEESRRTFIIRSK 185
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR + FMEVETP+L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 186 VVAGIRDYFISKGFMEVETPMLQVIPGGASARPFVTHHNALDVDMYLRIAPELYLKRLVV 245
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTM+E+Y AY +Y LM TE++++K+ +D +GTT
Sbjct: 246 GGFERVFELNRNFRNEGVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTT 305
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI--DLQNKLFLKSELKKINPKFNQKKI 297
+ Y DF K FE++T+ +A KY + DL + K+ ++ + +
Sbjct: 306 IVKYGEYEFDFGKPFERITLHDATIKYGADKGIVKEDLYDIDRAKAVAARLGIEVQKSWG 365
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L ++ I FEE E L PT++ +P EISPLAR+ N EN +T+RFELFI G
Sbjct: 366 LGSIVNAI-----FEEVAEHHLIQPTFLMAHPAEISPLARR-NDENPEVTDRFELFIGGR 419
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND E+Q+ RF Q+ K E + + + D D++ ALE+G+PP +G G+G+D
Sbjct: 420 EIGNGFSELNDAEDQNERFDAQVAAK-EAGDDEAMFKDEDFVVALEHGLPPTAGEGLGID 478
Query: 418 RLIMLLTNSKNIRDVILFPHLRN 440
RL ML N+ +IRDVILFP +R
Sbjct: 479 RLAMLYANAPSIRDVILFPAMRQ 501
>gi|334338858|ref|YP_004543838.1| lysyl-tRNA synthetase [Desulfotomaculum ruminis DSM 2154]
gi|334090212|gb|AEG58552.1| lysyl-tRNA synthetase [Desulfotomaculum ruminis DSM 2154]
Length = 508
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 213/443 (48%), Positives = 304/443 (68%), Gaps = 21/443 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M KRVMGK SF LQD+SG IQ+Y+ + +G Y F+ DIGDIIG G +F+
Sbjct: 80 MAKRVMGKASFANLQDSSG-----NIQIYVRLDELGPEEYACFEKLDIGDIIGCSGKVFR 134
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T GE+++ + S K+++KSLRPLP K+ L + +++YR RY+DLI+N ++ F R+++
Sbjct: 135 TRKGEITLHIDSYKILSKSLRPLPEKWHGLKDVDLRYRQRYVDLIVNPEVKQAFITRSKV 194
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+ SIR+++++ F+EVETP++H GGA A+PF T+HN+L+MK+++RIAPELYLKRL++G
Sbjct: 195 VRSIRNYLDEKGFLEVETPMMHPIAGGASARPFTTYHNTLDMKLYMRIAPELYLKRLLVG 254
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF+K++EIN+NFRNEGIS +HNPEFT IE Y AY +Y +M TE +I ++ + +GTT
Sbjct: 255 GFDKVYEINRNFRNEGISTKHNPEFTTIELYQAYADYEVMMDLTEDLISQVAQEVLGTTT 314
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYT----PQYNEIDLQNKLFLKSELKKINPKFNQKK 296
++Y+G L +K + ++ ++E +K+Y+ Q + D + K L I P +
Sbjct: 315 VEYEGVTLCLAKPWRRVPMLEIVKEYSGLDFTQLKDADAAYQAAKKLNL-DIEPGASWGD 373
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
ILN ++FEE E KL PT+I +YP +ISPLA++ E +T RFELFI G
Sbjct: 374 ILN---------VVFEEKVEDKLIQPTFIIDYPVDISPLAKRQK-EQPELTYRFELFIYG 423
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+AN FSELNDP +Q RF Q++ +N + E + YD DYI ALEYGMPPA G GIG+
Sbjct: 424 REMANAFSELNDPIDQKGRFLAQVEKRNAGDDE-AQMYDEDYIQALEYGMPPAGGLGIGI 482
Query: 417 DRLIMLLTNSKNIRDVILFPHLR 439
DRL+MLLTNS +IRDVILFP +R
Sbjct: 483 DRLVMLLTNSSSIRDVILFPLMR 505
>gi|90579832|ref|ZP_01235640.1| lysyl-tRNA synthetase [Photobacterium angustum S14]
gi|90438717|gb|EAS63900.1| lysyl-tRNA synthetase [Photobacterium angustum S14]
Length = 501
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 217/446 (48%), Positives = 305/446 (68%), Gaps = 20/446 (4%)
Query: 4 RVMGKIS-FIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
R+M K F++LQD SG +IQ+Y +N+ + + L + + DIGDIIG KG + +++
Sbjct: 69 RIMAKRGPFMVLQDVSG-----RIQVY-ANKQVQEELKAKYHSLDIGDIIGVKGQVHRSD 122
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
GEL + + +L TK+LRPLP KF L++QE +YR RY+DLIINE +R R+++++
Sbjct: 123 RGELYVNMDEYELQTKALRPLPEKFHGLTDQEQRYRQRYVDLIINEESRNTMIMRSKVVA 182
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+IR FM K+ FMEVETP++H GGA A+PFITHHN+L++ M+LRIAPELYLKRL++GGF
Sbjct: 183 AIRQFMLKHQFMEVETPMMHPIAGGASARPFITHHNALDIDMYLRIAPELYLKRLVVGGF 242
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
++FEIN+NFRNEGISPRHNPEFTM+EFY AY +Y L+ FTE ++ + + GTT +
Sbjct: 243 ERVFEINRNFRNEGISPRHNPEFTMMEFYMAYADYNDLIDFTEDLLSSVAKELCGTTALP 302
