Your job contains 1 sequence.
>psy8868
MSIKLNNKKKTLKINSFERINKINKQIINGHTDVNQLVPFKYNWAWDRYLSSCANHWMPQ
EINMQRDIELWKNPIGLTEEERRLVKRNLGFFSTADSLAANNIVLGTYRHITAPECRQYL
LRQAFEEAIHTHAYQYIVESLGLDELEIFNAYHEIKSIRDKDEFLIPFIDVLTDLKFKTG
NTKNDQKLLKSLIVFACIMEGLFFYVGFVQILALGRQNKMIGSSELYQYILRDESMHCNF
GIDLINTIKMENPNLWTTEFCKEIEQLFLKAIELEYYYAEDTMPKGILGLNVKTFKSYLR
FIANCRMKQIGIKQIFPYERNPFPWMSEMIHIKKESNFFETRVMEYQSGGTLDWE
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy8868
(355 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TIGR_CMR|CBU_1554 - symbol:CBU_1554 "ribonucleoside-dipho... 1213 2.1e-123 1
UNIPROTKB|Q48FF0 - symbol:nrdB "Ribonucleoside-diphosphat... 1159 1.1e-117 1
UNIPROTKB|Q886C0 - symbol:nrdB "Ribonucleoside-diphosphat... 1152 6.2e-117 1
TIGR_CMR|APH_0560 - symbol:APH_0560 "ribonucleoside-dipho... 424 8.7e-40 1
TIGR_CMR|ECH_0766 - symbol:ECH_0766 "ribonucleoside-dipho... 418 3.7e-39 1
TIGR_CMR|CJE_0282 - symbol:CJE_0282 "ribonucleoside-dipho... 384 1.5e-35 1
TIGR_CMR|NSE_0520 - symbol:NSE_0520 "ribonucleoside-dipho... 374 1.7e-34 1
FB|FBgn0011704 - symbol:RnrS "Ribonucleoside diphosphate ... 317 1.9e-28 1
SGD|S000003563 - symbol:RNR2 "Ribonucleotide-diphosphate ... 245 1.4e-19 1
DICTYBASE|DDB_G0274021 - symbol:rnrB-2 "ribonucleoside-di... 234 1.7e-18 1
DICTYBASE|DDB_G0272616 - symbol:rnrB-1 "ribonucleoside-di... 234 1.7e-18 1
GENEDB_PFALCIPARUM|PF14_0053 - symbol:PF14_0053 "ribonucl... 234 2.6e-18 1
UNIPROTKB|Q8IM38 - symbol:PF14_0053 "Ribonucleotide reduc... 234 2.6e-18 1
TAIR|locus:2088040 - symbol:RNR2A "ribonucleotide reducta... 232 4.0e-18 1
ZFIN|ZDB-GENE-030616-614 - symbol:rrm2b "ribonucleotide r... 232 5.3e-18 1
UNIPROTKB|E1BFQ8 - symbol:RRM2B "Uncharacterized protein"... 231 7.6e-18 1
CGD|CAL0001735 - symbol:RNR22 species:5476 "Candida albic... 233 9.2e-18 1
UNIPROTKB|Q59U83 - symbol:RNR22 "Putative uncharacterized... 233 9.2e-18 1
UNIPROTKB|F1P0T9 - symbol:RRM2B "Uncharacterized protein"... 227 1.2e-17 1
UNIPROTKB|E2RQ55 - symbol:RRM2B "Uncharacterized protein"... 231 2.6e-17 1
CGD|CAL0002245 - symbol:RNR21 species:5476 "Candida albic... 230 2.8e-17 1
UNIPROTKB|F1S0R3 - symbol:RRM2B "Uncharacterized protein"... 226 3.8e-17 1
ZFIN|ZDB-GENE-990415-25 - symbol:rrm2 "ribonucleotide red... 227 5.2e-17 1
UNIPROTKB|D4ADQ1 - symbol:Rrm2b "Protein Rrm2b" species:1... 224 6.9e-17 1
UNIPROTKB|E1BXP4 - symbol:RRM2 "Uncharacterized protein" ... 226 7.1e-17 1
RGD|1306045 - symbol:Rrm2b "ribonucleotide reductase M2 B... 224 7.2e-17 1
MGI|MGI:2155865 - symbol:Rrm2b "ribonucleotide reductase ... 223 9.7e-17 1
UNIPROTKB|Q7LG56 - symbol:RRM2B "Ribonucleoside-diphospha... 223 9.7e-17 1
UNIPROTKB|I3LUY0 - symbol:RRM2 "Uncharacterized protein" ... 220 1.4e-16 1
UNIPROTKB|H0YAV1 - symbol:RRM2B "Ribonucleoside-diphospha... 223 2.1e-16 1
TAIR|locus:2092030 - symbol:TSO2 "TSO MEANING 'UGLY' IN C... 218 2.9e-16 1
UNIPROTKB|P31350 - symbol:RRM2 "Ribonucleoside-diphosphat... 220 4.2e-16 1
UNIPROTKB|E1BI58 - symbol:RRM2 "Uncharacterized protein" ... 220 4.2e-16 1
UNIPROTKB|Q60561 - symbol:RRM2 "Ribonucleoside-diphosphat... 219 5.5e-16 1
RGD|2323655 - symbol:LOC100359539 "ribonucleotide reducta... 218 7.6e-16 1
UNIPROTKB|Q4R7Q7 - symbol:RRM2 "Ribonucleoside-diphosphat... 215 1.8e-15 1
RGD|1598310 - symbol:Rrm2 "ribonucleotide reductase M2" s... 215 1.8e-15 1
MGI|MGI:98181 - symbol:Rrm2 "ribonucleotide reductase M2"... 214 2.3e-15 1
ASPGD|ASPL0000055511 - symbol:AN0067 species:162425 "Emer... 213 3.7e-15 1
UNIPROTKB|C9JXC1 - symbol:RRM2 "Ribonucleoside-diphosphat... 202 8.9e-15 1
WB|WBGene00004392 - symbol:rnr-2 species:6239 "Caenorhabd... 205 2.8e-14 1
UNIPROTKB|E2R7H9 - symbol:RRM2 "Uncharacterized protein" ... 204 3.6e-14 1
TIGR_CMR|BA_1372 - symbol:BA_1372 "ribonucleoside-diphosp... 198 8.9e-14 1
POMBASE|SPBC25D12.04 - symbol:suc22 "ribonucleotide reduc... 193 8.1e-13 1
UNIPROTKB|Q4JQV7 - symbol:ORF18 "Ribonucleoside-diphospha... 184 3.6e-12 1
UNIPROTKB|I3LV77 - symbol:I3LV77 "Uncharacterized protein... 187 3.7e-12 1
TIGR_CMR|SO_2416 - symbol:SO_2416 "ribonucleoside-diphosp... 184 8.1e-12 1
WB|WBGene00019055 - symbol:F58F9.1 species:6239 "Caenorha... 143 1.2e-11 2
TIGR_CMR|CPS_2327 - symbol:CPS_2327 "ribonucleotide reduc... 170 3.4e-10 1
UNIPROTKB|Q9KSK1 - symbol:VC1255 "Ribonucleoside-diphosph... 169 4.9e-10 1
TIGR_CMR|VC_1255 - symbol:VC_1255 "ribonucleoside-diphosp... 169 4.9e-10 1
UNIPROTKB|P0C701 - symbol:BaRF1 "Ribonucleoside-diphospha... 163 1.2e-09 1
UNIPROTKB|P69924 - symbol:nrdB species:83333 "Escherichia... 164 1.7e-09 1
UNIPROTKB|Q50549 - symbol:nrdF2 "Ribonucleoside-diphospha... 156 9.5e-09 1
SGD|S000003412 - symbol:RNR4 "Ribonucleotide-diphosphate ... 150 5.5e-08 1
WB|WBGene00017610 - symbol:F19G12.2 species:6239 "Caenorh... 154 6.5e-08 1
UNIPROTKB|P37146 - symbol:nrdF species:83333 "Escherichia... 144 2.2e-07 1
DICTYBASE|DDB_G0291764 - symbol:DDB_G0291764 "ribonucleot... 113 0.00045 1
>TIGR_CMR|CBU_1554 [details] [associations]
symbol:CBU_1554 "ribonucleoside-diphosphate reductase,
beta subunit" species:227377 "Coxiella burnetii RSA 493"
[GO:0004748 "ribonucleoside-diphosphate reductase activity,
thioredoxin disulfide as acceptor" evidence=ISS] [GO:0009265
"2'-deoxyribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR000358 InterPro:IPR009078 InterPro:IPR012348
InterPro:IPR026023 Pfam:PF00268 PIRSF:PIRSF000355
UniPathway:UPA00326 GO:GO:0006260 GO:GO:0046914 EMBL:AE016828
GenomeReviews:AE016828_GR SUPFAM:SSF47240 Gene3D:1.10.620.20
GO:GO:0009263 GO:GO:0005971 GO:GO:0004748 GO:GO:0009186
PANTHER:PTHR23409 KO:K00526 OMA:ICNRRCQ HOGENOM:HOG000255976
ProtClustDB:PRK07209 RefSeq:NP_820537.1 ProteinModelPortal:Q83BF5
SMR:Q83BF5 GeneID:1209464 KEGG:cbu:CBU_1554 PATRIC:17931869
BioCyc:CBUR227377:GJ7S-1535-MONOMER Uniprot:Q83BF5
Length = 401
Score = 1213 (432.1 bits), Expect = 2.1e-123, P = 2.1e-123
Identities = 219/337 (64%), Positives = 267/337 (79%)
Query: 19 RINKINKQIINGHTDVNQLVPFKYNWAWDRYLSSCANHWMPQEINMQRDIELWKNPIGLT 78
RI +K+IIN H D+NQLVPFKY WAW +YLS CANHWMP EINM DI LWK+P GLT
Sbjct: 64 RIRVDDKKIINCHADLNQLVPFKYTWAWQKYLSGCANHWMPNEINMTADIALWKDPNGLT 123
Query: 79 EEERRLVKRNLGFFSTADSLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIV 138
+ER +VKR+LGFFSTADSL ANN+VL YRHIT PECRQYLLRQAFEEA+HTHAYQYI+
Sbjct: 124 ADERTIVKRSLGFFSTADSLVANNLVLAIYRHITNPECRQYLLRQAFEEALHTHAYQYII 183
Query: 139 ESLGLDELEIFNAYHEIKSIRDKDEFLIPFIDVLTDLKFKTGNTKNDQKLLKSLIVFACI 198
ESLGLDE E+FN Y E+ ++ K + +P+ L D FKTG ++D++LL+ LI F +
Sbjct: 184 ESLGLDEAEVFNMYRELPAVSKKAVWALPYTQSLADPNFKTGTPEDDRRLLRDLIAFYVV 243
Query: 199 MEGLFFYVGFVQILALGRQNKMIGSSELYQYILRDESMHCNFGIDLINTIKMENPNLWTT 258
EGLFFYVGF QILA+GR+ KM G+SE +QYILRDESMH NFGID+IN IK+ENP+LW
Sbjct: 244 FEGLFFYVGFTQILAMGRRGKMTGTSEQFQYILRDESMHVNFGIDVINQIKIENPHLWNK 303
Query: 259 EFCKEIEQLFLKAIELEYYYAEDTMPKGILGLNVKTFKSYLRFIANCRMKQIGIKQIFPY 318
F KE+ ++ L+ +ELEY YA+DTMP+GILGLN FK YL++IAN R QIG+ + FP
Sbjct: 304 NFQKEVIEMILEGVELEYQYAKDTMPRGILGLNANMFKDYLQYIANRRCAQIGLPEQFPG 363
Query: 319 ERNPFPWMSEMIHIKKESNFFETRVMEYQSGGTLDWE 355
+N FPWMSEM+ +KKE NFFETRV+EYQ+GGTL W+
Sbjct: 364 AKNTFPWMSEMMDLKKEKNFFETRVIEYQAGGTLKWD 400
>UNIPROTKB|Q48FF0 [details] [associations]
symbol:nrdB "Ribonucleoside-diphosphate reductase subunit
beta" species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0004748 "ribonucleoside-diphosphate reductase activity,
thioredoxin disulfide as acceptor" evidence=ISS] [GO:0009265
"2'-deoxyribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR000358 InterPro:IPR009078 InterPro:IPR012348
InterPro:IPR026023 Pfam:PF00268 PIRSF:PIRSF000355
UniPathway:UPA00326 GO:GO:0006260 GO:GO:0046914 EMBL:CP000058
GenomeReviews:CP000058_GR SUPFAM:SSF47240 Gene3D:1.10.620.20
GO:GO:0009265 GO:GO:0005971 GO:GO:0004748 GO:GO:0009186
eggNOG:COG0208 PANTHER:PTHR23409 KO:K00526 OMA:ICNRRCQ
RefSeq:YP_275887.1 ProteinModelPortal:Q48FF0 SMR:Q48FF0
STRING:Q48FF0 GeneID:3559839 KEGG:psp:PSPPH_3745 PATRIC:19976927
HOGENOM:HOG000255976 ProtClustDB:PRK07209 Uniprot:Q48FF0
Length = 415
Score = 1159 (413.0 bits), Expect = 1.1e-117, P = 1.1e-117
Identities = 206/337 (61%), Positives = 262/337 (77%)
Query: 19 RINKINKQIINGHTDVNQLVPFKYNWAWDRYLSSCANHWMPQEINMQRDIELWKNPIGLT 78
R+ K +IN D+NQLVPFKY+WAW +YL CANHWMPQE+NM DI LWKNP GLT
Sbjct: 79 RVAVDEKMMINCRADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMTADIALWKNPEGLT 138
Query: 79 EEERRLVKRNLGFFSTADSLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIV 138
++ERR+V RNLGFFSTADSL ANN+VL YR IT PECRQY+LRQAFEEAIHTHAYQY +
Sbjct: 139 DDERRIVMRNLGFFSTADSLVANNLVLAVYRLITNPECRQYILRQAFEEAIHTHAYQYCI 198
Query: 139 ESLGLDELEIFNAYHEIKSIRDKDEFLIPFIDVLTDLKFKTGNTKNDQKLLKSLIVFACI 198
ESL +DE EIFN YHEI S+ K + + + ++D KF+TG + D++LL++LI + C+
Sbjct: 199 ESLAMDEGEIFNMYHEIPSVAKKAAWGLKYTRSISDPKFETGTVETDKELLRNLIAYYCV 258
Query: 199 MEGLFFYVGFVQILALGRQNKMIGSSELYQYILRDESMHCNFGIDLINTIKMENPNLWTT 258
+EG+FFY GF QIL++GR+NKM G +E +QYILRDESMH NFGID+IN IK+ENP+LW
Sbjct: 259 LEGIFFYCGFTQILSMGRRNKMTGVAEQFQYILRDESMHLNFGIDVINQIKIENPHLWDA 318
Query: 259 EFCKEIEQLFLKAIELEYYYAEDTMPKGILGLNVKTFKSYLRFIANCRMKQIGIKQIFPY 318
E +E Q+ L+ +LE YA DTMP+G+LG+N + YL+FIAN R+ QIG+K+ +P
Sbjct: 319 EMKEEATQMILQGTQLEIEYARDTMPRGVLGMNAAMMEDYLKFIANRRLSQIGLKEEYPG 378
Query: 319 ERNPFPWMSEMIHIKKESNFFETRVMEYQSGGTLDWE 355
NPFPWMSE++ +KKE NFFETRV+EYQ+GG L W+
Sbjct: 379 TTNPFPWMSEIMDLKKEKNFFETRVIEYQTGGALSWD 415
>UNIPROTKB|Q886C0 [details] [associations]
symbol:nrdB "Ribonucleoside-diphosphate reductase subunit
beta" species:223283 "Pseudomonas syringae pv. tomato str. DC3000"
[GO:0004748 "ribonucleoside-diphosphate reductase activity,
thioredoxin disulfide as acceptor" evidence=ISS] [GO:0009265
"2'-deoxyribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR000358 InterPro:IPR009078 InterPro:IPR012348
InterPro:IPR026023 Pfam:PF00268 PIRSF:PIRSF000355
UniPathway:UPA00326 GO:GO:0006260 GO:GO:0046914 EMBL:AE016853
GenomeReviews:AE016853_GR SUPFAM:SSF47240 Gene3D:1.10.620.20
GO:GO:0009265 GO:GO:0005971 GO:GO:0004748 GO:GO:0009186
eggNOG:COG0208 PANTHER:PTHR23409 KO:K00526 OMA:ICNRRCQ
HOGENOM:HOG000255976 ProtClustDB:PRK07209 RefSeq:NP_791486.1
ProteinModelPortal:Q886C0 SMR:Q886C0 GeneID:1183298
KEGG:pst:PSPTO_1661 PATRIC:19994570
BioCyc:PSYR223283:GJIX-1691-MONOMER Uniprot:Q886C0
Length = 415
Score = 1152 (410.6 bits), Expect = 6.2e-117, P = 6.2e-117
Identities = 205/337 (60%), Positives = 261/337 (77%)
Query: 19 RINKINKQIINGHTDVNQLVPFKYNWAWDRYLSSCANHWMPQEINMQRDIELWKNPIGLT 78
R+ K +IN D+NQLVPFKY+WAW +YL CANHWMPQE+NM DI LWK+P GLT
Sbjct: 79 RVAVDEKMMINCRADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMTADIALWKDPEGLT 138
Query: 79 EEERRLVKRNLGFFSTADSLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIV 138
++ERR+V RNLGFFSTADSL ANN+VL YR IT PECRQY+LRQAFEEAIHTHAYQY +
Sbjct: 139 DDERRIVMRNLGFFSTADSLVANNLVLAVYRLITNPECRQYILRQAFEEAIHTHAYQYCI 198
Query: 139 ESLGLDELEIFNAYHEIKSIRDKDEFLIPFIDVLTDLKFKTGNTKNDQKLLKSLIVFACI 198
ESL +DE EIFN YHEI S+ K + + + ++D KF+TG D++LL++LI + C+
Sbjct: 199 ESLAMDEGEIFNMYHEIPSVAKKAAWGLKYTRSISDPKFETGTVDTDKELLRNLIAYYCV 258
Query: 199 MEGLFFYVGFVQILALGRQNKMIGSSELYQYILRDESMHCNFGIDLINTIKMENPNLWTT 258
+EG+FFY GF QIL++GR+NKM G +E +QYILRDESMH NFGID+IN IK+ENP+LW
Sbjct: 259 LEGIFFYCGFTQILSMGRRNKMTGVAEQFQYILRDESMHLNFGIDVINQIKIENPHLWDA 318
Query: 259 EFCKEIEQLFLKAIELEYYYAEDTMPKGILGLNVKTFKSYLRFIANCRMKQIGIKQIFPY 318
E +E Q+ L+ +LE YA DTMP+G+LG+N + YL+FIAN R+ QIG+K+ +P
Sbjct: 319 EMKEEATQMILQGTQLEIEYARDTMPRGVLGMNAAMMEDYLKFIANRRLSQIGLKEEYPG 378
Query: 319 ERNPFPWMSEMIHIKKESNFFETRVMEYQSGGTLDWE 355
NPFPWMSE++ +KKE NFFETRV+EYQ+GG L W+
Sbjct: 379 TTNPFPWMSEIMDLKKEKNFFETRVIEYQTGGALSWD 415
>TIGR_CMR|APH_0560 [details] [associations]
symbol:APH_0560 "ribonucleoside-diphosphate reductase,
beta subunit" species:212042 "Anaplasma phagocytophilum HZ"
[GO:0004748 "ribonucleoside-diphosphate reductase activity,
thioredoxin disulfide as acceptor" evidence=ISS] [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=ISS]
[GO:0009265 "2'-deoxyribonucleotide biosynthetic process"
evidence=ISS] InterPro:IPR000358 InterPro:IPR009078
InterPro:IPR012348 InterPro:IPR026023 Pfam:PF00268
PIRSF:PIRSF000355 UniPathway:UPA00326 GO:GO:0006260 GO:GO:0046914
EMBL:CP000235 GenomeReviews:CP000235_GR SUPFAM:SSF47240
Gene3D:1.10.620.20 GO:GO:0009263 GO:GO:0005971 GO:GO:0004748
GO:GO:0009186 eggNOG:COG0208 PANTHER:PTHR23409 KO:K00526
ProtClustDB:PRK09614 HOGENOM:HOG000064511 RefSeq:YP_505152.1
ProteinModelPortal:Q2GKE9 STRING:Q2GKE9 GeneID:3930960
KEGG:aph:APH_0560 PATRIC:20949782 OMA:KEEQIHG
BioCyc:APHA212042:GHPM-584-MONOMER Uniprot:Q2GKE9
Length = 323
Score = 424 (154.3 bits), Expect = 8.7e-40, P = 8.7e-40
Identities = 100/321 (31%), Positives = 170/321 (52%)
Query: 39 PFKYNWAWDRYLSSCANHWMPQEINMQRDIELWKNPIGLTEEERRLVKRNLGFFSTADSL 98
PF Y WA+D +L HW+P+E+ + D++ WK L+E+E+ L+ + FF+ AD +
Sbjct: 12 PFDYPWAYDAWLCQQRIHWLPEEVPLADDVQDWKTM--LSEKEKNLLVQIFRFFTQAD-I 68
Query: 99 AANNIVLGTYRHITAPECRQYLLRQAFE--EAIHTHAYQYIVESLGLDELEIFNAYHEIK 156
NN + Y +I P ++ AF E IH AY Y+++++G+ E+E + A+ + +
Sbjct: 69 EVNNCYMKHYSNIFRPT-EICMMLSAFSNMETIHVAAYSYLLDTIGMPEVE-YQAFLKFE 126
Query: 157 SIRDKDEFLIPFIDVLTDLKFKTGNTKNDQKLLKSLIVFACIMEGLFFYVGFVQILALGR 216
++ K +++ F + + G+ ++ + K+L VF EGL + F +L R
Sbjct: 127 VMKKKYDYMQRFEEC------RRGDKRH---VAKTLAVFGAFTEGLQLFASFAILLNFQR 177
Query: 217 QNKMIGSSELYQYILRDESMHCNFGIDLINTIKMENPNLWTTEFCKEIEQLFLKAIELEY 276
KM G ++ + RDES+H + I L NT EN +W + +E+ + LE
Sbjct: 178 FGKMKGMGQIIAWSARDESLHTDSIIRLFNTFVHENGEIWDDDLKQELYDACKVIVMLED 237
Query: 277 YYAEDTMPKG-ILGLNVKTFKSYLRFIANCRMKQIGIKQIFPYERNPFPWMSEMIHIKKE 335
+ + G + GL+ K Y+RFIAN R+KQ+ ++ I+ NP PW+ E+++ +
Sbjct: 238 EFIDLAFALGDVEGLSACEVKRYIRFIANRRLKQLHLEPIYDVAENPLPWLDEILNGVEH 297
Query: 336 SNFFETRVMEYQSGGTLD-WE 355
+NFFE RV EY T WE
Sbjct: 298 TNFFENRVTEYARAATEGTWE 318
>TIGR_CMR|ECH_0766 [details] [associations]
symbol:ECH_0766 "ribonucleoside-diphosphate reductase,
beta subunit" species:205920 "Ehrlichia chaffeensis str. Arkansas"
[GO:0004748 "ribonucleoside-diphosphate reductase activity,
thioredoxin disulfide as acceptor" evidence=ISS] [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=ISS]
[GO:0009265 "2'-deoxyribonucleotide biosynthetic process"
evidence=ISS] InterPro:IPR000358 InterPro:IPR009078
InterPro:IPR012348 InterPro:IPR026023 Pfam:PF00268
PIRSF:PIRSF000355 UniPathway:UPA00326 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0006260 GO:GO:0046914
SUPFAM:SSF47240 Gene3D:1.10.620.20 GO:GO:0009263 GO:GO:0005971
GO:GO:0004748 GO:GO:0009186 eggNOG:COG0208 PANTHER:PTHR23409
KO:K00526 OMA:ICNRRCQ ProtClustDB:PRK09614 HOGENOM:HOG000064511
RefSeq:YP_507564.1 ProteinModelPortal:Q2GG69 STRING:Q2GG69
GeneID:3927647 KEGG:ech:ECH_0766 PATRIC:20576964
BioCyc:ECHA205920:GJNR-769-MONOMER Uniprot:Q2GG69
Length = 324
Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
Identities = 99/322 (30%), Positives = 169/322 (52%)
Query: 39 PFKYNWAWDRYLSSCANHWMPQEINMQRDIELWKNPIGLTEEERRLVKRNLGFFSTADSL 98
PF Y WA+D +L HW+P+E+ + D++ WK L+E+E+ L+ + FF+ AD +
Sbjct: 12 PFNYPWAYDAWLCQQRIHWLPEEVPLADDVQDWKTV--LSEKEKNLLVQIFRFFTQAD-I 68
Query: 99 AANNIVLGTYRHITAPECRQYLLRQAFE--EAIHTHAYQYIVESLGLDELEIFNAYHEIK 156
NN + Y +I P ++ AF E IH AY Y+++++G+ E+E + A+ + +
Sbjct: 69 EVNNCYMKHYSNIFKPT-EVCMMLSAFSNMETIHIAAYSYLLDTIGMPEIE-YQAFLKFE 126
Query: 157 SIRDKDEFLIPFIDVLTDLKFKTGNTKNDQK-LLKSLIVFACIMEGLFFYVGFVQILALG 215
++ K +++ F + KND++ + K+L VF EGL + F +L
Sbjct: 127 VMKKKYDYMQRFEEC----------RKNDKRHVAKTLAVFGAFTEGLQLFASFAILLNFQ 176
Query: 216 RQNKMIGSSELYQYILRDESMHCNFGIDLINTIKMENPNLWTTEFCKEIEQLFLKAIELE 275
R KM G ++ + +RDE++H I L NT EN +W +E+ + + LE
Sbjct: 177 RFGKMKGMGQIIAWSVRDETLHTESIIRLFNTFIQENYEIWDDSLKQELYEACRIIVSLE 236
Query: 276 YYYAEDTMPKG-ILGLNVKTFKSYLRFIANCRMKQIGIKQIFPYERNPFPWMSEMIHIKK 334
+ G + GL+ K K Y+R+IAN R+ Q+ ++ I+ +NP W+ E+++ +
Sbjct: 237 DEFINLAFACGDVEGLSSKEVKEYIRYIANRRLLQLNLEPIYDTNKNPLLWLDEILNGVE 296
Query: 335 ESNFFETRVMEYQSGGTLD-WE 355
+NFFE RV EY T WE
Sbjct: 297 HTNFFENRVTEYARAATEGTWE 318
>TIGR_CMR|CJE_0282 [details] [associations]
symbol:CJE_0282 "ribonucleoside-diphosphate reductase,
beta subunit" species:195099 "Campylobacter jejuni RM1221"
[GO:0004748 "ribonucleoside-diphosphate reductase activity,
thioredoxin disulfide as acceptor" evidence=ISS] [GO:0009265
"2'-deoxyribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR000358 InterPro:IPR009078 InterPro:IPR012348
InterPro:IPR026023 Pfam:PF00268 PIRSF:PIRSF000355
UniPathway:UPA00326 GO:GO:0006260 GO:GO:0046914 EMBL:CP000025
GenomeReviews:CP000025_GR SUPFAM:SSF47240 Gene3D:1.10.620.20
GO:GO:0009263 GO:GO:0005971 GO:GO:0004748 GO:GO:0009186
eggNOG:COG0208 PANTHER:PTHR23409 KO:K00526 OMA:LEPMFLG
ProtClustDB:PRK09614 RefSeq:YP_178304.1 ProteinModelPortal:Q5HWN1
STRING:Q5HWN1 GeneID:3231044 KEGG:cjr:CJE0282 PATRIC:20042262
HOGENOM:HOG000056923 BioCyc:CJEJ195099:GJC0-287-MONOMER
Uniprot:Q5HWN1
Length = 340
Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 98/326 (30%), Positives = 171/326 (52%)
Query: 29 NGHTDVNQLVPFKYNWA---WDRYLSSCANHWMPQEINMQRDIELWKNPIGLTEEERRLV 85
N H +N KY WA WD L AN W P+E++ +D ++ LT E+R+
Sbjct: 24 NPHGILN-FTKAKYTWALKLWD--LME-ANTWFPKEVDTTKDALDYR--CNLTVGEKRMY 77
Query: 86 KRNLGFFSTADSLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIVESLGLDE 145
+ DS NN+ +ITAPE L RQA+EEA H+ +Y +VE++ D
Sbjct: 78 DLVWSQLISMDSFQTNNLADNINPYITAPEINAVLARQAYEEANHSKSYAVMVEAI-CDN 136
Query: 146 LE-IFNAYHEIKSIRDKDEFLIPFIDVLTDLKFKTGNTKNDQKLLKSLIVFACIMEGLFF 204
+ I+ +++R+K++F+ + L G+ +D KLL +++ I+EG++F
Sbjct: 137 TDLIYEMEKHDETLREKNDFISSIYEELA------GDV-DDNKLLLAMVANQ-ILEGVYF 188
Query: 205 YVGFVQILALGRQNKMIGSSELYQYILRDESMHCNFGIDLINTIKMENPNLWTTEFCKEI 264
Y GF I AL R KM+GS+++ ++I RDE H ++IN+++ E P+L+ E +I
Sbjct: 189 YSGFTAIYALARAGKMLGSAQMIRFIQRDEITHLLLFQNMINSVRKERPDLFHDENINKI 248
Query: 265 EQLFLKAIELEYYYAEDTMPKGILGLNVKTFKSYLRFIANCRMKQIGIKQIFPYERNPFP 324
+F KA +LE + + I+G + Y+ ++ + R+ I + +++ ++P
Sbjct: 249 YDMFKKAGDLEIKWGKYITQNQIMGFTDDIIEEYIHYLVDQRLSAINLDKLYN-AKHPIK 307
Query: 325 WMSEMIHIK-KESNFFETRVMEYQSG 349
W+ + ++SNFFE++V Y G
Sbjct: 308 WVDDFSKFNDQKSNFFESKVTNYSKG 333
>TIGR_CMR|NSE_0520 [details] [associations]
symbol:NSE_0520 "ribonucleoside-diphosphate reductase,
beta subunit" species:222891 "Neorickettsia sennetsu str. Miyayama"
[GO:0004748 "ribonucleoside-diphosphate reductase activity,
thioredoxin disulfide as acceptor" evidence=ISS] [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=ISS]
[GO:0009265 "2'-deoxyribonucleotide biosynthetic process"
evidence=ISS] InterPro:IPR000358 InterPro:IPR009078
InterPro:IPR012348 InterPro:IPR026023 Pfam:PF00268
PIRSF:PIRSF000355 UniPathway:UPA00326 GO:GO:0006260 GO:GO:0046914
EMBL:CP000237 GenomeReviews:CP000237_GR SUPFAM:SSF47240
Gene3D:1.10.620.20 GO:GO:0009263 GO:GO:0005971 GO:GO:0004748
GO:GO:0009186 eggNOG:COG0208 PANTHER:PTHR23409 KO:K00526
OMA:YIADWRL ProtClustDB:PRK09614 RefSeq:YP_506404.1
ProteinModelPortal:Q2GDP2 STRING:Q2GDP2 GeneID:3932158
KEGG:nse:NSE_0520 PATRIC:22681089 HOGENOM:HOG000064511
BioCyc:NSEN222891:GHFU-540-MONOMER Uniprot:Q2GDP2
Length = 322
Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 93/320 (29%), Positives = 160/320 (50%)
Query: 39 PFKYNWAWDRYLSSCANHWMPQEINMQRDIELWKNPIGLTEEERRLVKRNLGFFSTADSL 98
PF+Y+WA+ + HW+P+EI M D++ W + I TE + L+ + FF+ AD +
Sbjct: 12 PFQYDWAYQAWEIQQKIHWLPEEIPMADDVQDWHHKICGTE--KNLLTQIFRFFTQAD-V 68
Query: 99 AANNIVLGTYRHI-TAPECRQYLLRQAFEEAIHTHAYQYIVESLGLDELEIFNAYHEIKS 157
++ + Y + PE L A E IH AY ++++++G+ E E + A+ + K
Sbjct: 69 EVHDCYMRHYAGVFKPPEVCMMLTAFANMETIHIAAYAHLLDTVGMPETE-YLAFTKYKQ 127
Query: 158 IRDKDEFLIPFIDVLTDLKFKTGNTKNDQKLLKSLIVFACIMEGLFFYVGFVQILALGRQ 217
+++K E+L F N ++ K+L V+ EGL + F +L R
Sbjct: 128 MKEKCEYLKAF------------KMDNPTEIAKTLAVYGAFTEGLQLFASFAILLNFPRF 175
Query: 218 NKMIGSSELYQYILRDESMHCNFGIDLINTIKMENPNLWTTEFCKEIEQLFLKAIELEYY 277
NKM G ++ Y +RDE++H N L T +EN N+ + EI ++ + E
Sbjct: 176 NKMKGMGQIIAYSVRDETLHSNSITKLFRTFLLEN-NIDKFKLEAEIREICNAMVHHEDA 234
Query: 278 YAEDTMPKG-ILGLNVKTFKSYLRFIANCRMKQIGIKQIFPYERNPFPWMSEMIHIKKES 336
+ + G + GL K Y+R+IAN R+KQ+G +I+ + NP W+ +++ + +
Sbjct: 235 FIDLAFEMGDVEGLKASEVKEYIRYIANLRLKQLGFSEIYEQKVNPLLWLEAVLNTVEHT 294
Query: 337 NFFETRVMEYQSGGTLD-WE 355
NFFE + EY T W+
Sbjct: 295 NFFENKATEYSKAATKGTWD 314
>FB|FBgn0011704 [details] [associations]
