RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy8875
(734 letters)
>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor
{Human (Homo sapiens) [TaxId: 9606]}
Length = 266
Score = 224 bits (572), Expect = 8e-69
Identities = 102/246 (41%), Positives = 162/246 (65%), Gaps = 3/246 (1%)
Query: 475 ASLLFARKHDIRKISLDHHEMTAIVNSTKSATAIDFVFRTGMIFWSDISEKKIYKAPID- 533
A L F +H++RK++LD E T+++ + ++ A+D + I+WSD+S++ I +D
Sbjct: 2 AYLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDR 61
Query: 534 --EGSERTVVIEEDKTIADGLAVDWIYSHIYWTDAHKNTIELANFEGTMRKVLVRSYLDE 591
S VI D DGLAVDWI+S+IYWTD+ T+ +A+ +G RK L R +
Sbjct: 62 AHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSK 121
Query: 592 PRSLALNPIDGWMYWSDWGQNAKIERAGMDGSHRNMVIVSDIKWPNGLTLDLVQRRLYWV 651
PR++ ++P+ G+MYW+DWG AKI++ G++G ++ +I+WPNG+TLDL+ RLYWV
Sbjct: 122 PRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWV 181
Query: 652 DAKLNEISSCDYNGGNRRLVLYSPQTLSHPFSISTFEDWLYWSDWQQKAIYKANKFTGDN 711
D+KL+ ISS D NGGNR+ +L + L+HPFS++ FED ++W+D +AI+ AN+ TG +
Sbjct: 182 DSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSD 241
Query: 712 LTAITG 717
+ +
Sbjct: 242 VNLLAE 247
Score = 51.5 bits (122), Expect = 1e-07
Identities = 26/152 (17%), Positives = 50/152 (32%), Gaps = 2/152 (1%)
Query: 447 KGGFKCECVAGYIKDPHHPTQCKAAEGHASLLFARKHDIRKISLD-HHEMTAIVNSTKSA 505
KG + P + I+K L+ + + + +
Sbjct: 107 KGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWP 166
Query: 506 TAIDFVFRTGMIFWSDISEKKIYKAPIDEGSERTVVIEEDKTIADGLAVDWIYSHIYWTD 565
I +G ++W D I ++ G R ++E++K +A ++ ++WTD
Sbjct: 167 NGITLDLLSGRLYWVDSKLHSISSIDVN-GGNRKTILEDEKRLAHPFSLAVFEDKVFWTD 225
Query: 566 AHKNTIELANFEGTMRKVLVRSYLDEPRSLAL 597
I AN L+ L P + L
Sbjct: 226 IINEAIFSANRLTGSDVNLLAENLLSPEDMVL 257
>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}
Length = 263
Score = 214 bits (546), Expect = 5e-65
Identities = 76/253 (30%), Positives = 131/253 (51%), Gaps = 11/253 (4%)
Query: 477 LLFARKHDIRKISLDHHEMTAIVNST------KSATAIDFVFRTGMIFWSDISEKKIYKA 530
LLFA+ I ++ L+ + M K + F +++W+DISE I +A
Sbjct: 4 LLFAQTGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRA 63
Query: 531 PIDEGSERTVVIEEDKTIADGLAVDWIYSHIYWTDAHKNTIELANFEGTMRKVLVRSYLD 590
+ E T +I +D +G+A+D + I+WTD+ + IE+A +GT R+VL + L
Sbjct: 64 SLHG-GEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLV 122
Query: 591 EPRSLALNPIDGWMYWSDWGQ-NAKIERAGMDGSHRNMVIVSDIKWPNGLTLDLVQRRLY 649
PR + +P+ G +YW+DW + N KIE + MDG++R ++ ++ PNGLT D +L
Sbjct: 123 NPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLC 182
Query: 650 WVDAKLNEISSCDYNGGNRRLVLYSPQTLSHPFSISTFEDWLYWSDWQQKAIYKANKFTG 709
WVDA + + RR VL + L +PF+++++ LY++DW+ ++ +
Sbjct: 183 WVDAGTHRAECLNPAQPGRRKVL---EGLQYPFAVTSYGKNLYYTDWKTNSVIAMDLAIS 239
Query: 710 DNLTAITGVHQTH 722
+ QT
Sbjct: 240 KEMDTFHPHKQTR 252
Score = 32.5 bits (73), Expect = 0.13
Identities = 7/75 (9%), Positives = 23/75 (30%), Gaps = 2/75 (2%)
Query: 480 ARKHDIRKISLDHHEMTAIVNSTKSATAIDFVFRTGMIFWSDISEKKIYKAPIDEGSERT 539
A H ++ ++ + A+ + ++++D + + E
Sbjct: 186 AGTHRAECLNPAQPGRRKVLEGLQYPFAVT-SYG-KNLYYTDWKTNSVIAMDLAISKEMD 243
Query: 540 VVIEEDKTIADGLAV 554
+T G+ +
Sbjct: 244 TFHPHKQTRLYGITI 258
Score = 31.4 bits (70), Expect = 0.31
Identities = 9/38 (23%), Positives = 19/38 (50%)
Query: 688 EDWLYWSDWQQKAIYKANKFTGDNLTAITGVHQTHEPL 725
+ +YW+D + +I +A+ G+ T I + E +
Sbjct: 47 DKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGI 84
>d1d2la_ g.12.1.1 (A:) Ligand-binding domain of low-density
lipoprotein receptor {Human (Homo sapiens) [TaxId:
9606]}
Length = 45
Score = 60.2 bits (146), Expect = 1e-12
Identities = 21/40 (52%), Positives = 26/40 (65%)
Query: 133 RTCQASEFRCGNNRCIPNHWQCDGEFDCSDKSDEDPEMCN 172
CQ EF C N+RCI W+CDG+ DC D SDE P +C+
Sbjct: 4 PQCQPGEFACANSRCIQERWKCDGDNDCLDNSDEAPALCH 43
Score = 54.8 bits (132), Expect = 1e-10
Identities = 20/36 (55%), Positives = 22/36 (61%)
Query: 264 TCRSDEFTCANGNCIQRIWLCDGDDDCKDGSDEKSC 299
C+ EF CAN CIQ W CDGD+DC D SDE
Sbjct: 5 QCQPGEFACANSRCIQERWKCDGDNDCLDNSDEAPA 40
Score = 49.4 bits (118), Expect = 9e-09
Identities = 17/41 (41%), Positives = 17/41 (41%)
Query: 222 GSKPCRNSTMFRCTGGMCIPSTWVCDGQNDCPDGVDEKKCH 262
GS P F C CI W CDG NDC D DE
Sbjct: 1 GSPPQCQPGEFACANSRCIQERWKCDGDNDCLDNSDEAPAL 41
Score = 47.1 bits (112), Expect = 6e-08
Identities = 16/39 (41%), Positives = 16/39 (41%)
Query: 51 SKPCRNSTMFRCTGGMCIPSTWVCDGQNDCPDGVDEKKC 89
S P F C CI W CDG NDC D DE
Sbjct: 2 SPPQCQPGEFACANSRCIQERWKCDGDNDCLDNSDEAPA 40
Score = 45.2 bits (107), Expect = 3e-07
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 90 QKRICGQEEFTCRSSPGECVPLTWMCDDNPDCSDGSDEKSC 130
C EF C + C+ W CD + DC D SDE
Sbjct: 2 SPPQCQPGEFACAN--SRCIQERWKCDGDNDCLDNSDEAPA 40
Score = 32.8 bits (75), Expect = 0.007
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Query: 300 QPVKCTAGQFTCQNLTACIPDKWVCDGD 327
P +C G+F C N + CI ++W CDGD
Sbjct: 2 SPPQCQPGEFACAN-SRCIQERWKCDGD 28
>d2fcwb2 g.12.1.1 (B:125-163) Ligand-binding domain of low-density
lipoprotein receptor {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 59.8 bits (145), Expect = 2e-12
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 134 TCQASEFRCGNNRCIPNHWQCDGEFDCSDKSDEDPEMC 171
TC + F+C ++ CIP W CD + DC D SDE P+ C
Sbjct: 2 TCGPASFQCNSSTCIPQLWACDNDPDCEDGSDEWPQRC 39
Score = 54.8 bits (132), Expect = 1e-10
Identities = 17/36 (47%), Positives = 21/36 (58%)
Query: 264 TCRSDEFTCANGNCIQRIWLCDGDDDCKDGSDEKSC 299
TC F C + CI ++W CD D DC+DGSDE
Sbjct: 2 TCGPASFQCNSSTCIPQLWACDNDPDCEDGSDEWPQ 37
Score = 46.7 bits (111), Expect = 9e-08
Identities = 14/35 (40%), Positives = 15/35 (42%)
Query: 228 NSTMFRCTGGMCIPSTWVCDGQNDCPDGVDEKKCH 262
F+C CIP W CD DC DG DE
Sbjct: 4 GPASFQCNSSTCIPQLWACDNDPDCEDGSDEWPQR 38
Score = 46.3 bits (110), Expect = 1e-07
Identities = 14/34 (41%), Positives = 15/34 (44%)
Query: 56 NSTMFRCTGGMCIPSTWVCDGQNDCPDGVDEKKC 89
F+C CIP W CD DC DG DE
Sbjct: 4 GPASFQCNSSTCIPQLWACDNDPDCEDGSDEWPQ 37
Score = 44.0 bits (104), Expect = 7e-07
Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Query: 94 CGQEEFTCRSSPGECVPLTWMCDDNPDCSDGSDEKSC 130
CG F C S C+P W CD++PDC DGSDE
Sbjct: 3 CGPASFQCNS--STCIPQLWACDNDPDCEDGSDEWPQ 37
Score = 31.3 bits (71), Expect = 0.024
Identities = 10/26 (38%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
Query: 302 VKCTAGQFTCQNLTACIPDKWVCDGD 327
+ C F C + + CIP W CD D
Sbjct: 1 LTCGPASFQCNS-STCIPQLWACDND 25
Score = 24.7 bits (54), Expect = 5.5
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 364 IVRTAVCDKHPDCPLMQDEDPTKC 387
I + CD PDC DE P +C
Sbjct: 16 IPQLWACDNDPDCEDGSDEWPQRC 39
>d1j8ea_ g.12.1.1 (A:) Ligand-binding domain of low-density
