BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8877
(180 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q58CV6|KLDC3_BOVIN Kelch domain-containing protein 3 OS=Bos taurus GN=KLHDC3 PE=2 SV=2
Length = 382
Score = 127 bits (320), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 96/182 (52%), Gaps = 14/182 (7%)
Query: 13 RVNHAAVLNDNKIFTFGGY-----CSGEDYVKRRP---------MDGEPPSYRDFHTANI 58
R H+A + ++ FGGY C D K G P +RDFH+A +
Sbjct: 128 RDGHSACVLGKTMYIFGGYEQLADCFSNDIHKLDTSTMTWTLICTKGNPARWRDFHSATM 187
Query: 59 IDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVY 118
+ MY++GGR D +HS +E+YC + D + W+ T +P GRRSHSAF Y
Sbjct: 188 LGSHMYVFGGRADRFGPFHSNNEIYCNRIRVFDTRTEAWLDCPPTPVLPEGRRSHSAFGY 247
Query: 119 GDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPHGAPPTKRRRQSCIIKGDTLIMFG 178
LYIFGGYN + H++D++++ W ++ P G P RRRQ C I GD +++FG
Sbjct: 248 NGELYIFGGYNARLNRHFHDLWKFNPVSFTWKKIEPKGKGPCPRRRQCCCIVGDKIVLFG 307
Query: 179 GS 180
G+
Sbjct: 308 GT 309
Score = 123 bits (309), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 74/204 (36%), Positives = 99/204 (48%), Gaps = 33/204 (16%)
Query: 1 MHWTVHLTGGPRRVNHAAVLNDNKIFTFGGYCSGEDYVKRRPMD---------------- 44
+ WTVHL GGPRRVNHAAV +++++FGGYCSGEDY R +D
Sbjct: 2 LRWTVHLEGGPRRVNHAAVAVGHRVYSFGGYCSGEDYETLRQIDVHIFNAVSLRWTKLPP 61
Query: 45 ------GEPPS---YRDFHTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYF 95
G+ P R H+ +ID +++WGGR D +E C L D+
Sbjct: 62 VRPAARGQAPVVPYMRYGHSTVLIDDTVFLWGGRND--------TEGACNVLYAFDVNTH 113
Query: 96 TWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPH 155
W P +G+VP R HSA V G +YIFGGY L + NDI++ T W +
Sbjct: 114 KWSTPRVSGTVPGARDGHSACVLGKTMYIFGGYEQLADCFSNDIHKLDTSTMTWTLICTK 173
Query: 156 GAPPTKRRRQSCIIKGDTLIMFGG 179
G P R S + G + +FGG
Sbjct: 174 GNPARWRDFHSATMLGSHMYVFGG 197
>sp|Q9BQ90|KLDC3_HUMAN Kelch domain-containing protein 3 OS=Homo sapiens GN=KLHDC3 PE=2
SV=1
Length = 382
Score = 127 bits (318), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 96/182 (52%), Gaps = 14/182 (7%)
Query: 13 RVNHAAVLNDNKIFTFGGY-----CSGEDYVKRRP---------MDGEPPSYRDFHTANI 58
R H+A + ++ FGGY C D K G P +RDFH+A +
Sbjct: 128 RDGHSACVLGKIMYIFGGYEQQADCFSNDIHKLDTSTMTWTLICTKGSPARWRDFHSATM 187
Query: 59 IDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVY 118
+ MY++GGR D +HS +E+YC + D + W+ T +P GRRSHSAF Y
Sbjct: 188 LGSHMYVFGGRADRFGPFHSNNEIYCNRIRVFDTRTEAWLDCPPTPVLPEGRRSHSAFGY 247
Query: 119 GDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPHGAPPTKRRRQSCIIKGDTLIMFG 178
LYIFGGYN + H++D++++ W ++ P G P RRRQ C I GD +++FG
Sbjct: 248 NGELYIFGGYNARLNRHFHDLWKFNPVSFTWKKIEPKGKGPCPRRRQCCCIVGDKIVLFG 307
Query: 179 GS 180
G+
Sbjct: 308 GT 309
Score = 121 bits (303), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 98/204 (48%), Gaps = 33/204 (16%)
Query: 1 MHWTVHLTGGPRRVNHAAVLNDNKIFTFGGYCSGEDYVKRRPMD---------------- 44
+ WTVHL GGPRRVNHAAV +++++FGGYCSGEDY R +D
Sbjct: 2 LRWTVHLEGGPRRVNHAAVAVGHRVYSFGGYCSGEDYETLRQIDVHIFNAVSLRWTKLPP 61
Query: 45 ------GEPPS---YRDFHTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYF 95
G+ P R H+ +ID + +WGGR D +E C L D+
Sbjct: 62 VKSAIRGQAPVVPYMRYGHSTVLIDDTVLLWGGRND--------TEGACNVLYAFDVNTH 113
Query: 96 TWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPH 155
W P +G+VP R HSA V G +YIFGGY + NDI++ T W +
Sbjct: 114 KWFTPRVSGTVPGARDGHSACVLGKIMYIFGGYEQQADCFSNDIHKLDTSTMTWTLICTK 173
Query: 156 GAPPTKRRRQSCIIKGDTLIMFGG 179
G+P R S + G + +FGG
Sbjct: 174 GSPARWRDFHSATMLGSHMYVFGG 197
>sp|Q8VEM9|KLDC3_MOUSE Kelch domain-containing protein 3 OS=Mus musculus GN=Klhdc3 PE=2
SV=1
Length = 382
Score = 126 bits (316), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 96/182 (52%), Gaps = 14/182 (7%)
Query: 13 RVNHAAVLNDNKIFTFGGY-----CSGEDYVKRRP---------MDGEPPSYRDFHTANI 58
R H+A + ++ FGGY C D K G P +RDFH+A +
Sbjct: 128 RDGHSACVLGKIMYIFGGYEQLADCFSNDIHKLDTSTMTWTLVCTKGNPARWRDFHSATM 187
Query: 59 IDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVY 118
+ MY++GGR D +HS +E+YC + D + W+ T +P GRRSHSAF Y
Sbjct: 188 LGNHMYVFGGRADRFGPFHSNNEIYCNRIRVFDTRTEAWLDCPHTPVLPEGRRSHSAFGY 247
Query: 119 GDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPHGAPPTKRRRQSCIIKGDTLIMFG 178
LYIFGGYN + H++D++++ W ++ P G P RRRQ C I GD +++FG
Sbjct: 248 NGELYIFGGYNARLNRHFHDLWKFNPGSFTWKKIEPKGKGPCPRRRQCCCIVGDKIVLFG 307
Query: 179 GS 180
G+
Sbjct: 308 GT 309
Score = 124 bits (310), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 100/204 (49%), Gaps = 33/204 (16%)
Query: 1 MHWTVHLTGGPRRVNHAAVLNDNKIFTFGGYCSGEDYVKRRPMD---------------- 44
+ WTVHL GGPRRVNHAAV +++++FGGYCSGEDY R +D
Sbjct: 2 LRWTVHLEGGPRRVNHAAVAVGHRVYSFGGYCSGEDYETLRQIDVHIFNAVSLRWTKLPP 61
Query: 45 ------GEPPS---YRDFHTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYF 95
G+ P R H+ +ID +++WGGR D +E C L D+
Sbjct: 62 VRPAVRGQAPVVPYMRYGHSTVLIDDTVFLWGGRND--------TEGACNVLYAFDVNTH 113
Query: 96 TWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPH 155
W P +G+VP R HSA V G +YIFGGY L + NDI++ T W V
Sbjct: 114 KWSTPRVSGTVPGARDGHSACVLGKIMYIFGGYEQLADCFSNDIHKLDTSTMTWTLVCTK 173
Query: 156 GAPPTKRRRQSCIIKGDTLIMFGG 179
G P R S + G+ + +FGG
Sbjct: 174 GNPARWRDFHSATMLGNHMYVFGG 197
>sp|Q6AYI2|KLDC3_RAT Kelch domain-containing protein 3 OS=Rattus norvegicus GN=Klhdc3
PE=2 SV=1
Length = 382
Score = 126 bits (316), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 96/182 (52%), Gaps = 14/182 (7%)
Query: 13 RVNHAAVLNDNKIFTFGGY-----CSGEDYVKRRP---------MDGEPPSYRDFHTANI 58
R H+A + ++ FGGY C D K G P +RDFH+A +
Sbjct: 128 RDGHSACVLGKIMYIFGGYEQLADCFSNDIHKLDTSTMTWTLVCTKGNPARWRDFHSATM 187
Query: 59 IDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVY 118
+ MY++GGR D +HS +E+YC + D + W+ T +P GRRSHSAF Y
Sbjct: 188 LGNHMYVFGGRADRFGPFHSNNEIYCNRIRVFDTRTEAWLDCPHTPVLPEGRRSHSAFGY 247
Query: 119 GDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPHGAPPTKRRRQSCIIKGDTLIMFG 178
LYIFGGYN + H++D++++ W ++ P G P RRRQ C I GD +++FG
Sbjct: 248 NGELYIFGGYNARLNRHFHDLWKFNPGSFTWKKIEPKGKGPCPRRRQCCCIVGDKIVLFG 307
Query: 179 GS 180
G+
Sbjct: 308 GT 309
Score = 124 bits (310), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 100/204 (49%), Gaps = 33/204 (16%)
Query: 1 MHWTVHLTGGPRRVNHAAVLNDNKIFTFGGYCSGEDYVKRRPMD---------------- 44
+ WTVHL GGPRRVNHAAV +++++FGGYCSGEDY R +D
Sbjct: 2 LRWTVHLEGGPRRVNHAAVAVGHRVYSFGGYCSGEDYETLRQIDVHIFNAVSLRWTKLPP 61
Query: 45 ------GEPPS---YRDFHTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYF 95
G+ P R H+ +ID +++WGGR D +E C L D+
Sbjct: 62 VRPAVRGQAPVVPYMRYGHSTVLIDDTVFLWGGRND--------TEGACNVLYAFDVNTH 113
Query: 96 TWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPH 155
W P +G+VP R HSA V G +YIFGGY L + NDI++ T W V
Sbjct: 114 KWSTPRVSGTVPGARDGHSACVLGKIMYIFGGYEQLADCFSNDIHKLDTSTMTWTLVCTK 173
Query: 156 GAPPTKRRRQSCIIKGDTLIMFGG 179
G P R S + G+ + +FGG
Sbjct: 174 GNPARWRDFHSATMLGNHMYVFGG 197
>sp|P80197|AFK_PHYPO Actin-fragmin kinase OS=Physarum polycephalum PE=1 SV=2
Length = 737
Score = 80.9 bits (198), Expect = 4e-15, Method: Composition-based stats.
Identities = 58/182 (31%), Positives = 79/182 (43%), Gaps = 24/182 (13%)
Query: 10 GPRRVNHAAVLNDNKIFTFGGYCSGE--------DYVKRR----PMDGEPPSYRDFHTAN 57
PRR H+ VL + K++ FGG C D+ K++ GE PS R H+A
Sbjct: 418 APRRY-HSGVLYEGKLYVFGGVCIKTASNDFYVFDFAKKKWSIVVAQGEAPSPRCGHSAT 476
Query: 58 IIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTW--IRPNTTGSVPVGRRSHSA 115
+ G+M+I+GG + Y DL D TW I P G P R HSA
Sbjct: 477 VYGGKMWIFGGHNNNKQPY--------SDLYTFDFAKSTWEKIEPTKDGPWPSPRYHHSA 528
Query: 116 FVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPHGAPPTKRRRQSCIIKGDTLI 175
+ G LYIFGG + H ND+Y Y +W + G P R Q + ++L
Sbjct: 529 TLVGASLYIFGGAEHKSKYH-NDVYVYKFDANQWELLNATGETPEPRAGQMTVEWNNSLF 587
Query: 176 MF 177
F
Sbjct: 588 TF 589
Score = 67.0 bits (162), Expect = 6e-11, Method: Composition-based stats.
Identities = 39/137 (28%), Positives = 67/137 (48%), Gaps = 12/137 (8%)
Query: 46 EPPSYRDFHTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGS 105
E P+ R +H+ + +G++Y++GG +++ D D W G
Sbjct: 415 EKPAPRRYHSGVLYEGKLYVFGGVCIKTA---------SNDFYVFDFAKKKWSIVVAQGE 465
Query: 106 VPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIP--HGAPPTKRR 163
P R HSA VYG ++IFGG+N ++ Y+D+Y + + W ++ P G P+ R
Sbjct: 466 APSPRCGHSATVYGGKMWIFGGHNN-NKQPYSDLYTFDFAKSTWEKIEPTKDGPWPSPRY 524
Query: 164 RQSCIIKGDTLIMFGGS 180
S + G +L +FGG+
Sbjct: 525 HHSATLVGASLYIFGGA 541
Score = 51.6 bits (122), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 97 WIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPHG 156
W++ P RR HS +Y LY+FGG ++ ND Y + +++W+ V+ G
Sbjct: 407 WLKVVVPNEKPAPRRYHSGVLYEGKLYVFGGV--CIKTASNDFYVFDFAKKKWSIVVAQG 464
Query: 157 APPTKRRRQSCIIKGDTLIMFGG 179
P+ R S + G + +FGG
Sbjct: 465 EAPSPRCGHSATVYGGKMWIFGG 487
Score = 43.1 bits (100), Expect = 9e-04, Method: Composition-based stats.
Identities = 45/181 (24%), Positives = 70/181 (38%), Gaps = 32/181 (17%)
Query: 3 WTVHLTGGPR---RVNHAAVLNDNKIFTFGGYCSGE---------DYVKRR------PMD 44
W++ + G R H+A + K++ FGG+ + + D+ K D
Sbjct: 457 WSIVVAQGEAPSPRCGHSATVYGGKMWIFGGHNNNKQPYSDLYTFDFAKSTWEKIEPTKD 516
Query: 45 GEPPSYRDFHTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTG 104
G PS R H+A ++ +YI+GG + S YH+ VY D W N TG
Sbjct: 517 GPWPSPRYHHSATLVGASLYIFGG-AEHKSKYHNDVYVYKFDAN-------QWELLNATG 568
Query: 105 SVPVGRRSHSAFVYGDGLYIF------GGYNGLVEEHYNDIYRYCTRRQEWARVIPHGAP 158
P R + + L+ F GGY V+ H +I + + P A
Sbjct: 569 ETPEPRAGQMTVEWNNSLFTFGGHGGEGGYTSFVDAHVFEIATNTFHEVDCSGTFPRTAR 628
Query: 159 P 159
P
Sbjct: 629 P 629
>sp|P87061|TEA1_SCHPO Tip elongation aberrant protein 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=tea1 PE=1 SV=1
Length = 1147
Score = 70.9 bits (172), Expect = 4e-12, Method: Composition-based stats.
Identities = 50/184 (27%), Positives = 79/184 (42%), Gaps = 24/184 (13%)
Query: 13 RVNHAAVLNDNKIFTFGGYCSGEDYVKRRP-----------------MDGEPPSYRDFHT 55
R+ HA++L N FGG + D R+ G PS R HT
Sbjct: 134 RLGHASILIGNAFIVFGGL-TNHDVADRQDNSLYLLNTSSLVWQKANASGARPSGRYGHT 192
Query: 56 ANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSA 115
+ + ++ ++GGR L + +++ C DL L+ W + P R H A
Sbjct: 193 ISCLGSKICLFGGR----LLDYYFNDLVCFDLNNLNTSDSRWELASVVNDPPPARAGHVA 248
Query: 116 FVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPHGAPPTKRRRQSCIIKGDTLI 175
F + D LYIFGG +G +ND++ Y ++ W++V G P R + + L
Sbjct: 249 FTFSDKLYIFGGTDG--ANFFNDLWCYHPKQSAWSKVETFGVAPNPRAGHAASVVEGILY 306
Query: 176 MFGG 179
+FGG
Sbjct: 307 VFGG 310
Score = 45.4 bits (106), Expect = 2e-04, Method: Composition-based stats.