Query: 243 YQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI------DLQNKLFLKSELKKINPKFNQKK 296
Y +++FS + ++T++EAI+ Y P I ++NK + ++ +
Sbjct: 303 YGEHVIEFSGPYTRVTMLEAIQHYNPDNRRIQDLSYEQIKNKELMVDIASEVGVEVESFW 362
Query: 297 ILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIG 356
L ++I F ET E KL PT+IT YP +ISPLAR+S+ E+ IT+RFE F+ G
Sbjct: 363 TCGQLLEEI-----FGETAEPKLLQPTFITGYPADISPLARRSD-EDPFITDRFEFFVGG 416
Query: 357 NEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGV 416
E+ANGFSELND ++Q RFK Q+ K+ + E + YD DYI ALE+G+PP +G GIG+
Sbjct: 417 REVANGFSELNDAQDQDSRFKAQMAAKDAGDDE-AMQYDEDYIRALEFGLPPTAGQGIGI 475
Query: 417 DRLIMLLTNSKNIRDVILFPHLRNEN 442
DRL+ML T+S IRDVILFP LR N
Sbjct: 476 DRLVMLFTDSHTIRDVILFPSLRPNN 501
>gi|77359476|ref|YP_339051.1| lysyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
gi|76874387|emb|CAI85608.1| lysyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
Length = 511
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 215/433 (49%), Positives = 301/433 (69%), Gaps = 20/433 (4%)
Query: 21 DSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTNTGELSIKVSSLKLITKSL 80
D G++Q Y S ++ K+L + D GDIIG KG L K+ G+L ++++ +L+TKSL
Sbjct: 81 DMKGRVQSYASKDV-QKDLKEKYGQLDTGDIIGVKGALNKSGKGDLYVEMTEYQLLTKSL 139
Query: 81 RPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIISSIRHFMEKNDFMEVETPI 140
RPLP KF LS+QE KYR RY+DLI NE TR+ F+ R+Q++ IR F+ DFMEVETP+
Sbjct: 140 RPLPEKFHGLSDQETKYRQRYVDLITNEATRETFRIRSQVVEGIRRFLADRDFMEVETPM 199
Query: 141 LHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGFNKIFEINKNFRNEGISPR 200
L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++GGF+++FEIN+NFRNEG+S R
Sbjct: 200 LQVIPGGASARPFVTHHNALDIDMYLRIAPELYLKRLVVGGFDRVFEINRNFRNEGLSTR 259
Query: 201 HNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKI-----DYQGRLL-----DF 250
HNPEFTMIEFY AY +YI LM TE M++ + + +G+ + D G ++ DF
Sbjct: 260 HNPEFTMIEFYQAYADYIDLMNITEDMLRTVAENVLGSAVVVNTTKDENGEVIDSVEYDF 319
Query: 251 SKSFEKLTIIEAIKKYTPQYNEI---DLQNKL-FLKSELKKINPKFNQKKILNNLKKDIL 306
+ F +L++ +AI KY P+++ D +N LK+ K+++ K + + K
Sbjct: 320 GQPFTRLSMSDAILKYNPEFDAAVFNDPENHFEQLKAYAKQVHVKIPENCVWGPGK---F 376
Query: 307 QLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIANGFSEL 366
+FEET E L PT+IT YP E+SPLAR+ N EN+ +T+RFE F+ G E+ANGFSEL
Sbjct: 377 LCEIFEETAEHMLIQPTFITGYPWEVSPLARR-NDENSFVTDRFEFFVGGRELANGFSEL 435
Query: 367 NDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLIMLLTNS 426
ND ++Q+ RF Q++ K+ + E + +YD DYI ALEYG+PP +G GIG+DRL+ML T+S
Sbjct: 436 NDAQDQAERFTRQVEEKDAGDDE-AMHYDEDYIRALEYGLPPTAGEGIGIDRLVMLFTDS 494
Query: 427 KNIRDVILFPHLR 439
I+DVILFPH+R
Sbjct: 495 PTIKDVILFPHMR 507
>gi|317153108|ref|YP_004121156.1| lysyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
gi|316943359|gb|ADU62410.1| lysyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
Length = 502
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 213/439 (48%), Positives = 302/439 (68%), Gaps = 14/439 (3%)
Query: 4 RVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTNT 63
R GK++F LQ G+IQ+Y + + +G Y FK DIGDI+G +G+LF+T T
Sbjct: 75 RSFGKVTFFHLQG-----RGGRIQVYAARDDLGSEDYQLFKKTDIGDIVGIRGSLFRTKT 129
Query: 64 GELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIISS 123
GEL++K KLITKSLRPLP K+ L + E +YR RY+DLI+ TR++F RT ++
Sbjct: 130 GELTVKTRGFKLITKSLRPLPEKYHGLKDVETRYRQRYVDLIVTPRTREIFTIRTAVVRE 189
Query: 124 IRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGFN 183
+R+F+++ FMEVETP++ PGGA AKPF THHN+L+MK+++RIAPELYLKRL++GGF+
Sbjct: 190 LRNFLDEKGFMEVETPMMQAIPGGATAKPFETHHNALDMKLYMRIAPELYLKRLLVGGFD 249
Query: 184 KIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKIDY 243
+++EIN+NFRNEGIS +HNPEFTM+EFY AY N+ LM TE+M ++ G++ + Y
Sbjct: 250 RVYEINRNFRNEGISTQHNPEFTMLEFYWAYANFTDLMDLTEEMFSRVAEKVTGSSVVPY 309