lipoprotein receptor {Human (Homo sapiens) [TaxId:
9606]}
Length = 44
Score = 58.6 bits (142), Expect = 5e-12
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 132 NRTCQASEFRCGNNRCIPNHWQCDGEFDCSDKSDEDPEMC 171
+ +C +++F+C + RCIP HW CDG+ DC D SDE C
Sbjct: 2 SHSCSSTQFKCNSGRCIPEHWTCDGDNDCGDYSDETHANC 41
Score = 55.9 bits (135), Expect = 4e-11
Identities = 18/37 (48%), Positives = 22/37 (59%)
Query: 264 TCRSDEFTCANGNCIQRIWLCDGDDDCKDGSDEKSCQ 300
+C S +F C +G CI W CDGD+DC D SDE
Sbjct: 4 SCSSTQFKCNSGRCIPEHWTCDGDNDCGDYSDETHAN 40
Score = 49.4 bits (118), Expect = 1e-08
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Query: 222 GSKPCRNSTMFRCTGGMCIPSTWVCDGQNDCPDGVDEKKCHETCRS 267
GS C ++ F+C G CIP W CDG NDC D DE C +
Sbjct: 1 GSHSCSSTQ-FKCNSGRCIPEHWTCDGDNDCGDYSDETHA--NCTN 43
Score = 47.8 bits (114), Expect = 3e-08
Identities = 18/34 (52%), Positives = 19/34 (55%)
Query: 57 STMFRCTGGMCIPSTWVCDGQNDCPDGVDEKKCQ 90
ST F+C G CIP W CDG NDC D DE
Sbjct: 7 STQFKCNSGRCIPEHWTCDGDNDCGDYSDETHAN 40
Score = 45.9 bits (109), Expect = 1e-07
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Query: 92 RICGQEEFTCRSSPGECVPLTWMCDDNPDCSDGSDEKSCK 131
C +F C S G C+P W CD + DC D SDE
Sbjct: 3 HSCSSTQFKCNS--GRCIPEHWTCDGDNDCGDYSDETHAN 40
Score = 30.9 bits (70), Expect = 0.031
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 7/40 (17%)
Query: 304 CTAGQFTCQNLTACIPDKWVCDGD------TVEKDSTCPN 337
C++ QF C + CIP+ W CDGD + E + C N
Sbjct: 5 CSSTQFKCNS-GRCIPEHWTCDGDNDCGDYSDETHANCTN 43
>d1f5ya1 g.12.1.1 (A:1-44) Ligand-binding domain of low-density
lipoprotein receptor {Human (Homo sapiens) [TaxId:
9606]}
Length = 44
Score = 57.9 bits (140), Expect = 9e-12
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 129 SCKNRTCQASEFRCGNNRCIPNHWQCDGEFDCSDKSDEDPEMC 171
S C+ +EF+C + +CI W CDG +C D SDE E C
Sbjct: 2 SAVGDRCERNEFQCQDGKCISYKWVCDGSAECQDGSDESQETC 44
Score = 55.6 bits (134), Expect = 6e-11
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 261 CHETCRSDEFTCANGNCIQRIWLCDGDDDCKDGSDEKSC 299
+ C +EF C +G CI W+CDG +C+DGSDE
Sbjct: 4 VGDRCERNEFQCQDGKCISYKWVCDGSAECQDGSDESQE 42
Score = 47.5 bits (113), Expect = 5e-08
Identities = 15/35 (42%), Positives = 18/35 (51%)
Query: 228 NSTMFRCTGGMCIPSTWVCDGQNDCPDGVDEKKCH 262
F+C G CI WVCDG +C DG DE +
Sbjct: 9 ERNEFQCQDGKCISYKWVCDGSAECQDGSDESQET 43
Score = 47.1 bits (112), Expect = 6e-08
Identities = 15/34 (44%), Positives = 18/34 (52%)
Query: 56 NSTMFRCTGGMCIPSTWVCDGQNDCPDGVDEKKC 89
F+C G CI WVCDG +C DG DE +
Sbjct: 9 ERNEFQCQDGKCISYKWVCDGSAECQDGSDESQE 42
Score = 45.6 bits (108), Expect = 2e-07
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 94 CGQEEFTCRSSPGECVPLTWMCDDNPDCSDGSDEKSC 130
C + EF C+ G+C+ W+CD + +C DGSDE
Sbjct: 8 CERNEFQCQD--GKCISYKWVCDGSAECQDGSDESQE 42
Score = 31.3 bits (71), Expect = 0.027
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 298 SCQPVKCTAGQFTCQNLTACIPDKWVCDGD 327
S +C +F CQ+ CI KWVCDG
Sbjct: 2 SAVGDRCERNEFQCQD-GKCISYKWVCDGS 30
>d1f8za_ g.12.1.1 (A:) Ligand-binding domain of low-density
lipoprotein receptor {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 57.4 bits (139), Expect = 1e-11
Identities = 21/36 (58%), Positives = 24/36 (66%)
Query: 264 TCRSDEFTCANGNCIQRIWLCDGDDDCKDGSDEKSC 299
TCR DEF C++GNCI CD + DCKD SDE C
Sbjct: 2 TCRPDEFQCSDGNCIHGSRQCDREYDCKDMSDEVGC 37
Score = 53.2 bits (128), Expect = 4e-10
Identities = 17/33 (51%), Positives = 21/33 (63%)
Query: 134 TCQASEFRCGNNRCIPNHWQCDGEFDCSDKSDE 166
TC+ EF+C + CI QCD E+DC D SDE
Sbjct: 2 TCRPDEFQCSDGNCIHGSRQCDREYDCKDMSDE 34
Score = 48.9 bits (117), Expect = 1e-08
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Query: 94 CGQEEFTCRSSPGECVPLTWMCDDNPDCSDGSDEKSCKN 132
C +EF C G C+ + CD DC D SDE C N
Sbjct: 3 CRPDEFQCSD--GNCIHGSRQCDREYDCKDMSDEVGCVN 39
Score = 47.8 bits (114), Expect = 3e-08
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 56 NSTMFRCTGGMCIPSTWVCDGQNDCPDGVDEKKC 89
F+C+ G CI + CD + DC D DE C
Sbjct: 4 RPDEFQCSDGNCIHGSRQCDREYDCKDMSDEVGC 37
Score = 47.8 bits (114), Expect = 3e-08
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 228 NSTMFRCTGGMCIPSTWVCDGQNDCPDGVDEKKC 261
F+C+ G CI + CD + DC D DE C
Sbjct: 4 RPDEFQCSDGNCIHGSRQCDREYDCKDMSDEVGC 37
Score = 30.8 bits (70), Expect = 0.038
Identities = 7/24 (29%), Positives = 10/24 (41%), Gaps = 1/24 (4%)
Query: 304 CTAGQFTCQNLTACIPDKWVCDGD 327
C +F C + CI CD +
Sbjct: 3 CRPDEFQCSD-GNCIHGSRQCDRE 25
>d2fcwb1 g.12.1.1 (B:86-124) Ligand-binding domain of low-density
lipoprotein receptor {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 57.4 bits (139), Expect = 1e-11
Identities = 21/36 (58%), Positives = 24/36 (66%)
Query: 264 TCRSDEFTCANGNCIQRIWLCDGDDDCKDGSDEKSC 299
TC EF C +G CI R ++CD D DC DGSDE SC
Sbjct: 2 TCSQAEFRCHDGKCISRQFVCDSDRDCLDGSDEASC 37
Score = 55.5 bits (134), Expect = 6e-11
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 133 RTCQASEFRCGNNRCIPNHWQCDGEFDCSDKSDED 167
+TC +EFRC + +CI + CD + DC D SDE
Sbjct: 1 KTCSQAEFRCHDGKCISRQFVCDSDRDCLDGSDEA 35
Score = 48.2 bits (115), Expect = 2e-08
Identities = 16/34 (47%), Positives = 18/34 (52%)
Query: 56 NSTMFRCTGGMCIPSTWVCDGQNDCPDGVDEKKC 89
+ FRC G CI +VCD DC DG DE C
Sbjct: 4 SQAEFRCHDGKCISRQFVCDSDRDCLDGSDEASC 37
Score = 48.2 bits (115), Expect = 2e-08
Identities = 16/34 (47%), Positives = 18/34 (52%)
Query: 228 NSTMFRCTGGMCIPSTWVCDGQNDCPDGVDEKKC 261
+ FRC G CI +VCD DC DG DE C
Sbjct: 4 SQAEFRCHDGKCISRQFVCDSDRDCLDGSDEASC 37
Score = 48.2 bits (115), Expect = 2e-08
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Query: 92 RICGQEEFTCRSSPGECVPLTWMCDDNPDCSDGSDEKSC 130
+ C Q EF C G+C+ ++CD + DC DGSDE SC
Sbjct: 1 KTCSQAEFRCHD--GKCISRQFVCDSDRDCLDGSDEASC 37
Score = 30.8 bits (70), Expect = 0.030
Identities = 9/24 (37%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Query: 304 CTAGQFTCQNLTACIPDKWVCDGD 327
C+ +F C + CI ++VCD D
Sbjct: 3 CSQAEFRCHD-GKCISRQFVCDSD 25
>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus)
[TaxId: 9913]}
Length = 51
Score = 56.8 bits (137), Expect = 3e-11
Identities = 14/52 (26%), Positives = 21/52 (40%), Gaps = 4/52 (7%)
Query: 392 CAKDNGGCLHKCVDLPVGYMCECNEGYKLSSNRHTCIDIDECETPGSCSQIC 443
C+ DNGGC C + C C GY L + +C+ + C +
Sbjct: 1 CSLDNGGCDQFCREERSEVRCSCAHGYVLGDDSKSCVSTERF----PCGKFT 48
Score = 37.9 bits (88), Expect = 1e-04
Identities = 13/50 (26%), Positives = 17/50 (34%), Gaps = 6/50 (12%)
Query: 177 CAAVNGHCSHLCLPAPQINAHSPKISCACPEGLKLLPDLLMCAEAGSKPC 226
C+ NG C C ++ C+C G L D C PC
Sbjct: 1 CSLDNGGCDQFCREERS------EVRCSCAHGYVLGDDSKSCVSTERFPC 44
Score = 32.1 bits (73), Expect = 0.014
