BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8863
(442 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B2JIY1|SYK_BURP8 Lysine--tRNA ligase OS=Burkholderia phymatum (strain DSM 17167 /
STM815) GN=lysS PE=3 SV=1
Length = 512
Score = 593 bits (1528), Expect = e-168, Method: Compositional matrix adjust.
Identities = 268/442 (60%), Positives = 341/442 (77%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF ++D SG +IQ +I+ +G+ Y FK +D+GDI+ AKG LF+
Sbjct: 79 MLKRVMGKASFATVRDGSG-----QIQFFITPADVGEATYEAFKKWDLGDIVAAKGVLFR 133
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++ + L+L++K+LRPLP+KF L++QE++YR RY+DLI+ + RK F RT+
Sbjct: 134 TNKGELSVRCTELRLLSKALRPLPDKFHGLADQEMRYRQRYVDLIVTDEARKTFVARTKA 193
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+SSIR FM + DFMEVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRL++G
Sbjct: 194 VSSIRKFMAEADFMEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPELYLKRLVVG 253
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE++I++ +D +G
Sbjct: 254 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYKWLMDFTEQLIRQAAVDALGNAA 313
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LD SK F +LTI +AI+KY PQY++ L + FL++ELKK Q LN
Sbjct: 314 ITYQGRELDLSKPFHRLTITQAIQKYAPQYSDAQLADGAFLRTELKKFGVDATQPAFLNA 373
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E++LW PT+I +YP E+SPLAR S+ + ITERFELFI G EIA
Sbjct: 374 -GIGALQLALFEETAESQLWEPTFIIDYPIEVSPLARASD-SVDGITERFELFITGREIA 431
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RFK Q+D K+ E + YYD DYI ALEYGMPPA GCGIG+DRL+
Sbjct: 432 NGFSELNDPEDQAARFKKQVDQKD-AGDEEAMYYDADYIRALEYGMPPAGGCGIGIDRLV 490
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S +IRDVILFPHLR E+
Sbjct: 491 MLLTDSPSIRDVILFPHLRRED 512
>sp|B2SXV7|SYK_BURPP Lysine--tRNA ligase OS=Burkholderia phytofirmans (strain DSM 17436
/ PsJN) GN=lysS PE=3 SV=1
Length = 518
Score = 587 bits (1514), Expect = e-167, Method: Compositional matrix adjust.
Identities = 271/442 (61%), Positives = 340/442 (76%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF ++D SG +IQ +I+ +G+ Y FK +D+GDI+ A+G LF+
Sbjct: 85 MLKRVMGKASFATVRDGSG-----QIQFFITPTDVGQETYDAFKKWDMGDIVAARGVLFR 139
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++ + L+L++KSLRPLP+KF L++QE+KYR RY+DLI+ TRK F RT+
Sbjct: 140 TNKGELSVRCTELRLLSKSLRPLPDKFHGLADQEMKYRQRYVDLIVTPETRKTFVARTKA 199
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
ISSIR FM + DFMEVETP+LH PGGA AKPF THHN+L+M+MFLRIAPELYLKRL++G
Sbjct: 200 ISSIRKFMAEADFMEVETPMLHPIPGGAAAKPFTTHHNALDMQMFLRIAPELYLKRLVVG 259
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+S RHNPEFTMIEFYAAYT+Y WLM FTE++I++ +D +GT
Sbjct: 260 GFERVFEINRNFRNEGVSVRHNPEFTMIEFYAAYTDYKWLMDFTEQLIRQAAIDALGTAT 319
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LD +K F +LTI +AI+KY PQY L + FL++ELKK +Q + L N
Sbjct: 320 ITYQGRELDLAKPFHRLTITQAIQKYAPQYTNEQLADSAFLRTELKKFGVDASQPQFL-N 378
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E++LW PTYI +YP E+SPLAR S+ + ITERFELFI G EIA
Sbjct: 379 AGVGSLQLALFEETAESQLWEPTYIIDYPIEVSPLARASD-KVAGITERFELFITGREIA 437
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RFK Q+D K E E + +YD DYI ALEYGMPPA GCGIG+DRL+
Sbjct: 438 NGFSELNDPEDQAARFKKQVDQK-EAGDEEAMFYDADYIRALEYGMPPAGGCGIGIDRLV 496
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
M+LT+S +IRDVILFPHLR E+
Sbjct: 497 MMLTDSPSIRDVILFPHLRRED 518
>sp|Q13WZ5|SYK_BURXL Lysine--tRNA ligase OS=Burkholderia xenovorans (strain LB400)
GN=lysS PE=3 SV=1
Length = 513
Score = 587 bits (1512), Expect = e-167, Method: Compositional matrix adjust.
Identities = 271/442 (61%), Positives = 339/442 (76%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF ++D SG +IQ +I+ +G+ Y FK +D+GDI+ A+G LF+
Sbjct: 80 MLKRVMGKASFATVRDGSG-----QIQFFITPADVGQETYDAFKKWDMGDIVAARGVLFR 134
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++ + L+L++KSLRPLP+KF LS+QE+KYR RY+DLI+ TRK F RT+
Sbjct: 135 TNKGELSVRCTELRLLSKSLRPLPDKFHGLSDQEMKYRQRYVDLIVTPETRKTFVARTKA 194
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
ISSIR FM DFMEVETP+LH PGGA AKPF THHN+L+M+MFLRIAPELYLKRL++G
Sbjct: 195 ISSIRKFMADADFMEVETPMLHPIPGGAAAKPFTTHHNALDMQMFLRIAPELYLKRLVVG 254
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+S RHNPEFTMIEFYAAYT+Y WLM FTE++I++ +D +GT
Sbjct: 255 GFERVFEINRNFRNEGVSVRHNPEFTMIEFYAAYTDYKWLMDFTEQLIRQAAIDALGTAT 314
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LD +K F +LTI +AI+KY PQY L + FL++ELKK +Q + L N
Sbjct: 315 ITYQGRELDLAKPFHRLTITQAIQKYAPQYTNEQLADSAFLRTELKKFGVDASQPQFL-N 373
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E++LW PTYI +YP E+SPLAR S+ + ITERFELFI G EIA
Sbjct: 374 AGVGALQLALFEETAESQLWEPTYIIDYPIEVSPLARASD-KVEGITERFELFITGREIA 432
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF+ Q+D K+ E + +YD DYI ALEYGMPPA GCGIG+DRL+
Sbjct: 433 NGFSELNDPEDQAARFRKQVDQKD-AGDEEAMFYDADYIRALEYGMPPAGGCGIGIDRLV 491
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S +IRDVILFPHLR E+
Sbjct: 492 MLLTDSPSIRDVILFPHLRRED 513
>sp|Q8Y0L5|SYK_RALSO Lysine--tRNA ligase OS=Ralstonia solanacearum (strain GMI1000)
GN=lysS PE=3 SV=1
Length = 510
Score = 585 bits (1509), Expect = e-166, Method: Compositional matrix adjust.
Identities = 266/442 (60%), Positives = 343/442 (77%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ YI+ + +G+++Y FK++D+GDI+ A+G LF+
Sbjct: 77 MLKRVMGKASFATVQDGSG-----QIQFYITRDRVGEDVYAAFKHWDLGDIVAARGVLFR 131
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++V L+L++KSLRPLP+KF L++QE+KYR RY+DLI++ TR F+ RT+
Sbjct: 132 TNKGELSVQVQELRLLSKSLRPLPDKFHGLADQEMKYRQRYVDLIVSPETRNTFRARTKA 191
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+S+RH M FMEVETP+LH PGGA AKPFITHHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 192 IASLRHHMSDAGFMEVETPMLHPIPGGAAAKPFITHHNALDMQMFLRIAPELYLKRLIVG 251
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF +++EIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM +TE +I++ +D G+
Sbjct: 252 GFERVYEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDYTENLIRQAAIDATGSAA 311
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
++YQGR LD SK F +LTI +AI+KY PQY + L + FL++ELKK N + L N
Sbjct: 312 LNYQGRELDLSKPFHRLTICQAIQKYAPQYTDAQLADANFLRAELKKFKIDTNAPQFL-N 370
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL+LFEET E++LW PT+I +YP E+SPLAR S+ ITERFELFI G EIA
Sbjct: 371 AGVGTLQLVLFEETAESQLWEPTFIVDYPVEVSPLARGSDT-LPGITERFELFITGREIA 429
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF+ Q++ K+ E + +YD DYI ALEYGMPP GCGIG+DRL+
Sbjct: 430 NGFSELNDPEDQAERFRKQVEQKD-AGDEEAMFYDADYIRALEYGMPPTGGCGIGIDRLV 488
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S NIRDVILFPHLR E+
Sbjct: 489 MLLTDSPNIRDVILFPHLRRED 510
>sp|A4JFZ6|SYK_BURVG Lysine--tRNA ligase OS=Burkholderia vietnamiensis (strain G4 / LMG
22486) GN=lysS PE=3 SV=1
Length = 508
Score = 584 bits (1505), Expect = e-166, Method: Compositional matrix adjust.
Identities = 264/442 (59%), Positives = 337/442 (76%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ +++ +G Y FK +D+GDI+ A+G LF+
Sbjct: 75 MLKRVMGKASFATVQDGSG-----QIQFFVTPNDVGAETYDAFKKWDLGDIVAARGVLFR 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++ L+L+ K+LRPLP+KF L++QE++YR RY+DLI+ TR F+ RT+
Sbjct: 130 TNKGELSVQCKELRLLAKALRPLPDKFHGLADQEMRYRQRYVDLIVTPETRDTFRARTKT 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
ISSIR FME DFMEVETP+LH PGGA AKPFITHHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 190 ISSIRRFMENADFMEVETPMLHPIPGGAAAKPFITHHNALDMQMFLRIAPELYLKRLIVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE++I++ +D +GT
Sbjct: 250 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTEQLIRQAAIDALGTAT 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LD +K F +LTI +AI+KY PQY + L + FL++ELK++ +Q LN
Sbjct: 310 IQYQGRELDLAKPFHRLTITQAIQKYAPQYTDGQLSDDAFLRTELKRLGVDVSQPAFLNA 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E++LW PTYI +YP E+SPLAR S+ ITERFELF+ G EIA
Sbjct: 370 -GIGALQLALFEETAESQLWEPTYIIDYPVEVSPLARASDT-VPGITERFELFMTGREIA 427
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RFK Q++ K+ E + ++D DYI ALE+GMPP GCGIG+DRL+
Sbjct: 428 NGFSELNDPEDQAARFKKQVEQKD-AGDEEAMFFDADYIRALEHGMPPTGGCGIGIDRLV 486
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S IRDV+LFPHLR E+
Sbjct: 487 MLLTDSPTIRDVLLFPHLRRED 508
>sp|A9AGV1|SYK_BURM1 Lysine--tRNA ligase OS=Burkholderia multivorans (strain ATCC 17616
/ 249) GN=lysS PE=3 SV=1
Length = 508
Score = 584 bits (1505), Expect = e-166, Method: Compositional matrix adjust.
Identities = 264/442 (59%), Positives = 337/442 (76%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ +++ +G Y FK +D+GDI+ A+G LF+
Sbjct: 75 MLKRVMGKASFATVQDGSG-----QIQFFVTPNDVGAETYDAFKKWDLGDIVAARGVLFR 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS+K + L+L++K+LRPLP+KF LS+QE++YR RY+DLI+ TR F+ RT+
Sbjct: 130 TNKGELSVKCTELRLLSKALRPLPDKFHGLSDQEMRYRQRYVDLIVTPETRDTFRARTKT 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+SIR FM +FMEVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 190 IASIRKFMSDAEFMEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPELYLKRLIVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE++I++ +D +GT
Sbjct: 250 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTEQLIRQAAIDALGTAT 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LD +K F +LTI +AI+KY PQY + L + +L+SELK++ Q LN
Sbjct: 310 IQYQGRELDLAKPFHRLTITQAIQKYAPQYTDGQLSDNAYLRSELKRLGVDVTQPAFLNA 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E++LW PT+I +YP E+SPLAR S+ ITERFELFI G EIA
Sbjct: 370 -GIGALQLALFEETAESQLWEPTFIIDYPVEVSPLARASDT-VPGITERFELFITGREIA 427
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RFK Q++ K+ E + Y+D DYI ALEYGMPP GCGIG+DRL+
Sbjct: 428 NGFSELNDPEDQAARFKKQVEQKD-AGDEEAMYFDADYIRALEYGMPPTGGCGIGIDRLV 486
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S IRDV+LFPHLR E+
Sbjct: 487 MLLTDSPTIRDVLLFPHLRRED 508
>sp|Q0BDR2|SYK_BURCM Lysine--tRNA ligase OS=Burkholderia ambifaria (strain ATCC BAA-244
/ AMMD) GN=lysS PE=3 SV=1
Length = 508
Score = 582 bits (1501), Expect = e-165, Method: Compositional matrix adjust.