symbol:RnrS "Ribonucleoside diphosphate reductase small
subunit" species:7227 "Drosophila melanogaster" [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=ISS;NAS]
[GO:0004748 "ribonucleoside-diphosphate reductase activity,
thioredoxin disulfide as acceptor" evidence=ISS] [GO:0006260 "DNA
replication" evidence=NAS] [GO:0009186 "deoxyribonucleoside
diphosphate metabolic process" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0046914 "transition
metal ion binding" evidence=IEA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000358 InterPro:IPR009078 InterPro:IPR012348
Pfam:PF00268 PROSITE:PS00368 UniPathway:UPA00326 EMBL:AE013599
GO:GO:0022008 GO:GO:0006260 GO:GO:0046914 GO:GO:0006919
SUPFAM:SSF47240 KO:K10808 Gene3D:1.10.620.20 GO:GO:0005971
GO:GO:0004748 GO:GO:0009186 eggNOG:COG0208 PANTHER:PTHR23409
GeneTree:ENSGT00390000013305 OMA:ICNRRCQ EMBL:AY051936 EMBL:U09370
RefSeq:NP_525111.1 UniGene:Dm.569 ProteinModelPortal:P48592
SMR:P48592 DIP:DIP-18112N IntAct:P48592 MINT:MINT-336377
STRING:P48592 PaxDb:P48592 EnsemblMetazoa:FBtr0088046 GeneID:36280
KEGG:dme:Dmel_CG8975 CTD:36280 FlyBase:FBgn0011704
InParanoid:P48592 OrthoDB:EOG47H45H PhylomeDB:P48592 ChiTaRS:RnrS
GenomeRNAi:36280 NextBio:797712 Bgee:P48592 GermOnline:CG8975
Uniprot:P48592
Length = 393
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 80/319 (25%), Positives = 159/319 (49%)
Query: 37 LVPFKYNWAWDRYLSSCANHWMPQEINMQRDIELWKNPIGLTEEERRLVKRNLGFFSTAD 96
+ P +Y+ W Y + A+ W +E+++ +D+ W L ++ER + L FF+ +D
Sbjct: 86 IFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDWHR---LKDDERHFISHVLAFFAASD 142
Query: 97 SLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIVESLGLDELE---IFNAYH 153
+ N+V + + E R + Q E +H+ Y ++++ D + +FNA
Sbjct: 143 GIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYSVLIDTYIRDPHQREYLFNAIE 202
Query: 154 EIKSIRDKDEFLIPFIDVLTDLKFKTGNTKNDQKLLKSLIVFACIMEGLFFYVGFVQILA 213
+ +++ K ++ + +I K+ N + +I FA + EG+FF F I
Sbjct: 203 TMPAVKRKADWALSWISS------KSANFG------ERIIAFAAV-EGIFFSGSFASIFW 249
Query: 214 LGRQNKMIGSSELYQYILRDESMHCNFGIDLINTIKMENPNLWTTEFCKEIEQLFLKAIE 273
L ++ M G + + I RDE +HC+F + + + ++ P + I ++ A+
Sbjct: 250 LKKRGLMPGLTFSNELISRDEGLHCDFAVLMFQHL-VQRPKR------ERIIEIIRDAVA 302
Query: 274 LEYYYAEDTMPKGILGLNVKTFKSYLRFIANCRMKQIGIKQIFPYERNPFPWMSEMIHIK 333
+E + D +P ++G+N Y+ F+A+ + ++G+ +I+ +NPF +M EMI +
Sbjct: 303 IEQEFLTDALPVNLIGMNCDLMSQYIEFVADRLLVELGVGKIYN-TKNPFNFM-EMISLD 360
Query: 334 KESNFFETRVMEYQSGGTL 352
++NFFE +V EYQ G +
Sbjct: 361 GKTNFFEKKVGEYQRMGVV 379
>SGD|S000003563 [details] [associations]
symbol:RNR2 "Ribonucleotide-diphosphate reductase (RNR)"
species:4932 "Saccharomyces cerevisiae" [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=IEA;IDA] [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0009186 "deoxyribonucleoside diphosphate metabolic process"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0046914 "transition metal ion binding" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0009263 "deoxyribonucleotide
biosynthetic process" evidence=IDA] InterPro:IPR000358
InterPro:IPR009078 InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368
UniPathway:UPA00326 SGD:S000003563 GO:GO:0005634 EMBL:BK006943
GO:GO:0006260 GO:GO:0046914 SUPFAM:SSF47240 KO:K10808
Gene3D:1.10.620.20 GO:GO:0009263 GO:GO:0005971 GO:GO:0004748
GO:GO:0009186 PDB:2CVY PDBsum:2CVY eggNOG:COG0208
HOGENOM:HOG000255975 PANTHER:PTHR23409 GeneTree:ENSGT00390000013305
OMA:ICNRRCQ OrthoDB:EOG4QZBVT EMBL:M17221 EMBL:M17789 EMBL:Z49301
PIR:A26916 RefSeq:NP_012508.1 PDB:1JK0 PDB:1SMQ PDBsum:1JK0
PDBsum:1SMQ DisProt:DP00487 ProteinModelPortal:P09938 SMR:P09938
DIP:DIP-5671N IntAct:P09938 MINT:MINT-547064 STRING:P09938
PaxDb:P09938 PeptideAtlas:P09938 EnsemblFungi:YJL026W GeneID:853427
KEGG:sce:YJL026W CYGD:YJL026w EvolutionaryTrace:P09938
NextBio:973962 Genevestigator:P09938 GermOnline:YJL026W
Uniprot:P09938
Length = 399
Score = 245 (91.3 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 78/264 (29%), Positives = 126/264 (47%)
Query: 19 RINKINKQ--IINGHTDVNQLVPFKYNWAWDRYLSSCANHWMPQEINMQRDIELWKNPIG 76
++ ++ K+ ++N + L P KY+ W Y + A+ W +EI++ +DI W N
Sbjct: 68 KLKEMEKEEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNR-- 125
Query: 77 LTEEERRLVKRNLGFFSTADSLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQY 136
+ E ER + R L FF+ +D + N+V + PE + + Q E IH+ Y
Sbjct: 126 MNENERFFISRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSL 185
Query: 137 IVESLGLDELE---IFNAYHEIKSIRDKDEFLIPFIDVLTDLKFKTGNTKNDQKLLKSLI 193
++++ D E +FNA H I I +K E+ + +I D F G + L+
Sbjct: 186 LIDTYIKDPKESEFLFNAIHTIPEIGEKAEWALRWIQD-ADALF--G---------ERLV 233
Query: 194 VFACIMEGLFFYVGFVQILALGRQNKMIGSSELYQYILRDESMHCNFGIDLINTIKME-N 252
FA I EG+FF F I L ++ M G + + I RDE +H +F L +K + +
Sbjct: 234 AFASI-EGVFFSGSFASIFWLKKRGMMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPD 292
Query: 253 PNLW---TTEFCKEIEQ-LFLKAI 272
P + TE EIEQ FL A+
Sbjct: 293 PAIVEKIVTE-AVEIEQRYFLDAL 315
Score = 214 (80.4 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 67/233 (28%), Positives = 115/233 (49%)
Query: 127 EAIHTHAYQYIVESLGLDELEIF-NAYHEIKSIRDKDEFLIPFIDVLTDLKFKTG---NT 182
EA + +Q ++E++ + + + Y IK ++ EFL I + ++ K
Sbjct: 164 EAKSFYGFQIMIENIHSETYSLLIDTY--IKDPKES-EFLFNAIHTIPEIGEKAEWALRW 220
Query: 183 KNDQKLL--KSLIVFACIMEGLFFYVGFVQILALGRQNKMIGSSELYQYILRDESMHCNF 240
D L + L+ FA I EG+FF F I L ++ M G + + I RDE +H +F
Sbjct: 221 IQDADALFGERLVAFASI-EGVFFSGSFASIFWLKKRGMMPGLTFSNELICRDEGLHTDF 279
Query: 241 GIDLINTIKME-NPNLWTTEFCKEIEQLFLKAIELEYYYAEDTMPKGILGLNVKTFKSYL 299
L +K + +P + +E++ +A+E+E Y D +P +LG+N Y+
Sbjct: 280 ACLLFAHLKNKPDPAI--------VEKIVTEAVEIEQRYFLDALPVALLGMNADLMNQYV 331
Query: 300 RFIANCRMKQIGIKQIFPYERNPFPWMSEMIHIKKESNFFETRVMEYQSGGTL 352
F+A+ + G K+ + E NPF +M E I + ++NFFE RV +YQ G +
Sbjct: 332 EFVADRLLVAFGNKKYYKVE-NPFDFM-ENISLAGKTNFFEKRVSDYQKAGVM 382
>DICTYBASE|DDB_G0274021 [details] [associations]
symbol:rnrB-2 "ribonucleoside-diphosphate reductase"
species:44689 "Dictyostelium discoideum" [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=IEA;ISS] [GO:0006260 "DNA
replication" evidence=IEA;ISS] [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0046914 "transition metal ion binding"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0009186 "deoxyribonucleoside diphosphate metabolic process"
evidence=IEA] [GO:0042493 "response to drug" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000358
InterPro:IPR009078 InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368
UniPathway:UPA00326 dictyBase:DDB_G0274021 dictyBase:DDB_G0272616
GO:GO:0005634 GO:GO:0042493 GO:GO:0006260 GO:GO:0046914
GenomeReviews:CM000151_GR EMBL:AAFI02000011 EMBL:AAFI02000009
SUPFAM:SSF47240 KO:K10808 Gene3D:1.10.620.20 GO:GO:0005971
GO:GO:0004748 GO:GO:0009186 eggNOG:COG0208 PANTHER:PTHR23409
OMA:ICNRRCQ EMBL:L36941 RefSeq:XP_644369.1 RefSeq:XP_645045.1
ProteinModelPortal:P42521 SMR:P42521 STRING:P42521 PRIDE:P42521
EnsemblProtists:DDB0185062 EnsemblProtists:DDB0238222
GeneID:8618721 GeneID:8619255 KEGG:ddi:DDB_G0272616
KEGG:ddi:DDB_G0274021 ProtClustDB:PTZ00211 Uniprot:P42521
Length = 338
Score = 234 (87.4 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 68/230 (29%), Positives = 116/230 (50%)
Query: 127 EAIHTHAYQYIVESLGLDELEIF-NAYHEIKSIRDKDEFLIPFIDVLTDLKFKTG---NT 182
EA + +Q +E++ + + Y + K +DK L I+ + +K K
Sbjct: 100 EARCFYGFQIAIENIHSETYSLLIETYIKDKQTKDK---LFNAIETIPCIKKKAEWALRW 156
Query: 183 KNDQ-KLLKSLIVFACIMEGLFFYVGFVQILALGRQNKMIGSSELYQYILRDESMHCNFG 241
ND + L+ FA + EG+FF F I L ++ M G + + I RDE +HC+F
Sbjct: 157 INDSDSFAERLVAFAAV-EGIFFSGSFCSIFWLKKRGLMQGLTFSNELISRDEGLHCDFA 215
Query: 242 IDLINTIKME-NPNLWTTEFCKEIEQLFLKAIELEYYYAEDTMPKGILGLNVKTFKSYLR 300
L ++ + +P K IE++ A+E E + +++P ++G+N ++ Y+
Sbjct: 216 CLLYTKLQRKLDP--------KVIEKMIRDAVECEKEFICESLPVDLIGMNSRSMSQYIE 267
Query: 301 FIANCRMKQIGIKQIFPYERNPFPWMSEMIHIKKESNFFETRVMEYQSGG 350
F A+ + +G K+IF NPF WM EMI ++++SNFFE +V EY G
Sbjct: 268 FCADRLVVSLGYKKIFN-SSNPFEWM-EMISLQRKSNFFEGKVAEYAKTG 315
Score = 229 (85.7 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 65/229 (28%), Positives = 107/229 (46%)
Query: 18 ERINKIN---KQIINGHTDVNQLVPFKYNWAWDRYLSSCANHWMPQEINMQRDIELWKNP 74
E INK + + I+ + D L P KY W Y + A+HW+ +EI++ D W+
Sbjct: 2 EEINKKDTFIEPILKENKDRFVLFPIKYPDIWRMYKKALASHWVAEEIDLGNDNVDWEYK 61
Query: 75 IGLTEEERRLVKRNLGFFSTADSLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAY 134
LT+ ER + L FF+ +D + N+ + PE R + Q E IH+ Y
Sbjct: 62 --LTDNERHFISHVLAFFAASDGIVNENLATRFMSEVQIPEARCFYGFQIAIENIHSETY 119
Query: 135 QYIVESLGLDEL---EIFNAYHEIKSIRDKDEFLIPFIDVLTDLKFKTGNTKNDQKLLKS 191
++E+ D+ ++FNA I I+ K E+ + +I+ + +
Sbjct: 120 SLLIETYIKDKQTKDKLFNAIETIPCIKKKAEWALRWIN-------------DSDSFAER 166
Query: 192 LIVFACIMEGLFFYVGFVQILALGRQNKMIGSSELYQYILRDESMHCNF 240
L+ FA + EG+FF F I L ++ M G + + I RDE +HC+F
Sbjct: 167 LVAFAAV-EGIFFSGSFCSIFWLKKRGLMQGLTFSNELISRDEGLHCDF 214
>DICTYBASE|DDB_G0272616 [details] [associations]
symbol:rnrB-1 "ribonucleoside-diphosphate reductase"
species:44689 "Dictyostelium discoideum" [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=IEA;ISS] [GO:0006260 "DNA
replication" evidence=IEA;ISS] [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0046914 "transition metal ion binding"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0009186 "deoxyribonucleoside diphosphate metabolic process"
evidence=IEA] [GO:0042493 "response to drug" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000358
InterPro:IPR009078 InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368
UniPathway:UPA00326 dictyBase:DDB_G0274021 dictyBase:DDB_G0272616
GO:GO:0005634 GO:GO:0042493 GO:GO:0006260 GO:GO:0046914
GenomeReviews:CM000151_GR EMBL:AAFI02000011 EMBL:AAFI02000009
SUPFAM:SSF47240 KO:K10808 Gene3D:1.10.620.20 GO:GO:0005971
GO:GO:0004748 GO:GO:0009186 eggNOG:COG0208 PANTHER:PTHR23409
OMA:ICNRRCQ EMBL:L36941 RefSeq:XP_644369.1 RefSeq:XP_645045.1
ProteinModelPortal:P42521 SMR:P42521 STRING:P42521 PRIDE:P42521
EnsemblProtists:DDB0185062 EnsemblProtists:DDB0238222
GeneID:8618721 GeneID:8619255 KEGG:ddi:DDB_G0272616
KEGG:ddi:DDB_G0274021 ProtClustDB:PTZ00211 Uniprot:P42521
Length = 338
Score = 234 (87.4 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 68/230 (29%), Positives = 116/230 (50%)
Query: 127 EAIHTHAYQYIVESLGLDELEIF-NAYHEIKSIRDKDEFLIPFIDVLTDLKFKTG---NT 182
EA + +Q +E++ + + Y + K +DK L I+ + +K K
Sbjct: 100 EARCFYGFQIAIENIHSETYSLLIETYIKDKQTKDK---LFNAIETIPCIKKKAEWALRW 156
Query: 183 KNDQ-KLLKSLIVFACIMEGLFFYVGFVQILALGRQNKMIGSSELYQYILRDESMHCNFG 241
ND + L+ FA + EG+FF F I L ++ M G + + I RDE +HC+F
Sbjct: 157 INDSDSFAERLVAFAAV-EGIFFSGSFCSIFWLKKRGLMQGLTFSNELISRDEGLHCDFA 215
Query: 242 IDLINTIKME-NPNLWTTEFCKEIEQLFLKAIELEYYYAEDTMPKGILGLNVKTFKSYLR 300
L ++ + +P K IE++ A+E E + +++P ++G+N ++ Y+
Sbjct: 216 CLLYTKLQRKLDP--------KVIEKMIRDAVECEKEFICESLPVDLIGMNSRSMSQYIE 267
Query: 301 FIANCRMKQIGIKQIFPYERNPFPWMSEMIHIKKESNFFETRVMEYQSGG 350
F A+ + +G K+IF NPF WM EMI ++++SNFFE +V EY G
Sbjct: 268 FCADRLVVSLGYKKIFN-SSNPFEWM-EMISLQRKSNFFEGKVAEYAKTG 315
Score = 229 (85.7 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 65/229 (28%), Positives = 107/229 (46%)
Query: 18 ERINKIN---KQIINGHTDVNQLVPFKYNWAWDRYLSSCANHWMPQEINMQRDIELWKNP 74
E INK + + I+ + D L P KY W Y + A+HW+ +EI++ D W+
Sbjct: 2 EEINKKDTFIEPILKENKDRFVLFPIKYPDIWRMYKKALASHWVAEEIDLGNDNVDWEYK 61
Query: 75 IGLTEEERRLVKRNLGFFSTADSLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAY 134
LT+ ER + L FF+ +D + N+ + PE R + Q E IH+ Y
Sbjct: 62 --LTDNERHFISHVLAFFAASDGIVNENLATRFMSEVQIPEARCFYGFQIAIENIHSETY 119
Query: 135 QYIVESLGLDEL---EIFNAYHEIKSIRDKDEFLIPFIDVLTDLKFKTGNTKNDQKLLKS 191
++E+ D+ ++FNA I I+ K E+ + +I+ + +
Sbjct: 120 SLLIETYIKDKQTKDKLFNAIETIPCIKKKAEWALRWIN-------------DSDSFAER 166
Query: 192 LIVFACIMEGLFFYVGFVQILALGRQNKMIGSSELYQYILRDESMHCNF 240
L+ FA + EG+FF F I L ++ M G + + I RDE +HC+F
Sbjct: 167 LVAFAAV-EGIFFSGSFCSIFWLKKRGLMQGLTFSNELISRDEGLHCDF 214
>GENEDB_PFALCIPARUM|PF14_0053 [details] [associations]
symbol:PF14_0053 "ribonucleotide reductase
small subunit" species:5833 "Plasmodium falciparum" [GO:0006260
"DNA replication" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR000358 InterPro:IPR009078
InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368 GO:GO:0006260
GO:GO:0046914 EMBL:AE014187 SUPFAM:SSF47240 KO:K10808
Gene3D:1.10.620.20 GO:GO:0005971 GO:GO:0004748 GO:GO:0009186
HOGENOM:HOG000255975 PANTHER:PTHR23409 OMA:ICNRRCQ
ProtClustDB:PTZ00211 HSSP:P11157 RefSeq:XP_001348226.1
ProteinModelPortal:Q8IM38 SMR:Q8IM38 PRIDE:Q8IM38
EnsemblProtists:PF14_0053:mRNA GeneID:811635 KEGG:pfa:PF14_0053
EuPathDB:PlasmoDB:PF3D7_1405600 Uniprot:Q8IM38
Length = 349
Score = 234 (87.4 bits), Expect = 2.6e-18, P = 2.6e-18
Identities = 65/251 (25%), Positives = 116/251 (46%)
Query: 22 KINKQIINGHTDVNQLVPFKYNWAWDRYLSSCANHWMPQEINMQRDIELWKNPIGLTEEE 81
+IN++I+N +D L P Y WD Y + A+ W +EI++ D++ ++ L E E
Sbjct: 28 EINEKILNKESDRFTLYPILYPDVWDFYKKAEASFWTAEEIDLSSDLKDFEK---LNENE 84
Query: 82 RRLVKRNLGFFSTADSLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIVESL 141
+ +K L FF+ +D + N+ R + E +++ Q E IH+ Y ++++
Sbjct: 85 KHFIKHVLAFFAASDGIVLENLASKFLREVQITEAKKFYSFQIAVENIHSETYSLLIDNY 144
Query: 142 GLDELEIFNAYHEIKSIRDKDEFLIPFIDVLTDLKFKTGNTKNDQKLLKSLIVFACIMEG 201
DE E N +H I++I P + K N N + ++ AC+ EG
Sbjct: 145 IKDEKERLNLFHAIENI--------PAVKNKALWAAKWINDTNS--FAERIVANACV-EG 193
Query: 202 LFFYVGFVQILALGRQNKMIGSSELYQYILRDESMHCNFGIDLINTIKMENPNLWTTEFC 261
+ F F I +QNK+ G + + I RDE +H +F + + + + P
Sbjct: 194 ILFSGSFCAIFWFKKQNKLHGLTFSNELISRDEGLHTDFNCLIYSLLDNKLPEQMVQNIV 253
Query: 262 KE---IEQLFL 269
KE +E+ F+
Sbjct: 254 KEAVEVERSFI 264
Score = 220 (82.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 64/241 (26%), Positives = 121/241 (50%)
Query: 118 QYLLRQAFEEAIHTHAYQYIVESLGLDELEIFNAYHEIKSIRDKDEFLIPF--IDVLTDL 175
++L EA +++Q VE++ E ++ + I+D+ E L F I+ + +
Sbjct: 109 KFLREVQITEAKKFYSFQIAVENI---HSETYSLLID-NYIKDEKERLNLFHAIENIPAV 164
Query: 176 KFKT---GNTKND-QKLLKSLIVFACIMEGLFFYVGFVQILALGRQNKMIGSSELYQYIL 231
K K ND + ++ AC+ EG+ F F I +QNK+ G + + I
Sbjct: 165 KNKALWAAKWINDTNSFAERIVANACV-EGILFSGSFCAIFWFKKQNKLHGLTFSNELIS 223
Query: 232 RDESMHCNFGIDLINTIKMENPNLWTTEFCKEIEQLFLKAIELEYYYAEDTMPKGILGLN 291
RDE +H +F + + + + P KE A+E+E + +++P ++G+N
Sbjct: 224 RDEGLHTDFNCLIYSLLDNKLPEQMVQNIVKE-------AVEVERSFICESLPCDLIGMN 276
Query: 292 VKTFKSYLRFIANCRMKQIGIKQIFPYERNPFPWMSEMIHIKKESNFFETRVMEYQSGGT 351
+ Y+ F+A+ ++ +G +IF + +NPF WM ++I ++ ++NFFE RV +YQ G
Sbjct: 277 SRLMSQYIEFVADRLLECLGCSKIF-HSKNPFNWM-DLISLQGKTNFFEKRVADYQKSGV 334
Query: 352 L 352
+
Sbjct: 335 M 335
>UNIPROTKB|Q8IM38 [details] [associations]
symbol:PF14_0053 "Ribonucleotide reductase small subunit"
species:36329 "Plasmodium falciparum 3D7" [GO:0005575
"cellular_component" evidence=ND] [GO:0006260 "DNA replication"
evidence=ISS] InterPro:IPR000358 InterPro:IPR009078
InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368 GO:GO:0006260
GO:GO:0046914 EMBL:AE014187 SUPFAM:SSF47240 KO:K10808
Gene3D:1.10.620.20 GO:GO:0005971 GO:GO:0004748 GO:GO:0009186
HOGENOM:HOG000255975 PANTHER:PTHR23409 OMA:ICNRRCQ
ProtClustDB:PTZ00211 HSSP:P11157 RefSeq:XP_001348226.1
ProteinModelPortal:Q8IM38 SMR:Q8IM38 PRIDE:Q8IM38
EnsemblProtists:PF14_0053:mRNA GeneID:811635 KEGG:pfa:PF14_0053
EuPathDB:PlasmoDB:PF3D7_1405600 Uniprot:Q8IM38
Length = 349
Score = 234 (87.4 bits), Expect = 2.6e-18, P = 2.6e-18
Identities = 65/251 (25%), Positives = 116/251 (46%)
Query: 22 KINKQIINGHTDVNQLVPFKYNWAWDRYLSSCANHWMPQEINMQRDIELWKNPIGLTEEE 81
+IN++I+N +D L P Y WD Y + A+ W +EI++ D++ ++ L E E
Sbjct: 28 EINEKILNKESDRFTLYPILYPDVWDFYKKAEASFWTAEEIDLSSDLKDFEK---LNENE 84
Query: 82 RRLVKRNLGFFSTADSLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIVESL 141
+ +K L FF+ +D + N+ R + E +++ Q E IH+ Y ++++
Sbjct: 85 KHFIKHVLAFFAASDGIVLENLASKFLREVQITEAKKFYSFQIAVENIHSETYSLLIDNY 144
Query: 142 GLDELEIFNAYHEIKSIRDKDEFLIPFIDVLTDLKFKTGNTKNDQKLLKSLIVFACIMEG 201
DE E N +H I++I P + K N N + ++ AC+ EG
Sbjct: 145 IKDEKERLNLFHAIENI--------PAVKNKALWAAKWINDTNS--FAERIVANACV-EG 193
Query: 202 LFFYVGFVQILALGRQNKMIGSSELYQYILRDESMHCNFGIDLINTIKMENPNLWTTEFC 261
+ F F I +QNK+ G + + I RDE +H +F + + + + P
Sbjct: 194 ILFSGSFCAIFWFKKQNKLHGLTFSNELISRDEGLHTDFNCLIYSLLDNKLPEQMVQNIV 253
Query: 262 KE---IEQLFL 269
KE +E+ F+
Sbjct: 254 KEAVEVERSFI 264
Score = 220 (82.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 64/241 (26%), Positives = 121/241 (50%)
Query: 118 QYLLRQAFEEAIHTHAYQYIVESLGLDELEIFNAYHEIKSIRDKDEFLIPF--IDVLTDL 175
++L EA +++Q VE++ E ++ + I+D+ E L F I+ + +
Sbjct: 109 KFLREVQITEAKKFYSFQIAVENI---HSETYSLLID-NYIKDEKERLNLFHAIENIPAV 164
Query: 176 KFKT---GNTKND-QKLLKSLIVFACIMEGLFFYVGFVQILALGRQNKMIGSSELYQYIL 231
K K ND + ++ AC+ EG+ F F I +QNK+ G + + I
Sbjct: 165 KNKALWAAKWINDTNSFAERIVANACV-EGILFSGSFCAIFWFKKQNKLHGLTFSNELIS 223
Query: 232 RDESMHCNFGIDLINTIKMENPNLWTTEFCKEIEQLFLKAIELEYYYAEDTMPKGILGLN 291
RDE +H +F + + + + P KE A+E+E + +++P ++G+N
Sbjct: 224 RDEGLHTDFNCLIYSLLDNKLPEQMVQNIVKE-------AVEVERSFICESLPCDLIGMN 276
Query: 292 VKTFKSYLRFIANCRMKQIGIKQIFPYERNPFPWMSEMIHIKKESNFFETRVMEYQSGGT 351
+ Y+ F+A+ ++ +G +IF + +NPF WM ++I ++ ++NFFE RV +YQ G
Sbjct: 277 SRLMSQYIEFVADRLLECLGCSKIF-HSKNPFNWM-DLISLQGKTNFFEKRVADYQKSGV 334
Query: 352 L 352
+
Sbjct: 335 M 335
>TAIR|locus:2088040 [details] [associations]
symbol:RNR2A "ribonucleotide reductase 2A" species:3702
"Arabidopsis thaliana" [GO:0004748 "ribonucleoside-diphosphate
reductase activity, thioredoxin disulfide as acceptor"
evidence=IEA;ISS;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0009186 "deoxyribonucleoside diphosphate metabolic process"
evidence=IEA;ISS] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0046914 "transition metal ion binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0005971 "ribonucleoside-diphosphate reductase
complex" evidence=ISS] [GO:0009259 "ribonucleotide metabolic
process" evidence=TAS] [GO:0006281 "DNA repair" evidence=TAS]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0051726 "regulation of cell cycle" evidence=IMP] [GO:0005829
"cytosol" evidence=IDA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] InterPro:IPR000358
InterPro:IPR009078 InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368
UniPathway:UPA00326 GO:GO:0007275 GO:GO:0005829 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006260 GO:GO:0006281 GO:GO:0046914
GO:GO:0051726 EMBL:AB023036 SUPFAM:SSF47240 KO:K10808
UniGene:At.8049 Gene3D:1.10.620.20 GO:GO:0005971 GO:GO:0004748
GO:GO:0009186 EMBL:X77336 EMBL:AF372971 EMBL:AY143893
IPI:IPI00532435 PIR:S68538 RefSeq:NP_189000.1
ProteinModelPortal:P50651 SMR:P50651 STRING:P50651 PaxDb:P50651
PRIDE:P50651 EnsemblPlants:AT3G23580.1 GeneID:821937
KEGG:ath:AT3G23580 GeneFarm:2083 TAIR:At3g23580 eggNOG:COG0208
HOGENOM:HOG000255975 InParanoid:P50651 OMA:ELEIEWA PhylomeDB:P50651
ProtClustDB:PLN02492 Genevestigator:P50651 GermOnline:AT3G23580
GO:GO:0009259 PANTHER:PTHR23409 Uniprot:P50651
Length = 341
Score = 232 (86.7 bits), Expect = 4.0e-18, P = 4.0e-18
Identities = 58/220 (26%), Positives = 103/220 (46%)
Query: 37 LVPFKYNWAWDRYLSSCANHWMPQEINMQRDIELWKNPIGLTEEERRLVKRNLGFFSTAD 96
+ P +Y W+ Y + A+ W +E+++ D++ W+ LT+ E+ + L FF+ +D
Sbjct: 31 MFPIRYKSIWEMYKKAEASFWTAEEVDLSTDVQQWE---ALTDSEKHFISHILAFFAASD 87
Query: 97 SLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIVESLGLDELE---IFNAYH 153
+ N+ + PE R + Q E IH+ Y ++E+ D E +FNA
Sbjct: 88 GIVLENLAARFLNDVQVPEARAFYGFQIAMENIHSEMYSLLLETFIKDSKEKDRLFNAIE 147
Query: 154 EIKSIRDKDEFLIPFIDVLTDLKFKTGNTKNDQKLLKSLIVFACIMEGLFFYVGFVQILA 213
I I K ++ + +I + + F L+ FAC+ EG+FF F I
Sbjct: 148 TIPCISKKAKWCLDWIQ--SPMSFAV-----------RLVAFACV-EGIFFSGSFCAIFW 193
Query: 214 LGRQNKMIGSSELYQYILRDESMHCNFGIDLINTIKMENP 253
L ++ M G + + I RDE +HC+F L + ++ + P
Sbjct: 194 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLQKQLP 233
Score = 224 (83.9 bits), Expect = 5.7e-17, P = 5.7e-17
Identities = 63/231 (27%), Positives = 117/231 (50%)
Query: 127 EAIHTHAYQYIVESLGLDELEIFNAYHE--IKSIRDKDEFL--IPFIDVLTD-LKFKTGN 181
EA + +Q +E++ E+++ E IK ++KD I I ++ K+
Sbjct: 106 EARAFYGFQIAMENI---HSEMYSLLLETFIKDSKEKDRLFNAIETIPCISKKAKWCLDW 162
Query: 182 TKNDQKLLKSLIVFACIMEGLFFYVGFVQILALGRQNKMIGSSELYQYILRDESMHCNFG 241
++ L+ FAC+ EG+FF F I L ++ M G + + I RDE +HC+F
