BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8873
(841 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9NB32|TCPD_AEDTR T-complex protein 1 subunit delta OS=Aedes triseriatus PE=2 SV=1
Length = 533
Score = 732 bits (1890), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/484 (74%), Positives = 412/484 (85%), Gaps = 33/484 (6%)
Query: 358 ILVELSKAQDIEAGDGTTSVVIVAGSLLEAAEKLLHKGIHPTTISDAFQKAAAKCVEILT 417
+LVELS+AQD+EAGDGTTSVV+VAG+LL+A EKLL GIHPT ISDAFQK +AK V+ILT
Sbjct: 83 MLVELSRAQDVEAGDGTTSVVVVAGALLKAVEKLLQMGIHPTAISDAFQKCSAKAVDILT 142
Query: 418 EMSTPITLADRENLIKSAATSLNSKVVSQQASLLAPIAVDAVLKVVNPQRDTNVDLKDIK 477
EMSTPI L DRE+L+KSA+TSLNSKVVSQ +S LAPIAV+AVLKV ++ VDLK++K
Sbjct: 143 EMSTPIELTDRESLVKSASTSLNSKVVSQHSSQLAPIAVEAVLKVTEAGHESGVDLKNVK 202
Query: 478 VIRKLGGTVEDTELVDGLVFTQKSANVNGPKRVEKAKIGLIQFCISPPKTDMDHKVVVSD 537
+IR LGGT++DTELVDGLVFTQ+S VNGPKRVEKAKIGLIQFCIS PKTDMDH V+VSD
Sbjct: 203 IIRSLGGTIDDTELVDGLVFTQRSCGVNGPKRVEKAKIGLIQFCISAPKTDMDHSVIVSD 262
Query: 538 YSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKIKVLVVKDI 597
Y+AMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDA+SDLA+HFLDKIKV+VVKDI
Sbjct: 263 YAAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAVSDLAMHFLDKIKVMVVKDI 322
Query: 598 EREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISGIQNPGRTLTVV 657
E EDIEFVCKTLN RPIASLDHFLPEHL +ADLVEE+ +G+S+FVK++GIQN G+T+++V
Sbjct: 323 EHEDIEFVCKTLNCRPIASLDHFLPEHLVNADLVEEVSSGSSKFVKVTGIQNMGQTVSIV 382
Query: 658 VRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYADTVSGIDAY 717
VRGSNKLVL+EA RSLHDALCVVRCLVK+RA IAGGGAPEIE++++L +A T+ G+DAY
Sbjct: 383 VRGSNKLVLEEAERSLHDALCVVRCLVKKRAQIAGGGAPEIEMAIQLAAHAQTLEGVDAY 442
Query: 718 CFRALIAGGGAPEIELSLKLTKYADTVSGIDAYCFRAFAQALEVIPLTLAENAGLNPIST 777
C FRAFA ALEVIP TLAENAGLNPI+T
Sbjct: 443 C---------------------------------FRAFANALEVIPSTLAENAGLNPIAT 469
Query: 778 VTELRNRHAQGETTTGINVRKGAITNILEENVVQPLLVSTSAITLSTETVRSILKIDDIV 837
VTELRNRHAQGE GINVRKGAIT+IL ENVVQPLLVSTS+ITL++ETVRSILKIDDI+
Sbjct: 470 VTELRNRHAQGEKNAGINVRKGAITDILAENVVQPLLVSTSSITLASETVRSILKIDDII 529
Query: 838 NTLN 841
NT+
Sbjct: 530 NTMQ 533
Score = 482 bits (1240), Expect = e-135, Method: Compositional matrix adjust.
Identities = 227/276 (82%), Positives = 258/276 (93%)
Query: 84 MDHKVVVSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDK 143
MDH V+VSDY+AMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDA+SDLA+HFLDK
Sbjct: 254 MDHSVIVSDYAAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAVSDLAMHFLDK 313
Query: 144 IKVLVVKDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISGIQ 203
IKV+VVKDIE EDIEFVCKTLN RPIASLDHFLPEHL +ADLVEE+ +G+S+FVK++GIQ
Sbjct: 314 IKVMVVKDIEHEDIEFVCKTLNCRPIASLDHFLPEHLVNADLVEEVSSGSSKFVKVTGIQ 373
Query: 204 NPGRTLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYA 263
N G+T+++VVRGSNKLVL+EA RSLHDALCVVRCLVK+RA IAGGGAPEIE++++L +A
Sbjct: 374 NMGQTVSIVVRGSNKLVLEEAERSLHDALCVVRCLVKKRAQIAGGGAPEIEMAIQLAAHA 433
Query: 264 DTVSGIDAYCFRAFAQALEVIPLTLAENAGLNPISTVTELRNRHAQGETTTGINVRKGAI 323
T+ G+DAYCFRAFA ALEVIP TLAENAGLNPI+TVTELRNRHAQGE GINVRKGAI
Sbjct: 434 QTLEGVDAYCFRAFANALEVIPSTLAENAGLNPIATVTELRNRHAQGEKNAGINVRKGAI 493
Query: 324 TNILEENVVQPLLVSTSAITLSTETVRSILKIDDIL 359
T+IL ENVVQPLLVSTS+ITL++ETVRSILKIDDI+
Sbjct: 494 TDILAENVVQPLLVSTSSITLASETVRSILKIDDII 529
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/84 (75%), Positives = 69/84 (82%)
Query: 1 MTVNASGDSKNSKSSAFKDKSKATDIRNSNIGAAKAVADAIRTSLGPRGMDKMIQASNGE 60
M V + + A+KDKSK DIR SNI AAKAV+DAIRTSLGPRGMDKMIQA+NGE
Sbjct: 1 MVVKPAARGMKPQGQAYKDKSKPADIRQSNINAAKAVSDAIRTSLGPRGMDKMIQAANGE 60
Query: 61 VTITNDGATILKQMNVIHPAAKMM 84
VTITNDGATILKQMNVIHPAAKM+
Sbjct: 61 VTITNDGATILKQMNVIHPAAKML 84
>sp|Q2T9X2|TCPD_BOVIN T-complex protein 1 subunit delta OS=Bos taurus GN=CCT4 PE=1 SV=3
Length = 542
Score = 664 bits (1714), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/483 (67%), Positives = 400/483 (82%), Gaps = 35/483 (7%)
Query: 358 ILVELSKAQDIEAGDGTTSVVIVAGSLLEAAEKLLHKGIHPTTISDAFQKAAAKCVEILT 417
+LVELSKAQDIEAGDGTTSVVI+AGSLL++ KLL KGIHPT IS++FQKA K +EILT
Sbjct: 93 MLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILT 152
Query: 418 EMSTPITLADRENLIKSAATSLNSKVVSQQASLLAPIAVDAVLKVVNPQRDTNVDLKDIK 477
+MS P L+DRE L+ SAATSLNSKVVSQ +SLL+P++VDAV+KV++P T+VDL+DIK
Sbjct: 153 DMSRPEELSDRETLLNSAATSLNSKVVSQYSSLLSPMSVDAVMKVIDPATATSVDLRDIK 212
Query: 478 VIRKLGGTVEDTELVDGLVFTQKSANVNGPKRVEKAKIGLIQFCISPPKTDMDHKVVVSD 537
+++KLGGT++D ELV+GLV TQK AN +G RVEKAKIGLIQFC+S PKTDMD+++VVSD
Sbjct: 213 IVKKLGGTIDDCELVEGLVLTQKVAN-SGITRVEKAKIGLIQFCLSAPKTDMDNQIVVSD 271
Query: 538 YSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKIKVLVVKDI 597
Y MDRVL+EERAYILN+VKQIKK GCNVLL+QKSILRDA+SDLA+HFL+K+K++VVKDI
Sbjct: 272 YVQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKMKIMVVKDI 331
Query: 598 EREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPA-GNSRFVKISGIQNPGRTLTV 656
EREDIEF+CKT+ T+P+A +D F + L SA+L EE+ G+ + +KI+G +PG+T+T+
Sbjct: 332 EREDIEFICKTIGTKPVAHVDQFTADMLGSAELAEEVSLNGSGKLIKITGCASPGKTVTI 391
Query: 657 VVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYADTVSGIDA 716
VVRGSNKLV++EA RS+HDALCV+RCLVK+RALIAGGGAPEIEL+L+LT+Y+ T+SG+++
Sbjct: 392 VVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMES 451
Query: 717 YCFRALIAGGGAPEIELSLKLTKYADTVSGIDAYCFRAFAQALEVIPLTLAENAGLNPIS 776
YC RAFA A+EVIP TLAENAGLNPIS
Sbjct: 452 YC---------------------------------IRAFADAMEVIPSTLAENAGLNPIS 478
Query: 777 TVTELRNRHAQGETTTGINVRKGAITNILEENVVQPLLVSTSAITLSTETVRSILKIDDI 836
TVTELRNRHAQGE TTGINVRKG I+NILEE VVQPLLVS SA+TL+TETVRSILKIDD+
Sbjct: 479 TVTELRNRHAQGEKTTGINVRKGGISNILEEQVVQPLLVSVSALTLATETVRSILKIDDV 538
Query: 837 VNT 839
VNT
Sbjct: 539 VNT 541
Score = 438 bits (1127), Expect = e-122, Method: Compositional matrix adjust.
Identities = 203/277 (73%), Positives = 250/277 (90%), Gaps = 1/277 (0%)
Query: 84 MDHKVVVSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDK 143
MD+++VVSDY MDRVL+EERAYILN+VKQIKK GCNVLL+QKSILRDA+SDLA+HFL+K
Sbjct: 263 MDNQIVVSDYVQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNK 322
Query: 144 IKVLVVKDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPA-GNSRFVKISGI 202
+K++VVKDIEREDIEF+CKT+ T+P+A +D F + L SA+L EE+ G+ + +KI+G
Sbjct: 323 MKIMVVKDIEREDIEFICKTIGTKPVAHVDQFTADMLGSAELAEEVSLNGSGKLIKITGC 382
Query: 203 QNPGRTLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKY 262
+PG+T+T+VVRGSNKLV++EA RS+HDALCV+RCLVK+RALIAGGGAPEIEL+L+LT+Y
Sbjct: 383 ASPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEY 442
Query: 263 ADTVSGIDAYCFRAFAQALEVIPLTLAENAGLNPISTVTELRNRHAQGETTTGINVRKGA 322
+ T+SG+++YC RAFA A+EVIP TLAENAGLNPISTVTELRNRHAQGE TTGINVRKG
Sbjct: 443 SRTLSGMESYCIRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTTGINVRKGG 502
Query: 323 ITNILEENVVQPLLVSTSAITLSTETVRSILKIDDIL 359
I+NILEE VVQPLLVS SA+TL+TETVRSILKIDD++
Sbjct: 503 ISNILEEQVVQPLLVSVSALTLATETVRSILKIDDVV 539
Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 63/83 (75%)
Query: 15 SAFKDKSKATDIRNSNIGAAKAVADAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQM 74
SA++D+ K IR SNI AAKAVADAIRTSLGP+GMDKMIQ G+VTITNDGATILKQM
Sbjct: 25 SAYQDRDKPAQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQM 84
Query: 75 NVIHPAAKMMDHKVVVSDYSAMD 97
V+HPAA+M+ D A D
Sbjct: 85 QVLHPAARMLVELSKAQDIEAGD 107
>sp|Q7TPB1|TCPD_RAT T-complex protein 1 subunit delta OS=Rattus norvegicus GN=Cct4 PE=1
SV=3
Length = 539
Score = 664 bits (1714), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/483 (67%), Positives = 401/483 (83%), Gaps = 35/483 (7%)
Query: 358 ILVELSKAQDIEAGDGTTSVVIVAGSLLEAAEKLLHKGIHPTTISDAFQKAAAKCVEILT 417
+LVELSKAQDIEAGDGTTSVVI+AGSLL++ KLL KGIHPT IS++FQKA K +EILT
Sbjct: 90 MLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGLEILT 149
Query: 418 EMSTPITLADRENLIKSAATSLNSKVVSQQASLLAPIAVDAVLKVVNPQRDTNVDLKDIK 477
+MS P+ L+DRE L+ SA TSLNSKVVSQ +SLL+P++V+AV+KV++P T+VDL+DIK
Sbjct: 150 DMSRPVQLSDRETLLNSATTSLNSKVVSQYSSLLSPMSVNAVMKVIDPATATSVDLRDIK 209
Query: 478 VIRKLGGTVEDTELVDGLVFTQKSANVNGPKRVEKAKIGLIQFCISPPKTDMDHKVVVSD 537
+++KLGGT++D ELV+GLV TQK AN +G RVEKAKIGLIQFC+S PKTDMD+++VVSD
Sbjct: 210 IVKKLGGTIDDCELVEGLVLTQKVAN-SGITRVEKAKIGLIQFCLSAPKTDMDNQIVVSD 268
Query: 538 YSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKIKVLVVKDI 597
Y+ MDRVL+EERAYILN+VKQIKK GCNVLL+QKSILRDA+SDLA+HFL+K+K++VVKDI
Sbjct: 269 YAQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKMKIMVVKDI 328
Query: 598 EREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPA-GNSRFVKISGIQNPGRTLTV 656
EREDIEF+CKT+ T+P+A +D F P+ L SA+L EE+ G+ + KI+G +PG+T+T+
Sbjct: 329 EREDIEFICKTIGTKPVAHIDQFTPDMLGSAELAEEVSLNGSGKLFKITGCTSPGKTVTI 388
Query: 657 VVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYADTVSGIDA 716
VVRGSNKLV++EA RS+HDALCV+RCLVK+RALIAGGGAPEIEL+L+LT+Y+ T+SG+++
Sbjct: 389 VVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMES 448
Query: 717 YCFRALIAGGGAPEIELSLKLTKYADTVSGIDAYCFRAFAQALEVIPLTLAENAGLNPIS 776
YC RAFA A+EVIP TLAENAGLNPIS
Sbjct: 449 YC---------------------------------VRAFADAMEVIPSTLAENAGLNPIS 475
Query: 777 TVTELRNRHAQGETTTGINVRKGAITNILEENVVQPLLVSTSAITLSTETVRSILKIDDI 836
TVTELRNRHAQGE TTGINVRKG I+NILEE VVQPLLVS SA+TL+TETVRSILKIDD+
Sbjct: 476 TVTELRNRHAQGEKTTGINVRKGGISNILEEMVVQPLLVSVSALTLATETVRSILKIDDV 535
Query: 837 VNT 839
VNT
Sbjct: 536 VNT 538
Score = 441 bits (1133), Expect = e-122, Method: Compositional matrix adjust.
Identities = 204/277 (73%), Positives = 251/277 (90%), Gaps = 1/277 (0%)
Query: 84 MDHKVVVSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDK 143
MD+++VVSDY+ MDRVL+EERAYILN+VKQIKK GCNVLL+QKSILRDA+SDLA+HFL+K
Sbjct: 260 MDNQIVVSDYAQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNK 319
Query: 144 IKVLVVKDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPA-GNSRFVKISGI 202
+K++VVKDIEREDIEF+CKT+ T+P+A +D F P+ L SA+L EE+ G+ + KI+G
Sbjct: 320 MKIMVVKDIEREDIEFICKTIGTKPVAHIDQFTPDMLGSAELAEEVSLNGSGKLFKITGC 379
Query: 203 QNPGRTLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKY 262
+PG+T+T+VVRGSNKLV++EA RS+HDALCV+RCLVK+RALIAGGGAPEIEL+L+LT+Y
Sbjct: 380 TSPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEY 439
Query: 263 ADTVSGIDAYCFRAFAQALEVIPLTLAENAGLNPISTVTELRNRHAQGETTTGINVRKGA 322
+ T+SG+++YC RAFA A+EVIP TLAENAGLNPISTVTELRNRHAQGE TTGINVRKG
Sbjct: 440 SRTLSGMESYCVRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTTGINVRKGG 499
Query: 323 ITNILEENVVQPLLVSTSAITLSTETVRSILKIDDIL 359
I+NILEE VVQPLLVS SA+TL+TETVRSILKIDD++
Sbjct: 500 ISNILEEMVVQPLLVSVSALTLATETVRSILKIDDVV 536
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/87 (63%), Positives = 63/87 (72%)
Query: 11 NSKSSAFKDKSKATDIRNSNIGAAKAVADAIRTSLGPRGMDKMIQASNGEVTITNDGATI 70
N A++D+ K IR SNI AAKAVADAIRTSLGP+GMDKMIQ G+VTITNDGATI
Sbjct: 18 NRGKGAYQDRDKPAQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATI 77
Query: 71 LKQMNVIHPAAKMMDHKVVVSDYSAMD 97
LKQM V+HPAA+M+ D A D
Sbjct: 78 LKQMQVLHPAARMLVELSKAQDIEAGD 104
>sp|P80315|TCPD_MOUSE T-complex protein 1 subunit delta OS=Mus musculus GN=Cct4 PE=1 SV=3
Length = 539
Score = 661 bits (1706), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/483 (67%), Positives = 400/483 (82%), Gaps = 35/483 (7%)
Query: 358 ILVELSKAQDIEAGDGTTSVVIVAGSLLEAAEKLLHKGIHPTTISDAFQKAAAKCVEILT 417
+LVELSKAQDIEAGDGTTSVVI+AGSLL++ KLL KGIHPT IS++FQKA K +EILT
Sbjct: 90 MLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGLEILT 149
Query: 418 EMSTPITLADRENLIKSAATSLNSKVVSQQASLLAPIAVDAVLKVVNPQRDTNVDLKDIK 477
+MS P+ L+DRE L+ SA TSLNSKVVSQ +SLL+P++V+AV+KV++P T+VDL+DIK
Sbjct: 150 DMSRPVQLSDRETLLNSATTSLNSKVVSQYSSLLSPMSVNAVMKVIDPATATSVDLRDIK 209
Query: 478 VIRKLGGTVEDTELVDGLVFTQKSANVNGPKRVEKAKIGLIQFCISPPKTDMDHKVVVSD 537
+++KLGGT++D ELV+GLV TQK AN +G RVEKAKIGLIQFC+S PKTDMD+++VVSD
Sbjct: 210 IVKKLGGTIDDCELVEGLVLTQKVAN-SGITRVEKAKIGLIQFCLSAPKTDMDNQIVVSD 268
Query: 538 YSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKIKVLVVKDI 597
Y+ MDRVL+EERAYILN+VKQIKK GCNVLL+QKSILRDA+SDLA+HFL+K+K++VVKD+
Sbjct: 269 YAQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKMKIMVVKDV 328
Query: 598 EREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPA-GNSRFVKISGIQNPGRTLTV 656
EREDIEF+CKT+ T+P+A +D F + L SA+L EE+ G+ + KI+G +PG+T+T+
Sbjct: 329 EREDIEFICKTIGTKPVAHIDQFTADMLGSAELAEEVSLNGSGKLFKITGCTSPGKTVTI 388
Query: 657 VVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYADTVSGIDA 716
VVRGSNKLV++EA RS+HDALCV+RCLVK+RALIAGGGAPEIEL+L+LT+Y+ T+SG+++
Sbjct: 389 VVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMES 448
Query: 717 YCFRALIAGGGAPEIELSLKLTKYADTVSGIDAYCFRAFAQALEVIPLTLAENAGLNPIS 776
YC RAFA A+EVIP TLAENAGLNPIS
Sbjct: 449 YC---------------------------------VRAFADAMEVIPSTLAENAGLNPIS 475
Query: 777 TVTELRNRHAQGETTTGINVRKGAITNILEENVVQPLLVSTSAITLSTETVRSILKIDDI 836
TVTELRNRHAQGE TTGINVRKG I+NILEE VVQPLLVS SA+TL+TETVRSILKIDD+
Sbjct: 476 TVTELRNRHAQGEKTTGINVRKGGISNILEEMVVQPLLVSVSALTLATETVRSILKIDDV 535
Query: 837 VNT 839
VNT
Sbjct: 536 VNT 538
Score = 437 bits (1124), Expect = e-121, Method: Compositional matrix adjust.
Identities = 202/277 (72%), Positives = 250/277 (90%), Gaps = 1/277 (0%)
Query: 84 MDHKVVVSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDK 143
MD+++VVSDY+ MDRVL+EERAYILN+VKQIKK GCNVLL+QKSILRDA+SDLA+HFL+K
Sbjct: 260 MDNQIVVSDYAQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNK 319
Query: 144 IKVLVVKDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPA-GNSRFVKISGI 202
+K++VVKD+EREDIEF+CKT+ T+P+A +D F + L SA+L EE+ G+ + KI+G
Sbjct: 320 MKIMVVKDVEREDIEFICKTIGTKPVAHIDQFTADMLGSAELAEEVSLNGSGKLFKITGC 379
Query: 203 QNPGRTLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKY 262
+PG+T+T+VVRGSNKLV++EA RS+HDALCV+RCLVK+RALIAGGGAPEIEL+L+LT+Y
Sbjct: 380 TSPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEY 439
Query: 263 ADTVSGIDAYCFRAFAQALEVIPLTLAENAGLNPISTVTELRNRHAQGETTTGINVRKGA 322
+ T+SG+++YC RAFA A+EVIP TLAENAGLNPISTVTELRNRHAQGE TTGINVRKG
Sbjct: 440 SRTLSGMESYCVRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTTGINVRKGG 499
Query: 323 ITNILEENVVQPLLVSTSAITLSTETVRSILKIDDIL 359
I+NILEE VVQPLLVS SA+TL+TETVRSILKIDD++
Sbjct: 500 ISNILEEMVVQPLLVSVSALTLATETVRSILKIDDVV 536
Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 63/83 (75%)
Query: 15 SAFKDKSKATDIRNSNIGAAKAVADAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQM 74
SA++D+ K IR SNI AAKAVADAIRTSLGP+GMDKMIQ G+VTITNDGATILKQM
Sbjct: 22 SAYQDRDKPAQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQM 81
Query: 75 NVIHPAAKMMDHKVVVSDYSAMD 97
V+HPAA+M+ D A D
Sbjct: 82 QVLHPAARMLVELSKAQDIEAGD 104
>sp|P50991|TCPD_HUMAN T-complex protein 1 subunit delta OS=Homo sapiens GN=CCT4 PE=1 SV=4
Length = 539
Score = 658 bits (1697), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/483 (66%), Positives = 400/483 (82%), Gaps = 35/483 (7%)
Query: 358 ILVELSKAQDIEAGDGTTSVVIVAGSLLEAAEKLLHKGIHPTTISDAFQKAAAKCVEILT 417
+LVELSKAQDIEAGDGTTSVVI+AGSLL++ KLL KGIHPT IS++FQKA K +EILT
Sbjct: 90 MLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILT 149
Query: 418 EMSTPITLADRENLIKSAATSLNSKVVSQQASLLAPIAVDAVLKVVNPQRDTNVDLKDIK 477
+MS P+ L+DRE L+ SA TSLNSKVVSQ +SLL+P++V+AV+KV++P T+VDL+DIK
Sbjct: 150 DMSRPVELSDRETLLNSATTSLNSKVVSQYSSLLSPMSVNAVMKVIDPATATSVDLRDIK 209
Query: 478 VIRKLGGTVEDTELVDGLVFTQKSANVNGPKRVEKAKIGLIQFCISPPKTDMDHKVVVSD 537
+++KLGGT++D ELV+GLV TQK +N +G RVEKAKIGLIQFC+S PKTDMD+++VVSD
Sbjct: 210 IVKKLGGTIDDCELVEGLVLTQKVSN-SGITRVEKAKIGLIQFCLSAPKTDMDNQIVVSD 268
Query: 538 YSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKIKVLVVKDI 597
Y+ MDRVL+EERAYILN+VKQIKK GCNVLL+QKSILRDA+SDLA+HFL+K+K++V+KDI
Sbjct: 269 YAQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKMKIMVIKDI 328
Query: 598 EREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPA-GNSRFVKISGIQNPGRTLTV 656
EREDIEF+CKT+ T+P+A +D F + L SA+L EE+ G+ + +KI+G +PG+T+T+
Sbjct: 329 EREDIEFICKTIGTKPVAHIDQFTADMLGSAELAEEVNLNGSGKLLKITGCASPGKTVTI 388
Query: 657 VVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYADTVSGIDA 716
VVRGSNKLV++EA RS+HDALCV+RCLVK+RALIAGGGAPEIEL+L+LT+Y+ T+SG+++
Sbjct: 389 VVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMES 448
Query: 717 YCFRALIAGGGAPEIELSLKLTKYADTVSGIDAYCFRAFAQALEVIPLTLAENAGLNPIS 776
YC RAFA A+EVIP TLAENAGLNPIS
Sbjct: 449 YC---------------------------------VRAFADAMEVIPSTLAENAGLNPIS 475
Query: 777 TVTELRNRHAQGETTTGINVRKGAITNILEENVVQPLLVSTSAITLSTETVRSILKIDDI 836
TVTELRNRHAQGE T GINVRKG I+NILEE VVQPLLVS SA+TL+TETVRSILKIDD+
Sbjct: 476 TVTELRNRHAQGEKTAGINVRKGGISNILEELVVQPLLVSVSALTLATETVRSILKIDDV 535
Query: 837 VNT 839
VNT
Sbjct: 536 VNT 538
Score = 434 bits (1116), Expect = e-120, Method: Compositional matrix adjust.
Identities = 201/277 (72%), Positives = 250/277 (90%), Gaps = 1/277 (0%)
Query: 84 MDHKVVVSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDK 143
MD+++VVSDY+ MDRVL+EERAYILN+VKQIKK GCNVLL+QKSILRDA+SDLA+HFL+K
Sbjct: 260 MDNQIVVSDYAQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNK 319
Query: 144 IKVLVVKDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPA-GNSRFVKISGI 202
+K++V+KDIEREDIEF+CKT+ T+P+A +D F + L SA+L EE+ G+ + +KI+G
Sbjct: 320 MKIMVIKDIEREDIEFICKTIGTKPVAHIDQFTADMLGSAELAEEVNLNGSGKLLKITGC 379
Query: 203 QNPGRTLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKY 262
+PG+T+T+VVRGSNKLV++EA RS+HDALCV+RCLVK+RALIAGGGAPEIEL+L+LT+Y
Sbjct: 380 ASPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEY 439
Query: 263 ADTVSGIDAYCFRAFAQALEVIPLTLAENAGLNPISTVTELRNRHAQGETTTGINVRKGA 322
+ T+SG+++YC RAFA A+EVIP TLAENAGLNPISTVTELRNRHAQGE T GINVRKG
Sbjct: 440 SRTLSGMESYCVRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTAGINVRKGG 499
Query: 323 ITNILEENVVQPLLVSTSAITLSTETVRSILKIDDIL 359
I+NILEE VVQPLLVS SA+TL+TETVRSILKIDD++
Sbjct: 500 ISNILEELVVQPLLVSVSALTLATETVRSILKIDDVV 536
Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/81 (65%), Positives = 61/81 (75%)
Query: 17 FKDKSKATDIRNSNIGAAKAVADAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMNV 76
++D+ K IR SNI AAKAVADAIRTSLGP+GMDKMIQ G+VTITNDGATILKQM V
Sbjct: 24 YQDRDKPAQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQV 83
Query: 77 IHPAAKMMDHKVVVSDYSAMD 97
+HPAA+M+ D A D
Sbjct: 84 LHPAARMLVELSKAQDIEAGD 104
>sp|Q5R637|TCPD_PONAB T-complex protein 1 subunit delta OS=Pongo abelii GN=CCT4 PE=2 SV=3
Length = 539
Score = 656 bits (1692), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/483 (66%), Positives = 399/483 (82%), Gaps = 35/483 (7%)
Query: 358 ILVELSKAQDIEAGDGTTSVVIVAGSLLEAAEKLLHKGIHPTTISDAFQKAAAKCVEILT 417
+LVELSKAQDIEAGDGTTSVVI+AGSLL++ KLL KGIHPT IS++FQKA K +EILT
Sbjct: 90 MLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILT 149
Query: 418 EMSTPITLADRENLIKSAATSLNSKVVSQQASLLAPIAVDAVLKVVNPQRDTNVDLKDIK 477
+MS P+ L+DRE L+ SA TSLNSKV SQ +SLL+P++V+AV+KV++P T+VDL+DIK
Sbjct: 150 DMSRPVELSDRETLLNSATTSLNSKVASQYSSLLSPMSVNAVMKVIDPATATSVDLRDIK 209
Query: 478 VIRKLGGTVEDTELVDGLVFTQKSANVNGPKRVEKAKIGLIQFCISPPKTDMDHKVVVSD 537
+++KLGGT++D ELV+GLV TQK +N +G RVEKAKIGLIQFC+S PKTDMD+++VVSD
Sbjct: 210 IVKKLGGTIDDCELVEGLVLTQKVSN-SGITRVEKAKIGLIQFCLSAPKTDMDNQIVVSD 268
Query: 538 YSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKIKVLVVKDI 597
Y+ MDRVL+EERAYILN+VKQIKK GCNVLL+QKSILRDA+SDLA+HFL+K+K++V+KDI
Sbjct: 269 YAQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKMKIMVIKDI 328
Query: 598 EREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPA-GNSRFVKISGIQNPGRTLTV 656
EREDIEF+CKT+ T+P+A +D F + L SA+L EE+ G+ + +KI+G +PG+T+T+
Sbjct: 329 EREDIEFICKTIGTKPVAHIDQFTADMLGSAELAEEVNLNGSGKLLKITGCASPGKTVTI 388
Query: 657 VVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYADTVSGIDA 716
VVRGSNKLV++EA RS+HDALCV+RCLVK+RALIAGGGAPEIEL+L+LT+Y+ T+SG+++
Sbjct: 389 VVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMES 448
Query: 717 YCFRALIAGGGAPEIELSLKLTKYADTVSGIDAYCFRAFAQALEVIPLTLAENAGLNPIS 776
YC RAFA A+EVIP TLAENAGLNPIS
Sbjct: 449 YC---------------------------------VRAFADAMEVIPSTLAENAGLNPIS 475
Query: 777 TVTELRNRHAQGETTTGINVRKGAITNILEENVVQPLLVSTSAITLSTETVRSILKIDDI 836
TVTELRNRHAQGE T GINVRKG I+NILEE VVQPLLVS SA+TL+TETVRSILKIDD+
Sbjct: 476 TVTELRNRHAQGEKTAGINVRKGGISNILEELVVQPLLVSVSALTLATETVRSILKIDDV 535
Query: 837 VNT 839
VNT
Sbjct: 536 VNT 538
Score = 434 bits (1116), Expect = e-120, Method: Compositional matrix adjust.
Identities = 201/277 (72%), Positives = 250/277 (90%), Gaps = 1/277 (0%)
Query: 84 MDHKVVVSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDK 143
MD+++VVSDY+ MDRVL+EERAYILN+VKQIKK GCNVLL+QKSILRDA+SDLA+HFL+K
Sbjct: 260 MDNQIVVSDYAQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNK 319
Query: 144 IKVLVVKDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPA-GNSRFVKISGI 202
+K++V+KDIEREDIEF+CKT+ T+P+A +D F + L SA+L EE+ G+ + +KI+G
Sbjct: 320 MKIMVIKDIEREDIEFICKTIGTKPVAHIDQFTADMLGSAELAEEVNLNGSGKLLKITGC 379
Query: 203 QNPGRTLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKY 262
+PG+T+T+VVRGSNKLV++EA RS+HDALCV+RCLVK+RALIAGGGAPEIEL+L+LT+Y
Sbjct: 380 ASPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEY 439
Query: 263 ADTVSGIDAYCFRAFAQALEVIPLTLAENAGLNPISTVTELRNRHAQGETTTGINVRKGA 322
+ T+SG+++YC RAFA A+EVIP TLAENAGLNPISTVTELRNRHAQGE T GINVRKG
Sbjct: 440 SRTLSGMESYCVRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTAGINVRKGG 499
Query: 323 ITNILEENVVQPLLVSTSAITLSTETVRSILKIDDIL 359
I+NILEE VVQPLLVS SA+TL+TETVRSILKIDD++
Sbjct: 500 ISNILEELVVQPLLVSVSALTLATETVRSILKIDDVV 536
Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/81 (65%), Positives = 61/81 (75%)
Query: 17 FKDKSKATDIRNSNIGAAKAVADAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMNV 76
++D+ K IR SNI AAKAVADAIRTSLGP+GMDKMIQ G+VTITNDGATILKQM V
Sbjct: 24 YQDRDKPAQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQV 83
Query: 77 IHPAAKMMDHKVVVSDYSAMD 97
+HPAA+M+ D A D
Sbjct: 84 LHPAARMLVELSKAQDIEAGD 104
>sp|P53451|TCPD_TAKRU T-complex protein 1 subunit delta OS=Takifugu rubripes GN=cct4 PE=2
SV=1
Length = 536
Score = 649 bits (1675), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/482 (65%), Positives = 394/482 (81%), Gaps = 35/482 (7%)
Query: 358 ILVELSKAQDIEAGDGTTSVVIVAGSLLEAAEKLLHKGIHPTTISDAFQKAAAKCVEILT 417
+LVELSKAQDIEAGDGTTSVV++AG+LL++ +LL +GIHPT IS++FQKA K VE+LT
Sbjct: 87 MLVELSKAQDIEAGDGTTSVVVIAGALLDSCNRLLQRGIHPTIISESFQKAVDKGVEVLT 146
Query: 418 EMSTPITLADRENLIKSAATSLNSKVVSQQASLLAPIAVDAVLKVVNPQRDTNVDLKDIK 477
MS P+ L DRE L+ SA TSL SKVVSQ +SLLAP++VDAV++V++P T+VDL DIK
Sbjct: 147 AMSQPVQLGDRETLLNSATTSLCSKVVSQYSSLLAPMSVDAVMRVIDPATATSVDLHDIK 206
Query: 478 VIRKLGGTVEDTELVDGLVFTQKSANVNGPKRVEKAKIGLIQFCISPPKTDMDHKVVVSD 537
+I+KLGGT++D ELV+GLV TQ+ AN + RVEKAKIGLIQFC+SPPKTDMD+++VVSD
Sbjct: 207 IIKKLGGTIDDCELVEGLVLTQRVAN-SSVSRVEKAKIGLIQFCLSPPKTDMDNQIVVSD 265
Query: 538 YSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKIKVLVVKDI 597
Y+ MDRVL+EERAYILN+VKQIKKAGCNVL +QKSILRDA+SDLA+HFL+K+K++VVKDI
Sbjct: 266 YTQMDRVLREERAYILNMVKQIKKAGCNVLFIQKSILRDALSDLALHFLNKMKIMVVKDI 325
Query: 598 EREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPA-GNSRFVKISGIQNPGRTLTV 656
EREDIEF+CKT+ T+PIA +DHF PE L +A+L EE+ G+ + VKI+G +PG+T+++
Sbjct: 326 EREDIEFICKTIGTKPIAHIDHFTPEMLGTAELAEEVSLDGSGKLVKITGCASPGKTVSI 385
Query: 657 VVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYADTVSGIDA 716
VVRGSNKLV++EA RS+HDALCV+RCLVK+RALIAGGGAPEIEL+++L +Y+ T+ G++A
Sbjct: 386 VVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELAVRLAEYSRTLGGMEA 445
Query: 717 YCFRALIAGGGAPEIELSLKLTKYADTVSGIDAYCFRAFAQALEVIPLTLAENAGLNPIS 776
Y C RA++ ALEVIP TLAENAGLNPIS
Sbjct: 446 Y---------------------------------CVRAYSDALEVIPSTLAENAGLNPIS 472
Query: 777 TVTELRNRHAQGETTTGINVRKGAITNILEENVVQPLLVSTSAITLSTETVRSILKIDDI 836
TVTELRNRHAQG+ GINVRKG I+NI+EE VVQPLLVS SA+TL+TETVRSILKIDD+
Sbjct: 473 TVTELRNRHAQGDKMAGINVRKGGISNIMEELVVQPLLVSISALTLATETVRSILKIDDV 532
Query: 837 VN 838
VN
Sbjct: 533 VN 534
Score = 433 bits (1114), Expect = e-120, Method: Compositional matrix adjust.