Identities = 261/442 (59%), Positives = 337/442 (76%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ +++ +G Y FK +D+GDI+ A+G LF+
Sbjct: 75 MLKRVMGKASFATVQDGSG-----QIQFFVTPNDVGAETYDAFKKWDLGDIVAARGVLFR 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++ L+L++K+LRPLP+KF L++QE++YR RY+DLI+ TR F+ RT+
Sbjct: 130 TNKGELSVQCKELRLLSKALRPLPDKFHGLADQEMRYRQRYVDLIVTPETRDTFRARTRT 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+SIR FM+ DFMEVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 190 IASIRKFMDNADFMEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPELYLKRLIVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE++I++ +D +GT
Sbjct: 250 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTEQLIRQAAIDALGTAT 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LD +K F +LTI +AI+KY PQY + L + FL++ELK+ +Q LN
Sbjct: 310 IQYQGRELDLAKPFHRLTITQAIQKYAPQYTDGQLSDDAFLRTELKRFGVDVSQPAFLNA 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E++LW PTYI +YP E+SPLAR S+ ITERFELF+ G EIA
Sbjct: 370 -GIGALQLALFEETAESQLWEPTYIIDYPVEVSPLARASDT-TPGITERFELFMTGREIA 427
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RFK Q++ K+ E + ++D DYI ALE+GMPP GCGIG+DRL+
Sbjct: 428 NGFSELNDPEDQAARFKKQVEQKD-AGDEEAMFFDADYIRALEHGMPPTGGCGIGIDRLV 486
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S IRDV+LFPHLR E+
Sbjct: 487 MLLTDSPTIRDVLLFPHLRRED 508
>sp|B1YT20|SYK_BURA4 Lysine--tRNA ligase OS=Burkholderia ambifaria (strain MC40-6)
GN=lysS PE=3 SV=1
Length = 508
Score = 582 bits (1501), Expect = e-165, Method: Compositional matrix adjust.
Identities = 261/442 (59%), Positives = 337/442 (76%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ +++ +G Y FK +D+GDI+ A+G LF+
Sbjct: 75 MLKRVMGKASFATVQDGSG-----QIQFFVTPNDVGAETYDAFKKWDLGDIVAARGVLFR 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++ L+L++K+LRPLP+KF L++QE++YR RY+DLI+ TR F+ RT+
Sbjct: 130 TNKGELSVQCKELRLLSKALRPLPDKFHGLADQEMRYRQRYVDLIVTPETRDTFRARTRT 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+SIR FM+ DFMEVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 190 IASIRKFMDNADFMEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPELYLKRLIVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE++I++ +D +GT
Sbjct: 250 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTEQLIRQAAIDALGTAT 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LD +K F +LTI +AI+KY PQY + L + FL++ELK+ +Q LN
Sbjct: 310 IQYQGRELDLAKPFHRLTITQAIQKYAPQYTDGQLSDDAFLRTELKRFGVDVSQPAFLNA 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E++LW PTYI +YP E+SPLAR S+ ITERFELF+ G EIA
Sbjct: 370 -GIGALQLALFEETAESQLWEPTYIIDYPVEVSPLARASDT-TPGITERFELFMTGREIA 427
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RFK Q++ K+ E + ++D DYI ALE+GMPP GCGIG+DRL+
Sbjct: 428 NGFSELNDPEDQAARFKKQVEQKD-AGDEEAMFFDADYIRALEHGMPPTGGCGIGIDRLV 486
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S IRDV+LFPHLR E+
Sbjct: 487 MLLTDSPTIRDVLLFPHLRRED 508
>sp|Q2SXD6|SYK_BURTA Lysine--tRNA ligase OS=Burkholderia thailandensis (strain E264 /
ATCC 700388 / DSM 13276 / CIP 106301) GN=lysS PE=1 SV=1
Length = 508
Score = 582 bits (1500), Expect = e-165, Method: Compositional matrix adjust.
Identities = 262/442 (59%), Positives = 334/442 (75%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ +++ +G Y FK +D+GDI+ A+G LF+
Sbjct: 75 MLKRVMGKASFATVQDGSG-----QIQFFVTPADVGAETYDAFKKWDLGDIVAARGVLFR 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS+K + L+L+ K+LRPLP+KF L++QE +YR RY+DLI+ TR F+ RT+
Sbjct: 130 TNKGELSVKCTQLRLLAKALRPLPDKFHGLADQETRYRQRYVDLIVTPETRTTFRARTKA 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+SIR FM DFMEVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 190 IASIRKFMGDADFMEVETPMLHPIPGGAAAKPFVTHHNALDMEMFLRIAPELYLKRLIVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE++I++ +D +GT
Sbjct: 250 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTERLIRQAAVDALGTAT 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LD ++ F +LTI +AI+KY P Y + L + FL+SELK++ Q LN
Sbjct: 310 IQYQGRELDLAQPFHRLTITQAIQKYAPSYTDGQLSDDAFLRSELKRLGVDVTQPAFLNA 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E +LW PT+I +YP E+SPLAR+S+ ITERFELFI G EIA
Sbjct: 370 -GIGALQLALFEETAEAQLWEPTFIIDYPIEVSPLARESDT-VAGITERFELFITGREIA 427
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RFK Q++ K+ E + ++D DYI ALEYGMPP GCGIG+DRL+
Sbjct: 428 NGFSELNDPEDQAARFKKQVEQKD-AGDEEAMFFDADYIRALEYGMPPTGGCGIGIDRLV 486
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S IRDV+LFPHLR E+
Sbjct: 487 MLLTDSPTIRDVLLFPHLRRED 508
>sp|A3NB96|SYK_BURP6 Lysine--tRNA ligase OS=Burkholderia pseudomallei (strain 668)
GN=lysS PE=3 SV=1
Length = 508
Score = 582 bits (1499), Expect = e-165, Method: Compositional matrix adjust.
Identities = 260/442 (58%), Positives = 333/442 (75%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ +++ +G Y FK +D+GDI+ A+G LF+
Sbjct: 75 MLKRVMGKASFATVQDGSG-----QIQFFVTPADVGAETYDAFKKWDLGDIVAARGVLFR 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS+K + L+L+ K+LRPLP+KF L++QE +YR RY+DLI+ TR F+ RT+
Sbjct: 130 TNKGELSVKCTELRLLAKALRPLPDKFHGLADQETRYRQRYVDLIVTPETRATFRARTKA 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+SIR FM DFMEVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 190 IASIRKFMSDADFMEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPELYLKRLIVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE++I++ +D +GT
Sbjct: 250 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTERLIRQAAVDALGTAT 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LD +K F +LTI +AI+KY P Y + L + FL+ ELK++ Q LN
Sbjct: 310 IRYQGRELDLAKPFHRLTITQAIQKYAPNYTDGQLSDDAFLRGELKRLGVDVTQPAFLNA 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E +LW PT+I +YP E+SPLAR+S+ ITERFELF+ G EIA
Sbjct: 370 -GIGALQLALFEETAEAQLWEPTFIVDYPIEVSPLARESDT-VAGITERFELFVTGREIA 427
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF+ Q++ K+ E + ++D DYI ALEYGMPP GCGIG+DRL+
Sbjct: 428 NGFSELNDPEDQAARFRKQVEQKD-AGDEEAMFFDADYIRALEYGMPPTGGCGIGIDRLV 486
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S IRDV+LFPHLR E+
Sbjct: 487 MLLTDSPTIRDVLLFPHLRRED 508
>sp|Q1LPK6|SYK_RALME Lysine--tRNA ligase OS=Ralstonia metallidurans (strain CH34 / ATCC
43123 / DSM 2839) GN=lysS PE=3 SV=1
Length = 515
Score = 581 bits (1498), Expect = e-165, Method: Compositional matrix adjust.
Identities = 270/445 (60%), Positives = 339/445 (76%), Gaps = 13/445 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ YI+ + +G+++Y FK++D+GDII A+G LF+
Sbjct: 81 MLKRVMGKASFATVQDGSG-----QIQFYITRDKVGEDVYAAFKHWDLGDIISARGELFR 135
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++V L+L++K+LRPLP+KF L++QE KYR RY+DLI++ TR F+ RTQ
Sbjct: 136 TNKGELSVQVRELRLLSKALRPLPDKFHGLADQETKYRQRYVDLIVSPETRSTFRARTQA 195
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
ISSIR M FMEVETP+LH PGGA AKPFITHHN+L+M+MF+RIAPELYLKRLI+G
Sbjct: 196 ISSIRRHMADAGFMEVETPMLHPIPGGAAAKPFITHHNALDMQMFMRIAPELYLKRLIVG 255
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE +I++ +D G+
Sbjct: 256 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTENLIRQAAIDARGSAT 315
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELK---KINPKFNQKKI 297
+ YQGR LD SK F +LTI AI+KY P+Y + L + FL++ELK KIN Q
Sbjct: 316 VTYQGRELDLSKPFHRLTICGAIQKYAPEYTDAQLADADFLRAELKNKFKINTSAPQ--- 372
Query: 298 LNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGN 357
N LQL+LFEET E +LW PTYI +YP E+SPLAR S+ + ITERFELFI G
Sbjct: 373 FLNAGLGTLQLVLFEETAEAQLWEPTYIVDYPVEVSPLARGSDTQ-PGITERFELFITGR 431
Query: 358 EIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVD 417
EIANGFSELNDPE+Q+ RF+ Q++ K+ E + Y+D DYI ALEYGMPP GCGIG+D
Sbjct: 432 EIANGFSELNDPEDQAERFRKQVEQKD-AGDEEAMYFDADYIRALEYGMPPTGGCGIGID 490
Query: 418 RLIMLLTNSKNIRDVILFPHLRNEN 442
RL+MLLT+S NIRDVILFPHLR E+
Sbjct: 491 RLVMLLTDSPNIRDVILFPHLRRED 515
>sp|B2U8U9|SYK_RALPJ Lysine--tRNA ligase OS=Ralstonia pickettii (strain 12J) GN=lysS
PE=3 SV=1
Length = 514
Score = 581 bits (1497), Expect = e-165, Method: Compositional matrix adjust.
Identities = 265/442 (59%), Positives = 341/442 (77%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD + +IQ YIS + +G+++Y FK +D+GDI+ A+GTL K
Sbjct: 81 MLKRVMGKASFATVQD-----ATDRIQFYISRDAVGEDVYASFKKWDLGDIVAARGTLMK 135
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+ V+ L+L++KSLRPLP + L++QE KYR RY+DLI+++ TR F+ RT+
Sbjct: 136 TKTGELSVAVTELRLLSKSLRPLPGDYYGLADQEQKYRQRYVDLIVSKETRDTFRARTKA 195
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
++S+R+FM N FMEVETP+LH PGGA AKPFITHHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 196 MASLRNFMAGNGFMEVETPMLHPIPGGAAAKPFITHHNALDMQMFLRIAPELYLKRLIVG 255
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF +++EIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE++I++ +D GT
Sbjct: 256 GFERVYEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTEQLIRQAAIDASGTAT 315
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQGR LD +K F +LTI +AI+KY PQY + L + FL++ELKK N + L N
Sbjct: 316 LTYQGRELDLAKPFHRLTICQAIQKYAPQYTDAQLADVDFLRAELKKFKIDTNAPQFL-N 374
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL+LFEET E++LW PT+I +YP E+SPLAR S+ ITERFELFI G EIA
Sbjct: 375 AGVGTLQLVLFEETAESQLWEPTFIIDYPVEVSPLARGSDT-LPGITERFELFITGREIA 433
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF+ Q++ K+ E + +YD DYI ALEYGMPP GCGIG+DRL+
Sbjct: 434 NGFSELNDPEDQAERFRKQVEQKD-AGDEEAMFYDADYIRALEYGMPPTGGCGIGIDRLV 492
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S NIRDVILFPHLR E+
Sbjct: 493 MLLTDSPNIRDVILFPHLRRED 514
>sp|Q3JQP3|SYK_BURP1 Lysine--tRNA ligase OS=Burkholderia pseudomallei (strain 1710b)
GN=lysS PE=3 SV=1
Length = 508
Score = 581 bits (1497), Expect = e-165, Method: Compositional matrix adjust.
Identities = 260/442 (58%), Positives = 333/442 (75%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ +++ +G Y FK +D+GDI+ A+G LF+
Sbjct: 75 MLKRVMGKASFATVQDGSG-----QIQFFVTPADVGAETYDAFKKWDLGDIVAARGVLFR 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS+K + L+L+ K+LRPLP+KF L++QE +YR RY+DLI+ TR F+ RT+
Sbjct: 130 TNKGELSVKCTELRLLAKALRPLPDKFHGLADQETRYRQRYVDLIVTPETRATFRARTKA 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+SIR FM DFMEVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 190 IASIRKFMSDADFMEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPELYLKRLIVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE++I++ +D +GT
Sbjct: 250 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTERLIRQAAVDALGTAT 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LD +K F +LTI +AI+KY P Y + L + FL+ ELK++ Q LN
Sbjct: 310 IRYQGRELDLAKPFRRLTITQAIQKYAPNYTDGQLSDDAFLRGELKRLGVDVTQPAFLNA 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E +LW PT+I +YP E+SPLAR+S+ ITERFELF+ G EIA
Sbjct: 370 -GIGALQLALFEETAEAQLWEPTFIIDYPIEVSPLARESDT-VAGITERFELFVTGREIA 427
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF+ Q++ K+ E + ++D DYI ALEYGMPP GCGIG+DRL+
Sbjct: 428 NGFSELNDPEDQAARFRKQVEQKD-AGDEEAMFFDADYIRALEYGMPPTGGCGIGIDRLV 486
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S IRDV+LFPHLR E+
Sbjct: 487 MLLTDSPTIRDVLLFPHLRRED 508
>sp|A3NX27|SYK_BURP0 Lysine--tRNA ligase OS=Burkholderia pseudomallei (strain 1106a)
GN=lysS PE=3 SV=1
Length = 508
Score = 580 bits (1496), Expect = e-165, Method: Compositional matrix adjust.