Identities = 9/22 (40%), Positives = 11/22 (50%)
Query: 437 GSCSQICLNEKGGFKCECVAGY 458
G C Q C E+ +C C GY
Sbjct: 6 GGCDQFCREERSEVRCSCAHGY 27
>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human
(Homo sapiens) [TaxId: 9606]}
Length = 51
Score = 55.6 bits (134), Expect = 7e-11
Identities = 16/53 (30%), Positives = 21/53 (39%), Gaps = 4/53 (7%)
Query: 392 CAKDNGGCLHKCVDLPVGYMCECNEGYKLSSNRHTCIDIDECETPGSCSQICL 444
C+ DNG C C + +C C GY L+ N CI C + L
Sbjct: 3 CSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTGPY----PCGKQTL 51
Score = 40.2 bits (94), Expect = 2e-05
Identities = 13/50 (26%), Positives = 17/50 (34%), Gaps = 6/50 (12%)
Query: 177 CAAVNGHCSHLCLPAPQINAHSPKISCACPEGLKLLPDLLMCAEAGSKPC 226
C+ NG C C + C+C G L + C G PC
Sbjct: 3 CSLDNGDCDQFCHEEQN------SVVCSCARGYTLADNGKACIPTGPYPC 46
Score = 32.1 bits (73), Expect = 0.015
Identities = 9/22 (40%), Positives = 10/22 (45%)
Query: 437 GSCSQICLNEKGGFKCECVAGY 458
G C Q C E+ C C GY
Sbjct: 8 GDCDQFCHEEQNSVVCSCARGY 29
>d2gtlm2 g.12.1.1 (M:60-101) Hemoglobin linker chain l1 {Common
earthworm (Lumbricus terrestris) [TaxId: 6398]}
Length = 42
Score = 55.3 bits (133), Expect = 8e-11
Identities = 19/41 (46%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 134 TCQASEFRCGNN--RCIPNHWQCDGEFDCSDKSDEDPEMCN 172
C E C + CI + CDGE DC D SDEDPE C+
Sbjct: 2 HCDEHESECRGDVPECIHDLLFCDGEKDCRDGSDEDPETCS 42
Score = 47.9 bits (114), Expect = 3e-08
Identities = 15/37 (40%), Positives = 17/37 (45%)
Query: 94 CGQEEFTCRSSPGECVPLTWMCDDNPDCSDGSDEKSC 130
C + E CR EC+ CD DC DGSDE
Sbjct: 3 CDEHESECRGDVPECIHDLLFCDGEKDCRDGSDEDPE 39
Score = 46.4 bits (110), Expect = 1e-07
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 264 TCRSDEFTCAN--GNCIQRIWLCDGDDDCKDGSDEKSC 299
C E C CI + CDG+ DC+DGSDE
Sbjct: 2 HCDEHESECRGDVPECIHDLLFCDGEKDCRDGSDEDPE 39
Score = 40.6 bits (95), Expect = 1e-05
Identities = 13/36 (36%), Positives = 14/36 (38%), Gaps = 2/36 (5%)
Query: 229 STMFRCTG--GMCIPSTWVCDGQNDCPDGVDEKKCH 262
C G CI CDG+ DC DG DE
Sbjct: 5 EHESECRGDVPECIHDLLFCDGEKDCRDGSDEDPET 40
Score = 40.6 bits (95), Expect = 1e-05
Identities = 13/35 (37%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 57 STMFRCTG--GMCIPSTWVCDGQNDCPDGVDEKKC 89
C G CI CDG+ DC DG DE
Sbjct: 5 EHESECRGDVPECIHDLLFCDGEKDCRDGSDEDPE 39
Score = 30.6 bits (69), Expect = 0.044
Identities = 8/25 (32%), Positives = 11/25 (44%), Gaps = 1/25 (4%)
Query: 304 CTAGQFTCQNLTA-CIPDKWVCDGD 327
C + C+ CI D CDG+
Sbjct: 3 CDEHESECRGDVPECIHDLLFCDGE 27
Score = 24.4 bits (53), Expect = 7.0
Identities = 10/24 (41%), Positives = 10/24 (41%)
Query: 364 IVRTAVCDKHPDCPLMQDEDPTKC 387
I CD DC DEDP C
Sbjct: 18 IHDLLFCDGEKDCRDGSDEDPETC 41
>d1ajja_ g.12.1.1 (A:) Ligand-binding domain of low-density
lipoprotein receptor {Human (Homo sapiens) [TaxId:
9606]}
Length = 37
Score = 54.4 bits (131), Expect = 1e-10
Identities = 19/35 (54%), Positives = 23/35 (65%)
Query: 265 CRSDEFTCANGNCIQRIWLCDGDDDCKDGSDEKSC 299
C + EF C +G CI W CDG DCKD SDE++C
Sbjct: 2 CSAFEFHCLSGECIHSSWRCDGGPDCKDKSDEENC 36
Score = 50.9 bits (122), Expect = 2e-09
Identities = 18/33 (54%), Positives = 22/33 (66%)
Query: 135 CQASEFRCGNNRCIPNHWQCDGEFDCSDKSDED 167
C A EF C + CI + W+CDG DC DKSDE+
Sbjct: 2 CSAFEFHCLSGECIHSSWRCDGGPDCKDKSDEE 34
Score = 49.0 bits (117), Expect = 1e-08
Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 53 PCRNSTMFRCTGGMCIPSTWVCDGQNDCPDGVDEKKC 89
PC + F C G CI S+W CDG DC D DE+ C
Sbjct: 1 PCS-AFEFHCLSGECIHSSWRCDGGPDCKDKSDEENC 36
Score = 49.0 bits (117), Expect = 1e-08
Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 225 PCRNSTMFRCTGGMCIPSTWVCDGQNDCPDGVDEKKC 261
PC + F C G CI S+W CDG DC D DE+ C
Sbjct: 1 PCS-AFEFHCLSGECIHSSWRCDGGPDCKDKSDEENC 36
Score = 45.5 bits (108), Expect = 2e-07
Identities = 19/37 (51%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 94 CGQEEFTCRSSPGECVPLTWMCDDNPDCSDGSDEKSC 130
C EF C S GEC+ +W CD PDC D SDE++C
Sbjct: 2 CSAFEFHCLS--GECIHSSWRCDGGPDCKDKSDEENC 36
Score = 30.5 bits (69), Expect = 0.046
Identities = 10/24 (41%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Query: 304 CTAGQFTCQNLTACIPDKWVCDGD 327
C+A +F C + CI W CDG
Sbjct: 2 CSAFEFHCLS-GECIHSSWRCDGG 24
>d2gtln2 g.12.1.1 (N:61-101) Extracellular hemoglobin linker l2
subunit {Common earthworm (Lumbricus terrestris) [TaxId:
6398]}
Length = 41
Score = 53.3 bits (128), Expect = 3e-10
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 135 CQASEFRCGNN--RCIPNHWQCDGEFDCSDKSDEDPEMCN 172
C+ F+CG N CI + CDG DC + DEDP++C+
Sbjct: 2 CEKRTFQCGGNEQECISDLLVCDGHKDCHNAHDEDPDVCD 41
Score = 48.3 bits (115), Expect = 2e-08
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 94 CGQEEFTCRSSPGECVPLTWMCDDNPDCSDGSDEKSC 130
C + F C + EC+ +CD + DC + DE
Sbjct: 2 CEKRTFQCGGNEQECISDLLVCDGHKDCHNAHDEDPD 38
Score = 46.4 bits (110), Expect = 1e-07
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 2/37 (5%)
Query: 265 CRSDEFTCAN--GNCIQRIWLCDGDDDCKDGSDEKSC 299
C F C CI + +CDG DC + DE
Sbjct: 2 CEKRTFQCGGNEQECISDLLVCDGHKDCHNAHDEDPD 38
Score = 41.8 bits (98), Expect = 4e-06
Identities = 13/36 (36%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Query: 229 STMFRCTG--GMCIPSTWVCDGQNDCPDGVDEKKCH 262
F+C G CI VCDG DC + DE
Sbjct: 4 KRTFQCGGNEQECISDLLVCDGHKDCHNAHDEDPDV 39
Score = 41.8 bits (98), Expect = 5e-06
Identities = 13/35 (37%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 57 STMFRCTG--GMCIPSTWVCDGQNDCPDGVDEKKC 89
F+C G CI VCDG DC + DE
Sbjct: 4 KRTFQCGGNEQECISDLLVCDGHKDCHNAHDEDPD 38
Score = 29.8 bits (67), Expect = 0.073
Identities = 10/25 (40%), Positives = 10/25 (40%), Gaps = 1/25 (4%)
Query: 304 CTAGQFTCQNLT-ACIPDKWVCDGD 327
C F C CI D VCDG
Sbjct: 2 CEKRTFQCGGNEQECISDLLVCDGH 26
Score = 24.1 bits (52), Expect = 9.4
Identities = 12/24 (50%), Positives = 12/24 (50%)
Query: 364 IVRTAVCDKHPDCPLMQDEDPTKC 387
I VCD H DC DEDP C
Sbjct: 17 ISDLLVCDGHKDCHNAHDEDPDVC 40
>d1ijqa2 g.3.11.1 (A:643-692) Low density lipoprotein (LDL)
receptor, different EGF domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 50
Score = 53.4 bits (128), Expect = 4e-10
Identities = 25/47 (53%), Positives = 30/47 (63%)
Query: 172 NGVNHCAAVNGHCSHLCLPAPQINAHSPKISCACPEGLKLLPDLLMC 218
N NG C +LCLPAPQIN HSPK +CACP+G+ L D+ C
Sbjct: 2 NWCERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSC 48
Score = 46.5 bits (110), Expect = 1e-07
Identities = 11/45 (24%), Positives = 20/45 (44%), Gaps = 6/45 (13%)
Query: 390 DECAKDNGGCLHKCVDLPV------GYMCECNEGYKLSSNRHTCI 428
+ NGGC + C+ P + C C +G L+ + +C+
Sbjct: 5 ERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSCL 49
Score = 26.4 bits (58), Expect = 1.7