Identities = 200/284 (70%), Positives = 251/284 (88%), Gaps = 1/284 (0%)
Query: 77 IHPAAKMMDHKVVVSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDL 136
+ P MD+++VVSDY+ MDRVL+EERAYILN+VKQIKKAGCNVL +QKSILRDA+SDL
Sbjct: 250 LSPPKTDMDNQIVVSDYTQMDRVLREERAYILNMVKQIKKAGCNVLFIQKSILRDALSDL 309
Query: 137 AIHFLDKIKVLVVKDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPA-GNSR 195
A+HFL+K+K++VVKDIEREDIEF+CKT+ T+PIA +DHF PE L +A+L EE+ G+ +
Sbjct: 310 ALHFLNKMKIMVVKDIEREDIEFICKTIGTKPIAHIDHFTPEMLGTAELAEEVSLDGSGK 369
Query: 196 FVKISGIQNPGRTLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIEL 255
VKI+G +PG+T+++VVRGSNKLV++EA RS+HDALCV+RCLVK+RALIAGGGAPEIEL
Sbjct: 370 LVKITGCASPGKTVSIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIEL 429
Query: 256 SLKLTKYADTVSGIDAYCFRAFAQALEVIPLTLAENAGLNPISTVTELRNRHAQGETTTG 315
+++L +Y+ T+ G++AYC RA++ ALEVIP TLAENAGLNPISTVTELRNRHAQG+ G
Sbjct: 430 AVRLAEYSRTLGGMEAYCVRAYSDALEVIPSTLAENAGLNPISTVTELRNRHAQGDKMAG 489
Query: 316 INVRKGAITNILEENVVQPLLVSTSAITLSTETVRSILKIDDIL 359
INVRKG I+NI+EE VVQPLLVS SA+TL+TETVRSILKIDD++
Sbjct: 490 INVRKGGISNIMEELVVQPLLVSISALTLATETVRSILKIDDVV 533
Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/83 (67%), Positives = 66/83 (79%), Gaps = 1/83 (1%)
Query: 2 TVNASGDSKNSKSSAFKDKSKATDIRNSNIGAAKAVADAIRTSLGPRGMDKMIQASNGEV 61
T +AS KN K A++D+ K IR SNI AAKAVADA+RTSLGP+GMDKMIQ G+V
Sbjct: 7 TSSASNTGKN-KGGAYQDRDKPAQIRYSNISAAKAVADAVRTSLGPKGMDKMIQDEKGDV 65
Query: 62 TITNDGATILKQMNVIHPAAKMM 84
TITNDGATILKQM V+HP+AKM+
Sbjct: 66 TITNDGATILKQMQVLHPSAKML 88
>sp|Q54CL2|TCPD_DICDI T-complex protein 1 subunit delta OS=Dictyostelium discoideum
GN=cct4 PE=3 SV=1
Length = 533
Score = 587 bits (1514), Expect = e-166, Method: Compositional matrix adjust.
Identities = 292/480 (60%), Positives = 372/480 (77%), Gaps = 35/480 (7%)
Query: 358 ILVELSKAQDIEAGDGTTSVVIVAGSLLEAAEKLLHKGIHPTTISDAFQKAAAKCVEILT 417
+L EL+KAQDIEAGDGTTSV ++AGSLL A +L+ KGIHP+ IS+AF A K +E+L
Sbjct: 84 MLAELAKAQDIEAGDGTTSVCVIAGSLLGAVSQLMAKGIHPSIISEAFNLALNKSLEVLV 143
Query: 418 EMSTPITLADRENLIKSAATSLNSKVVSQQASLLAPIAVDAVLKVVNPQRDTNVDLKDIK 477
MS P++L DR +L+KSA TSLNSKVVSQ +L A IAVDAVL V+NP NV+LKDIK
Sbjct: 144 SMSVPVSLTDRVSLVKSATTSLNSKVVSQYTNL-ASIAVDAVLSVINPATAVNVNLKDIK 202
Query: 478 VIRKLGGTVEDTELVDGLVFTQKSANV-NGPKRVEKAKIGLIQFCISPPKTDMDHKVVVS 536
+I+KLGGT+EDTELV GLVF Q +++ GP R++ AKIGLIQFC+S PKT MD+ +VVS
Sbjct: 203 LIKKLGGTIEDTELVQGLVFDQTASHTAGGPTRIQNAKIGLIQFCLSAPKTYMDNNIVVS 262
Query: 537 DYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKIKVLVVKD 596
DYS MD+V+KEE IL + ++I+K+GCNVLLVQKSILRDA++DL++H+L K+K+LV+KD
Sbjct: 263 DYSKMDKVIKEEPKLILEMCRKIQKSGCNVLLVQKSILRDAVNDLSLHYLAKLKILVIKD 322
Query: 597 IEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISGIQNPGRTLTV 656
IER+DIEF+C T+ +P+A++D F + L ADLVEE+ + + VK++GI NPG+T+TV
Sbjct: 323 IERDDIEFICNTIGCQPVANIDSFTADKLGKADLVEEVGTSDGKIVKVTGIPNPGKTVTV 382
Query: 657 VVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYADTVSGIDA 716
+ RGSNKLVLDEA RSLHDALCV+R LVK++ LIAGGGAPEIE+S ++T ++ T++GI +
Sbjct: 383 LCRGSNKLVLDEAERSLHDALCVIRSLVKKKFLIAGGGAPEIEVSQQVTAFSKTLTGITS 442
Query: 717 YCFRALIAGGGAPEIELSLKLTKYADTVSGIDAYCFRAFAQALEVIPLTLAENAGLNPIS 776
Y C RA+A+ALE+IP TLAENAGL+PIS
Sbjct: 443 Y---------------------------------CVRAYAEALEIIPYTLAENAGLHPIS 469
Query: 777 TVTELRNRHAQGETTTGINVRKGAITNILEENVVQPLLVSTSAITLSTETVRSILKIDDI 836
VTELRN+HAQGE +GINVRKGAITNIL+ENVVQPLLVSTSA+TL+TETV +LKIDDI
Sbjct: 470 IVTELRNKHAQGEINSGINVRKGAITNILQENVVQPLLVSTSALTLATETVVMLLKIDDI 529
Score = 396 bits (1018), Expect = e-109, Method: Compositional matrix adjust.
Identities = 183/275 (66%), Positives = 237/275 (86%)
Query: 84 MDHKVVVSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDK 143
MD+ +VVSDYS MD+V+KEE IL + ++I+K+GCNVLLVQKSILRDA++DL++H+L K
Sbjct: 255 MDNNIVVSDYSKMDKVIKEEPKLILEMCRKIQKSGCNVLLVQKSILRDAVNDLSLHYLAK 314
Query: 144 IKVLVVKDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISGIQ 203
+K+LV+KDIER+DIEF+C T+ +P+A++D F + L ADLVEE+ + + VK++GI
Sbjct: 315 LKILVIKDIERDDIEFICNTIGCQPVANIDSFTADKLGKADLVEEVGTSDGKIVKVTGIP 374
Query: 204 NPGRTLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYA 263
NPG+T+TV+ RGSNKLVLDEA RSLHDALCV+R LVK++ LIAGGGAPEIE+S ++T ++
Sbjct: 375 NPGKTVTVLCRGSNKLVLDEAERSLHDALCVIRSLVKKKFLIAGGGAPEIEVSQQVTAFS 434
Query: 264 DTVSGIDAYCFRAFAQALEVIPLTLAENAGLNPISTVTELRNRHAQGETTTGINVRKGAI 323
T++GI +YC RA+A+ALE+IP TLAENAGL+PIS VTELRN+HAQGE +GINVRKGAI
Sbjct: 435 KTLTGITSYCVRAYAEALEIIPYTLAENAGLHPISIVTELRNKHAQGEINSGINVRKGAI 494
Query: 324 TNILEENVVQPLLVSTSAITLSTETVRSILKIDDI 358
TNIL+ENVVQPLLVSTSA+TL+TETV +LKIDDI
Sbjct: 495 TNILQENVVQPLLVSTSALTLATETVVMLLKIDDI 529
Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/83 (59%), Positives = 59/83 (71%)
Query: 15 SAFKDKSKATDIRNSNIGAAKAVADAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQM 74
S F +K K D+R SNI AA+AVADAIRTSLGP+GMDKMI + N EV I+NDGATIL+ +
Sbjct: 16 SDFDEKEKEKDVRTSNIVAARAVADAIRTSLGPKGMDKMIISPNNEVLISNDGATILQNL 75
Query: 75 NVIHPAAKMMDHKVVVSDYSAMD 97
+ HPAAKM+ D A D
Sbjct: 76 ELRHPAAKMLAELAKAQDIEAGD 98
>sp|P47208|TCPD_CAEEL T-complex protein 1 subunit delta OS=Caenorhabditis elegans
GN=cct-4 PE=2 SV=1
Length = 540
Score = 579 bits (1492), Expect = e-164, Method: Compositional matrix adjust.
Identities = 282/481 (58%), Positives = 371/481 (77%), Gaps = 34/481 (7%)
Query: 358 ILVELSKAQDIEAGDGTTSVVIVAGSLLEAAEKLLHKGIHPTTISDAFQKAAAKCVEILT 417
+LVELSKAQDIEAGDGTT+VV++AG+LL+AA+ LL KGIHPTTIS++FQ AAA+ +IL
Sbjct: 89 MLVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSAAAEAEKILD 148
Query: 418 EMSTPITLADRENLIKSAATSLNSKVVSQQASLLAPIAVDAVLKVVNPQRDTNVDLKDIK 477
EMS+P+ L++ L K A TSLNSKVVSQ + LLAP+AV+AV K++N + D+NV+LK IK
Sbjct: 149 EMSSPVDLSNDALLNKMATTSLNSKVVSQHSWLLAPMAVNAVKKIINSENDSNVNLKMIK 208
Query: 478 VIRKLGGTVEDTELVDGLVFTQKSANVNGPKRVEKAKIGLIQFCISPPKTDMDHKVVVSD 537
+I+K+G TVE++EL++G + QK+ P R+EKAKIGLIQF ISPPKTDM+++V+++D
Sbjct: 209 IIKKMGDTVEESELIEGALIDQKTMGRGAPTRIEKAKIGLIQFQISPPKTDMENQVIITD 268
Query: 538 YSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKIKVLVVKDI 597
Y+ MDR LKEER Y+L I KQIK AGCNVLL+QKSILRDA+++LA+HFL K+K++ +KDI
Sbjct: 269 YAQMDRALKEERQYLLEICKQIKAAGCNVLLIQKSILRDAVNELALHFLAKMKIMCIKDI 328
Query: 598 EREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIP-AGNSRFVKISGIQNPGRTLTV 656
EREDIEF + L RP+AS+DHF + L ADLVEEIP G+ + +K++G+QNPG +++
Sbjct: 329 EREDIEFYSRILGCRPVASVDHFNADALGYADLVEEIPTGGDGKVIKVTGVQNPGHAVSI 388
Query: 657 VVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYADTVSGIDA 716
++RGSNKLVL+EA RS+HDALCV+RCLVK++AL+ GGGAPE+E+++KL A T G
Sbjct: 389 LLRGSNKLVLEEADRSIHDALCVIRCLVKKKALLPGGGAPEMEIAVKLRNLAQTQHGATQ 448
Query: 717 YCFRALIAGGGAPEIELSLKLTKYADTVSGIDAYCFRAFAQALEVIPLTLAENAGLNPIS 776
YC +RAFA ALE+IP TLAENAGL+PI
Sbjct: 449 YC---------------------------------WRAFADALELIPYTLAENAGLSPIH 475
Query: 777 TVTELRNRHAQGETTTGINVRKGAITNILEENVVQPLLVSTSAITLSTETVRSILKIDDI 836
TVTELRN HA G ++ G+NVRKG +T+++EE+VVQPLLV+ SAI ++E VRSILKIDDI
Sbjct: 476 TVTELRNNHANGNSSYGVNVRKGYVTDMVEEDVVQPLLVTASAIKQASECVRSILKIDDI 535
Query: 837 V 837
V
Sbjct: 536 V 536
Score = 384 bits (985), Expect = e-105, Method: Compositional matrix adjust.
Identities = 175/285 (61%), Positives = 233/285 (81%), Gaps = 1/285 (0%)
Query: 77 IHPAAKMMDHKVVVSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDL 136
I P M+++V+++DY+ MDR LKEER Y+L I KQIK AGCNVLL+QKSILRDA+++L
Sbjct: 253 ISPPKTDMENQVIITDYAQMDRALKEERQYLLEICKQIKAAGCNVLLIQKSILRDAVNEL 312
Query: 137 AIHFLDKIKVLVVKDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIP-AGNSR 195
A+HFL K+K++ +KDIEREDIEF + L RP+AS+DHF + L ADLVEEIP G+ +
Sbjct: 313 ALHFLAKMKIMCIKDIEREDIEFYSRILGCRPVASVDHFNADALGYADLVEEIPTGGDGK 372
Query: 196 FVKISGIQNPGRTLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIEL 255
+K++G+QNPG +++++RGSNKLVL+EA RS+HDALCV+RCLVK++AL+ GGGAPE+E+
Sbjct: 373 VIKVTGVQNPGHAVSILLRGSNKLVLEEADRSIHDALCVIRCLVKKKALLPGGGAPEMEI 432
Query: 256 SLKLTKYADTVSGIDAYCFRAFAQALEVIPLTLAENAGLNPISTVTELRNRHAQGETTTG 315
++KL A T G YC+RAFA ALE+IP TLAENAGL+PI TVTELRN HA G ++ G
Sbjct: 433 AVKLRNLAQTQHGATQYCWRAFADALELIPYTLAENAGLSPIHTVTELRNNHANGNSSYG 492
Query: 316 INVRKGAITNILEENVVQPLLVSTSAITLSTETVRSILKIDDILV 360
+NVRKG +T+++EE+VVQPLLV+ SAI ++E VRSILKIDDI++
Sbjct: 493 VNVRKGYVTDMVEEDVVQPLLVTASAIKQASECVRSILKIDDIVM 537
Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/81 (71%), Positives = 66/81 (81%), Gaps = 5/81 (6%)
Query: 4 NASGDSKNSKSSAFKDKSKATDIRNSNIGAAKAVADAIRTSLGPRGMDKMIQASNGEVTI 63
+ASG +N FKDK K +RNSNI AAKAVADA+RTSLGPRGMDKMIQ+ NG+VTI
Sbjct: 15 SASGRERN-----FKDKDKPESVRNSNIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTI 69
Query: 64 TNDGATILKQMNVIHPAAKMM 84
TNDGATIL QM+VIHP AKM+
Sbjct: 70 TNDGATILNQMSVIHPTAKML 90
>sp|P50999|TCPD_SCHPO T-complex protein 1 subunit delta OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=cct4 PE=2 SV=2
Length = 527
Score = 564 bits (1454), Expect = e-160, Method: Compositional matrix adjust.
Identities = 275/480 (57%), Positives = 366/480 (76%), Gaps = 34/480 (7%)
Query: 358 ILVELSKAQDIEAGDGTTSVVIVAGSLLEAAEKLLHKGIHPTTISDAFQKAAAKCVEILT 417
+LV+LS AQD+EAGDGTTSVVI+AGS+L AEKLL KGIHPT I+++FQ+AA V+ +
Sbjct: 77 MLVDLSAAQDVEAGDGTTSVVILAGSMLACAEKLLKKGIHPTVIAESFQRAAGFTVDCMK 136
Query: 418 EMSTPITLADRENLIKSAATSLNSKVVSQQASLLAPIAVDAVLKVVNPQRDTNVDLKDIK 477
E + I L+DRE+L+++A TSLNSK+VSQ ++LLAPIAVDAVLKV++P+ TNVDLKDI+
Sbjct: 137 ENALAIELSDRESLLRAATTSLNSKIVSQYSNLLAPIAVDAVLKVIDPRVATNVDLKDIR 196
Query: 478 VIRKLGGTVEDTELVDGLVFTQKSA-NVNGPKRVEKAKIGLIQFCISPPKTDMDHKVVVS 536
+++KLGG ++DTEL+ GL TQ + + GP R+EKA I LIQF +SPPK DM+++VVV+
Sbjct: 197 IVKKLGGIIDDTELIPGLALTQTAVKSAGGPTRIEKANIALIQFQLSPPKPDMENQVVVN 256
Query: 537 DYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKIKVLVVKD 596
DY MD++LKEER Y+LN+ K+IKKAG NV+L+QKSILRDA++DLA+HFL K+K++V+KD
Sbjct: 257 DYRQMDKILKEERQYLLNMCKKIKKAGANVILIQKSILRDAVNDLALHFLAKLKIMVIKD 316
Query: 597 IEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISGIQNPGRTLTV 656
IER+++EF+CK+ +PIA ++ F + L ADLVEE + + VK SG++N G+T+++
Sbjct: 317 IERDEVEFICKSTGCKPIADIESFAEDKLGHADLVEETSSSGEKIVKFSGVKNAGKTVSI 376
Query: 657 VVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYADTVSGIDA 716
+ RG+N L L+EA RSLHDALCV+RCLVKQRALIAGGG+PEIE + +L ++A + G +A
Sbjct: 377 LCRGANLLTLEEAERSLHDALCVIRCLVKQRALIAGGGSPEIEAAQRLLEHARQLEGREA 436
Query: 717 YCFRALIAGGGAPEIELSLKLTKYADTVSGIDAYCFRAFAQALEVIPLTLAENAGLNPIS 776
C RAF++ALE+IP+TLAENAGLN I
Sbjct: 437 IC---------------------------------IRAFSEALEIIPVTLAENAGLNAIQ 463
Query: 777 TVTELRNRHAQGETTTGINVRKGAITNILEENVVQPLLVSTSAITLSTETVRSILKIDDI 836
VTELR+RHA GE T GINVRKG +TNILEENV+QPLLV+ SAI L+ ET + I+KIDDI
Sbjct: 464 VVTELRSRHANGEKTAGINVRKGIVTNILEENVLQPLLVNISAIQLAAETTKMIMKIDDI 523
Score = 370 bits (951), Expect = e-101, Method: Compositional matrix adjust.
Identities = 173/298 (58%), Positives = 235/298 (78%), Gaps = 6/298 (2%)
Query: 67 GATILKQMNV------IHPAAKMMDHKVVVSDYSAMDRVLKEERAYILNIVKQIKKAGCN 120
G T +++ N+ + P M+++VVV+DY MD++LKEER Y+LN+ K+IKKAG N
Sbjct: 226 GPTRIEKANIALIQFQLSPPKPDMENQVVVNDYRQMDKILKEERQYLLNMCKKIKKAGAN 285
Query: 121 VLLVQKSILRDAISDLAIHFLDKIKVLVVKDIEREDIEFVCKTLNTRPIASLDHFLPEHL 180
V+L+QKSILRDA++DLA+HFL K+K++V+KDIER+++EF+CK+ +PIA ++ F + L
Sbjct: 286 VILIQKSILRDAVNDLALHFLAKLKIMVIKDIERDEVEFICKSTGCKPIADIESFAEDKL 345
Query: 181 SSADLVEEIPAGNSRFVKISGIQNPGRTLTVVVRGSNKLVLDEAARSLHDALCVVRCLVK 240
ADLVEE + + VK SG++N G+T++++ RG+N L L+EA RSLHDALCV+RCLVK
Sbjct: 346 GHADLVEETSSSGEKIVKFSGVKNAGKTVSILCRGANLLTLEEAERSLHDALCVIRCLVK 405
Query: 241 QRALIAGGGAPEIELSLKLTKYADTVSGIDAYCFRAFAQALEVIPLTLAENAGLNPISTV 300
QRALIAGGG+PEIE + +L ++A + G +A C RAF++ALE+IP+TLAENAGLN I V
Sbjct: 406 QRALIAGGGSPEIEAAQRLLEHARQLEGREAICIRAFSEALEIIPVTLAENAGLNAIQVV 465
Query: 301 TELRNRHAQGETTTGINVRKGAITNILEENVVQPLLVSTSAITLSTETVRSILKIDDI 358
TELR+RHA GE T GINVRKG +TNILEENV+QPLLV+ SAI L+ ET + I+KIDDI
Sbjct: 466 TELRSRHANGEKTAGINVRKGIVTNILEENVLQPLLVNISAIQLAAETTKMIMKIDDI 523
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 62/82 (75%)
Query: 16 AFKDKSKATDIRNSNIGAAKAVADAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMN 75
AF+D+ K ++R SNI AA++VADAIRTSLGP+GMDKMIQ GEV +TNDGATILK ++
Sbjct: 10 AFQDREKPQEVRLSNIMAARSVADAIRTSLGPKGMDKMIQTGKGEVILTNDGATILKHLS 69
Query: 76 VIHPAAKMMDHKVVVSDYSAMD 97
V+HPAAKM+ D A D
Sbjct: 70 VLHPAAKMLVDLSAAQDVEAGD 91
>sp|Q6BXF6|TCPD_DEBHA T-complex protein 1 subunit delta OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=CCT4 PE=3 SV=1
Length = 533
Score = 522 bits (1344), Expect = e-147, Method: Compositional matrix adjust.
Identities = 274/482 (56%), Positives = 367/482 (76%), Gaps = 37/482 (7%)
Query: 358 ILVELSKAQDIEAGDGTTSVVIVAGSLLEAAEKLLHKGIHPTTISDAFQKAAAKCVEILT 417
+LV++S AQD+EAGDGTTSV I+ GSLL AAEKLL+KGIHPT IS++FQ+AA + E+L
Sbjct: 82 MLVDVSAAQDVEAGDGTTSVAILTGSLLGAAEKLLNKGIHPTLISESFQRAATRSAEVLL 141
Query: 418 EMSTPITLADRENLIKSAATSLNSKVVSQQASLLAPIAVDAVLKVVNPQRDTNVDLKDIK 477
EMS I+L D+E LI++A+TSL+SK+VSQ +SLL+P+AV++VLKV+N + TNVDL DI+
Sbjct: 142 EMSHKISLDDKEALIRAASTSLSSKIVSQHSSLLSPLAVNSVLKVMNEEH-TNVDLNDIR 200
Query: 478 VIRKLGGTVEDTELVDGLVFTQKSANV-NGPKRVEKAKIGLIQFCISPPKTDMDHKVVVS 536
+I+K+GGT+++TELV+G+V TQ GP RV+KAKI LIQF +SPPK DM++ VVV+
Sbjct: 201 LIKKVGGTIDETELVNGVVLTQNVVKTAGGPVRVDKAKIALIQFQLSPPKPDMENNVVVN 260
Query: 537 DYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKIKVLVVKD 596
DY MD++LKEERAY+LNI K+IKK+ CNVLL+QKSILRDA++DLA+HFL K+ ++V+KD
Sbjct: 261 DYRQMDKILKEERAYLLNICKKIKKSKCNVLLIQKSILRDAVNDLALHFLSKLNIMVIKD 320
Query: 597 IEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISGI--QNPGRTL 654
IER++IEF+ K +PIA +D+F + L SAD+VEEI + SR VKI G+ +N T+
Sbjct: 321 IERDEIEFLSKATGCKPIADIDNFTEDRLGSADVVEEIESSGSRIVKIDGVSAKNVKPTV 380
Query: 655 TVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYADTVSGI 714
++V RG+N+LVLDE RS+HDALCVVRCLVK++ALIAGGGAPEIE+S L A+ +S
Sbjct: 381 SIVCRGANQLVLDETERSIHDALCVVRCLVKEKALIAGGGAPEIEVSRVLMSEANKLS-- 438
Query: 715 DAYCFRALIAGGGAPEIELSLKLTKYADTVSGIDAYCFRAFAQALEVIPLTLAENAGLNP 774
G++ + ++ FAQALEVIP TLAENAGLN
Sbjct: 439 -------------------------------GVEQFVYQEFAQALEVIPTTLAENAGLNS 467
Query: 775 ISTVTELRNRHAQGETTTGINVRKGAITNILEENVVQPLLVSTSAITLSTETVRSILKID 834
I+ VT+LRNRHA GE GI+VR+ +N +E+V+QP+LVS+SAITL++E V+SIL+ID
Sbjct: 468 INVVTDLRNRHANGEKNAGISVRRSGASNTYDEHVLQPVLVSSSAITLASECVKSILRID 527
Query: 835 DI 836
DI
Sbjct: 528 DI 529
Score = 333 bits (854), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 169/284 (59%), Positives = 227/284 (79%), Gaps = 2/284 (0%)
Query: 77 IHPAAKMMDHKVVVSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDL 136
+ P M++ VVV+DY MD++LKEERAY+LNI K+IKK+ CNVLL+QKSILRDA++DL
Sbjct: 246 LSPPKPDMENNVVVNDYRQMDKILKEERAYLLNICKKIKKSKCNVLLIQKSILRDAVNDL 305
Query: 137 AIHFLDKIKVLVVKDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRF 196
A+HFL K+ ++V+KDIER++IEF+ K +PIA +D+F + L SAD+VEEI + SR
Sbjct: 306 ALHFLSKLNIMVIKDIERDEIEFLSKATGCKPIADIDNFTEDRLGSADVVEEIESSGSRI 365
Query: 197 VKISGI--QNPGRTLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIE 254
VKI G+ +N T+++V RG+N+LVLDE RS+HDALCVVRCLVK++ALIAGGGAPEIE
Sbjct: 366 VKIDGVSAKNVKPTVSIVCRGANQLVLDETERSIHDALCVVRCLVKEKALIAGGGAPEIE 425
Query: 255 LSLKLTKYADTVSGIDAYCFRAFAQALEVIPLTLAENAGLNPISTVTELRNRHAQGETTT 314
+S L A+ +SG++ + ++ FAQALEVIP TLAENAGLN I+ VT+LRNRHA GE
Sbjct: 426 VSRVLMSEANKLSGVEQFVYQEFAQALEVIPTTLAENAGLNSINVVTDLRNRHANGEKNA 485
Query: 315 GINVRKGAITNILEENVVQPLLVSTSAITLSTETVRSILKIDDI 358
GI+VR+ +N +E+V+QP+LVS+SAITL++E V+SIL+IDDI
Sbjct: 486 GISVRRSGASNTYDEHVLQPVLVSSSAITLASECVKSILRIDDI 529
Score = 106 bits (264), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 53/89 (59%), Positives = 66/89 (74%), Gaps = 1/89 (1%)
Query: 10 KNSKSSA-FKDKSKATDIRNSNIGAAKAVADAIRTSLGPRGMDKMIQASNGEVTITNDGA 68
K S S+A F+DK K ++R SNI AA+AV+DAIRTSLGP+GMDKMI+ NGE+ I+NDGA
Sbjct: 8 KGSPSNATFRDKEKPQEVRKSNILAARAVSDAIRTSLGPKGMDKMIKTKNGEIIISNDGA 67
Query: 69 TILKQMNVIHPAAKMMDHKVVVSDYSAMD 97
TILK M V+HPAA+M+ D A D
Sbjct: 68 TILKHMAVLHPAARMLVDVSAAQDVEAGD 96
>sp|P39078|TCPD_YEAST T-complex protein 1 subunit delta OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CCT4 PE=1 SV=2
Length = 528
Score = 518 bits (1334), Expect = e-146, Method: Compositional matrix adjust.
Identities = 269/482 (55%), Positives = 364/482 (75%), Gaps = 37/482 (7%)
Query: 358 ILVELSKAQDIEAGDGTTSVVIVAGSLLEAAEKLLHKGIHPTTISDAFQKAAAKCVEILT 417
+LVE+S AQD EAGDGTTSVVI+ G+LL AAE+LL+KGIHPT I+D+FQ AA + V+IL
Sbjct: 77 MLVEVSAAQDSEAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVDILL 136
Query: 418 EMSTPITLADRENLIKSAATSLNSKVVSQQASLLAPIAVDAVLKVVNPQRDTNVDLKDIK 477
EM ++L+DRE L+++A+TSL+SK+VSQ +S LAP+AVD+VLK+ + + NVDL DI+
Sbjct: 137 EMCHKVSLSDREQLVRAASTSLSSKIVSQYSSFLAPLAVDSVLKISD-ENSKNVDLNDIR 195
Query: 478 VIRKLGGTVEDTELVDGLVFTQKS-ANVNGPKRVEKAKIGLIQFCISPPKTDMDHKVVVS 536
+++K+GGT++DTE++DG+V TQ + + GP R EKAKIGLIQF ISPPK D ++ ++V+
Sbjct: 196 LVKKVGGTIDDTEMIDGVVLTQTAIKSAGGPTRKEKAKIGLIQFQISPPKPDTENNIIVN 255
Query: 537 DYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKIKVLVVKD 596
DY MD++LKEERAY+LNI K+IKKA CNVLL+QKSILRDA++DLA+HFL K+ ++VVKD
Sbjct: 256 DYRQMDKILKEERAYLLNICKKIKKAKCNVLLIQKSILRDAVNDLALHFLSKLNIMVVKD 315
Query: 597 IEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISGIQNPGR--TL 654
IERE+IEF+ K L +PIA ++ F + L SADLVEEI + S+ V+++GI+N T+
Sbjct: 316 IEREEIEFLSKGLGCKPIADIELFTEDRLGSADLVEEIDSDGSKIVRVTGIRNNNARPTV 375
Query: 655 TVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYADTVSGI 714
+VV+RG+N +++DE RSLHDALCV+RCLVK+R LIAGGGAPEIE+S +L+K A ++ G
Sbjct: 376 SVVIRGANNMIIDETERSLHDALCVIRCLVKERGLIAGGGAPEIEISRRLSKEARSMEG- 434
Query: 715 DAYCFRALIAGGGAPEIELSLKLTKYADTVSGIDAYCFRAFAQALEVIPLTLAENAGLNP 774
+ A+ ++ FA ALEVIP TLAENAGLN
Sbjct: 435 --------------------------------VQAFIWQEFASALEVIPTTLAENAGLNS 462
Query: 775 ISTVTELRNRHAQGETTTGINVRKGAITNILEENVVQPLLVSTSAITLSTETVRSILKID 834
I VTELR++H GE GI+VR+ TN EE+++QP+LVSTSAITL++E V+SIL+ID
Sbjct: 463 IKVVTELRSKHENGELNDGISVRRSGTTNTYEEHILQPVLVSTSAITLASECVKSILRID 522
Query: 835 DI 836
DI
Sbjct: 523 DI 524
Score = 330 bits (845), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 167/284 (58%), Positives = 225/284 (79%), Gaps = 2/284 (0%)
Query: 77 IHPAAKMMDHKVVVSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDL 136
I P ++ ++V+DY MD++LKEERAY+LNI K+IKKA CNVLL+QKSILRDA++DL
Sbjct: 241 ISPPKPDTENNIIVNDYRQMDKILKEERAYLLNICKKIKKAKCNVLLIQKSILRDAVNDL 300
Query: 137 AIHFLDKIKVLVVKDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRF 196
A+HFL K+ ++VVKDIERE+IEF+ K L +PIA ++ F + L SADLVEEI + S+
Sbjct: 301 ALHFLSKLNIMVVKDIEREEIEFLSKGLGCKPIADIELFTEDRLGSADLVEEIDSDGSKI 360
Query: 197 VKISGIQNPGR--TLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIE 254
V+++GI+N T++VV+RG+N +++DE RSLHDALCV+RCLVK+R LIAGGGAPEIE
Sbjct: 361 VRVTGIRNNNARPTVSVVIRGANNMIIDETERSLHDALCVIRCLVKERGLIAGGGAPEIE 420
Query: 255 LSLKLTKYADTVSGIDAYCFRAFAQALEVIPLTLAENAGLNPISTVTELRNRHAQGETTT 314
+S +L+K A ++ G+ A+ ++ FA ALEVIP TLAENAGLN I VTELR++H GE
Sbjct: 421 ISRRLSKEARSMEGVQAFIWQEFASALEVIPTTLAENAGLNSIKVVTELRSKHENGELND 480
Query: 315 GINVRKGAITNILEENVVQPLLVSTSAITLSTETVRSILKIDDI 358
GI+VR+ TN EE+++QP+LVSTSAITL++E V+SIL+IDDI
Sbjct: 481 GISVRRSGTTNTYEEHILQPVLVSTSAITLASECVKSILRIDDI 524
Score = 100 bits (248), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 64/89 (71%)
Query: 9 SKNSKSSAFKDKSKATDIRNSNIGAAKAVADAIRTSLGPRGMDKMIQASNGEVTITNDGA 68
+K ++ FK+K K ++R +NI AA++VADAIRTSLGP+GMDKMI+ S GE+ I+NDG
Sbjct: 3 AKVPSNATFKNKEKPQEVRKANIIAARSVADAIRTSLGPKGMDKMIKTSRGEIIISNDGH 62
Query: 69 TILKQMNVIHPAAKMMDHKVVVSDYSAMD 97
TILKQM ++HP A+M+ D A D
Sbjct: 63 TILKQMAILHPVARMLVEVSAAQDSEAGD 91
>sp|Q6CL82|TCPD_KLULA T-complex protein 1 subunit delta OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=CCT4 PE=3 SV=1
Length = 530
Score = 514 bits (1324), Expect = e-144, Method: Compositional matrix adjust.
