Your job contains 1 sequence.
>psy8879
MSLIAYLMRDILRDGMSQYCLVLLLTIYSYVTATSSPSTPTSTLPSSPSTPTPWSCPSIK
NDLCACDLPHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTL
HGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQL
YKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLR
SVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQ
IDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPL
KSLQELRLDDNDISMEPECIYVGFNTMDLELIYSGVWRHSTLLIPVMLSLCTRSSVVTRY
RYCVVLIEGSNILDQSALVLGCSEILALVPTLTSQPLSYVTSLRANVTGLGTVQVYVQLW
TNYDPNCLLTITLYIDGDVIVQKNTNCSRPWVSLKQLPWSPKYQVCATLGEFPTDKPLLH
CITITNPFPSPPALPLAGPSTPTHSSHYTSLINLSNVLSLCLVLLCVLIVILICVLVRKI
CRTPRNSTIHHHACFIPVAQQEDDINRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSV
RRGALAGLDKLTSLSCHHNQIDVLEDHSFSNVIG
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy8879
(694 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0034540 - symbol:Lrt "Leucine-rich tendon-specific... 720 7.6e-74 2
UNIPROTKB|P35858 - symbol:IGFALS "Insulin-like growth fac... 326 3.0e-27 2
WB|WBGene00002282 - symbol:let-4 species:6239 "Caenorhabd... 298 2.5e-25 2
UNIPROTKB|F1LRE2 - symbol:Igfals "Insulin-like growth fac... 299 4.8e-25 2
RGD|68429 - symbol:Igfals "insulin-like growth factor bin... 298 6.4e-25 2
MGI|MGI:107973 - symbol:Igfals "insulin-like growth facto... 299 2.1e-24 2
UNIPROTKB|Q8TF66 - symbol:LRRC15 "Leucine-rich repeat-con... 268 1.5e-23 2
FB|FBgn0033250 - symbol:CG14762 species:7227 "Drosophila ... 293 3.1e-23 1
UNIPROTKB|Q1KS52 - symbol:ALS "Acid-labile subunit" speci... 289 3.9e-23 2
UNIPROTKB|F1NI07 - symbol:IGFALS "Uncharacterized protein... 294 6.9e-23 1
UNIPROTKB|F1MJZ4 - symbol:IGFALS "Uncharacterized protein... 281 8.6e-23 2
FB|FBgn0261269 - symbol:conv "convoluted" species:7227 "D... 268 2.1e-22 2
UNIPROTKB|Q7Z2Q7 - symbol:LRRC70 "Leucine-rich repeat-con... 289 2.4e-22 2
MGI|MGI:107935 - symbol:Lrig1 "leucine-rich repeats and i... 287 1.4e-21 1
RGD|70551 - symbol:Lrrc15 "leucine rich repeat containing... 264 2.5e-21 2
MGI|MGI:1921738 - symbol:Lrrc15 "leucine rich repeat cont... 257 3.4e-21 2
FB|FBgn0259677 - symbol:CG42346 species:7227 "Drosophila ... 260 6.1e-21 2
UNIPROTKB|F1SRC2 - symbol:CHADL "Uncharacterized protein"... 259 3.7e-20 2
UNIPROTKB|P22792 - symbol:CPN2 "Carboxypeptidase N subuni... 260 7.4e-20 2
FB|FBgn0029114 - symbol:Tollo "Tollo" species:7227 "Droso... 253 1.2e-19 2
MGI|MGI:2443718 - symbol:Lrig2 "leucine-rich repeats and ... 268 1.5e-19 1
FB|FBgn0261509 - symbol:haf "hattifattener" species:7227 ... 281 1.5e-19 2
MGI|MGI:1919006 - symbol:Cpn2 "carboxypeptidase N, polype... 256 3.4e-19 2
FB|FBgn0036494 - symbol:Toll-6 "Toll-6" species:7227 "Dro... 262 3.6e-19 2
UNIPROTKB|P0C6S8 - symbol:LINGO3 "Leucine-rich repeat and... 260 3.9e-19 1
MGI|MGI:2685352 - symbol:Podnl1 "podocan-like 1" species:... 256 4.2e-19 2
UNIPROTKB|A0ENH4 - symbol:TLR3 "Toll-like receptor 3" spe... 244 5.9e-19 2
FB|FBgn0004364 - symbol:18w "18 wheeler" species:7227 "Dr... 254 6.6e-19 2
UNIPROTKB|Q6NUI6 - symbol:CHADL "Chondroadherin-like prot... 243 6.9e-19 2
RGD|2724 - symbol:Gp5 "glycoprotein V (platelet)" species... 256 9.7e-19 1
UNIPROTKB|F1S5B4 - symbol:LGR6 "Uncharacterized protein" ... 246 1.1e-18 2
FB|FBgn0034083 - symbol:lbk "lambik" species:7227 "Drosop... 262 1.2e-18 2
MGI|MGI:3609246 - symbol:Lingo3 "leucine rich repeat and ... 255 1.4e-18 1
UNIPROTKB|O75094 - symbol:SLIT3 "Slit homolog 3 protein" ... 173 1.4e-18 3
UNIPROTKB|J3KNP3 - symbol:SLIT3 "Slit homolog 3 protein" ... 173 1.4e-18 3
UNIPROTKB|Q6PEZ8 - symbol:PODNL1 "Podocan-like protein 1"... 252 2.0e-18 1
ZFIN|ZDB-GENE-050506-80 - symbol:lrrtm1 "leucine rich rep... 252 2.2e-18 1
FB|FBgn0028888 - symbol:CG4168 species:7227 "Drosophila m... 259 2.3e-18 2
FB|FBgn0023095 - symbol:caps "capricious" species:7227 "D... 255 3.7e-18 2
UNIPROTKB|E2RGS8 - symbol:LGR6 "Uncharacterized protein" ... 241 5.0e-18 2
UNIPROTKB|Q65Z91 - symbol:TSKU "Tsukushin" species:9031 "... 242 5.8e-18 1
FB|FBgn0003255 - symbol:rk "rickets" species:7227 "Drosop... 245 6.0e-18 2
UNIPROTKB|F1NDH7 - symbol:TSKU "Tsukushin" species:9031 "... 242 6.1e-18 1
UNIPROTKB|C9JEE2 - symbol:LRRTM1 "Leucine-rich repeat tra... 183 7.3e-18 2
RGD|1307755 - symbol:Nepn "nephrocan" species:10116 "Ratt... 226 7.7e-18 1
UNIPROTKB|F1SF23 - symbol:LOC100520342 "Uncharacterized p... 248 8.4e-18 2
RGD|1307733 - symbol:Lgr5 "leucine rich repeat containing... 238 8.9e-18 2
UNIPROTKB|Q5TJ59 - symbol:TLR3 "Toll-like receptor 3" spe... 233 9.5e-18 2
MGI|MGI:1341817 - symbol:Lgr5 "leucine rich repeat contai... 238 1.1e-17 2
ZFIN|ZDB-GENE-031113-8 - symbol:lrrc15 "leucine rich repe... 246 1.2e-17 1
FB|FBgn0010452 - symbol:trn "tartan" species:7227 "Drosop... 247 1.7e-17 2
ZFIN|ZDB-GENE-091214-3 - symbol:lingo4b "leucine rich rep... 245 1.9e-17 1
WB|WBGene00022129 - symbol:lron-11 species:6239 "Caenorha... 244 1.9e-17 1
RGD|1562655 - symbol:Tlr13 "toll-like receptor 13" specie... 216 1.9e-17 2
MGI|MGI:1914394 - symbol:Lrrc40 "leucine rich repeat cont... 241 2.2e-17 2
ZFIN|ZDB-GENE-010306-3 - symbol:slit2 "slit (Drosophila) ... 182 2.3e-17 3
UNIPROTKB|Q7L985 - symbol:LINGO2 "Leucine-rich repeat and... 243 3.1e-17 1
FB|FBgn0243486 - symbol:rdo "reduced ocelli" species:7227... 253 3.2e-17 2
UNIPROTKB|O94898 - symbol:LRIG2 "Leucine-rich repeats and... 242 3.5e-17 2
UNIPROTKB|Q86VH5 - symbol:LRRTM3 "Leucine-rich repeat tra... 242 3.6e-17 1
MGI|MGI:2389177 - symbol:Lrrtm3 "leucine rich repeat tran... 242 3.6e-17 1
RGD|1304866 - symbol:Lrrtm3 "leucine rich repeat transmem... 242 3.6e-17 1
ZFIN|ZDB-GENE-041111-75 - symbol:lrig2 "leucine-rich repe... 246 3.8e-17 1
FB|FBgn0034476 - symbol:Toll-7 "Toll-7" species:7227 "Dro... 227 4.6e-17 2
ZFIN|ZDB-GENE-080327-14 - symbol:lrrtm4l2 "leucine rich r... 238 4.8e-17 1
MGI|MGI:3045213 - symbol:Tlr13 "toll-like receptor 13" sp... 216 5.1e-17 2
TAIR|locus:2016319 - symbol:TMM "TOO MANY MOUTHS" species... 239 5.2e-17 1
UNIPROTKB|A5H649 - symbol:TLR3 "Toll-like receptor 3" spe... 226 5.5e-17 2
UNIPROTKB|F1MLX5 - symbol:LGR4 "Uncharacterized protein" ... 234 5.8e-17 2
UNIPROTKB|F1MT22 - symbol:LGR5 "Uncharacterized protein" ... 237 6.1e-17 2
MGI|MGI:2389180 - symbol:Lrrtm4 "leucine rich repeat tran... 240 6.3e-17 1
RGD|1560707 - symbol:Lrrtm4 "leucine rich repeat transmem... 240 6.3e-17 1
UNIPROTKB|Q96JA1 - symbol:LRIG1 "Leucine-rich repeats and... 244 6.7e-17 1
MGI|MGI:2441805 - symbol:Lgr6 "leucine-rich repeat-contai... 233 7.9e-17 2
UNIPROTKB|F1NHG5 - symbol:SLIT2 "Uncharacterized protein"... 181 8.2e-17 3
FB|FBgn0038504 - symbol:Sur-8 "Sur-8" species:7227 "Droso... 232 8.6e-17 2
MGI|MGI:2442298 - symbol:Lingo2 "leucine rich repeat and ... 239 8.6e-17 1
MGI|MGI:2443955 - symbol:Lrig3 "leucine-rich repeats and ... 230 1.0e-16 2
RGD|1560339 - symbol:Lgr6 "leucine-rich repeat-containing... 234 1.2e-16 2
UNIPROTKB|E1BG29 - symbol:GP5 "Uncharacterized protein" s... 237 1.3e-16 1
WB|WBGene00022789 - symbol:lron-2 species:6239 "Caenorhab... 224 1.3e-16 2
UNIPROTKB|A6QPQ1 - symbol:NEPN "Uncharacterized protein" ... 236 1.6e-16 2
UNIPROTKB|Q9HBX8 - symbol:LGR6 "Leucine-rich repeat-conta... 232 1.6e-16 2
WB|WBGene00006366 - symbol:sym-1 species:6239 "Caenorhabd... 237 2.0e-16 2
UNIPROTKB|E2QW21 - symbol:LRRTM1 "Uncharacterized protein... 233 2.8e-16 1
MGI|MGI:1194924 - symbol:Cd180 "CD180 antigen" species:10... 235 2.8e-16 1
UNIPROTKB|Q86VH4 - symbol:LRRTM4 "Leucine-rich repeat tra... 234 2.9e-16 1
TAIR|locus:2047530 - symbol:AT2G24230 species:3702 "Arabi... 233 2.9e-16 2
FB|FBgn0260793 - symbol:2mit species:7227 "Drosophila mel... 249 3.4e-16 2
UNIPROTKB|A1A4H9 - symbol:LRRTM1 "Leucine-rich repeat tra... 232 3.6e-16 1
UNIPROTKB|I3L5J3 - symbol:LRRTM1 "Uncharacterized protein... 232 3.6e-16 1
MGI|MGI:2389173 - symbol:Lrrtm1 "leucine rich repeat tran... 232 3.6e-16 1
DICTYBASE|DDB_G0278509 - symbol:DDB_G0278509 "MLK family ... 250 4.3e-16 2
UNIPROTKB|Q86UE6 - symbol:LRRTM1 "Leucine-rich repeat tra... 231 4.6e-16 1
FB|FBgn0000313 - symbol:chp "chaoptic" species:7227 "Dros... 208 4.9e-16 2
ZFIN|ZDB-GENE-080327-5 - symbol:sc:d0316 "sc:d0316" speci... 232 5.5e-16 1
UNIPROTKB|Q6UXM1 - symbol:LRIG3 "Leucine-rich repeats and... 224 5.7e-16 2
RGD|1585921 - symbol:LRRTM1 "leucine rich repeat transmem... 230 6.0e-16 1
UNIPROTKB|F1NG27 - symbol:TLR3 "Uncharacterized protein" ... 234 6.1e-16 1
UNIPROTKB|F1P9F0 - symbol:LGR4 "Uncharacterized protein" ... 218 6.8e-16 2
WARNING: Descriptions of 1042 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0034540 [details] [associations]
symbol:Lrt "Leucine-rich tendon-specific protein"
species:7227 "Drosophila melanogaster" [GO:0016021 "integral to
membrane" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:2001282 "negative regulation of muscle cell chemotaxis toward
tendon cell" evidence=IMP] [GO:0005927 "muscle tendon junction"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0043234 "protein complex" evidence=IPI] [GO:2001283 "Roundabout
signaling pathway involved in muscle cell chemotaxis toward tendon
cell" evidence=IGI] InterPro:IPR001611 PROSITE:PS51450
EMBL:AE013599 GO:GO:0016021 GO:GO:0005886 GO:GO:0043234
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005927 GeneTree:ENSGT00690000101816 RefSeq:NP_611506.2
UniGene:Dm.22099 ProteinModelPortal:A1ZBX8 SMR:A1ZBX8
EnsemblMetazoa:FBtr0302284 GeneID:37342 KEGG:dme:Dmel_CG11136
UCSC:CG11136-RA CTD:37342 FlyBase:FBgn0034540 eggNOG:NOG299525
InParanoid:A1ZBX8 OMA:PIHCESK OrthoDB:EOG48KPT1 GenomeRNAi:37342
NextBio:803193 Bgee:A1ZBX8 GO:GO:2001282 GO:GO:2001283
Uniprot:A1ZBX8
Length = 808
Score = 720 (258.5 bits), Expect = 7.6e-74, Sum P(2) = 7.6e-74
Identities = 158/315 (50%), Positives = 207/315 (65%)
Query: 64 CACDLPHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLP-GKFLEGVTLHG 122
C CDLPHTLRC + + +++ LR P +SLLDC+L NVT L K + V+LHG
Sbjct: 123 CGCDLPHTLRCNIDLHGMMLLADRLR-TSPYS-ISLLDCSLRNVTFLSDAKIFDNVSLHG 180
Query: 123 LVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYK 182
LVISSGE+K + AF+G+ PLQALGLP N L VP +AL+ L+ L+RLDL++N++
Sbjct: 181 LVISSGEIKRVHKSAFLGIRGPLQALGLPGNALMSVPWNALSTLSA-LERLDLANNKIKA 239
Query: 183 LENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLT--VSVVAALQGLR 240
L F GL+SL +L+LS N++ ++SQ L L VL+L GNRL + +L
Sbjct: 240 LGTADFVGLTSLVYLELSNNQISSISQRTFVNLRKLEVLKLGGNRLGDYAQSLRSLSQCL 299
Query: 241 SVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQ 300
S+ LDL N L GPL T+P + +L+ L++ N S++ ALA +L SLS HNQ
Sbjct: 300 SLRQLDLQANNLNGPLSEQTLPGMRNLESLNLNRNLIKSIQNKALANFSRLVSLSLRHNQ 359
Query: 301 IDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPL 360
IDVL+DH+F L L LDL++N IVA+S ASL HLS LT LDL+HNFLRALT DLI PL
Sbjct: 360 IDVLQDHAFFGLGALDSLDLSYNGIVAISSASLQHLSRLTVLDLTHNFLRALTSDLIAPL 419
Query: 361 KSLQELRLDDNDISM 375
SL+ELRL NDIS+
Sbjct: 420 PSLRELRLAGNDISI 434
Score = 216 (81.1 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 108/393 (27%), Positives = 180/393 (45%)
Query: 72 LRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVT-VLPGKFLEGV-TLHGLVISSGE 129
L+ N+ YA +SLR L + LD +N+ L + L G+ L L ++
Sbjct: 278 LKLGGNRLGDYA--QSLRSLSQCLSLRQLDLQANNLNGPLSEQTLPGMRNLESLNLNRNL 335
Query: 130 LKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFK 189
+K+I + A S L +L L +N + V+ A L LD LDLS+N + + + S +
Sbjct: 336 IKSIQNKALANFSR-LVSLSLRHNQIDVLQDHAFFGLGA-LDSLDLSYNGIVAISSASLQ 393
Query: 190 GLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSH 249
LS L LDL++N L L+ D +APL +LR LRL GN +++ A+ G R + L +
Sbjct: 394 HLSRLTVLDLTHNFLRALTSDLIAPLPSLRELRLAGNDISIVARNAMDGARELESLQMQE 453
Query: 250 NLLAGPLGPSTVPRLSSLKVLSIAHNQFSS--VRRGALAGLDKLT----SLSCHHNQIDV 303
N L+ S P L+ + H+ S+ V L G L +LSC + ++
Sbjct: 454 NPLSCDC--SIRPFAEWLQESQL-HSSLSASCVTPPRLEGAPLLQVPVETLSCDMDNVEK 510
Query: 304 LEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTT-LDLSHNFLRALTQ-----DLI 357
+ + L TL+ + + I +S + H + +T L +L L++ D I
Sbjct: 511 DNANIMQHLETLAKPNQT-SPIKDLSEEIILHELHFSTDYGLILTWLLNLSKKDYMCDAI 569
Query: 358 TPLKS--LQELRLDDNDISMEPECIYVGFNTMDLELIYSGVWRHSTLLIPVMLSLCTRSS 415
K + E+ +D++ I E + + G NT+ ++++P SL
Sbjct: 570 FVYKEEHINEILIDNSPIHCESKVVN-GQNTV-------------SVIVPDSSSL----E 611
Query: 416 VVTRYRYCVVLIEGSNILDQSALVLGCSEILAL 448
+ YR+C+V+I+ S L +GCS I L
Sbjct: 612 IGESYRFCLVMIQEQK--PDSELNIGCSNITRL 642
Score = 169 (64.5 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 84/319 (26%), Positives = 135/319 (42%)
Query: 145 LQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKL 204
L+ L L N L+ + P NL+ L+L+ N + ++N + S L L L +N++
Sbjct: 301 LRQLDLQANNLNGPLSEQTLPGMRNLESLNLNRNLIKSIQNKALANFSRLVSLSLRHNQI 360
Query: 205 MTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRL 264
L L L L L N + A+LQ L +T LDL+HN L L + L
Sbjct: 361 DVLQDHAFFGLGALDSLDLSYNGIVAISSASLQHLSRLTVLDLTHNFLRA-LTSDLIAPL 419
Query: 265 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 324
SL+ L +A N S V R A+ G +L SL N + D S R + H+
Sbjct: 420 PSLRELRLAGNDISIVARNAMDGARELESLQMQENPLSC--DCSIRPFAEWLQESQLHSS 477
Query: 325 IVA-------VSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDD--NDISM 375
+ A + GA L + + TL + + +++ L++L + D+S
Sbjct: 478 LSASCVTPPRLEGAPLLQVP-VETLSCDMDNVEKDNANIMQHLETLAKPNQTSPIKDLSE 536
Query: 376 EPECIYVGFNTMDLELIYSGVWRHSTLLIPVMLSLCTRSSVVTRYRYCVVLIEGSNILDQ 435
E + F+T D LI + W L + +C V +LI+ S I +
Sbjct: 537 EIILHELHFST-DYGLILT--W---LLNLSKKDYMCDAIFVYKEEHINEILIDNSPIHCE 590
Query: 436 SALVLGCSEILALVPTLTS 454
S +V G + + +VP +S
Sbjct: 591 SKVVNGQNTVSVIVPDSSS 609
Score = 110 (43.8 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 26/67 (38%), Positives = 39/67 (58%)
Query: 624 DINRNNSDSRYVKLQATTIL-LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID 682
D+ NN + L T+ + +L+ L++ N S++ ALA +L SLS HNQID
Sbjct: 305 DLQANNLNG---PLSEQTLPGMRNLESLNLNRNLIKSIQNKALANFSRLVSLSLRHNQID 361
Query: 683 VLEDHSF 689
VL+DH+F
Sbjct: 362 VLQDHAF 368
Score = 86 (35.3 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 30/82 (36%), Positives = 45/82 (54%)
Query: 315 LSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRAL-TQDLITPLKSLQELRLDDNDI 373
L L L N +++V +L+ LS L LDL++N ++AL T D + L SL L L +N I
Sbjct: 203 LQALGLPGNALMSVPWNALSTLSALERLDLANNKIKALGTADFVG-LTSLVYLELSNNQI 261
Query: 374 SMEPECIYVGFNTMDLELIYSG 395
S + +V N LE++ G
Sbjct: 262 SSISQRTFV--NLRKLEVLKLG 281
Score = 44 (20.5 bits), Expect = 7.6e-74, Sum P(2) = 7.6e-74
Identities = 9/12 (75%), Positives = 11/12 (91%)
Query: 632 SRYVKLQATTIL 643
+RY+KLQATT L
Sbjct: 797 TRYLKLQATTSL 808
>UNIPROTKB|P35858 [details] [associations]
symbol:IGFALS "Insulin-like growth factor-binding protein
complex acid labile subunit" species:9606 "Homo sapiens"
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005576 "extracellular
region" evidence=NAS;TAS] [GO:0005520 "insulin-like growth factor
binding" evidence=TAS] [GO:0007165 "signal transduction"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005634 Reactome:REACT_116125 GO:GO:0007165
GO:GO:0005615 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 EMBL:M86826 EMBL:AF192554
EMBL:AK303146 EMBL:AC012180 EMBL:AL031724 IPI:IPI00020996
IPI:IPI00925635 PIR:A41915 RefSeq:NP_001139478.1 RefSeq:NP_004961.1
UniGene:Hs.839 ProteinModelPortal:P35858 SMR:P35858 STRING:P35858
DMDM:543800 PaxDb:P35858 PeptideAtlas:P35858 PRIDE:P35858
DNASU:3483 Ensembl:ENST00000215539 Ensembl:ENST00000415638
GeneID:3483 KEGG:hsa:3483 UCSC:uc002cmy.3 CTD:3483
GeneCards:GC16M001840 HGNC:HGNC:5468 HPA:HPA040692 HPA:HPA040948
MIM:601489 neXtProt:NX_P35858 Orphanet:140941 PharmGKB:PA29702
HOGENOM:HOG000033909 HOVERGEN:HBG000327 InParanoid:P35858
OMA:HLDRGCL OrthoDB:EOG4FFD1R PhylomeDB:P35858 GenomeRNAi:3483
NextBio:13696 ArrayExpress:P35858 Bgee:P35858 CleanEx:HS_IGFALS
Genevestigator:P35858 GermOnline:ENSG00000099769 GO:GO:0005520
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 Uniprot:P35858
Length = 605
Score = 326 (119.8 bits), Expect = 3.0e-27, Sum P(2) = 3.0e-27
Identities = 92/258 (35%), Positives = 128/258 (49%)
Query: 112 GKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLD 171
G F L L +S+ L + DG F GL S L L L N L+V+P +A L +L
Sbjct: 140 GTFAHTPALASLGLSNNRLSRLEDGLFEGLGS-LWDLNLGWNSLAVLPDAAFRGLG-SLR 197
Query: 172 RLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVS 231
L L+ N+L L+ F GL+ L LDLS N L + + L L+ L L N +
Sbjct: 198 ELVLAGNRLAYLQPALFSGLAELRELDLSRNALRAIKANVFVQLPRLQKLYLDRNLIAAV 257
Query: 232 VVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKL 291
A GL+++ LDLSHN +AG L T P L L+VL ++HN +S+R L L
Sbjct: 258 APGAFLGLKALRWLDLSHNRVAGLL-EDTFPGLLGLRVLRLSHNAIASLRPRTFKDLHFL 316
Query: 292 TSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRA 351
L HN+I L + SF L L L L HN++ V + L+N+ ++LS N LR
Sbjct: 317 EELQLGHNRIRQLAERSFEGLGQLEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGNCLRN 376
Query: 352 LTQDLITPLKSLQELRLD 369
L + + L L L L+
Sbjct: 377 LPEQVFRGLGKLHSLHLE 394
Score = 288 (106.4 bits), Expect = 8.0e-23, Sum P(2) = 8.0e-23
Identities = 87/298 (29%), Positives = 139/298 (46%)
Query: 98 SLLDCTL--SNVTVLPGKFLEGV-TLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNL 154
SL D L +++ VLP G+ +L LV++ L + F GL+ L+ L L N
Sbjct: 171 SLWDLNLGWNSLAVLPDAAFRGLGSLRELVLAGNRLAYLQPALFSGLAE-LRELDLSRNA 229
Query: 155 LSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAP 214
L + + L P L +L L N + + +F GL +L +LDLS+N++ L +D
Sbjct: 230 LRAIKANVFVQL-PRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPG 288
Query: 215 LVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAH 274
L+ LRVLRL N + + L + +L L HN + L + L L+VL++ H
Sbjct: 289 LLGLRVLRLSHNAIASLRPRTFKDLHFLEELQLGHNRIR-QLAERSFEGLGQLEVLTLDH 347
Query: 275 NQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLA 334
NQ V+ GA GL + ++ N + L + FR L L L L + + + +
Sbjct: 348 NQLQEVKAGAFLGLTNVAVMNLSGNCLRNLPEQVFRGLGKLHSLHLEGSCLGRIRPHTFT 407
Query: 335 HLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELI 392
LS L L L N L + + + L L EL L N ++ P ++ G ++ L+
Sbjct: 408 GLSGLRRLFLKDNGLVGIEEQSLWGLAELLELDLTSNQLTHLPHRLFQGLGKLEYLLL 465
Score = 276 (102.2 bits), Expect = 6.9e-21, P = 6.9e-21
Identities = 82/265 (30%), Positives = 122/265 (46%)
Query: 109 VLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAP 168
V PG FL L L +S + + + F GL L+ L L +N ++ + L
Sbjct: 257 VAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLLG-LRVLRLSHNAIASLRPRTFKDLH- 314
Query: 169 NLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRL 228
L+ L L HN++ +L SF+GL L L L +N+L + L + V+ L GN L
Sbjct: 315 FLEELQLGHNRIRQLAERSFEGLGQLEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGNCL 374
Query: 229 TVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGL 288
+GL + L L + L G + P T LS L+ L + N + +L GL
Sbjct: 375 RNLPEQVFRGLGKLHSLHLEGSCL-GRIRPHTFTGLSGLRRLFLKDNGLVGIEEQSLWGL 433
Query: 289 DKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNF 348
+L L NQ+ L F+ L L +L L+ NR+ + +L L LD+SHN
Sbjct: 434 AELLELDLTSNQLTHLPHRLFQGLGKLEYLLLSRNRLAELPADALGPLQRAFWLDVSHNR 493
Query: 349 LRALTQDLITPLKSLQELRLDDNDI 373
L AL L+ PL L+ L L +N +
Sbjct: 494 LEALPNSLLAPLGRLRYLSLRNNSL 518
Score = 259 (96.2 bits), Expect = 2.7e-21, Sum P(2) = 2.7e-21
Identities = 91/288 (31%), Positives = 129/288 (44%)
Query: 102 CTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTS 161
C+ N+T LP + G T L + L ++ AF LSS L L L L +
Sbjct: 60 CSSRNLTRLPDG-VPGGT-QALWLDGNNLSSVPPAAFQNLSS-LGFLNLQGGQLGSLEPQ 116
Query: 162 ALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVL 221
AL L NL L L NQL L +F +L L LS N+L L L +L L
Sbjct: 117 ALLGLE-NLCHLHLERNQLRSLALGTFAHTPALASLGLSNNRLSRLEDGLFEGLGSLWDL 175
Query: 222 RLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVR 281
L N L V AA +GL S+ +L L+ N LA L P+ L+ L+ L ++ N +++
Sbjct: 176 NLGWNSLAVLPDAAFRGLGSLRELVLAGNRLAY-LQPALFSGLAELRELDLSRNALRAIK 234
Query: 282 RGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTT 341
L +L L N I + +F L L LDL+HNR+ + + L L
Sbjct: 235 ANVFVQLPRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLLGLRV 294
Query: 342 LDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDL 389
L LSHN + +L L L+EL+L N I E + G +++
Sbjct: 295 LRLSHNAIASLRPRTFKDLHFLEELQLGHNRIRQLAERSFEGLGQLEV 342
Score = 245 (91.3 bits), Expect = 6.2e-18, Sum P(2) = 6.2e-18
Identities = 79/265 (29%), Positives = 118/265 (44%)
Query: 123 LVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYK 182
L + +L++++ G F + L +LGL NN LS + L D L+L N L
Sbjct: 127 LHLERNQLRSLALGTFAHTPA-LASLGLSNNRLSRLEDGLFEGLGSLWD-LNLGWNSLAV 184
Query: 183 LENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSV 242
L + +F+GL SL L L+ N+L L + L LR L L N L L +
Sbjct: 185 LPDAAFRGLGSLRELVLAGNRLAYLQPALFSGLAELRELDLSRNALRAIKANVFVQLPRL 244
Query: 243 TDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID 302
L L NL+A + P L +L+ L ++HN+ + + GL L L HN I
Sbjct: 245 QKLYLDRNLIAA-VAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHNAIA 303
Query: 303 VLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKS 362
L +F+ L L L L HNRI ++ S L L L L HN L+ + L +
Sbjct: 304 SLRPRTFKDLHFLEELQLGHNRIRQLAERSFEGLGQLEVLTLDHNQLQEVKAGAFLGLTN 363
Query: 363 LQELRLDDNDISMEPECIYVGFNTM 387
+ + L N + PE ++ G +
Sbjct: 364 VAVMNLSGNCLRNLPEQVFRGLGKL 388
Score = 236 (88.1 bits), Expect = 6.4e-17, Sum P(2) = 6.4e-17
Identities = 83/267 (31%), Positives = 120/267 (44%)
Query: 111 PGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNL 170
P F L L +S L+ I F+ L LQ L L NL++ V A L L
Sbjct: 211 PALFSGLAELRELDLSRNALRAIKANVFVQLPR-LQKLYLDRNLIAAVAPGAFLGLKA-L 268
Query: 171 DRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTV 230
LDLSHN++ L +F GL L L LS+N + +L L L L+L NR+
Sbjct: 269 RWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHNAIASLRPRTFKDLHFLEELQLGHNRIRQ 328
Query: 231 SVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDK 290
+ +GL + L L HN L + L+++ V++++ N ++ GL K
Sbjct: 329 LAERSFEGLGQLEVLTLDHNQLQ-EVKAGAFLGLTNVAVMNLSGNCLRNLPEQVFRGLGK 387
Query: 291 LTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLR 350
L SL + + + H+F LS L L L N +V + SL L+ L LDL+ N L
Sbjct: 388 LHSLHLEGSCLGRIRPHTFTGLSGLRRLFLKDNGLVGIEEQSLWGLAELLELDLTSNQLT 447
Query: 351 ALTQDLITPLKSLQELRLDDNDISMEP 377
L L L L+ L L N ++ P
Sbjct: 448 HLPHRLFQGLGKLEYLLLSRNRLAELP 474
Score = 213 (80.0 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 74/241 (30%), Positives = 113/241 (46%)
Query: 159 PTSALAPLAPNLDRLDL--SHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLV 216
P + + + D L + S L +L + G +L +LD N L ++ L
Sbjct: 42 PAACVCSYDDDADELSVFCSSRNLTRLPDGVPGGTQAL-WLD--GNNLSSVPPAAFQNLS 98
Query: 217 TLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQ 276
+L L LQG +L AL GL ++ L L N L L T +L L +++N+
Sbjct: 99 SLGFLNLQGGQLGSLEPQALLGLENLCHLHLERNQLRS-LALGTFAHTPALASLGLSNNR 157
Query: 277 FSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHL 336
S + G GL L L+ N + VL D +FR L +L L LA NR+ + A + L
Sbjct: 158 LSRLEDGLFEGLGSLWDLNLGWNSLAVLPDAAFRGLGSLRELVLAGNRLAYLQPALFSGL 217
Query: 337 SNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMD-LELIYSG 395
+ L LDLS N LRA+ ++ L LQ+L LD N I+ ++G + L+L ++
Sbjct: 218 AELRELDLSRNALRAIKANVFVQLPRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHNR 277
Query: 396 V 396
V
Sbjct: 278 V 278
Score = 203 (76.5 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 77/268 (28%), Positives = 116/268 (43%)
Query: 114 FLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRL 173
F++ L L + + ++ GAF+GL + L+ L L +N ++ + L L L
Sbjct: 238 FVQLPRLQKLYLDRNLIAAVAPGAFLGLKA-LRWLDLSHNRVAGLLEDTFPGLL-GLRVL 295
Query: 174 DLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVV 233
LSHN + L +FK L L L L +N++ L++ L L VL L N+L
Sbjct: 296 RLSHNAIASLRPRTFKDLHFLEELQLGHNRIRQLAERSFEGLGQLEVLTLDHNQLQEVKA 355
Query: 234 AALQGLRSVTDLDLSHNLLAGPLGPSTVPR-LSSLKVLSIAHNQFSSVRRGALAGLDKLT 292