Identities = 8/39 (20%), Positives = 11/39 (28%), Gaps = 7/39 (17%)
Query: 431 DECETP-GSCSQICL------NEKGGFKCECVAGYIKDP 462
+ G C +CL F C C G +
Sbjct: 5 ERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLAR 43
>d1xfea2 g.12.1.1 (A:1-44) Ligand-binding domain of low-density
lipoprotein receptor {Human (Homo sapiens) [TaxId:
9606]}
Length = 44
Score = 53.2 bits (128), Expect = 4e-10
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 134 TCQA-SEFRCGNNRCIPNHWQCDGEFDCSDKSDEDPEMC 171
C+ ++F+C + CI C+ DC D SDE + C
Sbjct: 5 LCEGPNKFKCHSGECITLDKVCNMARDCRDWSDEPIKEC 43
Score = 50.9 bits (122), Expect = 3e-09
Identities = 12/39 (30%), Positives = 18/39 (46%)
Query: 261 CHETCRSDEFTCANGNCIQRIWLCDGDDDCKDGSDEKSC 299
++F C +G CI +C+ DC+D SDE
Sbjct: 3 VTLCEGPNKFKCHSGECITLDKVCNMARDCRDWSDEPIK 41
Score = 50.2 bits (120), Expect = 5e-09
Identities = 13/37 (35%), Positives = 15/37 (40%)
Query: 226 CRNSTMFRCTGGMCIPSTWVCDGQNDCPDGVDEKKCH 262
C F+C G CI VC+ DC D DE
Sbjct: 6 CEGPNKFKCHSGECITLDKVCNMARDCRDWSDEPIKE 42
Score = 49.4 bits (118), Expect = 9e-09
Identities = 13/36 (36%), Positives = 15/36 (41%)
Query: 54 CRNSTMFRCTGGMCIPSTWVCDGQNDCPDGVDEKKC 89
C F+C G CI VC+ DC D DE
Sbjct: 6 CEGPNKFKCHSGECITLDKVCNMARDCRDWSDEPIK 41
Score = 42.1 bits (99), Expect = 3e-06
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Query: 94 CGQEEFTCRSSPGECVPLTWMCDDNPDCSDGSDEKSC 130
G +F C S GEC+ L +C+ DC D SDE
Sbjct: 7 EGPNKFKCHS--GECITLDKVCNMARDCRDWSDEPIK 41
Score = 27.1 bits (60), Expect = 0.89
Identities = 6/21 (28%), Positives = 9/21 (42%), Gaps = 1/21 (4%)
Query: 307 GQFTCQNLTACIPDKWVCDGD 327
+F C + CI VC+
Sbjct: 10 NKFKCHS-GECITLDKVCNMA 29
Score = 26.7 bits (59), Expect = 1.1
Identities = 9/25 (36%), Positives = 11/25 (44%)
Query: 364 IVRTAVCDKHPDCPLMQDEDPTKCG 388
I VC+ DC DE +CG
Sbjct: 20 ITLDKVCNMARDCRDWSDEPIKECG 44
>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin
IIa) {Human (Homo sapiens) [TaxId: 9606]}
Length = 50
Score = 53.3 bits (128), Expect = 5e-10
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 392 CAKDNGGCLHKCVDLPVGYMCECNEGYKLSSNRHTCIDIDEC 433
C+ DNGGC H C++ C C GYKL + C +
Sbjct: 2 CSLDNGGCTHYCLEEVGWRRCSCAPGYKLGDDLLQCHPAVKF 43
Score = 39.4 bits (92), Expect = 4e-05
Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 6/50 (12%)
Query: 177 CAAVNGHCSHLCLPAPQINAHSPKISCACPEGLKLLPDLLMCAEAGSKPC 226
C+ NG C+H CL C+C G KL DLL C A PC
Sbjct: 2 CSLDNGGCTHYCLEEVG------WRRCSCAPGYKLGDDLLQCHPAVKFPC 45
Score = 32.5 bits (74), Expect = 0.013
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 437 GSCSQICLNEKGGFKCECVAGY 458
G C+ CL E G +C C GY
Sbjct: 7 GGCTHYCLEEVGWRRCSCAPGY 28
>d1cr8a_ g.12.1.1 (A:) Ligand-binding domain of low-density
lipoprotein receptor {Human (Homo sapiens) [TaxId:
9606]}
Length = 42
Score = 52.9 bits (127), Expect = 5e-10
Identities = 23/40 (57%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 264 TCRSDEFTC-ANGNCIQRIWLCDGDDDCKDGSDEKSCQPV 302
C +DEF C +G CI W CDGD DC D SDEKSC+ V
Sbjct: 3 GCHTDEFQCRLDGLCIPLRWRCDGDTDCMDSSDEKSCEGV 42
Score = 49.8 bits (119), Expect = 7e-09
Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 133 RTCQASEFRCGNN-RCIPNHWQCDGEFDCSDKSDEDPEMCNGV 174
C EF+C + CIP W+CDG+ DC D SDE + C GV
Sbjct: 2 GGCHTDEFQCRLDGLCIPLRWRCDGDTDCMDSSDE--KSCEGV 42
Score = 47.9 bits (114), Expect = 3e-08
Identities = 21/39 (53%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 94 CGQEEFTCRSSPGECVPLTWMCDDNPDCSDGSDEKSCKN 132
C +EF CR G C+PL W CD + DC D SDEKSC+
Sbjct: 4 CHTDEFQCRLD-GLCIPLRWRCDGDTDCMDSSDEKSCEG 41
Score = 46.0 bits (109), Expect = 2e-07
Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 56 NSTMFRC-TGGMCIPSTWVCDGQNDCPDGVDEKKC 89
++ F+C G+CIP W CDG DC D DEK C
Sbjct: 5 HTDEFQCRLDGLCIPLRWRCDGDTDCMDSSDEKSC 39
Score = 46.0 bits (109), Expect = 2e-07
Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 228 NSTMFRC-TGGMCIPSTWVCDGQNDCPDGVDEKKC 261
++ F+C G+CIP W CDG DC D DEK C
Sbjct: 5 HTDEFQCRLDGLCIPLRWRCDGDTDCMDSSDEKSC 39
Score = 35.2 bits (81), Expect = 0.001
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 301 PVKCTAGQFTCQNLTACIPDKWVCDGD 327
P C +F C+ CIP +W CDGD
Sbjct: 1 PGGCHTDEFQCRLDGLCIPLRWRCDGD 27
>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL)
receptor, different EGF domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 40
Score = 52.1 bits (125), Expect = 1e-09
Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 388 GVDECAKDNGGCLHKCVDLPVGYMCECNEGYKLSSNRHTC 427
G +EC +NGGC H C DL +GY C C +G++L + C
Sbjct: 1 GTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQ-RRC 39
Score = 37.4 bits (87), Expect = 1e-04
Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Query: 431 DECET-PGSCSQICLNEKGGFKCECVAGY 458
+EC G CS +C + K G++C C G+
Sbjct: 3 NECLDNNGGCSHVCNDLKIGYECLCPDGF 31
Score = 37.0 bits (86), Expect = 2e-04
Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 6/39 (15%)
Query: 173 GVNHCAAVNGHCSHLCLPAPQINAHSPKISCACPEGLKL 211
G N C NG CSH+C C CP+G +L
Sbjct: 1 GTNECLDNNGGCSHVCNDLKI------GYECLCPDGFQL 33
>d1f5ya2 g.12.1.1 (A:45-85) Ligand-binding domain of low-density
lipoprotein receptor {Human (Homo sapiens) [TaxId:
9606]}
Length = 41
Score = 52.1 bits (125), Expect = 1e-09
Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 264 TCRSDEFTCANGN--CIQRIWLCDGDDDCKDGSDEKSC 299
TC+S +F+C CI + W CDG DC +GSDE+ C
Sbjct: 4 TCKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDEQGC 41
Score = 50.2 bits (120), Expect = 5e-09
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 94 CGQEEFTCRSSPGECVPLTWMCDDNPDCSDGSDEKSC 130
C +F+C C+P W CD DC +GSDE+ C
Sbjct: 5 CKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDEQGC 41
Score = 49.8 bits (119), Expect = 6e-09
Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 132 NRTCQASEFRC--GNNRCIPNHWQCDGEFDCSDKSDE 166
+ TC++ +F C NRCIP W+CDG+ DC + SDE
Sbjct: 2 SVTCKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDE 38
Score = 44.4 bits (105), Expect = 5e-07
Identities = 18/36 (50%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Query: 56 NSTMFRCTG--GMCIPSTWVCDGQNDCPDGVDEKKC 89
S F C G CIP W CDGQ DC +G DE+ C
Sbjct: 6 KSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDEQGC 41
Score = 44.4 bits (105), Expect = 5e-07
Identities = 18/36 (50%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Query: 228 NSTMFRCTG--GMCIPSTWVCDGQNDCPDGVDEKKC 261
S F C G CIP W CDGQ DC +G DE+ C
Sbjct: 6 KSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDEQGC 41
Score = 30.9 bits (70), Expect = 0.033
Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Query: 302 VKCTAGQFTCQNLT-ACIPDKWVCDGD 327