Identities = 266/482 (55%), Positives = 366/482 (75%), Gaps = 37/482 (7%)
Query: 358 ILVELSKAQDIEAGDGTTSVVIVAGSLLEAAEKLLHKGIHPTTISDAFQKAAAKCVEILT 417
+LVE+S AQD+EAGDGTTSVVI+ G+LL AAEKLL+KGIHPT I+++FQ+AA + VEIL
Sbjct: 79 MLVEVSGAQDVEAGDGTTSVVIMTGALLGAAEKLLNKGIHPTIIAESFQRAAERSVEILL 138
Query: 418 EMSTPITLADRENLIKSAATSLNSKVVSQQASLLAPIAVDAVLKVVNPQRDTNVDLKDIK 477
MST I+L D+E L+++A+TSL+SK+VSQ +S LAP+AVD VL + + TNVDL DI+
Sbjct: 139 NMSTKISLDDKEALVRAASTSLSSKIVSQHSSFLAPLAVDCVLSIAS-HDSTNVDLNDIR 197
Query: 478 VIRKLGGTVEDTELVDGLVFTQKSANV-NGPKRVEKAKIGLIQFCISPPKTDMDHKVVVS 536
+I+K+GGT++DTE+V+G+V TQ + GP R+EKA+IGLIQF ISPPK D ++ +VV+
Sbjct: 198 LIKKVGGTIDDTEMVNGVVLTQNAVKTAGGPTRIEKARIGLIQFQISPPKPDTENNIVVN 257
Query: 537 DYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKIKVLVVKD 596
DY MD++LKEERAY+LNI K+IKKA CNVLL+QKSILRDA++DLA+HFL K+ ++VV+D
Sbjct: 258 DYRQMDKILKEERAYLLNICKKIKKAKCNVLLIQKSILRDAVNDLALHFLSKLGIMVVRD 317
Query: 597 IEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISGIQ--NPGRTL 654
IER+++EF+ K+L +PI+ ++ F + L SAD+VEE+ + S V I+G++ N T+
Sbjct: 318 IERDEVEFLSKSLGCKPISDVELFTEDRLGSADVVEEVESDGSNIVTITGVKTTNKNPTV 377
Query: 655 TVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYADTVSGI 714
+VV+RG+N +VLDE RSLHDALCV+RCLVK+RALIAGGGAPEIE+S +L K A T+ G
Sbjct: 378 SVVIRGANNMVLDETERSLHDALCVIRCLVKERALIAGGGAPEIEVSYRLMKEARTMEG- 436
Query: 715 DAYCFRALIAGGGAPEIELSLKLTKYADTVSGIDAYCFRAFAQALEVIPLTLAENAGLNP 774
++A+ ++ +A+ALEVIP TLAENAGLN
Sbjct: 437 --------------------------------VEAFVWQEYAEALEVIPTTLAENAGLNS 464
Query: 775 ISTVTELRNRHAQGETTTGINVRKGAITNILEENVVQPLLVSTSAITLSTETVRSILKID 834
++ VTELR RH GE+ +GI+VR+ +N E++++QP+LVSTSAI L++E V+SIL+ID
Sbjct: 465 LNVVTELRLRHENGESNSGISVRRSGTSNTYEDHILQPVLVSTSAIRLASECVKSILRID 524
Query: 835 DI 836
DI
Sbjct: 525 DI 526
Score = 323 bits (828), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 162/284 (57%), Positives = 227/284 (79%), Gaps = 2/284 (0%)
Query: 77 IHPAAKMMDHKVVVSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDL 136
I P ++ +VV+DY MD++LKEERAY+LNI K+IKKA CNVLL+QKSILRDA++DL
Sbjct: 243 ISPPKPDTENNIVVNDYRQMDKILKEERAYLLNICKKIKKAKCNVLLIQKSILRDAVNDL 302
Query: 137 AIHFLDKIKVLVVKDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRF 196
A+HFL K+ ++VV+DIER+++EF+ K+L +PI+ ++ F + L SAD+VEE+ + S
Sbjct: 303 ALHFLSKLGIMVVRDIERDEVEFLSKSLGCKPISDVELFTEDRLGSADVVEEVESDGSNI 362
Query: 197 VKISGIQ--NPGRTLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIE 254
V I+G++ N T++VV+RG+N +VLDE RSLHDALCV+RCLVK+RALIAGGGAPEIE
Sbjct: 363 VTITGVKTTNKNPTVSVVIRGANNMVLDETERSLHDALCVIRCLVKERALIAGGGAPEIE 422
Query: 255 LSLKLTKYADTVSGIDAYCFRAFAQALEVIPLTLAENAGLNPISTVTELRNRHAQGETTT 314
+S +L K A T+ G++A+ ++ +A+ALEVIP TLAENAGLN ++ VTELR RH GE+ +
Sbjct: 423 VSYRLMKEARTMEGVEAFVWQEYAEALEVIPTTLAENAGLNSLNVVTELRLRHENGESNS 482
Query: 315 GINVRKGAITNILEENVVQPLLVSTSAITLSTETVRSILKIDDI 358
GI+VR+ +N E++++QP+LVSTSAI L++E V+SIL+IDDI
Sbjct: 483 GISVRRSGTSNTYEDHILQPVLVSTSAIRLASECVKSILRIDDI 526
Score = 100 bits (249), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 61/76 (80%)
Query: 9 SKNSKSSAFKDKSKATDIRNSNIGAAKAVADAIRTSLGPRGMDKMIQASNGEVTITNDGA 68
+K ++ FK++ K ++R +NI AA+AVADAIRTSLGP+GMDKMI+ S G++ I+NDG
Sbjct: 5 AKQPSNATFKNREKPQEVRKANIIAARAVADAIRTSLGPKGMDKMIKTSRGDIIISNDGH 64
Query: 69 TILKQMNVIHPAAKMM 84
TILKQM ++HP AKM+
Sbjct: 65 TILKQMAILHPVAKML 80
>sp|Q75A36|TCPD_ASHGO T-complex protein 1 subunit delta OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=CCT4
PE=3 SV=1
Length = 529
Score = 510 bits (1313), Expect = e-143, Method: Compositional matrix adjust.
Identities = 268/484 (55%), Positives = 361/484 (74%), Gaps = 41/484 (8%)
Query: 358 ILVELSKAQDIEAGDGTTSVVIVAGSLLEAAEKLLHKGIHPTTISDAFQKAAAKCVEILT 417
+LVE+S AQD EAGDGTTSVVI+ G+LL AAEKLL KGIHPT I+++FQ+A + VE+L
Sbjct: 78 MLVEVSAAQDSEAGDGTTSVVILTGALLGAAEKLLAKGIHPTIIAESFQRAGQRAVEVLL 137
Query: 418 EMSTPITLADRENLIKSAATSLNSKVVSQQASLLAPIAVDAVLKVVNPQRDTNVDLKDIK 477
MS I+L DR L+++A+TSL+SK+VSQ ++ LAP+AVD VL + N + TNVDL DI+
Sbjct: 138 GMSKRISLQDRAELVRAASTSLSSKIVSQYSTFLAPLAVDCVLSLTN-EASTNVDLNDIR 196
Query: 478 VIRKLGGTVEDTELVDGLVFTQ---KSANVNGPKRVEKAKIGLIQFCISPPKTDMDHKVV 534
+++K+GGT++DTE+VDG+V TQ KSA GP R+EKAKIGLIQF ISPPK D ++ +V
Sbjct: 197 LVKKVGGTIDDTEMVDGVVLTQNIVKSAG--GPVRMEKAKIGLIQFQISPPKPDTENNIV 254
Query: 535 VSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKIKVLVV 594
V+DY MD++LKEERAY+L I K+IKKA CNVLL+QKSILRDA+++LA+HFL K+ ++V+
Sbjct: 255 VNDYRQMDKILKEERAYLLKICKKIKKAKCNVLLIQKSILRDAVNELALHFLSKLNIVVI 314
Query: 595 KDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISGIQ--NPGR 652
KD+ER++IEF+ K+L +PI+ ++ F + L SADLVEEI + ++ VKI+GI+ N
Sbjct: 315 KDVERDEIEFLSKSLGCKPISDVELFTEDRLGSADLVEEIDSDGTKIVKITGIKTGNAKP 374
Query: 653 TLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYADTVS 712
T++ +VRG+N +VLDE RSLHDALCV+RCLVK+RALIAGGGAPEIE+S + + + +
Sbjct: 375 TVSCIVRGANNVVLDETERSLHDALCVIRCLVKERALIAGGGAPEIEVSRTIMRESRAMQ 434
Query: 713 GIDAYCFRALIAGGGAPEIELSLKLTKYADTVSGIDAYCFRAFAQALEVIPLTLAENAGL 772
G ++A+ ++ FA+ALEVIP TLAENAGL
Sbjct: 435 G---------------------------------VEAFVWQEFAEALEVIPTTLAENAGL 461
Query: 773 NPISTVTELRNRHAQGETTTGINVRKGAITNILEENVVQPLLVSTSAITLSTETVRSILK 832
N I VTELR+RH GET GI+VR+ TN +E+++QP+LVSTSAITL+ E V+SIL+
Sbjct: 462 NSIKVVTELRSRHESGETNAGISVRRSGTTNTYDEHILQPVLVSTSAITLAAECVKSILR 521
Query: 833 IDDI 836
IDDI
Sbjct: 522 IDDI 525
Score = 326 bits (836), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 163/284 (57%), Positives = 224/284 (78%), Gaps = 2/284 (0%)
Query: 77 IHPAAKMMDHKVVVSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDL 136
I P ++ +VV+DY MD++LKEERAY+L I K+IKKA CNVLL+QKSILRDA+++L
Sbjct: 242 ISPPKPDTENNIVVNDYRQMDKILKEERAYLLKICKKIKKAKCNVLLIQKSILRDAVNEL 301
Query: 137 AIHFLDKIKVLVVKDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRF 196
A+HFL K+ ++V+KD+ER++IEF+ K+L +PI+ ++ F + L SADLVEEI + ++
Sbjct: 302 ALHFLSKLNIVVIKDVERDEIEFLSKSLGCKPISDVELFTEDRLGSADLVEEIDSDGTKI 361
Query: 197 VKISGIQ--NPGRTLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIE 254
VKI+GI+ N T++ +VRG+N +VLDE RSLHDALCV+RCLVK+RALIAGGGAPEIE
Sbjct: 362 VKITGIKTGNAKPTVSCIVRGANNVVLDETERSLHDALCVIRCLVKERALIAGGGAPEIE 421
Query: 255 LSLKLTKYADTVSGIDAYCFRAFAQALEVIPLTLAENAGLNPISTVTELRNRHAQGETTT 314
+S + + + + G++A+ ++ FA+ALEVIP TLAENAGLN I VTELR+RH GET
Sbjct: 422 VSRTIMRESRAMQGVEAFVWQEFAEALEVIPTTLAENAGLNSIKVVTELRSRHESGETNA 481
Query: 315 GINVRKGAITNILEENVVQPLLVSTSAITLSTETVRSILKIDDI 358
GI+VR+ TN +E+++QP+LVSTSAITL+ E V+SIL+IDDI
Sbjct: 482 GISVRRSGTTNTYDEHILQPVLVSTSAITLAAECVKSILRIDDI 525
Score = 100 bits (249), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 64/87 (73%)
Query: 11 NSKSSAFKDKSKATDIRNSNIGAAKAVADAIRTSLGPRGMDKMIQASNGEVTITNDGATI 70
++ ++ FK++ K ++R +NI AA+AVADAIRTSLGP+GMDKMI+ + GE+ I+NDG TI
Sbjct: 6 SASNATFKNREKPQEVRKANIIAARAVADAIRTSLGPKGMDKMIKTARGEILISNDGHTI 65
Query: 71 LKQMNVIHPAAKMMDHKVVVSDYSAMD 97
LKQM ++HP AKM+ D A D
Sbjct: 66 LKQMAILHPVAKMLVEVSAAQDSEAGD 92
>sp|Q6FQT2|TCPD_CANGA T-complex protein 1 subunit delta OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=CCT4 PE=3 SV=1
Length = 529
Score = 508 bits (1309), Expect = e-143, Method: Compositional matrix adjust.
Identities = 266/482 (55%), Positives = 359/482 (74%), Gaps = 37/482 (7%)
Query: 358 ILVELSKAQDIEAGDGTTSVVIVAGSLLEAAEKLLHKGIHPTTISDAFQKAAAKCVEILT 417
+LV++S AQD EAGDGTTSVVI+ G+LL AA++LL+KGIHPT I+++FQKAA + VE L
Sbjct: 78 MLVDVSAAQDSEAGDGTTSVVILTGALLGAADRLLNKGIHPTIIAESFQKAARRSVETLL 137
Query: 418 EMSTPITLADRENLIKSAATSLNSKVVSQQASLLAPIAVDAVLKVVNPQRDTNVDLKDIK 477
E+ P++L DRE+LI++A+TSL+SK+VSQ +S L+P+AVDAVL + T VDL DI+
Sbjct: 138 EICHPVSLDDREDLIRAASTSLSSKIVSQYSSFLSPLAVDAVLSITEKDSKT-VDLNDIR 196
Query: 478 VIRKLGGTVEDTELVDGLVFTQKSANV-NGPKRVEKAKIGLIQFCISPPKTDMDHKVVVS 536
+++K+GGT+ DTE+VDG+V TQ GP EKAKIGLIQF ISPPK D ++ +VVS
Sbjct: 197 LVKKVGGTIGDTEMVDGVVLTQTVVKTAGGPTMKEKAKIGLIQFQISPPKPDTENNIVVS 256
Query: 537 DYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKIKVLVVKD 596
DY MD++LKEERAY+LNI K+IKKA CNVLL+QKSILRDA++DLA+HFL K+ ++V+KD
Sbjct: 257 DYRQMDKILKEERAYLLNICKKIKKAKCNVLLIQKSILRDAVNDLALHFLAKLGIMVIKD 316
Query: 597 IEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISGIQ--NPGRTL 654
IERE+IEF+ K+L +PI+ ++ F + L SADLVEEI + ++ VK SG++ N T+
Sbjct: 317 IEREEIEFLSKSLGCKPISDVELFTEDRLGSADLVEEIDSDGTKIVKFSGVKGVNAKPTV 376
Query: 655 TVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYADTVSGI 714
+V++RG+N ++LDE RSLHDALCV+RCLVK+R LIAGGGAPEIE+S +L + + ++ G+
Sbjct: 377 SVIIRGANSMILDETERSLHDALCVIRCLVKERGLIAGGGAPEIEISRRLERESRSMEGV 436
Query: 715 DAYCFRALIAGGGAPEIELSLKLTKYADTVSGIDAYCFRAFAQALEVIPLTLAENAGLNP 774
+AY ++ FAQALEVIP TLAENAGLN
Sbjct: 437 ---------------------------------EAYIWQEFAQALEVIPTTLAENAGLNS 463
Query: 775 ISTVTELRNRHAQGETTTGINVRKGAITNILEENVVQPLLVSTSAITLSTETVRSILKID 834
I +TELR+RH G+ GI+VR+ TN EE+++QP+LVSTSAITL++E V+SIL+ID
Sbjct: 464 IKVITELRSRHENGDVNEGISVRRSGTTNTYEEHILQPVLVSTSAITLASECVKSILRID 523
Query: 835 DI 836
DI
Sbjct: 524 DI 525
Score = 332 bits (850), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 166/284 (58%), Positives = 226/284 (79%), Gaps = 2/284 (0%)
Query: 77 IHPAAKMMDHKVVVSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDL 136
I P ++ +VVSDY MD++LKEERAY+LNI K+IKKA CNVLL+QKSILRDA++DL
Sbjct: 242 ISPPKPDTENNIVVSDYRQMDKILKEERAYLLNICKKIKKAKCNVLLIQKSILRDAVNDL 301
Query: 137 AIHFLDKIKVLVVKDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRF 196
A+HFL K+ ++V+KDIERE+IEF+ K+L +PI+ ++ F + L SADLVEEI + ++
Sbjct: 302 ALHFLAKLGIMVIKDIEREEIEFLSKSLGCKPISDVELFTEDRLGSADLVEEIDSDGTKI 361
Query: 197 VKISGIQ--NPGRTLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIE 254
VK SG++ N T++V++RG+N ++LDE RSLHDALCV+RCLVK+R LIAGGGAPEIE
Sbjct: 362 VKFSGVKGVNAKPTVSVIIRGANSMILDETERSLHDALCVIRCLVKERGLIAGGGAPEIE 421
Query: 255 LSLKLTKYADTVSGIDAYCFRAFAQALEVIPLTLAENAGLNPISTVTELRNRHAQGETTT 314
+S +L + + ++ G++AY ++ FAQALEVIP TLAENAGLN I +TELR+RH G+
Sbjct: 422 ISRRLERESRSMEGVEAYIWQEFAQALEVIPTTLAENAGLNSIKVITELRSRHENGDVNE 481
Query: 315 GINVRKGAITNILEENVVQPLLVSTSAITLSTETVRSILKIDDI 358
GI+VR+ TN EE+++QP+LVSTSAITL++E V+SIL+IDDI
Sbjct: 482 GISVRRSGTTNTYEEHILQPVLVSTSAITLASECVKSILRIDDI 525
Score = 103 bits (256), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 64/88 (72%)
Query: 10 KNSKSSAFKDKSKATDIRNSNIGAAKAVADAIRTSLGPRGMDKMIQASNGEVTITNDGAT 69
K+ ++ FK+K K ++R +NI AA+AVADAIRTSLGP+GMDKMI+ S GE+ I+NDG T
Sbjct: 5 KSVSNATFKNKEKPQEVRRANIVAARAVADAIRTSLGPKGMDKMIKTSRGEIIISNDGHT 64
Query: 70 ILKQMNVIHPAAKMMDHKVVVSDYSAMD 97
ILKQM ++HP AKM+ D A D
Sbjct: 65 ILKQMAILHPVAKMLVDVSAAQDSEAGD 92
>sp|Q6C100|TCPD_YARLI T-complex protein 1 subunit delta OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=CCT4 PE=3 SV=1
Length = 527
Score = 474 bits (1219), Expect = e-132, Method: Compositional matrix adjust.
Identities = 246/483 (50%), Positives = 339/483 (70%), Gaps = 40/483 (8%)
Query: 358 ILVELSKAQDIEAGDGTTSVVIVAGSLLEAAEKLLHKGIHPTTISDAFQKAAAKCVEILT 417
+LV+LS +QD AGDGTTSVVI+AGSLL AA+KLL KGIHP+ I++ FQKAA + E++
Sbjct: 77 MLVDLSASQDSVAGDGTTSVVILAGSLLGAADKLLKKGIHPSIIAENFQKAAQRAAEVVM 136
Query: 418 EMSTPITLADRENLIKSAATSLNSKVVSQQASLLAPIAVDAVLKVVN--PQRDTNVDLKD 475
+MS PI L+DRE LI++A+TSLNSK+VSQ +S LAP+ VDA L+ P+ +DL D
Sbjct: 137 DMSKPIDLSDRETLIRAASTSLNSKIVSQFSSTLAPMLVDAALQAAKKTPEGGLTLDLND 196
Query: 476 IKVIRKLGGTVEDTELVDGLVFTQKSA-NVNGPKRVEKAKIGLIQFCISPPKTDMDHKVV 534
I++I+ LGGT+EDT L +GLV + N GP R+EKAKIGLIQF +S PK DM++ +V
Sbjct: 197 IRIIKSLGGTIEDTTLANGLVLNNYAVKNAGGPSRMEKAKIGLIQFQLSAPKPDMENHIV 256
Query: 535 VSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKIKVLVV 594
V+DY MD++LKEER YIL + K IKK+ CNVLL+QKSILRDA+S+LA+HFL K+ ++V+
Sbjct: 257 VNDYRQMDKILKEERQYILGLAKAIKKSKCNVLLIQKSILRDAVSELALHFLAKLNIMVI 316
Query: 595 KDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISGIQNPGRTL 654
KDIER+DIEF+ ++ +P+A ++ F + L S DLVEE+ + S+ V+ S + T+
Sbjct: 317 KDIERDDIEFISRSTGAKPVADIEAFTEDKLGSCDLVEEVESSGSKTVRFSS-REGSNTV 375
Query: 655 TVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYADTVSGI 714
+++VRG+N LV+DE RSLHDALCV+R L + AL+ GGGA E++++ + K +
Sbjct: 376 SILVRGANDLVIDETERSLHDALCVLRSLFRVPALVPGGGACEVQVAQVIGKES------ 429
Query: 715 DAYCFRALIAGGGAPEIELSLKLTKYADTVSGIDAYCFRAFAQALEVIPLTLAENAGLNP 774
RA+ G A C+ F+ A+ VIP TLAENAGLNP
Sbjct: 430 -----RAM----------------------DGASAICYEEFSNAMLVIPTTLAENAGLNP 462
Query: 775 ISTVTELRNRHAQGETTTGINVRKGAITNIL-EENVVQPLLVSTSAITLSTETVRSILKI 833
++ VTELR RH +GE GI+VR+G T+I+ EE+V+QP LV+TSAITL+ E + +L+I
Sbjct: 463 VNVVTELRVRHEKGEVNAGISVRRG--TSIMVEEHVIQPALVTTSAITLAAECAKGLLRI 520
Query: 834 DDI 836
DDI
Sbjct: 521 DDI 523
Score = 299 bits (765), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 147/289 (50%), Positives = 210/289 (72%), Gaps = 5/289 (1%)
Query: 71 LKQMNVIHPAAKMMDHKVVVSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILR 130
L Q + P M +H +VV+DY MD++LKEER YIL + K IKK+ CNVLL+QKSILR
Sbjct: 239 LIQFQLSAPKPDMENH-IVVNDYRQMDKILKEERQYILGLAKAIKKSKCNVLLIQKSILR 297
Query: 131 DAISDLAIHFLDKIKVLVVKDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIP 190
DA+S+LA+HFL K+ ++V+KDIER+DIEF+ ++ +P+A ++ F + L S DLVEE+
Sbjct: 298 DAVSELALHFLAKLNIMVIKDIERDDIEFISRSTGAKPVADIEAFTEDKLGSCDLVEEVE 357
Query: 191 AGNSRFVKISGIQNPGRTLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGA 250
+ S+ V+ S + T++++VRG+N LV+DE RSLHDALCV+R L + AL+ GGGA
Sbjct: 358 SSGSKTVRFSS-REGSNTVSILVRGANDLVIDETERSLHDALCVLRSLFRVPALVPGGGA 416
Query: 251 PEIELSLKLTKYADTVSGIDAYCFRAFAQALEVIPLTLAENAGLNPISTVTELRNRHAQG 310
E++++ + K + + G A C+ F+ A+ VIP TLAENAGLNP++ VTELR RH +G
Sbjct: 417 CEVQVAQVIGKESRAMDGASAICYEEFSNAMLVIPTTLAENAGLNPVNVVTELRVRHEKG 476
Query: 311 ETTTGINVRKGAITNIL-EENVVQPLLVSTSAITLSTETVRSILKIDDI 358
E GI+VR+G T+I+ EE+V+QP LV+TSAITL+ E + +L+IDDI
Sbjct: 477 EVNAGISVRRG--TSIMVEEHVIQPALVTTSAITLAAECAKGLLRIDDI 523
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/70 (67%), Positives = 58/70 (82%)
Query: 15 SAFKDKSKATDIRNSNIGAAKAVADAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQM 74
S FK+K K ++R SNI AA+AVADAIRTSLGP+GMDKMIQ + G+V I+NDG TIL+ M
Sbjct: 9 SGFKNKEKPLEVRKSNILAARAVADAIRTSLGPKGMDKMIQTARGQVIISNDGNTILQHM 68
Query: 75 NVIHPAAKMM 84
V+HPAAKM+
Sbjct: 69 AVMHPAAKML 78
>sp|O28821|THSB_ARCFU Thermosome subunit beta OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=thsB PE=3 SV=1
Length = 545
Score = 297 bits (760), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 179/483 (37%), Positives = 278/483 (57%), Gaps = 44/483 (9%)
Query: 358 ILVELSKAQDIEAGDGTTSVVIVAGSLLEAAEKLLHKGIHPTTISDAFQKAAAKCVEILT 417
+++E++K QD E GDGTT+ V++AG LL+ AE+LL + IHP I++ ++ AA K +EIL
Sbjct: 81 MIIEVAKTQDNEVGDGTTTAVVLAGELLKRAEELLDQEIHPAIIANGYRYAAEKALEILN 140
Query: 418 EMSTPITLADRENLIKSAATSLNSKVVSQQASLLAPIAVDAVLKVV---NPQRDTNVDLK 474
E++ PI+ D E L K A T++ K LA IAV+AV + N Q + N D
Sbjct: 141 EIAIPISKDDDEILKKIATTAMTGKGAEVAIDKLAEIAVNAVKMIAEESNGQVEVNTDY- 199
Query: 475 DIKVIRKLGGTVEDTELVDGLVFTQKSANVNGPKRVEKAKIGLIQFCISPPKTDMDHKVV 534
IK+ ++ GG++E+TELVDG+V ++ + PKRVE AKI L+ + +T++D K+
Sbjct: 200 -IKIEKRQGGSIEETELVDGIVLDKEVVHPGMPKRVENAKILLLDSALEVKETEIDAKIR 258
Query: 535 VSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKIKVLVV 594
++D + + +++E A + +V +I AG NV+ QK I DLA ++L K VL V
Sbjct: 259 ITDPEKLQKFIEQEEAMLKEMVDKIVNAGANVVFCQKG-----IDDLAQYYLAKAGVLAV 313
Query: 595 KDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISGIQNPGRTL 654
+ +++ D+E + K + + L E L A LVEE G+ + V ++G +NP + +
Sbjct: 314 RRVKKSDMEKLAKATGAKVLTDLRDISSEDLGEAALVEERKVGDEKMVFVTGCKNP-KAV 372
Query: 655 TVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYADTVSGI 714
T++VRG + V++E AR + DA+ V C V+ ++ G GAPEIE+SLKL ++A ++ G
Sbjct: 373 TILVRGGTEHVVEEIARGIEDAVRAVACAVEDGKVVVGAGAPEIEVSLKLREWAPSLGG- 431
Query: 715 DAYCFRALIAGGGAPEIELSLKLTKYADTVSGIDAYCFRAFAQALEVIPLTLAENAGLNP 774
R +A AFA ALE+IP TLAENAGL+P
Sbjct: 432 -----REQLA---------------------------VEAFATALEIIPRTLAENAGLDP 459
Query: 775 ISTVTELRNRHAQGETTTGINVRKGAITNILEENVVQPLLVSTSAITLSTETVRSILKID 834
I + EL+ H +G+ G++V G + ++ E V +PL V T AI +TE IL+ID
Sbjct: 460 IDVLVELKAAHEKGQKYAGVDVDTGKVVDMKERGVFEPLRVKTQAIGSATEVAVMILRID 519
Query: 835 DIV 837
DI+
Sbjct: 520 DII 522
Score = 196 bits (498), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 105/276 (38%), Positives = 166/276 (60%), Gaps = 6/276 (2%)
Query: 84 MDHKVVVSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDK 143
+D K+ ++D + + +++E A + +V +I AG NV+ QK I DLA ++L K
Sbjct: 253 IDAKIRITDPEKLQKFIEQEEAMLKEMVDKIVNAGANVVFCQKGI-----DDLAQYYLAK 307
Query: 144 IKVLVVKDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISGIQ 203
VL V+ +++ D+E + K + + L E L A LVEE G+ + V ++G +
Sbjct: 308 AGVLAVRRVKKSDMEKLAKATGAKVLTDLRDISSEDLGEAALVEERKVGDEKMVFVTGCK 367
Query: 204 NPGRTLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYA 263
NP + +T++VRG + V++E AR + DA+ V C V+ ++ G GAPEIE+SLKL ++A
Sbjct: 368 NP-KAVTILVRGGTEHVVEEIARGIEDAVRAVACAVEDGKVVVGAGAPEIEVSLKLREWA 426
Query: 264 DTVSGIDAYCFRAFAQALEVIPLTLAENAGLNPISTVTELRNRHAQGETTTGINVRKGAI 323
++ G + AFA ALE+IP TLAENAGL+PI + EL+ H +G+ G++V G +
Sbjct: 427 PSLGGREQLAVEAFATALEIIPRTLAENAGLDPIDVLVELKAAHEKGQKYAGVDVDTGKV 486
Query: 324 TNILEENVVQPLLVSTSAITLSTETVRSILKIDDIL 359
++ E V +PL V T AI +TE IL+IDDI+
Sbjct: 487 VDMKERGVFEPLRVKTQAIGSATEVAVMILRIDDII 522
Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 49/60 (81%)
Query: 25 DIRNSNIGAAKAVADAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMNVIHPAAKMM 84
D + NI AA+ +A+A+R++LGP+GMDKM+ S G+V ITNDG TILK+++V HPAAKM+
Sbjct: 23 DAQRMNIMAARVIAEAVRSTLGPKGMDKMLVDSLGDVVITNDGVTILKEIDVEHPAAKMI 82
>sp|O24730|THSB_THEK1 Thermosome subunit beta OS=Thermococcus sp. (strain KS-1) GN=thsB
PE=3 SV=2
Length = 546
Score = 297 bits (760), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 173/481 (35%), Positives = 275/481 (57%), Gaps = 40/481 (8%)
Query: 358 ILVELSKAQDIEAGDGTTSVVIVAGSLLEAAEKLLHKGIHPTTISDAFQKAAAKCVEILT 417
++VE++K QD EAGDGTT+ V++AG LL AE+LL + IHP+ I + AA K EIL
Sbjct: 81 MMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEKAQEILD 140
Query: 418 EMSTPITLADRENLIKSAATSLNSKVVSQQASLLAPIAVDAVLKVVNPQRDT-NVDLKDI 476
E++ + + DRE L K+A TS+ K ++ LA IAV+AV +V +T VDL +I
Sbjct: 141 EIAKDVDVEDREILKKAAVTSITGKAAEEEREYLAEIAVEAVKQVAEKVGETYKVDLDNI 200
Query: 477 KVIRKLGGTVEDTELVDGLVFTQKSANVNGPKRVEKAKIGLIQFCISPPKTDMDHKVVVS 536
K +K GG+V+DT+L+ G+V ++ + PKRVE AKI LI + +T+ D ++ ++
Sbjct: 201 KFEKKEGGSVKDTQLIKGVVIDKEVVHPGMPKRVEGAKIALINEALEVKETETDAEIRIT 260
Query: 537 DYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKIKVLVVKD 596
+ L++E + +V +IK+ G NV+ VQK I DLA H+L K ++ V+
Sbjct: 261 SPEQLQAFLEQEEKMLREMVDKIKEVGANVVFVQKG-----IDDLAQHYLAKYGIMAVRR 315
Query: 597 IEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISGIQNPGRTLTV 656
+++ D+E + K + + ++ PE L A+LVE+ + + G +NP + +T+
Sbjct: 316 VKKSDMEKLAKATGAKIVTNVRDLTPEDLGEAELVEQRKVAGENMIFVEGCKNP-KAVTI 374
Query: 657 VVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYADTVSGIDA 716
++RG + V+DE R+L DA+ VV+ +V+ ++A GGAPEIELS++L +Y
Sbjct: 375 LIRGGTEHVVDEVERALEDAVKVVKDIVEDGKIVAAGGAPEIELSIRLDEY--------- 425
Query: 717 YCFRALIAGGGAPEIELSLKLTKYADTVSGIDAYCFRAFAQALEVIPLTLAENAGLNPIS 776
A V G + AFA+AL+VIP TLAENAGL+PI
Sbjct: 426 ------------------------AKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPIE 461
Query: 777 TVTELRNRHAQGETTTGINVRKGAITNILEENVVQPLLVSTSAITLSTETVRSILKIDDI 836
T+ ++ H + T G++V +G ++LE V+ P+ V AI ++E IL+IDD+
Sbjct: 462 TLVKVIAAHKEKGPTIGVDVFEGEPADMLERGVIAPVRVPKQAIKSASEAAIMILRIDDV 521
Query: 837 V 837
+
Sbjct: 522 I 522
Score = 191 bits (485), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 102/292 (34%), Positives = 171/292 (58%), Gaps = 6/292 (2%)
Query: 85 DHKVVVSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKI 144
D ++ ++ + L++E + +V +IK+ G NV+ VQK I DLA H+L K
Sbjct: 254 DAEIRITSPEQLQAFLEQEEKMLREMVDKIKEVGANVVFVQKGI-----DDLAQHYLAKY 308
Query: 145 KVLVVKDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISGIQN 204
++ V+ +++ D+E + K + + ++ PE L A+LVE+ + + G +N
Sbjct: 309 GIMAVRRVKKSDMEKLAKATGAKIVTNVRDLTPEDLGEAELVEQRKVAGENMIFVEGCKN 368
Query: 205 PGRTLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYAD 264
P + +T+++RG + V+DE R+L DA+ VV+ +V+ ++A GGAPEIELS++L +YA
Sbjct: 369 P-KAVTILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKIVAAGGAPEIELSIRLDEYAK 427
Query: 265 TVSGIDAYCFRAFAQALEVIPLTLAENAGLNPISTVTELRNRHAQGETTTGINVRKGAIT 324
V G + AFA+AL+VIP TLAENAGL+PI T+ ++ H + T G++V +G
Sbjct: 428 EVGGKEQLAIEAFAEALKVIPRTLAENAGLDPIETLVKVIAAHKEKGPTIGVDVFEGEPA 487
Query: 325 NILEENVVQPLLVSTSAITLSTETVRSILKIDDILVELSKAQDIEAGDGTTS 376
++LE V+ P+ V AI ++E IL+IDD++ +D E G G +
Sbjct: 488 DMLERGVIAPVRVPKQAIKSASEAAIMILRIDDVIAASKLEKDKEGGKGGSE 539
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 51/73 (69%)
Query: 25 DIRNSNIGAAKAVADAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMNVIHPAAKMM 84
D + NI AA+ +A+ +RT+LGP+GMDKM+ S G++ ITNDGATIL +M++ HPAAKMM
Sbjct: 23 DAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVITNDGATILDEMDIQHPAAKMM 82
Query: 85 DHKVVVSDYSAMD 97
D A D
Sbjct: 83 VEVAKTQDKEAGD 95
>sp|Q9V2S9|THSA_SULSO Thermosome subunit alpha OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=thsA PE=3 SV=2
Length = 559
Score = 296 bits (757), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 183/491 (37%), Positives = 282/491 (57%), Gaps = 50/491 (10%)
Query: 358 ILVELSKAQDIEAGDGTTSVVIVAGSLLEAAEKLLHKGIHPTTISDAFQKAAAKCVEILT 417
+LVE +KAQD E GDGTTS V++AG+LLE AE LL + IHPT I + ++KA K +E+L
Sbjct: 77 LLVEAAKAQDAEVGDGTTSAVVLAGALLEKAESLLDQNIHPTIIIEGYKKAYNKALELLP 136
Query: 418 EMSTPITLAD------RENLIKSAATSLNSKVVSQQASL--LAPIAVDAVLKVVN--PQR 467
++ T I + D R+ L K A T+L SK +++ A L + + +DA++ V P
Sbjct: 137 QLGTRIDIKDLNSSVARDTLRKIAFTTLASKFIAEGAELNKIIDMVIDAIVNVAEPLPNG 196
Query: 468 DTNVDLKDIKVIRKLGGTVEDTELVDGLVFTQKSANVNGPKRVEKAKIGLIQFCISPPKT 527
NV L IK+ +K GG++ED+ LV GLV ++ + P+RV KAKI ++ + K
Sbjct: 197 GYNVSLDLIKIDKKKGGSIEDSVLVKGLVLDKEVVHPGMPRRVTKAKIAVLDAALEVEKP 256
Query: 528 DMDHKVVVSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLD 587
++ K+ ++ + L EE Y+ ++V ++ G NV++ QK I D+A HFL
Sbjct: 257 EISAKISITSPEQIKAFLDEESKYLKDMVDKLASIGANVVICQK-----GIDDIAQHFLA 311