Query: 244 QGRLLDFS-KSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNNLK 302
QG ++D S ++ +L E+++K + +++ E K + +K++ K
Sbjct: 310 QGEMIDLSVGAWTRLPFHESLEKIG------GIPREVYSDYEQCKALVRGRGEKVVEGDK 363
Query: 303 KDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIANG 362
LQ LF+ E KL P +I +YPT+ISPL+R+ N EN +IT+RFELF+ G E+AN
Sbjct: 364 LGKLQAKLFDILVEPKLIQPHFIYHYPTDISPLSRR-NEENPDITDRFELFMTGREMANA 422
Query: 363 FSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLIML 422
FSELNDP +Q RF+ Q+ K E E + + D DY+ ALEYGMPPA+G G+G+DRL+ML
Sbjct: 423 FSELNDPVDQRGRFEEQVKEK-EAGDEEAHFMDEDYVRALEYGMPPAAGQGVGIDRLVML 481
Query: 423 LTNSKNIRDVILFPHLRNE 441
LT+S +IR+VILFP LR E
Sbjct: 482 LTDSASIREVILFPLLRPE 500
>gi|365967543|ref|YP_004949105.1| lysyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
ANH9381]
gi|416073996|ref|ZP_11584412.1| lysyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype b str. SCC1398]
gi|444338067|ref|ZP_21151950.1| lysyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype b str. SCC4092]
gi|444348949|ref|ZP_21156493.1| lysyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype b str. S23A]
gi|348007056|gb|EGY47402.1| lysyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype b str. SCC1398]
gi|365746456|gb|AEW77361.1| lysyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
ANH9381]
gi|443545814|gb|ELT55562.1| lysyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype b str. SCC4092]
gi|443545832|gb|ELT55575.1| lysyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype b str. S23A]
Length = 502
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 211/443 (47%), Positives = 308/443 (69%), Gaps = 15/443 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLY-TDFKNYDIGDIIGAKGTLF 59
M +R MGK +FI +QD SG KIQLY++ + + + +Y D ++D+GDI+G KG+LF
Sbjct: 71 MTRRAMGKATFITIQDMSG-----KIQLYVARDNLPEGVYKDDVGHWDLGDIVGIKGSLF 125
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL++K + ++L+TK+LRPLP+KF L++QE++YR RY+DLI NE +R+ F R++
Sbjct: 126 KTKTDELTVKATKVQLLTKALRPLPDKFHGLTDQEVRYRQRYLDLISNEESRRTFIIRSK 185
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR + FMEVETP+L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 186 VVAGIREYFLSKGFMEVETPMLQVIPGGAAARPFVTHHNALDVDMYLRIAPELYLKRLVV 245
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTM+E+Y AY +Y LM TE++++K+ +D +GTT
Sbjct: 246 GGFERVFELNRNFRNEGVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTT 305
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI--DLQNKLFLKSELKKINPKFNQKKI 297
+ Y DF K FE++T+ +A KY + + DL + K+ +++ + +
Sbjct: 306 IVKYGDLEFDFGKPFERITLHDATIKYGAEKGIVKEDLYDFDRAKATAERLGIEVQKSWG 365
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L ++ FEE E L PT++ +P EISPLAR+ N EN +T+RFELFI G
Sbjct: 366 LGSIVN-----ATFEEVAEHHLIQPTFLMAHPAEISPLARR-NDENPEVTDRFELFIGGR 419
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND E+Q+ RF Q+ K E + + + D D++ ALE+G+PP +G G+G+D
Sbjct: 420 EIGNGFSELNDAEDQNDRFDAQVAAK-EAGDDEAMFKDEDFVIALEHGLPPTAGEGLGID 478
Query: 418 RLIMLLTNSKNIRDVILFPHLRN 440
RL ML N+ +IRDVILFP +R
Sbjct: 479 RLAMLYANAPSIRDVILFPAMRQ 501
>gi|149374725|ref|ZP_01892499.1| Lysyl-tRNA synthetase [Marinobacter algicola DG893]
gi|149361428|gb|EDM49878.1| Lysyl-tRNA synthetase [Marinobacter algicola DG893]
Length = 510
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 212/450 (47%), Positives = 305/450 (67%), Gaps = 28/450 (6%)
Query: 3 KRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTN 62
+ ++ + +F ++QD +G +IQ+Y S K++ D K++D+GDI+G +G L K+
Sbjct: 70 RMMLDRKAFKVVQDMTG-----RIQIYAS-----KDVQKDTKHWDLGDIVGVRGILCKSG 119
Query: 63 TGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIIS 122
G+L + + L+TKSLRPLP K + L++ E +YRHRY+DL++NE++R+VF R++IIS
Sbjct: 120 KGDLYVSMDEYVLLTKSLRPLPEKHKGLTDTEARYRHRYVDLMVNEDSRRVFYARSKIIS 179