V C +G F+C CIP W CDG
Sbjct: 3 VTCKSGDFSCGGRVNRCIPQFWRCDGQ 29
>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor,
different EGF domains {Human (Homo sapiens) [TaxId:
9606]}
Length = 41
Score = 52.1 bits (125), Expect = 1e-09
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 389 VDECAKDNGGCLHKCVDLPVGYMCECNEGYKLSSNRHTCIDI 430
+DEC D C CV+L GY C+C EG++L + C +
Sbjct: 1 IDECQ-DPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAV 41
Score = 47.0 bits (112), Expect = 6e-08
Identities = 22/41 (53%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Query: 430 IDECETPGSCSQICLNEKGGFKCECVAGYIKDPHHPTQCKA 470
IDEC+ P +CSQ+C+N +GG+KC+C G+ DPH CKA
Sbjct: 1 IDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKA-CKA 40
Score = 31.6 bits (72), Expect = 0.019
Identities = 12/45 (26%), Positives = 16/45 (35%), Gaps = 7/45 (15%)
Query: 174 VNHCAAVNGHCSHLCLPAPQINAHSPKISCACPEGLKLLPDLLMC 218
++ C CS LC+ C C EG +L P C
Sbjct: 1 IDECQ-DPDTCSQLCVNLEG------GYKCQCEEGFQLDPHTKAC 38
>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 43
Score = 52.2 bits (125), Expect = 1e-09
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 389 VDECAKDNGGCLHKCVDLPVGYMCECNEGYKLSSNRHTCID 429
V+EC CV+ P Y+C+C ++L+ R C+D
Sbjct: 3 VNECLDPTTCISGNCVNTPGSYICDCPPDFELNPTRVGCVD 43
Score = 39.1 bits (91), Expect = 4e-05
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 429 DIDECETP-GSCSQICLNEKGGFKCECVAGYIKDP 462
D++EC P S C+N G + C+C + +P
Sbjct: 2 DVNECLDPTTCISGNCVNTPGSYICDCPPDFELNP 36
Score = 27.2 bits (60), Expect = 0.79
Identities = 12/45 (26%), Positives = 15/45 (33%), Gaps = 6/45 (13%)
Query: 174 VNHCAAVNGHCSHLCLPAPQINAHSPKISCACPEGLKLLPDLLMC 218
VN C S C+ P C CP +L P + C
Sbjct: 3 VNECLDPTTCISGNCVNTPG------SYICDCPPDFELNPTRVGC 41
>d1rfnb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId:
9606]}
Length = 57
Score = 52.1 bits (125), Expect = 2e-09
Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 392 CAKDNGGCLHKCVDLP-VGYMCECNEGYKLSSNRHTCIDIDEC 433
C NG C C + +C C EGY+L+ N+ +C
Sbjct: 3 CNIKNGRCEQFCKNSADNKVVCSCTEGYRLAENQKSCEPAVPF 45
Score = 42.1 bits (99), Expect = 5e-06
Identities = 15/50 (30%), Positives = 20/50 (40%), Gaps = 5/50 (10%)
Query: 177 CAAVNGHCSHLCLPAPQINAHSPKISCACPEGLKLLPDLLMCAEAGSKPC 226
C NG C C + K+ C+C EG +L + C A PC
Sbjct: 3 CNIKNGRCEQFCKNSADN-----KVVCSCTEGYRLAENQKSCEPAVPFPC 47
Score = 26.7 bits (59), Expect = 1.6
Identities = 9/23 (39%), Positives = 9/23 (39%), Gaps = 1/23 (4%)
Query: 437 GSCSQICLN-EKGGFKCECVAGY 458
G C Q C N C C GY
Sbjct: 8 GRCEQFCKNSADNKVVCSCTEGY 30
>d2gtlo2 g.12.1.1 (O:60-100) Extracellular hemoglobin linker l3
subunit {Common earthworm (Lumbricus terrestris) [TaxId:
6398]}
Length = 41
Score = 51.3 bits (123), Expect = 2e-09
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 264 TCRSDEFTCA--NGNCIQRIWLCDGDDDCKDGSDEKSC 299
+C E C + CI ++++CDG +DC++G DEK C
Sbjct: 2 SCDEHEHQCGGDDPQCISKLFVCDGHNDCRNGEDEKDC 39
Score = 51.0 bits (122), Expect = 2e-09
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 94 CGQEEFTCRSSPGECVPLTWMCDDNPDCSDGSDEKSC 130
C + E C +C+ ++CD + DC +G DEK C
Sbjct: 3 CDEHEHQCGGDDPQCISKLFVCDGHNDCRNGEDEKDC 39
Score = 47.9 bits (114), Expect = 3e-08
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 134 TCQASEFRC--GNNRCIPNHWQCDGEFDCSDKSDE 166
+C E +C + +CI + CDG DC + DE
Sbjct: 2 SCDEHEHQCGGDDPQCISKLFVCDGHNDCRNGEDE 36
Score = 44.4 bits (105), Expect = 5e-07
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 57 STMFRCTG--GMCIPSTWVCDGQNDCPDGVDEKKC 89
+C G CI +VCDG NDC +G DEK C
Sbjct: 5 EHEHQCGGDDPQCISKLFVCDGHNDCRNGEDEKDC 39
Score = 44.4 bits (105), Expect = 5e-07
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 229 STMFRCTG--GMCIPSTWVCDGQNDCPDGVDEKKC 261
+C G CI +VCDG NDC +G DEK C
Sbjct: 5 EHEHQCGGDDPQCISKLFVCDGHNDCRNGEDEKDC 39
Score = 29.4 bits (66), Expect = 0.12
Identities = 8/25 (32%), Positives = 10/25 (40%), Gaps = 1/25 (4%)
Query: 304 CTAGQFTCQNLT-ACIPDKWVCDGD 327
C + C CI +VCDG
Sbjct: 3 CDEHEHQCGGDDPQCISKLFVCDGH 27
>d1k7ba_ g.12.1.1 (A:) soluble Tva ectodomain, sTva47 {Quail
(Coturnix coturnix) [TaxId: 9091]}
Length = 42
Score = 50.3 bits (120), Expect = 4e-09
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 5/41 (12%)
Query: 264 TCRSDEFTCAN-----GNCIQRIWLCDGDDDCKDGSDEKSC 299
+C +F C+ G C + WLCDG DC DG DE C
Sbjct: 1 SCPPGQFRCSEPPGAHGECYPQDWLCDGHPDCDDGRDEWGC 41
Score = 46.8 bits (111), Expect = 8e-08
Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 5/38 (13%)
Query: 134 TCQASEFRCGNN-----RCIPNHWQCDGEFDCSDKSDE 166
+C +FRC C P W CDG DC D DE
Sbjct: 1 SCPPGQFRCSEPPGAHGECYPQDWLCDGHPDCDDGRDE 38
Score = 45.7 bits (108), Expect = 2e-07
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Query: 94 CGQEEFTCRSSP---GECVPLTWMCDDNPDCSDGSDEKSC 130
C +F C P GEC P W+CD +PDC DG DE C
Sbjct: 2 CPPGQFRCSEPPGAHGECYPQDWLCDGHPDCDDGRDEWGC 41
Score = 43.4 bits (102), Expect = 1e-06
Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 5/39 (12%)
Query: 56 NSTMFRCT-----GGMCIPSTWVCDGQNDCPDGVDEKKC 89
FRC+ G C P W+CDG DC DG DE C
Sbjct: 3 PPGQFRCSEPPGAHGECYPQDWLCDGHPDCDDGRDEWGC 41
Score = 43.4 bits (102), Expect = 1e-06
Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 5/39 (12%)
Query: 228 NSTMFRCT-----GGMCIPSTWVCDGQNDCPDGVDEKKC 261
FRC+ G C P W+CDG DC DG DE C
Sbjct: 3 PPGQFRCSEPPGAHGECYPQDWLCDGHPDCDDGRDEWGC 41
Score = 30.6 bits (69), Expect = 0.044
Identities = 11/28 (39%), Positives = 12/28 (42%), Gaps = 4/28 (14%)
Query: 304 CTAGQFTCQNLTA----CIPDKWVCDGD 327
C GQF C C P W+CDG
Sbjct: 2 CPPGQFRCSEPPGAHGECYPQDWLCDGH 29
>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated
serine protease 2, MASP2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 45
Score = 49.9 bits (119), Expect = 7e-09
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Query: 389 VDECAKDNG---GCLHKCVDLPVGYMCECNEGYKLSSNRHTCID 429
+DEC G C H C + G+ C C GY L N+ TC +
Sbjct: 1 IDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTCSE 44
Score = 37.9 bits (88), Expect = 1e-04
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 4/33 (12%)
Query: 430 IDECETP----GSCSQICLNEKGGFKCECVAGY 458
IDEC+ +C C N GGF C C AGY
Sbjct: 1 IDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGY 33
Score = 29.1 bits (65), Expect = 0.19
Identities = 10/48 (20%), Positives = 14/48 (29%), Gaps = 9/48 (18%)
Query: 174 VNHCAAVNGH---CSHLCLPAPQINAHSPKISCACPEGLKLLPDLLMC 218
++ C G C H C C+C G L + C
Sbjct: 1 IDECQVAPGEAPTCDHHCHNHLG------GFYCSCRAGYVLHRNKRTC 42
>d1v9u5_ g.12.1.1 (5:) Very low-density lipoprotein receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 39