A GL +V ++LS N L P V R L L L + + +R GL L
Sbjct: 356 GAFLGLTNVAVMNLSGNCLRNL--PEQVFRGLGKLHSLHLEGSCLGRIRPHTFTGLSGLR 413
Query: 293 SLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRAL 352
L N + +E+ S L+ L LDL N++ + L L L LS N L L
Sbjct: 414 RLFLKDNGLVGIEEQSLWGLAELLELDLTSNQLTHLPHRLFQGLGKLEYLLLSRNRLAEL 473
Query: 353 TQDLITPLKSLQELRLDDNDISMEPECI 380
D + PL+ L + N + P +
Sbjct: 474 PADALGPLQRAFWLDVSHNRLEALPNSL 501
Score = 185 (70.2 bits), Expect = 7.1e-11, P = 7.1e-11
Identities = 79/276 (28%), Positives = 123/276 (44%)
Query: 100 LDCTLSNVTVLPGKFLEGVT-LHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVV 158
LD + + V L G+ L L +S + ++ F L L+ L L +N + +
Sbjct: 271 LDLSHNRVAGLLEDTFPGLLGLRVLRLSHNAIASLRPRTFKDLHF-LEELQLGHNRIRQL 329
Query: 159 PTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTL 218
+ L L+ L L HNQL +++ +F GL+++ ++LS N L L + L L
Sbjct: 330 AERSFEGLG-QLEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGNCLRNLPEQVFRGLGKL 388
Query: 219 RVLRLQGN---RLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHN 275
L L+G+ R+ L GLR L L N L G + ++ L+ L L + N
Sbjct: 389 HSLHLEGSCLGRIRPHTFTGLSGLRR---LFLKDNGLVG-IEEQSLWGLAELLELDLTSN 444
Query: 276 QFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAH 335
Q + + GL KL L N++ L + L LD++HNR+ A+ + LA
Sbjct: 445 QLTHLPHRLFQGLGKLEYLLLSRNRLAELPADALGPLQRAFWLDVSHNRLEALPNSLLAP 504
Query: 336 LSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
L L L L +N LR T P L+ L L+ N
Sbjct: 505 LGRLRYLSLRNNSLRTFTPQ--PP--GLERLWLEGN 536
Score = 71 (30.1 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L+VL ++HN +S+R L L L HN+I L + SF +
Sbjct: 289 LLGLRVLRLSHNAIASLRPRTFKDLHFLEELQLGHNRIRQLAERSFEGL 337
Score = 67 (28.6 bits), Expect = 2.7e-21, Sum P(2) = 2.7e-21
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
L L+VL++ HNQ V+ GA GL + ++ N + L + F
Sbjct: 337 LGQLEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGNCLRNLPEQVF 382
Score = 60 (26.2 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 13/46 (28%), Positives = 24/46 (52%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
L L+ L + HN+ + + GL +L L+ HNQ+ ++ +F
Sbjct: 313 LHFLEELQLGHNRIRQLAERSFEGLGQLEVLTLDHNQLQEVKAGAF 358
Score = 58 (25.5 bits), Expect = 3.4e-15, Sum P(2) = 3.4e-15
Identities = 14/49 (28%), Positives = 24/49 (48%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L +L+ L ++HN+ + + GL L L HN I L +F ++
Sbjct: 265 LKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHNAIASLRPRTFKDL 313
Score = 51 (23.0 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 12/51 (23%), Positives = 27/51 (52%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNVIG 694
L+++ V++++ N ++ GL KL SL + + + H+F+ + G
Sbjct: 361 LTNVAVMNLSGNCLRNLPEQVFRGLGKLHSLHLEGSCLGRIRPHTFTGLSG 411
Score = 50 (22.7 bits), Expect = 3.0e-27, Sum P(2) = 3.0e-27
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 650 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
L ++HN+ ++ LA L +L LS +N +
Sbjct: 487 LDVSHNRLEALPNSLLAPLGRLRYLSLRNNSL 518
Score = 49 (22.3 bits), Expect = 3.8e-27, Sum P(2) = 3.8e-27
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL 684
L L+ L ++ N+ + + AL L + L HN+++ L
Sbjct: 457 LGKLEYLLLSRNRLAELPADALGPLQRAFWLDVSHNRLEAL 497
Score = 46 (21.3 bits), Expect = 7.9e-27, Sum P(2) = 7.9e-27
Identities = 14/49 (28%), Positives = 21/49 (42%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
LS L+ L + N + +L GL +L L NQ+ L F +
Sbjct: 409 LSGLRRLFLKDNGLVGIEEQSLWGLAELLELDLTSNQLTHLPHRLFQGL 457
Score = 40 (19.1 bits), Expect = 3.4e-26, Sum P(2) = 3.4e-26
Identities = 11/38 (28%), Positives = 17/38 (44%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
L+ L L + NQ + + GL KL L N++
Sbjct: 433 LAELLELDLTSNQLTHLPHRLFQGLGKLEYLLLSRNRL 470
>WB|WBGene00002282 [details] [associations]
symbol:let-4 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0002064
"epithelial cell development" evidence=IMP] [GO:0035150 "regulation
of tube size" evidence=IMP] [GO:0045177 "apical part of cell"
evidence=IDA] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0009792
GO:GO:0006898 GO:GO:0040010 GO:GO:0002119 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GO:GO:0045177 GO:GO:0040011
GO:GO:0040018 GO:GO:0002064 GeneTree:ENSGT00700000104286
GO:GO:0035150 EMBL:Z79598 EMBL:JQ292907 RefSeq:NP_510425.2
ProteinModelPortal:Q93373 SMR:Q93373 STRING:Q93373
EnsemblMetazoa:C44H4.2 GeneID:181554 KEGG:cel:CELE_C44H4.2
CTD:181554 WormBase:C44H4.2 HOGENOM:HOG000018354 OMA:PLVCTEN
Uniprot:Q93373
Length = 773
Score = 298 (110.0 bits), Expect = 2.5e-25, Sum P(2) = 2.5e-25
Identities = 89/314 (28%), Positives = 151/314 (48%)
Query: 64 CACDLPHT-LRCTANKSDLYAISESLRGLEPDER-VSLLDCTLSNVTVLPGKFLEGVTLH 121
C C H+ + + S I + +R + + L + + LP F G+ +
Sbjct: 29 CFCSEVHSGIVLDCSNSSASGILQIIRTNQAQVGLIQSLTMNQAELVELPPNFFSGLFIR 88
Query: 122 GLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLY 181
L +S ++K I D AF G++ L+ + L +NL+ VP +ALA L PNL RLDLS+N +
Sbjct: 89 RLDLSQNKIKKIDDAAFAGINPVLEEVVLNHNLIEKVPAAALAGL-PNLLRLDLSNNSIV 147
Query: 182 KL-ENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLV-TLRVLRLQGNRLTVSVVAALQGL 239
++ E F L+ L ++L NK+ ++ + +++ + L N +T +A++GL
Sbjct: 148 EIQEQEIFPNLNKLYDINLGSNKIFSIHTSTFQNVKNSIQTINLGHNNMTAVPSSAIRGL 207
Query: 240 RSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 299
+ + L L N + L L L +L++A NQ + R A + L L N
Sbjct: 208 KQLQSLHLHKNRIE-QLDALNFLNLPVLNLLNLAGNQIHELNRQAFLNVPSLRYLYLSGN 266
Query: 300 QIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITP 359
+I L + F+ L LDL +N I A+ SL+ L L L L+HN + ++ + T
Sbjct: 267 KITKLTAYQFQTFEQLEMLDLTNNEIGAIPANSLSGLKQLRQLYLAHNKISNISSNAFTN 326
Query: 360 LKSLQELRLDDNDI 373
S+ L L N++
Sbjct: 327 -SSIVVLVLSSNEL 339
Score = 232 (86.7 bits), Expect = 7.9e-16, P = 7.9e-16
Identities = 71/269 (26%), Positives = 130/269 (48%)
Query: 120 LHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQ 179
L+ + + S ++ +I F + + +Q + L +N ++ VP+SA+ L L L L N+
Sbjct: 161 LYDINLGSNKIFSIHTSTFQNVKNSIQTINLGHNNMTAVPSSAIRGLK-QLQSLHLHKNR 219
Query: 180 LYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGL 239
+ +L+ +F L LN L+L+ N++ L++ + +LR L L GN++T Q
Sbjct: 220 IEQLDALNFLNLPVLNLLNLAGNQIHELNRQAFLNVPSLRYLYLSGNKITKLTAYQFQTF 279
Query: 240 RSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 299
+ LDL++N + G + +++ L L+ L +AHN+ S++ A + L N
Sbjct: 280 EQLEMLDLTNNEI-GAIPANSLSGLKQLRQLYLAHNKISNISSNAFTN-SSIVVLVLSSN 337
Query: 300 QIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITP 359
++ L L L + N+I ++ + ++L LDL+ N LT+ I P
Sbjct: 338 ELKTLTAGIISGLPNLQQVSFRDNQIKTINRNAFYDAASLVMLDLAKN---QLTE--IAP 392
Query: 360 LKSLQELRLDDNDISME--PECIYVGFNT 386
L +L L D+S P+ Y FN+
Sbjct: 393 TTFLAQLNLLLVDLSENKLPKTPYSAFNS 421
Score = 222 (83.2 bits), Expect = 9.8e-15, P = 9.8e-15
Identities = 79/287 (27%), Positives = 139/287 (48%)
Query: 68 LPHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTL-SN-VTVLPGKFLEGV--TLHGL 123
LP+ LR + + + I E + + P+ L D L SN + + + V ++ +
Sbjct: 133 LPNLLRLDLSNNSIVEIQE--QEIFPNLN-KLYDINLGSNKIFSIHTSTFQNVKNSIQTI 189
Query: 124 VISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKL 183
+ + + A GL LQ+L L N + + L P L+ L+L+ NQ+++L
Sbjct: 190 NLGHNNMTAVPSSAIRGLKQ-LQSLHLHKNRIEQLDALNFLNL-PVLNLLNLAGNQIHEL 247
Query: 184 ENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVT 243
+F + SL +L LS NK+ L+ L +L L N + +L GL+ +
Sbjct: 248 NRQAFLNVPSLRYLYLSGNKITKLTAYQFQTFEQLEMLDLTNNEIGAIPANSLSGLKQLR 307
Query: 244 DLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDV 303
L L+HN ++ + + SS+ VL ++ N+ ++ G ++GL L +S NQI
Sbjct: 308 QLYLAHNKISN-ISSNAFTN-SSIVVLVLSSNELKTLTAGIISGLPNLQQVSFRDNQIKT 365
Query: 304 LEDHSFRALSTLSHLDLAHNRIVAVSGAS-LAHLSNLTTLDLSHNFL 349
+ ++F ++L LDLA N++ ++ + LA L NL +DLS N L
Sbjct: 366 INRNAFYDAASLVMLDLAKNQLTEIAPTTFLAQL-NLLLVDLSENKL 411
Score = 216 (81.1 bits), Expect = 3.4e-16, Sum P(2) = 3.4e-16
Identities = 73/283 (25%), Positives = 135/283 (47%)
Query: 99 LLDCTLSNVT----VLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNL 154
+LDC+ S+ + ++ + + L ++ EL + F GL ++ L L N
Sbjct: 39 VLDCSNSSASGILQIIRTNQAQVGLIQSLTMNQAELVELPPNFFSGLF--IRRLDLSQNK 96
Query: 155 LSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAP 214
+ + +A A + P L+ + L+HN + K+ + GL +L LDLS N ++ + + + P
Sbjct: 97 IKKIDDAAFAGINPVLEEVVLNHNLIEKVPAAALAGLPNLLRLDLSNNSIVEIQEQEIFP 156
Query: 215 -LVTLRVLRLQGNRLTVSVVAALQGLR-SVTDLDLSHNLLAGPLGPSTVPR-LSSLKVLS 271
L L + L N++ + Q ++ S+ ++L HN + PS+ R L L+ L
Sbjct: 157 NLNKLYDINLGSNKIFSIHTSTFQNVKNSIQTINLGHNNMTAV--PSSAIRGLKQLQSLH 214
Query: 272 IAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGA 331
+ N+ + L L L+ NQI L +F + +L +L L+ N+I ++
Sbjct: 215 LHKNRIEQLDALNFLNLPVLNLLNLAGNQIHELNRQAFLNVPSLRYLYLSGNKITKLTAY 274
Query: 332 SLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 374
L LDL++N + A+ + ++ LK L++L L N IS
Sbjct: 275 QFQTFEQLEMLDLTNNEIGAIPANSLSGLKQLRQLYLAHNKIS 317
Score = 211 (79.3 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 72/256 (28%), Positives = 133/256 (51%)
Query: 126 SSGELKNI-SDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLE 184
+SG L+ I ++ A +GL +Q+L + L +P + + L + RLDLS N++ K++
Sbjct: 47 ASGILQIIRTNQAQVGL---IQSLTMNQAELVELPPNFFSGLF--IRRLDLSQNKIKKID 101
Query: 185 NTSFKGLSS-LNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLT-VSVVAALQGLRSV 242
+ +F G++ L + L++N + + LA L L L L N + + L +
Sbjct: 102 DAAFAGINPVLEEVVLNHNLIEKVPAAALAGLPNLLRLDLSNNSIVEIQEQEIFPNLNKL 161
Query: 243 TDLDLSHNLLAGPLGPSTVPRL-SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 301
D++L N + + ST + +S++ +++ HN ++V A+ GL +L SL H N+I
Sbjct: 162 YDINLGSNKIFS-IHTSTFQNVKNSIQTINLGHNNMTAVPSSAIRGLKQLQSLHLHKNRI 220
Query: 302 DVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLK 361
+ L+ +F L L+ L+LA N+I ++ + ++ +L L LS N + LT +
Sbjct: 221 EQLDALNFLNLPVLNLLNLAGNQIHELNRQAFLNVPSLRYLYLSGNKITKLTAYQFQTFE 280
Query: 362 SLQELRLDDNDISMEP 377
L+ L L +N+I P
Sbjct: 281 QLEMLDLTNNEIGAIP 296
Score = 208 (78.3 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 68/296 (22%), Positives = 138/296 (46%)
Query: 100 LDCTLSNVTVLPGKFLEGVT--LHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSV 157
LD + + + + G+ L +V++ ++ + A GL + L+ L L NN +
Sbjct: 90 LDLSQNKIKKIDDAAFAGINPVLEEVVLNHNLIEKVPAAALAGLPNLLR-LDLSNNSIVE 148
Query: 158 VPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGL-SSLNFLDLSYNKLMTLSQDCLAPLV 216
+ + P L ++L N+++ + ++F+ + +S+ ++L +N + + + L
Sbjct: 149 IQEQEIFPNLNKLYDINLGSNKIFSIHTSTFQNVKNSIQTINLGHNNMTAVPSSAIRGLK 208
Query: 217 TLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQ 276
L+ L L NR+ L + L+L+ N + L + SL+ L ++ N+
Sbjct: 209 QLQSLHLHKNRIEQLDALNFLNLPVLNLLNLAGNQIH-ELNRQAFLNVPSLRYLYLSGNK 267
Query: 277 FSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHL 336
+ + ++L L +N+I + +S L L L LAHN+I +S + +
Sbjct: 268 ITKLTAYQFQTFEQLEMLDLTNNEIGAIPANSLSGLKQLRQLYLAHNKISNISSNAFTN- 326
Query: 337 SNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI-SMEPECIYVGFNTMDLEL 391
S++ L LS N L+ LT +I+ L +LQ++ DN I ++ Y + + L+L
Sbjct: 327 SSIVVLVLSSNELKTLTAGIISGLPNLQQVSFRDNQIKTINRNAFYDAASLVMLDL 382
Score = 68 (29.0 bits), Expect = 2.5e-25, Sum P(2) = 2.5e-25
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 645 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
SS+ VL ++ N+ ++ G ++GL L +S NQI + ++F
Sbjct: 327 SSIVVLVLSSNELKTLTAGIISGLPNLQQVSFRDNQIKTINRNAF 371
Score = 46 (21.3 bits), Expect = 4.9e-23, Sum P(2) = 4.9e-23
Identities = 12/46 (26%), Positives = 20/46 (43%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
L +L+ +S NQ ++ R A L L NQ+ + +F
Sbjct: 350 LPNLQQVSFRDNQIKTINRNAFYDAASLVMLDLAKNQLTEIAPTTF 395
>UNIPROTKB|F1LRE2 [details] [associations]
symbol:Igfals "Insulin-like growth factor-binding protein
complex acid labile subunit" species:10116 "Rattus norvegicus"
[GO:0005634 "nucleus" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
RGD:68429 GO:GO:0005634 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GeneTree:ENSGT00690000101816 IPI:IPI00202416
OMA:FCGLGEL Ensembl:ENSRNOT00000020233 ArrayExpress:F1LRE2
Uniprot:F1LRE2
Length = 602
Score = 299 (110.3 bits), Expect = 4.8e-25, Sum P(2) = 4.8e-25
Identities = 86/289 (29%), Positives = 140/289 (48%)
Query: 105 SNVTVLPGKFLEGV-TLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSAL 163
+++ VLP +G+ LH LV++ +L + F GL L+ L L N L V +
Sbjct: 179 NSLVVLPDTVFQGLGNLHELVLAGNKLTYLQPALFCGLGE-LRELDLSRNALRSVKANVF 237
Query: 164 APLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRL 223
L P L +L L N + + +F G+ +L +LDLS+N++ L +D L+ L VLRL
Sbjct: 238 VHL-PRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRL 296
Query: 224 QGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRG 283
N + + L + +L L HN + LG T L L+VL++ NQ + VR G
Sbjct: 297 AHNAIASLRPRTFKDLHFLEELQLGHNRIR-QLGERTFEGLGQLEVLTLNDNQITEVRVG 355
Query: 284 ALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLD 343
A +GL + ++ N + L + F+ L L L L H+ + V + A LS L L
Sbjct: 356 AFSGLFNVAVMNLSGNCLRSLPERVFQGLDKLHSLHLEHSCLGHVRLHTFAGLSGLRRLF 415
Query: 344 LSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELI 392
L N + ++ + + L L EL L N ++ P ++ G ++ L+
Sbjct: 416 LRDNSISSIEEQSLAGLSELLELDLTTNRLTHLPRQLFQGLGHLEYLLL 464
Score = 270 (100.1 bits), Expect = 3.2e-20, P = 3.2e-20
Identities = 81/271 (29%), Positives = 127/271 (46%)
Query: 109 VLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAP 168
V P FL L L +S + + + F GL L L L +N ++ + L
Sbjct: 256 VAPRAFLGMKALRWLDLSHNRVAGLMEDTFPGLLG-LHVLRLAHNAIASLRPRTFKDLH- 313
Query: 169 NLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRL 228
L+ L L HN++ +L +F+GL L L L+ N++ + + L + V+ L GN L
Sbjct: 314 FLEELQLGHNRIRQLGERTFEGLGQLEVLTLNDNQITEVRVGAFSGLFNVAVMNLSGNCL 373
Query: 229 TVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGL 288
QGL + L L H+ L G + T LS L+ L + N SS+ +LAGL
Sbjct: 374 RSLPERVFQGLDKLHSLHLEHSCL-GHVRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGL 432
Query: 289 DKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNF 348
+L L N++ L F+ L L +L L++N++ +S L L LD+SHN
Sbjct: 433 SELLELDLTTNRLTHLPRQLFQGLGHLEYLLLSYNQLTTLSAEVLGPLQRAFWLDISHNH 492
Query: 349 LRALTQDLITPLKSLQELRLDDNDI-SMEPE 378
L L + L + L L+ L L +N + + P+
Sbjct: 493 LETLAEGLFSSLGRLRYLSLRNNSLQTFSPQ 523
Score = 266 (98.7 bits), Expect = 7.0e-22, Sum P(2) = 7.0e-22
Identities = 96/310 (30%), Positives = 143/310 (46%)
Query: 74 CTANKSD------LYAISESLRGLEPDERVSLLDCTL--SNVTVLPGKFLEGVT-LHGLV 124
CT + D ++ S++L L D VS L +N++ +P + ++ L L
Sbjct: 44 CTCSHDDYTDELSVFCSSKNLTHLPDDIPVSTRALWLDGNNLSSIPSAAFQNLSSLDFLN 103
Query: 125 ISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLE 184
+ L+++ A +GL + L L L N L + L P+L L LS N L +LE
Sbjct: 104 LQGSWLRSLEPQALLGLQN-LYHLHLERNRLRNLAVG-LFTHTPSLASLSLSSNLLGRLE 161
Query: 185 NTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTD 244
F+GLS L L+L +N L+ L L L L L GN+LT A GL + +
Sbjct: 162 EGLFQGLSHLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGNKLTYLQPALFCGLGELRE 221
Query: 245 LDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL 304
LDLS N L + + L L+ L + N ++V A G+ L L HN++ L
Sbjct: 222 LDLSRNALRS-VKANVFVHLPRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVAGL 280
Query: 305 EDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQ 364
+ +F L L L LAHN I ++ + L L L L HN +R L + L L+
Sbjct: 281 MEDTFPGLLGLHVLRLAHNAIASLRPRTFKDLHFLEELQLGHNRIRQLGERTFEGLGQLE 340
Query: 365 ELRLDDNDIS 374
L L+DN I+
Sbjct: 341 VLTLNDNQIT 350
Score = 232 (86.7 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 77/262 (29%), Positives = 118/262 (45%)
Query: 120 LHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQ 179
L L + + ++ AF+G+ + L+ L L +N ++ + L L L L+HN
Sbjct: 243 LQKLYLDRNLITAVAPRAFLGMKA-LRWLDLSHNRVAGLMEDTFPGLL-GLHVLRLAHNA 300
Query: 180 LYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGL 239
+ L +FK L L L L +N++ L + L L VL L N++T V A GL
Sbjct: 301 IASLRPRTFKDLHFLEELQLGHNRIRQLGERTFEGLGQLEVLTLNDNQITEVRVGAFSGL 360
Query: 240 RSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 299
+V ++LS N L L L L L + H+ VR AGL L L N
Sbjct: 361 FNVAVMNLSGNCLRS-LPERVFQGLDKLHSLHLEHSCLGHVRLHTFAGLSGLRRLFLRDN 419
Query: 300 QIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITP 359
I +E+ S LS L LDL NR+ + L +L L LS+N L L+ +++ P
Sbjct: 420 SISSIEEQSLAGLSELLELDLTTNRLTHLPRQLFQGLGHLEYLLLSYNQLTTLSAEVLGP 479
Query: 360 LKSLQELRLDDNDISMEPECIY 381
L+ L + N + E ++
Sbjct: 480 LQRAFWLDISHNHLETLAEGLF 501
Score = 188 (71.2 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 64/205 (31%), Positives = 92/205 (44%)
Query: 193 SLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLL 252
S L L N L ++ L +L L LQG+ L AL GL+++ L L N L
Sbjct: 74 STRALWLDGNNLSSIPSAAFQNLSSLDFLNLQGSWLRSLEPQALLGLQNLYHLHLERNRL 133
Query: 253 AGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRAL 312
L SL LS++ N + G GL L L+ N + VL D F+ L
Sbjct: 134 RN-LAVGLFTHTPSLASLSLSSNLLGRLEEGLFQGLSHLWDLNLGWNSLVVLPDTVFQGL 192
Query: 313 STLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDND 372
L L LA N++ + A L L LDLS N LR++ ++ L LQ+L LD N
Sbjct: 193 GNLHELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVKANVFVHLPRLQKLYLDRNL 252
Query: 373 ISMEPECIYVGFNTMD-LELIYSGV 396
I+ ++G + L+L ++ V
Sbjct: 253 ITAVAPRAFLGMKALRWLDLSHNRV 277
Score = 68 (29.0 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 21/64 (32%), Positives = 29/64 (45%)
Query: 630 SDSRYVKLQATTIL-LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHS 688
S +R L T L L VL +AHN +S+R L L L HN+I L + +
Sbjct: 273 SHNRVAGLMEDTFPGLLGLHVLRLAHNAIASLRPRTFKDLHFLEELQLGHNRIRQLGERT 332
Query: 689 FSNV 692
F +
Sbjct: 333 FEGL 336
Score = 65 (27.9 bits), Expect = 7.0e-22, Sum P(2) = 7.0e-22
Identities = 19/74 (25%), Positives = 39/74 (52%)
Query: 621 QEDDINRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQ 680
Q + + N++ V++ A + L + + V++++ N S+ GLDKL SL H+
Sbjct: 338 QLEVLTLNDNQITEVRVGAFSGLFN-VAVMNLSGNCLRSLPERVFQGLDKLHSLHLEHSC 396
Query: 681 IDVLEDHSFSNVIG 694
+ + H+F+ + G
Sbjct: 397 LGHVRLHTFAGLSG 410
Score = 62 (26.9 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L+VL++ NQ + VR GA +GL + ++ N + L + F +
Sbjct: 336 LGQLEVLTLNDNQITEVRVGAFSGLFNVAVMNLSGNCLRSLPERVFQGL 384
Score = 62 (26.9 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 19/59 (32%), Positives = 29/59 (49%)
Query: 634 YVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
+V+L T LS L+ L + N SS+ +LAGL +L L N++ L F +
Sbjct: 399 HVRLH-TFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTTNRLTHLPRQLFQGL 456
Score = 59 (25.8 bits), Expect = 4.8e-25, Sum P(2) = 4.8e-25
Identities = 13/49 (26%), Positives = 26/49 (53%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L+ L +++NQ +++ L L + L HN ++ L + FS++
Sbjct: 456 LGHLEYLLLSYNQLTTLSAEVLGPLQRAFWLDISHNHLETLAEGLFSSL 504
Score = 56 (24.8 bits), Expect = 6.1e-21, Sum P(2) = 6.1e-21
Identities = 15/49 (30%), Positives = 21/49 (42%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L L + H+ VR AGL L L N I +E+ S + +
Sbjct: 384 LDKLHSLHLEHSCLGHVRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGL 432
Score = 55 (24.4 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 14/49 (28%), Positives = 24/49 (48%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L+ L + HN+ + GL +L L+ + NQI + +FS +
Sbjct: 312 LHFLEELQLGHNRIRQLGERTFEGLGQLEVLTLNDNQITEVRVGAFSGL 360
Score = 55 (24.4 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
+ +L+ L ++HN+ + + GL L L HN I L +F ++
Sbjct: 264 MKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRLAHNAIASLRPRTFKDL 312
Score = 52 (23.4 bits), Expect = 2.6e-24, Sum P(2) = 2.6e-24
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 650 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
L I+HN ++ G + L +L LS +N +
Sbjct: 486 LDISHNHLETLAEGLFSSLGRLRYLSLRNNSL 517
Score = 46 (21.3 bits), Expect = 6.7e-20, Sum P(2) = 6.7e-20
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL 684
LS L L + N+ + + R GL L L +NQ+ L
Sbjct: 432 LSELLELDLTTNRLTHLPRQLFQGLGHLEYLLLSYNQLTTL 472
>RGD|68429 [details] [associations]
symbol:Igfals "insulin-like growth factor binding protein, acid
labile subunit" species:10116 "Rattus norvegicus" [GO:0005520
"insulin-like growth factor binding" evidence=IDA] [GO:0005634
"nucleus" evidence=ISO] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0042567 "insulin-like growth
factor ternary complex" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 RGD:68429
GO:GO:0043231 GO:GO:0005634 GO:GO:0007165 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0007155 CTD:3483 HOGENOM:HOG000033909 HOVERGEN:HBG000327
OrthoDB:EOG4FFD1R GO:GO:0005520 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0042567 EMBL:S46785 IPI:IPI00202416 PIR:JC1282
RefSeq:NP_445781.2 UniGene:Rn.7327 ProteinModelPortal:P35859
STRING:P35859 PRIDE:P35859 GeneID:79438 KEGG:rno:79438
UCSC:RGD:68429 InParanoid:P35859 NextBio:614812 ArrayExpress:P35859
Genevestigator:P35859 GermOnline:ENSRNOG00000015061 Uniprot:P35859
Length = 603
Score = 298 (110.0 bits), Expect = 6.4e-25, Sum P(2) = 6.4e-25
Identities = 86/289 (29%), Positives = 140/289 (48%)
Query: 105 SNVTVLPGKFLEGV-TLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSAL 163
+++ VLP +G+ LH LV++ +L + F GL L+ L L N L V +
Sbjct: 180 NSLVVLPDTVFQGLGNLHELVLAGNKLTYLQPALFCGLGE-LRELDLSRNALRSVKANVF 238
Query: 164 APLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRL 223
L P L +L L N + + +F G+ +L +LDLS+N++ L +D L+ L VLRL
Sbjct: 239 VHL-PRLQKLYLDRNLITAVAPGAFLGMKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRL 297
Query: 224 QGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRG 283
N + + L + +L L HN + LG T L L+VL++ NQ + VR G
Sbjct: 298 AHNAIASLRPRTFKDLHFLEELQLGHNRIR-QLGERTFEGLGQLEVLTLNDNQITEVRVG 356
Query: 284 ALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLD 343
A +GL + ++ N + L + F+ L L L L H+ + V + A LS L L
Sbjct: 357 AFSGLFNVAVMNLSGNCLRSLPERVFQGLDKLHSLHLEHSCLGHVRLHTFAGLSGLRRLF 416
Query: 344 LSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELI 392
L N + ++ + + L L EL L N ++ P ++ G ++ L+
Sbjct: 417 LRDNSISSIEEQSLAGLSELLELDLTTNRLTHLPRQLFQGLGHLEYLLL 465
Score = 275 (101.9 bits), Expect = 8.9e-21, P = 8.9e-21
Identities = 81/271 (29%), Positives = 128/271 (47%)
Query: 109 VLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAP 168
V PG FL L L +S + + + F GL L L L +N ++ + L
Sbjct: 257 VAPGAFLGMKALRWLDLSHNRVAGLMEDTFPGLLG-LHVLRLAHNAIASLRPRTFKDLH- 314
Query: 169 NLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRL 228
L+ L L HN++ +L +F+GL L L L+ N++ + + L + V+ L GN L
Sbjct: 315 FLEELQLGHNRIRQLGERTFEGLGQLEVLTLNDNQITEVRVGAFSGLFNVAVMNLSGNCL 374
Query: 229 TVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGL 288
QGL + L L H+ L G + T LS L+ L + N SS+ +LAGL
Sbjct: 375 RSLPERVFQGLDKLHSLHLEHSCL-GHVRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGL 433
Query: 289 DKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNF 348
+L L N++ L F+ L L +L L++N++ +S L L LD+SHN
Sbjct: 434 SELLELDLTTNRLTHLPRQLFQGLGHLEYLLLSYNQLTTLSAEVLGPLQRAFWLDISHNH 493
Query: 349 LRALTQDLITPLKSLQELRLDDNDI-SMEPE 378
L L + L + L ++ L L +N + + P+
Sbjct: 494 LETLAEGLFSSLGRVRYLSLRNNSLQTFSPQ 524
Score = 274 (101.5 bits), Expect = 8.6e-23, Sum P(2) = 8.6e-23
Identities = 97/310 (31%), Positives = 144/310 (46%)
Query: 74 CTANKSD------LYAISESLRGLEPDERVSLLDCTL--SNVTVLPGKFLEGVT-LHGLV 124
CT + D ++ S++L L D VS L +N++ +P + ++ L L
Sbjct: 45 CTCSHDDYTDELSVFCSSKNLTHLPDDIPVSTRALWLDGNNLSSIPSAAFQNLSSLDFLN 104
Query: 125 ISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLE 184
+ L+++ A +GL + L L L N L + L P+L L LS N L +LE
Sbjct: 105 LQGSWLRSLEPQALLGLQN-LYYLHLERNRLRNLAVG-LFTHTPSLASLSLSSNLLGRLE 162
Query: 185 NTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTD 244
F+GLS L L+L +N L+ L L L L L GN+LT A GL + +