Query: 588 KIKVLVVKDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISGI 647
K +L V+ ++R DIE + K L R I+S+ PE L A+LVEE GN + V I G
Sbjct: 312 KKGILAVRRVKRSDIEKLEKALGARIISSIKDATPEDLGYAELVEERRVGNDKMVFIEGA 371
Query: 648 QNPGRTLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKY 707
+N + + +++RGSN + LDEA RS++DAL +R ++ + ++ GGGA E+EL++KL +Y
Sbjct: 372 KNL-KAVNILLRGSNDMALDEAERSINDALHALRNILLEPVILPGGGAIELELAMKLREY 430
Query: 708 ADTVSGIDAYCFRALIAGGGAPEIELSLKLTKYADTVSGIDAYCFRAFAQALEVIPLTLA 767
A +V G + AFA ALE IPL LA
Sbjct: 431 ---------------------------------ARSVGGKEQLAIEAFADALEEIPLILA 457
Query: 768 ENAGLNPISTVTELRNRHAQGETTTGINVRKGAIT-NILEENVVQPLLVSTSAITLSTET 826
E AGL IS++ +LR RHA+G + TG++V G I ++ N+++P+ V + + +TE
Sbjct: 458 ETAGLEAISSLMDLRARHAKGLSNTGVDVIGGKIVDDVYALNIIEPIRVKSQVLKSATEA 517
Query: 827 VRSILKIDDIV 837
+ILKIDD++
Sbjct: 518 ATAILKIDDLI 528
Score = 197 bits (502), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 111/289 (38%), Positives = 176/289 (60%), Gaps = 7/289 (2%)
Query: 87 KVVVSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKIKV 146
K+ ++ + L EE Y+ ++V ++ G NV++ QK I D+A HFL K +
Sbjct: 261 KISITSPEQIKAFLDEESKYLKDMVDKLASIGANVVICQK-----GIDDIAQHFLAKKGI 315
Query: 147 LVVKDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISGIQNPG 206
L V+ ++R DIE + K L R I+S+ PE L A+LVEE GN + V I G +N
Sbjct: 316 LAVRRVKRSDIEKLEKALGARIISSIKDATPEDLGYAELVEERRVGNDKMVFIEGAKNL- 374
Query: 207 RTLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYADTV 266
+ + +++RGSN + LDEA RS++DAL +R ++ + ++ GGGA E+EL++KL +YA +V
Sbjct: 375 KAVNILLRGSNDMALDEAERSINDALHALRNILLEPVILPGGGAIELELAMKLREYARSV 434
Query: 267 SGIDAYCFRAFAQALEVIPLTLAENAGLNPISTVTELRNRHAQGETTTGINVRKGAIT-N 325
G + AFA ALE IPL LAE AGL IS++ +LR RHA+G + TG++V G I +
Sbjct: 435 GGKEQLAIEAFADALEEIPLILAETAGLEAISSLMDLRARHAKGLSNTGVDVIGGKIVDD 494
Query: 326 ILEENVVQPLLVSTSAITLSTETVRSILKIDDILVELSKAQDIEAGDGT 374
+ N+++P+ V + + +TE +ILKIDD++ + + G+G+
Sbjct: 495 VYALNIIEPIRVKSQVLKSATEAATAILKIDDLIAAAPLKSEKKGGEGS 543
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 50/65 (76%)
Query: 20 KSKATDIRNSNIGAAKAVADAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMNVIHP 79
++ D +NI AAK +A+ +R+SLGP+G+DKM+ S G+VTITNDGATI+K M + HP
Sbjct: 14 RTTGRDALRNNILAAKTLAEMLRSSLGPKGLDKMLIDSFGDVTITNDGATIVKDMEIQHP 73
Query: 80 AAKMM 84
AAK++
Sbjct: 74 AAKLL 78
>sp|Q52500|THSB_PYRKO Thermosome subunit beta OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=thsB PE=3 SV=1
Length = 546
Score = 295 bits (756), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 172/481 (35%), Positives = 275/481 (57%), Gaps = 40/481 (8%)
Query: 358 ILVELSKAQDIEAGDGTTSVVIVAGSLLEAAEKLLHKGIHPTTISDAFQKAAAKCVEILT 417
++VE++K QD EAGDGTT+ V++AG LL AE+LL + IHP+ I + AA K EIL
Sbjct: 81 MMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEKAQEILD 140
Query: 418 EMSTPITLADRENLIKSAATSLNSKVVSQQASLLAPIAVDAVLKVVNPQRDT-NVDLKDI 476
E++ + + DRE L K+A TS+ K ++ LA IAV+AV +V +T VDL +I
Sbjct: 141 EIAKDVDVEDREILKKAAVTSITGKAAEEEREYLAEIAVEAVKQVAEKVGETYKVDLDNI 200
Query: 477 KVIRKLGGTVEDTELVDGLVFTQKSANVNGPKRVEKAKIGLIQFCISPPKTDMDHKVVVS 536
K +K GG+V+DT+L+ G+V ++ + PKRVE AKI LI + +T+ D ++ ++
Sbjct: 201 KFEKKEGGSVKDTQLIKGVVIDKEVVHPGMPKRVEGAKIALINEALEVKETETDAEIRIT 260
Query: 537 DYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKIKVLVVKD 596
+ L++E + +V +IK+ G NV+ VQK I DLA H+L K ++ V+
Sbjct: 261 SPEQLQAFLEQEEKMLREMVDKIKEVGANVVFVQKG-----IDDLAQHYLAKYGIMAVRR 315
Query: 597 IEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISGIQNPGRTLTV 656
+++ D+E + K + + ++ PE L A+LVE+ + + G +NP + +T+
Sbjct: 316 VKKSDMEKLAKATGAKIVTNVRDLTPEDLGEAELVEQRKVAGENMIFVEGCKNP-KAVTI 374
Query: 657 VVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYADTVSGIDA 716
++RG + V+DE R+L DA+ VV+ +V+ ++A GGAPEIEL+++L +Y
Sbjct: 375 LIRGGTEHVVDEVERALEDAVKVVKDIVEDGKIVAAGGAPEIELAIRLDEY--------- 425
Query: 717 YCFRALIAGGGAPEIELSLKLTKYADTVSGIDAYCFRAFAQALEVIPLTLAENAGLNPIS 776
A V G + AFA+AL+VIP TLAENAGL+PI
Sbjct: 426 ------------------------AKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPIE 461
Query: 777 TVTELRNRHAQGETTTGINVRKGAITNILEENVVQPLLVSTSAITLSTETVRSILKIDDI 836
T+ ++ H + T G++V +G ++LE V+ P+ V AI ++E IL+IDD+
Sbjct: 462 TLVKVIAAHKEKGPTIGVDVFEGEPADMLERGVIAPVRVPKQAIKSASEAAIMILRIDDV 521
Query: 837 V 837
+
Sbjct: 522 I 522
Score = 190 bits (482), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 101/292 (34%), Positives = 171/292 (58%), Gaps = 6/292 (2%)
Query: 85 DHKVVVSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKI 144
D ++ ++ + L++E + +V +IK+ G NV+ VQK I DLA H+L K
Sbjct: 254 DAEIRITSPEQLQAFLEQEEKMLREMVDKIKEVGANVVFVQKGI-----DDLAQHYLAKY 308
Query: 145 KVLVVKDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISGIQN 204
++ V+ +++ D+E + K + + ++ PE L A+LVE+ + + G +N
Sbjct: 309 GIMAVRRVKKSDMEKLAKATGAKIVTNVRDLTPEDLGEAELVEQRKVAGENMIFVEGCKN 368
Query: 205 PGRTLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYAD 264
P + +T+++RG + V+DE R+L DA+ VV+ +V+ ++A GGAPEIEL+++L +YA
Sbjct: 369 P-KAVTILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKIVAAGGAPEIELAIRLDEYAK 427
Query: 265 TVSGIDAYCFRAFAQALEVIPLTLAENAGLNPISTVTELRNRHAQGETTTGINVRKGAIT 324
V G + AFA+AL+VIP TLAENAGL+PI T+ ++ H + T G++V +G
Sbjct: 428 EVGGKEQLAIEAFAEALKVIPRTLAENAGLDPIETLVKVIAAHKEKGPTIGVDVFEGEPA 487
Query: 325 NILEENVVQPLLVSTSAITLSTETVRSILKIDDILVELSKAQDIEAGDGTTS 376
++LE V+ P+ V AI ++E IL+IDD++ +D E G G +
Sbjct: 488 DMLERGVIAPVRVPKQAIKSASEAAIMILRIDDVIAASKLEKDKEGGKGGSE 539
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 51/73 (69%)
Query: 25 DIRNSNIGAAKAVADAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMNVIHPAAKMM 84
D + NI AA+ +A+ +RT+LGP+GMDKM+ S G++ ITNDGATIL +M++ HPAAKMM
Sbjct: 23 DAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVITNDGATILDEMDIQHPAAKMM 82
Query: 85 DHKVVVSDYSAMD 97
D A D
Sbjct: 83 VEVAKTQDKEAGD 95
>sp|O28045|THSA_ARCFU Thermosome subunit alpha OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=thsA PE=3 SV=1
Length = 545
Score = 295 bits (754), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 176/481 (36%), Positives = 279/481 (58%), Gaps = 40/481 (8%)
Query: 358 ILVELSKAQDIEAGDGTTSVVIVAGSLLEAAEKLLHKGIHPTTISDAFQKAAAKCVEILT 417
+++E++K QD E GDGTT+ V++AG LL+ AE+LL + IHPT I+ ++ AA K VEIL
Sbjct: 81 MIIEVAKTQDNEVGDGTTTAVVLAGELLKKAEELLDQDIHPTVIARGYRMAANKAVEILE 140
Query: 418 EMSTPITLADRENLIKSAATSLNSKVVSQQASLLAPIAVDAVLKVVNPQRD-TNVDLKDI 476
++ I + D E L K AAT++ K L+ + V+AV +V D VD +I
Sbjct: 141 SIAMDIDVEDEETLKKIAATAITGKHSEYALDHLSSLVVEAVKRVAEKVDDRYKVDEDNI 200
Query: 477 KVIRKLGGTVEDTELVDGLVFTQKSANVNGPKRVEKAKIGLIQFCISPPKTDMDHKVVVS 536
K+ ++ GG+V DT+LV+G+V ++ + PKRV+ AKI +++ + +T+ D ++ ++
Sbjct: 201 KLEKRQGGSVADTKLVNGIVIDKEVVHPGMPKRVKNAKIAVLKAALEVKETETDAEIRIT 260
Query: 537 DYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKIKVLVVKD 596
D + + +++E + +V ++ +AG NV+ QK I DLA ++L K +L V+
Sbjct: 261 DPDQLMKFIEQEEKMLKEMVDRLAEAGANVVFCQKGI-----DDLAQYYLAKAGILAVRR 315
Query: 597 IEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISGIQNPGRTLTV 656
+++ DIE + K + I L L A+LVEE G+ + V I G +NP + +T+
Sbjct: 316 VKQSDIEKIAKACGAKIITDLREITSADLGEAELVEERKVGDEKMVFIEGCKNP-KAVTI 374
Query: 657 VVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYADTVSGIDA 716
++RG ++ V+DE RSL DA+ VV+ AL +G
Sbjct: 375 LIRGGSEHVVDEVERSLQDAIKVVKT-----ALESG------------------------ 405
Query: 717 YCFRALIAGGGAPEIELSLKLTKYADTVSGIDAYCFRAFAQALEVIPLTLAENAGLNPIS 776
++AGGGAPEIE++LK+ +A T+ G + AFA ALEVIP LAEN+GL+PI
Sbjct: 406 ----KVVAGGGAPEIEVALKIRDWAPTLGGREQLAAEAFASALEVIPRALAENSGLDPID 461
Query: 777 TVTELRNRHAQGETTTGINVRKGAITNILEENVVQPLLVSTSAITLSTETVRSILKIDDI 836
+ ELR H +G+TT G++V G + + E V++PL V T AIT +TE IL+IDD+
Sbjct: 462 ILVELRKAHEEGKTTYGVDVFSGEVACMKERGVLEPLKVKTQAITSATEVAIMILRIDDV 521
Query: 837 V 837
+
Sbjct: 522 I 522
Score = 199 bits (507), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 106/275 (38%), Positives = 169/275 (61%), Gaps = 6/275 (2%)
Query: 85 DHKVVVSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKI 144
D ++ ++D + + +++E + +V ++ +AG NV+ QK I DLA ++L K
Sbjct: 254 DAEIRITDPDQLMKFIEQEEKMLKEMVDRLAEAGANVVFCQKGI-----DDLAQYYLAKA 308
Query: 145 KVLVVKDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISGIQN 204
+L V+ +++ DIE + K + I L L A+LVEE G+ + V I G +N
Sbjct: 309 GILAVRRVKQSDIEKIAKACGAKIITDLREITSADLGEAELVEERKVGDEKMVFIEGCKN 368
Query: 205 PGRTLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYAD 264
P + +T+++RG ++ V+DE RSL DA+ VV+ ++ ++AGGGAPEIE++LK+ +A
Sbjct: 369 P-KAVTILIRGGSEHVVDEVERSLQDAIKVVKTALESGKVVAGGGAPEIEVALKIRDWAP 427
Query: 265 TVSGIDAYCFRAFAQALEVIPLTLAENAGLNPISTVTELRNRHAQGETTTGINVRKGAIT 324
T+ G + AFA ALEVIP LAEN+GL+PI + ELR H +G+TT G++V G +
Sbjct: 428 TLGGREQLAAEAFASALEVIPRALAENSGLDPIDILVELRKAHEEGKTTYGVDVFSGEVA 487
Query: 325 NILEENVVQPLLVSTSAITLSTETVRSILKIDDIL 359
+ E V++PL V T AIT +TE IL+IDD++
Sbjct: 488 CMKERGVLEPLKVKTQAITSATEVAIMILRIDDVI 522
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 49/60 (81%)
Query: 25 DIRNSNIGAAKAVADAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMNVIHPAAKMM 84
D + NI AA+ +A+A++++LGP+GMDKM+ S G+V ITNDG TILK+M+V HPAAKM+
Sbjct: 23 DAQRMNIMAARVIAEAVKSTLGPKGMDKMLVDSLGDVVITNDGVTILKEMDVEHPAAKMI 82
>sp|Q9V2Q7|THS_PYRAB Thermosome subunit OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=ths
PE=3 SV=1
Length = 550
Score = 293 bits (750), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 172/482 (35%), Positives = 276/482 (57%), Gaps = 42/482 (8%)
Query: 358 ILVELSKAQDIEAGDGTTSVVIVAGSLLEAAEKLLHKGIHPTTISDAFQKAAAKCVEILT 417
++VE++K QD EAGDGTT+ V++AG LL+ AE+LL + IHP+ + + AA K EIL
Sbjct: 81 MMVEVAKTQDKEAGDGTTTAVVIAGELLKKAEELLDQNIHPSIVIKGYMLAAEKAQEILD 140
Query: 418 EMSTPITLADRENLIKSAATSLNSKVVSQQASLLAPIAVDAVLKVVNPQRDT--NVDLKD 475
++ + D E L+K+A T++ K ++ LA +AV+AV K+V ++D VD+ +
Sbjct: 141 SIAKEVKPDDEEVLLKAAMTAITGKAAEEEREYLAKLAVEAV-KLVAEEKDGKFKVDIDN 199
Query: 476 IKVIRKLGGTVEDTELVDGLVFTQKSANVNGPKRVEKAKIGLIQFCISPPKTDMDHKVVV 535
IK +K GG V DT+L+ G+V ++ + PKRVEKAKI LI + +T+ D ++ +
Sbjct: 200 IKFEKKEGGAVSDTKLIRGVVIDKEVVHPGMPKRVEKAKIALINDALEVKETETDAEIRI 259
Query: 536 SDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKIKVLVVK 595
+ + L++E + +V +IK+ G NV+ VQK I DLA H+L K +L V+
Sbjct: 260 TSPEQLQAFLEQEEKMLKEMVDKIKEVGANVVFVQKG-----IDDLAQHYLAKYGILAVR 314
Query: 596 DIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISGIQNPGRTLT 655
+++ D+E + K + + ++ PE L A+LVEE + + G +NP + +T
Sbjct: 315 RVKKSDMEKLAKATGAKIVTNIRDLTPEDLGEAELVEERKVAGENMIFVEGCKNP-KAVT 373
Query: 656 VVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYADTVSGID 715
+++RG + V+DE R+L DA+ VV+ +++ +IAGGGA EIELS+KL +Y
Sbjct: 374 ILIRGGTEHVVDEVERALEDAVKVVKDILEDGKIIAGGGAAEIELSIKLDEY-------- 425
Query: 716 AYCFRALIAGGGAPEIELSLKLTKYADTVSGIDAYCFRAFAQALEVIPLTLAENAGLNPI 775
A V G + AFA+AL+VIP TLAENAGL+PI
Sbjct: 426 -------------------------AKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPI 460
Query: 776 STVTELRNRHAQGETTTGINVRKGAITNILEENVVQPLLVSTSAITLSTETVRSILKIDD 835
T+ ++ H + T GI+V +G +++E V++P+ V AI ++E IL+IDD
Sbjct: 461 ETLVKVIAAHKEKGPTIGIDVYEGEPADMMERGVIEPVRVKKQAIKSASEAAIMILRIDD 520
Query: 836 IV 837
++
Sbjct: 521 VI 522
Score = 191 bits (484), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 101/275 (36%), Positives = 166/275 (60%), Gaps = 6/275 (2%)
Query: 85 DHKVVVSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKI 144
D ++ ++ + L++E + +V +IK+ G NV+ VQK I DLA H+L K
Sbjct: 254 DAEIRITSPEQLQAFLEQEEKMLKEMVDKIKEVGANVVFVQKGI-----DDLAQHYLAKY 308
Query: 145 KVLVVKDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISGIQN 204
+L V+ +++ D+E + K + + ++ PE L A+LVEE + + G +N
Sbjct: 309 GILAVRRVKKSDMEKLAKATGAKIVTNIRDLTPEDLGEAELVEERKVAGENMIFVEGCKN 368
Query: 205 PGRTLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYAD 264
P + +T+++RG + V+DE R+L DA+ VV+ +++ +IAGGGA EIELS+KL +YA
Sbjct: 369 P-KAVTILIRGGTEHVVDEVERALEDAVKVVKDILEDGKIIAGGGAAEIELSIKLDEYAK 427
Query: 265 TVSGIDAYCFRAFAQALEVIPLTLAENAGLNPISTVTELRNRHAQGETTTGINVRKGAIT 324
V G + AFA+AL+VIP TLAENAGL+PI T+ ++ H + T GI+V +G
Sbjct: 428 EVGGKEQLAIEAFAEALKVIPRTLAENAGLDPIETLVKVIAAHKEKGPTIGIDVYEGEPA 487
Query: 325 NILEENVVQPLLVSTSAITLSTETVRSILKIDDIL 359
+++E V++P+ V AI ++E IL+IDD++
Sbjct: 488 DMMERGVIEPVRVKKQAIKSASEAAIMILRIDDVI 522
Score = 79.7 bits (195), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 51/73 (69%)
Query: 25 DIRNSNIGAAKAVADAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMNVIHPAAKMM 84
D + NI AA+ +A+ +RT+LGP+GMDKM+ S G++ ITNDGATIL +M++ HPAAKMM
Sbjct: 23 DAQRMNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVITNDGATILDEMDIQHPAAKMM 82
Query: 85 DHKVVVSDYSAMD 97
D A D
Sbjct: 83 VEVAKTQDKEAGD 95
>sp|P46219|THSA_SULSH Thermosome subunit alpha OS=Sulfolobus shibatae GN=thsA PE=1 SV=1
Length = 560
Score = 292 bits (747), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 182/491 (37%), Positives = 279/491 (56%), Gaps = 50/491 (10%)
Query: 358 ILVELSKAQDIEAGDGTTSVVIVAGSLLEAAEKLLHKGIHPTTISDAFQKAAAKCVEILT 417
+LVE +KAQD E GDGTTS V++AG+LLE AE LL + IHPT I + ++KA K +E+L
Sbjct: 77 LLVEAAKAQDAEVGDGTTSAVVLAGALLEKAESLLDQNIHPTIIIEGYKKAYTKALELLP 136
Query: 418 EMSTPITLAD------RENLIKSAATSLNSKVVSQQASL--LAPIAVDAVLKVVN--PQR 467
++ T I + D R+ L K A T+L SK +++ A L + + +DA++ V P
Sbjct: 137 QLGTRIDIRDLNSSVARDTLRKIAFTTLASKFIAEGAELNKIIDMVIDAIVNVAEPLPNG 196
Query: 468 DTNVDLKDIKVIRKLGGTVEDTELVDGLVFTQKSANVNGPKRVEKAKIGLIQFCISPPKT 527
NV L IK+ +K GG++ED+ LV GLV ++ + P+RV KAKI ++ + K
Sbjct: 197 GYNVSLDLIKIDKKKGGSIEDSVLVKGLVLDKEVVHPGMPRRVTKAKIAVLDAALEVEKP 256
Query: 528 DMDHKVVVSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLD 587
++ K+ ++ + L EE Y+ ++V ++ G NV++ QK I D+A HFL
Sbjct: 257 EISAKISITSPEQIKAFLDEESKYLKDMVDKLASIGANVVICQK-----GIDDIAQHFLA 311
Query: 588 KIKVLVVKDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISGI 647
K +L V+ ++R DIE + K L R I+S+ P+ L A+LVEE GN + V I G
Sbjct: 312 KKGILAVRRVKRSDIEKLEKALGARIISSIKDATPDDLGYAELVEERRVGNDKMVFIEGA 371
Query: 648 QNPGRTLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKY 707
+N + + +++RGSN + LDEA RS++DAL +R ++ + ++ GGGA E+EL++KL +Y
Sbjct: 372 KNL-KAVNILLRGSNDMALDEAERSINDALHALRNILLEPVILPGGGAIELELAMKLREY 430
Query: 708 ADTVSGIDAYCFRALIAGGGAPEIELSLKLTKYADTVSGIDAYCFRAFAQALEVIPLTLA 767
A +V G + AFA ALE IP LA
Sbjct: 431 ---------------------------------ARSVGGKEQLAIEAFADALEEIPTILA 457
Query: 768 ENAGLNPISTVTELRNRHAQGETTTGINVRKGAIT-NILEENVVQPLLVSTSAITLSTET 826
E AGL IS + +LR RHA+G T TG++V G I ++ N+++P+ V + +TE
Sbjct: 458 ETAGLEAISALMDLRARHAKGLTNTGVDVIGGKIVDDVYALNIIEPIRVKAQVLKSATEA 517
Query: 827 VRSILKIDDIV 837
+ILKIDD++
Sbjct: 518 ATAILKIDDLI 528
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 108/274 (39%), Positives = 167/274 (60%), Gaps = 7/274 (2%)
Query: 87 KVVVSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKIKV 146
K+ ++ + L EE Y+ ++V ++ G NV++ QK I D+A HFL K +
Sbjct: 261 KISITSPEQIKAFLDEESKYLKDMVDKLASIGANVVICQK-----GIDDIAQHFLAKKGI 315
Query: 147 LVVKDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISGIQNPG 206
L V+ ++R DIE + K L R I+S+ P+ L A+LVEE GN + V I G +N
Sbjct: 316 LAVRRVKRSDIEKLEKALGARIISSIKDATPDDLGYAELVEERRVGNDKMVFIEGAKNL- 374
Query: 207 RTLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYADTV 266
+ + +++RGSN + LDEA RS++DAL +R ++ + ++ GGGA E+EL++KL +YA +V
Sbjct: 375 KAVNILLRGSNDMALDEAERSINDALHALRNILLEPVILPGGGAIELELAMKLREYARSV 434
Query: 267 SGIDAYCFRAFAQALEVIPLTLAENAGLNPISTVTELRNRHAQGETTTGINVRKGAIT-N 325
G + AFA ALE IP LAE AGL IS + +LR RHA+G T TG++V G I +
Sbjct: 435 GGKEQLAIEAFADALEEIPTILAETAGLEAISALMDLRARHAKGLTNTGVDVIGGKIVDD 494
Query: 326 ILEENVVQPLLVSTSAITLSTETVRSILKIDDIL 359
+ N+++P+ V + +TE +ILKIDD++
Sbjct: 495 VYALNIIEPIRVKAQVLKSATEAATAILKIDDLI 528
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 50/65 (76%)
Query: 20 KSKATDIRNSNIGAAKAVADAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMNVIHP 79
++ D +NI AAK +A+ +R+SLGP+G+DKM+ S G+VTITNDGATI+K M + HP
Sbjct: 14 RTTGRDALRNNILAAKTLAEMLRSSLGPKGLDKMLIDSFGDVTITNDGATIVKDMEIQHP 73
Query: 80 AAKMM 84
AAK++
Sbjct: 74 AAKLL 78
>sp|O57762|THS_PYRHO Thermosome subunit OS=Pyrococcus horikoshii (strain ATCC 700860 /
DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=ths PE=3
SV=1
Length = 549
Score = 290 bits (742), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 170/482 (35%), Positives = 275/482 (57%), Gaps = 42/482 (8%)
Query: 358 ILVELSKAQDIEAGDGTTSVVIVAGSLLEAAEKLLHKGIHPTTISDAFQKAAAKCVEILT 417
++VE++K QD EAGDGTT+ V++AG LL+ AE+LL + IHP+ I + A+ K EIL
Sbjct: 81 MMVEVAKTQDKEAGDGTTTAVVIAGELLKKAEELLDQNIHPSIIIKGYTLASQKAQEILD 140
Query: 418 EMSTPITLADRENLIKSAATSLNSKVVSQQASLLAPIAVDAVLKVVNPQRDT--NVDLKD 475
++ + D E L+K+A T++ K ++ LA +AV+AV K+V ++D VD+ +
Sbjct: 141 SIAKEVKPDDEEVLLKAAMTAITGKAAEEEREYLAKLAVEAV-KLVAEEKDGKLKVDIDN 199
Query: 476 IKVIRKLGGTVEDTELVDGLVFTQKSANVNGPKRVEKAKIGLIQFCISPPKTDMDHKVVV 535
IK+ +K GG V DT L+ G+V ++ + PKR+E AKI LI + +T+ D ++ +
Sbjct: 200 IKLEKKEGGAVRDTRLIRGVVIDKEVVHPGMPKRIENAKIALINDALEVKETETDAEIRI 259
Query: 536 SDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKIKVLVVK 595
+ + L++E + +V +IK+ G NV+ VQK I DLA H+L K +L V+
Sbjct: 260 TSPEQLQAFLEQEEKMLKEMVDKIKEVGANVVFVQKG-----IDDLAQHYLAKYGILAVR 314
Query: 596 DIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISGIQNPGRTLT 655
+++ D+E + K + + ++ PE L A+LVEE + + G +NP + +T
Sbjct: 315 RVKKSDMEKLAKATGAKIVTNIRDLTPEDLGEAELVEERKVAGENMIFVEGCKNP-KAVT 373
Query: 656 VVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYADTVSGID 715
+++RG + V+DE R+L DA+ VV+ +++ +IAGGGA EIELS+KL +Y
Sbjct: 374 ILIRGGTEHVVDEVERALEDAIKVVKDILEDGKIIAGGGASEIELSIKLDEY-------- 425
Query: 716 AYCFRALIAGGGAPEIELSLKLTKYADTVSGIDAYCFRAFAQALEVIPLTLAENAGLNPI 775
A V G + AFA+AL+VIP TLAENAGL+PI
Sbjct: 426 -------------------------AKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPI 460
Query: 776 STVTELRNRHAQGETTTGINVRKGAITNILEENVVQPLLVSTSAITLSTETVRSILKIDD 835
T+ ++ H + T GI+V +G +++E V++P+ V AI ++E IL+IDD
Sbjct: 461 ETLVKVIAAHKEKGQTIGIDVYEGEPADMMERGVIEPVRVKKQAIKSASEAAIMILRIDD 520
Query: 836 IV 837
++
Sbjct: 521 VI 522
Score = 191 bits (486), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 110/311 (35%), Positives = 181/311 (58%), Gaps = 17/311 (5%)
Query: 49 GMDKMIQASNGEVTITNDGATILKQMNVIHPAAKMMDHKVVVSDYSAMDRVLKEERAYIL 108
GM K I+ N ++ + ND A +K+ D ++ ++ + L++E +
Sbjct: 229 GMPKRIE--NAKIALIND-ALEVKETET--------DAEIRITSPEQLQAFLEQEEKMLK 277
Query: 109 NIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKIKVLVVKDIEREDIEFVCKTLNTRP 168
+V +IK+ G NV+ VQK I DLA H+L K +L V+ +++ D+E + K +
Sbjct: 278 EMVDKIKEVGANVVFVQKGI-----DDLAQHYLAKYGILAVRRVKKSDMEKLAKATGAKI 332
Query: 169 IASLDHFLPEHLSSADLVEEIPAGNSRFVKISGIQNPGRTLTVVVRGSNKLVLDEAARSL 228
+ ++ PE L A+LVEE + + G +NP + +T+++RG + V+DE R+L
Sbjct: 333 VTNIRDLTPEDLGEAELVEERKVAGENMIFVEGCKNP-KAVTILIRGGTEHVVDEVERAL 391
Query: 229 HDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYADTVSGIDAYCFRAFAQALEVIPLTL 288
DA+ VV+ +++ +IAGGGA EIELS+KL +YA V G + AFA+AL+VIP TL
Sbjct: 392 EDAIKVVKDILEDGKIIAGGGASEIELSIKLDEYAKEVGGKEQLAIEAFAEALKVIPRTL 451
Query: 289 AENAGLNPISTVTELRNRHAQGETTTGINVRKGAITNILEENVVQPLLVSTSAITLSTET 348
AENAGL+PI T+ ++ H + T GI+V +G +++E V++P+ V AI ++E
Sbjct: 452 AENAGLDPIETLVKVIAAHKEKGQTIGIDVYEGEPADMMERGVIEPVRVKKQAIKSASEA 511
Query: 349 VRSILKIDDIL 359
IL+IDD++
Sbjct: 512 AIMILRIDDVI 522
Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 51/73 (69%)
Query: 25 DIRNSNIGAAKAVADAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMNVIHPAAKMM 84
D + NI AA+ +A+ +RT+LGP+GMDKM+ S G++ ITNDGATIL +M++ HPAAKMM
Sbjct: 23 DAQRMNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVITNDGATILDEMDIQHPAAKMM 82
Query: 85 DHKVVVSDYSAMD 97
D A D
Sbjct: 83 VEVAKTQDKEAGD 95
>sp|Q9V2T5|THSA_SULAC Thermosome subunit alpha OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=thsA PE=3 SV=2
Length = 558
Score = 290 bits (742), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 181/492 (36%), Positives = 278/492 (56%), Gaps = 51/492 (10%)
Query: 358 ILVELSKAQDIEAGDGTTSVVIVAGSLLEAAEKLLHKGIHPTTISDAFQKAAAKCVEILT 417
+LVE +KAQD E GDGTTS V++AG LL+ AE+LL + +HPT I D ++KA K +EI+
Sbjct: 77 LLVEAAKAQDAEVGDGTTSAVVLAGLLLDKAEELLEQNVHPTIIIDGYKKALTKALEIID 136
Query: 418 EMSTPITLAD------RENLIKSAATSLNSKVVSQQASLLAPI---AVDAVLKVVN--PQ 466
++S I + D + L K +T+++SK ++ A + I +DA+ V P
Sbjct: 137 QLSLKIDVNDLSSPTAKAQLKKIVSTTMSSKFIAGGAEEIDKIIDLVIDAITIVAEKRPD 196
Query: 467 RDTNVDLKDIKVIRKLGGTVEDTELVDGLVFTQKSANVNGPKRVEKAKIGLIQFCISPPK 526
NV L IK+ +K GG++ED+ LV GLV ++ + P+RVEKAKI ++ + K
Sbjct: 197 GTYNVPLDLIKIDKKKGGSIEDSILVHGLVLDKEVVHAGMPRRVEKAKIAVLDAALEVEK 256
Query: 527 TDMDHKVVVSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFL 586
++ K+ ++ + L EE Y+ +V ++ G NV++ QK I D+A HFL
Sbjct: 257 PEISAKISITSPEQIKSFLDEEARYLKEMVDKLASIGANVVICQK-----GIDDVAQHFL 311
Query: 587 DKIKVLVVKDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISG 646
K +L V+ ++R DIE + K L R I+S+ PE L A+LVEE GN + V I G
Sbjct: 312 AKKGILAVRRVKRSDIEKLEKALGARIISSIKDATPEDLGYAELVEERRIGNDKMVFIEG 371
Query: 647 IQNPGRTLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTK 706
+NP R + +++RGSN + LDEA RSL+DAL +R ++ + ++AGGGA E EL+L+L +
Sbjct: 372 AKNP-RAVNILLRGSNDMALDEAERSLNDALHSLRNVLMKPMIVAGGGAVESELALRLRE 430
Query: 707 YADTVSGIDAYCFRALIAGGGAPEIELSLKLTKYADTVSGIDAYCFRAFAQALEVIPLTL 766
Y A +V G + FA+ALE IP+ L
Sbjct: 431 Y---------------------------------ARSVGGKEQLAIEKFAEALEEIPMIL 457
Query: 767 AENAGLNPISTVTELRNRHAQGETTTGINVRKGAIT-NILEENVVQPLLVSTSAITLSTE 825
AE AG+ PI + +LR RHA+G +GI+ G I ++++ NV++P+ V + + + E
Sbjct: 458 AETAGMEPIQALMDLRARHAKGLVNSGIDAVNGKIADDMMKINVIEPVRVKSQVLKSAVE 517
Query: 826 TVRSILKIDDIV 837
+ILKIDD+V
Sbjct: 518 AATAILKIDDLV 529
Score = 197 bits (500), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 109/274 (39%), Positives = 168/274 (61%), Gaps = 7/274 (2%)
Query: 87 KVVVSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKIKV 146
K+ ++ + L EE Y+ +V ++ G NV++ QK I D+A HFL K +
Sbjct: 262 KISITSPEQIKSFLDEEARYLKEMVDKLASIGANVVICQK-----GIDDVAQHFLAKKGI 316
Query: 147 LVVKDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISGIQNPG 206