Sbjct: 163 IQSPMSFAVRLVAFACV-EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFA 221
Query: 242 IDLINTIKMENPNLWTTEFCKEIEQLFLKAIELEYYYAEDTMPKGILGLNVKTFKSYLRF 301
L + ++ + P +++ Q+ +A+E+E + +P ++G+N Y++F
Sbjct: 222 CLLYSLLQKQLP-------LEKVYQIVHEAVEIETEFVCKALPCDLIGMNSNLMSQYIQF 274
Query: 302 IANCRMKQIGIKQIFPYERNPFPWMSEMIHIKKESNFFETRVMEYQSGGTL 352
+A+ + +G ++ + E NPF WM E I ++ ++NFFE RV EYQ +
Sbjct: 275 VADRLLVTLGCERTYKAE-NPFDWM-EFISLQGKTNFFEKRVGEYQKASVM 323
>ZFIN|ZDB-GENE-030616-614 [details] [associations]
symbol:rrm2b "ribonucleotide reductase M2 b"
species:7955 "Danio rerio" [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0005971 "ribonucleoside-diphosphate reductase
complex" evidence=IEA] [GO:0046914 "transition metal ion binding"
evidence=IEA] [GO:0009186 "deoxyribonucleoside diphosphate
metabolic process" evidence=IEA] [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006974 "response to DNA damage stimulus"
evidence=IDA] InterPro:IPR000358 InterPro:IPR009078
InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368
ZFIN:ZDB-GENE-030616-614 GO:GO:0005737 GO:GO:0046914 GO:GO:0006974
SUPFAM:SSF47240 Gene3D:1.10.620.20 GO:GO:0005971 GO:GO:0004748
GO:GO:0009186 PANTHER:PTHR23409 CTD:50484 HOVERGEN:HBG001647
GeneTree:ENSGT00390000013305 OMA:CLMFHYL EMBL:AL807244
IPI:IPI00505831 RefSeq:NP_001007164.1 UniGene:Dr.51831 SMR:Q7ZYW0
Ensembl:ENSDART00000050750 Ensembl:ENSDART00000141404 GeneID:368909
KEGG:dre:368909 InParanoid:Q7ZYW0 NextBio:20813259 Uniprot:Q7ZYW0
Length = 349
Score = 232 (86.7 bits), Expect = 5.3e-18, P = 5.3e-18
Identities = 61/232 (26%), Positives = 119/232 (51%)
Query: 127 EAIHTHAYQYIVESLGLDELE-IFNAYHEIKSIRDKDEFLIPFIDVLTDLKFKTG----- 180
EA + +Q ++E++ + + N Y I+ ++++D +L + + ++ K
Sbjct: 117 EARSFYGFQILIENVHSEMYSMLINTY--IRDLKERD-YLFNAVQTMPCVRRKADWALQW 173
Query: 181 NTKNDQKLLKSLIVFACIMEGLFFYVGFVQILALGRQNKMIGSSELYQYILRDESMHCNF 240
+ + + L+ FA + EG+FF F I L ++ M G + + I RDE +HCNF
Sbjct: 174 ISDTNSTFGERLVAFAAV-EGIFFSGSFAAIYWLKKRGLMPGLTYSNELISRDEGLHCNF 232
Query: 241 GIDLINTIKMENPNLWTTEFCKEIEQLFLKAIELEYYYAEDTMPKGILGLNVKTFKSYLR 300
LI + ++ P++ + + KA+ +E + + +P ++G+N K Y+
Sbjct: 233 AC-LIYSYLVKKPSV------DRVNDIIAKAVSIEQEFLTEALPVNLIGMNCSLMKQYIE 285
Query: 301 FIANCRMKQIGIKQIFPYERNPFPWMSEMIHIKKESNFFETRVMEYQSGGTL 352
F+A+ + +G+ + + E NPF +M E I ++ ++NFFE RV EYQ G +
Sbjct: 286 FVADRLLTDLGLPKAYCSE-NPFDFM-ESISLEGKTNFFEKRVAEYQRLGVM 335
Score = 225 (84.3 bits), Expect = 5.2e-17, P = 5.2e-17
Identities = 60/222 (27%), Positives = 108/222 (48%)
Query: 37 LVPFKYNWAWDRYLSSCANHWMPQEINMQRDIELWKNPIGLTEEERRLVKRNLGFFSTAD 96
+ P +Y W Y + A+ W +E+++ +D+ W GL EE+ + L FF+ +D
Sbjct: 42 IFPIQYPDIWKMYKQAQASFWTVEEVDLSKDLTHWD---GLKSEEKHFISHVLAFFAASD 98
Query: 97 SLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIVESLGLDELE---IFNAYH 153
+ N+V + + PE R + Q E +H+ Y ++ + D E +FNA
Sbjct: 99 GIVNENLVQRFSQEVQLPEARSFYGFQILIENVHSEMYSMLINTYIRDLKERDYLFNAVQ 158
Query: 154 EIKSIRDKDEFLIPFIDVLTDLKFKTGNTKNDQKLLKSLIVFACIMEGLFFYVGFVQILA 213
+ +R K ++ + +I +D T +T ++ L+ FA + EG+FF F I
Sbjct: 159 TMPCVRRKADWALQWI---SD----TNSTFGER-----LVAFAAV-EGIFFSGSFAAIYW 205
Query: 214 LGRQNKMIGSSELYQYILRDESMHCNFGIDLINTIKMENPNL 255
L ++ M G + + I RDE +HCNF LI + ++ P++
Sbjct: 206 LKKRGLMPGLTYSNELISRDEGLHCNFAC-LIYSYLVKKPSV 246
>UNIPROTKB|E1BFQ8 [details] [associations]
symbol:RRM2B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0009263 "deoxyribonucleotide biosynthetic
process" evidence=IEA] [GO:0009200 "deoxyribonucleoside
triphosphate metabolic process" evidence=IEA] [GO:0006979 "response
to oxidative stress" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006264 "mitochondrial DNA replication"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=IEA] [GO:0003014 "renal system
process" evidence=IEA] [GO:0001822 "kidney development"
evidence=IEA] [GO:0046914 "transition metal ion binding"
evidence=IEA] [GO:0009186 "deoxyribonucleoside diphosphate
metabolic process" evidence=IEA] [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=IEA]
InterPro:IPR000358 InterPro:IPR009078 InterPro:IPR012348
Pfam:PF00268 PROSITE:PS00368 GO:GO:0005739 GO:GO:0005634
GO:GO:0043066 GO:GO:0006979 GO:GO:0006281 GO:GO:0046914
GO:GO:0001822 GO:GO:0003014 SUPFAM:SSF47240 KO:K10808
Gene3D:1.10.620.20 GO:GO:0006264 GO:GO:0009263 GO:GO:0005971
GO:GO:0004748 GO:GO:0009186 PANTHER:PTHR23409 CTD:50484
GO:GO:0009200 GeneTree:ENSGT00390000013305 OMA:CLMFHYL
EMBL:DAAA02039335 IPI:IPI00693331 RefSeq:XP_002692807.1
RefSeq:XP_607398.4 UniGene:Bt.92170 ProteinModelPortal:E1BFQ8
Ensembl:ENSBTAT00000028260 GeneID:528960 KEGG:bta:528960
NextBio:20874933 Uniprot:E1BFQ8
Length = 351
Score = 231 (86.4 bits), Expect = 7.6e-18, P = 7.6e-18
Identities = 66/228 (28%), Positives = 121/228 (53%)
Query: 127 EAIHTHAYQYIVESLGLDELEIFNAYHEIKSIRD--KDEFLIPFIDVLTDLKFKTGNTKN 184
EA + +Q ++E++ E+++ + IRD K EFL I+ + +K K
Sbjct: 119 EARCFYGFQILIENV---HSEMYSLLIDTY-IRDPKKREFLFNAIETMPYVKKKADWALR 174
Query: 185 ---DQKLL--KSLIVFACIMEGLFFYVGFVQILALGRQNKMIGSSELYQYILRDESMHCN 239
D+K + ++ FA + EG+FF F I L ++ M G + + I RDE +HC+
Sbjct: 175 WIADRKSTFGERVVAFAAV-EGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCD 233
Query: 240 FGIDLINTIKMENPNLWTTEFCKEIEQLFLKAIELEYYYAEDTMPKGILGLNVKTFKSYL 299
F + + + P+ E + + ++ + A+E+E + + +P G++G+N K Y+
Sbjct: 234 FACLMFQYL-VNKPS----E--ERVREIIVNAVEIEQEFLTEALPVGLIGMNCVLMKQYI 286
Query: 300 RFIANCRMKQIGIKQIFPYERNPFPWMSEMIHIKKESNFFETRVMEYQ 347
F+A+ + ++G ++F E NPF +M E I ++ ++NFFE RV EYQ
Sbjct: 287 EFVADRLLTELGFSKVFQAE-NPFDFM-ENISLEGKTNFFEKRVSEYQ 332
Score = 198 (74.8 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 52/207 (25%), Positives = 97/207 (46%)
Query: 37 LVPFKYNWAWDRYLSSCANHWMPQEINMQRDIELWKNPIGLTEEERRLVKRNLGFFSTAD 96
+ P +Y W Y + A+ W +E+++ +D+ W L EE+ + L FF+ +D
Sbjct: 44 IFPIQYPDIWKMYKKAQASFWTAEEVDLSKDLPHWNK---LKSEEKYFISHILAFFAASD 100
Query: 97 SLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIVESLGLDELE---IFNAYH 153
+ N+V + + PE R + Q E +H+ Y ++++ D + +FNA
Sbjct: 101 GIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIE 160
Query: 154 EIKSIRDKDEFLIPFIDVLTDLKFKTGNTKNDQKLLKSLIVFACIMEGLFFYVGFVQILA 213
+ ++ K ++ + +I D K G + ++ FA + EG+FF F I
Sbjct: 161 TMPYVKKKADWALRWI---ADRKSTFG---------ERVVAFAAV-EGIFFSGSFAAIFW 207
Query: 214 LGRQNKMIGSSELYQYILRDESMHCNF 240
L ++ M G + + I RDE +HC+F
Sbjct: 208 LKKRGLMPGLTFSNELISRDEGLHCDF 234
>CGD|CAL0001735 [details] [associations]
symbol:RNR22 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000358
InterPro:IPR009078 InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368
CGD:CAL0001735 GO:GO:0046914 SUPFAM:SSF47240 Gene3D:1.10.620.20
EMBL:AACQ01000133 EMBL:AACQ01000132 GO:GO:0005971 GO:GO:0004748
GO:GO:0009186 eggNOG:COG0208 HOGENOM:HOG000255975 PANTHER:PTHR23409
RefSeq:XP_713125.1 RefSeq:XP_713171.1 ProteinModelPortal:Q59U83
SMR:Q59U83 STRING:Q59U83 GeneID:3645171 GeneID:3645217
KEGG:cal:CaO19.1868 KEGG:cal:CaO19.9424 Uniprot:Q59U83
Length = 394
Score = 233 (87.1 bits), Expect = 9.2e-18, P = 9.2e-18
Identities = 69/257 (26%), Positives = 117/257 (45%)
Query: 24 NKQIINGHTDVNQLVPFKYNWAWDRYLSSCANHWMPQEINMQRDIELWKNPIGLTEEERR 83
N+ ++ + + P KY W Y S A+ W +E+++ +D++ W N + E ER
Sbjct: 70 NEPLLTPDKTRHTIYPIKYPELWQFYKKSLASFWTAEELDLSKDLDDWNNK--MNENERF 127
Query: 84 LVKRNLGFFSTADSLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIVESLGL 143
+ R L FF+ +D + N+V + PE + Q E IH+ Y ++E+
Sbjct: 128 FISRVLAFFAASDGIVNENLVENFCAEVQIPEAKSVYKFQIMMENIHSETYSLLIETYFK 187
Query: 144 DELE---IFNAYHEIKSIRDKDEFLIPFIDVLTDLKFKTGNTKNDQKLLKSLIVFACIME 200
D E +FNA I IR K ++ I +I D + L+ FA + E
Sbjct: 188 DPEEADFLFNAIDNIPFIRKKADWAIRWIQ------------SEDALYAERLVAFAAV-E 234
Query: 201 GLFFYVGFVQILALGRQNKMIGSSELYQYILRDESMHCNFGIDLINTIKMENPNLWTTEF 260
G+FF F I L ++ M G + + I RDE +H ++ L + +K P+ +E
Sbjct: 235 GIFFSGSFAAIFWLKKRGLMPGLTFSNELICRDEGIHTDYACLLFSYLK-NKPS---SEI 290
Query: 261 CKEIEQLFLKAIELEYY 277
++I + IE EY+
Sbjct: 291 IEKIITEAVD-IEKEYF 306
Score = 210 (79.0 bits), Expect = 7.7e-15, P = 7.7e-15
Identities = 57/188 (30%), Positives = 97/188 (51%)
Query: 166 IPFIDVLTDLKFKTGNTKNDQKLLKSLIVFACIMEGLFFYVGFVQILALGRQNKMIGSSE 225
IPFI D + ++ D + L+ FA + EG+FF F I L ++ M G +
Sbjct: 202 IPFIRKKADWAIRWIQSE-DALYAERLVAFAAV-EGIFFSGSFAAIFWLKKRGLMPGLTF 259
Query: 226 LYQYILRDESMHCNFGIDLINTIKMENPNLWTTEFCKEIEQLFLKAIELEYYYAEDTMPK 285
+ I RDE +H ++ L + +K P+ +E IE++ +A+++E Y D +P
Sbjct: 260 SNELICRDEGIHTDYACLLFSYLK-NKPS---SEI---IEKIITEAVDIEKEYFSDALPV 312
Query: 286 GILGLNVKTFKSYLRFIANCRMKQIGIKQIFPYERNPFPWMSEMIHIKKESNFFETRVME 345
+LG+N Y+ F+A+ + G K+ + NPF +M E I + ++NFFE RV +
Sbjct: 313 SLLGMNCDLMCQYVEFVADRLLVAFGNKKYYNVT-NPFDFM-ENISLAGKTNFFEKRVSD 370
Query: 346 YQSGGTLD 353
YQ G ++
Sbjct: 371 YQKAGVME 378
>UNIPROTKB|Q59U83 [details] [associations]
symbol:RNR22 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000358
InterPro:IPR009078 InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368
CGD:CAL0001735 GO:GO:0046914 SUPFAM:SSF47240 Gene3D:1.10.620.20
EMBL:AACQ01000133 EMBL:AACQ01000132 GO:GO:0005971 GO:GO:0004748
GO:GO:0009186 eggNOG:COG0208 HOGENOM:HOG000255975 PANTHER:PTHR23409
RefSeq:XP_713125.1 RefSeq:XP_713171.1 ProteinModelPortal:Q59U83
SMR:Q59U83 STRING:Q59U83 GeneID:3645171 GeneID:3645217
KEGG:cal:CaO19.1868 KEGG:cal:CaO19.9424 Uniprot:Q59U83
Length = 394
Score = 233 (87.1 bits), Expect = 9.2e-18, P = 9.2e-18
Identities = 69/257 (26%), Positives = 117/257 (45%)
Query: 24 NKQIINGHTDVNQLVPFKYNWAWDRYLSSCANHWMPQEINMQRDIELWKNPIGLTEEERR 83
N+ ++ + + P KY W Y S A+ W +E+++ +D++ W N + E ER
Sbjct: 70 NEPLLTPDKTRHTIYPIKYPELWQFYKKSLASFWTAEELDLSKDLDDWNNK--MNENERF 127
Query: 84 LVKRNLGFFSTADSLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIVESLGL 143
+ R L FF+ +D + N+V + PE + Q E IH+ Y ++E+
Sbjct: 128 FISRVLAFFAASDGIVNENLVENFCAEVQIPEAKSVYKFQIMMENIHSETYSLLIETYFK 187
Query: 144 DELE---IFNAYHEIKSIRDKDEFLIPFIDVLTDLKFKTGNTKNDQKLLKSLIVFACIME 200
D E +FNA I IR K ++ I +I D + L+ FA + E
Sbjct: 188 DPEEADFLFNAIDNIPFIRKKADWAIRWIQ------------SEDALYAERLVAFAAV-E 234
Query: 201 GLFFYVGFVQILALGRQNKMIGSSELYQYILRDESMHCNFGIDLINTIKMENPNLWTTEF 260
G+FF F I L ++ M G + + I RDE +H ++ L + +K P+ +E
Sbjct: 235 GIFFSGSFAAIFWLKKRGLMPGLTFSNELICRDEGIHTDYACLLFSYLK-NKPS---SEI 290
Query: 261 CKEIEQLFLKAIELEYY 277
++I + IE EY+
Sbjct: 291 IEKIITEAVD-IEKEYF 306
Score = 210 (79.0 bits), Expect = 7.7e-15, P = 7.7e-15
Identities = 57/188 (30%), Positives = 97/188 (51%)
Query: 166 IPFIDVLTDLKFKTGNTKNDQKLLKSLIVFACIMEGLFFYVGFVQILALGRQNKMIGSSE 225
IPFI D + ++ D + L+ FA + EG+FF F I L ++ M G +
Sbjct: 202 IPFIRKKADWAIRWIQSE-DALYAERLVAFAAV-EGIFFSGSFAAIFWLKKRGLMPGLTF 259
Query: 226 LYQYILRDESMHCNFGIDLINTIKMENPNLWTTEFCKEIEQLFLKAIELEYYYAEDTMPK 285
+ I RDE +H ++ L + +K P+ +E IE++ +A+++E Y D +P
Sbjct: 260 SNELICRDEGIHTDYACLLFSYLK-NKPS---SEI---IEKIITEAVDIEKEYFSDALPV 312
Query: 286 GILGLNVKTFKSYLRFIANCRMKQIGIKQIFPYERNPFPWMSEMIHIKKESNFFETRVME 345
+LG+N Y+ F+A+ + G K+ + NPF +M E I + ++NFFE RV +
Sbjct: 313 SLLGMNCDLMCQYVEFVADRLLVAFGNKKYYNVT-NPFDFM-ENISLAGKTNFFEKRVSD 370
Query: 346 YQSGGTLD 353
YQ G ++
Sbjct: 371 YQKAGVME 378
>UNIPROTKB|F1P0T9 [details] [associations]
symbol:RRM2B "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005971 "ribonucleoside-diphosphate reductase complex"
evidence=IEA] [GO:0009186 "deoxyribonucleoside diphosphate
metabolic process" evidence=IEA] [GO:0046914 "transition metal ion
binding" evidence=IEA] [GO:0001822 "kidney development"
evidence=IEA] [GO:0003014 "renal system process" evidence=IEA]
[GO:0004748 "ribonucleoside-diphosphate reductase activity,
thioredoxin disulfide as acceptor" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006264 "mitochondrial DNA replication"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006979
"response to oxidative stress" evidence=IEA] [GO:0009200
"deoxyribonucleoside triphosphate metabolic process" evidence=IEA]
[GO:0009263 "deoxyribonucleotide biosynthetic process"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] InterPro:IPR000358 InterPro:IPR009078
InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368 GO:GO:0005739
GO:GO:0005634 GO:GO:0043066 GO:GO:0006979 GO:GO:0006281
GO:GO:0046914 SUPFAM:SSF47240 Gene3D:1.10.620.20 GO:GO:0006264
GO:GO:0009263 GO:GO:0005971 GO:GO:0004748 GO:GO:0009186
PANTHER:PTHR23409 GO:GO:0009200 GeneTree:ENSGT00390000013305
OMA:CLMFHYL EMBL:AADN02023141 EMBL:AADN02023142 EMBL:AADN02023143
EMBL:AADN02023144 EMBL:AADN02023145 IPI:IPI00591476
Ensembl:ENSGALT00000025855 Uniprot:F1P0T9
Length = 326
Score = 227 (85.0 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 63/227 (27%), Positives = 121/227 (53%)
Query: 127 EAIHTHAYQYIVESLGLDELEIF-NAYHEIKSIRDKDEFLIPFIDVLTDLKFKTG---NT 182
EA + +Q ++E++ + + + Y IK +K +FL I+ + +K K
Sbjct: 94 EARCFYGFQILIENVHSEMYSLLIDTY--IKD-PEKRDFLFNAIETMPCVKKKADWALKW 150
Query: 183 KNDQKLL--KSLIVFACIMEGLFFYVGFVQILALGRQNKMIGSSELYQYILRDESMHCNF 240
D++ + ++ FA + EG+FF F I L ++ M G + + I RDE +HC+F
Sbjct: 151 IEDRESTFGERVVAFAAV-EGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 209
Query: 241 GIDLINTIKMENPNLWTTEFCKEIEQLFLKAIELEYYYAEDTMPKGILGLNVKTFKSYLR 300
+ + + + P+ E + + ++ + A+E+E + + +P G++G+N K Y+
Sbjct: 210 ACLMFHYL-VNRPS----E--ERVREIIVNAVEIEQEFLTEALPVGLIGMNCTLMKQYIE 262
Query: 301 FIANCRMKQIGIKQIFPYERNPFPWMSEMIHIKKESNFFETRVMEYQ 347
F+A+ + ++G ++F E NPF +M E I ++ ++NFFE RV EYQ
Sbjct: 263 FVADRLLMELGFSKVFHAE-NPFDFM-ENISLEGKTNFFEKRVSEYQ 307
Score = 189 (71.6 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 49/207 (23%), Positives = 98/207 (47%)
Query: 37 LVPFKYNWAWDRYLSSCANHWMPQEINMQRDIELWKNPIGLTEEERRLVKRNLGFFSTAD 96
+ P ++ W Y + A+ W +E+++ +D+ W L +E+ + L FF+ +D
Sbjct: 19 IFPIQHPDIWKMYKQAQASFWTAEEVDLSKDLPHWNK---LKADEKYFISHVLAFFAASD 75
Query: 97 SLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIVESLGLDELE---IFNAYH 153
+ N+V + + PE R + Q E +H+ Y ++++ D + +FNA
Sbjct: 76 GIVNENLVARFSQEVQIPEARCFYGFQILIENVHSEMYSLLIDTYIKDPEKRDFLFNAIE 135
Query: 154 EIKSIRDKDEFLIPFIDVLTDLKFKTGNTKNDQKLLKSLIVFACIMEGLFFYVGFVQILA 213
+ ++ K ++ + +I+ D + G + ++ FA + EG+FF F I
Sbjct: 136 TMPCVKKKADWALKWIE---DRESTFG---------ERVVAFAAV-EGIFFSGSFAAIFW 182
Query: 214 LGRQNKMIGSSELYQYILRDESMHCNF 240
L ++ M G + + I RDE +HC+F
Sbjct: 183 LKKRGLMPGLTFSNELISRDEGLHCDF 209
>UNIPROTKB|E2RQ55 [details] [associations]
symbol:RRM2B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0009263 "deoxyribonucleotide
biosynthetic process" evidence=IEA] [GO:0009200
"deoxyribonucleoside triphosphate metabolic process" evidence=IEA]
[GO:0006979 "response to oxidative stress" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006264 "mitochondrial
DNA replication" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0004748 "ribonucleoside-diphosphate reductase activity,
thioredoxin disulfide as acceptor" evidence=IEA] [GO:0003014 "renal
system process" evidence=IEA] [GO:0001822 "kidney development"
evidence=IEA] [GO:0046914 "transition metal ion binding"
evidence=IEA] [GO:0009186 "deoxyribonucleoside diphosphate
metabolic process" evidence=IEA] [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=IEA]
InterPro:IPR000358 InterPro:IPR009078 InterPro:IPR012348
Pfam:PF00268 PROSITE:PS00368 GO:GO:0005739 GO:GO:0005634
GO:GO:0043066 GO:GO:0006979 GO:GO:0006281 GO:GO:0046914
GO:GO:0001822 GO:GO:0003014 SUPFAM:SSF47240 Gene3D:1.10.620.20
GO:GO:0006264 GO:GO:0009263 GO:GO:0005971 GO:GO:0004748
GO:GO:0009186 PANTHER:PTHR23409 GO:GO:0009200
GeneTree:ENSGT00390000013305 OMA:CLMFHYL EMBL:AAEX03008693
Ensembl:ENSCAFT00000000935 NextBio:20856684 Uniprot:E2RQ55
Length = 440
Score = 231 (86.4 bits), Expect = 2.6e-17, P = 2.6e-17
Identities = 66/228 (28%), Positives = 121/228 (53%)
Query: 127 EAIHTHAYQYIVESLGLDELEIFNAYHEIKSIRD--KDEFLIPFIDVLTDLKFKTG---N 181
EA + +Q ++E++ E+++ + IRD K EFL I+ + +K K
Sbjct: 208 EARCFYGFQILIENV---HSEMYSLLIDTY-IRDPKKREFLFNAIETMPYVKKKADWALR 263
Query: 182 TKNDQKLL--KSLIVFACIMEGLFFYVGFVQILALGRQNKMIGSSELYQYILRDESMHCN 239
D+K + ++ FA + EG+FF F I L ++ M G + + I RDE +HC+
Sbjct: 264 WIEDRKSTFGERVVAFAAV-EGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCD 322
Query: 240 FGIDLINTIKMENPNLWTTEFCKEIEQLFLKAIELEYYYAEDTMPKGILGLNVKTFKSYL 299
F + + + P+ E + + ++ + A+E+E + + +P G++G+N K Y+
Sbjct: 323 FACLMFQYL-VNKPS----E--ERVREIIVNAVEIEQEFLTEALPVGLIGMNCVLMKQYI 375
Query: 300 RFIANCRMKQIGIKQIFPYERNPFPWMSEMIHIKKESNFFETRVMEYQ 347
F+A+ + ++G ++F E NPF +M E I ++ ++NFFE RV EYQ
Sbjct: 376 EFVADRLLVELGFSKVFQAE-NPFDFM-ENISLEGKTNFFEKRVAEYQ 421
Score = 197 (74.4 bits), Expect = 3.7e-13, P = 3.7e-13
Identities = 51/207 (24%), Positives = 98/207 (47%)
Query: 37 LVPFKYNWAWDRYLSSCANHWMPQEINMQRDIELWKNPIGLTEEERRLVKRNLGFFSTAD 96
+ P +Y W Y + A+ W +E+++ +D+ W L +E+ + L FF+ +D
Sbjct: 133 IFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNK---LKSDEKYFISHILAFFAASD 189
Query: 97 SLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIVESLGLDELE---IFNAYH 153
+ N+V + + PE R + Q E +H+ Y ++++ D + +FNA
Sbjct: 190 GIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIE 249
Query: 154 EIKSIRDKDEFLIPFIDVLTDLKFKTGNTKNDQKLLKSLIVFACIMEGLFFYVGFVQILA 213
+ ++ K ++ + +I+ D K G + ++ FA + EG+FF F I
Sbjct: 250 TMPYVKKKADWALRWIE---DRKSTFG---------ERVVAFAAV-EGIFFSGSFAAIFW 296
Query: 214 LGRQNKMIGSSELYQYILRDESMHCNF 240
L ++ M G + + I RDE +HC+F
Sbjct: 297 LKKRGLMPGLTFSNELISRDEGLHCDF 323
>CGD|CAL0002245 [details] [associations]
symbol:RNR21 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005971 "ribonucleoside-diphosphate reductase complex"
evidence=IEA] [GO:0004748 "ribonucleoside-diphosphate reductase
activity, thioredoxin disulfide as acceptor" evidence=IEA]
[GO:0009263 "deoxyribonucleotide biosynthetic process"
evidence=IEA] InterPro:IPR000358 InterPro:IPR009078
InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368 CGD:CAL0002245
GO:GO:0046914 SUPFAM:SSF47240 KO:K10808 Gene3D:1.10.620.20
EMBL:AACQ01000088 EMBL:AACQ01000087 GO:GO:0005971 GO:GO:0004748
GO:GO:0009186 eggNOG:COG0208 HOGENOM:HOG000255975 PANTHER:PTHR23409
RefSeq:XP_715277.1 RefSeq:XP_715342.1 ProteinModelPortal:Q5A0L0
SMR:Q5A0L0 STRING:Q5A0L0 GeneID:3643021 GeneID:3643095
KEGG:cal:CaO19.13223 KEGG:cal:CaO19.5801 Uniprot:Q5A0L0
Length = 413
Score = 230 (86.0 bits), Expect = 2.8e-17, P = 2.8e-17
Identities = 59/208 (28%), Positives = 102/208 (49%)
Query: 37 LVPFKYNWAWDRYLSSCANHWMPQEINMQRDIELWKNPIGLTEEERRLVKRNLGFFSTAD 96
+ P +Y+ W+ Y + A+ W +EI++ +D++ W N L E ER + R L FF+ +D
Sbjct: 102 MFPIRYHEIWNFYKKAEASFWTAEEIDLSKDLDDWNNK--LNENERYFISRVLAFFAASD 159
Query: 97 SLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIVESLGLDELE---IFNAYH 153
+ N++ + PE + + Q E IH+ Y ++E+ D E +FNA
Sbjct: 160 GIVGENLIENFSTEVQLPEAKSFYGFQIMMENIHSETYSLLIETYIKDPQEADYLFNAIA 219
Query: 154 EIKSIRDKDEFLIPFIDVLTDLKFKTGNTKNDQKLL-KSLIVFACIMEGLFFYVGFVQIL 212
I I+ K ++ I +I ++D+ L + L+ FA + EG+FF F I
Sbjct: 220 NIPCIQKKADWAIKWI-------------QDDEALYGERLVAFAAV-EGIFFSGSFASIF 265
Query: 213 ALGRQNKMIGSSELYQYILRDESMHCNF 240
L ++ M G + + I RDE +H +F
Sbjct: 266 WLKKRGLMPGLTFSNELICRDEGLHTDF 293
Score = 209 (78.6 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 64/232 (27%), Positives = 115/232 (49%)
Query: 127 EAIHTHAYQYIVESLGLDELEIFNAYHEIKSIRDKDEFL-----IPFIDVLTDLKFKTGN 181
EA + +Q ++E++ + + + IK ++ D IP I D K
Sbjct: 178 EAKSFYGFQIMMENIHSETYSLLIETY-IKDPQEADYLFNAIANIPCIQKKADWAIKW-- 234
Query: 182 TKNDQKLL-KSLIVFACIMEGLFFYVGFVQILALGRQNKMIGSSELYQYILRDESMHCNF 240
++D+ L + L+ FA + EG+FF F I L ++ M G + + I RDE +H +F
Sbjct: 235 IQDDEALYGERLVAFAAV-EGIFFSGSFASIFWLKKRGLMPGLTFSNELICRDEGLHTDF 293
Query: 241 GIDLINTIKMENPNLWTTEFCKEIEQLFLKAIELEYYYAEDTMPKGILGLNVKTFKSYLR 300
L ++ P+ E +E++ +A+++E Y D +P +LG+N Y+
Sbjct: 294 ACLLFAHLQ-NRPS---PEI---VERIITEAVDVEKEYFTDALPVSLLGMNCNLMCQYIE 346
Query: 301 FIANCRMKQIGIKQIFPYERNPFPWMSEMIHIKKESNFFETRVMEYQSGGTL 352
F+A+ + +G K+++ NPF +M E I + ++NFFE RV +YQ G +
Sbjct: 347 FVADRLLLALGNKKVYNVT-NPFDFM-ENISLAGKTNFFEKRVSDYQKAGVM 396
>UNIPROTKB|F1S0R3 [details] [associations]
symbol:RRM2B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0009263 "deoxyribonucleotide biosynthetic
process" evidence=IEA] [GO:0009200 "deoxyribonucleoside
triphosphate metabolic process" evidence=IEA] [GO:0006979 "response
to oxidative stress" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006264 "mitochondrial DNA replication"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=IEA] [GO:0003014 "renal system