Sbjct: 163 EGLFQGLSHLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGNKLTYLQPALFCGLGELRE 222
Query: 245 LDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL 304
LDLS N L + + L L+ L + N ++V GA G+ L L HN++ L
Sbjct: 223 LDLSRNALRS-VKANVFVHLPRLQKLYLDRNLITAVAPGAFLGMKALRWLDLSHNRVAGL 281
Query: 305 EDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQ 364
+ +F L L L LAHN I ++ + L L L L HN +R L + L L+
Sbjct: 282 MEDTFPGLLGLHVLRLAHNAIASLRPRTFKDLHFLEELQLGHNRIRQLGERTFEGLGQLE 341
Query: 365 ELRLDDNDIS 374
L L+DN I+
Sbjct: 342 VLTLNDNQIT 351
Score = 240 (89.5 bits), Expect = 2.8e-17, Sum P(2) = 2.8e-17
Identities = 78/262 (29%), Positives = 119/262 (45%)
Query: 120 LHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQ 179
L L + + ++ GAF+G+ + L+ L L +N ++ + L L L L+HN
Sbjct: 244 LQKLYLDRNLITAVAPGAFLGMKA-LRWLDLSHNRVAGLMEDTFPGLL-GLHVLRLAHNA 301
Query: 180 LYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGL 239
+ L +FK L L L L +N++ L + L L VL L N++T V A GL
Sbjct: 302 IASLRPRTFKDLHFLEELQLGHNRIRQLGERTFEGLGQLEVLTLNDNQITEVRVGAFSGL 361
Query: 240 RSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 299
+V ++LS N L L L L L + H+ VR AGL L L N
Sbjct: 362 FNVAVMNLSGNCLRS-LPERVFQGLDKLHSLHLEHSCLGHVRLHTFAGLSGLRRLFLRDN 420
Query: 300 QIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITP 359
I +E+ S LS L LDL NR+ + L +L L LS+N L L+ +++ P
Sbjct: 421 SISSIEEQSLAGLSELLELDLTTNRLTHLPRQLFQGLGHLEYLLLSYNQLTTLSAEVLGP 480
Query: 360 LKSLQELRLDDNDISMEPECIY 381
L+ L + N + E ++
Sbjct: 481 LQRAFWLDISHNHLETLAEGLF 502
Score = 186 (70.5 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 64/205 (31%), Positives = 92/205 (44%)
Query: 193 SLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLL 252
S L L N L ++ L +L L LQG+ L AL GL+++ L L N L
Sbjct: 75 STRALWLDGNNLSSIPSAAFQNLSSLDFLNLQGSWLRSLEPQALLGLQNLYYLHLERNRL 134
Query: 253 AGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRAL 312
L SL LS++ N + G GL L L+ N + VL D F+ L
Sbjct: 135 RN-LAVGLFTHTPSLASLSLSSNLLGRLEEGLFQGLSHLWDLNLGWNSLVVLPDTVFQGL 193
Query: 313 STLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDND 372
L L LA N++ + A L L LDLS N LR++ ++ L LQ+L LD N
Sbjct: 194 GNLHELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVKANVFVHLPRLQKLYLDRNL 253
Query: 373 ISMEPECIYVGFNTMD-LELIYSGV 396
I+ ++G + L+L ++ V
Sbjct: 254 ITAVAPGAFLGMKALRWLDLSHNRV 278
Score = 68 (29.0 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 21/64 (32%), Positives = 29/64 (45%)
Query: 630 SDSRYVKLQATTIL-LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHS 688
S +R L T L L VL +AHN +S+R L L L HN+I L + +
Sbjct: 274 SHNRVAGLMEDTFPGLLGLHVLRLAHNAIASLRPRTFKDLHFLEELQLGHNRIRQLGERT 333
Query: 689 FSNV 692
F +
Sbjct: 334 FEGL 337
Score = 65 (27.9 bits), Expect = 8.6e-23, Sum P(2) = 8.6e-23
Identities = 19/74 (25%), Positives = 39/74 (52%)
Query: 621 QEDDINRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQ 680
Q + + N++ V++ A + L + + V++++ N S+ GLDKL SL H+
Sbjct: 339 QLEVLTLNDNQITEVRVGAFSGLFN-VAVMNLSGNCLRSLPERVFQGLDKLHSLHLEHSC 397
Query: 681 IDVLEDHSFSNVIG 694
+ + H+F+ + G
Sbjct: 398 LGHVRLHTFAGLSG 411
Score = 62 (26.9 bits), Expect = 1.8e-22, Sum P(2) = 1.8e-22
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L+VL++ NQ + VR GA +GL + ++ N + L + F +
Sbjct: 337 LGQLEVLTLNDNQITEVRVGAFSGLFNVAVMNLSGNCLRSLPERVFQGL 385
Score = 62 (26.9 bits), Expect = 1.8e-22, Sum P(2) = 1.8e-22
Identities = 19/59 (32%), Positives = 29/59 (49%)
Query: 634 YVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
+V+L T LS L+ L + N SS+ +LAGL +L L N++ L F +
Sbjct: 400 HVRLH-TFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTTNRLTHLPRQLFQGL 457
Score = 59 (25.8 bits), Expect = 6.4e-25, Sum P(2) = 6.4e-25
Identities = 13/49 (26%), Positives = 26/49 (53%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L+ L +++NQ +++ L L + L HN ++ L + FS++
Sbjct: 457 LGHLEYLLLSYNQLTTLSAEVLGPLQRAFWLDISHNHLETLAEGLFSSL 505
Score = 56 (24.8 bits), Expect = 7.5e-22, Sum P(2) = 7.5e-22
Identities = 15/49 (30%), Positives = 21/49 (42%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L L + H+ VR AGL L L N I +E+ S + +
Sbjct: 385 LDKLHSLHLEHSCLGHVRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGL 433
Score = 55 (24.4 bits), Expect = 6.7e-12, Sum P(2) = 6.7e-12
Identities = 14/49 (28%), Positives = 24/49 (48%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L+ L + HN+ + GL +L L+ + NQI + +FS +
Sbjct: 313 LHFLEELQLGHNRIRQLGERTFEGLGQLEVLTLNDNQITEVRVGAFSGL 361
Score = 55 (24.4 bits), Expect = 6.7e-12, Sum P(2) = 6.7e-12
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
+ +L+ L ++HN+ + + GL L L HN I L +F ++
Sbjct: 265 MKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRLAHNAIASLRPRTFKDL 313
Score = 49 (22.3 bits), Expect = 7.1e-24, Sum P(2) = 7.1e-24
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 650 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
L I+HN ++ G + L ++ LS +N +
Sbjct: 487 LDISHNHLETLAEGLFSSLGRVRYLSLRNNSL 518
Score = 46 (21.3 bits), Expect = 8.3e-21, Sum P(2) = 8.3e-21
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL 684
LS L L + N+ + + R GL L L +NQ+ L
Sbjct: 433 LSELLELDLTTNRLTHLPRQLFQGLGHLEYLLLSYNQLTTL 473
>MGI|MGI:107973 [details] [associations]
symbol:Igfals "insulin-like growth factor binding protein,
acid labile subunit" species:10090 "Mus musculus" [GO:0005515
"protein binding" evidence=IPI] [GO:0005520 "insulin-like growth
factor binding" evidence=ISO] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=ISO] [GO:0042567
"insulin-like growth factor ternary complex" evidence=ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 MGI:MGI:107973
GO:GO:0005634 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 CTD:3483
HOVERGEN:HBG000327 OrthoDB:EOG4FFD1R InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 EMBL:U66900 EMBL:AK004926
IPI:IPI00556721 PIR:JC6128 RefSeq:NP_032366.2 UniGene:Mm.3135
ProteinModelPortal:P70389 SMR:P70389 IntAct:P70389 MINT:MINT-217480
STRING:P70389 PaxDb:P70389 PRIDE:P70389 Ensembl:ENSMUST00000050714
GeneID:16005 KEGG:mmu:16005 GeneTree:ENSGT00690000101816
InParanoid:P70389 NextBio:288802 Bgee:P70389 Genevestigator:P70389
GermOnline:ENSMUSG00000046070 GO:GO:0042567 Uniprot:P70389
Length = 603
Score = 299 (110.3 bits), Expect = 2.1e-24, Sum P(2) = 2.1e-24
Identities = 85/289 (29%), Positives = 139/289 (48%)
Query: 105 SNVTVLPGKFLEGV-TLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSAL 163
+++ VLP +G+ LH LV++ +L + GL L+ L L N L V +
Sbjct: 180 NSLVVLPDTVFQGLGNLHELVLAGNKLTYLQPALLCGLGE-LRELDLSRNALRSVKANVF 238
Query: 164 APLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRL 223
L P L +L L N + + +F G+ +L +LDLS+N++ L +D L+ L VLRL
Sbjct: 239 IHL-PRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVAGLLEDTFPGLLGLHVLRL 297
Query: 224 QGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRG 283
N +T + L + +L L HN + LG T L L+VL++ NQ V+ G
Sbjct: 298 AHNAITSLRPRTFKDLHFLEELQLGHNRIR-QLGEKTFEGLGQLEVLTLNDNQIHEVKVG 356
Query: 284 ALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLD 343
A GL + ++ N + L +H F+ L L L L H+ + + + A LS L L
Sbjct: 357 AFFGLFNVAVMNLSGNCLRSLPEHVFQGLGRLHSLHLEHSCLGRIRLHTFAGLSGLRRLF 416
Query: 344 LSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELI 392
L N + ++ + + L L EL L N ++ P ++ G ++ L+
Sbjct: 417 LRDNSISSIEEQSLAGLSELLELDLTANQLTHLPRQLFQGLGQLEYLLL 465
Score = 284 (105.0 bits), Expect = 6.2e-24, Sum P(2) = 6.2e-24
Identities = 97/289 (33%), Positives = 136/289 (47%)
Query: 88 LRGLEPDERVSL-------LDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIG 140
LR LEP + L L+ L ++ G F +L L + + L + +G F G
Sbjct: 110 LRSLEPQALLGLQNLYHLHLERNLLR-SLAAGLFRHTPSLASLSLGNNLLGRLEEGLFRG 168
Query: 141 LSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLS 200
LS L L L N L V+P + L NL L L+ N+L L+ GL L LDLS
Sbjct: 169 LSH-LWDLNLGWNSLVVLPDTVFQGLG-NLHELVLAGNKLTYLQPALLCGLGELRELDLS 226
Query: 201 YNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPST 260
N L ++ + L L+ L L N +T A G++++ LDLSHN +AG L T
Sbjct: 227 RNALRSVKANVFIHLPRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVAGLL-EDT 285
Query: 261 VPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 320
P L L VL +AHN +S+R L L L HN+I L + +F L L L L
Sbjct: 286 FPGLLGLHVLRLAHNAITSLRPRTFKDLHFLEELQLGHNRIRQLGEKTFEGLGQLEVLTL 345
Query: 321 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLD 369
N+I V + L N+ ++LS N LR+L + + L L L L+
Sbjct: 346 NDNQIHEVKVGAFFGLFNVAVMNLSGNCLRSLPEHVFQGLGRLHSLHLE 394
Score = 258 (95.9 bits), Expect = 6.8e-19, P = 6.8e-19
Identities = 81/265 (30%), Positives = 122/265 (46%)
Query: 109 VLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAP 168
V P FL L L +S + + + F GL L L L +N ++ + L
Sbjct: 257 VAPRAFLGMKALRWLDLSHNRVAGLLEDTFPGLLG-LHVLRLAHNAITSLRPRTFKDLH- 314
Query: 169 NLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRL 228
L+ L L HN++ +L +F+GL L L L+ N++ + L + V+ L GN L
Sbjct: 315 FLEELQLGHNRIRQLGEKTFEGLGQLEVLTLNDNQIHEVKVGAFFGLFNVAVMNLSGNCL 374
Query: 229 TVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGL 288
QGL + L L H+ L G + T LS L+ L + N SS+ +LAGL
Sbjct: 375 RSLPEHVFQGLGRLHSLHLEHSCL-GRIRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGL 433
Query: 289 DKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNF 348
+L L NQ+ L F+ L L +L L++N++ +S L L LDLSHN
Sbjct: 434 SELLELDLTANQLTHLPRQLFQGLGQLEYLLLSNNQLTMLSEDVLGPLQRAFWLDLSHNR 493
Query: 349 LRALTQDLITPLKSLQELRLDDNDI 373
L + L + L L+ L L +N +
Sbjct: 494 LETPAEGLFSSLGRLRYLNLRNNSL 518
Score = 241 (89.9 bits), Expect = 8.4e-18, Sum P(2) = 8.4e-18
Identities = 85/275 (30%), Positives = 130/275 (47%)
Query: 105 SNVTVLPGKFLEGV-TLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSAL 163
+ +T L L G+ L L +S L+++ FI L LQ L L NL++ V A
Sbjct: 204 NKLTYLQPALLCGLGELRELDLSRNALRSVKANVFIHLPR-LQKLYLDRNLITAVAPRAF 262
Query: 164 APLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRL 223
+ L LDLSHN++ L +F GL L+ L L++N + +L L L L+L
Sbjct: 263 LGMKA-LRWLDLSHNRVAGLLEDTFPGLLGLHVLRLAHNAITSLRPRTFKDLHFLEELQL 321
Query: 224 QGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRG 283
NR+ +GL + L L+ N + + L ++ V++++ N S+
Sbjct: 322 GHNRIRQLGEKTFEGLGQLEVLTLNDNQIH-EVKVGAFFGLFNVAVMNLSGNCLRSLPEH 380
Query: 284 ALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLD 343
GL +L SL H+ + + H+F LS L L L N I ++ SLA LS L LD
Sbjct: 381 VFQGLGRLHSLHLEHSCLGRIRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELD 440
Query: 344 LSHNFLRALTQDLITPLKSLQELRLDDNDISMEPE 378
L+ N L L + L L L+ L L +N ++M E
Sbjct: 441 LTANQLTHLPRQLFQGLGQLEYLLLSNNQLTMLSE 475
Score = 240 (89.5 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 87/288 (30%), Positives = 123/288 (42%)
Query: 102 CTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTS 161
C+ N+T LP V+ L + L +I AF LSS L L L + L +
Sbjct: 60 CSSRNLTQLPDGI--PVSTRALWLDGNNLSSIPSAAFQNLSS-LDFLNLQGSWLRSLEPQ 116
Query: 162 ALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVL 221
AL L NL L L N L L F+ SL L L N L L + L L L
Sbjct: 117 ALLGLQ-NLYHLHLERNLLRSLAAGLFRHTPSLASLSLGNNLLGRLEEGLFRGLSHLWDL 175
Query: 222 RLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVR 281
L N L V QGL ++ +L L+ N L L P+ + L L+ L ++ N SV+
Sbjct: 176 NLGWNSLVVLPDTVFQGLGNLHELVLAGNKLTY-LQPALLCGLGELRELDLSRNALRSVK 234
Query: 282 RGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTT 341
L +L L N I + +F + L LDL+HNR+ + + L L
Sbjct: 235 ANVFIHLPRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVAGLLEDTFPGLLGLHV 294
Query: 342 LDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDL 389
L L+HN + +L L L+EL+L N I E + G +++
Sbjct: 295 LRLAHNAITSLRPRTFKDLHFLEELQLGHNRIRQLGEKTFEGLGQLEV 342
Score = 225 (84.3 bits), Expect = 5.2e-16, Sum P(2) = 5.2e-16
Identities = 103/367 (28%), Positives = 161/367 (43%)
Query: 120 LHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQ 179
L+ L + L++++ G F S L +L L NNLL + L+ D L+L N
Sbjct: 124 LYHLHLERNLLRSLAAGLFRHTPS-LASLSLGNNLLGRLEEGLFRGLSHLWD-LNLGWNS 181
Query: 180 LYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGL 239
L L +T F+GL +L+ L L+ NKL L L L LR L L N L L
Sbjct: 182 LVVLPDTVFQGLGNLHELVLAGNKLTYLQPALLCGLGELRELDLSRNALRSVKANVFIHL 241
Query: 240 RSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 299
+ L L NL+ + P + +L+ L ++HN+ + + GL L L HN
Sbjct: 242 PRLQKLYLDRNLITA-VAPRAFLGMKALRWLDLSHNRVAGLLEDTFPGLLGLHVLRLAHN 300
Query: 300 QIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITP 359
I L +F+ L L L L HNRI + + L L L L+ N + +
Sbjct: 301 AITSLRPRTFKDLHFLEELQLGHNRIRQLGEKTFEGLGQLEVLTLNDNQIHEVKVGAFFG 360
Query: 360 LKSLQELRLDDNDISMEPECIYVGFNTM-DLELIYSGVWR---HSTLLIPVMLSLCTRSS 415
L ++ + L N + PE ++ G + L L +S + R H+ + + L R +
Sbjct: 361 LFNVAVMNLSGNCLRSLPEHVFQGLGRLHSLHLEHSCLGRIRLHTFAGLSGLRRLFLRDN 420
Query: 416 VVTRYRYCVVLIEGSNILDQSALVLGCSEILALVPTLTSQPLSYVTSLRANVTGLGTVQV 475
+ S+I +QS + G SE+L L LT+ L+++ R GLG ++
Sbjct: 421 SI------------SSIEEQS--LAGLSELLEL--DLTANQLTHLP--RQLFQGLGQLE- 461
Query: 476 YVQLWTN 482
Y+ L N
Sbjct: 462 YLLLSNN 468
Score = 198 (74.8 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 66/205 (32%), Positives = 94/205 (45%)
Query: 193 SLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLL 252
S L L N L ++ L +L L LQG+ L AL GL+++ L L NLL
Sbjct: 75 STRALWLDGNNLSSIPSAAFQNLSSLDFLNLQGSWLRSLEPQALLGLQNLYHLHLERNLL 134
Query: 253 AGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRAL 312
L SL LS+ +N + G GL L L+ N + VL D F+ L
Sbjct: 135 RS-LAAGLFRHTPSLASLSLGNNLLGRLEEGLFRGLSHLWDLNLGWNSLVVLPDTVFQGL 193
Query: 313 STLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDND 372
L L LA N++ + A L L L LDLS N LR++ ++ L LQ+L LD N
Sbjct: 194 GNLHELVLAGNKLTYLQPALLCGLGELRELDLSRNALRSVKANVFIHLPRLQKLYLDRNL 253
Query: 373 ISMEPECIYVGFNTMD-LELIYSGV 396
I+ ++G + L+L ++ V
Sbjct: 254 ITAVAPRAFLGMKALRWLDLSHNRV 278
Score = 175 (66.7 bits), Expect = 8.7e-10, P = 8.7e-10
Identities = 74/276 (26%), Positives = 125/276 (45%)
Query: 100 LDCTLSNVTVLPGKFLEGVT-LHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVV 158
LD + + V L G+ LH L ++ + ++ F L L+ L L +N + +
Sbjct: 271 LDLSHNRVAGLLEDTFPGLLGLHVLRLAHNAITSLRPRTFKDLHF-LEELQLGHNRIRQL 329
Query: 159 PTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTL 218
L L+ L L+ NQ+++++ +F GL ++ ++LS N L +L + L L
Sbjct: 330 GEKTFEGLG-QLEVLTLNDNQIHEVKVGAFFGLFNVAVMNLSGNCLRSLPEHVFQGLGRL 388
Query: 219 RVLRLQGN---RLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHN 275
L L+ + R+ + A L GLR L L N ++ + ++ LS L L + N
Sbjct: 389 HSLHLEHSCLGRIRLHTFAGLSGLRR---LFLRDNSISS-IEEQSLAGLSELLELDLTAN 444
Query: 276 QFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAH 335
Q + + R GL +L L +NQ+ +L + L LDL+HNR+ + +
Sbjct: 445 QLTHLPRQLFQGLGQLEYLLLSNNQLTMLSEDVLGPLQRAFWLDLSHNRLETPAEGLFSS 504
Query: 336 LSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
L L L+L +N L+ P L+ L LD N
Sbjct: 505 LGRLRYLNLRNNSLQTFV-----PQPGLERLWLDAN 535
Score = 66 (28.3 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 17/49 (34%), Positives = 24/49 (48%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L VL +AHN +S+R L L L HN+I L + +F +
Sbjct: 289 LLGLHVLRLAHNAITSLRPRTFKDLHFLEELQLGHNRIRQLGEKTFEGL 337
Score = 65 (27.9 bits), Expect = 6.2e-24, Sum P(2) = 6.2e-24
Identities = 17/49 (34%), Positives = 24/49 (48%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
LS L+ L + N SS+ +LAGL +L L NQ+ L F +
Sbjct: 409 LSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTANQLTHLPRQLFQGL 457
Score = 62 (26.9 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L+VL++ NQ V+ GA GL + ++ N + L +H F +
Sbjct: 337 LGQLEVLTLNDNQIHEVKVGAFFGLFNVAVMNLSGNCLRSLPEHVFQGL 385
Score = 57 (25.1 bits), Expect = 4.2e-18, Sum P(2) = 4.2e-18
Identities = 18/74 (24%), Positives = 37/74 (50%)
Query: 621 QEDDINRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQ 680
Q + + N++ VK+ A L + + V++++ N S+ GL +L SL H+
Sbjct: 339 QLEVLTLNDNQIHEVKVGAFFGLFN-VAVMNLSGNCLRSLPEHVFQGLGRLHSLHLEHSC 397
Query: 681 IDVLEDHSFSNVIG 694
+ + H+F+ + G
Sbjct: 398 LGRIRLHTFAGLSG 411
Score = 55 (24.4 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
+ +L+ L ++HN+ + + GL L L HN I L +F ++
Sbjct: 265 MKALRWLDLSHNRVAGLLEDTFPGLLGLHVLRLAHNAITSLRPRTFKDL 313
Score = 54 (24.1 bits), Expect = 8.8e-23, Sum P(2) = 8.8e-23
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLED 686
LS L L + NQ + + R GL +L L +NQ+ +L +
Sbjct: 433 LSELLELDLTANQLTHLPRQLFQGLGQLEYLLLSNNQLTMLSE 475
Score = 54 (24.1 bits), Expect = 8.8e-23, Sum P(2) = 8.8e-23
Identities = 14/49 (28%), Positives = 21/49 (42%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L L + H+ +R AGL L L N I +E+ S + +
Sbjct: 385 LGRLHSLHLEHSCLGRIRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGL 433
Score = 53 (23.7 bits), Expect = 2.1e-24, Sum P(2) = 2.1e-24
Identities = 12/49 (24%), Positives = 25/49 (51%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L+ L +++NQ + + L L + L HN+++ + FS++
Sbjct: 457 LGQLEYLLLSNNQLTMLSEDVLGPLQRAFWLDLSHNRLETPAEGLFSSL 505
Score = 51 (23.0 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
L L+ L + HN+ + GL +L L+ + NQI ++ +F
Sbjct: 313 LHFLEELQLGHNRIRQLGEKTFEGLGQLEVLTLNDNQIHEVKVGAF 358
Score = 45 (20.9 bits), Expect = 1.4e-23, Sum P(2) = 1.4e-23
Identities = 8/32 (25%), Positives = 17/32 (53%)
Query: 650 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
L ++HN+ + G + L +L L+ +N +
Sbjct: 487 LDLSHNRLETPAEGLFSSLGRLRYLNLRNNSL 518
>UNIPROTKB|Q8TF66 [details] [associations]
symbol:LRRC15 "Leucine-rich repeat-containing protein 15"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
GO:GO:0016021 EMBL:CH471052 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 EMBL:AC125362
EMBL:AC174158 EMBL:AB071037 EMBL:BC101064 EMBL:BC101065
EMBL:BK001325 IPI:IPI00152871 IPI:IPI00913924 RefSeq:NP_001128529.2
RefSeq:NP_570843.2 UniGene:Hs.288467 ProteinModelPortal:Q8TF66
SMR:Q8TF66 IntAct:Q8TF66 STRING:Q8TF66 PhosphoSite:Q8TF66
DMDM:30794642 PaxDb:Q8TF66 PeptideAtlas:Q8TF66 PRIDE:Q8TF66
Ensembl:ENST00000347624 Ensembl:ENST00000428839
Ensembl:ENST00000439944 GeneID:131578 KEGG:hsa:131578
UCSC:uc003ftt.3 UCSC:uc003ftu.3 CTD:131578 GeneCards:GC03M194075
H-InvDB:HIX0003982 HGNC:HGNC:20818 HPA:HPA035503 neXtProt:NX_Q8TF66
PharmGKB:PA134956867 HOGENOM:HOG000040004 HOVERGEN:HBG052343
InParanoid:Q8TF66 OMA:NHLEYIP OrthoDB:EOG4QVCCN ChiTaRS:LRRC15
GenomeRNAi:131578 NextBio:82942 Bgee:Q8TF66 CleanEx:HS_LRRC15
Genevestigator:Q8TF66 GermOnline:ENSG00000172061 Uniprot:Q8TF66
Length = 581
Score = 268 (99.4 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 87/299 (29%), Positives = 139/299 (46%)
Query: 96 RVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLL 155
R S ++CT + + +P L I + + +++ F+ +S+ L AL + N L
Sbjct: 33 RASQVECTGARIVAVPTPLPWNAM--SLQILNTHITELNESPFLNISA-LIALRIEKNEL 89
Query: 156 SVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPL 215
S + A L +L L L++N+L L F+GL SL L LS N+L+ + +
Sbjct: 90 SRITPGAFRNLG-SLRYLSLANNKLQVLPIGLFQGLDSLESLLLSSNQLLQIQPAHFSQC 148
Query: 216 VTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHN 275
L+ L+L GN L A L +T L+L N L + P L +L+VL + N
Sbjct: 149 SNLKELQLHGNHLEYIPDGAFDHLVGLTKLNLGKNSLTH-ISPRVFQHLGNLQVLRLYEN 207
Query: 276 QFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAH 335
+ + + G GL L L+ NQI +L F L L L++N I + +
Sbjct: 208 RLTDIPMGTFDGLVNLQELALQQNQIGLLSPGLFHNNHNLQRLYLSNNHISQLPPSVFMQ 267
Query: 336 LSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELIYS 394
L L L L N L+ L+ + P+ +L+EL L DN IS P+ ++ + + LI S
Sbjct: 268 LPQLNRLTLFGNSLKELSPGIFGPMPNLRELWLYDNHISSLPDNVFSNLRQLQV-LILS 325
Score = 237 (88.5 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 83/268 (30%), Positives = 122/268 (45%)
Query: 105 SNVTVLP-GKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSAL 163
+++ +P G F V L L + L +IS F L + LQ L L N L+ +P
Sbjct: 159 NHLEYIPDGAFDHLVGLTKLNLGKNSLTHISPRVFQHLGN-LQVLRLYENRLTDIPMGTF 217
Query: 164 APLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRL 223
L NL L L NQ+ L F +L L LS N + L L L L L
Sbjct: 218 DGLV-NLQELALQQNQIGLLSPGLFHNNHNLQRLYLSNNHISQLPPSVFMQLPQLNRLTL 276
Query: 224 QGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRG 283
GN L + ++ +L L N ++ L + L L+VL ++ NQ S + G
Sbjct: 277 FGNSLKELSPGIFGPMPNLRELWLYDNHISS-LPDNVFSNLRQLQVLILSRNQISFISPG 335
Query: 284 ALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLD 343
A GL +L LS H N + L+ + FR L+ L ++ L +NR+ + G A+++ L +
Sbjct: 336 AFNGLTELRELSLHTNALQDLDGNVFRMLANLQNISLQNNRLRQLPGNIFANVNGLMAIQ 395
Query: 344 LSHNFLRALTQDLITPLKSLQELRLDDN 371
L +N L L + L L ELRL DN
Sbjct: 396 LQNNQLENLPLGIFDHLGKLCELRLYDN 423
Score = 235 (87.8 bits), Expect = 9.6e-16, Sum P(2) = 9.6e-16
Identities = 86/298 (28%), Positives = 136/298 (45%)
Query: 98 SLLDCTLSN--VTVLPGKFLEGV-TLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNL 154
SL +L+N + VLP +G+ +L L++SS +L I F S+ L+ L L N
Sbjct: 102 SLRYLSLANNKLQVLPIGLFQGLDSLESLLLSSNQLLQIQPAHFSQCSN-LKELQLHGNH 160
Query: 155 LSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAP 214
L +P A L L +L+L N L + F+ L +L L L N+L +
Sbjct: 161 LEYIPDGAFDHLV-GLTKLNLGKNSLTHISPRVFQHLGNLQVLRLYENRLTDIPMGTFDG 219
Query: 215 LVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAH 274
LV L+ L LQ N++ + ++ L LS+N ++ L PS +L L L++
Sbjct: 220 LVNLQELALQQNQIGLLSPGLFHNNHNLQRLYLSNNHIS-QLPPSVFMQLPQLNRLTLFG 278
Query: 275 NQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLA 334
N + G + L L + N I L D+ F L L L L+ N+I +S +
Sbjct: 279 NSLKELSPGIFGPMPNLRELWLYDNHISSLPDNVFSNLRQLQVLILSRNQISFISPGAFN 338
Query: 335 HLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFN-TMDLEL 391
L+ L L L N L+ L ++ L +LQ + L +N + P I+ N M ++L
Sbjct: 339 GLTELRELSLHTNALQDLDGNVFRMLANLQNISLQNNRLRQLPGNIFANVNGLMAIQL 396
Score = 78 (32.5 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 18/46 (39%), Positives = 26/46 (56%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
L L+VL ++ NQ S + GA GL +L LS H N + L+ + F
Sbjct: 316 LRQLQVLILSRNQISFISPGAFNGLTELRELSLHTNALQDLDGNVF 361
Score = 51 (23.0 bits), Expect = 9.9e-21, Sum P(2) = 9.9e-21
Identities = 14/51 (27%), Positives = 25/51 (49%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNVIG 694
L+ L+ LS+ N + L L ++S +N++ L + F+NV G
Sbjct: 340 LTELRELSLHTNALQDLDGNVFRMLANLQNISLQNNRLRQLPGNIFANVNG 390
Score = 46 (21.3 bits), Expect = 3.3e-20, Sum P(2) = 3.3e-20
Identities = 9/42 (21%), Positives = 25/42 (59%)
Query: 643 LLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL 684
+L++L+ +S+ +N+ + A ++ L ++ +NQ++ L
Sbjct: 363 MLANLQNISLQNNRLRQLPGNIFANVNGLMAIQLQNNQLENL 404
Score = 39 (18.8 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 9/36 (25%), Positives = 17/36 (47%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 679
++ L + + +NQ ++ G L KL L + N
Sbjct: 388 VNGLMAIQLQNNQLENLPLGIFDHLGKLCELRLYDN 423
>FB|FBgn0033250 [details] [associations]
symbol:CG14762 species:7227 "Drosophila melanogaster"
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
InterPro:IPR001611 PROSITE:PS51450 EMBL:AE013599 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GeneTree:ENSGT00700000104056
EMBL:AY060601 RefSeq:NP_610346.1 UniGene:Dm.3950 SMR:Q7K2X5
EnsemblMetazoa:FBtr0088867 GeneID:35768 KEGG:dme:Dmel_CG14762
UCSC:CG14762-RA FlyBase:FBgn0033250 InParanoid:Q7K2X5
OrthoDB:EOG4N8PM4 GenomeRNAi:35768 NextBio:795128 Uniprot:Q7K2X5
Length = 470
Score = 293 (108.2 bits), Expect = 3.1e-23, P = 3.1e-23
Identities = 93/330 (28%), Positives = 152/330 (46%)
Query: 64 CACDLPHT-LRCTANKSDLYAISESLRGLEPDERVSL-LDCTLSNVTVLPGKFLEGVTLH 121
C C + L +DL I++S+ L+ + L +N+ L G + +
Sbjct: 48 CICTVKKNGLDILCETTDLAHITKSMGTLKGKSPIIFYLKLRHNNLPKLQGFVFLALDIR 107
Query: 122 GLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLY 181
L I + L I + A L + L L + N + VP+ AL L +L L+L+HN++
Sbjct: 108 HLTIHNSSLAAIEENALSSLGAGLTQLDVSLNQMKTVPSQALQHLF-HLLILNLNHNKIT 166