Identities = 260/442 (58%), Positives = 333/442 (75%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ +++ +G Y FK +D+GDI+ A+G LF+
Sbjct: 75 MLKRVMGKASFATVQDGSG-----QIQFFVTPADVGAETYDAFKKWDLGDIVAARGVLFR 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS+K + L+L+ K+LRPLP+KF L++QE +YR RY+DLI+ TR F+ RT+
Sbjct: 130 TNKGELSVKCTELRLLAKALRPLPDKFHGLADQETRYRQRYVDLIVTPETRATFRARTKA 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+SIR FM DFMEVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 190 IASIRKFMSDADFMEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPELYLKRLIVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE++I++ +D +GT
Sbjct: 250 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTERLIRQAAVDALGTAT 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LD +K F +LTI +AI+KY P Y + L + FL+ ELK++ Q LN
Sbjct: 310 IRYQGRELDLAKPFHRLTITQAIQKYAPNYTDGQLSDDAFLRGELKRLGVDVTQPAFLNA 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E +LW PT+I +YP E+SPLAR+S+ ITERFELF+ G EIA
Sbjct: 370 -GIGALQLALFEETAEAQLWEPTFIIDYPIEVSPLARESDT-VAGITERFELFVTGREIA 427
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF+ Q++ K+ E + ++D DYI ALEYGMPP GCGIG+DRL+
Sbjct: 428 NGFSELNDPEDQAARFRKQVEQKD-AGDEEAMFFDADYIRALEYGMPPTGGCGIGIDRLV 486
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S IRDV+LFPHLR E+
Sbjct: 487 MLLTDSPTIRDVLLFPHLRRED 508
>sp|A1V5L6|SYK_BURMS Lysine--tRNA ligase OS=Burkholderia mallei (strain SAVP1) GN=lysS
PE=3 SV=1
Length = 508
Score = 580 bits (1496), Expect = e-165, Method: Compositional matrix adjust.
Identities = 260/442 (58%), Positives = 333/442 (75%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ +++ +G Y FK +D+GDI+ A+G LF+
Sbjct: 75 MLKRVMGKASFATVQDGSG-----QIQFFVTPADVGAETYDAFKKWDLGDIVAARGVLFR 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS+K + L+L+ K+LRPLP+KF L++QE +YR RY+DLI+ TR F+ RT+
Sbjct: 130 TNKGELSVKCTELRLLAKALRPLPDKFHGLADQETRYRQRYVDLIVTPETRATFRARTKA 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+SIR FM DFMEVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 190 IASIRKFMSDADFMEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPELYLKRLIVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE++I++ +D +GT
Sbjct: 250 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTERLIRQAAVDALGTAT 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LD +K F +LTI +AI+KY P Y + L + FL+ ELK++ Q LN
Sbjct: 310 IRYQGRELDLAKPFHRLTITQAIQKYAPNYTDGQLSDDAFLRGELKRLGVDVTQPAFLNA 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E +LW PT+I +YP E+SPLAR+S+ ITERFELF+ G EIA
Sbjct: 370 -GIGALQLALFEETAEAQLWEPTFIIDYPIEVSPLARESDT-VAGITERFELFVTGREIA 427
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF+ Q++ K+ E + ++D DYI ALEYGMPP GCGIG+DRL+
Sbjct: 428 NGFSELNDPEDQAARFRKQVEQKD-AGDEEAMFFDADYIRALEYGMPPTGGCGIGIDRLV 486
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S IRDV+LFPHLR E+
Sbjct: 487 MLLTDSPTIRDVLLFPHLRRED 508
>sp|Q62IZ9|SYK_BURMA Lysine--tRNA ligase OS=Burkholderia mallei (strain ATCC 23344)
GN=lysS PE=3 SV=1
Length = 508
Score = 580 bits (1496), Expect = e-165, Method: Compositional matrix adjust.
Identities = 260/442 (58%), Positives = 333/442 (75%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ +++ +G Y FK +D+GDI+ A+G LF+
Sbjct: 75 MLKRVMGKASFATVQDGSG-----QIQFFVTPADVGAETYDAFKKWDLGDIVAARGVLFR 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS+K + L+L+ K+LRPLP+KF L++QE +YR RY+DLI+ TR F+ RT+
Sbjct: 130 TNKGELSVKCTELRLLAKALRPLPDKFHGLADQETRYRQRYVDLIVTPETRATFRARTKA 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+SIR FM DFMEVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 190 IASIRKFMSDADFMEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPELYLKRLIVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE++I++ +D +GT
Sbjct: 250 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTERLIRQAAVDALGTAT 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LD +K F +LTI +AI+KY P Y + L + FL+ ELK++ Q LN
Sbjct: 310 IRYQGRELDLAKPFHRLTITQAIQKYAPNYTDGQLSDDAFLRGELKRLGVDVTQPAFLNA 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E +LW PT+I +YP E+SPLAR+S+ ITERFELF+ G EIA
Sbjct: 370 -GIGALQLALFEETAEAQLWEPTFIIDYPIEVSPLARESDT-VAGITERFELFVTGREIA 427
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF+ Q++ K+ E + ++D DYI ALEYGMPP GCGIG+DRL+
Sbjct: 428 NGFSELNDPEDQAARFRKQVEQKD-AGDEEAMFFDADYIRALEYGMPPTGGCGIGIDRLV 486
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S IRDV+LFPHLR E+
Sbjct: 487 MLLTDSPTIRDVLLFPHLRRED 508
>sp|A2SAT3|SYK_BURM9 Lysine--tRNA ligase OS=Burkholderia mallei (strain NCTC 10229)
GN=lysS PE=3 SV=1
Length = 508
Score = 580 bits (1496), Expect = e-165, Method: Compositional matrix adjust.
Identities = 260/442 (58%), Positives = 333/442 (75%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ +++ +G Y FK +D+GDI+ A+G LF+
Sbjct: 75 MLKRVMGKASFATVQDGSG-----QIQFFVTPADVGAETYDAFKKWDLGDIVAARGVLFR 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS+K + L+L+ K+LRPLP+KF L++QE +YR RY+DLI+ TR F+ RT+
Sbjct: 130 TNKGELSVKCTELRLLAKALRPLPDKFHGLADQETRYRQRYVDLIVTPETRATFRARTKA 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+SIR FM DFMEVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 190 IASIRKFMSDADFMEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPELYLKRLIVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE++I++ +D +GT
Sbjct: 250 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTERLIRQAAVDALGTAT 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LD +K F +LTI +AI+KY P Y + L + FL+ ELK++ Q LN
Sbjct: 310 IRYQGRELDLAKPFHRLTITQAIQKYAPNYTDGQLSDDAFLRGELKRLGVDVTQPAFLNA 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E +LW PT+I +YP E+SPLAR+S+ ITERFELF+ G EIA
Sbjct: 370 -GIGALQLALFEETAEAQLWEPTFIIDYPIEVSPLARESDT-VAGITERFELFVTGREIA 427
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF+ Q++ K+ E + ++D DYI ALEYGMPP GCGIG+DRL+
Sbjct: 428 NGFSELNDPEDQAARFRKQVEQKD-AGDEEAMFFDADYIRALEYGMPPTGGCGIGIDRLV 486
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S IRDV+LFPHLR E+
Sbjct: 487 MLLTDSPTIRDVLLFPHLRRED 508
>sp|A3ML91|SYK_BURM7 Lysine--tRNA ligase OS=Burkholderia mallei (strain NCTC 10247)
GN=lysS PE=3 SV=1
Length = 508
Score = 580 bits (1496), Expect = e-165, Method: Compositional matrix adjust.
Identities = 260/442 (58%), Positives = 333/442 (75%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ +++ +G Y FK +D+GDI+ A+G LF+
Sbjct: 75 MLKRVMGKASFATVQDGSG-----QIQFFVTPADVGAETYDAFKKWDLGDIVAARGVLFR 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS+K + L+L+ K+LRPLP+KF L++QE +YR RY+DLI+ TR F+ RT+
Sbjct: 130 TNKGELSVKCTELRLLAKALRPLPDKFHGLADQETRYRQRYVDLIVTPETRATFRARTKA 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+SIR FM DFMEVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 190 IASIRKFMSDADFMEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPELYLKRLIVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE++I++ +D +GT
Sbjct: 250 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTERLIRQAAVDALGTAT 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LD +K F +LTI +AI+KY P Y + L + FL+ ELK++ Q LN
Sbjct: 310 IRYQGRELDLAKPFHRLTITQAIQKYAPNYTDGQLSDDAFLRGELKRLGVDVTQPAFLNA 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E +LW PT+I +YP E+SPLAR+S+ ITERFELF+ G EIA
Sbjct: 370 -GIGALQLALFEETAEAQLWEPTFIIDYPIEVSPLARESDT-VAGITERFELFVTGREIA 427
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF+ Q++ K+ E + ++D DYI ALEYGMPP GCGIG+DRL+
Sbjct: 428 NGFSELNDPEDQAARFRKQVEQKD-AGDEEAMFFDADYIRALEYGMPPTGGCGIGIDRLV 486
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S IRDV+LFPHLR E+
Sbjct: 487 MLLTDSPTIRDVLLFPHLRRED 508
>sp|Q63SN9|SYK_BURPS Lysine--tRNA ligase OS=Burkholderia pseudomallei (strain K96243)
GN=lysS PE=3 SV=1
Length = 508
Score = 580 bits (1496), Expect = e-165, Method: Compositional matrix adjust.
Identities = 260/442 (58%), Positives = 333/442 (75%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ +++ +G Y FK +D+GDI+ A+G LF+
Sbjct: 75 MLKRVMGKASFATVQDGSG-----QIQFFVTPADVGAETYDAFKKWDLGDIVAARGVLFR 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS+K + L+L+ K+LRPLP+KF L++QE +YR RY+DLI+ TR F+ RT+
Sbjct: 130 TNKGELSVKCTELRLLAKALRPLPDKFHGLADQETRYRQRYVDLIVTPETRATFRARTKA 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+SIR FM DFMEVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 190 IASIRKFMSDADFMEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPELYLKRLIVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE++I++ +D +GT
Sbjct: 250 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTERLIRQAAVDALGTAT 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LD +K F +LTI +AI+KY P Y + L + FL+ ELK++ Q LN
Sbjct: 310 IRYQGRELDLAKPFHRLTITQAIQKYAPNYTDGQLSDDAFLRGELKRLGVDVTQPAFLNA 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E +LW PT+I +YP E+SPLAR+S+ ITERFELF+ G EIA
Sbjct: 370 -GIGALQLALFEETAEAQLWEPTFIIDYPIEVSPLARESDT-VAGITERFELFVTGREIA 427
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF+ Q++ K+ E + ++D DYI ALEYGMPP GCGIG+DRL+
Sbjct: 428 NGFSELNDPEDQAARFRKQVEQKD-AGDEEAMFFDADYIRALEYGMPPTGGCGIGIDRLV 486
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S IRDV+LFPHLR E+
Sbjct: 487 MLLTDSPTIRDVLLFPHLRRED 508
>sp|Q473I5|SYK_CUPPJ Lysine--tRNA ligase OS=Cupriavidus pinatubonensis (strain JMP134 /
LMG 1197) GN=lysS PE=3 SV=1
Length = 516
Score = 580 bits (1495), Expect = e-165, Method: Compositional matrix adjust.
Identities = 266/442 (60%), Positives = 340/442 (76%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ YI+ + +G+++Y FK++D+GDII A+G LF+
Sbjct: 83 MLKRVMGKASFATVQDGSG-----QIQFYITRDKVGEDVYAAFKHWDLGDIISARGVLFR 137
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++V L+L++KSLRPLP+KF L++QE+KYR RY+DLI++ TR F+ RT+
Sbjct: 138 TNKGELSVQVQELRLLSKSLRPLPDKFHGLADQEMKYRQRYVDLIVSPETRNTFRARTKA 197
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+SS+R M FMEVETP+LH PGGA AKPFITHHN+L+M+MF+RIAPELYLKRLI+G
Sbjct: 198 MSSLRRHMSDAGFMEVETPMLHPIPGGAAAKPFITHHNALDMQMFMRIAPELYLKRLIVG 257
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE +I++ +D GT
Sbjct: 258 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTENLIRQAAIDASGTAV 317
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQGR LD SK F +LTI +AI+K+ PQY + L + FL++ELKK + + L N
Sbjct: 318 LTYQGRELDLSKPFHRLTICQAIQKFAPQYTDAQLADADFLRTELKKFGVNTSAPQFL-N 376
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL+LFEET E++LW PT+I +YP E+SPLAR S+ ITERFELFI G EIA
Sbjct: 377 AGIGTLQLVLFEETAESQLWEPTFIVDYPVEVSPLARASDT-VPGITERFELFITGREIA 435
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RF+ Q++ K+ E + YYD DYI ALEYGMPP GCGIG+DRL+
Sbjct: 436 NGFSELNDAEDQADRFRKQVEQKD-AGDEEAMYYDADYIRALEYGMPPTGGCGIGIDRLV 494
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S NIRDVILFPHLR E+
Sbjct: 495 MLLTDSPNIRDVILFPHLRRED 516
>sp|A0K8P2|SYK_BURCH Lysine--tRNA ligase OS=Burkholderia cenocepacia (strain HI2424)
GN=lysS PE=3 SV=1
Length = 508
Score = 580 bits (1495), Expect = e-165, Method: Compositional matrix adjust.