process" evidence=IEA] [GO:0001822 "kidney development"
evidence=IEA] [GO:0046914 "transition metal ion binding"
evidence=IEA] [GO:0009186 "deoxyribonucleoside diphosphate
metabolic process" evidence=IEA] [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=IEA]
InterPro:IPR000358 InterPro:IPR009078 InterPro:IPR012348
Pfam:PF00268 PROSITE:PS00368 GO:GO:0005739 GO:GO:0005634
GO:GO:0043066 GO:GO:0006979 GO:GO:0006281 GO:GO:0046914
GO:GO:0001822 GO:GO:0003014 SUPFAM:SSF47240 Gene3D:1.10.620.20
GO:GO:0006264 GO:GO:0009263 GO:GO:0005971 GO:GO:0004748
GO:GO:0009186 PANTHER:PTHR23409 GO:GO:0009200
GeneTree:ENSGT00390000013305 OMA:CLMFHYL EMBL:CU207279
Ensembl:ENSSSCT00000006647 Uniprot:F1S0R3
Length = 351
Score = 226 (84.6 bits), Expect = 3.8e-17, P = 3.8e-17
Identities = 63/227 (27%), Positives = 119/227 (52%)
Query: 127 EAIHTHAYQYIVESLGLDELEIF-NAYHEIKSIRDKDEFLIPFIDVLTDLKFKTGNTKN- 184
EA + +Q ++E++ + + + Y I+ + + EFL I+ + +K K
Sbjct: 119 EARCFYGFQILIENVHSEMYSLLIDTY--IRDPKQR-EFLFNAIETMPYVKKKADWALRW 175
Query: 185 --DQKLL--KSLIVFACIMEGLFFYVGFVQILALGRQNKMIGSSELYQYILRDESMHCNF 240
D+K + ++ FA + EG+FF F I L ++ M G + + I RDE +HC+F
Sbjct: 176 IADRKATFGERVVAFAAV-EGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 234
Query: 241 GIDLINTIKMENPNLWTTEFCKEIEQLFLKAIELEYYYAEDTMPKGILGLNVKTFKSYLR 300
+ + + P+ E + ++ + A+E+E + + +P G++G+N K Y+
Sbjct: 235 ACLMFQYL-VNKPS----E--ARVREIIVNAVEIEQEFLTEALPVGLIGMNCVLMKQYIE 287
Query: 301 FIANCRMKQIGIKQIFPYERNPFPWMSEMIHIKKESNFFETRVMEYQ 347
F+A+ + ++G ++F E NPF +M E I ++ ++NFFE RV EYQ
Sbjct: 288 FVADRLLTELGFSKVFQAE-NPFDFM-ENISLEGKTNFFEKRVSEYQ 332
Score = 198 (74.8 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 58/239 (24%), Positives = 107/239 (44%)
Query: 37 LVPFKYNWAWDRYLSSCANHWMPQEINMQRDIELWKNPIGLTEEERRLVKRNLGFFSTAD 96
+ P +Y W Y + A+ W +E+++ +D+ W L +E+ + L FF+ +D
Sbjct: 44 IFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNR---LKSDEKYFISHILAFFAASD 100
Query: 97 SLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIVESLGLDELE---IFNAYH 153
+ N+V + + PE R + Q E +H+ Y ++++ D + +FNA
Sbjct: 101 GIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKQREFLFNAIE 160
Query: 154 EIKSIRDKDEFLIPFIDVLTDLKFKTGNTKNDQKLLKSLIVFACIMEGLFFYVGFVQILA 213
+ ++ K ++ + +I D K G + ++ FA + EG+FF F I
Sbjct: 161 TMPYVKKKADWALRWI---ADRKATFG---------ERVVAFAAV-EGIFFSGSFAAIFW 207
Query: 214 LGRQNKMIGSSELYQYILRDESMHCNFGIDLINTIKMENPNLWTTEF---CKEIEQLFL 269
L ++ M G + + I RDE +HC+F + + + E EIEQ FL
Sbjct: 208 LKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEARVREIIVNAVEIEQEFL 266
>ZFIN|ZDB-GENE-990415-25 [details] [associations]
symbol:rrm2 "ribonucleotide reductase M2
polypeptide" species:7955 "Danio rerio" [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0004748 "ribonucleoside-diphosphate reductase
activity, thioredoxin disulfide as acceptor" evidence=IEA]
[GO:0005971 "ribonucleoside-diphosphate reductase complex"
evidence=IEA] [GO:0046914 "transition metal ion binding"
evidence=IEA] [GO:0009186 "deoxyribonucleoside diphosphate
metabolic process" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] InterPro:IPR000358
InterPro:IPR009078 InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368
UniPathway:UPA00326 ZFIN:ZDB-GENE-990415-25 GO:GO:0006260
GO:GO:0046914 SUPFAM:SSF47240 KO:K10808 Gene3D:1.10.620.20
GO:GO:0005971 GO:GO:0004748 GO:GO:0009186 eggNOG:COG0208
HOGENOM:HOG000255975 PANTHER:PTHR23409 HOVERGEN:HBG001647
OrthoDB:EOG4BCDN7 GeneTree:ENSGT00390000013305 OMA:YIADWRL
EMBL:U57965 EMBL:BX248136 EMBL:BC044355 EMBL:BC075746
IPI:IPI00493558 RefSeq:NP_571525.1 RefSeq:XP_002665783.1
UniGene:Dr.75098 ProteinModelPortal:P79733 SMR:P79733 STRING:P79733
PRIDE:P79733 Ensembl:ENSDART00000027851 Ensembl:ENSDART00000112155
GeneID:100330864 GeneID:30733 KEGG:dre:100330864 KEGG:dre:30733
CTD:6241 InParanoid:P79733 NextBio:20807081 Bgee:P79733
Uniprot:P79733
Length = 386
Score = 227 (85.0 bits), Expect = 5.2e-17, P = 5.2e-17
Identities = 64/232 (27%), Positives = 121/232 (52%)
Query: 127 EAIHTHAYQYIVESLGLDELEIF-NAYHEIKSIRDKDEFLIPFIDVLTDLKFKTG---NT 182
EA + +Q +E++ + + + Y IK +++ EFL I+ + +K K N
Sbjct: 154 EARCFYGFQIAMENIHSEMYSLLIDTY--IKDSKER-EFLFNAIETMPCVKKKADWALNW 210
Query: 183 KNDQKLL--KSLIVFACIMEGLFFYVGFVQILALGRQNKMIGSSELYQYILRDESMHCNF 240
D+ + ++ FA + EG+FF F I L ++ M G + + I RDE +HC+F
Sbjct: 211 IGDKNARYGERVVAFAAV-EGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDF 269
Query: 241 GIDLINTIKMENPNLWTTEFCKEIEQLFLKAIELEYYYAEDTMPKGILGLNVKTFKSYLR 300
+ + + P+ T ++++ + A+E+E + D +P ++G+N K Y+
Sbjct: 270 ACLMFKHL-INKPSEET------VKKIIMNAVEIEQEFLTDALPVKLIGMNCDLMKQYIE 322
Query: 301 FIANCRMKQIGIKQIFPYERNPFPWMSEMIHIKKESNFFETRVMEYQSGGTL 352
F+A+ + ++G +++ E NPF +M E I ++ ++NFFE RV EYQ G +
Sbjct: 323 FVADRLLLELGFDKVYRVE-NPFDFM-ENISLEGKTNFFEKRVGEYQRMGVM 372
Score = 209 (78.6 bits), Expect = 9.3e-15, P = 9.3e-15
Identities = 64/248 (25%), Positives = 116/248 (46%)
Query: 29 NGHTDVNQLVPFKYNWAWDRYLSSCANHWMPQEINMQRDIELWKNPIGLTEEERRLVKRN 88
N H V + P +Y+ W Y + A+ W +E+++ +D++ W + L +EER +
Sbjct: 73 NPHRFV--IFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWDS---LKDEERYFISHV 127
Query: 89 LGFFSTADSLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIVESLGLDELE- 147
L FF+ +D + N+V + + E R + Q E IH+ Y ++++ D E
Sbjct: 128 LAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDSKER 187
Query: 148 --IFNAYHEIKSIRDKDEFLIPFIDVLTDLKFKTGNTKNDQKLLKSLIVFACIMEGLFFY 205
+FNA + ++ K ++ + +I D + G + ++ FA + EG+FF
Sbjct: 188 EFLFNAIETMPCVKKKADWALNWIG---DKNARYG---------ERVVAFAAV-EGIFFS 234
Query: 206 VGFVQILALGRQNKMIGSSELYQYILRDESMHCNFGIDLINTIKMENPNLWTTEF----C 261
F I L ++ M G + + I RDE +HC+F + + + P+ T +
Sbjct: 235 GSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHL-INKPSEETVKKIIMNA 293
Query: 262 KEIEQLFL 269
EIEQ FL
Sbjct: 294 VEIEQEFL 301
>UNIPROTKB|D4ADQ1 [details] [associations]
symbol:Rrm2b "Protein Rrm2b" species:10116 "Rattus
norvegicus" [GO:0004748 "ribonucleoside-diphosphate reductase
activity, thioredoxin disulfide as acceptor" evidence=IEA]
[GO:0005971 "ribonucleoside-diphosphate reductase complex"
evidence=IEA] [GO:0009186 "deoxyribonucleoside diphosphate
metabolic process" evidence=IEA] [GO:0046914 "transition metal ion
binding" evidence=IEA] InterPro:IPR000358 InterPro:IPR009078
InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368 GO:GO:0046914
SUPFAM:SSF47240 Gene3D:1.10.620.20 GO:GO:0005971 GO:GO:0004748
GO:GO:0009186 PANTHER:PTHR23409 GeneTree:ENSGT00390000013305
IPI:IPI00360839 PRIDE:D4ADQ1 Ensembl:ENSRNOT00000033704
Uniprot:D4ADQ1
Length = 349
Score = 224 (83.9 bits), Expect = 6.9e-17, P = 6.9e-17
Identities = 66/228 (28%), Positives = 121/228 (53%)
Query: 127 EAIHTHAYQYIVESLGLDELEIFNAYHEIKSIRD--KDEFLIPFIDVLTDLKFKTGNTKN 184
EA + +Q ++E++ E+++ + IRD K EFL I+ + +K K
Sbjct: 117 EARCFYGFQILIENV---HSEMYSLLIDTY-IRDPKKREFLFNAIETMPYVKKKADWALR 172
Query: 185 ---DQKLL--KSLIVFACIMEGLFFYVGFVQILALGRQNKMIGSSELYQYILRDESMHCN 239
D+K + ++ FA + EG+FF F I L ++ M G + + I RDE +HC+
Sbjct: 173 WIADRKSTFGERVVAFAAV-EGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCD 231
Query: 240 FGIDLINTIKMENPNLWTTEFCKEIEQLFLKAIELEYYYAEDTMPKGILGLNVKTFKSYL 299
F + + + P+ E + + ++ + A+++E + + +P G++G+N K Y+
Sbjct: 232 FACLMFQYL-VNKPS----E--ERVMEIIVDAVKIEQEFLTEALPVGLIGMNCVLMKQYI 284
Query: 300 RFIANCRMKQIGIKQIFPYERNPFPWMSEMIHIKKESNFFETRVMEYQ 347
F+A+ + ++G +IF E NPF +M E I ++ ++NFFE RV EYQ
Sbjct: 285 EFVADRLLGELGFSKIFQAE-NPFDFM-ENISLEGKTNFFEKRVSEYQ 330
Score = 149 (57.5 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 50/207 (24%), Positives = 90/207 (43%)
Query: 37 LVPFKYNWAWDRYLSSCANHWMPQEINMQRDIELWKNPIGLTEEERRLVKRNLGFFSTAD 96
+ P +Y W Y + A+ W +E+ RD W+ + L F +D
Sbjct: 44 IFPIQYPDIWKMYKQAQASFWTAEEVWSSRDC--WRTS---RAHSYLFICHVLKRFILSD 98
Query: 97 SLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIVESLGLDELE---IFNAYH 153
+ + NIV + + PE R + Q E +H+ Y ++++ D + +FNA
Sbjct: 99 ACSPQNIVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIE 158
Query: 154 EIKSIRDKDEFLIPFIDVLTDLKFKTGNTKNDQKLLKSLIVFACIMEGLFFYVGFVQILA 213
+ ++ K ++ + +I D K G + ++ FA + EG+FF F I
Sbjct: 159 TMPYVKKKADWALRWI---ADRKSTFG---------ERVVAFAAV-EGIFFSGSFAAIFW 205
Query: 214 LGRQNKMIGSSELYQYILRDESMHCNF 240
L ++ M G + + I RDE +HC+F
Sbjct: 206 LKKRGLMPGLTFSNELISRDEGLHCDF 232
>UNIPROTKB|E1BXP4 [details] [associations]
symbol:RRM2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005971 "ribonucleoside-diphosphate reductase complex"
evidence=IEA] [GO:0009186 "deoxyribonucleoside diphosphate
metabolic process" evidence=IEA] [GO:0046914 "transition metal ion
binding" evidence=IEA] [GO:0004748 "ribonucleoside-diphosphate
reductase activity, thioredoxin disulfide as acceptor"
evidence=IEA] [GO:0009263 "deoxyribonucleotide biosynthetic
process" evidence=IEA] [GO:0051290 "protein heterotetramerization"
evidence=IEA] InterPro:IPR000358 InterPro:IPR009078
InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368 GO:GO:0046914
GO:GO:0051290 SUPFAM:SSF47240 Gene3D:1.10.620.20 GO:GO:0009263
GO:GO:0005971 GO:GO:0004748 GO:GO:0009186 PANTHER:PTHR23409
GeneTree:ENSGT00390000013305 EMBL:AADN02018699 IPI:IPI00683731
Ensembl:ENSGALT00000026525 Uniprot:E1BXP4
Length = 388
Score = 226 (84.6 bits), Expect = 7.1e-17, P = 7.1e-17
Identities = 65/232 (28%), Positives = 122/232 (52%)
Query: 127 EAIHTHAYQYIVESLGLDELEIF-NAYHEIKSIRDKDEFLIPFIDVLTDLKFKTG---NT 182
EA + +Q +E++ + + + Y IK +++ EFL I+ L +K K
Sbjct: 156 EARCFYGFQIAMENIHSEMYSLLIDTY--IKDSKER-EFLFNAIETLPCVKKKADWAIRW 212
Query: 183 KNDQKLL--KSLIVFACIMEGLFFYVGFVQILALGRQNKMIGSSELYQYILRDESMHCNF 240
D+K + ++ FA + EG+FF F I L ++ M G + + I RDE +HC+F
Sbjct: 213 IGDKKATYGERVVAFAAV-EGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDF 271
Query: 241 GIDLINTIKMENPNLWTTEFCKEIEQLFLKAIELEYYYAEDTMPKGILGLNVKTFKSYLR 300
+ + + P+ E + ++++ + A+ +E + + +P ++G+N K Y+
Sbjct: 272 ACLMFKHL-IRKPS----E--ERVKEIIMNAVLIEQEFLTEALPVKLIGMNCTLMKQYIE 324
Query: 301 FIANCRMKQIGIKQIFPYERNPFPWMSEMIHIKKESNFFETRVMEYQSGGTL 352
F+A+ M ++G ++I+ E NPF +M E I ++ ++NFFE RV EYQ G +
Sbjct: 325 FVADRLMLELGFRKIYKVE-NPFDFM-ENISLEGKTNFFEKRVGEYQRMGVM 374
Score = 206 (77.6 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 54/207 (26%), Positives = 100/207 (48%)
Query: 37 LVPFKYNWAWDRYLSSCANHWMPQEINMQRDIELWKNPIGLTEEERRLVKRNLGFFSTAD 96
+ P +Y+ W Y + A+ W +E+++ +D++ W++ L EE+ + L FF+ +D
Sbjct: 81 IFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWES---LKPEEKYFISHVLAFFAASD 137
Query: 97 SLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIVESLGLDELE---IFNAYH 153
+ N+V + + E R + Q E IH+ Y ++++ D E +FNA
Sbjct: 138 GIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDSKEREFLFNAIE 197
Query: 154 EIKSIRDKDEFLIPFIDVLTDLKFKTGNTKNDQKLLKSLIVFACIMEGLFFYVGFVQILA 213
+ ++ K ++ I +I D K G + ++ FA + EG+FF F I
Sbjct: 198 TLPCVKKKADWAIRWIG---DKKATYG---------ERVVAFAAV-EGIFFSGSFASIFW 244
Query: 214 LGRQNKMIGSSELYQYILRDESMHCNF 240
L ++ M G + + I RDE +HC+F
Sbjct: 245 LKKRGLMPGLTFSNELISRDEGLHCDF 271
>RGD|1306045 [details] [associations]
symbol:Rrm2b "ribonucleotide reductase M2 B (TP53 inducible)"
species:10116 "Rattus norvegicus" [GO:0001822 "kidney development"
evidence=ISO] [GO:0003014 "renal system process" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006264
"mitochondrial DNA replication" evidence=ISO] [GO:0006281 "DNA
repair" evidence=ISO] [GO:0006979 "response to oxidative stress"
evidence=ISO] [GO:0009200 "deoxyribonucleoside triphosphate
metabolic process" evidence=ISO] [GO:0009263 "deoxyribonucleotide
biosynthetic process" evidence=ISO] [GO:0014075 "response to amine
stimulus" evidence=IEP] [GO:0043066 "negative regulation of
apoptotic process" evidence=ISO] [GO:0055114 "oxidation-reduction
process" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
REFSEQ:NM_001130543 Ncbi:NP_001124015
Length = 351
Score = 224 (83.9 bits), Expect = 7.2e-17, P = 7.2e-17
Identities = 66/228 (28%), Positives = 121/228 (53%)
Query: 127 EAIHTHAYQYIVESLGLDELEIFNAYHEIKSIRD--KDEFLIPFIDVLTDLKFKTGNTKN 184
EA + +Q ++E++ E+++ + IRD K EFL I+ + +K K
Sbjct: 119 EARCFYGFQILIENV---HSEMYSLLIDTY-IRDPKKREFLFNAIETMPYVKKKADWALR 174
Query: 185 ---DQKLL--KSLIVFACIMEGLFFYVGFVQILALGRQNKMIGSSELYQYILRDESMHCN 239
D+K + ++ FA + EG+FF F I L ++ M G + + I RDE +HC+
Sbjct: 175 WIADRKSTFGERVVAFAAV-EGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCD 233
Query: 240 FGIDLINTIKMENPNLWTTEFCKEIEQLFLKAIELEYYYAEDTMPKGILGLNVKTFKSYL 299
F + + + P+ E + + ++ + A+++E + + +P G++G+N K Y+
Sbjct: 234 FACLMFQYL-VNKPS----E--ERVMEIIVDAVKIEQEFLTEALPVGLIGMNCVLMKQYI 286
Query: 300 RFIANCRMKQIGIKQIFPYERNPFPWMSEMIHIKKESNFFETRVMEYQ 347
F+A+ + ++G +IF E NPF +M E I ++ ++NFFE RV EYQ
Sbjct: 287 EFVADRLLGELGFSKIFQAE-NPFDFM-ENISLEGKTNFFEKRVSEYQ 332
Score = 198 (74.8 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 52/207 (25%), Positives = 97/207 (46%)
Query: 37 LVPFKYNWAWDRYLSSCANHWMPQEINMQRDIELWKNPIGLTEEERRLVKRNLGFFSTAD 96
+ P +Y W Y + A+ W +E+++ +D+ W L EE+ + L FF+ +D
Sbjct: 44 IFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNK---LKSEEKYFISHILAFFAASD 100
Query: 97 SLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIVESLGLDELE---IFNAYH 153
+ N+V + + PE R + Q E +H+ Y ++++ D + +FNA
Sbjct: 101 GIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIE 160
Query: 154 EIKSIRDKDEFLIPFIDVLTDLKFKTGNTKNDQKLLKSLIVFACIMEGLFFYVGFVQILA 213
+ ++ K ++ + +I D K G + ++ FA + EG+FF F I
Sbjct: 161 TMPYVKKKADWALRWI---ADRKSTFG---------ERVVAFAAV-EGIFFSGSFAAIFW 207
Query: 214 LGRQNKMIGSSELYQYILRDESMHCNF 240
L ++ M G + + I RDE +HC+F
Sbjct: 208 LKKRGLMPGLTFSNELISRDEGLHCDF 234
>MGI|MGI:2155865 [details] [associations]
symbol:Rrm2b "ribonucleotide reductase M2 B (TP53
inducible)" species:10090 "Mus musculus" [GO:0001822 "kidney
development" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0004748 "ribonucleoside-diphosphate reductase
activity, thioredoxin disulfide as acceptor" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IC] [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0006264
"mitochondrial DNA replication" evidence=IMP] [GO:0006281 "DNA
repair" evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IMP] [GO:0009186 "deoxyribonucleoside diphosphate
metabolic process" evidence=IEA] [GO:0009200 "deoxyribonucleoside
triphosphate metabolic process" evidence=IMP] [GO:0009263
"deoxyribonucleotide biosynthetic process" evidence=IDA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IMP]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0046914
"transition metal ion binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IDA] InterPro:IPR000358
InterPro:IPR009078 InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368
UniPathway:UPA00326 MGI:MGI:2155865 GO:GO:0005739 GO:GO:0005634
GO:GO:0043066 GO:GO:0006979 GO:GO:0006281 GO:GO:0046914
GO:GO:0001822 GO:GO:0003014 SUPFAM:SSF47240 KO:K10808
Gene3D:1.10.620.20 GO:GO:0006264 GO:GO:0009263 GO:GO:0005971
GO:GO:0004748 GO:GO:0009186 eggNOG:COG0208 HOGENOM:HOG000255975
PANTHER:PTHR23409 CTD:50484 HOVERGEN:HBG001647 OrthoDB:EOG4BCDN7
GO:GO:0009200 EMBL:AK138731 EMBL:BC058103 IPI:IPI00399462
RefSeq:NP_955770.1 UniGene:Mm.24738 ProteinModelPortal:Q6PEE3
SMR:Q6PEE3 STRING:Q6PEE3 PhosphoSite:Q6PEE3 PaxDb:Q6PEE3
PRIDE:Q6PEE3 Ensembl:ENSMUST00000022901 GeneID:382985
KEGG:mmu:382985 UCSC:uc007vnl.1 GeneTree:ENSGT00390000013305
InParanoid:Q6PEE3 OMA:CLMFHYL NextBio:403612 Bgee:Q6PEE3
CleanEx:MM_RRM2B Genevestigator:Q6PEE3
GermOnline:ENSMUSG00000022292 Uniprot:Q6PEE3
Length = 351
Score = 223 (83.6 bits), Expect = 9.7e-17, P = 9.7e-17
Identities = 66/228 (28%), Positives = 119/228 (52%)
Query: 127 EAIHTHAYQYIVESLGLDELEIFNAYHEIKSIRD--KDEFLIPFIDVLTDLKFKTGNTKN 184
EA + +Q ++E++ E+++ + IRD K EFL I+ + +K K
Sbjct: 119 EARCFYGFQILIENV---HSEMYSLLIDTY-IRDPKKREFLFNAIETMPYVKKKADWALR 174
Query: 185 ---DQKLL--KSLIVFACIMEGLFFYVGFVQILALGRQNKMIGSSELYQYILRDESMHCN 239
D+K + ++ FA + EG+FF F I L ++ M G + + I RDE +HC+
Sbjct: 175 WIADRKSTFGERVVAFAAV-EGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCD 233
Query: 240 FGIDLINTIKMENPNLWTTEFCKEIEQLFLKAIELEYYYAEDTMPKGILGLNVKTFKSYL 299
F + + + P+ E + ++ A+++E + + +P G++G+N K Y+
Sbjct: 234 FACLMFQYL-VNKPS----E--DRVREIIADAVQIEQEFLTEALPVGLIGMNCVLMKQYI 286
Query: 300 RFIANCRMKQIGIKQIFPYERNPFPWMSEMIHIKKESNFFETRVMEYQ 347
F+A+ + ++G +IF E NPF +M E I ++ ++NFFE RV EYQ
Sbjct: 287 EFVADRLLGELGFSKIFQAE-NPFDFM-ENISLEGKTNFFEKRVSEYQ 332
Score = 194 (73.4 bits), Expect = 4.3e-13, P = 4.3e-13
Identities = 51/207 (24%), Positives = 97/207 (46%)
Query: 37 LVPFKYNWAWDRYLSSCANHWMPQEINMQRDIELWKNPIGLTEEERRLVKRNLGFFSTAD 96
+ P +Y W Y + A+ W +E+++ +D+ W L +E+ + L FF+ +D
Sbjct: 44 IFPIQYPDIWRMYKQAQASFWTAEEVDLSKDLPHWNK---LKSDEKYFISHILAFFAASD 100
Query: 97 SLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIVESLGLDELE---IFNAYH 153
+ N+V + + PE R + Q E +H+ Y ++++ D + +FNA
Sbjct: 101 GIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIE 160
Query: 154 EIKSIRDKDEFLIPFIDVLTDLKFKTGNTKNDQKLLKSLIVFACIMEGLFFYVGFVQILA 213
+ ++ K ++ + +I D K G + ++ FA + EG+FF F I
Sbjct: 161 TMPYVKKKADWALRWI---ADRKSTFG---------ERVVAFAAV-EGIFFSGSFAAIFW 207
Query: 214 LGRQNKMIGSSELYQYILRDESMHCNF 240
L ++ M G + + I RDE +HC+F
Sbjct: 208 LKKRGLMPGLTFSNELISRDEGLHCDF 234
>UNIPROTKB|Q7LG56 [details] [associations]
symbol:RRM2B "Ribonucleoside-diphosphate reductase subunit
M2 B" species:9606 "Homo sapiens" [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=IEA]
[GO:0009186 "deoxyribonucleoside diphosphate metabolic process"
evidence=IEA] [GO:0046914 "transition metal ion binding"
evidence=IEA] [GO:0004748 "ribonucleoside-diphosphate reductase
activity, thioredoxin disulfide as acceptor" evidence=IEA]
[GO:0001822 "kidney development" evidence=IEA] [GO:0003014 "renal
system process" evidence=IEA] [GO:0006264 "mitochondrial DNA
replication" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006979 "response to oxidative stress" evidence=IEA]
[GO:0009200 "deoxyribonucleoside triphosphate metabolic process"
evidence=IEA] [GO:0009263 "deoxyribonucleotide biosynthetic
process" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0015949 "nucleobase-containing small molecule
interconversion" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] [GO:0055086 "nucleobase-containing
small molecule metabolic process" evidence=TAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] BRENDA:1.17.4.1
Reactome:REACT_111217 InterPro:IPR000358 InterPro:IPR009078
InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368 UniPathway:UPA00326
GO:GO:0005739 GO:GO:0043066 GO:GO:0005654 GO:GO:0006979
GO:GO:0006281 GO:GO:0046914 GO:GO:0001822 GO:GO:0015949
GO:GO:0003014 SUPFAM:SSF47240 KO:K10808 Gene3D:1.10.620.20
GO:GO:0006264 GO:GO:0009263 GO:GO:0005971 GO:GO:0004748
GO:GO:0009186 eggNOG:COG0208 PANTHER:PTHR23409 EMBL:AB036063
EMBL:AB036532 EMBL:AB163437 EMBL:AB163438 EMBL:AB166669
EMBL:AB166670 EMBL:AB166671 EMBL:AK001965 EMBL:AL137348
EMBL:DQ027001 EMBL:AP001328 EMBL:AP002907 EMBL:BC042468
EMBL:BC108261 EMBL:BC117496 EMBL:BC130628 IPI:IPI00100213
IPI:IPI00438859 IPI:IPI00438860 IPI:IPI00735900 IPI:IPI00741117
PIR:T46249 RefSeq:NP_001165948.1 RefSeq:NP_001165949.1
RefSeq:NP_056528.2 UniGene:Hs.512592 PDB:2VUX PDB:3HF1 PDB:4DJN
PDBsum:2VUX PDBsum:3HF1 PDBsum:4DJN ProteinModelPortal:Q7LG56
SMR:Q7LG56 DIP:DIP-24264N DIP:DIP-48627N STRING:Q7LG56
PhosphoSite:Q7LG56 DMDM:74727333 PaxDb:Q7LG56 PRIDE:Q7LG56
DNASU:50484 Ensembl:ENST00000251810 Ensembl:ENST00000395912
Ensembl:ENST00000519317 Ensembl:ENST00000519962
Ensembl:ENST00000522394 GeneID:50484 KEGG:hsa:50484 UCSC:uc003ykn.3
UCSC:uc010mbv.2 UCSC:uc010mbw.1 CTD:50484 GeneCards:GC08M103216
HGNC:HGNC:17296 HPA:CAB006854 HPA:HPA028812 MIM:604712 MIM:612075
MIM:613077 neXtProt:NX_Q7LG56 PharmGKB:PA34866 HOVERGEN:HBG001647
InParanoid:Q7LG56 OrthoDB:EOG4BCDN7 BindingDB:Q7LG56
ChEMBL:CHEMBL1896 ChiTaRS:RRM2B EvolutionaryTrace:Q7LG56
GenomeRNAi:50484 NextBio:53036 ArrayExpress:Q7LG56 Bgee:Q7LG56
Genevestigator:Q7LG56 GermOnline:ENSG00000048392 GO:GO:0009200
Uniprot:Q7LG56
Length = 351
Score = 223 (83.6 bits), Expect = 9.7e-17, P = 9.7e-17
Identities = 65/228 (28%), Positives = 121/228 (53%)
Query: 127 EAIHTHAYQYIVESLGLDELEIFNAYHEIKSIRD--KDEFLIPFIDVLTDLKFKTGNTKN 184
