RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy8877
(180 letters)
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A
{Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Length = 695
Score = 86.0 bits (212), Expect = 4e-20
Identities = 25/199 (12%), Positives = 49/199 (24%), Gaps = 23/199 (11%)
Query: 1 MHWTVHLTGGPRRVNHAAV-LNDNKIFTFGGYCSGEDYV---------KRRPMDGEPPSY 50
W++ + R H+A L D + GG G + K E
Sbjct: 478 REWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQN 537
Query: 51 RDFHTA---NIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVP 107
+ + + I GG + + + ++ D +
Sbjct: 538 SLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDA---ENATEPITVIKKLQHPL 594
Query: 108 VGRRSHSA-FVYGDGLYIFGGYNG-LVEEHYNDIYRYCTRRQEWARVIPHGAPPTKRRRQ 165
R ++ L I GG + + + N I + +
Sbjct: 595 FQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLTSIPISRRIWEDHSLM 654
Query: 166 -----SCIIKGDTLIMFGG 179
T+ + GG
Sbjct: 655 LAGFSLVSTSMGTIHIIGG 673
Score = 82.5 bits (203), Expect = 6e-19
Identities = 24/192 (12%), Positives = 52/192 (27%), Gaps = 37/192 (19%)
Query: 11 PRRVNHAAVL--NDNKIFTFGGYCSGEDYVK------------RRPMDGEPPSYRDFHTA 56
R+ H +N++ GG + + R H+A
Sbjct: 438 VARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHT--RFRHSA 495
Query: 57 NII-DGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSA 115
+ DG + I GG + ++ ++ + +
Sbjct: 496 CSLPDGNVLILGGVTEGPAML------------LYNVTEEIFKDVTPKDEFFQNSLVSAG 543
Query: 116 FVYG----DGLYIFGGYNG---LVEEHYNDIYRYCTRRQEWARVIPHGAPPTKRRR-QSC 167
+ G+ + GG+ + ++ Y + + P +R Q
Sbjct: 544 LEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIK 603
Query: 168 IIKGDTLIMFGG 179
I L++ GG
Sbjct: 604 YITPRKLLIVGG 615
Score = 77.1 bits (189), Expect = 4e-17
Identities = 26/150 (17%), Positives = 54/150 (36%), Gaps = 20/150 (13%)
Query: 37 YVKRRPMDGEPPSYRDFHTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFT 96
+ ++ E P R F ++ ++ GG +++ L + Y
Sbjct: 374 DEDYQLLECECPINRKFGDVDVAGNDVFYMGGSNPYRVN----------EILQLSIHYDK 423
Query: 97 WIRPN---TTGSVPVGRRSHSAFVYGDG--LYIFGGYNGLVEEHYNDIYRYCTRRQEWAR 151
N ++ VPV R H+ L + GG + +D + + + +EW+
Sbjct: 424 IDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKA-PHQGLSDNWIFDMKTREWSM 482
Query: 152 VIPHGAPPTKRRRQS-CIIKGDTLIMFGGS 180
+ + R R S C + +++ GG
Sbjct: 483 I---KSLSHTRFRHSACSLPDGNVLILGGV 509
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid
metabolism, kelch repeat, beta-propeller; HET: MSE;
1.50A {Escherichia coli}
Length = 357
Score = 76.1 bits (187), Expect = 5e-17
Identities = 29/157 (18%), Positives = 51/157 (32%), Gaps = 22/157 (14%)
Query: 13 RVNHAAVLNDNKIFTFGGYCSGEDYV-----------KRRPMDGEPPSYRDFHTANIIDG 61
+ ++++ ++ G Y G P RD T+ IDG
Sbjct: 10 FKSGTGAIDNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGP---RDQATSAFIDG 66
Query: 62 RMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYGDG 121
+Y++GG G S G D+ + K +W++ P+G H FV+
Sbjct: 67 NLYVFGGIGKNSE----GLTQVFNDVHKYNPKTNSWVK--LMSHAPMGMAGHVTFVHNGK 120
Query: 122 LYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPHGAP 158
Y+ GG N ++ + A
Sbjct: 121 AYVTGGVNQ--NIFNGYFEDLNEAGKDSTAIDKINAH 155
Score = 65.0 bits (158), Expect = 4e-13
Identities = 28/136 (20%), Positives = 46/136 (33%), Gaps = 20/136 (14%)
Query: 48 PSYRDFHTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVP 107
P T I + +YI G G+ Y D K W + P
Sbjct: 7 PVPFKSGTGAIDNDTVYIGLGSA--------GTAWYKLD---TQAKDKKW---TALAAFP 52
Query: 108 VGRRS-HSAFVYGDGLYIFGGYNGLVE---EHYNDIYRYCTRRQEWARVIPHGAPPTKRR 163
G R ++ LY+FGG E + +ND+++Y + W +++ H P
