Query psy8877
Match_columns 180
No_of_seqs 133 out of 1441
Neff 10.8
Searched_HMMs 29240
Date Fri Aug 16 21:39:05 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8877.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8877hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2xn4_A Kelch-like protein 2; s 100.0 5.8E-34 2E-38 207.0 21.3 165 1-180 40-213 (302)
2 4asc_A Kelch repeat and BTB do 100.0 7.9E-34 2.7E-38 207.5 20.9 164 1-180 77-252 (315)
3 2woz_A Kelch repeat and BTB do 100.0 1E-33 3.6E-38 207.1 20.0 164 1-180 88-262 (318)
4 1zgk_A Kelch-like ECH-associat 100.0 2.3E-33 7.9E-38 204.5 21.0 163 1-180 100-271 (308)
5 3ii7_A Kelch-like protein 7; p 100.0 2.8E-33 9.5E-38 203.8 21.3 165 1-180 34-209 (306)
6 3ii7_A Kelch-like protein 7; p 100.0 2.4E-33 8.3E-38 204.1 20.5 167 1-180 80-256 (306)
7 2xn4_A Kelch-like protein 2; s 100.0 4.1E-33 1.4E-37 202.5 21.5 165 1-180 87-260 (302)
8 1zgk_A Kelch-like ECH-associat 100.0 2.4E-33 8.3E-38 204.4 19.4 163 1-180 49-224 (308)
9 2vpj_A Kelch-like protein 12; 100.0 7.2E-33 2.4E-37 201.1 21.4 162 2-180 92-262 (301)
10 2vpj_A Kelch-like protein 12; 100.0 1.3E-32 4.3E-37 199.8 21.8 163 1-180 41-215 (301)
11 4asc_A Kelch repeat and BTB do 100.0 7.2E-32 2.5E-36 197.1 18.3 166 1-180 23-205 (315)
12 2woz_A Kelch repeat and BTB do 100.0 3.3E-31 1.1E-35 193.8 18.7 166 1-180 34-215 (318)
13 2uvk_A YJHT; unknown function, 100.0 8.1E-31 2.8E-35 194.5 18.4 174 1-179 43-260 (357)
14 2uvk_A YJHT; unknown function, 100.0 5.4E-30 1.9E-34 190.0 19.4 161 5-179 2-208 (357)
15 2zwa_A Leucine carboxyl methyl 100.0 3.2E-30 1.1E-34 205.7 18.4 166 1-180 422-616 (695)
16 2zwa_A Leucine carboxyl methyl 100.0 6.9E-29 2.4E-33 198.1 17.5 160 3-180 379-559 (695)
17 1k3i_A Galactose oxidase precu 99.9 8.8E-24 3E-28 168.0 15.9 169 1-179 275-529 (656)
18 1k3i_A Galactose oxidase precu 99.9 1.1E-22 3.8E-27 161.7 14.2 166 1-179 229-474 (656)
19 3mbr_X Glutamine cyclotransfer 97.2 0.03 1E-06 39.0 15.1 111 10-151 18-138 (243)
20 3mbr_X Glutamine cyclotransfer 96.7 0.077 2.6E-06 36.9 14.6 82 48-151 18-99 (243)
21 3nok_A Glutaminyl cyclase; bet 96.5 0.12 4.1E-06 36.5 14.7 107 12-151 54-169 (268)
22 3nol_A Glutamine cyclotransfer 96.5 0.12 4.1E-06 36.4 13.4 108 12-150 42-159 (262)
23 3nol_A Glutamine cyclotransfer 95.8 0.29 9.8E-06 34.5 12.6 78 52-151 44-121 (262)
24 2iwa_A Glutamine cyclotransfer 93.7 1.2 4.2E-05 31.3 14.2 108 14-151 22-140 (266)
25 3nok_A Glutaminyl cyclase; bet 93.7 1.3 4.3E-05 31.3 12.2 96 53-178 57-152 (268)
26 3ju4_A Endo-N-acetylneuraminid 93.6 1.7 5.9E-05 32.8 13.9 114 2-127 271-405 (670)
27 3dsm_A Uncharacterized protein 92.7 2 6.7E-05 30.8 15.2 116 13-154 44-169 (328)
28 2iwa_A Glutamine cyclotransfer 91.0 3 0.0001 29.3 13.4 75 54-150 24-99 (266)
29 3q7m_A Lipoprotein YFGL, BAMB; 86.3 7.6 0.00026 28.1 15.8 109 16-153 47-171 (376)
30 3g4e_A Regucalcin; six bladed 86.3 6.4 0.00022 27.5 8.8 57 85-155 35-91 (297)
31 3dsm_A Uncharacterized protein 86.2 7.3 0.00025 27.8 14.1 99 53-177 46-146 (328)
32 3v9f_A Two-component system se 78.1 21 0.00073 28.9 9.8 83 85-178 515-600 (781)
33 4a2l_A BT_4663, two-component 77.9 20 0.00068 29.1 9.6 82 86-177 563-647 (795)
34 3v9f_A Two-component system se 77.2 19 0.00064 29.2 9.3 81 86-176 559-643 (781)
35 3c7x_A Matrix metalloproteinas 73.3 17 0.00059 24.1 9.5 75 47-148 95-177 (196)
36 1itv_A MMP9; adaptive molecula 68.6 23 0.00078 23.5 11.8 137 15-179 9-164 (195)
37 1gen_A Gelatinase A; hydrolase 68.2 25 0.00085 23.8 12.2 107 15-148 33-155 (218)
38 1k8k_C P40, ARP2/3 complex 41 64.8 34 0.0012 24.1 7.5 62 85-154 30-91 (372)
39 1nir_A Nitrite reductase; hemo 63.7 49 0.0017 25.6 8.7 58 85-154 302-363 (543)
40 1rwi_B Serine/threonine-protei 61.5 33 0.0011 22.9 8.3 56 85-152 46-102 (270)
41 1p22_A F-BOX/WD-repeat protein 61.2 46 0.0016 24.4 10.4 67 59-151 141-207 (435)
42 1pex_A Collagenase-3, MMP-13; 61.1 34 0.0012 22.9 14.7 52 119-179 127-182 (207)
43 3q7m_A Lipoprotein YFGL, BAMB; 60.4 44 0.0015 23.9 17.7 91 55-178 272-366 (376)
44 4a2l_A BT_4663, two-component 59.6 69 0.0024 25.9 9.3 60 85-155 517-580 (795)
45 3e5z_A Putative gluconolactona 59.0 39 0.0013 23.2 6.8 56 85-153 50-106 (296)
46 1kv9_A Type II quinohemoprotei 58.8 68 0.0023 25.6 13.3 120 15-152 59-195 (668)
47 1yiq_A Quinohemoprotein alcoho 58.0 71 0.0024 25.6 14.4 121 15-152 63-200 (689)
48 1kb0_A Quinohemoprotein alcoho 58.0 71 0.0024 25.6 12.9 122 15-153 70-208 (677)
49 4aez_A CDC20, WD repeat-contai 57.6 51 0.0018 23.8 8.3 58 85-153 284-343 (401)
50 3fm0_A Protein CIAO1; WDR39,SG 55.4 52 0.0018 23.3 8.3 73 60-153 27-99 (345)
51 3bws_A Protein LP49; two-domai 55.3 19 0.00066 26.2 4.9 58 85-152 101-159 (433)
52 3ott_A Two-component system se 54.5 83 0.0028 25.3 10.0 69 60-152 482-551 (758)
53 2dg1_A DRP35, lactonase; beta 54.5 52 0.0018 22.9 8.9 61 85-152 66-127 (333)
54 4gga_A P55CDC, cell division c 54.0 61 0.0021 23.6 8.5 58 85-151 125-183 (420)
55 3jro_A Fusion protein of prote 53.0 78 0.0027 25.5 8.3 62 85-155 31-95 (753)
56 1qhu_A Protein (hemopexin); be 51.5 79 0.0027 24.2 14.6 49 60-128 158-206 (460)
57 2hqs_A Protein TOLB; TOLB, PAL 51.5 69 0.0024 23.5 9.2 61 85-154 291-352 (415)
58 1yiq_A Quinohemoprotein alcoho 51.4 93 0.0032 25.0 11.7 99 55-176 65-172 (689)
59 1l0q_A Surface layer protein; 49.1 69 0.0024 22.8 8.1 58 85-154 54-113 (391)
60 2hqs_A Protein TOLB; TOLB, PAL 48.7 77 0.0026 23.2 9.2 61 85-153 247-307 (415)
61 1l0q_A Surface layer protein; 48.4 71 0.0024 22.7 8.8 58 85-154 96-155 (391)
62 4e54_B DNA damage-binding prot 47.9 79 0.0027 23.2 7.8 73 60-155 131-205 (435)
63 1nir_A Nitrite reductase; hemo 47.4 56 0.0019 25.2 6.5 63 85-154 346-415 (543)
64 1kv9_A Type II quinohemoprotei 47.2 1.1E+02 0.0037 24.5 11.3 99 54-176 60-167 (668)
65 2ghs_A AGR_C_1268P; regucalcin 46.1 75 0.0026 22.3 11.4 56 85-154 71-126 (326)
66 3jrp_A Fusion protein of prote 45.8 75 0.0026 22.2 8.6 62 85-155 33-97 (379)
67 1ck7_A Protein (gelatinase A); 45.4 1.2E+02 0.004 24.4 9.2 16 15-30 446-461 (631)
68 2xbg_A YCF48-like protein; pho 44.3 82 0.0028 22.3 16.6 146 2-178 67-222 (327)
69 4ery_A WD repeat-containing pr 43.7 76 0.0026 21.7 10.6 58 85-151 171-228 (312)
70 1kb0_A Quinohemoprotein alcoho 43.6 1.2E+02 0.0043 24.2 11.8 76 54-152 71-155 (677)
71 3hfq_A Uncharacterized protein 43.5 50 0.0017 23.1 5.4 62 86-154 19-80 (347)
72 1p22_A F-BOX/WD-repeat protein 41.4 1E+02 0.0035 22.5 8.7 55 85-151 276-330 (435)
73 1npe_A Nidogen, entactin; glyc 40.8 81 0.0028 21.2 9.2 57 85-153 189-245 (267)
74 1flg_A Protein (quinoprotein e 39.1 1.4E+02 0.0047 23.4 9.3 75 85-177 466-545 (582)
75 3azo_A Aminopeptidase; POP fam 38.7 1.4E+02 0.0047 23.3 10.9 64 85-154 265-333 (662)
76 4ggc_A P55CDC, cell division c 37.3 95 0.0033 21.0 8.5 59 85-152 45-104 (318)
77 2xbg_A YCF48-like protein; pho 36.9 1.1E+02 0.0038 21.6 17.1 148 2-178 26-180 (327)
78 3dwl_C Actin-related protein 2 36.2 32 0.0011 24.4 3.4 55 85-148 33-88 (377)
79 3oyo_A Hemopexin fold protein 36.1 1E+02 0.0034 20.9 11.1 61 60-145 127-197 (225)
80 1su3_A Interstitial collagenas 34.9 1.5E+02 0.0051 22.5 12.9 16 15-30 265-280 (450)
81 2ad6_A Methanol dehydrogenase 34.7 1.6E+02 0.0056 22.9 13.4 119 15-152 55-193 (571)
82 3ju4_A Endo-N-acetylneuraminid 34.4 1.6E+02 0.0054 22.6 12.4 122 45-178 278-404 (670)
83 2ovr_B FBW7, F-BOX/WD repeat p 33.6 1.4E+02 0.0047 21.8 13.0 54 85-150 179-232 (445)
84 2mad_H Methylamine dehydrogena 33.4 1.4E+02 0.0047 21.7 9.9 77 60-152 278-356 (373)
85 1jmx_B Amine dehydrogenase; ox 33.0 1.2E+02 0.0041 20.9 8.6 68 60-151 10-79 (349)
86 3ott_A Two-component system se 32.7 1.9E+02 0.0066 23.2 8.1 57 86-153 537-593 (758)
87 3bws_A Protein LP49; two-domai 32.6 1.4E+02 0.0047 21.5 11.2 71 60-151 133-205 (433)
88 2ojh_A Uncharacterized protein 32.3 1.1E+02 0.0037 20.2 8.0 61 86-154 154-214 (297)
89 3v7d_B Cell division control p 32.3 1.5E+02 0.005 21.7 11.0 53 85-149 332-384 (464)
90 2z3z_A Dipeptidyl aminopeptida 32.1 1.8E+02 0.0063 22.8 9.5 63 85-153 335-398 (706)
91 1q7f_A NHL, brain tumor CG1071 31.7 1.2E+02 0.004 20.4 11.4 70 60-153 88-158 (286)
92 2ad6_A Methanol dehydrogenase 31.4 1.9E+02 0.0063 22.6 9.3 75 85-177 444-523 (571)
93 4aez_A CDC20, WD repeat-contai 30.5 1.5E+02 0.0052 21.3 8.4 57 85-151 113-170 (401)
94 4gqb_B Methylosome protein 50; 30.0 1.5E+02 0.0051 21.0 6.7 56 85-150 149-205 (344)
95 4gga_A P55CDC, cell division c 29.7 1.6E+02 0.0055 21.3 11.9 54 85-148 301-355 (420)
96 1ri6_A Putative isomerase YBHE 29.6 1.4E+02 0.0047 20.5 6.8 18 138-155 302-319 (343)
97 2ojh_A Uncharacterized protein 29.2 1.3E+02 0.0043 19.9 8.1 61 84-154 109-170 (297)
98 2p9w_A MAL S 1 allergenic prot 29.0 1.7E+02 0.0057 21.3 10.8 87 85-179 206-303 (334)
99 4fmw_A RNA (guanine-9-)-methyl 28.9 28 0.00097 23.2 1.9 15 22-36 119-133 (197)
100 3c5m_A Oligogalacturonate lyas 27.8 1.6E+02 0.0055 20.7 6.6 66 85-154 216-281 (396)
101 1qks_A Cytochrome CD1 nitrite 27.8 1.8E+02 0.006 22.8 6.4 64 84-154 363-434 (567)
102 2ovr_B FBW7, F-BOX/WD repeat p 27.6 1.8E+02 0.0061 21.2 11.8 54 85-150 299-352 (445)
103 1q7f_A NHL, brain tumor CG1071 27.2 1.4E+02 0.0049 20.0 11.1 62 85-152 51-115 (286)
104 3k26_A Polycomb protein EED; W 26.9 1.6E+02 0.0054 20.3 9.3 57 85-152 95-153 (366)
105 3dqy_A Toluene 1,2-dioxygenase 26.2 98 0.0034 17.7 4.3 34 139-176 65-98 (106)
106 2lyd_A Decapping protein 1; DC 26.2 43 0.0015 20.8 2.2 21 135-155 36-56 (134)
107 1gxr_A ESG1, transducin-like e 26.2 1.6E+02 0.0053 20.0 9.1 57 85-152 163-220 (337)
108 1gxr_A ESG1, transducin-like e 25.5 1.6E+02 0.0055 20.0 9.6 56 85-151 246-301 (337)
109 3qhy_B Beta-lactamase inhibito 25.3 1.3E+02 0.0043 21.0 4.8 8 60-67 236-243 (282)
110 1qks_A Cytochrome CD1 nitrite 24.1 2.6E+02 0.0088 21.8 10.5 62 85-155 320-382 (567)
111 1w6s_A Methanol dehydrogenase 24.0 2.7E+02 0.0092 22.0 9.3 75 85-177 453-532 (599)
112 3gce_A Ferredoxin component of 23.6 1.2E+02 0.0042 17.9 4.3 36 138-177 75-110 (121)
113 3lrv_A PRE-mRNA-splicing facto 22.4 2E+02 0.0069 20.0 7.6 55 85-149 149-204 (343)
114 3ba0_A Macrophage metalloelast 22.3 2.3E+02 0.008 20.7 14.9 15 16-30 184-198 (365)
115 3kvp_A Uncharacterized protein 22.2 91 0.0031 16.8 2.6 16 85-100 40-55 (72)
116 1q67_A Decapping protein invol 22.2 80 0.0027 21.4 3.0 21 134-154 41-61 (231)
117 2w8x_A ION-channel modulator r 21.6 89 0.0031 15.9 2.5 21 135-155 27-47 (72)
118 3azo_A Aminopeptidase; POP fam 21.6 2.9E+02 0.0098 21.5 10.3 61 85-154 316-377 (662)
119 2hz6_A Endoplasmic reticulum t 21.3 1.3E+02 0.0046 21.6 4.5 52 85-150 19-74 (369)
120 1qhu_A Protein (hemopexin); be 21.1 2.8E+02 0.0096 21.2 13.4 48 119-179 158-205 (460)
121 3fvz_A Peptidyl-glycine alpha- 20.6 2.2E+02 0.0076 19.8 13.3 77 61-153 208-284 (329)
122 3zwl_B Eukaryotic translation 20.5 2.2E+02 0.0074 19.6 9.1 58 85-153 54-112 (369)
123 1vyh_C Platelet-activating fac 20.1 2.5E+02 0.0087 20.3 7.1 55 85-149 130-184 (410)
No 1
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=5.8e-34 Score=207.03 Aligned_cols=165 Identities=20% Similarity=0.310 Sum_probs=146.9
Q ss_pred CceEEeccCCCCCcCeeEEEeCCEEEEEccccCCCCCceeeecC---------CCCCCcceeeeEEEECCEEEEEcCCCC
Q psy8877 1 MHWTVHLTGGPRRVNHAAVLNDNKIFTFGGYCSGEDYVKRRPMD---------GEPPSYRDFHTANIIDGRMYIWGGRGD 71 (180)
Q Consensus 1 ~~W~~~~~~~~~r~~~~~~~~~~~iy~~GG~~~~~~~~~~~~~~---------~~~p~~r~~~~~~~~~~~lyv~GG~~~ 71 (180)
.+|..++++|.+|..|++++++++||++||.......++++.|| .++|.+|..|+++.++++||++||...
T Consensus 40 ~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~ 119 (302)
T 2xn4_A 40 ERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVLNGLLYAVGGFDG 119 (302)
T ss_dssp TEEEEECCCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEECS
T ss_pred CcEeEcccCCcccccceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEECCEEEEEcCCCC
Confidence 37999999999999999999999999999987666667788887 778999999999999999999999865
Q ss_pred CCCcccCCCceecCcEEEEECCCCeEEeecCCCCCCCCceeeEEEEECCEEEEEcCccCCccceeceeeEEEcCCCcEEE
Q psy8877 72 ESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWAR 151 (180)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~W~~ 151 (180)
....+++++||+.+++|++++ .+|.+|..|+++.++++||++||.........+++++||+.+++|+.
T Consensus 120 ---------~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~ 187 (302)
T 2xn4_A 120 ---------STGLSSVEAYNIKSNEWFHVA---PMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTY 187 (302)
T ss_dssp ---------SCEEEEEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEE
T ss_pred ---------CccCceEEEEeCCCCeEeecC---CCCCcccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEE
Confidence 345689999999999999986 48899999999999999999999976533567899999999999999
Q ss_pred eecCCCCCCCCcceeEEEECCEEEEEcCC
Q psy8877 152 VIPHGAPPTKRRRQSCIIKGDTLIMFGGS 180 (180)
Q Consensus 152 ~~~~~~~~~~r~~~~~~~~~~~i~~~GG~ 180 (180)
++. .|.+|..|+++.++++||++||.
T Consensus 188 ~~~---~p~~r~~~~~~~~~~~iyv~GG~ 213 (302)
T 2xn4_A 188 IAE---MSTRRSGAGVGVLNNLLYAVGGH 213 (302)
T ss_dssp ECC---CSSCCBSCEEEEETTEEEEECCB
T ss_pred CCC---CccccccccEEEECCEEEEECCC
Confidence 976 45889999999999999999984
No 2
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=7.9e-34 Score=207.52 Aligned_cols=164 Identities=20% Similarity=0.192 Sum_probs=145.4
Q ss_pred CceEEeccCCCCCcCeeEEEeCCEEEEEcccc---CCCCCceeeecC---------CCCCCcceeeeEEEECCEEEEEcC
Q psy8877 1 MHWTVHLTGGPRRVNHAAVLNDNKIFTFGGYC---SGEDYVKRRPMD---------GEPPSYRDFHTANIIDGRMYIWGG 68 (180)
Q Consensus 1 ~~W~~~~~~~~~r~~~~~~~~~~~iy~~GG~~---~~~~~~~~~~~~---------~~~p~~r~~~~~~~~~~~lyv~GG 68 (180)
.+|+.++++|.+|.+|++++++++||++||.. .....++++.|| +++|.+|..|+++.++++||++||
T Consensus 77 ~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG 156 (315)
T 4asc_A 77 SEWLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGG 156 (315)
T ss_dssp TEEEECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECC
T ss_pred CeEEECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeC
Confidence 47999999999999999999999999999965 245567778877 678999999999999999999999
Q ss_pred CCCCCCcccCCCceecCcEEEEECCCCeEEeecCCCCCCCCceeeEEEEECCEEEEEcCccCCccceeceeeEEEcCCCc
Q psy8877 69 RGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQE 148 (180)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~ 148 (180)
.... ....+++++||+.+++|++++ .+|.+|..|+++.++++|||+||.... ...+++++||+++++
T Consensus 157 ~~~~--------~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~--~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 157 KGSD--------RKCLNKMCVYDPKKFEWKELA---PMQTARSLFGATVHDGRIIVAAGVTDT--GLTSSAEVYSITDNK 223 (315)
T ss_dssp BCTT--------SCBCCCEEEEETTTTEEEECC---CCSSCCBSCEEEEETTEEEEEEEECSS--SEEEEEEEEETTTTE
T ss_pred CCCC--------CcccceEEEEeCCCCeEEECC---CCCCchhceEEEEECCEEEEEeccCCC--CccceEEEEECCCCe
Confidence 8441 356799999999999999986 489999999999999999999998764 467899999999999
Q ss_pred EEEeecCCCCCCCCcceeEEEECCEEEEEcCC
Q psy8877 149 WARVIPHGAPPTKRRRQSCIIKGDTLIMFGGS 180 (180)
Q Consensus 149 W~~~~~~~~~~~~r~~~~~~~~~~~i~~~GG~ 180 (180)
|+.++. .|.+|..|+++.++++||++||.
T Consensus 224 W~~~~~---~p~~r~~~~~~~~~~~l~v~GG~ 252 (315)
T 4asc_A 224 WAPFEA---FPQERSSLSLVSLVGTLYAIGGF 252 (315)
T ss_dssp EEEECC---CSSCCBSCEEEEETTEEEEEEEE
T ss_pred EEECCC---CCCcccceeEEEECCEEEEECCc
Confidence 999986 46889999999999999999983
No 3
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=1e-33 Score=207.14 Aligned_cols=164 Identities=16% Similarity=0.182 Sum_probs=145.0
Q ss_pred CceEEeccCCCCCcCeeEEEeCCEEEEEcccc--CCCCCceeeecC---------CCCCCcceeeeEEEECCEEEEEcCC
Q psy8877 1 MHWTVHLTGGPRRVNHAAVLNDNKIFTFGGYC--SGEDYVKRRPMD---------GEPPSYRDFHTANIIDGRMYIWGGR 69 (180)
Q Consensus 1 ~~W~~~~~~~~~r~~~~~~~~~~~iy~~GG~~--~~~~~~~~~~~~---------~~~p~~r~~~~~~~~~~~lyv~GG~ 69 (180)
.+|+.++++|.+|..|++++++++||++||.. .....++++.|| +++|.+|..|+++.++++||++||.
T Consensus 88 ~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~ 167 (318)
T 2woz_A 88 SEWVGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGK 167 (318)
T ss_dssp TEEEECSCBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCE
T ss_pred CcEEECCCCCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCC
Confidence 47999999999999999999999999999976 344557788887 6789999999999999999999997
Q ss_pred CCCCCcccCCCceecCcEEEEECCCCeEEeecCCCCCCCCceeeEEEEECCEEEEEcCccCCccceeceeeEEEcCCCcE
Q psy8877 70 GDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEW 149 (180)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~W 149 (180)
... ....+++++||+.+++|++++ .+|.+|..|+++.++++|||+||.... ...+++++||+++++|
T Consensus 168 ~~~--------~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~--~~~~~~~~yd~~~~~W 234 (318)
T 2woz_A 168 TDD--------KKCTNRVFIYNPKKGDWKDLA---PMKTPRSMFGVAIHKGKIVIAGGVTED--GLSASVEAFDLKTNKW 234 (318)
T ss_dssp ESS--------SCBCCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTEEEEEEEEETT--EEEEEEEEEETTTCCE
T ss_pred CCC--------CCccceEEEEcCCCCEEEECC---CCCCCcccceEEEECCEEEEEcCcCCC--CccceEEEEECCCCeE
Confidence 541 355789999999999999996 488999999999999999999998764 4678999999999999
Q ss_pred EEeecCCCCCCCCcceeEEEECCEEEEEcCC
Q psy8877 150 ARVIPHGAPPTKRRRQSCIIKGDTLIMFGGS 180 (180)
Q Consensus 150 ~~~~~~~~~~~~r~~~~~~~~~~~i~~~GG~ 180 (180)
++++. .|.+|..|+++.++++||++||.
T Consensus 235 ~~~~~---~p~~r~~~~~~~~~~~i~v~GG~ 262 (318)
T 2woz_A 235 EVMTE---FPQERSSISLVSLAGSLYAIGGF 262 (318)
T ss_dssp EECCC---CSSCCBSCEEEEETTEEEEECCB
T ss_pred EECCC---CCCcccceEEEEECCEEEEECCe
Confidence 99976 45789999999999999999994
No 4
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=2.3e-33 Score=204.53 Aligned_cols=163 Identities=17% Similarity=0.244 Sum_probs=145.0
Q ss_pred CceEEeccCCCCCcCeeEEEeCCEEEEEccccCCCCCceeeecC---------CCCCCcceeeeEEEECCEEEEEcCCCC
Q psy8877 1 MHWTVHLTGGPRRVNHAAVLNDNKIFTFGGYCSGEDYVKRRPMD---------GEPPSYRDFHTANIIDGRMYIWGGRGD 71 (180)
Q Consensus 1 ~~W~~~~~~~~~r~~~~~~~~~~~iy~~GG~~~~~~~~~~~~~~---------~~~p~~r~~~~~~~~~~~lyv~GG~~~ 71 (180)
.+|+.++++|.+|..|++++++++||++||.......++++.|| .++|.+|..|+++.++++||++||...
T Consensus 100 ~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~ 179 (308)
T 1zgk_A 100 NQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDG 179 (308)
T ss_dssp TEEEECCCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCS
T ss_pred CeEeECCCCCcCccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEECCEEEEEeCCCC
Confidence 47999999999999999999999999999987665567777777 678999999999999999999999876
Q ss_pred CCCcccCCCceecCcEEEEECCCCeEEeecCCCCCCCCceeeEEEEECCEEEEEcCccCCccceeceeeEEEcCCCcEEE
Q psy8877 72 ESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWAR 151 (180)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~W~~ 151 (180)
. ...+++++||+.+++|+.++ .+|.+|..|+++.++++|||+||.... ...+++++||+++++|++
T Consensus 180 ~---------~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~--~~~~~v~~yd~~~~~W~~ 245 (308)
T 1zgk_A 180 T---------NRLNSAECYYPERNEWRMIT---AMNTIRSGAGVCVLHNCIYAAGGYDGQ--DQLNSVERYDVETETWTF 245 (308)
T ss_dssp S---------CBCCCEEEEETTTTEEEECC---CCSSCCBSCEEEEETTEEEEECCBCSS--SBCCCEEEEETTTTEEEE
T ss_pred C---------CcCceEEEEeCCCCeEeeCC---CCCCccccceEEEECCEEEEEeCCCCC--CccceEEEEeCCCCcEEE
Confidence 2 33789999999999999986 488999999999999999999998764 457899999999999999
Q ss_pred eecCCCCCCCCcceeEEEECCEEEEEcCC
Q psy8877 152 VIPHGAPPTKRRRQSCIIKGDTLIMFGGS 180 (180)
Q Consensus 152 ~~~~~~~~~~r~~~~~~~~~~~i~~~GG~ 180 (180)
++. .|.+|..++++.++++||++||.
T Consensus 246 ~~~---~p~~r~~~~~~~~~~~i~v~GG~ 271 (308)
T 1zgk_A 246 VAP---MKHRRSALGITVHQGRIYVLGGY 271 (308)
T ss_dssp CCC---CSSCCBSCEEEEETTEEEEECCB
T ss_pred CCC---CCCCccceEEEEECCEEEEEcCc
Confidence 986 45889999999999999999993
No 5
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=2.8e-33 Score=203.77 Aligned_cols=165 Identities=22% Similarity=0.287 Sum_probs=145.2
Q ss_pred CceEEeccCCCCCcCeeEEEeCCEEEEEccccCCCCCceeeecC---------CCCCCcceeeeEEEECCEEEEEcCCCC
Q psy8877 1 MHWTVHLTGGPRRVNHAAVLNDNKIFTFGGYCSGEDYVKRRPMD---------GEPPSYRDFHTANIIDGRMYIWGGRGD 71 (180)
Q Consensus 1 ~~W~~~~~~~~~r~~~~~~~~~~~iy~~GG~~~~~~~~~~~~~~---------~~~p~~r~~~~~~~~~~~lyv~GG~~~ 71 (180)
.+|+.++++|.+|.+|++++++++||++||.. ....++++.|| +++|.+|..|+++.++++||++||...
T Consensus 34 ~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~-~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~ 112 (306)
T 3ii7_A 34 YSWTDIRCPFEKRRDAACVFWDNVVYILGGSQ-LFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAAEGKIYTSGGSEV 112 (306)
T ss_dssp TEEEECCCCSCCCBSCEEEEETTEEEEECCBS-SSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEETTEEEEECCBBT
T ss_pred CCEecCCCCCcccceeEEEEECCEEEEEeCCC-CCCcceEEEEeCCCCeEEECCCCCccccceeEEEECCEEEEECCCCC
Confidence 47999999999999999999999999999987 55667788887 678999999999999999999999863
Q ss_pred CCCcccCCCceecCcEEEEECCCCeEEeecCCCCCCCCceeeEEEEECCEEEEEcCccCCcc--ceeceeeEEEcCCCcE
Q psy8877 72 ESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVE--EHYNDIYRYCTRRQEW 149 (180)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~--~~~~~~~~~d~~~~~W 149 (180)
. ....+++++||+.+++|+++. .+|.+|..|+++.++++||++||...... ...+++++||+.+++|
T Consensus 113 ~--------~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W 181 (306)
T 3ii7_A 113 G--------NSALYLFECYDTRTESWHTKP---SMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETW 181 (306)
T ss_dssp T--------BSCCCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEE
T ss_pred C--------CcEeeeEEEEeCCCCceEeCC---CCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeE
Confidence 1 356789999999999999985 48999999999999999999999876421 2378999999999999
Q ss_pred EEeecCCCCCCCCcceeEEEECCEEEEEcCC
Q psy8877 150 ARVIPHGAPPTKRRRQSCIIKGDTLIMFGGS 180 (180)
Q Consensus 150 ~~~~~~~~~~~~r~~~~~~~~~~~i~~~GG~ 180 (180)
+.++. .|.+|..|+++.++++||++||.