Query: 182 KLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVT-LRVLRLQGNRLTVSVVAALQGLR 240
+ N +F+GL +L L L NK+ + + L ++ L L GN LT AL L
Sbjct: 167 VIHNNAFEGLETLEILTLYENKITQIDPEAFRGLEDHIKRLNLGGNDLTNIPQKALSILS 226
Query: 241 SVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQ 300
++ L++ N + + L SL L +AHN ++V + L L SL N+
Sbjct: 227 TLKKLEIQENKIR-TISEGDFEGLQSLDSLILAHNMITTVPANVFSHLTLLNSLELEGNK 285
Query: 301 IDVLEDHSFRALS-TLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITP 359
I V++ +F+ L L +L L N+I + +L L L LDL +N + L +D T
Sbjct: 286 ISVIDKDAFKGLEENLQYLRLGDNQIHTIPSEALRPLHRLRHLDLRNNNINVLAEDAFTG 345
Query: 360 L-KSLQELRLDDNDISMEPECIYVGFNTMD 388
SL L L NDI + P ++ N+++
Sbjct: 346 FGDSLTFLNLQKNDIKVLPSLLFENLNSLE 375
Score = 266 (98.7 bits), Expect = 4.0e-20, P = 4.0e-20
Identities = 76/273 (27%), Positives = 136/273 (49%)
Query: 138 FIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFL 197
F+ L+ ++ L + N+ L+ + +AL+ L L +LD+S NQ+ + + + + L L L
Sbjct: 99 FVFLALDIRHLTIHNSSLAAIEENALSSLGAGLTQLDVSLNQMKTVPSQALQHLFHLLIL 158
Query: 198 DLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRS-VTDLDLSHNLLAGPL 256
+L++NK+ + + L TL +L L N++T A +GL + L+L N L +
Sbjct: 159 NLNHNKITVIHNNAFEGLETLEILTLYENKITQIDPEAFRGLEDHIKRLNLGGNDLTN-I 217
Query: 257 GPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLS 316
+ LS+LK L I N+ ++ G GL L SL HN I + + F L+ L+
Sbjct: 218 PQKALSILSTLKKLEIQENKIRTISEGDFEGLQSLDSLILAHNMITTVPANVFSHLTLLN 277
Query: 317 HLDLAHNRIVAVSGASLAHLS-NLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISM 375
L+L N+I + + L NL L L N + + + + PL L+ L L +N+I++
Sbjct: 278 SLELEGNKISVIDKDAFKGLEENLQYLRLGDNQIHTIPSEALRPLHRLRHLDLRNNNINV 337
Query: 376 EPECIYVGFNTMDLELIYSGVWRHSTLLIPVML 408
E + GF L + + ++ ++P +L
Sbjct: 338 LAEDAFTGFGD---SLTFLNLQKNDIKVLPSLL 367
Score = 247 (92.0 bits), Expect = 5.6e-18, P = 5.6e-18
Identities = 86/320 (26%), Positives = 157/320 (49%)
Query: 65 ACDLPHTLRCTANKSDLYAISES-LRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGL 123
A D+ H T + S L AI E+ L L ++ LD +L+ + +P + L+ + H L
Sbjct: 103 ALDIRHL---TIHNSSLAAIEENALSSLGAG--LTQLDVSLNQMKTVPSQALQHL-FHLL 156
Query: 124 VIS--SGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLY 181
+++ ++ I + AF GL + L+ L L N ++ + A L ++ RL+L N L
Sbjct: 157 ILNLNHNKITVIHNNAFEGLET-LEILTLYENKITQIDPEAFRGLEDHIKRLNLGGNDLT 215
Query: 182 KLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRS 241
+ + LS+L L++ NK+ T+S+ L +L L L N +T L
Sbjct: 216 NIPQKALSILSTLKKLEIQENKIRTISEGDFEGLQSLDSLILAHNMITTVPANVFSHLTL 275
Query: 242 VTDLDLSHNLLAGPLGPSTVPRLS-SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQ 300
+ L+L N ++ + L +L+ L + NQ ++ AL L +L L +N
Sbjct: 276 LNSLELEGNKIS-VIDKDAFKGLEENLQYLRLGDNQIHTIPSEALRPLHRLRHLDLRNNN 334
Query: 301 IDVLEDHSFRALS-TLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITP 359
I+VL + +F +L+ L+L N I + +L++L TL+L +N L+ + QD++ P
Sbjct: 335 INVLAEDAFTGFGDSLTFLNLQKNDIKVLPSLLFENLNSLETLNLQNNKLQRIPQDIMEP 394
Query: 360 -LKSLQELRLDDNDISMEPE 378
+ +L+ + + DN ++ E
Sbjct: 395 VIDTLRIIDITDNPLNCSCE 414
>UNIPROTKB|Q1KS52 [details] [associations]
symbol:ALS "Acid-labile subunit" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005634 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 CTD:3483
HOVERGEN:HBG000327 OrthoDB:EOG4FFD1R InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GeneTree:ENSGT00690000101816
HOGENOM:HOG000116109 OMA:FCGLGEL EMBL:CU929968 EMBL:DQ459343
EMBL:DQ459344 RefSeq:NP_001041651.1 UniGene:Ssc.16015 STRING:Q1KS52
Ensembl:ENSSSCT00000008781 GeneID:397322 KEGG:ssc:397322
Uniprot:Q1KS52
Length = 606
Score = 289 (106.8 bits), Expect = 3.9e-23, Sum P(2) = 3.9e-23
Identities = 91/298 (30%), Positives = 139/298 (46%)
Query: 98 SLLDCTL--SNVTVLPGKFLEGVT-LHGLVISSGELKNISDGAFIGLSSPLQALGLPNNL 154
+L D L +++ VLP G+ L LV++ +L + F GL L+ L L N
Sbjct: 171 NLWDLNLGWNSLAVLPDTAFHGLANLRELVLAGNKLTYLQPALFCGLGE-LRELDLSRNA 229
Query: 155 LSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAP 214
L V + L P L +L L HN L + +F G+ +L +LDLS+N++ L +D
Sbjct: 230 LRSVKANVFVKL-PKLQKLYLDHNLLAAVAPGAFLGMKALRWLDLSHNRVGGLLEDTFPG 288
Query: 215 LVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAH 274
L+ L VLRL N L + L + +L L HN L L L L+VL++
Sbjct: 289 LLGLHVLRLAHNALASLRPRTFKDLHFLEELQLGHNRLR-QLPEKAFEGLGQLEVLALND 347
Query: 275 NQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLA 334
NQ ++ GA GL + ++ N + L + FR L L L L H+ + V + A
Sbjct: 348 NQIQEIKAGAFLGLFNVAVMNLSGNCLRNLPEQVFRGLGKLHSLHLEHSCLGRVGLHTFA 407
Query: 335 HLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELI 392
LS L L L N L A+ + + L L EL L N ++ P ++ G ++ L+
Sbjct: 408 GLSGLRRLFLKDNGLEAIDEQSLWGLAELLELDLTANRLTHLPGRLFQGLGKLEYLLL 465
Score = 275 (101.9 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
Identities = 89/308 (28%), Positives = 141/308 (45%)
Query: 66 CDLPHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVI 125
C L +++ L ++ ++ P + LD L V PG FL L L +
Sbjct: 215 CGLGELRELDLSRNALRSVKANVFVKLPKLQKLYLDHNLL-AAVAPGAFLGMKALRWLDL 273
Query: 126 SSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLEN 185
S + + + F GL L L L +N L+ + L L+ L L HN+L +L
Sbjct: 274 SHNRVGGLLEDTFPGLLG-LHVLRLAHNALASLRPRTFKDLH-FLEELQLGHNRLRQLPE 331
Query: 186 TSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDL 245
+F+GL L L L+ N++ + L + V+ L GN L +GL + L
Sbjct: 332 KAFEGLGQLEVLALNDNQIQEIKAGAFLGLFNVAVMNLSGNCLRNLPEQVFRGLGKLHSL 391
Query: 246 DLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLE 305
L H+ L G +G T LS L+ L + N ++ +L GL +L L N++ L
Sbjct: 392 HLEHSCL-GRVGLHTFAGLSGLRRLFLKDNGLEAIDEQSLWGLAELLELDLTANRLTHLP 450
Query: 306 DHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQE 365
F+ L L +L L+ NR+ A+ +L L LD+SHN L+AL + ++ PL L+
Sbjct: 451 GRLFQGLGKLEYLLLSRNRLSALPADALGPLQRTFWLDVSHNRLQALPEAVLAPLGQLRY 510
Query: 366 LRLDDNDI 373
L L +N +
Sbjct: 511 LSLRNNSL 518
Score = 253 (94.1 bits), Expect = 9.1e-20, Sum P(2) = 9.1e-20
Identities = 87/288 (30%), Positives = 125/288 (43%)
Query: 102 CTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTS 161
C+ N+T LP + L + S ++ GAF LSS L L L + L+ +
Sbjct: 60 CSSRNLTQLPDGIPDAA--RALWLDSNNFSSVPAGAFRNLSS-LGFLNLQGSGLASLEPQ 116
Query: 162 ALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVL 221
AL L NL L L NQL L +F L L L N L + + L L L
Sbjct: 117 ALLGLQ-NLYHLHLERNQLRSLAAHTFLHTPGLASLGLHNNLLSRVEEGLFQGLTNLWDL 175
Query: 222 RLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVR 281
L N L V A GL ++ +L L+ N L L P+ L L+ L ++ N SV+
Sbjct: 176 NLGWNSLAVLPDTAFHGLANLRELVLAGNKLTY-LQPALFCGLGELRELDLSRNALRSVK 234
Query: 282 RGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTT 341
L KL L HN + + +F + L LDL+HNR+ + + L L
Sbjct: 235 ANVFVKLPKLQKLYLDHNLLAAVAPGAFLGMKALRWLDLSHNRVGGLLEDTFPGLLGLHV 294
Query: 342 LDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDL 389
L L+HN L +L L L+EL+L N + PE + G +++
Sbjct: 295 LRLAHNALASLRPRTFKDLHFLEELQLGHNRLRQLPEKAFEGLGQLEV 342
Score = 238 (88.8 bits), Expect = 3.8e-17, Sum P(2) = 3.8e-17
Identities = 95/321 (29%), Positives = 138/321 (42%)
Query: 68 LPHT-LRCTANKSDLYAISESLRGLEPDERVSL-----LDCTLSNV-TVLPGKFLEGVTL 120
LP T AN +L L L+P L LD + + + +V F++ L
Sbjct: 185 LPDTAFHGLANLRELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVKANVFVKLPKL 244
Query: 121 HGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQL 180
L + L ++ GAF+G+ + L+ L L +N + + L L L L+HN L
Sbjct: 245 QKLYLDHNLLAAVAPGAFLGMKA-LRWLDLSHNRVGGLLEDTFPGLL-GLHVLRLAHNAL 302
Query: 181 YKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLR 240
L +FK L L L L +N+L L + L L VL L N++ A GL
Sbjct: 303 ASLRPRTFKDLHFLEELQLGHNRLRQLPEKAFEGLGQLEVLALNDNQIQEIKAGAFLGLF 362
Query: 241 SVTDLDLSHNLLAGPLGPSTVPR-LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 299
+V ++LS N L P V R L L L + H+ V AGL L L N
Sbjct: 363 NVAVMNLSGNCLRNL--PEQVFRGLGKLHSLHLEHSCLGRVGLHTFAGLSGLRRLFLKDN 420
Query: 300 QIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITP 359
++ +++ S L+ L LDL NR+ + G L L L LS N L AL D + P
Sbjct: 421 GLEAIDEQSLWGLAELLELDLTANRLTHLPGRLFQGLGKLEYLLLSRNRLSALPADALGP 480
Query: 360 LKSLQELRLDDNDISMEPECI 380
L+ L + N + PE +
Sbjct: 481 LQRTFWLDVSHNRLQALPEAV 501
Score = 192 (72.6 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 61/199 (30%), Positives = 90/199 (45%)
Query: 199 LSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGP 258
L N ++ L +L L LQG+ L AL GL+++ L L N L L
Sbjct: 81 LDSNNFSSVPAGAFRNLSSLGFLNLQGSGLASLEPQALLGLQNLYHLHLERNQLRS-LAA 139
Query: 259 STVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHL 318
T L L + +N S V G GL L L+ N + VL D +F L+ L L
Sbjct: 140 HTFLHTPGLASLGLHNNLLSRVEEGLFQGLTNLWDLNLGWNSLAVLPDTAFHGLANLREL 199
Query: 319 DLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPE 378
LA N++ + A L L LDLS N LR++ ++ L LQ+L LD N ++
Sbjct: 200 VLAGNKLTYLQPALFCGLGELRELDLSRNALRSVKANVFVKLPKLQKLYLDHNLLAAVAP 259
Query: 379 CIYVGFNTMD-LELIYSGV 396
++G + L+L ++ V
Sbjct: 260 GAFLGMKALRWLDLSHNRV 278
Score = 181 (68.8 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 75/255 (29%), Positives = 116/255 (45%)
Query: 120 LHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQ 179
LH L ++ L ++ F L L+ L L +N L +P A L L+ L L+ NQ
Sbjct: 292 LHVLRLAHNALASLRPRTFKDLHF-LEELQLGHNRLRQLPEKAFEGLG-QLEVLALNDNQ 349
Query: 180 LYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGN---RLTVSVVAAL 236
+ +++ +F GL ++ ++LS N L L + L L L L+ + R+ + A L
Sbjct: 350 IQEIKAGAFLGLFNVAVMNLSGNCLRNLPEQVFRGLGKLHSLHLEHSCLGRVGLHTFAGL 409
Query: 237 QGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSC 296
GLR L L N L + ++ L+ L L + N+ + + GL KL L
Sbjct: 410 SGLRR---LFLKDNGLEA-IDEQSLWGLAELLELDLTANRLTHLPGRLFQGLGKLEYLLL 465
Query: 297 HHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDL 356
N++ L + L LD++HNR+ A+ A LA L L L L +N LR
Sbjct: 466 SRNRLSALPADALGPLQRTFWLDVSHNRLQALPEAVLAPLGQLRYLSLRNNSLRTFVPQ- 524
Query: 357 ITPLKSLQELRLDDN 371
PL L+ L L+ N
Sbjct: 525 --PL-GLERLWLEGN 536
Score = 65 (27.9 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L VL +AHN +S+R L L L HN++ L + +F +
Sbjct: 289 LLGLHVLRLAHNALASLRPRTFKDLHFLEELQLGHNRLRQLPEKAFEGL 337
Score = 59 (25.8 bits), Expect = 9.1e-20, Sum P(2) = 9.1e-20
Identities = 16/66 (24%), Positives = 36/66 (54%)
Query: 630 SDSRYVKLQATTIL-LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHS 688
+D++ +++A L L ++ V++++ N ++ GL KL SL H+ + + H+
Sbjct: 346 NDNQIQEIKAGAFLGLFNVAVMNLSGNCLRNLPEQVFRGLGKLHSLHLEHSCLGRVGLHT 405
Query: 689 FSNVIG 694
F+ + G
Sbjct: 406 FAGLSG 411
Score = 58 (25.5 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 14/46 (30%), Positives = 24/46 (52%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
L L+ L + HN+ + A GL +L L+ + NQI ++ +F
Sbjct: 313 LHFLEELQLGHNRLRQLPEKAFEGLGQLEVLALNDNQIQEIKAGAF 358
Score = 55 (24.4 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
L L+VL++ NQ ++ GA GL + ++ N + L + F
Sbjct: 337 LGQLEVLALNDNQIQEIKAGAFLGLFNVAVMNLSGNCLRNLPEQVF 382
Score = 52 (23.4 bits), Expect = 3.9e-23, Sum P(2) = 3.9e-23
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLED 686
L L+ L ++ N+ S++ AL L + L HN++ L +
Sbjct: 457 LGKLEYLLLSRNRLSALPADALGPLQRTFWLDVSHNRLQALPE 499
Score = 51 (23.0 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 12/49 (24%), Positives = 23/49 (46%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
+ +L+ L ++HN+ + GL L L HN + L +F ++
Sbjct: 265 MKALRWLDLSHNRVGGLLEDTFPGLLGLHVLRLAHNALASLRPRTFKDL 313
Score = 50 (22.7 bits), Expect = 6.3e-23, Sum P(2) = 6.3e-23
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 650 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
L ++HN+ ++ LA L +L LS +N +
Sbjct: 487 LDVSHNRLQALPEAVLAPLGQLRYLSLRNNSL 518
Score = 43 (20.2 bits), Expect = 4.2e-18, Sum P(2) = 4.2e-18
Identities = 12/45 (26%), Positives = 19/45 (42%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHS 688
L L L + H+ V AGL L L N ++ +++ S
Sbjct: 385 LGKLHSLHLEHSCLGRVGLHTFAGLSGLRRLFLKDNGLEAIDEQS 429
>UNIPROTKB|F1NI07 [details] [associations]
symbol:IGFALS "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005634 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GeneTree:ENSGT00690000101816 OMA:FCGLGEL
EMBL:AADN02049426 IPI:IPI00576764 Ensembl:ENSGALT00000003657
Uniprot:F1NI07
Length = 604
Score = 294 (108.6 bits), Expect = 6.9e-23, P = 6.9e-23
Identities = 104/377 (27%), Positives = 173/377 (45%)
Query: 68 LPHTLRCTANK-SDLYAISESLRGLEPDERVSLLDCT---LSNV---TVLPGKFLEGVTL 120
L H L C+ + +L +L+G++ + V L L+N + P F+ +L
Sbjct: 204 LQHQLFCSLTELKELDLSGNALKGIKINIFVKLQKLQKLYLNNNQINAIAPRAFMGMKSL 263
Query: 121 HGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQL 180
L +S L ++ + F+GL S L L L N ++ + L L+ L L HN++
Sbjct: 264 RWLDLSHNRLTSLYEDTFLGLLS-LHVLRLSTNSITSLRPRTFKDLQ-FLEELQLGHNRI 321
Query: 181 YKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLR 240
+ L +F GL L L L+ N+L + L + V+ L N + +G+
Sbjct: 322 WSLAERTFDGLGQLEVLSLNNNQLQDIKAGAFLGLYNVAVMHLSANCIKTLPEYVFEGVT 381
Query: 241 SVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQ 300
+ L L H+ L+ + +T L+SL+ L + HN S++ + L +L L HN+
Sbjct: 382 KLHSLHLEHSCLS-KIRANTFSSLTSLRRLFLQHNAISTIEDQSFRELHELLELDLKHNR 440
Query: 301 IDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPL 360
+ L F LS L +L L+ N+I+ +S + + L L LDLSHN L L +IT L
Sbjct: 441 LSHLSPQLFVGLSNLEYLFLSFNQIMDISQNTFSPLRRLFWLDLSHNQLATLDNAVITQL 500
Query: 361 KSLQELRLDDNDISMEPECIYVGF--NTMDLELIYSGV--WRHSTLLIPVMLSLCTRS-S 415
+L+ L L +N + E VGF + LE ++ G W H + + R +
Sbjct: 501 ANLRYLSLRNNSL----ETFSVGFLCPSFTLEQLWLGGNNW-HCNCSLKGLRDFALRHPT 555
Query: 416 VVTRYRYCVVLIEGSNI 432
VV R+ V + S++
Sbjct: 556 VVPRFVQSVAEGDDSHV 572
Score = 254 (94.5 bits), Expect = 3.8e-21, Sum P(2) = 3.8e-21
Identities = 92/314 (29%), Positives = 144/314 (45%)
Query: 64 CACDLPHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTL--SNVTVLPGKFLEGVT-L 120
CAC L + + +++ +L L D + L +N T LP ++ L
Sbjct: 40 CACSLDDY----SEELNVFCSGRNLTQLPDDFPTNAKAIWLDGNNFTQLPAAAFRNLSGL 95
Query: 121 HGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLS-VVPTSALAPLAPNLDRLDLSHNQ 179
L + S +L + AF GL S L L L N L + P + L NL L L++N
Sbjct: 96 DFLDLQSSQLAAVEQHAFHGLRS-LYHLHLERNRLKYLAPHTFLH--TQNLVSLSLNNNL 152
Query: 180 LYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGL 239
K+E F GLS+L +L+L +N L+ L L LR L L GN+L L
Sbjct: 153 FSKVEEGLFAGLSNLWYLNLGWNSLVVLPDKVFHDLPNLRELILAGNKLPYLQHQLFCSL 212
Query: 240 RSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 299
+ +LDLS N L G + + +L L+ L + +NQ +++ A G+ L L HN
Sbjct: 213 TELKELDLSGNALKG-IKINIFVKLQKLQKLYLNNNQINAIAPRAFMGMKSLRWLDLSHN 271
Query: 300 QIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITP 359
++ L + +F L +L L L+ N I ++ + L L L L HN + +L +
Sbjct: 272 RLTSLYEDTFLGLLSLHVLRLSTNSITSLRPRTFKDLQFLEELQLGHNRIWSLAERTFDG 331
Query: 360 LKSLQELRLDDNDI 373
L L+ L L++N +
Sbjct: 332 LGQLEVLSLNNNQL 345
Score = 197 (74.4 bits), Expect = 9.0e-15, Sum P(2) = 9.0e-15
Identities = 87/309 (28%), Positives = 136/309 (44%)
Query: 199 LSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGP 258
L N L L L L LQ ++L A GLRS+ L L N L L P
Sbjct: 76 LDGNNFTQLPAAAFRNLSGLDFLDLQSSQLAAVEQHAFHGLRSLYHLHLERNRLKY-LAP 134
Query: 259 STVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHL 318
T +L LS+ +N FS V G AGL L L+ N + VL D F L L L
Sbjct: 135 HTFLHTQNLVSLSLNNNLFSKVEEGLFAGLSNLWYLNLGWNSLVVLPDKVFHDLPNLREL 194
Query: 319 DLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPE 378
LA N++ + L+ L LDLS N L+ + ++ L+ LQ+L L++N I+
Sbjct: 195 ILAGNKLPYLQHQLFCSLTELKELDLSGNALKGIKINIFVKLQKLQKLYLNNNQINAIAP 254
Query: 379 CIYVGFNTMD-LELIYS---GVWRHSTL-LIPV-MLSLCTRSSVVTRYRYCVVLIEGSNI 432
++G ++ L+L ++ ++ + L L+ + +L L T S R R +
Sbjct: 255 RAFMGMKSLRWLDLSHNRLTSLYEDTFLGLLSLHVLRLSTNSITSLRPR----TFKDLQF 310
Query: 433 LDQSALVLGCSEILALVPTLTSQPLSYVTSLRANVTGLGTVQV--YVQLWT----NYDPN 486
L++ L LG + I +L T L + L N L ++ ++ L+ + N
Sbjct: 311 LEE--LQLGHNRIWSLAER-TFDGLGQLEVLSLNNNQLQDIKAGAFLGLYNVAVMHLSAN 367
Query: 487 CLLTITLYI 495
C+ T+ Y+
Sbjct: 368 CIKTLPEYV 376
Score = 140 (54.3 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 37/138 (26%), Positives = 65/138 (47%)
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 317
P P ++ K + + N F+ + A L L L +Q+ +E H+F L +L H
Sbjct: 64 PDDFP--TNAKAIWLDGNNFTQLPAAAFRNLSGLDFLDLQSSQLAAVEQHAFHGLRSLYH 121
Query: 318 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEP 377
L L NR+ ++ + H NL +L L++N + + L L +L L L N + + P
Sbjct: 122 LHLERNRLKYLAPHTFLHTQNLVSLSLNNNLFSKVEEGLFAGLSNLWYLNLGWNSLVVLP 181
Query: 378 ECIYVGFNTMDLELIYSG 395
+ ++ + ELI +G
Sbjct: 182 DKVFHDLPNLR-ELILAG 198
Score = 71 (30.1 bits), Expect = 3.8e-21, Sum P(2) = 3.8e-21
Identities = 15/46 (32%), Positives = 22/46 (47%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
++ L L + H+ S +R + L L L HN I +ED SF
Sbjct: 380 VTKLHSLHLEHSCLSKIRANTFSSLTSLRRLFLQHNAISTIEDQSF 425
Score = 70 (29.7 bits), Expect = 4.9e-21, Sum P(2) = 4.9e-21
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L+VLS+ +NQ ++ GA GL + + N I L ++ F V
Sbjct: 332 LGQLEVLSLNNNQLQDIKAGAFLGLYNVAVMHLSANCIKTLPEYVFEGV 380
Score = 68 (29.0 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 21/64 (32%), Positives = 30/64 (46%)
Query: 630 SDSRYVKLQATTIL-LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHS 688
S +R L T L L SL VL ++ N +S+R L L L HN+I L + +
Sbjct: 269 SHNRLTSLYEDTFLGLLSLHVLRLSTNSITSLRPRTFKDLQFLEELQLGHNRIWSLAERT 328
Query: 689 FSNV 692
F +
Sbjct: 329 FDGL 332
Score = 66 (28.3 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 636 KLQATTIL-LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
K++A T L+SL+ L + HN S++ + L +L L HN++ L F
Sbjct: 395 KIRANTFSSLTSLRRLFLQHNAISTIEDQSFRELHELLELDLKHNRLSHLSPQLF 449
Score = 60 (26.2 bits), Expect = 5.4e-20, Sum P(2) = 5.4e-20
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLED 686
LS+L+ L ++ NQ + + + L +L L HNQ+ L++
Sbjct: 452 LSNLEYLFLSFNQIMDISQNTFSPLRRLFWLDLSHNQLATLDN 494
Score = 60 (26.2 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 16/82 (19%), Positives = 41/82 (50%)
Query: 612 HACFIPVAQQEDDINRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKL 671
H F + + ++ ++ + + + +K+ + L L+ L + +NQ +++ A G+ L
Sbjct: 206 HQLFCSLTELKE-LDLSGNALKGIKINIF-VKLQKLQKLYLNNNQINAIAPRAFMGMKSL 263
Query: 672 TSLSCHHNQIDVLEDHSFSNVI 693
L HN++ L + +F ++
Sbjct: 264 RWLDLSHNRLTSLYEDTFLGLL 285
Score = 59 (25.8 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 14/46 (30%), Positives = 25/46 (54%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
L L+ L + HN+ S+ GL +L LS ++NQ+ ++ +F
Sbjct: 308 LQFLEELQLGHNRIWSLAERTFDGLGQLEVLSLNNNQLQDIKAGAF 353
Score = 57 (25.1 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 14/49 (28%), Positives = 24/49 (48%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
+ SL+ L ++HN+ +S+ GL L L N I L +F ++
Sbjct: 260 MKSLRWLDLSHNRLTSLYEDTFLGLLSLHVLRLSTNSITSLRPRTFKDL 308
Score = 54 (24.1 bits), Expect = 2.3e-19, Sum P(2) = 2.3e-19
Identities = 15/47 (31%), Positives = 21/47 (44%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFS 690
L L L + HN+ S + GL L L NQI + ++FS
Sbjct: 428 LHELLELDLKHNRLSHLSPQLFVGLSNLEYLFLSFNQIMDISQNTFS 474
Score = 54 (24.1 bits), Expect = 2.3e-19, Sum P(2) = 2.3e-19
Identities = 16/72 (22%), Positives = 38/72 (52%)
Query: 621 QEDDINRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQ 680
Q + ++ NN+ + +K A + L ++ V+ ++ N ++ G+ KL SL H+
Sbjct: 334 QLEVLSLNNNQLQDIKAGAF-LGLYNVAVMHLSANCIKTLPEYVFEGVTKLHSLHLEHSC 392
Query: 681 IDVLEDHSFSNV 692
+ + ++FS++
Sbjct: 393 LSKIRANTFSSL 404
Score = 49 (22.3 bits), Expect = 7.6e-19, Sum P(2) = 7.6e-19
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 638 QATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID 682
Q T L L L ++HNQ +++ + L L LS +N ++
Sbjct: 470 QNTFSPLRRLFWLDLSHNQLATLDNAVITQLANLRYLSLRNNSLE 514
>UNIPROTKB|F1MJZ4 [details] [associations]
symbol:IGFALS "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005634 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GeneTree:ENSGT00690000101816 EMBL:DAAA02057304
IPI:IPI00807324 Ensembl:ENSBTAT00000047326 OMA:FCGLGEL
Uniprot:F1MJZ4
Length = 610
Score = 281 (104.0 bits), Expect = 1.6e-22, Sum P(2) = 1.6e-22
Identities = 97/308 (31%), Positives = 138/308 (44%)
Query: 66 CDLPHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVI 125
C L +++ L ++ ++ P + LD L V PG FL L L +
Sbjct: 219 CGLGELRELDLSRNTLRSVKANVFVKLPKLQKLYLDHNLV-AAVAPGAFLGMKALRWLDL 277
Query: 126 SSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLEN 185
S + ++ + +F GL L L L +N+L+ + L L+ L L HN+L +L
Sbjct: 278 SHNRVGSLLEDSFPGLLG-LHVLRLSHNVLAGLRPRTFKDLH-FLEELQLGHNRLRQLPE 335
Query: 186 TSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDL 245
+F GL L L L+ N+L L L L VL L N L A QGL + L
Sbjct: 336 EAFAGLGQLEVLALNDNQLQELRPGGFLGLRNLAVLNLSSNCLRDLPERAFQGLAKLHSL 395
Query: 246 DLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLE 305
L LA LGP LS L+ L + N + V +L GL +L L NQ+ L
Sbjct: 396 HLEGGCLAR-LGPLAFAGLSGLRRLFLKGNSIADVDERSLGGLAELLELDLTANQLTHLP 454
Query: 306 DHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQE 365
F+ L L +L LA NR+ A+ +L L LD+SHN L AL + PL L+
Sbjct: 455 GRLFQDLGRLEYLLLARNRLSALPADALGPLQRTFWLDVSHNRLEALPAAALAPLSRLRF 514
Query: 366 LRLDDNDI 373
L L +N +
Sbjct: 515 LSLRNNSL 522
Score = 277 (102.6 bits), Expect = 8.6e-23, Sum P(2) = 8.6e-23
Identities = 93/288 (32%), Positives = 126/288 (43%)
Query: 102 CTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTS 161
C+ N+T LPG G L + +I AF LS L L L + L+ +
Sbjct: 64 CSSRNLTQLPGGLPPGT--RALWLDGNNFSSIPAAAFRNLSG-LGFLNLQGSGLASLEPQ 120
Query: 162 ALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVL 221
AL L L L L HN+L+ L +F L L LS N L L + L L L
Sbjct: 121 ALLGLR-GLCHLHLEHNRLHALAAHTFLHTPGLASLGLSNNLLSRLDEGLFRGLAHLWDL 179
Query: 222 RLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVR 281
L N LTV A QGL + +L L+ N LA L P L L+ L ++ N SV+
Sbjct: 180 NLGWNSLTVLPDTAFQGLAGLRELVLAGNKLAY-LQPPLFCGLGELRELDLSRNTLRSVK 238
Query: 282 RGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTT 341
L KL L HN + + +F + L LDL+HNR+ ++ S L L
Sbjct: 239 ANVFVKLPKLQKLYLDHNLVAAVAPGAFLGMKALRWLDLSHNRVGSLLEDSFPGLLGLHV 298
Query: 342 LDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDL 389
L LSHN L L L L+EL+L N + PE + G +++
Sbjct: 299 LRLSHNVLAGLRPRTFKDLHFLEELQLGHNRLRQLPEEAFAGLGQLEV 346
Score = 269 (99.8 bits), Expect = 3.8e-21, Sum P(2) = 3.8e-21
Identities = 84/289 (29%), Positives = 135/289 (46%)
Query: 105 SNVTVLPGKFLEGVT-LHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSAL 163
+++TVLP +G+ L LV++ +L + F GL L+ L L N L V +
Sbjct: 184 NSLTVLPDTAFQGLAGLRELVLAGNKLAYLQPPLFCGLGE-LRELDLSRNTLRSVKANVF 242
Query: 164 APLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRL 223
L P L +L L HN + + +F G+ +L +LDLS+N++ +L +D L+ L VLRL
Sbjct: 243 VKL-PKLQKLYLDHNLVAAVAPGAFLGMKALRWLDLSHNRVGSLLEDSFPGLLGLHVLRL 301
Query: 224 QGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRG 283
N L + L + +L L HN L L L L+VL++ NQ +R G
Sbjct: 302 SHNVLAGLRPRTFKDLHFLEELQLGHNRLR-QLPEEAFAGLGQLEVLALNDNQLQELRPG 360
Query: 284 ALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLD 343
GL L L+ N + L + +F+ L+ L L L + + + A LS L L
Sbjct: 361 GFLGLRNLAVLNLSSNCLRDLPERAFQGLAKLHSLHLEGGCLARLGPLAFAGLSGLRRLF 420
Query: 344 LSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELI 392
L N + + + + L L EL L N ++ P ++ ++ L+
Sbjct: 421 LKGNSIADVDERSLGGLAELLELDLTANQLTHLPGRLFQDLGRLEYLLL 469
Score = 244 (91.0 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 81/244 (33%), Positives = 113/244 (46%)
Query: 141 LSSP-LQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDL 199
L +P L +LGL NNLLS + LA D L+L N L L +T+F+GL+ L L L
Sbjct: 147 LHTPGLASLGLSNNLLSRLDEGLFRGLAHLWD-LNLGWNSLTVLPDTAFQGLAGLRELVL 205
Query: 200 SYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPS 259
+ NKL L L LR L L N L L + L L HNL+A + P