Identities = 41/167 (24%), Positives = 63/167 (37%), Gaps = 27/167 (16%)
Query: 11 PRRVNHAAVLNDNKIFTFGG------------YCSGEDYVKRRPMDGEPPSYRDFHTANI 58
P R H A +K++ FGG Y + + G P+ R H A++
Sbjct: 241 PARAGHVAFTFSDKLYIFGGTDGANFFNDLWCYHPKQSAWSKVETFGVAPNPRAGHAASV 300
Query: 59 IDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVY 118
++G +Y++GGR + + + DL L W + + P R SH+
Sbjct: 301 VEGILYVFGGRASDGTFLN--------DLYAFRLSSKHWYKLSDLPFTPSPRSSHTLSCS 352
Query: 119 GDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPHGAPPTKRRRQ 165
G L + GG G N +Y T R G+ PT RQ
Sbjct: 353 GLTLVLIGGKQGKGASDSN-VYMLDTSRFRL------GSVPTTSGRQ 392
Score = 37.0 bits (84), Expect = 0.072, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Query: 97 WIRPNTTGSVPV-GRRSHSAFVYGDG---LYIFGGYNGLVEEHYNDIYRYCTRRQEWARV 152
W + GS V R SH++ +Y +G +YIFGG + ND++ ++ +
Sbjct: 66 WSKLTVRGSSNVLPRYSHASHLYAEGGQEIYIFGGVASDSQPK-NDLWVLNLATSQFTSL 124
Query: 153 IPHGAPPTKRRRQSCIIKGDTLIMFGG 179
G P+ R + I+ G+ I+FGG
Sbjct: 125 RSLGETPSPRLGHASILIGNAFIVFGG 151
>sp|Q86L99|GACHH_DICDI Rho GTPase-activating protein gacHH OS=Dictyostelium discoideum
GN=gacHH PE=3 SV=1
Length = 1523
Score = 70.5 bits (171), Expect = 5e-12, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 20/149 (13%)
Query: 40 RRPMDGEPPSYRDFHTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIR 99
R PPS R FH+ ++I+G+ +I+GG + L DL L+++ WI
Sbjct: 313 RSGFRSSPPSARYFHSCSVINGKAFIFGGYNGTTLL---------NDLYILNIESMEWIC 363
Query: 100 PNTTGSVPVGRRSHSAFVYGDGLYIFGGY--------NGLVEEHYNDIYRYCTRRQEWAR 151
P+T G +P R H++ G L+IFGG N + ND+Y + W
Sbjct: 364 PHTKGDLPTPRAGHTSIAIGSRLFIFGGTIEGDPSSSNAHCD---NDLYMFEPELNYWTL 420
Query: 152 VIPHGAPPTKRRRQSCIIKGDTLIMFGGS 180
+ G P+ R C+ +++ GGS
Sbjct: 421 LKTSGTLPSPRTGHVCLPISSKILIIGGS 449
Score = 53.5 bits (127), Expect = 7e-07, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 11/106 (10%)
Query: 47 PPSYRDFHTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSV 106
PP Y H++ + +M+++GG ++ V D+ + ++W +P G
Sbjct: 70 PPIYG--HSSTQVGRKMFVFGGSLQDN--------VQVNDMYQFNTSNYSWSKPRPMGEP 119
Query: 107 PVGRRSHSA-FVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWAR 151
P+ R HSA +Y + + IFGG N + NDI+ + T R W +
Sbjct: 120 PIPRYGHSASLIYDNYILIFGGNNTKSSKPLNDIHIFNTERNSWTK 165
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/147 (27%), Positives = 58/147 (39%), Gaps = 21/147 (14%)
Query: 47 PPSYRDFHTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFT---------- 96
PP+ + H + ++ + G G S +S S P ++ L+
Sbjct: 254 PPTLQQLHLSQLMANGI----GMGGSISNGNSDSPPLTPSMMALESSMLNGFKSPLSLSQ 309
Query: 97 -WIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPH 155
+R S P R HS V +IFGGYNG ND+Y EW + PH
Sbjct: 310 RLLRSGFRSSPPSARYFHSCSVINGKAFIFGGYNGTT--LLNDLYILNIESMEW--ICPH 365
Query: 156 --GAPPTKRRRQSCIIKGDTLIMFGGS 180
G PT R + I G L +FGG+
Sbjct: 366 TKGDLPTPRAGHTSIAIGSRLFIFGGT 392
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 99 RPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEE-HYNDIYRYCTRRQEWARVIPHGA 157
+P+ +GS+P HS+ G +++FGG L + ND+Y++ T W++ P G
Sbjct: 61 KPSVSGSLPPPIYGHSSTQVGRKMFVFGG--SLQDNVQVNDMYQFNTSNYSWSKPRPMGE 118
Query: 158 PPTKRRRQSC-IIKGDTLIMFGGS 180
PP R S +I + +++FGG+
Sbjct: 119 PPIPRYGHSASLIYDNYILIFGGN 142
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 38/137 (27%), Positives = 65/137 (47%), Gaps = 24/137 (17%)
Query: 13 RVNHAAVLNDNKIFTFGGYCS----GEDYVKR-RPMD-------GEPPSYRDFHTANIID 60
R H+ + + K F FGGY + Y+ M+ G+ P+ R HT+ I
Sbjct: 324 RYFHSCSVINGKAFIFGGYNGTTLLNDLYILNIESMEWICPHTKGDLPTPRAGHTSIAIG 383
Query: 61 GRMYIWGG--RGDESSLYHSGSEVYCPDLVYL---DLKYFTWIRPNTTGSVPVGRRSHSA 115
R++I+GG GD SS S +C + +Y+ +L Y+T ++ T+G++P R H
Sbjct: 384 SRLFIFGGTIEGDPSS-----SNAHCDNDLYMFEPELNYWTLLK--TSGTLPSPRTGHVC 436
Query: 116 FVYGDGLYIFGGYNGLV 132
+ I GG + ++
Sbjct: 437 LPISSKILIIGGSDAIL 453
Score = 35.0 bits (79), Expect = 0.25, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 23/110 (20%)
Query: 11 PRRVNHAAVLNDNKIFTFGGY--------------CSGEDYVKRRPMDGEPPSYRDFHTA 56
P H++ K+F FGG S + K RPM GEPP R H+A
Sbjct: 70 PPIYGHSSTQVGRKMFVFGGSLQDNVQVNDMYQFNTSNYSWSKPRPM-GEPPIPRYGHSA 128
Query: 57 NII-DGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGS 105
++I D + I+GG +SS + D+ + + +W +P++ S
Sbjct: 129 SLIYDNYILIFGGNNTKSSKPLN-------DIHIFNTERNSWTKPSSNSS 171
>sp|Q9CQ33|LZTR1_MOUSE Leucine-zipper-like transcriptional regulator 1 OS=Mus musculus
GN=Lztr1 PE=2 SV=2
Length = 837
Score = 68.9 bits (167), Expect = 1e-11, Method: Composition-based stats.
Identities = 51/186 (27%), Positives = 78/186 (41%), Gaps = 22/186 (11%)
Query: 7 LTGGPRRVNHAAVLNDNK--------IFTFGGYCSGEDYVKRRPMDGEPPSYRDFHTANI 58
LTGG R +V D+ FG + + + + P D + R HT
Sbjct: 13 LTGGVRSKVAPSVDFDHSCSDSVEYLTLNFGPFETVHRWRRLPPCDEFVGARRSKHTVVA 72
Query: 59 IDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVY 118
+Y++GG ++ L DL+ D+K +W R TTG+ P R HSA VY
Sbjct: 73 YKDAIYVFGGDNGKTML---------NDLLRFDVKDCSWCRAFTTGTPPAPRYHHSAVVY 123
Query: 119 GDGLYIFGGYNGLVE-----EHYNDIYRYCTRRQEWARVIPHGAPPTKRRRQSCIIKGDT 173
G +++FGGY G + ++ ND++ Y +W G P R + D
Sbjct: 124 GSSMFVFGGYTGDIYSNSNLKNKNDLFEYKFATGQWTEWKIEGRLPVARSAHGATVYSDK 183
Query: 174 LIMFGG 179
L +F G
Sbjct: 184 LWIFAG 189
Score = 61.2 bits (147), Expect = 4e-09, Method: Composition-based stats.
Identities = 51/187 (27%), Positives = 76/187 (40%), Gaps = 23/187 (12%)
Query: 10 GPRRVNHAAVLNDNKIFTFGGYCSGEDYVK-------------RRPMDGEPPSYRDFHTA 56
G RR H V + I+ FGG +G+ + R G PP+ R H+A
Sbjct: 62 GARRSKHTVVAYKDAIYVFGGD-NGKTMLNDLLRFDVKDCSWCRAFTTGTPPAPRYHHSA 120
Query: 57 NIIDGRMYIWGG-RGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSA 115
+ M+++GG GD +Y + + DL W G +PV R +H A
Sbjct: 121 VVYGSSMFVFGGYTGD---IYSNSNLKNKNDLFEYKFATGQWTEWKIEGRLPVARSAHGA 177
Query: 116 FVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQE---WARVIPHGAPPTKRRRQSCIIKGD 172
VY D L+IF GY+G ND++ + +E W V G P + D
Sbjct: 178 TVYSDKLWIFAGYDG--NARLNDMWTIGLQDRELTCWEEVAQSGEIPPSCCNFPVAVCRD 235
Query: 173 TLIMFGG 179
+ +F G
Sbjct: 236 KMFVFSG 242
Score = 30.8 bits (68), Expect = 4.5, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 6/53 (11%)
Query: 106 VPVGRRSHSAFVYGDGLYIFGGY------NGLVEEHYNDIYRYCTRRQEWARV 152
+P GR H+A V D +YIFGG +G + Y CT +++ R+
Sbjct: 381 LPSGRLFHAAAVISDAMYIFGGTVDNNIRSGEMYRFQFSCYPKCTLHEDYGRL 433
>sp|Q8N653|LZTR1_HUMAN Leucine-zipper-like transcriptional regulator 1 OS=Homo sapiens
GN=LZTR1 PE=2 SV=2
Length = 840
Score = 68.9 bits (167), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/159 (27%), Positives = 69/159 (43%), Gaps = 14/159 (8%)
Query: 26 FTFGGYCSGEDYVKRRPMDGEPPSYRDFHTANIIDGRMYIWGGRGDESSLYHSGSEVYCP 85
FG + + + + P D + R HT +Y++GG ++ L
Sbjct: 43 LNFGPFETVHRWRRLPPCDEFVGARRSKHTVVAYKDAIYVFGGDNGKTML---------N 93
Query: 86 DLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVE-----EHYNDIY 140
DL+ D+K +W R TTG+ P R HSA VYG +++FGGY G + ++ ND++
Sbjct: 94 DLLRFDVKDCSWCRAFTTGTPPAPRYHHSAVVYGSSMFVFGGYTGDIYSNSNLKNKNDLF 153
Query: 141 RYCTRRQEWARVIPHGAPPTKRRRQSCIIKGDTLIMFGG 179
Y +W G P R + D L +F G
Sbjct: 154 EYKFATGQWTEWKIEGRLPVARSAHGATVYSDKLWIFAG 192
Score = 61.2 bits (147), Expect = 4e-09, Method: Composition-based stats.
Identities = 51/187 (27%), Positives = 76/187 (40%), Gaps = 23/187 (12%)
Query: 10 GPRRVNHAAVLNDNKIFTFGGYCSGEDYVK-------------RRPMDGEPPSYRDFHTA 56
G RR H V + I+ FGG +G+ + R G PP+ R H+A
Sbjct: 65 GARRSKHTVVAYKDAIYVFGGD-NGKTMLNDLLRFDVKDCSWCRAFTTGTPPAPRYHHSA 123
Query: 57 NIIDGRMYIWGG-RGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSA 115
+ M+++GG GD +Y + + DL W G +PV R +H A
Sbjct: 124 VVYGSSMFVFGGYTGD---IYSNSNLKNKNDLFEYKFATGQWTEWKIEGRLPVARSAHGA 180
Query: 116 FVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQE---WARVIPHGAPPTKRRRQSCIIKGD 172
VY D L+IF GY+G ND++ + +E W V G P + D
Sbjct: 181 TVYSDKLWIFAGYDG--NARLNDMWTIGLQDRELTCWEEVAQSGEIPPSCCNFPVAVCRD 238
Query: 173 TLIMFGG 179
+ +F G
Sbjct: 239 KMFVFSG 245
Score = 32.3 bits (72), Expect = 1.6, Method: Composition-based stats.
Identities = 43/172 (25%), Positives = 61/172 (35%), Gaps = 35/172 (20%)
Query: 7 LTGGP----RRVNHAAVLNDNKIFTFGGYCSGEDYVKRRPMDGEPPSYR-DFHTANIIDG 61
L G P RR H V D ++ FGG + E Y DF T ++
Sbjct: 274 LRGSPPPPQRRYGHTMVAFDRHLYVFGGAADNT-------LPNELHCYDVDFQTWEVVQP 326
Query: 62 RMYIWGGRGDESSLYHSGSEVYCPDLVY--------------LDLKYFTWIRPNTTGS-V 106
G + + EV P L Y LD + +P S +
Sbjct: 327 SSDSEVGGAEVPERACASEEV--PTLTYEERVGFKKSRDVFGLDFGTTSAKQPTQPASEL 384
Query: 107 PVGRRSHSAFVYGDGLYIFGGY------NGLVEEHYNDIYRYCTRRQEWARV 152
P GR H+A V D +YIFGG +G + Y CT +++ R+
Sbjct: 385 PSGRLFHAAAVISDAMYIFGGTVDNNIRSGEMYRFQFSCYPKCTLHEDYGRL 436
>sp|Q5R4Q7|LZTR1_PONAB Leucine-zipper-like transcriptional regulator 1 OS=Pongo abelii
GN=LZTR1 PE=2 SV=1
Length = 840
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/159 (27%), Positives = 69/159 (43%), Gaps = 14/159 (8%)
Query: 26 FTFGGYCSGEDYVKRRPMDGEPPSYRDFHTANIIDGRMYIWGGRGDESSLYHSGSEVYCP 85
FG + + + + P D + R HT +Y++GG ++ L
Sbjct: 43 LNFGPFETVHRWRRLPPCDEFVGARRSKHTVVAYKDAIYVFGGDNGKTML---------N 93
Query: 86 DLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVE-----EHYNDIY 140
DL+ D+K +W R TTG+ P R HSA VYG +++FGGY G + ++ ND++
Sbjct: 94 DLLRFDVKDCSWCRAFTTGTPPAPRYHHSAVVYGSSMFVFGGYAGDIYSNSNLKNKNDLF 153
Query: 141 RYCTRRQEWARVIPHGAPPTKRRRQSCIIKGDTLIMFGG 179
Y +W G P R + D L +F G
Sbjct: 154 EYKFATGQWTEWKIEGRLPVARSAHGATVYSDKLWIFAG 192
Score = 63.5 bits (153), Expect = 7e-10, Method: Composition-based stats.
Identities = 49/186 (26%), Positives = 76/186 (40%), Gaps = 21/186 (11%)
Query: 10 GPRRVNHAAVLNDNKIFTFGGYCSGEDYVK-------------RRPMDGEPPSYRDFHTA 56
G RR H V + I+ FGG +G+ + R G PP+ R H+A
Sbjct: 65 GARRSKHTVVAYKDAIYVFGGD-NGKTMLNDLLRFDVKDCSWCRAFTTGTPPAPRYHHSA 123
Query: 57 NIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAF 116
+ M+++GG + +Y + + DL W G +PV R +H A
Sbjct: 124 VVYGSSMFVFGGYAGD--IYSNSNLKNKNDLFEYKFATGQWTEWKIEGRLPVARSAHGAT 181
Query: 117 VYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQE---WARVIPHGAPPTKRRRQSCIIKGDT 173
VY D L+IF GY+G ND++ + +E W V G P ++ D
Sbjct: 182 VYSDKLWIFAGYDG--NARLNDMWTIGLQDRELTCWEEVAQSGEIPPSCCNFPVAVRRDK 239
Query: 174 LIMFGG 179
+ +F G
Sbjct: 240 MFVFSG 245
Score = 31.6 bits (70), Expect = 2.9, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
Query: 86 DLVYLDLKYFTWIRPNTTGS-VPVGRRSHSAFVYGDGLYIFGGY------NGLVEEHYND 138
D+ LD + +P S +P GR H+A V D +YIFGG +G +
Sbjct: 363 DVFGLDFGTTSAKQPAQPASELPSGRLFHAAAVISDAMYIFGGTVDNNIRSGEMYRFQFS 422
Query: 139 IYRYCTRRQEWARV 152
Y CT +++ R+
Sbjct: 423 CYPKCTLHEDYGRL 436
>sp|Q6PDJ6|FBX42_MOUSE F-box only protein 42 OS=Mus musculus GN=Fbxo42 PE=1 SV=1
Length = 717
Score = 66.2 bits (160), Expect = 1e-10, Method: Composition-based stats.
Identities = 47/148 (31%), Positives = 66/148 (44%), Gaps = 16/148 (10%)
Query: 42 PMDGEPPSYRDFHTANIIDGR--MYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIR 99
P G P + R H+A D MY++GG S DL LDL WIR
Sbjct: 110 PYPGTPITQRFSHSACYYDANQSMYVFGG------CTQSSCNAAFNDLWRLDLNSKEWIR 163
Query: 100 PNTTGSVPVGRRSHSAFVYGDGLYIFGGYN-------GLVEEHYNDIYRYCTRRQEWARV 152
P +GS P + + VY D L +FGG+ E +++I+ Y + W +
Sbjct: 164 PLASGSYPSPKAGATLVVYKDLLVLFGGWTRPSPYPLHQPERFFDEIHTYSPSKNWWNCI 223
Query: 153 IPHGAPPTKRRRQSCIIKGDTLIMFGGS 180
+ PP SC+I GD +I+FGGS
Sbjct: 224 VTTHGPPPMAGHSSCVI-GDKMIVFGGS 250
Score = 35.4 bits (80), Expect = 0.18, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 11/87 (12%)
Query: 45 GEPPSYRDFHTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTG 104
G PP H++ +I +M ++GG SL GS ++ LDL+ + W +PN +G
Sbjct: 228 GPPPMAG--HSSCVIGDKMIVFGG-----SL---GSRQMSNEVWVLDLEQWAWSKPNISG 277
Query: 105 SVPVGRRSHSAFVYGD-GLYIFGGYNG 130
P R S V D L I GG G
Sbjct: 278 PSPHPRGGQSQIVIDDTTLLILGGCGG 304
Score = 32.7 bits (73), Expect = 1.2, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 102 TTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPHGAPPTK 161
T G P+ HS+ V GD + +FGG G + N+++ + W++ G P
Sbjct: 226 THGPPPMA--GHSSCVIGDKMIVFGGSLG-SRQMSNEVWVLDLEQWAWSKPNISGPSPHP 282
Query: 162 RRRQSCIIKGD-TLIMFGG 179
R QS I+ D TL++ GG
Sbjct: 283 RGGQSQIVIDDTTLLILGG 301
>sp|Q7M3S9|RNGB_DICDI RING finger protein B OS=Dictyostelium discoideum GN=rngB PE=2 SV=2
Length = 943
Score = 65.9 bits (159), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/131 (30%), Positives = 66/131 (50%), Gaps = 11/131 (8%)
Query: 51 RDFHTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGR 110
R HTA + + ++GG + S Y++ ++ L+ W + G +P R
Sbjct: 128 RAGHTAVVYRQNLVVFGGHNNHKSKYYN-------SVLLFSLESNEWRQQVCGGVIPSAR 180
Query: 111 RSHSAF-VYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPHGAPPTKRRRQSC-I 168
+HS F V + ++IFGGY+G +++YNDIY W +V G PP R S +
Sbjct: 181 ATHSTFQVNNNKMFIFGGYDG--KKYYNDIYYLDLETWIWKKVEAKGTPPKPRSGHSATM 238
Query: 169 IKGDTLIMFGG 179
I+ + L++FGG
Sbjct: 239 IQNNKLMIFGG 249
Score = 50.8 bits (120), Expect = 5e-06, Method: Composition-based stats.
Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 20/146 (13%)
Query: 45 GEPPSYRDFHTANIIDGR---------MYIWGGRGDESSLYHSGSEVYCPDLVYLDL-KY 94
G PS R H+A + + + +GGR S++ +++Y++ +
Sbjct: 62 GNAPSERYGHSAVLYQSQSRPYSDSYQIIFFGGRATSKPF----SDI---NILYVNSNRS 114
Query: 95 FTWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIP 154
F W + TT S+ GR H+A VY L +FGG+N ++YN + + EW + +
Sbjct: 115 FIW-KQVTTKSIE-GRAGHTAVVYRQNLVVFGGHNNHKSKYYNSVLLFSLESNEWRQQVC 172
Query: 155 HGAPPTKRRRQSCI-IKGDTLIMFGG 179
G P+ R S + + + +FGG
Sbjct: 173 GGVIPSARATHSTFQVNNNKMFIFGG 198
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 26/144 (18%)
Query: 13 RVNHAAVLNDNKIFTFGGYCSGEDYV--------------KRRPMDGEPPSYRDFH-TAN 57
R H AV+ + FGG+ + + +++ G PS R H T
Sbjct: 128 RAGHTAVVYRQNLVVFGGHNNHKSKYYNSVLLFSLESNEWRQQVCGGVIPSARATHSTFQ 187
Query: 58 IIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSA-F 116
+ + +M+I+GG + G + Y D+ YLDL+ + W + G+ P R HSA
Sbjct: 188 VNNNKMFIFGG--------YDGKKYY-NDIYYLDLETWIWKKVEAKGTPPKPRSGHSATM 238
Query: 117 VYGDGLYIFGGYNGLVEEHYNDIY 140
+ + L IFGG G NDI+
Sbjct: 239 IQNNKLMIFGGC-GSDSNFLNDIH 261
Score = 37.4 bits (85), Expect = 0.060, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 17/77 (22%)
Query: 11 PRRVNHAAVLNDNKIFTFGGYCSGEDYVKR---RPMDG------EPPSY--------RDF 53
PR + A ++ +NK+ FGG S +++ ++G E PSY R
Sbjct: 230 PRSGHSATMIQNNKLMIFGGCGSDSNFLNDIHILHIEGANEYRWEQPSYLGLEIPQARFR 289
Query: 54 HTANIIDGRMYIWGGRG 70
HT N I GR+YI+ G G
Sbjct: 290 HTTNFIGGRVYIYAGTG 306
>sp|Q5EA50|RABEK_BOVIN Rab9 effector protein with kelch motifs OS=Bos taurus GN=RABEPK
PE=2 SV=1
Length = 372
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 63/138 (45%), Gaps = 13/138 (9%)
Query: 45 GEPPSYRDFHTANI-IDGRMYIWGG--RGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPN 101
G PPS R FHT++ I ++Y++GG RG + V L D TW +P
Sbjct: 133 GPPPSPRTFHTSSAAIGDQLYVFGGGERGAQP--------VQDVQLHVFDANTLTWSQPE 184
Query: 102 TTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPHGAPPTK 161
T G P R H G L+I GG G + Y+D++ +W ++ P GA PT
Sbjct: 185 THGKPPSPRHGHVMVAAGTKLFIHGGLAG--DNFYDDLHCIDISDMKWQKLRPTGAAPTG 242
Query: 162 RRRQSCIIKGDTLIMFGG 179
S + G L +FGG
Sbjct: 243 CAAHSAVAVGKHLYVFGG 260
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 73/175 (41%), Gaps = 27/175 (15%)
Query: 11 PRRVNHAAVLNDNKIFTFGGYCSGEDYVK---------------RRPMDGEPPSYRDFHT 55
PR + ++ ++++ FGG G V+ + G+PPS R H
Sbjct: 138 PRTFHTSSAAIGDQLYVFGGGERGAQPVQDVQLHVFDANTLTWSQPETHGKPPSPRHGHV 197
Query: 56 ANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSA 115
+++I GG ++ + DL +D+ W + TG+ P G +HSA
Sbjct: 198 MVAAGTKLFIHGGLAGDN---------FYDDLHCIDISDMKWQKLRPTGAAPTGCAAHSA 248
Query: 116 FVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPHGAPPTKRRRQS-CII 169
G LY+FGG N +Y+Y +Q W + +PPT R S CII
Sbjct: 249 VAVGKHLYVFGGMTPTGA--LNTMYQYHIEKQHWTLLKFENSPPTGRLDHSMCII 301
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 40/95 (42%), Gaps = 2/95 (2%)
Query: 87 LVYLDLKYFTWIRPNTTGSVPVGRRSH-SAFVYGDGLYIF-GGYNGLVEEHYNDIYRYCT 144
L L+ TW P TG P R H S+ GD LY+F GG G ++ +
Sbjct: 116 LQVLNPDTRTWTTPEVTGPPPSPRTFHTSSAAIGDQLYVFGGGERGAQPVQDVQLHVFDA 175
Query: 145 RRQEWARVIPHGAPPTKRRRQSCIIKGDTLIMFGG 179
W++ HG PP+ R + G L + GG
Sbjct: 176 NTLTWSQPETHGKPPSPRHGHVMVAAGTKLFIHGG 210
>sp|Q6GQN7|RABEK_DANRE Rab9 effector protein with kelch motifs OS=Danio rerio GN=rabepk
PE=2 SV=1
Length = 351
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 72/155 (46%), Gaps = 11/155 (7%)
Query: 26 FTFGGYCSGEDYVKRRPMDGEPPSYRDFHT-ANIIDGRMYIWGGRGDESSLYHSGSEVYC 84
F+ GG G + + + G PPS R +HT + + R++++ G G+ S S V
Sbjct: 126 FSDGG--EGRRFWQSVQVTGVPPSGRTYHTNSACVGNRLFVFSG-GEAGS-----SAVTD 177
Query: 85 PDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCT 144
L D TW +P+TTG+ P R H G +YI GG +G E+ ++D++ T
Sbjct: 178 AQLHVFDAVSVTWTQPDTTGTPPAQRHGHVITAVGSDIYIHGGMSG--EKFHSDMFTLNT 235
Query: 145 RRQEWARVIPHGAPPTKRRRQSCIIKGDTLIMFGG 179
+W +V G P S + + +FGG
Sbjct: 236 ESLKWQKVKAKGDLPPGVAAHSSVTFNKNIFIFGG 270
>sp|Q5RDA9|FBX42_PONAB F-box only protein 42 OS=Pongo abelii GN=FBXO42 PE=2 SV=1
Length = 717
Score = 63.5 bits (153), Expect = 7e-10, Method: Composition-based stats.
Identities = 46/148 (31%), Positives = 65/148 (43%), Gaps = 16/148 (10%)
Query: 42 PMDGEPPSYRDFHTANIIDGR--MYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIR 99
P G P + R H+A D MY++GG S DL LDL WIR
Sbjct: 110 PYPGTPITQRFSHSACYYDANQSMYVFGG------CTQSSCNAAFNDLWRLDLNSKEWIR 163
Query: 100 PNTTGSVPVGRRSHSAFVYGDGLYIFGGYN-------GLVEEHYNDIYRYCTRRQEWARV 152
P +GS P + + VY D L +FGG+ E +++I+ Y + W +
Sbjct: 164 PLASGSYPSPKAGATLVVYKDLLVLFGGWTRPSPYPLHQPERFFDEIHTYSPSKNWWNCI 223
Query: 153 IPHGAPPTKRRRQSCIIKGDTLIMFGGS 180
+ PP SC+I D +I+FGGS
Sbjct: 224 VTTHGPPPMAGHSSCVID-DKMIVFGGS 250
Score = 40.0 bits (92), Expect = 0.009, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 11/87 (12%)
Query: 45 GEPPSYRDFHTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTG 104
G PP H++ +ID +M ++GG SL GS D+ LDL+ + W +PN +G
Sbjct: 228 GPPPMAG--HSSCVIDDKMIVFGG-----SL---GSRQMSNDVWVLDLEQWAWSKPNISG 277
Query: 105 SVPVGRRSHSAFVYGDG-LYIFGGYNG 130
P R S V D + I GG G
Sbjct: 278 PSPHPRGGQSQIVIDDATILILGGCGG 304
>sp|Q6P3S6|FBX42_HUMAN F-box only protein 42 OS=Homo sapiens GN=FBXO42 PE=1 SV=1
Length = 717
Score = 63.5 bits (153), Expect = 7e-10, Method: Composition-based stats.
Identities = 46/148 (31%), Positives = 65/148 (43%), Gaps = 16/148 (10%)
Query: 42 PMDGEPPSYRDFHTANIIDGR--MYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIR 99
P G P + R H+A D MY++GG S DL LDL WIR
Sbjct: 110 PYPGTPITQRFSHSACYYDANQSMYVFGG------CTQSSCNAAFNDLWRLDLNSKEWIR 163
Query: 100 PNTTGSVPVGRRSHSAFVYGDGLYIFGGYN-------GLVEEHYNDIYRYCTRRQEWARV 152
P +GS P + + VY D L +FGG+ E +++I+ Y + W +
Sbjct: 164 PLASGSYPSPKAGATLVVYKDLLVLFGGWTRPSPYPLHQPERFFDEIHTYSPSKNWWNCI 223
Query: 153 IPHGAPPTKRRRQSCIIKGDTLIMFGGS 180
+ PP SC+I D +I+FGGS
Sbjct: 224 VTTHGPPPMAGHSSCVID-DKMIVFGGS 250
Score = 40.0 bits (92), Expect = 0.009, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 11/87 (12%)
Query: 45 GEPPSYRDFHTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTG 104
G PP H++ +ID +M ++GG SL GS D+ LDL+ + W +PN +G
Sbjct: 228 GPPPMAG--HSSCVIDDKMIVFGG-----SL---GSRQMSNDVWVLDLEQWAWSKPNISG 277
Query: 105 SVPVGRRSHSAFVYGDG-LYIFGGYNG 130
P R S V D + I GG G
Sbjct: 278 PSPHPRGGQSQIVIDDATILILGGCGG 304
>sp|Q5ZJ37|RABEK_CHICK Rab9 effector protein with kelch motifs OS=Gallus gallus GN=RABEPK
PE=2 SV=1
Length = 371
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 75/175 (42%), Gaps = 27/175 (15%)
Query: 11 PRRVNHAAVLNDNKIFTFGGYCSGEDYVKRRPMD---------------GEPPSYRDFHT 55
PR + ++ + ++ FGG G + VK + + G+PPS R H
Sbjct: 136 PRTFHTSSAAIGDCLYVFGGGDKGAEPVKDQQLHVFDTVALAWTQPDTHGDPPSPRHGHV 195
Query: 56 ANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSA 115
+ +++I GG +++ DL +D W++ TG VP GR SHS+
Sbjct: 196 VVAVGTKLFIHGGLA---------GDIFYNDLFCIDTTDMKWVKIAATGDVPGGRASHSS 246
Query: 116 FVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPHGAPPTKRRRQS-CII 169
V+ D LYIFGG + + Y+Y Q+W + P R + C+I
Sbjct: 247 AVFKDHLYIFGGIG--PDGTLDTTYKYHIEEQQWTLLQFDSPLPAGRLDHAMCVI 299
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 9/138 (6%)
Query: 43 MDGEPPSYRDFHTANIIDGR-MYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPN 101
+ G PP R FHT++ G +Y++GG GD+ + +++ D V L W +P+
Sbjct: 129 VTGIPPLPRTFHTSSAAIGDCLYVFGG-GDKGAEPVKDQQLHVFDTVAL-----AWTQPD 182
Query: 102 TTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPHGAPPTK 161
T G P R H G L+I GG G + YND++ T +W ++ G P
Sbjct: 183 THGDPPSPRHGHVVVAVGTKLFIHGGLAGDI--FYNDLFCIDTTDMKWVKIAATGDVPGG 240
Query: 162 RRRQSCIIKGDTLIMFGG 179
R S + D L +FGG
Sbjct: 241 RASHSSAVFKDHLYIFGG 258
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 11/120 (9%)
Query: 62 RMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSH-SAFVYGD 120
R++++GG H C + LD + TW P TG P+ R H S+ GD
Sbjct: 98 RLWVFGGA-------HRAGNRSC--VQVLDPEIGTWESPEVTGIPPLPRTFHTSSAAIGD 148
Query: 121 GLYIFGGYNGLVEEHYN-DIYRYCTRRQEWARVIPHGAPPTKRRRQSCIIKGDTLIMFGG 179
LY+FGG + E + ++ + T W + HG PP+ R + G L + GG
Sbjct: 149 CLYVFGGGDKGAEPVKDQQLHVFDTVALAWTQPDTHGDPPSPRHGHVVVAVGTKLFIHGG 208
>sp|Q8W4K1|TYW23_ARATH tRNA wybutosine-synthesizing protein 2/3/4 OS=Arabidopsis thaliana
GN=At4g04670 PE=2 SV=1
Length = 995
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 49/182 (26%), Positives = 75/182 (41%), Gaps = 28/182 (15%)
Query: 13 RVNHAAVLNDNKIFTFGGYC--------------SGEDYVKRRPMDGE-PPSYRDFHTAN 57
R+ H A + + +F GG S ++ +R + E PP +R H A
Sbjct: 325 RLGHTASMVGDFMFVIGGRADPLNILNDVWRLDISTGEWSSQRCVGSEFPPRHR--HAAA 382
Query: 58 IIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFV 117
+ ++YI+GG LY ++ + LD K W G P R SH+
Sbjct: 383 SVGTKVYIFGG------LY---NDKIVSSMHILDTKDLQWKEVEQQGQWPCARHSHAMVA 433
Query: 118 YGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPHGAPPTKRRRQSCIIKGDTLIMF 177
YG ++FGGYNG E ND+Y + + W + G P R S + T+ +
Sbjct: 434 YGSQSFMFGGYNG--ENVLNDLYSFDVQSCSWKLEVISGKWPHARFSHSMFVYKHTIGII 491
Query: 178 GG 179
GG
Sbjct: 492 GG 493
>sp|Q9Y2U9|KLDC2_HUMAN Kelch domain-containing protein 2 OS=Homo sapiens GN=KLHDC2 PE=1
SV=1
Length = 406
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 82/200 (41%), Gaps = 33/200 (16%)
Query: 11 PRRVNHAAVLNDNKIFTFGGYCSGEDYVKRRPMD----------------GEPPSYRDFH 54
P AV D ++ FGG+ S + K +D G PPS +D
Sbjct: 89 PSMSGSCAVCVDRVLYLFGGHHSRGNTNKFYMLDSRSTDRVLQWERIDCQGIPPSSKDKL 148
Query: 55 TANIIDGRMYIWGGRG-------------DESSLYHSGSEVYCPDLVY-LDLKYFTWIRP 100
+ ++ +GG G DE+S ++S D V+ LD + FTW +P
Sbjct: 149 GVWVYKNKLIFFGGYGYLPEDKVLGTFEFDETSFWNSSHPRGWNDHVHILDTETFTWSQP 208
Query: 101 NTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPHGAPPT 160
TTG P R +H+ G+ ++FGG + ND++ EW +IP G P
Sbjct: 209 ITTGKAPSPRAAHACATVGNRGFVFGGR--YRDARMNDLHYLNLDTWEWNELIPQGICPV 266
Query: 161 KRRRQSCI-IKGDTLIMFGG 179
R S + D L +FGG
Sbjct: 267 GRSWHSLTPVSSDHLFLFGG 286
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 8/151 (5%)
Query: 34 GEDYVKRRPMDGEPPSYRDFHTANIIDGR-MYIWGGRGDESSLYHSGSEVYCP--DLVYL 90
G + M+ P+ R H A + DGR M++WGG +S+ + Y P +L
Sbjct: 15 GPAFESYESMELACPAERSGHVA-VSDGRHMFVWGGY--KSNQVRGLYDFYLPREELWIY 71
Query: 91 DLKYFTWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYN--GLVEEHYNDIYRYCTRRQE 148
+++ W + NT G VP A LY+FGG++ G + Y R R +
Sbjct: 72 NMETGRWKKINTEGDVPPSMSGSCAVCVDRVLYLFGGHHSRGNTNKFYMLDSRSTDRVLQ 131
Query: 149 WARVIPHGAPPTKRRRQSCIIKGDTLIMFGG 179
W R+ G PP+ + + + + LI FGG
Sbjct: 132 WERIDCQGIPPSSKDKLGVWVYKNKLIFFGG 162
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 80/221 (36%), Gaps = 53/221 (23%)
Query: 4 TVHLTGGPRRVNHAAVLNDNKIFTFGGYCSGED------YVKRRPM-------------- 43
++ L R H AV + +F +GGY S + Y+ R +
Sbjct: 23 SMELACPAERSGHVAVSDGRHMFVWGGYKSNQVRGLYDFYLPREELWIYNMETGRWKKIN 82
Query: 44 -DGEPPSYRDFHTANIIDGRMYIWGG---RGDESSLYHSGSEVYCPDLVYLDLKYFTWIR 99
+G+ P A +D +Y++GG RG+ + Y S + W R
Sbjct: 83 TEGDVPPSMSGSCAVCVDRVLYLFGGHHSRGNTNKFYMLDSRS--------TDRVLQWER 134
Query: 100 PNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEH--------------------YND- 138
+ G P + +VY + L FGGY L E+ +ND
Sbjct: 135 IDCQGIPPSSKDKLGVWVYKNKLIFFGGYGYLPEDKVLGTFEFDETSFWNSSHPRGWNDH 194
Query: 139 IYRYCTRRQEWARVIPHGAPPTKRRRQSCIIKGDTLIMFGG 179
++ T W++ I G P+ R +C G+ +FGG
Sbjct: 195 VHILDTETFTWSQPITTGKAPSPRAAHACATVGNRGFVFGG 235
>sp|Q7Z6M1|RABEK_HUMAN Rab9 effector protein with kelch motifs OS=Homo sapiens GN=RABEPK
PE=1 SV=1
Length = 372
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 62/136 (45%), Gaps = 13/136 (9%)
Query: 47 PPSYRDFHTANI-IDGRMYIWGG--RGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTT 103
PPS R FHT++ I ++Y++GG RG + V L D TW +P T
Sbjct: 135 PPSPRTFHTSSAAIGNQLYVFGGGERGAQP--------VQDTKLHVFDANTLTWSQPETL 186
Query: 104 GSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPHGAPPTKRR 163
G+ P R H G L+I GG G + Y+D++ +W ++ P GA P
Sbjct: 187 GNPPSPRHGHVMVAAGTKLFIHGGLAG--DRFYDDLHCIDISDMKWQKLNPTGAAPAGCA 244
Query: 164 RQSCIIKGDTLIMFGG 179
S + G + +FGG
Sbjct: 245 AHSAVAMGKHVYIFGG 260
Score = 56.6 bits (135), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 70/175 (40%), Gaps = 27/175 (15%)
Query: 11 PRRVNHAAVLNDNKIFTFGGYCSGEDYVKRRPMD---------------GEPPSYRDFHT 55