EA + +Q ++E++ E+++ + IRD K EFL I+ + +K K
Sbjct: 119 EARCFYGFQILIENV---HSEMYSLLIDTY-IRDPKKREFLFNAIETMPYVKKKADWALR 174
Query: 185 ---DQKLL--KSLIVFACIMEGLFFYVGFVQILALGRQNKMIGSSELYQYILRDESMHCN 239
D+K + ++ FA + EG+FF F I L ++ M G + + I RDE +HC+
Sbjct: 175 WIADRKSTFGERVVAFAAV-EGVFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCD 233
Query: 240 FGIDLINTIKMENPNLWTTEFCKEIEQLFLKAIELEYYYAEDTMPKGILGLNVKTFKSYL 299
F + + + P+ E + + ++ + A+++E + + +P G++G+N K Y+
Sbjct: 234 FACLMFQYL-VNKPS----E--ERVREIIVDAVKIEQEFLTEALPVGLIGMNCILMKQYI 286
Query: 300 RFIANCRMKQIGIKQIFPYERNPFPWMSEMIHIKKESNFFETRVMEYQ 347
F+A+ + ++G ++F E NPF +M E I ++ ++NFFE RV EYQ
Sbjct: 287 EFVADRLLVELGFSKVFQAE-NPFDFM-ENISLEGKTNFFEKRVSEYQ 332
Score = 193 (73.0 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 51/207 (24%), Positives = 97/207 (46%)
Query: 37 LVPFKYNWAWDRYLSSCANHWMPQEINMQRDIELWKNPIGLTEEERRLVKRNLGFFSTAD 96
+ P +Y W Y + A+ W +E+++ +D+ W L +E+ + L FF+ +D
Sbjct: 44 IFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNK---LKADEKYFISHILAFFAASD 100
Query: 97 SLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIVESLGLDELE---IFNAYH 153
+ N+V + + PE R + Q E +H+ Y ++++ D + +FNA
Sbjct: 101 GIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIE 160
Query: 154 EIKSIRDKDEFLIPFIDVLTDLKFKTGNTKNDQKLLKSLIVFACIMEGLFFYVGFVQILA 213
+ ++ K ++ + +I D K G + ++ FA + EG+FF F I
Sbjct: 161 TMPYVKKKADWALRWI---ADRKSTFG---------ERVVAFAAV-EGVFFSGSFAAIFW 207
Query: 214 LGRQNKMIGSSELYQYILRDESMHCNF 240
L ++ M G + + I RDE +HC+F
Sbjct: 208 LKKRGLMPGLTFSNELISRDEGLHCDF 234
>UNIPROTKB|I3LUY0 [details] [associations]
symbol:RRM2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046914 "transition metal ion binding" evidence=IEA]
[GO:0009186 "deoxyribonucleoside diphosphate metabolic process"
evidence=IEA] [GO:0005971 "ribonucleoside-diphosphate reductase
complex" evidence=IEA] [GO:0004748 "ribonucleoside-diphosphate
reductase activity, thioredoxin disulfide as acceptor"
evidence=IEA] InterPro:IPR000358 InterPro:IPR009078
InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368 GO:GO:0046914
SUPFAM:SSF47240 Gene3D:1.10.620.20 GO:GO:0005971 GO:GO:0004748
GO:GO:0009186 PANTHER:PTHR23409 GeneTree:ENSGT00390000013305
OMA:YIADWRL Ensembl:ENSSSCT00000026922 Uniprot:I3LUY0
Length = 329
Score = 220 (82.5 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 63/232 (27%), Positives = 121/232 (52%)
Query: 127 EAIHTHAYQYIVESLGLDELEIF-NAYHEIKSIRDKDEFLIPFIDVLTDLKFKTG---NT 182
EA + +Q +E++ + + + Y IK +++ EFL I+ + +K K
Sbjct: 97 EARCFYGFQIAMENIHSEMYSLLIDTY--IKDSKER-EFLFNAIETMPCVKKKADWALRW 153
Query: 183 KNDQKLL--KSLIVFACIMEGLFFYVGFVQILALGRQNKMIGSSELYQYILRDESMHCNF 240
D++ + ++ FA + EG+FF F I L ++ M G + + I RDE +HC+F
Sbjct: 154 IGDKEATYGERVVAFAAV-EGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDF 212
Query: 241 GIDLINTIKMENPNLWTTEFCKEIEQLFLKAIELEYYYAEDTMPKGILGLNVKTFKSYLR 300
+ + + P+ E + ++++ + A+ +E + + +P ++G+N K Y+
Sbjct: 213 ACLMFKHL-LHKPS----E--QRVKEIIVNAVRIEQEFLTEALPVKLIGMNCTLMKQYIE 265
Query: 301 FIANCRMKQIGIKQIFPYERNPFPWMSEMIHIKKESNFFETRVMEYQSGGTL 352
F+A+ M ++G ++F E NPF +M E I ++ ++NFFE RV EYQ G +
Sbjct: 266 FVADRLMLELGFGKVFRVE-NPFDFM-ENISLEGKTNFFEKRVGEYQRMGVM 315
Score = 202 (76.2 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 54/207 (26%), Positives = 99/207 (47%)
Query: 37 LVPFKYNWAWDRYLSSCANHWMPQEINMQRDIELWKNPIGLTEEERRLVKRNLGFFSTAD 96
+ P +Y+ W Y + A+ W +E+++ +DI+ W+ L EER + L FF+ +D
Sbjct: 22 IFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWET---LKPEERYFISHVLAFFAASD 78
Query: 97 SLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIVESLGLDELE---IFNAYH 153
+ N+V + + E R + Q E IH+ Y ++++ D E +FNA
Sbjct: 79 GIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDSKEREFLFNAIE 138
Query: 154 EIKSIRDKDEFLIPFIDVLTDLKFKTGNTKNDQKLLKSLIVFACIMEGLFFYVGFVQILA 213
+ ++ K ++ + +I D + G + ++ FA + EG+FF F I
Sbjct: 139 TMPCVKKKADWALRWIG---DKEATYG---------ERVVAFAAV-EGIFFSGSFASIFW 185
Query: 214 LGRQNKMIGSSELYQYILRDESMHCNF 240
L ++ M G + + I RDE +HC+F
Sbjct: 186 LKKRGLMPGLTFSNELISRDEGLHCDF 212
>UNIPROTKB|H0YAV1 [details] [associations]
symbol:RRM2B "Ribonucleoside-diphosphate reductase subunit
M2 B" species:9606 "Homo sapiens" [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=IEA] [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=IEA]
[GO:0009186 "deoxyribonucleoside diphosphate metabolic process"
evidence=IEA] [GO:0046914 "transition metal ion binding"
evidence=IEA] InterPro:IPR000358 InterPro:IPR009078
InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368 GO:GO:0046914
SUPFAM:SSF47240 Gene3D:1.10.620.20 GO:GO:0005971 GO:GO:0004748
GO:GO:0009186 PANTHER:PTHR23409 EMBL:AP001328 EMBL:AP002907
HGNC:HGNC:17296 ChiTaRS:RRM2B OMA:CLMFHYL Ensembl:ENST00000522368
Uniprot:H0YAV1
Length = 408
Score = 223 (83.6 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 65/228 (28%), Positives = 121/228 (53%)
Query: 127 EAIHTHAYQYIVESLGLDELEIFNAYHEIKSIRD--KDEFLIPFIDVLTDLKFKTGNTKN 184
EA + +Q ++E++ E+++ + IRD K EFL I+ + +K K
Sbjct: 176 EARCFYGFQILIENV---HSEMYSLLIDTY-IRDPKKREFLFNAIETMPYVKKKADWALR 231
Query: 185 ---DQKLL--KSLIVFACIMEGLFFYVGFVQILALGRQNKMIGSSELYQYILRDESMHCN 239
D+K + ++ FA + EG+FF F I L ++ M G + + I RDE +HC+
Sbjct: 232 WIADRKSTFGERVVAFAAV-EGVFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCD 290
Query: 240 FGIDLINTIKMENPNLWTTEFCKEIEQLFLKAIELEYYYAEDTMPKGILGLNVKTFKSYL 299
F + + + P+ E + + ++ + A+++E + + +P G++G+N K Y+
Sbjct: 291 FACLMFQYL-VNKPS----E--ERVREIIVDAVKIEQEFLTEALPVGLIGMNCILMKQYI 343
Query: 300 RFIANCRMKQIGIKQIFPYERNPFPWMSEMIHIKKESNFFETRVMEYQ 347
F+A+ + ++G ++F E NPF +M E I ++ ++NFFE RV EYQ
Sbjct: 344 EFVADRLLVELGFSKVFQAE-NPFDFM-ENISLEGKTNFFEKRVSEYQ 389
Score = 193 (73.0 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 51/207 (24%), Positives = 97/207 (46%)
Query: 37 LVPFKYNWAWDRYLSSCANHWMPQEINMQRDIELWKNPIGLTEEERRLVKRNLGFFSTAD 96
+ P +Y W Y + A+ W +E+++ +D+ W L +E+ + L FF+ +D
Sbjct: 101 IFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNK---LKADEKYFISHILAFFAASD 157
Query: 97 SLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIVESLGLDELE---IFNAYH 153
+ N+V + + PE R + Q E +H+ Y ++++ D + +FNA
Sbjct: 158 GIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIE 217
Query: 154 EIKSIRDKDEFLIPFIDVLTDLKFKTGNTKNDQKLLKSLIVFACIMEGLFFYVGFVQILA 213
+ ++ K ++ + +I D K G + ++ FA + EG+FF F I
Sbjct: 218 TMPYVKKKADWALRWI---ADRKSTFG---------ERVVAFAAV-EGVFFSGSFAAIFW 264
Query: 214 LGRQNKMIGSSELYQYILRDESMHCNF 240
L ++ M G + + I RDE +HC+F
Sbjct: 265 LKKRGLMPGLTFSNELISRDEGLHCDF 291
>TAIR|locus:2092030 [details] [associations]
symbol:TSO2 "TSO MEANING 'UGLY' IN CHINESE 2"
species:3702 "Arabidopsis thaliana" [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0009186 "deoxyribonucleoside diphosphate
metabolic process" evidence=IEA;ISS] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0046914 "transition metal ion binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IMP]
[GO:0006281 "DNA repair" evidence=TAS] [GO:0007275 "multicellular
organismal development" evidence=IMP] [GO:0012501 "programmed cell
death" evidence=IMP] [GO:0051726 "regulation of cell cycle"
evidence=IMP] [GO:0006261 "DNA-dependent DNA replication"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] InterPro:IPR000358 InterPro:IPR009078
InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368 UniPathway:UPA00326
GO:GO:0007275 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006260
GO:GO:0006281 GO:GO:0046914 GO:GO:0051726 EMBL:AB026649
GO:GO:0012501 SUPFAM:SSF47240 KO:K10808 Gene3D:1.10.620.20
GO:GO:0005971 GO:GO:0004748 GO:GO:0009186 ProtClustDB:PLN02492
PANTHER:PTHR23409 EMBL:AY063837 EMBL:AY117212 IPI:IPI00520221
RefSeq:NP_189342.1 UniGene:At.24911 UniGene:At.74191 HSSP:P49723
ProteinModelPortal:Q9LSD0 SMR:Q9LSD0 STRING:Q9LSD0 PRIDE:Q9LSD0
EnsemblPlants:AT3G27060.1 GeneID:822324 KEGG:ath:AT3G27060
GeneFarm:2091 TAIR:At3g27060 InParanoid:Q9LSD0 OMA:YIADWRL
PhylomeDB:Q9LSD0 Genevestigator:Q9LSD0 GermOnline:AT3G27060
Uniprot:Q9LSD0
Length = 332
Score = 218 (81.8 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 51/168 (30%), Positives = 89/168 (52%)
Query: 186 QKLLKSLIVFACIMEGLFFYVGFVQILALGRQNKMIGSSELYQYILRDESMHCNFGIDLI 245
Q + +I FAC+ EG+FF F I L ++ M G + + I RDE +HC+F L
Sbjct: 156 QTFAERIIAFACV-EGIFFSGSFCSIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY 214
Query: 246 NTIKMENPNLWTTEFCKE-IEQLFLKAIELEYYYAEDTMPKGILGLNVKTFKSYLRFIAN 304
+K T+ +E ++ + A+E+E + D +P ++G+N Y+ F+A+
Sbjct: 215 TLLK--------TKLSEERVKSIVCDAVEIEREFVCDALPCALVGMNRDLMSQYIEFVAD 266
Query: 305 CRMKQIGIKQIFPYERNPFPWMSEMIHIKKESNFFETRVMEYQSGGTL 352
+ +G +++ NPF WM E+I ++ ++NFFE RV +YQ +
Sbjct: 267 RLLGALGYGKVYGVT-NPFDWM-ELISLQGKTNFFEKRVGDYQKASVM 312
Score = 215 (80.7 bits), Expect = 7.3e-16, P = 7.3e-16
Identities = 57/216 (26%), Positives = 97/216 (44%)
Query: 37 LVPFKYNWAWDRYLSSCANHWMPQEINMQRDIELWKNPIGLTEEERRLVKRNLGFFSTAD 96
+ P Y W+ Y + A+ W +E+++ +D W+N L + ER +K L FF+ +D
Sbjct: 19 MFPIHYPQIWEMYKKAEASFWTAEEVDLSQDNRDWEN--SLNDGERHFIKHVLAFFAASD 76
Query: 97 SLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIVESLGLDELE---IFNAYH 153
+ N+ + E R + Q E IH+ Y ++++ D E +F A
Sbjct: 77 GIVLENLASRFMSDVQVSEARAFYGFQIAIENIHSEMYSLLLDTYIKDNKERDHLFRAIE 136
Query: 154 EIKSIRDKDEFLIPFIDVLTDLKFKTGNTKNDQKLLKSLIVFACIMEGLFFYVGFVQILA 213
I + K ++ + +ID Q + +I FAC+ EG+FF F I
Sbjct: 137 TIPCVAKKAQWAMKWID-------------GSQTFAERIIAFACV-EGIFFSGSFCSIFW 182
Query: 214 LGRQNKMIGSSELYQYILRDESMHCNFGIDLINTIK 249
L ++ M G + + I RDE +HC+F L +K
Sbjct: 183 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYTLLK 218
>UNIPROTKB|P31350 [details] [associations]
symbol:RRM2 "Ribonucleoside-diphosphate reductase subunit
M2" species:9606 "Homo sapiens" [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=IEA]
[GO:0009186 "deoxyribonucleoside diphosphate metabolic process"
evidence=IEA] [GO:0046914 "transition metal ion binding"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA;NAS]
[GO:0005737 "cytoplasm" evidence=NAS] [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=ISS;NAS] [GO:0009263
"deoxyribonucleotide biosynthetic process" evidence=ISS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000083 "regulation of transcription involved in G1/S phase of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0015949 "nucleobase-containing small
molecule interconversion" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] [GO:0055086 "nucleobase-containing
small molecule metabolic process" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] Reactome:REACT_111217
InterPro:IPR000358 InterPro:IPR009078 InterPro:IPR012348
Pfam:PF00268 PROSITE:PS00368 UniPathway:UPA00326 GO:GO:0005829
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0006260 GO:GO:0046914
GO:GO:0051290 GO:GO:0015949 GO:GO:0000083 SUPFAM:SSF47240 KO:K10808
Gene3D:1.10.620.20 GO:GO:0009263 EMBL:AC104794 GO:GO:0005971
GO:GO:0004748 GO:GO:0009186 eggNOG:COG0208 HOGENOM:HOG000255975
PANTHER:PTHR23409 HOVERGEN:HBG001647 OrthoDB:EOG4BCDN7 OMA:YIADWRL
CTD:6241 EMBL:X59618 EMBL:S40301 EMBL:AY032750 EMBL:AK313719
EMBL:DA477511 EMBL:AC118058 EMBL:BC001886 EMBL:BC030154
IPI:IPI00946732 PIR:S25854 RefSeq:NP_001025.1 RefSeq:NP_001159403.1
UniGene:Hs.226390 PDB:2UW2 PDB:3OLJ PDBsum:2UW2 PDBsum:3OLJ
ProteinModelPortal:P31350 SMR:P31350 DIP:DIP-24232N IntAct:P31350
STRING:P31350 PhosphoSite:P31350 DMDM:400979 PaxDb:P31350
PRIDE:P31350 DNASU:6241 Ensembl:ENST00000304567
Ensembl:ENST00000360566 GeneID:6241 KEGG:hsa:6241 UCSC:uc021vdr.1
GeneCards:GC02P010262 HGNC:HGNC:10452 MIM:180390 neXtProt:NX_P31350
PharmGKB:PA299 InParanoid:P31350 BindingDB:P31350 ChEMBL:CHEMBL1954
EvolutionaryTrace:P31350 GenomeRNAi:6241 NextBio:24237
PMAP-CutDB:P31350 ArrayExpress:P31350 Bgee:P31350 CleanEx:HS_RRM2
Genevestigator:P31350 GermOnline:ENSG00000171848 Uniprot:P31350
Length = 389
Score = 220 (82.5 bits), Expect = 4.2e-16, P = 4.2e-16
Identities = 63/232 (27%), Positives = 120/232 (51%)
Query: 127 EAIHTHAYQYIVESLGLDELEIF-NAYHEIKSIRDKDEFLIPFIDVLTDLKFKTG---NT 182
EA + +Q +E++ + + + Y IK +++ EFL I+ + +K K
Sbjct: 157 EARCFYGFQIAMENIHSEMYSLLIDTY--IKDPKER-EFLFNAIETMPCVKKKADWALRW 213
Query: 183 KNDQKLL--KSLIVFACIMEGLFFYVGFVQILALGRQNKMIGSSELYQYILRDESMHCNF 240
D++ + ++ FA + EG+FF F I L ++ M G + + I RDE +HC+F
Sbjct: 214 IGDKEATYGERVVAFAAV-EGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDF 272
Query: 241 GIDLINTIKMENPNLWTTEFCKEIEQLFLKAIELEYYYAEDTMPKGILGLNVKTFKSYLR 300
+ + + P+ E + + ++ + A+ +E + + +P ++G+N K Y+
Sbjct: 273 ACLMFKHL-VHKPS----E--ERVREIIINAVRIEQEFLTEALPVKLIGMNCTLMKQYIE 325
Query: 301 FIANCRMKQIGIKQIFPYERNPFPWMSEMIHIKKESNFFETRVMEYQSGGTL 352
F+A+ M ++G ++F E NPF +M E I ++ ++NFFE RV EYQ G +
Sbjct: 326 FVADRLMLELGFSKVFRVE-NPFDFM-ENISLEGKTNFFEKRVGEYQRMGVM 375
Score = 202 (76.2 bits), Expect = 6.8e-14, P = 6.8e-14
Identities = 54/207 (26%), Positives = 100/207 (48%)
Query: 37 LVPFKYNWAWDRYLSSCANHWMPQEINMQRDIELWKNPIGLTEEERRLVKRNLGFFSTAD 96
+ P +Y+ W Y + A+ W +E+++ +DI+ W++ L EER + L FF+ +D
Sbjct: 82 IFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWES---LKPEERYFISHVLAFFAASD 138
Query: 97 SLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIVESLGLDELE---IFNAYH 153
+ N+V + + E R + Q E IH+ Y ++++ D E +FNA
Sbjct: 139 GIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKEREFLFNAIE 198
Query: 154 EIKSIRDKDEFLIPFIDVLTDLKFKTGNTKNDQKLLKSLIVFACIMEGLFFYVGFVQILA 213
+ ++ K ++ + +I D + G + ++ FA + EG+FF F I
Sbjct: 199 TMPCVKKKADWALRWIG---DKEATYG---------ERVVAFAAV-EGIFFSGSFASIFW 245
Query: 214 LGRQNKMIGSSELYQYILRDESMHCNF 240
L ++ M G + + I RDE +HC+F
Sbjct: 246 LKKRGLMPGLTFSNELISRDEGLHCDF 272
>UNIPROTKB|E1BI58 [details] [associations]
symbol:RRM2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051290 "protein heterotetramerization" evidence=IEA]
[GO:0009263 "deoxyribonucleotide biosynthetic process"
evidence=IEA] [GO:0004748 "ribonucleoside-diphosphate reductase
activity, thioredoxin disulfide as acceptor" evidence=IEA]
[GO:0046914 "transition metal ion binding" evidence=IEA]
[GO:0009186 "deoxyribonucleoside diphosphate metabolic process"
evidence=IEA] [GO:0005971 "ribonucleoside-diphosphate reductase
complex" evidence=IEA] InterPro:IPR000358 InterPro:IPR009078
InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368 GO:GO:0046914
GO:GO:0051290 SUPFAM:SSF47240 Gene3D:1.10.620.20 GO:GO:0009263
GO:GO:0005971 GO:GO:0004748 GO:GO:0009186 PANTHER:PTHR23409
GeneTree:ENSGT00390000013305 OMA:YIADWRL EMBL:DAAA02031933
IPI:IPI00702653 Ensembl:ENSBTAT00000010802 Uniprot:E1BI58
Length = 390
Score = 220 (82.5 bits), Expect = 4.2e-16, P = 4.2e-16
Identities = 63/232 (27%), Positives = 120/232 (51%)
Query: 127 EAIHTHAYQYIVESLGLDELEIF-NAYHEIKSIRDKDEFLIPFIDVLTDLKFKTG---NT 182
EA + +Q +E++ + + + Y IK +++ EFL I+ + +K K
Sbjct: 158 EARCFYGFQIAMENIHSEMYSLLIDTY--IKDSKER-EFLFNAIETMPCVKKKADWALRW 214
Query: 183 KNDQKLL--KSLIVFACIMEGLFFYVGFVQILALGRQNKMIGSSELYQYILRDESMHCNF 240
D+ + ++ FA + EG+FF F I L ++ M G + + I RDE +HC+F
Sbjct: 215 IGDKAATYGERVVAFAAV-EGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDF 273
Query: 241 GIDLINTIKMENPNLWTTEFCKEIEQLFLKAIELEYYYAEDTMPKGILGLNVKTFKSYLR 300
+ + + P+ E + ++++ + A+ +E + + +P ++G+N K Y+
Sbjct: 274 ACLMFKHL-LHKPS----E--QRVKEIIVNAVRIEQEFLTEALPVKLIGMNCTLMKQYIE 326
Query: 301 FIANCRMKQIGIKQIFPYERNPFPWMSEMIHIKKESNFFETRVMEYQSGGTL 352
F+A+ M ++G ++F E NPF +M E I ++ ++NFFE RV EYQ G +
Sbjct: 327 FVADRLMLELGFSKVFRVE-NPFDFM-ENISLEGKTNFFEKRVGEYQRMGVM 376
Score = 201 (75.8 bits), Expect = 9.0e-14, P = 9.0e-14
Identities = 54/207 (26%), Positives = 98/207 (47%)
Query: 37 LVPFKYNWAWDRYLSSCANHWMPQEINMQRDIELWKNPIGLTEEERRLVKRNLGFFSTAD 96
+ P +Y+ W Y + A+ W +E+++ +DI+ W+ L EER + L FF+ +D
Sbjct: 83 IFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWE---ALKSEERYFISHVLAFFAASD 139
Query: 97 SLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIVESLGLDELE---IFNAYH 153
+ N+V + + E R + Q E IH+ Y ++++ D E +FNA
Sbjct: 140 GIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDSKEREFLFNAIE 199
Query: 154 EIKSIRDKDEFLIPFIDVLTDLKFKTGNTKNDQKLLKSLIVFACIMEGLFFYVGFVQILA 213
+ ++ K ++ + +I D G + ++ FA + EG+FF F I
Sbjct: 200 TMPCVKKKADWALRWIG---DKAATYG---------ERVVAFAAV-EGIFFSGSFASIFW 246
Query: 214 LGRQNKMIGSSELYQYILRDESMHCNF 240
L ++ M G + + I RDE +HC+F
Sbjct: 247 LKKRGLMPGLTFSNELISRDEGLHCDF 273
>UNIPROTKB|Q60561 [details] [associations]
symbol:RRM2 "Ribonucleoside-diphosphate reductase subunit
M2" species:10036 "Mesocricetus auratus" [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=ISS] [GO:0009263
"deoxyribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR000358 InterPro:IPR009078 InterPro:IPR012348
Pfam:PF00268 PROSITE:PS00368 UniPathway:UPA00326 GO:GO:0006260
GO:GO:0046914 SUPFAM:SSF47240 Gene3D:1.10.620.20 GO:GO:0009263
GO:GO:0005971 GO:GO:0004748 GO:GO:0009186 PANTHER:PTHR23409
HOVERGEN:HBG001647 EMBL:X68127 PIR:S27153 ProteinModelPortal:Q60561
SMR:Q60561 Uniprot:Q60561
Length = 386
Score = 219 (82.2 bits), Expect = 5.5e-16, P = 5.5e-16
Identities = 63/232 (27%), Positives = 120/232 (51%)
Query: 127 EAIHTHAYQYIVESLGLDELEIF-NAYHEIKSIRDKDEFLIPFIDVLTDLKFKTG---NT 182
EA + +Q +E++ + + + Y IK +++ E+L I+ + +K K
Sbjct: 158 EARCFYGFQIAMENIHSEMYSLLIDTY--IKDSKER-EYLFNAIETMPCVKKKADWALRW 214
Query: 183 KNDQKLL--KSLIVFACIMEGLFFYVGFVQILALGRQNKMIGSSELYQYILRDESMHCNF 240
D++ + ++ FA + EG+FF F I L ++ M G + + I RDE +HC+F
Sbjct: 215 IGDKEATYGERVVAFAAV-EGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDF 273
Query: 241 GIDLINTIKMENPNLWTTEFCKEIEQLFLKAIELEYYYAEDTMPKGILGLNVKTFKSYLR 300
+ + + P+ E + ++++ A+ +E + + +P ++G+N K Y+
Sbjct: 274 ACLMFKHL-VHKPS----E--QRVQEIITNAVRIEQEFLTEALPVKLIGMNCTLMKQYIE 326
Query: 301 FIANCRMKQIGIKQIFPYERNPFPWMSEMIHIKKESNFFETRVMEYQSGGTL 352
F+A+ M ++G +IF E NPF +M E I ++ ++NFFE RV EYQ G +
Sbjct: 327 FVADRLMLELGFNKIFKVE-NPFDFM-ENISLEGKTNFFEKRVGEYQRMGVM 376
Score = 200 (75.5 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 53/205 (25%), Positives = 98/205 (47%)
Query: 39 PFKYNWAWDRYLSSCANHWMPQEINMQRDIELWKNPIGLTEEERRLVKRNLGFFSTADSL 98
P +Y+ W Y + A+ W +E+++ +DI+ W+ L +ER + L FF+ +D +
Sbjct: 85 PIEYHDIWKMYKKAEASFWTAEEVDLSKDIQHWE---ALKPDERHFISHVLAFFAASDGI 141
Query: 99 AANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIVESLGLDELE---IFNAYHEI 155
N+V + + E R + Q E IH+ Y ++++ D E +FNA +
Sbjct: 142 VNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDSKEREYLFNAIETM 201
Query: 156 KSIRDKDEFLIPFIDVLTDLKFKTGNTKNDQKLLKSLIVFACIMEGLFFYVGFVQILALG 215
++ K ++ + +I D + G + ++ FA + EG+FF F I L
Sbjct: 202 PCVKKKADWALRWIG---DKEATYG---------ERVVAFAAV-EGIFFSGSFASIFWLK 248
Query: 216 RQNKMIGSSELYQYILRDESMHCNF 240
++ M G + + I RDE +HC+F
Sbjct: 249 KRGLMPGLTFSNELISRDEGLHCDF 273
>RGD|2323655 [details] [associations]
symbol:LOC100359539 "ribonucleotide reductase M2 polypeptide"
species:10116 "Rattus norvegicus" [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=IEA] [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=IEA]
[GO:0009186 "deoxyribonucleoside diphosphate metabolic process"
evidence=IEA] [GO:0046914 "transition metal ion binding"
evidence=IEA] InterPro:IPR000358 InterPro:IPR009078
InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368 RGD:2323655
GO:GO:0046914 SUPFAM:SSF47240 KO:K10808 Gene3D:1.10.620.20
GO:GO:0005971 GO:GO:0004748 GO:GO:0009186 PANTHER:PTHR23409
OrthoDB:EOG4BCDN7 GeneTree:ENSGT00390000013305 OMA:YIADWRL
IPI:IPI00195947 RefSeq:XP_003751887.1 RefSeq:XP_003753140.1
Ensembl:ENSRNOT00000011163 GeneID:100359539 KEGG:rno:100359539
Uniprot:D4A7M6
Length = 390
Score = 218 (81.8 bits), Expect = 7.6e-16, P = 7.6e-16
Identities = 63/232 (27%), Positives = 120/232 (51%)
Query: 127 EAIHTHAYQYIVESLGLDELEIF-NAYHEIKSIRDKDEFLIPFIDVLTDLKFKTG---NT 182
EA + +Q +E++ + + + Y IK +++ E+L I+ + +K K
Sbjct: 158 EARCFYGFQIAMENIHSEMYSLLIDTY--IKDSKER-EYLFNAIETMPCVKKKADWALRW 214
Query: 183 KNDQKLL--KSLIVFACIMEGLFFYVGFVQILALGRQNKMIGSSELYQYILRDESMHCNF 240
D++ + ++ FA + EG+FF F I L ++ M G + + I RDE +HC+F
Sbjct: 215 IGDKEATYGERVVAFAAV-EGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDF 273
Query: 241 GIDLINTIKMENPNLWTTEFCKEIEQLFLKAIELEYYYAEDTMPKGILGLNVKTFKSYLR 300
+ + + P+ E + ++++ A+ +E + + +P ++G+N K Y+
Sbjct: 274 ACLMFKHL-VHKPS----E--QRVKEIITNAVRIEQEFLTEALPVKLIGMNCTLMKQYIE 326