Sbjct: 53 GGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSH--APMGMA 110
Query: 164 RQSCIIKGDTLIMFGG 179
+ + GG
Sbjct: 111 GHVTFVHNGKAYVTGG 126
Score = 63.0 bits (153), Expect = 2e-12
Identities = 29/212 (13%), Positives = 55/212 (25%), Gaps = 44/212 (20%)
Query: 10 GPRRVNHAAVLNDNKIFTFGGYCSGEDYVKRRPMDGE---------------PPSYRDFH 54
G R + D ++ FGG + + + D P H
Sbjct: 53 GGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGH 112
Query: 55 TANIIDGRMYIWGGRGDESSLYHSGSEVYCP------DLVYLDLKYF----TWIRPNTT- 103
+ +G+ Y+ GG ++ E + ++ YF N
Sbjct: 113 VTFVHNGKAYVTGGVNQNI--FNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFL 170
Query: 104 -------------GSVPVGRRS-HSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEW 149
G P + + GD ++ G + ++
Sbjct: 171 LSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPG-LRTDAVFELDFTGNNL 229
Query: 150 A-RVIPHGAPPTKRRRQSCIIKGDTLIMFGGS 180
+ + P I D+LI GG+
Sbjct: 230 KWNKLAPVSSPDGVAGGFAGISNDSLIFAGGA 261
Score = 58.0 bits (140), Expect = 1e-10
Identities = 19/152 (12%), Positives = 34/152 (22%), Gaps = 20/152 (13%)
Query: 10 GPRRVNHAAVLNDNKIFTFGGYCSG-------EDYVKRRPM-------DGEPPSYRDFHT 55
A V +K + G + P
Sbjct: 188 WYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGF 247
Query: 56 ANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNT-----TGSVPVGR 110
A I + + GG G + S + + + +G + GR
Sbjct: 248 AGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGR 307
Query: 111 RSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRY 142
+ + + L I GG + D
Sbjct: 308 AYGVSLPWNNSLLIIGGETA-GGKAVTDSVLI 338
Score = 46.5 bits (110), Expect = 1e-06
Identities = 16/81 (19%), Positives = 29/81 (35%), Gaps = 10/81 (12%)
Query: 101 NTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYC--TRRQEWARVIPHGAP 158
+ PV +S + + D +YI G G Y+ + ++W + P
Sbjct: 1 SVLPETPVPFKSGTGAIDNDTVYIGLGSAG------TAWYKLDTQAKDKKWTALAA--FP 52
Query: 159 PTKRRRQSCIIKGDTLIMFGG 179
R + + L +FGG
Sbjct: 53 GGPRDQATSAFIDGNLYVFGG 73
Score = 41.9 bits (98), Expect = 5e-05
Identities = 21/149 (14%), Positives = 37/149 (24%), Gaps = 25/149 (16%)
Query: 47 PPSYRDFHTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSV 106
P + ++ G E+ V+ + W + S
Sbjct: 187 PWYGTAGAAVVNKGDKTWLING---EAKPGLRTDAVFE---LDFTGNNLKWNKLAPV-SS 239
Query: 107 PVGRRSHSAFVYGDGLYIFGGYN----------GLVEEHY-----NDIYRYCTRRQEWAR 151
P G A + D L GG G H + +W +
Sbjct: 240 PDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDK 299
Query: 152 VIPHGAPPTKRRRQSCIIKGDTLIMFGGS 180
G R + ++L++ GG
Sbjct: 300 S---GELSQGRAYGVSLPWNNSLLIIGGE 325
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo
sapiens}
Length = 302
Score = 68.1 bits (167), Expect = 3e-14
Identities = 36/183 (19%), Positives = 52/183 (28%), Gaps = 34/183 (18%)
Query: 12 RRVNHAAVLNDNKIFTFGGYCSGEDY-------------VKRRPMDGEPPSYRDFHTANI 58
RR V +F GG+ M R A +
Sbjct: 51 RRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANM----RDRRSTLGAAV 106
Query: 59 IDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVY 118
++G +Y GG + L S E Y W + R S V
Sbjct: 107 LNGLLYAVGGFDGSTGL--SSVEAYNIKS-------NEWF---HVAPMNTRRSSVGVGVV 154
Query: 119 GDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPHGAP-PTKRRRQSCIIKGDTLIMF 177
G LY GGY+ + + + Y EW + A T+R + + L
Sbjct: 155 GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYI----AEMSTRRSGAGVGVLNNLLYAV 210
Query: 178 GGS 180
GG
Sbjct: 211 GGH 213
Score = 64.2 bits (157), Expect = 6e-13
Identities = 35/182 (19%), Positives = 53/182 (29%), Gaps = 34/182 (18%)