T Consensus 182 ~~~~~---~p~~r~~~~~~~~~~~i~v~GG~ 209 (306)
T 3ii7_A 182 TELCP---MIEARKNHGLVFVKDKIFAVGGQ 209 (306)
T ss_dssp EEECC---CSSCCBSCEEEEETTEEEEECCE
T ss_pred EECCC---ccchhhcceEEEECCEEEEEeCC
Confidence 99986 45889999999999999999983
No 6
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=2.4e-33 Score=204.09 Aligned_cols=167 Identities=23% Similarity=0.305 Sum_probs=145.8
Q ss_pred CceEEeccCCCCCcCeeEEEeCCEEEEEcccc-CCCCCceeeecC---------CCCCCcceeeeEEEECCEEEEEcCCC
Q psy8877 1 MHWTVHLTGGPRRVNHAAVLNDNKIFTFGGYC-SGEDYVKRRPMD---------GEPPSYRDFHTANIIDGRMYIWGGRG 70 (180)
Q Consensus 1 ~~W~~~~~~~~~r~~~~~~~~~~~iy~~GG~~-~~~~~~~~~~~~---------~~~p~~r~~~~~~~~~~~lyv~GG~~ 70 (180)
.+|+.++++|.+|..|++++++++||++||.. .....++++.|| +++|.+|..|+++.++++||++||..
T Consensus 80 ~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~ 159 (306)
T 3ii7_A 80 DSWYSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSL 159 (306)
T ss_dssp TEEEEEECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEE
T ss_pred CeEEECCCCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCC
Confidence 37999999999999999999999999999987 455567778777 77899999999999999999999986
Q ss_pred CCCCcccCCCceecCcEEEEECCCCeEEeecCCCCCCCCceeeEEEEECCEEEEEcCccCCccceeceeeEEEcCCCcEE
Q psy8877 71 DESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWA 150 (180)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~W~ 150 (180)
.... .....+++++||+++++|+.++ .+|.+|..|+++.++++||++||.... ...+++++||+.+++|+
T Consensus 160 ~~~~-----~~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~i~v~GG~~~~--~~~~~~~~yd~~~~~W~ 229 (306)
T 3ii7_A 160 GNNV-----SGRVLNSCEVYDPATETWTELC---PMIEARKNHGLVFVKDKIFAVGGQNGL--GGLDNVEYYDIKLNEWK 229 (306)
T ss_dssp SCTT-----TCEECCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTEEEEECCEETT--EEBCCEEEEETTTTEEE
T ss_pred CCCC-----cccccceEEEeCCCCCeEEECC---CccchhhcceEEEECCEEEEEeCCCCC--CCCceEEEeeCCCCcEE
Confidence 5211 1134799999999999999996 488999999999999999999998764 56789999999999999
Q ss_pred EeecCCCCCCCCcceeEEEECCEEEEEcCC
Q psy8877 151 RVIPHGAPPTKRRRQSCIIKGDTLIMFGGS 180 (180)
Q Consensus 151 ~~~~~~~~~~~r~~~~~~~~~~~i~~~GG~ 180 (180)
.++. .|.+|..++++.++++||++||.
T Consensus 230 ~~~~---~p~~r~~~~~~~~~~~i~v~GG~ 256 (306)
T 3ii7_A 230 MVSP---MPWKGVTVKCAAVGSIVYVLAGF 256 (306)
T ss_dssp ECCC---CSCCBSCCEEEEETTEEEEEECB
T ss_pred ECCC---CCCCccceeEEEECCEEEEEeCc
Confidence 9976 45789999999999999999993
No 7
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=4.1e-33 Score=202.52 Aligned_cols=165 Identities=18% Similarity=0.265 Sum_probs=146.1
Q ss_pred CceEEeccCCCCCcCeeEEEeCCEEEEEccccCCCCCceeeecC---------CCCCCcceeeeEEEECCEEEEEcCCCC
Q psy8877 1 MHWTVHLTGGPRRVNHAAVLNDNKIFTFGGYCSGEDYVKRRPMD---------GEPPSYRDFHTANIIDGRMYIWGGRGD 71 (180)
Q Consensus 1 ~~W~~~~~~~~~r~~~~~~~~~~~iy~~GG~~~~~~~~~~~~~~---------~~~p~~r~~~~~~~~~~~lyv~GG~~~ 71 (180)
.+|+.++++|.+|..|++++++++||++||.......++++.|| +++|.+|..|+++.++++||++||...
T Consensus 87 ~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~ 166 (302)
T 2xn4_A 87 DQWTSVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDV 166 (302)
T ss_dssp TEEEEECCCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEET
T ss_pred CceeeCCCCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCC
Confidence 47999999999999999999999999999987766667788887 778999999999999999999999865
Q ss_pred CCCcccCCCceecCcEEEEECCCCeEEeecCCCCCCCCceeeEEEEECCEEEEEcCccCCccceeceeeEEEcCCCcEEE
Q psy8877 72 ESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWAR 151 (180)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~W~~ 151 (180)
.. ....+++++||+.+++|+.+. .+|.+|..|+++.++++||++||.... ...+++++||+++++|+.
T Consensus 167 ~~-------~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~--~~~~~~~~yd~~~~~W~~ 234 (302)
T 2xn4_A 167 AS-------RQCLSTVECYNATTNEWTYIA---EMSTRRSGAGVGVLNNLLYAVGGHDGP--LVRKSVEVYDPTTNAWRQ 234 (302)
T ss_dssp TT-------TEECCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTEEEEECCBSSS--SBCCCEEEEETTTTEEEE
T ss_pred CC-------CccccEEEEEeCCCCcEEECC---CCccccccccEEEECCEEEEECCCCCC--cccceEEEEeCCCCCEee
Confidence 21 245789999999999999996 488999999999999999999998764 457899999999999999
Q ss_pred eecCCCCCCCCcceeEEEECCEEEEEcCC
Q psy8877 152 VIPHGAPPTKRRRQSCIIKGDTLIMFGGS 180 (180)
Q Consensus 152 ~~~~~~~~~~r~~~~~~~~~~~i~~~GG~ 180 (180)
++.+ |.+|..++++.++++||++||.
T Consensus 235 ~~~~---~~~r~~~~~~~~~~~i~v~GG~ 260 (302)
T 2xn4_A 235 VADM---NMCRRNAGVCAVNGLLYVVGGD 260 (302)
T ss_dssp ECCC---SSCCBSCEEEEETTEEEEECCB
T ss_pred CCCC---CCccccCeEEEECCEEEEECCc
Confidence 9864 5789999999999999999983
No 8
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=2.4e-33 Score=204.42 Aligned_cols=163 Identities=18% Similarity=0.248 Sum_probs=143.9
Q ss_pred CceEEeccCCCCCcCeeEEEeCCEEEEEccc----cCCCCCceeeecC---------CCCCCcceeeeEEEECCEEEEEc
Q psy8877 1 MHWTVHLTGGPRRVNHAAVLNDNKIFTFGGY----CSGEDYVKRRPMD---------GEPPSYRDFHTANIIDGRMYIWG 67 (180)
Q Consensus 1 ~~W~~~~~~~~~r~~~~~~~~~~~iy~~GG~----~~~~~~~~~~~~~---------~~~p~~r~~~~~~~~~~~lyv~G 67 (180)
.+|+.++++|.+|.+|++++++++||++||. ......++++.|| .++|.+|..|+++.++++||++|
T Consensus 49 ~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~G 128 (308)
T 1zgk_A 49 GTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVG 128 (308)
T ss_dssp TEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEETTEEEEEC
T ss_pred CeEeECCCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEECCEEEEEc
Confidence 4799999999999999999999999999997 3444456677777 67899999999999999999999
Q ss_pred CCCCCCCcccCCCceecCcEEEEECCCCeEEeecCCCCCCCCceeeEEEEECCEEEEEcCccCCccceeceeeEEEcCCC
Q psy8877 68 GRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQ 147 (180)
Q Consensus 68 G~~~~~~~~~~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~d~~~~ 147 (180)
|... ....+++++||+.+++|++++ .+|.+|..|+++.++++||++||.... ...+++++||+.++
T Consensus 129 G~~~---------~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~--~~~~~~~~yd~~~~ 194 (308)
T 1zgk_A 129 GSHG---------CIHHNSVERYEPERDEWHLVA---PMLTRRIGVGVAVLNRLLYAVGGFDGT--NRLNSAECYYPERN 194 (308)
T ss_dssp CEET---------TEECCCEEEEETTTTEEEECC---CCSSCCBSCEEEEETTEEEEECCBCSS--CBCCCEEEEETTTT
T ss_pred CCCC---------CcccccEEEECCCCCeEeECC---CCCccccceEEEEECCEEEEEeCCCCC--CcCceEEEEeCCCC
Confidence 9865 356789999999999999986 488999999999999999999998765 34789999999999
Q ss_pred cEEEeecCCCCCCCCcceeEEEECCEEEEEcCC
Q psy8877 148 EWARVIPHGAPPTKRRRQSCIIKGDTLIMFGGS 180 (180)
Q Consensus 148 ~W~~~~~~~~~~~~r~~~~~~~~~~~i~~~GG~ 180 (180)
+|+.++. .|.+|..|+++.++++||++||.
T Consensus 195 ~W~~~~~---~p~~r~~~~~~~~~~~iyv~GG~ 224 (308)
T 1zgk_A 195 EWRMITA---MNTIRSGAGVCVLHNCIYAAGGY 224 (308)
T ss_dssp EEEECCC---CSSCCBSCEEEEETTEEEEECCB
T ss_pred eEeeCCC---CCCccccceEEEECCEEEEEeCC
Confidence 9999976 45789999999999999999984
No 9
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=7.2e-33 Score=201.12 Aligned_cols=162 Identities=19% Similarity=0.304 Sum_probs=145.0
Q ss_pred ceEEeccCCCCCcCeeEEEeCCEEEEEccccCCCCCceeeecC---------CCCCCcceeeeEEEECCEEEEEcCCCCC
Q psy8877 2 HWTVHLTGGPRRVNHAAVLNDNKIFTFGGYCSGEDYVKRRPMD---------GEPPSYRDFHTANIIDGRMYIWGGRGDE 72 (180)
Q Consensus 2 ~W~~~~~~~~~r~~~~~~~~~~~iy~~GG~~~~~~~~~~~~~~---------~~~p~~r~~~~~~~~~~~lyv~GG~~~~ 72 (180)
+|+.++++|.+|..|++++++++||++||.......++++.|| +++|.+|..|+++.++++||++||...
T Consensus 92 ~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~- 170 (301)
T 2vpj_A 92 VWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDG- 170 (301)
T ss_dssp CCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECCBCS-
T ss_pred eeEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECCCCC-
Confidence 3999999999999999999999999999987766677888887 567899999999999999999999866
Q ss_pred CCcccCCCceecCcEEEEECCCCeEEeecCCCCCCCCceeeEEEEECCEEEEEcCccCCccceeceeeEEEcCCCcEEEe
Q psy8877 73 SSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARV 152 (180)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~W~~~ 152 (180)
....+++++||+.+++|+.+. .+|.+|..|+++.++++||++||.... ...+++++||+++++|+++
T Consensus 171 --------~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~i~v~GG~~~~--~~~~~v~~yd~~~~~W~~~ 237 (301)
T 2vpj_A 171 --------LNILNSVEKYDPHTGHWTNVT---PMATKRSGAGVALLNDHIYVVGGFDGT--AHLSSVEAYNIRTDSWTTV 237 (301)
T ss_dssp --------SCBCCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTEEEEECCBCSS--SBCCCEEEEETTTTEEEEE
T ss_pred --------CcccceEEEEeCCCCcEEeCC---CCCcccccceEEEECCEEEEEeCCCCC--cccceEEEEeCCCCcEEEC
Confidence 246789999999999999995 489999999999999999999998764 3578999999999999999
Q ss_pred ecCCCCCCCCcceeEEEECCEEEEEcCC
Q psy8877 153 IPHGAPPTKRRRQSCIIKGDTLIMFGGS 180 (180)
Q Consensus 153 ~~~~~~~~~r~~~~~~~~~~~i~~~GG~ 180 (180)
+. .|.+|..|+++.++++||++||.
T Consensus 238 ~~---~p~~r~~~~~~~~~~~i~v~GG~ 262 (301)
T 2vpj_A 238 TS---MTTPRCYVGATVLRGRLYAIAGY 262 (301)
T ss_dssp CC---CSSCCBSCEEEEETTEEEEECCB
T ss_pred CC---CCCcccceeEEEECCEEEEEcCc
Confidence 76 45889999999999999999984
No 10
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=1.3e-32 Score=199.81 Aligned_cols=163 Identities=21% Similarity=0.370 Sum_probs=143.9
Q ss_pred CceEEeccCCCCCcCeeEEEeCCEEEEEccccCCCCCceeeecC------------CCCCCcceeeeEEEECCEEEEEcC
Q psy8877 1 MHWTVHLTGGPRRVNHAAVLNDNKIFTFGGYCSGEDYVKRRPMD------------GEPPSYRDFHTANIIDGRMYIWGG 68 (180)
Q Consensus 1 ~~W~~~~~~~~~r~~~~~~~~~~~iy~~GG~~~~~~~~~~~~~~------------~~~p~~r~~~~~~~~~~~lyv~GG 68 (180)
.+|+.++++|.+|.+|++++++++||++||.......++++.|| +++|.+|..|+++.++++||++||
T Consensus 41 ~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG 120 (301)
T 2vpj_A 41 QEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGG 120 (301)
T ss_dssp TEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEETTEEEEECC
T ss_pred CeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEECCEEEEEcc
Confidence 47999999999999999999999999999987665666666666 467899999999999999999999
Q ss_pred CCCCCCcccCCCceecCcEEEEECCCCeEEeecCCCCCCCCceeeEEEEECCEEEEEcCccCCccceeceeeEEEcCCCc
Q psy8877 69 RGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQE 148 (180)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~ 148 (180)
... ....+++++||+.+++|++++. +|.+|..|+++.++++||++||.... ...+++++||+.+++
T Consensus 121 ~~~---------~~~~~~~~~~d~~~~~W~~~~~---~p~~r~~~~~~~~~~~iyv~GG~~~~--~~~~~~~~~d~~~~~ 186 (301)
T 2vpj_A 121 FDG---------SRRHTSMERYDPNIDQWSMLGD---MQTAREGAGLVVASGVIYCLGGYDGL--NILNSVEKYDPHTGH 186 (301)
T ss_dssp BCS---------SCBCCEEEEEETTTTEEEEEEE---CSSCCBSCEEEEETTEEEEECCBCSS--CBCCCEEEEETTTTE
T ss_pred cCC---------CcccceEEEEcCCCCeEEECCC---CCCCcccceEEEECCEEEEECCCCCC--cccceEEEEeCCCCc
Confidence 876 2446899999999999999864 88999999999999999999998764 467899999999999
Q ss_pred EEEeecCCCCCCCCcceeEEEECCEEEEEcCC
Q psy8877 149 WARVIPHGAPPTKRRRQSCIIKGDTLIMFGGS 180 (180)
Q Consensus 149 W~~~~~~~~~~~~r~~~~~~~~~~~i~~~GG~ 180 (180)
|+.++. .|.+|..|+++.++++||++||.
T Consensus 187 W~~~~~---~p~~r~~~~~~~~~~~i~v~GG~ 215 (301)
T 2vpj_A 187 WTNVTP---MATKRSGAGVALLNDHIYVVGGF 215 (301)
T ss_dssp EEEECC---CSSCCBSCEEEEETTEEEEECCB
T ss_pred EEeCCC---CCcccccceEEEECCEEEEEeCC
Confidence 999976 46889999999999999999984
No 11
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=7.2e-32 Score=197.14 Aligned_cols=166 Identities=19% Similarity=0.278 Sum_probs=138.7
Q ss_pred CceEEeccC--CCCCcCeeEEEeCCEEEEEcccc----C--CCCCceeeecC---------CCCCCcceeeeEEEECCEE
Q psy8877 1 MHWTVHLTG--GPRRVNHAAVLNDNKIFTFGGYC----S--GEDYVKRRPMD---------GEPPSYRDFHTANIIDGRM 63 (180)
Q Consensus 1 ~~W~~~~~~--~~~r~~~~~~~~~~~iy~~GG~~----~--~~~~~~~~~~~---------~~~p~~r~~~~~~~~~~~l 63 (180)
.+|+. +++ |.+|.+|++++++++||++||.. . ....++++.|| +++|.+|..|+++.++++|
T Consensus 23 ~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l 101 (315)
T 4asc_A 23 NECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEALNSI 101 (315)
T ss_dssp TEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEEEETTEE
T ss_pred CeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEEEECCEE
Confidence 36886 555 45899999999999999999962 1 12234466776 6789999999999999999
Q ss_pred EEEcCCCCCCCcccCCCceecCcEEEEECCCCeEEeecCCCCCCCCceeeEEEEECCEEEEEcCccCCccceeceeeEEE
Q psy8877 64 YIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYC 143 (180)
Q Consensus 64 yv~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~d 143 (180)
|++||..... .....+++++||+.+++|++++ .+|.+|..|+++.++++||++||.... ....+++++||
T Consensus 102 yv~GG~~~~~------~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~~yd 171 (315)
T 4asc_A 102 YVVGGREIKD------GERCLDSVMCYDRLSFKWGESD---PLPYVVYGHTVLSHMDLVYVIGGKGSD-RKCLNKMCVYD 171 (315)
T ss_dssp EEECCEESST------TCCBCCCEEEEETTTTEEEECC---CCSSCCBSCEEEEETTEEEEECCBCTT-SCBCCCEEEEE
T ss_pred EEEeCCcCCC------CCcccceEEEECCCCCcEeECC---CCCCcccceeEEEECCEEEEEeCCCCC-CcccceEEEEe
Confidence 9999975311 1356799999999999999986 489999999999999999999998544 36788999999
Q ss_pred cCCCcEEEeecCCCCCCCCcceeEEEECCEEEEEcCC
Q psy8877 144 TRRQEWARVIPHGAPPTKRRRQSCIIKGDTLIMFGGS 180 (180)
Q Consensus 144 ~~~~~W~~~~~~~~~~~~r~~~~~~~~~~~i~~~GG~ 180 (180)
+.+++|++++++ |.+|..|+++.++++||++||.
T Consensus 172 ~~~~~W~~~~~~---p~~r~~~~~~~~~~~iyv~GG~ 205 (315)
T 4asc_A 172 PKKFEWKELAPM---QTARSLFGATVHDGRIIVAAGV 205 (315)
T ss_dssp TTTTEEEECCCC---SSCCBSCEEEEETTEEEEEEEE
T ss_pred CCCCeEEECCCC---CCchhceEEEEECCEEEEEecc
Confidence 999999999864 5889999999999999999983
No 12
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.98 E-value=3.3e-31 Score=193.85 Aligned_cols=166 Identities=17% Similarity=0.310 Sum_probs=137.9
Q ss_pred CceEEec-cCCCCCcCeeEEEeCCEEEEEccccCC------CCCceeeecC---------CCCCCcceeeeEEEECCEEE
Q psy8877 1 MHWTVHL-TGGPRRVNHAAVLNDNKIFTFGGYCSG------EDYVKRRPMD---------GEPPSYRDFHTANIIDGRMY 64 (180)
Q Consensus 1 ~~W~~~~-~~~~~r~~~~~~~~~~~iy~~GG~~~~------~~~~~~~~~~---------~~~p~~r~~~~~~~~~~~ly 64 (180)
.+|...+ +.+.+|.+|++++.+++||++||.... ...++++.|| +++|.+|..|+++.++++||
T Consensus 34 ~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iy 113 (318)
T 2woz_A 34 NECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEVDDKIY 113 (318)
T ss_dssp TEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEETTEEE
T ss_pred CceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEECCEEE
Confidence 3688742 234699999999999999999995321 1223466776 77899999999999999999
Q ss_pred EEcCCCCCCCcccCCCceecCcEEEEECCCCeEEeecCCCCCCCCceeeEEEEECCEEEEEcCccCCccceeceeeEEEc
Q psy8877 65 IWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCT 144 (180)
Q Consensus 65 v~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~d~ 144 (180)
++||.... .....+++++||+.+++|+++. .+|.+|..|+++.++++||++||.... ....+++++||+
T Consensus 114 v~GG~~~~-------~~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~~yd~ 182 (318)
T 2woz_A 114 VVAGKDLQ-------TEASLDSVLCYDPVAAKWSEVK---NLPIKVYGHNVISHNGMIYCLGGKTDD-KKCTNRVFIYNP 182 (318)
T ss_dssp EEEEEBTT-------TCCEEEEEEEEETTTTEEEEEC---CCSSCEESCEEEEETTEEEEECCEESS-SCBCCCEEEEET
T ss_pred EEcCccCC-------CCcccceEEEEeCCCCCEeECC---CCCCcccccEEEEECCEEEEEcCCCCC-CCccceEEEEcC
Confidence 99998631 1356789999999999999986 489999999999999999999998654 356789999999
Q ss_pred CCCcEEEeecCCCCCCCCcceeEEEECCEEEEEcCC
Q psy8877 145 RRQEWARVIPHGAPPTKRRRQSCIIKGDTLIMFGGS 180 (180)
Q Consensus 145 ~~~~W~~~~~~~~~~~~r~~~~~~~~~~~i~~~GG~ 180 (180)
.+++|++++. .|.+|..|++++++++||++||.
T Consensus 183 ~~~~W~~~~~---~p~~r~~~~~~~~~~~iyv~GG~ 215 (318)
T 2woz_A 183 KKGDWKDLAP---MKTPRSMFGVAIHKGKIVIAGGV 215 (318)
T ss_dssp TTTEEEEECC---CSSCCBSCEEEEETTEEEEEEEE
T ss_pred CCCEEEECCC---CCCCcccceEEEECCEEEEEcCc
Confidence 9999999986 45889999999999999999983
No 13
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.97 E-value=8.1e-31 Score=194.49 Aligned_cols=174 Identities=17% Similarity=0.250 Sum_probs=134.9
Q ss_pred CceEEeccCC-CCCcCeeEEEeCCEEEEEccc-c----CCCCCceeeecC---------CCC-CCcceeeeEEEECCEEE
Q psy8877 1 MHWTVHLTGG-PRRVNHAAVLNDNKIFTFGGY-C----SGEDYVKRRPMD---------GEP-PSYRDFHTANIIDGRMY 64 (180)
Q Consensus 1 ~~W~~~~~~~-~~r~~~~~~~~~~~iy~~GG~-~----~~~~~~~~~~~~---------~~~-p~~r~~~~~~~~~~~ly 64 (180)
.+|+.++++| .+|.+|++++++++||++||. . .....++++.|| ..+ |.+|..|+++..+++||
T Consensus 43 ~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iy 122 (357)
T 2uvk_A 43 KKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAY 122 (357)
T ss_dssp CCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEE
T ss_pred CCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEE
Confidence 3799999999 899999999999999999997 3 123356777777 334 49999999999999999
Q ss_pred EEcCCCCCCCc-------------------------ccCCCceecCcEEEEECCCCeEEeecCCCCCCCCcee-eEEEEE
Q psy8877 65 IWGGRGDESSL-------------------------YHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRS-HSAFVY 118 (180)
Q Consensus 65 v~GG~~~~~~~-------------------------~~~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~r~~-~~~~~~ 118 (180)
++||....... .........+++++||+.+++|+.+.. +|.+|.. |+++.+
T Consensus 123 v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~---~p~~~~~~~~~~~~ 199 (357)
T 2uvk_A 123 VTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGE---SPWYGTAGAAVVNK 199 (357)
T ss_dssp EEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEE---CSSCCCBSCEEEEE
T ss_pred EEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCC---CCCCCcccccEEEE
Confidence 99998641000 000000245899999999999999853 7766554 899999
Q ss_pred CCEEEEEcCccCCccceeceeeEEEc--CCCcEEEeecCCCCCCCCcceeEEEECCEEEEEcC
Q psy8877 119 GDGLYIFGGYNGLVEEHYNDIYRYCT--RRQEWARVIPHGAPPTKRRRQSCIIKGDTLIMFGG 179 (180)
Q Consensus 119 ~~~i~v~GG~~~~~~~~~~~~~~~d~--~~~~W~~~~~~~~~~~~r~~~~~~~~~~~i~~~GG 179 (180)
+++|||+||.... .....+++.||+ ++++|+.++.+. .|..|..|+++.++++||++||
T Consensus 200 ~~~iyv~GG~~~~-~~~~~~v~~~d~d~~~~~W~~~~~~~-~~~~~~~~~~~~~~~~iyv~GG 260 (357)
T 2uvk_A 200 GDKTWLINGEAKP-GLRTDAVFELDFTGNNLKWNKLAPVS-SPDGVAGGFAGISNDSLIFAGG 260 (357)
T ss_dssp TTEEEEECCEEET-TEECCCEEEEECC---CEEEECCCSS-TTTCCBSCEEEEETTEEEEECC
T ss_pred CCEEEEEeeecCC-CcccCceEEEEecCCCCcEEecCCCC-CCcccccceEEEECCEEEEEcC
Confidence 9999999998754 346778999986 999999998763 4556778889999999999999
No 14
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.97 E-value=5.4e-30 Score=190.04 Aligned_cols=161 Identities=21% Similarity=0.339 Sum_probs=130.2
Q ss_pred EeccCCCCCcCeeEEEeCCEEEEEccccCCCCCceeeecC-----------CCCC-CcceeeeEEEECCEEEEEcCCCCC
Q psy8877 5 VHLTGGPRRVNHAAVLNDNKIFTFGGYCSGEDYVKRRPMD-----------GEPP-SYRDFHTANIIDGRMYIWGGRGDE 72 (180)
Q Consensus 5 ~~~~~~~~r~~~~~~~~~~~iy~~GG~~~~~~~~~~~~~~-----------~~~p-~~r~~~~~~~~~~~lyv~GG~~~~ 72 (180)
.++++|.+|.+|++++++++||++||...+ +++.|| +++| .+|..|++++++++|||+||....
T Consensus 2 ~l~~lP~~r~~~~~~~~~~~iyv~GG~~~~----~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~ 77 (357)
T 2uvk_A 2 VLPETPVPFKSGTGAIDNDTVYIGLGSAGT----AWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKN 77 (357)
T ss_dssp CSCCCSSCCCSCEEEEETTEEEEECGGGTT----CEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEEC
T ss_pred CCCCCCccccceEEEEECCEEEEEeCcCCC----eEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCC
Confidence 468899999999999999999999997643 344443 5577 899999999999999999998210
Q ss_pred CCcccCCCceecCcEEEEECCCCeEEeecCCCCC-CCCceeeEEEEECCEEEEEcCccCCc-------------------
Q psy8877 73 SSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSV-PVGRRSHSAFVYGDGLYIFGGYNGLV------------------- 132 (180)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~d~~~~~w~~~~~~~~~-~~~r~~~~~~~~~~~i~v~GG~~~~~------------------- 132 (180)
........+++++||+.+++|++++. + |.+|..|+++..+++|||+||.....
T Consensus 78 ----~~~~~~~~~~v~~yd~~~~~W~~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~ 150 (357)
T 2uvk_A 78 ----SEGLTQVFNDVHKYNPKTNSWVKLMS---HAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAID 150 (357)
T ss_dssp ----TTSCEEECCCEEEEETTTTEEEECSC---CCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHH
T ss_pred ----CCccceeeccEEEEeCCCCcEEECCC---CCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchh
Confidence 00124678999999999999999975 4 48999999999999999999985421
Q ss_pred -------------cceeceeeEEEcCCCcEEEeecCCCCCCCC-cceeEEEECCEEEEEcC
Q psy8877 133 -------------EEHYNDIYRYCTRRQEWARVIPHGAPPTKR-RRQSCIIKGDTLIMFGG 179 (180)
Q Consensus 133 -------------~~~~~~~~~~d~~~~~W~~~~~~~~~~~~r-~~~~~~~~~~~i~~~GG 179 (180)
....+++++||+.+++|+.++.+ |.+| ..++++.++++||++||
T Consensus 151 ~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~---p~~~~~~~~~~~~~~~iyv~GG 208 (357)
T 2uvk_A 151 KINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGES---PWYGTAGAAVVNKGDKTWLING 208 (357)
T ss_dssp HHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEEC---SSCCCBSCEEEEETTEEEEECC
T ss_pred hhhhhhccccccccCCcccEEEEeCCCCcEEECCCC---CCCCcccccEEEECCEEEEEee
Confidence 01357999999999999999875 3444 44888889999999998
No 15
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.97 E-value=3.2e-30 Score=205.69 Aligned_cols=166 Identities=14% Similarity=0.137 Sum_probs=143.0
Q ss_pred CceEEec-c-----CCCCCcCeeEEEe--CCEEEEEccccCCC-CCceeeecC---------CCCCCcceeeeEEEE-CC
Q psy8877 1 MHWTVHL-T-----GGPRRVNHAAVLN--DNKIFTFGGYCSGE-DYVKRRPMD---------GEPPSYRDFHTANII-DG 61 (180)
Q Consensus 1 ~~W~~~~-~-----~~~~r~~~~~~~~--~~~iy~~GG~~~~~-~~~~~~~~~---------~~~p~~r~~~~~~~~-~~ 61 (180)
.+|+.++ + +|.+|.+|+++++ +++||++||..... ..++++.|| +++|.+|..|+++.+ ++
T Consensus 422 ~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~ 501 (695)
T 2zwa_A 422 DKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDG 501 (695)
T ss_dssp SCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTS
T ss_pred CeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCC
Confidence 3699887 5 7889999999999 99999999987644 567788887 778999999999997 99
Q ss_pred EEEEEcCCCCCCCcccCCCceecCcEEEEECCCCeEEeecCCCCCCCCceeeEEEEEC---CEEEEEcCccCCccceece
Q psy8877 62 RMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYG---DGLYIFGGYNGLVEEHYND 138 (180)
Q Consensus 62 ~lyv~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~~---~~i~v~GG~~~~~~~~~~~ 138 (180)
+|||+||.... . ++++||+.+++|+.++..+.+|.+|..|+++.++ ++|||+||.........++
T Consensus 502 ~iyv~GG~~~~---------~---~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~ 569 (695)
T 2zwa_A 502 NVLILGGVTEG---------P---AMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDK 569 (695)
T ss_dssp CEEEECCBCSS---------C---SEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCE
T ss_pred EEEEECCCCCC---------C---CEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCc
Confidence 99999998762 2 8999999999999998766789999999988876 8999999986543356789
Q ss_pred eeEEEcCCCc------EEEeecCCCCCCCCcceeEEEEC-CEEEEEcCC
Q psy8877 139 IYRYCTRRQE------WARVIPHGAPPTKRRRQSCIIKG-DTLIMFGGS 180 (180)
Q Consensus 139 ~~~~d~~~~~------W~~~~~~~~~~~~r~~~~~~~~~-~~i~~~GG~ 180 (180)
+++||+.+++ |+.+..+ ++.+|..|++++++ ++||++||.