PR + ++ N+++ FGG G V+ + G PPS R H
Sbjct: 138 PRTFHTSSAAIGNQLYVFGGGERGAQPVQDTKLHVFDANTLTWSQPETLGNPPSPRHGHV 197
Query: 56 ANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSA 115
+++I GG +G Y DL +D+ W + N TG+ P G +HSA
Sbjct: 198 MVAAGTKLFIHGGL--------AGDRFY-DDLHCIDISDMKWQKLNPTGAAPAGCAAHSA 248
Query: 116 FVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARV-IPHGAPPTKRRRQSCII 169
G +YIFGG + +Y+Y T Q W + PP + CII
Sbjct: 249 VAMGKHVYIFGGMT--PAGALDTMYQYHTEEQHWTLLKFDTLLPPGRLDHSMCII 301
>sp|Q4G5Y1|KLDC2_MOUSE Kelch domain-containing protein 2 OS=Mus musculus GN=Klhdc2 PE=2
SV=3
Length = 406
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 81/200 (40%), Gaps = 33/200 (16%)
Query: 11 PRRVNHAAVLNDNKIFTFGGYCSGEDYVKRRPMD----------------GEPPSYRDFH 54
P AV D ++ FGG+ S + K +D G PPS +D
Sbjct: 89 PSMSGSCAVCVDRVLYLFGGHHSRGNTNKFYMLDSRSADRGLQWERIDCQGIPPSSKDKL 148
Query: 55 TANIIDGRMYIWGGRG-------------DESSLYHSGSEVYCPDLVY-LDLKYFTWIRP 100
+ ++ +GG G DE+S ++S D V+ LD + F W +P
Sbjct: 149 GVWVYKNKLIFFGGYGYLPEDKVLGTFEFDETSFWNSSHPRGWNDHVHILDTETFAWSQP 208
Query: 101 NTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPHGAPPT 160
TTG P R +H+ G+ ++FGG + ND++ EW +IP G P
Sbjct: 209 ITTGKAPSPRAAHACATVGNKGFVFGGR--YRDARMNDLHYLNLDTWEWNELIPQGVCPV 266
Query: 161 KRRRQSCI-IKGDTLIMFGG 179
R S + D L +FGG
Sbjct: 267 GRSWHSLTPVSSDHLFLFGG 286
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 8/151 (5%)
Query: 34 GEDYVKRRPMDGEPPSYRDFHTANIIDGR-MYIWGGRGDESSLYHSGSEVYCP--DLVYL 90
G + M+ P+ R H A + DGR M++WGG +S+ + Y P +L
Sbjct: 15 GPAFENYEAMELACPAERSGHVA-VSDGRHMFVWGGY--KSNQVRGLYDFYLPREELWIY 71
Query: 91 DLKYFTWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYN--GLVEEHYNDIYRYCTRRQE 148
+++ W + NT G VP A LY+FGG++ G + Y R R +
Sbjct: 72 NMETGRWKKINTEGDVPPSMSGSCAVCVDRVLYLFGGHHSRGNTNKFYMLDSRSADRGLQ 131
Query: 149 WARVIPHGAPPTKRRRQSCIIKGDTLIMFGG 179
W R+ G PP+ + + + + LI FGG
Sbjct: 132 WERIDCQGIPPSSKDKLGVWVYKNKLIFFGG 162
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 79/221 (35%), Gaps = 53/221 (23%)
Query: 4 TVHLTGGPRRVNHAAVLNDNKIFTFGGYCSGED------YVKRRPM-------------- 43
+ L R H AV + +F +GGY S + Y+ R +
Sbjct: 23 AMELACPAERSGHVAVSDGRHMFVWGGYKSNQVRGLYDFYLPREELWIYNMETGRWKKIN 82
Query: 44 -DGEPPSYRDFHTANIIDGRMYIWGG---RGDESSLYHSGSEVYCPDLVYLDLKYFTWIR 99
+G+ P A +D +Y++GG RG+ + Y S L W R
Sbjct: 83 TEGDVPPSMSGSCAVCVDRVLYLFGGHHSRGNTNKFYMLDSRSADRGL--------QWER 134
Query: 100 PNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEH--------------------YND- 138
+ G P + +VY + L FGGY L E+ +ND
Sbjct: 135 IDCQGIPPSSKDKLGVWVYKNKLIFFGGYGYLPEDKVLGTFEFDETSFWNSSHPRGWNDH 194
Query: 139 IYRYCTRRQEWARVIPHGAPPTKRRRQSCIIKGDTLIMFGG 179
++ T W++ I G P+ R +C G+ +FGG
Sbjct: 195 VHILDTETFAWSQPITTGKAPSPRAAHACATVGNKGFVFGG 235
>sp|Q8N7A1|KLDC1_HUMAN Kelch domain-containing protein 1 OS=Homo sapiens GN=KLHDC1 PE=2
SV=2
Length = 406
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 84/209 (40%), Gaps = 43/209 (20%)
Query: 10 GPRRVNHAAVLNDNKIFTFGGYCSGEDYVKRRP------------------MDGEPPSYR 51
R H AV++ N ++ +GGY S ED P M+GE P+
Sbjct: 10 AEERSGHCAVVDGNFLYVWGGYVSIEDNEVYLPNDEIWTYDIDSGLWRMHLMEGELPASM 69
Query: 52 DFHTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRR 111
I+G++YI+GG D+ + +Y +L D Y + G P R
Sbjct: 70 SGSCGACINGKLYIFGGYDDKG----YSNRLYFVNLRTRDETYIWEKITDFEGQPPTPRD 125
Query: 112 SHSAFVYGDGLYIFGGY---------------NGLVEEH-----YNDIYRYCTRRQEWAR 151
S +VY D L FGGY + EE +ND++ + T+ Q W +
Sbjct: 126 KLSCWVYKDRLIYFGGYGCRRHSELQDCFDVHDASWEEQIFWGWHNDVHIFDTKTQTWFQ 185
Query: 152 -VIPHGAPPTKRRRQSCIIKGDTLIMFGG 179
I G PP R +C + G+ +FGG
Sbjct: 186 PEIKGGVPPQPRAAHTCAVLGNKGYIFGG 214
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 24/144 (16%)
Query: 45 GEPPSYRDFHTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWI-RPNTT 103
G PP R HT ++ + YI+GGR ++ + DL YL+L +TW R
Sbjct: 191 GVPPQPRAAHTCAVLGNKGYIFGGRVLQTRM---------NDLHYLNLDTWTWSGRITIN 241
Query: 104 GSVPVGRRSHSAF-VYGDGLYIFGGYNG----LVEEHYNDIYRYCTRRQEWARVIPHGAP 158
G P R H+ + D L++ GG + L + +++ C ++ + H P
Sbjct: 242 GESPKHRSWHTLTPIADDKLFLCGGLSADNIPLSDGWIHNVTTNCWKQ------LTH-LP 294
Query: 159 PTKRR--RQSCIIKGDTLIMFGGS 180
T+ R +C+ K + +++FGGS
Sbjct: 295 KTRPRLWHTACLGKENEIMVFGGS 318
>sp|Q3KRE6|KLDC2_RAT Kelch domain-containing protein 2 OS=Rattus norvegicus GN=Klhdc2
PE=2 SV=1
Length = 406
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 81/200 (40%), Gaps = 33/200 (16%)
Query: 11 PRRVNHAAVLNDNKIFTFGGYCSGEDYVKRRPMD----------------GEPPSYRDFH 54
P AV D ++ FGG+ S + K +D G PPS +D
Sbjct: 89 PSMSGSCAVCVDRVLYLFGGHHSRGNTNKFYMLDSRSADRVLQWERIDCQGIPPSSKDKL 148
Query: 55 TANIIDGRMYIWGGRG-------------DESSLYHSGSEVYCPDLVY-LDLKYFTWIRP 100
+ ++ +GG G DE+S ++S D V+ LD + F W +P
Sbjct: 149 GVWVYKNKLIFFGGYGYLPEDKVLGTFEFDETSFWNSSHPRGWNDHVHILDTETFAWSQP 208
Query: 101 NTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPHGAPPT 160
TTG P R +H+ G+ ++FGG + ND++ EW +IP G P
Sbjct: 209 ITTGKAPSPRAAHACATVGNKGFVFGGR--YRDARMNDLHYLNLDTWEWNELIPQGICPV 266
Query: 161 KRRRQSCI-IKGDTLIMFGG 179
R S + D L +FGG
Sbjct: 267 GRSWHSLTPVSSDHLFLFGG 286
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 66/142 (46%), Gaps = 8/142 (5%)
Query: 43 MDGEPPSYRDFHTANIIDGR-MYIWGGRGDESSLYHSGSEVYCP--DLVYLDLKYFTWIR 99
M+ P+ R H A + DGR M++WGG +S+ + Y P +L +++ W +
Sbjct: 24 MELACPAERSGHVA-VSDGRHMFVWGGY--KSNQVRGLYDFYLPREELWIYNMETGRWKK 80
Query: 100 PNTTGSVPVGRRSHSAFVYGDGLYIFGGYN--GLVEEHYNDIYRYCTRRQEWARVIPHGA 157
NT G VP A LY+FGG++ G + Y R R +W R+ G
Sbjct: 81 INTEGDVPPSMSGSCAVCVDRVLYLFGGHHSRGNTNKFYMLDSRSADRVLQWERIDCQGI 140
Query: 158 PPTKRRRQSCIIKGDTLIMFGG 179
PP+ + + + + LI FGG
Sbjct: 141 PPSSKDKLGVWVYKNKLIFFGG 162
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 80/221 (36%), Gaps = 53/221 (23%)
Query: 4 TVHLTGGPRRVNHAAVLNDNKIFTFGGYCSGED------YVKRRPM-------------- 43
+ L R H AV + +F +GGY S + Y+ R +
Sbjct: 23 AMELACPAERSGHVAVSDGRHMFVWGGYKSNQVRGLYDFYLPREELWIYNMETGRWKKIN 82
Query: 44 -DGEPPSYRDFHTANIIDGRMYIWGG---RGDESSLYHSGSEVYCPDLVYLDLKYFTWIR 99
+G+ P A +D +Y++GG RG+ + Y S D V W R
Sbjct: 83 TEGDVPPSMSGSCAVCVDRVLYLFGGHHSRGNTNKFYMLDSR--SADRV------LQWER 134
Query: 100 PNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEH--------------------YND- 138
+ G P + +VY + L FGGY L E+ +ND
Sbjct: 135 IDCQGIPPSSKDKLGVWVYKNKLIFFGGYGYLPEDKVLGTFEFDETSFWNSSHPRGWNDH 194
Query: 139 IYRYCTRRQEWARVIPHGAPPTKRRRQSCIIKGDTLIMFGG 179
++ T W++ I G P+ R +C G+ +FGG
Sbjct: 195 VHILDTETFAWSQPITTGKAPSPRAAHACATVGNKGFVFGG 235
>sp|Q5E9A7|KLDC2_BOVIN Kelch domain-containing protein 2 OS=Bos taurus GN=KLHDC2 PE=2 SV=1
Length = 406
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 81/200 (40%), Gaps = 33/200 (16%)
Query: 11 PRRVNHAAVLNDNKIFTFGGYCSGEDYVKRRPMD----------------GEPPSYRDFH 54
P AV D ++ FGG+ S + K +D G PPS +D
Sbjct: 89 PSMSGSCAVCVDRVLYLFGGHHSRGNTNKFYMLDSRSTDRVLHWERIDCQGVPPSSKDKL 148
Query: 55 TANIIDGRMYIWGGRG-------------DESSLYHSGSEVYCPDLVY-LDLKYFTWIRP 100
+ ++ +GG G DE+S ++S D V+ LD + F W +P
Sbjct: 149 GVWVYKNKLIFFGGYGYLPEDKVLGTFEFDETSFWNSSHPRGWNDHVHILDTETFIWSQP 208
Query: 101 NTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPHGAPPT 160
TTG P R +H+ G+ ++FGG + ND++ EW +IP G P
Sbjct: 209 ITTGKPPSPRAAHACATVGNKGFVFGGR--YRDARMNDLHYLNLDTWEWNELIPQGICPV 266
Query: 161 KRRRQSCI-IKGDTLIMFGG 179
R S + D L +FGG
Sbjct: 267 GRSWHSLTPVSSDHLFLFGG 286
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 63/137 (45%), Gaps = 8/137 (5%)
Query: 48 PSYRDFHTANIIDGR-MYIWGGRGDESSLYHSGSEVYCP--DLVYLDLKYFTWIRPNTTG 104
P+ R H A + DGR M++WGG +S+ + Y P +L +++ W + NT G
Sbjct: 29 PAERSGHVA-VSDGRHMFVWGGY--KSNQVRGLYDFYLPREELWIYNMETGRWKKINTEG 85
Query: 105 SVPVGRRSHSAFVYGDGLYIFGGYN--GLVEEHYNDIYRYCTRRQEWARVIPHGAPPTKR 162
VP A LY+FGG++ G + Y R R W R+ G PP+ +
Sbjct: 86 DVPPSMSGSCAVCVDRVLYLFGGHHSRGNTNKFYMLDSRSTDRVLHWERIDCQGVPPSSK 145
Query: 163 RRQSCIIKGDTLIMFGG 179
+ + + LI FGG
Sbjct: 146 DKLGVWVYKNKLIFFGG 162
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 80/221 (36%), Gaps = 53/221 (23%)
Query: 4 TVHLTGGPRRVNHAAVLNDNKIFTFGGYCSGED------YVKRRPM-------------- 43
+ L R H AV + +F +GGY S + Y+ R +
Sbjct: 23 SAELACPAERSGHVAVSDGRHMFVWGGYKSNQVRGLYDFYLPREELWIYNMETGRWKKIN 82
Query: 44 -DGEPPSYRDFHTANIIDGRMYIWGG---RGDESSLYHSGSEVYCPDLVYLDLKYFTWIR 99
+G+ P A +D +Y++GG RG+ + Y S + W R
Sbjct: 83 TEGDVPPSMSGSCAVCVDRVLYLFGGHHSRGNTNKFYMLDSRS--------TDRVLHWER 134
Query: 100 PNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEH--------------------YND- 138
+ G P + +VY + L FGGY L E+ +ND
Sbjct: 135 IDCQGVPPSSKDKLGVWVYKNKLIFFGGYGYLPEDKVLGTFEFDETSFWNSSHPRGWNDH 194
Query: 139 IYRYCTRRQEWARVIPHGAPPTKRRRQSCIIKGDTLIMFGG 179
++ T W++ I G PP+ R +C G+ +FGG
Sbjct: 195 VHILDTETFIWSQPITTGKPPSPRAAHACATVGNKGFVFGG 235
>sp|Q8RWD9|ACBP5_ARATH Acyl-CoA-binding domain-containing protein 5 OS=Arabidopsis
thaliana GN=ACBP5 PE=1 SV=1
Length = 648
Score = 60.5 bits (145), Expect = 6e-09, Method: Composition-based stats.
Identities = 50/192 (26%), Positives = 83/192 (43%), Gaps = 32/192 (16%)
Query: 8 TGGPRRVNHAA----VLNDNKIFTFGGYCSGEDYVKRRPMD---------------GEPP 48
T P ++ H A + DN++ + GG+ +D + P+ G+PP
Sbjct: 236 TSSPAKLTHCAGHSLIPWDNQLLSIGGHT--KDPSESMPVMVFDLHCCSWSILKTYGKPP 293
Query: 49 SYRDFHTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPV 108
R + ++ + I+GG+ + SL + DL LDL TW + GS P
Sbjct: 294 ISRGGQSVTLVGKSLVIFGGQDAKRSLLN--------DLHILDLDTMTWEEIDAVGSPPT 345
Query: 109 GRRSHSAFVYGDG-LYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPHGAPPTKRRRQSC 167
R H+A V+ + L IFGG G ++D++ + EW+R G PT R +
Sbjct: 346 PRSDHAAAVHAERYLLIFGG--GSHATCFDDLHVLDLQTMEWSRHTQQGDAPTPRAGHAG 403
Query: 168 IIKGDTLIMFGG 179
+ G+ + GG
Sbjct: 404 VTIGENWYIVGG 415
Score = 58.2 bits (139), Expect = 3e-08, Method: Composition-based stats.
Identities = 45/145 (31%), Positives = 65/145 (44%), Gaps = 20/145 (13%)
Query: 45 GEPPSYRDFHTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNT-- 102
G+PP R H A +I +MY++GG H+G Y DL LDLK +TW R T
Sbjct: 179 GQPPKARYQHGAAVIQDKMYMYGGN-------HNGR--YLGDLHVLDLKNWTWSRVETKV 229
Query: 103 -TGSVPVGRRS-------HSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIP 154
TGS + HS + + L GG+ E + + W+ +
Sbjct: 230 VTGSQETSSPAKLTHCAGHSLIPWDNQLLSIGGHTKDPSESM-PVMVFDLHCCSWSILKT 288
Query: 155 HGAPPTKRRRQSCIIKGDTLIMFGG 179
+G PP R QS + G +L++FGG
Sbjct: 289 YGKPPISRGGQSVTLVGKSLVIFGG 313
Score = 40.0 bits (92), Expect = 0.008, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 85 PDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGG-YNGLVEEHYNDIYRYC 143
PD V + Y W P T+G P R H A V D +Y++GG +NG + D++
Sbjct: 163 PDTVSV---YNQWTAPRTSGQPPKARYQHGAAVIQDKMYMYGGNHNG---RYLGDLHVLD 216
Query: 144 TRRQEWARV 152
+ W+RV
Sbjct: 217 LKNWTWSRV 225
>sp|Q61191|HCFC1_MOUSE Host cell factor 1 OS=Mus musculus GN=Hcfc1 PE=1 SV=2
Length = 2045
Score = 60.1 bits (144), Expect = 8e-09, Method: Composition-based stats.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 13/150 (8%)
Query: 40 RRPMDGEPPSYRDFHTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLK----YF 95
+ P +G PP R H+ +++ + Y++GG ++S + Y DL L+L+
Sbjct: 126 KTPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYILELRPGSGVV 185
Query: 96 TWIRPNTTGSVPVGRRSHSAFVYGD------GLYIFGGYNGLVEEHYNDIYRYCTRRQEW 149
W P T G +P R SH+A VY + L I+GG +G D++ W
Sbjct: 186 AWDIPITYGVLPPPRESHTAVVYTEKDNKKSKLVIYGGMSGC---RLGDLWTLDIETLTW 242
Query: 150 ARVIPHGAPPTKRRRQSCIIKGDTLIMFGG 179
+ G P R S G+ + +FGG
Sbjct: 243 NKPSLSGVAPLPRSLHSATTIGNKMYVFGG 272
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 47/168 (27%), Positives = 71/168 (42%), Gaps = 45/168 (26%)
Query: 13 RVNHAAVLNDNKIFTFGGYCSGEDYVKR--------------RPMDGE-----PPSY--- 50
R+ H+ L NK + FGG + + K RP G P +Y
Sbjct: 137 RLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYILELRPGSGVVAWDIPITYGVL 196
Query: 51 ---RDFHTANII------DGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPN 101
R+ HTA + ++ I+GG SG + DL LD++ TW +P+
Sbjct: 197 PPPRESHTAVVYTEKDNKKSKLVIYGGM--------SGCRL--GDLWTLDIETLTWNKPS 246
Query: 102 TTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEW 149
+G P+ R HSA G+ +Y+FGG+ LV D + T +EW
Sbjct: 247 LSGVAPLPRSLHSATTIGNKMYVFGGWVPLVM----DDVKVATHEKEW 290
Score = 47.0 bits (110), Expect = 6e-05, Method: Composition-based stats.