Score = 49.5 bits (118), Expect = 8e-09
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 265 CRSDEFTCANGN--CIQRIWLCDGDDDCKDGSDEKSC 299
CR E +C + CI W CDG++DC G DE++C
Sbjct: 1 CRIHEISCGAHSTQCIPVSWRCDGENDCDSGEDEENC 37
Score = 49.5 bits (118), Expect = 8e-09
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 94 CGQEEFTCRSSPGECVPLTWMCDDNPDCSDGSDEKSCKN 132
C E +C + +C+P++W CD DC G DE++C N
Sbjct: 1 CRIHEISCGAHSTQCIPVSWRCDGENDCDSGEDEENCGN 39
Score = 46.8 bits (111), Expect = 7e-08
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 135 CQASEFRCGNN--RCIPNHWQCDGEFDCSDKSDED 167
C+ E CG + +CIP W+CDGE DC DE+
Sbjct: 1 CRIHEISCGAHSTQCIPVSWRCDGENDCDSGEDEE 35
Score = 43.3 bits (102), Expect = 1e-06
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 57 STMFRCTGG--MCIPSTWVCDGQNDCPDGVDEKKC 89
C CIP +W CDG+NDC G DE+ C
Sbjct: 3 IHEISCGAHSTQCIPVSWRCDGENDCDSGEDEENC 37
Score = 43.3 bits (102), Expect = 1e-06
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 229 STMFRCTGG--MCIPSTWVCDGQNDCPDGVDEKKC 261
C CIP +W CDG+NDC G DE+ C
Sbjct: 3 IHEISCGAHSTQCIPVSWRCDGENDCDSGEDEENC 37
Score = 31.0 bits (70), Expect = 0.033
Identities = 10/25 (40%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Query: 304 CTAGQFTCQN-LTACIPDKWVCDGD 327
C + +C T CIP W CDG+
Sbjct: 1 CRIHEISCGAHSTQCIPVSWRCDGE 25
>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 40
Score = 49.0 bits (117), Expect = 1e-08
Identities = 17/40 (42%), Positives = 19/40 (47%)
Query: 429 DIDECETPGSCSQICLNEKGGFKCECVAGYIKDPHHPTQC 468
DIDECE G CS +C N G F+C C T C
Sbjct: 1 DIDECENGGFCSGVCHNLPGTFECICGPDSALAGQIGTDC 40
Score = 39.4 bits (92), Expect = 3e-05
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 389 VDECAKDNGGCLHKCVDLPVGYMCECNEGYKLSSNRHT 426
+DEC + G C C +LP + C C L+ T
Sbjct: 2 IDECE-NGGFCSGVCHNLPGTFECICGPDSALAGQIGT 38
>d2bz6l1 g.3.11.1 (L:90-142) Coagulation factor VIIa {Human (Homo
sapiens) [TaxId: 9606]}
Length = 53
Score = 49.0 bits (117), Expect = 2e-08
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 392 CAKDNGGCLHKCVDLPVG-YMCECNEGYKLSSNRHTCIDIDEC 433
C +NGGC C D C C+EGY L ++ +C E
Sbjct: 2 CVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEY 44
Score = 43.3 bits (102), Expect = 2e-06
Identities = 17/50 (34%), Positives = 19/50 (38%), Gaps = 5/50 (10%)
Query: 177 CAAVNGHCSHLCLPAPQINAHSPKISCACPEGLKLLPDLLMCAEAGSKPC 226
C NG C C + K SC C EG LL D + C PC
Sbjct: 2 CVNENGGCEQYCS-----DHTGTKRSCRCHEGYSLLADGVSCTPTVEYPC 46
Score = 27.5 bits (61), Expect = 0.76
Identities = 10/37 (27%), Positives = 12/37 (32%), Gaps = 2/37 (5%)
Query: 437 GSCSQICLNEKGG-FKCECVAGYIKDPHHPTQCKAAE 472
G C Q C + G C C GY + C
Sbjct: 7 GGCEQYCSDHTGTKRSCRCHEGYSLLADGVS-CTPTV 42
>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 42
Score = 47.9 bits (114), Expect = 3e-08
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 389 VDECAKDNGGCLH-KCVDLPVGYMCECNEGYKLSSNRHTCI 428
+DEC +D C C + Y CEC G++LS N CI
Sbjct: 2 IDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISACI 42
Score = 36.0 bits (83), Expect = 5e-04
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 429 DIDECET-PGSCSQ-ICLNEKGGFKCECVAGYIKDP 462
DIDEC+ P C +C N +G ++CEC G+ P
Sbjct: 1 DIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSP 36
>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated
serine protease 2, MASP2 {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 45
Score = 47.6 bits (113), Expect = 5e-08
Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Query: 389 VDECAKDNGG---CLHKCVDLPVGYMCECNEGYKLSSNRHTCIDI 430
VDEC G C H C + GY C C GY L N+HTC +
Sbjct: 1 VDECRTSLGDSVPCDHYCHNYLGGYYCSCRVGYILHQNKHTCSAL 45
Score = 38.0 bits (88), Expect = 1e-04
Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 5/45 (11%)
Query: 430 IDECETP----GSCSQICLNEKGGFKCECVAGYIKDPHHPTQCKA 470
+DEC T C C N GG+ C C GYI + T C A
Sbjct: 1 VDECRTSLGDSVPCDHYCHNYLGGYYCSCRVGYILHQNKHT-CSA 44
Score = 27.6 bits (61), Expect = 0.50
Identities = 11/48 (22%), Positives = 14/48 (29%), Gaps = 9/48 (18%)
Query: 174 VNHCAAVNG---HCSHLCLPAPQINAHSPKISCACPEGLKLLPDLLMC 218
V+ C G C H C C+C G L + C
Sbjct: 1 VDECRTSLGDSVPCDHYCHNYLG------GYYCSCRVGYILHQNKHTC 42
>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 43
Score = 46.7 bits (111), Expect = 9e-08
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 389 VDECAKDNGGC-LHKCVDLPVGYMCECNEGYKLSSNRHTC 427
+DEC + G C KC++ + C C GY L+ + C
Sbjct: 3 IDECQELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTRVC 42
Score = 36.7 bits (85), Expect = 3e-04
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Query: 429 DIDECETP--GSCSQICLNEKGGFKCECVAGYIKDP 462
DIDEC+ C+N G F+C C GY +
Sbjct: 2 DIDECQELPGLCQGGKCINTFGSFQCRCPTGYYLNE 37
>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo
sapiens) [TaxId: 9606]}
Length = 42
Score = 45.6 bits (108), Expect = 2e-07
Identities = 12/39 (30%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Query: 390 DECA-KDNGGCLHKCVDLPVGYMCECNEGYKLSSNRHTC 427
+EC + C H C + GY C C Y L + C
Sbjct: 1 NECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNC 39
Score = 36.8 bits (85), Expect = 3e-04
Identities = 12/42 (28%), Positives = 14/42 (33%), Gaps = 3/42 (7%)
Query: 431 DECETP--GSCSQICLNEKGGFKCECVAGYIKDPHHPTQCKA 470
+EC CS C N GG+ C C Y C
Sbjct: 1 NECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKN-CGV 41
Score = 26.7 bits (59), Expect = 0.97
Identities = 12/45 (26%), Positives = 14/45 (31%), Gaps = 7/45 (15%)
Query: 175 NHCAAVNGH-CSHLCLPAPQINAHSPKISCACPEGLKLLPDLLMC 218
N C CSH C C+CP L D+ C
Sbjct: 1 NECTDFVDVPCSHFCNNFIG------GYFCSCPPEYFLHDDMKNC 39
>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 43
Score = 45.1 bits (107), Expect = 3e-07
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 426 TCIDIDECET-PGSCSQICLNEKGGFKCECVAGYIKDPHH 464
+ +D+DEC+ C+N G ++CEC GYI +
Sbjct: 1 SAVDMDECKEPDVCKHGQCINTDGSYRCECPFGYILAGNE 40
Score = 42.4 bits (100), Expect = 3e-06
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 389 VDECAKDNGGCLHKCVDLPVGYMCECNEGYKLSSNRHTCID 429
+DEC + + +C++ Y CEC GY L + C+D
Sbjct: 5 MDECKEPDVCKHGQCINTDGSYRCECPFGYIL--AGNECVD 43
>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens)
[TaxId: 9606]}
Length = 53
Score = 44.6 bits (105), Expect = 7e-07
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 8/47 (17%)
Query: 389 VDECAKDNGGCL--------HKCVDLPVGYMCECNEGYKLSSNRHTC 427
+DECA + H C + GY C C GY+L +RH+C
Sbjct: 4 LDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSC 50
Score = 38.0 bits (88), Expect = 1e-04
Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 10/52 (19%)