Sbjct: 206 AGNKLAYLQPPLFCGLGELRELDLSRNTLRSVKANVFVKLPKLQKLYLDHNLVAA-VAPG 264
Query: 260 TVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 319
+ +L+ L ++HN+ S+ + GL L L HN + L +F+ L L L
Sbjct: 265 AFLGMKALRWLDLSHNRVGSLLEDSFPGLLGLHVLRLSHNVLAGLRPRTFKDLHFLEELQ 324
Query: 320 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPEC 379
L HNR+ + + A L L L L+ N L+ L L++L L L N + PE
Sbjct: 325 LGHNRLRQLPEEAFAGLGQLEVLALNDNQLQELRPGGFLGLRNLAVLNLSSNCLRDLPER 384
Query: 380 IYVG 383
+ G
Sbjct: 385 AFQG 388
Score = 230 (86.0 bits), Expect = 9.3e-17, Sum P(2) = 9.3e-17
Identities = 89/258 (34%), Positives = 116/258 (44%)
Query: 120 LHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQ 179
L L +S L+++ F+ L LQ L L +NL++ V A + L LDLSHN+
Sbjct: 224 LRELDLSRNTLRSVKANVFVKLPK-LQKLYLDHNLVAAVAPGAFLGMKA-LRWLDLSHNR 281
Query: 180 LYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGL 239
+ L SF GL L+ L LS+N L L L L L+L NRL A GL
Sbjct: 282 VGSLLEDSFPGLLGLHVLRLSHNVLAGLRPRTFKDLHFLEELQLGHNRLRQLPEEAFAGL 341
Query: 240 RSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 299
+ L L+ N L L P L +L VL+++ N + A GL KL SL
Sbjct: 342 GQLEVLALNDNQLQ-ELRPGGFLGLRNLAVLNLSSNCLRDLPERAFQGLAKLHSLHLEGG 400
Query: 300 QIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITP 359
+ L +F LS L L L N I V SL L+ L LDL+ N L L L
Sbjct: 401 CLARLGPLAFAGLSGLRRLFLKGNSIADVDERSLGGLAELLELDLTANQLTHLPGRLFQD 460
Query: 360 LKSLQELRLDDNDISMEP 377
L L+ L L N +S P
Sbjct: 461 LGRLEYLLLARNRLSALP 478
Score = 217 (81.4 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 82/279 (29%), Positives = 125/279 (44%)
Query: 100 LDCTLSNV-TVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVV 158
LD + + + +V F++ L L + + ++ GAF+G+ + L+ L L +N + +
Sbjct: 227 LDLSRNTLRSVKANVFVKLPKLQKLYLDHNLVAAVAPGAFLGMKA-LRWLDLSHNRVGSL 285
Query: 159 PTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTL 218
+ L L L LSHN L L +FK L L L L +N+L L ++ A L L
Sbjct: 286 LEDSFPGLL-GLHVLRLSHNVLAGLRPRTFKDLHFLEELQLGHNRLRQLPEEAFAGLGQL 344
Query: 219 RVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFS 278
VL L N+L GLR++ L+LS N L L L+ L L + +
Sbjct: 345 EVLALNDNQLQELRPGGFLGLRNLAVLNLSSNCLRD-LPERAFQGLAKLHSLHLEGGCLA 403
Query: 279 SVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSN 338
+ A AGL L L N I +++ S L+ L LDL N++ + G L
Sbjct: 404 RLGPLAFAGLSGLRRLFLKGNSIADVDERSLGGLAELLELDLTANQLTHLPGRLFQDLGR 463
Query: 339 LTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEP 377
L L L+ N L AL D + PL+ L + N + P
Sbjct: 464 LEYLLLARNRLSALPADALGPLQRTFWLDVSHNRLEALP 502
Score = 208 (78.3 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 84/273 (30%), Positives = 122/273 (44%)
Query: 100 LDCTLSNV-TVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVV 158
LD + + V ++L F + LH L +S L + F L L+ L L +N L +
Sbjct: 275 LDLSHNRVGSLLEDSFPGLLGLHVLRLSHNVLAGLRPRTFKDLHF-LEELQLGHNRLRQL 333
Query: 159 PTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTL 218
P A A L L+ L L+ NQL +L F GL +L L+LS N L L + L L
Sbjct: 334 PEEAFAGLG-QLEVLALNDNQLQELRPGGFLGLRNLAVLNLSSNCLRDLPERAFQGLAKL 392
Query: 219 RVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFS 278
L L+G L A GL + L L N +A + ++ L+ L L + NQ +
Sbjct: 393 HSLHLEGGCLARLGPLAFAGLSGLRRLFLKGNSIAD-VDERSLGGLAELLELDLTANQLT 451
Query: 279 SVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSN 338
+ L +L L N++ L + L LD++HNR+ A+ A+LA LS
Sbjct: 452 HLPGRLFQDLGRLEYLLLARNRLSALPADALGPLQRTFWLDVSHNRLEALPAAALAPLSR 511
Query: 339 LTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
L L L +N LR P L+ L L+ N
Sbjct: 512 LRFLSLRNNSLRTFAPQ--PP--GLERLWLEGN 540
Score = 159 (61.0 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 80/277 (28%), Positives = 119/277 (42%)
Query: 68 LPHTLRCTANKSDLYAISES-LRGLEPDERVSLLDCTLSNVTV-----LPGKFLEGVT-L 120
LP + ++ A++++ L+ L P + L + + N++ LP + +G+ L
Sbjct: 333 LPEEAFAGLGQLEVLALNDNQLQELRPGGFLGLRNLAVLNLSSNCLRDLPERAFQGLAKL 392
Query: 121 HGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQL 180
H L + G L + AF GLS L+ L L N ++ V +L LA L+ LDL+ NQL
Sbjct: 393 HSLHLEGGCLARLGPLAFAGLSG-LRRLFLKGNSIADVDERSLGGLAELLE-LDLTANQL 450
Query: 181 YKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLR 240
L F+ L L +L L+ N+L L D L PL L + NRL AAL L
Sbjct: 451 THLPGRLFQDLGRLEYLLLARNRLSALPADALGPLQRTFWLDVSHNRLEALPAAALAPLS 510
Query: 241 SVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFS-SVRRGALAGLDKLTSLSCHHN 299
+ L L +N L + P+ L+ L + N + GAL S
Sbjct: 511 RLRFLSLRNNSLR-----TFAPQPPGLERLWLEGNPWDCGCALGALRAFALQQPASVPRF 565
Query: 300 QIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHL 336
+ E + R L A+N I S SLA L
Sbjct: 566 VQALAEGNDDRQPPVL-----AYNNITCASPPSLAGL 597
Score = 62 (26.9 bits), Expect = 8.6e-23, Sum P(2) = 8.6e-23
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
L L+ L + HN+ + A AGL +L L+ + NQ+ L F
Sbjct: 317 LHFLEELQLGHNRLRQLPEEAFAGLGQLEVLALNDNQLQELRPGGF 362
Score = 62 (26.9 bits), Expect = 8.6e-23, Sum P(2) = 8.6e-23
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L+VL++ NQ +R G GL L L+ N + L + +F +
Sbjct: 341 LGQLEVLALNDNQLQELRPGGFLGLRNLAVLNLSSNCLRDLPERAFQGL 389
Score = 55 (24.4 bits), Expect = 1.6e-22, Sum P(2) = 1.6e-22
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 650 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
L ++HN+ ++ ALA L +L LS +N +
Sbjct: 491 LDVSHNRLEALPAAALAPLSRLRFLSLRNNSL 522
Score = 55 (24.4 bits), Expect = 4.6e-22, Sum P(2) = 4.6e-22
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL 684
L L+ L +A N+ S++ AL L + L HN+++ L
Sbjct: 461 LGRLEYLLLARNRLSALPADALGPLQRTFWLDVSHNRLEAL 501
Score = 52 (23.4 bits), Expect = 9.5e-22, Sum P(2) = 9.5e-22
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
LS L+ L + N + V +L GL +L L NQ+ L F ++
Sbjct: 413 LSGLRRLFLKGNSIADVDERSLGGLAELLELDLTANQLTHLPGRLFQDL 461
>FB|FBgn0261269 [details] [associations]
symbol:conv "convoluted" species:7227 "Drosophila
melanogaster" [GO:0035151 "regulation of tube size, open tracheal
system" evidence=IMP] [GO:0007424 "open tracheal system
development" evidence=IMP] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0035159 "regulation of tube length, open tracheal
system" evidence=IMP] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 EMBL:AE013599 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0008045
GeneTree:ENSGT00690000101816 GO:GO:0035159 InterPro:IPR026906
Pfam:PF13306 EMBL:EU814872 RefSeq:NP_610948.2 UniGene:Dm.23922
SMR:A1Z9N6 STRING:A1Z9N6 EnsemblMetazoa:FBtr0087540 GeneID:36588
KEGG:dme:Dmel_CG8561 UCSC:CG8561-RA CTD:36588 FlyBase:FBgn0261269
InParanoid:A1Z9N6 OMA:TIVCENT OrthoDB:EOG4ZGMT6 GenomeRNAi:36588
NextBio:799366 Uniprot:A1Z9N6
Length = 1092
Score = 268 (99.4 bits), Expect = 2.1e-22, Sum P(2) = 2.1e-22
Identities = 85/279 (30%), Positives = 138/279 (49%)
Query: 97 VSLLDCTLSNVTVLPGK-FLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLL 155
+ +L+ + +++T +P F + LH + +S + +I +G F L S L+++ L +N +
Sbjct: 439 LKVLNASYNSITEIPKNCFPKLYELHTIDVSHNNISSIFNGVFQTLFS-LRSIDLSHNSM 497
Query: 156 SVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPL 215
+ +S L P L +DLSHN+L + S L+SL L L+ N+L L Q P
Sbjct: 498 REIKSSTFGTL-PTLLEMDLSHNELVSVVRGSLAKLTSLRQLYLNNNQLEKLFQ---LP- 552
Query: 216 VTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHN 275
++L L NRLT + S+ LDLSHN L L + L ++ L + +N
Sbjct: 553 ISLNELYFSHNRLTNIPSGTWPVMNSLIYLDLSHNQLGDTLNGESFTGLLVVQRLKLQNN 612
Query: 276 QFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAH 335
S + A+A + L L +N I LE +F L L L+L N++ +S +
Sbjct: 613 GISQPPKDAVAVMSTLQYLHLENNNITTLERSAFGKLPVLFELNLYGNQVKDISKRAFEG 672
Query: 336 LSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 374
L L TL+LS N ++ L D+ L SL+ L L N ++
Sbjct: 673 LLQLLTLNLSSNGIQTLQNDIFVGLPSLRNLDLSFNSLT 711
Score = 251 (93.4 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
Identities = 99/408 (24%), Positives = 178/408 (43%)
Query: 83 AISESLRGLEPDERV-SLLDCTLSNVTVLPGKFLEGVT-LHGLVISSGELKNISDGAFIG 140
A+SE RG V +L + + + L G+ L L +S L +I G F G
Sbjct: 257 ALSELSRGTFARNSVLKVLHLSHNQIARLDANSFRGMRFLRRLFLSDNVLTDIGRGTF-G 315
Query: 141 LSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLS 200
+ + + L N L + + ++ LDL+ N + K+E SFK + +++S
Sbjct: 316 SIARIGTIDLARNRLKKIEFQMFTQMN-YVELLDLAENNITKIEKNSFKDIYQA-IINVS 373
Query: 201 YNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPST 260
+N L + V + VL L NRL + T LS+N L L
Sbjct: 374 HNALELIETAAFENCVNITVLDLSHNRLANFSRRSFDETTFATYFQLSYNNLTN-LAQIP 432
Query: 261 VPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 320
+ ++ LKVL+ ++N + + + L +L ++ HN I + + F+ L +L +DL
Sbjct: 433 IQNMTGLKVLNASYNSITEIPKNCFPKLYELHTIDVSHNNISSIFNGVFQTLFSLRSIDL 492
Query: 321 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS---MEP 377
+HN + + ++ L L +DLSHN L ++ + + L SL++L L++N + P
Sbjct: 493 SHNSMREIKSSTFGTLPTLLEMDLSHNELVSVVRGSLAKLTSLRQLYLNNNQLEKLFQLP 552
Query: 378 ECIY-VGFNTMDLELIYSGVWRHSTLLIPVMLSLCTRSSVVTRYRYCVVLIEGSNILDQS 436
+ + F+ L I SG W LI + LS + + +L+ L +
Sbjct: 553 ISLNELYFSHNRLTNIPSGTWPVMNSLIYLDLSHNQLGDTLNGESFTGLLVVQRLKLQNN 612
Query: 437 ALVLGCSEILALVPTLTSQPL--SYVTSLRANVTGLGTVQVYVQLWTN 482
+ + +A++ TL L + +T+L + G V + L+ N
Sbjct: 613 GISQPPKDAVAVMSTLQYLHLENNNITTLERSAFGKLPVLFELNLYGN 660
Score = 244 (91.0 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 97/328 (29%), Positives = 154/328 (46%)
Query: 59 IKNDLCACDLPHT-LRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEG 117
+ N L DL H L T N ES GL +R+ L + +S P K
Sbjct: 575 VMNSLIYLDLSHNQLGDTLN-------GESFTGLLVVQRLKLQNNGISQ----PPKDAVA 623
Query: 118 V--TLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDL 175
V TL L + + + + AF G L L L N + + A L L L+L
Sbjct: 624 VMSTLQYLHLENNNITTLERSAF-GKLPVLFELNLYGNQVKDISKRAFEGLLQLLT-LNL 681
Query: 176 SHNQLYKLENTSFKGLSSLNFLDLSYNKLMTL---SQDCLAPLVTLRVLRLQGNRL---T 229
S N + L+N F GL SL LDLS+N L L + L L++L L L NR+ T
Sbjct: 682 SSNGIQTLQNDIFVGLPSLRNLDLSFNSLTKLDNKTNGVLDDLLSLETLDLSHNRISFVT 741
Query: 230 VSVVAALQGLR-SVTDLDLSHNLLAGPLGPSTVP-RLSSLKVLSIAHNQFSSVRRGALAG 287
+ Q + ++ +L+LS+NL+ P+ + L L ++HNQ + +RRG ++
Sbjct: 742 KKTFPSHQYIPYNLRNLNLSYNLM--PILTYDITFGTKKLVRLDVSHNQINDLRRGVISN 799
Query: 288 LDKLTSLSCHHNQIDVL--EDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLS 345
L SL +N++ L E+H F LS LDL+HN+I + A+L + +L +DL+
Sbjct: 800 FTSLQSLDMSYNELSNLKSEEHIFDLPQNLSWLDLSHNKIYHLPFANLVKVKSLKYVDLT 859
Query: 346 HNFLRALTQDLITPLKSLQELRLDDNDI 373
+N L + ++ +++ ++ L N +
Sbjct: 860 NNSLEDVPASIVGSMRNGSQVLLAGNPL 887
Score = 238 (88.8 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 93/298 (31%), Positives = 142/298 (47%)
Query: 112 GKFLEGVTLHGL-VISSGELKN--ISDGA--FIGLSSPLQALGLPNNLLSVVPTSALAPL 166
G L G + GL V+ +L+N IS + + S LQ L L NN ++ + SA L
Sbjct: 590 GDTLNGESFTGLLVVQRLKLQNNGISQPPKDAVAVMSTLQYLHLENNNITTLERSAFGKL 649
Query: 167 APNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGN 226
P L L+L NQ+ + +F+GL L L+LS N + TL D L +LR L L N
Sbjct: 650 -PVLFELNLYGNQVKDISKRAFEGLLQLLTLNLSSNGIQTLQNDIFVGLPSLRNLDLSFN 708
Query: 227 RLTV---SVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLS----SLKVLSIAHNQFSS 279
LT L L S+ LDLSHN ++ + T P +L+ L++++N
Sbjct: 709 SLTKLDNKTNGVLDDLLSLETLDLSHNRISF-VTKKTFPSHQYIPYNLRNLNLSYNLMPI 767
Query: 280 VRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAV-SGASLAHL-S 337
+ G KL L HNQI+ L ++L LD+++N + + S + L
Sbjct: 768 LTYDITFGTKKLVRLDVSHNQINDLRRGVISNFTSLQSLDMSYNELSNLKSEEHIFDLPQ 827
Query: 338 NLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELIYSG 395
NL+ LDLSHN + L + +KSL+ + L +N + P I VG +++ +G
Sbjct: 828 NLSWLDLSHNKIYHLPFANLVKVKSLKYVDLTNNSLEDVPASI-VGSMRNGSQVLLAG 884
Score = 224 (83.9 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 79/307 (25%), Positives = 134/307 (43%)
Query: 72 LRCTANKSDLYAISESLRGLEP-DERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGEL 130
+RC ++L +S +L+ L + L + L G + L+I L
Sbjct: 53 IRC--ENTNLATLSVALQNLASFGMPIEELTIYRGHFVRLYGPLFAHIKARMLIIEETPL 110
Query: 131 KNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKG 190
I D F G+++ L+ L L LS V L L + + +L F G
Sbjct: 111 ATIEDYVFYGVNNTLEQLHLLRTNLSHVGLLGFGILG-KAKELVIDGHAFQQLPKDLFAG 169
Query: 191 ---LSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDL 247
+SL + ++ L L + PL L+ L L GN+L + LR + LD+
Sbjct: 170 QEIANSLGIIRVTNGNLSDLPIETFQPLRKLKTLDLHGNQLENLKRNQFKNLRELEVLDI 229
Query: 248 SHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDH 307
SHN + L + L+ L +++HN S + RG A L L HNQI L+ +
Sbjct: 230 SHNQIK-KLEAQHIADLTKLGWCNVSHNALSELSRGTFARNSVLKVLHLSHNQIARLDAN 288
Query: 308 SFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELR 367
SFR + L L L+ N + + + ++ + T+DL+ N L+ + + T + ++ L
Sbjct: 289 SFRGMRFLRRLFLSDNVLTDIGRGTFGSIARIGTIDLARNRLKKIEFQMFTQMNYVELLD 348
Query: 368 LDDNDIS 374
L +N+I+
Sbjct: 349 LAENNIT 355
Score = 224 (83.9 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 88/305 (28%), Positives = 143/305 (46%)
Query: 100 LDCTLSNVT-VLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVV 158
+D + +N++ + G F +L + +S ++ I F G L + L +N L V
Sbjct: 466 IDVSHNNISSIFNGVFQTLFSLRSIDLSHNSMREIKSSTF-GTLPTLLEMDLSHNELVSV 524
Query: 159 PTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTL 218
+LA L +L +L L++NQL KL F+ SLN L S+N+L + + +L
Sbjct: 525 VRGSLAKLT-SLRQLYLNNNQLEKL----FQLPISLNELYFSHNRLTNIPSGTWPVMNSL 579
Query: 219 RVLRLQGNRLTVSVVA-ALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQF 277
L L N+L ++ + GL V L L +N ++ P V +S+L+ L + +N
Sbjct: 580 IYLDLSHNQLGDTLNGESFTGLLVVQRLKLQNNGISQP-PKDAVAVMSTLQYLHLENNNI 638
Query: 278 SSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLS 337
+++ R A L L L+ + NQ+ + +F L L L+L+ N I + L
Sbjct: 639 TTLERSAFGKLPVLFELNLYGNQVKDISKRAFEGLLQLLTLNLSSNGIQTLQNDIFVGLP 698
Query: 338 NLTTLDLSHNFLRAL---TQDLITPLKSLQELRLDDNDISME-----PECIYVGFNTMDL 389
+L LDLS N L L T ++ L SL+ L L N IS P Y+ +N +L
Sbjct: 699 SLRNLDLSFNSLTKLDNKTNGVLDDLLSLETLDLSHNRISFVTKKTFPSHQYIPYNLRNL 758
Query: 390 ELIYS 394
L Y+
Sbjct: 759 NLSYN 763
Score = 186 (70.5 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 83/315 (26%), Positives = 141/315 (44%)
Query: 68 LPHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISS 127
LP L + ++L ++ +RG + SL L+N L F ++L+ L S
Sbjct: 508 LPTLLEMDLSHNELVSV---VRG-SLAKLTSLRQLYLNN-NQLEKLFQLPISLNELYFSH 562
Query: 128 GELKNISDGAFIGLSSPLQALGLPNNLLS-VVPTSALAPLAPNLDRLDLSHNQLYKLENT 186
L NI G + ++S L L L +N L + + L + RL L +N + +
Sbjct: 563 NRLTNIPSGTWPVMNS-LIYLDLSHNQLGDTLNGESFTGLLV-VQRLKLQNNGISQPPKD 620
Query: 187 SFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLD 246
+ +S+L +L L N + TL + L L L L GN++ A +GL + L+
Sbjct: 621 AVAVMSTLQYLHLENNNITTLERSAFGKLPVLFELNLYGNQVKDISKRAFEGLLQLLTLN 680
Query: 247 LSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSV---RRGALAGLDKLTSLSCHHNQIDV 303
LS N + L L SL+ L ++ N + + G L L L +L HN+I
Sbjct: 681 LSSNGIQ-TLQNDIFVGLPSLRNLDLSFNSLTKLDNKTNGVLDDLLSLETLDLSHNRISF 739
Query: 304 LEDHSFRALS----TLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITP 359
+ +F + L +L+L++N + ++ L LD+SHN + L + +I+
Sbjct: 740 VTKKTFPSHQYIPYNLRNLNLSYNLMPILTYDITFGTKKLVRLDVSHNQINDLRRGVISN 799
Query: 360 LKSLQELRLDDNDIS 374
SLQ L + N++S
Sbjct: 800 FTSLQSLDMSYNELS 814
Score = 78 (32.5 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 20/60 (33%), Positives = 36/60 (60%)
Query: 625 INRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL 684
I+ +++ R +K +T L +L + ++HN+ SV RG+LA L L L ++NQ++ L
Sbjct: 490 IDLSHNSMREIK-SSTFGTLPTLLEMDLSHNELVSVVRGSLAKLTSLRQLYLNNNQLEKL 548
Score = 77 (32.2 bits), Expect = 2.1e-22, Sum P(2) = 2.1e-22
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 650 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL--EDHSF 689
L ++HNQ + +RRG ++ L SL +N++ L E+H F
Sbjct: 782 LDVSHNQINDLRRGVISNFTSLQSLDMSYNELSNLKSEEHIF 823
Score = 67 (28.6 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 646 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI-DVLEDHSFSNVI 693
SL L +HN+ +++ G ++ L L HNQ+ D L SF+ ++
Sbjct: 554 SLNELYFSHNRLTNIPSGTWPVMNSLIYLDLSHNQLGDTLNGESFTGLL 602
Score = 65 (27.9 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 13/49 (26%), Positives = 23/49 (46%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L + ++HN SS+ G L L S+ HN + ++ +F +
Sbjct: 460 LYELHTIDVSHNNISSIFNGVFQTLFSLRSIDLSHNSMREIKSSTFGTL 508
Score = 64 (27.6 bits), Expect = 3.2e-16, Sum P(2) = 3.2e-16
Identities = 17/67 (25%), Positives = 35/67 (52%)
Query: 627 RNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLED 686
+NN S+ K A ++ S+L+ L + +N +++ R A L L L+ + NQ+ +
Sbjct: 610 QNNGISQPPK-DAVAVM-STLQYLHLENNNITTLERSAFGKLPVLFELNLYGNQVKDISK 667
Query: 687 HSFSNVI 693
+F ++
Sbjct: 668 RAFEGLL 674
Score = 61 (26.5 bits), Expect = 6.6e-16, Sum P(2) = 6.6e-16
Identities = 14/58 (24%), Positives = 27/58 (46%)
Query: 624 DINRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
D++ NN S + + T L SL+ + ++HN ++ L L + HN++
Sbjct: 467 DVSHNNISSIFNGVFQT---LFSLRSIDLSHNSMREIKSSTFGTLPTLLEMDLSHNEL 521
Score = 56 (24.8 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 13/70 (18%), Positives = 37/70 (52%)
Query: 624 DINRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDV 683
D+ RN + ++ Q T ++ +++L +A N + + + + + + ++ HN +++
Sbjct: 324 DLARNRL--KKIEFQMFT-QMNYVELLDLAENNITKIEKNSFKDIYQAI-INVSHNALEL 379
Query: 684 LEDHSFSNVI 693
+E +F N +
Sbjct: 380 IETAAFENCV 389
Score = 54 (24.1 bits), Expect = 3.5e-15, Sum P(2) = 3.5e-15
Identities = 11/49 (22%), Positives = 25/49 (51%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
++ LKVL+ ++N + + + L +L ++ HN I + + F +
Sbjct: 436 MTGLKVLNASYNSITEIPKNCFPKLYELHTIDVSHNNISSIFNGVFQTL 484
Score = 51 (23.0 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 14/46 (30%), Positives = 22/46 (47%)
Query: 646 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSN 691
+L+ L++++N + G KL L HNQI+ L SN
Sbjct: 754 NLRNLNLSYNLMPILTYDITFGTKKLVRLDVSHNQINDLRRGVISN 799
Score = 49 (22.3 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 9/41 (21%), Positives = 18/41 (43%)
Query: 649 VLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
+++++HN + A +T L HN++ SF
Sbjct: 369 IINVSHNALELIETAAFENCVNITVLDLSHNRLANFSRRSF 409
Score = 46 (21.3 bits), Expect = 3.6e-19, Sum P(2) = 3.6e-19
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 644 LSSLKVLSIAHNQFSSV---RRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
L SL+ L ++ N + + G L L L +L HN+I + +F
Sbjct: 697 LPSLRNLDLSFNSLTKLDNKTNGVLDDLLSLETLDLSHNRISFVTKKTF 745
Score = 46 (21.3 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 15/54 (27%), Positives = 26/54 (48%)
Query: 630 SDSRYVKLQATTI-LLSSLKVLSIAHNQFSSVRRG-ALAGLDKLTSLSCHHNQI 681
S +R + + T +++SL L ++HNQ G + GL + L +N I
Sbjct: 561 SHNRLTNIPSGTWPVMNSLIYLDLSHNQLGDTLNGESFTGLLVVQRLKLQNNGI 614
Score = 40 (19.1 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 10/49 (20%), Positives = 21/49 (42%)
Query: 646 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNVIG 694
++ VL ++HN+ ++ R + T +N + L N+ G
Sbjct: 390 NITVLDLSHNRLANFSRRSFDETTFATYFQLSYNNLTNLAQIPIQNMTG 438
>UNIPROTKB|Q7Z2Q7 [details] [associations]
symbol:LRRC70 "Leucine-rich repeat-containing protein 70"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
GO:GO:0016021 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 InterPro:IPR000372 SMART:SM00013
EMBL:CH471137 HSSP:P24014 UniGene:Hs.482269 EMBL:AY280614
EMBL:AY358733 EMBL:AK123022 IPI:IPI00884949 RefSeq:NP_852607.3
UniGene:Hs.721348 ProteinModelPortal:Q7Z2Q7 SMR:Q7Z2Q7
STRING:Q7Z2Q7 PhosphoSite:Q7Z2Q7 DMDM:74759111 PRIDE:Q7Z2Q7
Ensembl:ENST00000334994 GeneID:100130733 KEGG:hsa:100130733
UCSC:uc011cqs.1 CTD:100130733 GeneCards:GC05P061912 HGNC:HGNC:35155
HPA:HPA013409 neXtProt:NX_Q7Z2Q7 PharmGKB:PA164722127
HOGENOM:HOG000113389 OMA:IYLKLDR OrthoDB:EOG42FSH5
GenomeRNAi:100130733 NextBio:20789232 ArrayExpress:Q7Z2Q7
Bgee:Q7Z2Q7 Genevestigator:Q7Z2Q7 Uniprot:Q7Z2Q7
Length = 622
Score = 289 (106.8 bits), Expect = 2.7e-22, P = 2.7e-22
Identities = 94/305 (30%), Positives = 154/305 (50%)
Query: 84 ISES-LRGLEPDERVSLLDCTLSNVTVL---PGKFLEGVTLHGLVISSGELKNISDGAFI 139
I+ES L GL SL+ L N +L P F++ L+ L +++ +K + G F
Sbjct: 75 INESELTGLH-----SLVALYLDNSNILYVYPKAFVQLRHLYFLFLNNNFIKRLDPGIFK 129
Query: 140 GLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDL 199
GL + L+ L L N +S VP L ++ L+L N+L L + +F G+ +L LDL
Sbjct: 130 GLLN-LRNLYLQYNQVSFVPRGVFNDLV-SVQYLNLQRNRLTVLGSGTFVGMVALRILDL 187
Query: 200 SYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPS 259
S N ++ +S+ L L L L N LT A + L+S+ L LSHN + + P
Sbjct: 188 SNNNILRISESGFQHLENLACLYLGSNNLTKVPSNAFEVLKSLRRLSLSHNPIEA-IQPF 246
Query: 260 TVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 319
L++L+ L + +++ +V R +G++ L L HN ++ L +F L L +L
Sbjct: 247 AFKGLANLEYLLLKNSRIRNVTRDGFSGINNLKHLILSHNDLENLNSDTFSLLKNLIYLK 306
Query: 320 LAHNRIVAVSGASLAHL-SNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPE 378
L NRI+++ + ++ ++L L+LS N L AL ++ PL SL L+ + N E
Sbjct: 307 LDRNRIISIDNDTFENMGASLKILNLSFNNLTALHPRVLKPLSSLIHLQANSNP--WECN 364
Query: 379 CIYVG 383
C +G
Sbjct: 365 CKLLG 369
Score = 288 (106.4 bits), Expect = 2.4e-22, Sum P(2) = 2.4e-22
Identities = 97/311 (31%), Positives = 157/311 (50%)
Query: 100 LDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPN-NLLSVV 158
++C ++ +P F E L ++ + I++ GL S L AL L N N+L V
Sbjct: 44 INCRNLGLSSIPKNFPESTVF--LYLTGNNISYINESELTGLHS-LVALYLDNSNILYVY 100
Query: 159 PTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTL 218
P A L +L L L++N + +L+ FKGL +L L L YN++ + + LV++
Sbjct: 101 P-KAFVQLR-HLYFLFLNNNFIKRLDPGIFKGLLNLRNLYLQYNQVSFVPRGVFNDLVSV 158
Query: 219 RVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFS 278
+ L LQ NRLTV G+ ++ LDLS+N + + S L +L L + N +
Sbjct: 159 QYLNLQRNRLTVLGSGTFVGMVALRILDLSNNNILR-ISESGFQHLENLACLYLGSNNLT 217
Query: 279 SVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSN 338
V A L L LS HN I+ ++ +F+ L+ L +L L ++RI V+ + ++N
Sbjct: 218 KVPSNAFEVLKSLRRLSLSHNPIEAIQPFAFKGLANLEYLLLKNSRIRNVTRDGFSGINN 277
Query: 339 LTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI-SMEPECIY-VGFNTMDLELIYSGV 396
L L LSHN L L D + LK+L L+LD N I S++ + +G + L L ++ +
Sbjct: 278 LKHLILSHNDLENLNSDTFSLLKNLIYLKLDRNRIISIDNDTFENMGASLKILNLSFNNL 337
Query: 397 WR-HSTLLIPV 406
H +L P+
Sbjct: 338 TALHPRVLKPL 348
Score = 181 (68.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 90/371 (24%), Positives = 157/371 (42%)
Query: 148 LGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTL 207
L L N +S + S L L +L L L ++ + + +F L L FL L+ N + L
Sbjct: 65 LYLTGNNISYINESELTGLH-SLVALYLDNSNILYVYPKAFVQLRHLYFLFLNNNFIKRL 123
Query: 208 SQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSL 267
L+ LR L LQ N+++ L SV L+L N L LG T + +L
Sbjct: 124 DPGIFKGLLNLRNLYLQYNQVSFVPRGVFNDLVSVQYLNLQRNRLT-VLGSGTFVGMVAL 182
Query: 268 KVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVA 327
++L +++N + L+ L L N + + ++F L +L L L+HN I A
Sbjct: 183 RILDLSNNNILRISESGFQHLENLACLYLGSNNLTKVPSNAFEVLKSLRRLSLSHNPIEA 242
Query: 328 VSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTM 387
+ + L+NL L L ++ +R +T+D + + +L+ L L ND+ + +T
Sbjct: 243 IQPFAFKGLANLEYLLLKNSRIRNVTRDGFSGINNLKHLILSHNDLEN------LNSDTF 296
Query: 388 DL--ELIYSGVWRHSTLLIPVMLSLCTRSSVVTRYRYCVVLIEGSNILDQSALVLG-CSE 444
L LIY + R+ + I T ++ + ++ + +N+ VL S
Sbjct: 297 SLLKNLIYLKLDRNRIISI----DNDTFENMGASLK--ILNLSFNNLTALHPRVLKPLSS 350
Query: 445 ILALVPTLTSQPLSYVTSLRANVTGLGTVQVYVQLWTNYDPNCLLTITLYIDGDVIVQKN 504
++ L S P L L + + + ++ P+ YI+ V +
Sbjct: 351 LIHL--QANSNPWECNCKLLGLRDWLASSAITLNIYCQNPPSMRGRALRYINITNCVTSS 408
Query: 505 TNCSRPWVSLK 515
N SR W +K
Sbjct: 409 INVSRAWAVVK 419
Score = 46 (21.3 bits), Expect = 2.4e-22, Sum P(2) = 2.4e-22
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 645 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 679
+SLK+L+++ N +++ L L L L + N
Sbjct: 325 ASLKILNLSFNNLTALHPRVLKPLSSLIHLQANSN 359