Identities = 39/141 (27%), Positives = 58/141 (41%), Gaps = 19/141 (13%)
Query: 45 GEPPSYRDFHTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTG 104
G P R H A I + ++GG G+E +L + W P G
Sbjct: 27 GPVPRPRHGHRAVAIKELIVVFGG----------GNEGIVDELHVYNTATNQWFIPAVRG 76
Query: 105 SVPVGRRSHSAFVYGDGLYIFGGYNGLVE--EHYNDIYRYCTRRQEW----ARVIPHGAP 158
+P G ++ G L +FG G+VE ++ ND+Y R EW A+ +G P
Sbjct: 77 DIPPGCAAYGFVCDGTRLLVFG---GMVEYGKYSNDLYELQASRWEWKRLKAKTPKNGPP 133
Query: 159 PTKRRRQSCIIKGDTLIMFGG 179
P R S + G+ +FGG
Sbjct: 134 PCPRLGHSFSLVGNKCYLFGG 154
Score = 40.8 bits (94), Expect = 0.005, Method: Composition-based stats.
Identities = 43/157 (27%), Positives = 64/157 (40%), Gaps = 30/157 (19%)
Query: 3 WTVHLTGG---PRRVNHAAVL---NDNK---IFTFGGYCSG-----------EDYVKRRP 42
W + +T G P R +H AV+ DNK + +GG SG E +P
Sbjct: 187 WDIPITYGVLPPPRESHTAVVYTEKDNKKSKLVIYGGM-SGCRLGDLWTLDIETLTWNKP 245
Query: 43 -MDGEPPSYRDFHTANIIDGRMYIWGG----RGDESSLYHSGSEVYCPD-LVYLDLKYFT 96
+ G P R H+A I +MY++GG D+ + E C + L L+L
Sbjct: 246 SLSGVAPLPRSLHSATTIGNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACLNLDTMA 305
Query: 97 W---IRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNG 130
W + ++P R H A LYI+ G +G
Sbjct: 306 WETILMDTLEDNIPRARAGHCAVAINTRLYIWSGRDG 342
Score = 33.5 bits (75), Expect = 0.78, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 48 PSYRDFHTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLD 91
P R H A I+ R+YIW GR ++ ++V C DL YL+
Sbjct: 319 PRARAGHCAVAINTRLYIWSGRDGYRKAWN--NQVCCKDLWYLE 360
Score = 33.1 bits (74), Expect = 1.0, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Query: 103 TGSVPVGRRSHSAFVYGDGLYIFGGYN-GLVEEHYNDIYRYCTRRQEWARVIPHGAPPTK 161
+G VP R H A + + +FGG N G+V+E ++ Y T +W G P
Sbjct: 26 SGPVPRPRHGHRAVAIKELIVVFGGGNEGIVDE----LHVYNTATNQWFIPAVRGDIPPG 81
Query: 162 RRRQSCIIKGDTLIMFGG 179
+ G L++FGG
Sbjct: 82 CAAYGFVCDGTRLLVFGG 99
>sp|P51611|HCFC1_MESAU Host cell factor 1 OS=Mesocricetus auratus GN=HCFC1 PE=1 SV=1
Length = 2090
Score = 60.1 bits (144), Expect = 8e-09, Method: Composition-based stats.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 13/150 (8%)
Query: 40 RRPMDGEPPSYRDFHTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLK----YF 95
+ P +G PP R H+ +++ + Y++GG ++S + Y DL L+L+
Sbjct: 126 KTPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYILELRPGSGVV 185
Query: 96 TWIRPNTTGSVPVGRRSHSAFVYGD------GLYIFGGYNGLVEEHYNDIYRYCTRRQEW 149
W P T G +P R SH+A VY + L I+GG +G D++ W
Sbjct: 186 AWDIPITYGVLPPPRESHTAVVYTEKDNKKSKLVIYGGMSGC---RLGDLWTLDIETLTW 242
Query: 150 ARVIPHGAPPTKRRRQSCIIKGDTLIMFGG 179
+ G P R S G+ + +FGG
Sbjct: 243 NKPSLSGVAPLPRSLHSATTIGNKMYVFGG 272
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 47/168 (27%), Positives = 71/168 (42%), Gaps = 45/168 (26%)
Query: 13 RVNHAAVLNDNKIFTFGGYCSGEDYVKR--------------RPMDGE-----PPSY--- 50
R+ H+ L NK + FGG + + K RP G P +Y
Sbjct: 137 RLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYILELRPGSGVVAWDIPITYGVL 196
Query: 51 ---RDFHTANII------DGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPN 101
R+ HTA + ++ I+GG SG + DL LD++ TW +P+
Sbjct: 197 PPPRESHTAVVYTEKDNKKSKLVIYGGM--------SGCRL--GDLWTLDIETLTWNKPS 246
Query: 102 TTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEW 149
+G P+ R HSA G+ +Y+FGG+ LV D + T +EW
Sbjct: 247 LSGVAPLPRSLHSATTIGNKMYVFGGWVPLVM----DDVKVATHEKEW 290
Score = 47.0 bits (110), Expect = 6e-05, Method: Composition-based stats.
Identities = 39/141 (27%), Positives = 58/141 (41%), Gaps = 19/141 (13%)
Query: 45 GEPPSYRDFHTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTG 104
G P R H A I + ++GG G+E +L + W P G
Sbjct: 27 GPVPRPRHGHRAVAIKELIVVFGG----------GNEGIVDELHVYNTATNQWFIPAVRG 76
Query: 105 SVPVGRRSHSAFVYGDGLYIFGGYNGLVE--EHYNDIYRYCTRRQEW----ARVIPHGAP 158
+P G ++ G L +FG G+VE ++ ND+Y R EW A+ +G P
Sbjct: 77 DIPPGCAAYGFVCDGTRLLVFG---GMVEYGKYSNDLYELQASRWEWKRLKAKTPKNGPP 133
Query: 159 PTKRRRQSCIIKGDTLIMFGG 179
P R S + G+ +FGG
Sbjct: 134 PCPRLGHSFSLVGNKCYLFGG 154
Score = 40.8 bits (94), Expect = 0.005, Method: Composition-based stats.
Identities = 43/157 (27%), Positives = 64/157 (40%), Gaps = 30/157 (19%)
Query: 3 WTVHLTGG---PRRVNHAAVL---NDNK---IFTFGGYCSG-----------EDYVKRRP 42
W + +T G P R +H AV+ DNK + +GG SG E +P
Sbjct: 187 WDIPITYGVLPPPRESHTAVVYTEKDNKKSKLVIYGGM-SGCRLGDLWTLDIETLTWNKP 245
Query: 43 -MDGEPPSYRDFHTANIIDGRMYIWGG----RGDESSLYHSGSEVYCPD-LVYLDLKYFT 96
+ G P R H+A I +MY++GG D+ + E C + L L+L
Sbjct: 246 SLSGVAPLPRSLHSATTIGNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACLNLDTMA 305
Query: 97 W---IRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNG 130
W + ++P R H A LYI+ G +G
Sbjct: 306 WETILMDTLEDNIPRARAGHCAVAINTRLYIWSGRDG 342
Score = 33.5 bits (75), Expect = 0.78, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 48 PSYRDFHTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLD 91
P R H A I+ R+YIW GR ++ ++V C DL YL+
Sbjct: 319 PRARAGHCAVAINTRLYIWSGRDGYRKAWN--NQVCCKDLWYLE 360
Score = 33.1 bits (74), Expect = 1.0, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Query: 103 TGSVPVGRRSHSAFVYGDGLYIFGGYN-GLVEEHYNDIYRYCTRRQEWARVIPHGAPPTK 161
+G VP R H A + + +FGG N G+V+E ++ Y T +W G P
Sbjct: 26 SGPVPRPRHGHRAVAIKELIVVFGGGNEGIVDE----LHVYNTATNQWFIPAVRGDIPPG 81
Query: 162 RRRQSCIIKGDTLIMFGG 179
+ G L++FGG
Sbjct: 82 CAAYGFVCDGTRLLVFGG 99
>sp|Q54C94|GEFF_DICDI Ras guanine nucleotide exchange factor F OS=Dictyostelium
discoideum GN=gefF PE=2 SV=1
Length = 1127
Score = 59.7 bits (143), Expect = 1e-08, Method: Composition-based stats.
Identities = 50/193 (25%), Positives = 84/193 (43%), Gaps = 20/193 (10%)
Query: 3 WTVHLTGGPR---RVNHAAVLNDNKIFTFGGYC----SGEDYV--------KRRPMDGEP 47
WT+ LT G R H VL +N ++ FGGY + YV +G
Sbjct: 239 WTI-LTFGSAPSIRTRHTGVLYNNSMYIFGGYSPSGPKNDIYVFSFDTQTWSEVQTEGTK 297
Query: 48 PSYRDFHTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVP 107
PS R HTA + G M ++GG + + + + D+ L+L W + +T P
Sbjct: 298 PSPRYGHTAVVESGHMIVFGGISCDQT---TKQQTVNNDIFSLNLDTKQWSQVLST-CPP 353
Query: 108 VGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPHGAPPTKRRRQSC 167
R H+A ++ +Y+FGG + + + ++ Y W + G+ T R S
Sbjct: 354 SPRTHHTATMHKGNMYVFGGQDQQSNQVEDIVHCYTWASNSWKSIQFEGSSMTPRSDHSA 413
Query: 168 IIKGDTLIMFGGS 180
++ D++ + GGS
Sbjct: 414 VLFQDSIFISGGS 426
Score = 54.7 bits (130), Expect = 4e-07, Method: Composition-based stats.
Identities = 47/198 (23%), Positives = 81/198 (40%), Gaps = 30/198 (15%)
Query: 3 WTVHLTGGPR---RVNHAAVLNDNKIFTFGGYCSGEDYVKRRPMDGE------------- 46
W+ T G + R H AV+ + FGG S + K++ ++ +
Sbjct: 288 WSEVQTEGTKPSPRYGHTAVVESGHMIVFGG-ISCDQTTKQQTVNNDIFSLNLDTKQWSQ 346
Query: 47 -----PPSYRDFHTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPN 101
PPS R HTA + G MY++GG+ +S+ Y +W
Sbjct: 347 VLSTCPPSPRTHHTATMHKGNMYVFGGQDQQSNQVEDIVHCYT-------WASNSWKSIQ 399
Query: 102 TTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPHGAPPTK 161
GS R HSA ++ D ++I GG + +IY Y +++ + I
Sbjct: 400 FEGSSMTPRSDHSAVLFQDSIFISGGSSKSQTSQNLEIYEYDLYQKKCFK-ISSSTIVQN 458
Query: 162 RRRQSCIIKGDTLIMFGG 179
R S ++KG++++ +GG
Sbjct: 459 RISHSSVVKGNSILFWGG 476
Score = 39.7 bits (91), Expect = 0.012, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 98 IRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHY-NDIYRYCTRRQEWARVIPHG 156
+R N+ +P +H+ V DG Y+FGG L + Y ND Y + + W ++ G
Sbjct: 191 LRNNSADILP--HNNHTYCVGDDGFYLFGG--TLPDGSYTNDFYTFQFAIKAWT-ILTFG 245
Query: 157 APPTKRRRQSCIIKGDTLIMFGG 179
+ P+ R R + ++ +++ +FGG
Sbjct: 246 SAPSIRTRHTGVLYNNSMYIFGG 268
>sp|Q9MA55|ACBP4_ARATH Acyl-CoA-binding domain-containing protein 4 OS=Arabidopsis
thaliana GN=ACBP4 PE=1 SV=1
Length = 668
Score = 59.7 bits (143), Expect = 1e-08, Method: Composition-based stats.
Identities = 46/178 (25%), Positives = 78/178 (43%), Gaps = 24/178 (13%)
Query: 16 HAAVLNDNKIFTFGGYCSG-EDYVKRRPMD------------GEPPSYRDFHTANIIDGR 62
H+ + DNK+ + GG+ + ++ + D G+PP R + ++
Sbjct: 247 HSLIAWDNKLLSIGGHTKDPSESMQVKVFDPHTITWSMLKTYGKPPVSRGGQSVTMVGKT 306
Query: 63 MYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYGDG- 121
+ I+GG+ + SL + DL LDL TW + G P R H+A V+ +
Sbjct: 307 LVIFGGQDAKRSLLN--------DLHILDLDTMTWDEIDAVGVSPSPRSDHAAAVHAERF 358
Query: 122 LYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPHGAPPTKRRRQSCIIKGDTLIMFGG 179
L IFGG G ++D++ + EW+R G PT R + + G+ + GG
Sbjct: 359 LLIFGG--GSHATCFDDLHVLDLQTMEWSRPAQQGDAPTPRAGHAGVTIGENWFIVGG 414
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/145 (30%), Positives = 62/145 (42%), Gaps = 20/145 (13%)
Query: 45 GEPPSYRDFHTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTG 104
G+ P R H A +I +MYI+GG H+G Y DL LDLK +TW R T
Sbjct: 178 GQRPKARYEHGAAVIQDKMYIYGGN-------HNGR--YLGDLHVLDLKSWTWSRVETKV 228
Query: 105 SVPVGRRS----------HSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIP 154
+ S HS + + L GG+ E + + W+ +
Sbjct: 229 ATESQETSTPTLLAPCAGHSLIAWDNKLLSIGGHTKDPSESMQ-VKVFDPHTITWSMLKT 287
Query: 155 HGAPPTKRRRQSCIIKGDTLIMFGG 179
+G PP R QS + G TL++FGG
Sbjct: 288 YGKPPVSRGGQSVTMVGKTLVIFGG 312
Score = 40.4 bits (93), Expect = 0.006, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 94 YFTWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGG-YNGLVEEHYNDIYRYCTRRQEWARV 152
Y W P T+G P R H A V D +YI+GG +NG + D++ + W+RV
Sbjct: 168 YNQWTAPQTSGQRPKARYEHGAAVIQDKMYIYGGNHNG---RYLGDLHVLDLKSWTWSRV 224
Score = 35.4 bits (80), Expect = 0.21, Method: Composition-based stats.
Identities = 41/158 (25%), Positives = 58/158 (36%), Gaps = 30/158 (18%)
Query: 1 MHW----TVHLTGGPRRVNHAAVLNDNKIFTFGG----YCSGEDYV--------KRRPMD 44
M W V ++ PR + AAV + + FGG C + +V R
Sbjct: 331 MTWDEIDAVGVSPSPRSDHAAAVHAERFLLIFGGGSHATCFDDLHVLDLQTMEWSRPAQQ 390
Query: 45 GEPPSYRDFHTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTW-IRPNTT 103
G+ P+ R H I +I GG ++S S V L++ W + +
Sbjct: 391 GDAPTPRAGHAGVTIGENWFIVGGGDNKSGASES---------VVLNMSTLAWSVVASVQ 441
Query: 104 GSVPVGRRSHSAFVYG----DGLYIFGGYNGLVEEHYN 137
G VP+ S V D L FGGYNG N
Sbjct: 442 GRVPLASEGLSLVVSSYNGEDVLVAFGGYNGRYNNEIN 479
>sp|P51610|HCFC1_HUMAN Host cell factor 1 OS=Homo sapiens GN=HCFC1 PE=1 SV=2
Length = 2035
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 13/150 (8%)
Query: 40 RRPMDGEPPSYRDFHTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLK----YF 95
+ P +G PP R H+ +++ + Y++GG ++S + Y DL L+L+
Sbjct: 126 KTPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYILELRPGSGVV 185
Query: 96 TWIRPNTTGSVPVGRRSHSAFVYGD------GLYIFGGYNGLVEEHYNDIYRYCTRRQEW 149
W P T G +P R SH+A VY + L I+GG +G D++ W
Sbjct: 186 AWDIPITYGVLPPPRESHTAVVYTEKDNKKSKLVIYGGMSGC---RLGDLWTLDIDTLTW 242
Query: 150 ARVIPHGAPPTKRRRQSCIIKGDTLIMFGG 179
+ G P R S G+ + +FGG
Sbjct: 243 NKPSLSGVAPLPRSLHSATTIGNKMYVFGG 272
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 47/168 (27%), Positives = 70/168 (41%), Gaps = 45/168 (26%)
Query: 13 RVNHAAVLNDNKIFTFGGYCSGEDYVKR--------------RPMDGE-----PPSY--- 50
R+ H+ L NK + FGG + + K RP G P +Y
Sbjct: 137 RLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYILELRPGSGVVAWDIPITYGVL 196
Query: 51 ---RDFHTANII------DGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPN 101
R+ HTA + ++ I+GG SG + DL LD+ TW +P+
Sbjct: 197 PPPRESHTAVVYTEKDNKKSKLVIYGGM--------SGCRL--GDLWTLDIDTLTWNKPS 246
Query: 102 TTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEW 149
+G P+ R HSA G+ +Y+FGG+ LV D + T +EW
Sbjct: 247 LSGVAPLPRSLHSATTIGNKMYVFGGWVPLVM----DDVKVATHEKEW 290
Score = 47.0 bits (110), Expect = 6e-05, Method: Composition-based stats.