Query: 428 IDIDECET---------PGSCSQICLNEKGGFKCECVAGYIKDPHHPTQCKA 470
+D+DEC + C +C N GG+ C C GY + C+A
Sbjct: 2 VDLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHS-CQA 52
>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 44
Score = 39.4 bits (92), Expect = 3e-05
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 389 VDECAKDNGGCLH-KCVDLPVGYMCECNEGYKLS-SNRHTCI 428
+DEC C +CV+ P + C+C+EGY+ C+
Sbjct: 3 IDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCM 44
Score = 36.0 bits (83), Expect = 6e-04
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 429 DIDECET-PGSCSQ-ICLNEKGGFKCECVAGYIKDPHHPTQC 468
DIDEC P C + C+N G F+C+C GY C
Sbjct: 2 DIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNC 43
>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein
1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 42
Score = 32.4 bits (74), Expect = 0.010
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Query: 389 VDECAKDNGGCLH--KCVDLPVGYMCECNEGY 418
VDEC+ C H KC++ + C+C +GY
Sbjct: 3 VDECSLGANPCEHAGKCINTLGSFECQCLQGY 34
Score = 29.7 bits (67), Expect = 0.085
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Query: 429 DIDECETPGS-CSQ--ICLNEKGGFKCECVAGY 458
D+DEC + C C+N G F+C+C+ GY
Sbjct: 2 DVDECSLGANPCEHAGKCINTLGSFECQCLQGY 34
>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus
[TaxId: 1280]}
Length = 319
Score = 34.7 bits (78), Expect = 0.033
Identities = 34/246 (13%), Positives = 69/246 (28%), Gaps = 24/246 (9%)
Query: 511 VFRTGMIFWSDISEKKIYKAPIDEGSERTVVIEEDKTIADGLAVD-----WIYSHIYWTD 565
R G +F D+ E I+K + E K + + ++ +
Sbjct: 47 FDRQGQLFLLDVFEGNIFKINPE-TKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKS 105
Query: 566 AHKNTIELANFEGTMRKVLVRSYLDEPRSLALNPIDGWMYWSDWGQNAKIERAGM---DG 622
N + + S + + G+ + G +
Sbjct: 106 TGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPD 165
Query: 623 SHRNMVIVSDIKWPNGLTLDLVQRRLYWVDAKLNEISSCDYNG-------GNRRLVLYSP 675
I+ +I NG+ L ++ L+ + N + + Y
Sbjct: 166 FRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFT 225
Query: 676 QTLSHPFSISTFEDWLYWSDWQQKAIYKANKFTGDNLTAI-------TGVHQTHEPLNSP 728
+D LY + + Q + NK G + I + ++ P P
Sbjct: 226 GHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIP 284
Query: 729 GTNEYV 734
GTN+ +
Sbjct: 285 GTNQLI 290
Score = 32.4 bits (72), Expect = 0.17
Identities = 18/85 (21%), Positives = 31/85 (36%), Gaps = 8/85 (9%)
Query: 532 IDEGSERTVVIEEDKTIAD------GLAVDWIYSHIYWTDAHKNTIELANFEGTMRKVLV 585
I E +T+ E I+ GL D ++ D + I N E K
Sbjct: 19 ISESELQTITAEPWLEISKKGLQLEGLNFDR-QGQLFLLDVFEGNIFKINPETKEIKRPF 77
Query: 586 RSYLDEPRSLALNPIDGWMYWSDWG 610
S+ P ++ ++ DG ++ G
Sbjct: 78 VSHKANPAAIKIHK-DGRLFVCYLG 101
>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 260
Score = 34.1 bits (76), Expect = 0.048
Identities = 13/57 (22%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 556 WIYSHIYWTDAHKNTIELANFEGTMRKVLVRSYLDEPRSLALNPIDGWMYWSDWGQN 612
+Y T+ + N + T VL + L+ P ++A++ D +Y +D G +
Sbjct: 190 DEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDS-DRTVYVADRGND 245
Score = 28.7 bits (62), Expect = 2.5
Identities = 9/51 (17%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Query: 592 PRSLALNPIDGWMYWSDWGQNAKIERAGMDGSHRNMVIVSDIKWPNGLTLD 642
P +A++ G +Y + G ++ + + ++ + + P GL +D
Sbjct: 16 PSGVAVDS-AGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVD 65
Score = 28.7 bits (62), Expect = 2.8
Identities = 21/149 (14%), Positives = 55/149 (36%), Gaps = 6/149 (4%)
Query: 556 WIYSHIYWTDAHKNTIELANFEGTMRKVLVRSYLDEPRSLALNPIDGWMYWSDWGQNAKI 615
+Y D N + + VL + L++P +A++ N ++
Sbjct: 106 DTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVT--DTDNNRV 163
Query: 616 ERAGMDGSHRNMVIVSDIKWPNGLTLDLVQRRLYWVDAKLNEISSCDYNGGNRRLVLYSP 675
+ + +++ ++ +DI P G+ +D N++ ++ ++
Sbjct: 164 VKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNT-NQVVKLLAGSTTSTVLPFTG 222
Query: 676 QTLSHPFSISTFED-WLYWSDWQQKAIYK 703
L+ P +++ D +Y +D + K
Sbjct: 223 --LNTPLAVAVDSDRTVYVADRGNDRVVK 249
>d1a73a_ d.4.1.3 (A:) Intron-encoded homing endonuclease I-PpoI
{Physarum polycephalum [TaxId: 5791]}
Length = 162
Score = 31.2 bits (70), Expect = 0.23
Identities = 22/75 (29%), Positives = 27/75 (36%), Gaps = 13/75 (17%)
Query: 134 TCQASEFRCGNNRCI-PNHWQCDGEFDCSDKSDEDPEMCNGVNHCAAVNGHCSHLCLPAP 192
TC AS C N RC P H E + G N C NG C H +
Sbjct: 92 TCTAS-HLCHNTRCHNPLHLCW-----------ESLDDNKGRNWCPGPNGGCVHAVVCLR 139
Query: 193 QINAHSPKISCACPE 207
Q + P + A P+
Sbjct: 140 QGPLYGPGATVAGPQ 154
>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 27.7 bits (62), Expect = 0.41
Identities = 11/33 (33%), Positives = 14/33 (42%), Gaps = 6/33 (18%)
Query: 389 VDECAKD---NGGCLHKCVDLPVGYMCECNEGY 418
D+C + NGG C D Y C C G+
Sbjct: 3 GDQCESNPCLNGGS---CKDDINSYECWCPFGF 32
Score = 27.3 bits (61), Expect = 0.56
Identities = 9/32 (28%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 428 IDIDECET-PGSCSQICLNEKGGFKCECVAGY 458
+D D+CE+ P C ++ ++C C G+
Sbjct: 1 VDGDQCESNPCLNGGSCKDDINSYECWCPFGF 32
>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein
1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 39
Score = 27.7 bits (62), Expect = 0.48
Identities = 10/33 (30%), Positives = 14/33 (42%), Gaps = 6/33 (18%)
Query: 389 VDECAKD---NGGCLHKCVDLPVGYMCECNEGY 418
V+EC + N C+D + C C GY
Sbjct: 1 VNECVSNPCQNDAT---CLDQIGEFQCICMPGY 30
Score = 24.6 bits (54), Expect = 4.9
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 430 IDECET-PGSCSQICLNEKGGFKCECVAGY 458
++EC + P CL++ G F+C C+ GY
Sbjct: 1 VNECVSNPCQNDATCLDQIGEFQCICMPGY 30
>d1h30a1 b.29.1.4 (A:261-451) Growth-arrest-specific protein Gas6
{Human (Homo sapiens) [TaxId: 9606]}
Length = 191
Score = 30.6 bits (68), Expect = 0.49
Identities = 10/33 (30%), Positives = 13/33 (39%)
Query: 412 CECNEGYKLSSNRHTCIDIDECETPGSCSQICL 444
C+ G KLS + TC DI C +
Sbjct: 2 CDGRGGLKLSQDMDTCEDILPCVPFSVAKSVKS 34
>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens
[TaxId: 358]}
Length = 295
Score = 30.8 bits (68), Expect = 0.51
Identities = 24/162 (14%), Positives = 49/162 (30%), Gaps = 19/162 (11%)
Query: 513 RTGMIFWSDISEKKIYKAPIDEGSERTVVIEEDKTIA-------DGLAVDWIYSHIYWTD 565
+G +W +I E+++++ + S R V + +
Sbjct: 28 ASGTAWWFNILERELHE--LHLASGRKTVHALPFMGSALAKISDSKQLIASDDGLFLRDT 85
Query: 566 AHKNTIELANFEGTMRKVLVRSYLDEPRSLALNPIDGWMYWSDWGQNAKIERAGMDGSHR 625
A A E + P G ++ G+ A+ + +
Sbjct: 86 ATGVLTLHAELESDLPGNRSNDGRMHP--------SGALWIGTMGRKAETGAGSIYHVAK 137
Query: 626 NMV--IVSDIKWPNGLTLDLVQRRLYWVDAKLNEISSCDYNG 665
V + +DI PN + Y+VD K+N + +
Sbjct: 138 GKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDA 179
>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa)