Identities = 261/442 (59%), Positives = 336/442 (76%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ +++ +G + Y FK +D+GDI+ A+G LF+
Sbjct: 75 MLKRVMGKASFATVQDGSG-----QIQFFVTPNDVGADTYDAFKKWDLGDIVAARGVLFR 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++ L+L++K+LRPLP+KF LS+QE++YR RY+DLI+ TR F+ RT+
Sbjct: 130 TNKGELSVQCKELRLLSKALRPLPDKFHGLSDQEMRYRQRYVDLIVTPETRDTFRARTKT 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+SIR FM+ DFMEVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 190 IASIRKFMDNADFMEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPELYLKRLIVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE++I++ +D +GT
Sbjct: 250 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTEQLIRQAAIDALGTAT 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LD +K F +LTI +AI+KY P Y + L + FL++ELK+ +Q LN
Sbjct: 310 IQYQGRELDLAKPFHRLTITQAIQKYAPDYTDGQLSDDAFLRTELKRFGVDVSQPAFLNA 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E +LW PT+I +YP E+SPLAR S+ ITERFELF+ G EIA
Sbjct: 370 -GIGALQLALFEETAEAQLWEPTFIIDYPVEVSPLARASDT-VPGITERFELFMTGREIA 427
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RFK Q++ K+ E + ++D DYI ALEYGMPP GCGIG+DRL+
Sbjct: 428 NGFSELNDPEDQAARFKKQVEQKD-AGDEEAMFFDADYIRALEYGMPPTGGCGIGIDRLV 486
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S IRDV+LFPHLR E+
Sbjct: 487 MLLTDSPTIRDVLLFPHLRRED 508
>sp|B1JUZ7|SYK_BURCC Lysine--tRNA ligase OS=Burkholderia cenocepacia (strain MC0-3)
GN=lysS PE=3 SV=1
Length = 508
Score = 580 bits (1495), Expect = e-165, Method: Compositional matrix adjust.
Identities = 261/442 (59%), Positives = 336/442 (76%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ +++ +G + Y FK +D+GDI+ A+G LF+
Sbjct: 75 MLKRVMGKASFATVQDGSG-----QIQFFVTPNDVGADTYDAFKKWDLGDIVAARGVLFR 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++ L+L++K+LRPLP+KF LS+QE++YR RY+DLI+ TR F+ RT+
Sbjct: 130 TNKGELSVQCKELRLLSKALRPLPDKFHGLSDQEMRYRQRYVDLIVTPETRDTFRARTKT 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+SIR FM+ DFMEVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 190 IASIRKFMDNADFMEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPELYLKRLIVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE++I++ +D +GT
Sbjct: 250 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTEQLIRQAAIDALGTAT 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LD +K F +LTI +AI+KY P Y + L + FL++ELK+ +Q LN
Sbjct: 310 IQYQGRELDLAKPFHRLTITQAIQKYAPDYTDGQLSDDAFLRTELKRFGVDVSQPAFLNA 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E +LW PT+I +YP E+SPLAR S+ ITERFELF+ G EIA
Sbjct: 370 -GIGALQLALFEETAEAQLWEPTFIIDYPVEVSPLARASDT-VPGITERFELFMTGREIA 427
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RFK Q++ K+ E + ++D DYI ALEYGMPP GCGIG+DRL+
Sbjct: 428 NGFSELNDPEDQAARFKKQVEQKD-AGDEEAMFFDADYIRALEYGMPPTGGCGIGIDRLV 486
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S IRDV+LFPHLR E+
Sbjct: 487 MLLTDSPTIRDVLLFPHLRRED 508
>sp|Q1BHT1|SYK_BURCA Lysine--tRNA ligase OS=Burkholderia cenocepacia (strain AU 1054)
GN=lysS PE=3 SV=1
Length = 508
Score = 580 bits (1495), Expect = e-165, Method: Compositional matrix adjust.
Identities = 261/442 (59%), Positives = 336/442 (76%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ +++ +G + Y FK +D+GDI+ A+G LF+
Sbjct: 75 MLKRVMGKASFATVQDGSG-----QIQFFVTPNDVGADTYDAFKKWDLGDIVAARGVLFR 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++ L+L++K+LRPLP+KF LS+QE++YR RY+DLI+ TR F+ RT+
Sbjct: 130 TNKGELSVQCKELRLLSKALRPLPDKFHGLSDQEMRYRQRYVDLIVTPETRDTFRARTKT 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+SIR FM+ DFMEVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 190 IASIRKFMDNADFMEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPELYLKRLIVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE++I++ +D +GT
Sbjct: 250 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTEQLIRQAAIDALGTAT 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LD +K F +LTI +AI+KY P Y + L + FL++ELK+ +Q LN
Sbjct: 310 IQYQGRELDLAKPFHRLTITQAIQKYAPDYTDGQLSDDAFLRTELKRFGVDVSQPAFLNA 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E +LW PT+I +YP E+SPLAR S+ ITERFELF+ G EIA
Sbjct: 370 -GIGALQLALFEETAEAQLWEPTFIIDYPVEVSPLARASDT-VPGITERFELFMTGREIA 427
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RFK Q++ K+ E + ++D DYI ALEYGMPP GCGIG+DRL+
Sbjct: 428 NGFSELNDPEDQAARFKKQVEQKD-AGDEEAMFFDADYIRALEYGMPPTGGCGIGIDRLV 486
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S IRDV+LFPHLR E+
Sbjct: 487 MLLTDSPTIRDVLLFPHLRRED 508
>sp|B4EDB2|SYK_BURCJ Lysine--tRNA ligase OS=Burkholderia cepacia (strain J2315 / LMG
16656) GN=lysS PE=3 SV=1
Length = 508
Score = 579 bits (1492), Expect = e-164, Method: Compositional matrix adjust.
Identities = 261/442 (59%), Positives = 335/442 (75%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ +++ +G Y FK +D+GDI+ A+G LF+
Sbjct: 75 MLKRVMGKASFATVQDGSG-----QIQFFVTPNDVGAETYDAFKKWDLGDIVAARGVLFR 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++ L+L++K+LRPLP+KF LS+QE++YR RY+DLI+ TR F+ RT+
Sbjct: 130 TNKGELSVQCKELRLLSKALRPLPDKFHGLSDQEMRYRQRYVDLIVTPETRDTFRARTKT 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+SIR FM+ DFMEVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 190 IASIRKFMDNADFMEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPELYLKRLIVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE++I++ +D +GT
Sbjct: 250 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTEQLIRQAAIDALGTAT 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQGR LD +K F +LTI +AI+KY P Y + L + FL++ELK+ +Q LN
Sbjct: 310 IQYQGRELDLAKPFHRLTITQAIQKYAPDYTDGQLSDDAFLRTELKRFGVDVSQPAFLNA 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E +LW PT+I +YP E+SPLAR S+ ITERFELF+ G EIA
Sbjct: 370 -GIGALQLALFEETAEAQLWEPTFIIDYPVEVSPLARASDT-VPGITERFELFMTGREIA 427
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RFK Q++ K+ E + ++D DYI ALEYGMPP GCGIG+DRL+
Sbjct: 428 NGFSELNDPEDQAARFKKQVEQKD-AGDEEAMFFDADYIRALEYGMPPTGGCGIGIDRLV 486
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S IRDV+LFPHLR E+
Sbjct: 487 MLLTDSPTIRDVLLFPHLRRED 508
>sp|A4G778|SYK_HERAR Lysine--tRNA ligase OS=Herminiimonas arsenicoxydans GN=lysS PE=3
SV=1
Length = 511
Score = 578 bits (1490), Expect = e-164, Method: Compositional matrix adjust.
Identities = 267/443 (60%), Positives = 335/443 (75%), Gaps = 8/443 (1%)
Query: 1 MLKRVMGK-ISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLF 59
MLKR GK +F LQD SG ++G+IQ+Y++ + G+ +YD+GDI+G GTLF
Sbjct: 76 MLKREAGKKAAFATLQDASGSKADGRIQIYVTLNLTGEAAMAALHHYDLGDILGVSGTLF 135
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL+IKVS L+LITKSLRPLP+KF L++QE KYR RY+DLI+NE+TR+ FK RT
Sbjct: 136 KTKTDELTIKVSELRLITKSLRPLPDKFHGLADQETKYRQRYVDLIMNEDTRRTFKARTA 195
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
ISSIR FME+NDFMEVETP+LH PGGA AKPF THHN+L+M+MFLRIAPELYLKRL++
Sbjct: 196 AISSIRRFMERNDFMEVETPMLHTIPGGAAAKPFTTHHNALDMEMFLRIAPELYLKRLVV 255
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF+++FEIN+NFRNEG+S RHNPEFTM+EFYAAYT+Y WLM FTE +I++ +D GT
Sbjct: 256 GGFDRVFEINRNFRNEGVSIRHNPEFTMMEFYAAYTDYKWLMDFTEAVIRQAAIDAHGTA 315
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y GR LD +K F +LTI+ AI K+ PQY L + ++K+ELKK K + L
Sbjct: 316 TLTYGGRELDLAKPFHRLTIVGAINKFAPQYTHEQLHDAEYIKAELKKFGVKPHAHSGLG 375
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
LQL LFEET E +LW PTYI +YP E+SPLAR S+ ITERFELF++G EI
Sbjct: 376 -----ALQLALFEETAEAQLWEPTYIIDYPVEVSPLARASDT-VAGITERFELFMVGREI 429
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
ANGFSELND E+Q+ RF+ Q+ K+ E + YYD DYI ALEYGMPP GCGIG+DRL
Sbjct: 430 ANGFSELNDAEDQAARFQAQVAAKD-AGDEEAMYYDADYIRALEYGMPPTGGCGIGIDRL 488
Query: 420 IMLLTNSKNIRDVILFPHLRNEN 442
+M++T+S NIRDV+LFPHLR E+
Sbjct: 489 MMIITDSPNIRDVLLFPHLRRED 511
>sp|B3R478|SYK_CUPTR Lysine--tRNA ligase OS=Cupriavidus taiwanensis (strain R1 / LMG
19424) GN=lysS PE=3 SV=1
Length = 517
Score = 577 bits (1486), Expect = e-164, Method: Compositional matrix adjust.
Identities = 267/442 (60%), Positives = 337/442 (76%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ YI+ + +G+ +Y FK++D+GDII A+G LF+
Sbjct: 84 MLKRVMGKASFATVQDGSG-----QIQFYITRDKVGEEVYAAFKHWDLGDIISARGELFR 138
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++V L+L++KSLRPLP+KF L++QE+KYR RY+DLI++ TR F+ RT
Sbjct: 139 TNKGELSVQVRELRLLSKSLRPLPDKFHGLADQEMKYRQRYVDLIVSPETRNTFRARTDA 198
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
ISS+R M FMEVETP+LH PGGA AKPFITHHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 199 ISSLRRHMADAGFMEVETPMLHPIPGGAAAKPFITHHNALDMQMFLRIAPELYLKRLIVG 258
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE +I+K +D G+
Sbjct: 259 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTEDLIRKAAIDARGSAV 318
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQ R LD SK F +LTI +AI+K+ PQY + L + FL++ELKK N + L N
Sbjct: 319 LTYQDRELDLSKPFHRLTICQAIQKFAPQYTDAQLADAEFLRTELKKFGVNTNAPQFL-N 377
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL+LFEET E++LW PT+I +YP E+SPLAR S+ ITERFELFI G EIA
Sbjct: 378 AGLGTLQLVLFEETAESQLWEPTFIVDYPVEVSPLARASDT-VPGITERFELFITGREIA 436
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RF+ Q++ K+ E + Y+D DYI ALEYGMPP GCGIG+DRL+
Sbjct: 437 NGFSELNDAEDQADRFRKQVEQKD-AGDEEAMYFDADYIRALEYGMPPTGGCGIGIDRLV 495
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S NIRDVILFPHLR E+
Sbjct: 496 MLLTDSPNIRDVILFPHLRKED 517
>sp|A6SXF3|SYK_JANMA Lysine--tRNA ligase OS=Janthinobacterium sp. (strain Marseille)
GN=lysS PE=3 SV=1
Length = 511
Score = 576 bits (1485), Expect = e-163, Method: Compositional matrix adjust.
Identities = 266/443 (60%), Positives = 335/443 (75%), Gaps = 8/443 (1%)
Query: 1 MLKRVMGK-ISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLF 59
MLKR GK +F LQD SG ++G+IQ+Y + ++ G+ +YD+GDI+G GTLF
Sbjct: 76 MLKREAGKKAAFATLQDASGAKADGRIQIYATLDLTGEAAMAALHHYDLGDILGVVGTLF 135
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KT T EL+IKV+ L+L+TKSLRPLP+KF L++QE KYR RY+DLI+NE+TR+ FK RT
Sbjct: 136 KTKTDELTIKVTELRLLTKSLRPLPDKFHGLADQETKYRQRYVDLIMNEDTRRTFKARTA 195
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
ISSIR FM +NDFMEVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRL++
Sbjct: 196 AISSIRRFMAENDFMEVETPMLHTIPGGAAAKPFVTHHNALDMEMFLRIAPELYLKRLVV 255
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF+++FEIN+NFRNEG+S RHNPEFTM+EFYAAYT+Y WLM FTE +I++ +D GT
Sbjct: 256 GGFDRVFEINRNFRNEGVSIRHNPEFTMMEFYAAYTDYKWLMDFTEAVIRQAAIDAHGTA 315
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+ Y GR LD +K F +LTI+ AI KY PQY L + F+K+ELKK K + L
Sbjct: 316 TLTYGGRELDLAKPFHRLTIVGAINKYAPQYTNEQLHDAEFIKAELKKFGVKPHAHSGLG 375
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
LQL LFEET E +LW PTYI +YP E+SPLAR S+ ITERFELF++G EI
Sbjct: 376 -----ALQLALFEETAEAQLWEPTYIIDYPVEVSPLARASDT-VAGITERFELFMVGREI 429
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRL 419
ANGFSELND E+Q+ RF+ Q+ K+ E + YYD DYI ALEYGMPP GCGIG+DRL
Sbjct: 430 ANGFSELNDAEDQAARFQAQVAAKD-AGDEEAMYYDADYIRALEYGMPPTGGCGIGIDRL 488
Query: 420 IMLLTNSKNIRDVILFPHLRNEN 442
+M++T+S NIRDV+LFPHLR E+
Sbjct: 489 MMIITDSPNIRDVLLFPHLRRED 511
>sp|Q0KCG3|SYK_CUPNH Lysine--tRNA ligase OS=Cupriavidus necator (strain ATCC 17699 / H16
/ DSM 428 / Stanier 337) GN=lysS PE=3 SV=1
Length = 514
Score = 574 bits (1480), Expect = e-163, Method: Compositional matrix adjust.