L V+ ++R DIE + K L R I+S+ PE L A+LVEE GN + V I G +NP
Sbjct: 317 LAVRRVKRSDIEKLEKALGARIISSIKDATPEDLGYAELVEERRIGNDKMVFIEGAKNP- 375
Query: 207 RTLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYADTV 266
R + +++RGSN + LDEA RSL+DAL +R ++ + ++AGGGA E EL+L+L +YA +V
Sbjct: 376 RAVNILLRGSNDMALDEAERSLNDALHSLRNVLMKPMIVAGGGAVESELALRLREYARSV 435
Query: 267 SGIDAYCFRAFAQALEVIPLTLAENAGLNPISTVTELRNRHAQGETTTGINVRKGAIT-N 325
G + FA+ALE IP+ LAE AG+ PI + +LR RHA+G +GI+ G I +
Sbjct: 436 GGKEQLAIEKFAEALEEIPMILAETAGMEPIQALMDLRARHAKGLVNSGIDAVNGKIADD 495
Query: 326 ILEENVVQPLLVSTSAITLSTETVRSILKIDDIL 359
+++ NV++P+ V + + + E +ILKIDD++
Sbjct: 496 MMKINVIEPVRVKSQVLKSAVEAATAILKIDDLV 529
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 53/71 (74%), Gaps = 3/71 (4%)
Query: 17 FKD---KSKATDIRNSNIGAAKAVADAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQ 73
FK+ +S D +NI AA +A+ +++SLGPRG+DKM+ S G+VTITNDGATI+K+
Sbjct: 8 FKEGTSRSSGRDALRNNILAAVTLAEMLKSSLGPRGLDKMLIDSFGDVTITNDGATIVKE 67
Query: 74 MNVIHPAAKMM 84
M + HPAAK++
Sbjct: 68 MEIQHPAAKLL 78
>sp|Q8SSH3|TCPD_ENCCU T-complex protein 1 subunit delta OS=Encephalitozoon cuniculi
(strain GB-M1) GN=CCT4 PE=1 SV=1
Length = 484
Score = 288 bits (736), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 172/485 (35%), Positives = 279/485 (57%), Gaps = 67/485 (13%)
Query: 355 IDDILVELSKAQDIEAGDGTTSVVIVAGSLLEAAEKLLHKGIHPTTISDAFQKAAAKCVE 414
I IL +S QD E GDGTTSVVI+AG LLE+ LL + +HP+ I D + A +
Sbjct: 61 IHGILSSMSATQDEECGDGTTSVVILAGCLLESISSLLERNVHPSVICDNLEIAKKIGLR 120
Query: 415 ILTEMSTPITLADRENLIKSAATSLNSKVVSQQASLLAPIAVDAVLKVVNPQRDTNVDLK 474
+ + + ++LI + T+L SK+ S + AV+A+ N D K
Sbjct: 121 YIDRVKMECS---EKDLISNVTTALCSKIASSTGEM----AVEAI----RGMEYVNGDKK 169
Query: 475 DIKVIRKLGGTVEDTELVDGLVFTQKSANVNGPKRVEKAKIGLIQFCISPPKTDMDHKVV 534
+I+V++K+GG ++D + ++ ++ PK KAK+G+IQFC+S PKT+MD K++
Sbjct: 170 NIRVVKKIGGNLDDVKAYKSILLECDLKDI--PK---KAKVGVIQFCLSAPKTNMDSKIL 224
Query: 535 VSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKIKVLVV 594
++D + M++++++ER YIL + K+IKK+GC +L+VQKSILR+++SDLA HFL ++ +LVV
Sbjct: 225 INDPALMEKIIQDERKYILEMCKKIKKSGCTLLVVQKSILRESLSDLASHFLKQLNILVV 284
Query: 595 KDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISG-IQNPGRT 653
++R+D++++C +N +P++ +D P L + E + G ++ G
Sbjct: 285 NSVDRKDVDYICSAMNIQPVSEVDLLSPASLVDVETGE-----------VEGMLEIKGYG 333
Query: 654 LTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYADTVSG 713
T+++RG + +V++EA RSL+DALCVV+CL + L+ GGG+ E+ ++L L++ +
Sbjct: 334 CTILLRGCDDMVVEEAERSLNDALCVVKCLKELPFLVPGGGSIEMGIALMLSESTEG--- 390
Query: 714 IDAYCFRALIAGGGAPEIELSLKLTKYADTVSGIDAYCFRAFAQALEVIPLTLAENAGLN 773
+ Y R A+A E +P LA NAGL
Sbjct: 391 ----------------------------------NIYVLREIAKAFEGVPYFLARNAGLY 416
Query: 774 PISTVTELRNRHAQGETTTGINVRKGAITNIL-EENVVQPLLVSTSAITLSTETVRSILK 832
P+ V+ELR+ Q GI+VR G +++ +++VVQP VS S +TL+ ETV ILK
Sbjct: 417 PVEIVSELRSELKQN-CCAGISVRSGHAGDMVRDDSVVQPAKVSISVVTLALETVSMILK 475
Query: 833 IDDIV 837
IDDI+
Sbjct: 476 IDDIL 480
Score = 212 bits (540), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 112/278 (40%), Positives = 183/278 (65%), Gaps = 18/278 (6%)
Query: 84 MDHKVVVSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDK 143
MD K++++D + M++++++ER YIL + K+IKK+GC +L+VQKSILR+++SDLA HFL +
Sbjct: 219 MDSKILINDPALMEKIIQDERKYILEMCKKIKKSGCTLLVVQKSILRESLSDLASHFLKQ 278
Query: 144 IKVLVVKDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISG-I 202
+ +LVV ++R+D++++C +N +P++ +D P L + E + G +
Sbjct: 279 LNILVVNSVDRKDVDYICSAMNIQPVSEVDLLSPASLVDVETGE-----------VEGML 327
Query: 203 QNPGRTLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKY 262
+ G T+++RG + +V++EA RSL+DALCVV+CL + L+ GGG+ E+ ++L L++
Sbjct: 328 EIKGYGCTILLRGCDDMVVEEAERSLNDALCVVKCLKELPFLVPGGGSIEMGIALMLSES 387
Query: 263 ADTVSGIDAYCFRAFAQALEVIPLTLAENAGLNPISTVTELRNRHAQGETTTGINVRKGA 322
+ + Y R A+A E +P LA NAGL P+ V+ELR+ Q GI+VR G
Sbjct: 388 TEG----NIYVLREIAKAFEGVPYFLARNAGLYPVEIVSELRSELKQN-CCAGISVRSGH 442
Query: 323 ITNIL-EENVVQPLLVSTSAITLSTETVRSILKIDDIL 359
+++ +++VVQP VS S +TL+ ETV ILKIDDIL
Sbjct: 443 AGDMVRDDSVVQPAKVSISVVTLALETVSMILKIDDIL 480
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
Query: 26 IRNSNIGAAKAVADAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMNVIHP 79
+R S A++++ + TSLGPRG+DKM+ + + +TNDGATILK +N HP
Sbjct: 9 VRTSVFQASQSLLQTLSTSLGPRGLDKMV-VKDKKTVVTNDGATILKYLNH-HP 60
>sp|P47209|TCPE_CAEEL T-complex protein 1 subunit epsilon OS=Caenorhabditis elegans
GN=cct-5 PE=1 SV=1
Length = 542
Score = 286 bits (733), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 171/482 (35%), Positives = 269/482 (55%), Gaps = 43/482 (8%)
Query: 358 ILVELSKAQDIEAGDGTTSVVIVAGSLLEAAEKLLHKGIHPTTISDAFQKAAAKCVEILT 417
++VELSK+QD E GDGTT VV++AG+LLE AEKL+ +GIHP I+D F A K +E L
Sbjct: 91 LMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETLD 150
Query: 418 EMSTPITLADRENLIKSAATSLNSKVVSQQASLLAPIAVDAVLKVVNPQ-RDTNVDLKDI 476
+S + +RE L+++A TSL SK+V++ A IAVDAVL V + + +D N ++ I
Sbjct: 151 SISDKFPVENRERLVETAQTSLGSKIVNRSLRQFAEIAVDAVLSVADIESKDVNFEM--I 208
Query: 477 KVIRKLGGTVEDTELVDGLVFTQKSANVNGPKRVEKAKIGLIQFCISPPKTDMDHKVVVS 536
K+ K+GG +EDT LV G+V + ++ PK ++ AK+ ++ PPK HK+ ++
Sbjct: 209 KMEGKVGGRLEDTILVKGIVIDKTMSHPQMPKELKNAKVAILTCPFEPPKPKTKHKLDIT 268
Query: 537 DYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKIKVLVVKD 596
+ ER +++Q+K++G + + Q D A H L + V+
Sbjct: 269 STEDFKALRDYERETFETMIRQVKESGATLAICQW-----GFDDEANHLLQANDLPAVRW 323
Query: 597 IEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISGIQNP-GRTLT 655
+ +IE + N R + E L +A LV EI G ++ +S Q P + +T
Sbjct: 324 VGGPEIELLAIATNARIVPRFSELSKEKLGTAGLVREITFGAAKDRMLSIEQCPNNKAVT 383
Query: 656 VVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYADTVSGID 715
+ VRG NK+++DEA R+LHDALCV+R LV+ ++ GGG+ E+ ++++ K AD + GI+
Sbjct: 384 IFVRGGNKMIIDEAKRALHDALCVIRNLVRDSRIVYGGGSAELAAAIQVAKEADRIDGIE 443
Query: 716 AYCFRALIAGGGAPEIELSLKLTKYADTVSGIDAYCFRAFAQALEVIPLTLAENAGLNPI 775
Y FRAFA ALE IP+ LAEN+GL PI
Sbjct: 444 QY---------------------------------AFRAFADALESIPMALAENSGLAPI 470
Query: 776 STVTELRNRHAQ-GETTTGINVRKGAITNILEENVVQPLLVSTSAITLSTETVRSILKID 834
+++L+ + + G+++ GI+ ++ E+ V++ LL I+L+T+ VR ILKID
Sbjct: 471 DALSDLKAKQIETGKSSLGIDAVFAGTNDMKEQKVIETLLSKREQISLATQVVRMILKID 530
Query: 835 DI 836
D+
Sbjct: 531 DV 532
Score = 173 bits (438), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 97/286 (33%), Positives = 159/286 (55%), Gaps = 7/286 (2%)
Query: 77 IHPAAKMMDHKVVVSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDL 136
P HK+ ++ + ER +++Q+K++G + + Q D
Sbjct: 254 FEPPKPKTKHKLDITSTEDFKALRDYERETFETMIRQVKESGATLAICQW-----GFDDE 308
Query: 137 AIHFLDKIKVLVVKDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRF 196
A H L + V+ + +IE + N R + E L +A LV EI G ++
Sbjct: 309 ANHLLQANDLPAVRWVGGPEIELLAIATNARIVPRFSELSKEKLGTAGLVREITFGAAKD 368
Query: 197 VKISGIQNPG-RTLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIEL 255
+S Q P + +T+ VRG NK+++DEA R+LHDALCV+R LV+ ++ GGG+ E+
Sbjct: 369 RMLSIEQCPNNKAVTIFVRGGNKMIIDEAKRALHDALCVIRNLVRDSRIVYGGGSAELAA 428
Query: 256 SLKLTKYADTVSGIDAYCFRAFAQALEVIPLTLAENAGLNPISTVTELRNRHAQ-GETTT 314
++++ K AD + GI+ Y FRAFA ALE IP+ LAEN+GL PI +++L+ + + G+++
Sbjct: 429 AIQVAKEADRIDGIEQYAFRAFADALESIPMALAENSGLAPIDALSDLKAKQIETGKSSL 488
Query: 315 GINVRKGAITNILEENVVQPLLVSTSAITLSTETVRSILKIDDILV 360
GI+ ++ E+ V++ LL I+L+T+ VR ILKIDD+ V
Sbjct: 489 GIDAVFAGTNDMKEQKVIETLLSKREQISLATQVVRMILKIDDVRV 534
Score = 77.0 bits (188), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 53/67 (79%), Gaps = 7/67 (10%)
Query: 29 SNIGAAKAVADAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMNVIHPAAKMM---- 84
S+I AA+AVA+ +RTSLGPRG+DKM+ + +G+VTITNDGATI+++M+V H AK+M
Sbjct: 37 SHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLMVELS 96
Query: 85 ---DHKV 88
DH++
Sbjct: 97 KSQDHEI 103
>sp|Q4R6V2|TCPE_MACFA T-complex protein 1 subunit epsilon OS=Macaca fascicularis GN=CCT5
PE=2 SV=1
Length = 541
Score = 286 bits (732), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 183/507 (36%), Positives = 285/507 (56%), Gaps = 55/507 (10%)
Query: 342 ITLSTETVRSILKIDD----ILVELSKAQDIEAGDGTTSVVIVAGSLLEAAEKLLHKGIH 397
+T T+ S++ +D ++VELSK+QD E GDGTT VV++AG+LLE AE+LL +GIH
Sbjct: 70 VTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIH 129
Query: 398 PTTISDAFQKAAAKCVEILTEMSTP--ITLADRENLIKSAATSLNSKVVSQQASLLAPIA 455
P I+D +++AA +E L ++S + + D E LI++A T+L SKVV+ +A IA
Sbjct: 130 PIRIADGYEQAARVAIEHLDKISDSVLVDIKDTEPLIQTAKTTLGSKVVNSCHRQMAEIA 189
Query: 456 VDAVLKVVNPQRDTNVDLKDIKVIRKLGGTVEDTELVDGLVFTQKSANVNGPKRVEKAKI 515
V+AVL V + +R +VD + IKV K+GG +EDT+L+ G++ + ++ PK+VE AKI
Sbjct: 190 VNAVLTVADMER-RDVDFELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPQMPKKVEDAKI 248
Query: 516 GLIQFCISPPKTDMDHKV---VVSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKS 572
++ PPK HK+ V DY A+ + KE+ +++QIK+ G N+ + Q
Sbjct: 249 AILTCPFEPPKPKTKHKLDVTSVEDYKALQKYEKEK---FEEMIQQIKETGANLAICQW- 304
Query: 573 ILRDAISDLAIHFLDKIKVLVVKDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVE 632
D A H L + + V+ + +IE + R + E L A LV+
Sbjct: 305 ----GFDDEANHLLLQNNLPAVRWVGGPEIELIAIATGGRIVPRFSELTAEKLGFAGLVQ 360
Query: 633 EIPAGNS--RFVKISGIQNPGRTLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALI 690
EI G + + + I +N R +T+ +RG NK++++EA RSLHDALCV+R L++ ++
Sbjct: 361 EISFGTTKDKMLVIEQCKN-SRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVV 419
Query: 691 AGGGAPEIELSLKLTKYADTVSGIDAYCFRALIAGGGAPEIELSLKLTKYADTVSGIDAY 750
GGGA EI +L +++ AD P +E Y
Sbjct: 420 YGGGAAEISCALAVSQEADK-----------------CPTLE----------------QY 446
Query: 751 CFRAFAQALEVIPLTLAENAGLNPISTVTELRNRHA-QGETTTGINVRKGAITNILEENV 809
RAFA ALEVIP+ L+EN+G+NPI T+TE+R R + GI+ ++ +++V
Sbjct: 447 AMRAFADALEVIPMALSENSGMNPIQTMTEVRARQVKEMNPALGIDCLHKGTNDMKQQHV 506
Query: 810 VQPLLVSTSAITLSTETVRSILKIDDI 836
++ L+ I+L+T+ VR ILKIDDI
Sbjct: 507 IETLIGKKQQISLATQMVRMILKIDDI 533
Score = 169 bits (428), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 97/272 (35%), Positives = 155/272 (56%), Gaps = 12/272 (4%)
Query: 90 VSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKIKVLVV 149
V DY A+ + KE+ +++QIK+ G N+ + Q D A H L + + V
Sbjct: 271 VEDYKALQKYEKEK---FEEMIQQIKETGANLAICQW-----GFDDEANHLLLQNNLPAV 322
Query: 150 KDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNS--RFVKISGIQNPGR 207
+ + +IE + R + E L A LV+EI G + + + I +N R
Sbjct: 323 RWVGGPEIELIAIATGGRIVPRFSELTAEKLGFAGLVQEISFGTTKDKMLVIEQCKN-SR 381
Query: 208 TLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYADTVS 267
+T+ +RG NK++++EA RSLHDALCV+R L++ ++ GGGA EI +L +++ AD
Sbjct: 382 AVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKCP 441
Query: 268 GIDAYCFRAFAQALEVIPLTLAENAGLNPISTVTELRNRHA-QGETTTGINVRKGAITNI 326
++ Y RAFA ALEVIP+ L+EN+G+NPI T+TE+R R + GI+ ++
Sbjct: 442 TLEQYAMRAFADALEVIPMALSENSGMNPIQTMTEVRARQVKEMNPALGIDCLHKGTNDM 501
Query: 327 LEENVVQPLLVSTSAITLSTETVRSILKIDDI 358
+++V++ L+ I+L+T+ VR ILKIDDI
Sbjct: 502 KQQHVIETLIGKKQQISLATQMVRMILKIDDI 533
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 45/56 (80%)
Query: 29 SNIGAAKAVADAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMNVIHPAAKMM 84
S+I AAKAVA+ +RTSLGP G+DKM+ +G+VT+TNDGATIL M+V H AK+M
Sbjct: 36 SHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLM 91
>sp|P48643|TCPE_HUMAN T-complex protein 1 subunit epsilon OS=Homo sapiens GN=CCT5 PE=1
SV=1
Length = 541
Score = 286 bits (732), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 183/507 (36%), Positives = 285/507 (56%), Gaps = 55/507 (10%)
Query: 342 ITLSTETVRSILKIDD----ILVELSKAQDIEAGDGTTSVVIVAGSLLEAAEKLLHKGIH 397
+T T+ S++ +D ++VELSK+QD E GDGTT VV++AG+LLE AE+LL +GIH
Sbjct: 70 VTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIH 129
Query: 398 PTTISDAFQKAAAKCVEILTEMSTP--ITLADRENLIKSAATSLNSKVVSQQASLLAPIA 455
P I+D +++AA +E L ++S + + D E LI++A T+L SKVV+ +A IA
Sbjct: 130 PIRIADGYEQAARVAIEHLDKISDSVLVDIKDTEPLIQTAKTTLGSKVVNSCHRQMAEIA 189
Query: 456 VDAVLKVVNPQRDTNVDLKDIKVIRKLGGTVEDTELVDGLVFTQKSANVNGPKRVEKAKI 515
V+AVL V + +R +VD + IKV K+GG +EDT+L+ G++ + ++ PK+VE AKI
Sbjct: 190 VNAVLTVADMER-RDVDFELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPQMPKKVEDAKI 248
Query: 516 GLIQFCISPPKTDMDHKV---VVSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKS 572
++ PPK HK+ V DY A+ + KE+ +++QIK+ G N+ + Q
Sbjct: 249 AILTCPFEPPKPKTKHKLDVTSVEDYKALQKYEKEK---FEEMIQQIKETGANLAICQW- 304
Query: 573 ILRDAISDLAIHFLDKIKVLVVKDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVE 632
D A H L + + V+ + +IE + R + E L A LV+
Sbjct: 305 ----GFDDEANHLLLQNNLPAVRWVGGPEIELIAIATGGRIVPRFSELTAEKLGFAGLVQ 360
Query: 633 EIPAGNS--RFVKISGIQNPGRTLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALI 690
EI G + + + I +N R +T+ +RG NK++++EA RSLHDALCV+R L++ ++
Sbjct: 361 EISFGTTKDKMLVIEQCKN-SRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVV 419
Query: 691 AGGGAPEIELSLKLTKYADTVSGIDAYCFRALIAGGGAPEIELSLKLTKYADTVSGIDAY 750
GGGA EI +L +++ AD P +E Y
Sbjct: 420 YGGGAAEISCALAVSQEADK-----------------CPTLE----------------QY 446
Query: 751 CFRAFAQALEVIPLTLAENAGLNPISTVTELRNRHA-QGETTTGINVRKGAITNILEENV 809
RAFA ALEVIP+ L+EN+G+NPI T+TE+R R + GI+ ++ +++V
Sbjct: 447 AMRAFADALEVIPMALSENSGMNPIQTMTEVRARQVKEMNPALGIDCLHKGTNDMKQQHV 506
Query: 810 VQPLLVSTSAITLSTETVRSILKIDDI 836
++ L+ I+L+T+ VR ILKIDDI
Sbjct: 507 IETLIGKKQQISLATQMVRMILKIDDI 533
Score = 169 bits (428), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 97/272 (35%), Positives = 155/272 (56%), Gaps = 12/272 (4%)
Query: 90 VSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKIKVLVV 149
V DY A+ + KE+ +++QIK+ G N+ + Q D A H L + + V
Sbjct: 271 VEDYKALQKYEKEK---FEEMIQQIKETGANLAICQW-----GFDDEANHLLLQNNLPAV 322
Query: 150 KDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNS--RFVKISGIQNPGR 207
+ + +IE + R + E L A LV+EI G + + + I +N R
Sbjct: 323 RWVGGPEIELIAIATGGRIVPRFSELTAEKLGFAGLVQEISFGTTKDKMLVIEQCKN-SR 381
Query: 208 TLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYADTVS 267
+T+ +RG NK++++EA RSLHDALCV+R L++ ++ GGGA EI +L +++ AD
Sbjct: 382 AVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKCP 441
Query: 268 GIDAYCFRAFAQALEVIPLTLAENAGLNPISTVTELRNRHA-QGETTTGINVRKGAITNI 326
++ Y RAFA ALEVIP+ L+EN+G+NPI T+TE+R R + GI+ ++
Sbjct: 442 TLEQYAMRAFADALEVIPMALSENSGMNPIQTMTEVRARQVKEMNPALGIDCLHKGTNDM 501
Query: 327 LEENVVQPLLVSTSAITLSTETVRSILKIDDI 358
+++V++ L+ I+L+T+ VR ILKIDDI
Sbjct: 502 KQQHVIETLIGKKQQISLATQMVRMILKIDDI 533
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 45/56 (80%)
Query: 29 SNIGAAKAVADAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMNVIHPAAKMM 84
S+I AAKAVA+ +RTSLGP G+DKM+ +G+VT+TNDGATIL M+V H AK+M
Sbjct: 36 SHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLM 91
>sp|Q9YDK6|THSA_AERPE Thermosome subunit alpha OS=Aeropyrum pernix (strain ATCC 700893 /
DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=thsA PE=3
SV=2
Length = 554
Score = 285 bits (730), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 174/485 (35%), Positives = 282/485 (58%), Gaps = 44/485 (9%)
Query: 358 ILVELSKAQDIEAGDGTTSVVIVAGSLLEAAEKLLHKGIHPTTISDAFQKAAAKCVEILT 417
+LVE++KAQD E GDGTTSVV++AG+LLE AEKLL + +HPT I + + KA + + ++
Sbjct: 80 LLVEVAKAQDAEVGDGTTSVVVLAGALLEKAEKLLDENLHPTIIIEGYTKAMEEALRLVD 139
Query: 418 EMSTPITLADRENLIKSAATSLNSKVVSQ--QASLLAPIAVDAVLKVVN--PQRDTNVDL 473
E + P+ + D L + A T+L SK V + + + +DA+ V P VDL
Sbjct: 140 EAAVPVEVEDDSVLRRIAETTLASKFVGTGPERDKIISMVIDAIRTVAEKRPDGGYEVDL 199
Query: 474 KDIKVIRKLGGTVEDTELVDGLVFTQKSANVNGPKRVEKAKIGLIQFCISPPKTDMDHKV 533
+K+ +K GG++ D++LV G+V ++ + PKRVE AKI ++ + K ++ K+
Sbjct: 200 DYVKIEKKKGGSLLDSKLVRGIVLDKEVVHPAMPKRVENAKILVLDAPLEVQKPELTTKI 259
Query: 534 VVSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKIKVLV 593
V+D ++ L+EE + ++V++I G NV++ QK I ++A HFL K +L
Sbjct: 260 RVTDIEKLESFLEEETRMLRDMVEKIAATGANVVITQK-----GIDEVAQHFLAKKGILA 314
Query: 594 VKDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISGIQNPGRT 653
V+ ++R DIE V K + + SL PE+L A+LVEE G + V I G +NP ++
Sbjct: 315 VRRVKRSDIEKVAKATGAKIVTSLRDLKPEYLGYAELVEERKVGEDKMVFIEGAKNP-KS 373
Query: 654 LTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYADTVSG 713
+T+++RG+N ++LDEA R++ DAL +R ++++ ++ GGGA E+EL+LKL ++A TV
Sbjct: 374 VTILLRGANDMLLDEAERNIKDALHGLRNILREPKIVGGGGAVEVELALKLKEFARTV-- 431
Query: 714 IDAYCFRALIAGGGAPEIELSLKLTKYADTVSGIDAYCFRAFAQALEVIPLTLAENAGLN 773
GG ++ A+A+ALE IP LAE+AG++
Sbjct: 432 ------------GGKQQL-------------------AIEAYAEALETIPTVLAESAGMD 460
Query: 774 PISTVTELRNRHAQGETTTGINVRKGAITNILEE-NVVQPLLVSTSAITLSTETVRSILK 832
+ + +LR+ H+QG G+NV +G I + + NV +P+LV I ++E SILK
Sbjct: 461 ALEALLKLRSLHSQGYKFAGVNVLEGKIEEDMTKINVYEPVLVKKQVIKSASEAAISILK 520
Query: 833 IDDIV 837
IDD++
Sbjct: 521 IDDVI 525
Score = 196 bits (498), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 106/274 (38%), Positives = 172/274 (62%), Gaps = 7/274 (2%)
Query: 87 KVVVSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKIKV 146
K+ V+D ++ L+EE + ++V++I G NV++ QK I ++A HFL K +
Sbjct: 258 KIRVTDIEKLESFLEEETRMLRDMVEKIAATGANVVITQK-----GIDEVAQHFLAKKGI 312
Query: 147 LVVKDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISGIQNPG 206
L V+ ++R DIE V K + + SL PE+L A+LVEE G + V I G +NP
Sbjct: 313 LAVRRVKRSDIEKVAKATGAKIVTSLRDLKPEYLGYAELVEERKVGEDKMVFIEGAKNP- 371
Query: 207 RTLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYADTV 266
+++T+++RG+N ++LDEA R++ DAL +R ++++ ++ GGGA E+EL+LKL ++A TV
Sbjct: 372 KSVTILLRGANDMLLDEAERNIKDALHGLRNILREPKIVGGGGAVEVELALKLKEFARTV 431
Query: 267 SGIDAYCFRAFAQALEVIPLTLAENAGLNPISTVTELRNRHAQGETTTGINVRKGAITNI 326
G A+A+ALE IP LAE+AG++ + + +LR+ H+QG G+NV +G I
Sbjct: 432 GGKQQLAIEAYAEALETIPTVLAESAGMDALEALLKLRSLHSQGYKFAGVNVLEGKIEED 491
Query: 327 LEE-NVVQPLLVSTSAITLSTETVRSILKIDDIL 359
+ + NV +P+LV I ++E SILKIDD++
Sbjct: 492 MTKINVYEPVLVKKQVIKSASEAAISILKIDDVI 525
Score = 73.6 bits (179), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 48/57 (84%)
Query: 28 NSNIGAAKAVADAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMNVIHPAAKMM 84
+NI AA+ +A+ +++SLGPRG+DKM+ + G++T+TNDGATI+K+M + HPAAK++
Sbjct: 25 RANILAARVLAEMLKSSLGPRGLDKMLVDAFGDITVTNDGATIVKEMEIQHPAAKLL 81
>sp|Q5RF02|TCPE_PONAB T-complex protein 1 subunit epsilon OS=Pongo abelii GN=CCT5 PE=2
SV=1
Length = 541
Score = 284 bits (727), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 182/507 (35%), Positives = 284/507 (56%), Gaps = 55/507 (10%)
Query: 342 ITLSTETVRSILKIDD----ILVELSKAQDIEAGDGTTSVVIVAGSLLEAAEKLLHKGIH 397
+T T+ S++ +D ++VELSK+QD E GDGTT VV++AG+LLE AE+LL +GIH
Sbjct: 70 VTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIH 129
Query: 398 PTTISDAFQKAAAKCVEILTEMSTP--ITLADRENLIKSAATSLNSKVVSQQASLLAPIA 455
P I+D +++AA +E L ++S + + D E LI++A T+L SKVV+ +A IA
Sbjct: 130 PIRIADGYEQAARVAIEHLDKISDSVLVDIKDTEPLIQTAKTTLGSKVVNSCHRQMAEIA 189
Query: 456 VDAVLKVVNPQRDTNVDLKDIKVIRKLGGTVEDTELVDGLVFTQKSANVNGPKRVEKAKI 515
V+AVL V + +R +VD + IKV K+GG +EDT+L+ G++ + ++ PK+VE AKI
Sbjct: 190 VNAVLTVADMER-RDVDFELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPRMPKKVEDAKI 248
Query: 516 GLIQFCISPPKTDMDHKV---VVSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKS 572
++ PPK HK+ V DY A+ + KE+ +++QIK+ G N+ + Q
Sbjct: 249 AILTCPFEPPKPKTKHKLDVTSVEDYKALQKYEKEK---FEEMIQQIKETGANLAICQW- 304
Query: 573 ILRDAISDLAIHFLDKIKVLVVKDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVE 632
D A H L + + V+ + +IE + R + E L A LV+
Sbjct: 305 ----GFDDEANHLLLQNNLPAVRWVGGPEIELIAIATGGRIVPRFSELTAEKLGFAGLVQ 360
Query: 633 EIPAGNS--RFVKISGIQNPGRTLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALI 690
EI G + + + I +N R +T+ +RG NK++++EA RSLHDALCV+R L++ ++
Sbjct: 361 EISFGTTKDKMLVIEQCKN-SRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVV 419
Query: 691 AGGGAPEIELSLKLTKYADTVSGIDAYCFRALIAGGGAPEIELSLKLTKYADTVSGIDAY 750
GGGA E +L +++ AD P +E Y
Sbjct: 420 YGGGAAETSCALAVSQEADK-----------------CPTLE----------------QY 446
Query: 751 CFRAFAQALEVIPLTLAENAGLNPISTVTELRNRHA-QGETTTGINVRKGAITNILEENV 809
RAFA ALEVIP+ L+EN+G+NPI T+TE+R R + GI+ ++ +++V
Sbjct: 447 AMRAFADALEVIPMALSENSGMNPIQTMTEVRARQVKEMNPALGIDCLHKGTNDMKQQHV 506
Query: 810 VQPLLVSTSAITLSTETVRSILKIDDI 836
++ L+ I+L+T+ VR ILKIDDI
Sbjct: 507 IETLIGKKQQISLATQMVRMILKIDDI 533
Score = 167 bits (423), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/272 (35%), Positives = 154/272 (56%), Gaps = 12/272 (4%)
Query: 90 VSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKIKVLVV 149
V DY A+ + KE+ +++QIK+ G N+ + Q D A H L + + V
Sbjct: 271 VEDYKALQKYEKEK---FEEMIQQIKETGANLAICQW-----GFDDEANHLLLQNNLPAV 322
Query: 150 KDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNS--RFVKISGIQNPGR 207
+ + +IE + R + E L A LV+EI G + + + I +N R
Sbjct: 323 RWVGGPEIELIAIATGGRIVPRFSELTAEKLGFAGLVQEISFGTTKDKMLVIEQCKN-SR 381
Query: 208 TLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYADTVS 267
+T+ +RG NK++++EA RSLHDALCV+R L++ ++ GGGA E +L +++ AD
Sbjct: 382 AVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAETSCALAVSQEADKCP 441
Query: 268 GIDAYCFRAFAQALEVIPLTLAENAGLNPISTVTELRNRHA-QGETTTGINVRKGAITNI 326
++ Y RAFA ALEVIP+ L+EN+G+NPI T+TE+R R + GI+ ++
Sbjct: 442 TLEQYAMRAFADALEVIPMALSENSGMNPIQTMTEVRARQVKEMNPALGIDCLHKGTNDM 501
Query: 327 LEENVVQPLLVSTSAITLSTETVRSILKIDDI 358
+++V++ L+ I+L+T+ VR ILKIDDI
Sbjct: 502 KQQHVIETLIGKKQQISLATQMVRMILKIDDI 533
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 45/56 (80%)
Query: 29 SNIGAAKAVADAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMNVIHPAAKMM 84
S+I AAKAVA+ +RTSLGP G+DKM+ +G+VT+TNDGATIL M+V H AK+M
Sbjct: 36 SHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLM 91
>sp|Q9UTM4|TCPE_SCHPO T-complex protein 1 subunit epsilon OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=cct5 PE=3 SV=1
Length = 546
Score = 284 bits (727), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 179/489 (36%), Positives = 271/489 (55%), Gaps = 45/489 (9%)
Query: 354 KIDDILVELSKAQDIEAGDGTTSVVIVAGSLLEAAEKLLHKGIHPTTISDAFQKAAAKCV 413
+I +LV+LSK+QD E GDGTT VV++AG+LLE AE L+ KGIHP I+D ++KA V
Sbjct: 88 QIAKLLVQLSKSQDDEIGDGTTGVVVLAGALLEQAEALIDKGIHPIRIADGYEKACQVAV 147