Query: 301 FIANCRMKQIGIKQIFPYERNPFPWMSEMIHIKKESNFFETRVMEYQSGGTL 352
F+A+ M ++G +IF E NPF +M E I ++ ++NFFE RV EYQ G +
Sbjct: 327 FVADRLMLELGFNKIFKVE-NPFDFM-ENISLEGKTNFFEKRVGEYQRMGVM 376
Score = 201 (75.8 bits), Expect = 9.0e-14, P = 9.0e-14
Identities = 53/205 (25%), Positives = 98/205 (47%)
Query: 39 PFKYNWAWDRYLSSCANHWMPQEINMQRDIELWKNPIGLTEEERRLVKRNLGFFSTADSL 98
P +Y+ W Y + A+ W +E+++ +DI+ W+ L +ER + L FF+ +D +
Sbjct: 85 PIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWE---ALKPDERHFISHVLAFFAASDGI 141
Query: 99 AANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIVESLGLDELE---IFNAYHEI 155
N+V + + E R + Q E IH+ Y ++++ D E +FNA +
Sbjct: 142 VNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDSKEREYLFNAIETM 201
Query: 156 KSIRDKDEFLIPFIDVLTDLKFKTGNTKNDQKLLKSLIVFACIMEGLFFYVGFVQILALG 215
++ K ++ + +I D + G + ++ FA + EG+FF F I L
Sbjct: 202 PCVKKKADWALRWIG---DKEATYG---------ERVVAFAAV-EGIFFSGSFASIFWLK 248
Query: 216 RQNKMIGSSELYQYILRDESMHCNF 240
++ M G + + I RDE +HC+F
Sbjct: 249 KRGLMPGLTFSNELISRDEGLHCDF 273
>UNIPROTKB|Q4R7Q7 [details] [associations]
symbol:RRM2 "Ribonucleoside-diphosphate reductase subunit
M2" species:9541 "Macaca fascicularis" [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=ISS] [GO:0009263
"deoxyribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR000358 InterPro:IPR009078 InterPro:IPR012348
Pfam:PF00268 PROSITE:PS00368 UniPathway:UPA00326 GO:GO:0006260
GO:GO:0046914 SUPFAM:SSF47240 Gene3D:1.10.620.20 GO:GO:0009263
GO:GO:0005971 GO:GO:0004748 GO:GO:0009186 PANTHER:PTHR23409
HOVERGEN:HBG001647 EMBL:AB168758 ProteinModelPortal:Q4R7Q7
SMR:Q4R7Q7 Uniprot:Q4R7Q7
Length = 389
Score = 215 (80.7 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 62/232 (26%), Positives = 120/232 (51%)
Query: 127 EAIHTHAYQYIVESLGLDELEIF-NAYHEIKSIRDKDEFLIPFIDVLTDLKFKTG---NT 182
EA + +Q +E++ + + + Y IK +++ EFL I+ + ++ K
Sbjct: 157 EARCFYGFQIAMENIHSEMYSLLIDTY--IKDPKER-EFLFNAIETMPCVEKKADWALRW 213
Query: 183 KNDQKLL--KSLIVFACIMEGLFFYVGFVQILALGRQNKMIGSSELYQYILRDESMHCNF 240
D++ + ++ FA + EG+FF F I L ++ M G + + I RDE +HC+F
Sbjct: 214 IGDKEATYGERVVAFAAV-EGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDF 272
Query: 241 GIDLINTIKMENPNLWTTEFCKEIEQLFLKAIELEYYYAEDTMPKGILGLNVKTFKSYLR 300
+ + + P+ E + + ++ + A+ +E + + +P ++G+N K Y+
Sbjct: 273 ACLMFKHL-VHKPS----E--ERVREIIINAVRVEQEFLTEALPVKLIGMNCTLMKQYIE 325
Query: 301 FIANCRMKQIGIKQIFPYERNPFPWMSEMIHIKKESNFFETRVMEYQSGGTL 352
F+A+ M ++G ++F E NPF +M E I ++ ++NFFE RV EYQ G +
Sbjct: 326 FVADRLMLELGFSKVFRVE-NPFDFM-ENISLEGKTNFFEKRVGEYQRMGVM 375
Score = 200 (75.5 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 54/207 (26%), Positives = 99/207 (47%)
Query: 37 LVPFKYNWAWDRYLSSCANHWMPQEINMQRDIELWKNPIGLTEEERRLVKRNLGFFSTAD 96
+ P +Y+ W Y + A+ W +E+++ +DI+ W++ L EER + L FF+ +D
Sbjct: 82 IFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWES---LKPEERYFISHVLAFFAASD 138
Query: 97 SLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIVESLGLDELE---IFNAYH 153
+ N+V + + E R + Q E IH+ Y ++++ D E +FNA
Sbjct: 139 GIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKEREFLFNAIE 198
Query: 154 EIKSIRDKDEFLIPFIDVLTDLKFKTGNTKNDQKLLKSLIVFACIMEGLFFYVGFVQILA 213
+ + K ++ + +I D + G + ++ FA + EG+FF F I
Sbjct: 199 TMPCVEKKADWALRWIG---DKEATYG---------ERVVAFAAV-EGIFFSGSFASIFW 245
Query: 214 LGRQNKMIGSSELYQYILRDESMHCNF 240
L ++ M G + + I RDE +HC+F
Sbjct: 246 LKKRGLMPGLTFSNELISRDEGLHCDF 272
>RGD|1598310 [details] [associations]
symbol:Rrm2 "ribonucleotide reductase M2" species:10116 "Rattus
norvegicus" [GO:0000278 "mitotic cell cycle" evidence=IEP]
[GO:0003674 "molecular_function" evidence=ND] [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=ISO;ISS] [GO:0005635 "nuclear
envelope" evidence=IDA] [GO:0005971 "ribonucleoside-diphosphate
reductase complex" evidence=IEA] [GO:0006206 "pyrimidine nucleobase
metabolic process" evidence=IEP] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0009186 "deoxyribonucleoside
diphosphate metabolic process" evidence=IEA] [GO:0009262
"deoxyribonucleotide metabolic process" evidence=ISO] [GO:0009263
"deoxyribonucleotide biosynthetic process" evidence=ISO;ISS]
[GO:0046914 "transition metal ion binding" evidence=IEA]
[GO:0051259 "protein oligomerization" evidence=ISO] [GO:0051290
"protein heterotetramerization" evidence=ISO] [GO:0055114
"oxidation-reduction process" evidence=ISO] InterPro:IPR000358
InterPro:IPR009078 InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368
UniPathway:UPA00326 RGD:1598310 GO:GO:0005635 GO:GO:0008284
GO:GO:0006260 GO:GO:0006206 GO:GO:0046914 GO:GO:0000278
SUPFAM:SSF47240 KO:K10808 Gene3D:1.10.620.20 GO:GO:0009263
GO:GO:0005971 GO:GO:0004748 GO:GO:0009186 eggNOG:COG0208
HOGENOM:HOG000255975 PANTHER:PTHR23409 HOVERGEN:HBG001647
OrthoDB:EOG4BCDN7 GeneTree:ENSGT00390000013305 CTD:6241
EMBL:BC099082 IPI:IPI00365596 RefSeq:NP_001020911.1
UniGene:Rn.144946 ProteinModelPortal:Q4KLN6 SMR:Q4KLN6
STRING:Q4KLN6 Ensembl:ENSRNOT00000037387 GeneID:362720
KEGG:rno:362720 InParanoid:Q4KLN6 ChEMBL:CHEMBL3941 NextBio:680993
Genevestigator:Q4KLN6 GermOnline:ENSRNOG00000008450 Uniprot:Q4KLN6
Length = 390
Score = 215 (80.7 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 62/232 (26%), Positives = 120/232 (51%)
Query: 127 EAIHTHAYQYIVESLGLDELEIF-NAYHEIKSIRDKDEFLIPFIDVLTDLKFKTG---NT 182
EA + +Q +E++ + + + Y IK +++ E+L I+ + +K K
Sbjct: 158 EARCFYGFQIAMENIHSEMYSLLIDTY--IKDSKER-EYLFNAIETMPCVKKKADWALRW 214
Query: 183 KNDQKLL--KSLIVFACIMEGLFFYVGFVQILALGRQNKMIGSSELYQYILRDESMHCNF 240
D++ + ++ FA + EG+FF F I L ++ M G + + I RDE +HC+F
Sbjct: 215 IGDKEATYGERVVAFAAV-EGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDF 273
Query: 241 GIDLINTIKMENPNLWTTEFCKEIEQLFLKAIELEYYYAEDTMPKGILGLNVKTFKSYLR 300
+ + + P+ E + ++++ ++ +E + + +P ++G+N K Y+
Sbjct: 274 ACLMFKHL-VHKPS----E--QRVKEIITNSVRIEQEFLTEALPVKLIGMNCTLMKQYIE 326
Query: 301 FIANCRMKQIGIKQIFPYERNPFPWMSEMIHIKKESNFFETRVMEYQSGGTL 352
F+A+ M ++G +IF E NPF +M E I ++ ++NFFE RV EYQ G +
Sbjct: 327 FVADRLMLELGFNKIFKVE-NPFDFM-ENISLEGKTNFFEKRVGEYQRMGVM 376
Score = 201 (75.8 bits), Expect = 9.0e-14, P = 9.0e-14
Identities = 53/205 (25%), Positives = 98/205 (47%)
Query: 39 PFKYNWAWDRYLSSCANHWMPQEINMQRDIELWKNPIGLTEEERRLVKRNLGFFSTADSL 98
P +Y+ W Y + A+ W +E+++ +DI+ W+ L +ER + L FF+ +D +
Sbjct: 85 PIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWE---ALKPDERHFISHVLAFFAASDGI 141
Query: 99 AANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIVESLGLDELE---IFNAYHEI 155
N+V + + E R + Q E IH+ Y ++++ D E +FNA +
Sbjct: 142 VNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDSKEREYLFNAIETM 201
Query: 156 KSIRDKDEFLIPFIDVLTDLKFKTGNTKNDQKLLKSLIVFACIMEGLFFYVGFVQILALG 215
++ K ++ + +I D + G + ++ FA + EG+FF F I L
Sbjct: 202 PCVKKKADWALRWIG---DKEATYG---------ERVVAFAAV-EGIFFSGSFASIFWLK 248
Query: 216 RQNKMIGSSELYQYILRDESMHCNF 240
++ M G + + I RDE +HC+F
Sbjct: 249 KRGLMPGLTFSNELISRDEGLHCDF 273
>MGI|MGI:98181 [details] [associations]
symbol:Rrm2 "ribonucleotide reductase M2" species:10090 "Mus
musculus" [GO:0004748 "ribonucleoside-diphosphate reductase
activity, thioredoxin disulfide as acceptor" evidence=IDA;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005635 "nuclear
envelope" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005971 "ribonucleoside-diphosphate reductase complex"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISO] [GO:0009186 "deoxyribonucleoside diphosphate
metabolic process" evidence=IEA] [GO:0009262 "deoxyribonucleotide
metabolic process" evidence=IDA] [GO:0009263 "deoxyribonucleotide
biosynthetic process" evidence=IDA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0046914 "transition metal ion binding"
evidence=IEA] [GO:0051259 "protein oligomerization" evidence=IPI]
[GO:0051290 "protein heterotetramerization" evidence=IPI]
[GO:0055114 "oxidation-reduction process" evidence=IDA]
BRENDA:1.17.4.1 InterPro:IPR000358 InterPro:IPR009078
InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368 UniPathway:UPA00326
MGI:MGI:98181 GO:GO:0006260 GO:GO:0046914 GO:GO:0051290
SUPFAM:SSF47240 KO:K10808 Gene3D:1.10.620.20 GO:GO:0009263
GO:GO:0005971 GO:GO:0004748 GO:GO:0009186 eggNOG:COG0208
HOGENOM:HOG000255975 PANTHER:PTHR23409 HOVERGEN:HBG001647
OrthoDB:EOG4BCDN7 GeneTree:ENSGT00390000013305 OMA:YIADWRL CTD:6241
EMBL:M14223 EMBL:X15666 EMBL:AK088907 EMBL:AK142027 EMBL:AK147111
EMBL:AK161643 EMBL:AK167078 EMBL:AK167204 EMBL:AK168205
EMBL:AK168994 EMBL:BC085136 IPI:IPI00112645 PIR:S06735
RefSeq:NP_033130.1 UniGene:Mm.99 PDB:1AFT PDB:1H0N PDB:1H0O
PDB:1W68 PDB:1W69 PDB:1XSM PDBsum:1AFT PDBsum:1H0N PDBsum:1H0O
PDBsum:1W68 PDBsum:1W69 PDBsum:1XSM DisProt:DP00462
ProteinModelPortal:P11157 SMR:P11157 IntAct:P11157 STRING:P11157
PhosphoSite:P11157 PaxDb:P11157 PRIDE:P11157
Ensembl:ENSMUST00000020980 GeneID:20135 KEGG:mmu:20135
UCSC:uc007ner.2 InParanoid:P11157 BindingDB:P11157
ChEMBL:CHEMBL3527 ChiTaRS:RRM2 EvolutionaryTrace:P11157
NextBio:297647 Bgee:P11157 CleanEx:MM_RRM2 Genevestigator:P11157
GermOnline:ENSMUSG00000020649 Uniprot:P11157
Length = 390
Score = 214 (80.4 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 63/232 (27%), Positives = 118/232 (50%)
Query: 127 EAIHTHAYQYIVESLGLDELEIF-NAYHEIKSIRDKDEFLIPFIDVLTDLKFKTG---NT 182
EA + +Q +E++ + + + Y IK +++ E+L I+ + +K K
Sbjct: 158 EARCFYGFQIAMENIHSEMYSLLIDTY--IKDPKER-EYLFNAIETMPCVKKKADWALRW 214
Query: 183 KNDQKLL--KSLIVFACIMEGLFFYVGFVQILALGRQNKMIGSSELYQYILRDESMHCNF 240
D++ + ++ FA + EG+FF F I L ++ M G + + I RDE +HC+F
Sbjct: 215 IGDKEATYGERVVAFAAV-EGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDF 273
Query: 241 GIDLINTIKMENPNLWTTEFCKEIEQLFLKAIELEYYYAEDTMPKGILGLNVKTFKSYLR 300
+ + + P E + + ++ A+ +E + + +P ++G+N K Y+
Sbjct: 274 ACLMFKHL-VHKP----AE--QRVREIITNAVRIEQEFLTEALPVKLIGMNCTLMKQYIE 326
Query: 301 FIANCRMKQIGIKQIFPYERNPFPWMSEMIHIKKESNFFETRVMEYQSGGTL 352
F+A+ M ++G +IF E NPF +M E I ++ ++NFFE RV EYQ G +
Sbjct: 327 FVADRLMLELGFNKIFRVE-NPFDFM-ENISLEGKTNFFEKRVGEYQRMGVM 376
Score = 200 (75.5 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 53/205 (25%), Positives = 98/205 (47%)
Query: 39 PFKYNWAWDRYLSSCANHWMPQEINMQRDIELWKNPIGLTEEERRLVKRNLGFFSTADSL 98
P +Y+ W Y + A+ W +E+++ +DI+ W+ L +ER + L FF+ +D +
Sbjct: 85 PIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWE---ALKPDERHFISHVLAFFAASDGI 141
Query: 99 AANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIVESLGLDELE---IFNAYHEI 155
N+V + + E R + Q E IH+ Y ++++ D E +FNA +
Sbjct: 142 VNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKEREYLFNAIETM 201
Query: 156 KSIRDKDEFLIPFIDVLTDLKFKTGNTKNDQKLLKSLIVFACIMEGLFFYVGFVQILALG 215
++ K ++ + +I D + G + ++ FA + EG+FF F I L
Sbjct: 202 PCVKKKADWALRWIG---DKEATYG---------ERVVAFAAV-EGIFFSGSFASIFWLK 248
Query: 216 RQNKMIGSSELYQYILRDESMHCNF 240
++ M G + + I RDE +HC+F
Sbjct: 249 KRGLMPGLTFSNELISRDEGLHCDF 273
>ASPGD|ASPL0000055511 [details] [associations]
symbol:AN0067 species:162425 "Emericella nidulans"
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0009186
"deoxyribonucleoside diphosphate metabolic process" evidence=IEA]
[GO:0046914 "transition metal ion binding" evidence=IEA]
[GO:0009263 "deoxyribonucleotide biosynthetic process"
evidence=IEA] [GO:0004748 "ribonucleoside-diphosphate reductase
activity, thioredoxin disulfide as acceptor" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005971 "ribonucleoside-diphosphate reductase
complex" evidence=IEA] InterPro:IPR000358 InterPro:IPR009078
InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368 EMBL:BN001308
GO:GO:0046914 EMBL:AACD01000003 SUPFAM:SSF47240 KO:K10808
Gene3D:1.10.620.20 GO:GO:0005971 GO:GO:0004748 GO:GO:0009186
eggNOG:COG0208 HOGENOM:HOG000255975 PANTHER:PTHR23409 OMA:ICNRRCQ
OrthoDB:EOG4QZBVT RefSeq:XP_657671.1 ProteinModelPortal:Q5BHB3
SMR:Q5BHB3 STRING:Q5BHB3 EnsemblFungi:CADANIAT00002685
GeneID:2875837 KEGG:ani:AN0067.2 Uniprot:Q5BHB3
Length = 406
Score = 213 (80.0 bits), Expect = 3.7e-15, P = 3.7e-15
Identities = 60/215 (27%), Positives = 99/215 (46%)
Query: 29 NGHTDVNQLVPFKYNWAWDRYLSSCANHWMPQEINMQRDIELWKNPIGLTEEERRLVKRN 88
N H V L P KY+ W Y + A+ W +EI++ +D+ W N L E+ER + R
Sbjct: 80 NPHRFV--LFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNR--LNEDERYFISRV 135
Query: 89 LGFFSTADSLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIVESLGLDELE- 147
L FF+ +D + N++ + PE R + Q E IH Y ++++ + +
Sbjct: 136 LAFFAASDGIVNENLLERFSGEVQIPEARCFYGFQIMIENIHAETYSLLIDTYIKEPKQR 195
Query: 148 --IFNAYHEIKSIRDKDEFLIPFIDVLTDLKFKTGNTKNDQKLLKSLIVFACIMEGLFFY 205
+F+A I IR K ++ I +I + + L+ FA + EG+FF
Sbjct: 196 TYLFDAIDTIPCIRKKADWAIKWIQ------------DKESTFAQRLVAFAAV-EGIFFS 242
Query: 206 VGFVQILALGRQNKMIGSSELYQYILRDESMHCNF 240
F I L ++ M G + + I RDE +H +F
Sbjct: 243 GSFASIFWLKKRGLMPGLTFSNELISRDEGLHTDF 277
Score = 209 (78.6 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 57/187 (30%), Positives = 92/187 (49%)
Query: 166 IPFIDVLTDLKFKTGNTKNDQKLLKSLIVFACIMEGLFFYVGFVQILALGRQNKMIGSSE 225
IP I D K K + + L+ FA + EG+FF F I L ++ M G +
Sbjct: 205 IPCIRKKADWAIKWIQDK-ESTFAQRLVAFAAV-EGIFFSGSFASIFWLKKRGLMPGLTF 262
Query: 226 LYQYILRDESMHCNFGIDLINTIKMENPNLWTTEFCKEIEQLFLKAIELEYYYAEDTMPK 285
+ I RDE +H +F L + + W K +E + ++A+ +E + D +P
Sbjct: 263 SNELISRDEGLHTDFACLLFSHLN------WRPSK-KVVEDIIVEAVAIEKEFLTDALPC 315
Query: 286 GILGLNVKTFKSYLRFIANCRMKQIGIKQIFPYERNPFPWMSEMIHIKKESNFFETRVME 345
+LG+N K Y+ F+A+ + +G K+ F NPF +M E I + ++NFFE RV +
Sbjct: 316 ALLGMNAKLMCQYIEFVADRLLVALGNKKYFN-ATNPFDFM-ESISLAGKTNFFEKRVGD 373
Query: 346 YQSGGTL 352
YQ G +
Sbjct: 374 YQKAGVM 380
>UNIPROTKB|C9JXC1 [details] [associations]
symbol:RRM2 "Ribonucleoside-diphosphate reductase subunit
M2" species:9606 "Homo sapiens" [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=IEA] [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=IEA]
[GO:0009186 "deoxyribonucleoside diphosphate metabolic process"
evidence=IEA] [GO:0046914 "transition metal ion binding"
evidence=IEA] InterPro:IPR000358 InterPro:IPR009078
InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368 GO:GO:0046914
SUPFAM:SSF47240 Gene3D:1.10.620.20 EMBL:AC104794 GO:GO:0005971
GO:GO:0004748 GO:GO:0009186 HOGENOM:HOG000255975 PANTHER:PTHR23409
EMBL:AC118058 HGNC:HGNC:10452 IPI:IPI01014515
ProteinModelPortal:C9JXC1 SMR:C9JXC1 STRING:C9JXC1
Ensembl:ENST00000474701 ArrayExpress:C9JXC1 Bgee:C9JXC1
Uniprot:C9JXC1
Length = 289
Score = 202 (76.2 bits), Expect = 8.9e-15, P = 8.9e-15
Identities = 54/207 (26%), Positives = 100/207 (48%)
Query: 37 LVPFKYNWAWDRYLSSCANHWMPQEINMQRDIELWKNPIGLTEEERRLVKRNLGFFSTAD 96
+ P +Y+ W Y + A+ W +E+++ +DI+ W++ L EER + L FF+ +D
Sbjct: 32 IFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWES---LKPEERYFISHVLAFFAASD 88
Query: 97 SLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIVESLGLDELE---IFNAYH 153
+ N+V + + E R + Q E IH+ Y ++++ D E +FNA
Sbjct: 89 GIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKEREFLFNAIE 148
Query: 154 EIKSIRDKDEFLIPFIDVLTDLKFKTGNTKNDQKLLKSLIVFACIMEGLFFYVGFVQILA 213
+ ++ K ++ + +I D + G + ++ FA + EG+FF F I
Sbjct: 149 TMPCVKKKADWALRWIG---DKEATYG---------ERVVAFAAV-EGIFFSGSFASIFW 195
Query: 214 LGRQNKMIGSSELYQYILRDESMHCNF 240
L ++ M G + + I RDE +HC+F
Sbjct: 196 LKKRGLMPGLTFSNELISRDEGLHCDF 222
Score = 145 (56.1 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 45/194 (23%), Positives = 95/194 (48%)
Query: 127 EAIHTHAYQYIVESLGLDELEIF-NAYHEIKSIRDKDEFLIPFIDVLTDLKFKTG---NT 182
EA + +Q +E++ + + + Y IK +++ EFL I+ + +K K
Sbjct: 107 EARCFYGFQIAMENIHSEMYSLLIDTY--IKDPKER-EFLFNAIETMPCVKKKADWALRW 163
Query: 183 KNDQKLL--KSLIVFACIMEGLFFYVGFVQILALGRQNKMIGSSELYQYILRDESMHCNF 240
D++ + ++ FA + EG+FF F I L ++ M G + + I RDE +HC+F
Sbjct: 164 IGDKEATYGERVVAFAAV-EGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDF 222
Query: 241 GIDLINTIKMENPNLWTTEFCKEIEQLFLKAIELEYYYAEDTMPKGILGLNVKTFKSYLR 300
+ + + P+ E + + ++ + A+ +E + + +P ++G+N K Y+
Sbjct: 223 ACLMFKHL-VHKPS----E--ERVREIIINAVRIEQEFLTEALPVKLIGMNCTLMKQYIE 275
Query: 301 FIANCRMKQIGIKQ 314
F+A+ M ++G +
Sbjct: 276 FVADRLMLELGFSK 289
>WB|WBGene00004392 [details] [associations]
symbol:rnr-2 species:6239 "Caenorhabditis elegans"
[GO:0004748 "ribonucleoside-diphosphate reductase activity,
thioredoxin disulfide as acceptor" evidence=IEA] [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=IEA]
[GO:0009186 "deoxyribonucleoside diphosphate metabolic process"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002009 "morphogenesis of an epithelium"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0030728
"ovulation" evidence=IMP] [GO:0007276 "gamete generation"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008406 "gonad development" evidence=IMP] [GO:0016477 "cell
migration" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] InterPro:IPR000358 InterPro:IPR009078
InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368 UniPathway:UPA00326
GO:GO:0008340 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 GO:GO:0030728
GO:GO:0006260 GO:GO:0046914 GO:GO:0040035 SUPFAM:SSF47240 KO:K10808
Gene3D:1.10.620.20 EMBL:Z35637 GO:GO:0005971 GO:GO:0004748
GO:GO:0009186 eggNOG:COG0208 HOGENOM:HOG000255975 PANTHER:PTHR23409
GeneTree:ENSGT00390000013305 PIR:T18876 RefSeq:NP_497821.1
ProteinModelPortal:P42170 SMR:P42170 DIP:DIP-24490N IntAct:P42170
MINT:MINT-1055286 STRING:P42170 PaxDb:P42170 PRIDE:P42170
EnsemblMetazoa:C03C10.3.1 EnsemblMetazoa:C03C10.3.2 GeneID:175525
KEGG:cel:CELE_C03C10.3 UCSC:C03C10.3.1 CTD:175525 WormBase:C03C10.3
InParanoid:P42170 OMA:ICNRRCQ NextBio:888524 Uniprot:P42170
Length = 381
Score = 205 (77.2 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 65/244 (26%), Positives = 119/244 (48%)
Query: 116 CRQYLLRQAFEEAIHTHAYQYIVESLGLDELEIFNAYHEIKSIRDKDE--FLIPFIDVLT 173
C ++ EA + +Q +E++ E+++ E IRD+ E L +D
Sbjct: 138 CERFSNEVQVSEARFFYGFQIAIENI---HSEMYSKLIETY-IRDETERNTLFNAVDEFE 193
Query: 174 DLKFKTG---NTKNDQK--LLKSLIVFACIMEGLFFYVGFVQILALGRQNKMIGSSELYQ 228
+K K +D+K + LI FA + EG+FF F I L ++ M G + +
Sbjct: 194 FIKKKADWALRWISDKKASFAERLIAFAAV-EGIFFSGSFASIFWLKKRGLMPGLTHSNE 252
Query: 229 YILRDESMHCNFGIDLINTIKMENPNLWTTEFCKEIEQLFLKAIELEYYYAEDTMPKGIL 288
I RDE +H +F L + ++ + T+ + I + A+ +E + + +P ++
Sbjct: 253 LISRDEGLHRDFACLLYSKLQKK-----LTQ--QRIYDIIKDAVAIEQEFLTEALPVDMI 305
Query: 289 GLNVKTFKSYLRFIANCRMKQIGIKQIFPYERNPFPWMSEMIHIKKESNFFETRVMEYQS 348
G+N + Y+ F+A+ + ++G +++ +NPF +M E I I ++NFFE RV EYQ
Sbjct: 306 GMNCRLMSQYIEFVADHLLVELGCDKLYK-SKNPFDFM-ENISIDGKTNFFEKRVSEYQR 363
Query: 349 GGTL 352
G +
Sbjct: 364 PGVM 367
Score = 202 (76.2 bits), Expect = 6.3e-14, P = 6.3e-14
Identities = 63/239 (26%), Positives = 112/239 (46%)
Query: 37 LVPFKYNWAWDRYLSSCANHWMPQEINMQRDIELWKNPIGLTEEERRLVKRNLGFFSTAD 96
+ P K++ W+ Y + A+ W +E+++ +D+ W+ G +E+ + R L FF+ +D
Sbjct: 74 IFPLKHHDIWNFYKKAVASFWTVEEVDLGKDMNDWEKMNG---DEQYFISRILAFFAASD 130
Query: 97 SLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIVESLGLDELE---IFNAYH 153
+ N+ + E R + Q E IH+ Y ++E+ DE E +FNA
Sbjct: 131 GIVNENLCERFSNEVQVSEARFFYGFQIAIENIHSEMYSKLIETYIRDETERNTLFNAVD 190
Query: 154 EIKSIRDKDEFLIPFIDVLTDLKFKTGNTKNDQKLLKSLIVFACIMEGLFFYVGFVQILA 213
E + I+ K ++ + +I +D K + LI FA + EG+FF F I
Sbjct: 191 EFEFIKKKADWALRWI---SDKK---------ASFAERLIAFAAV-EGIFFSGSFASIFW 237
Query: 214 LGRQNKMIGSSELYQYILRDESMHCNFGIDLINTIKMENPNLWTTEFCKE---IEQLFL 269
L ++ M G + + I RDE +H +F L + ++ + + K+ IEQ FL
Sbjct: 238 LKKRGLMPGLTHSNELISRDEGLHRDFACLLYSKLQKKLTQQRIYDIIKDAVAIEQEFL 296
>UNIPROTKB|E2R7H9 [details] [associations]
symbol:RRM2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046914 "transition metal ion binding"
evidence=IEA] [GO:0009186 "deoxyribonucleoside diphosphate
metabolic process" evidence=IEA] [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=IEA]
[GO:0004748 "ribonucleoside-diphosphate reductase activity,
thioredoxin disulfide as acceptor" evidence=IEA] InterPro:IPR000358
InterPro:IPR009078 InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368
GO:GO:0046914 SUPFAM:SSF47240 Gene3D:1.10.620.20 GO:GO:0005971
GO:GO:0004748 GO:GO:0009186 PANTHER:PTHR23409
GeneTree:ENSGT00390000013305 OMA:YIADWRL EMBL:AAEX03010710
Ensembl:ENSCAFT00000005482 Uniprot:E2R7H9
Length = 381
Score = 204 (76.9 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 59/223 (26%), Positives = 116/223 (52%)
Query: 127 EAIHTHAYQYIVESLGLDELEIF-NAYHEIKSIRDKDEFLIPFIDVLTDLKFKTG---NT 182
