RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy8877
(180 letters)
>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1,
KEAP1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 288
Score = 37.2 bits (84), Expect = 5e-04
Identities = 23/151 (15%), Positives = 45/151 (29%), Gaps = 5/151 (3%)
Query: 2 HWTVHLTGGPRRVNHAAVLNDNKIFTFGGYCSGEDYVKRRPMDGEPPSYRDFHTANIIDG 61
W + RR+ + + ++ GG+ E +R N I
Sbjct: 128 EWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRS 187
Query: 62 RMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYGDG 121
G + +Y +G L ++ + R + V+
Sbjct: 188 GA---GVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVHQGR 244
Query: 122 LYIFGGYNGLVEEHYNDIYRYCTRRQEWARV 152
+Y+ GGY+G + + Y W+ V
Sbjct: 245 IYVLGGYDG--HTFLDSVECYDPDTDTWSEV 273
Score = 30.3 bits (66), Expect = 0.13
Identities = 21/119 (17%), Positives = 35/119 (29%), Gaps = 13/119 (10%)
Query: 59 IDGRMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVY 118
+ +Y GG +S S + + TW+R + V R + V
Sbjct: 3 VGRLIYTAGGYFRQSL-----SYLEA-----YNPSNGTWLR---LADLQVPRSGLAGCVV 49
Query: 119 GDGLYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPHGAPPTKRRRQSCIIKGDTLIMF 177
G LY GG N + + + C + R +I G +
Sbjct: 50 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVG 108
Score = 29.5 bits (64), Expect = 0.22
Identities = 20/168 (11%), Positives = 39/168 (23%), Gaps = 1/168 (0%)
Query: 3 WTVHLTGGPRRVNHAAVLNDNKIFTFGGYCSG-EDYVKRRPMDGEPPSYRDFHTANIIDG 61
W R A + ++ GG + + +D P + +
Sbjct: 31 WLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSV 90
Query: 62 RMYIWGGRGDESSLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYGDG 121
G + +Y G C ++ + + R V
Sbjct: 91 PRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRL 150
Query: 122 LYIFGGYNGLVEEHYNDIYRYCTRRQEWARVIPHGAPPTKRRRQSCII 169
LY GG++G + + Y + I
Sbjct: 151 LYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVLHNCI 198
Score = 24.5 bits (51), Expect = 8.5
Identities = 8/35 (22%), Positives = 12/35 (34%)
Query: 1 MHWTVHLTGGPRRVNHAAVLNDNKIFTFGGYCSGE 35
WT RR ++ +I+ GGY
Sbjct: 221 ETWTFVAPMKHRRSALGITVHQGRIYVLGGYDGHT 255
>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain
{Fungi (Fusarium sp.) [TaxId: 29916]}
Length = 387
Score = 28.6 bits (62), Expect = 0.46
Identities = 18/103 (17%), Positives = 37/103 (35%), Gaps = 18/103 (17%)
Query: 1 MHWTVHLTGGPRRVNHAAVLNDNKIFTFGGYCSGEDYVKRRPMD---------------G 45
+ + R + + VL D F GG G + P+
Sbjct: 278 TVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQN 337
Query: 46 EPPSYRDFHTANII--DGRMYIWGGR-GDESSLYHSGSEVYCP 85
R +H+ +++ DGR++ GG + + H ++++ P
Sbjct: 338 PNSIVRVYHSISLLLPDGRVFNGGGGLCGDCTTNHFDAQIFTP 380
Score = 27.9 bits (60), Expect = 0.73
Identities = 17/118 (14%), Positives = 36/118 (30%), Gaps = 8/118 (6%)
Query: 15 NHAAVLNDNKIFTFGGYCSGEDYVKRRPMDGEPPSYRDFHTANIIDGRMYIWGGRGDESS 74
++ G +G + + + DG +I GG
Sbjct: 254 DYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGG-QRRGI 312
Query: 75 LYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHS-AFVYGDG-LYIFGGYNG 130
+ + V+ P++ + T+ + R HS + + DG ++ GG
Sbjct: 313 PFEDSTPVFTPEI--YVPEQDTF---YKQNPNSIVRVYHSISLLLPDGRVFNGGGGLC 365
Score = 25.5 bits (54), Expect = 4.1
Identities = 3/29 (10%), Positives = 7/29 (24%)
Query: 3 WTVHLTGGPRRVNHAAVLNDNKIFTFGGY 31
W + A ++ + Y
Sbjct: 11 WGPTIDLPIVPAAAAIEPTSGRVLMWSSY 39
>d1ldja2 a.118.17.1 (A:17-410) Cullin homolog 1, Cul-1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 394
Score = 26.3 bits (57), Expect = 2.6
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 133 EEHYNDIYRYCTRRQEWARVIPHGAPPTKRRRQSC 167
E Y +Y YCT + + G PP+K ++
Sbjct: 27 MELYTHVYNYCTSVHQSNQARGAGVPPSKSKKGQT 61
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase
{Streptomyces clavuligerus [TaxId: 1901]}
Length = 311
Score = 25.7 bits (55), Expect = 3.4
Identities = 6/30 (20%), Positives = 14/30 (46%)
Query: 34 GEDYVKRRPMDGEPPSYRDFHTANIIDGRM 63
+ +DGE +++D+ N ++ R
Sbjct: 278 ARECGFDVSLDGETATFQDWIGGNYVNIRR 307
>d1h3la_ a.177.1.1 (A:) Sigma factor SigR {Streptomyces coelicolor
a3(2) [TaxId: 100226]}
Length = 75
Score = 23.3 bits (50), Expect = 7.2
Identities = 3/16 (18%), Positives = 5/16 (31%)
Query: 131 LVEEHYNDIYRYCTRR 146
E + +Y R
Sbjct: 12 DALEFLDQMYSAALRM 27
>d1jtdb_ b.69.5.2 (B:) beta-lactamase inhibitor protein-II, BLIP-II
{Streptomyces exfoliatus [TaxId: 1905]}
Length = 273
Score = 24.7 bits (52), Expect = 7.5
Identities = 15/166 (9%), Positives = 37/166 (22%), Gaps = 1/166 (0%)
Query: 15 NHAAVLNDNKIFTFGGYCSGEDYVKRRPMDGEPPSY-RDFHTANIIDGRMYIWGGRGDES 73
H L K+ +G +G+ + G ++H+ + DG + WGG D
Sbjct: 36 FHGLALKGGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYHSLALKDGEVIAWGGNEDGQ 95
Query: 74 SLYHSGSEVYCPDLVYLDLKYFTWIRPNTTGSVPVGRRSHSAFVYGDGLYIFGGYNGLVE 133
+ + + + + +
Sbjct: 96 TTVPAEARSGVDAIAAGAWASYALKDGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTA 155
Query: 134 EHYNDIYRYCTRRQEWARVIPHGAPPTKRRRQSCIIKGDTLIMFGG 179
+ + + + + I + G
Sbjct: 156 LAVKNGGVIAWGDNYFGQTTVPAEAQSGVDDVAGGIFHSLALKDGK 201
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.323 0.143 0.478
Gapped
Lambda K H
0.267 0.0522 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 792,799
Number of extensions: 38263
Number of successful extensions: 136
Number of sequences better than 10.0: 1
Number of HSP's gapped: 129
Number of HSP's successfully gapped: 23
Length of query: 180
Length of database: 2,407,596
Length adjustment: 80
Effective length of query: 100
Effective length of database: 1,309,196
Effective search space: 130919600
Effective search space used: 130919600
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 50 (23.5 bits)