Identities = 266/442 (60%), Positives = 336/442 (76%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ YI+ + +G+ +Y FK++D+GDII A+G LF+
Sbjct: 81 MLKRVMGKASFATVQDGSG-----QIQFYITRDKVGEEVYAAFKHWDLGDIISARGELFR 135
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++V L+L++KSLRPLP+KF L++QE+KYR RY+DLI++ TR F+ RT
Sbjct: 136 TNKGELSVQVRELRLLSKSLRPLPDKFHGLADQEMKYRQRYVDLIVSPETRNTFRARTNA 195
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
ISS+R M FMEVETP+LH PGGA AKPFITHHN+L+M+MF+RIAPELYLKRLI+G
Sbjct: 196 ISSLRRHMADAGFMEVETPMLHPIPGGAAAKPFITHHNALDMQMFMRIAPELYLKRLIVG 255
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE +I+K +D G+
Sbjct: 256 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTEDLIRKAAIDARGSAV 315
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQ R LD SK F +LTI +AI+K+ PQY + L + FL++ELKK N + L N
Sbjct: 316 LTYQDRELDLSKPFHRLTICQAIQKFAPQYTDAQLADAGFLRTELKKFGVNTNAPQFL-N 374
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL+LFEET E +LW PT+I +YP E+SPLAR S+ ITERFELFI G EIA
Sbjct: 375 AGLGTLQLVLFEETAENQLWEPTFIVDYPVEVSPLARASDT-VPGITERFELFITGREIA 433
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RF+ Q++ K+ E + Y+D DYI ALEYGMPP GCGIG+DRL+
Sbjct: 434 NGFSELNDAEDQADRFRKQVEQKD-AGDEEAMYFDADYIRALEYGMPPTGGCGIGIDRLV 492
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S NIRDVILFPHLR E+
Sbjct: 493 MLLTDSPNIRDVILFPHLRRED 514
>sp|A9IQY2|SYK_BORPD Lysine--tRNA ligase OS=Bordetella petrii (strain ATCC BAA-461 / DSM
12804 / CCUG 43448) GN=lysS PE=3 SV=1
Length = 506
Score = 564 bits (1454), Expect = e-160, Method: Compositional matrix adjust.
Identities = 253/442 (57%), Positives = 330/442 (74%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ+Y+ +G Y FK +DIGDII +G++FK
Sbjct: 73 MLKRVMGKASFATVQDGSG-----RIQIYLDRGTLGDEAYAAFKQWDIGDIIAIEGSVFK 127
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS+ ++ +L++KSLRPLP+KF +++QE++YR RY+DLI+ + TR+ F+ R++
Sbjct: 128 TNKGELSVHAATARLLSKSLRPLPDKFHGVADQELRYRQRYVDLIMTDATRRTFETRSKA 187
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+ SIR M F+EVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 188 VGSIRQVMLDAGFLEVETPMLHPIPGGAAAKPFVTHHNALDMEMFLRIAPELYLKRLIVG 247
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAY +Y WLM FTE ++++ + G+
Sbjct: 248 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYADYRWLMDFTEHVLRQAAIAATGSAV 307
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQ R LD S+ F++LTI EAI KY P Y + L + F+++ELKK+ + +L
Sbjct: 308 LTYQDRELDLSRPFDRLTICEAILKYAPAYTQAQLDDAAFVRAELKKLGADVD-GPVLAR 366
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E +LWNPTYI +YP E+SPLAR S+ ITERFELF+ G EIA
Sbjct: 367 AGLGALQLALFEETAEAQLWNPTYIIDYPVEVSPLARASDT-RPGITERFELFMTGREIA 425
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF+ Q++ K+ E + Y+D DYI ALEYGMPP GCGIG+DRL+
Sbjct: 426 NGFSELNDPEDQAERFRAQVEAKD-AGDEEAMYFDADYIRALEYGMPPTGGCGIGIDRLV 484
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLTNS +IRDVILFPHLR E+
Sbjct: 485 MLLTNSPSIRDVILFPHLRRED 506
>sp|Q1H372|SYK_METFK Lysine--tRNA ligase OS=Methylobacillus flagellatus (strain KT /
ATCC 51484 / DSM 6875) GN=lysS PE=3 SV=1
Length = 509
Score = 561 bits (1447), Expect = e-159, Method: Compositional matrix adjust.
Identities = 266/442 (60%), Positives = 339/442 (76%), Gaps = 12/442 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ++I+ E +G+ Y FK +D+GDII A+GTLFK
Sbjct: 80 MLKRVMGKASFATVQDRSG-----RIQIFITRENVGEATYDAFKKWDLGDIIAARGTLFK 134
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+KVS L+L+TKSLRPLP KF L++QE KYR RY+DLI++E TRK F R++I
Sbjct: 135 TKTGELSVKVSELRLLTKSLRPLPEKFHGLADQETKYRQRYVDLIVSEETRKTFVARSKI 194
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+++IR FM ++F+EVETP+LH PGGA AKPFITHHN+L+++M++RIAPELYLKRL++G
Sbjct: 195 VAAIRAFMLSHEFLEVETPMLHPIPGGAAAKPFITHHNALDLQMYMRIAPELYLKRLVVG 254
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+S RHNPEFTM+EFYAAYT+Y WLM FTE I+ + G+
Sbjct: 255 GFERVFEINRNFRNEGLSVRHNPEFTMMEFYAAYTDYKWLMDFTESCIRAAAIAACGSAV 314
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
++YQGR LD K FE+LTII AI+KY PQY L ++ FL+ ELKK + L +
Sbjct: 315 VEYQGRELDLGKPFERLTIIGAIQKYAPQYTLEQLSDQAFLRQELKKFG-----VEALPH 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
L LQL LFEET E++LWNPTYI +YP E+SPLAR S+ + +ITER+ELFI G EIA
Sbjct: 370 LGLGALQLALFEETAESQLWNPTYIIDYPVEVSPLARASD-SDPSITERYELFITGREIA 428
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RF Q+ K E + + YYD D+I ALEYGMPP GCGIG+DRL+
Sbjct: 429 NGFSELNDAEDQAARFHAQVAAK-EAGDDEAMYYDGDFIRALEYGMPPTGGCGIGIDRLV 487
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S +IRDVILFPH+R E+
Sbjct: 488 MLLTDSPSIRDVILFPHMRPEH 509
>sp|Q7VZ37|SYK_BORPE Lysine--tRNA ligase OS=Bordetella pertussis (strain Tohama I / ATCC
BAA-589 / NCTC 13251) GN=lysS PE=3 SV=1
Length = 506
Score = 556 bits (1434), Expect = e-157, Method: Compositional matrix adjust.
Identities = 253/442 (57%), Positives = 327/442 (73%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF LQD SG +IQ+Y+ +G+ Y FK +DIGDII +G +FK
Sbjct: 73 MLKRVMGKASFATLQDGSG-----RIQIYLERGTLGEEAYAAFKQWDIGDIIAIEGPVFK 127
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS+ +S +L++KSLRPLP+KF +++QE++YR RY+DLI+ + TR+ F+ R++
Sbjct: 128 TNKGELSVHANSARLLSKSLRPLPDKFHGVADQELRYRQRYVDLIMTDATRRTFEARSKA 187
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+ IR M F+EVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 188 VGGIRQAMLNAGFLEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPELYLKRLIVG 247
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAY +Y WLM FTE +I++ + G+
Sbjct: 248 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYADYRWLMDFTEDLIRQAAIAATGSAV 307
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQ R LD S+ F++LTI EAI KY Y + L + F+++EL+K+ + L
Sbjct: 308 LSYQDRELDLSQPFDRLTICEAILKYAEGYTQAQLDDPAFVRAELRKLGANV-EGPPLAR 366
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E KLW PTYI +YP E+SPLAR S+ + ITERFELFI G EIA
Sbjct: 367 AGLGALQLALFEETAEAKLWRPTYIIDYPVEVSPLARASDT-RDGITERFELFITGREIA 425
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF+ Q++ K+ E + Y+D DYI ALEYGMPP GCGIG+DRL+
Sbjct: 426 NGFSELNDPEDQAERFRAQVEAKD-AGDEEAMYFDADYIRALEYGMPPTGGCGIGIDRLV 484
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S +IRDVILFPHLR E+
Sbjct: 485 MLLTDSPSIRDVILFPHLRRED 506
>sp|Q7WK46|SYK_BORBR Lysine--tRNA ligase OS=Bordetella bronchiseptica (strain ATCC
BAA-588 / NCTC 13252 / RB50) GN=lysS PE=3 SV=1
Length = 506
Score = 556 bits (1432), Expect = e-157, Method: Compositional matrix adjust.
Identities = 253/442 (57%), Positives = 327/442 (73%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF LQD SG +IQ+Y+ +G+ Y FK +DIGDII +G +FK
Sbjct: 73 MLKRVMGKASFATLQDGSG-----RIQIYLERGTLGEEAYAAFKQWDIGDIIAIEGPVFK 127
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS+ +S +L++KSLRPLP+KF +++QE++YR RY+DLI+ + TR+ F+ R++
Sbjct: 128 TNKGELSVHANSARLLSKSLRPLPDKFHGVADQELRYRQRYVDLIMTDATRRTFEARSKA 187
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+ IR M F+EVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 188 VGGIRQTMLNAGFLEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPELYLKRLIVG 247
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAY +Y WLM FTE +I++ + G+
Sbjct: 248 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYADYRWLMDFTEDLIRQAAIAATGSAV 307
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQ R LD S+ F++LTI EAI KY Y + L + F+++EL+K+ + L
Sbjct: 308 LSYQDRELDLSQPFDRLTICEAILKYAEGYTQAQLDDPAFVRAELRKLGANV-EGPPLAR 366
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E KLW PTYI +YP E+SPLAR S+ + ITERFELFI G EIA
Sbjct: 367 AGLGALQLALFEETAEAKLWRPTYIIDYPVEVSPLARASDT-RDGITERFELFITGREIA 425
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF+ Q++ K+ E + Y+D DYI ALEYGMPP GCGIG+DRL+
Sbjct: 426 NGFSELNDPEDQAERFRAQVEAKD-AGDEEAMYFDADYIRALEYGMPPTGGCGIGIDRLV 484
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S +IRDVILFPHLR E+
Sbjct: 485 MLLTDSPSIRDVILFPHLRRED 506
>sp|Q7W8T6|SYK_BORPA Lysine--tRNA ligase OS=Bordetella parapertussis (strain 12822 /
ATCC BAA-587 / NCTC 13253) GN=lysS PE=3 SV=1
Length = 506
Score = 554 bits (1427), Expect = e-157, Method: Compositional matrix adjust.
Identities = 252/442 (57%), Positives = 325/442 (73%), Gaps = 8/442 (1%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF LQD SG +IQ+Y+ +G+ Y FK +DIGDII +G +FK
Sbjct: 73 MLKRVMGKASFATLQDGSG-----RIQIYLERGTLGEEAYAAFKQWDIGDIIAIEGPVFK 127
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS+ +S +L++KSLRPLP+KF +++QE++YR RY+DLI+ + TR+ F+ R++
Sbjct: 128 TNKGELSVHANSARLLSKSLRPLPDKFHGVADQELRYRQRYVDLIMTDATRRTFEARSKA 187
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+ IR M F EVETP+LH PGGA AKPF+THHN+L+M+MFLRIAPELYLKRLI+G
Sbjct: 188 VGGIRQAMLNAGFFEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPELYLKRLIVG 247
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAY +Y WLM FTE +I++ + G+
Sbjct: 248 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYADYRWLMDFTEDLIRQAAIAATGSAV 307
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQ R LD S+ F+ LTI EAI KY Y + L + F+++EL+K+ + L
Sbjct: 308 LSYQDRELDLSQPFDHLTICEAILKYAEGYTQAQLDDPAFVRAELRKLGANV-EGPPLAR 366
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEET E +LW PTYI +YP E+SPLAR S+ + ITERFELFI G EIA
Sbjct: 367 AGLGALQLALFEETAEARLWRPTYIIDYPVEVSPLARASDT-RDGITERFELFITGREIA 425
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF+ Q++ K+ E + Y+D DYI ALEYGMPP GCGIG+DRL+
Sbjct: 426 NGFSELNDPEDQAERFRAQVEAKD-AGDEEAMYFDADYIRALEYGMPPTGGCGIGIDRLV 484
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S +IRDVILFPHLR E+
Sbjct: 485 MLLTDSPSIRDVILFPHLRRED 506
>sp|C1DB68|SYK_LARHH Lysine--tRNA ligase OS=Laribacter hongkongensis (strain HLHK9)
GN=lysS PE=3 SV=1
Length = 503
Score = 553 bits (1424), Expect = e-156, Method: Compositional matrix adjust.