Query: 12 RRVNHAAVLNDNKIFTFGGY------CSGE--DYVKRR-----PMDGEPPSYRDFHTANI 58
RR A + + ++ GG+ S E + PM + R +
Sbjct: 98 RRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPM----NTRRSSVGVGV 153
Query: 59 IDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVY 118
+ G +Y GG S S E Y + W + R V
Sbjct: 154 VGGLLYAVGGYDVASRQCLSTVECYNATT---N----EWT---YIAEMSTRRSGAGVGVL 203
Query: 119 GDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPHGAP-PTKRRRQSCIIKGDTLIMF 177
+ LY GG++G + Y W +V A RR L +
Sbjct: 204 NNLLYAVGGHDG--PLVRKSVEVYDPTTNAWRQV----ADMNMCRRNAGVCAVNGLLYVV 257
Query: 178 GG 179
GG
Sbjct: 258 GG 259
Score = 62.7 bits (153), Expect = 2e-12
Identities = 28/178 (15%), Positives = 48/178 (26%), Gaps = 35/178 (19%)
Query: 12 RRVNHAAVLNDNKIFTFGGY-CSGEDYVK--------------RRPMDGEPPSYRDFHTA 56
RR + + ++ GGY + + M + R
Sbjct: 145 RRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEM----STRRSGAGV 200
Query: 57 NIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAF 116
+++ +Y GG EVY P W + + RR+
Sbjct: 201 GVLNNLLYAVGGHDGPLVR--KSVEVYDPTT-------NAWR---QVADMNMCRRNAGVC 248
Query: 117 VYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPHGAPPTKRRRQSCIIKGDTL 174
LY+ GG +G + + Y +W V T R + L
Sbjct: 249 AVNGLLYVVGGDDG--SCNLASVEYYNPTTDKWTVVSSC--MSTGRSYAGVTVIDKRL 302
Score = 56.9 bits (138), Expect = 3e-10
Identities = 26/150 (17%), Positives = 43/150 (28%), Gaps = 22/150 (14%)
Query: 11 PRRVNHAAVLNDNKIFTFGGYCSGE-------DYVKRRPMDGEP-PSYRDFHTANIIDGR 62
R + + GG D+ + R PS R + G
Sbjct: 4 VRTRLRTPMNLPKLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYMAGL 63
Query: 63 MYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYGDGL 122
++ GG + V D W + ++ R + A V L
Sbjct: 64 VFAVGGFNGSLRV----RTVDS-----YDPVKDQWT---SVANMRDRRSTLGAAVLNGLL 111
Query: 123 YIFGGYNGLVEEHYNDIYRYCTRRQEWARV 152
Y GG++G + + Y + EW V
Sbjct: 112 YAVGGFDG--STGLSSVEAYNIKSNEWFHV 139
Score = 47.3 bits (113), Expect = 5e-07
Identities = 21/131 (16%), Positives = 35/131 (26%), Gaps = 20/131 (15%)
Query: 51 RDFHTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGR 110
T + M + GG+ ++ E Y W +P R
Sbjct: 6 TRLRTPMNLPKLMVVVGGQAPKAI---RSVECYDFKEE-------RWH---QVAELPSRR 52
Query: 111 RSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPHGAP-PTKRRRQSCII 169
++ GG+NG + Y + +W V A +R +
Sbjct: 53 CRAGMVYMAGLVFAVGGFNG--SLRVRTVDSYDPVKDQWTSV----ANMRDRRSTLGAAV 106
Query: 170 KGDTLIMFGGS 180
L GG
Sbjct: 107 LNGLLYAVGGF 117
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding,
cytoskeleton; 1.78A {Homo sapiens}
Length = 315
Score = 67.4 bits (165), Expect = 5e-14
Identities = 36/190 (18%), Positives = 54/190 (28%), Gaps = 42/190 (22%)
Query: 12 RRVNHAAVLNDNKIFTFGGYCSGEDYVK--------------RRPMDGEPPSYRDFHTAN 57
H + + + ++ GG S + PM + R A
Sbjct: 138 VVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPM----QTARSLFGAT 193
Query: 58 IIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFV 117
+ DGR+ + G D S +EVY W + P R S S
Sbjct: 194 VHDGRIIVAAGVTDTGLT--SSAEVYSITD-------NKW---APFEAFPQERSSLSLVS 241
Query: 118 YGDGLYIFGGYNGLVEEHY-------NDIYRYCTRRQEWARVIPHGAPPTKRRRQSCIIK 170
LY GG+ L E NDI+RY ++W V
Sbjct: 242 LVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGV-----LREIAYAAGATFL 296
Query: 171 GDTLIMFGGS 180
L + +
Sbjct: 297 PVRLNVLRLT 306
Score = 64.3 bits (157), Expect = 8e-13
Identities = 34/198 (17%), Positives = 62/198 (31%), Gaps = 40/198 (20%)
Query: 3 WTVHLTGGPRRVNHAAVLNDNKIFTFGGY------------CSGEDY-------VKRRPM 43
+ L+ + + + V +N++F GG + + P+