T Consensus 570 v~~yd~~~~~w~~~~~W~~~~~~--p~~~R~~~~~~~~~~~~iyv~GG~ 616 (695)
T 2zwa_A 570 AIIFKYDAENATEPITVIKKLQH--PLFQRYGSQIKYITPRKLLIVGGT 616 (695)
T ss_dssp EEEEEECTTCSSCCEEEEEEEEC--GGGCCBSCEEEEEETTEEEEECCB
T ss_pred EEEEEccCCccccceEEEEcCCC--CCCCcccceEEEeCCCEEEEECCc
Confidence 9999999999 8998774 34789999999998 999999994
No 16
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.96 E-value=6.9e-29 Score=198.07 Aligned_cols=160 Identities=21% Similarity=0.233 Sum_probs=133.6
Q ss_pred eEEeccCCCCCcCeeEEEeCCEEEEEccccCCCCCceeeecC---------C-C-----CCCcceeeeEEEE--CCEEEE
Q psy8877 3 WTVHLTGGPRRVNHAAVLNDNKIFTFGGYCSGEDYVKRRPMD---------G-E-----PPSYRDFHTANII--DGRMYI 65 (180)
Q Consensus 3 W~~~~~~~~~r~~~~~~~~~~~iy~~GG~~~~~~~~~~~~~~---------~-~-----~p~~r~~~~~~~~--~~~lyv 65 (180)
|...+..|++|++++++ ++++||++||... ...++++.|| . + +|.+|.+|+++.+ +++|||
T Consensus 379 ~~~~~~~p~rr~g~~~~-~~~~iyv~GG~~~-~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv 456 (695)
T 2zwa_A 379 LLECECPINRKFGDVDV-AGNDVFYMGGSNP-YRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLL 456 (695)
T ss_dssp EEECCCTTCCBSCEEEE-CSSCEEEECCBSS-SBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEE
T ss_pred EeccCCCCCCceeEEEE-ECCEEEEECCCCC-CCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEE
Confidence 44445556677766544 8999999999866 5667777777 2 3 7899999999999 999999
Q ss_pred EcCCCCCCCcccCCCceecCcEEEEECCCCeEEeecCCCCCCCCceeeEEEEE-CCEEEEEcCccCCccceeceeeEEEc
Q psy8877 66 WGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVY-GDGLYIFGGYNGLVEEHYNDIYRYCT 144 (180)
Q Consensus 66 ~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~~d~ 144 (180)
+||.... ....+++++||+.+++|+.+. .+|.+|..|+++.+ +++|||+||..... ++++||+
T Consensus 457 ~GG~~~~--------~~~~~dv~~yd~~t~~W~~~~---~~p~~R~~h~~~~~~~~~iyv~GG~~~~~-----~v~~yd~ 520 (695)
T 2zwa_A 457 IGGRKAP--------HQGLSDNWIFDMKTREWSMIK---SLSHTRFRHSACSLPDGNVLILGGVTEGP-----AMLLYNV 520 (695)
T ss_dssp ECCBSST--------TCBCCCCEEEETTTTEEEECC---CCSBCCBSCEEEECTTSCEEEECCBCSSC-----SEEEEET
T ss_pred EcCCCCC--------CCccccEEEEeCCCCcEEECC---CCCCCcccceEEEEcCCEEEEECCCCCCC-----CEEEEEC
Confidence 9998762 235789999999999999985 48999999999997 99999999997652 8999999
Q ss_pred CCCcEEEeecCCCCCCCCcceeEEEEC---CEEEEEcCC
Q psy8877 145 RRQEWARVIPHGAPPTKRRRQSCIIKG---DTLIMFGGS 180 (180)
Q Consensus 145 ~~~~W~~~~~~~~~~~~r~~~~~~~~~---~~i~~~GG~ 180 (180)
.+++|+.++..+..|.+|..|++++++ ++||++||.
T Consensus 521 ~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~ 559 (695)
T 2zwa_A 521 TEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGG 559 (695)
T ss_dssp TTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCB
T ss_pred CCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCc
Confidence 999999999866567899999988776 899999994
No 17
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.91 E-value=8.8e-24 Score=167.99 Aligned_cols=169 Identities=15% Similarity=0.128 Sum_probs=126.7
Q ss_pred CceEEeccCCCCCcCeeEEEe-CCEEEEEccc-cCCCCCceeeecC--------------CCCCCc--------------
Q psy8877 1 MHWTVHLTGGPRRVNHAAVLN-DNKIFTFGGY-CSGEDYVKRRPMD--------------GEPPSY-------------- 50 (180)
Q Consensus 1 ~~W~~~~~~~~~r~~~~~~~~-~~~iy~~GG~-~~~~~~~~~~~~~--------------~~~p~~-------------- 50 (180)
.+|..+++|+.+|.+|+++++ +++||++||. ......++++.|| .+++..
T Consensus 275 ~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv 354 (656)
T 1k3i_A 275 DSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWL 354 (656)
T ss_dssp TEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCE
T ss_pred CceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecCCceEE
Confidence 379999999999999999999 9999999994 4333344455544 011111
Q ss_pred -------------------------------------------ceeeeEEE---ECCEEEEEcCCCCCCCcccCCCceec
Q psy8877 51 -------------------------------------------RDFHTANI---IDGRMYIWGGRGDESSLYHSGSEVYC 84 (180)
Q Consensus 51 -------------------------------------------r~~~~~~~---~~~~lyv~GG~~~~~~~~~~~~~~~~ 84 (180)
+..++++. .+++||++||...... ....
T Consensus 355 ~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~------~~~~ 428 (656)
T 1k3i_A 355 FGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQD------SDAT 428 (656)
T ss_dssp EECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSS------SBCC
T ss_pred EECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCC------CCcC
Confidence 12233332 4789999999753111 1223
Q ss_pred C---cEEEEECCCCeEEeecCCCCCCCCceeeEEEEE-CCEEEEEcCccCC----ccceeceeeEEEcCCCcEEEeecCC
Q psy8877 85 P---DLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVY-GDGLYIFGGYNGL----VEEHYNDIYRYCTRRQEWARVIPHG 156 (180)
Q Consensus 85 ~---~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~-~~~i~v~GG~~~~----~~~~~~~~~~~d~~~~~W~~~~~~~ 156 (180)
+ .+++||+.+++|..+. .+.||.+|..|+++.+ +++|||+||.... ......+++.||+++++|+.++.+
T Consensus 429 ~~~~~v~~yd~~~~~W~~~~-~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~- 506 (656)
T 1k3i_A 429 TNAHIITLGEPGTSPNTVFA-SNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPN- 506 (656)
T ss_dssp CCEEEEECCSTTSCCEEEEC-TTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCC-
T ss_pred CcceEEEcCCCCCCCeeEEc-cCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCC-
Confidence 3 7899999999999986 2369999999998888 8999999997632 124577899999999999998764
Q ss_pred CCCCCCcceeEEEE--CCEEEEEcC
Q psy8877 157 APPTKRRRQSCIIK--GDTLIMFGG 179 (180)
Q Consensus 157 ~~~~~r~~~~~~~~--~~~i~~~GG 179 (180)
+.+|..|+++++ +++||++||
T Consensus 507 --~~~R~~hs~a~ll~dg~v~v~GG 529 (656)
T 1k3i_A 507 --SIVRVYHSISLLLPDGRVFNGGG 529 (656)
T ss_dssp --SSCCCTTEEEEECTTSCEEEEEC
T ss_pred --CCccccccHhhcCCCcEEEecCC
Confidence 589999998887 999999998
No 18
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.89 E-value=1.1e-22 Score=161.65 Aligned_cols=166 Identities=13% Similarity=0.118 Sum_probs=121.2
Q ss_pred CceEEeccCCCCCcCee--EE-EeCCEEEEEccccCCCCCceeeecC---------CCCCCcceeeeEEEE-CCEEEEEc
Q psy8877 1 MHWTVHLTGGPRRVNHA--AV-LNDNKIFTFGGYCSGEDYVKRRPMD---------GEPPSYRDFHTANII-DGRMYIWG 67 (180)
Q Consensus 1 ~~W~~~~~~~~~r~~~~--~~-~~~~~iy~~GG~~~~~~~~~~~~~~---------~~~p~~r~~~~~~~~-~~~lyv~G 67 (180)
.+|..++.++.+|..++ ++ +.+++||++||.... ++++|| .++|.+|..|+++++ +++||++|
T Consensus 229 ~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~----~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~G 304 (656)
T 1k3i_A 229 GIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAK----KTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIG 304 (656)
T ss_dssp CCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTT----CEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEEC
T ss_pred CcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCC----ceEEecCcCCceeECCCCCccccccceEEecCCeEEEEe
Confidence 46888888887776654 44 368999999997543 455555 678999999999999 99999999
Q ss_pred CCCCCCCcccCCCceecCcEEEEECCCCeEEeecCCC--CCCC-------------------------------------
Q psy8877 68 GRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTG--SVPV------------------------------------- 108 (180)
Q Consensus 68 G~~~~~~~~~~~~~~~~~~~~~~d~~~~~w~~~~~~~--~~~~------------------------------------- 108 (180)
|.... ....+++++||+.+++|+.++..+ .++.
T Consensus 305 G~~~~--------~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~ 376 (656)
T 1k3i_A 305 GSWSG--------GVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYT 376 (656)
T ss_dssp CCCCS--------SSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEEC
T ss_pred CcccC--------CcccccceEeCCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeec
Confidence 95331 235688999999999999973211 0111
Q ss_pred --------------------CceeeEEEE---ECCEEEEEcCccCCc-cceec---eeeEEEcCCCcEEEeecCCCCCCC
Q psy8877 109 --------------------GRRSHSAFV---YGDGLYIFGGYNGLV-EEHYN---DIYRYCTRRQEWARVIPHGAPPTK 161 (180)
Q Consensus 109 --------------------~r~~~~~~~---~~~~i~v~GG~~~~~-~~~~~---~~~~~d~~~~~W~~~~~~~~~~~~ 161 (180)
++..++++. .+++||++||..... ....+ .+++||+.+++|+.+.. ..+|.+
T Consensus 377 ~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~-~~mp~~ 455 (656)
T 1k3i_A 377 SGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFAS-NGLYFA 455 (656)
T ss_dssp STTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECT-TCCSSC
T ss_pred CCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEcc-CCCCCC
Confidence 122344443 479999999975321 12333 78999999999999871 125689
Q ss_pred CcceeEEEE-CCEEEEEcC
Q psy8877 162 RRRQSCIIK-GDTLIMFGG 179 (180)
Q Consensus 162 r~~~~~~~~-~~~i~~~GG 179 (180)
|..|+++++ +++||++||
T Consensus 456 R~~~~~~~l~~g~i~v~GG 474 (656)
T 1k3i_A 456 RTFHTSVVLPDGSTFITGG 474 (656)
T ss_dssp CBSCEEEECTTSCEEEECC
T ss_pred cccCCeEECCCCCEEEECC
Confidence 999998888 999999998
No 19
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.16 E-value=0.03 Score=39.01 Aligned_cols=111 Identities=13% Similarity=-0.007 Sum_probs=71.3
Q ss_pred CCCCcCeeEEEeCCEEEEEccccCCCCCceeeecC---------CCCCCcceeeeEEEECCEEEEEcCCCCCCCcccCCC
Q psy8877 10 GPRRVNHAAVLNDNKIFTFGGYCSGEDYVKRRPMD---------GEPPSYRDFHTANIIDGRMYIWGGRGDESSLYHSGS 80 (180)
Q Consensus 10 ~~~r~~~~~~~~~~~iy~~GG~~~~~~~~~~~~~~---------~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~ 80 (180)
++.-+-+++...++.+|+-.|..+. +.+..+| -.++..-....++..+++||+....
T Consensus 18 d~~~ftqGL~~~~~~LyestG~~g~---S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~----------- 83 (243)
T 3mbr_X 18 DTTAFTEGLFYLRGHLYESTGETGR---SSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWR----------- 83 (243)
T ss_dssp CTTCCEEEEEEETTEEEEEECCTTS---CEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESS-----------
T ss_pred CCccccccEEEECCEEEEECCCCCC---ceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEee-----------
Confidence 3455667999999999999986443 2334444 2234444455678889999998532
Q ss_pred ceecCcEEEEECCCCeEEe-ecCCCCCCCCceeeEEEEECCEEEEEcCccCCccceeceeeEEEcCCCcEEE
Q psy8877 81 EVYCPDLVYLDLKYFTWIR-PNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWAR 151 (180)
Q Consensus 81 ~~~~~~~~~~d~~~~~w~~-~~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~W~~ 151 (180)
.+.+++||.++.+-.. ++. +..+-..+.-++++|+.-| .+.++.+|+++.+-..
T Consensus 84 ---~~~v~v~D~~tl~~~~ti~~------~~~Gwglt~dg~~L~vSdg--------s~~l~~iDp~t~~~~~ 138 (243)
T 3mbr_X 84 ---NHEGFVYDLATLTPRARFRY------PGEGWALTSDDSHLYMSDG--------TAVIRKLDPDTLQQVG 138 (243)
T ss_dssp ---SSEEEEEETTTTEEEEEEEC------SSCCCEEEECSSCEEEECS--------SSEEEEECTTTCCEEE
T ss_pred ---CCEEEEEECCcCcEEEEEeC------CCCceEEeeCCCEEEEECC--------CCeEEEEeCCCCeEEE
Confidence 2678999998876543 322 2233344455667888644 2368899998865443
No 20
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=96.73 E-value=0.077 Score=36.94 Aligned_cols=82 Identities=12% Similarity=0.037 Sum_probs=58.9
Q ss_pred CCcceeeeEEEECCEEEEEcCCCCCCCcccCCCceecCcEEEEECCCCeEEeecCCCCCCCCceeeEEEEECCEEEEEcC
Q psy8877 48 PSYRDFHTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGG 127 (180)
Q Consensus 48 p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~i~v~GG 127 (180)
+.....+.++..++.||+-.|..+ .+.+.++|+++.+-.+-. .++..-++...+..++++|+...
T Consensus 18 d~~~ftqGL~~~~~~LyestG~~g------------~S~v~~vD~~tgkv~~~~---~l~~~~fgeGi~~~~~~ly~ltw 82 (243)
T 3mbr_X 18 DTTAFTEGLFYLRGHLYESTGETG------------RSSVRKVDLETGRILQRA---EVPPPYFGAGIVAWRDRLIQLTW 82 (243)
T ss_dssp CTTCCEEEEEEETTEEEEEECCTT------------SCEEEEEETTTCCEEEEE---ECCTTCCEEEEEEETTEEEEEES
T ss_pred CCccccccEEEECCEEEEECCCCC------------CceEEEEECCCCCEEEEE---eCCCCcceeEEEEeCCEEEEEEe
Confidence 334455677888899999988755 267899999999766532 24545566777788999999843
Q ss_pred ccCCccceeceeeEEEcCCCcEEE
Q psy8877 128 YNGLVEEHYNDIYRYCTRRQEWAR 151 (180)
Q Consensus 128 ~~~~~~~~~~~~~~~d~~~~~W~~ 151 (180)
. .+.+++||+++.+-..
T Consensus 83 ~-------~~~v~v~D~~tl~~~~ 99 (243)
T 3mbr_X 83 R-------NHEGFVYDLATLTPRA 99 (243)
T ss_dssp S-------SSEEEEEETTTTEEEE
T ss_pred e-------CCEEEEEECCcCcEEE
Confidence 3 3479999988776554
No 21
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.51 E-value=0.12 Score=36.47 Aligned_cols=107 Identities=10% Similarity=-0.090 Sum_probs=67.6
Q ss_pred CCcCeeEEEeCCEEEEEccccCCCCCceeeecC-------C-CCCCcceeeeEEEECCEEEEEcCCCCCCCcccCCCcee
Q psy8877 12 RRVNHAAVLNDNKIFTFGGYCSGEDYVKRRPMD-------G-EPPSYRDFHTANIIDGRMYIWGGRGDESSLYHSGSEVY 83 (180)
Q Consensus 12 ~r~~~~~~~~~~~iy~~GG~~~~~~~~~~~~~~-------~-~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~ 83 (180)
.-+.+++...++.||+..|..+. +..+| . .++..-....++..+++||+....
T Consensus 54 ~~ftqGL~~~~~~Ly~stG~~g~-----v~~iD~~Tgkv~~~~l~~~~FgeGit~~g~~Ly~ltw~-------------- 114 (268)
T 3nok_A 54 NAFTQGLVFHQGHFFESTGHQGT-----LRQLSLESAQPVWMERLGNIFAEGLASDGERLYQLTWT-------------- 114 (268)
T ss_dssp TCCEEEEEEETTEEEEEETTTTE-----EEECCSSCSSCSEEEECTTCCEEEEEECSSCEEEEESS--------------
T ss_pred ccccceEEEECCEEEEEcCCCCE-----EEEEECCCCcEEeEECCCCcceeEEEEeCCEEEEEEcc--------------
Confidence 33457888889999999986432 44444 1 123222334567778899998432
Q ss_pred cCcEEEEECCCCeEEe-ecCCCCCCCCceeeEEEEECCEEEEEcCccCCccceeceeeEEEcCCCcEEE
Q psy8877 84 CPDLVYLDLKYFTWIR-PNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWAR 151 (180)
Q Consensus 84 ~~~~~~~d~~~~~w~~-~~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~W~~ 151 (180)
.+.+++||+++.+-.. ++. +-.+...+.-++++|+.-| .+.++.+|+++.+-..
T Consensus 115 ~~~v~V~D~~Tl~~~~ti~~------~~eGwGLt~Dg~~L~vSdG--------s~~l~~iDp~T~~v~~ 169 (268)
T 3nok_A 115 EGLLFTWSGMPPQRERTTRY------SGEGWGLCYWNGKLVRSDG--------GTMLTFHEPDGFALVG 169 (268)
T ss_dssp SCEEEEEETTTTEEEEEEEC------SSCCCCEEEETTEEEEECS--------SSEEEEECTTTCCEEE
T ss_pred CCEEEEEECCcCcEEEEEeC------CCceeEEecCCCEEEEECC--------CCEEEEEcCCCCeEEE
Confidence 2678999999876553 322 1123345556778888754 2378899998865443
No 22
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=96.51 E-value=0.12 Score=36.37 Aligned_cols=108 Identities=7% Similarity=-0.095 Sum_probs=66.7
Q ss_pred CCcCeeEEEeCCEEEEEccccCCCCCceeeecC---------CCCCCcceeeeEEEECCEEEEEcCCCCCCCcccCCCce
Q psy8877 12 RRVNHAAVLNDNKIFTFGGYCSGEDYVKRRPMD---------GEPPSYRDFHTANIIDGRMYIWGGRGDESSLYHSGSEV 82 (180)
Q Consensus 12 ~r~~~~~~~~~~~iy~~GG~~~~~~~~~~~~~~---------~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~ 82 (180)
.-+.+++...++.+|+-.|..+. +.+..+| -.++..-....++..+++||+....
T Consensus 42 ~~ftqGL~~~~~~LyestG~~g~---S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~------------- 105 (262)
T 3nol_A 42 KAFTEGFFYRNGYFYESTGLNGR---SSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWK------------- 105 (262)
T ss_dssp TCEEEEEEEETTEEEEEEEETTE---EEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESS-------------
T ss_pred CcccceEEEECCEEEEECCCCCC---ceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEee-------------
Confidence 34557888888999999886432 3344444 1233333344577789999999542
Q ss_pred ecCcEEEEECCCCeEEe-ecCCCCCCCCceeeEEEEECCEEEEEcCccCCccceeceeeEEEcCCCcEE
Q psy8877 83 YCPDLVYLDLKYFTWIR-PNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWA 150 (180)
Q Consensus 83 ~~~~~~~~d~~~~~w~~-~~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~W~ 150 (180)
.+.+++||+++.+-.. ++. +-.+...+.-++++|+.-| .+.++.+|+++.+-.
T Consensus 106 -~~~v~v~D~~t~~~~~ti~~------~~eG~glt~dg~~L~~SdG--------s~~i~~iDp~T~~v~ 159 (262)
T 3nol_A 106 -NGLGFVWNIRNLRQVRSFNY------DGEGWGLTHNDQYLIMSDG--------TPVLRFLDPESLTPV 159 (262)
T ss_dssp -SSEEEEEETTTCCEEEEEEC------SSCCCCEEECSSCEEECCS--------SSEEEEECTTTCSEE
T ss_pred -CCEEEEEECccCcEEEEEEC------CCCceEEecCCCEEEEECC--------CCeEEEEcCCCCeEE
Confidence 2678999998876443 322 1133344444566777543 236899999876543
No 23
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=95.84 E-value=0.29 Score=34.47 Aligned_cols=78 Identities=9% Similarity=-0.066 Sum_probs=54.1
Q ss_pred eeeeEEEECCEEEEEcCCCCCCCcccCCCceecCcEEEEECCCCeEEeecCCCCCCCCceeeEEEEECCEEEEEcCccCC
Q psy8877 52 DFHTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGL 131 (180)
Q Consensus 52 ~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~ 131 (180)
....+...++.||+..|..+ .+.+.++|+++.+-.+-.. ++..-++...+..++++|+....
T Consensus 44 ftqGL~~~~~~LyestG~~g------------~S~v~~vD~~Tgkv~~~~~---l~~~~FgeGit~~g~~ly~ltw~--- 105 (262)
T 3nol_A 44 FTEGFFYRNGYFYESTGLNG------------RSSIRKVDIESGKTLQQIE---LGKRYFGEGISDWKDKIVGLTWK--- 105 (262)
T ss_dssp EEEEEEEETTEEEEEEEETT------------EEEEEEECTTTCCEEEEEE---CCTTCCEEEEEEETTEEEEEESS---
T ss_pred ccceEEEECCEEEEECCCCC------------CceEEEEECCCCcEEEEEe---cCCccceeEEEEeCCEEEEEEee---
Confidence 33556666889999988654 2678899999987654322 44444556677789999998432
Q ss_pred ccceeceeeEEEcCCCcEEE
Q psy8877 132 VEEHYNDIYRYCTRRQEWAR 151 (180)
Q Consensus 132 ~~~~~~~~~~~d~~~~~W~~ 151 (180)
.+.+++||+++.+-..
T Consensus 106 ----~~~v~v~D~~t~~~~~ 121 (262)
T 3nol_A 106 ----NGLGFVWNIRNLRQVR 121 (262)
T ss_dssp ----SSEEEEEETTTCCEEE
T ss_pred ----CCEEEEEECccCcEEE
Confidence 3478999998776543
No 24
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=93.70 E-value=1.2 Score=31.30 Aligned_cols=108 Identities=12% Similarity=0.067 Sum_probs=63.7
Q ss_pred cCeeEEEeC-CEEEEEccccCCCCCceeeecC-------C--CCCCcceeeeEEEECCEEEEEcCCCCCCCcccCCCcee
Q psy8877 14 VNHAAVLND-NKIFTFGGYCSGEDYVKRRPMD-------G--EPPSYRDFHTANIIDGRMYIWGGRGDESSLYHSGSEVY 83 (180)
Q Consensus 14 ~~~~~~~~~-~~iy~~GG~~~~~~~~~~~~~~-------~--~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~ 83 (180)
+.++++..+ +.+|+..|.... +.+..+| . +++........+..+++||+..-.
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~---s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~-------------- 84 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGR---SSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWL-------------- 84 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTT---CEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETT--------------
T ss_pred CcccEEEeCCCeEEEECCCCCC---CEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEec--------------
Confidence 457888877 899998774221 3344444 1 122222334567778899998532
Q ss_pred cCcEEEEECCCCeEEe-ecCCCCCCCCceeeEEEEECCEEEEEcCccCCccceeceeeEEEcCCCcEEE
Q psy8877 84 CPDLVYLDLKYFTWIR-PNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWAR 151 (180)
Q Consensus 84 ~~~~~~~d~~~~~w~~-~~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~W~~ 151 (180)
.+.+.+||+.+.+-.. ++. + +|.+ -..+.-++++|+.-| .+.+..+|+++.+-..
T Consensus 85 ~~~v~viD~~t~~v~~~i~~-g-~~~g---~glt~Dg~~l~vs~g--------s~~l~viD~~t~~v~~ 140 (266)
T 2iwa_A 85 KNIGFIYDRRTLSNIKNFTH-Q-MKDG---WGLATDGKILYGSDG--------TSILYEIDPHTFKLIK 140 (266)
T ss_dssp CSEEEEEETTTTEEEEEEEC-C-SSSC---CEEEECSSSEEEECS--------SSEEEEECTTTCCEEE
T ss_pred CCEEEEEECCCCcEEEEEEC-C-CCCe---EEEEECCCEEEEECC--------CCeEEEEECCCCcEEE
Confidence 2668999998875433 332 2 2322 223334566887643 2378999998865433
No 25
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=93.67 E-value=1.3 Score=31.30 Aligned_cols=96 Identities=10% Similarity=-0.002 Sum_probs=59.8
Q ss_pred eeeEEEECCEEEEEcCCCCCCCcccCCCceecCcEEEEECCCCeEEeecCCCCCCCCceeeEEEEECCEEEEEcCccCCc
Q psy8877 53 FHTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLV 132 (180)
Q Consensus 53 ~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~ 132 (180)
...+...++.||+..|..+ . +.++|+++.+-.+-. ++..-++...+..++++|+....
T Consensus 57 tqGL~~~~~~Ly~stG~~g----------~----v~~iD~~Tgkv~~~~----l~~~~FgeGit~~g~~Ly~ltw~---- 114 (268)
T 3nok_A 57 TQGLVFHQGHFFESTGHQG----------T----LRQLSLESAQPVWME----RLGNIFAEGLASDGERLYQLTWT---- 114 (268)
T ss_dssp EEEEEEETTEEEEEETTTT----------E----EEECCSSCSSCSEEE----ECTTCCEEEEEECSSCEEEEESS----
T ss_pred cceEEEECCEEEEEcCCCC----------E----EEEEECCCCcEEeEE----CCCCcceeEEEEeCCEEEEEEcc----
Confidence 3566777889999988755 2 788899888644321 22233455567778999997432
Q ss_pred cceeceeeEEEcCCCcEEEeecCCCCCCCCcceeEEEECCEEEEEc
Q psy8877 133 EEHYNDIYRYCTRRQEWARVIPHGAPPTKRRRQSCIIKGDTLIMFG 178 (180)
Q Consensus 133 ~~~~~~~~~~d~~~~~W~~~~~~~~~~~~r~~~~~~~~~~~i~~~G 178 (180)
.+.+++||+++.+-..--+. +..+.+++.-++++|+.-
T Consensus 115 ---~~~v~V~D~~Tl~~~~ti~~-----~~eGwGLt~Dg~~L~vSd 152 (268)
T 3nok_A 115 ---EGLLFTWSGMPPQRERTTRY-----SGEGWGLCYWNGKLVRSD 152 (268)
T ss_dssp ---SCEEEEEETTTTEEEEEEEC-----SSCCCCEEEETTEEEEEC
T ss_pred ---CCEEEEEECCcCcEEEEEeC-----CCceeEEecCCCEEEEEC
Confidence 34799999987765543222 122344444455666654
No 26
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=93.64 E-value=1.7 Score=32.79 Aligned_cols=114 Identities=17% Similarity=0.072 Sum_probs=66.0
Q ss_pred ceEEe--ccCCCCCcCeeEEEeCCEEEEEccccCCCCCce---eee---cC-----------CCCCCcceeeeEEEECCE
Q psy8877 2 HWTVH--LTGGPRRVNHAAVLNDNKIFTFGGYCSGEDYVK---RRP---MD-----------GEPPSYRDFHTANIIDGR 62 (180)
Q Consensus 2 ~W~~~--~~~~~~r~~~~~~~~~~~iy~~GG~~~~~~~~~---~~~---~~-----------~~~p~~r~~~~~~~~~~~ 62 (180)
.|++. +..|..-.-|+.|.+++.-|.+|=-.+.-...+ ++. ++ .+.....+..++-.+++.
T Consensus 271 pW~~t~L~~i~~vTe~HSFa~i~~~~fa~GyHnGDv~PRe~G~~yfs~~~~sp~~~vrr~i~sey~~~AsEPCvkyYdgv 350 (670)
T 3ju4_A 271 PWRKTDLGLIPSVTEVHSFATIDNNGFAMGYHQGDVAPREVGLFYFPDAFNSPSNYVRRQIPSEYEPDASEPCIKYYDGV 350 (670)
T ss_dssp CCEEEECCSCTTCSEEEEEEECSSSCEEEEEEECSSSSCEEEEEEETTTTTCTTCCEEEECCGGGCTTEEEEEEEEETTE
T ss_pred CceecccccccceeeeeeeeEecCCceEEEeccCCCCcceeeEEEecccccCCcceeeeechhhhccccccchhhhhCCE
Confidence 57654 344555567999999999999973211111111 111 11 222223344455668999
Q ss_pred EEEEcCCCCCCCcccCCCceecCcEEEEECCCCeEEeecCCCCCCCCc--eeeEEEEECCEEEEEcC
Q psy8877 63 MYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGR--RSHSAFVYGDGLYIFGG 127 (180)
Q Consensus 63 lyv~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~r--~~~~~~~~~~~i~v~GG 127 (180)
||+.--.+.+ ...=+.+.+-+....+|..+.. |... ....-+.+++.||+||-
T Consensus 351 LyLtTRgt~~--------~~~GS~L~rs~d~Gq~w~slrf----p~nvHhtnlPFakvgD~l~mFgs 405 (670)
T 3ju4_A 351 LYLITRGTRG--------DRLGSSLHRSRDIGQTWESLRF----PHNVHHTTLPFAKVGDDLIMFGS 405 (670)
T ss_dssp EEEEEEESCT--------TSCCCEEEEESSTTSSCEEEEC----TTCCCSSCCCEEEETTEEEEEEE
T ss_pred EEEEecCcCC--------CCCcceeeeecccCCchhheec----cccccccCCCcceeCCEEEEEec
Confidence 9998533221 2333667777778889999853 3221 12234578999999984
No 27
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=92.71 E-value=2 Score=30.80 Aligned_cols=116 Identities=11% Similarity=0.071 Sum_probs=63.9
Q ss_pred CcCeeEEEeCCEEEEEccccCCCCCceeeecCCC-------CCCcceeeeEEE-ECCEEEEEcCCCCCCCcccCCCceec
Q psy8877 13 RVNHAAVLNDNKIFTFGGYCSGEDYVKRRPMDGE-------PPSYRDFHTANI-IDGRMYIWGGRGDESSLYHSGSEVYC 84 (180)
Q Consensus 13 r~~~~~~~~~~~iy~~GG~~~~~~~~~~~~~~~~-------~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~ 84 (180)
...+.++..++++|+..... ..+..+|.. .+....-..++. -++++|+.... .