Query: 123 SIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGF 182
+R + DFMEVETP+L PGGA A+PF+THHN+L + M+LRIAPEL+LKRL++GGF
Sbjct: 180 VMRQYFTDRDFMEVETPMLQVIPGGATARPFVTHHNALGIDMYLRIAPELFLKRLVVGGF 239
Query: 183 NKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKID 242
++FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y LM TE M++ I +GTT +
Sbjct: 240 ERVFEINRNFRNEGLSTRHNPEFTMVEFYQAYADYNDLMDLTEDMLRTIAQKVLGTTTV- 298
Query: 243 YQGRLL----------DFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKF 292
R L DF K FE+LT+++AI +Y P L ++ + K +
Sbjct: 299 VNTRTLSDGEEETIEYDFGKPFERLTVVDAILRYNPDIKAEQLADEASARQVAKDLGIHL 358
Query: 293 NQKKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFEL 352
+ L +Q+ +FE T E +L PT+IT+YP E+SPLAR + + +TERFE
Sbjct: 359 KEGWGLGK-----VQIEIFEATAEHRLMQPTFITDYPKEVSPLARCKD-NDTFVTERFEF 412
Query: 353 FIIGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGC 412
F+ G EIANGFSELND E+Q+ RF++Q+ K+ + E + +YD DY+ ALEYG+PP +G
Sbjct: 413 FVGGREIANGFSELNDAEDQAERFQDQVAEKDAGDDE-AMFYDEDYVMALEYGLPPTAGE 471
Query: 413 GIGVDRLIMLLTNSKNIRDVILFPHLRNEN 442
GIG+DRL MLLT+S +IRDVILFP +R E+
Sbjct: 472 GIGIDRLAMLLTDSASIRDVILFPAMRPEH 501
>gi|16273131|ref|NP_439367.1| lysyl-tRNA synthetase [Haemophilus influenzae Rd KW20]
gi|1174526|sp|P43825.1|SYK_HAEIN RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|1574141|gb|AAC22865.1| lysyl-tRNA synthetase (lysU) [Haemophilus influenzae Rd KW20]
Length = 502
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 213/443 (48%), Positives = 306/443 (69%), Gaps = 15/443 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLY-TDFKNYDIGDIIGAKGTLF 59
M +R MGK +FI +QD SG KIQLY++ + + + +Y D +D+GDI+G KGTLF
Sbjct: 71 MTRRAMGKATFITIQDMSG-----KIQLYVARDNLPEGVYKDDVGTWDLGDIVGIKGTLF 125
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL++K + ++L+TK+LRPLP+KF L++QE++YR RY+DLI NE +R+ F R++
Sbjct: 126 KTKTDELTVKTTEVQLLTKALRPLPDKFHGLTDQEVRYRQRYLDLISNEESRRTFIIRSK 185
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR + FMEVETP+L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 186 VVAGIREYFISKGFMEVETPMLQVIPGGASARPFVTHHNALDVDMYLRIAPELYLKRLVV 245
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTM+E+Y AY +Y LM TE++++K+ +D +GTT
Sbjct: 246 GGFERVFELNRNFRNEGVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTT 305
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI--DLQNKLFLKSELKKINPKFNQKKI 297
+ Y DF K FE++T+ +A KY + DL + K+ +++ + +
Sbjct: 306 IVKYGDLEFDFGKPFERITLHDATIKYGADKGIVKEDLYDFDRAKATAERLGIEVQKSWG 365
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L ++ I FEE E L PT++ P EISPLAR+ N EN +T+RFELFI G
Sbjct: 366 LGSIVNAI-----FEEVAEHHLIQPTFLNGSPAEISPLARR-NDENPEVTDRFELFIGGR 419
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND E+Q+ RF Q+ K E + + + D D++ ALE+G+PP +G G+G+D
Sbjct: 420 EIGNGFSELNDAEDQNERFDAQVAAK-EAGDDEAMFKDEDFVVALEHGLPPTAGEGLGID 478
Query: 418 RLIMLLTNSKNIRDVILFPHLRN 440
RL ML N+ +IRDVILFP +R
Sbjct: 479 RLAMLYANAPSIRDVILFPAMRQ 501
>gi|416060734|ref|ZP_11580964.1| LOW QUALITY PROTEIN: lysyl-tRNA synthetase [Aggregatibacter
actinomycetemcomitans serotype e str. SCC393]
gi|347998121|gb|EGY39061.1| LOW QUALITY PROTEIN: lysyl-tRNA synthetase [Aggregatibacter
actinomycetemcomitans serotype e str. SCC393]
Length = 432
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 212/443 (47%), Positives = 309/443 (69%), Gaps = 15/443 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLY-TDFKNYDIGDIIGAKGTLF 59
M +R MGK +FI +QD SG KIQLY++ + + + +Y D ++D+GDI+G KG+LF
Sbjct: 1 MTRRAMGKATFITIQDMSG-----KIQLYVARDNLPEGVYKDDVGHWDLGDIVGIKGSLF 55
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL++K + ++L+TK+LRPLP+KF L++QE++YR RY+DLI NE +R+ F R++
Sbjct: 56 KTKTDELTVKATEVQLLTKALRPLPDKFHGLTDQEVRYRQRYLDLISNEESRRTFIIRSK 115