>MGI|MGI:107935 [details] [associations]
symbol:Lrig1 "leucine-rich repeats and immunoglobulin-like
domains 1" species:10090 "Mus musculus" [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:107935 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GeneTree:ENSGT00690000101816 Pfam:PF01463 CTD:26018
HOGENOM:HOG000113380 HOVERGEN:HBG052353 OMA:ESNGVCP
OrthoDB:EOG48PMJN ChiTaRS:LRIG1 EMBL:D78572 EMBL:AC122272
EMBL:AC155330 IPI:IPI00136475 PIR:A58532 RefSeq:NP_032403.2
UniGene:Mm.245210 ProteinModelPortal:P70193 SMR:P70193
STRING:P70193 PhosphoSite:P70193 PaxDb:P70193 PRIDE:P70193
Ensembl:ENSMUST00000032105 Ensembl:ENSMUST00000101126 GeneID:16206
KEGG:mmu:16206 UCSC:uc009czu.1 InParanoid:P70193 NextBio:289161
Bgee:P70193 Genevestigator:P70193 GermOnline:ENSMUSG00000030029
Uniprot:P70193
Length = 1091
Score = 287 (106.1 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 89/284 (31%), Positives = 142/284 (50%)
Query: 97 VSLLDCTLSNVTVLPGK-FLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLL 155
+ +LD + +N+T + F G+ + L ++S + + GAF GLS L L L N +
Sbjct: 143 LEVLDLSSNNITEIRSSCFPNGLRIRELNLASNRISILESGAFDGLSRSLLTLRLSKNRI 202
Query: 156 SVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPL 215
+ +P A P L +LDL+ N++ +E +F+GL SL L L N + L+ L
Sbjct: 203 TQLPVKAFK--LPRLTQLDLNRNRIRLIEGLTFQGLDSLEVLRLQRNNISRLTDGAFWGL 260
Query: 216 VTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPL--GPSTVPRLSSLKVLSIA 273
+ VL L+ N L +L GL ++ L LS+N ++ G S +L L +LS
Sbjct: 261 SKMHVLHLEYNSLVEVNSGSLYGLTALHQLHLSNNSISRIQRDGWSFCQKLHEL-ILSF- 318
Query: 274 HNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAV----S 329
N + + +LA L L+ L HN I + + +F+ L +L LDL HN I S
Sbjct: 319 -NNLTRLDEESLAELSSLSILRLSHNAISHIAEGAFKGLKSLRVLDLDHNEISGTIEDTS 377
Query: 330 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 373
GA L NL+ L L N ++++ + + L+SL+ L L +N I
Sbjct: 378 GA-FTGLDNLSKLTLFGNKIKSVAKRAFSGLESLEHLNLGENAI 420
Score = 249 (92.7 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 94/327 (28%), Positives = 156/327 (47%)
Query: 67 DLPHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEG-VTLHGLVI 125
DL + N ++L AI SL G VSL + + + G L+ ++L L +
Sbjct: 92 DLTNLQEVYLNSNELTAIP-SL-GAASIGVVSLF-LQHNKILSVDGSQLKSYLSLEVLDL 148
Query: 126 SSGELKNISDGAFI-GLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLE 184
SS + I F GL ++ L L +N +S++ + A L+ +L L LS N++ +L
Sbjct: 149 SSNNITEIRSSCFPNGLR--IRELNLASNRISILESGAFDGLSRSLLTLRLSKNRITQLP 206
Query: 185 NTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTD 244
+FK L L LDL+ N++ + L +L VLRLQ N ++ A GL +
Sbjct: 207 VKAFK-LPRLTQLDLNRNRIRLIEGLTFQGLDSLEVLRLQRNNISRLTDGAFWGLSKMHV 265
Query: 245 LDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL 304
L L +N L + ++ L++L L +++N S ++R + KL L N + L
Sbjct: 266 LHLEYNSLV-EVNSGSLYGLTALHQLHLSNNSISRIQRDGWSFCQKLHELILSFNNLTRL 324
Query: 305 EDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDL---ITPLK 361
++ S LS+LS L L+HN I ++ + L +L LDL HN + +D T L
Sbjct: 325 DEESLAELSSLSILRLSHNAISHIAEGAFKGLKSLRVLDLDHNEISGTIEDTSGAFTGLD 384
Query: 362 SLQELRLDDNDISMEPECIYVGFNTMD 388
+L +L L N I + + G +++
Sbjct: 385 NLSKLTLFGNKIKSVAKRAFSGLESLE 411
Score = 248 (92.4 bits), Expect = 2.4e-17, P = 2.4e-17
Identities = 81/277 (29%), Positives = 133/277 (48%)
Query: 96 RVSLLDCTLSNVTVLPGKFLEGVT--LHGLVISSGELKNISDGAFIGLSSP-LQALGLPN 152
R+ L+ + +++L +G++ L L +S + + AF P L L L
Sbjct: 166 RIRELNLASNRISILESGAFDGLSRSLLTLRLSKNRITQLPVKAF---KLPRLTQLDLNR 222
Query: 153 NLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCL 212
N + ++ L +L+ L L N + +L + +F GLS ++ L L YN L+ ++ L
Sbjct: 223 NRIRLIEGLTFQGL-DSLEVLRLQRNNISRLTDGAFWGLSKMHVLHLEYNSLVEVNSGSL 281
Query: 213 APLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSI 272
L L L L N ++ + + +L LS N L L ++ LSSL +L +
Sbjct: 282 YGLTALHQLHLSNNSISRIQRDGWSFCQKLHELILSFNNLTR-LDEESLAELSSLSILRL 340
Query: 273 AHNQFSSVRRGALAGLDKLTSLSCHHNQID-VLEDHS--FRALSTLSHLDLAHNRIVAVS 329
+HN S + GA GL L L HN+I +ED S F L LS L L N+I +V+
Sbjct: 341 SHNAISHIAEGAFKGLKSLRVLDLDHNEISGTIEDTSGAFTGLDNLSKLTLFGNKIKSVA 400
Query: 330 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQEL 366
+ + L +L L+L N +R++ D +K+L+EL
Sbjct: 401 KRAFSGLESLEHLNLGENAIRSVQFDAFAKMKNLKEL 437
Score = 239 (89.2 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 83/258 (32%), Positives = 126/258 (48%)
Query: 98 SLLDCTLSN--VTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLL 155
SLL LS +T LP K + L L ++ ++ I F GL S L+ L L N +
Sbjct: 191 SLLTLRLSKNRITQLPVKAFKLPRLTQLDLNRNRIRLIEGLTFQGLDS-LEVLRLQRNNI 249
Query: 156 SVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPL 215
S + A L+ + L L +N L ++ + S GL++L+ L LS N + + +D +
Sbjct: 250 SRLTDGAFWGLS-KMHVLHLEYNSLVEVNSGSLYGLTALHQLHLSNNSISRIQRDGWSFC 308
Query: 216 VTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHN 275
L L L N LT +L L S++ L LSHN ++ + L SL+VL + HN
Sbjct: 309 QKLHELILSFNNLTRLDEESLAELSSLSILRLSHNAISH-IAEGAFKGLKSLRVLDLDHN 367
Query: 276 QFSSV---RRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGAS 332
+ S GA GLD L+ L+ N+I + +F L +L HL+L N I +V +
Sbjct: 368 EISGTIEDTSGAFTGLDNLSKLTLFGNKIKSVAKRAFSGLESLEHLNLGENAIRSVQFDA 427
Query: 333 LAHLSNLTTLDLS-HNFL 349
A + NL L +S +FL
Sbjct: 428 FAKMKNLKELYISSESFL 445
Score = 183 (69.5 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 60/208 (28%), Positives = 105/208 (50%)
Query: 168 PNLDR-LDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGN 226
P+ R L+LS+N+L ++++ +F+ L++L + L+ N+L + A + + + LQ N
Sbjct: 69 PSWTRSLNLSYNRLSEIDSAAFEDLTNLQEVYLNSNELTAIPSLGAASIGVVSLF-LQHN 127
Query: 227 RLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALA 286
++ + L+ S+ LDLS N + + S P ++ L++A N+ S + GA
Sbjct: 128 KILSVDGSQLKSYLSLEVLDLSSNNIT-EIRSSCFPNGLRIRELNLASNRISILESGAFD 186
Query: 287 GLDK-LTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLS 345
GL + L +L N+I L +F+ L L+ LDL NRI + G + L +L L L
Sbjct: 187 GLSRSLLTLRLSKNRITQLPVKAFK-LPRLTQLDLNRNRIRLIEGLTFQGLDSLEVLRLQ 245
Query: 346 HNFLRALTQDLITPLKSLQELRLDDNDI 373
N + LT L + L L+ N +
Sbjct: 246 RNNISRLTDGAFWGLSKMHVLHLEYNSL 273
Score = 90 (36.7 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 20/46 (43%), Positives = 26/46 (56%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID-VLEDHS 688
LSSL +L ++HN S + GA GL L L HN+I +ED S
Sbjct: 332 LSSLSILRLSHNAISHIAEGAFKGLKSLRVLDLDHNEISGTIEDTS 377
Score = 78 (32.5 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 644 LSSLKVLSIAHNQFSSV---RRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L SL+VL + HN+ S GA GLD L+ L+ N+I + +FS +
Sbjct: 356 LKSLRVLDLDHNEISGTIEDTSGAFTGLDNLSKLTLFGNKIKSVAKRAFSGL 407
Score = 60 (26.2 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFS 690
LS + VL + +N V G+L GL L L +N I ++ +S
Sbjct: 260 LSKMHVLHLEYNSLVEVNSGSLYGLTALHQLHLSNNSISRIQRDGWS 306
Score = 58 (25.5 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 14/49 (28%), Positives = 27/49 (55%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L +L L++ N+ SV + A +GL+ L L+ N I ++ +F+ +
Sbjct: 383 LDNLSKLTLFGNKIKSVAKRAFSGLESLEHLNLGENAIRSVQFDAFAKM 431
Score = 50 (22.7 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 17/65 (26%), Positives = 30/65 (46%)
Query: 628 NNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDH 687
NNS SR ++ + L L ++ N + + +LA L L+ L HN I + +
Sbjct: 294 NNSISR-IQRDGWSFC-QKLHELILSFNNLTRLDEESLAELSSLSILRLSHNAISHIAEG 351
Query: 688 SFSNV 692
+F +
Sbjct: 352 AFKGL 356
>RGD|70551 [details] [associations]
symbol:Lrrc15 "leucine rich repeat containing 15" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IDA]
[GO:0007154 "cell communication" evidence=TAS] [GO:0016021 "integral
to membrane" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 RGD:70551 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005622
InterPro:IPR000372 SMART:SM00013 GO:GO:0007154 CTD:131578
HOVERGEN:HBG052343 EMBL:AB071036 IPI:IPI00201949 RefSeq:NP_659551.1
UniGene:Rn.213072 ProteinModelPortal:Q8R5M3 PRIDE:Q8R5M3
GeneID:246296 KEGG:rno:246296 UCSC:RGD:70551 NextBio:623686
Genevestigator:Q8R5M3 Uniprot:Q8R5M3
Length = 578
Score = 264 (98.0 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 84/268 (31%), Positives = 127/268 (47%)
Query: 105 SNVTVLPGKFLEG-VTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSAL 163
+N+ +P + + V L L + ++S F L + LQ L L N LS +P
Sbjct: 159 NNLESIPEEAFDHLVGLTKLNLGRNSFTHLSPRLFQHLGN-LQVLRLHENRLSDIPMGTF 217
Query: 164 APLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRL 223
L NL L L NQ+ L F +L L LS N + L L L L L
Sbjct: 218 DALG-NLQELALQENQIGTLSPGLFHNNRNLQRLYLSNNHISQLPPGIFMQLPQLNKLTL 276
Query: 224 QGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRG 283
GN L + ++ +L L +N + L +T L+ L+VL ++HNQ + + G
Sbjct: 277 FGNSLRELSPGVFGPMPNLRELWLYNNHITS-LADNTFSHLNQLQVLILSHNQLTYISPG 335
Query: 284 ALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLD 343
A GL L LS H N + L+ + FR+L+ L ++ L NR+ + G+ A+++ LTT+
Sbjct: 336 AFNGLTNLRELSLHTNALQDLDSNVFRSLANLQNISLQSNRLRQLPGSIFANVNGLTTIQ 395
Query: 344 LSHNFLRALTQDLITPLKSLQELRLDDN 371
L +N L L + L +L ELRL DN
Sbjct: 396 LQNNNLENLPLGIFDHLVNLCELRLYDN 423
Score = 245 (91.3 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 82/291 (28%), Positives = 132/291 (45%)
Query: 98 SLLDCTLSN--VTVLPGKFLEGVT-LHGLVISSGELKNISDGAFIGLSSPLQALGLPNNL 154
SL +L+N + +LP + + V L L++S+ +L I F S+ L+ L L N
Sbjct: 102 SLRYLSLANNKLRMLPIRVFQDVNNLESLLLSNNQLVQIQPAQFSQFSN-LRELQLHGNN 160
Query: 155 LSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAP 214
L +P A L L +L+L N L F+ L +L L L N+L +
Sbjct: 161 LESIPEEAFDHLV-GLTKLNLGRNSFTHLSPRLFQHLGNLQVLRLHENRLSDIPMGTFDA 219
Query: 215 LVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAH 274
L L+ L LQ N++ R++ L LS+N ++ L P +L L L++
Sbjct: 220 LGNLQELALQENQIGTLSPGLFHNNRNLQRLYLSNNHIS-QLPPGIFMQLPQLNKLTLFG 278
Query: 275 NQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLA 334
N + G + L L ++N I L D++F L+ L L L+HN++ +S +
Sbjct: 279 NSLRELSPGVFGPMPNLRELWLYNNHITSLADNTFSHLNQLQVLILSHNQLTYISPGAFN 338
Query: 335 HLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFN 385
L+NL L L N L+ L ++ L +LQ + L N + P I+ N
Sbjct: 339 GLTNLRELSLHTNALQDLDSNVFRSLANLQNISLQSNRLRQLPGSIFANVN 389
Score = 241 (89.9 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
Identities = 96/331 (29%), Positives = 143/331 (43%)
Query: 64 CACDLPHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGK-FLEGVTLHG 122
C C + CT + + A+ L P +SL +++T LP FL L
Sbjct: 29 CTCSRASQVECTGAR--IVAMPTPL----PWNAMSL-QVVNTHITELPENLFLNISALIA 81
Query: 123 LVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYK 182
L + EL I GAF L S L+ L L NN L ++P + NL+ L LS+NQL +
Sbjct: 82 LKMEKNELSTIMPGAFRNLGS-LRYLSLANNKLRMLPIRVFQDVN-NLESLLLSNNQLVQ 139
Query: 183 LENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSV 242
++ F S+L L L N L ++ ++ LV L L L N T Q L ++
Sbjct: 140 IQPAQFSQFSNLRELQLHGNNLESIPEEAFDHLVGLTKLNLGRNSFTHLSPRLFQHLGNL 199
Query: 243 TDLDLSHNLLAG-PLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 301
L L N L+ P+G T L +L+ L++ NQ ++ G L L +N I
Sbjct: 200 QVLRLHENRLSDIPMG--TFDALGNLQELALQENQIGTLSPGLFHNNRNLQRLYLSNNHI 257
Query: 302 DVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLK 361
L F L L+ L L N + +S + NL L L +N + +L + + L
Sbjct: 258 SQLPPGIFMQLPQLNKLTLFGNSLRELSPGVFGPMPNLRELWLYNNHITSLADNTFSHLN 317
Query: 362 SLQELRLDDNDISMEPECIYVGF-NTMDLEL 391
LQ L L N ++ + G N +L L
Sbjct: 318 QLQVLILSHNQLTYISPGAFNGLTNLRELSL 348
Score = 235 (87.8 bits), Expect = 4.2e-17, Sum P(2) = 4.2e-17
Identities = 75/264 (28%), Positives = 124/264 (46%)
Query: 108 TVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLA 167
T++PG F +L L +++ +L+ + F +++ L++L L NN L + + + +
Sbjct: 91 TIMPGAFRNLGSLRYLSLANNKLRMLPIRVFQDVNN-LESLLLSNNQLVQIQPAQFSQFS 149
Query: 168 PNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNR 227
NL L L N L + +F L L L+L N LS L L+VLRL NR
Sbjct: 150 -NLRELQLHGNNLESIPEEAFDHLVGLTKLNLGRNSFTHLSPRLFQHLGNLQVLRLHENR 208
Query: 228 LTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAG 287
L+ + L ++ +L L N + G L P +L+ L +++N S + G
Sbjct: 209 LSDIPMGTFDALGNLQELALQENQI-GTLSPGLFHNNRNLQRLYLSNNHISQLPPGIFMQ 267
Query: 288 LDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHN 347
L +L L+ N + L F + L L L +N I +++ + +HL+ L L LSHN
Sbjct: 268 LPQLNKLTLFGNSLRELSPGVFGPMPNLRELWLYNNHITSLADNTFSHLNQLQVLILSHN 327
Query: 348 FLRALTQDLITPLKSLQELRLDDN 371
L ++ L +L+EL L N
Sbjct: 328 QLTYISPGAFNGLTNLRELSLHTN 351
Score = 86 (35.3 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L+ L+VL ++HNQ + + GA GL L LS H N + L+ + F ++
Sbjct: 316 LNQLQVLILSHNQLTYISPGAFNGLTNLRELSLHTNALQDLDSNVFRSL 364
Score = 52 (23.4 bits), Expect = 8.9e-18, Sum P(2) = 8.9e-18
Identities = 14/51 (27%), Positives = 24/51 (47%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNVIG 694
L++L+ LS+ N + L L ++S N++ L F+NV G
Sbjct: 340 LTNLRELSLHTNALQDLDSNVFRSLANLQNISLQSNRLRQLPGSIFANVNG 390
>MGI|MGI:1921738 [details] [associations]
symbol:Lrrc15 "leucine rich repeat containing 15"
species:10090 "Mus musculus" [GO:0005622 "intracellular"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1921738 GO:GO:0016021
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104286 CTD:131578 HOGENOM:HOG000040004
HOVERGEN:HBG052343 OMA:NHLEYIP OrthoDB:EOG4QVCCN EMBL:BC050245
IPI:IPI00330681 RefSeq:NP_083249.1 UniGene:Mm.290677
ProteinModelPortal:Q80X72 SMR:Q80X72 STRING:Q80X72
PhosphoSite:Q80X72 PRIDE:Q80X72 Ensembl:ENSMUST00000064606
GeneID:74488 KEGG:mmu:74488 UCSC:uc007ywn.2 InParanoid:Q80X72
NextBio:340930 Bgee:Q80X72 CleanEx:MM_LRRC15 Genevestigator:Q80X72
GermOnline:ENSMUSG00000052316 Uniprot:Q80X72
Length = 579
Score = 257 (95.5 bits), Expect = 7.9e-19, P = 7.9e-19
Identities = 85/268 (31%), Positives = 127/268 (47%)
Query: 105 SNVTVLP-GKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSAL 163
+N+ +P G F V L L + + ++S F L + LQ L L N LS +P
Sbjct: 159 NNLEYIPEGVFDHLVGLTKLNLGNNGFTHLSPRVFQHLGN-LQVLRLYENRLSDIPMGTF 217
Query: 164 APLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRL 223
L NL L L NQ+ L F +L L LS N + L L L L L
Sbjct: 218 DALG-NLQELALQENQIGTLSPGLFHNNRNLQRLYLSNNHISHLPPGIFMQLPHLNKLTL 276
Query: 224 QGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRG 283
GN L + ++ +L L +N + L + L+ L+VL ++HNQ S + G
Sbjct: 277 FGNSLKELSPGVFGPMPNLRELWLYNNHITS-LPDNAFSHLNQLQVLILSHNQLSYISPG 335
Query: 284 ALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLD 343
A GL L LS H N + L+ + FR+L+ L ++ L +NR+ + G+ A+++ L T+
Sbjct: 336 AFNGLTNLRELSLHTNALQDLDGNVFRSLANLRNVSLQNNRLRQLPGSIFANVNGLMTIQ 395
Query: 344 LSHNFLRALTQDLITPLKSLQELRLDDN 371
L +N L L + L +L ELRL DN
Sbjct: 396 LQNNNLENLPLGIFDHLGNLCELRLYDN 423
Score = 238 (88.8 bits), Expect = 3.4e-21, Sum P(2) = 3.4e-21
Identities = 81/299 (27%), Positives = 135/299 (45%)
Query: 96 RVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLL 155
R S ++CT + + +P L I + + + + F+ +S+ L AL + N L
Sbjct: 33 RASQVECTGAQIVAMPSPLPWNAM--SLQILNTHITELPEDKFLNISA-LIALKMEKNEL 89
Query: 156 SVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPL 215
+ + A L +L L L++N+L L F+ +++L L LS N+L+ + +
Sbjct: 90 ANIMPGAFRNLG-SLRHLSLANNKLKNLPVRLFQDVNNLETLLLSNNQLVQIQPAQFSQF 148
Query: 216 VTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHN 275
L+ L+L GN L L +T L+L +N L P L +L+VL + N
Sbjct: 149 SNLKELQLYGNNLEYIPEGVFDHLVGLTKLNLGNNGFTH-LSPRVFQHLGNLQVLRLYEN 207
Query: 276 QFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAH 335
+ S + G L L L+ NQI L F L L L++N I +
Sbjct: 208 RLSDIPMGTFDALGNLQELALQENQIGTLSPGLFHNNRNLQRLYLSNNHISHLPPGIFMQ 267
Query: 336 LSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELIYS 394
L +L L L N L+ L+ + P+ +L+EL L +N I+ P+ + N + + LI S
Sbjct: 268 LPHLNKLTLFGNSLKELSPGVFGPMPNLRELWLYNNHITSLPDNAFSHLNQLQV-LILS 325
Score = 234 (87.4 bits), Expect = 2.7e-16, P = 2.7e-16
Identities = 87/317 (27%), Positives = 143/317 (45%)
Query: 78 KSDLYAISE-SLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVT-LHGLVISSGELKNISD 135
K++L I + R L +SL + L N LP + + V L L++S+ +L I
Sbjct: 86 KNELANIMPGAFRNLGSLRHLSLANNKLKN---LPVRLFQDVNNLETLLLSNNQLVQIQP 142
Query: 136 GAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLN 195
F S+ L+ L L N L +P L L +L+L +N L F+ L +L
Sbjct: 143 AQFSQFSN-LKELQLYGNNLEYIPEGVFDHLV-GLTKLNLGNNGFTHLSPRVFQHLGNLQ 200
Query: 196 FLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGP 255
L L N+L + L L+ L LQ N++ R++ L LS+N ++
Sbjct: 201 VLRLYENRLSDIPMGTFDALGNLQELALQENQIGTLSPGLFHNNRNLQRLYLSNNHISH- 259
Query: 256 LGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTL 315
L P +L L L++ N + G + L L ++N I L D++F L+ L
Sbjct: 260 LPPGIFMQLPHLNKLTLFGNSLKELSPGVFGPMPNLRELWLYNNHITSLPDNAFSHLNQL 319
Query: 316 SHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISM 375
L L+HN++ +S + L+NL L L N L+ L ++ L +L+ + L +N +
Sbjct: 320 QVLILSHNQLSYISPGAFNGLTNLRELSLHTNALQDLDGNVFRSLANLRNVSLQNNRLRQ 379
Query: 376 EPECIYVGFN-TMDLEL 391
P I+ N M ++L
Sbjct: 380 LPGSIFANVNGLMTIQL 396
Score = 88 (36.0 bits), Expect = 3.4e-21, Sum P(2) = 3.4e-21
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L+ L+VL ++HNQ S + GA GL L LS H N + L+ + F ++
Sbjct: 316 LNQLQVLILSHNQLSYISPGAFNGLTNLRELSLHTNALQDLDGNVFRSL 364
Score = 52 (23.4 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 14/51 (27%), Positives = 25/51 (49%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNVIG 694
L++L+ LS+ N + L L ++S +N++ L F+NV G
Sbjct: 340 LTNLRELSLHTNALQDLDGNVFRSLANLRNVSLQNNRLRQLPGSIFANVNG 390
>FB|FBgn0259677 [details] [associations]
symbol:CG42346 species:7227 "Drosophila melanogaster"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR003961 PROSITE:PS51450 SMART:SM00060 Gene3D:2.60.40.10
InterPro:IPR013783 EMBL:AE014298 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082
RefSeq:NP_001036306.2 UniGene:Dm.23593 ProteinModelPortal:Q0KHN6
SMR:Q0KHN6 GeneID:3355160 KEGG:dme:Dmel_CG42346 FlyBase:FBgn0259677
InParanoid:Q0KHN6 OMA:RHFSIPN OrthoDB:EOG40ZPCD PhylomeDB:Q0KHN6
GenomeRNAi:3355160 NextBio:850922 Bgee:Q0KHN6 Uniprot:Q0KHN6
Length = 1639
Score = 260 (96.6 bits), Expect = 6.1e-21, Sum P(2) = 6.1e-21
Identities = 82/316 (25%), Positives = 158/316 (50%)
Query: 93 PDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPN 152
P +S+ D S ++ F GV + L S L+ + D + + S L++L + N
Sbjct: 97 PIHSLSIYDFDRSVTSLSQDVFQPGVHIRHLQFSHSHLEALKDNSLRNVRSSLESLSIVN 156
Query: 153 NLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCL 212
L+ +P+ AL+ + L LD +N++ ++++ SF GL ++ L++ N+L + +
Sbjct: 157 GKLTQMPSRALSSMQ-KLTALDFDYNEIVRVDDYSFYGLR-ISKLNMKGNRLQGMPEHAF 214
Query: 213 APLVT-LRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLA---GPLGPST-------- 260
A L ++ + + N L + AL+ L + L LS+N + G + +T
Sbjct: 215 AGLEECMQEIDVSENGLRTFPLMALRKLDHLRILRLSNNRIPTFYGDIQLATNNASAAAA 274
Query: 261 ---VPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 317
+L SL L ++ NQF+ + +L +LS + NQI++++ +F++L L
Sbjct: 275 AVGAFQLPSLIFLDLSSNQFAEIGPDCFRAFPQLKTLSFYANQIELVQPEAFKSLRELMS 334
Query: 318 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEP 377
LD++HNRI+ + L T+DLSHN + + + + L L+E+ L +N+I P
Sbjct: 335 LDMSHNRIIGLDPKVFEKNKRLQTVDLSHNHIHTIG-GVFSNLPQLREVFLSENNILELP 393
Query: 378 ECIYVGFNTMDLELIY 393
+ N+ ++++IY
Sbjct: 394 ADAFT--NSTNVDVIY 407
Score = 240 (89.5 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 97/338 (28%), Positives = 153/338 (45%)
Query: 62 DLCACDLPHTLRCTANKSDL-YAISESLRGLEPDERVSLLDCTLSNVTV--LPGK-FLEG 117
D+ D+P+ R + ++ YA S + D SL ++SN ++ +P F +
Sbjct: 729 DIQTLDIPNLRRLLLSHNNFSYAGSVGIMAGMLDRLRSLQQLSMSNCSLGQIPDLLFAKN 788
Query: 118 VTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSH 177
L L + L I+ F GL+ + L L N LS P AL L+ L+ LDL+
Sbjct: 789 TNLVRLDLCDNRLTQINRNIFSGLNV-FKELRLCRNELSDFPHIALYNLS-TLESLDLAR 846
Query: 178 NQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQ 237
NQL ++ G +L L L NK+ LS L L + L GN L L+
Sbjct: 847 NQLASIDFFKLSGTLNLRQLILRDNKITALSGFNAVNLTQLDSVDLSGNLLLSLPANFLR 906
Query: 238 GLRSVTDLDLSHN----LLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTS 293
++ + LS+N + + L ++PRLS L + N+ +V+ L +L
Sbjct: 907 HSINLQKVHLSNNRFLQIPSSALSDVSIPRLSWLNLTGNPINRIYTVKEERYPYLKEL-- 964
Query: 294 LSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALT 353
C N + +L F A L HL L +NRI +S + L+NL TLDLS N L L
Sbjct: 965 YICQTN-LSILTSKDFEAFQALQHLHLVNNRITRISPGAFKSLTNLLTLDLSVNELEMLP 1023
Query: 354 QDLITPLKSLQELRLDDNDIS-MEPECI-YVGFNTMDL 389
++ + L+ L+ L + N + +E + + T+DL
Sbjct: 1024 KERLQGLRLLRFLNISHNTLKDLEEFSVDLLEMQTLDL 1061
Score = 223 (83.6 bits), Expect = 6.6e-17, Sum P(2) = 6.6e-17
Identities = 80/300 (26%), Positives = 130/300 (43%)
Query: 89 RGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQAL 148
R L ++++ LD + + + G+ + L + L+ + + AF GL +Q +
Sbjct: 165 RALSSMQKLTALDFDYNEIVRVDDYSFYGLRISKLNMKGNRLQGMPEHAFAGLEECMQEI 224
Query: 149 GLPNNLLSVVPTSALAPLAPNLDRLDLSHNQL---Y---KL--ENTSFKG-------LSS 193
+ N L P AL L +L L LS+N++ Y +L N S L S
Sbjct: 225 DVSENGLRTFPLMALRKL-DHLRILRLSNNRIPTFYGDIQLATNNASAAAAAVGAFQLPS 283
Query: 194 LNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLA 253
L FLDLS N+ + DC L+ L N++ + A + LR + LD+SHN +
Sbjct: 284 LIFLDLSSNQFAEIGPDCFRAFPQLKTLSFYANQIELVQPEAFKSLRELMSLDMSHNRII 343
Query: 254 GPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALS 313
G L P + L+ + ++HN ++ G + L +L + N I L +F +
Sbjct: 344 G-LDPKVFEKNKRLQTVDLSHNHIHTIG-GVFSNLPQLREVFLSENNILELPADAFTNST 401
Query: 314 TLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 373
+ + L N I + + L NL L L NF+ L L L L LD+N+I
Sbjct: 402 NVDVIYLESNAIAHIDPNVFSTLVNLDHLYLRSNFIPLLPVTLFDKSTKLTSLSLDNNEI 461
Score = 215 (80.7 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 77/271 (28%), Positives = 124/271 (45%)
Query: 105 SNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALA 164
+ +T L G +T V SG L F+ S LQ + L NN +P+SAL+
Sbjct: 871 NKITALSGFNAVNLTQLDSVDLSGNLLLSLPANFLRHSINLQKVHLSNNRFLQIPSSALS 930
Query: 165 PLA-PNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRL 223
++ P L L+L+ N + ++ + L L + L L+ L+ L L
Sbjct: 931 DVSIPRLSWLNLTGNPINRIYTVKEERYPYLKELYICQTNLSILTSKDFEAFQALQHLHL 990
Query: 224 QGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRG 283
NR+T A + L ++ LDLS N L L + L L+ L+I+HN +
Sbjct: 991 VNNRITRISPGAFKSLTNLLTLDLSVNELE-MLPKERLQGLRLLRFLNISHNTLKDLEEF 1049
Query: 284 ALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLD 343
++ L+ T L NQ+D + +FR L L L L NR+ +S + L L LD
Sbjct: 1050 SVDLLEMQT-LDLSFNQLDRISKKTFRNLHGLLELFLMGNRMTVLSNDAFRFLRKLHVLD 1108
Query: 344 LSHNFLRALTQDLITPLKS-LQELRLDDNDI 373
L N+ + + + PL++ L+ LRL++N +
Sbjct: 1109 LRKNYFELVPLEPLRPLETNLRTLRLEENPL 1139
Score = 209 (78.6 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 82/312 (26%), Positives = 135/312 (43%)
Query: 69 PHTLRCTANKSDLYAISESLRGLEP---DERVSLLDCTLSNVTVLP---GKFLEGVTLHG 122
P+ N LY S + L D+ L +L N + G F + L
Sbjct: 418 PNVFSTLVNLDHLYLRSNFIPLLPVTLFDKSTKLTSLSLDNNEIQDLEIGMFRKLEHLRE 477
Query: 123 LVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYK 182
+ + + ++ + G F L S LQ L + N + + A L N+ ++L NQL
Sbjct: 478 VRLHNNRIRRVRRGVFEPLPS-LQELHIQKNSIEDIEPQAFHTLE-NMQHINLQDNQLTV 535
Query: 183 LENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSV 242
LE+ SSL + L N L + + ++++ L+ N+LT + +
Sbjct: 536 LEDIFPDENSSLLSVQLEANYLHKVHPRTFSRQQKVQIMWLKDNQLTRVERSFFADTPQL 595
Query: 243 TDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID 302
L LS N + + T L L+ L ++ NQ +RR A L L LS N I+
Sbjct: 596 GRLYLSDNKIRD-IEKDTFVNLLLLQFLDLSGNQLRQLRRDYFAPLQDLEELSLARNHIE 654
Query: 303 VLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKS 362
+E ++F L L LDL+HN +V ++ ++ L +L+L + LR L Q L +
Sbjct: 655 AIEGYAFAKLKNLKSLDLSHNPLVQLTRDIFSNEFPLNSLNLGNCSLRKLEQHAFKSLTN 714
Query: 363 LQELRLDDNDIS 374
L EL L+ N ++
Sbjct: 715 LNELNLERNQLN 726
Score = 180 (68.4 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 68/253 (26%), Positives = 108/253 (42%)