T Consensus 44 ~~~~~i~~~~~~lyv~~~~~-----~~v~viD~~t~~~~~~i~~~~~p~~i~~~~~g~lyv~~~~--------------~ 104 (328)
T 3dsm_A 44 DVAQSMVIRDGIGWIVVNNS-----HVIFAIDINTFKEVGRITGFTSPRYIHFLSDEKAYVTQIW--------------D 104 (328)
T ss_dssp SCEEEEEEETTEEEEEEGGG-----TEEEEEETTTCCEEEEEECCSSEEEEEEEETTEEEEEEBS--------------C
T ss_pred ccceEEEEECCEEEEEEcCC-----CEEEEEECcccEEEEEcCCCCCCcEEEEeCCCeEEEEECC--------------C
Confidence 34567778899999997532 122333310 011112223444 57799988532 2
Q ss_pred CcEEEEECCCCeEEe-ecCCCCCC-CCceeeEEEEECCEEEEEcCccCCccceeceeeEEEcCCCcEEEeec
Q psy8877 85 PDLVYLDLKYFTWIR-PNTTGSVP-VGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIP 154 (180)
Q Consensus 85 ~~~~~~d~~~~~w~~-~~~~~~~~-~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~ 154 (180)
..+.++|+.+.+-.. ++. +... ....-+.++..++++|+..- . ..+.+.++|+++.+....-.
T Consensus 105 ~~v~~iD~~t~~~~~~i~~-g~~~~~~~~p~~i~~~~~~lyv~~~-~-----~~~~v~viD~~t~~~~~~i~ 169 (328)
T 3dsm_A 105 YRIFIINPKTYEITGYIEC-PDMDMESGSTEQMVQYGKYVYVNCW-S-----YQNRILKIDTETDKVVDELT 169 (328)
T ss_dssp SEEEEEETTTTEEEEEEEC-TTCCTTTCBCCCEEEETTEEEEEEC-T-----TCCEEEEEETTTTEEEEEEE
T ss_pred CeEEEEECCCCeEEEEEEc-CCccccCCCcceEEEECCEEEEEcC-C-----CCCEEEEEECCCCeEEEEEE
Confidence 568999999987653 332 2200 00011223346888988731 0 12378999999887665433
No 28
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=90.95 E-value=3 Score=29.32 Aligned_cols=75 Identities=9% Similarity=-0.066 Sum_probs=49.3
Q ss_pred eeEEEEC-CEEEEEcCCCCCCCcccCCCceecCcEEEEECCCCeEEeecCCCCCCCCceeeEEEEECCEEEEEcCccCCc
Q psy8877 54 HTANIID-GRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLV 132 (180)
Q Consensus 54 ~~~~~~~-~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~ 132 (180)
+.++..+ +.||+..|... .+.+.++|+.+.+-..-.. .+...+....+..++++|+..-
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~------------~s~v~~iD~~tg~v~~~i~---l~~~~fgeGi~~~g~~lyv~t~----- 83 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYG------------RSSVRQVALQTGKVENIHK---MDDSYFGEGLTLLNEKLYQVVW----- 83 (266)
T ss_dssp EEEEECSTTEEEEEECSTT------------TCEEEEEETTTCCEEEEEE---CCTTCCEEEEEEETTEEEEEET-----
T ss_pred ccEEEeCCCeEEEECCCCC------------CCEEEEEECCCCCEEEEEe---cCCCcceEEEEEeCCEEEEEEe-----
Confidence 4555555 79999877433 2679999999987655321 2333344556667889999742
Q ss_pred cceeceeeEEEcCCCcEE
Q psy8877 133 EEHYNDIYRYCTRRQEWA 150 (180)
Q Consensus 133 ~~~~~~~~~~d~~~~~W~ 150 (180)
..+.+++||+.+.+-.
T Consensus 84 --~~~~v~viD~~t~~v~ 99 (266)
T 2iwa_A 84 --LKNIGFIYDRRTLSNI 99 (266)
T ss_dssp --TCSEEEEEETTTTEEE
T ss_pred --cCCEEEEEECCCCcEE
Confidence 2347999998876433
No 29
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=86.34 E-value=7.6 Score=28.05 Aligned_cols=109 Identities=11% Similarity=0.069 Sum_probs=58.3
Q ss_pred eeEEEeCCEEEEEcccc-----CCCCCceeeecCCCCC-------CcceeeeEEEECCEEEEEcCCCCCCCcccCCCcee
Q psy8877 16 HAAVLNDNKIFTFGGYC-----SGEDYVKRRPMDGEPP-------SYRDFHTANIIDGRMYIWGGRGDESSLYHSGSEVY 83 (180)
Q Consensus 16 ~~~~~~~~~iy~~GG~~-----~~~~~~~~~~~~~~~p-------~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~ 83 (180)
.+.++.+++||+..... ....-+..|.++.... ........+..++.+|+...
T Consensus 47 ~~p~v~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~--------------- 111 (376)
T 3q7m_A 47 LHPALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSE--------------- 111 (376)
T ss_dssp CCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEET---------------
T ss_pred eccEEECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcC---------------
Confidence 36677889999886421 0011123343332111 22233445566888887532
Q ss_pred cCcEEEEECCCC--eEEeecCCCCCCCCceeeEEEEECCEEEEEcCccCCccceeceeeEEEcCCCc--EEEee
Q psy8877 84 CPDLVYLDLKYF--TWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQE--WARVI 153 (180)
Q Consensus 84 ~~~~~~~d~~~~--~w~~~~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~--W~~~~ 153 (180)
...++.+|.++. .|+.-.. .. .....+..++.+|+... ...++.+|+.+.+ |+.-.
T Consensus 112 ~g~l~a~d~~tG~~~W~~~~~-----~~-~~~~p~~~~~~v~v~~~--------~g~l~~~d~~tG~~~W~~~~ 171 (376)
T 3q7m_A 112 KAQVYALNTSDGTVAWQTKVA-----GE-ALSRPVVSDGLVLIHTS--------NGQLQALNEADGAVKWTVNL 171 (376)
T ss_dssp TSEEEEEETTTCCEEEEEECS-----SC-CCSCCEEETTEEEEECT--------TSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEEECCCCCEEEEEeCC-----Cc-eEcCCEEECCEEEEEcC--------CCeEEEEECCCCcEEEEEeC
Confidence 146899998866 4766421 11 12223455777776421 1268899987664 77543
No 30
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=86.27 E-value=6.4 Score=27.50 Aligned_cols=57 Identities=11% Similarity=-0.115 Sum_probs=34.9
Q ss_pred CcEEEEECCCCeEEeecCCCCCCCCceeeEEEEECCEEEEEcCccCCccceeceeeEEEcCCCcEEEeecC
Q psy8877 85 PDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPH 155 (180)
Q Consensus 85 ~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~ 155 (180)
..+++||+.+.+...... + .+..+.+..-++++++.. ...+++||+++.+++.+...
T Consensus 35 ~~i~~~d~~~~~~~~~~~----~-~~~~~i~~~~dG~l~v~~---------~~~l~~~d~~~g~~~~~~~~ 91 (297)
T 3g4e_A 35 KKVCRWDSFTKQVQRVTM----D-APVSSVALRQSGGYVATI---------GTKFCALNWKEQSAVVLATV 91 (297)
T ss_dssp TEEEEEETTTCCEEEEEC----S-SCEEEEEEBTTSSEEEEE---------TTEEEEEETTTTEEEEEEEC
T ss_pred CEEEEEECCCCcEEEEeC----C-CceEEEEECCCCCEEEEE---------CCeEEEEECCCCcEEEEEec
Confidence 568999998876655432 1 122222222356766642 13688999999988877654
No 31
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=86.22 E-value=7.3 Score=27.76 Aligned_cols=99 Identities=14% Similarity=0.119 Sum_probs=56.6
Q ss_pred eeeEEEECCEEEEEcCCCCCCCcccCCCceecCcEEEEECCCCeEE-eecCCCCCCCCceeeEEEEECCEEEEEcCccCC
Q psy8877 53 FHTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWI-RPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGL 131 (180)
Q Consensus 53 ~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~w~-~~~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~ 131 (180)
...++..++++|+.... .+.+.++|+.+.+-. +++. ...++ +.++.-++++|+....
T Consensus 46 ~~~i~~~~~~lyv~~~~--------------~~~v~viD~~t~~~~~~i~~---~~~p~--~i~~~~~g~lyv~~~~--- 103 (328)
T 3dsm_A 46 AQSMVIRDGIGWIVVNN--------------SHVIFAIDINTFKEVGRITG---FTSPR--YIHFLSDEKAYVTQIW--- 103 (328)
T ss_dssp EEEEEEETTEEEEEEGG--------------GTEEEEEETTTCCEEEEEEC---CSSEE--EEEEEETTEEEEEEBS---
T ss_pred ceEEEEECCEEEEEEcC--------------CCEEEEEECcccEEEEEcCC---CCCCc--EEEEeCCCeEEEEECC---
Confidence 34566678999998631 366899999988763 3421 22232 2233367899887532
Q ss_pred ccceeceeeEEEcCCCcEEEeecCCCCC-CCCcceeEEEECCEEEEE
Q psy8877 132 VEEHYNDIYRYCTRRQEWARVIPHGAPP-TKRRRQSCIIKGDTLIMF 177 (180)
Q Consensus 132 ~~~~~~~~~~~d~~~~~W~~~~~~~~~~-~~r~~~~~~~~~~~i~~~ 177 (180)
...+.++|+++.+-...-..+... ....-..++..++++|+.
T Consensus 104 ----~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~ 146 (328)
T 3dsm_A 104 ----DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVN 146 (328)
T ss_dssp ----CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEE
T ss_pred ----CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEE
Confidence 247899999988765432222100 000112233356777775
No 32
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=78.11 E-value=21 Score=28.86 Aligned_cols=83 Identities=5% Similarity=-0.024 Sum_probs=45.3
Q ss_pred CcEEEEECCCCeEEeecCCCCCCCCceeeEEEE-ECCEEEEEcCccCCccceecee-eEEEcCCCcEEEeecCCCCCCCC
Q psy8877 85 PDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFV-YGDGLYIFGGYNGLVEEHYNDI-YRYCTRRQEWARVIPHGAPPTKR 162 (180)
Q Consensus 85 ~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~-~~~d~~~~~W~~~~~~~~~~~~r 162 (180)
..+++||+.+.+++.......++..... +.+. -++.|++... ..+ .+||+.+++++........|...
T Consensus 515 ~Gl~~~~~~~~~~~~~~~~~~l~~~~i~-~i~~d~~g~lWi~T~---------~Glv~~~d~~~~~~~~~~~~~gl~~~~ 584 (781)
T 3v9f_A 515 GGVGIYTPDMQLVRKFNQYEGFCSNTIN-QIYRSSKGQMWLATG---------EGLVCFPSARNFDYQVFQRKEGLPNTH 584 (781)
T ss_dssp SCEEEECTTCCEEEEECTTTTCSCSCEE-EEEECTTSCEEEEET---------TEEEEESCTTTCCCEEECGGGTCSCCC
T ss_pred CCEEEEeCCCCeEEEccCCCCCCCCeeE-EEEECCCCCEEEEEC---------CCceEEECCCCCcEEEccccCCCCCce
Confidence 3488999999998887542223333222 2222 2467777421 246 88899888888775432223222
Q ss_pred cceeEEEE-CCEEEEEc
Q psy8877 163 RRQSCIIK-GDTLIMFG 178 (180)
Q Consensus 163 ~~~~~~~~-~~~i~~~G 178 (180)
. .+++.- +++|++.+
T Consensus 585 i-~~i~~d~~g~lW~~t 600 (781)
T 3v9f_A 585 I-RAISEDKNGNIWAST 600 (781)
T ss_dssp C-CEEEECSSSCEEEEC
T ss_pred E-EEEEECCCCCEEEEc
Confidence 2 222222 45666543
No 33
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=77.89 E-value=20 Score=29.08 Aligned_cols=82 Identities=11% Similarity=0.025 Sum_probs=46.5
Q ss_pred cEEEEECCCCeEEeecCCCCCCCCceeeEEEEE-CCEEEEEcCccCCccceeceeeEEEcCCCcEEEeecCCCCCCCCcc
Q psy8877 86 DLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVY-GDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPHGAPPTKRRR 164 (180)
Q Consensus 86 ~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~r~~ 164 (180)
.+++||+.+.++........+|.... .+.+.. ++.+++.+ ...+.+||+++.++.......-.+...+.
T Consensus 563 Gl~~~d~~~~~~~~~~~~~gl~~~~i-~~i~~d~~g~lWi~t---------~~Gl~~~~~~~~~~~~~~~~dGl~~~~f~ 632 (795)
T 4a2l_A 563 GFYCFNEKDKQIKRYNTTNGLPNNVV-YGILEDSFGRLWLST---------NRGISCFNPETEKFRNFTESDGLQSNQFN 632 (795)
T ss_dssp CEEEEETTTTEEEEECGGGTCSCSCE-EEEEECTTSCEEEEE---------TTEEEEEETTTTEEEEECGGGTCSCSCEE
T ss_pred CceeECCCCCcEEEeCCCCCCchhhe-EEEEECCCCCEEEEc---------CCceEEEcCCCCcEEEcCCcCCCccccCc
Confidence 47788888888887653323444332 222222 46777753 13688999999999877654323333332
Q ss_pred e-eEEEE-CCEEEEE
Q psy8877 165 Q-SCIIK-GDTLIMF 177 (180)
Q Consensus 165 ~-~~~~~-~~~i~~~ 177 (180)
. ++... +++|++-
T Consensus 633 ~~~~~~~~~G~l~~g 647 (795)
T 4a2l_A 633 TASYCRTSVGQMYFG 647 (795)
T ss_dssp EEEEEECTTSCEEEE
T ss_pred cCceeECCCCeEEEe
Confidence 2 33333 4565543
No 34
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=77.17 E-value=19 Score=29.17 Aligned_cols=81 Identities=9% Similarity=0.062 Sum_probs=46.3
Q ss_pred cE-EEEECCCCeEEeecCCCCCCCCceeeEEEEE-CCEEEEEcCccCCccceeceeeEEEcCCCcEEEeecCCCCCCCCc
Q psy8877 86 DL-VYLDLKYFTWIRPNTTGSVPVGRRSHSAFVY-GDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPHGAPPTKRR 163 (180)
Q Consensus 86 ~~-~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~r~ 163 (180)
.+ .+||+.+.++........+|..... +++.. ++.|++.+ ...+.+||+++.++.......-.+...+
T Consensus 559 Glv~~~d~~~~~~~~~~~~~gl~~~~i~-~i~~d~~g~lW~~t---------~~Gl~~~~~~~~~~~~~~~~dGl~~~~f 628 (781)
T 3v9f_A 559 GLVCFPSARNFDYQVFQRKEGLPNTHIR-AISEDKNGNIWAST---------NTGISCYITSKKCFYTYDHSNNIPQGSF 628 (781)
T ss_dssp EEEEESCTTTCCCEEECGGGTCSCCCCC-EEEECSSSCEEEEC---------SSCEEEEETTTTEEEEECGGGTCCSSCE
T ss_pred CceEEECCCCCcEEEccccCCCCCceEE-EEEECCCCCEEEEc---------CCceEEEECCCCceEEecccCCcccccc
Confidence 35 7888888888776543334443332 33332 46777753 1258899999999988765432333333
Q ss_pred ce-eEEEE-CCEEEE
Q psy8877 164 RQ-SCIIK-GDTLIM 176 (180)
Q Consensus 164 ~~-~~~~~-~~~i~~ 176 (180)
.. ++... +++|++
T Consensus 629 ~~~~~~~~~~G~l~~ 643 (781)
T 3v9f_A 629 ISGCVTKDHNGLIYF 643 (781)
T ss_dssp EEEEEEECTTSCEEE
T ss_pred ccCceEECCCCEEEE
Confidence 22 33333 455554
No 35
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=73.29 E-value=17 Score=24.07 Aligned_cols=75 Identities=11% Similarity=0.233 Sum_probs=40.0
Q ss_pred CCCcceeeeEEEE-CCEEEEEcCCCCCCCcccCCCceecCcEEEEECCCCeEEe-----ecCCCCCCCCceeeEEEEE-C
Q psy8877 47 PPSYRDFHTANII-DGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIR-----PNTTGSVPVGRRSHSAFVY-G 119 (180)
Q Consensus 47 ~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~w~~-----~~~~~~~~~~r~~~~~~~~-~ 119 (180)
+|......+.... ++++|+|-| +..|+||..+++-.. +..-..+|. .-.++... +
T Consensus 95 lP~~~IDAA~~~~~~g~~yfFkG----------------~~yw~yd~~~~~v~~gyPk~i~~~~gip~--~idaAf~~~~ 156 (196)
T 3c7x_A 95 LPTDKIDAALFWMPNGKTYFFRG----------------NKYYRFNEELRAVDSEYPKNIKVWEGIPE--SPRGSFMGSD 156 (196)
T ss_dssp CCSSCCSEEEEETTTTEEEEEET----------------TEEEEEETTTTEECTTCSEEGGGSBTCCS--SCSEEEECTT
T ss_pred CCCCcccEEEEEccCCEEEEEEC----------------CEEEEEeCCcccccCCCCccHHHCCCcCC--CcceeEEecC
Confidence 4433344333322 579999965 346889887664322 111011222 22334444 3
Q ss_pred C-EEEEEcCccCCccceeceeeEEEcCCCc
Q psy8877 120 D-GLYIFGGYNGLVEEHYNDIYRYCTRRQE 148 (180)
Q Consensus 120 ~-~i~v~GG~~~~~~~~~~~~~~~d~~~~~ 148 (180)
+ ++|.|-|. ..|+||..+.+
T Consensus 157 ~~~~YfFkg~---------~y~r~d~~~~~ 177 (196)
T 3c7x_A 157 EVFTYFYKGN---------KYWKFNNQKLK 177 (196)
T ss_dssp SSEEEEEETT---------EEEEEETTTTE
T ss_pred CCEEEEEECC---------EEEEEECCcce
Confidence 4 78888543 57889877654
No 36
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=68.59 E-value=23 Score=23.48 Aligned_cols=137 Identities=10% Similarity=0.059 Sum_probs=64.7
Q ss_pred CeeEEEeCCEEEEEcccc-----CCC--CCceeeecC---CCCCCcceeeeEEE-ECCEEEEEcCCCCCCCcccCCCcee
Q psy8877 15 NHAAVLNDNKIFTFGGYC-----SGE--DYVKRRPMD---GEPPSYRDFHTANI-IDGRMYIWGGRGDESSLYHSGSEVY 83 (180)
Q Consensus 15 ~~~~~~~~~~iy~~GG~~-----~~~--~~~~~~~~~---~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~ 83 (180)
.-+++.+++++|+|=|.. ... ....-..+. ..+|.. ..++... .++++|+|-|
T Consensus 9 fDAi~~~~g~~yfFkg~~~Wr~~~~~~~~~~~p~~Is~~w~glP~~-IDAa~~~~~~~~~yfFkG--------------- 72 (195)
T 1itv_A 9 FDAIAEIGNQLYLFKDGKYWRFSEGRGSRPQGPFLIADKWPALPRK-LDSVFEEPLSKKLFFFSG--------------- 72 (195)
T ss_dssp CSEEEEETTEEEEEETTEEEEECCSSSCCCEEEEEHHHHCTTSCSS-CSEEEECTTTCCEEEEET---------------
T ss_pred CCEEEEeCCEEEEEECCEEEEEECCccccCCCcEEhhhccCCCCCC-ccEEEEECCCCeEEEEeC---------------
Confidence 345666889999998821 111 111111111 445542 2222221 2578999976
Q ss_pred cCcEEEEECCCCeE-EeecCCCCCCCC--ceeeEEEEECCEEEEEcCccCCccceeceeeEEEcCCCcEEE-----eecC
Q psy8877 84 CPDLVYLDLKYFTW-IRPNTTGSVPVG--RRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWAR-----VIPH 155 (180)
Q Consensus 84 ~~~~~~~d~~~~~w-~~~~~~~~~~~~--r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~W~~-----~~~~ 155 (180)
+..|+|+..+..- ..+..-| +|.. ...++....++++|+|-|. ..|+||..+++-.. +...
T Consensus 73 -~~yw~~~~~~~~~Pk~i~~~G-~p~~~~~iDAA~~~~~g~~yfFkg~---------~ywr~d~~~~~~~~gyPr~i~~~ 141 (195)
T 1itv_A 73 -RQVWVYTGASVLGPRRLDKLG-LGADVAQVTGALRSGRGKMLLFSGR---------RLWRFDVKAQMVDPRSASEVDRM 141 (195)
T ss_dssp -TEEEEEETTEEEEEEEGGGGT-CCTTCCCCCEEEECSTTEEEEEETT---------EEEEEETTTTEECGGGCEEHHHH
T ss_pred -CEEEEEcCCccCCCEEeeecc-cCCCccceeEEEEcCCCeEEEEeCC---------EEEEEeCCcccccCCCccChhhc
Confidence 3356666432211 1122112 3321 2232222235789998552 57889876653221 1000
Q ss_pred CCCCCCCcceeEEEECCEEEEEcC
Q psy8877 156 GAPPTKRRRQSCIIKGDTLIMFGG 179 (180)
Q Consensus 156 ~~~~~~r~~~~~~~~~~~i~~~GG 179 (180)
-+-.+....++...++.+|+|-|
T Consensus 142 -w~Gvp~~idaa~~~~g~~Yffkg 164 (195)
T 1itv_A 142 -FPGVPLDTHDVFQFREKAYFCQD 164 (195)
T ss_dssp -STTSCSSCSEEEEETTEEEEEET
T ss_pred -CCCCCCCCCEEEEeCCeEEEEeC
Confidence 00012223345556788988866
No 37
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=68.19 E-value=25 Score=23.78 Aligned_cols=107 Identities=16% Similarity=0.234 Sum_probs=52.0
Q ss_pred CeeEEEeCCEEEEEccc-----cCCC-CCceeeecC---CCCCCcceeeeEEE-ECCEEEEEcCCCCCCCcccCCCceec
Q psy8877 15 NHAAVLNDNKIFTFGGY-----CSGE-DYVKRRPMD---GEPPSYRDFHTANI-IDGRMYIWGGRGDESSLYHSGSEVYC 84 (180)
Q Consensus 15 ~~~~~~~~~~iy~~GG~-----~~~~-~~~~~~~~~---~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~ 84 (180)
.-++..+.+++|+|-|. .... ....-..+. ..+|. ...++... .++++|+|-|
T Consensus 33 ~DAi~~~~g~~~fFkg~~~Wr~~~~~~~~~~P~~I~~~wp~lp~-~IDAA~~~~~~~k~yfFkG---------------- 95 (218)
T 1gen_A 33 FDGIAQIRGEIFFFKDRFIWRTVTPRDKPMGPLLVATFWPELPE-KIDAVYEAPQEEKAVFFAG---------------- 95 (218)
T ss_dssp CSEEEEETTEEEEEETTEEEEESSTTSCCEEEEEGGGTCTTSCS-CCSEEEEETTTTEEEEEET----------------
T ss_pred EeEEEeCCCcEEEEECCEEEEEeCCCCccCCCEEHHHhcCCCCC-CccEEEEECCCCEEEEEeC----------------
Confidence 34566678999999872 1111 111111111 34443 33333322 2579999965
Q ss_pred CcEEEEECCCCe---EEeecCCCCCCCC-ceeeEEEEE--CCEEEEEcCccCCccceeceeeEEEcCCCc
Q psy8877 85 PDLVYLDLKYFT---WIRPNTTGSVPVG-RRSHSAFVY--GDGLYIFGGYNGLVEEHYNDIYRYCTRRQE 148 (180)
Q Consensus 85 ~~~~~~d~~~~~---w~~~~~~~~~~~~-r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~ 148 (180)
+..|+|+..+.. =..+...| .|.. ..-.++... ++++|+|-|. ..|+||..+++
T Consensus 96 ~~yW~y~~~~~~~gyPk~I~~~g-~p~~~~~IDAAf~~~~~g~~YfFkG~---------~ywr~d~~~~~ 155 (218)
T 1gen_A 96 NEYWIYSASTLERGYPKPLTSLG-LPPDVQRVDAAFNWSKNKKTYIFAGD---------KFWRYNEVKKK 155 (218)
T ss_dssp TEEEEEETTEECTTCSEEGGGGT-CCTTCCCCSEEEEETTTTEEEEEETT---------EEEEEETTTTE
T ss_pred CEEEEEcCccccCCCCccHhhcC-CCCCcCCccEEEEEcCCCeEEEEECC---------EEEEEECcccc
Confidence 346788742110 01111111 2221 122334443 5889998543 57888876653
No 38
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=64.80 E-value=34 Score=24.08 Aligned_cols=62 Identities=8% Similarity=0.229 Sum_probs=34.0
Q ss_pred CcEEEEECCCCeEEeecCCCCCCCCceeeEEEEECCEEEEEcCccCCccceeceeeEEEcCCCcEEEeec
Q psy8877 85 PDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIP 154 (180)
Q Consensus 85 ~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~ 154 (180)
..+..||..+.++..+....... ......+..-++++++.|+.+. .+..||+.+.++.....
T Consensus 30 ~~v~i~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~~~~~dg-------~i~vwd~~~~~~~~~~~ 91 (372)
T 1k8k_C 30 HEVHIYEKSGNKWVQVHELKEHN-GQVTGVDWAPDSNRIVTCGTDR-------NAYVWTLKGRTWKPTLV 91 (372)
T ss_dssp SEEEEEEEETTEEEEEEEEECCS-SCEEEEEEETTTTEEEEEETTS-------CEEEEEEETTEEEEEEE
T ss_pred CEEEEEeCCCCcEEeeeeecCCC-CcccEEEEeCCCCEEEEEcCCC-------eEEEEECCCCeeeeeEE
Confidence 45788888888765543211111 1112122222566777765433 47778888887765543
No 39
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=63.73 E-value=49 Score=25.58 Aligned_cols=58 Identities=7% Similarity=0.051 Sum_probs=30.0
Q ss_pred CcEEEEECCCCeE---EeecCCCCCCCCceeeEEEEE-CCEEEEEcCccCCccceeceeeEEEcCCCcEEEeec
Q psy8877 85 PDLVYLDLKYFTW---IRPNTTGSVPVGRRSHSAFVY-GDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIP 154 (180)
Q Consensus 85 ~~~~~~d~~~~~w---~~~~~~~~~~~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~ 154 (180)
..++.+|..+.+- ..+.. .+.-+..+.. +++.++..... .+.+..+|+.+.+....-.
T Consensus 302 g~i~vvd~~~~~~l~~~~i~~------~~~~~~~~~spdg~~l~va~~~------~~~v~v~D~~tg~l~~~i~ 363 (543)
T 1nir_A 302 GKVLLVNYKDIDNLTVTSIGA------APFLHDGGWDSSHRYFMTAANN------SNKVAVIDSKDRRLSALVD 363 (543)
T ss_dssp TEEEEEECTTSSSCEEEEEEC------CSSCCCEEECTTSCEEEEEEGG------GTEEEEEETTTTEEEEEEE
T ss_pred CeEEEEEecCCCcceeEEecc------CcCccCceECCCCCEEEEEecC------CCeEEEEECCCCeEEEeec
Confidence 5678888776432 12221 2222223332 45544433322 2367789999887766444
No 40
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=61.49 E-value=33 Score=22.93 Aligned_cols=56 Identities=9% Similarity=-0.053 Sum_probs=27.5
Q ss_pred CcEEEEECCCCeEEeecCCCCCCCCceeeEEEEE-CCEEEEEcCccCCccceeceeeEEEcCCCcEEEe
Q psy8877 85 PDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVY-GDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARV 152 (180)
Q Consensus 85 ~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~W~~~ 152 (180)
..+.++|..+........ .....+ +.++.. ++++|+... . ..+.+||+.......+
T Consensus 46 ~~i~~~~~~~~~~~~~~~-~~~~~p---~~i~~~~~g~l~v~~~--~------~~i~~~d~~~~~~~~~ 102 (270)
T 1rwi_B 46 GRVVKLATGSTGTTVLPF-NGLYQP---QGLAVDGAGTVYVTDF--N------NRVVTLAAGSNNQTVL 102 (270)
T ss_dssp CEEEEECC-----EECCC-CSCCSC---CCEEECTTCCEEEEET--T------TEEEEECTTCSCCEEC
T ss_pred CcEEEecCCCcccceEee-CCcCCc---ceeEECCCCCEEEEcC--C------CEEEEEeCCCceEeee
Confidence 457888877766544322 111111 223333 567887643 2 2688888877665544
No 41
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=61.25 E-value=46 Score=24.41 Aligned_cols=67 Identities=19% Similarity=0.214 Sum_probs=39.1
Q ss_pred ECCEEEEEcCCCCCCCcccCCCceecCcEEEEECCCCeEEeecCCCCCCCCceeeEEEEECCEEEEEcCccCCccceece
Q psy8877 59 IDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYND 138 (180)
Q Consensus 59 ~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~ 138 (180)
.++..++.|+.+ ..+..+|..+.+-...-. + .. . .-.+...++.+++.|+.+. .
T Consensus 141 ~d~~~l~~g~~d--------------g~i~iwd~~~~~~~~~~~-~-h~-~--~v~~l~~~~~~l~sg~~dg-------~ 194 (435)
T 1p22_A 141 YDDQKIVSGLRD--------------NTIKIWDKNTLECKRILT-G-HT-G--SVLCLQYDERVIITGSSDS-------T 194 (435)
T ss_dssp CCSSEEEEEESS--------------SCEEEEESSSCCEEEEEC-C-CS-S--CEEEEECCSSEEEEEETTS-------C
T ss_pred ECCCEEEEEeCC--------------CeEEEEeCCCCeEEEEEc-C-CC-C--cEEEEEECCCEEEEEcCCC-------e
Confidence 466777776543 457888988776544321 1 11 1 1123344777777776544 5
Q ss_pred eeEEEcCCCcEEE
Q psy8877 139 IYRYCTRRQEWAR 151 (180)
Q Consensus 139 ~~~~d~~~~~W~~ 151 (180)
+..||+.+.+...