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR + FMEVETP+L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 116 VVAGIREYFLSKGFMEVETPMLQVIPGGAAARPFVTHHNALDVDMYLRIAPELYLKRLVV 175
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTM+E+Y AY +Y LM TE++++K+ +D +GTT
Sbjct: 176 GGFERVFELNRNFRNEGVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTT 235
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI--DLQNKLFLKSELKKINPKFNQKKI 297
+ Y DF K FE++T+ AI KY + + DL + K+ +++ + +
Sbjct: 236 IVKYGDLEFDFGKPFERITLHNAIIKYGSEKGIVKEDLYDFDRAKATAERLGIEVQKSWG 295
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L ++ I FEE E L PT++ +P EISPLAR+ N EN +T+RFE+FI G
Sbjct: 296 LGSIVNAI-----FEEVAEHHLIQPTFLMAHPAEISPLARR-NDENPEVTDRFEIFIGGR 349
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND E+Q+ RF Q+ K E + + + D D++ ALE+G+PP +G G+G+D
Sbjct: 350 EIGNGFSELNDAEDQNDRFDAQVAAK-EAGDDEAMFKDEDFVIALEHGLPPTAGEGLGID 408
Query: 418 RLIMLLTNSKNIRDVILFPHLRN 440
RL ML N+ +IRDVILFP +R
Sbjct: 409 RLAMLYANAPSIRDVILFPAMRQ 431
>gi|68249757|ref|YP_248869.1| lysyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
gi|81335815|sp|Q4QL88.1|SYK_HAEI8 RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|68057956|gb|AAX88209.1| lysyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
Length = 502
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 212/443 (47%), Positives = 307/443 (69%), Gaps = 15/443 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLY-TDFKNYDIGDIIGAKGTLF 59
M +R MGK +FI +QD S KIQLY++ + + + +Y D +D+GDI+G KGTLF
Sbjct: 71 MTRRAMGKATFITIQDMSS-----KIQLYVARDNLPEGVYKDDVGTWDLGDIVGVKGTLF 125
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL++K + ++L+TK+LRPLP+KF L++QE++YR RY+DLI NE +R+ F R++
Sbjct: 126 KTKTDELTVKTTEVQLLTKALRPLPDKFHGLTDQEVRYRQRYLDLISNEESRRTFIIRSK 185
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR + FMEVETP+L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 186 VVAGIREYFISKGFMEVETPMLQVIPGGASARPFVTHHNALDVDMYLRIAPELYLKRLVV 245
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTM+E+Y AY +Y LM TE++++K+ +D +GTT
Sbjct: 246 GGFERVFELNRNFRNEGVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTT 305
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI--DLQNKLFLKSELKKINPKFNQKKI 297
+ Y DF K FE++T+ +A KY + DL + K+ +++ + +
Sbjct: 306 IVKYGEYEFDFGKPFERITLHDATVKYGADKGIVKEDLYDFDRAKATAERLGIEVQKSWG 365
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L ++ I FEE E L PT++ +P EISPLAR+ N EN ++T+RFELFI G
Sbjct: 366 LGSIVNAI-----FEEVAEHHLIQPTFLMAHPAEISPLARR-NDENPDVTDRFELFIGGR 419
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND E+Q+ RF Q+ K E + + + D D++ ALE+G+PP +G G+G+D
Sbjct: 420 EIGNGFSELNDAEDQNERFDAQVAAK-EAGDDEAMFKDEDFVVALEHGLPPTAGEGLGID 478
Query: 418 RLIMLLTNSKNIRDVILFPHLRN 440
RL ML N+ +IRDVILFP +R
Sbjct: 479 RLAMLYANAPSIRDVILFPAMRQ 501
>gi|120555184|ref|YP_959535.1| lysyl-tRNA synthetase [Marinobacter aquaeolei VT8]
gi|120325033|gb|ABM19348.1| lysyl-tRNA synthetase [Marinobacter aquaeolei VT8]
Length = 511
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 215/448 (47%), Positives = 307/448 (68%), Gaps = 28/448 (6%)
Query: 5 VMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTNTG 64
++ + +F ++QD +G +IQ+Y S K++ D K++D+GDI+G +GTL K+ G
Sbjct: 73 MLDRKAFKVVQDMTG-----RIQIYAS-----KDVQKDTKHWDMGDIVGVRGTLSKSGKG 122
Query: 65 ELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIISSI 124
+L + + L+TKSLRPLP K + L++ E +YRHRY+DL++NE++R+VF R++II+++
Sbjct: 123 DLYVTMDEYVLLTKSLRPLPEKHKGLTDTEARYRHRYVDLMVNEDSRRVFHARSKIINAM 182
Query: 125 RHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGFNK 184
R + + DFMEVETP+L PGGA A+PF+THHN+L + M+LRIAPEL+LKRL++GGF +
Sbjct: 183 RQYFAERDFMEVETPMLQVIPGGATARPFVTHHNALGIDMYLRIAPELFLKRLVVGGFER 242
Query: 185 IFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKIDYQ 244
+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y LM TE M++ I +GTT +