Identities = 250/441 (56%), Positives = 338/441 (76%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD+SG +IQ YIS + +G+++Y DFK +D+GDI+GAKGTL K
Sbjct: 75 MLKRVMGKASFATVQDSSG-----RIQFYISRDKVGEDVYADFKTWDMGDILGAKGTLMK 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS++VS L+L++KSLRPLP+KF L++QE KYR RY+DLIIN+++R F KR++I
Sbjct: 130 TKTGELSVEVSELRLLSKSLRPLPDKFHGLADQEQKYRQRYVDLIINQDSRDTFIKRSKI 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+ ++R M D++EVETP++H PGGA AKPF+THHN+L+M ++LRIAPELYLKRL++G
Sbjct: 190 VQTVREVMVGEDYLEVETPMMHPIPGGAAAKPFVTHHNALDMPLYLRIAPELYLKRLVVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN+NFRNEG+S RHNPEFTMIEFY AY Y +M+ TEK+I++ GTTK
Sbjct: 250 GLERVFEINRNFRNEGMSTRHNPEFTMIEFYEAYCGYERMMEMTEKIIRRCAEAACGTTK 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ Y G+ +D K F++ TI+ AIK Y PQY + L ++ +LKSE+K + K + +
Sbjct: 310 VTYNGKEVDLGKPFDRFTIVGAIKHYNPQYTDEQLADEAWLKSEIKALGGKLPPAPGIGS 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEE E KLWNPT+I +YP E+SPLAR S+ + +ITERFELFI+G E A
Sbjct: 370 -----LQLALFEECAEGKLWNPTFIIDYPVEVSPLARGSDA-DPSITERFELFIVGREHA 423
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RF++Q++ K+ + E + +YD DYI A+EYG+PP GCGIG+DRL+
Sbjct: 424 NGYSELNDPEDQAARFRSQVEQKDAGDDE-AMHYDADYIRAMEYGLPPTGGCGIGIDRLV 482
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT++ +IRDVILFPH+R E
Sbjct: 483 MLLTDAPSIRDVILFPHMRPE 503
>sp|Q5NY31|SYK_AROAE Lysine--tRNA ligase OS=Aromatoleum aromaticum (strain EbN1) GN=lysS
PE=3 SV=1
Length = 502
Score = 552 bits (1422), Expect = e-156, Method: Compositional matrix adjust.
Identities = 255/441 (57%), Positives = 336/441 (76%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF+ +QD SG +IQLY++ + +G+++Y DFK++DIGDI+GA GTLFK
Sbjct: 74 MLKRVMGKASFMTIQDLSG-----QIQLYVTRDAVGEDVYADFKHWDIGDIVGAVGTLFK 128
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+K + ++L+TKSLRPLP+KF L++ E KYR R++DLI+NE TR F R+++
Sbjct: 129 TRTGELSVKCTDIRLLTKSLRPLPDKFHGLTDVEQKYRQRHLDLIMNEQTRFTFVARSRM 188
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+ SIR++M + F+EVETP++H PGGA AKPF THHN+L+M++FLRIAPELYLKRL++G
Sbjct: 189 VQSIRNYMVSHGFLEVETPMMHPIPGGAAAKPFTTHHNALDMELFLRIAPELYLKRLVVG 248
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF K+FE+N+NFRNEG+SPRHNPEFTM+EFY AY NY LM FTE ++++ + +GT
Sbjct: 249 GFEKVFEVNRNFRNEGLSPRHNPEFTMMEFYEAYANYKSLMNFTEGLLRQAAREALGTEV 308
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
YQGR LD SK F +LTI+EAI ++ P ++ L ++ +L+++L + K L
Sbjct: 309 FVYQGRELDLSKPFARLTIVEAIHQFHPGFSIAQLNDEAWLRAKLTDLKAKLRDDAGLGT 368
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQLMLFEETTE +LW PT+I +YP E+SPLAR+ N N ITERFELFI+G EIA
Sbjct: 369 -----LQLMLFEETTEAELWEPTFIIDYPAEVSPLARR-NDANPEITERFELFIVGREIA 422
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF Q+ K E E + +YD DYI ALEYG+PP GCGIG+DRL+
Sbjct: 423 NGFSELNDPEDQAARFLEQVKAK-EAGDEEAMFYDADYIRALEYGLPPTGGCGIGIDRLV 481
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S +IRDVILFP +R E
Sbjct: 482 MLLTDSPSIRDVILFPQMRTE 502
>sp|A4SYX2|SYK_POLSQ Lysine--tRNA ligase OS=Polynucleobacter necessarius subsp.
asymbioticus (strain DSM 18221 / CIP 109841 /
QLW-P1DMWA-1) GN=lysS PE=3 SV=1
Length = 514
Score = 546 bits (1408), Expect = e-155, Method: Compositional matrix adjust.
Identities = 266/447 (59%), Positives = 331/447 (74%), Gaps = 16/447 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
+LKRVMGK SF +QD SG +IQ YI++EI G + + FK++D+GD I A+G LFK
Sbjct: 76 VLKRVMGKASFATIQDRSG-----QIQFYINDEISGADTHGAFKHWDMGDFISAEGNLFK 130
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++ S+L+L++KSLRPLP+KF LS+ E KYR RY+DLI+N +R FK R+
Sbjct: 131 TNKGELSVECSNLRLLSKSLRPLPDKFHGLSDLETKYRQRYVDLIVNPESRNTFKARSNA 190
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+S+R M DFMEVETP+LH PGGA AKPFITHHN+L+M+MFLRIAPELYLKRL++G
Sbjct: 191 IASLRRHMLDADFMEVETPMLHPIPGGATAKPFITHHNALDMQMFLRIAPELYLKRLVVG 250
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE +I+ +D GT
Sbjct: 251 GFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTEGLIRAAAVDAQGTAV 310
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQ----YNEIDLQNKLFLKSELKKI--NPKFNQ 294
+ +QGR LD SK F++LTI EAI KY Q Y I L + F+++ELKK NP
Sbjct: 311 LTHQGRELDLSKPFQRLTINEAILKYCAQSGKSYEAIQLDDADFIRAELKKGGENP---D 367
Query: 295 KKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFI 354
L N LQL LFE E+ LW PTYI +YP E+SPLAR+S+ ITERFELFI
Sbjct: 368 SPTLKNAGIGALQLALFELVAESHLWEPTYIIDYPIEVSPLARESDT-RPGITERFELFI 426
Query: 355 IGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGI 414
G EIANGFSELND E+Q+ RF+ Q++ K E E + Y+D D+I ALEYGMPP GCGI
Sbjct: 427 TGREIANGFSELNDAEDQANRFRKQVEQK-EAGDEEAMYFDHDFIRALEYGMPPTGGCGI 485
Query: 415 GVDRLIMLLTNSKNIRDVILFPHLRNE 441
G+DRL+MLLT++ NIRDVILFPHLR E
Sbjct: 486 GIDRLVMLLTDAPNIRDVILFPHLRRE 512
>sp|B1XTS4|SYK_POLNS Lysine--tRNA ligase OS=Polynucleobacter necessarius subsp.
necessarius (strain STIR1) GN=lysS PE=3 SV=1
Length = 514
Score = 541 bits (1394), Expect = e-153, Method: Compositional matrix adjust.
Identities = 264/447 (59%), Positives = 328/447 (73%), Gaps = 16/447 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
+LKRVMGK SF +QD SG +IQ YI++E+ G +++ FK++D+GD I +G LFK
Sbjct: 76 VLKRVMGKTSFATIQDRSG-----QIQFYINDELSGADVHGAFKHWDMGDFISTEGNLFK 130
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GELS++ S+L+L++KSLRPLP+KF LS+ E KYR RY+DLI+N +R FK R+
Sbjct: 131 TNKGELSVECSNLRLLSKSLRPLPDKFHGLSDLETKYRQRYVDLIVNPESRSTFKARSNA 190
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I+S+R M DFMEVETP+LH PGGA AKPFITHHN+L+M+MFLRIAPELYLKRL++G
Sbjct: 191 IASLRRHMLDADFMEVETPMLHPIPGGAAAKPFITHHNALDMQMFLRIAPELYLKRLVVG 250
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN NFRNEG+SPRHNPEFTM+EFYAAYT+Y WLM FTE +I+ +D GT
Sbjct: 251 GFERVFEINHNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTEGLIRAAAIDAQGTAV 310
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQ----YNEIDLQNKLFLKSELKKI--NPKFNQ 294
+ +QGR LD SK F++LTI EAI KY Q Y L++ F++ ELKK NP
Sbjct: 311 LTHQGRELDLSKPFQRLTITEAILKYCGQSGKSYEAAQLEDANFIRVELKKGGENP---D 367
Query: 295 KKILNNLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFI 354
L N LQL LFE E LW PTYI +YP E+SPLAR+S+ ITERFELFI
Sbjct: 368 APTLKNAGIGALQLALFELVAEEHLWEPTYIIDYPIEVSPLARESDT-RPGITERFELFI 426
Query: 355 IGNEIANGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGI 414
G EIANGFSELND E+Q+ RF+ Q++ K E E + Y+D D+I ALEYGMPP GCGI
Sbjct: 427 TGREIANGFSELNDAEDQANRFRKQVEQK-EAGDEEAMYFDHDFIRALEYGMPPTGGCGI 485
Query: 415 GVDRLIMLLTNSKNIRDVILFPHLRNE 441
G+DRLIMLLT++ NIRDVILFPHLR E
Sbjct: 486 GIDRLIMLLTDAPNIRDVILFPHLRRE 512
>sp|A1K5J9|SYK_AZOSB Lysine--tRNA ligase OS=Azoarcus sp. (strain BH72) GN=lysS PE=3 SV=1
Length = 500
Score = 541 bits (1393), Expect = e-153, Method: Compositional matrix adjust.
Identities = 249/441 (56%), Positives = 329/441 (74%), Gaps = 13/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SFI +QD SG +IQLY+ + +G+++Y DFK++DIGDI+G GTLFK
Sbjct: 73 MLKRVMGKASFITIQDLSG-----RIQLYVQRDGVGEDVYADFKHWDIGDIVGCVGTLFK 127
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGEL++K S ++L+TKSLRPLP+KF L++ E KYR RY+DLI++E TR F R+++
Sbjct: 128 TKTGELTVKASEIRLLTKSLRPLPDKFHGLTDVEQKYRQRYLDLIMSEQTRFTFVARSRM 187
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+ SIR++M + F+EVETP++H PGGA AKPF+THHN+L+M++FLRIAPELYLKRL++G
Sbjct: 188 VQSIRNYMINHGFLEVETPMMHPIPGGAAAKPFVTHHNALDMELFLRIAPELYLKRLVVG 247
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G K+FE+N+NFRNEG+SPRHNPEFTM+EFY AY +Y LM FTE +I++ + +G
Sbjct: 248 GLEKVFEVNRNFRNEGLSPRHNPEFTMMEFYEAYADYRSLMNFTEGLIRQAAREALGAES 307
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
YQGR LD SK F +LTI++AI+KY P ++E L + ++K +++ K + +
Sbjct: 308 FVYQGRELDLSKPFHRLTIVQAIRKYHPGFSEAQLADAEWVKEKIQAFGEKVKPGGLGS- 366
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E +LW PT+I +YP E+SPLAR S+ N ITERFELFI+G EIA
Sbjct: 367 -----LQLQLFEACAEAELWEPTFIIDYPVEVSPLARASD-SNPEITERFELFIVGREIA 420
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF Q K E E + YYD DYI ALE+G+PP GCGIG+DRL+
Sbjct: 421 NGFSELNDPEDQAARFLAQAQAK-EAGDEEAMYYDADYIRALEFGLPPTGGCGIGIDRLV 479
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S +IRDVILFP +R E
Sbjct: 480 MLLTDSASIRDVILFPQMRPE 500
>sp|Q47C53|SYK_DECAR Lysine--tRNA ligase OS=Dechloromonas aromatica (strain RCB) GN=lysS
PE=3 SV=1
Length = 501
Score = 535 bits (1377), Expect = e-151, Method: Compositional matrix adjust.
Identities = 248/441 (56%), Positives = 326/441 (73%), Gaps = 13/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD SG +IQ+YI+ + +G+ +Y DFK +D+GDIIG G+L K
Sbjct: 74 MLKRVMGKASFATIQDLSG-----RIQIYITRDRVGEEVYADFKTWDLGDIIGVTGSLMK 128
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELSI+ + ++L+TKSLRPLP+KF L++QE+KYR RY+DLI+NE TR F+ R+ I
Sbjct: 129 TKTGELSIQAAEIRLLTKSLRPLPDKFHGLADQEMKYRQRYVDLIMNEETRFTFRARSAI 188
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
++SIR++M + FMEVETP++H PGGA AKPF+THHN+L+M+ FLRIAPELYLKRL++G
Sbjct: 189 VASIRNYMTGHGFMEVETPMMHPIPGGASAKPFVTHHNALDMQQFLRIAPELYLKRLVVG 248
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF K+FEIN+NFRNEG+SPRHNPEFTM+EFY AY NY LM FTE +++ + +G
Sbjct: 249 GFEKVFEINRNFRNEGLSPRHNPEFTMMEFYEAYANYHTLMDFTEGLLRHAAREALGKEV 308
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
YQGR LD SK F +LTI +AI++ P++++ +L + FLK+++K + +
Sbjct: 309 FVYQGRELDLSKPFHRLTINQAIQRQHPEFSDAELADPEFLKAKIKHFGEPLKPGGLGS- 367
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E W PT+I +YP E+SPLAR S+ N ITERFELFI+G EIA
Sbjct: 368 -----LQLQLFEACAEAHCWEPTFIIDYPVEVSPLARASDT-NPEITERFELFIVGREIA 421
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RF+ Q+ K+ E + YYD D+I ALEYG+PP GCGIG+DRLI
Sbjct: 422 NGFSELNDAEDQAARFQEQMKAKD-AGDEEAMYYDADFIRALEYGLPPTGGCGIGIDRLI 480
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT++ IRDVILFP +R E
Sbjct: 481 MLLTDAAAIRDVILFPSMRPE 501
>sp|Q3SKD9|SYK_THIDA Lysine--tRNA ligase OS=Thiobacillus denitrificans (strain ATCC
25259) GN=lysS PE=3 SV=1
Length = 501
Score = 526 bits (1354), Expect = e-148, Method: Compositional matrix adjust.