T Consensus 195 i~vwd~~~~~~~~ 207 (435)
T 1p22_A 195 VRVWDVNTGEMLN 207 (435)
T ss_dssp EEEEESSSCCEEE
T ss_pred EEEEECCCCcEEE
Confidence 7788887765543
No 42
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=61.10 E-value=34 Score=22.89 Aligned_cols=52 Identities=17% Similarity=0.323 Sum_probs=27.5
Q ss_pred CCEEEEEcCccCCccceeceeeEEEcCCCcEEEeecCC----CCCCCCcceeEEEECCEEEEEcC
Q psy8877 119 GDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPHG----APPTKRRRQSCIIKGDTLIMFGG 179 (180)
Q Consensus 119 ~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~----~~~~~r~~~~~~~~~~~i~~~GG 179 (180)
++++|+|-|. ..|+||..+++-..--+.. -+-.+..-.++...++.+|+|-|
T Consensus 127 ~gk~yfFkG~---------~ywr~d~~~~~~d~gyPr~i~~~~~Gip~~iDaAf~~~g~~YfFkg 182 (207)
T 1pex_A 127 TGKTLLFSGN---------QVWRYDDTNHIMDKDYPRLIEEDFPGIGDKVDAVYEKNGYIYFFNG 182 (207)
T ss_dssp TSEEEEEETT---------EEEEEETTTTEECSSCCCBHHHHSTTSCSCCSEEEEETTEEEEEET
T ss_pred CCEEEEEeCC---------EEEEEeCcCccccCCCCccHHHcCCCCCCCccEEEEcCCcEEEEEC
Confidence 4789998552 5789987665322110000 00012222344456889998866
No 43
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=60.36 E-value=44 Score=23.92 Aligned_cols=91 Identities=10% Similarity=0.114 Sum_probs=50.5
Q ss_pred eEEEECCEEEEEcCCCCCCCcccCCCceecCcEEEEECCCCe--EEeecCCCCCCCCceeeEEEEECCEEEEEcCccCCc
Q psy8877 55 TANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFT--WIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLV 132 (180)
Q Consensus 55 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~--w~~~~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~ 132 (180)
..+..++.||+... ...++.+|..+.+ |+.-. .+ .+.....+..++.+|+...
T Consensus 272 ~~~~~~~~l~~~~~---------------~g~l~~~d~~tG~~~w~~~~----~~-~~~~~~~~~~~~~l~v~~~----- 326 (376)
T 3q7m_A 272 DFIVDGNRIYLVDQ---------------NDRVMALTIDGGVTLWTQSD----LL-HRLLTSPVLYNGNLVVGDS----- 326 (376)
T ss_dssp EEEEETTEEEEEET---------------TCCEEEEETTTCCEEEEECT----TT-TSCCCCCEEETTEEEEECT-----
T ss_pred CceEECCEEEEEcC---------------CCeEEEEECCCCcEEEeecc----cC-CCcccCCEEECCEEEEEeC-----
Confidence 34556788888742 1458899988764 76531 11 1222234456788877521
Q ss_pred cceeceeeEEEcCCCc--EEEeecCCCCCCCCcceeEEEECCEEEEEc
Q psy8877 133 EEHYNDIYRYCTRRQE--WARVIPHGAPPTKRRRQSCIIKGDTLIMFG 178 (180)
Q Consensus 133 ~~~~~~~~~~d~~~~~--W~~~~~~~~~~~~r~~~~~~~~~~~i~~~G 178 (180)
...++.+|+.+.+ |+.-.. ......+.+..++.||+..
T Consensus 327 ---~g~l~~~d~~tG~~~~~~~~~-----~~~~~~~~~~~~~~l~v~~ 366 (376)
T 3q7m_A 327 ---EGYLHWINVEDGRFVAQQKVD-----SSGFQTEPVAADGKLLIQA 366 (376)
T ss_dssp ---TSEEEEEETTTCCEEEEEECC-----TTCBCSCCEEETTEEEEEB
T ss_pred ---CCeEEEEECCCCcEEEEEecC-----CCcceeCCEEECCEEEEEe
Confidence 1268899988775 443211 1122223344577777653
No 44
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=59.62 E-value=69 Score=25.95 Aligned_cols=60 Identities=7% Similarity=0.067 Sum_probs=33.9
Q ss_pred CcEEEEECCCCeEEeecC---CCCCCCCceeeEEEE-ECCEEEEEcCccCCccceeceeeEEEcCCCcEEEeecC
Q psy8877 85 PDLVYLDLKYFTWIRPNT---TGSVPVGRRSHSAFV-YGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPH 155 (180)
Q Consensus 85 ~~~~~~d~~~~~w~~~~~---~~~~~~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~ 155 (180)
..+++||+.+.++ .... ...++.... .+.+. -++.+++.. ...+++||+.+++++.....
T Consensus 517 ~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i-~~i~~d~~g~lWigT---------~~Gl~~~d~~~~~~~~~~~~ 580 (795)
T 4a2l_A 517 EGLSVFKQEGLDI-QKASILPVSNVTKLFT-NCIYEASNGIIWVGT---------REGFYCFNEKDKQIKRYNTT 580 (795)
T ss_dssp SCEEEEEEETTEE-EECCCSCSCGGGGSCE-EEEEECTTSCEEEEE---------SSCEEEEETTTTEEEEECGG
T ss_pred CceEEEeCCCCeE-EEecCCCCCCCCCCee-EEEEECCCCCEEEEe---------CCCceeECCCCCcEEEeCCC
Confidence 3478899888888 5431 111121111 12222 246777732 12588999999998887543
No 45
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=59.04 E-value=39 Score=23.18 Aligned_cols=56 Identities=9% Similarity=-0.026 Sum_probs=33.3
Q ss_pred CcEEEEECCCCeEEeecCCCCCCCCceeeEEEE-ECCEEEEEcCccCCccceeceeeEEEcCCCcEEEee
Q psy8877 85 PDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFV-YGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVI 153 (180)
Q Consensus 85 ~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~W~~~~ 153 (180)
..+++||+.+. ...+.. +.... ...+. -++++|+.... ...+.+||+.+.+.+.+.
T Consensus 50 ~~i~~~~~~~~-~~~~~~----~~~~~-~~l~~~~dg~l~v~~~~-------~~~i~~~d~~~g~~~~~~ 106 (296)
T 3e5z_A 50 NRTWAWSDDGQ-LSPEMH----PSHHQ-NGHCLNKQGHLIACSHG-------LRRLERQREPGGEWESIA 106 (296)
T ss_dssp TEEEEEETTSC-EEEEES----SCSSE-EEEEECTTCCEEEEETT-------TTEEEEECSTTCCEEEEE
T ss_pred CEEEEEECCCC-eEEEEC----CCCCc-ceeeECCCCcEEEEecC-------CCeEEEEcCCCCcEEEEe
Confidence 56899999887 555532 11111 22222 25777765321 136889998888877664
No 46
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=58.82 E-value=68 Score=25.61 Aligned_cols=120 Identities=14% Similarity=0.091 Sum_probs=64.0
Q ss_pred CeeEEEeCCEEEEEcccc-----CCCCCceeeecCCCCCCcc--------eeeeEEEECCEEEEEcCCCCCCCcccCCCc
Q psy8877 15 NHAAVLNDNKIFTFGGYC-----SGEDYVKRRPMDGEPPSYR--------DFHTANIIDGRMYIWGGRGDESSLYHSGSE 81 (180)
Q Consensus 15 ~~~~~~~~~~iy~~GG~~-----~~~~~~~~~~~~~~~p~~r--------~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~ 81 (180)
..+.++.+++||+..... ....-+..|.++...+... .....++.++.||+...
T Consensus 59 ~~~P~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------------- 125 (668)
T 1kv9_A 59 EATPLFHDGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL------------- 125 (668)
T ss_dssp CCCCEEETTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT-------------
T ss_pred ccCCEEECCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC-------------
Confidence 445567899999986521 1112245666663322110 12234556788887532
Q ss_pred eecCcEEEEECCCC--eEEeecCCCCCCCCceeeEEEEECCEEEEEcCccCCccceeceeeEEEcCCC--cEEEe
Q psy8877 82 VYCPDLVYLDLKYF--TWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQ--EWARV 152 (180)
Q Consensus 82 ~~~~~~~~~d~~~~--~w~~~~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~d~~~~--~W~~~ 152 (180)
...++.+|.++. .|+.-.. ..........+.++.++++|+-.+... ......++.||+++. .|+.-
T Consensus 126 --dg~l~alD~~tG~~~W~~~~~-~~~~~~~~~~~P~v~~~~v~vg~~~~~--~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 126 --DGRLIALDAKTGKAIWSQQTT-DPAKPYSITGAPRVVKGKVIIGNGGAE--YGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp --TSEEEEEETTTCCEEEEEECS-CTTSSCBCCSCCEEETTEEEECCBCTT--TCCBCEEEEEETTTCCEEEEEE
T ss_pred --CCEEEEEECCCCCEeeeeccC-CCCCcceecCCCEEECCEEEEeCCCCC--cCCCCEEEEEECCCCcEEEEec
Confidence 145889998876 4876431 111111122233456888776322211 123457999998765 57754
No 47
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=57.96 E-value=71 Score=25.61 Aligned_cols=121 Identities=13% Similarity=0.083 Sum_probs=64.0
Q ss_pred CeeEEEeCCEEEEEcccc-----CCCCCceeeecCCCCCCc--------ceeeeEEEECCEEEEEcCCCCCCCcccCCCc
Q psy8877 15 NHAAVLNDNKIFTFGGYC-----SGEDYVKRRPMDGEPPSY--------RDFHTANIIDGRMYIWGGRGDESSLYHSGSE 81 (180)
Q Consensus 15 ~~~~~~~~~~iy~~GG~~-----~~~~~~~~~~~~~~~p~~--------r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~ 81 (180)
..+.++.+++||+..... ....-+..|.++...+.. ....+.+..++.||+...
T Consensus 63 ~~~P~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~------------- 129 (689)
T 1yiq_A 63 EATPIVVDGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL------------- 129 (689)
T ss_dssp CCCCEEETTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-------------
T ss_pred eecCEEECCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc-------------
Confidence 345567899999986521 111224566666332211 011234566788887632
Q ss_pred eecCcEEEEECCCC--eEEeecCCCCCCCCceeeEEEEECCEEEEEcCccCCccceeceeeEEEcCCCc--EEEe
Q psy8877 82 VYCPDLVYLDLKYF--TWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQE--WARV 152 (180)
Q Consensus 82 ~~~~~~~~~d~~~~--~w~~~~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~--W~~~ 152 (180)
...++.+|.++. .|+.-.............+.++.++++|+-.+... ......++.||.++.+ |+.-
T Consensus 130 --dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~--~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 130 --DGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAE--FGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp --TSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTT--TCCBCEEEEEETTTCCEEEEEE
T ss_pred --CCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCc--cCCCCEEEEEECCCCcEEEEec
Confidence 145888998776 47764310101111122233456888876322111 1234579999988764 7754
No 48
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=57.96 E-value=71 Score=25.56 Aligned_cols=122 Identities=13% Similarity=0.096 Sum_probs=64.6
Q ss_pred CeeEEEeCCEEEEEccccC-----CCCCceeeecCCCCCCc--------ceeeeEEEECCEEEEEcCCCCCCCcccCCCc
Q psy8877 15 NHAAVLNDNKIFTFGGYCS-----GEDYVKRRPMDGEPPSY--------RDFHTANIIDGRMYIWGGRGDESSLYHSGSE 81 (180)
Q Consensus 15 ~~~~~~~~~~iy~~GG~~~-----~~~~~~~~~~~~~~p~~--------r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~ 81 (180)
..+.++.+++||+...... ...-+..|.++...+.. ......+..++.||+...
T Consensus 70 ~~~P~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~------------- 136 (677)
T 1kb0_A 70 EATPVVVDGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW------------- 136 (677)
T ss_dssp CCCCEEETTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT-------------
T ss_pred eeCCEEECCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC-------------
Confidence 3455678999999875211 11224566666332211 112345567888887632
Q ss_pred eecCcEEEEECCCCe--EEeecCCCCCCCCceeeEEEEECCEEEEEcCccCCccceeceeeEEEcCCC--cEEEee
Q psy8877 82 VYCPDLVYLDLKYFT--WIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQ--EWARVI 153 (180)
Q Consensus 82 ~~~~~~~~~d~~~~~--w~~~~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~d~~~~--~W~~~~ 153 (180)
...++.+|..+.+ |+.-.............+.++.++++|+..+..+ ......++.||..+. .|+.-.
T Consensus 137 --dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~--~~~~g~v~a~D~~tG~~~W~~~~ 208 (677)
T 1kb0_A 137 --DGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAE--YGVRGYITAYDAETGERKWRWFS 208 (677)
T ss_dssp --TSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTT--TCCBCEEEEEETTTCCEEEEEES
T ss_pred --CCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccc--cCCCCEEEEEECCCCcEEEEecc
Confidence 1458899987664 7764210000001122233456787776432211 123457899998766 476543
No 49
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=57.57 E-value=51 Score=23.82 Aligned_cols=58 Identities=3% Similarity=-0.003 Sum_probs=29.6
Q ss_pred CcEEEEECCCCeEEeecCCCCCCCCceeeEEEE-ECCEEEE-EcCccCCccceeceeeEEEcCCCcEEEee
Q psy8877 85 PDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFV-YGDGLYI-FGGYNGLVEEHYNDIYRYCTRRQEWARVI 153 (180)
Q Consensus 85 ~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~-~~~~i~v-~GG~~~~~~~~~~~~~~~d~~~~~W~~~~ 153 (180)
..+..||..+.+...... ...+ .. +++. -+++.++ .+|..+. .+..||..+.......
T Consensus 284 ~~i~i~d~~~~~~~~~~~---~~~~-v~-~~~~s~~~~~l~~~~g~~dg------~i~v~~~~~~~~~~~~ 343 (401)
T 4aez_A 284 KQIHFWNAATGARVNTVD---AGSQ-VT-SLIWSPHSKEIMSTHGFPDN------NLSIWSYSSSGLTKQV 343 (401)
T ss_dssp CEEEEEETTTCCEEEEEE---CSSC-EE-EEEECSSSSEEEEEECTTTC------EEEEEEEETTEEEEEE
T ss_pred CEEEEEECCCCCEEEEEe---CCCc-EE-EEEECCCCCeEEEEeecCCC------cEEEEecCCccceeEE
Confidence 568888988776444321 1111 11 2222 2444444 4354433 5777887776666554
No 50
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=55.35 E-value=52 Score=23.25 Aligned_cols=73 Identities=8% Similarity=0.087 Sum_probs=35.4
Q ss_pred CCEEEEEcCCCCCCCcccCCCceecCcEEEEECCCCeEEeecCCCCCCCCceeeEEEEECCEEEEEcCccCCccceecee
Q psy8877 60 DGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDI 139 (180)
Q Consensus 60 ~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~ 139 (180)
++.+++.||.+ ..+.++|.++.+|.................+..-++++++.|+.+. .+
T Consensus 27 ~g~~las~~~D--------------~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~-------~v 85 (345)
T 3fm0_A 27 AGTLLASCGGD--------------RRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA-------TT 85 (345)
T ss_dssp TSSCEEEEETT--------------SCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTS-------CE
T ss_pred CCCEEEEEcCC--------------CeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCC-------cE
Confidence 45666666643 3466778777776532110001111111111122566777766544 35
Q ss_pred eEEEcCCCcEEEee
Q psy8877 140 YRYCTRRQEWARVI 153 (180)
Q Consensus 140 ~~~d~~~~~W~~~~ 153 (180)
..+|..+..++.+.
T Consensus 86 ~iw~~~~~~~~~~~ 99 (345)
T 3fm0_A 86 CIWKKNQDDFECVT 99 (345)
T ss_dssp EEEEECCC-EEEEE
T ss_pred EEEEccCCCeEEEE
Confidence 56666666655443
No 51
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=55.34 E-value=19 Score=26.21 Aligned_cols=58 Identities=16% Similarity=-0.015 Sum_probs=31.9
Q ss_pred CcEEEEECCCCeEEeecCCCCCCCCceeeEEEEE-CCEEEEEcCccCCccceeceeeEEEcCCCcEEEe
Q psy8877 85 PDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVY-GDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARV 152 (180)
Q Consensus 85 ~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~W~~~ 152 (180)
..++++|+++.++..+.. .+....-.+++.. ++++++.++... .+..+|+.+.+....
T Consensus 101 ~~l~~~d~~~~~~~~~~~---~~~~~~~~~~~~s~~~~~~~~~~~~~-------~i~~~d~~~g~~~~~ 159 (433)
T 3bws_A 101 EKLIALDKEGITHRFISR---FKTGFQPKSVRFIDNTRLAIPLLEDE-------GMDVLDINSGQTVRL 159 (433)
T ss_dssp TCEEECCBTTCSEEEEEE---EECSSCBCCCEESSSSEEEEEBTTSS-------SEEEEETTTCCEEEE
T ss_pred eEEEEECCCCCcceEEEE---EcCCCCceEEEEeCCCeEEEEeCCCC-------eEEEEECCCCeEeee
Confidence 368888887665554422 1111111122222 566777654332 588999988877654
No 52
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=54.48 E-value=83 Score=25.30 Aligned_cols=69 Identities=4% Similarity=0.026 Sum_probs=37.0
Q ss_pred CCEEEEEcCCCCCCCcccCCCceecCcEEEEECCCCeEEeecCCCCCCCCceeeEEEEE-CCEEEEEcCccCCccceece
Q psy8877 60 DGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVY-GDGLYIFGGYNGLVEEHYND 138 (180)
Q Consensus 60 ~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~ 138 (180)
++.||+.+|.. ..+++||+.+++++.+... .......-.+.+.. ++.|++-. ...
T Consensus 482 ~g~lWi~~~t~--------------~Gl~~~d~~~~~~~~~~~~-~~~~~~~~~~i~~d~~g~lWigt---------~~G 537 (758)
T 3ott_A 482 EGNVWVLLYNN--------------KGIDKINPRTREVTKLFAD-ELTGEKSPNYLLCDEDGLLWVGF---------HGG 537 (758)
T ss_dssp TSCEEEEETTC--------------SSEEEEETTTTEEEEECTT-TSCGGGCEEEEEECTTSCEEEEE---------TTE
T ss_pred CCCEEEEccCC--------------CCcEEEeCCCCceEEecCC-CcCCCcccceEEECCCCCEEEEe---------cCc
Confidence 45888865542 3488999999999887431 12111111222222 46677632 114
Q ss_pred eeEEEcCCCcEEEe
Q psy8877 139 IYRYCTRRQEWARV 152 (180)
Q Consensus 139 ~~~~d~~~~~W~~~ 152 (180)
+.+||+.+++++..
T Consensus 538 l~~~~~~~~~~~~~ 551 (758)
T 3ott_A 538 VMRINPKDESQQSI 551 (758)
T ss_dssp EEEECC--CCCCBC
T ss_pred eEEEecCCCceEEe
Confidence 66777766665544
No 53
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=54.47 E-value=52 Score=22.90 Aligned_cols=61 Identities=7% Similarity=0.003 Sum_probs=34.2
Q ss_pred CcEEEEECCCCeEEeecCCCCCCCCceeeEEEEE-CCEEEEEcCccCCccceeceeeEEEcCCCcEEEe
Q psy8877 85 PDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVY-GDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARV 152 (180)
Q Consensus 85 ~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~W~~~ 152 (180)
..+++||+++.+...+.. .+.. .-...+.. ++++|+....... ....++++|+++.....+
T Consensus 66 ~~i~~~d~~~~~~~~~~~---~~~~-~~~~i~~~~dg~l~v~~~~~~~---~~~~i~~~d~~~~~~~~~ 127 (333)
T 2dg1_A 66 GNIFKINPETKEIKRPFV---SHKA-NPAAIKIHKDGRLFVCYLGDFK---STGGIFAATENGDNLQDI 127 (333)
T ss_dssp CEEEEECTTTCCEEEEEE---CSSS-SEEEEEECTTSCEEEEECTTSS---SCCEEEEECTTSCSCEEE
T ss_pred CEEEEEeCCCCcEEEEee---CCCC-CcceEEECCCCcEEEEeCCCCC---CCceEEEEeCCCCEEEEE
Confidence 468999999888776531 1111 12223332 5677776432210 123688899888776633
No 54
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=53.97 E-value=61 Score=23.61 Aligned_cols=58 Identities=10% Similarity=0.054 Sum_probs=32.7
Q ss_pred CcEEEEECCCCeEEeecCCCCCCCCceeeEEEE-ECCEEEEEcCccCCccceeceeeEEEcCCCcEEE
Q psy8877 85 PDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFV-YGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWAR 151 (180)
Q Consensus 85 ~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~W~~ 151 (180)
+.++++|..+.+..++-.. ..+ ...-.+++. -++++++.|+.+. .+..||+.+.+-..
T Consensus 125 ~tV~lWd~~tg~~~~~~~~-~~~-~~~V~sv~fspdg~~lasgs~Dg-------~v~iWd~~~~~~~~ 183 (420)
T 4gga_A 125 NSVYLWSASSGDILQLLQM-EQP-GEYISSVAWIKEGNYLAVGTSSA-------EVQLWDVQQQKRLR 183 (420)
T ss_dssp TEEEEEETTTCCEEEEEEC-CST-TCCEEEEEECTTSSEEEEEETTS-------CEEEEETTTTEEEE
T ss_pred CEEEEEECCCCCEEEEEEe-cCC-CCcEEEEEECCCCCEEEEEECCC-------eEEEEEcCCCcEEE
Confidence 5688899988876664321 111 111112222 2567777776543 57788887775543
No 55
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=53.03 E-value=78 Score=25.51 Aligned_cols=62 Identities=10% Similarity=0.082 Sum_probs=34.2
Q ss_pred CcEEEEECCCCeEEeecCCCCCCCCceeeEEEE-EC--CEEEEEcCccCCccceeceeeEEEcCCCcEEEeecC
Q psy8877 85 PDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFV-YG--DGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPH 155 (180)
Q Consensus 85 ~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~-~~--~~i~v~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~ 155 (180)
..+.+||....++..+........+ . .+++. .+ +..++.|+.+. .+..||+.+.+|..+...
T Consensus 31 g~I~vwd~~~~~~~~~~~l~~h~~~-V-~~l~~s~~~~~~~l~s~s~Dg-------~I~vwd~~~~~~~~~~~~ 95 (753)
T 3jro_A 31 KTIKIFEVEGETHKLIDTLTGHEGP-V-WRVDWAHPKFGTILASCSYDG-------KVLIWKEENGRWSQIAVH 95 (753)
T ss_dssp TEEEEEEEETTEEEEEEEECCCSSC-E-EEEEECCTTSCSEEEEEETTS-------CEEEEEEETTEEEEEEEE
T ss_pred CcEEEEecCCCCCccceeccCCcCc-e-EEEEecCCCCCCEEEEEeCCC-------eEEEEECCCCcccccccc
Confidence 3477778776666655321111111 1 12222 23 56777766543 477888888887666554
No 56
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=51.54 E-value=79 Score=24.17 Aligned_cols=49 Identities=22% Similarity=0.222 Sum_probs=31.7
Q ss_pred CCEEEEEcCCCCCCCcccCCCceecCcEEEEECCCCeEEeecCCCCCCCCceeeEEEEECCEEEEEcCc
Q psy8877 60 DGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGY 128 (180)
Q Consensus 60 ~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~i~v~GG~ 128 (180)
++.+|+|-| +..|+||..+++...-.- ..+| . .-++....+++|+|-|.
T Consensus 158 ~~~~yfFkG----------------~~yw~yd~~~~~~~~~~w-~gi~--~-iDAA~~~~g~~YfFkG~ 206 (460)
T 1qhu_A 158 DEGILFFQG----------------NRKWFWDLTTGTKKERSW-PAVG--N-CTSALRWLGRYYCFQGN 206 (460)
T ss_dssp SSEEEEEET----------------TEEEEEETTTTEEEEECC-TTSC--C-CSEEEEETTEEEEEETT
T ss_pred CCeEEEEec----------------ccEEEEecccceeecccC-CCCC--c-cchheeeCCceEEEECC
Confidence 678888876 346899988887654321 1122 2 34555668999998664
No 57
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=51.47 E-value=69 Score=23.50 Aligned_cols=61 Identities=13% Similarity=0.023 Sum_probs=35.0
Q ss_pred CcEEEEECCCCeEEeecCCCCCCCCceeeEEEE-ECCEEEEEcCccCCccceeceeeEEEcCCCcEEEeec
Q psy8877 85 PDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFV-YGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIP 154 (180)
Q Consensus 85 ~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~ 154 (180)
..++++|..+.+..++.. ........+. -+++.+++++.... ...++.+|+.+.+...+..
T Consensus 291 ~~i~~~d~~~~~~~~l~~-----~~~~~~~~~~spdG~~l~~~~~~~g----~~~i~~~d~~~~~~~~l~~ 352 (415)
T 2hqs_A 291 PQVYKVNINGGAPQRITW-----EGSQNQDADVSSDGKFMVMVSSNGG----QQHIAKQDLATGGVQVLSS 352 (415)
T ss_dssp CEEEEEETTSSCCEECCC-----SSSEEEEEEECTTSSEEEEEEECSS----CEEEEEEETTTCCEEECCC
T ss_pred cEEEEEECCCCCEEEEec-----CCCcccCeEECCCCCEEEEEECcCC----ceEEEEEECCCCCEEEecC
Confidence 468888988877555432 1112222222 25665555544321 3478999999888766543
No 58
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=51.40 E-value=93 Score=24.95 Aligned_cols=99 Identities=12% Similarity=0.140 Sum_probs=51.4
Q ss_pred eEEEECCEEEEEcCCCCCCCcccCCCceecCcEEEEECCCC--eEEeecCCCCCCC-----CceeeEEEEECCEEEEEcC
Q psy8877 55 TANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYF--TWIRPNTTGSVPV-----GRRSHSAFVYGDGLYIFGG 127 (180)
Q Consensus 55 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~--~w~~~~~~~~~~~-----~r~~~~~~~~~~~i~v~GG 127 (180)
+-++.++.||+... ...++.+|..+. .|+.-........ .......++.+++||+..
T Consensus 65 ~P~v~~g~vyv~~~---------------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~- 128 (689)
T 1yiq_A 65 TPIVVDGVMYTTGP---------------FSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGV- 128 (689)
T ss_dssp CCEEETTEEEEECG---------------GGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEEC-
T ss_pred cCEEECCEEEEEcC---------------CCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEc-
Confidence 44567889998753 145888898766 4876321000000 001123356688887743
Q ss_pred ccCCccceeceeeEEEcCCC--cEEEeecCCCCCCCCcceeEEEECCEEEE
Q psy8877 128 YNGLVEEHYNDIYRYCTRRQ--EWARVIPHGAPPTKRRRQSCIIKGDTLIM 176 (180)
Q Consensus 128 ~~~~~~~~~~~~~~~d~~~~--~W~~~~~~~~~~~~r~~~~~~~~~~~i~~ 176 (180)
. ...++.+|.++. .|+.-.............+.++.++.+|+
T Consensus 129 ~-------dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~v 172 (689)
T 1yiq_A 129 L-------DGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVI 172 (689)
T ss_dssp T-------TSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEE
T ss_pred c-------CCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEE
Confidence 1 125888898765 57764421100011222233456777665
No 59
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=49.07 E-value=69 Score=22.77 Aligned_cols=58 Identities=12% Similarity=0.074 Sum_probs=32.0
Q ss_pred CcEEEEECCCCeEEeecCCCCCCCCceeeEEEEE-CCE-EEEEcCccCCccceeceeeEEEcCCCcEEEeec
Q psy8877 85 PDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVY-GDG-LYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIP 154 (180)
Q Consensus 85 ~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~-~~~-i~v~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~ 154 (180)
..+.++|+.+.+...... .+. .-..++.. +++ +++.+ ..+ ..+..||+.+.+......
T Consensus 54 ~~i~v~d~~~~~~~~~~~---~~~--~v~~~~~spdg~~l~~~~-~~~------~~v~v~d~~~~~~~~~~~ 113 (391)
T 1l0q_A 54 NDVSIIDTATNNVIATVP---AGS--SPQGVAVSPDGKQVYVTN-MAS------STLSVIDTTSNTVAGTVK 113 (391)
T ss_dssp TEEEEEETTTTEEEEEEE---CSS--SEEEEEECTTSSEEEEEE-TTT------TEEEEEETTTTEEEEEEE
T ss_pred CeEEEEECCCCeEEEEEE---CCC--CccceEECCCCCEEEEEE-CCC------CEEEEEECCCCeEEEEEe
Confidence 568889998887655422 111 11223332 344 54543 322 268899998877655443
No 60
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=48.69 E-value=77 Score=23.25 Aligned_cols=61 Identities=10% Similarity=0.039 Sum_probs=33.6
Q ss_pred CcEEEEECCCCeEEeecCCCCCCCCceeeEEEEECCEEEEEcCccCCccceeceeeEEEcCCCcEEEee
Q psy8877 85 PDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVI 153 (180)
Q Consensus 85 ~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~W~~~~ 153 (180)
..++.+|+.+.+..++.. .+ ......+..-+++.++++..... ...++.+|+.+.+...+.
T Consensus 247 ~~i~~~d~~~~~~~~l~~---~~-~~~~~~~~spdg~~l~~~s~~~g----~~~i~~~d~~~~~~~~l~ 307 (415)
T 2hqs_A 247 LNLYVMDLASGQIRQVTD---GR-SNNTEPTWFPDSQNLAFTSDQAG----RPQVYKVNINGGAPQRIT 307 (415)
T ss_dssp CEEEEEETTTCCEEECCC---CS-SCEEEEEECTTSSEEEEEECTTS----SCEEEEEETTSSCCEECC
T ss_pred ceEEEEECCCCCEEeCcC---CC-CcccceEECCCCCEEEEEECCCC----CcEEEEEECCCCCEEEEe
Confidence 569999999888766632 11 11111111225665555432221 236888998887655543
No 61
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=48.36 E-value=71 Score=22.71 Aligned_cols=58 Identities=10% Similarity=0.014 Sum_probs=32.9
Q ss_pred CcEEEEECCCCeEEeecCCCCCCCCceeeEEEEE-CCE-EEEEcCccCCccceeceeeEEEcCCCcEEEeec
Q psy8877 85 PDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVY-GDG-LYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIP 154 (180)
Q Consensus 85 ~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~-~~~-i~v~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~ 154 (180)
..+.++|+.+.+...... ... .-...+.. +++ +|+.++.. ..+..+|+.+.+......