Sbjct: 243 VFEINRNFRNEGLSTRHNPEFTMVEFYQAYADYNDLMDLTEDMLRTITQKVLGTTTV-IN 301
Query: 245 GRLL----------DFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQ 294
R+L DF K FE+LT+++AI +Y P L + + K + +
Sbjct: 302 TRVLKDGSEETIEYDFGKPFERLTVVDAILRYNPDITREQLADDAQAREVAKNLG--IHV 359
Query: 295 KKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFI 354
K I K +Q+ +FE T E +L PT+IT YP E+SPLAR + + +TERFE F+
Sbjct: 360 KDIWGLGK---VQIEIFEATAEHRLTQPTFITEYPKEVSPLARCKD-SDPFVTERFEFFV 415
Query: 355 IGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGI 414
G EIANGFSELND E+Q+ RF+ Q+ K+ + E + +YD DY+ ALEYG+PP +G GI
Sbjct: 416 GGREIANGFSELNDAEDQAERFQAQVAEKDAGDDE-AMFYDDDYVMALEYGLPPTAGEGI 474
Query: 415 GVDRLIMLLTNSKNIRDVILFPHLRNEN 442
G+DRL MLLTNS +IRDVILFP +R E+
Sbjct: 475 GIDRLAMLLTNSPSIRDVILFPAMRPEH 502
>gi|342904885|ref|ZP_08726681.1| Lysyl-tRNA synthetase [Haemophilus haemolyticus M21621]
gi|341952341|gb|EGT78871.1| Lysyl-tRNA synthetase [Haemophilus haemolyticus M21621]
Length = 502
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 212/443 (47%), Positives = 307/443 (69%), Gaps = 15/443 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLY-TDFKNYDIGDIIGAKGTLF 59
M +R MGK +FI +QD S KIQLY++ + + + +Y D +D+GDI+G KGTLF
Sbjct: 71 MTRRAMGKATFITIQDMSS-----KIQLYVARDNLPEGVYKDDVGTWDLGDIVGVKGTLF 125
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL++K + ++L+TK+LRPLP+KF L++QE++YR RY+DLI NE +R+ F R++
Sbjct: 126 KTKTDELTVKTTEVQLLTKALRPLPDKFHGLTDQEVRYRQRYLDLISNEESRRTFIIRSK 185
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR + FMEVETP+L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 186 VVAGIREYFISKGFMEVETPMLQVIPGGASARPFVTHHNALDVDMYLRIAPELYLKRLVV 245
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTM+E+Y AY +Y LM TE++++K+ +D +GTT
Sbjct: 246 GGFERVFELNRNFRNEGVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTT 305
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI--DLQNKLFLKSELKKINPKFNQKKI 297
+ Y DF K FE++T+ +A KY + DL + K+ +++ + +
Sbjct: 306 IVKYGEYEFDFGKPFERITLHDATIKYGADKGIVKEDLYDFDRAKATAERLGIEVQKSWG 365
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L ++ I FEE E L PT++ +P EISPLAR+ N EN ++T+RFELFI G
Sbjct: 366 LGSIVNAI-----FEEVAEHHLIQPTFLMAHPAEISPLARR-NDENPDVTDRFELFIGGR 419
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND E+Q+ RF Q+ K E + + + D D++ ALE+G+PP +G G+G+D
Sbjct: 420 EIGNGFSELNDAEDQNERFDAQVAAK-EAGDDEAMFKDEDFVVALEHGLPPTAGEGLGID 478
Query: 418 RLIMLLTNSKNIRDVILFPHLRN 440
RL ML N+ +IRDVILFP +R
Sbjct: 479 RLAMLYANAPSIRDVILFPAMRQ 501
>gi|387813370|ref|YP_005428852.1| lysine tRNA synthetase [Marinobacter hydrocarbonoclasticus ATCC
49840]
gi|381338382|emb|CCG94429.1| lysine tRNA synthetase, constitutive [Marinobacter
hydrocarbonoclasticus ATCC 49840]
Length = 511
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 215/448 (47%), Positives = 307/448 (68%), Gaps = 28/448 (6%)
Query: 5 VMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFKTNTG 64
++ + +F ++QD +G +IQ+Y S K++ D K++D+GDI+G +GTL K+ G
Sbjct: 73 MLDRKAFKVVQDMTG-----RIQIYAS-----KDVQKDTKHWDMGDIVGVRGTLSKSGKG 122
Query: 65 ELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQIISSI 124
+L + + L+TKSLRPLP K + L++ E +YRHRY+DL++NE++R+VF R++II+++
Sbjct: 123 DLYVTMDEYVLLTKSLRPLPEKHKGLTDTEARYRHRYVDLMVNEDSRRVFHARSKIINAM 182
Query: 125 RHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIGGFNK 184
R + + DFMEVETP+L PGGA A+PF+THHN+L + M+LRIAPEL+LKRL++GGF +
Sbjct: 183 RQYFAERDFMEVETPMLQVIPGGATARPFVTHHNALGIDMYLRIAPELFLKRLVVGGFER 242
Query: 185 IFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTKIDYQ 244
+FEIN+NFRNEG+S RHNPEFTM+EFY AY +Y LM TE M++ I +GTT +
Sbjct: 243 VFEINRNFRNEGLSTRHNPEFTMVEFYQAYADYNDLMDLTEDMLRTITQKVLGTTTV-IN 301
Query: 245 GRLL----------DFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQ 294