Identities = 39/141 (27%), Positives = 58/141 (41%), Gaps = 19/141 (13%)
Query: 45 GEPPSYRDFHTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTG 104
G P R H A I + ++GG G+E +L + W P G
Sbjct: 27 GPVPRPRHGHRAVAIKELIVVFGG----------GNEGIVDELHVYNTATNQWFIPAVRG 76
Query: 105 SVPVGRRSHSAFVYGDGLYIFGGYNGLVE--EHYNDIYRYCTRRQEW----ARVIPHGAP 158
+P G ++ G L +FG G+VE ++ ND+Y R EW A+ +G P
Sbjct: 77 DIPPGCAAYGFVCDGTRLLVFG---GMVEYGKYSNDLYELQASRWEWKRLKAKTPKNGPP 133
Query: 159 PTKRRRQSCIIKGDTLIMFGG 179
P R S + G+ +FGG
Sbjct: 134 PCPRLGHSFSLVGNKCYLFGG 154
Score = 39.3 bits (90), Expect = 0.013, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 63/156 (40%), Gaps = 28/156 (17%)
Query: 3 WTVHLTGG---PRRVNHAAVL---NDNK---IFTFGGYCS---GEDYV--------KRRP 42
W + +T G P R +H AV+ DNK + +GG G+ + +
Sbjct: 187 WDIPITYGVLPPPRESHTAVVYTEKDNKKSKLVIYGGMSGCRLGDLWTLDIDTLTWNKPS 246
Query: 43 MDGEPPSYRDFHTANIIDGRMYIWGG----RGDESSLYHSGSEVYCPD-LVYLDLKYFTW 97
+ G P R H+A I +MY++GG D+ + E C + L L+L W
Sbjct: 247 LSGVAPLPRSLHSATTIGNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACLNLDTMAW 306
Query: 98 ---IRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNG 130
+ ++P R H A LYI+ G +G
Sbjct: 307 ETILMDTLEDNIPRARAGHCAVAINTRLYIWSGRDG 342
Score = 33.5 bits (75), Expect = 0.78, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 48 PSYRDFHTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLD 91
P R H A I+ R+YIW GR ++ ++V C DL YL+
Sbjct: 319 PRARAGHCAVAINTRLYIWSGRDGYRKAWN--NQVCCKDLWYLE 360
Score = 33.1 bits (74), Expect = 1.0, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Query: 103 TGSVPVGRRSHSAFVYGDGLYIFGGYN-GLVEEHYNDIYRYCTRRQEWARVIPHGAPPTK 161
+G VP R H A + + +FGG N G+V+E ++ Y T +W G P
Sbjct: 26 SGPVPRPRHGHRAVAIKELIVVFGGGNEGIVDE----LHVYNTATNQWFIPAVRGDIPPG 81
Query: 162 RRRQSCIIKGDTLIMFGG 179
+ G L++FGG
Sbjct: 82 CAAYGFVCDGTRLLVFGG 99
>sp|A8JAM0|CC135_CHLRE Coiled-coil domain-containing protein lobo homolog (Fragment)
OS=Chlamydomonas reinhardtii GN=FAP50 PE=2 SV=1
Length = 1159
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 13/142 (9%)
Query: 41 RPMDGEPPSYRDFHTA--NIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWI 98
+P GE P R H A + + R+ ++GGR E + D+ +LDL +TW
Sbjct: 340 QPCKGEKPPPRYNHAACYDEENNRLVVFGGRTAERKRLN--------DIYFLDLDSWTWF 391
Query: 99 RPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPHGAP 158
+P+T G+ P R A + + +FGG+ + ND++ +W++ G
Sbjct: 392 KPSTEGTAPTPREQAVATFWAGSMVLFGGH--AIGGRTNDLFLLDLGAWQWSQPAFSGTA 449
Query: 159 PTKRRRQS-CIIKGDTLIMFGG 179
P+ R+ + CI G+ L + GG
Sbjct: 450 PSPRQACALCIGHGNLLFVHGG 471
Score = 33.1 bits (74), Expect = 1.1, Method: Composition-based stats.
Identities = 40/177 (22%), Positives = 60/177 (33%), Gaps = 56/177 (31%)
Query: 11 PRRVNHAAVLND--NKIFTFGG------------YCSGEDYVKRRP-MDGEPPSYRDFHT 55
P R NHAA ++ N++ FGG + + + +P +G P+ R+
Sbjct: 348 PPRYNHAACYDEENNRLVVFGGRTAERKRLNDIYFLDLDSWTWFKPSTEGTAPTPREQAV 407
Query: 56 ANIIDGRMYIWGGR---GDESSLY------------------------------------ 76
A G M ++GG G + L+
Sbjct: 408 ATFWAGSMVLFGGHAIGGRTNDLFLLDLGAWQWSQPAFSGTAPSPRQACALCIGHGNLLF 467
Query: 77 -HSGSEVYC-PDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGL 131
H G + DL +D W G VP R SH V+ D LY+ GG + L
Sbjct: 468 VHGGRNNFVLEDLHVMDFVSKNWTEIPCEGRVPPPRHSHRITVHRDQLYLLGGLDEL 524
>sp|P50090|KEL2_YEAST Kelch repeat-containing protein 2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=KEL2 PE=1 SV=1
Length = 882
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 51/199 (25%), Positives = 81/199 (40%), Gaps = 44/199 (22%)
Query: 11 PRRVNHAAVLNDNKIFTFGG------------------YCSGEDYVKRRPMDGEPPSYRD 52
P RV HA+ + N FGG + + +P+ G P R
Sbjct: 140 PPRVGHASTICGNAYVVFGGDTHKLNKNGLLDDDLYLFNINSYKWTIPQPI-GRRPLGRY 198
Query: 53 FHTANII-----DGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNT----- 102
H +II ++Y++GG+ DE+ Y DLV DL F RPN+
Sbjct: 199 GHKISIIASNPMQTKLYLFGGQVDET---------YFNDLVVFDLSSFR--RPNSHWEFL 247
Query: 103 --TGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPHGAPPT 160
G +P +H+ Y + L++FGG + ND YRY + EW++V G P
Sbjct: 248 EPVGDLPPPLTNHTMVAYDNKLWVFGGETP--KTISNDTYRYDPAQSEWSKVKTTGEKPP 305
Query: 161 KRRRQSCIIKGDTLIMFGG 179
+ + ++ + + GG
Sbjct: 306 PIQEHASVVYKHLMCVLGG 324
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 49/196 (25%), Positives = 76/196 (38%), Gaps = 35/196 (17%)
Query: 13 RVNHAA---VLNDNKIFTFGGY---------------CSGEDYVKRR-PMDGEPPSYRDF 53
R H++ V NDN+IF GG G + +R +D P R
Sbjct: 85 RYRHSSSFIVTNDNRIFVTGGLHDQSVYGDVWQIAANADGTSFTSKRIDIDQNTPPPRVG 144
Query: 54 HTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSH 113
H + I ++G GD L +G + DL ++ + W P G P+GR H
Sbjct: 145 HASTICGNAYVVFG--GDTHKLNKNG--LLDDDLYLFNINSYKWTIPQPIGRRPLGRYGH 200
Query: 114 SAFVYGDG-----LYIFGGYNGLVEEHYNDIYRY---CTRR--QEWARVIPHGAPPTKRR 163
+ LY+FGG + E ++ND+ + RR W + P G P
Sbjct: 201 KISIIASNPMQTKLYLFGGQ--VDETYFNDLVVFDLSSFRRPNSHWEFLEPVGDLPPPLT 258
Query: 164 RQSCIIKGDTLIMFGG 179
+ + + L +FGG
Sbjct: 259 NHTMVAYDNKLWVFGG 274
>sp|Q8VCH5|RABEK_MOUSE Rab9 effector protein with kelch motifs OS=Mus musculus GN=Rabepk
PE=2 SV=2
Length = 380
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 80/185 (43%), Gaps = 28/185 (15%)
Query: 13 RVNHAAVL---NDNKIFTFGG-----------YCSGEDYVKRRP-MDGEPPSYRDFHTAN 57
R HA+ L + + I+ FGG S ED P + G PPS R FHT++
Sbjct: 94 RYEHASFLPSCSPHSIWVFGGADQSGNRNCLQVMSPEDRTWSTPEVTGSPPSPRTFHTSS 153
Query: 58 I-IDGRMYIWGG--RGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHS 114
I ++Y++GG RG + V L D TW +P T GS P R H
Sbjct: 154 AAIGNQLYVFGGGERGAQP--------VEDVKLHVFDANTLTWSQPETHGSPPSPRHGHV 205
Query: 115 AFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPHGAPPTKRRRQSCIIKGDTL 174
G L+I GG G ++ ++D++ W ++ P GA P + + G +
Sbjct: 206 MVAAGTKLFIHGGLAG--DKFFDDLHCIDIGDMSWQKLGPTGAVPVGCAAHAAVAVGHHV 263
Query: 175 IMFGG 179
MFGG
Sbjct: 264 YMFGG 268
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 73/175 (41%), Gaps = 27/175 (15%)
Query: 11 PRRVNHAAVLNDNKIFTFGGYCSGEDYVK---------------RRPMDGEPPSYRDFHT 55
PR + ++ N+++ FGG G V+ + G PPS R H
Sbjct: 146 PRTFHTSSAAIGNQLYVFGGGERGAQPVEDVKLHVFDANTLTWSQPETHGSPPSPRHGHV 205
Query: 56 ANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSA 115
+++I GG + + DL +D+ +W + TG+VPVG +H+A
Sbjct: 206 MVAAGTKLFIHGGLAGDK---------FFDDLHCIDIGDMSWQKLGPTGAVPVGCAAHAA 256
Query: 116 FVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPHGAPPTKRRRQS-CII 169
G +Y+FGG N +Y+Y T +Q W + + P R S C+I
Sbjct: 257 VAVGHHVYMFGGMT--ATGALNMMYKYHTEKQHWTVLQFDTSLPAGRLDHSMCVI 309
>sp|Q6AXB2|RABEK_XENLA Rab9 effector protein with kelch motifs OS=Xenopus laevis GN=rabepk
PE=2 SV=1
Length = 366
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 61/137 (44%), Gaps = 11/137 (8%)
Query: 45 GEPPSYRDFHTANI-IDGRMYIWGGRGDESSLYHSGSEVYCPDLVYL-DLKYFTWIRPNT 102
G PPS R FHT++ I+ ++Y++GG G+E +Y+ D TW +P T
Sbjct: 133 GTPPSPRTFHTSSAAIEDKLYVFGGG-------EKGAEPVADTNLYIYDAATMTWTQPVT 185
Query: 103 TGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPHGAPPTKR 162
+G P R H G L++ GG G + D++ T +W R+ G P
Sbjct: 186 SGDPPQARHGHVLTALGTKLFVHGGMAG--STFFKDMFCIDTDTMKWERLKTKGDLPPAC 243
Query: 163 RRQSCIIKGDTLIMFGG 179
S + + +FGG
Sbjct: 244 AAHSSVAWKSYIYIFGG 260
>sp|Q80YG3|KLDC1_MOUSE Kelch domain-containing protein 1 OS=Mus musculus GN=Klhdc1 PE=2
SV=1
Length = 406
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 86/214 (40%), Gaps = 53/214 (24%)
Query: 10 GPRRVNHAAVLNDNKIFTFGGYCSGED------------------YVKRRPMDGEPPSYR 51
R H AV++ + ++ +GGY S ED K M+GE P
Sbjct: 10 AEERSGHCAVVDGHFLYVWGGYVSIEDNEVYLPNDEMWTYDIDSGLWKMHLMEGELPPSM 69
Query: 52 DFHTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKY----FTWIRPNT-TGSV 106
I GR+Y++GG D+ Y L +++L+ +TW + G
Sbjct: 70 SGSCGACIHGRLYVFGGYDDKG---------YSNRLYFVNLRTRDGTYTWEKITKFDGQP 120
Query: 107 PVGRRSHSAFVYGDGLYIFGGY---------------NGLVEEH-----YNDIYRYCTRR 146
P R S +VY D L FGGY + EE +ND++ + T+
Sbjct: 121 PTPRDKLSCWVYKDRLIYFGGYGYRRHSELQECFDVHDASWEEQIFWGWHNDVHVFDTKT 180
Query: 147 QEWAR-VIPHGAPPTKRRRQSCIIKGDTLIMFGG 179
+ W++ I G PP R SC + G+ +FGG
Sbjct: 181 RTWSQPEIKGGVPPQPRAAHSCAVLGNKGYVFGG 214
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 68/142 (47%), Gaps = 20/142 (14%)
Query: 45 GEPPSYRDFHTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWI-RPNTT 103
G PP R H+ ++ + Y++GGR ++ + DL YL+L + W R +
Sbjct: 191 GVPPQPRAAHSCAVLGNKGYVFGGRVLQTRM---------NDLHYLNLDTWVWSGRISVN 241
Query: 104 GSVPVGRRSHS-AFVYGDGLYIFGGYNG----LVEEHYNDIYRYCTRRQEWARVIPHGAP 158
G P R H+ + D L++FGG N L + ++I C ++ R +P+ P
Sbjct: 242 GESPKHRSWHTLTAITDDKLFLFGGLNADNIPLSDGWIHNITTNCWKQ---LRHLPYTRP 298
Query: 159 PTKRRRQSCIIKGDTLIMFGGS 180
+ +C+ K + +++FGGS
Sbjct: 299 --RLWHTACLGKENEIMVFGGS 318
Score = 33.1 bits (74), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 65/153 (42%), Gaps = 27/153 (17%)
Query: 11 PRRVNHAAVLNDNKIFTFGG-----------YCSGEDYV--KRRPMDGEPPSYRDFHTAN 57
PR + AVL NK + FGG Y + + +V R ++GE P +R +HT
Sbjct: 196 PRAAHSCAVLG-NKGYVFGGRVLQTRMNDLHYLNLDTWVWSGRISVNGESPKHRSWHTLT 254
Query: 58 -IIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAF 116
I D +++++GG ++ G + L++ + RP + +G+ +
Sbjct: 255 AITDDKLFLFGGLNADNIPLSDGWIHNITTNCWKQLRHLPYTRPRLWHTACLGKENE--- 311
Query: 117 VYGDGLYIFGGYNG----LVEEHYNDIYRYCTR 145
+ +FGG L H ND+ + T+
Sbjct: 312 -----IMVFGGSKDNLLFLDTGHCNDLLIFQTQ 339
>sp|O14248|TEA3_SCHPO Tip elongation aberrant protein 3 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=tea3 PE=1 SV=1
Length = 1125
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 44/197 (22%), Positives = 73/197 (37%), Gaps = 58/197 (29%)
Query: 2 HWTVHLTGGP---RRVNHAAVLNDNKIFTFGGYCSGE----------------------- 35
W + T P R H+ +L D+K++ FGG C G+
Sbjct: 155 QWNLVSTQSPLPSPRTGHSMLLVDSKLWIFGGECQGKYLNDIHLFDTKGVDRRTQSELKQ 214
Query: 36 -----------------DYVKRRP-MDGEPPSYRDFHTANIIDGRMYIWGGRGDESSLYH 77
D+ P + P R H+ ++ G++++ GG D L
Sbjct: 215 KANANNVEKANMEFDETDWSWETPFLHSSSPPPRSNHSVTLVQGKIFVHGGHNDTGPL-- 272
Query: 78 SGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYN--GLVEEH 135
DL DL+ +W + G P R H A D +YI+GG + GL+
Sbjct: 273 -------SDLWLFDLETLSWTEVRSIGRFPGPREGHQATTIDDTVYIYGGRDNKGLI--- 322
Query: 136 YNDIYRYCTRRQEWARV 152
N+++ + +Q W+ V
Sbjct: 323 LNELWAFNYSQQRWSLV 339
Score = 40.4 bits (93), Expect = 0.006, Method: Composition-based stats.
Identities = 45/212 (21%), Positives = 79/212 (37%), Gaps = 50/212 (23%)
Query: 11 PRRVNHAAVLNDNKIFTFGGYCSGEDYV----------------------KRRPMDGEPP 48
P RV H+ V + + I+ FGG S D + P+ P
Sbjct: 111 PARVGHSIVCSADTIYLFGGCDSETDSTFEVGDNSLYAYNFKSNQWNLVSTQSPL----P 166
Query: 49 SYRDFHTANIIDGRMYIWGG-------------------RGDESSLYH--SGSEVYCPDL 87
S R H+ ++D +++I+GG R +S L + + V ++
Sbjct: 167 SPRTGHSMLLVDSKLWIFGGECQGKYLNDIHLFDTKGVDRRTQSELKQKANANNVEKANM 226
Query: 88 VYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQ 147
+ D ++W P S P R +HS + +++ GG+N +D++ +
Sbjct: 227 EF-DETDWSWETPFLHSSSPPPRSNHSVTLVQGKIFVHGGHND--TGPLSDLWLFDLETL 283
Query: 148 EWARVIPHGAPPTKRRRQSCIIKGDTLIMFGG 179
W V G P R DT+ ++GG
Sbjct: 284 SWTEVRSIGRFPGPREGHQATTIDDTVYIYGG 315
Score = 38.1 bits (87), Expect = 0.033, Method: Composition-based stats.
Identities = 34/123 (27%), Positives = 51/123 (41%), Gaps = 16/123 (13%)
Query: 63 MYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPN--TTGSVPVGRRSHSAFVYGD 120
MY+ GGR ++S + +S L LDL T N P R HS D
Sbjct: 74 MYLHGGR-EKSGISNS--------LFKLDLDSCTVYSHNRGEDNDSP-ARVGHSIVCSAD 123
Query: 121 GLYIFGGYNGLVEEHY----NDIYRYCTRRQEWARVIPHGAPPTKRRRQSCIIKGDTLIM 176
+Y+FGG + + + N +Y Y + +W V P+ R S ++ L +
Sbjct: 124 TIYLFGGCDSETDSTFEVGDNSLYAYNFKSNQWNLVSTQSPLPSPRTGHSMLLVDSKLWI 183
Query: 177 FGG 179
FGG
Sbjct: 184 FGG 186
>sp|Q921I2|KLDC4_MOUSE Kelch domain-containing protein 4 OS=Mus musculus GN=Klhdc4 PE=1
SV=2
Length = 584
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 15/124 (12%)
Query: 47 PPSYRDFHTANII---DGRMYIWGGR---GDESSLYHSGSEVYCPDLVYLDLKYFTWIRP 100
PP R H A ++ G+++++GG D YH DL L L TW +
Sbjct: 115 PPPRRCAHQAVVVPQGGGQLWVFGGEFASPDGEQFYHY------KDLWVLHLATKTWEQI 168
Query: 101 NTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEH--YNDIYRYCTRRQEWARVIPHGAP 158
+TG P GR H + L +FGG++ ++ Y+D+Y + +W+++ P GA
Sbjct: 169 RSTGG-PSGRSGHRMVAWKRQLILFGGFHESARDYIYYSDVYTFSLDTFQWSKLSPSGAG 227
Query: 159 PTKR 162
PT R
Sbjct: 228 PTPR 231
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Query: 112 SHSAFVYGDGLYIFGG--YNGLVEEHYNDIYRYCTRRQEWARVIPHGAPPTKRRRQSCII 169
S SA D L +FGG +NG YN++Y Y R+ W +V G PP + Q+ ++
Sbjct: 68 SLSAHPEKDELILFGGEYFNGQKTFMYNELYIYSIRKDTWTKVDIPGPPPRRCAHQAVVV 127
Query: 170 K--GDTLIMFGG 179
G L +FGG
Sbjct: 128 PQGGGQLWVFGG 139
Score = 33.1 bits (74), Expect = 1.0, Method: Composition-based stats.