Sbjct: 26 YCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPL 85
Query: 44 DGEPPSYRDFHTANIIDGRMYIWGGRGDESSLYHSGS-EVYCPDLVYLDLKYFTWIRPNT 102
PS R +Y+ GGR + S Y F W
Sbjct: 86 ----PSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLS-------FKWG---E 131
Query: 103 TGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPHGAP-PTK 161
+ +P H+ + D +Y+ GG + N + Y ++ EW + AP T
Sbjct: 132 SDPLPYVVYGHTVLSHMDLVYVIGGKGS-DRKCLNKMCVYDPKKFEWKEL----APMQTA 186
Query: 162 RRRQSCIIKGDTLIMFGG 179
R + +I+ G
Sbjct: 187 RSLFGATVHDGRIIVAAG 204
Score = 45.8 bits (109), Expect = 2e-06
Identities = 19/132 (14%), Positives = 32/132 (24%), Gaps = 22/132 (16%)
Query: 12 RRVNHAAVLNDNKIFTFGGYC------SGEDY-------VKRRPMDGEPPSYRDFHTANI 58
R A ++D +I G S E Y P R +
Sbjct: 186 ARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAF----PQERSSLSLVS 241
Query: 59 IDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVY 118
+ G +Y GG + D+ + + W G + + A
Sbjct: 242 LVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKW-----EGVLREIAYAAGATFL 296
Query: 119 GDGLYIFGGYNG 130
L +
Sbjct: 297 PVRLNVLRLTKM 308
Score = 32.3 bits (74), Expect = 0.069
Identities = 10/81 (12%), Positives = 20/81 (24%), Gaps = 16/81 (19%)
Query: 12 RRVNHAAVLNDNKIFTFGGYCSGEDYVKRRPMD----------------GEPPSYRDFHT 55
R + + V ++ GG+ + E G
Sbjct: 233 ERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGVLREIAYAAG 292
Query: 56 ANIIDGRMYIWGGRGDESSLY 76
A + R+ + +LY
Sbjct: 293 ATFLPVRLNVLRLTKMAENLY 313
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding,
invasion and metastasis, UBL conjugation pathway, UBL
protein folding; 2.00A {Rattus norvegicus}
Length = 318
Score = 67.4 bits (165), Expect = 6e-14
Identities = 31/188 (16%), Positives = 61/188 (32%), Gaps = 39/188 (20%)
Query: 12 RRVNHAAVLNDNKIFTFGGY------------CSGEDY-------VKRRPMDGEPPSYRD 52
R + + V N+++ GG V P+ PS R
Sbjct: 46 PRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPL----PSARC 101
Query: 53 FHTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRS 112
+D ++Y+ G+ ++ Y P W ++P+
Sbjct: 102 LFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVA-------AKWS---EVKNLPIKVYG 151
Query: 113 HSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPHGAP-PTKRRRQSCIIKG 171
H+ + +Y GG ++ N ++ Y ++ +W + AP T R I
Sbjct: 152 HNVISHNGMIYCLGGKTDD-KKCTNRVFIYNPKKGDWKDL----APMKTPRSMFGVAIHK 206
Query: 172 DTLIMFGG 179
+++ GG
Sbjct: 207 GKIVIAGG 214
Score = 63.5 bits (155), Expect = 1e-12
Identities = 30/165 (18%), Positives = 51/165 (30%), Gaps = 37/165 (22%)
Query: 12 RRVNHAAVLNDNKIFTFGGYCSGEDYVK--------------RRPMDGEPPSYRDFHTAN 57
+ H + ++ I+ GG + PM + R
Sbjct: 148 KVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPM----KTPRSMFGVA 203
Query: 58 IIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFV 117
I G++ I GG ++ + E + W P R S S
Sbjct: 204 IHKGKIVIAGGVTEDGLS--ASVEAFDLKT-------NKWE---VMTEFPQERSSISLVS 251
Query: 118 YGDGLYIFGGYNGLVEEHY-------NDIYRYCTRRQEWARVIPH 155
LY GG+ + E NDI++Y ++EWA ++
Sbjct: 252 LAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGMLKE 296
Score = 54.7 bits (132), Expect = 2e-09
Identities = 24/163 (14%), Positives = 45/163 (27%), Gaps = 16/163 (9%)
Query: 22 DNKIFTFGGYCSGEDY---VKRRPMDGEPPSY-RDFHTANIIDGRMYIWGGRGDESSLYH 77
+ I + Y + R+ + ++Y+ GG +
Sbjct: 15 KDLILLVND-TAAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKD 73
Query: 78 SGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVEEHYN 137
+ Y L D W+ +P R D +Y+ G + E +
Sbjct: 74 QPLQSYFFQL---DNVSSEWVG---LPPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLD 127