Query: 414 EILTEMSTPITLA--DRENLIKSAATSLNSKVVSQQASLLAPIAVDAVLKVVNPQRDTNV 471
+ L +S + + + NL +SA TSL SKVVS+ A IAVDAVL V + QR +V
Sbjct: 148 KHLDAISDVVDFSPENTTNLFRSAKTSLGSKVVSKAHDHFANIAVDAVLSVADLQR-KDV 206
Query: 472 DLKDIKVIRKLGGTVEDTELVDGLVFTQKSANVNGPKRVEKAKIGLIQFCISPPKTDMDH 531
D + IKV K+GG+V+DT+LV G+V + ++ P R+E AKI ++ PPK H
Sbjct: 207 DFELIKVDGKVGGSVDDTKLVKGVVVDKDMSHPQMPHRIENAKIAILTCPFEPPKPKTKH 266
Query: 532 KVVVSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKIKV 591
K+ ++ S + + E+ ++K +K AG N+++ Q D A H L + +
Sbjct: 267 KLDITSVSEFEALQAYEKEKFQEMIKHVKDAGANLVICQW-----GFDDEANHLLLQNNL 321
Query: 592 LVVKDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSR--FVKISGIQN 649
V+ + +IE + N R + + + L SA +V E+ G +R + I N
Sbjct: 322 PAVRWVGGPEIELIAIATNGRIVPRFEDLSSDKLGSAGIVREVSFGTTRDKILVIEKCAN 381
Query: 650 PGRTLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYAD 709
R +TV VRGSNK+++DEA R+LHDALCVVR L++ ++ GGGA EI SL +TK A+
Sbjct: 382 -SRAVTVFVRGSNKMIVDEAKRALHDALCVVRNLIRDNRVVYGGGAAEISCSLAVTKEAE 440
Query: 710 TVSGIDAYCFRALIAGGGAPEIELSLKLTKYADTVSGIDAYCFRAFAQALEVIPLTLAEN 769
+ GI D Y AFA AL+ IPL LAEN
Sbjct: 441 KIPGI---------------------------------DQYSMGAFADALDTIPLALAEN 467
Query: 770 AGLNPISTVTELRNRHA-QGETTTGINVRKGAITNILEENVVQPLLVSTSAITLSTETVR 828
+GL+ I +T ++ RH + + GI+ + ++ ++ V+ PL+ + L+T+ R
Sbjct: 468 SGLSSIEALTAVKARHVKENKAYLGIDCLQTGSNDMRKQFVIDPLIGKKQQLLLATQLCR 527
Query: 829 SILKIDDIV 837
+LK++DI+
Sbjct: 528 MVLKVNDII 536
Score = 170 bits (431), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 101/294 (34%), Positives = 161/294 (54%), Gaps = 9/294 (3%)
Query: 77 IHPAAKMMDHKVVVSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDL 136
P HK+ ++ S + + E+ ++K +K AG N+++ Q D
Sbjct: 257 FEPPKPKTKHKLDITSVSEFEALQAYEKEKFQEMIKHVKDAGANLVICQW-----GFDDE 311
Query: 137 AIHFLDKIKVLVVKDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSR- 195
A H L + + V+ + +IE + N R + + + L SA +V E+ G +R
Sbjct: 312 ANHLLLQNNLPAVRWVGGPEIELIAIATNGRIVPRFEDLSSDKLGSAGIVREVSFGTTRD 371
Query: 196 -FVKISGIQNPGRTLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIE 254
+ I N R +TV VRGSNK+++DEA R+LHDALCVVR L++ ++ GGGA EI
Sbjct: 372 KILVIEKCAN-SRAVTVFVRGSNKMIVDEAKRALHDALCVVRNLIRDNRVVYGGGAAEIS 430
Query: 255 LSLKLTKYADTVSGIDAYCFRAFAQALEVIPLTLAENAGLNPISTVTELRNRHA-QGETT 313
SL +TK A+ + GID Y AFA AL+ IPL LAEN+GL+ I +T ++ RH + +
Sbjct: 431 CSLAVTKEAEKIPGIDQYSMGAFADALDTIPLALAENSGLSSIEALTAVKARHVKENKAY 490
Query: 314 TGINVRKGAITNILEENVVQPLLVSTSAITLSTETVRSILKIDDILVELSKAQD 367
GI+ + ++ ++ V+ PL+ + L+T+ R +LK++DI+V SK D
Sbjct: 491 LGIDCLQTGSNDMRKQFVIDPLIGKKQQLLLATQLCRMVLKVNDIIVAGSKDDD 544
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 48/67 (71%)
Query: 18 KDKSKATDIRNSNIGAAKAVADAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMNVI 77
K + D S+I A K VA+ +RTSLGPRG+DK++ + +GE+T+TNDGATIL QM V
Sbjct: 27 KRRLHGIDAVKSHILATKTVANIVRTSLGPRGLDKILISPDGEITVTNDGATILDQMEVE 86
Query: 78 HPAAKMM 84
H AK++
Sbjct: 87 HQIAKLL 93
>sp|Q53546|THS_DESSY Thermosome subunit OS=Desulfurococcus sp. (strain SY) GN=ths PE=3
SV=1
Length = 545
Score = 283 bits (724), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 167/481 (34%), Positives = 271/481 (56%), Gaps = 40/481 (8%)
Query: 358 ILVELSKAQDIEAGDGTTSVVIVAGSLLEAAEKLLHKGIHPTTISDAFQKAAAKCVEILT 417
++VE++K QD EAGDGTT+ V++AG LL+ AE+LL + IHP+ I + AA K EIL
Sbjct: 81 MMVEVAKTQDKEAGDGTTTAVVIAGELLKKAEELLDQNIHPSIIIKGYALAAEKAQEILE 140
Query: 418 EMSTPITLADRENLIKSAATSLNSKVVSQQASLLAPIAVDAVLKVVNPQRDT-NVDLKDI 476
++ ++ D E L K+A TS+ K ++ LA IAV+AV +V D VDL +I
Sbjct: 141 GIAKEVSPDDVETLKKAAVTSITGKAAEEEREYLAEIAVEAVRQVAEKVGDKYKVDLDNI 200
Query: 477 KVIRKLGGTVEDTELVDGLVFTQKSANVNGPKRVEKAKIGLIQFCISPPKTDMDHKVVVS 536
K +K G +V +T+L+ G+V ++ + PKRVE AKI LI + +T+ D ++ ++
Sbjct: 201 KFEKKEGASVHETQLIRGVVIDKEVVHPGMPKRVENAKIALINDALEVKETETDAEIRIT 260
Query: 537 DYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKIKVLVVKD 596
+ L++E + +V +IK+ G NV+ VQK I DLA H+L K ++ V+
Sbjct: 261 SPEQLQAFLEQEERMLREMVDKIKEVGANVVFVQKG-----IDDLAQHYLAKYGIMAVRR 315
Query: 597 IEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISGIQNPGRTLTV 656
+++ D+E + K + + ++ PE L A+LVE+ + + G +NP + +T+
Sbjct: 316 VKKSDMEKLAKATGAKIVTNVRDLTPEDLGEAELVEQRKVAGENMIFVEGCKNP-KAVTI 374
Query: 657 VVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYADTVSGIDA 716
++RG + V+DE R+L DA+ VV+ +V+ ++ GGAPEIEL++KL +Y
Sbjct: 375 LIRGGTEHVVDEVERALEDAVKVVKDIVEDGKILPAGGAPEIELAIKLDEY--------- 425
Query: 717 YCFRALIAGGGAPEIELSLKLTKYADTVSGIDAYCFRAFAQALEVIPLTLAENAGLNPIS 776
A V G + AFA+AL+VIP TLAENAGL+P+
Sbjct: 426 ------------------------AKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPVE 461
Query: 777 TVTELRNRHAQGETTTGINVRKGAITNILEENVVQPLLVSTSAITLSTETVRSILKIDDI 836
T+ ++ H + T G++V +G +++E+ V+ PL V AI ++E IL+IDD+
Sbjct: 462 TLVKVIAAHKEKGPTIGVDVFEGEPADMMEKGVIAPLRVPKQAIKSASEAAIMILRIDDV 521
Query: 837 V 837
+
Sbjct: 522 I 522
Score = 184 bits (468), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 107/326 (32%), Positives = 185/326 (56%), Gaps = 17/326 (5%)
Query: 49 GMDKMIQASNGEVTITNDGATILKQMNVIHPAAKMMDHKVVVSDYSAMDRVLKEERAYIL 108
GM K ++ N ++ + ND A +K+ D ++ ++ + L++E +
Sbjct: 229 GMPKRVE--NAKIALIND-ALEVKETET--------DAEIRITSPEQLQAFLEQEERMLR 277
Query: 109 NIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKIKVLVVKDIEREDIEFVCKTLNTRP 168
+V +IK+ G NV+ VQK I DLA H+L K ++ V+ +++ D+E + K +
Sbjct: 278 EMVDKIKEVGANVVFVQKGI-----DDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKI 332
Query: 169 IASLDHFLPEHLSSADLVEEIPAGNSRFVKISGIQNPGRTLTVVVRGSNKLVLDEAARSL 228
+ ++ PE L A+LVE+ + + G +NP + +T+++RG + V+DE R+L
Sbjct: 333 VTNVRDLTPEDLGEAELVEQRKVAGENMIFVEGCKNP-KAVTILIRGGTEHVVDEVERAL 391
Query: 229 HDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYADTVSGIDAYCFRAFAQALEVIPLTL 288
DA+ VV+ +V+ ++ GGAPEIEL++KL +YA V G + AFA+AL+VIP TL
Sbjct: 392 EDAVKVVKDIVEDGKILPAGGAPEIELAIKLDEYAKEVGGKEQLAIEAFAEALKVIPRTL 451
Query: 289 AENAGLNPISTVTELRNRHAQGETTTGINVRKGAITNILEENVVQPLLVSTSAITLSTET 348
AENAGL+P+ T+ ++ H + T G++V +G +++E+ V+ PL V AI ++E
Sbjct: 452 AENAGLDPVETLVKVIAAHKEKGPTIGVDVFEGEPADMMEKGVIAPLRVPKQAIKSASEA 511
Query: 349 VRSILKIDDILVELSKAQDIEAGDGT 374
IL+IDD++ +D E G+
Sbjct: 512 AIMILRIDDVIAASKLEKDKEDKGGS 537
Score = 80.1 bits (196), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 51/73 (69%)
Query: 25 DIRNSNIGAAKAVADAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMNVIHPAAKMM 84
D + NI AA+ VA+ IRT+LGP+GMDKM+ S G++ ITNDGATIL +M++ HPAAKMM
Sbjct: 23 DAQRLNILAARIVAETIRTTLGPKGMDKMLVDSLGDIVITNDGATILDEMDIQHPAAKMM 82
Query: 85 DHKVVVSDYSAMD 97
D A D
Sbjct: 83 VEVAKTQDKEAGD 95
>sp|P50016|THS_METKA Thermosome subunit OS=Methanopyrus kandleri (strain AV19 / DSM 6324
/ JCM 9639 / NBRC 100938) GN=ths PE=3 SV=1
Length = 545
Score = 280 bits (717), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 170/481 (35%), Positives = 272/481 (56%), Gaps = 40/481 (8%)
Query: 358 ILVELSKAQDIEAGDGTTSVVIVAGSLLEAAEKLLHKGIHPTTISDAFQKAAAKCVEILT 417
++VE++K Q+ E GDGTT+ V++AG LL AE LL + IHPT I+ ++ A K EIL
Sbjct: 83 MVVEVAKTQEDEVGDGTTTAVVLAGELLHKAEDLLQQDIHPTVIARGYRMAVEKAEEILE 142
Query: 418 EMSTPITLADRENLIKSAATSLNSKVVSQQASLLAPIAVDAVLKVVNPQR-DTNVDLKDI 476
E++ I D E L K A T++ K V + LA + V AV +V + + +D I
Sbjct: 143 EIAEEIDPDDEETLKKIAKTAMTGKGVEKARDYLAELVVKAVKQVAEEEDGEIVIDTDHI 202
Query: 477 KVIRKLGGTVEDTELVDGLVFTQKSANVNGPKRVEKAKIGLIQFCISPPKTDMDHKVVVS 536
K+ +K GG +EDTELV G+V ++ + P+RVE AKI L+ I +T+ D ++ ++
Sbjct: 203 KLEKKEGGGLEDTELVKGMVIDKERVHPGMPRRVENAKIALLNCPIEVKETETDAEIRIT 262
Query: 537 DYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKIKVLVVKD 596
D + ++EE + +V +I + G NV+ QK I DLA H+L K +L V+
Sbjct: 263 DPEQLQAFIEEEERMLSEMVDKIAETGANVVFCQKG-----IDDLAQHYLAKKGILAVRR 317
Query: 597 IEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISGIQNPGRTLTV 656
+++ D++ + + R + ++D E L A++VEE + + + G ++P + +T+
Sbjct: 318 VKKSDMQKLARATGARIVTNIDDLSEEDLGEAEVVEEKKVAGDKMIFVEGCKDP-KAVTI 376
Query: 657 VVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYADTVSGIDA 716
++RG + V+DEA R++ DA+ VV ++ ++AGGGAPE+E++ +L +AD V G
Sbjct: 377 LIRGGTEHVVDEAERAIEDAIGVVAAALEDGKVVAGGGAPEVEVARQLRDFADGVEG--- 433
Query: 717 YCFRALIAGGGAPEIELSLKLTKYADTVSGIDAYCFRAFAQALEVIPLTLAENAGLNPIS 776
R +A AFA ALE+IP TLAEN+GL+PI
Sbjct: 434 ---REQLA---------------------------VEAFADALEIIPRTLAENSGLDPID 463
Query: 777 TVTELRNRHAQGETTTGINVRKGAITNILEENVVQPLLVSTSAITLSTETVRSILKIDDI 836
+ +LR +H G+ T GI+V G + ++LEE VV+PL V T A+ +TE IL+IDD+
Sbjct: 464 VLVQLRAKHEDGQVTAGIDVYDGDVKDMLEEGVVEPLRVKTQALASATEAAEMILRIDDV 523
Query: 837 V 837
+
Sbjct: 524 I 524
Score = 201 bits (510), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 103/282 (36%), Positives = 172/282 (60%), Gaps = 8/282 (2%)
Query: 85 DHKVVVSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKI 144
D ++ ++D + ++EE + +V +I + G NV+ QK I DLA H+L K
Sbjct: 256 DAEIRITDPEQLQAFIEEEERMLSEMVDKIAETGANVVFCQKGI-----DDLAQHYLAKK 310
Query: 145 KVLVVKDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISGIQN 204
+L V+ +++ D++ + + R + ++D E L A++VEE + + + G ++
Sbjct: 311 GILAVRRVKKSDMQKLARATGARIVTNIDDLSEEDLGEAEVVEEKKVAGDKMIFVEGCKD 370
Query: 205 PGRTLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYAD 264
P + +T+++RG + V+DEA R++ DA+ VV ++ ++AGGGAPE+E++ +L +AD
Sbjct: 371 P-KAVTILIRGGTEHVVDEAERAIEDAIGVVAAALEDGKVVAGGGAPEVEVARQLRDFAD 429
Query: 265 TVSGIDAYCFRAFAQALEVIPLTLAENAGLNPISTVTELRNRHAQGETTTGINVRKGAIT 324
V G + AFA ALE+IP TLAEN+GL+PI + +LR +H G+ T GI+V G +
Sbjct: 430 GVEGREQLAVEAFADALEIIPRTLAENSGLDPIDVLVQLRAKHEDGQVTAGIDVYDGDVK 489
Query: 325 NILEENVVQPLLVSTSAITLSTETVRSILKIDDILV--ELSK 364
++LEE VV+PL V T A+ +TE IL+IDD++ ELSK
Sbjct: 490 DMLEEGVVEPLRVKTQALASATEAAEMILRIDDVIAARELSK 531
Score = 74.3 bits (181), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 46/60 (76%)
Query: 25 DIRNSNIGAAKAVADAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMNVIHPAAKMM 84
D + NI AA+ VA+ +RT+LGP GMDKM+ G+V +TNDG TIL++M++ HPAAKM+
Sbjct: 25 DAQRMNIMAARVVAETVRTTLGPMGMDKMLVDEMGDVVVTNDGVTILEEMDIEHPAAKMV 84
>sp|Q58405|THS_METJA Thermosome subunit OS=Methanocaldococcus jannaschii (strain ATCC
43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=ths PE=3 SV=1
Length = 542
Score = 279 bits (713), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 169/481 (35%), Positives = 273/481 (56%), Gaps = 41/481 (8%)
Query: 358 ILVELSKAQDIEAGDGTTSVVIVAGSLLEAAEKLLHKGIHPTTISDAFQKAAAKCVEILT 417
+L+E++K Q+ E GDGTT+ V++AG LL AE+LL + IHP+ I + ++ A K VE L
Sbjct: 80 MLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNIHPSVIINGYEMARNKAVEELK 139
Query: 418 EMSTPITLADRENLIKSAATSLNSKVVSQQASLLAPIAVDAVLKVVNPQRDTNVDLKDIK 477
++ + D E L K A TS+ K + LA I V+AV VV+ + VD IK
Sbjct: 140 SIAKEVKPEDTEMLKKIAMTSITGKGAEKAREQLAEIVVEAVRAVVD-EETGKVDKDLIK 198
Query: 478 VIRKLGGTVEDTELVDGLVFTQKSANVNGPKRVEKAKIGLIQFCISPPKTDMDHKVVVSD 537
V +K G +E+T+L+ G+V ++ N PK+VE AKI L+ I +T+ D ++ ++D
Sbjct: 199 VEKKEGAPIEETKLIRGVVIDKERVNPQMPKKVENAKIALLNCPIEVKETETDAEIRITD 258
Query: 538 YSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKIKVLVVKDI 597
+ + +++E I ++V++I G NV+ QK I DLA H+L K +L V+ +
Sbjct: 259 PAKLMEFIEQEEKMIKDMVEKIAATGANVVFCQKG-----IDDLAQHYLAKKGILAVRRV 313
Query: 598 EREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISGIQNPGRTLTVV 657
++ D+E + K R + +D PE L A LVEE + + ++P + +T++
Sbjct: 314 KKSDMEKLAKATGARIVTKIDDLTPEDLGEAGLVEERKVAGDAMIFVEQCKHP-KAVTIL 372
Query: 658 VRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYADTVSGIDAY 717
RGS + V++E AR++ DA+ VV+C +++ ++AGGGA EIEL+ +L K+A
Sbjct: 373 ARGSTEHVVEEVARAIDDAIGVVKCALEEGKIVAGGGATEIELAKRLRKFA--------- 423
Query: 718 CFRALIAGGGAPEIELSLKLTKYADTVSGIDAYCFRAFAQALEVIPLTLAENAGLNPIST 777
++V+G + +AFA ALEVIP TLAEN+GL+PI
Sbjct: 424 ------------------------ESVAGREQLAVKAFADALEVIPRTLAENSGLDPIDM 459
Query: 778 VTELRNRH-AQGETTTGINVRKGAITNILEENVVQPLLVSTSAITLSTETVRSILKIDDI 836
+ +LR H +G G++V +G + ++LE+ VV+PL V T AI +TE +L+IDD+
Sbjct: 460 LVKLRAAHEKEGGEVYGLDVFEGEVVDMLEKGVVEPLKVKTQAIDSATEASVMLLRIDDV 519
Query: 837 V 837
+
Sbjct: 520 I 520
Score = 192 bits (487), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 102/276 (36%), Positives = 172/276 (62%), Gaps = 7/276 (2%)
Query: 85 DHKVVVSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKI 144
D ++ ++D + + +++E I ++V++I G NV+ QK I DLA H+L K
Sbjct: 251 DAEIRITDPAKLMEFIEQEEKMIKDMVEKIAATGANVVFCQKGI-----DDLAQHYLAKK 305
Query: 145 KVLVVKDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISGIQN 204
+L V+ +++ D+E + K R + +D PE L A LVEE + + ++
Sbjct: 306 GILAVRRVKKSDMEKLAKATGARIVTKIDDLTPEDLGEAGLVEERKVAGDAMIFVEQCKH 365
Query: 205 PGRTLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYAD 264
P + +T++ RGS + V++E AR++ DA+ VV+C +++ ++AGGGA EIEL+ +L K+A+
Sbjct: 366 P-KAVTILARGSTEHVVEEVARAIDDAIGVVKCALEEGKIVAGGGATEIELAKRLRKFAE 424
Query: 265 TVSGIDAYCFRAFAQALEVIPLTLAENAGLNPISTVTELRNRH-AQGETTTGINVRKGAI 323
+V+G + +AFA ALEVIP TLAEN+GL+PI + +LR H +G G++V +G +
Sbjct: 425 SVAGREQLAVKAFADALEVIPRTLAENSGLDPIDMLVKLRAAHEKEGGEVYGLDVFEGEV 484
Query: 324 TNILEENVVQPLLVSTSAITLSTETVRSILKIDDIL 359
++LE+ VV+PL V T AI +TE +L+IDD++
Sbjct: 485 VDMLEKGVVEPLKVKTQAIDSATEASVMLLRIDDVI 520
Score = 74.3 bits (181), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 46/60 (76%)
Query: 25 DIRNSNIGAAKAVADAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMNVIHPAAKMM 84
D + NI A + +A+ +RT+LGP+GMDKM+ G++ +TNDG TILK+M+V HPAAKM+
Sbjct: 22 DAQRMNILAGRIIAETVRTTLGPKGMDKMLVDELGDIVVTNDGVTILKEMSVEHPAAKML 81
>sp|O24734|THSA_SULTO Thermosome subunit alpha OS=Sulfolobus tokodaii (strain DSM 16993 /
JCM 10545 / NBRC 100140 / 7) GN=thsA PE=1 SV=1
Length = 559
Score = 279 bits (713), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 179/491 (36%), Positives = 281/491 (57%), Gaps = 50/491 (10%)
Query: 358 ILVELSKAQDIEAGDGTTSVVIVAGSLLEAAEKLLHKGIHPTTISDAFQKAAAKCVEILT 417
+LVE +KAQD E GDGTTS V++AG LL+ A+ LL + IHPT I + ++KA K +EI+
Sbjct: 78 LLVEAAKAQDAEVGDGTTSAVVLAGLLLDKADDLLDQNIHPTIIIEGYKKALNKSLEIID 137
Query: 418 EMSTPI------TLADRENLIKSAATSLNSKVVS--QQASLLAPIAVDAVLKVVN--PQR 467
+++T I +LA R+ L K T+++SK ++ ++ + + +DAV V P+
Sbjct: 138 QLATKIDVSNLNSLATRDQLKKIVYTTMSSKFIAGGEEMDKIMNMVIDAVSIVAEPLPEG 197
Query: 468 DTNVDLKDIKVIRKLGGTVEDTELVDGLVFTQKSANVNGPKRVEKAKIGLIQFCISPPKT 527
NV L IK+ +K GG++ED+ LV GLV ++ + P+RVEKAKI ++ + K
Sbjct: 198 GYNVPLDLIKIDKKKGGSIEDSMLVHGLVLDKEVVHPGMPRRVEKAKIAVLDAALEVEKP 257
Query: 528 DMDHKVVVSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLD 587
++ K+ ++ + L EE Y+ ++V ++ G NV++ QK I D+A HFL
Sbjct: 258 EISAKISITSPEQIKAFLDEEAKYLKDMVDKLASIGANVVICQK-----GIDDVAQHFLA 312
Query: 588 KIKVLVVKDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISGI 647
K +L V+ ++R DIE + K L R I+S+ PE L A+LVEE GN + V I G
Sbjct: 313 KKGILAVRRVKRSDIEKLEKALGARIISSIKDATPEDLGYAELVEERRVGNDKMVFIEGA 372
Query: 648 QNPGRTLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKY 707
+NP + + +++RGSN + LDEA RS++DAL +R ++ + ++AGGGA E EL+L+L +Y
Sbjct: 373 KNP-KAVNILLRGSNDMALDEAERSINDALHSLRNVLMKPMIVAGGGAVETELALRLREY 431
Query: 708 ADTVSGIDAYCFRALIAGGGAPEIELSLKLTKYADTVSGIDAYCFRAFAQALEVIPLTLA 767
A +V G + FA+ALE IP+ LA
Sbjct: 432 ---------------------------------ARSVGGKEQLAIEKFAEALEEIPMILA 458
Query: 768 ENAGLNPISTVTELRNRHAQGETTTGINVRKGAIT-NILEENVVQPLLVSTSAITLSTET 826
E AG+ PI T+ +LR +HA+G G++V G I ++L NV++P+ V + + E
Sbjct: 459 ETAGMEPIQTLMDLRAKHAKGLINAGVDVMNGKIADDMLALNVLEPVRVKAQVLKSAVEA 518
Query: 827 VRSILKIDDIV 837
+ILKIDD++
Sbjct: 519 ATAILKIDDLI 529
Score = 196 bits (499), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 108/274 (39%), Positives = 168/274 (61%), Gaps = 7/274 (2%)
Query: 87 KVVVSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKIKV 146
K+ ++ + L EE Y+ ++V ++ G NV++ QK I D+A HFL K +
Sbjct: 262 KISITSPEQIKAFLDEEAKYLKDMVDKLASIGANVVICQK-----GIDDVAQHFLAKKGI 316
Query: 147 LVVKDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISGIQNPG 206
L V+ ++R DIE + K L R I+S+ PE L A+LVEE GN + V I G +NP
Sbjct: 317 LAVRRVKRSDIEKLEKALGARIISSIKDATPEDLGYAELVEERRVGNDKMVFIEGAKNP- 375
Query: 207 RTLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYADTV 266
+ + +++RGSN + LDEA RS++DAL +R ++ + ++AGGGA E EL+L+L +YA +V
Sbjct: 376 KAVNILLRGSNDMALDEAERSINDALHSLRNVLMKPMIVAGGGAVETELALRLREYARSV 435
Query: 267 SGIDAYCFRAFAQALEVIPLTLAENAGLNPISTVTELRNRHAQGETTTGINVRKGAIT-N 325
G + FA+ALE IP+ LAE AG+ PI T+ +LR +HA+G G++V G I +
Sbjct: 436 GGKEQLAIEKFAEALEEIPMILAETAGMEPIQTLMDLRAKHAKGLINAGVDVMNGKIADD 495
Query: 326 ILEENVVQPLLVSTSAITLSTETVRSILKIDDIL 359
+L NV++P+ V + + E +ILKIDD++
Sbjct: 496 MLALNVLEPVRVKAQVLKSAVEAATAILKIDDLI 529
Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 50/65 (76%)
Query: 20 KSKATDIRNSNIGAAKAVADAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMNVIHP 79
+S D +NI AA +A+ +++SLGPRG+DKM+ S G+VTITNDGATI+K+M + HP
Sbjct: 15 RSSGRDALKNNILAAVTLAEMLKSSLGPRGLDKMLIDSFGDVTITNDGATIVKEMEIQHP 74
Query: 80 AAKMM 84
AAK++
Sbjct: 75 AAKLL 79
>sp|O26320|THSA_METTH Thermosome subunit alpha OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=thsA PE=3 SV=2
Length = 542
Score = 278 bits (712), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 181/557 (32%), Positives = 305/557 (54%), Gaps = 58/557 (10%)
Query: 293 GLNPISTVTELRNRHAQGETTTGINVRKGAI------TNILEENVVQPLLVSTSAITLST 346
G PI + + +R+ G IN+ G + T + + + + L+ S I ++
Sbjct: 4 GQQPIFILPQDTSRYV-GREAQRINILAGKVLAETVRTTLGPKGMDKMLVDSLGDIVITN 62
Query: 347 ETVRSILKID------DILVELSKAQDIEAGDGTTSVVIVAGSLLEAAEKLLHKGIHPTT 400
+ V + ++D +LVE++K Q+ E GDGTT+ VI+AG LL+ AEKL+ G+HPT
Sbjct: 63 DGVTILREMDISHPAAKMLVEVAKTQEDEVGDGTTTAVIIAGELLKEAEKLIEMGVHPTI 122
Query: 401 ISDAFQKAAAKCVEILTEMSTPITLADRENLIKSAATSLNSKVVSQQASLLAPIAVDAVL 460
I+ ++ AA K EIL E+S + +DR+ L+K A T++ K + LA + VDAV+
Sbjct: 123 IALGYRNAALKAQEILEEIS--MEASDRDTLMKVAITAMTGKGSERAKEKLAELVVDAVM 180
Query: 461 KVVNPQRDTNVDLKDIKVIRKLGGTVEDTELVDGLVFTQKSANVNGPKRVEKAKIGLIQF 520
+V + D +D +I + R G +V ++ +V+G+V + A+ + PKR+EKA+I L+++
Sbjct: 181 QV---EEDGEIDKDNINIQRIQGASVNESRIVNGIVIDKSRADTSMPKRIEKARIALLKY 237
Query: 521 CISPPKTDMDHKVVVSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISD 580
I + D K+ ++D S M +++E I ++V++IK +G NV+ QK I D
Sbjct: 238 PIEVKDLETDAKIRLTDPSQMQAFIEQEEQMIRDMVEKIKSSGANVVFCQK-----GIDD 292
Query: 581 LAIHFLDKIKVLVVKDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSR 640
LA+H+L + ++ +K +++ DI+ + K R + ++D E L A ++ E +
Sbjct: 293 LALHYLSREGIMALKRVKKSDIKRIEKATGARLVTNIDDLTAEDLGEAGVIYEKKIFDEV 352
Query: 641 FVKISGIQNPGRTLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIEL 700
I ++P + +++++RGS K V +E R+L DA+ VV ++ R ++AGGGAPE+E+
Sbjct: 353 LTFIEECRDP-KAISIILRGSTKHVAEEMERALEDAIGVVASTLEDREVVAGGGAPEVEI 411
Query: 701 SLKLTKYADTVSGIDAYCFRALIAGGGAPEIELSLKLTKYADTVSGIDAYCFRAFAQALE 760
+ KL +YADT+SG R +A AFA ALE
Sbjct: 412 ARKLREYADTISG------REQLA---------------------------VSAFADALE 438
Query: 761 VIPLTLAENAGLNPISTVTELRNRHAQGETTTGINVRKGAITNILEENVVQPLLVSTSAI 820
++P TLAENAGL+ I + +LR H + GI+V G I ++ E V++P V AI
Sbjct: 439 IVPKTLAENAGLDSIDVLVDLRAAHEES-PYMGIDVFDGNIVDMKEAGVIEPQRVKKQAI 497
Query: 821 TLSTETVRSILKIDDIV 837
+ E IL+IDD++
Sbjct: 498 QSAAEAAEMILRIDDMI 514
Score = 179 bits (454), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 98/275 (35%), Positives = 163/275 (59%), Gaps = 7/275 (2%)
Query: 85 DHKVVVSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKI 144
D K+ ++D S M +++E I ++V++IK +G NV+ QK I DLA+H+L +
Sbjct: 247 DAKIRLTDPSQMQAFIEQEEQMIRDMVEKIKSSGANVVFCQK-----GIDDLALHYLSRE 301
Query: 145 KVLVVKDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISGIQN 204
++ +K +++ DI+ + K R + ++D E L A ++ E + I ++
Sbjct: 302 GIMALKRVKKSDIKRIEKATGARLVTNIDDLTAEDLGEAGVIYEKKIFDEVLTFIEECRD 361
Query: 205 PGRTLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYAD 264
P + +++++RGS K V +E R+L DA+ VV ++ R ++AGGGAPE+E++ KL +YAD
Sbjct: 362 P-KAISIILRGSTKHVAEEMERALEDAIGVVASTLEDREVVAGGGAPEVEIARKLREYAD 420
Query: 265 TVSGIDAYCFRAFAQALEVIPLTLAENAGLNPISTVTELRNRHAQGETTTGINVRKGAIT 324
T+SG + AFA ALE++P TLAENAGL+ I + +LR H + GI+V G I
Sbjct: 421 TISGREQLAVSAFADALEIVPKTLAENAGLDSIDVLVDLRAAHEES-PYMGIDVFDGNIV 479
Query: 325 NILEENVVQPLLVSTSAITLSTETVRSILKIDDIL 359
++ E V++P V AI + E IL+IDD++
Sbjct: 480 DMKEAGVIEPQRVKKQAIQSAAEAAEMILRIDDMI 514
Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 45/55 (81%)
Query: 30 NIGAAKAVADAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMNVIHPAAKMM 84
NI A K +A+ +RT+LGP+GMDKM+ S G++ ITNDG TIL++M++ HPAAKM+
Sbjct: 27 NILAGKVLAETVRTTLGPKGMDKMLVDSLGDIVITNDGVTILREMDISHPAAKML 81
>sp|P80316|TCPE_MOUSE T-complex protein 1 subunit epsilon OS=Mus musculus GN=Cct5 PE=1
SV=1
Length = 541
Score = 278 bits (710), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 180/507 (35%), Positives = 283/507 (55%), Gaps = 55/507 (10%)
Query: 342 ITLSTETVRSILKIDD----ILVELSKAQDIEAGDGTTSVVIVAGSLLEAAEKLLHKGIH 397
IT T+ S++ +D ++VELSK+QD E GDGTT VV++AG+LLE AE+LL +GIH
Sbjct: 70 ITNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIH 129
Query: 398 PTTISDAFQKAAAKCVEILTEMSTP--ITLADRENLIKSAATSLNSKVVSQQASLLAPIA 455
P I+D +++AA ++ L ++S + + + E LI++A T+L SKV++ +A IA
Sbjct: 130 PIRIADGYEQAARIAIQHLDKISDKVLVDINNPEPLIQTAKTTLGSKVINSCHRQMAEIA 189
Query: 456 VDAVLKVVNPQRDTNVDLKDIKVIRKLGGTVEDTELVDGLVFTQKSANVNGPKRVEKAKI 515
V+AVL V + +R +VD + IKV K+GG +EDT+L+ G++ + ++ PK+V AKI
Sbjct: 190 VNAVLTVADMER-RDVDFELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPQMPKKVVDAKI 248
Query: 516 GLIQFCISPPKTDMDHK---VVVSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKS 572
++ PPK HK + V DY A+ + KE+ ++KQIK+ G N+ + Q
Sbjct: 249 AILTCPFEPPKPKTKHKLDVMSVEDYKALQKYEKEK---FEEMIKQIKETGANLAICQW- 304
Query: 573 ILRDAISDLAIHFLDKIKVLVVKDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVE 632
D A H L + + V+ + +IE + R + E L A +V+
Sbjct: 305 ----GFDDEANHLLLQNGLPAVRWVGGPEIELIAIATGGRIVPRFSELTSEKLGFAGVVQ 360
Query: 633 EIPAGNS--RFVKISGIQNPGRTLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALI 690
EI G + + + I +N R +T+ +RG NK++++EA RSLHDALCV+R L++ ++
Sbjct: 361 EISFGTTKDKMLVIEKCKN-SRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVV 419
Query: 691 AGGGAPEIELSLKLTKYADTVSGIDAYCFRALIAGGGAPEIELSLKLTKYADTVSGIDAY 750