Identities = 46/205 (22%), Positives = 78/205 (38%), Gaps = 43/205 (20%)
Query: 11 PRRVNHAAVL---NDNKIFTFGGYCSGED-------------------YVKRRPMDGEPP 48
PRR H AV+ +++ FGG + D + + R G P
Sbjct: 117 PRRCAHQAVVVPQGGGQLWVFGGEFASPDGEQFYHYKDLWVLHLATKTWEQIRSTGG--P 174
Query: 49 SYRDFHTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPV 108
S R H ++ ++GG + + Y +Y D+ L F W + + +G+ P
Sbjct: 175 SGRSGHRMVAWKRQLILFGGFHESARDY-----IYYSDVYTFSLDTFQWSKLSPSGAGPT 229
Query: 109 GRRSHSAFVYGDG-LYIFGGYNGL-----VEEHYNDIYRYCTRRQE-------WARVIPH 155
R V G + I+GGY+ V++ + + E W R+ P
Sbjct: 230 PRSGCLMAVTPQGSIAIYGGYSKQRVKKDVDKGTQHSDMFLLKPAEGGEGKWAWTRINPS 289
Query: 156 GAPPTKRRRQSCIIKGD-TLIMFGG 179
G PT R S + + +++FGG
Sbjct: 290 GVKPTARSGFSVAVAPNHQILVFGG 314
>sp|Q9Y5Z7|HCFC2_HUMAN Host cell factor 2 OS=Homo sapiens GN=HCFC2 PE=1 SV=1
Length = 792
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 45/147 (30%), Positives = 64/147 (43%), Gaps = 41/147 (27%)
Query: 13 RVNHAAVLNDNKIFTFGGYCS-GEDYVKRRP------------------------MDGEP 47
R+ H+ L NK + FGG + ED P G
Sbjct: 127 RLGHSFSLYGNKCYLFGGLANESEDSNNNVPRYLNDFYELELQHGSGVVGWSIPVTKGVV 186
Query: 48 PSYRDFHTANII------DGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPN 101
PS R+ HTA I +MY++GG G+ + DL LDL+ +W +P
Sbjct: 187 PSPRESHTAVIYCKKDSGSPKMYVFGGM--------CGARL--DDLWQLDLETMSWSKPE 236
Query: 102 TTGSVPVGRRSHSAFVYGDGLYIFGGY 128
T G+VP+ R H+A V G+ +YIFGG+
Sbjct: 237 TKGTVPLPRSLHTASVIGNKMYIFGGW 263
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 63/136 (46%), Gaps = 13/136 (9%)
Query: 54 HTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFT----WIRPNTTGSVPVG 109
H+ ++ + Y++GG +ES ++ Y D L+L++ + W P T G VP
Sbjct: 130 HSFSLYGNKCYLFGGLANESEDSNNNVPRYLNDFYELELQHGSGVVGWSIPVTKGVVPSP 189
Query: 110 RRSHSAFVY------GDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPHGAPPTKRR 163
R SH+A +Y +Y+FGG G +D+++ W++ G P R
Sbjct: 190 RESHTAVIYCKKDSGSPKMYVFGGMCG---ARLDDLWQLDLETMSWSKPETKGTVPLPRS 246
Query: 164 RQSCIIKGDTLIMFGG 179
+ + G+ + +FGG
Sbjct: 247 LHTASVIGNKMYIFGG 262
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 44/160 (27%), Positives = 64/160 (40%), Gaps = 33/160 (20%)
Query: 3 WTVHLTGG----PRRVNHAAVL------NDNKIFTFGGYCSG----------EDYVKRRP 42
W++ +T G PR +H AV+ K++ FGG C E +P
Sbjct: 177 WSIPVTKGVVPSPRE-SHTAVIYCKKDSGSPKMYVFGGMCGARLDDLWQLDLETMSWSKP 235
Query: 43 -MDGEPPSYRDFHTANIIDGRMYIWGG----RGDESSLYHSGSEVYC-PDLVYLDLKYFT 96
G P R HTA++I +MYI+GG +G+ + E C YL+L
Sbjct: 236 ETKGTVPLPRSLHTASVIGNKMYIFGGWVPHKGENTETSPHDCEWRCTSSFSYLNLDTTE 295
Query: 97 WI------RPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNG 130
W + + S P R H A G LY + G +G
Sbjct: 296 WTTLVSDSQEDKKNSRPRPRAGHCAVAIGTRLYFWSGRDG 335
Score = 34.3 bits (77), Expect = 0.41, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 43/110 (39%), Gaps = 15/110 (13%)
Query: 45 GEPPSYRDFHTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTG 104
G P R H A I M I+GG G+E +L + W P G
Sbjct: 17 GPVPRARHGHRAVAIRELMIIFGG----------GNEGIADELHVYNTATNQWFLPAVRG 66
Query: 105 SVPVGRRSHSAFVYGDGLYIFGGYNGLVE--EHYNDIYRYCTRRQEWARV 152
+P G +H G + +FG G+VE + N++Y R W +V
Sbjct: 67 DIPPGCAAHGFVCDGTRILVFG---GMVEYGRYSNELYELQASRWLWKKV 113
Score = 33.9 bits (76), Expect = 0.53, Method: Composition-based stats.
Identities = 38/129 (29%), Positives = 52/129 (40%), Gaps = 43/129 (33%)
Query: 1 MHWTVHLTGG----PRRVNHAAVLNDNKIFTFGGYC--SGEDYVKRRPMDGE-------- 46
M W+ T G PR ++ A+V+ NK++ FGG+ GE+ + P D E
Sbjct: 230 MSWSKPETKGTVPLPRSLHTASVIG-NKMYIFGGWVPHKGEN-TETSPHDCEWRCTSSFS 287
Query: 47 -----------------------PPSYRDFHTANIIDGRMYIWGGR-GDESSLYHSGSEV 82
P R H A I R+Y W GR G + +L S+V
Sbjct: 288 YLNLDTTEWTTLVSDSQEDKKNSRPRPRAGHCAVAIGTRLYFWSGRDGYKKAL---NSQV 344
Query: 83 YCPDLVYLD 91
C DL YLD
Sbjct: 345 CCKDLWYLD 353
Score = 33.5 bits (75), Expect = 0.70, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 6/87 (6%)
Query: 95 FTWIRPNT-TGSVPVGRRSHSAFVYGDGLYIFGGYN-GLVEEHYNDIYRYCTRRQEWARV 152
W R ++ TG VP R H A + + IFGG N G+ +E ++ Y T +W
Sbjct: 7 LNWRRVSSFTGPVPRARHGHRAVAIRELMIIFGGGNEGIADE----LHVYNTATNQWFLP 62
Query: 153 IPHGAPPTKRRRQSCIIKGDTLIMFGG 179
G P + G +++FGG
Sbjct: 63 AVRGDIPPGCAAHGFVCDGTRILVFGG 89
Score = 33.5 bits (75), Expect = 0.86, Method: Composition-based stats.
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 17/87 (19%)
Query: 110 RRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQE-----------WARVIPHGAP 158
R HS +YG+ Y+FGG E+ N++ RY E W+ + G
Sbjct: 127 RLGHSFSLYGNKCYLFGGLANESEDSNNNVPRYLNDFYELELQHGSGVVGWSIPVTKGVV 186
Query: 159 PTKRRRQSCII--KGDT----LIMFGG 179
P+ R + +I K D+ + +FGG
Sbjct: 187 PSPRESHTAVIYCKKDSGSPKMYVFGG 213
>sp|Q8H4D4|TYW23_ORYSJ tRNA wybutosine-synthesizing protein 2/3/4 OS=Oryza sativa subsp.
japonica GN=Os07g0515000 PE=2 SV=1
Length = 1043
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 49/181 (27%), Positives = 73/181 (40%), Gaps = 24/181 (13%)
Query: 13 RVNHAAVLNDNKIFTFGGY-----CSGEDYVKRRPM-------DGEPPSYRDFHTANIID 60
R HAA D K++ FGG CS + + + D + P R H+
Sbjct: 400 RHRHAAAAVDRKVYVFGGLSDDGLCSCMNIMDTASIQWNVISPDDKWPCARHSHSLVSYG 459
Query: 61 GRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYGD 120
+++++GG + +L D D W + NT G P R SH F+Y D
Sbjct: 460 SKLFLFGGHDGQRAL---------NDFYSFDTTTLKWNKENTNGKAPSPRFSHCMFIYKD 510
Query: 121 GLYIFGGYNGLVEEHYNDIYRYCTRRQEWARV-IPHGAPPTKRRRQSCIIKGDTLIMFGG 179
L I GG + E +I + + W V IP + R S II D +I+ GG
Sbjct: 511 YLGILGGCP--IRESSQEIALLNLKHKIWFYVSIPSLSQCLCVRSSSVIIDDDLVIVGGG 568
Query: 180 S 180
+
Sbjct: 569 A 569
Score = 50.8 bits (120), Expect = 5e-06, Method: Composition-based stats.
Identities = 48/214 (22%), Positives = 74/214 (34%), Gaps = 58/214 (27%)
Query: 22 DNKIFTFGGYCSGEDYVKRR------PMDG--------EPPSYRDFHTANIIDGRMYIWG 67
++ I TFGG+ + +R P G PS R HT ++ +Y+ G
Sbjct: 306 EHHILTFGGFGGPGRHARRNYSLLVNPGSGLLTELKVTGSPSPRMGHTITVVGNDIYVVG 365
Query: 68 GRGDESSLY----------------------------HSGSEV--------------YCP 85
GR S + H+ + V C
Sbjct: 366 GRSGPSEILNDIWVLERSNNRWSKVDCSGDFFRPRHRHAAAAVDRKVYVFGGLSDDGLCS 425
Query: 86 DLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTR 145
+ +D W + P R SHS YG L++FGG++G + ND Y + T
Sbjct: 426 CMNIMDTASIQWNVISPDDKWPCARHSHSLVSYGSKLFLFGGHDG--QRALNDFYSFDTT 483
Query: 146 RQEWARVIPHGAPPTKRRRQSCIIKGDTLIMFGG 179
+W + +G P+ R I D L + GG
Sbjct: 484 TLKWNKENTNGKAPSPRFSHCMFIYKDYLGILGG 517
>sp|Q5RKG2|HCFC2_RAT Host cell factor 2 OS=Rattus norvegicus GN=Hcfc2 PE=2 SV=1
Length = 723
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/90 (38%), Positives = 49/90 (54%), Gaps = 16/90 (17%)
Query: 45 GEPPSYRDFHTANIIDGR------MYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWI 98
G PS R+ HTA I R MY++GG G+ + DL LDL+ +W
Sbjct: 184 GTVPSPRESHTAVIYCKRDSGSPKMYVFGGM--------CGARL--DDLWQLDLETMSWS 233
Query: 99 RPNTTGSVPVGRRSHSAFVYGDGLYIFGGY 128
+P T G+VP+ R H+A V G+ +YIFGG+
Sbjct: 234 KPETKGTVPLPRSLHTASVIGNKMYIFGGW 263
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 13/136 (9%)
Query: 54 HTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFT----WIRPNTTGSVPVG 109
H+ ++ + Y++ G +ES ++ Y D L+L++ + W P T G+VP
Sbjct: 130 HSFSLYGNKCYLFAGLANESEDSNNNVPRYLNDFYELELQHGSGVVGWSVPATKGTVPSP 189
Query: 110 RRSHSAFVY------GDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPHGAPPTKRR 163
R SH+A +Y +Y+FGG G +D+++ W++ G P R
Sbjct: 190 RESHTAVIYCKRDSGSPKMYVFGGMCG---ARLDDLWQLDLETMSWSKPETKGTVPLPRS 246
Query: 164 RQSCIIKGDTLIMFGG 179
+ + G+ + +FGG
Sbjct: 247 LHTASVIGNKMYIFGG 262
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 45/160 (28%), Positives = 63/160 (39%), Gaps = 33/160 (20%)
Query: 3 WTVHLTGG----PRRVNHAAVL------NDNKIFTFGGYCSG----------EDYVKRRP 42
W+V T G PR +H AV+ K++ FGG C E +P
Sbjct: 177 WSVPATKGTVPSPRE-SHTAVIYCKRDSGSPKMYVFGGMCGARLDDLWQLDLETMSWSKP 235
Query: 43 -MDGEPPSYRDFHTANIIDGRMYIWGG----RGDESSLYHSGSEVYC-PDLVYLDLKYFT 96
G P R HTA++I +MYI+GG +G+ + E C YL+L
Sbjct: 236 ETKGTVPLPRSLHTASVIGNKMYIFGGWVPHKGENTENSPHDCEWRCTSSFSYLNLDTAE 295
Query: 97 WI------RPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNG 130
W + + S P R H A G LY + G +G
Sbjct: 296 WTTLVSDSQEDKKNSRPRPRAGHCAVAIGTRLYFWSGRDG 335
Score = 34.3 bits (77), Expect = 0.47, Method: Composition-based stats.
Identities = 38/129 (29%), Positives = 52/129 (40%), Gaps = 43/129 (33%)
Query: 1 MHWTVHLTGG----PRRVNHAAVLNDNKIFTFGGYC--SGEDYVKRRPMDGE-------- 46
M W+ T G PR ++ A+V+ NK++ FGG+ GE+ + P D E
Sbjct: 230 MSWSKPETKGTVPLPRSLHTASVIG-NKMYIFGGWVPHKGEN-TENSPHDCEWRCTSSFS 287
Query: 47 -----------------------PPSYRDFHTANIIDGRMYIWGGR-GDESSLYHSGSEV 82
P R H A I R+Y W GR G + +L S+V
Sbjct: 288 YLNLDTAEWTTLVSDSQEDKKNSRPRPRAGHCAVAIGTRLYFWSGRDGYKKAL---NSQV 344
Query: 83 YCPDLVYLD 91
C DL YLD
Sbjct: 345 CCKDLWYLD 353
Score = 33.9 bits (76), Expect = 0.67, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 43/110 (39%), Gaps = 15/110 (13%)
Query: 45 GEPPSYRDFHTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTG 104
G P R H A I M I+GG G+E +L + W P G
Sbjct: 17 GPVPRARHGHRAVAIRELMIIFGG----------GNEGIADELHVYNTVTNQWFLPAVRG 66
Query: 105 SVPVGRRSHSAFVYGDGLYIFGGYNGLVE--EHYNDIYRYCTRRQEWARV 152
+P G +H G + +FG G+VE + N++Y R W +V
Sbjct: 67 DIPPGCAAHGFVCDGTRILVFG---GMVEYGRYSNELYELQASRWLWKKV 113
Score = 33.1 bits (74), Expect = 0.99, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 6/87 (6%)
Query: 95 FTWIRPNT-TGSVPVGRRSHSAFVYGDGLYIFGGYN-GLVEEHYNDIYRYCTRRQEWARV 152
W R ++ TG VP R H A + + IFGG N G+ +E ++ Y T +W
Sbjct: 7 LNWRRVSSFTGPVPRARHGHRAVAIRELMIIFGGGNEGIADE----LHVYNTVTNQWFLP 62
Query: 153 IPHGAPPTKRRRQSCIIKGDTLIMFGG 179
G P + G +++FGG
Sbjct: 63 AVRGDIPPGCAAHGFVCDGTRILVFGG 89
>sp|Q9V4C8|HCF_DROME Host cell factor OS=Drosophila melanogaster GN=Hcf PE=1 SV=2
Length = 1500
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/149 (26%), Positives = 62/149 (41%), Gaps = 14/149 (9%)
Query: 42 PMDGEPPSYRDFHTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYF-----T 96
P G P R H+ ++ +++++GG +ES + Y DL LD +
Sbjct: 169 PDSGLSPCPRLGHSFTMVGEKIFLFGGLANESDDPKNNIPKYLNDLYILDTRGVHSHNGK 228
Query: 97 WIRPNTTGSVPVGRRSHSAFVYGD------GLYIFGGYNGLVEEHYNDIYRYCTRRQEWA 150
WI P T G P R SH+ + L I+GG +G D++ T W+
Sbjct: 229 WIVPKTYGDSPPPRESHTGISFATKSNGNLNLLIYGGMSGC---RLGDLWLLETDSMTWS 285
Query: 151 RVIPHGAPPTKRRRQSCIIKGDTLIMFGG 179
+ G P R S + G+ + +FGG
Sbjct: 286 KPKTSGEAPLPRSLHSSTMIGNKMYVFGG 314
Score = 49.7 bits (117), Expect = 9e-06, Method: Composition-based stats.
Identities = 44/164 (26%), Positives = 65/164 (39%), Gaps = 37/164 (22%)
Query: 13 RVNHAAVLNDNKIFTFGGYCSGEDYVKRR--------------------------PMDGE 46
R+ H+ + KIF FGG + D K G+
Sbjct: 178 RLGHSFTMVGEKIFLFGGLANESDDPKNNIPKYLNDLYILDTRGVHSHNGKWIVPKTYGD 237
Query: 47 PPSYRDFHTANIIDGRMYIWGGRGDESSLYHSG-SEVYCPDLVYLDLKYFTWIRPNTTGS 105
P R+ HT G + G+ + L + G S DL L+ TW +P T+G
Sbjct: 238 SPPPRESHT-----GISFATKSNGNLNLLIYGGMSGCRLGDLWLLETDSMTWSKPKTSGE 292
Query: 106 VPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEW 149
P+ R HS+ + G+ +Y+FGG+ LV ND T +EW
Sbjct: 293 APLPRSLHSSTMIGNKMYVFGGWVPLV---IND--SKSTTEREW 331
Score = 47.0 bits (110), Expect = 7e-05, Method: Composition-based stats.
Identities = 37/141 (26%), Positives = 60/141 (42%), Gaps = 19/141 (13%)
Query: 45 GEPPSYRDFHTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTG 104
G P R H A I M ++GG G+E +L + W P G
Sbjct: 68 GPQPRPRHGHRAINIKELMVVFGG----------GNEGIVDELHVYNTVTNQWYVPVLKG 117
Query: 105 SVPVGRRSHSAFVYGDGLYIFGGYNGLVE--EHYNDIYRYCTRRQEWARVIPH----GAP 158
VP G ++ V G +++FG G++E ++ N++Y + EW ++ P G
Sbjct: 118 DVPNGCAAYGFVVEGTRMFVFG---GMIEYGKYSNELYELQATKWEWRKMYPESPDSGLS 174
Query: 159 PTKRRRQSCIIKGDTLIMFGG 179
P R S + G+ + +FGG
Sbjct: 175 PCPRLGHSFTMVGEKIFLFGG 195
Score = 43.5 bits (101), Expect = 7e-04, Method: Composition-based stats.