Query: 123 LVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYK 182
L +SS + I F L+ L N + +V A L L LD+SHN++
Sbjct: 287 LDLSSNQFAEIGPDCFRAFPQ-LKTLSFYANQIELVQPEAFKSLR-ELMSLDMSHNRIIG 344
Query: 183 LENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSV 242
L+ F+ L +DLS+N + T+ + L LR + L N + A +V
Sbjct: 345 LDPKVFEKNKRLQTVDLSHNHIHTIG-GVFSNLPQLREVFLSENNILELPADAFTNSTNV 403
Query: 243 TDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID 302
+ L N +A + P+ L +L L + N + KLTSLS +N+I
Sbjct: 404 DVIYLESNAIAH-IDPNVFSTLVNLDHLYLRSNFIPLLPVTLFDKSTKLTSLSLDNNEIQ 462
Query: 303 VLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKS 362
LE FR L L + L +NRI V L +L L + N + + L++
Sbjct: 463 DLEIGMFRKLEHLREVRLHNNRIRRVRRGVFEPLPSLQELHIQKNSIEDIEPQAFHTLEN 522
Query: 363 LQELRLDDNDISM 375
+Q + L DN +++
Sbjct: 523 MQHINLQDNQLTV 535
Score = 176 (67.0 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 68/269 (25%), Positives = 128/269 (47%)
Query: 115 LEG-VTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRL 173
L G + L L++ ++ +S + L+ L ++ L NLL +P + L + NL ++
Sbjct: 857 LSGTLNLRQLILRDNKITALSGFNAVNLTQ-LDSVDLSGNLLLSLPANFLRH-SINLQKV 914
Query: 174 DLSHNQLYKLENTSFKGLS--SLNFLDLS---YNKLMTLSQDCLAPLVTLRVLRLQGNRL 228
LS+N+ ++ +++ +S L++L+L+ N++ T+ ++ L L + + + L
Sbjct: 915 HLSNNRFLQIPSSALSDVSIPRLSWLNLTGNPINRIYTVKEERYPYLKELYICQTNLSIL 974
Query: 229 TVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGL 288
T A Q L+ L L +N + + P L++L L ++ N+ + + L GL
Sbjct: 975 TSKDFEAFQALQH---LHLVNNRITR-ISPGAFKSLTNLLTLDLSVNELEMLPKERLQGL 1030
Query: 289 DKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNF 348
L L+ HN + LE+ S L + LDL+ N++ +S + +L L L L N
Sbjct: 1031 RLLRFLNISHNTLKDLEEFSVDLLE-MQTLDLSFNQLDRISKKTFRNLHGLLELFLMGNR 1089
Query: 349 LRALTQDLITPLKSLQELRLDDNDISMEP 377
+ L+ D L+ L L L N + P
Sbjct: 1090 MTVLSNDAFRFLRKLHVLDLRKNYFELVP 1118
Score = 163 (62.4 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 74/285 (25%), Positives = 126/285 (44%)
Query: 93 PDERVSLLDCTLSNVTVLPG-KFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLP 151
P + + L +++ + G F + L L +S L ++ F PL +L L
Sbjct: 639 PLQDLEELSLARNHIEAIEGYAFAKLKNLKSLDLSHNPLVQLTRDIFSN-EFPLNSLNLG 697
Query: 152 NNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTL-SQD 210
N L + A L NL+ L+L NQL + + + +L L LS+N S
Sbjct: 698 NCSLRKLEQHAFKSLT-NLNELNLERNQLNPADIQTLD-IPNLRRLLLSHNNFSYAGSVG 755
Query: 211 CLAPLVT-LRVLR-LQGNRLTVSVVAALQGLRS--VTDLDLSHNLLAGPLGPSTVPRLSS 266
+A ++ LR L+ L + ++ + L ++ + LDL N L + + L+
Sbjct: 756 IMAGMLDRLRSLQQLSMSNCSLGQIPDLLFAKNTNLVRLDLCDNRLT-QINRNIFSGLNV 814
Query: 267 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 326
K L + N+ S AL L L SL NQ+ ++ L L L N+I
Sbjct: 815 FKELRLCRNELSDFPHIALYNLSTLESLDLARNQLASIDFFKLSGTLNLRQLILRDNKIT 874
Query: 327 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
A+SG + +L+ L ++DLS N L +L + + +LQ++ L +N
Sbjct: 875 ALSGFNAVNLTQLDSVDLSGNLLLSLPANFLRHSINLQKVHLSNN 919
Score = 76 (31.8 bits), Expect = 6.1e-21, Sum P(2) = 6.1e-21
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 630 SDSRYVKLQATTIL-LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHS 688
SD++ ++ T + L L+ L ++ NQ +RR A L L LS N I+ +E ++
Sbjct: 601 SDNKIRDIEKDTFVNLLLLQFLDLSGNQLRQLRRDYFAPLQDLEELSLARNHIEAIEGYA 660
Query: 689 FSNV 692
F+ +
Sbjct: 661 FAKL 664
Score = 68 (29.0 bits), Expect = 4.1e-20, Sum P(2) = 4.1e-20
Identities = 18/48 (37%), Positives = 23/48 (47%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSN 691
L L+ LS+A N ++ A A L L SL HN + L FSN
Sbjct: 640 LQDLEELSLARNHIEAIEGYAFAKLKNLKSLDLSHNPLVQLTRDIFSN 687
Score = 59 (25.8 bits), Expect = 3.6e-19, Sum P(2) = 3.6e-19
Identities = 14/46 (30%), Positives = 22/46 (47%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
L L+ + + +N+ VRRG L L L N I+ +E +F
Sbjct: 472 LEHLREVRLHNNRIRRVRRGVFEPLPSLQELHIQKNSIEDIEPQAF 517
Score = 59 (25.8 bits), Expect = 3.6e-19, Sum P(2) = 3.6e-19
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L +LK L ++HN + R + L SL+ + + LE H+F ++
Sbjct: 664 LKNLKSLDLSHNPLVQLTRDIFSNEFPLNSLNLGNCSLRKLEQHAFKSL 712
Score = 58 (25.5 bits), Expect = 4.6e-19, Sum P(2) = 4.6e-19
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLED 686
L SL+ L I N + A L+ + ++ NQ+ VLED
Sbjct: 496 LPSLQELHIQKNSIEDIEPQAFHTLENMQHINLQDNQLTVLED 538
Score = 57 (25.1 bits), Expect = 5.8e-19, Sum P(2) = 5.8e-19
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
LS+L+ L +A NQ +S+ L+G L L N+I L + N+
Sbjct: 836 LSTLESLDLARNQLASIDFFKLSGTLNLRQLILRDNKITALSGFNAVNL 884
Score = 55 (24.4 bits), Expect = 9.4e-19, Sum P(2) = 9.4e-19
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHS 688
L++L L ++ N+ + + L GL L L+ HN + LE+ S
Sbjct: 1006 LTNLLTLDLSVNELEMLPKERLQGLRLLRFLNISHNTLKDLEEFS 1050
Score = 55 (24.4 bits), Expect = 9.4e-19, Sum P(2) = 9.4e-19
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNVIG 694
L L+ L+I+HN + ++ L+ T L NQ+D + +F N+ G
Sbjct: 1030 LRLLRFLNISHNTLKDLEEFSVDLLEMQT-LDLSFNQLDRISKKTFRNLHG 1079
Score = 55 (24.4 bits), Expect = 9.4e-19, Sum P(2) = 9.4e-19
Identities = 14/52 (26%), Positives = 26/52 (50%)
Query: 632 SRYVKLQATTILLSSLKV--LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
S ++ L T+ S K+ LS+ +N+ + G L+ L + H+N+I
Sbjct: 434 SNFIPLLPVTLFDKSTKLTSLSLDNNEIQDLEIGMFRKLEHLREVRLHNNRI 485
Score = 54 (24.1 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 641 TILLSSLKVLSIAHNQFSSVRR-GALAG-LDKLTSL 674
T+ + +L+ L ++HN FS G +AG LD+L SL
Sbjct: 732 TLDIPNLRRLLLSHNNFSYAGSVGIMAGMLDRLRSL 767
Score = 50 (22.7 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 14/62 (22%), Positives = 28/62 (45%)
Query: 628 NNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDH 687
N S + L+ ++ L ++ L ++ NQ + + L L L N++ VL +
Sbjct: 1037 NISHNTLKDLEEFSVDLLEMQTLDLSFNQLDRISKKTFRNLHGLLELFLMGNRMTVLSND 1096
Query: 688 SF 689
+F
Sbjct: 1097 AF 1098
Score = 49 (22.3 bits), Expect = 3.9e-18, Sum P(2) = 3.9e-18
Identities = 12/47 (25%), Positives = 24/47 (51%)
Query: 647 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNVI 693
++++ + NQ + V R A +L L N+I +E +F N++
Sbjct: 571 VQIMWLKDNQLTRVERSFFADTPQLGRLYLSDNKIRDIEKDTFVNLL 617
Score = 49 (22.3 bits), Expect = 3.9e-18, Sum P(2) = 3.9e-18
Identities = 16/64 (25%), Positives = 26/64 (40%)
Query: 631 DSRYVKLQATTIL-LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
D+R ++ L+ K L + N+ S AL L L SL NQ+ ++
Sbjct: 798 DNRLTQINRNIFSGLNVFKELRLCRNELSDFPHIALYNLSTLESLDLARNQLASIDFFKL 857
Query: 690 SNVI 693
S +
Sbjct: 858 SGTL 861
Score = 43 (20.2 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 10/16 (62%), Positives = 12/16 (75%)
Query: 670 KLTSLSCHHNQIDVLE 685
KLTSLS +N+I LE
Sbjct: 450 KLTSLSLDNNEIQDLE 465
Score = 39 (18.8 bits), Expect = 4.3e-17, Sum P(2) = 4.3e-17
Identities = 8/37 (21%), Positives = 18/37 (48%)
Query: 645 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
++L L + N+ + + R +GL+ L N++
Sbjct: 789 TNLVRLDLCDNRLTQINRNIFSGLNVFKELRLCRNEL 825
>UNIPROTKB|F1SRC2 [details] [associations]
symbol:CHADL "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031012 "extracellular matrix" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 OMA:ICDNSRR GeneTree:ENSGT00700000104286
EMBL:CU407312 Ensembl:ENSSSCT00000000073 Uniprot:F1SRC2
Length = 757
Score = 259 (96.2 bits), Expect = 3.7e-20, Sum P(2) = 3.7e-20
Identities = 77/228 (33%), Positives = 105/228 (46%)
Query: 146 QALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLM 205
Q L L N+L V+P +A L P L LDL H Q+ + +F+GL L L+L+ N+L
Sbjct: 62 QRLDLRGNVLRVIPPAAFQDL-PYLTHLDLRHCQVELVAEGAFRGLGRLLLLNLASNRLS 120
Query: 206 TLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLS 265
L Q+ L L +LR L L+GN L L ++ L+L+HN L L P L
Sbjct: 121 ALPQEALDGLGSLRRLELEGNLLEELRPGTFGALGALATLNLAHNALVY-LPPMAFQGLV 179
Query: 266 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 325
+ L ++HN S + ALAGL L LS HHN++ L + L+ L+L HN
Sbjct: 180 RARWLQLSHNALSVLAPEALAGLPALRRLSLHHNELQSLPGLALSQARGLARLELGHNPF 239
Query: 326 VAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 373
L L L L H L+AL L L L N +
Sbjct: 240 TYAGEEDGLALPGLRELRLEHGALQALDPRAFAHCPRLHTLDLRGNQL 287
Score = 237 (88.5 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 74/227 (32%), Positives = 110/227 (48%)
Query: 168 PNL-DRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGN 226
P L RLDL N L + +F+ L L LDL + ++ +++ L L +L L N
Sbjct: 58 PELTQRLDLRGNVLRVIPPAAFQDLPYLTHLDLRHCQVELVAEGAFRGLGRLLLLNLASN 117
Query: 227 RLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALA 286
RL+ AL GL S+ L+L NLL L P T L +L L++AHN + A
Sbjct: 118 RLSALPQEALDGLGSLRRLELEGNLLE-ELRPGTFGALGALATLNLAHNALVYLPPMAFQ 176
Query: 287 GLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSH 346
GL + L HN + VL + L L L L HN + ++ G +L+ L L+L H
Sbjct: 177 GLVRARWLQLSHNALSVLAPEALAGLPALRRLSLHHNELQSLPGLALSQARGLARLELGH 236
Query: 347 N-FLRALTQDLITPLKSLQELRLDDNDI-SMEPECIY--VGFNTMDL 389
N F A +D + L L+ELRL+ + +++P +T+DL
Sbjct: 237 NPFTYAGEEDGLA-LPGLRELRLEHGALQALDPRAFAHCPRLHTLDL 282
Score = 209 (78.6 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 82/251 (32%), Positives = 107/251 (42%)
Query: 102 CTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTS 161
C N+T +P E +T L + L+ I AF L L L L + + +V
Sbjct: 45 CRHQNLTEVPNAIPE-LTQR-LDLRGNVLRVIPPAAFQDLPY-LTHLDLRHCQVELVAEG 101
Query: 162 ALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVL 221
A L L L+L+ N+L L + GL SL L+L N L L L L L
Sbjct: 102 AFRGLG-RLLLLNLASNRLSALPQEALDGLGSLRRLELEGNLLEELRPGTFGALGALATL 160
Query: 222 RLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVR 281
L N L A QGL L LSHN L+ L P + L +L+ LS+ HN+ S+
Sbjct: 161 NLAHNALVYLPPMAFQGLVRARWLQLSHNALS-VLAPEALAGLPALRRLSLHHNELQSLP 219
Query: 282 RGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTT 341
AL+ L L HN + AL L L L H + A+ + AH L T
Sbjct: 220 GLALSQARGLARLELGHNPFTYAGEEDGLALPGLRELRLEHGALQALDPRAFAHCPRLHT 279
Query: 342 LDLSHNFLRAL 352
LDL N L AL
Sbjct: 280 LDLRGNQLDAL 290
Score = 173 (66.0 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 70/240 (29%), Positives = 103/240 (42%)
Query: 140 GLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDL 199
G + Q L L N +VP +A L L L L H + +LE + GL SL +L L
Sbjct: 415 GFPNDTQLLDLRRNHFPLVPRAAFQGLG-RLVSLHLQHCGITELEAGALAGLGSLIYLYL 473
Query: 200 SYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPS 259
S N L LS L L L L+ NR AAL L S+ L L N + L P
Sbjct: 474 SDNGLSGLSATALEGAPRLGYLYLERNRFLQVPGAALGALPSLFSLHLQDNAV-DRLAPG 532
Query: 260 TVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 319
+ +L+ L ++ N+ + V GAL +L L NQ+ + + L L L
Sbjct: 533 DLAGGRALRWLYLSGNRLTQVSPGALGPAQELEKLHLDRNQLPEVPTEALEGLPALLELQ 592
Query: 320 LAHNRIVAVSGASLAHLS-NLTTLDLSHNFLRALTQDLITPL-KSLQELRLDDNDISMEP 377
L+ N + A+ + + +L L L+ + L ++ + L LQ L L N + P
Sbjct: 593 LSGNPLRALQEGAFRPVGRSLQHLFLNSSGLEQISPGAFSGLGPQLQSLYLQKNQLQALP 652
Score = 161 (61.7 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 69/219 (31%), Positives = 98/219 (44%)
Query: 107 VTVLPGKFLEGV-TLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAP 165
+T L L G+ +L L +S L +S A G + L L L N VP +AL
Sbjct: 454 ITELEAGALAGLGSLIYLYLSDNGLSGLSATALEG-APRLGYLYLERNRFLQVPGAALGA 512
Query: 166 LAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQG 225
L P+L L L N + +L G +L +L LS N+L +S L P L L L
Sbjct: 513 L-PSLFSLHLQDNAVDRLAPGDLAGGRALRWLYLSGNRLTQVSPGALGPAQELEKLHLDR 571
Query: 226 NRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGAL 285
N+L AL+GL ++ +L LS N L + P SL+ L + + + GA
Sbjct: 572 NQLPEVPTEALEGLPALLELQLSGNPLRALQEGAFRPVGRSLQHLFLNSSGLEQISPGAF 631
Query: 286 AGLD-KLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 323
+GL +L SL NQ+ L L L +DL+ N
Sbjct: 632 SGLGPQLQSLYLQKNQLQALPP--LPGLRQLELIDLSGN 668
Score = 150 (57.9 bits), Expect = 2.4e-14, Sum P(3) = 2.4e-14
Identities = 64/219 (29%), Positives = 94/219 (42%)
Query: 67 DLPHTLRCTANKSDLYAISE-SLRGLEPDERVSLLDCTLSNVTVLPGKFLEGV-TLHGLV 124
DLP+ + ++E + RGL R+ LL+ + ++ LP + L+G+ +L L
Sbjct: 81 DLPYLTHLDLRHCQVELVAEGAFRGLG---RLLLLNLASNRLSALPQEALDGLGSLRRLE 137
Query: 125 ISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLE 184
+ L+ + G F G L L L +N L +P A L L LSHN L L
Sbjct: 138 LEGNLLEELRPGTF-GALGALATLNLAHNALVYLPPMAFQGLV-RARWLQLSHNALSVLA 195
Query: 185 NTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVA---ALQGLRS 241
+ GL +L L L +N+L +L L+ L L L N T + AL GLR
Sbjct: 196 PEALAGLPALRRLSLHHNELQSLPGLALSQARGLARLELGHNPFTYAGEEDGLALPGLR- 254
Query: 242 VTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSV 280
+L L H L L P L L + NQ ++
Sbjct: 255 --ELRLEHGALQA-LDPRAFAHCPRLHTLDLRGNQLDAL 290
Score = 147 (56.8 bits), Expect = 9.7e-10, Sum P(2) = 9.7e-10
Identities = 62/202 (30%), Positives = 84/202 (41%)
Query: 197 LDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPL 256
LDL N + + L L L LQ +T AL GL S+ L LS N L+G L
Sbjct: 423 LDLRRNHFPLVPRAAFQGLGRLVSLHLQHCGITELEAGALAGLGSLIYLYLSDNGLSG-L 481
Query: 257 GPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLS 316
+ + L L + N+F V AL L L SL N +D L L
Sbjct: 482 SATALEGAPRLGYLYLERNRFLQVPGAALGALPSLFSLHLQDNAVDRLAPGDLAGGRALR 541
Query: 317 HLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISME 376
L L+ NR+ VS +L L L L N L + + + L +L EL+L N +
Sbjct: 542 WLYLSGNRLTQVSPGALGPAQELEKLHLDRNQLPEVPTEALEGLPALLELQLSGNPLRAL 601
Query: 377 PECIY--VGFNTMDLELIYSGV 396
E + VG + L L SG+
Sbjct: 602 QEGAFRPVGRSLQHLFLNSSGL 623
Score = 122 (48.0 bits), Expect = 2.6e-11, Sum P(3) = 2.6e-11
Identities = 58/182 (31%), Positives = 76/182 (41%)
Query: 86 ESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPL 145
E+L GL R+ L L + PG F L L ++ L + AF GL
Sbjct: 125 EALDGLGSLRRLELEGNLLEELR--PGTFGALGALATLNLAHNALVYLPPMAFQGLVRA- 181
Query: 146 QALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLM 205
+ L L +N LSV+ ALA L P L RL L HN+L L + L L+L +N
Sbjct: 182 RWLQLSHNALSVLAPEALAGL-PALRRLSLHHNELQSLPGLALSQARGLARLELGHNPFT 240
Query: 206 TLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAG---PLGPSTVP 262
++ L LR LRL+ L A + LDL N L P GP +
Sbjct: 241 YAGEEDGLALPGLRELRLEHGALQALDPRAFAHCPRLHTLDLRGNQLDALLPPQGPGQLR 300
Query: 263 RL 264
RL
Sbjct: 301 RL 302
Score = 111 (44.1 bits), Expect = 2.4e-14, Sum P(3) = 2.4e-14
Identities = 37/119 (31%), Positives = 52/119 (43%)
Query: 257 GPSTVPR--LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALST 314
G VPR + ++L + N F V R A GL +L SL H I LE + L +
Sbjct: 408 GLRAVPRGFPNDTQLLDLRRNHFPLVPRAAFQGLGRLVSLHLQHCGITELEAGALAGLGS 467
Query: 315 LSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 373
L +L L+ N + +S +L L L L N + + L SL L L DN +
Sbjct: 468 LIYLYLSDNGLSGLSATALEGAPRLGYLYLERNRFLQVPGAALGALPSLFSLHLQDNAV 526
Score = 78 (32.5 bits), Expect = 9.7e-10, Sum P(2) = 9.7e-10
Identities = 41/135 (30%), Positives = 60/135 (44%)
Query: 96 RVSLLDCTLSNVTVLPGKFLEGV-TLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNL 154
R L + + ++VL + L G+ L L + EL+++ G + + L L L +N
Sbjct: 180 RARWLQLSHNALSVLAPEALAGLPALRRLSLHHNELQSLP-GLALSQARGLARLELGHNP 238
Query: 155 LSVV-PTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLA 213
+ LA P L L L H L L+ +F L+ LDL N+L L
Sbjct: 239 FTYAGEEDGLA--LPGLRELRLEHGALQALDPRAFAHCPRLHTLDLRGNQLDALLPP-QG 295
Query: 214 PLVTLRVLRLQGNRL 228
P LR L+LQGN L
Sbjct: 296 P-GQLRRLQLQGNPL 309
Score = 60 (26.2 bits), Expect = 3.7e-20, Sum P(2) = 3.7e-20
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 648 KVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLE 685
++L + N F V R A GL +L SL H I LE
Sbjct: 421 QLLDLRRNHFPLVPRAAFQGLGRLVSLHLQHCGITELE 458
Score = 52 (23.4 bits), Expect = 2.5e-19, Sum P(2) = 2.5e-19
Identities = 15/46 (32%), Positives = 21/46 (45%)
Query: 647 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L+ L + NQ V AL GL L L N + L++ +F V
Sbjct: 564 LEKLHLDRNQLPEVPTEALEGLPALLELQLSGNPLRALQEGAFRPV 609
Score = 52 (23.4 bits), Expect = 2.5e-19, Sum P(2) = 2.5e-19
Identities = 19/56 (33%), Positives = 24/56 (42%)
Query: 630 SDSRYVKLQATTIL-LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL 684
SD+ L AT + L L + N+F V AL L L SL N +D L
Sbjct: 474 SDNGLSGLSATALEGAPRLGYLYLERNRFLQVPGAALGALPSLFSLHLQDNAVDRL 529
Score = 45 (20.9 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 646 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
+L+ L ++ N+ + V GAL +L L NQ+
Sbjct: 539 ALRWLYLSGNRLTQVSPGALGPAQELEKLHLDRNQL 574
Score = 45 (20.9 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL 684
L L L + H + + GALAGL L L N + L
Sbjct: 441 LGRLVSLHLQHCGITELEAGALAGLGSLIYLYLSDNGLSGL 481
>UNIPROTKB|P22792 [details] [associations]
symbol:CPN2 "Carboxypeptidase N subunit 2" species:9606
"Homo sapiens" [GO:0050821 "protein stabilization" evidence=NAS]
[GO:0005576 "extracellular region" evidence=NAS] [GO:0030234
"enzyme regulator activity" evidence=NAS] [GO:0050790 "regulation
of catalytic activity" evidence=NAS] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0030234 GO:GO:0005576
GO:GO:0050821 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 CTD:1370 InterPro:IPR000372
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 EMBL:AC125362
EMBL:J05158 EMBL:AC174158 EMBL:BC031569 EMBL:BC042334 EMBL:BC137398
EMBL:BC137403 IPI:IPI00479116 PIR:A34901 RefSeq:NP_001073982.2
UniGene:Hs.528368 ProteinModelPortal:P22792 SMR:P22792
STRING:P22792 DMDM:52788240 PaxDb:P22792 PRIDE:P22792
Ensembl:ENST00000323830 Ensembl:ENST00000429275 GeneID:1370
KEGG:hsa:1370 UCSC:uc003fts.3 GeneCards:GC03M194060
H-InvDB:HIX0030813 HGNC:HGNC:2313 HPA:HPA004732 MIM:603104
neXtProt:NX_P22792 PharmGKB:PA26830 HOGENOM:HOG000294123
HOVERGEN:HBG050814 InParanoid:P22792 KO:K13023 OMA:WQCDCHL
OrthoDB:EOG4WM4TF BindingDB:P22792 ChEMBL:CHEMBL3685
GenomeRNAi:1370 NextBio:5553 Bgee:P22792 CleanEx:HS_CPN2
Genevestigator:P22792 GermOnline:ENSG00000178772 Uniprot:P22792
Length = 545
Score = 260 (96.6 bits), Expect = 7.4e-20, Sum P(2) = 7.4e-20
Identities = 81/270 (30%), Positives = 126/270 (46%)
Query: 120 LHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQ 179
L L ++ N+S F L+S L L L N+L +P LA L+ L L NQ
Sbjct: 99 LEDLEVTGSSFLNLSTNIFSNLTS-LGKLTLNFNMLEALPEGLFQHLAA-LESLHLQGNQ 156
Query: 180 LYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGL 239
L L F+ L+ L L+L+ N L L ++ PL +L+ L+L N L+ L
Sbjct: 157 LQALPRRLFQPLTHLKTLNLAQNLLAQLPEELFHPLTSLQTLKLSNNALSGLPQGVFGKL 216
Query: 240 RSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 299
S+ +L L N ++ L P +L L+ L + N + + A L LT LS N
Sbjct: 217 GSLQELFLDSNNIS-ELPPQVFSQLFCLERLWLQRNAITHLPLSIFASLGNLTFLSLQWN 275
Query: 300 QIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITP 359
+ VL F L L L HN++ V+ + AHLSNL +L LS+N + L +
Sbjct: 276 MLRVLPAGLFAHTPCLVGLSLTHNQLETVAEGTFAHLSNLRSLMLSYNAITHLPAGIFRD 335
Query: 360 LKSLQELRLDDNDISMEPECIYVGFNTMDL 389
L+ L +L L N+++ ++ + ++L
Sbjct: 336 LEELVKLYLGSNNLTALHPALFQNLSKLEL 365
Score = 233 (87.1 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 89/287 (31%), Positives = 120/287 (41%)
Query: 100 LDCTLSNVTVLP-GKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVV 158
L + + LP G F L L + +L+ + F L+ L+ L L NLL+ +
Sbjct: 126 LTLNFNMLEALPEGLFQHLAALESLHLQGNQLQALPRRLFQPLTH-LKTLNLAQNLLAQL 184
Query: 159 PTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTL 218
P PL +L L LS+N L L F L SL L L N + L + L L
Sbjct: 185 PEELFHPLT-SLQTLKLSNNALSGLPQGVFGKLGSLQELFLDSNNISELPPQVFSQLFCL 243
Query: 219 RVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFS 278
L LQ N +T ++ L ++T L L N+L L L LS+ HNQ
Sbjct: 244 ERLWLQRNAITHLPLSIFASLGNLTFLSLQWNMLR-VLPAGLFAHTPCLVGLSLTHNQLE 302
Query: 279 SVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSN 338
+V G A L L SL +N I L FR L L L L N + A+ A +LS
Sbjct: 303 TVAEGTFAHLSNLRSLMLSYNAITHLPAGIFRDLEELVKLYLGSNNLTALHPALFQNLSK 362
Query: 339 LTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFN 385
L L LS N L L + + +L L L N + Y+ FN
Sbjct: 363 LELLSLSKNQLTTLPEGIFDTNYNLFNLALHGNPWQCDCHLAYL-FN 408
Score = 220 (82.5 bits), Expect = 6.0e-16, Sum P(2) = 6.0e-16
Identities = 71/230 (30%), Positives = 97/230 (42%)
Query: 168 PNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNR 227
P L+ L+++ + L F L+SL L L++N L L + L L L LQGN+
Sbjct: 97 PRLEDLEVTGSSFLNLSTNIFSNLTSLGKLTLNFNMLEALPEGLFQHLAALESLHLQGNQ 156
Query: 228 LTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAG 287
L Q L + L+L+ NLLA L L+SL+ L +++N S + +G
Sbjct: 157 LQALPRRLFQPLTHLKTLNLAQNLLA-QLPEELFHPLTSLQTLKLSNNALSGLPQGVFGK 215
Query: 288 LDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHN 347
L L L N I L F L L L L N I + + A L NLT L L N
Sbjct: 216 LGSLQELFLDSNNISELPPQVFSQLFCLERLWLQRNAITHLPLSIFASLGNLTFLSLQWN 275
Query: 348 FLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGF-NTMDLELIYSGV 396
LR L L L L L N + E + N L L Y+ +
Sbjct: 276 MLRVLPAGLFAHTPCLVGLSLTHNQLETVAEGTFAHLSNLRSLMLSYNAI 325
Score = 163 (62.4 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 63/232 (27%), Positives = 108/232 (46%)
Query: 235 ALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSL 294
A GL + DL+++ + L + L+SL L++ N ++ G L L SL
Sbjct: 92 AFGGLPRLEDLEVTGSSFLN-LSTNIFSNLTSLGKLTLNFNMLEALPEGLFQHLAALESL 150
Query: 295 SCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAH-LSNLTTLDLSHNFLRALT 353
NQ+ L F+ L+ L L+LA N ++A L H L++L TL LS+N L L
Sbjct: 151 HLQGNQLQALPRRLFQPLTHLKTLNLAQN-LLAQLPEELFHPLTSLQTLKLSNNALSGLP 209
Query: 354 QDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELIYSGVWRHSTLLIPVMLSLCTR 413
Q + L SLQEL LD N+IS P ++ ++ + H L + + SL
Sbjct: 210 QGVFGKLGSLQELFLDSNNISELPPQVFSQLFCLERLWLQRNAITH--LPLSIFASLGNL 267
Query: 414 SSVVTRYRYCVVLIEGSNILDQSALVLGCSEILALVPTLTSQPLSYVTSLRA 465
+ + ++ VL G + + ++G S + T+ +++++LR+
Sbjct: 268 TFLSLQWNMLRVLPAG--LFAHTPCLVGLSLTHNQLETVAEGTFAHLSNLRS 317
Score = 133 (51.9 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 60/263 (22%), Positives = 107/263 (40%)
Query: 155 LSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAP 214
L+ VP + P N+ ++ S L S L+ + FL+ +L D
Sbjct: 40 LATVPLD-IPPYTKNIIFVETSFTTLETRAFGSNPNLTKVVFLN---TQLCQFRPDAFGG 95
Query: 215 LVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAH 274
L L L + G+ L S+ L L+ N+L L L++L+ L +
Sbjct: 96 LPRLEDLEVTGSSFLNLSTNIFSNLTSLGKLTLNFNMLEA-LPEGLFQHLAALESLHLQG 154
Query: 275 NQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLA 334
NQ ++ R L L +L+ N + L + F L++L L L++N + +
Sbjct: 155 NQLQALPRRLFQPLTHLKTLNLAQNLLAQLPEELFHPLTSLQTLKLSNNALSGLPQGVFG 214
Query: 335 HLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMD------ 388
L +L L L N + L + + L L+ L L N I+ P I+ +
Sbjct: 215 KLGSLQELFLDSNNISELPPQVFSQLFCLERLWLQRNAITHLPLSIFASLGNLTFLSLQW 274
Query: 389 --LELIYSGVWRHSTLLIPVMLS 409
L ++ +G++ H+ L+ + L+
Sbjct: 275 NMLRVLPAGLFAHTPCLVGLSLT 297
Score = 64 (27.6 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 14/32 (43%), Positives = 17/32 (53%)
Query: 650 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
LS+ HNQ +V G A L L SL +N I
Sbjct: 294 LSLTHNQLETVAEGTFAHLSNLRSLMLSYNAI 325
Score = 56 (24.8 bits), Expect = 6.0e-16, Sum P(2) = 6.0e-16
Identities = 14/55 (25%), Positives = 26/55 (47%)
Query: 638 QATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
+ T LS+L+ L +++N + + G L++L L N + L F N+
Sbjct: 306 EGTFAHLSNLRSLMLSYNAITHLPAGIFRDLEELVKLYLGSNNLTALHPALFQNL 360
Score = 50 (22.7 bits), Expect = 7.4e-20, Sum P(2) = 7.4e-20
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 679
LS L++LS++ NQ +++ G L +L+ H N
Sbjct: 360 LSKLELLSLSKNQLTTLPEGIFDTNYNLFNLALHGN 395
Score = 46 (21.3 bits), Expect = 6.6e-15, Sum P(2) = 6.6e-15
Identities = 13/46 (28%), Positives = 19/46 (41%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
L L L + N +++ L KL LS NQ+ L + F
Sbjct: 336 LEELVKLYLGSNNLTALHPALFQNLSKLELLSLSKNQLTTLPEGIF 381
>FB|FBgn0029114 [details] [associations]
symbol:Tollo "Tollo" species:7227 "Drosophila melanogaster"