R+L DF K FE+LT+++AI +Y P L + + K + +
Sbjct: 302 TRVLKDGSEETIEYDFGKPFERLTVVDAILRYNPDITREQLADDAQAREVAKNLG--IHV 359
Query: 295 KKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFI 354
K I K +Q+ +FE T E +L PT+IT YP E+SPLAR + + +TERFE F+
Sbjct: 360 KDIWGLGK---VQIEIFEATAEHRLTQPTFITEYPKEVSPLARCKD-SDPFVTERFEFFV 415
Query: 355 IGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGI 414
G EIANGFSELND E+Q+ RF+ Q+ K+ + E + +YD DY+ ALEYG+PP +G GI
Sbjct: 416 GGREIANGFSELNDAEDQAERFQAQVAEKDAGDDE-AMFYDDDYVMALEYGLPPTAGEGI 474
Query: 415 GVDRLIMLLTNSKNIRDVILFPHLRNEN 442
G+DRL MLLTNS +IRDVILFP +R E+
Sbjct: 475 GIDRLAMLLTNSPSIRDVILFPAMRPEH 502
>gi|33519727|ref|NP_878559.1| lysyl-tRNA synthetase [Candidatus Blochmannia floridanus]
gi|39932112|sp|Q7VRF5.1|SYK_BLOFL RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|33504072|emb|CAD83333.1| lysyl-tRNA synthetase [Candidatus Blochmannia floridanus]
Length = 485
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 235/448 (52%), Positives = 307/448 (68%), Gaps = 19/448 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYIS-NEIIGKNLYTD-FKNYDIGDIIGAKGTL 58
M +R+MGK SF+ L+D G IQLY + +++ + +Y K +DIGD+IG KG L
Sbjct: 50 MTRRIMGKSSFMTLRD-----GGGCIQLYFTIHDMKSQTMYFKVIKTWDIGDLIGVKGVL 104
Query: 59 FKTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRT 118
FKT TGELSI + L+TKSLR LP+KF L N E KYR RY+DLI+NE + K FK R+
Sbjct: 105 FKTRTGELSIHCKEMVLLTKSLRSLPDKFHGLRNIETKYRQRYLDLIVNEESMKTFKIRS 164
Query: 119 QIISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLI 178
IIS IR FM ++ F+EVETP++H+ PGGA+A+PF+T+HN LNM M+LRIAPELYLK+LI
Sbjct: 165 LIISEIRRFMHQHHFIEVETPMMHHIPGGALARPFVTYHNKLNMNMYLRIAPELYLKKLI 224
Query: 179 IGGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGT 238
IGGF KIFEIN+NFRNE ISP HNPEFTM+E Y AY +Y ++ F +++ + + +
Sbjct: 225 IGGFEKIFEINRNFRNESISPYHNPEFTMMEIYEAYVDYNNMIIFVQELFRTLTERILRK 284
Query: 239 TKIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKIN-PKFNQKKI 297
+ I+Y LDF K F K++I EAI Y P ++ + L + LK P NQ +
Sbjct: 285 SVIEYGDYSLDFEKPFIKMSIKEAIMYYLPDIRTKNIDDILVVFDILKFFKVPSDNQWTL 344
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
+ L ++LFEE K+ PT IT+YP E+SPLAR SN +N I +RFELFI G+
Sbjct: 345 ------EKLHMVLFEEIVSKKIIQPTCITHYPIEVSPLARCSN-DNAKIADRFELFIAGH 397
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLK---NEINGELSSY-YDTDYIHALEYGMPPASGCG 413
EI NGFSELNDP++Q RF Q K N+I+ + S+ YD DYI ALEYG+PP +G G
Sbjct: 398 EIGNGFSELNDPDDQRNRFLKQATEKMINNDIDQDESNMPYDKDYIVALEYGLPPTAGVG 457
Query: 414 IGVDRLIMLLTNSKNIRDVILFPHLRNE 441
IG+DRL+MLLTN NIRDVILFP LR++
Sbjct: 458 IGIDRLVMLLTNKHNIRDVILFPTLRSK 485
>gi|147676598|ref|YP_001210813.1| lysyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
gi|259511529|sp|A5D5Q4.1|SYK_PELTS RecName: Full=Lysine--tRNA ligase; AltName: Full=Lysyl-tRNA
synthetase; Short=LysRS
gi|146272695|dbj|BAF58444.1| lysyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
Length = 506
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 213/444 (47%), Positives = 299/444 (67%), Gaps = 21/444 (4%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
M +R MGK +F +QD G+IQ+Y+ +G Y F DIGDIIG +G++FK
Sbjct: 76 MSRRGMGKATFAHIQD-----GTGQIQIYVRLNDVGPESYELFGRLDIGDIIGVQGSVFK 130
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T GE+++ S K+++KSLRPLP K+ L + E++YR RY+DLI+N ++VF+ R++I
Sbjct: 131 TRMGEITVAAESFKILSKSLRPLPEKWHGLRDVELRYRQRYVDLIVNPEVKEVFETRSKI 190
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I + R+F++ F+EVETP++ PGGA A+PFITHHN+L+M ++LRIAPELYLKRL++G
Sbjct: 191 IRACRNFLDGKGFLEVETPMMQVIPGGAAARPFITHHNALDMDLYLRIAPELYLKRLLVG 250
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF K++EIN+NFRNEGIS +HNPEFTM+E Y AY +Y +M TE++I + ++ +GTTK
Sbjct: 251 GFEKVYEINRNFRNEGISTKHNPEFTMLELYQAYADYTDMMNLTEELISAVAVEALGTTK 310