T Consensus 96 ~~v~v~d~~~~~~~~~~~---~~~--~~~~~~~s~dg~~l~~~~~~~-------~~v~~~d~~~~~~~~~~~ 155 (391)
T 1l0q_A 96 STLSVIDTTSNTVAGTVK---TGK--SPLGLALSPDGKKLYVTNNGD-------KTVSVINTVTKAVINTVS 155 (391)
T ss_dssp TEEEEEETTTTEEEEEEE---CSS--SEEEEEECTTSSEEEEEETTT-------TEEEEEETTTTEEEEEEE
T ss_pred CEEEEEECCCCeEEEEEe---CCC--CcceEEECCCCCEEEEEeCCC-------CEEEEEECCCCcEEEEEe
Confidence 558999999887655422 111 11223332 344 65665432 268889988877665543
No 62
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=47.91 E-value=79 Score=23.16 Aligned_cols=73 Identities=7% Similarity=-0.014 Sum_probs=38.3
Q ss_pred CCEEEEEcCCCCCCCcccCCCceecCcEEEEECCCCeEEeecCCCCCCCCceeeEEEE--ECCEEEEEcCccCCccceec
Q psy8877 60 DGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFV--YGDGLYIFGGYNGLVEEHYN 137 (180)
Q Consensus 60 ~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~~ 137 (180)
++.+++.|+.+ ..|.++|..+..-..+... ......-.+++. .++.+++.|+.+.
T Consensus 131 ~~~~lasGs~d--------------g~i~lWd~~~~~~~~~~~~--~gH~~~V~~l~f~p~~~~~l~s~s~D~------- 187 (435)
T 4e54_B 131 HPSTVAVGSKG--------------GDIMLWNFGIKDKPTFIKG--IGAGGSITGLKFNPLNTNQFYASSMEG------- 187 (435)
T ss_dssp CTTCEEEEETT--------------SCEEEECSSCCSCCEEECC--CSSSCCCCEEEECSSCTTEEEEECSSS-------
T ss_pred CCCEEEEEeCC--------------CEEEEEECCCCCceeEEEc--cCCCCCEEEEEEeCCCCCEEEEEeCCC-------
Confidence 34677777643 3477788776643332110 111111112222 2456777766543
Q ss_pred eeeEEEcCCCcEEEeecC
Q psy8877 138 DIYRYCTRRQEWARVIPH 155 (180)
Q Consensus 138 ~~~~~d~~~~~W~~~~~~ 155 (180)
.+..+|+++.....+...
T Consensus 188 ~v~iwd~~~~~~~~~~~~ 205 (435)
T 4e54_B 188 TTRLQDFKGNILRVFASS 205 (435)
T ss_dssp CEEEEETTSCEEEEEECC
T ss_pred EEEEeeccCCceeEEecc
Confidence 477788888776665543
No 63
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=47.41 E-value=56 Score=25.24 Aligned_cols=63 Identities=17% Similarity=0.170 Sum_probs=34.2
Q ss_pred CcEEEEECCCCeEEeecCCCCCCCCceeeEEEEE-C-CEEEEEcCccCCccceeceeeEEEcCCC-----cEEEeec
Q psy8877 85 PDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVY-G-DGLYIFGGYNGLVEEHYNDIYRYCTRRQ-----EWARVIP 154 (180)
Q Consensus 85 ~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~-~-~~i~v~GG~~~~~~~~~~~~~~~d~~~~-----~W~~~~~ 154 (180)
+.+.++|..+.+-...-..+..|.+-.+.. ... + +.+|+.+...+. .+..+|+.+. .|+.+..
T Consensus 346 ~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~-~~~p~~g~~~~s~~~~d~------~V~v~d~~~~~~~~~~~~~v~~ 415 (543)
T 1nir_A 346 NKVAVIDSKDRRLSALVDVGKTPHPGRGAN-FVHPKYGPVWSTSHLGDG------SISLIGTDPKNHPQYAWKKVAE 415 (543)
T ss_dssp TEEEEEETTTTEEEEEEECSSSBCCTTCEE-EEETTTEEEEEEEBSSSS------EEEEEECCTTTCTTTBTSEEEE
T ss_pred CeEEEEECCCCeEEEeeccCCCCCCCCCcc-cCCCCCccEEEeccCCCc------eEEEEEeCCCCCchhcCeEEEE
Confidence 678889999887655322233444322222 223 2 567776543332 5777777662 2665554
No 64
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=47.20 E-value=1.1e+02 Score=24.46 Aligned_cols=99 Identities=12% Similarity=0.137 Sum_probs=51.4
Q ss_pred eeEEEECCEEEEEcCCCCCCCcccCCCceecCcEEEEECCCC--eEEeecCCCCC-----CCCceeeEEEEECCEEEEEc
Q psy8877 54 HTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYF--TWIRPNTTGSV-----PVGRRSHSAFVYGDGLYIFG 126 (180)
Q Consensus 54 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~--~w~~~~~~~~~-----~~~r~~~~~~~~~~~i~v~G 126 (180)
.+-++.++.||+... ...++.+|..+. .|+.-...... .........++.++++|+..
T Consensus 60 ~~P~v~~g~vyv~~~---------------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~ 124 (668)
T 1kv9_A 60 ATPLFHDGVIYTSMS---------------WSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGT 124 (668)
T ss_dssp CCCEEETTEEEEEEG---------------GGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEEC
T ss_pred cCCEEECCEEEEECC---------------CCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEc
Confidence 344567889998753 245888887766 47763210000 00001123345678887742
Q ss_pred CccCCccceeceeeEEEcCCC--cEEEeecCCCCCCCCcceeEEEECCEEEE
Q psy8877 127 GYNGLVEEHYNDIYRYCTRRQ--EWARVIPHGAPPTKRRRQSCIIKGDTLIM 176 (180)
Q Consensus 127 G~~~~~~~~~~~~~~~d~~~~--~W~~~~~~~~~~~~r~~~~~~~~~~~i~~ 176 (180)
. ...++.+|.++. .|+.-.... ........+.++.++.+|+
T Consensus 125 ~--------dg~l~alD~~tG~~~W~~~~~~~-~~~~~~~~~P~v~~~~v~v 167 (668)
T 1kv9_A 125 L--------DGRLIALDAKTGKAIWSQQTTDP-AKPYSITGAPRVVKGKVII 167 (668)
T ss_dssp T--------TSEEEEEETTTCCEEEEEECSCT-TSSCBCCSCCEEETTEEEE
T ss_pred C--------CCEEEEEECCCCCEeeeeccCCC-CCcceecCCCEEECCEEEE
Confidence 1 136888998765 577643211 0111122233445777665
No 65
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=46.12 E-value=75 Score=22.35 Aligned_cols=56 Identities=14% Similarity=-0.034 Sum_probs=35.3
Q ss_pred CcEEEEECCCCeEEeecCCCCCCCCceeeEEEEECCEEEEEcCccCCccceeceeeEEEcCCCcEEEeec
Q psy8877 85 PDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIP 154 (180)
Q Consensus 85 ~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~ 154 (180)
..+++||+.+.+...... +. .....+..-++++++.. . ..++++|+.+.+.+.+..
T Consensus 71 ~~i~~~d~~~~~~~~~~~----~~-~v~~i~~~~dg~l~v~~---~------~gl~~~d~~~g~~~~~~~ 126 (326)
T 2ghs_A 71 RELHELHLASGRKTVHAL----PF-MGSALAKISDSKQLIAS---D------DGLFLRDTATGVLTLHAE 126 (326)
T ss_dssp TEEEEEETTTTEEEEEEC----SS-CEEEEEEEETTEEEEEE---T------TEEEEEETTTCCEEEEEC
T ss_pred CEEEEEECCCCcEEEEEC----CC-cceEEEEeCCCeEEEEE---C------CCEEEEECCCCcEEEEee
Confidence 568999998887665532 21 12222223467877753 1 258999998888877654
No 66
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=45.75 E-value=75 Score=22.22 Aligned_cols=62 Identities=11% Similarity=0.132 Sum_probs=33.2
Q ss_pred CcEEEEECCCCeEEeecCCCCCCCCceeeEEEEE-C--CEEEEEcCccCCccceeceeeEEEcCCCcEEEeecC
Q psy8877 85 PDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVY-G--DGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPH 155 (180)
Q Consensus 85 ~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~-~--~~i~v~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~ 155 (180)
..+.+||....++..+...... .... .+++.. + +.+++.|+.+. .+..||+.+.+|..+...
T Consensus 33 g~i~iw~~~~~~~~~~~~~~~h-~~~v-~~~~~~~~~~~~~l~s~~~dg-------~v~iwd~~~~~~~~~~~~ 97 (379)
T 3jrp_A 33 KTIKIFEVEGETHKLIDTLTGH-EGPV-WRVDWAHPKFGTILASCSYDG-------KVLIWKEENGRWSQIAVH 97 (379)
T ss_dssp SCEEEEEEETTEEEEEEEECCC-SSCE-EEEEECCGGGCSEEEEEETTS-------CEEEEEEETTEEEEEEEE
T ss_pred CcEEEEecCCCcceeeeEecCC-CCcE-EEEEeCCCCCCCEEEEeccCC-------EEEEEEcCCCceeEeeee
Confidence 3467778776666554321111 1111 122222 2 56777766543 477888888887766554
No 67
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=45.41 E-value=1.2e+02 Score=24.38 Aligned_cols=16 Identities=19% Similarity=0.185 Sum_probs=12.0
Q ss_pred CeeEEEeCCEEEEEcc
Q psy8877 15 NHAAVLNDNKIFTFGG 30 (180)
Q Consensus 15 ~~~~~~~~~~iy~~GG 30 (180)
.-++..+.+++|+|-|
T Consensus 446 fDAit~~rg~~yfFKg 461 (631)
T 1ck7_A 446 FDGIAQIRGEIFFFKD 461 (631)
T ss_dssp CSEEEECSSSEEEECS
T ss_pred cceeEecCCcEEEEcC
Confidence 3456667888999987
No 68
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=44.35 E-value=82 Score=22.29 Aligned_cols=146 Identities=10% Similarity=0.017 Sum_probs=67.2
Q ss_pred ceEEeccC-CC-CCcCeeEEEeCCEEEEEcccc----CCCCCceeeecCCCCCCcceeeeEEE-ECCEEEEEcCCCCCCC
Q psy8877 2 HWTVHLTG-GP-RRVNHAAVLNDNKIFTFGGYC----SGEDYVKRRPMDGEPPSYRDFHTANI-IDGRMYIWGGRGDESS 74 (180)
Q Consensus 2 ~W~~~~~~-~~-~r~~~~~~~~~~~iy~~GG~~----~~~~~~~~~~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~ 74 (180)
.|+.+... +. .....++...++.+|+.|... ....-..|.......+.+-..+.++. -++.+|+.+..
T Consensus 67 tW~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~g~i~~S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~----- 141 (327)
T 2xbg_A 67 TWEPRTLVLDHSDYRFNSVSFQGNEGWIVGEPPIMLHTTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITNV----- 141 (327)
T ss_dssp SCEECCCCCSCCCCEEEEEEEETTEEEEEEETTEEEEESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEETT-----
T ss_pred CCeECCCCCCCCCccEEEEEecCCeEEEEECCCeEEEECCCCCCceECccccCCCCCeEEEEEECCCCEEEEeCC-----
Confidence 58877432 22 223445566678899886311 00001233333321111112233333 35688887632
Q ss_pred cccCCCceecCcEEEEECCCCeEEeecCCCCCCCCceeeEEEEE-CCEEEEEcCccCCccceeceeeEEEcC-CCcEEEe
Q psy8877 75 LYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVY-GDGLYIFGGYNGLVEEHYNDIYRYCTR-RQEWARV 152 (180)
Q Consensus 75 ~~~~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~~d~~-~~~W~~~ 152 (180)
..+++-+-...+|+++.. .. +...+.++.. +++++++|- .. .+++-+-. -.+|+.+
T Consensus 142 ----------g~v~~S~DgG~tW~~~~~--~~--~~~~~~~~~~~~~~~~~~g~-~G-------~~~~S~d~gG~tW~~~ 199 (327)
T 2xbg_A 142 ----------GAIYRTKDSGKNWQALVQ--EA--IGVMRNLNRSPSGEYVAVSS-RG-------SFYSTWEPGQTAWEPH 199 (327)
T ss_dssp ----------CCEEEESSTTSSEEEEEC--SC--CCCEEEEEECTTSCEEEEET-TS-------SEEEEECTTCSSCEEE
T ss_pred ----------ccEEEEcCCCCCCEEeec--CC--CcceEEEEEcCCCcEEEEEC-CC-------cEEEEeCCCCCceeEC
Confidence 234554334668999863 11 2222333333 456666542 11 24443322 5789988
Q ss_pred ecCCCCCCCCcceeEEEE-CCEEEEEc
Q psy8877 153 IPHGAPPTKRRRQSCIIK-GDTLIMFG 178 (180)
Q Consensus 153 ~~~~~~~~~r~~~~~~~~-~~~i~~~G 178 (180)
... .+...+.+... ++.+++++
T Consensus 200 ~~~----~~~~~~~~~~~~~g~~~~~~ 222 (327)
T 2xbg_A 200 NRT----TSRRLHNMGFTPDGRLWMIV 222 (327)
T ss_dssp ECC----SSSCEEEEEECTTSCEEEEE
T ss_pred CCC----CCCccceeEECCCCCEEEEe
Confidence 543 22333333332 45566554
No 69
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=43.67 E-value=76 Score=21.74 Aligned_cols=58 Identities=5% Similarity=-0.103 Sum_probs=28.6
Q ss_pred CcEEEEECCCCeEEeecCCCCCCCCceeeEEEEECCEEEEEcCccCCccceeceeeEEEcCCCcEEE
Q psy8877 85 PDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWAR 151 (180)
Q Consensus 85 ~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~W~~ 151 (180)
..+..||+.+.+....... .........+..-+++.++.|+.+. .+..||+.+.+-..
T Consensus 171 ~~i~~wd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~d~-------~i~iwd~~~~~~~~ 228 (312)
T 4ery_A 171 GLCRIWDTASGQCLKTLID--DDNPPVSFVKFSPNGKYILAATLDN-------TLKLWDYSKGKCLK 228 (312)
T ss_dssp SCEEEEETTTCCEEEEECC--SSCCCEEEEEECTTSSEEEEEETTT-------EEEEEETTTTEEEE
T ss_pred CcEEEEECCCCceeeEEec--cCCCceEEEEECCCCCEEEEEcCCC-------eEEEEECCCCcEEE
Confidence 3477788877654432110 1111111112222456666655432 57788887765443
No 70
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=43.56 E-value=1.2e+02 Score=24.16 Aligned_cols=76 Identities=12% Similarity=0.165 Sum_probs=43.8
Q ss_pred eeEEEECCEEEEEcCCCCCCCcccCCCceecCcEEEEECCCC--eEEeecCCCCCCC-----CceeeEEEEECCEEEEEc
Q psy8877 54 HTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYF--TWIRPNTTGSVPV-----GRRSHSAFVYGDGLYIFG 126 (180)
Q Consensus 54 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~--~w~~~~~~~~~~~-----~r~~~~~~~~~~~i~v~G 126 (180)
.+.++.++.||+... ...++.+|..+. .|+.-........ .......++.+++||+..
T Consensus 71 ~~P~v~~g~vyv~~~---------------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~ 135 (677)
T 1kb0_A 71 ATPVVVDGIMYVSAS---------------WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGA 135 (677)
T ss_dssp CCCEEETTEEEEECG---------------GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEEC
T ss_pred eCCEEECCEEEEECC---------------CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEc
Confidence 344567899998853 245888998876 4876421100000 011223455788887752
Q ss_pred CccCCccceeceeeEEEcCCC--cEEEe
Q psy8877 127 GYNGLVEEHYNDIYRYCTRRQ--EWARV 152 (180)
Q Consensus 127 G~~~~~~~~~~~~~~~d~~~~--~W~~~ 152 (180)
. ...++.+|.++. .|+.-
T Consensus 136 ~--------dg~l~alD~~tG~~~W~~~ 155 (677)
T 1kb0_A 136 W--------DGRLIALDAATGKEVWHQN 155 (677)
T ss_dssp T--------TSEEEEEETTTCCEEEEEE
T ss_pred C--------CCEEEEEECCCCCEEeeec
Confidence 1 136888998755 57654
No 71
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=43.51 E-value=50 Score=23.12 Aligned_cols=62 Identities=15% Similarity=-0.027 Sum_probs=33.4
Q ss_pred cEEEEECCCCeEEeecCCCCCCCCceeeEEEEECCEEEEEcCccCCccceeceeeEEEcCCCcEEEeec
Q psy8877 86 DLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIP 154 (180)
Q Consensus 86 ~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~ 154 (180)
.++.+|.++.+++.+........+. ..+..-++++|+.+.... ...++.||+.+.+++.+..
T Consensus 19 ~v~~~d~~tg~~~~~~~~~~~~~p~--~~a~spdg~l~~~~~~~~-----~~~v~~~~~~~g~~~~~~~ 80 (347)
T 3hfq_A 19 YQGTLDTTAKTLTNDGLLAATQNPT--YLALSAKDCLYSVDKEDD-----EGGIAAWQIDGQTAHKLNT 80 (347)
T ss_dssp EEEEEETTTTEEEEEEEEEECSCCC--CEEECTTCEEEEEEEETT-----EEEEEEEEEETTEEEEEEE
T ss_pred EEEEEcCCCCeEEEeeeeeccCCcc--eEEEccCCeEEEEEecCC-----CceEEEEEecCCcEEEeee
Confidence 3677788788877653211111121 112223677666542211 2468888888887776654
No 72
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=41.36 E-value=1e+02 Score=22.51 Aligned_cols=55 Identities=15% Similarity=0.179 Sum_probs=29.6
Q ss_pred CcEEEEECCCCeEEeecCCCCCCCCceeeEEEEECCEEEEEcCccCCccceeceeeEEEcCCCcEEE
Q psy8877 85 PDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWAR 151 (180)
Q Consensus 85 ~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~W~~ 151 (180)
..+..+|..+.+-...-. ....+ ..+...++.+++.|+.+. .+..||+.+.+-..
T Consensus 276 g~i~vwd~~~~~~~~~~~--~~~~~---v~~~~~~~~~l~~g~~dg-------~i~iwd~~~~~~~~ 330 (435)
T 1p22_A 276 RTIKVWNTSTCEFVRTLN--GHKRG---IACLQYRDRLVVSGSSDN-------TIRLWDIECGACLR 330 (435)
T ss_dssp SEEEEEETTTCCEEEEEE--CCSSC---EEEEEEETTEEEEEETTS-------CEEEEETTTCCEEE
T ss_pred CeEEEEECCcCcEEEEEc--CCCCc---EEEEEeCCCEEEEEeCCC-------eEEEEECCCCCEEE
Confidence 447788887765443211 11111 123334566667766543 57788887765443
No 73
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=40.84 E-value=81 Score=21.22 Aligned_cols=57 Identities=11% Similarity=-0.013 Sum_probs=32.6
Q ss_pred CcEEEEECCCCeEEeecCCCCCCCCceeeEEEEECCEEEEEcCccCCccceeceeeEEEcCCCcEEEee
Q psy8877 85 PDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVI 153 (180)
Q Consensus 85 ~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~W~~~~ 153 (180)
+.++++|++...-..+.. ....| ...+..++.+|+.-. ..+.+.++|+.+.+-...-
T Consensus 189 ~~I~~~~~~g~~~~~~~~--~~~~P---~gi~~d~~~lyva~~-------~~~~v~~~d~~~g~~~~~i 245 (267)
T 1npe_A 189 HRAECLNPAQPGRRKVLE--GLQYP---FAVTSYGKNLYYTDW-------KTNSVIAMDLAISKEMDTF 245 (267)
T ss_dssp TEEEEEETTEEEEEEEEE--CCCSE---EEEEEETTEEEEEET-------TTTEEEEEETTTTEEEEEE
T ss_pred CEEEEEecCCCceEEEec--CCCCc---eEEEEeCCEEEEEEC-------CCCeEEEEeCCCCCceEEE
Confidence 568888887654333321 12222 233455788888532 1246899999877655443
No 74
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=39.08 E-value=1.4e+02 Score=23.41 Aligned_cols=75 Identities=8% Similarity=0.022 Sum_probs=41.6
Q ss_pred CcEEEEECCCCe--EEeecCCCCCCCCceeeEEEEECCEEEEEcCccCCccceeceeeEEEcCCC--cEEEeecCCCCCC
Q psy8877 85 PDLVYLDLKYFT--WIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQ--EWARVIPHGAPPT 160 (180)
Q Consensus 85 ~~~~~~d~~~~~--w~~~~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~d~~~~--~W~~~~~~~~~~~ 160 (180)
..+..+|+.+.+ |+... +.+......+.-++.+|+ |. .+ ..+..||.++. .|+.-...
T Consensus 466 G~l~A~D~~tG~~~W~~~~-----~~~~~~g~~~tagglvf~-g~-~d------g~l~A~D~~tG~~lW~~~~~~----- 527 (582)
T 1flg_A 466 GSLRAMDPVSGKVVWEHKE-----HLPLWAGVLATAGNLVFT-GT-GD------GYFKAFDAKSGKELWKFQTGS----- 527 (582)
T ss_dssp EEEEEECTTTCCEEEEEEE-----SSCCCSCCEEETTTEEEE-EC-TT------SEEEEEETTTCCEEEEEECSS-----
T ss_pred ceEEEEECCCCCEEEEecC-----CCCCcccceEeCCCEEEE-EC-CC------CcEEEEECCCCCEEEEecCCC-----
Confidence 458888988764 87643 223333344445676666 32 22 26889998766 46653322
Q ss_pred CCcceeEEE-ECCEEEEE
Q psy8877 161 KRRRQSCII-KGDTLIMF 177 (180)
Q Consensus 161 ~r~~~~~~~-~~~~i~~~ 177 (180)
......++. .+++.||.
T Consensus 528 g~~a~P~~y~~~G~qYv~ 545 (582)
T 1flg_A 528 GIVSPPITWEQDGEQYLG 545 (582)
T ss_dssp CCCSCCEEEEETTEEEEE
T ss_pred CcccCceEEEECCEEEEE
Confidence 222222332 68887775
No 75
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=38.69 E-value=1.4e+02 Score=23.28 Aligned_cols=64 Identities=8% Similarity=-0.178 Sum_probs=36.1
Q ss_pred CcEEEEECCCCeEEeecCCCC-CCCCce---eeEEEEE-CCEEEEEcCccCCccceeceeeEEEcCCCcEEEeec
Q psy8877 85 PDLVYLDLKYFTWIRPNTTGS-VPVGRR---SHSAFVY-GDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIP 154 (180)
Q Consensus 85 ~~~~~~d~~~~~w~~~~~~~~-~~~~r~---~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~ 154 (180)
..++++|+.+.++.++..... ...+.. ....+.. ++++++.+.. . ...+|.+|+.+...+.+..
T Consensus 265 ~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~-----~~~l~~~d~~~~~~~~l~~ 333 (662)
T 3azo_A 265 WNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-G-----AAVLGILDPESGELVDAAG 333 (662)
T ss_dssp CEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-S-----SCEEEEEETTTTEEEECCS
T ss_pred eEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-C-----ccEEEEEECCCCcEEEecC
Confidence 479999998888888743110 000111 1122333 5666665443 2 3468888988877766643
No 76
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=37.28 E-value=95 Score=21.03 Aligned_cols=59 Identities=8% Similarity=-0.039 Sum_probs=32.4
Q ss_pred CcEEEEECCCCeEEeecCCCCCCCCceeeEEEE-ECCEEEEEcCccCCccceeceeeEEEcCCCcEEEe
Q psy8877 85 PDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFV-YGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARV 152 (180)
Q Consensus 85 ~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~W~~~ 152 (180)
..+.++|.++.+..+.-. ...+.. .-.+++. -+++.++.|+.+. .+..+|+.+.+....
T Consensus 45 ~tV~iWd~~tg~~~~~~~-~~~~~~-~V~~v~~~~~~~~l~sgs~Dg-------~v~iw~~~~~~~~~~ 104 (318)
T 4ggc_A 45 NSVYLWSASSGDILQLLQ-MEQPGE-YISSVAWIKEGNYLAVGTSSA-------EVQLWDVQQQKRLRN 104 (318)
T ss_dssp TEEEEEETTTCCEEEEEE-CCSTTC-CEEEEEECTTSSEEEEEETTS-------EEEEEETTTTEEEEE
T ss_pred CEEEEEECCCCCEEEEEE-ecCCCC-eEEEEEECCCCCEEEEEECCC-------cEEEeecCCceeEEE
Confidence 558888998887665421 111111 1112222 2567777776543 567778877765443
No 77
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=36.88 E-value=1.1e+02 Score=21.61 Aligned_cols=148 Identities=9% Similarity=0.071 Sum_probs=69.0
Q ss_pred ceEEeccCCCCCcCeeEEEe-CCEEEEEcccc----CCCCCceeeecCCCCCCcc-eeeeEEEECCEEEEEcCCCCCCCc
Q psy8877 2 HWTVHLTGGPRRVNHAAVLN-DNKIFTFGGYC----SGEDYVKRRPMDGEPPSYR-DFHTANIIDGRMYIWGGRGDESSL 75 (180)
Q Consensus 2 ~W~~~~~~~~~r~~~~~~~~-~~~iy~~GG~~----~~~~~~~~~~~~~~~p~~r-~~~~~~~~~~~lyv~GG~~~~~~~ 75 (180)
.|+.+.. +......++... ++.+|++|-.. ....-..|.......+.+. ...++...++.+|+.|..
T Consensus 26 ~W~~~~~-~~~~~~~~v~~~~~~~~~~~G~~g~i~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~------ 98 (327)
T 2xbg_A 26 PWEAIQL-PTTATILDMSFIDRHHGWLVGVNATLMETRDGGQTWEPRTLVLDHSDYRFNSVSFQGNEGWIVGEP------ 98 (327)
T ss_dssp CEEEEEC-SCSSCEEEEEESSSSCEEEEETTTEEEEESSTTSSCEECCCCCSCCCCEEEEEEEETTEEEEEEET------
T ss_pred CceEeec-CCCCcEEEEEECCCCcEEEEcCCCeEEEeCCCCCCCeECCCCCCCCCccEEEEEecCCeEEEEECC------
Confidence 6888753 322333444444 46788876311 0000112333322221222 233444556788887521
Q ss_pred ccCCCceecCcEEEEECCCCeEEeecCCCCCCCCceeeEEEEECCEEEEEcCccCCccceeceeeEEEcCCCcEEEeecC
Q psy8877 76 YHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPH 155 (180)
Q Consensus 76 ~~~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~ 155 (180)
..+++-+-.-.+|+++......|.. ....++.-++.+|+.+.. ..+++-+-.-.+|+++...
T Consensus 99 ---------g~i~~S~DgG~tW~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~--------g~v~~S~DgG~tW~~~~~~ 160 (327)
T 2xbg_A 99 ---------PIMLHTTDGGQSWSQIPLDPKLPGS-PRLIKALGNGSAEMITNV--------GAIYRTKDSGKNWQALVQE 160 (327)
T ss_dssp ---------TEEEEESSTTSSCEECCCCTTCSSC-EEEEEEEETTEEEEEETT--------CCEEEESSTTSSEEEEECS
T ss_pred ---------CeEEEECCCCCCceECccccCCCCC-eEEEEEECCCCEEEEeCC--------ccEEEEcCCCCCCEEeecC
Confidence 2344433235799998642112222 222333346788877631 1344433235689998753
Q ss_pred CCCCCCCcceeEEEE-CCEEEEEc
Q psy8877 156 GAPPTKRRRQSCIIK-GDTLIMFG 178 (180)
Q Consensus 156 ~~~~~~r~~~~~~~~-~~~i~~~G 178 (180)
. +...+++... ++.++++|
T Consensus 161 ~----~~~~~~~~~~~~~~~~~~g 180 (327)
T 2xbg_A 161 A----IGVMRNLNRSPSGEYVAVS 180 (327)
T ss_dssp C----CCCEEEEEECTTSCEEEEE
T ss_pred C----CcceEEEEEcCCCcEEEEE
Confidence 2 2223333332 45566554
No 78
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=36.25 E-value=32 Score=24.44 Aligned_cols=55 Identities=9% Similarity=0.012 Sum_probs=24.9
Q ss_pred CcEEEEECCCCeEEeecCCCCCCCCceeeEEEEE-CCEEEEEcCccCCccceeceeeEEEcCCCc
Q psy8877 85 PDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVY-GDGLYIFGGYNGLVEEHYNDIYRYCTRRQE 148 (180)
Q Consensus 85 ~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~ 148 (180)
..+.+||..+..|..+...... ..... +++.. ++++++.|+.+. .+..||+.+..
T Consensus 33 ~~i~iw~~~~~~~~~~~~~~~h-~~~v~-~~~~s~~~~~l~s~s~d~-------~v~vwd~~~~~ 88 (377)
T 3dwl_C 33 NQVELYEQDGNGWKHARTFSDH-DKIVT-CVDWAPKSNRIVTCSQDR-------NAYVYEKRPDG 88 (377)
T ss_dssp SCBCEEEEETTEEEECCCBCCC-SSCEE-EEEECTTTCCEEEEETTS-------SEEEC------
T ss_pred CEEEEEEccCCceEEEEEEecC-CceEE-EEEEeCCCCEEEEEeCCC-------eEEEEEcCCCC
Confidence 3466778888877766431111 11111 22222 456666665433 46667776655
No 79
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=36.08 E-value=1e+02 Score=20.89 Aligned_cols=61 Identities=18% Similarity=0.297 Sum_probs=35.5
Q ss_pred CCEEEEEcCCCCCCCcccCCCceecCcEEEEECCCCeEEee--cCCCCCCC------CceeeEEEEE--CCEEEEEcCcc
Q psy8877 60 DGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRP--NTTGSVPV------GRRSHSAFVY--GDGLYIFGGYN 129 (180)
Q Consensus 60 ~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~w~~~--~~~~~~~~------~r~~~~~~~~--~~~i~v~GG~~ 129 (180)
++++|+|-| +..|+||...++...- ......|. +..-.++... ++++|+|-|.