EA + +Q +E++ + + + Y IK +++ EFL I+ + +K K
Sbjct: 162 EARCFYGFQIAMENIHSEMYSLLIDTY--IKDSKER-EFLFNAIETMPCVKKKADWALRW 218
Query: 183 KNDQKLL--KSLIVFACIMEGLFFYVGFVQILALGRQNKMIGSSELYQYILRDESMHCNF 240
D++ + ++ FA + EG+FF F I L ++ M G + + I RDE +HC+F
Sbjct: 219 IGDKEATYGERVVAFAAV-EGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDF 277
Query: 241 GIDLINTIKMENPNLWTTEFCKEIEQLFLKAIELEYYYAEDTMPKGILGLNVKTFKSYLR 300
+ + + P+ E + ++++ + A+ +E + + +P ++G+N K Y+
Sbjct: 278 ACLMFKHL-VHKPS----E--QRVKEIIINAVRIEQEFLTEALPVKLIGMNCTLMKQYIE 330
Query: 301 FIANCRMKQIGIKQIFPYERNPFPWMSEMIHIKKESNFFETRV 343
F+A+ M ++G ++F E NPF +M E I ++ ++NFFE RV
Sbjct: 331 FVADRLMLELGFSKVFRVE-NPFDFM-ENISLEGKTNFFEKRV 371
Score = 203 (76.5 bits), Expect = 4.7e-14, P = 4.7e-14
Identities = 54/207 (26%), Positives = 100/207 (48%)
Query: 37 LVPFKYNWAWDRYLSSCANHWMPQEINMQRDIELWKNPIGLTEEERRLVKRNLGFFSTAD 96
+ P +Y+ W Y + A+ W +E+++ +DI+ W++ L EER + L FF+ +D
Sbjct: 87 IFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWES---LKPEERYFISHVLAFFAASD 143
Query: 97 SLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIVESLGLDELE---IFNAYH 153
+ N+V + + E R + Q E IH+ Y ++++ D E +FNA
Sbjct: 144 GIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDSKEREFLFNAIE 203
Query: 154 EIKSIRDKDEFLIPFIDVLTDLKFKTGNTKNDQKLLKSLIVFACIMEGLFFYVGFVQILA 213
+ ++ K ++ + +I D + G + ++ FA + EG+FF F I
Sbjct: 204 TMPCVKKKADWALRWIG---DKEATYG---------ERVVAFAAV-EGIFFSGSFASIFW 250
Query: 214 LGRQNKMIGSSELYQYILRDESMHCNF 240
L ++ M G + + I RDE +HC+F
Sbjct: 251 LKKRGLMPGLTFSNELISRDEGLHCDF 277
>TIGR_CMR|BA_1372 [details] [associations]
symbol:BA_1372 "ribonucleoside-diphosphate reductase, beta
subunit" species:198094 "Bacillus anthracis str. Ames" [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=ISS]
[GO:0009265 "2'-deoxyribonucleotide biosynthetic process"
evidence=ISS] InterPro:IPR000358 InterPro:IPR009078
InterPro:IPR012348 InterPro:IPR026023 InterPro:IPR026494
Pfam:PF00268 PIRSF:PIRSF000355 PROSITE:PS00368 UniPathway:UPA00326
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006260
GO:GO:0046914 SUPFAM:SSF47240 Gene3D:1.10.620.20 GO:GO:0009263
GO:GO:0005971 GO:GO:0004748 GO:GO:0009186 PANTHER:PTHR23409
KO:K00526 OMA:IGYKYQR TIGRFAMs:TIGR04171 ProtClustDB:PRK09614
EMBL:AJ704809 RefSeq:NP_843830.1 RefSeq:YP_017994.1
RefSeq:YP_027539.1 HSSP:O69274 ProteinModelPortal:Q81TB4
IntAct:Q81TB4 DNASU:1088648 EnsemblBacteria:EBBACT00000008443
EnsemblBacteria:EBBACT00000017714 EnsemblBacteria:EBBACT00000022580
GeneID:1088648 GeneID:2816900 GeneID:2849972 KEGG:ban:BA_1372
KEGG:bar:GBAA_1372 KEGG:bat:BAS1270
BioCyc:BANT260799:GJAJ-1344-MONOMER
BioCyc:BANT261594:GJ7F-1400-MONOMER Uniprot:Q81TB4
Length = 322
Score = 198 (74.8 bits), Expect = 8.9e-14, P = 8.9e-14
Identities = 77/291 (26%), Positives = 126/291 (43%)
Query: 54 ANHWMPQEINMQRDIELWKNPIGLTEEERRLVKRNLGFFSTADSLAANNIVLGTYRHITA 113
A W +EI + D W + L++EE+ KR LG + D+ + H+
Sbjct: 23 AQFWTEEEIAVSSDKNTW---VQLSKEEQIAYKRVLGGLTLLDTKQGGEGMPLVLVHLEN 79
Query: 114 PECRQYLLRQAFEEAIHTHAYQYIVESLGLDELEIFNAYHEIKSIRDKDEFLIPFIDVLT 173
+ + L E +H +Y +I +L +E EI EI D L ++T
Sbjct: 80 LQAKSVLAFMGAMEEVHAKSYSHIFTTLATEE-EI----DEIFDWVDTHPLLEKKAGIIT 134
Query: 174 DLKFKTGNTKNDQKLLKSLIVFACIMEGLFFYVGFVQILALGRQNKMIGSSELYQYILRD 233
+ + +K L +V + +E FY GF L L Q K+ S E+ I+RD
Sbjct: 135 SYYRRLLKPEVTKKELYMAMVASVFLESYLFYSGFFYPLYLAGQGKLTASGEIINLIIRD 194
Query: 234 ESMHCNF-GIDLINTIKMENPNLWTTEFCKEIEQLFLKAIELEYYYAEDTMPKGILGLNV 292
ES+H F GI L I E E KE ++L ++ E+E Y E+ +GL V
Sbjct: 195 ESIHGVFVGI-LAQQIFAELSAEDQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL-V 250
Query: 293 KTFKSYLRFIANCRMKQIGIKQIFPYER-NPFPWMSEMIHIKKESNFFETR 342
+ ++R+ AN + +G++ F E NP ++ + K +FF +
Sbjct: 251 EDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSVK 300
>POMBASE|SPBC25D12.04 [details] [associations]
symbol:suc22 "ribonucleotide reductase small subunit
Suc22" species:4896 "Schizosaccharomyces pombe" [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005971 "ribonucleoside-diphosphate reductase complex"
evidence=IEA] [GO:0006213 "pyrimidine nucleoside metabolic process"
evidence=IC] [GO:0007090 "regulation of S phase of mitotic cell
cycle" evidence=IC] [GO:0009186 "deoxyribonucleoside diphosphate
metabolic process" evidence=IEA] [GO:0009212 "pyrimidine
deoxyribonucleoside triphosphate biosynthetic process" evidence=IC]
[GO:0009216 "purine deoxyribonucleoside triphosphate biosynthetic
process" evidence=IC] [GO:0042278 "purine nucleoside metabolic
process" evidence=IC] [GO:0046914 "transition metal ion binding"
evidence=IEA] [GO:0090329 "regulation of DNA-dependent DNA
replication" evidence=TAS] InterPro:IPR000358 InterPro:IPR009078
InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368 UniPathway:UPA00326
PomBase:SPBC25D12.04 GO:GO:0005829 GO:GO:0005634 GO:GO:0006260
EMBL:CU329671 GO:GO:0046914 GenomeReviews:CU329671_GR
SUPFAM:SSF47240 GO:GO:0007090 KO:K10808 GO:GO:0090329
Gene3D:1.10.620.20 GO:GO:0006213 GO:GO:0042278 GO:GO:0005971
GO:GO:0004748 GO:GO:0009186 GO:GO:0009216 GO:GO:0009212
eggNOG:COG0208 HOGENOM:HOG000255975 PANTHER:PTHR23409 OMA:LEPMFLG
EMBL:X65115 PIR:S34808 PIR:T39992 RefSeq:NP_596546.1
ProteinModelPortal:P36603 SMR:P36603 STRING:P36603 PRIDE:P36603
EnsemblFungi:SPBC25D12.04.1 GeneID:2540381 KEGG:spo:SPBC25D12.04
OrthoDB:EOG4QZBVT NextBio:20801509 Uniprot:P36603
Length = 391
Score = 193 (73.0 bits), Expect = 8.1e-13, P = 8.1e-13
Identities = 48/161 (29%), Positives = 84/161 (52%)
Query: 192 LIVFACIMEGLFFYVGFVQILALGRQNKMIGSSELYQYILRDESMHCNFGIDLINTIKME 251
L+ FA + EG+FF F I L ++ M G + + I RDE +H +F + + +K
Sbjct: 222 LVAFAAV-EGIFFSGSFASIFWLKKRGLMPGLTFSNELICRDEGLHTDFACLMFSHLK-H 279
Query: 252 NPNLWTTEFCKEIEQLFLKAIELEYYYAEDTMPKGILGLNVKTFKSYLRFIANCRMKQIG 311
P K +E + ++A+++E Y D +P +LG+N Y+ F+A+ + +G
Sbjct: 280 RPGR------KVVEAIIVEAVDIEKEYFTDALPVSLLGMNKDLMCQYIEFVADRLLVALG 333
Query: 312 IKQIFPYERNPFPWMSEMIHIKKESNFFETRVMEYQSGGTL 352
+ + NPF +M E I + ++NFFE +V +YQ G +
Sbjct: 334 NDKYYNVT-NPFDFM-ENISLAGKTNFFEKKVSDYQIAGVM 372
Score = 184 (69.8 bits), Expect = 9.1e-12, P = 9.1e-12
Identities = 58/224 (25%), Positives = 104/224 (46%)
Query: 29 NGHTDVNQLVPFKYNWAWDRYLSSCANHWMPQEINMQRDIELWKNPIGLTEEERRLVKRN 88
N H V L P KY+ W Y + A+ W +EI++ +D+ W N L +ER +
Sbjct: 72 NPHRFV--LFPIKYHEIWQFYKKAEASFWTAEEIDLSKDLVDWDNK--LNADERYFISTV 127
Query: 89 LGFFSTADSLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIVESLGLDELEI 148
L +F+ +D + N++ + PE R Q E IH+ Y ++++ + E
Sbjct: 128 LAYFAASDGIVNENLLERFSSEVQIPEARCVYGFQIMIENIHSETYSLLLDTYIREPKEK 187
Query: 149 ---FNAYHEIKSIRDKDEFLIPFIDVLTDLKFKTGNTKNDQKLLKSLIVFACIMEGLFFY 205
F+A + SI+ K ++ + +I N ++ ++ L+ FA + EG+FF
Sbjct: 188 QRHFDAILTMGSIKAKAKWALRWI-----------NDEDSTYAIR-LVAFAAV-EGIFFS 234
Query: 206 VGFVQILALGRQNKMIGSSELYQYILRDESMHCNFGIDLINTIK 249
F I L ++ M G + + I RDE +H +F + + +K
Sbjct: 235 GSFASIFWLKKRGLMPGLTFSNELICRDEGLHTDFACLMFSHLK 278
>UNIPROTKB|Q4JQV7 [details] [associations]
symbol:ORF18 "Ribonucleoside-diphosphate reductase small
chain" species:341980 "Human herpesvirus 3 strain Oka vaccine"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR000358
InterPro:IPR009078 InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368
UniPathway:UPA00326 GO:GO:0016021 GO:GO:0006260 GO:GO:0046914
SUPFAM:SSF47240 Gene3D:1.10.620.20 GO:GO:0033644 EMBL:AB097932
EMBL:AB097933 EMBL:DQ008354 EMBL:DQ008355 GO:GO:0005971
GO:GO:0004748 GO:GO:0009186 PANTHER:PTHR23409
ProtClustDB:CLSP2509600 RefSeq:NP_040141.1
ProteinModelPortal:Q4JQV7 IntAct:Q4JQV7 GeneID:1487715
Uniprot:Q4JQV7
Length = 306
Score = 184 (69.8 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 79/308 (25%), Positives = 132/308 (42%)
Query: 52 SCANHWMPQEINMQRDIELWKNPIGLTEEERRLVKRNLGFFSTADSLAANNIVLGTYRHI 111
S +N W+ + ++ D + LTE+E + F S AD L N+ LG+ +
Sbjct: 25 SISNRWLESDFIIEDDYQYLDC---LTEDELIFYRFIFTFLSAADDLV--NVNLGSLTQL 79
Query: 112 -TAPECRQYLLRQAFEEAIHTHAYQYIVESL--GLDELEI--FNAYHEIKSIRDKDEFLI 166
+ + Y + Q E +H Y I L G + L + N SI+ K ++L
Sbjct: 80 FSQKDIHHYYIEQECIEVVHARVYSQIQLMLFRGDESLRVQYVNVTINNPSIQQKVQWL- 138
Query: 167 PFIDVLTDLKFKTGNTKNDQKLLKSLIVFACIMEGLFFYVGFVQILALGRQNKMIGSSEL 226
+ K + + ++ +L LI EG+FF F I L + + +
Sbjct: 139 -------EEKVRDNPSVAEKYILMILI------EGIFFVSSFAAIAYLRNNGLFVVTCQF 185
Query: 227 YQYILRDESMHCNFGIDLINTIKMENPNLWTTEFCKEIEQLFLKAIELEYYYAEDTMPKG 286
I RDE++H + + N E P + I QLF +A+E+E + + PK
Sbjct: 186 NDLISRDEAIHTSASCCIYNNYVPEKPAI------TRIHQLFSEAVEIECAFLKSHAPKT 239
Query: 287 ILGLNVKTFKSYLRFIANCRMKQIGIKQIF--PYERNPFPWMSEMIHIKKESNFFETRVM 344
L +NV Y++F A+ + I + ++F P + FP ++ MI K +NFFE
Sbjct: 240 RL-VNVDAITQYVKFSADRLLSAINVPKLFNTPPPDSDFP-LAFMI-ADKNTNFFERHST 296
Query: 345 EYQSGGTL 352
Y GT+
Sbjct: 297 SY--AGTV 302
>UNIPROTKB|I3LV77 [details] [associations]
symbol:I3LV77 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046914 "transition metal ion binding" evidence=IEA]
[GO:0009186 "deoxyribonucleoside diphosphate metabolic process"
evidence=IEA] [GO:0005971 "ribonucleoside-diphosphate reductase
complex" evidence=IEA] [GO:0004748 "ribonucleoside-diphosphate
reductase activity, thioredoxin disulfide as acceptor"
evidence=IEA] InterPro:IPR000358 InterPro:IPR009078
InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368 GO:GO:0046914
SUPFAM:SSF47240 Gene3D:1.10.620.20 GO:GO:0005971 GO:GO:0004748
GO:GO:0009186 PANTHER:PTHR23409 GeneTree:ENSGT00390000013305
EMBL:CU856316 Ensembl:ENSSSCT00000017108 Uniprot:I3LV77
Length = 379
Score = 187 (70.9 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 61/232 (26%), Positives = 117/232 (50%)
Query: 127 EAIHTHAYQYIVESLGLDELEIF-NAYHEIKSIRDKDEFLIPFIDVLTDLKFKTG---NT 182
EA + +Q +E++ + + + Y IK ++ EFL I+ + +K + +
Sbjct: 152 EARCFYGFQIAMENIHSEMYSLLIDTY--IKDSKES-EFLFNAIETMPCVKKEADWALHW 208
Query: 183 KNDQKLLKS--LIVFACIMEGLFFYVGFVQILALGRQNKMIGSSELYQYILRDESMHCNF 240
D++ + +I FA + EG+FF F L ++ M G + I RDE +HC+F
Sbjct: 209 MGDKEAPRGERVITFAAV-EGIFFSGSFASTFWLKKRGLMPGLT-----ISRDEGLHCDF 262
Query: 241 GIDLINTIKMENPNLWTTEFCKEIEQLFLKAIELEYYYAEDTMPKGILGLNVKTFKSYLR 300
L+ + + P+ E + ++++ + A+ +E + + +P + G+N K Y+
Sbjct: 263 AC-LMFKLLLHKPS----E--QRVKEIIINAVRIEQEFFIEELPVKLTGMNCTLMKQYIE 315
Query: 301 FIANCRMKQIGIKQIFPYERNPFPWMSEMIHIKKESNFFETRVMEYQSGGTL 352
F+A+ ++G ++F E NPF +M E I ++ ++NF E RV EYQ G +
Sbjct: 316 FVADRLRLELGFSKVFRVE-NPFDFM-ENISLEGKTNFSEKRVGEYQRMGVM 365
Score = 141 (54.7 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 44/189 (23%), Positives = 86/189 (45%)
Query: 37 LVPFKYNWAWDRYLSSCANHWMPQEINMQRDIELWKNPIGLTEEERRLVKRNLGFFSTAD 96
+ P KY+ W Y + A+ W +E+ + + I+ W+ + +ER + +L FF+ +D
Sbjct: 78 IFPIKYHDIWQMYKKAEASFWTAEEVGLSKGIQHWET---MKPKERYFIS-HLAFFAASD 133
Query: 97 SLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIVESLGLDELE---IFNAYH 153
+ N+V + I E R + Q E IH+ Y ++++ D E +FNA
Sbjct: 134 GIVDENLVEWFSQEIQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDSKESEFLFNAIE 193
Query: 154 EIKSIRDKDEFLIPFIDVLTDLKFKTGNTKNDQKLLKSLIVFACIMEGLFFYVGFVQILA 213
+ ++ + ++ + ++ D + G + +I FA + EG+FF F
Sbjct: 194 TMPCVKKEADWALHWMG---DKEAPRG---------ERVITFAAV-EGIFFSGSFASTFW 240
Query: 214 LGRQNKMIG 222
L ++ M G
Sbjct: 241 LKKRGLMPG 249
>TIGR_CMR|SO_2416 [details] [associations]
symbol:SO_2416 "ribonucleoside-diphosphate reductase, beta
subunit" species:211586 "Shewanella oneidensis MR-1" [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=ISS] [GO:0009265
"2'-deoxyribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR000358 InterPro:IPR009078 InterPro:IPR012348
Pfam:PF00268 PROSITE:PS00368 GO:GO:0046914 EMBL:AE014299
GenomeReviews:AE014299_GR SUPFAM:SSF47240 Gene3D:1.10.620.20
GO:GO:0005971 GO:GO:0004748 GO:GO:0009186 OMA:ELEIEWA
PANTHER:PTHR23409 KO:K00526 HOGENOM:HOG000278087
ProtClustDB:PRK09101 RefSeq:NP_718006.1 HSSP:P00453
ProteinModelPortal:Q8EEG6 SMR:Q8EEG6 GeneID:1170131
KEGG:son:SO_2416 PATRIC:23524449 Uniprot:Q8EEG6
Length = 376
Score = 184 (69.8 bits), Expect = 8.1e-12, P = 8.1e-12
Identities = 45/155 (29%), Positives = 79/155 (50%)
Query: 181 NTKNDQKLLKSLIVFACIMEGLFFYVGFVQILALGRQNKMIGSSELYQYILRDESMHCNF 240
NT+ +K L ++ +E + FYV F A + M G++++ + I RDE++H N
Sbjct: 186 NTRTLKKALYLCMMSVNALEAIRFYVSFACSFAFAERKLMEGNAKIIRLIARDEALHLNS 245
Query: 241 GIDLINTIK--MENPNLWTTEF-CK-EIEQLFLKAIELEYYYAEDTMPKG-ILGLNVKTF 295
++ ++ ++P + C+ E LFLKA E E +A+ G ++GLN +
Sbjct: 246 TQHILTIMQGGKDDPEMGEIAIECQQEAYNLFLKAAEQEKEWAKYLFKDGSMIGLNEQIL 305
Query: 296 KSYLRFIANCRMKQIGIKQIFPYERNPFPWMSEMI 330
Y+ +I N RMK + + Q + + NP PWM +
Sbjct: 306 CQYVEYITNQRMKSVNLPQPYAEQTNPLPWMKNWL 340
Score = 152 (58.6 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 51/200 (25%), Positives = 93/200 (46%)
Query: 57 WMPQEINMQRDIELWKNPIGLTEEERRLVKRNLGFFSTADSLAANNIVLGTYRHITAPEC 116
W P+E+++ RD ++ N L + E+ + NL + + DS+ + + ++ PE
Sbjct: 49 WRPEEVDVSRD-KIDYN--SLPDHEKHIFISNLKYQTLLDSIQGRSPNVAFLPLVSLPEL 105
Query: 117 RQYLLRQAFEEAIHTHAYQYIVESLGLDELEIFN---AYHEI-KSIRDKDEFLIPFIDVL 172
++ +F E IH+ +Y +I+ ++ D IF+ HEI + D EF I L
Sbjct: 106 ETWIETWSFSETIHSRSYTHIIRNIVNDPSVIFDDIVVNHEILRRATDIAEFYDHLIK-L 164
Query: 173 TDLKFKTG-------------NTKNDQKLLKSLIVFACIMEGLFFYVGFVQILALGRQNK 219
T + G NT+ +K L ++ +E + FYV F A +
Sbjct: 165 TQIYHLLGEGTHVIDGEPVEVNTRTLKKALYLCMMSVNALEAIRFYVSFACSFAFAERKL 224
Query: 220 MIGSSELYQYILRDESMHCN 239
M G++++ + I RDE++H N
Sbjct: 225 MEGNAKIIRLIARDEALHLN 244
>WB|WBGene00019055 [details] [associations]
symbol:F58F9.1 species:6239 "Caenorhabditis elegans"
[GO:0004748 "ribonucleoside-diphosphate reductase activity,
thioredoxin disulfide as acceptor" evidence=IEA] [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=IEA]
[GO:0009186 "deoxyribonucleoside diphosphate metabolic process"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0019915 "lipid storage" evidence=IMP] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR000358
InterPro:IPR009078 InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368
GO:GO:0046914 GO:GO:0006974 GO:GO:0019915 SUPFAM:SSF47240
Gene3D:1.10.620.20 EMBL:FO081504 GO:GO:0005971 GO:GO:0004748
GO:GO:0009186 eggNOG:COG0208 PANTHER:PTHR23409
GeneTree:ENSGT00390000013305 EMBL:FO080901 RefSeq:NP_500944.2
UniGene:Cel.36857 ProteinModelPortal:Q20993 SMR:Q20993
EnsemblMetazoa:F58F9.1 GeneID:186533 KEGG:cel:CELE_F58F9.1
UCSC:F58F9.1 CTD:186533 WormBase:F58F9.1 InParanoid:Q20993
NextBio:932178 Uniprot:Q20993
Length = 581
Score = 143 (55.4 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 46/197 (23%), Positives = 87/197 (44%)
Query: 39 PFKYNWAWDRYLSSCANHWMPQEINMQRDIELWKNPIGLTEEERRLVKRNLGFFSTADSL 98
P + W+ Y + A W +E+++ +D+ W+ LT +ER+ + L FF+ +D +
Sbjct: 321 PIVHRDIWEFYKKAVACFWTSEEVDLGKDMSHWEI---LTSDERQFISSILAFFAASDGI 377
Query: 99 AANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIVESLGLDELE---IFNAYHEI 155
N+ + E R + Q E IH+ Y ++E+ D+ E +FNA
Sbjct: 378 VTENLCSRFSTEVQVTEARFFYGFQIAVENIHSEMYAKLLEAYIRDDAERNILFNAITTF 437
Query: 156 KSIRDKDEFLIPFIDVLTDLKFKTGNTKNDQKLLKSLIVFACIMEGLFFYVGFVQILALG 215
K I+ K ++ + +I + ++ + L A + EG+FF F I L
Sbjct: 438 KFIKAKADWCLRWI------------SDHNAPFSERLAAVAAV-EGIFFSSSFAAIFWLK 484
Query: 216 RQNKMIGSSELYQYILR 232
++ + G + + I R
Sbjct: 485 KRGLLPGLTHSNELISR 501
Score = 89 (36.4 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 18/76 (23%), Positives = 45/76 (59%)
Query: 264 IEQLFLKAIELEYYYAEDTMPKGILGLNVKTFKSYLRFIANCRMKQIGIKQIFPYERNPF 323
I ++ +++ +E + +++P ++G+N Y+ F+A+ ++++G + + +N F
Sbjct: 508 ITEIINESVLVEQDFVRESLPTNLIGMNQHMMCKYVEFVADLLLEELGYSKRYN-TKNLF 566
Query: 324 PWMSEMIHIKKESNFF 339
+M E I I+ ++NFF
Sbjct: 567 DFM-ENISIEGKTNFF 581
>TIGR_CMR|CPS_2327 [details] [associations]
symbol:CPS_2327 "ribonucleotide reductase, beta subunit"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=ISS] [GO:0009265
"2'-deoxyribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR000358 InterPro:IPR009078 InterPro:IPR012348
Pfam:PF00268 PROSITE:PS00368 GO:GO:0046914 EMBL:CP000083
GenomeReviews:CP000083_GR SUPFAM:SSF47240 Gene3D:1.10.620.20
GO:GO:0005971 GO:GO:0004748 GO:GO:0009186 eggNOG:COG0208
PANTHER:PTHR23409 KO:K00526 HOGENOM:HOG000278087 OMA:LEPMFLG
ProtClustDB:PRK09101 RefSeq:YP_269047.1 ProteinModelPortal:Q482H0
SMR:Q482H0 STRING:Q482H0 GeneID:3520513 KEGG:cps:CPS_2327
PATRIC:21467747 BioCyc:CPSY167879:GI48-2392-MONOMER Uniprot:Q482H0
Length = 376
Score = 170 (64.9 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 50/197 (25%), Positives = 97/197 (49%)
Query: 57 WMPQEINMQRDIELWKNPIGLTEEERRLVKRNLGFFSTADSLAANNIVLGTYRHITAPEC 116
W P+E+++ +D W++ LT+ E+ + NL + + DS+AA ++ ++ PE
Sbjct: 49 WRPEEVDVSKDRADWQS---LTDSEKHIFISNLKYQTLLDSMAARSVNAVLLPLVSLPEV 105
Query: 117 RQYLLRQAFEEAIHTHAYQYIVESLGLDELEIFNAYHEIKSIRDKDEFLIPFID--VLTD 174
++ AF E IH+ +Y +I+ +L + EIF+ +I + + F D +LT
Sbjct: 106 ETWVETWAFSETIHSRSYTHILRNLFTEPGEIFDDIIVNPAILKRASSIAKFFDDVILTT 165
Query: 175 LKFKT---------GNTK--NDQKLLKSLIVFAC---IMEGLFFYVGFVQILALGRQNKM 220
++ G T + +KL + L + C +E + FYV F A + +
Sbjct: 166 QLLQSQGEGTYEVEGKTVEVSTRKLKERLFLAVCSVNALEAIRFYVSFACSFAFAERELL 225
Query: 221 IGSSELYQYILRDESMH 237
G++++ + I RDE++H
Sbjct: 226 EGNAKIIKLIARDEALH 242
Score = 166 (63.5 bits), Expect = 9.9e-10, P = 9.9e-10
Identities = 46/173 (26%), Positives = 83/173 (47%)
Query: 186 QKLLKSLIVFAC---IMEGLFFYVGFVQILALGRQNKMIGSSELYQYILRDESMHCNFGI 242
+KL + L + C +E + FYV F A + + G++++ + I RDE++H
Sbjct: 188 RKLKERLFLAVCSVNALEAIRFYVSFACSFAFAERELLEGNAKIIKLIARDEALHLTGTQ 247
Query: 243 DLINTIKM--ENPNLW--TTEFCKEIEQLFLKAIELEYYYAEDTMPKG-ILGLNVKTFKS 297
++N + ++P + + E E Q+FL +E E +A+ G ++GLN
Sbjct: 248 HILNNWRSGKDDPEMKIISEELRDEGLQIFLDVVEQEKEWAQYLFKDGSMIGLNADILNQ 307
Query: 298 YLRFIANCRMKQIGIKQIFPYERNPFPWMSE-MIHIKKESNFFETRVMEYQSG 349
Y+ +I+N R+ IG F + NP PWM+ ++ + ET + Y G
Sbjct: 308 YIEYISNQRLTAIGFGAPFDIKSNPLPWMNAYLVSDNVQVAPQETEISSYLVG 360
>UNIPROTKB|Q9KSK1 [details] [associations]
symbol:VC1255 "Ribonucleoside-diphosphate reductase, beta
subunit" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0004748 "ribonucleoside-diphosphate reductase activity,
thioredoxin disulfide as acceptor" evidence=ISS] [GO:0009265
"2'-deoxyribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR000358 InterPro:IPR009078 InterPro:IPR012348
Pfam:PF00268 PROSITE:PS00368 GenomeReviews:AE003852_GR
GO:GO:0046914 SUPFAM:SSF47240 Gene3D:1.10.620.20 GO:GO:0009265
GO:GO:0005971 GO:GO:0004748 GO:GO:0009186 PANTHER:PTHR23409
KO:K00526 OMA:LEPMFLG ProtClustDB:PRK09101 HSSP:P00453
EMBL:AE004204 PIR:D82223 RefSeq:NP_230900.2
ProteinModelPortal:Q9KSK1 SMR:Q9KSK1 DNASU:2614692 GeneID:2614692
KEGG:vch:VC1255 PATRIC:20081590 Uniprot:Q9KSK1
Length = 389
Score = 169 (64.5 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 46/155 (29%), Positives = 79/155 (50%)
Query: 179 TGNTKNDQKLLKSLIVFACIMEGLFFYVGFVQILALGRQNKMIGSSELYQYILRDESMHC 238
T + K +K L ++ +E + FYV F A + M G++++ + I RDE++H
Sbjct: 196 TVSLKELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIKLIARDEALHL 255
Query: 239 NFGIDLINTIK--MENPN-LWTTEFCK-EIEQLFLKAIELEYYYAEDTMPKG-ILGLNVK 293
++N ++ M++ L E CK E LF +A E E +AE G ++GLN
Sbjct: 256 TGTQHMLNLLRNGMDDFTFLQVAEECKQESFDLFKEAAEQEKEWAEYLFKDGSMIGLNKD 315
Query: 294 TFKSYLRFIANCRMKQIGIKQIFPYE-RNPFPWMS 327
Y+ +I N RM+ +G++ +P NP PW++
Sbjct: 316 ILCQYVEYITNIRMQAVGLEPAYPAATNNPIPWIN 350
Score = 158 (60.7 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 51/227 (22%), Positives = 106/227 (46%)
Query: 57 WMPQEINMQRD-IELWKNPIGLTEEERRLVKRNLGFFSTADSLAANNIVLGTYRHITAPE 115
W P+E+++ D I+ K P + E+ + NL + + DS+ + + ++ PE
Sbjct: 61 WRPEEVDVSSDRIDYGKLP----DHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSLPE 116
Query: 116 CRQYLLRQAFEEAIHTHAYQYIVESLGLDELEIFNAY----HEIKSIRDKDEFLIPFIDV 171
++ +F E IH+ +Y +I+ ++ D +F+ H IK +D + I++
Sbjct: 117 LETWIETWSFSETIHSRSYTHIIRNIVNDPAVVFDDIVENEHIIKRAKDIAHYYDDLIEL 176
Query: 172 LTDL-KFKTGNTK-NDQKL---LKSLI--VFACIM-----EGLFFYVGFVQILALGRQNK 219
D ++ G + N + + LK L ++ C+M E + FYV F A +
Sbjct: 177 TNDYHRYGEGQHQINGETITVSLKELKKKLYLCLMSVNALEAIRFYVSFACSFAFAEREL 236
Query: 220 MIGSSELYQYILRDESMHCNFGIDLINTIKMENPNLWTTEFCKEIEQ 266
M G++++ + I RDE++H ++N ++ + + +E +Q
Sbjct: 237 MEGNAKIIKLIARDEALHLTGTQHMLNLLRNGMDDFTFLQVAEECKQ 283
>TIGR_CMR|VC_1255 [details] [associations]
symbol:VC_1255 "ribonucleoside-diphosphate reductase, beta
subunit" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=ISS] [GO:0009265