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTP-QYNEIDLQNKLFLKSELKKI----NPKFNQK 295
I+YQG +D + + ++ ++E IK + + + + F E I +P +
Sbjct: 311 IEYQGTEIDLAPPWPRIPMLETIKVHAGLDFGALKSAEEAFKAVEQAGIGLELDPSDSWG 370
Query: 296 KILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFII 355
I+N +FEE E KL PT++ +YP EISPLA K E+ +T RFELFI
Sbjct: 371 TIVNK---------VFEEVVEPKLIQPTFVVDYPVEISPLA-KRKAEDPELTYRFELFIY 420
Query: 356 GNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIG 415
G EIAN FSELNDP +Q RF Q++ K + E + D DYI+ALEYGMPPA G GIG
Sbjct: 421 GREIANAFSELNDPIDQKGRFLKQVE-KRKAGDEEAHMMDEDYINALEYGMPPAGGLGIG 479
Query: 416 VDRLIMLLTNSKNIRDVILFPHLR 439
+DRL+MLLTNS +IRDVILFP ++
Sbjct: 480 IDRLVMLLTNSASIRDVILFPLMK 503
>gi|261867764|ref|YP_003255686.1| lysyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|415768348|ref|ZP_11483650.1| lysyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D17P-2]
gi|416102859|ref|ZP_11588971.1| lysyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype c str. SCC2302]
gi|444346477|ref|ZP_21154443.1| lysyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype c str. AAS4A]
gi|261413096|gb|ACX82467.1| lysyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|348008443|gb|EGY48715.1| lysyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype c str. SCC2302]
gi|348657917|gb|EGY75495.1| lysyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D17P-2]
gi|443541652|gb|ELT52070.1| lysyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype c str. AAS4A]
Length = 502
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 211/443 (47%), Positives = 308/443 (69%), Gaps = 15/443 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLY-TDFKNYDIGDIIGAKGTLF 59
M +R MGK +FI +QD SG KIQLY++ + + +Y D ++D+GDI+G KG+LF
Sbjct: 71 MTRRAMGKATFITIQDMSG-----KIQLYVARNNLPEGVYKDDVGHWDLGDIVGIKGSLF 125
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL++K + ++L+TK+LRPLP+KF L++QE++YR RY+DLI NE +R+ F R++
Sbjct: 126 KTKTDELTVKATKVQLLTKALRPLPDKFHGLTDQEVRYRQRYLDLISNEESRRTFIIRSK 185
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+++ IR + FMEVETP+L PGGA A+PF+THHN+L++ M+LRIAPELYLKRL++
Sbjct: 186 VVAGIREYFLSKGFMEVETPMLQVIPGGAAARPFVTHHNALDVDMYLRIAPELYLKRLVV 245
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF ++FE+N+NFRNEG+S RHNPEFTM+E+Y AY +Y LM TE++++K+ ++ +GTT
Sbjct: 246 GGFERVFELNRNFRNEGVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAINILGTT 305
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEI--DLQNKLFLKSELKKINPKFNQKKI 297
+ Y DF K FE++T+ +A KY + + DL + K+ +++ + +
Sbjct: 306 IVKYGDLEFDFGKPFERITLHDATIKYGAEKGIVKEDLYDFDRAKATAERLGIEVQKSWG 365
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
L ++ I FEE E L PT++ +P EISPLAR+ N EN +T+RFELFI G
Sbjct: 366 LGSIVNAI-----FEEVAEHHLIQPTFLMAHPAEISPLARR-NDENPEVTDRFELFIGGR 419
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EI NGFSELND E+Q+ RF Q+ K E + + + D D++ ALE+G+PP +G G+G+D
Sbjct: 420 EIGNGFSELNDAEDQNDRFDAQVAAK-EAGDDEAMFKDEDFVIALEHGLPPTAGEGLGID 478
Query: 418 RLIMLLTNSKNIRDVILFPHLRN 440
RL ML N+ +IRDVILFP +R
Sbjct: 479 RLAMLYANAPSIRDVILFPAMRQ 501
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.138 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,828,010,345
Number of Sequences: 23463169
Number of extensions: 290783679
Number of successful extensions: 808358
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 12496
Number of HSP's successfully gapped in prelim test: 1811
Number of HSP's that attempted gapping in prelim test: 757674
Number of HSP's gapped (non-prelim): 22167
length of query: 442
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 296
effective length of database: 8,933,572,693
effective search space: 2644337517128
effective search space used: 2644337517128
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 78 (34.7 bits)