GGGA EI +L +++ AD P +E Y
Sbjct: 420 YGGGAAEISCALAVSQEADK-----------------CPTLE----------------QY 446
Query: 751 CFRAFAQALEVIPLTLAENAGLNPISTVTELRNRHA-QGETTTGINVRKGAITNILEENV 809
RAFA ALEVIP+ L+EN+G+NPI T+TE+R R + GI+ ++ ++V
Sbjct: 447 AMRAFADALEVIPMALSENSGMNPIQTMTEVRARQVKESNPALGIDCLHKGSNDMQYQHV 506
Query: 810 VQPLLVSTSAITLSTETVRSILKIDDI 836
++ L+ I+L+T+ VR ILKIDDI
Sbjct: 507 IETLIGKKQQISLATQMVRMILKIDDI 533
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/272 (35%), Positives = 154/272 (56%), Gaps = 12/272 (4%)
Query: 90 VSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKIKVLVV 149
V DY A+ + KE+ ++KQIK+ G N+ + Q D A H L + + V
Sbjct: 271 VEDYKALQKYEKEK---FEEMIKQIKETGANLAICQW-----GFDDEANHLLLQNGLPAV 322
Query: 150 KDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNS--RFVKISGIQNPGR 207
+ + +IE + R + E L A +V+EI G + + + I +N R
Sbjct: 323 RWVGGPEIELIAIATGGRIVPRFSELTSEKLGFAGVVQEISFGTTKDKMLVIEKCKN-SR 381
Query: 208 TLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYADTVS 267
+T+ +RG NK++++EA RSLHDALCV+R L++ ++ GGGA EI +L +++ AD
Sbjct: 382 AVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKCP 441
Query: 268 GIDAYCFRAFAQALEVIPLTLAENAGLNPISTVTELRNRHA-QGETTTGINVRKGAITNI 326
++ Y RAFA ALEVIP+ L+EN+G+NPI T+TE+R R + GI+ ++
Sbjct: 442 TLEQYAMRAFADALEVIPMALSENSGMNPIQTMTEVRARQVKESNPALGIDCLHKGSNDM 501
Query: 327 LEENVVQPLLVSTSAITLSTETVRSILKIDDI 358
++V++ L+ I+L+T+ VR ILKIDDI
Sbjct: 502 QYQHVIETLIGKKQQISLATQMVRMILKIDDI 533
Score = 73.2 bits (178), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 45/56 (80%)
Query: 29 SNIGAAKAVADAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMNVIHPAAKMM 84
S+I AAKAVA+ +RTSLGP G+DKM+ +G+VTITNDGATIL M+V H AK+M
Sbjct: 36 SHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTITNDGATILSMMDVDHQIAKLM 91
>sp|O30561|THS1_HALVD Thermosome subunit 1 OS=Haloferax volcanii (strain ATCC 29605 / DSM
3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 /
DS2) GN=cct1 PE=1 SV=1
Length = 560
Score = 278 bits (710), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 175/545 (32%), Positives = 295/545 (54%), Gaps = 54/545 (9%)
Query: 305 NRHAQGETTTGINVRKG-----AITNILEENVVQPLLVSTSAITLSTETVRSILKIDDI- 358
++ G+ +N+ G A+ L + +LV + + T +ILK DI
Sbjct: 18 SQRTSGQDAQSMNITAGKAVAEAVRTTLGPKGMDKMLVDSGGQVVVTNDGVTILKEMDID 77
Query: 359 ------LVELSKAQDIEAGDGTTSVVIVAGSLLEAAEKLLHKGIHPTTISDAFQKAAAKC 412
+VE+S+ Q+ E GDGTT+ VI AG LL+ AE LL +H TTI+ +++AA K
Sbjct: 78 HPAANMIVEVSETQEDEVGDGTTTAVINAGELLDQAEDLLDSDVHATTIAQGYRQAAEKA 137
Query: 413 VEILTEMSTPITLADRENLIKSAATSLNSKVVSQQASLLAPIAVDAVLKVVNPQRDTNVD 472
E+L + + +T DRE L K AAT++ K LL+ + VDAVL V + D +D
Sbjct: 138 KEVLEDNAIEVTEDDRETLTKIAATAMTGKGAESAKDLLSELVVDAVLAV---KDDDGID 194
Query: 473 LKDIKVIRKLGGTVEDTELVDGLVFTQKSANVNGPKRVEKAKIGLIQFCISPPKTDMDHK 532
++ + + +GGT++++ELV+G++ ++ + N P VE A I ++ + +T++D +
Sbjct: 195 TNNVSIEKVVGGTIDNSELVEGVIVDKERVDENMPYAVEDANIAILDDALEVRETEIDAE 254
Query: 533 VVVSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKIKVL 592
V V+D + + L +E + +V Q+ + G + + V D I D+A H+L K +L
Sbjct: 255 VNVTDPDQLQQFLDQEEKQLKEMVDQLVEVGADAVFVG-----DGIDDMAQHYLAKEGIL 309
Query: 593 VVKDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISGIQNPGR 652
V+ + D++ + + R ++SLD + L A V + G + + +++ +
Sbjct: 310 AVRRAKSSDLKRLARATGGRVVSSLDDIEADDLGFAGSVGQKDVGGDERIFVEDVEDA-K 368
Query: 653 TLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYADTVS 712
++T+++RG + V+DE R++ D+L VVR ++ ++ GGGAPE ELSL+L ++AD+V
Sbjct: 369 SVTLILRGGTEHVVDELERAIEDSLGVVRTTLEDGKVLPGGGAPETELSLQLREFADSVG 428
Query: 713 GIDAYCFRALIAGGGAPEIELSLKLTKYADTVSGIDAYCFRAFAQALEVIPLTLAENAGL 772
G R +A AFA+AL++IP TLAENAGL
Sbjct: 429 G------REQLA---------------------------VEAFAEALDIIPRTLAENAGL 455
Query: 773 NPISTVTELRNRHAQGETTTGINVRKGAITNILEENVVQPLLVSTSAITLSTETVRSILK 832
+PI ++ +LR+RH GE G++ G + ++ EE VV+PL V T AI +TE IL+
Sbjct: 456 DPIDSLVDLRSRHDGGEFAAGLDAYTGEVIDMEEEGVVEPLRVKTQAIESATEAAVMILR 515
Query: 833 IDDIV 837
IDD++
Sbjct: 516 IDDVI 520
Score = 183 bits (464), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 97/276 (35%), Positives = 165/276 (59%), Gaps = 6/276 (2%)
Query: 84 MDHKVVVSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDK 143
+D +V V+D + + L +E + +V Q+ + G + + V D I D+A H+L K
Sbjct: 251 IDAEVNVTDPDQLQQFLDQEEKQLKEMVDQLVEVGADAVFVG-----DGIDDMAQHYLAK 305
Query: 144 IKVLVVKDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISGIQ 203
+L V+ + D++ + + R ++SLD + L A V + G + + ++
Sbjct: 306 EGILAVRRAKSSDLKRLARATGGRVVSSLDDIEADDLGFAGSVGQKDVGGDERIFVEDVE 365
Query: 204 NPGRTLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYA 263
+ +++T+++RG + V+DE R++ D+L VVR ++ ++ GGGAPE ELSL+L ++A
Sbjct: 366 DA-KSVTLILRGGTEHVVDELERAIEDSLGVVRTTLEDGKVLPGGGAPETELSLQLREFA 424
Query: 264 DTVSGIDAYCFRAFAQALEVIPLTLAENAGLNPISTVTELRNRHAQGETTTGINVRKGAI 323
D+V G + AFA+AL++IP TLAENAGL+PI ++ +LR+RH GE G++ G +
Sbjct: 425 DSVGGREQLAVEAFAEALDIIPRTLAENAGLDPIDSLVDLRSRHDGGEFAAGLDAYTGEV 484
Query: 324 TNILEENVVQPLLVSTSAITLSTETVRSILKIDDIL 359
++ EE VV+PL V T AI +TE IL+IDD++
Sbjct: 485 IDMEEEGVVEPLRVKTQAIESATEAAVMILRIDDVI 520
Score = 83.6 bits (205), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 51/65 (78%)
Query: 20 KSKATDIRNSNIGAAKAVADAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMNVIHP 79
++ D ++ NI A KAVA+A+RT+LGP+GMDKM+ S G+V +TNDG TILK+M++ HP
Sbjct: 20 RTSGQDAQSMNITAGKAVAEAVRTTLGPKGMDKMLVDSGGQVVVTNDGVTILKEMDIDHP 79
Query: 80 AAKMM 84
AA M+
Sbjct: 80 AANMI 84
>sp|O24732|THSB_THEK8 Thermosome subunit beta OS=Thermococcus sp. (strain KS-8) GN=thsB
PE=3 SV=1
Length = 545
Score = 277 bits (708), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 167/481 (34%), Positives = 270/481 (56%), Gaps = 41/481 (8%)
Query: 358 ILVELSKAQDIEAGDGTTSVVIVAGSLLEAAEKLLHKGIHPTTISDAFQKAAAKCVEILT 417
++VE++K QD EAGDGTT+ V++AG LL AE+LL + IHP+ I + AA K EIL
Sbjct: 81 MMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEKAQEILD 140
Query: 418 EMSTPITLADRENLIKSAATSLNSKVVSQQASLLAPIAVDAVLKVVNPQRD-TNVDLKDI 476
++ + + DRE L K+A T++ K ++ LA IAV+AV +V D +VDL +I
Sbjct: 141 SIARDVDVEDREILKKAAMTAITGKAAEEEREYLAEIAVEAVKQVAEKVGDRYHVDLDNI 200
Query: 477 KVIRKLGGTVEDTELVDGLVFTQKSANVNGPKRVEKAKIGLIQFCISPPKTDMDHKVVVS 536
K +K GG+V+DT+L+ G+V ++ + KRVE AKI LI + +T+ D ++ ++
Sbjct: 201 KFEKKEGGSVKDTQLIKGVVIDKEVVHPGMRKRVEGAKIALINEALEVKETETDAEIRIT 260
Query: 537 DYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKIKVLVVKD 596
+ L++E + +V +IK+ G NV+ VQK I DLA H+L K ++ V+
Sbjct: 261 SPEQLQAFLEQEEKMLREMVDKIKEVGANVVFVQKG-----IDDLAQHYLAKYGIMAVRR 315
Query: 597 IEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISGIQNPGRTLTV 656
+++ D+E + K + + ++ PE L A+LVE+ + + G +NP + +T+
Sbjct: 316 VKKSDMEKLAKATGAKIVTNVRDLTPEDLGEAELVEQRKVAGENMIFVEGCKNP-KAVTI 374
Query: 657 VVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYADTVSGIDA 716
++RG + V+DE R+L DA+ VV+ +V+ ++A GGAPEIEL++ + +Y
Sbjct: 375 LIRGGTEHVVDEVERALEDAVKVVKDIVEDGKIVAAGGAPEIELAISVDEY--------- 425
Query: 717 YCFRALIAGGGAPEIELSLKLTKYADTVSGIDAYCFRAFAQALEVIPLTLAENAGLNPIS 776
A V G + AFA+AL+VIP TLA NAGL+PI
Sbjct: 426 ------------------------AKEVGGKEQLAIEAFAEALKVIPRTLAGNAGLDPIE 461
Query: 777 TVTELRNRHAQGETTTGINVRKGAITNILEENVVQPLLVSTSAITLSTETVRSILKIDDI 836
T+ ++ H + T G++V +G ++LE V+ P+ V AI S + IL+IDD+
Sbjct: 462 TLVKVIAAHKEKGPTIGVDVFEGEPADMLERGVIAPVRVPKQAIK-SAKAAIMILRIDDV 520
Query: 837 V 837
+
Sbjct: 521 I 521
Score = 181 bits (458), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 100/291 (34%), Positives = 168/291 (57%), Gaps = 7/291 (2%)
Query: 85 DHKVVVSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKI 144
D ++ ++ + L++E + +V +IK+ G NV+ VQK I DLA H+L K
Sbjct: 254 DAEIRITSPEQLQAFLEQEEKMLREMVDKIKEVGANVVFVQKGI-----DDLAQHYLAKY 308
Query: 145 KVLVVKDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISGIQN 204
++ V+ +++ D+E + K + + ++ PE L A+LVE+ + + G +N
Sbjct: 309 GIMAVRRVKKSDMEKLAKATGAKIVTNVRDLTPEDLGEAELVEQRKVAGENMIFVEGCKN 368
Query: 205 PGRTLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYAD 264
P + +T+++RG + V+DE R+L DA+ VV+ +V+ ++A GGAPEIEL++ + +YA
Sbjct: 369 P-KAVTILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKIVAAGGAPEIELAISVDEYAK 427
Query: 265 TVSGIDAYCFRAFAQALEVIPLTLAENAGLNPISTVTELRNRHAQGETTTGINVRKGAIT 324
V G + AFA+AL+VIP TLA NAGL+PI T+ ++ H + T G++V +G
Sbjct: 428 EVGGKEQLAIEAFAEALKVIPRTLAGNAGLDPIETLVKVIAAHKEKGPTIGVDVFEGEPA 487
Query: 325 NILEENVVQPLLVSTSAITLSTETVRSILKIDDILVELSKAQDIEAGDGTT 375
++LE V+ P+ V AI S + IL+IDD++ +D E G G T
Sbjct: 488 DMLERGVIAPVRVPKQAIK-SAKAAIMILRIDDVIAASKLEKDKEGGKGGT 537
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 51/73 (69%)
Query: 25 DIRNSNIGAAKAVADAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMNVIHPAAKMM 84
D + NI AA+ +A+ +RT+LGP+GMDKM+ S G++ ITNDGATIL +M++ HPAAKMM
Sbjct: 23 DAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVITNDGATILDEMDIQHPAAKMM 82
Query: 85 DHKVVVSDYSAMD 97
D A D
Sbjct: 83 VEVAKTQDKEAGD 95
>sp|P61112|THSA_THEK1 Thermosome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=thsA
PE=1 SV=1
Length = 548
Score = 276 bits (707), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 169/482 (35%), Positives = 269/482 (55%), Gaps = 42/482 (8%)
Query: 358 ILVELSKAQDIEAGDGTTSVVIVAGSLLEAAEKLLHKGIHPTTISDAFQKAAAKCVEILT 417
++VE++K QD EAGDGTT+ V++AG LL AE+LL + IHP+ I + AA K EIL
Sbjct: 81 MMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEKAQEILD 140
Query: 418 EMSTPITLADRENLIKSAATSLNSKVVSQQASLLAPIAVDAVLKVVNPQRDTN--VDLKD 475
E++ + D E L+K AATS+ K LLA +AV+AV K V ++D VDL +
Sbjct: 141 EIAIRVDPDDEETLLKIAATSITGKNAESHKELLAKLAVEAV-KQVAEKKDGKYVVDLDN 199
Query: 476 IKVIRKLGGTVEDTELVDGLVFTQKSANVNGPKRVEKAKIGLIQFCISPPKTDMDHKVVV 535
IK +K G VE++ELV G+V ++ + PKRVE AKI LI + KT+ D K+ +
Sbjct: 200 IKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVENAKIALINEALEVKKTETDAKINI 259
Query: 536 SDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKIKVLVVK 595
+ + L++E + ++V I + G NV+ VQK I DLA H+L K ++ V+
Sbjct: 260 TSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKG-----IDDLAQHYLAKYGIMAVR 314
Query: 596 DIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISGIQNPGRTLT 655
+++ D+E + K + + ++ PE L A++VEE + + G +NP + +T
Sbjct: 315 RVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKLAGENMIFVEGCKNP-KAVT 373
Query: 656 VVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYADTVSGID 715
+++RG + V+DE R+L DA+ VV+ +++ A++ GGAPEIEL+++L +Y
Sbjct: 374 ILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEY-------- 425
Query: 716 AYCFRALIAGGGAPEIELSLKLTKYADTVSGIDAYCFRAFAQALEVIPLTLAENAGLNPI 775
A V G +A FA AL++IP TLAENAGL+ +
Sbjct: 426 -------------------------AKQVGGKEALAIENFADALKIIPKTLAENAGLDTV 460
Query: 776 STVTELRNRHAQGETTTGINVRKGAITNILEENVVQPLLVSTSAITLSTETVRSILKIDD 835
+ ++ + H GI+V +G ++LE+ +++PL V AI ++E IL+IDD
Sbjct: 461 EMLVKVISEHKNRGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDD 520
Query: 836 IV 837
++
Sbjct: 521 VI 522
Score = 173 bits (439), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 92/275 (33%), Positives = 162/275 (58%), Gaps = 6/275 (2%)
Query: 85 DHKVVVSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKI 144
D K+ ++ + L++E + ++V I + G NV+ VQK I DLA H+L K
Sbjct: 254 DAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGI-----DDLAQHYLAKY 308
Query: 145 KVLVVKDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISGIQN 204
++ V+ +++ D+E + K + + ++ PE L A++VEE + + G +N
Sbjct: 309 GIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKLAGENMIFVEGCKN 368
Query: 205 PGRTLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYAD 264
P + +T+++RG + V+DE R+L DA+ VV+ +++ A++ GGAPEIEL+++L +YA
Sbjct: 369 P-KAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAK 427
Query: 265 TVSGIDAYCFRAFAQALEVIPLTLAENAGLNPISTVTELRNRHAQGETTTGINVRKGAIT 324
V G +A FA AL++IP TLAENAGL+ + + ++ + H GI+V +G
Sbjct: 428 QVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDVFEGKPA 487
Query: 325 NILEENVVQPLLVSTSAITLSTETVRSILKIDDIL 359
++LE+ +++PL V AI ++E IL+IDD++
Sbjct: 488 DMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVI 522
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 51/73 (69%)
Query: 25 DIRNSNIGAAKAVADAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMNVIHPAAKMM 84
D + NI AA+ +A+ +RT+LGP+GMDKM+ S G++ +TNDGATIL ++++ HPAAKMM
Sbjct: 23 DAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDGATILDKIDLQHPAAKMM 82
Query: 85 DHKVVVSDYSAMD 97
D A D
Sbjct: 83 VEVAKTQDKEAGD 95
>sp|P61111|THSA_PYRKO Thermosome subunit alpha OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=thsA PE=3 SV=1
Length = 548
Score = 276 bits (707), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 169/482 (35%), Positives = 269/482 (55%), Gaps = 42/482 (8%)
Query: 358 ILVELSKAQDIEAGDGTTSVVIVAGSLLEAAEKLLHKGIHPTTISDAFQKAAAKCVEILT 417
++VE++K QD EAGDGTT+ V++AG LL AE+LL + IHP+ I + AA K EIL
Sbjct: 81 MMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEKAQEILD 140
Query: 418 EMSTPITLADRENLIKSAATSLNSKVVSQQASLLAPIAVDAVLKVVNPQRDTN--VDLKD 475
E++ + D E L+K AATS+ K LLA +AV+AV K V ++D VDL +
Sbjct: 141 EIAIRVDPDDEETLLKIAATSITGKNAESHKELLAKLAVEAV-KQVAEKKDGKYVVDLDN 199
Query: 476 IKVIRKLGGTVEDTELVDGLVFTQKSANVNGPKRVEKAKIGLIQFCISPPKTDMDHKVVV 535
IK +K G VE++ELV G+V ++ + PKRVE AKI LI + KT+ D K+ +
Sbjct: 200 IKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVENAKIALINEALEVKKTETDAKINI 259
Query: 536 SDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKIKVLVVK 595
+ + L++E + ++V I + G NV+ VQK I DLA H+L K ++ V+
Sbjct: 260 TSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKG-----IDDLAQHYLAKYGIMAVR 314
Query: 596 DIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISGIQNPGRTLT 655
+++ D+E + K + + ++ PE L A++VEE + + G +NP + +T
Sbjct: 315 RVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKLAGENMIFVEGCKNP-KAVT 373
Query: 656 VVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYADTVSGID 715
+++RG + V+DE R+L DA+ VV+ +++ A++ GGAPEIEL+++L +Y
Sbjct: 374 ILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEY-------- 425
Query: 716 AYCFRALIAGGGAPEIELSLKLTKYADTVSGIDAYCFRAFAQALEVIPLTLAENAGLNPI 775
A V G +A FA AL++IP TLAENAGL+ +
Sbjct: 426 -------------------------AKQVGGKEALAIENFADALKIIPKTLAENAGLDTV 460
Query: 776 STVTELRNRHAQGETTTGINVRKGAITNILEENVVQPLLVSTSAITLSTETVRSILKIDD 835
+ ++ + H GI+V +G ++LE+ +++PL V AI ++E IL+IDD
Sbjct: 461 EMLVKVISEHKNRGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDD 520
Query: 836 IV 837
++
Sbjct: 521 VI 522
Score = 173 bits (439), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 92/275 (33%), Positives = 162/275 (58%), Gaps = 6/275 (2%)
Query: 85 DHKVVVSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKI 144
D K+ ++ + L++E + ++V I + G NV+ VQK I DLA H+L K
Sbjct: 254 DAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGI-----DDLAQHYLAKY 308
Query: 145 KVLVVKDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISGIQN 204
++ V+ +++ D+E + K + + ++ PE L A++VEE + + G +N
Sbjct: 309 GIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKLAGENMIFVEGCKN 368
Query: 205 PGRTLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYAD 264
P + +T+++RG + V+DE R+L DA+ VV+ +++ A++ GGAPEIEL+++L +YA
Sbjct: 369 P-KAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAK 427
Query: 265 TVSGIDAYCFRAFAQALEVIPLTLAENAGLNPISTVTELRNRHAQGETTTGINVRKGAIT 324
V G +A FA AL++IP TLAENAGL+ + + ++ + H GI+V +G
Sbjct: 428 QVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDVFEGKPA 487
Query: 325 NILEENVVQPLLVSTSAITLSTETVRSILKIDDIL 359
++LE+ +++PL V AI ++E IL+IDD++
Sbjct: 488 DMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVI 522
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 51/73 (69%)
Query: 25 DIRNSNIGAAKAVADAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMNVIHPAAKMM 84
D + NI AA+ +A+ +RT+LGP+GMDKM+ S G++ +TNDGATIL ++++ HPAAKMM
Sbjct: 23 DAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDGATILDKIDLQHPAAKMM 82
Query: 85 DHKVVVSDYSAMD 97
D A D
Sbjct: 83 VEVAKTQDKEAGD 95
>sp|O93624|THS_METTL Thermosome subunit OS=Methanococcus thermolithotrophicus GN=ths
PE=1 SV=1
Length = 544
Score = 276 bits (705), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 166/481 (34%), Positives = 271/481 (56%), Gaps = 42/481 (8%)
Query: 358 ILVELSKAQDIEAGDGTTSVVIVAGSLLEAAEKLLHKGIHPTTISDAFQKAAAKCVEILT 417
+L+E++K Q+ E GDGTT+ V++AG LL AE+LL + +HPT + +Q A K E+L
Sbjct: 79 MLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNVHPTIVIKGYQLAVQKAQEVLK 138
Query: 418 EMSTPITLADRENLIKSAATSLNSKVVSQQASLLAPIAVDAVLKVVNPQRDTNVDLKDIK 477
E++ + D+E L K A TS+ K + L + V+AV VV+ + DL IK
Sbjct: 139 EIAMDVKADDKEILHKIAMTSITGKGAEKAKEKLGEMIVEAVTAVVDESGKVDKDL--IK 196
Query: 478 VIRKLGGTVEDTELVDGLVFTQKSANVNGPKRVEKAKIGLIQFCISPPKTDMDHKVVVSD 537
+ +K G +V++TEL++G++ ++ + PK++E AKI L+ I +T+ D ++ ++D
Sbjct: 197 IEKKEGASVDETELINGVLIDKERVSPQMPKKIENAKIALLNCPIEVKETETDAEIRITD 256
Query: 538 YSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKIKVLVVKDI 597
+ + +++E + ++V IK +G NVL QK I DLA H+L K +L V+ +
Sbjct: 257 PTKLMEFIEQEEKMLKDMVDTIKASGANVLFCQK-----GIDDLAQHYLAKEGILAVRRV 311
Query: 598 EREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISGIQNPGRTLTVV 657
++ D+E + K + ++ E L A +VEE + + ++P + +T++
Sbjct: 312 KKSDMEKLSKATGANVVTNIKDLKAEDLGEAGIVEERKIAGDAMIFVEECKHP-KAVTML 370
Query: 658 VRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYADTVSGIDAY 717
+RG+ + V++E AR++ DA+ VV C ++ ++AGGGA EIEL++KL YA+ VSG
Sbjct: 371 IRGTTEHVIEEVARAVDDAIGVVACTIEDGKIVAGGGAAEIELAMKLRDYAEGVSG---- 426
Query: 718 CFRALIAGGGAPEIELSLKLTKYADTVSGIDAYCFRAFAQALEVIPLTLAENAGLNPIST 777
R +A RAFA ALEV+P TLAENAGL+ I
Sbjct: 427 --REQLA---------------------------VRAFADALEVVPRTLAENAGLDAIEM 457
Query: 778 VTELRNRHAQGETT-TGINVRKGAITNILEENVVQPLLVSTSAITLSTETVRSILKIDDI 836
+ +LR +HA+G G+NV G + N+ E VV+PL V T AI +TE +L+IDD+
Sbjct: 458 LVKLRAKHAEGNNAYYGLNVFTGDVENMTENGVVEPLRVKTQAIQSATEATEMLLRIDDV 517
Query: 837 V 837
+
Sbjct: 518 I 518
Score = 188 bits (477), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 102/276 (36%), Positives = 166/276 (60%), Gaps = 7/276 (2%)
Query: 85 DHKVVVSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKI 144
D ++ ++D + + +++E + ++V IK +G NVL QK I DLA H+L K
Sbjct: 249 DAEIRITDPTKLMEFIEQEEKMLKDMVDTIKASGANVLFCQKGI-----DDLAQHYLAKE 303
Query: 145 KVLVVKDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISGIQN 204
+L V+ +++ D+E + K + ++ E L A +VEE + + ++
Sbjct: 304 GILAVRRVKKSDMEKLSKATGANVVTNIKDLKAEDLGEAGIVEERKIAGDAMIFVEECKH 363
Query: 205 PGRTLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYAD 264
P + +T+++RG+ + V++E AR++ DA+ VV C ++ ++AGGGA EIEL++KL YA+
Sbjct: 364 P-KAVTMLIRGTTEHVIEEVARAVDDAIGVVACTIEDGKIVAGGGAAEIELAMKLRDYAE 422
Query: 265 TVSGIDAYCFRAFAQALEVIPLTLAENAGLNPISTVTELRNRHAQGETT-TGINVRKGAI 323
VSG + RAFA ALEV+P TLAENAGL+ I + +LR +HA+G G+NV G +
Sbjct: 423 GVSGREQLAVRAFADALEVVPRTLAENAGLDAIEMLVKLRAKHAEGNNAYYGLNVFTGDV 482
Query: 324 TNILEENVVQPLLVSTSAITLSTETVRSILKIDDIL 359
N+ E VV+PL V T AI +TE +L+IDD++
Sbjct: 483 ENMTENGVVEPLRVKTQAIQSATEATEMLLRIDDVI 518
Score = 70.9 bits (172), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 45/60 (75%)
Query: 25 DIRNSNIGAAKAVADAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMNVIHPAAKMM 84
D + NI A + + + +R++LGP+GMDKM+ G++ +TNDG TILK+M+V HPAAKM+
Sbjct: 21 DAQRMNILAGRIIGETVRSTLGPKGMDKMLVDDLGDIVVTNDGVTILKEMSVEHPAAKML 80
>sp|Q68FQ0|TCPE_RAT T-complex protein 1 subunit epsilon OS=Rattus norvegicus GN=Cct5
PE=1 SV=1
Length = 541
Score = 273 bits (698), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 179/507 (35%), Positives = 280/507 (55%), Gaps = 55/507 (10%)
Query: 342 ITLSTETVRSILKIDD----ILVELSKAQDIEAGDGTTSVVIVAGSLLEAAEKLLHKGIH 397
+T T+ S++ +D ++VELSK+QD E GDGTT VV++AG+LLE AE+LL +GIH
Sbjct: 70 VTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIH 129
Query: 398 PTTISDAFQKAAAKCVEILTEMSTP--ITLADRENLIKSAATSLNSKVVSQQASLLAPIA 455
P I+D +++AA ++ L ++S + + + E LI++A T+L SKVV+ +A IA
Sbjct: 130 PIRIADGYEQAARIAIQHLDKISDNVLVDINNPEPLIQTAKTTLGSKVVNSCHRQMAEIA 189
Query: 456 VDAVLKVVNPQRDTNVDLKDIKVIRKLGGTVEDTELVDGLVFTQKSANVNGPKRVEKAKI 515
V+AVL V + +R +VD + IKV K+GG +EDT+L+ G++ + ++ PK V AKI
Sbjct: 190 VNAVLTVADMER-RDVDFELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPQMPKEVLNAKI 248
Query: 516 GLIQFCISPPKTDMDHKV---VVSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKS 572
++ PPK HK+ V DY A+ + KE+ ++ QIK+ G N+ + Q
Sbjct: 249 AILTCPFEPPKPKTKHKLDVTSVEDYKALQKYEKEK---FEEMIAQIKETGANLAICQW- 304
Query: 573 ILRDAISDLAIHFLDKIKVLVVKDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVE 632
D A H L + + V+ + +IE + R + E L A +V
Sbjct: 305 ----GFDDEANHLLLQNGLPAVRWVGGPEIELIAIATGGRIVPRFSELTSEKLGFAGVVR 360
Query: 633 EIPAGNS--RFVKISGIQNPGRTLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALI 690
EI G + + + I +N R +T+ +RG NK++++EA RSLHDALCV+R L++ ++
Sbjct: 361 EISFGTTKDKMLVIEQCKN-SRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVV 419
Query: 691 AGGGAPEIELSLKLTKYADTVSGIDAYCFRALIAGGGAPEIELSLKLTKYADTVSGIDAY 750
GGGA EI +L +++ AD P +E Y
Sbjct: 420 YGGGAAEISCALAVSQEADK-----------------CPTLE----------------QY 446
Query: 751 CFRAFAQALEVIPLTLAENAGLNPISTVTELRNRHA-QGETTTGINVRKGAITNILEENV 809
RAFA ALEVIP+ L+EN+G+NPI T+TE+R R + GI+ ++ ++V
Sbjct: 447 AMRAFADALEVIPMALSENSGMNPIQTMTEVRARQVKESNPALGIDCLHKGSNDMQYQHV 506
Query: 810 VQPLLVSTSAITLSTETVRSILKIDDI 836
++ L+ I+L+T+ VR ILKIDDI
Sbjct: 507 IETLIGKKQQISLATQMVRMILKIDDI 533
Score = 164 bits (416), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/272 (35%), Positives = 152/272 (55%), Gaps = 12/272 (4%)
Query: 90 VSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKIKVLVV 149
V DY A+ + KE+ ++ QIK+ G N+ + Q D A H L + + V
Sbjct: 271 VEDYKALQKYEKEK---FEEMIAQIKETGANLAICQW-----GFDDEANHLLLQNGLPAV 322
Query: 150 KDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNS--RFVKISGIQNPGR 207
+ + +IE + R + E L A +V EI G + + + I +N R
Sbjct: 323 RWVGGPEIELIAIATGGRIVPRFSELTSEKLGFAGVVREISFGTTKDKMLVIEQCKN-SR 381
Query: 208 TLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYADTVS 267
+T+ +RG NK++++EA RSLHDALCV+R L++ ++ GGGA EI +L +++ AD