Identities = 41/150 (27%), Positives = 63/150 (42%), Gaps = 16/150 (10%)
Query: 34 GEDYVKRRPMDGEPPSYRDFHTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLD-- 91
G D+V GE S D ++ +II + + R ++ PD LD
Sbjct: 3 GSDFVDPAFSSGERISASDLNSEHIIQAENHSFANR--------ISMDMDVPDGHQLDSN 54
Query: 92 LKYFTWIRP-NTTGSVPVGRRSHSAFVYGDGLYIFGGYN-GLVEEHYNDIYRYCTRRQEW 149
L F W R N TG P R H A + + +FGG N G+V+E ++ Y T +W
Sbjct: 55 LTGFRWKRVLNPTGPQPRPRHGHRAINIKELMVVFGGGNEGIVDE----LHVYNTVTNQW 110
Query: 150 ARVIPHGAPPTKRRRQSCIIKGDTLIMFGG 179
+ G P +++G + +FGG
Sbjct: 111 YVPVLKGDVPNGCAAYGFVVEGTRMFVFGG 140
Score = 39.7 bits (91), Expect = 0.012, Method: Composition-based stats.
Identities = 31/97 (31%), Positives = 44/97 (45%), Gaps = 15/97 (15%)
Query: 45 GEPPSYRDFHTANIIDGRMYIWGGR-----GDESSLYHSGSEVYCPD-LVYLDLKYFTWI 98
GE P R H++ +I +MY++GG D S + E C + L LDL+ TW
Sbjct: 291 GEAPLPRSLHSSTMIGNKMYVFGGWVPLVINDSKST--TEREWKCTNTLAVLDLETMTW- 347
Query: 99 RPNTT-----GSVPVGRRSHSAFVYGDGLYIFGGYNG 130
N T +VP R H A LY++ G +G
Sbjct: 348 -ENVTLDTVEENVPRARAGHCAVGIQSRLYVWSGRDG 383
Score = 34.3 bits (77), Expect = 0.44, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 50/124 (40%), Gaps = 35/124 (28%)
Query: 1 MHWTVHLTGG----PRRVNHAAVLNDNKIFTFGGY-----------------CSGE---- 35
M W+ T G PR + H++ + NK++ FGG+ C+
Sbjct: 282 MTWSKPKTSGEAPLPRSL-HSSTMIGNKMYVFGGWVPLVINDSKSTTEREWKCTNTLAVL 340
Query: 36 -------DYVKRRPMDGEPPSYRDFHTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLV 88
+ V ++ P R H A I R+Y+W GR ++ ++V C DL
Sbjct: 341 DLETMTWENVTLDTVEENVPRARAGHCAVGIQSRLYVWSGRDGYRKAWN--NQVCCKDLW 398
Query: 89 YLDL 92
YL++
Sbjct: 399 YLEV 402
>sp|Q5R8W1|KLDC4_PONAB Kelch domain-containing protein 4 OS=Pongo abelii GN=KLHDC4 PE=2
SV=1
Length = 522
Score = 53.1 bits (126), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 12/140 (8%)
Query: 47 PPSYRDFHTANIID---GRMYIWGGRGDESSLYHSGSEVY-CPDLVYLDLKYFTWIRPNT 102
PP R H A ++ G+++++GG + G + Y DL L L TW + +
Sbjct: 115 PPPRRCAHQAVVVPQGGGQLWVFGGEFASPN----GEQFYHYKDLWVLHLATKTWEQVKS 170
Query: 103 TGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEH--YNDIYRYCTRRQEWARVIPHGAPPT 160
TGS P GR H + L +FGG++ ++ YND+Y + W+++ P G PT
Sbjct: 171 TGS-PSGRSGHRMVAWKRQLILFGGFHESTRDYIYYNDVYTFNLDTFTWSKLSPSGTGPT 229
Query: 161 KRRR-QSCIIKGDTLIMFGG 179
R Q + +I++GG
Sbjct: 230 PRSGCQMSVTPQGGIIIYGG 249
Score = 38.1 bits (87), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Query: 90 LDLKYFTWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGG--YNGLVEEHYNDIYRYCTRRQ 147
LD K + P S S D L +FGG +NG YN++Y Y R+
Sbjct: 46 LDAKRTQTVEAPCPPPSPRLNASLSVHPEKDELILFGGEYFNGQKTFLYNELYVYNIRKD 105
Query: 148 EWARVIPHGAPPTKRRRQSCIIK--GDTLIMFGG 179
W +V PP + Q+ ++ G L +FGG
Sbjct: 106 TWTKVDIPSPPPRRCAHQAVVVPQGGGQLWVFGG 139
>sp|Q55A09|Y9963_DICDI Probable serine/threonine-protein kinase DDB_G0272254
OS=Dictyostelium discoideum GN=DDB_G0272254 PE=3 SV=1
Length = 1331
Score = 52.4 bits (124), Expect = 2e-06, Method: Composition-based stats.
Identities = 39/127 (30%), Positives = 61/127 (48%), Gaps = 17/127 (13%)
Query: 59 IDGRMYIWGGRGDESSLYHSG---SEVYCPDLVYLDLKYFTWIRPNTTGS-VPVGRRSHS 114
I + Y++GG Y +G +++Y L +D W P +G +P R H+
Sbjct: 713 IGNKFYLFGG-------YVAGKLSNKLYV--LTIMDDSTVHWSSPRISGGCIPSPRYGHT 763
Query: 115 AFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARV--IPHGAPPTKRRRQSCIIKGD 172
YG+ +FGGY+G E+ ND+Y W+ V I G P++R + I G+
Sbjct: 764 FTRYGNRFLLFGGYDG--EQCLNDLYILEPETMCWSTVTNIKGGQTPSERFGHTSTILGE 821
Query: 173 TLIMFGG 179
LI+FGG
Sbjct: 822 KLIIFGG 828
Score = 32.7 bits (73), Expect = 1.3, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 18/88 (20%)
Query: 1 MHWTV-HLTGG---PRRVNHAAVLNDNKIFTFGGY----CSGEDYVKRRPM--------- 43
+HW+ ++GG R H N+ FGGY C + Y+
Sbjct: 743 VHWSSPRISGGCIPSPRYGHTFTRYGNRFLLFGGYDGEQCLNDLYILEPETMCWSTVTNI 802
Query: 44 -DGEPPSYRDFHTANIIDGRMYIWGGRG 70
G+ PS R HT+ I+ ++ I+GG+G
Sbjct: 803 KGGQTPSERFGHTSTILGEKLIIFGGKG 830
>sp|Q4V8F4|RABEK_RAT Rab9 effector protein with kelch motifs OS=Rattus norvegicus
GN=Rabepk PE=2 SV=1
Length = 372
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 54/120 (45%), Gaps = 13/120 (10%)
Query: 43 MDGEPPSYRDFHTANI-IDGRMYIWGG--RGDESSLYHSGSEVYCPDLVYLDLKYFTWIR 99
+ G PPS R FHT++ I +Y++GG RG + V L D TW +
Sbjct: 131 VTGCPPSPRTFHTSSAAIGNHLYVFGGGERGAQP--------VQDVKLHVFDANTLTWAQ 182
Query: 100 PNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPHGAPP 159
P T GS P R H+ G L+I GG G + ++D++ W ++ P G P
Sbjct: 183 PETHGSPPSPRHGHAMVAAGTKLFIHGGLAG--DRFFDDLHCIDIGDMSWQKLGPTGTAP 240
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 70/175 (40%), Gaps = 27/175 (15%)
Query: 11 PRRVNHAAVLNDNKIFTFGGYCSGEDYVK---------------RRPMDGEPPSYRDFHT 55
PR + ++ N ++ FGG G V+ + G PPS R H
Sbjct: 138 PRTFHTSSAAIGNHLYVFGGGERGAQPVQDVKLHVFDANTLTWAQPETHGSPPSPRHGHA 197
Query: 56 ANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSA 115
+++I GG + + DL +D+ +W + TG+ PVG +H+A
Sbjct: 198 MVAAGTKLFIHGGLAGDR---------FFDDLHCIDIGDMSWQKLGPTGTAPVGCAAHAA 248
Query: 116 FVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARV-IPHGAPPTKRRRQSCII 169
G +Y+FGG N +Y+Y T +Q W + PP + C+I
Sbjct: 249 VAVGHHVYVFGGMT--ATGALNTMYKYHTEKQHWTILQFDTSLPPGRLDHSMCVI 301
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 2/95 (2%)
Query: 87 LVYLDLKYFTWIRPNTTGSVPVGRRSH-SAFVYGDGLYIFGG-YNGLVEEHYNDIYRYCT 144
L ++ + TW P TG P R H S+ G+ LY+FGG G ++ +
Sbjct: 116 LQVMNPEARTWSTPEVTGCPPSPRTFHTSSAAIGNHLYVFGGGERGAQPVQDVKLHVFDA 175
Query: 145 RRQEWARVIPHGAPPTKRRRQSCIIKGDTLIMFGG 179
WA+ HG+PP+ R + + G L + GG
Sbjct: 176 NTLTWAQPETHGSPPSPRHGHAMVAAGTKLFIHGG 210
>sp|Q9WU60|ATRN_MOUSE Attractin OS=Mus musculus GN=Atrn PE=2 SV=3
Length = 1428
Score = 51.2 bits (121), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 50 YRDFHTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTW-IRPNTTGSVPV 108
+R HTA I+ G M ++GG + G++ + D + D+ W + P V
Sbjct: 552 FRYLHTAVIVSGTMLVFGGNTHNDTSMSHGAKCFSSDFMAYDIACDRWSVLPRPELHHDV 611
Query: 109 GRRSHSAFVYGDGLYIFGGYNGLV 132
R HSA +Y +Y+FGG+N L+
Sbjct: 612 NRFGHSAVLYNSTMYVFGGFNSLL 635
>sp|Q8W420|ADO2_ARATH Adagio protein 2 OS=Arabidopsis thaliana GN=ADO2 PE=1 SV=1
Length = 611
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 89/198 (44%), Gaps = 35/198 (17%)
Query: 11 PRRVNHA-AVLNDNKIFTFGGYCSG--EDYVKRRPMDGEPPSYRD-----------FHTA 56
P R H + +N +++ FGGY S + V +D +PPS+R+ +H++
Sbjct: 344 PGRWGHTLSCVNGSRLVVFGGYGSHGLLNDVFLLDLDADPPSWREVSGLAPPIPRSWHSS 403
Query: 57 NIIDG-RMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSA 115
+DG ++ + GG D +L S+ + L+ L + W R P R H+
Sbjct: 404 CTLDGTKLIVSGGCADSGALL---SDTF---LLDLSMDIPAW-REIPVPWTPPSRLGHTL 456
Query: 116 FVYGD-GLYIFGGY--NGLVEEHYNDIYRYCTRRQE--WARVIPHG--------APPTKR 162
VYGD + +FGG NG + ND+Y E W VI +G APP +
Sbjct: 457 TVYGDRKILMFGGLAKNGTLRFRSNDVYTMDLSEDEPSWRPVIGYGSSLPGGMAAPPPRL 516
Query: 163 RRQSCIIKGDTLIMFGGS 180
+ + G +++FGGS
Sbjct: 517 DHVAISLPGGRILIFGGS 534
Score = 36.2 bits (82), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Query: 96 TWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYND--IYRYCTRRQEWARVI 153
W + + G+V R + SA G+ + IFGG G+ + ND + + EW V+
Sbjct: 280 AWRKFSVGGTVEPSRCNFSACAVGNRIVIFGG-EGVNMQPMNDTFVLDLGSSSPEWKSVL 338
Query: 154 PHGAPPTKRRRQSCIIKGDTLIMFGG 179
PP + + G L++FGG
Sbjct: 339 VSSPPPGRWGHTLSCVNGSRLVVFGG 364
Score = 32.0 bits (71), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 60/138 (43%), Gaps = 19/138 (13%)
Query: 48 PSYRDFHTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFT--WIRPNTTGS 105
PS +F +A + R+ I+GG G + D LDL + W + S
Sbjct: 292 PSRCNF-SACAVGNRIVIFGGEGVNMQPMN--------DTFVLDLGSSSPEW-KSVLVSS 341
Query: 106 VPVGRRSHS-AFVYGDGLYIFGGY--NGLVEEHYNDIYRYCTRRQEWARVIPHGAPPTKR 162
P GR H+ + V G L +FGGY +GL+ + + + W R + APP R
Sbjct: 342 PPPGRWGHTLSCVNGSRLVVFGGYGSHGLLNDVF--LLDLDADPPSW-REVSGLAPPIPR 398
Query: 163 R-RQSCIIKGDTLIMFGG 179
SC + G LI+ GG
Sbjct: 399 SWHSSCTLDGTKLIVSGG 416
>sp|Q8TBB5|KLDC4_HUMAN Kelch domain-containing protein 4 OS=Homo sapiens GN=KLHDC4 PE=1
SV=1
Length = 520
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 12/140 (8%)
Query: 47 PPSYRDFHTANIID---GRMYIWGGRGDESSLYHSGSEVY-CPDLVYLDLKYFTWIRPNT 102
PP R H A ++ G+++++GG +G + Y DL L L TW + +
Sbjct: 115 PPPRRCAHQAVVVPQGGGQLWVFGGE----FASPNGEQFYHYKDLWVLHLATKTWEQVKS 170
Query: 103 TGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEH--YNDIYRYCTRRQEWARVIPHGAPPT 160
TG P GR H + L +FGG++ ++ YND+Y + W+++ P G PT
Sbjct: 171 TGG-PSGRSGHRMVAWKRQLILFGGFHESTRDYIYYNDVYAFNLDTFTWSKLSPSGTGPT 229
Query: 161 KRRR-QSCIIKGDTLIMFGG 179
R Q + ++++GG
Sbjct: 230 PRSGCQMSVTPQGGIVVYGG 249
Score = 39.7 bits (91), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 120 DGLYIFGG--YNGLVEEHYNDIYRYCTRRQEWARVIPHGAPPTKRRRQSCIIK--GDTLI 175
D L +FGG +NG YN++Y Y TR+ W +V PP + Q+ ++ G L
Sbjct: 76 DELILFGGEYFNGQKTFLYNELYVYNTRKDTWTKVDIPSPPPRRCAHQAVVVPQGGGQLW 135
Query: 176 MFGGS 180
+FGG
Sbjct: 136 VFGGE 140
Score = 31.6 bits (70), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 61/145 (42%), Gaps = 18/145 (12%)
Query: 48 PSYRDFHTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVP 107
PS R H ++ ++GG + + Y +Y D+ +L FTW + + +G+ P
Sbjct: 174 PSGRSGHRMVAWKRQLILFGGFHESTRDY-----IYYNDVYAFNLDTFTWSKLSPSGTGP 228
Query: 108 VGRRSHSAFVYGDG-LYIFGGYNGL-VEEHYNDIYRYCTR--------RQE---WARVIP 154
R V G + ++GGY+ V++ + R+ R++ W R+ P
Sbjct: 229 TPRSGCQMSVTPQGGIVVYGGYSKQRVKKDVDKGTRHSDMFLLKPEDGREDKWVWTRMNP 288
Query: 155 HGAPPTKRRRQSCIIKGDTLIMFGG 179
G PT R S + + +F G
Sbjct: 289 SGVKPTPRSGFSVAMAPNHQTLFFG 313
>sp|Q99J86|ATRN_RAT Attractin OS=Rattus norvegicus GN=Atrn PE=2 SV=1
Length = 1432
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 50 YRDFHTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTW-IRPNTTGSVPV 108
+R HTA I+ G M ++GG + G++ + D + D+ W + P V
Sbjct: 556 FRYLHTAVIVSGTMLVFGGNTHNDTSMSHGAKCFSSDFMAYDIACDRWSVLPRPELHHDV 615
Query: 109 GRRSHSAFVYGDGLYIFGGYNGLV 132
R HSA ++ +Y+FGG+N L+
Sbjct: 616 NRFGHSAVLHNSTMYVFGGFNSLL 639
>sp|O75882|ATRN_HUMAN Attractin OS=Homo sapiens GN=ATRN PE=1 SV=2
Length = 1429
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 50 YRDFHTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTW-IRPNTTGSVPV 108
+R HTA I+ G M ++GG + G++ + D + D+ W + P V
Sbjct: 553 FRYLHTAVIVSGTMLVFGGNTHNDTSMSHGAKCFSSDFMAYDIACDRWSVLPRPDLHHDV 612
Query: 109 GRRSHSAFVYGDGLYIFGGYNGLV 132
R HSA ++ +Y+FGG+N L+
Sbjct: 613 NRFGHSAVLHNSTMYVFGGFNSLL 636
>sp|Q5VV63|ATRN1_HUMAN Attractin-like protein 1 OS=Homo sapiens GN=ATRNL1 PE=2 SV=2
Length = 1379
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 51 RDFHTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTW-IRPNTTGSVPVG 109
R H+A +I+G M I+GG + +G++ + D + D+ W I P V
Sbjct: 521 RYLHSAVLINGAMLIFGGNTHNDTSLSNGAKCFSADFLAYDIACDEWKILPKPNLHRDVN 580
Query: 110 RRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRY 142
R HSA V +YIFGG++ ++ NDI Y
Sbjct: 581 RFGHSAVVINGSMYIFGGFSSVL---LNDILVY 610
Score = 39.3 bits (90), Expect = 0.014, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 96 TWIRPNTTGSVPVGRRSHSAFVYGD---GLYIFGGYNGLVEEHY---NDIYRYCTRRQEW 149
TW+ P T G++ G H++ VY + +Y+ GGY L Y +D+Y+Y + W
Sbjct: 453 TWLVPETKGAIVQGGYGHTS-VYDEITKSIYVHGGYKALPGNKYGLVDDLYKYEVNTKTW 511
Query: 150 ARVIPHGAPPTKRRRQSCIIKGDTLIMFGGS 180
+ G R S ++ +++FGG+
Sbjct: 512 TILKESG---FARYLHSAVLINGAMLIFGGN 539
Score = 37.0 bits (84), Expect = 0.068, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 3/84 (3%)
Query: 97 WIRPNTTGSVP-VGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPH 155
WI PN P VGR SH A ++G +++ GGY + + Y W P
Sbjct: 291 WILPNVKPFSPSVGRASHKAVLHGKFMWVIGGYT-FNYSSFQMVLNYNLESSIWNVGTPS 349
Query: 156 GAPPTKRRRQSCIIKGDTLIMFGG 179
P +R S + + + M+GG
Sbjct: 350 RG-PLQRYGHSLALYQENIFMYGG 372
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.143 0.478
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,939,259
Number of Sequences: 539616
Number of extensions: 3872357
Number of successful extensions: 6657
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 160
Number of HSP's that attempted gapping in prelim test: 5838
Number of HSP's gapped (non-prelim): 620
length of query: 180
length of database: 191,569,459
effective HSP length: 110
effective length of query: 70
effective length of database: 132,211,699
effective search space: 9254818930
effective search space used: 9254818930
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)