T Consensus 127 ~gk~yfFkG----------------~~yw~~d~~~~~~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG~- 189 (225)
T 3oyo_A 127 GKEVYLFKG----------------NKYVRIAYDSKQLVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKGQ- 189 (225)
T ss_dssp TTEEEEEET----------------TEEEEEETTTTEEEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEETT-
T ss_pred CCcEEEEeC----------------CeEEEEECCCCeecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEECC-
Confidence 679999976 4468888766654431 00001111 2223344443 6899998553
Q ss_pred CCccceeceeeEEEcC
Q psy8877 130 GLVEEHYNDIYRYCTR 145 (180)
Q Consensus 130 ~~~~~~~~~~~~~d~~ 145 (180)
..|+||..
T Consensus 190 --------~ywr~d~~ 197 (225)
T 3oyo_A 190 --------NYVRIDFT 197 (225)
T ss_dssp --------EEEEEECC
T ss_pred --------EEEEEeCC
Confidence 57888876
No 80
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=34.95 E-value=1.5e+02 Score=22.55 Aligned_cols=16 Identities=13% Similarity=0.098 Sum_probs=12.7
Q ss_pred CeeEEEeCCEEEEEcc
Q psy8877 15 NHAAVLNDNKIFTFGG 30 (180)
Q Consensus 15 ~~~~~~~~~~iy~~GG 30 (180)
.-+++.+.+++|+|-|
T Consensus 265 fDAi~~~~ge~y~Fkg 280 (450)
T 1su3_A 265 FDAITTIRGEVMFFKD 280 (450)
T ss_dssp CSEEEEETTEEEEEET
T ss_pred cceEEecCCeEEEEeC
Confidence 3466778899999988
No 81
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=34.67 E-value=1.6e+02 Score=22.92 Aligned_cols=119 Identities=11% Similarity=0.059 Sum_probs=63.3
Q ss_pred CeeEEEeCCEEEEEccc-c-----CC-CCCceeeecCCCCCCc--------ceeeeEEEECCEEEEEcCCCCCCCcccCC
Q psy8877 15 NHAAVLNDNKIFTFGGY-C-----SG-EDYVKRRPMDGEPPSY--------RDFHTANIIDGRMYIWGGRGDESSLYHSG 79 (180)
Q Consensus 15 ~~~~~~~~~~iy~~GG~-~-----~~-~~~~~~~~~~~~~p~~--------r~~~~~~~~~~~lyv~GG~~~~~~~~~~~ 79 (180)
..+.++.+++||+.... . .. ..-+..|.++...+.. ......+..++.||+...
T Consensus 55 ~~~P~v~~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~----------- 123 (571)
T 2ad6_A 55 EGAPLVIGDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA----------- 123 (571)
T ss_dssp CSCCEEETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-----------
T ss_pred ccccEEECCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeC-----------
Confidence 35566789999998762 1 11 2224556665332211 112234567888887632
Q ss_pred CceecCcEEEEECCCC--eEEeecCCCCCCCC-ceeeEEEEECCEEEEEcCccCCccceeceeeEEEcCCC--cEEEe
Q psy8877 80 SEVYCPDLVYLDLKYF--TWIRPNTTGSVPVG-RRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQ--EWARV 152 (180)
Q Consensus 80 ~~~~~~~~~~~d~~~~--~w~~~~~~~~~~~~-r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~d~~~~--~W~~~ 152 (180)
...++.+|..+. .|+.-.. ..+.. ....+.++.++++|+-....+ ......++.||.++. .|+.-
T Consensus 124 ----dg~l~alD~~tG~~~W~~~~~--~~~~~~~~~~~P~v~~g~v~vg~~~~~--~~~~g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 124 ----NGHLLALDAKTGKINWEVEVC--DPKVGSTLTQAPFVAKDTVLMGCSGAE--LGVRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp ----TSEEEEEETTTCCEEEEEECC--CGGGTCBCCSCCEEETTEEEEECBCGG--GTCCCEEEEEETTTCCEEEEEE
T ss_pred ----CCEEEEEECCCCCEEEEecCC--CCCccceeccCCEEECCEEEEEecCCc--cCCCCEEEEEECCCCcEEEEEc
Confidence 145889998776 5876421 11110 112223456888876432211 112347889998755 57653
No 82
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=34.35 E-value=1.6e+02 Score=22.64 Aligned_cols=122 Identities=18% Similarity=0.183 Sum_probs=68.4
Q ss_pred CCCCCcceeeeEEEECCEEEEEcCCCCCCCcccCCCceecCcEEEEECC-----CCeEEeecCCCCCCCCceeeEEEEEC
Q psy8877 45 GEPPSYRDFHTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLK-----YFTWIRPNTTGSVPVGRRSHSAFVYG 119 (180)
Q Consensus 45 ~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~d~~-----~~~w~~~~~~~~~~~~r~~~~~~~~~ 119 (180)
+-.|..-.-|+.|.+++.=|.+|=.++.- ....-.+..+... .-.-++++. +.-......|.-..+
T Consensus 278 ~~i~~vTe~HSFa~i~~~~fa~GyHnGDv-------~PRe~G~~yfs~~~~sp~~~vrr~i~s--ey~~~AsEPCvkyYd 348 (670)
T 3ju4_A 278 GLIPSVTEVHSFATIDNNGFAMGYHQGDV-------APREVGLFYFPDAFNSPSNYVRRQIPS--EYEPDASEPCIKYYD 348 (670)
T ss_dssp CSCTTCSEEEEEEECSSSCEEEEEEECSS-------SSCEEEEEEETTTTTCTTCCEEEECCG--GGCTTEEEEEEEEET
T ss_pred ccccceeeeeeeeEecCCceEEEeccCCC-------CcceeeEEEecccccCCcceeeeechh--hhccccccchhhhhC
Confidence 34455556688889988777886333210 1111222223211 112233332 222333445556789
Q ss_pred CEEEEEcCccCCccceeceeeEEEcCCCcEEEeecCCCCCCCCcceeEEEECCEEEEEc
Q psy8877 120 DGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPHGAPPTKRRRQSCIIKGDTLIMFG 178 (180)
Q Consensus 120 ~~i~v~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~r~~~~~~~~~~~i~~~G 178 (180)
+.+|+.--.+.. ...-..+.+-+..-..|+.+..+.. ........+.+++.||+||
T Consensus 349 gvLyLtTRgt~~-~~~GS~L~rs~d~Gq~w~slrfp~n--vHhtnlPFakvgD~l~mFg 404 (670)
T 3ju4_A 349 GVLYLITRGTRG-DRLGSSLHRSRDIGQTWESLRFPHN--VHHTTLPFAKVGDDLIMFG 404 (670)
T ss_dssp TEEEEEEEESCT-TSCCCEEEEESSTTSSCEEEECTTC--CCSSCCCEEEETTEEEEEE
T ss_pred CEEEEEecCcCC-CCCcceeeeecccCCchhheecccc--ccccCCCcceeCCEEEEEe
Confidence 999997533322 2345567777888899999987531 2233334567899999998
No 83
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=33.62 E-value=1.4e+02 Score=21.79 Aligned_cols=54 Identities=7% Similarity=-0.016 Sum_probs=27.9
Q ss_pred CcEEEEECCCCeEEeecCCCCCCCCceeeEEEEECCEEEEEcCccCCccceeceeeEEEcCCCcEE
Q psy8877 85 PDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWA 150 (180)
Q Consensus 85 ~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~W~ 150 (180)
..+..+|..+.+-...-. + ...+ -.+...++..++.|+.+. .+..||+.+.+-.
T Consensus 179 g~i~vwd~~~~~~~~~~~-~-h~~~---v~~~~~~~~~l~s~s~dg-------~i~~wd~~~~~~~ 232 (445)
T 2ovr_B 179 RTLKVWNAETGECIHTLY-G-HTST---VRCMHLHEKRVVSGSRDA-------TLRVWDIETGQCL 232 (445)
T ss_dssp SCEEEEETTTTEEEEEEC-C-CSSC---EEEEEEETTEEEEEETTS-------EEEEEESSSCCEE
T ss_pred CeEEEEECCcCcEEEEEC-C-CCCc---EEEEEecCCEEEEEeCCC-------EEEEEECCCCcEE
Confidence 447888988776444321 1 1111 122333455556655433 5777777766543
No 84
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=33.38 E-value=1.4e+02 Score=21.70 Aligned_cols=77 Identities=5% Similarity=-0.077 Sum_probs=40.5
Q ss_pred CCEEEEEcCCCCCCCcccCCCceecCcEEEEECCCCeE-EeecCCCCCCCCceeeEEEEECCE-EEEEcCccCCccceec
Q psy8877 60 DGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTW-IRPNTTGSVPVGRRSHSAFVYGDG-LYIFGGYNGLVEEHYN 137 (180)
Q Consensus 60 ~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~w-~~~~~~~~~~~~r~~~~~~~~~~~-i~v~GG~~~~~~~~~~ 137 (180)
++++|+......... .....++++++|..+.+- .+++. +. +..+.+..-+++ +++..... .+
T Consensus 278 ~~~lyV~~~~~~~~~-----~~~~~~~V~VID~~t~~vv~~i~~-g~----~p~~i~~s~Dg~~~l~v~~~~------~~ 341 (373)
T 2mad_H 278 SDGIYLLTSEQSAWK-----LHAAAKEVTSVTGLVGQTSSQISL-GH----DVDAISVAQDGGPDLYALSAG------TE 341 (373)
T ss_pred CCEEEEEeccCCccc-----ccCCCCeEEEEECCCCEEEEEEEC-CC----CcCeEEECCCCCeEEEEEcCC------CC
Confidence 458888754211000 012347899999988875 34432 11 122222333555 44443222 24
Q ss_pred eeeEEEcCCCcEEEe
Q psy8877 138 DIYRYCTRRQEWARV 152 (180)
Q Consensus 138 ~~~~~d~~~~~W~~~ 152 (180)
++.++|+.+.+-...
T Consensus 342 ~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 342 VLHIYDAGAGDQDQS 356 (373)
T ss_pred eEEEEECCCCCEEee
Confidence 799999887765544
No 85
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=33.00 E-value=1.2e+02 Score=20.88 Aligned_cols=68 Identities=16% Similarity=0.129 Sum_probs=37.3
Q ss_pred CCEEEEEcCCCCCCCcccCCCceecCcEEEEECCCCeEEeecCCCCCCCCceeeEEEEE-CCE-EEEEcCccCCccceec
Q psy8877 60 DGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVY-GDG-LYIFGGYNGLVEEHYN 137 (180)
Q Consensus 60 ~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~-~~~-i~v~GG~~~~~~~~~~ 137 (180)
++.+|+.++. ...++++|+.+.+....-. .+....-+..+.. +++ +|+.+.. ..
T Consensus 10 ~~~~~v~~~~--------------~~~v~~~d~~~~~~~~~~~---~~~~~~~~~~~~s~dg~~~~v~~~~-------~~ 65 (349)
T 1jmx_B 10 GHEYMIVTNY--------------PNNLHVVDVASDTVYKSCV---MPDKFGPGTAMMAPDNRTAYVLNNH-------YG 65 (349)
T ss_dssp TCEEEEEEET--------------TTEEEEEETTTTEEEEEEE---CSSCCSSCEEEECTTSSEEEEEETT-------TT
T ss_pred CCEEEEEeCC--------------CCeEEEEECCCCcEEEEEe---cCCCCCCceeEECCCCCEEEEEeCC-------CC
Confidence 4577777643 2568899998887654321 1110011223332 444 6666432 13
Q ss_pred eeeEEEcCCCcEEE
Q psy8877 138 DIYRYCTRRQEWAR 151 (180)
Q Consensus 138 ~~~~~d~~~~~W~~ 151 (180)
.++.+|+.+.+...
T Consensus 66 ~i~~~d~~t~~~~~ 79 (349)
T 1jmx_B 66 DIYGIDLDTCKNTF 79 (349)
T ss_dssp EEEEEETTTTEEEE
T ss_pred cEEEEeCCCCcEEE
Confidence 68899998876554
No 86
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=32.71 E-value=1.9e+02 Score=23.18 Aligned_cols=57 Identities=9% Similarity=0.022 Sum_probs=32.2
Q ss_pred cEEEEECCCCeEEeecCCCCCCCCceeeEEEEECCEEEEEcCccCCccceeceeeEEEcCCCcEEEee
Q psy8877 86 DLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVI 153 (180)
Q Consensus 86 ~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~W~~~~ 153 (180)
-+.+||+.++++..... ..+|... -.+.+..++.|++.. ...+.+||+.+.+.....
T Consensus 537 Gl~~~~~~~~~~~~~~~-~gl~~~~-i~~i~~~~g~lWi~t---------~~Gl~~~~~~~~~~~~~~ 593 (758)
T 3ott_A 537 GVMRINPKDESQQSISF-GSFSNNE-ILSMTCVKNSIWVST---------TNGLWIIDRKTMDARQQN 593 (758)
T ss_dssp EEEEECC--CCCCBCCC-CC---CC-EEEEEEETTEEEEEE---------SSCEEEEETTTCCEEEC-
T ss_pred ceEEEecCCCceEEecc-cCCCccc-eEEEEECCCCEEEEC---------CCCeEEEcCCCceeEEec
Confidence 47889988887776532 2244322 223333477887743 236889999988877643
No 87
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=32.60 E-value=1.4e+02 Score=21.51 Aligned_cols=71 Identities=8% Similarity=-0.015 Sum_probs=38.7
Q ss_pred CCEEEEEcCCCCCCCcccCCCceecCcEEEEECCCCeEEeecCCCCCCCCceeeEEEEE--CCEEEEEcCccCCccceec
Q psy8877 60 DGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVY--GDGLYIFGGYNGLVEEHYN 137 (180)
Q Consensus 60 ~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~ 137 (180)
++.+++.++.. ..+.++|+.+.+..+....+...........+.+ ++++++.++.+.
T Consensus 133 ~~~~~~~~~~~--------------~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~------- 191 (433)
T 3bws_A 133 NTRLAIPLLED--------------EGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQAN------- 191 (433)
T ss_dssp SSEEEEEBTTS--------------SSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGT-------
T ss_pred CCeEEEEeCCC--------------CeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCC-------
Confidence 55777766432 3488999998876654221000011111122233 577777765432
Q ss_pred eeeEEEcCCCcEEE
Q psy8877 138 DIYRYCTRRQEWAR 151 (180)
Q Consensus 138 ~~~~~d~~~~~W~~ 151 (180)
.+..||+.+.+...
T Consensus 192 ~v~~~d~~~~~~~~ 205 (433)
T 3bws_A 192 AVHVFDLKTLAYKA 205 (433)
T ss_dssp EEEEEETTTCCEEE
T ss_pred EEEEEECCCceEEE
Confidence 68888988765443
No 88
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=32.34 E-value=1.1e+02 Score=20.23 Aligned_cols=61 Identities=15% Similarity=0.118 Sum_probs=30.6
Q ss_pred cEEEEECCCCeEEeecCCCCCCCCceeeEEEEECCEEEEEcCccCCccceeceeeEEEcCCCcEEEeec
Q psy8877 86 DLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIP 154 (180)
Q Consensus 86 ~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~ 154 (180)
.+|.++..+.....+.. .+ .........-+++.+++.+..+. ...+|.+++.......+..
T Consensus 154 ~l~~~~~~~~~~~~~~~---~~-~~~~~~~~s~dg~~l~~~~~~~~----~~~i~~~~~~~~~~~~~~~ 214 (297)
T 2ojh_A 154 DIYSMDIDSGVETRLTH---GE-GRNDGPDYSPDGRWIYFNSSRTG----QMQIWRVRVDGSSVERITD 214 (297)
T ss_dssp EEEEEETTTCCEEECCC---SS-SCEEEEEECTTSSEEEEEECTTS----SCEEEEEETTSSCEEECCC
T ss_pred EEEEEECCCCcceEccc---CC-CccccceECCCCCEEEEEecCCC----CccEEEECCCCCCcEEEec
Confidence 57777777776666532 11 11222222224554444332121 2467788877766665543
No 89
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=32.27 E-value=1.5e+02 Score=21.70 Aligned_cols=53 Identities=11% Similarity=0.088 Sum_probs=29.0
Q ss_pred CcEEEEECCCCeEEeecCCCCCCCCceeeEEEEECCEEEEEcCccCCccceeceeeEEEcCCCcE
Q psy8877 85 PDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEW 149 (180)
Q Consensus 85 ~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~W 149 (180)
..+..||..+.+-...-. + ... ...+..+++..++.|+.+. .+..||+.+..-
T Consensus 332 g~i~vwd~~~~~~~~~~~-~-h~~---~v~~~~~~~~~l~s~s~dg-------~v~vwd~~~~~~ 384 (464)
T 3v7d_B 332 TTIRIWDLENGELMYTLQ-G-HTA---LVGLLRLSDKFLVSAAADG-------SIRGWDANDYSR 384 (464)
T ss_dssp SCEEEEETTTTEEEEEEC-C-CSS---CEEEEEECSSEEEEEETTS-------EEEEEETTTCCE
T ss_pred CcEEEEECCCCcEEEEEe-C-CCC---cEEEEEEcCCEEEEEeCCC-------cEEEEECCCCce
Confidence 457888888776443311 1 111 1223345566666665543 477788776553
No 90
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=32.09 E-value=1.8e+02 Score=22.78 Aligned_cols=63 Identities=11% Similarity=-0.011 Sum_probs=32.6
Q ss_pred CcEEEEECCCCeEEeecCCCCCCCCceeeEEEEECCE-EEEEcCccCCccceeceeeEEEcCCCcEEEee
Q psy8877 85 PDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYGDG-LYIFGGYNGLVEEHYNDIYRYCTRRQEWARVI 153 (180)
Q Consensus 85 ~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~-i~v~GG~~~~~~~~~~~~~~~d~~~~~W~~~~ 153 (180)
..+|.+|........+.. + ........+..-+++ +++.+.... .....++.+|+.+...+.+.
T Consensus 335 ~~l~~~~~~~~~~~~l~~-~--~~~v~~~~~~spdg~~l~~~~~~~~---~~~~~l~~~d~~~~~~~~l~ 398 (706)
T 2z3z_A 335 NHLYLYDTTGRLIRQVTK-G--EWEVTNFAGFDPKGTRLYFESTEAS---PLERHFYCIDIKGGKTKDLT 398 (706)
T ss_dssp CEEEEEETTSCEEEECCC-S--SSCEEEEEEECTTSSEEEEEESSSC---TTCBEEEEEETTCCCCEESC
T ss_pred cEEEEEECCCCEEEecCC-C--CeEEEeeeEEcCCCCEEEEEecCCC---CceEEEEEEEcCCCCceecc
Confidence 568888877777776632 1 111111111112344 544433221 12347888998877766554
No 91
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=31.74 E-value=1.2e+02 Score=20.43 Aligned_cols=70 Identities=3% Similarity=-0.108 Sum_probs=37.2
Q ss_pred CCEEEEEcCCCCCCCcccCCCceecCcEEEEECCCCeEEeecCCCCCCCCceeeEEEE-ECCEEEEEcCccCCccceece
Q psy8877 60 DGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFV-YGDGLYIFGGYNGLVEEHYND 138 (180)
Q Consensus 60 ~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~ 138 (180)
++.||+..... ...+.+||.....-..+.. .....+ +..+. -++++|+.... ...
T Consensus 88 ~g~l~v~~~~~-------------~~~i~~~d~~g~~~~~~~~-~~~~~~---~~i~~~~~g~l~v~~~~-------~~~ 143 (286)
T 1q7f_A 88 SGDIIVTERSP-------------THQIQIYNQYGQFVRKFGA-TILQHP---RGVTVDNKGRIIVVECK-------VMR 143 (286)
T ss_dssp TTEEEEEECGG-------------GCEEEEECTTSCEEEEECT-TTCSCE---EEEEECTTSCEEEEETT-------TTE
T ss_pred CCeEEEEcCCC-------------CCEEEEECCCCcEEEEecC-ccCCCc---eEEEEeCCCCEEEEECC-------CCE
Confidence 56888875321 2568889866554444422 111111 22322 25678876432 136
Q ss_pred eeEEEcCCCcEEEee
Q psy8877 139 IYRYCTRRQEWARVI 153 (180)
Q Consensus 139 ~~~~d~~~~~W~~~~ 153 (180)
+.+||+.......+.
T Consensus 144 i~~~~~~g~~~~~~~ 158 (286)
T 1q7f_A 144 VIIFDQNGNVLHKFG 158 (286)
T ss_dssp EEEECTTSCEEEEEE
T ss_pred EEEEcCCCCEEEEeC
Confidence 888887665555544
No 92
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=31.40 E-value=1.9e+02 Score=22.59 Aligned_cols=75 Identities=8% Similarity=0.089 Sum_probs=39.7
Q ss_pred CcEEEEECCCCe--EEeecCCCCCCCCceeeEEEEECCEEEEEcCccCCccceeceeeEEEcCCC--cEEEeecCCCCCC
Q psy8877 85 PDLVYLDLKYFT--WIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQ--EWARVIPHGAPPT 160 (180)
Q Consensus 85 ~~~~~~d~~~~~--w~~~~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~d~~~~--~W~~~~~~~~~~~ 160 (180)
..++.+|+.+.+ |+.... .+......+..++.+|+ |.. + ..++.+|.++. .|+.-.. .
T Consensus 444 g~l~a~D~~tG~~~W~~~~~-----~~~~~~~~~t~gg~v~~-g~~-d------g~l~a~D~~tG~~lw~~~~~-----~ 505 (571)
T 2ad6_A 444 GQIRAFDLTTGKAKWTKWEK-----FAAWGGTLYTKGGLVWY-ATL-D------GYLKALDNKDGKELWNFKMP-----S 505 (571)
T ss_dssp EEEEEECTTTCCEEEEEEES-----SCCCSBCEEETTTEEEE-ECT-T------SEEEEEETTTCCEEEEEECS-----S
T ss_pred CeEEEEECCCCCEEEEecCC-----CCccceeEEECCCEEEE-EcC-C------CeEEEEECCCCCEEEEEeCC-----C
Confidence 568889988764 776421 11122223334677776 322 2 36889998765 4554322 1
Q ss_pred CCcceeEEE-ECCEEEEE
Q psy8877 161 KRRRQSCII-KGDTLIMF 177 (180)
Q Consensus 161 ~r~~~~~~~-~~~~i~~~ 177 (180)
......++. .++++|+.
T Consensus 506 ~~~~~p~~~~~~G~~yv~ 523 (571)
T 2ad6_A 506 GGIGSPMTYSFKGKQYIG 523 (571)
T ss_dssp CCCSCCEEEEETTEEEEE
T ss_pred CcEeeeEEEEECCEEEEE
Confidence 122222322 68887774
No 93
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=30.45 E-value=1.5e+02 Score=21.26 Aligned_cols=57 Identities=12% Similarity=-0.069 Sum_probs=32.1
Q ss_pred CcEEEEECCCCeEEeecCCCCCCCCceeeEEEEE-CCEEEEEcCccCCccceeceeeEEEcCCCcEEE
Q psy8877 85 PDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVY-GDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWAR 151 (180)
Q Consensus 85 ~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~W~~ 151 (180)
..+..+|..+.+...... ......-.+++.. ++.+++.|+.+. .+..||+.+.+...
T Consensus 113 ~~v~lw~~~~~~~~~~~~---~~~~~~v~~v~~s~~~~~l~~~~~dg-------~i~iwd~~~~~~~~ 170 (401)
T 4aez_A 113 RNVYVWNADSGSVSALAE---TDESTYVASVKWSHDGSFLSVGLGNG-------LVDIYDVESQTKLR 170 (401)
T ss_dssp TEEEEEETTTCCEEEEEE---CCTTCCEEEEEECTTSSEEEEEETTS-------CEEEEETTTCCEEE
T ss_pred CeEEEeeCCCCcEeEeee---cCCCCCEEEEEECCCCCEEEEECCCC-------eEEEEECcCCeEEE
Confidence 558889998887666532 1111112222222 566666665433 57788887765444
No 94
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=30.04 E-value=1.5e+02 Score=21.05 Aligned_cols=56 Identities=13% Similarity=0.009 Sum_probs=27.9
Q ss_pred CcEEEEECCCCeEEeecCCCCCCCCceeeEEEEECC-EEEEEcCccCCccceeceeeEEEcCCCcEE
Q psy8877 85 PDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYGD-GLYIFGGYNGLVEEHYNDIYRYCTRRQEWA 150 (180)
Q Consensus 85 ~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~~~-~i~v~GG~~~~~~~~~~~~~~~d~~~~~W~ 150 (180)
..+.++|+.+.+-...-. .........++..++ .+++.|+.+. .+..||+.+.+-.
T Consensus 149 ~~i~iwd~~~~~~~~~~~---~h~~~V~~~~~~~~~~~~l~s~s~D~-------~v~iwd~~~~~~~ 205 (344)
T 4gqb_B 149 ICIKVWDLAQQVVLSSYR---AHAAQVTCVAASPHKDSVFLSCSEDN-------RILLWDTRCPKPA 205 (344)
T ss_dssp SCEEEEETTTTEEEEEEC---CCSSCEEEEEECSSCTTEEEEEETTS-------CEEEEETTSSSCE
T ss_pred CeEEEEECCCCcEEEEEc---CcCCceEEEEecCCCCCceeeecccc-------cccccccccccee
Confidence 347778888776544321 111112212222233 4666665543 4677787766543
No 95
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=29.74 E-value=1.6e+02 Score=21.33 Aligned_cols=54 Identities=4% Similarity=-0.103 Sum_probs=27.8
Q ss_pred CcEEEEECCCCeEEeecCCCCCCCCceeeEEEEEC-CEEEEEcCccCCccceeceeeEEEcCCCc
Q psy8877 85 PDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYG-DGLYIFGGYNGLVEEHYNDIYRYCTRRQE 148 (180)
Q Consensus 85 ~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~~-~~i~v~GG~~~~~~~~~~~~~~~d~~~~~ 148 (180)
..+..+|..+.+...... .... ....+...+ +.+++..|..+. .+..||..+.+
T Consensus 301 ~~I~iwd~~t~~~~~~~~---~~~~-v~~~~~~~~~~~lv~~sg~~d~------~I~iwd~~~~~ 355 (420)
T 4gga_A 301 RHIRIWNVCSGACLSAVD---AHSQ-VCSILWSPHYKELISGHGFAQN------QLVIWKYPTMA 355 (420)
T ss_dssp CEEEEEETTTTEEEEEEE---CSSC-EEEEEEETTTTEEEEEECTTTC------CEEEEETTTCC
T ss_pred CEEEEEeCCccccceeec---cccc-eeeeeecCCCCeEEEEEecCCC------EEEEEECCCCc
Confidence 457888988887555422 1111 111222223 345544455443 57778876654
No 96
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=29.58 E-value=1.4e+02 Score=20.47 Aligned_cols=18 Identities=6% Similarity=-0.040 Sum_probs=13.1
Q ss_pred eeeEEEcCCCcEEEeecC
Q psy8877 138 DIYRYCTRRQEWARVIPH 155 (180)
Q Consensus 138 ~~~~~d~~~~~W~~~~~~ 155 (180)
.+|.+|+.+.+++.+...
T Consensus 302 ~v~~~d~~~g~~~~~~~~ 319 (343)
T 1ri6_A 302 SVYEIVGEQGLLHEKGRY 319 (343)
T ss_dssp EEEEEETTTTEEEEEEEE
T ss_pred EEEEEcCCCceeeEcccc
Confidence 466668888888877653
No 97
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=29.22 E-value=1.3e+02 Score=19.93 Aligned_cols=61 Identities=13% Similarity=-0.098 Sum_probs=31.9
Q ss_pred cCcEEEEECCCCeEEeecCCCCCCCCceeeEEEEE-CCEEEEEcCccCCccceeceeeEEEcCCCcEEEeec
Q psy8877 84 CPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVY-GDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIP 154 (180)
Q Consensus 84 ~~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~ 154 (180)
...++.++..+.....+.. . .. ....+.. +++.+++.+..+. ...+|.+++.+.....+..
T Consensus 109 ~~~l~~~~~~~~~~~~~~~---~-~~--~~~~~~spdg~~l~~~~~~~~----~~~l~~~~~~~~~~~~~~~ 170 (297)
T 2ojh_A 109 KSAIYLLPSTGGTPRLMTK---N-LP--SYWHGWSPDGKSFTYCGIRDQ----VFDIYSMDIDSGVETRLTH 170 (297)
T ss_dssp SCEEEEEETTCCCCEECCS---S-SS--EEEEEECTTSSEEEEEEEETT----EEEEEEEETTTCCEEECCC
T ss_pred cceEEEEECCCCceEEeec---C-CC--ccceEECCCCCEEEEEECCCC----ceEEEEEECCCCcceEccc
Confidence 3678888888777655532 1 11 1222222 4554443222221 1367788887777665543
No 98
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=29.04 E-value=1.7e+02 Score=21.33 Aligned_cols=87 Identities=8% Similarity=0.057 Sum_probs=41.1
Q ss_pred CcEEEEECCCCeEEeecCC--CCC-CCCceee-EEEEECCEEEEEcCccCCccceeceeeEEEcCCCcEEEeecCCCCCC
Q psy8877 85 PDLVYLDLKYFTWIRPNTT--GSV-PVGRRSH-SAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPHGAPPT 160 (180)
Q Consensus 85 ~~~~~~d~~~~~w~~~~~~--~~~-~~~r~~~-~~~~~~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~ 160 (180)
..+++||+.+.....++.. |.. ...-... .....+++++++.-.. ...+.+-..++ |......+..|.
T Consensus 206 g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~~-------~~~~~l~S~Dg-W~sa~~~g~~~~ 277 (334)
T 2p9w_A 206 RALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGARA-------PYAISFRSWDN-WKSANIKKTKRS 277 (334)
T ss_dssp SSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEEET-------TEEEEEECSST-TSEEEEEEEECG
T ss_pred CeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEEEEEcCC-------CCEEEEECCCC-cceeEEeeeecC
Confidence 5689999875432122211 211 1111111 2334688886654221 23344444444 888766542222
Q ss_pred ---CCcceeEEE----ECCEEEEEcC
Q psy8877 161 ---KRRRQSCII----KGDTLIMFGG 179 (180)
Q Consensus 161 ---~r~~~~~~~----~~~~i~~~GG 179 (180)
++.....++ .+++||++-+
T Consensus 278 ~~~~~g~tt~t~~~~~~~~~iYvv~~ 303 (334)
T 2p9w_A 278 ELQNSGFTAVADYYQGSEQGLYAVSA 303 (334)
T ss_dssp GGGSSCEEEEEEEEETTEEEEEEEEC
T ss_pred ccccCceeEEEEeccccCCeEEEEee
Confidence 233333333 4678998764
No 99
>4fmw_A RNA (guanine-9-)-methyltransferase domain-contain protein 2; structural genomics, structural genomics consortium, SGC, RN modification; HET: SAH; 2.00A {Homo sapiens}
Probab=28.89 E-value=28 Score=23.19 Aligned_cols=15 Identities=20% Similarity=0.572 Sum_probs=11.3
Q ss_pred CCEEEEEccccCCCC
Q psy8877 22 DNKIFTFGGYCSGED 36 (180)
Q Consensus 22 ~~~iy~~GG~~~~~~ 36 (180)
.+++||+||......