Sbjct: 382 AVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKCP 441
Query: 268 GIDAYCFRAFAQALEVIPLTLAENAGLNPISTVTELRNRHA-QGETTTGINVRKGAITNI 326
++ Y RAFA ALEVIP+ L+EN+G+NPI T+TE+R R + GI+ ++
Sbjct: 442 TLEQYAMRAFADALEVIPMALSENSGMNPIQTMTEVRARQVKESNPALGIDCLHKGSNDM 501
Query: 327 LEENVVQPLLVSTSAITLSTETVRSILKIDDI 358
++V++ L+ I+L+T+ VR ILKIDDI
Sbjct: 502 QYQHVIETLIGKKQQISLATQMVRMILKIDDI 533
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 45/56 (80%)
Query: 29 SNIGAAKAVADAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMNVIHPAAKMM 84
S+I AAKAVA+ +RTSLGP G+DKM+ +G+VT+TNDGATIL M+V H AK+M
Sbjct: 36 SHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLM 91
>sp|Q9YA66|THSB_AERPE Thermosome subunit beta OS=Aeropyrum pernix (strain ATCC 700893 /
DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=thsB PE=3
SV=2
Length = 548
Score = 271 bits (692), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 167/489 (34%), Positives = 275/489 (56%), Gaps = 55/489 (11%)
Query: 358 ILVELSKAQDIEAGDGTTSVVIVAGSLLEAAEKLLHKGIHPTTISDAFQKAAAKCVEILT 417
+LV++SK Q+ EAGDGT + VI AG LL+ AEKLL IHPT I + +++A K E++
Sbjct: 88 MLVQISKGQEDEAGDGTKTTVIFAGELLKEAEKLLDINIHPTIIVEGYKEALRKASEVIE 147
Query: 418 EMSTPITLADRENLIKSAATSLNSKVVSQQASLLAPIAVDAVLKVVNPQRD-TNVDLKDI 476
++ P++ D E L A TSLNSK V++ A +AV+AV V + D VDL +I
Sbjct: 148 SIAEPVSYDDVEKLKLIAKTSLNSKAVAEARDYFAELAVEAVRTVAERRGDRWYVDLNNI 207
Query: 477 KVIRKLGGTVEDTELVDGLVFTQKSANVNGPKRVEKAKIGLIQFCISPPKTDMDHKVVVS 536
++++K GG++ DT LV G+V ++ + + P+RVE A+I L+ + K ++D ++ ++
Sbjct: 208 QIVKKHGGSLRDTRLVRGIVLDKEVVHPDMPRRVENARIALLDTPLEIEKPEIDLEISIT 267
Query: 537 D-------YSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKI 589
Y +R+L+E+ +++I G NV++ QK I D+A HFL K
Sbjct: 268 SPEQIKALYEKQERILQEK-------IEKIAATGANVVITQK-----GIDDVAQHFLAKK 315
Query: 590 KVLVVKDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISGIQN 649
+L V+ ++R DIE + + R + ++ PE L A+LVEE G + V I G +N
Sbjct: 316 GILAVRRVKRSDIEKIARATGARIVTDIEDLRPEDLGYAELVEERKVGEDKMVFIEGAKN 375
Query: 650 PGRTLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYAD 709
P +++T+++RG + ++DEA RSLHDAL VV + ++AGGGA E E++ L +YA
Sbjct: 376 P-KSVTILLRGGFERLVDEAERSLHDALSVVADAIMDGKIVAGGGAVEAEVAKVLYEYAS 434
Query: 710 TVSGIDAYCFRALIAGGGAPEIELSLKLTKYADTVSGIDAYCFRAFAQALEVIPLTLAEN 769
+ G + +L+++ AFA+A+E +P LA N
Sbjct: 435 KLPG----------------KTQLAVE-----------------AFARAVEALPQALAHN 461
Query: 770 AGLNPISTVTELRNRHAQGETTT-GINVRKGAITNILEENVVQPLLVSTSAITLSTETVR 828
AG +PI + +LR+ H + E G+++ G I ++ V++P+ V +A+ +TE
Sbjct: 462 AGHDPIEVLVKLRSAHEKPENKWYGVDLDTGEIVDMWSRGVLEPMRVKLNALKAATEVAS 521
Query: 829 SILKIDDIV 837
IL+IDD++
Sbjct: 522 LILRIDDVI 530
Score = 170 bits (430), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 95/268 (35%), Positives = 155/268 (57%), Gaps = 14/268 (5%)
Query: 93 YSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKIKVLVVKDI 152
Y +R+L+E+ +++I G NV++ QK I D+A HFL K +L V+ +
Sbjct: 276 YEKQERILQEK-------IEKIAATGANVVITQK-----GIDDVAQHFLAKKGILAVRRV 323
Query: 153 EREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISGIQNPGRTLTVV 212
+R DIE + + R + ++ PE L A+LVEE G + V I G +NP +++T++
Sbjct: 324 KRSDIEKIARATGARIVTDIEDLRPEDLGYAELVEERKVGEDKMVFIEGAKNP-KSVTIL 382
Query: 213 VRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYADTVSGIDAY 272
+RG + ++DEA RSLHDAL VV + ++AGGGA E E++ L +YA + G
Sbjct: 383 LRGGFERLVDEAERSLHDALSVVADAIMDGKIVAGGGAVEAEVAKVLYEYASKLPGKTQL 442
Query: 273 CFRAFAQALEVIPLTLAENAGLNPISTVTELRNRHAQGETTT-GINVRKGAITNILEENV 331
AFA+A+E +P LA NAG +PI + +LR+ H + E G+++ G I ++ V
Sbjct: 443 AVEAFARAVEALPQALAHNAGHDPIEVLVKLRSAHEKPENKWYGVDLDTGEIVDMWSRGV 502
Query: 332 VQPLLVSTSAITLSTETVRSILKIDDIL 359
++P+ V +A+ +TE IL+IDD++
Sbjct: 503 LEPMRVKLNALKAATEVASLILRIDDVI 530
Score = 73.6 bits (179), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 49/65 (75%)
Query: 20 KSKATDIRNSNIGAAKAVADAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMNVIHP 79
+S + +NI A +A+A ++T+ GP+GMDKM+ S G++TITN+GATIL +M+V HP
Sbjct: 25 RSYGREALRANIMAVRAIAQILKTTYGPKGMDKMLVDSLGDITITNNGATILDKMDVAHP 84
Query: 80 AAKMM 84
AAKM+
Sbjct: 85 AAKML 89
>sp|O26885|THSB_METTH Thermosome subunit beta OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=thsB PE=3 SV=1
Length = 538
Score = 268 bits (685), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 188/558 (33%), Positives = 297/558 (53%), Gaps = 60/558 (10%)
Query: 293 GLNPISTVTELRNRHAQGETTTGINVRKGAI------TNILEENVVQPLLVSTSAITLST 346
G PI + E +R+ G +N+ G I T + + + + L+ S I ++
Sbjct: 4 GQQPILVLPEGTSRYL-GRDAQRMNILAGKILAETVRTTLGPKGMDKMLVDSLGDIVVTN 62
Query: 347 ETVRSILKIDDI-------LVELSKAQDIEAGDGTTSVVIVAGSLLEAAEKLLHKGIHPT 399
+ V +ILK DI LVE++K Q+ E GDGTT+ VI+AG LL+ AE LL IHPT
Sbjct: 63 DGV-TILKEMDIEHPAAKMLVEVAKTQEDEVGDGTTTAVIIAGELLKKAENLLEMEIHPT 121
Query: 400 TISDAFQKAAAKCVEILTEMSTPITLADRENLIKSAATSLNSKVVSQQASLLAPIAVDAV 459
I+ +++AA K EIL +++ I +DR+ L+K A T++ K + LA + VDAV
Sbjct: 122 IIAMGYRQAAEKAQEILDDIA--IDASDRDTLMKVAMTAMTGKGTEKAREPLAELIVDAV 179
Query: 460 LKVVNPQRDTNVDLKDIKVIRKLGGTVEDTELVDGLVFTQKSANVNGPKRVEKAKIGLIQ 519
+V + D V+ IK+ +K G V+D+ LV G++ ++ + PK+VE AKI L+
Sbjct: 180 KQV---EEDGEVEKDHIKIEKKEGAAVDDSTLVQGVIIDKERVHPGMPKKVENAKIALLN 236
Query: 520 FCISPPKTDMDHKVVVSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAIS 579
I +T++D ++ ++D S M +++E I ++V I G NVL QK I
Sbjct: 237 CPIEVKETEVDAEIRITDPSQMQAFIEQEEQMIRDMVNSIVDTGANVLFCQK-----GID 291
Query: 580 DLAIHFLDKIKVLVVKDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNS 639
DLA H+L K VL V+ +++ D+E + K + +++ PE L A +V E
Sbjct: 292 DLAQHYLAKAGVLAVRRVKKSDMEKLSKATGANIVTNIEDLSPEDLGEAGVVSEKKISGE 351
Query: 640 RFVKISGIQNPGRTLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIE 699
+ + + P + +T++VRGS + V+ E R++ DA+ VV V+ ++AGGGAPEIE
Sbjct: 352 EMIFVEECKEP-KAVTILVRGSTEHVVSEVERAIEDAIGVVAATVEDGKVVAGGGAPEIE 410
Query: 700 LSLKLTKYADTVSGIDAYCFRALIAGGGAPEIELSLKLTKYADTVSGIDAYCFRAFAQAL 759
++ +L YAD++SG R +A AFA+AL
Sbjct: 411 IAKRLKDYADSISG------REQLA---------------------------VSAFAEAL 437
Query: 760 EVIPLTLAENAGLNPISTVTELRNRHAQGETTTGINVRKGAITNILEENVVQPLLVSTSA 819
E++P TLAENAGL+ I + +LR H + T GI+V G I ++ E V++P V A
Sbjct: 438 EIVPKTLAENAGLDSIDVLVDLRAAHEES-TYMGIDVFDGKIVDMKEAGVIEPHRVKKQA 496
Query: 820 ITLSTETVRSILKIDDIV 837
I + E IL+IDD++
Sbjct: 497 IQSAAEAAEMILRIDDVI 514
Score = 177 bits (448), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 99/276 (35%), Positives = 158/276 (57%), Gaps = 7/276 (2%)
Query: 84 MDHKVVVSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDK 143
+D ++ ++D S M +++E I ++V I G NVL QK I DLA H+L K
Sbjct: 246 VDAEIRITDPSQMQAFIEQEEQMIRDMVNSIVDTGANVLFCQK-----GIDDLAQHYLAK 300
Query: 144 IKVLVVKDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISGIQ 203
VL V+ +++ D+E + K + +++ PE L A +V E + + +
Sbjct: 301 AGVLAVRRVKKSDMEKLSKATGANIVTNIEDLSPEDLGEAGVVSEKKISGEEMIFVEECK 360
Query: 204 NPGRTLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYA 263
P + +T++VRGS + V+ E R++ DA+ VV V+ ++AGGGAPEIE++ +L YA
Sbjct: 361 EP-KAVTILVRGSTEHVVSEVERAIEDAIGVVAATVEDGKVVAGGGAPEIEIAKRLKDYA 419
Query: 264 DTVSGIDAYCFRAFAQALEVIPLTLAENAGLNPISTVTELRNRHAQGETTTGINVRKGAI 323
D++SG + AFA+ALE++P TLAENAGL+ I + +LR H + T GI+V G I
Sbjct: 420 DSISGREQLAVSAFAEALEIVPKTLAENAGLDSIDVLVDLRAAHEES-TYMGIDVFDGKI 478
Query: 324 TNILEENVVQPLLVSTSAITLSTETVRSILKIDDIL 359
++ E V++P V AI + E IL+IDD++
Sbjct: 479 VDMKEAGVIEPHRVKKQAIQSAAEAAEMILRIDDVI 514
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 47/60 (78%)
Query: 25 DIRNSNIGAAKAVADAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMNVIHPAAKMM 84
D + NI A K +A+ +RT+LGP+GMDKM+ S G++ +TNDG TILK+M++ HPAAKM+
Sbjct: 22 DAQRMNILAGKILAETVRTTLGPKGMDKMLVDSLGDIVVTNDGVTILKEMDIEHPAAKML 81
>sp|Q9V2T3|THSB_DESMO Thermosome subunit beta (Fragment) OS=Desulfurococcus mobilis
GN=thsB PE=3 SV=1
Length = 502
Score = 268 bits (685), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 169/477 (35%), Positives = 266/477 (55%), Gaps = 41/477 (8%)
Query: 358 ILVELSKAQDIEAGDGTTSVVIVAGSLLEAAEKLLHKGIHPTTISDAFQKAAAKCVEILT 417
+LV+++K+QD E GDGT VI+AG LL+ AE+LL K IHPT I ++ A + ++IL
Sbjct: 65 MLVQVAKSQDSEVGDGTKRAVILAGELLKYAEELLDKNIHPTVIISGYRMAMEEALKILD 124
Query: 418 EMSTPITLADRENLIKSAATSLNSKVVSQQASLLAPIAVDAVLKVVNPQRDTN-VDLKDI 476
+M+ PI L + E L K A TSL SK V A IAV AV +VV + D N VDL +I
Sbjct: 125 QMAEPIDLNNEELLRKVARTSLTSKAVHDAREFFADIAVKAVKQVVEKRGDKNYVDLDNI 184
Query: 477 KVIRKLGGTVEDTELVDGLVFTQKSANVNGPKRVEKAKIGLIQFCISPPKTDMDHKVVVS 536
++I+K GG + D+ LV G+V ++ + P+RVE AKI L+ + K ++D ++ ++
Sbjct: 185 QIIKKYGGALLDSMLVYGIVLDKEVVHPGMPRRVENAKIVLLDAPLEIEKPEIDAEIRIN 244
Query: 537 DYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKIKVLVVKD 596
D +++ L++E ++ +V +I G NV++ QK I ++A HFL K +L V+
Sbjct: 245 DPEQLEKFLQQEEEILMKMVDKIASVGANVVVCQK-----GIDEVAQHFLAKKGILAVRR 299
Query: 597 IEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISGIQNPGRTLTV 656
++R D+E + + R +++++ PE L A LVEE G + V I G +NP R++++
Sbjct: 300 VKRSDLEKLERATGGRIVSNIEDLTPEDLGYAALVEERKVGEDKMVFIEGCKNP-RSVSI 358
Query: 657 VVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYADTVSGIDA 716
V+RG + ++DEA RS+ DAL V DA
Sbjct: 359 VIRGGLERLVDEAERSIRDALSAV---------------------------------ADA 385
Query: 717 YCFRALIAGGGAPEIELSLKLTKYADTVSGIDAYCFRAFAQALEVIPLTLAENAGLNPIS 776
+I GGGA EIEL+ + + A V G + AFA+ALE + +TL ENAGL+PI
Sbjct: 386 LRDGKVIPGGGAAEIELAKHIRRLATRVGGKEQLAIEAFAKALEGLAVTLVENAGLDPID 445
Query: 777 TVTELRNRHAQGETTT-GINVRKGAITNILEENVVQPLLVSTSAITLSTETVRSILK 832
V +LR H + + I++ G + N+ E+ V++P+ + +AI TE I++
Sbjct: 446 MVMKLRAAHEREDGKYLSIDLATGDLVNMREKGVIEPVSILANAIKAGTEAATIIMR 502
Score = 161 bits (407), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 92/272 (33%), Positives = 159/272 (58%), Gaps = 7/272 (2%)
Query: 84 MDHKVVVSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDK 143
+D ++ ++D +++ L++E ++ +V +I G NV++ QK I ++A HFL K
Sbjct: 237 IDAEIRINDPEQLEKFLQQEEEILMKMVDKIASVGANVVVCQK-----GIDEVAQHFLAK 291
Query: 144 IKVLVVKDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISGIQ 203
+L V+ ++R D+E + + R +++++ PE L A LVEE G + V I G +
Sbjct: 292 KGILAVRRVKRSDLEKLERATGGRIVSNIEDLTPEDLGYAALVEERKVGEDKMVFIEGCK 351
Query: 204 NPGRTLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYA 263
NP R++++V+RG + ++DEA RS+ DAL V ++ +I GGGA EIEL+ + + A
Sbjct: 352 NP-RSVSIVIRGGLERLVDEAERSIRDALSAVADALRDGKVIPGGGAAEIELAKHIRRLA 410
Query: 264 DTVSGIDAYCFRAFAQALEVIPLTLAENAGLNPISTVTELRNRHAQGETTT-GINVRKGA 322
V G + AFA+ALE + +TL ENAGL+PI V +LR H + + I++ G
Sbjct: 411 TRVGGKEQLAIEAFAKALEGLAVTLVENAGLDPIDMVMKLRAAHEREDGKYLSIDLATGD 470
Query: 323 ITNILEENVVQPLLVSTSAITLSTETVRSILK 354
+ N+ E+ V++P+ + +AI TE I++
Sbjct: 471 LVNMREKGVIEPVSILANAIKAGTEAATIIMR 502
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 49/65 (75%)
Query: 20 KSKATDIRNSNIGAAKAVADAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMNVIHP 79
++ D +NI AA+A+++ I+T+ GP+GMDKM+ + G+VTITNDGATIL + + HP
Sbjct: 2 RTTGRDALRTNILAARAISEMIKTTYGPKGMDKMLVDALGDVTITNDGATILDKAEIQHP 61
Query: 80 AAKMM 84
AAKM+
Sbjct: 62 AAKML 66
>sp|O24731|THSA_THEK8 Thermosome subunit alpha OS=Thermococcus sp. (strain KS-8) GN=thsA
PE=3 SV=1
Length = 549
Score = 266 bits (681), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 167/482 (34%), Positives = 263/482 (54%), Gaps = 43/482 (8%)
Query: 358 ILVELSKAQDIEAGDGTTSVVIVAGSLLEAAEKLLHKGIHPTTISDAFQKAAAKCVEILT 417
++VE++K QD EAGDGTT+ V++AG LL AE+LL + IHP+ I + AA K EIL
Sbjct: 81 MMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEKAQEILE 140
Query: 418 EMSTPITLADRENLIKSAATSLNSKVVSQQASLLAPIAVDAVLKVVNPQRDTN--VDLKD 475
E++ + D E L++ A TS+ K LLA +AVDAV K V ++D VDL +
Sbjct: 141 EIAIKVNPDDEETLLRIAMTSITGKNAESHKELLAKLAVDAV-KQVAEKKDGKYVVDLDN 199
Query: 476 IKVIRKLGGTVEDTELVDGLVFTQKSANVNGPKRVEKAKIGLIQFCISPPKTDMDHKVVV 535
IK +K G VE++ELV G+V ++ + PKRVE AKI LI + KT+ D K+ +
Sbjct: 200 IKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVEGAKIALINEALEVKKTETDAKINI 259
Query: 536 SDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKIKVLVVK 595
+ + L++E + ++V I + G NV+ VQK I DLA H+L K ++ V+
Sbjct: 260 TSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQK-----GIDDLAQHYLAKYGIMAVR 314
Query: 596 DIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISGIQNPGRTLT 655
+++ D+E + K + + ++ PE L A++VEE + + G +NP + +T
Sbjct: 315 RVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEIVEERKLAGENMIFVEGCKNP-KAVT 373
Query: 656 VVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYADTVSGID 715
+++RG + V+DE R+L DA+ VV+ +++ A++ GGAPEIEL++ + +Y
Sbjct: 374 ILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAISVDEY-------- 425
Query: 716 AYCFRALIAGGGAPEIELSLKLTKYADTVSGIDAYCFRAFAQALEVIPLTLAENAGLNPI 775
A V G +A FA AL++IP TLAENAGL+ +
Sbjct: 426 -------------------------AKQVGGKEALAIENFADALKIIPKTLAENAGLDTV 460
Query: 776 STVTELRNRHAQGETTTGINVRKGAITNILEENVVQPLLVSTSAITLSTETVRSILKIDD 835
+ ++ + H GI+V G ++LE ++ PL V+ AI S IL+IDD
Sbjct: 461 EILVKVISEHKNKGLGIGIDVFAGEPADMLERGIIAPLRVTKQAIK-SARAAIMILRIDD 519
Query: 836 IV 837
++
Sbjct: 520 VI 521
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 91/275 (33%), Positives = 157/275 (57%), Gaps = 7/275 (2%)
Query: 85 DHKVVVSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKI 144
D K+ ++ + L++E + ++V I + G NV+ VQK I DLA H+L K
Sbjct: 254 DAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGI-----DDLAQHYLAKY 308
Query: 145 KVLVVKDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISGIQN 204
++ V+ +++ D+E + K + + ++ PE L A++VEE + + G +N
Sbjct: 309 GIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEIVEERKLAGENMIFVEGCKN 368
Query: 205 PGRTLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYAD 264
P + +T+++RG + V+DE R+L DA+ VV+ +++ A++ GGAPEIEL++ + +YA
Sbjct: 369 P-KAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAISVDEYAK 427
Query: 265 TVSGIDAYCFRAFAQALEVIPLTLAENAGLNPISTVTELRNRHAQGETTTGINVRKGAIT 324
V G +A FA AL++IP TLAENAGL+ + + ++ + H GI+V G
Sbjct: 428 QVGGKEALAIENFADALKIIPKTLAENAGLDTVEILVKVISEHKNKGLGIGIDVFAGEPA 487
Query: 325 NILEENVVQPLLVSTSAITLSTETVRSILKIDDIL 359
++LE ++ PL V+ AI S IL+IDD++
Sbjct: 488 DMLERGIIAPLRVTKQAIK-SARAAIMILRIDDVI 521
Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 51/73 (69%)
Query: 25 DIRNSNIGAAKAVADAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMNVIHPAAKMM 84
D + NI AA+ +A+ +RT+LGP+GMDKM+ S G++ +TNDGATIL ++++ HPAAKMM
Sbjct: 23 DAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDGATILDKIDLQHPAAKMM 82
Query: 85 DHKVVVSDYSAMD 97
D A D
Sbjct: 83 VEVAKTQDKEAGD 95
>sp|P54411|TCPE2_AVESA T-complex protein 1 subunit epsilon OS=Avena sativa PE=2 SV=1
Length = 535
Score = 265 bits (676), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 170/506 (33%), Positives = 271/506 (53%), Gaps = 51/506 (10%)
Query: 342 ITLSTETVRSILKIDD----ILVELSKAQDIEAGDGTTSVVIVAGSLLEAAEKLLHKGIH 397
IT T+ ++ +D+ ++VELS++QD + GDGTT VV++AGSLLE AEKLL +GIH
Sbjct: 66 ITNDGATILELMDVDNQIAKLMVELSRSQDYDIGDGTTGVVVMAGSLLEQAEKLLERGIH 125
Query: 398 PTTISDAFQKAAAKCVEILTEMSTPITLA--DRENLIKSAATSLNSKVVSQQASLLAPIA 455
P +++ ++ A+ V+ L +ST + D E L+++ T+L+SK+VS+ LA IA
Sbjct: 126 PIRVAEGYEMASRIAVDHLESISTKYEFSATDIEPLVQTCMTTLSSKIVSRCKRALAEIA 185
Query: 456 VDAVLKVVNPQR-DTNVDLKDIKVIRKLGGTVEDTELVDGLVFTQKSANVNGPKRVEKAK 514
V AVL V + +R D N+DL IKV K+GG +EDTELV G++ + ++ PKR+E A
Sbjct: 186 VKAVLAVADLERKDVNLDL--IKVEGKVGGKLEDTELVQGIIVDKDMSHPQMPKRIEDAH 243
Query: 515 IGLIQFCISPPKTDMDHKVVVSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSIL 574
I ++ PPK HKV + + +E+ Y +V++ K G +++ Q
Sbjct: 244 IAILTCPFEPPKPKTKHKVDIDTVEKFQTLRGQEQKYFDEMVQKCKDVGATLVICQW--- 300
Query: 575 RDAISDLAIHFLDKIKVLVVKDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEI 634
D A H L + ++ V+ + ++E + R + E L A LV E
Sbjct: 301 --GFDDEANHLLMQRELPAVRWVGGVELELIAIATGGRIVPRFQELSTEKLGKAGLVREK 358
Query: 635 PAGNS--RFVKISGIQNPGRTLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAG 692
G + R + I N + +T+ +RG NK++++E RS+HDALCV R L+ +++ G
Sbjct: 359 SFGTTKDRMLYIEKCAN-SKAVTIFIRGGNKMMIEETKRSIHDALCVARNLIINNSIVYG 417
Query: 693 GGAPEIELSLKLTKYADTVSGIDAYCFRALIAGGGAPEIELSLKLTKYADTVSGIDAYCF 752
GG+ EI S+ + AD G+ + Y
Sbjct: 418 GGSAEISCSIAVEAAADRHPGV---------------------------------EQYAI 444
Query: 753 RAFAQALEVIPLTLAENAGLNPISTVTELRNRHA-QGETTTGINVRKGAITNILEENVVQ 811
RAFA AL+ IPL LAEN+GL PI T+T ++++H + + GI+ ++ E+NV +
Sbjct: 445 RAFADALDAIPLALAENSGLPPIDTLTVVKSQHVKENNSRCGIDCNDVGTNDMKEQNVFE 504
Query: 812 PLLVSTSAITLSTETVRSILKIDDIV 837
L+ I L+T+ V+ ILKIDD++
Sbjct: 505 TLIGKQQQILLATQVVKMILKIDDVI 530
Score = 149 bits (377), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 148/286 (51%), Gaps = 9/286 (3%)
Query: 77 IHPAAKMMDHKVVVSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDL 136
P HKV + + +E+ Y +V++ K G +++ Q D
Sbjct: 251 FEPPKPKTKHKVDIDTVEKFQTLRGQEQKYFDEMVQKCKDVGATLVICQW-----GFDDE 305
Query: 137 AIHFLDKIKVLVVKDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNS-- 194
A H L + ++ V+ + ++E + R + E L A LV E G +
Sbjct: 306 ANHLLMQRELPAVRWVGGVELELIAIATGGRIVPRFQELSTEKLGKAGLVREKSFGTTKD 365
Query: 195 RFVKISGIQNPGRTLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIE 254
R + I N + +T+ +RG NK++++E RS+HDALCV R L+ +++ GGG+ EI
Sbjct: 366 RMLYIEKCAN-SKAVTIFIRGGNKMMIEETKRSIHDALCVARNLIINNSIVYGGGSAEIS 424
Query: 255 LSLKLTKYADTVSGIDAYCFRAFAQALEVIPLTLAENAGLNPISTVTELRNRHA-QGETT 313
S+ + AD G++ Y RAFA AL+ IPL LAEN+GL PI T+T ++++H + +
Sbjct: 425 CSIAVEAAADRHPGVEQYAIRAFADALDAIPLALAENSGLPPIDTLTVVKSQHVKENNSR 484
Query: 314 TGINVRKGAITNILEENVVQPLLVSTSAITLSTETVRSILKIDDIL 359
GI+ ++ E+NV + L+ I L+T+ V+ ILKIDD++
Sbjct: 485 CGIDCNDVGTNDMKEQNVFETLIGKQQQILLATQVVKMILKIDDVI 530
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 55/80 (68%)
Query: 18 KDKSKATDIRNSNIGAAKAVADAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMNVI 77
K + + D + +NI A K+VA +RTSLGP+GMDKM+Q+ +G+VTITNDGATIL+ M+V
Sbjct: 21 KSRLQGLDAQKANIAAGKSVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILELMDVD 80
Query: 78 HPAAKMMDHKVVVSDYSAMD 97
+ AK+M DY D
Sbjct: 81 NQIAKLMVELSRSQDYDIGD 100
>sp|Q9V2T8|THSB_SULSO Thermosome subunit beta OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=thsB PE=3 SV=2
Length = 554
Score = 264 bits (675), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 165/483 (34%), Positives = 272/483 (56%), Gaps = 43/483 (8%)
Query: 358 ILVELSKAQDIEAGDGTTSVVIVAGSLLEAAEKLLHKGIHPTTISDAFQKAAAKCVEILT 417
+LV+++K QD E DGT + VI+AG L + AE LL+K IHPT I ++KA ++ +
Sbjct: 87 LLVQIAKGQDEETADGTKTAVILAGELAKKAEDLLYKEIHPTIIVSGYKKAEEIALKTIQ 146
Query: 418 EMSTPITLADRENLIKSAATSLNSKVVSQQASLLAPIAVDAVLKVVNPQRD-TNVDLKDI 476
E++ P+T+ D + L K A TSL SK V+ LA + V AV +V + D VDL ++
Sbjct: 147 EIAQPVTINDTDVLRKVALTSLGSKAVAGAREYLADLVVKAVAQVAELRGDKWYVDLDNV 206
Query: 477 KVIRKLGGTVEDTELVDGLVFTQKSANVNGPKRVEKAKIGLIQFCISPPKTDMDHKVVVS 536
++++K GG+V DT+LV G+V ++ + PKR+E AKI L+ + K ++D ++ ++
Sbjct: 207 QIVKKHGGSVNDTQLVYGIVVDKEVVHPGMPKRIENAKIALLDASLEVEKPELDAEIRIN 266
Query: 537 DYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDKIKVLVVKD 596
D + M + L+EE + V +I G NV++ QK I ++A H+L K +L V+
Sbjct: 267 DPTQMHKFLEEEENILKEKVDKIAATGANVVICQK-----GIDEVAQHYLAKKGILAVRR 321
Query: 597 IEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISGIQNPGRTLTV 656
++ D+E + + R I+++D + L A LVEE G + V + G +NP +++++
Sbjct: 322 AKKSDLEKLARATGGRVISNIDELTSQDLGYAALVEERKVGEDKMVFVEGAKNP-KSVSI 380
Query: 657 VVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYADTVSGIDA 716
++RG + V+DE R+L DAL V +++ +AGGGA EIE++ +L KY
Sbjct: 381 LIRGGLERVVDETERALRDALGTVADVIRDGRAVAGGGAVEIEIAKRLRKY--------- 431
Query: 717 YCFRALIAGGGAPEIELSLKLTKYADTVSGIDAYCFRAFAQALEVIPLTLAENAGLNPIS 776
AP+ V G + A+A A+E + + LAENAGL+PI
Sbjct: 432 -----------APQ-------------VGGKEQLAIEAYANAIEGLIMILAENAGLDPID 467
Query: 777 TVTELRNRHAQGETTT--GINVRKGAITNILEENVVQPLLVSTSAITLSTETVRSILKID 834
+ +LR+ H + ET G+N+ G ++ + V++P LV +A+ +TE V +L+ID
Sbjct: 468 KLMQLRSLH-ENETNKWYGLNLFTGNPEDMWKLGVIEPALVKMNAVKAATEAVTLVLRID 526
Query: 835 DIV 837
DIV
Sbjct: 527 DIV 529
Score = 165 bits (418), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/278 (34%), Positives = 164/278 (58%), Gaps = 9/278 (3%)
Query: 84 MDHKVVVSDYSAMDRVLKEERAYILNIVKQIKKAGCNVLLVQKSILRDAISDLAIHFLDK 143
+D ++ ++D + M + L+EE + V +I G NV++ QK I ++A H+L K
Sbjct: 259 LDAEIRINDPTQMHKFLEEEENILKEKVDKIAATGANVVICQK-----GIDEVAQHYLAK 313
Query: 144 IKVLVVKDIEREDIEFVCKTLNTRPIASLDHFLPEHLSSADLVEEIPAGNSRFVKISGIQ 203
+L V+ ++ D+E + + R I+++D + L A LVEE G + V + G +
Sbjct: 314 KGILAVRRAKKSDLEKLARATGGRVISNIDELTSQDLGYAALVEERKVGEDKMVFVEGAK 373
Query: 204 NPGRTLTVVVRGSNKLVLDEAARSLHDALCVVRCLVKQRALIAGGGAPEIELSLKLTKYA 263
NP +++++++RG + V+DE R+L DAL V +++ +AGGGA EIE++ +L KYA
Sbjct: 374 NP-KSVSILIRGGLERVVDETERALRDALGTVADVIRDGRAVAGGGAVEIEIAKRLRKYA 432
Query: 264 DTVSGIDAYCFRAFAQALEVIPLTLAENAGLNPISTVTELRNRHAQGETTT--GINVRKG 321
V G + A+A A+E + + LAENAGL+PI + +LR+ H + ET G+N+ G
Sbjct: 433 PQVGGKEQLAIEAYANAIEGLIMILAENAGLDPIDKLMQLRSLH-ENETNKWYGLNLFTG 491
Query: 322 AITNILEENVVQPLLVSTSAITLSTETVRSILKIDDIL 359
++ + V++P LV +A+ +TE V +L+IDDI+
Sbjct: 492 NPEDMWKLGVIEPALVKMNAVKAATEAVTLVLRIDDIV 529
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 45/56 (80%)
Query: 29 SNIGAAKAVADAIRTSLGPRGMDKMIQASNGEVTITNDGATILKQMNVIHPAAKMM 84
+NI A KA+ +A++++ GPRGMDKM+ S G++TITNDGATIL +M++ HP K++
Sbjct: 33 ANIAAVKAIEEALKSTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHPTGKLL 88
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.360
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 276,024,738
Number of Sequences: 539616
Number of extensions: 11215418
Number of successful extensions: 40928
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1226
Number of HSP's successfully gapped in prelim test: 52
Number of HSP's that attempted gapping in prelim test: 34314
Number of HSP's gapped (non-prelim): 5190
length of query: 841
length of database: 191,569,459
effective HSP length: 126
effective length of query: 715
effective length of database: 123,577,843
effective search space: 88358157745
effective search space used: 88358157745
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)