Identities = 241/441 (54%), Positives = 323/441 (73%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF LQD SG +IQ+Y+SN++ G + + FK +D+GD +G GTLFK
Sbjct: 72 MLKRVMGKASFATLQDMSG-----RIQVYVSNDLTGLDAHEAFKRWDLGDFVGVSGTLFK 126
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GEL+I+ S++L++K+LRPLP KF L++QE KYR RY+DLI N++ R F +R++I
Sbjct: 127 TNKGELTIQAKSVRLLSKALRPLPEKFHGLADQEQKYRQRYLDLITNDDARSTFVRRSKI 186
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I +IR FM + F+EVETP++H PGGA AKPF+THHN+L+M++FLRIAPELYLKRL++G
Sbjct: 187 IQAIREFMTGHGFLEVETPMMHPIPGGAAAKPFVTHHNALDMELFLRIAPELYLKRLVVG 246
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF K+FEIN+NFRNEG+S RHNPEFTM+EFY AY Y +LM FTE +I+ + G+T
Sbjct: 247 GFEKVFEINRNFRNEGLSTRHNPEFTMMEFYEAYREYRYLMDFTEALIRHTAVAATGSTT 306
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQG ++ F++LTI+EA++KY P+Y L ++ +L ++ + K+ + L
Sbjct: 307 ISYQGSTIELGTPFDRLTIVEAVRKYHPEYTVEQLNDRDWLTAQFTAMKAKYREHDGLGG 366
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL FEETTE L PT+I +YP E+SPLAR+S+ + ITERFELFI G E+A
Sbjct: 367 -----LQLTFFEETTEALLVQPTFIVDYPAEVSPLARRSDTQ-PEITERFELFITGREMA 420
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RF Q+ K E E + +YD D+I ALE+G+PP GCGIG+DRL+
Sbjct: 421 NGFSELNDAEDQAERFMEQVRAK-EAGDEEAMHYDADFIRALEHGLPPTGGCGIGIDRLV 479
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S +IRDVILFP +R E
Sbjct: 480 MLLTDSPSIRDVILFPQMRRE 500
>sp|Q7NZ62|SYK_CHRVO Lysine--tRNA ligase OS=Chromobacterium violaceum (strain ATCC 12472
/ DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC
9757) GN=lysS PE=3 SV=1
Length = 502
Score = 525 bits (1353), Expect = e-148, Method: Compositional matrix adjust.
Identities = 233/441 (52%), Positives = 329/441 (74%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF LQD SG +IQ +IS + +G+++Y DFK +D+GDI+ KG LFK
Sbjct: 74 MLKRVMGKASFATLQDVSG-----RIQAFISRDNVGEDVYADFKRWDLGDIVAVKGMLFK 128
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGEL+++ + +++++K++RPLP KF +++QE KYR RY DLI++E +R+ F KR++I
Sbjct: 129 TKTGELTVQATEVRMLSKNIRPLPEKFHGIADQETKYRQRYADLIMSEESRETFIKRSKI 188
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+ +R M ++EVETP++H PGGA AKPF+THHN+L+M ++LRIAPELYLKRL++G
Sbjct: 189 VQKVRDVMVGEGYLEVETPMMHPIPGGASAKPFVTHHNALDMPLYLRIAPELYLKRLVVG 248
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN+NFRNEG+S RHNPEFTMIEFY AY++Y +M+ TE +I++ + G+T
Sbjct: 249 GLERVFEINRNFRNEGMSTRHNPEFTMIEFYEAYSDYQRMMEMTETIIRECALVACGSTT 308
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQG+ +D K F++ TI++AIK Y PQY + L + ++ SE+K++ K L +
Sbjct: 309 VTYQGKEVDLGKPFDRFTIVQAIKHYNPQYTDAQLSDAAWVASEIKRLGGKLPPAPGLGS 368
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFEE E+ LWNPT+I +YP E+SPLAR S+ + +TERFELFI+G E A
Sbjct: 369 -----LQLALFEECAESLLWNPTFIIDYPVEVSPLARGSDTQ-PGLTERFELFIVGREHA 422
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RF+ Q+ K+ + E + +YD DYI A+EYG+PP GCGIG+DRL+
Sbjct: 423 NGYSELNDPEDQAARFQAQVAQKDAGDDE-AMHYDADYIRAMEYGLPPTGGCGIGIDRLV 481
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT++ +IRDVILFPH+R E
Sbjct: 482 MLLTDAPSIRDVILFPHMRPE 502
>sp|C5CSG3|SYK_VARPS Lysine--tRNA ligase OS=Variovorax paradoxus (strain S110) GN=lysS
PE=3 SV=1
Length = 520
Score = 522 bits (1344), Expect = e-147, Method: Compositional matrix adjust.
Identities = 249/442 (56%), Positives = 326/442 (73%), Gaps = 10/442 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK SF +QD + +IQLY++ + IG+ Y +FK +D+GDI+GA+GTL K
Sbjct: 89 MLKRVMGKASFATVQD-----ATSRIQLYVTRDAIGEEAYAEFKRWDLGDIVGAEGTLMK 143
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+KV+ L+L+TKSLRPLP+KF +++QE KYR RY+DLI +E R F R++
Sbjct: 144 TKTGELSVKVTKLRLLTKSLRPLPDKFHGMADQEQKYRQRYVDLITDETARVRFTARSKA 203
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+S++R FM + F+EVETP+LH PGGA AKPF THHN+L+ +MFLRIAPELYLKRLI+G
Sbjct: 204 VSALREFMVGHGFLEVETPMLHPIPGGANAKPFKTHHNALDQEMFLRIAPELYLKRLIVG 263
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+++RNEGIS RHNPEFTM+EFYAAY NY LM FTE +I+ I +GT +
Sbjct: 264 GFERVFEINRSYRNEGISVRHNPEFTMMEFYAAYWNYRDLMDFTETLIRTIADKAVGTQQ 323
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ YQG+ +D ++ FE+LTI EAI KYT +D + +L + L+KI +K L+
Sbjct: 324 LTYQGKPVDLTQPFERLTIREAILKYTEAGTGVD--DSAWLINALRKIGLS-EEKDKLSQ 380
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQ+M FEET E KLW PT+I +PTEISPLAR +N E +TERFEL+I G E
Sbjct: 381 RSLASLQVMYFEETVEEKLWQPTFIMEHPTEISPLAR-ANDERPEVTERFELYITGREFG 439
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELND E+Q+ RF Q+ K+ + E + +YD D++ ALEYGMPP GCGIG+DRL+
Sbjct: 440 NGFSELNDAEDQAARFNAQVAAKDSGDDE-AMFYDHDFVRALEYGMPPTGGCGIGIDRLM 498
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S +IRDVILFP LR E+
Sbjct: 499 MLLTDSPSIRDVILFPALRRES 520
>sp|Q82SH1|SYK_NITEU Lysine--tRNA ligase OS=Nitrosomonas europaea (strain ATCC 19718 /
NBRC 14298) GN=lysS PE=3 SV=1
Length = 502
Score = 517 bits (1331), Expect = e-146, Method: Compositional matrix adjust.
Identities = 246/443 (55%), Positives = 326/443 (73%), Gaps = 14/443 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
+ KRVMGK SF +QD SG +IQLYISN+ G+ + F++YD+GDI+GA+G LFK
Sbjct: 73 LFKRVMGKASFATIQDMSG-----RIQLYISNDHTGETAHEAFRHYDLGDILGAEGVLFK 127
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T T ELS++V+ L L+TKSLRPLP KF L++QE KYR RY+DLI NE+TR+VF R++I
Sbjct: 128 TRTDELSLRVTQLHLLTKSLRPLPEKFHGLADQEQKYRRRYLDLITNEDTRRVFAIRSKI 187
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I +IR F+ D++EVETP++H+ PGGA A+PF+THHN+L+M ++LRIAPELYLKRL++G
Sbjct: 188 IQAIREFLVDRDYLEVETPMMHSIPGGATARPFVTHHNALDMSLYLRIAPELYLKRLVVG 247
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G K+FEIN+NFRNEGIS RHNPEFTM+EFY AY ++ +LM TE M++++ + GTT+
Sbjct: 248 GMEKVFEINRNFRNEGISTRHNPEFTMLEFYEAYQDHNYLMDLTESMLREVALKVSGTTR 307
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I YQ R +D ++ F +LTI +AI KY P+Y++ L ++ FL L+ N +
Sbjct: 308 IVYQQREMDLAQPFARLTIAQAILKYHPEYSDAQLNDRDFLTKALQAKGVTVNPDSGIGG 367
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LF+ETTE L+ P +I +YP E+SPLAR N N IT+RFEL+I G EIA
Sbjct: 368 -----LQLALFDETTEHLLFEPVFIVDYPAEVSPLAR-CNDANPEITDRFELYIAGREIA 421
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSS-YYDTDYIHALEYGMPPASGCGIGVDRL 419
NGFSELNDPE+Q+ RF Q K G+L + +YD DYI ALEYG+PP +G GIG+DRL
Sbjct: 422 NGFSELNDPEDQANRFLEQARAKEA--GDLEAMHYDADYIQALEYGLPPTAGEGIGIDRL 479
Query: 420 IMLLTNSKNIRDVILFPHLRNEN 442
+MLLT+S +IRDVILFP LR E+
Sbjct: 480 VMLLTDSPSIRDVILFPQLRKED 502
>sp|Q9JTT7|SYK_NEIMA Lysine--tRNA ligase OS=Neisseria meningitidis serogroup A /
serotype 4A (strain Z2491) GN=lysS PE=3 SV=1
Length = 503
Score = 511 bits (1317), Expect = e-144, Method: Compositional matrix adjust.
Identities = 238/441 (53%), Positives = 325/441 (73%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR MGK SF +QD SG +IQLY++N+ + + + DF ++D+GDI+GA+GTLFK
Sbjct: 75 MLKRQMGKASFATIQDVSG-----QIQLYLNNKGVSQEVLDDFNHWDLGDIVGAEGTLFK 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GEL+++VS ++L++KSLRPLP+K + LS+QE KYR RY+DLI NE +R F KR+QI
Sbjct: 130 TNHGELTVRVSGIRLLSKSLRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQI 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I S+R+FM ++EVETP++H PGGA AKPF+THHN+L++ ++LRIAPELYLKRL++G
Sbjct: 190 IQSVRNFMVGEHYLEVETPMMHPIPGGATAKPFVTHHNALDIPLYLRIAPELYLKRLVVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN++FRNEG+S RHNPEFTMIEFY A+++Y +M+ E +I+ GT
Sbjct: 250 GLERVFEINRSFRNEGMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASHTVNGTAN 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I Y G+ +D FE+LTI+EAIKKY P Y + L + +LK E+ K + +
Sbjct: 310 ITYNGKEVDLESPFERLTILEAIKKYNPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGS 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E KLWNPT+I +YP E+SPLAR S+ + +TERFELF++G E+A
Sbjct: 370 -----LQLALFEGCAEGKLWNPTFIVDYPVEVSPLARASDTK-QGLTERFELFVVGRELA 423
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RFK Q+ K+ + E + +YD DYI A+E+G+PP GCGIG+DRL+
Sbjct: 424 NGYSELNDPEDQAERFKAQVAQKDAGDDE-AMHYDADYIRAMEFGLPPTGGCGIGIDRLV 482
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S+ IRDVILFP +R E
Sbjct: 483 MLLTDSQTIRDVILFPQMRPE 503
>sp|Q9JYU6|SYK_NEIMB Lysine--tRNA ligase OS=Neisseria meningitidis serogroup B (strain
MC58) GN=lysS PE=3 SV=1
Length = 503
Score = 511 bits (1315), Expect = e-144, Method: Compositional matrix adjust.
Identities = 238/441 (53%), Positives = 325/441 (73%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR MGK SF +QD SG +IQLY++N+ + + + DF ++D+GDI+GA+GTLFK
Sbjct: 75 MLKRQMGKASFATIQDVSG-----QIQLYLNNKGVSQEVLDDFNHWDLGDIVGAEGTLFK 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GEL+++VS ++L++KSLRPLP+K + LS+QE KYR RY+DLI NE +R F KR+QI
Sbjct: 130 TNHGELTVRVSGIRLLSKSLRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQI 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I S+R+FM ++EVETP++H PGGA AKPF+THHN+L++ ++LRIAPELYLKRL++G
Sbjct: 190 IQSVRNFMVGEHYLEVETPMMHPIPGGATAKPFVTHHNALDIPLYLRIAPELYLKRLVVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN++FRNEG+S RHNPEFTMIEFY A+++Y +M+ E +I+ GT
Sbjct: 250 GLERVFEINRSFRNEGMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTAN 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I Y G+ +D FE+LTI+EAIKKY P Y + L + +LK E+ K + +
Sbjct: 310 ITYNGKEVDLESPFERLTILEAIKKYNPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGS 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E KLWNPT+I +YP E+SPLAR S+ + +TERFELF++G E+A
Sbjct: 370 -----LQLALFEGCAEGKLWNPTFIVDYPVEVSPLARASDTK-QGLTERFELFVVGRELA 423
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RFK Q+ K+ + E + +YD DYI A+E+G+PP GCGIG+DRL+
Sbjct: 424 NGYSELNDPEDQAERFKAQVVQKDAGDDE-AMHYDADYIRAMEFGLPPTGGCGIGIDRLV 482
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S+ IRDVILFP +R E
Sbjct: 483 MLLTDSQTIRDVILFPQMRPE 503
>sp|A1KUN1|SYK_NEIMF Lysine--tRNA ligase OS=Neisseria meningitidis serogroup C /
serotype 2a (strain ATCC 700532 / FAM18) GN=lysS PE=3
SV=1
Length = 503
Score = 511 bits (1315), Expect = e-144, Method: Compositional matrix adjust.