"2'-deoxyribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR000358 InterPro:IPR009078 InterPro:IPR012348
Pfam:PF00268 PROSITE:PS00368 GenomeReviews:AE003852_GR
GO:GO:0046914 SUPFAM:SSF47240 Gene3D:1.10.620.20 GO:GO:0009265
GO:GO:0005971 GO:GO:0004748 GO:GO:0009186 PANTHER:PTHR23409
KO:K00526 OMA:LEPMFLG ProtClustDB:PRK09101 HSSP:P00453
EMBL:AE004204 PIR:D82223 RefSeq:NP_230900.2
ProteinModelPortal:Q9KSK1 SMR:Q9KSK1 DNASU:2614692 GeneID:2614692
KEGG:vch:VC1255 PATRIC:20081590 Uniprot:Q9KSK1
Length = 389
Score = 169 (64.5 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 46/155 (29%), Positives = 79/155 (50%)
Query: 179 TGNTKNDQKLLKSLIVFACIMEGLFFYVGFVQILALGRQNKMIGSSELYQYILRDESMHC 238
T + K +K L ++ +E + FYV F A + M G++++ + I RDE++H
Sbjct: 196 TVSLKELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIKLIARDEALHL 255
Query: 239 NFGIDLINTIK--MENPN-LWTTEFCK-EIEQLFLKAIELEYYYAEDTMPKG-ILGLNVK 293
++N ++ M++ L E CK E LF +A E E +AE G ++GLN
Sbjct: 256 TGTQHMLNLLRNGMDDFTFLQVAEECKQESFDLFKEAAEQEKEWAEYLFKDGSMIGLNKD 315
Query: 294 TFKSYLRFIANCRMKQIGIKQIFPYE-RNPFPWMS 327
Y+ +I N RM+ +G++ +P NP PW++
Sbjct: 316 ILCQYVEYITNIRMQAVGLEPAYPAATNNPIPWIN 350
Score = 158 (60.7 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 51/227 (22%), Positives = 106/227 (46%)
Query: 57 WMPQEINMQRD-IELWKNPIGLTEEERRLVKRNLGFFSTADSLAANNIVLGTYRHITAPE 115
W P+E+++ D I+ K P + E+ + NL + + DS+ + + ++ PE
Sbjct: 61 WRPEEVDVSSDRIDYGKLP----DHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSLPE 116
Query: 116 CRQYLLRQAFEEAIHTHAYQYIVESLGLDELEIFNAY----HEIKSIRDKDEFLIPFIDV 171
++ +F E IH+ +Y +I+ ++ D +F+ H IK +D + I++
Sbjct: 117 LETWIETWSFSETIHSRSYTHIIRNIVNDPAVVFDDIVENEHIIKRAKDIAHYYDDLIEL 176
Query: 172 LTDL-KFKTGNTK-NDQKL---LKSLI--VFACIM-----EGLFFYVGFVQILALGRQNK 219
D ++ G + N + + LK L ++ C+M E + FYV F A +
Sbjct: 177 TNDYHRYGEGQHQINGETITVSLKELKKKLYLCLMSVNALEAIRFYVSFACSFAFAEREL 236
Query: 220 MIGSSELYQYILRDESMHCNFGIDLINTIKMENPNLWTTEFCKEIEQ 266
M G++++ + I RDE++H ++N ++ + + +E +Q
Sbjct: 237 MEGNAKIIKLIARDEALHLTGTQHMLNLLRNGMDDFTFLQVAEECKQ 283
>UNIPROTKB|P0C701 [details] [associations]
symbol:BaRF1 "Ribonucleoside-diphosphate reductase small
chain" species:10376 "Human herpesvirus 4" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000358 InterPro:IPR009078
InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368 UniPathway:UPA00326
GO:GO:0006260 GO:GO:0046914 EMBL:AY961628 SUPFAM:SSF47240
Gene3D:1.10.620.20 GO:GO:0005971 GO:GO:0004748 GO:GO:0009186
PANTHER:PTHR23409 RefSeq:YP_401656.1 ProteinModelPortal:P0C701
IntAct:P0C701 GeneID:3783683 ProtClustDB:CLSP2509600 Uniprot:P0C701
Length = 302
Score = 163 (62.4 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 83/299 (27%), Positives = 123/299 (41%)
Query: 55 NHWMPQEINMQRDIELWKNPIGLTEEERRLVKRNLGFFSTADSLAANNI-VLGTYRHITA 113
N W I + +D K L E + K F + A+ L NI L T +
Sbjct: 23 NRWFAAHIVLTKDCGCLKL---LNERDLEFYKFLFTFLAMAEKLVNFNIDELVT--SFES 77
Query: 114 PECRQYLLRQAFEEAIHTHAYQYIVESLGLDELEIFNAYHEIKSIRDKDEFLIPFIDVLT 173
+ Y Q E +H Y I+ L + NAY E +I DE L I L
Sbjct: 78 HDIDHYYTEQKAMENVHGETYANILNMLFDGDRAAMNAYAE--AIM-ADEALQAKISWLR 134
Query: 174 DLKFKTGNTKNDQKLLKSLIVFACIMEGLFFYVGFVQILALGRQNKMIGSSELYQYILRD 233
D K T L + ++VF I EG+FF F I L + M G YI RD
Sbjct: 135 D-KVAAAVT-----LPEKILVFLLI-EGIFFISSFYSIALLRVRGLMPGICLANNYISRD 187
Query: 234 ESMHCNFGIDLIN--TIKMENPNL-WTTEFCKEIEQLFLKAIELEYYYAEDTMPKGILGL 290
E +H L N T K + P W I++LF A+E+E + E +G+ +
Sbjct: 188 ELLHTRAASLLYNSMTAKADRPRATW-------IQELFRTAVEVETAFIE-ARGEGVTLV 239
Query: 291 NVKTFKSYLRFIANCRMKQIGIKQIF---PYERNPFPWMSEMIHIKKESNFFETRVMEY 346
+V+ K +L A+ + IG ++ P + P +M+ + K++NFFE +Y
Sbjct: 240 DVRAIKQFLEATADRILGDIGQAPLYGTPPPKDCPLTYMTSI----KQTNFFEQESSDY 294
>UNIPROTKB|P69924 [details] [associations]
symbol:nrdB species:83333 "Escherichia coli K-12"
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0015949
"nucleobase-containing small molecule interconversion"
evidence=IDA] [GO:0004748 "ribonucleoside-diphosphate reductase
activity, thioredoxin disulfide as acceptor" evidence=IEA;IDA]
[GO:0005971 "ribonucleoside-diphosphate reductase complex"
evidence=IEA;IDA] [GO:0009263 "deoxyribonucleotide biosynthetic
process" evidence=IDA] [GO:0009186 "deoxyribonucleoside diphosphate
metabolic process" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IPI] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0005506 "iron ion binding"
evidence=IDA] InterPro:IPR000358 InterPro:IPR009078
InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368 UniPathway:UPA00326
GO:GO:0005829 GO:GO:0005506 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0006260
GO:GO:0015949 SUPFAM:SSF47240 Gene3D:1.10.620.20 GO:GO:0009263
EMBL:K02672 GO:GO:0005971 GO:GO:0004748 GO:GO:0009186 PDB:1R1R
PDB:2R1R PDB:2X0X PDB:2XAK PDB:2XAP PDB:2XAV PDB:2XAW PDB:2XAX
PDB:2XAY PDB:2XAZ PDB:2XO4 PDB:2XO5 PDB:3R1R PDB:3UUS PDB:4ERM
PDB:4ERP PDB:4R1R PDB:5R1R PDB:6R1R PDB:7R1R PDBsum:1R1R
PDBsum:2R1R PDBsum:2X0X PDBsum:2XAK PDBsum:2XAP PDBsum:2XAV
PDBsum:2XAW PDBsum:2XAX PDBsum:2XAY PDBsum:2XAZ PDBsum:2XO4
PDBsum:2XO5 PDBsum:3R1R PDBsum:3UUS PDBsum:4ERM PDBsum:4ERP
PDBsum:4R1R PDBsum:5R1R PDBsum:6R1R PDBsum:7R1R eggNOG:COG0208
PANTHER:PTHR23409 KO:K00526 PIR:A00527 RefSeq:NP_416738.1
RefSeq:YP_490474.1 PDB:1AV8 PDB:1BIQ PDB:1JPR PDB:1JQC PDB:1MRR
PDB:1MXR PDB:1PFR PDB:1PIM PDB:1PIU PDB:1PIY PDB:1PIZ PDB:1PJ0
PDB:1PJ1 PDB:1PM2 PDB:1R65 PDB:1RIB PDB:1RNR PDB:1RSR PDB:1RSV
PDB:1XIK PDB:1YFD PDB:2ALX PDB:2AV8 PDB:2XOF PDBsum:1AV8
PDBsum:1BIQ PDBsum:1JPR PDBsum:1JQC PDBsum:1MRR PDBsum:1MXR
PDBsum:1PFR PDBsum:1PIM PDBsum:1PIU PDBsum:1PIY PDBsum:1PIZ
PDBsum:1PJ0 PDBsum:1PJ1 PDBsum:1PM2 PDBsum:1R65 PDBsum:1RIB
PDBsum:1RNR PDBsum:1RSR PDBsum:1RSV PDBsum:1XIK PDBsum:1YFD
PDBsum:2ALX PDBsum:2AV8 PDBsum:2XOF ProteinModelPortal:P69924
SMR:P69924 DIP:DIP-36213N IntAct:P69924 MINT:MINT-1269534
PRIDE:P69924 EnsemblBacteria:EBESCT00000003830
EnsemblBacteria:EBESCT00000015940 GeneID:12931498 GeneID:946732
KEGG:ecj:Y75_p2197 KEGG:eco:b2235 PATRIC:32119829 EchoBASE:EB0655
EcoGene:EG10661 HOGENOM:HOG000278087 OMA:LEPMFLG
ProtClustDB:PRK09101 BioCyc:EcoCyc:NRDB-MONOMER
BioCyc:ECOL316407:JW2229-MONOMER BioCyc:MetaCyc:NRDB-MONOMER
SABIO-RK:P69924 EvolutionaryTrace:P69924 Genevestigator:P69924
Uniprot:P69924
Length = 376
Score = 164 (62.8 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 44/152 (28%), Positives = 78/152 (51%)
Query: 186 QKLLKSLIVFACIM-----EGLFFYVGFVQILALGRQNKMIGSSELYQYILRDESMHCNF 240
++L K L + C+M E + FYV F A + M G++++ + I RDE++H
Sbjct: 188 RELKKKL--YLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTG 245
Query: 241 GIDLINTIKM--ENPNLWT-TEFCK-EIEQLFLKAIELEYYYAEDTMPKG-ILGLNVKTF 295
++N ++ ++P + E CK E LF++A + E +A+ G ++GLN
Sbjct: 246 TQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDIL 305
Query: 296 KSYLRFIANCRMKQIGIKQIFPYERNPFPWMS 327
Y+ +I N RM+ +G+ F NP PW++
Sbjct: 306 CQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337
Score = 158 (60.7 bits), Expect = 8.2e-09, P = 8.2e-09
Identities = 52/226 (23%), Positives = 105/226 (46%)
Query: 57 WMPQEINMQRDIELWKNPIGLTEEERRLVKRNLGFFSTADSLAANNIVLGTYRHITAPEC 116
W P+E+++ RD ++ L E E+ + NL + + DS+ + + I+ PE
Sbjct: 49 WRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPEL 105
Query: 117 RQYLLRQAFEEAIHTHAYQYIVESLGLDELEIFNAYHEIKSIRDKDEFLIPFIDVLTDLK 176
++ AF E IH+ +Y +I+ ++ D +F+ + I+ + E + + D L ++
Sbjct: 106 ETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMT 165
Query: 177 -----FKTG-NTKNDQKLLKSLI-----VFACIM-----EGLFFYVGFVQILALGRQNKM 220
G +T N + + SL ++ C+M E + FYV F A + M
Sbjct: 166 SYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELM 225
Query: 221 IGSSELYQYILRDESMHCNFGIDLINTIKMENPNLWTTEFCKEIEQ 266
G++++ + I RDE++H ++N ++ + E +E +Q
Sbjct: 226 EGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQ 271
>UNIPROTKB|Q50549 [details] [associations]
symbol:nrdF2 "Ribonucleoside-diphosphate reductase subunit
beta nrdF2" species:1773 "Mycobacterium tuberculosis" [GO:0005515
"protein binding" evidence=IPI] [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=IDA]
[GO:0006260 "DNA replication" evidence=IMP] [GO:0009263
"deoxyribonucleotide biosynthetic process" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] InterPro:IPR000358
InterPro:IPR009078 InterPro:IPR012348 InterPro:IPR026023
InterPro:IPR026494 Pfam:PF00268 PIRSF:PIRSF000355 PROSITE:PS00368
UniPathway:UPA00326 GO:GO:0040007 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0006260
GO:GO:0046914 EMBL:BX842581 SUPFAM:SSF47240 Gene3D:1.10.620.20
GO:GO:0009263 GO:GO:0005971 GO:GO:0004748 GO:GO:0009186
eggNOG:COG0208 PANTHER:PTHR23409 EMBL:U41100 PIR:C70861
RefSeq:NP_337650.1 RefSeq:YP_006516508.1 RefSeq:YP_177921.1
PDB:1UZR PDBsum:1UZR ProteinModelPortal:Q50549 SMR:Q50549
PRIDE:Q50549 EnsemblBacteria:EBMYCT00000001867
EnsemblBacteria:EBMYCT00000069712 GeneID:13317851 GeneID:888886
GeneID:922702 KEGG:mtc:MT3133 KEGG:mtu:Rv3048c KEGG:mtv:RVBD_3048c
PATRIC:18128652 TubercuList:Rv3048c HOGENOM:HOG000246153 KO:K00526
OMA:IGYKYQR ProtClustDB:PRK13966 EvolutionaryTrace:Q50549
TIGRFAMs:TIGR04171 Uniprot:Q50549
Length = 324
Score = 156 (60.0 bits), Expect = 9.5e-09, P = 9.5e-09
Identities = 65/313 (20%), Positives = 132/313 (42%)
Query: 55 NHWMPQEINMQRDIELWKNPIGLTEEERRLVKRNLGFFSTADSLAANNIVLGTYRHITAP 114
N W+P+++ + DI W LT E++L R + D++ + P
Sbjct: 34 NFWLPEKVPVSNDIPSWGT---LTAGEKQLTMRVFTGLTMLDTIQGTVGAVSLIPDALTP 90
Query: 115 ECRQYLLRQAFEEAIHTHAYQYIVESLGLDELEIFNAYH---EIKSIRDKDEFLIPFIDV 171
L AF E++H +Y I +L EI +A+ E ++++ K E ++ +
Sbjct: 91 HEEAVLTNIAFMESVHAKSYSQIFSTL-CSTAEIDDAFRWSEENRNLQRKAEIVLQYY-- 147
Query: 172 LTDLKFKTGNTKNDQKLLKSLIVFACIMEGLFFYVGFVQILALGRQNKMIGSSELYQYIL 231
+ D+ L + V + ++E FY GF + + K+ ++++ + I+
Sbjct: 148 -----------RGDEPLKRK--VASTLLESFLFYSGFYLPMYWSSRAKLTNTADMIRLII 194
Query: 232 RDESMHCNF-GIDLINTIKMENPNLWTTEFCKEIEQLFLKAIELEYYYAEDTMPKGILGL 290
RDE++H + G + + + ++ E +L + + E Y +D + +GL
Sbjct: 195 RDEAVHGYYIGYKFQRGLALVD-DVTRAELKDYTYELLFELYDNEVEYTQDLYDE--VGL 251
Query: 291 NVKTFKSYLRFIANCRMKQIGIKQIFPYER---NPFPWMSEMIHIKKESNFFETRVMEYQ 347
+ K +LR+ AN + +G + +FP + NP + + + +FF Y
Sbjct: 252 T-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENHDFFSGSGSSYV 310
Query: 348 SGGTL-----DWE 355
G + DW+
Sbjct: 311 IGKAVVTEDDDWD 323
>SGD|S000003412 [details] [associations]
symbol:RNR4 "Ribonucleotide-diphosphate reductase (RNR) small
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0046914
"transition metal ion binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=IEA;IGI;IMP;IDA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005971 "ribonucleoside-diphosphate reductase complex"
evidence=IEA;IDA;IPI] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0051188 "cofactor biosynthetic process" evidence=IMP;IPI]
[GO:0009263 "deoxyribonucleotide biosynthetic process"
evidence=IDA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0009186 "deoxyribonucleoside diphosphate metabolic process"
evidence=IEA] InterPro:IPR000358 InterPro:IPR009078
InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368 UniPathway:UPA00326
SGD:S000003412 GO:GO:0005634 EMBL:BK006941 GO:GO:0006260
GO:GO:0046914 SUPFAM:SSF47240 RefSeq:NP_011696.3 GeneID:853091
KEGG:sce:YGR180C KO:K10808 Gene3D:1.10.620.20 GO:GO:0009263
RefSeq:NP_011703.3 GeneID:853099 KEGG:sce:YGR187C GO:GO:0051188
GO:GO:0005971 GO:GO:0004748 GO:GO:0009186 PDB:1ZZD PDBsum:1ZZD
eggNOG:COG0208 HOGENOM:HOG000255975 PANTHER:PTHR23409 PDB:1JK0
PDBsum:1JK0 EMBL:U30385 EMBL:Z72965 EMBL:AY723819 PIR:S59744
PDB:1SMS PDBsum:1SMS DisProt:DP00488 ProteinModelPortal:P49723
SMR:P49723 DIP:DIP-5381N IntAct:P49723 MINT:MINT-537732
STRING:P49723 PaxDb:P49723 PeptideAtlas:P49723 EnsemblFungi:YGR180C
CYGD:YGR180c OrthoDB:EOG4DZ55B EvolutionaryTrace:P49723
NextBio:973076 Genevestigator:P49723 GermOnline:YGR180C
Uniprot:P49723
Length = 345
Score = 150 (57.9 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 57/215 (26%), Positives = 105/215 (48%)
Query: 150 NAYHEIKSIR-D---KDEFLIP-FIDV--LTDLKFKTGNTK----NDQKLL-KSLIVFAC 197
N Y E+ S+ D KD IP F ++ L ++K K + ND L + L+ FA
Sbjct: 125 NIYSEVYSMMVDAFFKDPKNIPLFKEIANLPEVKHKAAFIERWISNDDSLYAERLVAFAA 184
Query: 198 IMEGLFFYVGFVQILALGRQNKMIGSSELYQYILRDESMHCNFGIDLINTIKMENPNLWT 257
EG+F + + L + M G + + I RD + +F L ++ + PN
Sbjct: 185 -KEGIFQAGNYASMFWLTDKKIMPGLAMANRNICRDRGAYTDFSCLLFAHLRTK-PNP-- 240
Query: 258 TEFCKEIEQLFLKAIELEYYYAEDTMPKGILGLNVKTFKSYLRFIANCRMKQIGIKQIFP 317
K IE++ +A+E+E Y +++P G+++K+ +Y+ F+A+ ++ G ++ +
Sbjct: 241 ----KIIEKIITEAVEIEKEYYSNSLPVEKFGMDLKSIHTYIEFVADGLLQGFGNEKYYN 296
Query: 318 YERNPFPWMSEMIHIKKESNFFETRVMEYQSGGTL 352
NPF +M ++ K + FFE +V +YQ +
Sbjct: 297 AV-NPFEFMEDVATAGK-TTFFEKKVSDYQKASDM 329
Score = 123 (48.4 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 47/223 (21%), Positives = 94/223 (42%)
Query: 37 LVPFKYNWAWDRYLSSCANHWMPQEINMQRDIELWKNPIGLTEEERRLVKRNLGFFSTAD 96
+ P KY+ W Y A+ W +EI + +D E ++ LT++++ + L ++D
Sbjct: 37 MFPIKYHEIWAAYKKVEASFWTAEEIELAKDTEDFQK---LTDDQKTYIGNLLALSISSD 93
Query: 97 SLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIVESLGLD--ELEIFNAYHE 154
+L ++ + PE + + Q E I++ Y +V++ D + +F
Sbjct: 94 NLVNKYLIENFSAQLQNPEGKSFYGFQIMMENIYSEVYSMMVDAFFKDPKNIPLFKEIAN 153
Query: 155 IKSIRDKDEFLIPFIDVLTDLKFKTGNTKNDQKLL-KSLIVFACIMEGLFFYVGFVQILA 213
+ ++ K F+ +I ND L + L+ FA EG+F + +
Sbjct: 154 LPEVKHKAAFIERWIS-------------NDDSLYAERLVAFAA-KEGIFQAGNYASMFW 199
Query: 214 LGRQNKMIGSSELYQYILRDESMHCNFGIDLINTIKME-NPNL 255
L + M G + + I RD + +F L ++ + NP +
Sbjct: 200 LTDKKIMPGLAMANRNICRDRGAYTDFSCLLFAHLRTKPNPKI 242
>WB|WBGene00017610 [details] [associations]
symbol:F19G12.2 species:6239 "Caenorhabditis elegans"
[GO:0004748 "ribonucleoside-diphosphate reductase activity,
thioredoxin disulfide as acceptor" evidence=IEA] [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=IEA]
[GO:0009186 "deoxyribonucleoside diphosphate metabolic process"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0019915 "lipid storage" evidence=IMP] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR000358
InterPro:IPR009078 InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368
GO:GO:0046914 GO:GO:0006974 GO:GO:0019915 SUPFAM:SSF47240
Gene3D:1.10.620.20 GO:GO:0005971 GO:GO:0004748 GO:GO:0009186
eggNOG:COG0208 PANTHER:PTHR23409 GeneTree:ENSGT00390000013305
KO:K00526 HOGENOM:HOG000113979 EMBL:FO081182 PIR:T29884
RefSeq:NP_508269.1 UniGene:Cel.26506 HSSP:P11157
ProteinModelPortal:Q19599 SMR:Q19599 STRING:Q19599
EnsemblMetazoa:F19G12.2 GeneID:184692 KEGG:cel:CELE_F19G12.2
UCSC:F19G12.2 CTD:184692 WormBase:F19G12.2 InParanoid:Q19599
OMA:KFLIEAY NextBio:925670 Uniprot:Q19599
Length = 668
Score = 154 (59.3 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 45/159 (28%), Positives = 80/159 (50%)
Query: 192 LIVFACIMEGLFFYVGFVQILALGRQNKMIG---SSELYQYILRDESMHCNFGIDLINTI 248
L FA + EG+FF F I L ++ + G S+EL L +H N N
Sbjct: 504 LAAFAAV-EGIFFSSSFAAIFWLKKRGLLPGLTHSNELISMFL----LHPNCFFSTFNLQ 558
Query: 249 KMENPNLWTTEFCKEIEQLFLKAIELEYYYAEDTMPKGILGLNVKTFKSYLRFIANCRMK 308
+ P E I ++ +++ +E + +++P ++G+N Y+ F+A+ ++
Sbjct: 559 RRRKP----AE--SRITEIINESVLVEQDFVRESLPTNLIGMNQHMMCKYVEFVADLLLE 612
Query: 309 QIGIKQIFPYERNPFPWMSEMIHIKKESNFFETRVMEYQ 347
++G + + +NPF +M E I I+ ++NFFE RV EYQ
Sbjct: 613 ELGYSKRYN-TKNPFDFM-ENISIEGKTNFFEKRVSEYQ 649
>UNIPROTKB|P37146 [details] [associations]
symbol:nrdF species:83333 "Escherichia coli K-12"
[GO:0005737 "cytoplasm" evidence=ISA] [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=IEA;IGI] [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=IEA;IGI]
[GO:0009263 "deoxyribonucleotide biosynthetic process"
evidence=IEA;IGI] [GO:0005506 "iron ion binding" evidence=ISA]
[GO:0009186 "deoxyribonucleoside diphosphate metabolic process"
evidence=IEA] [GO:0030145 "manganese ion binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR000358 InterPro:IPR009078
InterPro:IPR012348 InterPro:IPR026023 InterPro:IPR026494
Pfam:PF00268 PIRSF:PIRSF000355 PROSITE:PS00368 UniPathway:UPA00326
GO:GO:0005506 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006260 GO:GO:0030145 SUPFAM:SSF47240
Gene3D:1.10.620.20 GO:GO:0009263 PDB:3N39 PDB:3N3A PDB:3N3B
PDBsum:3N39 PDBsum:3N3A PDBsum:3N3B GO:GO:0005971 GO:GO:0004748
EMBL:M24856 GO:GO:0009186 eggNOG:COG0208 PANTHER:PTHR23409
HOGENOM:HOG000246153 KO:K00526 TIGRFAMs:TIGR04171 PIR:E65047
RefSeq:NP_417162.1 RefSeq:YP_490891.1 PDB:3N37 PDB:3N38 PDBsum:3N37
PDBsum:3N38 ProteinModelPortal:P37146 SMR:P37146 DIP:DIP-374N
IntAct:P37146 PRIDE:P37146 EnsemblBacteria:EBESCT00000000726
EnsemblBacteria:EBESCT00000015330 GeneID:12933275 GeneID:947149
KEGG:ecj:Y75_p2619 KEGG:eco:b2676 PATRIC:32120742 EchoBASE:EB2283
EcoGene:EG12381 OMA:YYQADEP ProtClustDB:PRK09614
BioCyc:EcoCyc:NRDF-MONOMER BioCyc:ECOL316407:JW2651-MONOMER
BioCyc:MetaCyc:NRDF-MONOMER EvolutionaryTrace:P37146
Genevestigator:P37146 Uniprot:P37146
Length = 319
Score = 144 (55.7 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 68/308 (22%), Positives = 126/308 (40%)
Query: 54 ANHWMPQEINMQRDIELWKNPIGLTEEERRLVKRNLGFFSTADSLAANNIV--LGTYRHI 111
+N W+P+++ + DI W+ LT E++L R + D+L N++
Sbjct: 28 SNFWLPEKVPLSNDIPAWQT---LTVVEQQLTMRVFTGLTLLDTL--QNVIGAPSLMPDA 82
Query: 112 TAPECRQYLLRQAFEEAIHTHAYQYIVESLGLDELEIFNAYHEIKSIRDKDEFLIPFIDV 171
P L +F EA+H +Y I +L ++ AY + +++ L +
Sbjct: 83 LTPHEEAVLSNISFMEAVHARSYSSIFSTL-CQTKDVDAAY----AWSEENAPLQRKAQI 137
Query: 172 LTDLKFKTGNTKNDQKLLKSLIVFACIMEGLFFYVGFVQILALGRQNKMIGSSELYQYIL 231
+ + + D L K + + +E FY GF + + K+ +++L + I+
Sbjct: 138 IQQ------HYRGDDPLKKKIA--SVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLII 189
Query: 232 RDESMHCNFGIDLINTIKMENPNLWTTEFCKEIE-QLFLKAIELEYYYAEDTMPKGILGL 290
RDE++H + I ME +L E K L L+ + E Y ++ +
Sbjct: 190 RDEAVH-GYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPWAD 248
Query: 291 NVKTFKSYLRFIANCRMKQIGIKQIFPYER---NPFPWMSEMIHIKKESNFFETRVMEYQ 347
+VK F Y AN + +G + +FP E NP + + + +FF Y
Sbjct: 249 DVKAFLCYN---ANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYV 305
Query: 348 SGGTLDWE 355
G ++ E
Sbjct: 306 MGKAVETE 313
>DICTYBASE|DDB_G0291764 [details] [associations]
symbol:DDB_G0291764 "ribonucleotide
reductase-related" species:44689 "Dictyostelium discoideum"
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0046914
"transition metal ion binding" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0009186
"deoxyribonucleoside diphosphate metabolic process" evidence=IEA]
[GO:0005971 "ribonucleoside-diphosphate reductase complex"
evidence=IEA] [GO:0004748 "ribonucleoside-diphosphate reductase
activity, thioredoxin disulfide as acceptor" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR000358 InterPro:IPR009078
InterPro:IPR012348 Pfam:PF00268 dictyBase:DDB_G0291764
GO:GO:0046914 EMBL:AAFI02000182 SUPFAM:SSF47240 Gene3D:1.10.620.20
GO:GO:0005971 GO:GO:0004748 GO:GO:0009186 eggNOG:COG0208
PANTHER:PTHR23409 RefSeq:XP_629985.1 ProteinModelPortal:Q54E77
SMR:Q54E77 EnsemblProtists:DDB0238223 GeneID:8628315
KEGG:ddi:DDB_G0291764 Uniprot:Q54E77
Length = 257
Score = 113 (44.8 bits), Expect = 0.00045, P = 0.00045
Identities = 46/187 (24%), Positives = 83/187 (44%)
Query: 46 WDRYLSSCANHWMPQEINMQRDIELWKNPIGLTEEERRLVKRNLGFFSTADSLAANNIVL 105
W Y + AN W+ +EI D W+ LT +ER L FF + + N+
Sbjct: 88 WKMYKKTLANQWVVEEIESSDDGLDWEKK--LTNDERDFFSNVLAFFVASCGIINKNLNR 145
Query: 106 GTYRHITAPECRQYLLRQAFEEAIHTHAYQYIVESLGLDEL---EIFNAYHEIKSIRDKD 162
+ + PE + + Q + +H+ Y ++E+ D+ ++FNA I ++ K
Sbjct: 146 FMSK-VQIPEAKCFYNYQIHIKYLHSETYSLLIETCIKDKNIKDKLFNAIETIPCVKKKA 204
Query: 163 EFLIPFIDVLTDLKFKTGNTKNDQKLLKSLIVFACIMEGLFFYVGFVQILALGRQNKMIG 222
E+ + +I+ ++ +K L +L+ F E +FF F I L +++ M G
Sbjct: 205 EWALKWIN------------ESFEKRLVALVAF----ESIFFSGSFRIISLLKKRSLMQG 248
Query: 223 ---SSEL 226
S+EL
Sbjct: 249 LTFSNEL 255
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.139 0.425 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 355 342 0.00096 116 3 11 22 0.49 33
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 58
No. of states in DFA: 620 (66 KB)
Total size of DFA: 257 KB (2137 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 29.96u 0.08s 30.04t Elapsed: 00:00:05
Total cpu time: 29.98u 0.08s 30.06t Elapsed: 00:00:05
Start: Thu Aug 15 11:46:22 2013 End: Thu Aug 15 11:46:27 2013