Query: 138 DIYRYCTRRQEWARVIPHGAP-PTKRRRQSCIIKGDTLIMFGG 179
+ Y +W+ V P K + I + GG
Sbjct: 128 SVLCYDPVAAKWSEV----KNLPIKVYGHNVISHNGMIYCLGG 166
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural
genomics, structur genomics consortium, SGC, kelch
repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Length = 306
Score = 66.2 bits (162), Expect = 1e-13
Identities = 37/183 (20%), Positives = 60/183 (32%), Gaps = 33/183 (18%)
Query: 12 RRVNHAAVLNDNKIFTFGGYCSGEDYVK--------------RRPMDGEPPSYRDFHTAN 57
R + AA + KI+T GG G + + M + R H
Sbjct: 91 PRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSM----LTQRCSHGMV 146
Query: 58 IIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFV 117
+G +Y+ GG + + Y D TW + R++H
Sbjct: 147 EANGLIYVCGGSLGNNVSGRVLNSCEV----Y-DPATETWT---ELCPMIEARKNHGLVF 198
Query: 118 YGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPHGAP-PTKRRRQSCIIKGDTLIM 176
D ++ GG NG +++ Y + EW V +P P K C G + +
Sbjct: 199 VKDKIFAVGGQNG--LGGLDNVEYYDIKLNEWKMV----SPMPWKGVTVKCAAVGSIVYV 252
Query: 177 FGG 179
G
Sbjct: 253 LAG 255
Score = 66.2 bits (162), Expect = 1e-13
Identities = 36/183 (19%), Positives = 57/183 (31%), Gaps = 34/183 (18%)
Query: 12 RRVNHAAVLNDNKIFTFGGY-----CSGEDY-------VKRRPMDGEPPSYRDFHTANII 59
+R + A V DN ++ GG + Y + P+ RD A
Sbjct: 45 KRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGP----PTPRDSLAACAA 100
Query: 60 DGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYG 119
+G++Y GG + + E Y +W T S+ R SH
Sbjct: 101 EGKIYTSGGS-EVGNSALYLFECYDTRT-------ESWH---TKPSMLTQRCSHGMVEAN 149
Query: 120 DGLYIFGGYNGLVE--EHYNDIYRYCTRRQEWARVIPHGAP-PTKRRRQSCIIKGDTLIM 176
+Y+ GG G N Y + W + P R+ + D +
Sbjct: 150 GLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTEL----CPMIEARKNHGLVFVKDKIFA 205
Query: 177 FGG 179
GG
Sbjct: 206 VGG 208
Score = 61.2 bits (149), Expect = 8e-12
Identities = 28/173 (16%), Positives = 46/173 (26%), Gaps = 39/173 (22%)
Query: 12 RRVNHAAVLNDNKIFTFGGYCSGEDYVKR-----------------RPMDGEPPSYRDFH 54
+R +H V + I+ GG + PM R H
Sbjct: 139 QRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPM----IEARKNH 194
Query: 55 TANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHS 114
+ +++ GG+ L E Y L + W +P +
Sbjct: 195 GLVFVKDKIFAVGGQNGLGGL--DNVEYYDIKL---N----EW---KMVSPMPWKGVTVK 242
Query: 115 AFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPHGAPPTKRRRQSC 167
G +Y+ G+ G I Y T +W + SC
Sbjct: 243 CAAVGSIVYVLAGFQG--VGRLGHILEYNTETDKWVAN----SKVRAFPVTSC 289
Score = 49.2 bits (118), Expect = 1e-07
Identities = 35/176 (19%), Positives = 49/176 (27%), Gaps = 29/176 (16%)
Query: 11 PRRVNHAAVLNDNKIFTFGGY--CSGEDY---VKRRPMDGEPPSYRDFHTANIIDGRMYI 65
PRR H D +I FGG S + P R D +YI
Sbjct: 6 PRRKKH-----DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYI 60
Query: 66 WGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYGDGLYIF 125
GG + C ++ +W P R S +A +Y
Sbjct: 61 LGGSQLFPI-----KRMDC-----YNVVKDSWYS---KLGPPTPRDSLAACAAEGKIYTS 107
Query: 126 GGYNGLVEEHYNDIYRYCTRRQEWARVIPHGAP-PTKRRRQSCIIKGDTLIMFGGS 180
GG Y TR + W T+R + + + GGS
Sbjct: 108 GGSEV-GNSALYLFECYDTRTESWHTK----PSMLTQRCSHGMVEANGLIYVCGGS 158
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat
motif, protein binding; HET: MSE; 1.35A {Homo sapiens}
SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A
2z32_A 3ade_A
Length = 308
Score = 64.7 bits (158), Expect = 5e-13
Identities = 34/187 (18%), Positives = 50/187 (26%), Gaps = 40/187 (21%)
Query: 12 RRVNHAAVLNDNKIFTFGGYCSGEDYVKRR-----------------PMDGEPPSYRDFH 54