Identities = 238/441 (53%), Positives = 325/441 (73%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR MGK SF +QD SG +IQLY++N+ + + + DF ++D+GDI+GA+GTLFK
Sbjct: 75 MLKRQMGKASFATIQDVSG-----QIQLYLNNKGVSQEVLDDFNHWDLGDIVGAEGTLFK 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GEL+++VS ++L++KSLRPLP+K + LS+QE KYR RY+DLI NE +R F KR+QI
Sbjct: 130 TNHGELTVRVSDIRLLSKSLRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQI 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I S+R+FM ++EVETP++H PGGA AKPF+THHN+L++ ++LRIAPELYLKRL++G
Sbjct: 190 IQSVRNFMVGEHYLEVETPMMHPIPGGATAKPFVTHHNALDIPLYLRIAPELYLKRLVVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN++FRNEG+S RHNPEFTMIEFY A+++Y +M+ E +I+ GT
Sbjct: 250 GLERVFEINRSFRNEGMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTAN 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I Y G+ +D FE+LTI+EAIKKY P Y + L + +LK E+ K + +
Sbjct: 310 ITYNGKEVDLESPFERLTILEAIKKYNPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGS 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E KLWNPT+I +YP E+SPLAR S+ + +TERFELF++G E+A
Sbjct: 370 -----LQLALFEGCAEGKLWNPTFIIDYPVEVSPLARASDTK-QGLTERFELFVVGRELA 423
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RFK Q+ K+ + E + +YD DYI A+E+G+PP GCGIG+DRL+
Sbjct: 424 NGYSELNDPEDQAERFKAQVAQKDAGDDE-AMHYDADYIRAMEFGLPPTGGCGIGIDRLV 482
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+S+ IRDVILFP +R E
Sbjct: 483 MLLTDSQTIRDVILFPQMRPE 503
>sp|Q5F6U2|SYK_NEIG1 Lysine--tRNA ligase OS=Neisseria gonorrhoeae (strain ATCC 700825 /
FA 1090) GN=lysS PE=3 SV=1
Length = 503
Score = 508 bits (1309), Expect = e-143, Method: Compositional matrix adjust.
Identities = 236/441 (53%), Positives = 325/441 (73%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR MGK SF +QD +G +IQLY++N+ + + + DF ++D+GDI+GA+GTLFK
Sbjct: 75 MLKRQMGKASFATIQDVTG-----QIQLYLNNKGVSQEVLDDFNHWDLGDIVGAEGTLFK 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GEL+++VS ++L++KSLRPLP+K + LS+QE KYR RY+DLI NE +R F KR+QI
Sbjct: 130 TNHGELTVRVSDIRLLSKSLRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQI 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I S+R+FM ++EVETP++H PGGA AKPF+THHN+L++ ++LRIAPELYLKRL++G
Sbjct: 190 IQSVRNFMVGEHYLEVETPMMHPIPGGATAKPFVTHHNALDIPLYLRIAPELYLKRLVVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN++FRNEG+S RHNPEFTMIEFY A+++Y +M+ E +I+ GT
Sbjct: 250 GLERVFEINRSFRNEGMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTAN 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I Y G+ +D FE+LTI+EAIKKY P Y + L + +LK E+ K + +
Sbjct: 310 ITYNGKEVDLESPFERLTILEAIKKYNPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGS 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E KLWNPT+I +YP E+SPLAR S+ + +TERFELF++G E+A
Sbjct: 370 -----LQLALFEGCAEGKLWNPTFIVDYPVEVSPLARASDTK-QGLTERFELFVVGRELA 423
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RFK+Q+ K+ + E + +YD DYI A+E+G+PP GCGIG+DRL+
Sbjct: 424 NGYSELNDPEDQAERFKSQVAQKDAGDDE-AMHYDADYIRAMEFGLPPTGGCGIGIDRLV 482
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+ + IRDVILFP +R E
Sbjct: 483 MLLTDLQTIRDVILFPQMRPE 503
>sp|B4RP57|SYK_NEIG2 Lysine--tRNA ligase OS=Neisseria gonorrhoeae (strain NCCP11945)
GN=lysS PE=3 SV=1
Length = 503
Score = 506 bits (1302), Expect = e-142, Method: Compositional matrix adjust.
Identities = 235/441 (53%), Positives = 324/441 (73%), Gaps = 12/441 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKR MGK SF +QD +G +IQLY++N+ + + + F ++D+GDI+GA+GTLFK
Sbjct: 75 MLKRQMGKASFATIQDVTG-----QIQLYLNNKGVSQEVLDGFNHWDLGDIVGAEGTLFK 129
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
TN GEL+++VS ++L++KSLRPLP+K + LS+QE KYR RY+DLI NE +R F KR+QI
Sbjct: 130 TNHGELTVRVSDIRLLSKSLRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQI 189
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
I S+R+FM ++EVETP++H PGGA AKPF+THHN+L++ ++LRIAPELYLKRL++G
Sbjct: 190 IQSVRNFMVGEHYLEVETPMMHPIPGGATAKPFVTHHNALDIPLYLRIAPELYLKRLVVG 249
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
G ++FEIN++FRNEG+S RHNPEFTMIEFY A+++Y +M+ E +I+ GT
Sbjct: 250 GLERVFEINRSFRNEGMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTAN 309
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
I Y G+ +D FE+LTI+EAIKKY P Y + L + +LK E+ K + +
Sbjct: 310 ITYNGKEVDLESPFERLTILEAIKKYNPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGS 369
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQL LFE E KLWNPT+I +YP E+SPLAR S+ + +TERFELF++G E+A
Sbjct: 370 -----LQLALFEGCAEGKLWNPTFIVDYPVEVSPLARASDTK-QGLTERFELFVVGRELA 423
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NG+SELNDPE+Q+ RFK+Q+ K+ + E + +YD DYI A+E+G+PP GCGIG+DRL+
Sbjct: 424 NGYSELNDPEDQAERFKSQVAQKDAGDDE-AMHYDADYIRAMEFGLPPTGGCGIGIDRLV 482
Query: 421 MLLTNSKNIRDVILFPHLRNE 441
MLLT+ + IRDVILFP +R E
Sbjct: 483 MLLTDLQTIRDVILFPQMRPE 503
>sp|A2SDC3|SYK_METPP Lysine--tRNA ligase OS=Methylibium petroleiphilum (strain PM1)
GN=lysS PE=3 SV=1
Length = 508
Score = 505 bits (1300), Expect = e-142, Method: Compositional matrix adjust.
Identities = 235/442 (53%), Positives = 318/442 (71%), Gaps = 13/442 (2%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYISNEIIGKNLYTDFKNYDIGDIIGAKGTLFK 60
MLKRVMGK F LQD SG +IQLYI+++ +G FK++D+GDI+GA+GTLFK
Sbjct: 80 MLKRVMGKACFATLQDGSG-----RIQLYITSDAVGPEALAAFKHWDLGDILGAEGTLFK 134
Query: 61 TNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQI 120
T TGELS+KV +++L+TKSLRPLP+KF +++QE+KYR R +DLI++E +R+ F+ R++
Sbjct: 135 TRTGELSLKVGTIRLLTKSLRPLPDKFHGMADQELKYRQREVDLIMDEASRERFRARSKA 194
Query: 121 ISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLIIG 180
+SSIR FM ++ F+EVETP+LH PGGA AKPF+THHN+L+ +MFLRIAPELYLKRL++G
Sbjct: 195 VSSIRQFMVEHGFLEVETPMLHPIPGGANAKPFVTHHNALDQQMFLRIAPELYLKRLVVG 254
Query: 181 GFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTTK 240
GF ++FEIN+NFRNEG+S RHNPEFTM+EFYAAY + LM FTE++++ +GT +
Sbjct: 255 GFERVFEINRNFRNEGVSVRHNPEFTMMEFYAAYWTHHDLMDFTEQILRHAARKAVGTAQ 314
Query: 241 IDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILNN 300
+ Y G+ +D F +L++ +++ + + + + L+++L+ K L
Sbjct: 315 LAYGGQAVDLESPFARLSVRDSLIAHA-GLSAAEAADTTVLRAKLEAHGEKAPAHWSLAE 373
Query: 301 LKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEIA 360
LQ LFE E KLW PT+I +YP E+SPLAR S+ + ITERFELFI G E
Sbjct: 374 -----LQFGLFEAAVEEKLWQPTFIVDYPVEVSPLARASDA-DPTITERFELFITGREFG 427
Query: 361 NGFSELNDPEEQSVRFKNQIDLKNEINGELSSYYDTDYIHALEYGMPPASGCGIGVDRLI 420
NGFSELNDPE+Q+ RF Q K+ E + Y+DTDYI ALE+G+PP GCGIG+DRL+
Sbjct: 428 NGFSELNDPEDQAARFAAQASNKD-AGDEEAMYFDTDYIRALEHGLPPTGGCGIGIDRLM 486
Query: 421 MLLTNSKNIRDVILFPHLRNEN 442
MLLT+S NIRDVILFP LR E
Sbjct: 487 MLLTDSPNIRDVILFPALRREG 508
>sp|Q5WVS0|SYK_LEGPL Lysine--tRNA ligase OS=Legionella pneumophila (strain Lens) GN=lysS
PE=3 SV=1
Length = 496
Score = 503 bits (1295), Expect = e-141, Method: Compositional matrix adjust.
Identities = 239/442 (54%), Positives = 333/442 (75%), Gaps = 17/442 (3%)
Query: 1 MLKRVMGKISFIMLQDTSGPDSNGKIQLYI-SNEIIGKNLYTDFKNYDIGDIIGAKGTLF 59
+L+R+MGK SF +QD SG +IQ+Y+ SN++ ++Y FK++D+GDI+G +G LF
Sbjct: 70 VLRRIMGKASFFHIQDVSG-----RIQVYLRSNDL--PDVYEQFKHWDLGDIVGVQGELF 122
Query: 60 KTNTGELSIKVSSLKLITKSLRPLPNKFQKLSNQEIKYRHRYIDLIINENTRKVFKKRTQ 119
KTNTGEL+I ++L+TKSLRPLP+KF L++QE+KYR RY+DLI NE++RK F R+
Sbjct: 123 KTNTGELTINAEHVELLTKSLRPLPDKFHGLADQELKYRKRYVDLIANEDSRKTFLIRSH 182
Query: 120 IISSIRHFMEKNDFMEVETPILHNKPGGAIAKPFITHHNSLNMKMFLRIAPELYLKRLII 179
+I + R FM+ N F+EVETP++H PGGA+A+PF+THHN+L+M M+LRIAPELYLKRL++
Sbjct: 183 LIKAFREFMDDNHFLEVETPMMHPIPGGALARPFVTHHNTLDMTMYLRIAPELYLKRLVV 242
Query: 180 GGFNKIFEINKNFRNEGISPRHNPEFTMIEFYAAYTNYIWLMKFTEKMIKKIIMDCIGTT 239
GGF +++EIN+NFRNEGIS RHNPEFTM+EFY AY +Y LM FTE++ + + T
Sbjct: 243 GGFERVYEINRNFRNEGISTRHNPEFTMLEFYQAYADYNDLMNFTEQLFHYLCDKVLATR 302
Query: 240 KIDYQGRLLDFSKSFEKLTIIEAIKKYTPQYNEIDLQNKLFLKSELKKINPKFNQKKILN 299
+I+YQG+++DF+K FE+L++ EAI KY P L+ ++ L ++ + + L
Sbjct: 303 QIEYQGQVIDFNKPFERLSVKEAILKYHPDIKAQQLETVEGCRTLLNDLDLPYKETDGLG 362
Query: 300 NLKKDILQLMLFEETTETKLWNPTYITNYPTEISPLARKSNIENNNITERFELFIIGNEI 359
LQ++LFEET E +L+ PT+IT YPTEISPLAR+S+ N +T+RFE FI G EI
Sbjct: 363 K-----LQIILFEETVEHQLFQPTFITEYPTEISPLARRSDT-NPEVTDRFEFFIAGREI 416
Query: 360 ANGFSELNDPEEQSVRFKNQIDLKNEINGELSS-YYDTDYIHALEYGMPPASGCGIGVDR 418
ANGFSELND E+Q+ RF+ Q++ K+ G+L + ++D+DYI ALEYG+PP +G GIG+DR
Sbjct: 417 ANGFSELNDAEDQAERFRKQVEEKD--AGDLEAMHFDSDYIEALEYGLPPTAGEGIGIDR 474
Query: 419 LIMLLTNSKNIRDVILFPHLRN 440
L+ML TNS++IRDVILFPHLR
Sbjct: 475 LVMLFTNSQSIRDVILFPHLRQ 496
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.138 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 164,980,483
Number of Sequences: 539616
Number of extensions: 7169667
Number of successful extensions: 26209
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1562
Number of HSP's successfully gapped in prelim test: 75
Number of HSP's that attempted gapping in prelim test: 20253
Number of HSP's gapped (non-prelim): 2657
length of query: 442
length of database: 191,569,459
effective HSP length: 121
effective length of query: 321
effective length of database: 126,275,923
effective search space: 40534571283
effective search space used: 40534571283
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)