T Consensus 119 ~~~vYIIGGiVD~n~ 133 (197)
T 4fmw_A 119 ESKAYVIGGLVDHNH 133 (197)
T ss_dssp TTSEEEEECCCCTTS
T ss_pred CCCEEEEEEEEeCCC
Confidence 568999999766443
No 100
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=27.84 E-value=1.6e+02 Score=20.72 Aligned_cols=66 Identities=9% Similarity=0.017 Sum_probs=34.3
Q ss_pred CcEEEEECCCCeEEeecCCCCCCCCceeeEEEEECCEEEEEcCccCCccceeceeeEEEcCCCcEEEeec
Q psy8877 85 PDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIP 154 (180)
Q Consensus 85 ~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~ 154 (180)
..++.+|..+.++..+.. ..+.....+.+..-+++.+++...... .....++.+|+.+.+...+..
T Consensus 216 ~~l~~~d~~~~~~~~l~~--~~~~~~~~~~~~spdg~~l~~~~~~~~--~~~~~l~~~d~~~g~~~~l~~ 281 (396)
T 3c5m_A 216 ARMWLVNEDGSNVRKIKE--HAEGESCTHEFWIPDGSAMAYVSYFKG--QTDRVIYKANPETLENEEVMV 281 (396)
T ss_dssp CCCEEEETTSCCCEESSC--CCTTEEEEEEEECTTSSCEEEEEEETT--TCCEEEEEECTTTCCEEEEEE
T ss_pred ceEEEEECCCCceeEeec--cCCCccccceEECCCCCEEEEEecCCC--CccceEEEEECCCCCeEEeee
Confidence 568888888777776632 111111111122224554444333221 112348999998887776654
No 101
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=27.76 E-value=1.8e+02 Score=22.78 Aligned_cols=64 Identities=19% Similarity=0.215 Sum_probs=35.1
Q ss_pred cCcEEEEECCCCeEEeecCC-CCCCCCceeeEEEEEC--CEEEEEcCccCCccceeceeeEEEcCCCc-----EEEeec
Q psy8877 84 CPDLVYLDLKYFTWIRPNTT-GSVPVGRRSHSAFVYG--DGLYIFGGYNGLVEEHYNDIYRYCTRRQE-----WARVIP 154 (180)
Q Consensus 84 ~~~~~~~d~~~~~w~~~~~~-~~~~~~r~~~~~~~~~--~~i~v~GG~~~~~~~~~~~~~~~d~~~~~-----W~~~~~ 154 (180)
.+.+.++|..+++-...... +..|.+..+.. .... +.+|+..-..+ ..+..+|..+.+ |+.+..
T Consensus 363 sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~-~~~p~~g~v~~t~~~g~------~~Vsvid~~~~~~~~~~~kvv~~ 434 (567)
T 1qks_A 363 RNKLVVIDTKEGKLVAIEDTGGQTPHPGRGAN-FVHPTFGPVWATSHMGD------DSVALIGTDPEGHPDNAWKILDS 434 (567)
T ss_dssp GTEEEEEETTTTEEEEEEECSSSSBCCTTCEE-EEETTTEEEEEEEBSSS------SEEEEEECCTTTCTTTBTSEEEE
T ss_pred CCeEEEEECCCCcEEEEEeccCcCCCCcccee-eECCCCCcEEEeCCCCC------CeEEEecCCCCCCccccCEEEEE
Confidence 47799999998875443333 44555422222 2332 45666542222 257777776533 766554
No 102
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=27.57 E-value=1.8e+02 Score=21.18 Aligned_cols=54 Identities=13% Similarity=0.137 Sum_probs=28.1
Q ss_pred CcEEEEECCCCeEEeecCCCCCCCCceeeEEEEECCEEEEEcCccCCccceeceeeEEEcCCCcEE
Q psy8877 85 PDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWA 150 (180)
Q Consensus 85 ~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~W~ 150 (180)
..+..||..+.+-...-. + . .. ...+...++..++.|+.+. .+..||+.+.+-.
T Consensus 299 ~~i~i~d~~~~~~~~~~~-~-~-~~--~v~~~~~~~~~l~~~~~dg-------~i~vwd~~~~~~~ 352 (445)
T 2ovr_B 299 TSIRVWDVETGNCIHTLT-G-H-QS--LTSGMELKDNILVSGNADS-------TVKIWDIKTGQCL 352 (445)
T ss_dssp SCEEEEETTTCCEEEEEC-C-C-CS--CEEEEEEETTEEEEEETTS-------CEEEEETTTCCEE
T ss_pred CeEEEEECCCCCEEEEEc-C-C-cc--cEEEEEEeCCEEEEEeCCC-------eEEEEECCCCcEE
Confidence 447788887765443211 1 1 11 1122334555666665433 5778888766543
No 103
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=27.23 E-value=1.4e+02 Score=19.98 Aligned_cols=62 Identities=10% Similarity=-0.048 Sum_probs=30.6
Q ss_pred CcEEEEECCCCeEEeecCCCCCCCC-ceeeEEEE--ECCEEEEEcCccCCccceeceeeEEEcCCCcEEEe
Q psy8877 85 PDLVYLDLKYFTWIRPNTTGSVPVG-RRSHSAFV--YGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARV 152 (180)
Q Consensus 85 ~~~~~~d~~~~~w~~~~~~~~~~~~-r~~~~~~~--~~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~W~~~ 152 (180)
..+.+||++......+...+..+.. ..-+..+. -++++|+..... ...+.+||........+
T Consensus 51 ~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~------~~~i~~~d~~g~~~~~~ 115 (286)
T 1q7f_A 51 HRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSP------THQIQIYNQYGQFVRKF 115 (286)
T ss_dssp TEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGG------GCEEEEECTTSCEEEEE
T ss_pred CEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCC------CCEEEEECCCCcEEEEe
Confidence 5588898886554444321111111 11123333 257888875321 12577888554443333
No 104
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=26.93 E-value=1.6e+02 Score=20.34 Aligned_cols=57 Identities=4% Similarity=-0.052 Sum_probs=30.3
Q ss_pred CcEEEEECCCCeEEeecCCCCCCCCceeeEEEEE--CCEEEEEcCccCCccceeceeeEEEcCCCcEEEe
Q psy8877 85 PDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVY--GDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARV 152 (180)
Q Consensus 85 ~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~W~~~ 152 (180)
..+..||+.+.+-...-. ... .... ++... ++.+++.|+.+. .+..||+.+.+....
T Consensus 95 g~i~v~d~~~~~~~~~~~--~~~-~~i~-~~~~~~~~~~~l~s~~~dg-------~i~iwd~~~~~~~~~ 153 (366)
T 3k26_A 95 GIIRIINPITMQCIKHYV--GHG-NAIN-ELKFHPRDPNLLLSVSKDH-------ALRLWNIQTDTLVAI 153 (366)
T ss_dssp CEEEEECTTTCCEEEEEE--SCC-SCEE-EEEECSSCTTEEEEEETTS-------CEEEEETTTTEEEEE
T ss_pred CEEEEEEchhceEeeeec--CCC-CcEE-EEEECCCCCCEEEEEeCCC-------eEEEEEeecCeEEEE
Confidence 357788887665433211 011 1111 22222 456777766543 578888887765544
No 105
>3dqy_A Toluene 1,2-dioxygenase system ferredoxin subunit; rieske, iron-sulfur cluster, 2Fe-2S, aromatic hydrocarbons catabolism, electron transport; 1.20A {Pseudomonas putida} SCOP: b.33.1.0 PDB: 4emj_B*
Probab=26.23 E-value=98 Score=17.73 Aligned_cols=34 Identities=12% Similarity=0.244 Sum_probs=21.9
Q ss_pred eeEEEcCCCcEEEeecCCCCCCCCcceeEEEECCEEEE
Q psy8877 139 IYRYCTRRQEWARVIPHGAPPTKRRRQSCIIKGDTLIM 176 (180)
Q Consensus 139 ~~~~d~~~~~W~~~~~~~~~~~~r~~~~~~~~~~~i~~ 176 (180)
-++||+.+.+....+.. .+...+.+..-++.|++
T Consensus 65 g~~Fdl~~G~~~~~P~~----~~L~~~~v~~~~g~v~v 98 (106)
T 3dqy_A 65 FGKFCVRTGKVKALPAC----KPIKVFPIKVEGDEVHV 98 (106)
T ss_dssp CCEEETTTCCEEETTCC----SCCCEECEEEETTEEEE
T ss_pred CCEEeCCCCCEeCCCCC----CCccEEEEEEECCEEEE
Confidence 47899888888776542 23334455556787776
No 106
>2lyd_A Decapping protein 1; DCP1, XRN1, transcription-protein binding complex; NMR {Drosophila melanogaster}
Probab=26.22 E-value=43 Score=20.79 Aligned_cols=21 Identities=14% Similarity=0.411 Sum_probs=17.0
Q ss_pred eeceeeEEEcCCCcEEEeecC
Q psy8877 135 HYNDIYRYCTRRQEWARVIPH 155 (180)
Q Consensus 135 ~~~~~~~~d~~~~~W~~~~~~ 155 (180)
....+|.||..++.|++....
T Consensus 36 ~~v~vY~f~~~~~~W~K~~iE 56 (134)
T 2lyd_A 36 SHVAFYTFNSSQNEWEKTDVE 56 (134)
T ss_dssp EEEEEEEEETTTTEEEEEEEE
T ss_pred CeEEEEEecCCcCceeEcCCc
Confidence 455789999999999997654
No 107
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=26.16 E-value=1.6e+02 Score=20.04 Aligned_cols=57 Identities=14% Similarity=0.094 Sum_probs=30.1
Q ss_pred CcEEEEECCCCeEEeecCCCCCCCCceeeEEEEE-CCEEEEEcCccCCccceeceeeEEEcCCCcEEEe
Q psy8877 85 PDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVY-GDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARV 152 (180)
Q Consensus 85 ~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~W~~~ 152 (180)
..+..||..+.+...... ....... +.+.. +++.++.++.+. .+..||+.+.+-...
T Consensus 163 g~v~~~d~~~~~~~~~~~---~~~~~i~-~~~~~~~~~~l~~~~~dg-------~i~~~d~~~~~~~~~ 220 (337)
T 1gxr_A 163 GNIAVWDLHNQTLVRQFQ---GHTDGAS-CIDISNDGTKLWTGGLDN-------TVRSWDLREGRQLQQ 220 (337)
T ss_dssp SCEEEEETTTTEEEEEEC---CCSSCEE-EEEECTTSSEEEEEETTS-------EEEEEETTTTEEEEE
T ss_pred CcEEEEeCCCCceeeeee---cccCceE-EEEECCCCCEEEEEecCC-------cEEEEECCCCceEee
Confidence 457888888776554321 1111121 22222 555666665432 577888877654433
No 108
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=25.54 E-value=1.6e+02 Score=19.97 Aligned_cols=56 Identities=9% Similarity=-0.003 Sum_probs=29.0
Q ss_pred CcEEEEECCCCeEEeecCCCCCCCCceeeEEEEECCEEEEEcCccCCccceeceeeEEEcCCCcEEE
Q psy8877 85 PDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWAR 151 (180)
Q Consensus 85 ~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~W~~ 151 (180)
..+..||..+.+-..+.. .. ......+..-++++++.++.+. .+..||+.+.+-..
T Consensus 246 ~~i~~~~~~~~~~~~~~~---~~-~~v~~~~~~~~~~~l~~~~~dg-------~i~~~~~~~~~~~~ 301 (337)
T 1gxr_A 246 SNVEVLHVNKPDKYQLHL---HE-SCVLSLKFAYCGKWFVSTGKDN-------LLNAWRTPYGASIF 301 (337)
T ss_dssp SCEEEEETTSSCEEEECC---CS-SCEEEEEECTTSSEEEEEETTS-------EEEEEETTTCCEEE
T ss_pred CcEEEEECCCCCeEEEcC---Cc-cceeEEEECCCCCEEEEecCCC-------cEEEEECCCCeEEE
Confidence 447778877765444321 11 1111112222466666665432 57788887766553
No 109
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=25.33 E-value=1.3e+02 Score=20.98 Aligned_cols=8 Identities=38% Similarity=1.348 Sum_probs=4.7
Q ss_pred CCEEEEEc
Q psy8877 60 DGRMYIWG 67 (180)
Q Consensus 60 ~~~lyv~G 67 (180)
++++|.+|
T Consensus 236 ~g~v~~wG 243 (282)
T 3qhy_B 236 NGKVIAWG 243 (282)
T ss_dssp TTEEEEES
T ss_pred CCEEEEec
Confidence 55666665
No 110
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=24.08 E-value=2.6e+02 Score=21.84 Aligned_cols=62 Identities=10% Similarity=0.126 Sum_probs=33.8
Q ss_pred CcEEEEECCCCeEEeecCCCCCCCCceeeEEEEE-CCEEEEEcCccCCccceeceeeEEEcCCCcEEEeecC
Q psy8877 85 PDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVY-GDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPH 155 (180)
Q Consensus 85 ~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~ 155 (180)
..++..|........+.. .+..+.-|..... +++.+++.-. ..+.+.++|+++.+-...-..
T Consensus 320 g~v~~vd~~~~~~~~v~~---i~~~~~~~d~~~~pdgr~~~va~~------~sn~V~ViD~~t~kl~~~i~v 382 (567)
T 1qks_A 320 GKILLVDYTDLNNLKTTE---ISAERFLHDGGLDGSHRYFITAAN------ARNKLVVIDTKEGKLVAIEDT 382 (567)
T ss_dssp TEEEEEETTCSSEEEEEE---EECCSSEEEEEECTTSCEEEEEEG------GGTEEEEEETTTTEEEEEEEC
T ss_pred CeEEEEecCCCccceeee---eeccccccCceECCCCCEEEEEeC------CCCeEEEEECCCCcEEEEEec
Confidence 567777776654433322 2334455554443 4454333221 234788999999876654444
No 111
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=23.99 E-value=2.7e+02 Score=21.99 Aligned_cols=75 Identities=11% Similarity=0.060 Sum_probs=40.6
Q ss_pred CcEEEEECCCCe--EEeecCCCCCCCCceeeEEEEECCEEEEEcCccCCccceeceeeEEEcCCC--cEEEeecCCCCCC
Q psy8877 85 PDLVYLDLKYFT--WIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQ--EWARVIPHGAPPT 160 (180)
Q Consensus 85 ~~~~~~d~~~~~--w~~~~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~d~~~~--~W~~~~~~~~~~~ 160 (180)
..+..+|+.+.+ |+.... .+......+.-++.+|+ |. .+ ..+..||.++. .|+.-.. .
T Consensus 453 G~l~A~D~~tG~~~W~~~~~-----~~~~~g~~~tagg~vf~-gt-~d------g~l~A~D~~tG~~lW~~~l~-----~ 514 (599)
T 1w6s_A 453 GQIKAYNAITGDYKWEKMER-----FAVWGGTMATAGDLVFY-GT-LD------GYLKARDSDTGDLLWKFKIP-----S 514 (599)
T ss_dssp EEEEEECTTTCCEEEEEEES-----SCCCSBCEEETTTEEEE-EC-TT------SEEEEEETTTCCEEEEEECS-----S
T ss_pred CeEEEEECCCCCEEeEecCC-----CCccCcceEecCCEEEE-EC-CC------CeEEEEECCCCCEEEEeeCC-----C
Confidence 467888988774 877421 12223334445677776 32 22 26889998776 4665222 1
Q ss_pred CCcceeEE-EECCEEEEE
Q psy8877 161 KRRRQSCI-IKGDTLIMF 177 (180)
Q Consensus 161 ~r~~~~~~-~~~~~i~~~ 177 (180)
......++ ..+++.||.
T Consensus 515 g~~~~P~~y~~~G~qyv~ 532 (599)
T 1w6s_A 515 GAIGYPMTYTHKGTQYVA 532 (599)
T ss_dssp CCCSCCEEEEETTEEEEE
T ss_pred CcEeccEEEEeCCEEEEE
Confidence 22222233 268887764
No 112
>3gce_A Ferredoxin component of carbazole 1,9A- dioxygenase; rieske ferredoxin, 2Fe-2S, electron transfer, oxidoreductase; 2.00A {Nocardioides aromaticivorans}
Probab=23.59 E-value=1.2e+02 Score=17.94 Aligned_cols=36 Identities=11% Similarity=0.148 Sum_probs=22.2
Q ss_pred eeeEEEcCCCcEEEeecCCCCCCCCcceeEEEECCEEEEE
Q psy8877 138 DIYRYCTRRQEWARVIPHGAPPTKRRRQSCIIKGDTLIMF 177 (180)
Q Consensus 138 ~~~~~d~~~~~W~~~~~~~~~~~~r~~~~~~~~~~~i~~~ 177 (180)
--++||+.+.+....+.. .+.....+..-++.|++-
T Consensus 75 Hg~~Fdl~tG~~~~~P~~----~~L~~~~v~v~~g~V~v~ 110 (121)
T 3gce_A 75 HVGRFDVRTGAPTALPCV----LPVRAYDVVVDGTEILVA 110 (121)
T ss_dssp TCCEEETTTCCEEETTCC----SCCCBCCEEEETTEEEEC
T ss_pred CCCEEcCCCccEeCCCCc----CCcceEEEEEECCEEEEE
Confidence 357889888887765543 223334455567887763
No 113
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=22.40 E-value=2e+02 Score=19.99 Aligned_cols=55 Identities=9% Similarity=-0.020 Sum_probs=28.9
Q ss_pred CcEEEEECCCCeEEeecCCCCCCCCceeeEEEE-ECCEEEEEcCccCCccceeceeeEEEcCCCcE
Q psy8877 85 PDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFV-YGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEW 149 (180)
Q Consensus 85 ~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~W 149 (180)
..+..||+.+.+-..... .....+ . .+++. -++.+++.|+.+. .+..||+.+.+.
T Consensus 149 g~i~~wd~~~~~~~~~~~-~~~~~~-i-~~~~~~pdg~~lasg~~dg-------~i~iwd~~~~~~ 204 (343)
T 3lrv_A 149 GTIGFQSYEDDSQYIVHS-AKSDVE-Y-SSGVLHKDSLLLALYSPDG-------ILDVYNLSSPDQ 204 (343)
T ss_dssp CCEEEEESSSSCEEEEEC-CCSSCC-C-CEEEECTTSCEEEEECTTS-------CEEEEESSCTTS
T ss_pred CcEEEEECCCCcEEEEEe-cCCCCc-e-EEEEECCCCCEEEEEcCCC-------EEEEEECCCCCC
Confidence 457888988877654421 111111 1 22222 2566777766543 466677666543
No 114
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=22.33 E-value=2.3e+02 Score=20.71 Aligned_cols=15 Identities=40% Similarity=0.474 Sum_probs=11.6
Q ss_pred eeEEEeCCEEEEEcc
Q psy8877 16 HAAVLNDNKIFTFGG 30 (180)
Q Consensus 16 ~~~~~~~~~iy~~GG 30 (180)
-+++.+++++|+|=|
T Consensus 184 DAv~~~~g~~~fFkg 198 (365)
T 3ba0_A 184 DAVTTVGNKIFFFKD 198 (365)
T ss_dssp SCEEEETTEEEEEET
T ss_pred eeEEEcCCeEEEEeC
Confidence 355667899999987
No 115
>3kvp_A Uncharacterized protein YMZC; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.40A {Bacillus subtilis}
Probab=22.18 E-value=91 Score=16.79 Aligned_cols=16 Identities=0% Similarity=-0.332 Sum_probs=13.1
Q ss_pred CcEEEEECCCCeEEee
Q psy8877 85 PDLVYLDLKYFTWIRP 100 (180)
Q Consensus 85 ~~~~~~d~~~~~w~~~ 100 (180)
-.|++||++++.-+-+
T Consensus 40 iKIykyde~tNeI~Lk 55 (72)
T 3kvp_A 40 IKIYEYNESRNEVKLK 55 (72)
T ss_dssp EEEEEEETTTTEEEEE
T ss_pred EEEEEeCCCCCeEEEE
Confidence 5689999999987655
No 116
>1q67_A Decapping protein involved in mRNA degradation- DCP1P; beta sandwich, transcription; 2.30A {Saccharomyces cerevisiae} SCOP: b.55.1.7
Probab=22.16 E-value=80 Score=21.39 Aligned_cols=21 Identities=14% Similarity=0.498 Sum_probs=17.3
Q ss_pred ceeceeeEEEcCCCcEEEeec
Q psy8877 134 EHYNDIYRYCTRRQEWARVIP 154 (180)
Q Consensus 134 ~~~~~~~~~d~~~~~W~~~~~ 154 (180)
.....+|.||.++++|.+...
T Consensus 41 t~hasvYkfd~~~~eW~K~~~ 61 (231)
T 1q67_A 41 TPHASLYKWDFKKDEWNKLEY 61 (231)
T ss_dssp EEEEEEEEEETTTTEEEEEEE
T ss_pred CCeEEEEEecCCCCceEecCc
Confidence 356689999999999999763
No 117
>2w8x_A ION-channel modulator raklp; salivary gland, kunitz domains, maxik channel activation, sulphur SAD, membrane protein; 1.60A {Rhipicephalus appendiculatus}
Probab=21.63 E-value=89 Score=15.94 Aligned_cols=21 Identities=19% Similarity=0.294 Sum_probs=17.0
Q ss_pred eeceeeEEEcCCCcEEEeecC
Q psy8877 135 HYNDIYRYCTRRQEWARVIPH 155 (180)
Q Consensus 135 ~~~~~~~~d~~~~~W~~~~~~ 155 (180)
..+.+|.|++.++..+.-.-.
T Consensus 27 hsdqlwhynlrtnrcerggyr 47 (72)
T 2w8x_A 27 HSDQLWHYNLRTNRCERGGYR 47 (72)
T ss_dssp EEEEEEEEETTTTEEEEEEET
T ss_pred cchhhhhhhcccchhccCCcc
Confidence 456899999999999886554
No 118
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=21.61 E-value=2.9e+02 Score=21.45 Aligned_cols=61 Identities=11% Similarity=-0.052 Sum_probs=37.3
Q ss_pred CcEEEEECCCCeEEeecCCCCCCCCceeeEE-EEECCEEEEEcCccCCccceeceeeEEEcCCCcEEEeec
Q psy8877 85 PDLVYLDLKYFTWIRPNTTGSVPVGRRSHSA-FVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIP 154 (180)
Q Consensus 85 ~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~-~~~~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~ 154 (180)
..++.+|..+.....+.. +.... ... ...++.+++..+... ....++.+|+.+.+.+.+..
T Consensus 316 ~~l~~~d~~~~~~~~l~~----~~~~~-~~~~s~~~~~~~~~~~~~~----~~~~i~~~d~~~g~~~~l~~ 377 (662)
T 3azo_A 316 AVLGILDPESGELVDAAG----PWTEW-AATLTVSGTRAVGVAASPR----TAYEVVELDTVTGRARTIGA 377 (662)
T ss_dssp CEEEEEETTTTEEEECCS----SCCEE-EEEEEEETTEEEEEEEETT----EEEEEEEEETTTCCEEEEES
T ss_pred cEEEEEECCCCcEEEecC----CCCeE-EEEEecCCCEEEEEEcCCC----CCCEEEEEECCCCceEEeec
Confidence 678888998888777642 12212 122 334556655543322 24578899998888888754
No 119
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=21.28 E-value=1.3e+02 Score=21.62 Aligned_cols=52 Identities=10% Similarity=0.129 Sum_probs=22.8
Q ss_pred CcEEEEECCCC--eEEeecCCCCCCCCceeeEEEEECCEEEEEcCccCCccceeceeeEEEcCCC--cEE
Q psy8877 85 PDLVYLDLKYF--TWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQ--EWA 150 (180)
Q Consensus 85 ~~~~~~d~~~~--~w~~~~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~d~~~~--~W~ 150 (180)
..++.+|..+. .|+.-. +.. ..+.+..++++|+.+..+. .++.+|.++. .|+
T Consensus 19 g~v~a~d~~tG~~~W~~~~--~~~-----~s~p~~~~g~~~v~~s~dg-------~l~a~d~~tG~~~w~ 74 (369)
T 2hz6_A 19 GSLHAVSKRTGSIKWTLKE--DPV-----LQVPTHVEEPAFLPDPNDG-------SLYTLGSKNNEGLTK 74 (369)
T ss_dssp SEEEEEETTTCCEEEEEEC--CCS-----CCCC-----CCEEECTTTC-------CEEEC-----CCSEE
T ss_pred CEEEEEECCCCCEEEEecC--CCc-----eecceEcCCCEEEEeCCCC-------EEEEEECCCCceeee
Confidence 45888897766 476542 111 1122344566777654322 4777777543 454
No 120
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=21.15 E-value=2.8e+02 Score=21.18 Aligned_cols=48 Identities=13% Similarity=0.080 Sum_probs=29.9
Q ss_pred CCEEEEEcCccCCccceeceeeEEEcCCCcEEEeecCCCCCCCCcceeEEEECCEEEEEcC
Q psy8877 119 GDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPHGAPPTKRRRQSCIIKGDTLIMFGG 179 (180)
Q Consensus 119 ~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~r~~~~~~~~~~~i~~~GG 179 (180)
++++|+|-|. ..|+||..+.+...-.=.+ .+. .-++...++.+|+|-|
T Consensus 158 ~~~~yfFkG~---------~yw~yd~~~~~~~~~~w~g---i~~-iDAA~~~~g~~YfFkG 205 (460)
T 1qhu_A 158 DEGILFFQGN---------RKWFWDLTTGTKKERSWPA---VGN-CTSALRWLGRYYCFQG 205 (460)
T ss_dssp SSEEEEEETT---------EEEEEETTTTEEEEECCTT---SCC-CSEEEEETTEEEEEET
T ss_pred CCeEEEEecc---------cEEEEecccceeecccCCC---CCc-cchheeeCCceEEEEC
Confidence 5778887552 5789998887655322222 222 2345556789998876
No 121
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=20.56 E-value=2.2e+02 Score=19.77 Aligned_cols=77 Identities=9% Similarity=0.047 Sum_probs=42.8
Q ss_pred CEEEEEcCCCCCCCcccCCCceecCcEEEEECCCCeEEeecCCCCCCCCceeeEEEEECCEEEEEcCccCCccceeceee
Q psy8877 61 GRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIY 140 (180)
Q Consensus 61 ~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~ 140 (180)
+.||+.... ...+.+||+++.+....-... .....-...+...+.++...|...-.+.....+.
T Consensus 208 g~l~v~d~~--------------~~~I~~~~~~~G~~~~~~~~~--~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~ 271 (329)
T 3fvz_A 208 DQLCVADRE--------------NGRIQCFKTDTKEFVREIKHA--SFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGF 271 (329)
T ss_dssp TEEEEEETT--------------TTEEEEEETTTCCEEEEECCT--TTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEE
T ss_pred CEEEEEECC--------------CCEEEEEECCCCcEEEEEecc--ccCCCcceeeecCCEEEEeCCCEEeccCCCcEEE
Confidence 688887532 256889999866554432111 1111111333445677777665332223345788
Q ss_pred EEEcCCCcEEEee
Q psy8877 141 RYCTRRQEWARVI 153 (180)
Q Consensus 141 ~~d~~~~~W~~~~ 153 (180)
.+|+.+.+....-
T Consensus 272 ~~~~~~g~~~~~~ 284 (329)
T 3fvz_A 272 VMNFSSGEIIDVF 284 (329)
T ss_dssp EEETTTCCEEEEE
T ss_pred EEEcCCCeEEEEE
Confidence 9998888766653
No 122
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=20.52 E-value=2.2e+02 Score=19.60 Aligned_cols=58 Identities=9% Similarity=-0.169 Sum_probs=30.0
Q ss_pred CcEEEEECCCCeEEeecCCCCCCCCceeeEEEEE-CCEEEEEcCccCCccceeceeeEEEcCCCcEEEee
Q psy8877 85 PDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVY-GDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVI 153 (180)
Q Consensus 85 ~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~W~~~~ 153 (180)
..+.++|..+.+-...-. ....... +++.. +++.++.++.+. .+..||+.+.+.....
T Consensus 54 g~i~vwd~~~~~~~~~~~---~h~~~v~-~~~~~~~~~~l~s~~~dg-------~i~iwd~~~~~~~~~~ 112 (369)
T 3zwl_B 54 SSASVWYSLNGERLGTLD---GHTGTIW-SIDVDCFTKYCVTGSADY-------SIKLWDVSNGQCVATW 112 (369)
T ss_dssp SCEEEEETTTCCEEEEEC---CCSSCEE-EEEECTTSSEEEEEETTT-------EEEEEETTTCCEEEEE
T ss_pred CEEEEEeCCCchhhhhhh---hcCCcEE-EEEEcCCCCEEEEEeCCC-------eEEEEECCCCcEEEEe
Confidence 347788877765444321 1111111 22222 466666665433 5778888776655443
No 123
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=20.07 E-value=2.5e+02 Score=20.26 Aligned_cols=55 Identities=11% Similarity=-0.057 Sum_probs=27.5
Q ss_pred CcEEEEECCCCeEEeecCCCCCCCCceeeEEEEECCEEEEEcCccCCccceeceeeEEEcCCCcE
Q psy8877 85 PDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEW 149 (180)
Q Consensus 85 ~~~~~~d~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~d~~~~~W 149 (180)
..+.++|..+.+....-. .........+..-++++++.|+.+. .+..||+.+...
T Consensus 130 g~i~vwd~~~~~~~~~l~---~h~~~V~~v~~~~~~~~l~sgs~D~-------~i~iwd~~~~~~ 184 (410)
T 1vyh_C 130 ATIKVWDYETGDFERTLK---GHTDSVQDISFDHSGKLLASCSADM-------TIKLWDFQGFEC 184 (410)
T ss_dssp SCEEEEETTTCCCCEEEC---CCSSCEEEEEECTTSSEEEEEETTS-------CCCEEETTSSCE
T ss_pred CeEEEEECCCCcEEEEEe---ccCCcEEEEEEcCCCCEEEEEeCCC-------eEEEEeCCCCce
Confidence 457788887765433211 1111111111122566777776544 466777766543
Done!