R A + ++ GG + D PM R+
Sbjct: 60 PRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPM----SVPRNRI 115
Query: 55 TANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHS 114
+IDG +Y GG + E Y P+ W + R
Sbjct: 116 GVGVIDGHIYAVGGSHGCIHH--NSVERYEPER-------DEWH---LVAPMLTRRIGVG 163
Query: 115 AFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPHGAP-PTKRRRQSCIIKGDT 173
V LY GG++G N Y R EW + T R + +
Sbjct: 164 VAVLNRLLYAVGGFDG--TNRLNSAECYYPERNEWRMI----TAMNTIRSGAGVCVLHNC 217
Query: 174 LIMFGGS 180
+ GG
Sbjct: 218 IYAAGGY 224
Score = 62.7 bits (153), Expect = 2e-12
Identities = 25/157 (15%), Positives = 49/157 (31%), Gaps = 33/157 (21%)
Query: 12 RRVNHAAVLNDNKIFTFGGYCSGEDYVK--------------RRPMDGEPPSYRDFHTAN 57
RR+ + + ++ GG+ G + + M + R
Sbjct: 158 RRIGVGVAVLNRLLYAVGGF-DGTNRLNSAECYYPERNEWRMITAM----NTIRSGAGVC 212
Query: 58 IIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFV 117
++ +Y GG + L + E Y + TW + R + V
Sbjct: 213 VLHNCIYAAGGYDGQDQL--NSVERYDVET-------ETWT---FVAPMKHRRSALGITV 260
Query: 118 YGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIP 154
+ +Y+ GGY+G + + Y W+ V
Sbjct: 261 HQGRIYVLGGYDG--HTFLDSVECYDPDTDTWSEVTR 295
Score = 57.3 bits (139), Expect = 2e-10
Identities = 42/189 (22%), Positives = 61/189 (32%), Gaps = 24/189 (12%)
Query: 1 MHWTVHLTGGPRRVNHAAVLNDNKIFTFGGYCSGE-------DYVKRRPMDGEP-PSYRD 52
H H +G R +HA + I+T GGY + + R
Sbjct: 4 HHHHHHSSGLVPRGSHAPKVG-RLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRS 62
Query: 53 FHTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRS 112
++ G +Y GGR + S + C + W + V R
Sbjct: 63 GLAGCVVGGLLYAVGGRNNSPDGNTDSSALDC-----YNPMTNQWS---PCAPMSVPRNR 114
Query: 113 HSAFVYGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPHGAP-PTKRRRQSCIIKG 171
V +Y GG +G H+N + RY R EW V AP T+R +
Sbjct: 115 IGVGVIDGHIYAVGGSHG--CIHHNSVERYEPERDEWHLV----APMLTRRIGVGVAVLN 168
Query: 172 DTLIMFGGS 180
L GG
Sbjct: 169 RLLYAVGGF 177
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway,
protein-binding, UBI degradation, UBL conjugation
pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Length = 301
Score = 60.8 bits (148), Expect = 1e-11
Identities = 34/182 (18%), Positives = 52/182 (28%), Gaps = 36/182 (19%)
Query: 12 RRVNHAAVLNDNKIFTFGGY------CSGE--DYVKRR-----PMDGEPPSYRDFHTANI 58
RR A + I+ GG+ S E D + M + R+ +
Sbjct: 102 RRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDM----QTAREGAGLVV 157
Query: 59 IDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVY 118
G +Y GG + E Y P W + R +
Sbjct: 158 ASGVIYCLGGYD--GLNILNSVEKYDPHT---G----HWT---NVTPMATKRSGAGVALL 205
Query: 119 GDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPHGAP-PTKRRRQSCIIKGDTLIMF 177
D +Y+ GG++G H + + Y R W V T R + L
Sbjct: 206 NDHIYVVGGFDG--TAHLSSVEAYNIRTDSWTTV----TSMTTPRCYVGATVLRGRLYAI 259
Query: 178 GG 179
G
Sbjct: 260 AG 261
Score = 60.8 bits (148), Expect = 1e-11
Identities = 34/175 (19%), Positives = 53/175 (30%), Gaps = 36/175 (20%)
Query: 12 RRVNHAAVLNDNKIFTFGGYCSGEDYVK--------------RRPMDGEPPSYRDFHTAN 57
R V+ I+ GGY G + + PM + R
Sbjct: 149 AREGAGLVVASGVIYCLGGY-DGLNILNSVEKYDPHTGHWTNVTPM----ATKRSGAGVA 203
Query: 58 IIDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFV 117
+++ +Y+ GG + L S E Y +W T S+ R A V
Sbjct: 204 LLNDHIYVVGGFDGTAHL--SSVEAYNIRT-------DSWT---TVTSMTTPRCYVGATV 251
Query: 118 YGDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPHGAPPTKRRRQSCIIKGD 172
LY GY+G + I Y W V + T+R + +
Sbjct: 252 LRGRLYAIAGYDG--NSLLSSIECYDPIIDSWEVV---TSMGTQRCDAGVCVLRE 301