[TaxId: 9823]}
Length = 37
Score = 27.3 bits (61), Expect = 0.56
Identities = 11/33 (33%), Positives = 14/33 (42%), Gaps = 6/33 (18%)
Query: 389 VDECAKD---NGGCLHKCVDLPVGYMCECNEGY 418
D+CA NGG C D Y+C C +
Sbjct: 2 GDQCASSPCQNGGS---CKDQLQSYICFCLPAF 31
Score = 26.6 bits (59), Expect = 1.2
Identities = 7/31 (22%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 429 DIDECET-PGSCSQICLNEKGGFKCECVAGY 458
D D+C + P C ++ + C C+ +
Sbjct: 1 DGDQCASSPCQNGGSCKDQLQSYICFCLPAF 31
>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo
sapiens) [TaxId: 9606]}
Length = 39
Score = 27.3 bits (61), Expect = 0.57
Identities = 11/32 (34%), Positives = 13/32 (40%), Gaps = 6/32 (18%)
Query: 390 DECAKD---NGGCLHKCVDLPVGYMCECNEGY 418
D+C N G C D Y C C EG+
Sbjct: 1 DQCETSPCQNQGK---CKDGLGEYTCTCLEGF 29
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 279
Score = 29.6 bits (65), Expect = 1.4
Identities = 28/179 (15%), Positives = 57/179 (31%), Gaps = 8/179 (4%)
Query: 551 GLAVDWIYSHIYWTDAHKNTIELANFEGTMRK-----VLVRSYLDEPRSLALNPIDGWMY 605
G+AV+ + I D + + I++ + EG + S L P +A+ G +
Sbjct: 27 GVAVNA-QNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDII 85
Query: 606 WSDWGQNAKIERAGMDGSHRNMVIVSDIKWPNGLTLDLVQRRLYWVDAKLNEISSCDYNG 665
++ +I+ G + ++ P + + + V
Sbjct: 86 VTERSPTHQIQIYNQYGQFVRKFGATILQHPR--GVTVDNKGRIIVVECKVMRVIIFDQN 143
Query: 666 GNRRLVLYSPQTLSHPFSISTFEDWLYWSDWQQKAIYKANKFTGDNLTAITGVHQTHEP 724
GN + L P + + + + K + G L I G T+ P
Sbjct: 144 GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGITNYP 202
>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein
1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 35
Score = 26.2 bits (58), Expect = 1.5
Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 6/32 (18%)
Query: 390 DECAKD---NGGCLHKCVDLPVGYMCECNEGY 418
DECA + G +C+D + CEC G+
Sbjct: 1 DECASSPCLHNG---RCLDKINEFQCECPTGF 29
>g1rtf.1 b.47.1.2 (A:,B:) Two-chain tissue plasminogen activator
(TC)-T-PA {Human (Homo sapiens) [TaxId: 9606]}
Length = 260
Score = 29.0 bits (63), Expect = 2.1
Identities = 33/183 (18%), Positives = 50/183 (27%), Gaps = 11/183 (6%)
Query: 228 NSTMFRCTGGMCIPSTWV-----CDGQNDCPDGVDEKKCHETCRSDEFTCANGNCIQRIW 282
F C GG+ I S W+ C + P + + I
Sbjct: 34 PGERFLC-GGILISSCWILSAAHCFQERFPPHHLTVILGRTYRVVPGEEEQKFEVEKYIV 92
Query: 283 LCDGDDDCKDGSDEKSCQPVKCTA-GQFTCQNLTACIPDKWVCDGD----TVEKDSTCPN 337
+ DDD D + Q + T C+P + D +
Sbjct: 93 HKEFDDDTYDNDIALLQLKSDSSRCAQESSVVRTVCLPPADLQLPDWTECELSGYGKHEA 152
Query: 338 ATPMNSSVRIEGAVAFIPPGFAMAMKIVRTAVCDKHPDCPLMQDEDPTKCGVDECAKDNG 397
+P S E V P + ++ V D + P D C D+G
Sbjct: 153 LSPFYSERLKEAHVRLYPSSRCTSQHLLNRTVTDNMLCAGDTRSGGPQANLHDACQGDSG 212
Query: 398 GCL 400
G L
Sbjct: 213 GPL 215
>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 40
Score = 25.6 bits (56), Expect = 2.3
Identities = 11/40 (27%), Positives = 15/40 (37%), Gaps = 4/40 (10%)
Query: 392 CAKDNGGCLHK--CVDLPVGYMCECNEGYKLSSNRHTCID 429
CA + C C D G+ C C Y + N C+
Sbjct: 2 CANNRHQCSVHAECRDYATGFCCRCVANY--TGNGRQCVA 39
Score = 24.8 bits (54), Expect = 5.0
Identities = 8/23 (34%), Positives = 10/23 (43%)
Query: 442 ICLNEKGGFKCECVAGYIKDPHH 464
C + GF C CVA Y +
Sbjct: 14 ECRDYATGFCCRCVANYTGNGRQ 36
>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase
{Chlorobium tepidum [TaxId: 1097]}
Length = 240
Score = 28.2 bits (62), Expect = 3.1
Identities = 17/102 (16%), Positives = 26/102 (25%), Gaps = 5/102 (4%)
Query: 123 DGSDEKSCKNRTCQASEFRCGNNRCIPNHWQCDGEFDCSDKSDEDPEMCNGVNHCAAVNG 182
D SD + T E R G+ C+ N+ SD ++ED + N
Sbjct: 65 DISDMADVRRLTTHIVE-RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTF-- 121
Query: 183 HCSHLCLPAPQINAHSPKISCACPEGLKLLPDLLMCAEAGSK 224
+ + K SK
Sbjct: 122 FLTQALFALMERQHSGHIFFITSVAATKAFRH--SSIYCMSK 161
>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit
(Oryctolagus cuniculus) [TaxId: 9986]}
Length = 340
Score = 27.8 bits (61), Expect = 4.4
Identities = 8/66 (12%), Positives = 21/66 (31%)
Query: 628 VIVSDIKWPNGLTLDLVQRRLYWVDAKLNEISSCDYNGGNRRLVLYSPQTLSHPFSISTF 687
V+ + NG+ + + +Y + ++I + + L + +IS
Sbjct: 200 VVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVD 259
Query: 688 EDWLYW 693
Sbjct: 260 PVTGDL 265
>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 39
Score = 24.9 bits (54), Expect = 5.1
Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 431 DECETPGSCSQ-ICLNEKGGFKCECVAGYIKDP 462
DEC C C N GGF+C C G+ P
Sbjct: 2 DECSVGNPCGNGTCKNVIGGFECTCEEGFEPGP 34
>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum
islandicum [TaxId: 2277]}
Length = 242
Score = 27.5 bits (60), Expect = 5.5
Identities = 16/147 (10%), Positives = 42/147 (28%), Gaps = 9/147 (6%)
Query: 237 GMCIPSTWVCDGQNDCPDGVDEKKCHETCRSDEFTCANGNCIQRIWLCDGDDDCKDGSDE 296
G + + +G +G++ + + + L D+ + +
Sbjct: 54 GAKVIAVSDINGVAYRKEGLNVELIQKNKGL--------TGPALVELFTTKDNAEFVKNP 105
Query: 297 KSCQPVKCTAGQFTCQNLTACIPDKWVCDGDTVEKDSTCPNATPMNSSVRIEGAVAFIPP 356
+ + + + V + + P TP + E V +P
Sbjct: 106 DAIFKLDVDIFVPAAIENVIRGDNAGLVKARLVVEGANGPT-TPEAERILYERGVVVVPD 164
Query: 357 GFAMAMKIVRTAVCDKHPDCPLMQDED 383
A A ++ + + + DE+
Sbjct: 165 ILANAGGVIMSYLEWVENLQWYIWDEE 191
>d1h0hb_ d.58.1.5 (B:) Tungsten containing formate dehydrogenase,
small subunit {Desulfovibrio gigas [TaxId: 879]}
Length = 214
Score = 26.8 bits (58), Expect = 8.6
Identities = 12/91 (13%), Positives = 21/91 (23%), Gaps = 1/91 (1%)
Query: 353 FIPPGFAMAMKIVRTAVCDKHPDCPLMQDEDPTKCGVDECAKDNGGCLHKCVDLPVGYMC 412
F P + A D + ++ D+ KD + +
Sbjct: 67 FFPDQCRHCIAPPCKATADMEDESAIIHDDATGCVLFTPKTKDLEDY-ESVISACPYDVP 125
Query: 413 ECNEGYKLSSNRHTCIDIDECETPGSCSQIC 443
+ CID +C C
Sbjct: 126 RKVAESNQMAKCDMCIDRITNGLRPACVTSC 156
>d1rcua_ c.129.1.1 (A:) Hypothetical protein TM1055 {Thermotoga
maritima [TaxId: 2336]}
Length = 170
Score = 26.2 bits (57), Expect = 9.4
Identities = 5/33 (15%), Positives = 11/33 (33%)
Query: 600 IDGWMYWSDWGQNAKIERAGMDGSHRNMVIVSD 632
+ G W+D I+ +D + +
Sbjct: 126 LRGTGGWTDRISQVLIDGKYLDNRRIVEIHQAW 158
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.136 0.459
Gapped
Lambda K H
0.267 0.0376 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 3,052,658
Number of extensions: 161752
Number of successful extensions: 922
Number of sequences better than 10.0: 1
Number of HSP's gapped: 757
Number of HSP's successfully gapped: 306
Length of query: 734
Length of database: 2,407,596
Length adjustment: 92
Effective length of query: 642
Effective length of database: 1,144,436
Effective search space: 734727912
Effective search space used: 734727912
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.3 bits)