Score = 59.2 bits (144), Expect = 4e-11
Identities = 32/180 (17%), Positives = 58/180 (32%), Gaps = 28/180 (15%)
Query: 11 PRRVNHAAVLNDNKIFTFGGYCSGEDYV----------KRRPMDGEPPSYRDFHTANIID 60
PR A + + + GG+ S + + + R + + +
Sbjct: 5 PR--TRARLGANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLH 62
Query: 61 GRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYGD 120
R+Y+ GG S L S E + W + V R A GD
Sbjct: 63 DRIYVIGGYDGRSRL--SSVECLDYTA----DEDGVWYS---VAPMNVRRGLAGATTLGD 113
Query: 121 GLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPHGAP-PTKRRRQSCIIKGDTLIMFGG 179
+Y+ GG++G + + RY +W+ + T R ++ + GG
Sbjct: 114 MIYVSGGFDG--SRRHTSMERYDPNIDQWSML----GDMQTAREGAGLVVASGVIYCLGG 167
Score = 43.8 bits (104), Expect = 8e-06
Identities = 23/121 (19%), Positives = 38/121 (31%), Gaps = 13/121 (10%)
Query: 60 DGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYG 119
+ + + GG G + S E Y P W S+ RR ++
Sbjct: 14 NEVLLVVGGFGSQQS-PIDVVEKYDPKTQ-------EWS---FLPSITRKRRYVASVSLH 62
Query: 120 DGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPHGAPPTKRRRQSCIIKGDTLIMFGG 179
D +Y+ GGY+G + + E +R GD + + GG
Sbjct: 63 DRIYVIGGYDG--RSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGG 120
Query: 180 S 180
Sbjct: 121 F 121
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 33.1 bits (75), Expect = 0.052
Identities = 23/159 (14%), Positives = 43/159 (27%), Gaps = 52/159 (32%)
Query: 37 YVKRRPMDGEPPSY--------RDFHTANIIDGRMYIWGGRGDESSLYHSGSEVYCPDLV 88
YV + + +F Y+ G++ H+ + +
Sbjct: 67 YVSSLVEPSKVGQFDQVLNLCLTEFENC-------YL---EGND---IHALAAKLLQEND 113
Query: 89 YLDLKYFTWIRP----NTTGSVPVGRRSHSAFVYG--DG---LY-IFGG----------- 127
+K I+ P ++S+SA +G L IFGG
Sbjct: 114 TTLVKTKELIKNYITARIMAKRPFDKKSNSALFRAVGEGNAQLVAIFGGQGNTDDYFEEL 173
Query: 128 ------YNGLVEE----HYNDIYRYCTRRQEWARVIPHG 156
Y+ LV + + + +V G
Sbjct: 174 RDLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQG 212
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence
form, precursor of copper enzyme., oxidoreductase; 1.40A
{Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB:
1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A
2eib_A 1t2x_A 2eid_A 2wq8_A
Length = 656
Score = 32.2 bits (72), Expect = 0.095
Identities = 21/115 (18%), Positives = 38/115 (33%), Gaps = 21/115 (18%)
Query: 12 RRVNHAAV-LNDNKIFTFGGYCSGEDYVKRRPMD---------------GEPPSYRDFHT 55
R H +V L D F GG G + P+ R +H+
Sbjct: 455 ARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHS 514
Query: 56 ANII--DGRMYIWGG-RGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVP 107
+++ DGR++ GG + + H ++++ P+ YL
Sbjct: 515 ISLLLPDGRVFNGGGGLCGDCTTNHFDAQIFTPN--YLYNSNGNLATRPKITRTS 567
Score = 28.4 bits (62), Expect = 1.5
Identities = 29/193 (15%), Positives = 54/193 (27%), Gaps = 26/193 (13%)
Query: 11 PRRVNHAAVLNDNKIFTFGGYCSGEDYVK--------------RRPMDGEPPSYRDFHTA 56
R +A ++D ++FT GG SG + K P D
Sbjct: 286 ARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGL 345
Query: 57 NIIDGRMYIWGG-RGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSA 115
D +++G +G S + + D+K + N + +
Sbjct: 346 YRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVM 405
Query: 116 FVYGDG-LYIFGG------YNGLVEEHYNDIYRYCTRRQEWARVIPHGAPPTKRRRQSCI 168
+ G + FGG + H + T R + +
Sbjct: 406 YDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFAS---NGLYFARTFHTSV 462
Query: 169 IKGD-TLIMFGGS 180
+ D + + GG
Sbjct: 463 VLPDGSTFITGGQ 475
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna;
HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 29.1 bits (64), Expect = 0.45
Identities = 4/15 (26%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
Query: 72 ESSLYHSGSEVYCPD 86
++SL ++Y D
Sbjct: 26 QASL-----KLYADD 35
>2xpf_A 4-amino-4-deoxychorismate lyase; para-aminobenzoic acid, folate
biosynthesis; HET: PLP PG4; 1.75A {Pseudomonas
aeruginosa} PDB: 2y4r_A* 2xpf_B*
Length = 292
Score = 27.9 bits (63), Expect = 1.6
Identities = 10/47 (21%), Positives = 15/47 (31%), Gaps = 3/47 (6%)
Query: 77 HSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYGDGLY 123
H + +Y W+ + V R YGDGL+
Sbjct: 5 HHHHHHSSGENLYFQGHMLDWVDGRPAAELSVRDR---GLAYGDGLF 48
>1ldj_A Cullin homolog 1, CUL-1; cullin, ROC1, HRT1, zinc ring finger,
ligase, ubiquitin, ubiquitination, SCF; 3.00A {Homo
sapiens} SCOP: a.4.5.34 a.118.17.1 e.40.1.1 PDB: 1u6g_A
1ldk_A 1ldk_B 3rtr_A
Length = 760
Score = 27.5 bits (60), Expect = 2.9
Identities = 10/42 (23%), Positives = 17/42 (40%)
Query: 133 EEHYNDIYRYCTRRQEWARVIPHGAPPTKRRRQSCIIKGDTL 174
E Y +Y YCT + + G PP+K ++ +
Sbjct: 27 MELYTHVYNYCTSVHQSNQARGAGVPPSKSKKGQTPGGAQFV 68
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 26.7 bits (58), Expect = 5.4
Identities = 16/83 (19%), Positives = 33/83 (39%), Gaps = 16/83 (19%)
Query: 21 NDNKIFTFGGY-CSGEDYVKRRPMDGEPPSYRDFHTANIIDGRMYIWGGRGDESSLYHSG 79
D ++ G+ ++ +R M + DF ++ ++ R D ++ SG
Sbjct: 469 LDQYFYSHIGHHLKNIEHPER--MTLFRMVFLDF---RFLEQKI-----RHDSTAWNASG 518
Query: 80 SEVYCPDLVYLDLK-YFTWIRPN 101
S + + + LK Y +I N
Sbjct: 519 SIL---NTL-QQLKFYKPYICDN 537
>2o7g_A Probable RNA polymerase sigma-C factor; sigma factor, transcription
regulation, -10 element recognit domain, transcription;
2.70A {Mycobacterium tuberculosis}
Length = 112
Score = 25.5 bits (56), Expect = 7.0
Identities = 2/15 (13%), Positives = 7/15 (46%)
Query: 131 LVEEHYNDIYRYCTR 145
++ D++R+
Sbjct: 29 FIKATQQDVWRFVAY 43
>3of7_A Regulator of chromosome condensation; beta-propeller, guanine
nucleotide exchange factor (GEF), GS histones, nucleus,
cell cycle; 1.90A {Saccharomyces cerevisiae}
Length = 473
Score = 25.9 bits (57), Expect = 8.9
Identities = 23/137 (16%), Positives = 39/137 (28%), Gaps = 37/137 (27%)
Query: 15 NH-AAVLNDNKIFTFG-------GYCSGEDYVKRRPMDGEPPSYR-------DFHTANI- 58
+H + + +F +G G E + + + H +
Sbjct: 214 DHILFLDEEGMVFAWGNGQQNQLGRKVMERFRLKTLDPRPFGLRHVKYIASGENHCFALT 273
Query: 59 IDGRMYIWG-------GRGDESSLYHSGSEVYCPDLV-YLDLKYFTWIRPNTTGSVPVGR 110
D ++ WG G ++ G+ V P + D I G
Sbjct: 274 KDNKLVSWGLNQFGQCGVSEDVE---DGALVTKPKRLALPDNVVIRSI---AAGE----- 322
Query: 111 RSHSAFVYGDG-LYIFG 126
HS + DG LY G
Sbjct: 323 -HHSLILSQDGDLYSCG 338
>3ott_A Two-component system sensor histidine kinase; beta-propeller,
beta-sandwich, transcription; HET: TBR; 2.30A
{Bacteroides thetaiotaomicron}
Length = 758
Score = 26.2 bits (58), Expect = 9.0
Identities = 4/21 (19%), Positives = 7/21 (33%)
Query: 112 SHSAFVYGDGLYIFGGYNGLV 132
+ F + GG +G
Sbjct: 600 TSLLFDPKEDCVYLGGADGFG 620
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.323 0.143 0.478
Gapped
Lambda K H
0.267 0.0698 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 3,118,656
Number of extensions: 183913
Number of successful extensions: 709
Number of sequences better than 10.0: 1
Number of HSP's gapped: 592
Number of HSP's successfully gapped: 57
Length of query: 180
Length of database: 6,701,793
Length adjustment: 88
Effective length of query: 92
Effective length of database: 4,244,745
Effective search space: 390516540
Effective search space used: 390516540
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 54 (24.6 bits)