[GO:0005886 "plasma membrane" evidence=ISS] [GO:0004888
"transmembrane signaling receptor activity" evidence=IEA;ISS]
[GO:0007165 "signal transduction" evidence=ISS] [GO:0006952
"defense response" evidence=NAS] [GO:0016021 "integral to membrane"
evidence=ISS] [GO:0007352 "zygotic specification of dorsal/ventral
axis" evidence=IEA] [GO:0006963 "positive regulation of
antibacterial peptide biosynthetic process" evidence=IEA]
[GO:0050830 "defense response to Gram-positive bacterium"
evidence=IEA] [GO:0008063 "Toll signaling pathway" evidence=IEA]
[GO:0009620 "response to fungus" evidence=IEA] [GO:0060049
"regulation of protein glycosylation" evidence=IMP] [GO:0048935
"peripheral nervous system neuron development" evidence=IMP]
[GO:0002227 "innate immune response in mucosa" evidence=IMP]
InterPro:IPR000157 InterPro:IPR001611 InterPro:IPR027202
Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
GO:GO:0016021 EMBL:AE014296 InterPro:IPR003591 SMART:SM00369
GO:GO:0005622 InterPro:IPR000372 SMART:SM00013 GO:GO:0004888
GO:GO:0002227 GO:GO:0048935 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00700000104286 GO:GO:0060049 SUPFAM:SSF52200
PANTHER:PTHR24371:SF0 HSSP:O60603 FlyBase:FBgn0029114 EMBL:AF204158
EMBL:AF247764 EMBL:AY118551 RefSeq:NP_524757.1 UniGene:Dm.3403
SMR:Q9V477 IntAct:Q9V477 MINT:MINT-316842 STRING:Q9V477
EnsemblMetazoa:FBtr0075607 GeneID:44497 KEGG:dme:Dmel_CG6890
UCSC:CG6890-RA CTD:44497 InParanoid:Q9V477 OMA:TIRTHNG
GenomeRNAi:44497 NextBio:837325 Uniprot:Q9V477
Length = 1346
Score = 253 (94.1 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 111/408 (27%), Positives = 184/408 (45%)
Query: 91 LEPDERVSL-LDCT---LSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQ 146
++P V L L+C ++ P F V L L I +L N++DG+F GL L+
Sbjct: 67 IQPQNTVRLRLECNDALFFQSSLSPDSFRSLVELRDLTIEYCKLGNLTDGSFRGLQE-LR 125
Query: 147 ALGLPNN-----LLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSY 201
L + + +S+ S L+RLDLS N ++ + + L SL L+ SY
Sbjct: 126 NLTIRTHNGDWSTMSLEMASNSFVEFRQLERLDLSLNNIWLIPDGMVCPLKSLQHLNASY 185
Query: 202 NKLMTLSQDCLAPLV----------TLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNL 251
NK+ +S + + TL+ L L N++ A L L +T L+++ N
Sbjct: 186 NKIQDISNFYFSASLSSRKARVCGSTLQSLDLSANKMVSLPTAMLSALGRLTHLNMAKNS 245
Query: 252 LAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRA 311
++ L L SL+V+ ++ N+ +S+ A +L + +N I+VL F
Sbjct: 246 MSF-LADRAFEGLLSLRVVDLSANRLTSLPPELFAETKQLQEIYLRNNSINVLAPGIFGE 304
Query: 312 LSTLSHLDLAHNRIVA--VSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLD 369
L+ L LDLA N + + ++ A+ L L LDLS N + L + PL SLQ L+L+
Sbjct: 305 LAELLVLDLASNELNSQWINAATFVGLKRLMMLDLSANKISRLEAHIFRPLASLQILKLE 364
Query: 370 DNDISMEPECIYVGFNTMDLELIYSGVWRHSTLLIPVMLSLCTRSSVVTRYRYCVVLIEG 429
DN I P I+ + H+ +L +S+ + ++ V+ ++
Sbjct: 365 DNYIDQLPGGIFADLTNL-----------HTLILSRNRISVIEQRTLQGLKNLLVLSLDF 413
Query: 430 SNI--LDQSALVLGCSEILALVPTLTSQPLSYVTSLRANVTGLGTVQV 475
+ I +DQ +LV CS++ L L L V A+V L T+ V
Sbjct: 414 NRISRMDQRSLV-NCSQLQDL--HLNDNKLQAVPEALAHVQLLKTLDV 458
Score = 249 (92.7 bits), Expect = 3.1e-19, Sum P(2) = 3.1e-19
Identities = 93/321 (28%), Positives = 143/321 (44%)
Query: 87 SLRGLEPDERVSLL----DCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLS 142
S RGL+ +++ D + ++ + F+E L L +S + I DG L
Sbjct: 117 SFRGLQELRNLTIRTHNGDWSTMSLEMASNSFVEFRQLERLDLSLNNIWLIPDGMVCPLK 176
Query: 143 SPLQALGLPNNLLSVVP----TSALAP-----LAPNLDRLDLSHNQLYKLENTSFKGLSS 193
S LQ L N + + +++L+ L LDLS N++ L L
Sbjct: 177 S-LQHLNASYNKIQDISNFYFSASLSSRKARVCGSTLQSLDLSANKMVSLPTAMLSALGR 235
Query: 194 LNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLA 253
L L+++ N + L+ L++LRV+ L NRLT + + ++ L +N +
Sbjct: 236 LTHLNMAKNSMSFLADRAFEGLLSLRVVDLSANRLTSLPPELFAETKQLQEIYLRNNSI- 294
Query: 254 GPLGPSTVPRLSSLKVLSIAHNQFSS--VRRGALAGLDKLTSLSCHHNQIDVLEDHSFRA 311
L P L+ L VL +A N+ +S + GL +L L N+I LE H FR
Sbjct: 295 NVLAPGIFGELAELLVLDLASNELNSQWINAATFVGLKRLMMLDLSANKISRLEAHIFRP 354
Query: 312 LSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
L++L L L N I + G A L+NL TL LS N + + Q + LK+L L LD N
Sbjct: 355 LASLQILKLEDNYIDQLPGGIFADLTNLHTLILSRNRISVIEQRTLQGLKNLLVLSLDFN 414
Query: 372 DIS-MEPECIYVGFNTMDLEL 391
IS M+ + DL L
Sbjct: 415 RISRMDQRSLVNCSQLQDLHL 435
Score = 229 (85.7 bits), Expect = 4.8e-17, Sum P(2) = 4.8e-17
Identities = 78/277 (28%), Positives = 132/277 (47%)
Query: 99 LLDCTLSNVTVLPGK-FLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSV 157
++D + + +T LP + F E L + + + + ++ G F G + L L L +N L+
Sbjct: 262 VVDLSANRLTSLPPELFAETKQLQEIYLRNNSINVLAPGIF-GELAELLVLDLASNELNS 320
Query: 158 VPTSALAPLA-PNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLV 216
+A + L LDLS N++ +LE F+ L+SL L L N + L A L
Sbjct: 321 QWINAATFVGLKRLMMLDLSANKISRLEAHIFRPLASLQILKLEDNYIDQLPGGIFADLT 380
Query: 217 TLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQ 276
L L L NR++V LQGL+++ L L N ++ + ++ S L+ L + N+
Sbjct: 381 NLHTLILSRNRISVIEQRTLQGLKNLLVLSLDFNRISR-MDQRSLVNCSQLQDLHLNDNK 439
Query: 277 FSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHL 336
+V ALA + L +L N I +E+ S L +L L + N + + +
Sbjct: 440 LQAVPE-ALAHVQLLKTLDVGENMISQIENTSITQLESLYGLRMTENSLTHIRRGVFDRM 498
Query: 337 SNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 373
S+L L+LS N L+++ + LQ +RLD N +
Sbjct: 499 SSLQILNLSQNKLKSIEAGSLQRNSQLQAIRLDGNQL 535
Score = 204 (76.9 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 76/260 (29%), Positives = 118/260 (45%)
Query: 117 GVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLS 176
G TL L +S+ ++ ++ A + L L + N +S + A L +L +DLS
Sbjct: 209 GSTLQSLDLSANKMVSLPT-AMLSALGRLTHLNMAKNSMSFLADRAFEGLL-SLRVVDLS 266
Query: 177 HNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVV--A 234
N+L L F L + L N + L+ L L VL L N L + A
Sbjct: 267 ANRLTSLPPELFAETKQLQEIYLRNNSINVLAPGIFGELAELLVLDLASNELNSQWINAA 326
Query: 235 ALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSL 294
GL+ + LDLS N ++ L L+SL++L + N + G A L L +L
Sbjct: 327 TFVGLKRLMMLDLSANKISR-LEAHIFRPLASLQILKLEDNYIDQLPGGIFADLTNLHTL 385
Query: 295 SCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQ 354
N+I V+E + + L L L L NRI + SL + S L L L+ N L+A+ +
Sbjct: 386 ILSRNRISVIEQRTLQGLKNLLVLSLDFNRISRMDQRSLVNCSQLQDLHLNDNKLQAVPE 445
Query: 355 DLITPLKSLQELRLDDNDIS 374
L ++ L+ L + +N IS
Sbjct: 446 AL-AHVQLLKTLDVGENMIS 464
Score = 150 (57.9 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 58/201 (28%), Positives = 88/201 (43%)
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 317
PS +P + S + L + N F ++ A G +L L +H++I+VL + +F L L
Sbjct: 786 PSHIP-MDSTQ-LYLDGNNFRELQSHAFIGRKRLKVLHLNHSRIEVLHNRTFYGLLELEV 843
Query: 318 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEP 377
L L N++ A++G L NL L L HN + + T L L+ LRLD N I+
Sbjct: 844 LQLQSNQLKALNGNEFQGLDNLQELYLQHNAIATIDTLTFTHLYHLKILRLDHNAITSFA 903
Query: 378 ECIYVGFNTMDLELIYSGVWRHSTLLIPVMLSLCTRSS-VVTRYRYCVVLIEGSNILDQS 436
++ +L L S W S I + R VV + + +I G N Q
Sbjct: 904 VWNFLPSYLNELRLA-SNPWTCSCEFIDKLRDYINRHEYVVDKLKMKCDVISG-NSTQQM 961
Query: 437 ALVLGCSEILALVPTLTSQPL 457
+ G E +L SQ L
Sbjct: 962 VIYPGSGEPASLPVVQCSQTL 982
Score = 144 (55.7 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 73/292 (25%), Positives = 132/292 (45%)
Query: 105 SNVTVLPGKFLEGVTLHGLVISSGELKNIS--DGAFIGLSSPLQALGLPNNLLSVVPTSA 162
+ ++V+ + L+G L L++ S + IS D + S LQ L L +N L VP A
Sbjct: 390 NRISVIEQRTLQG--LKNLLVLSLDFNRISRMDQRSLVNCSQLQDLHLNDNKLQAVP-EA 446
Query: 163 LAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLR 222
LA + L LD+ N + ++ENTS L SL L ++ N L + + + +L++L
Sbjct: 447 LAHVQL-LKTLDVGENMISQIENTSITQLESLYGLRMTENSLTHIRRGVFDRMSSLQILN 505
Query: 223 LQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRR 282
L N+L +LQ + + L N L G T L +L L+I+ N+
Sbjct: 506 LSQNKLKSIEAGSLQRNSQLQAIRLDGNQLKSIAGLFT--ELPNLVWLNISGNRLEKFDY 563
Query: 283 GALA-GLDKLTSLSCHHNQIDVLEDH-SFRALSTLSHLDLAHNRIVAVSGASLAHLSNLT 340
+ GL L N+I L ++ + +LS D ++N + ++ +S+ + ++
Sbjct: 564 SHIPIGLQWL---DVRANRITQLGNYFEIESELSLSTFDASYNLLTEITASSIPN--SVE 618
Query: 341 TLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS-MEPECIYVGFNTMDLEL 391
L L+ N + + +L + L N ++ +EP + + D E+
Sbjct: 619 VLYLNDNQISKIQPYTFFKKPNLTRVDLVRNRLTTLEPNALRLSPIAEDREI 670
Score = 69 (29.3 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L+VL + NQ ++ GLD L L HN I ++ +F+++
Sbjct: 838 LLELEVLQLQSNQLKALNGNEFQGLDNLQELYLQHNAIATIDTLTFTHL 886
Score = 59 (25.8 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 11/38 (28%), Positives = 24/38 (63%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
+SSL++L+++ N+ S+ G+L +L ++ NQ+
Sbjct: 498 MSSLQILNLSQNKLKSIEAGSLQRNSQLQAIRLDGNQL 535
Score = 56 (24.8 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 16/64 (25%), Positives = 33/64 (51%)
Query: 630 SDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
S + Y + + I + S + L + N F ++ A G +L L +H++I+VL + +F
Sbjct: 777 SRASYEQTLPSHIPMDSTQ-LYLDGNNFRELQSHAFIGRKRLKVLHLNHSRIEVLHNRTF 835
Query: 690 SNVI 693
++
Sbjct: 836 YGLL 839
Score = 56 (24.8 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 22/92 (23%), Positives = 39/92 (42%)
Query: 602 RTPRNSTIHHHACFIPVAQQEDDINRNNSDSRYVKLQATTIL-LSSLKVLSIAHNQFSSV 660
R T+ H IP+ + ++ NN + +LQ+ + LKVL + H++ +
Sbjct: 778 RASYEQTLPSH---IPMDSTQLYLDGNN----FRELQSHAFIGRKRLKVLHLNHSRIEVL 830
Query: 661 RRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
GL +L L NQ+ L + F +
Sbjct: 831 HNRTFYGLLELEVLQLQSNQLKALNGNEFQGL 862
Score = 54 (24.1 bits), Expect = 4.2e-18, Sum P(2) = 4.2e-18
Identities = 14/51 (27%), Positives = 26/51 (50%)
Query: 636 KLQATTIL-LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLE 685
+++ T+I L SL L + N + +RRG + L L+ N++ +E
Sbjct: 465 QIENTSITQLESLYGLRMTENSLTHIRRGVFDRMSSLQILNLSQNKLKSIE 515
Score = 50 (22.7 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 16/69 (23%), Positives = 33/69 (47%)
Query: 622 EDDINRNNSDSRYVKLQATTI--LLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 679
E +++ + D+ Y L T + +S++VL + NQ S ++ LT + N
Sbjct: 590 ESELSLSTFDASYNLLTEITASSIPNSVEVLYLNDNQISKIQPYTFFKKPNLTRVDLVRN 649
Query: 680 QIDVLEDHS 688
++ LE ++
Sbjct: 650 RLTTLEPNA 658
Score = 46 (21.3 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 15/55 (27%), Positives = 27/55 (49%)
Query: 638 QATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
Q + + S L+ L + N+ +V ALA + L +L N I +E+ S + +
Sbjct: 421 QRSLVNCSQLQDLHLNDNKLQAVPE-ALAHVQLLKTLDVGENMISQIENTSITQL 474
Score = 39 (18.8 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 11/38 (28%), Positives = 17/38 (44%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
L +L+ L + HN +++ L L L HN I
Sbjct: 862 LDNLQELYLQHNAIATIDTLTFTHLYHLKILRLDHNAI 899
>MGI|MGI:2443718 [details] [associations]
symbol:Lrig2 "leucine-rich repeats and immunoglobulin-like
domains 2" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:2443718 GO:GO:0016021 GO:GO:0005886
GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00690000101816 HOGENOM:HOG000113380
HOVERGEN:HBG052353 CTD:9860 OMA:FPTNHER OrthoDB:EOG41NTKF
EMBL:AK173030 EMBL:BC094228 IPI:IPI00605095 IPI:IPI00649164
RefSeq:NP_001020238.1 UniGene:Mm.34855 ProteinModelPortal:Q52KR2
SMR:Q52KR2 PhosphoSite:Q52KR2 PRIDE:Q52KR2
Ensembl:ENSMUST00000046316 GeneID:269473 KEGG:mmu:269473
UCSC:uc008que.1 UCSC:uc012cvk.1 InParanoid:Q52KR2 NextBio:392862
Bgee:Q52KR2 Genevestigator:Q52KR2 GermOnline:ENSMUSG00000032913
Uniprot:Q52KR2
Length = 1054
Score = 268 (99.4 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 102/374 (27%), Positives = 165/374 (44%)
Query: 100 LDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVP 159
LD + + ++ + ++L L +S+ + + G F LS L + L N +S++P
Sbjct: 148 LDLSSNIISEIKTSSFPRMSLKYLNLSNNRISTLEAGCFDNLSDSLLVVKLNRNRISMIP 207
Query: 160 TSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLR 219
P+L L+L N++ +E +F+GL SL L + N + L L +
Sbjct: 208 PKVFK--LPHLQFLELKRNRIKIVEGLTFQGLDSLRSLKMQRNGISKLKDGAFFGLNNME 265
Query: 220 VLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSS 279
L L+ N LT L GLR + L +S N + + P L L +++NQ +
Sbjct: 266 ELELEHNNLTGVNKGWLYGLRMLQQLYMSQNAIE-KISPDAWEFCQRLSELDLSYNQLTR 324
Query: 280 VRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV-AVSGASLAH--L 336
+ A GL L L+ N++ + D FR LS L LDL +N I A+ AS A L
Sbjct: 325 LDESAFVGLSLLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNNDISWAIEDASEAFSGL 384
Query: 337 SNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELIYSGV 396
+LT L L N ++++TQ L+SL+ L L++N I E + + L L S +
Sbjct: 385 KSLTKLILQGNRIKSVTQKAFIGLESLEYLDLNNNAIMSIQENAFSQTHLKGLVLNTSSL 444
Query: 397 WR--HSTLLIPVMLSLCTRSSVVTRYRYCVVLIEGSNILDQSALVLGCSEILALVPTLTS 454
H L+ ++ SV + L G +IL+ C + L P + +
Sbjct: 445 LCDCHLKWLLQWLVDNNFHHSVNVSCAHPEWLA-GQSILNVDLKDFVCDDFLK--PQIRT 501
Query: 455 QPLSYVTSLRANVT 468
P S + NVT
Sbjct: 502 HPESTIALRGVNVT 515
Score = 261 (96.9 bits), Expect = 8.9e-19, P = 8.9e-19
Identities = 84/305 (27%), Positives = 147/305 (48%)
Query: 92 EPDERVSLLDCTLSNVTVLPGKFLEGVT-LHGLVISSGELKNISDGAFIGLSSPLQALGL 150
EP ++LL + + + + E + L L +SS + I +F +S L+ L L
Sbjct: 116 EPTPNITLLSLVHNLIPEINAEAFELYSALESLDLSSNIISEIKTSSFPRMS--LKYLNL 173
Query: 151 PNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQD 210
NN +S + L+ +L + L+ N++ + FK L L FL+L N++ +
Sbjct: 174 SNNRISTLEAGCFDNLSDSLLVVKLNRNRISMIPPKVFK-LPHLQFLELKRNRIKIVEGL 232
Query: 211 CLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVL 270
L +LR L++Q N ++ A GL ++ +L+L HN L G + + L L+ L
Sbjct: 233 TFQGLDSLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTG-VNKGWLYGLRMLQQL 291
Query: 271 SIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSG 330
++ N + A +L+ L +NQ+ L++ +F LS L L+L NR+ ++
Sbjct: 292 YMSQNAIEKISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIAD 351
Query: 331 ASLAHLSNLTTLDLSHNFLRALTQDL---ITPLKSLQELRLDDNDISMEPECIYVGFNTM 387
LSNL TLDL +N + +D + LKSL +L L N I + ++G ++
Sbjct: 352 GVFRFLSNLQTLDLRNNDISWAIEDASEAFSGLKSLTKLILQGNRIKSVTQKAFIGLESL 411
Query: 388 D-LEL 391
+ L+L
Sbjct: 412 EYLDL 416
Score = 238 (88.8 bits), Expect = 4.2e-18, Sum P(2) = 4.2e-18
Identities = 80/273 (29%), Positives = 138/273 (50%)
Query: 105 SNVTVLP--GKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSA 162
+ +T +P G+ +TL LV + + I+ AF L S L++L L +N++S + TS+
Sbjct: 106 NELTEIPYFGEPTPNITLLSLVHNL--IPEINAEAF-ELYSALESLDLSSNIISEIKTSS 162
Query: 163 LAPLAPNLDRLDLSHNQLYKLENTSFKGLS-SLNFLDLSYNKLMTLSQDCLAPLVTLRVL 221
++ L L+LS+N++ LE F LS SL + L+ N++ + L L+ L
Sbjct: 163 FPRMS--LKYLNLSNNRISTLEAGCFDNLSDSLLVVKLNRNRISMIPPKVFK-LPHLQFL 219
Query: 222 RLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVR 281
L+ NR+ + QGL S+ L + N ++ L L++++ L + HN + V
Sbjct: 220 ELKRNRIKIVEGLTFQGLDSLRSLKMQRNGIS-KLKDGAFFGLNNMEELELEHNNLTGVN 278
Query: 282 RGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTT 341
+G L GL L L N I+ + ++ LS LDL++N++ + ++ LS L
Sbjct: 279 KGWLYGLRMLQQLYMSQNAIEKISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLER 338
Query: 342 LDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 374
L+L N + + + L +LQ L L +NDIS
Sbjct: 339 LNLGDNRVTHIADGVFRFLSNLQTLDLRNNDIS 371
Score = 238 (88.8 bits), Expect = 4.2e-18, Sum P(2) = 4.2e-18
Identities = 81/297 (27%), Positives = 135/297 (45%)
Query: 96 RVSLLDCTLSNVTVLPGKFLEGVT---LHGLVISSGELKNISDGAFIGLSSPLQALGLPN 152
R+ LLDC+ + + L G + L +S L N ++ S LQ + +
Sbjct: 49 RLPLLDCSRRKLPAPSWRALSGPLPSDISSLDLSHNRLSNWNNTLE---SQTLQEVKMNY 105
Query: 153 NLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCL 212
N L+ +P P PN+ L L HN + ++ +F+ S+L LDLS N + +
Sbjct: 106 NELTEIPYFG-EP-TPNITLLSLVHNLIPEINAEAFELYSALESLDLSSNIISEIKTSSF 163
Query: 213 APLVTLRVLRLQGNRLTVSVVAALQGLR-SVTDLDLSHNLLAGPLGPSTVPRLSSLKVLS 271
P ++L+ L L NR++ L S+ + L+ N ++ + P V +L L+ L
Sbjct: 164 -PRMSLKYLNLSNNRISTLEAGCFDNLSDSLLVVKLNRNRIS--MIPPKVFKLPHLQFLE 220
Query: 272 IAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGA 331
+ N+ V GLD L SL N I L+D +F L+ + L+L HN + V+
Sbjct: 221 LKRNRIKIVEGLTFQGLDSLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTGVNKG 280
Query: 332 SLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMD 388
L L L L +S N + ++ D + L EL L N ++ E +VG + ++
Sbjct: 281 WLYGLRMLQQLYMSQNAIEKISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLE 337
Score = 130 (50.8 bits), Expect = 0.00014, P = 0.00014
Identities = 41/141 (29%), Positives = 72/141 (51%)
Query: 81 LYAISESLRGLEPD-----ERVSLLDCTLSNVTVLPGKFLEGVTL-HGLVISSGELKNIS 134
LY ++ + PD +R+S LD + + +T L G++L L + + +I+
Sbjct: 291 LYMSQNAIEKISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIA 350
Query: 135 DGAFIGLSSPLQALGLPNNLLSVVPTSALAPLA--PNLDRLDLSHNQLYKLENTSFKGLS 192
DG F LS+ LQ L L NN +S A + +L +L L N++ + +F GL
Sbjct: 351 DGVFRFLSN-LQTLDLRNNDISWAIEDASEAFSGLKSLTKLILQGNRIKSVTQKAFIGLE 409
Query: 193 SLNFLDLSYNKLMTLSQDCLA 213
SL +LDL+ N +M++ ++ +
Sbjct: 410 SLEYLDLNNNAIMSIQENAFS 430
Score = 67 (28.6 bits), Expect = 4.2e-18, Sum P(2) = 4.2e-18
Identities = 20/65 (30%), Positives = 34/65 (52%)
Query: 627 RNNSDSRYVKLQATTIL-LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLE 685
RNN S ++ + L SL L + N+ SV + A GL+ L L ++N I ++
Sbjct: 366 RNNDISWAIEDASEAFSGLKSLTKLILQGNRIKSVTQKAFIGLESLEYLDLNNNAIMSIQ 425
Query: 686 DHSFS 690
+++FS
Sbjct: 426 ENAFS 430
Score = 51 (23.0 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 647 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
L L +++NQ + + A GL L L+ N++ + D F
Sbjct: 312 LSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVF 354
>FB|FBgn0261509 [details] [associations]
symbol:haf "hattifattener" species:7227 "Drosophila
melanogaster" [GO:0008045 "motor neuron axon guidance"
evidence=IMP] InterPro:IPR001611 PROSITE:PS51450 EMBL:AE014134
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0008045
HSSP:Q9BZR6 GeneTree:ENSGT00700000104286 RefSeq:NP_608607.1
UniGene:Dm.18437 ProteinModelPortal:Q9VQ25 SMR:Q9VQ25
MINT:MINT-770476 PRIDE:Q9VQ25 EnsemblMetazoa:FBtr0077875
GeneID:33339 KEGG:dme:Dmel_CG14351 UCSC:CG14351-RA CTD:33339
FlyBase:FBgn0261509 InParanoid:Q9VQ25 OMA:QECIIVC OrthoDB:EOG4PC871
GenomeRNAi:33339 NextBio:783103 ArrayExpress:Q9VQ25 Bgee:Q9VQ25
Uniprot:Q9VQ25
Length = 1316
Score = 281 (104.0 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 101/315 (32%), Positives = 158/315 (50%)
Query: 63 LCACDLPHTL--RCT-ANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVT 119
+CA +L L +C + S L A + L+P V LL S ++ LP ++
Sbjct: 49 ICAYNLGRELSVQCDQVDFSQLLAAMNTHARLKP---VDLLYVNNSTISELPDAVFSNLS 105
Query: 120 LHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQ 179
LH L +SS ++ I+ GAF G S L+ L L +NLL+ VP AL L L+ LDLS NQ
Sbjct: 106 LHNLQLSSCGIQRIATGAFKGQESVLRNLNLQDNLLADVPVEALKVLG-KLNLLDLSKNQ 164
Query: 180 LYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLV-TLRVLRLQGNRLTVSVVAALQG 238
L + + +F GL+ L+ L L+ N + TL+ + L +L+ L L+G + V +++G
Sbjct: 165 LSHIPDDAFVGLTKLSTLKLNDNNV-TLASNAFRGLEQSLKNLNLKGTKQR-KVPESIRG 222
Query: 239 LRSVTDLDLSHN---LLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDK-LTSL 294
L+S+ LDLS N L G G L +L L++ N S+ A AG+ K L+SL
Sbjct: 223 LKSLAFLDLSQNGIKELPGAGGIRVFDGLDALTALNLERNLIQSIGETAFAGVRKTLSSL 282
Query: 295 SCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQ 354
S +N + + +L L LD+ N + ++ A+ +T L L N L ++ +
Sbjct: 283 SLLNNLLAEFPIGAVHSLKELRVLDIGFNLLTSLPEAAFRGNPGITLLALDGNPLSSVPE 342
Query: 355 DLITPLKS-LQELRL 368
L + L+ L L
Sbjct: 343 GAFAHLNATLRGLSL 357
Score = 210 (79.0 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 78/283 (27%), Positives = 123/283 (43%)
Query: 123 LVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYK 182
L +++ + + D F LS L L L + + + T A L L+L N L
Sbjct: 86 LYVNNSTISELPDAVFSNLS--LHNLQLSSCGIQRIATGAFKGQESVLRNLNLQDNLLAD 143
Query: 183 LENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGL-RS 241
+ + K L LN LDLS N+L + D L L L+L N +T++ A +GL +S
Sbjct: 144 VPVEALKVLGKLNLLDLSKNQLSHIPDDAFVGLTKLSTLKLNDNNVTLAS-NAFRGLEQS 202
Query: 242 VTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVR-RGALA---GLDKLTSLSCH 297
+ +L+L P ++ L SL L ++ N + G + GLD LT+L+
Sbjct: 203 LKNLNLKGTKQRKV--PESIRGLKSLAFLDLSQNGIKELPGAGGIRVFDGLDALTALNLE 260
Query: 298 HNQIDVLEDHSFRAL-STLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDL 356
N I + + +F + TLS L L +N + ++ L L LD+ N L +L +
Sbjct: 261 RNLIQSIGETAFAGVRKTLSSLSLLNNLLAEFPIGAVHSLKELRVLDIGFNLLTSLPEAA 320
Query: 357 ITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELIYSGVWRH 399
+ L LD N +S PE + N L G + H
Sbjct: 321 FRGNPGITLLALDGNPLSSVPEGAFAHLNATLRGLSLGGRFLH 363
Score = 38 (18.4 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 647 LKVLSIAHNQFSSVRRGALAGLDK-LTSLS 675
+ +L++ N SSV GA A L+ L LS
Sbjct: 327 ITLLALDGNPLSSVPEGAFAHLNATLRGLS 356
>MGI|MGI:1919006 [details] [associations]
symbol:Cpn2 "carboxypeptidase N, polypeptide 2"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 MGI:MGI:1919006 GO:GO:0005576 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
CTD:1370 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 HOGENOM:HOG000294123
HOVERGEN:HBG050814 KO:K13023 OMA:WQCDCHL OrthoDB:EOG4WM4TF
EMBL:AK005049 EMBL:BC025836 EMBL:BC138287 EMBL:BC138288
IPI:IPI00119522 RefSeq:NP_082180.2 UniGene:Mm.290614
ProteinModelPortal:Q9DBB9 SMR:Q9DBB9 STRING:Q9DBB9 PaxDb:Q9DBB9
PRIDE:Q9DBB9 Ensembl:ENSMUST00000064856 GeneID:71756 KEGG:mmu:71756
UCSC:uc007ywm.1 GeneTree:ENSGT00700000104286 InParanoid:B2RR89
NextBio:334421 Bgee:Q9DBB9 CleanEx:MM_CPN2 Genevestigator:Q9DBB9
GermOnline:ENSMUSG00000023176 Uniprot:Q9DBB9
Length = 547
Score = 256 (95.2 bits), Expect = 4.8e-18, Sum P(2) = 4.8e-18
Identities = 79/270 (29%), Positives = 126/270 (46%)
Query: 120 LHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQ 179
L L I+ + N+S F LSS L+ L L + L+ +P + L+ L L NQ
Sbjct: 99 LQDLEITGSPVSNLSAHIFSNLSS-LEKLTLDFDRLAGLPEDLFCHM-DILESLQLQGNQ 156
Query: 180 LYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGL 239
L L F+ L L L+L+ N L L + L L++L+L N L AL L
Sbjct: 157 LRTLPGRLFQSLRDLRTLNLAQNLLTQLPKGAFQSLTGLQMLKLSNNMLARLPEGALGSL 216
Query: 240 RSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 299
S+ +L L N + L P +L SL++L + HN + + L LT LS N
Sbjct: 217 SSLQELFLDGNAIT-ELSPHLFSQLFSLEMLWLQHNAICHLPVSLFSSLHNLTFLSLKDN 275
Query: 300 QIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITP 359
+ L + F L HL L++N++ + + +LS L +L LSHN + L + +
Sbjct: 276 ALRTLPEGLFAHNQGLLHLSLSYNQLETIPEGAFTNLSRLVSLTLSHNAITDLPEHVFRN 335
Query: 360 LKSLQELRLDDNDISMEPECIYVGFNTMDL 389
L+ L +L LD N+++ ++ + + L
Sbjct: 336 LEQLVKLSLDSNNLTALHPALFHNLSRLQL 365
Score = 255 (94.8 bits), Expect = 6.4e-18, Sum P(2) = 6.4e-18
Identities = 78/233 (33%), Positives = 108/233 (46%)
Query: 120 LHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQ 179
L L + +L+ + F L L+ L L NLL+ +P A L L L LS+N
Sbjct: 147 LESLQLQGNQLRTLPGRLFQSLRD-LRTLNLAQNLLTQLPKGAFQSLT-GLQMLKLSNNM 204
Query: 180 LYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGL 239
L +L + LSSL L L N + LS + L +L +L LQ N + V+ L
Sbjct: 205 LARLPEGALGSLSSLQELFLDGNAITELSPHLFSQLFSLEMLWLQHNAICHLPVSLFSSL 264
Query: 240 RSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 299
++T L L N L L L LS+++NQ ++ GA L +L SL+ HN
Sbjct: 265 HNLTFLSLKDNALR-TLPEGLFAHNQGLLHLSLSYNQLETIPEGAFTNLSRLVSLTLSHN 323
Query: 300 QIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRAL 352
I L +H FR L L L L N + A+ A +LS L L+LS N L L
Sbjct: 324 AITDLPEHVFRNLEQLVKLSLDSNNLTALHPALFHNLSRLQLLNLSRNQLTTL 376
Score = 246 (91.7 bits), Expect = 3.4e-19, Sum P(2) = 3.4e-19
Identities = 78/261 (29%), Positives = 119/261 (45%)
Query: 137 AFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNF 196
AF G + + + L + + P A L P L L+++ + + L F LSSL
Sbjct: 68 AFSGSPNLTKVVFLNTQVRHLEP-DAFGGL-PRLQDLEITGSPVSNLSAHIFSNLSSLEK 125
Query: 197 LDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPL 256
L L +++L L +D + L L+LQGN+L Q LR + L+L+ NLL L
Sbjct: 126 LTLDFDRLAGLPEDLFCHMDILESLQLQGNQLRTLPGRLFQSLRDLRTLNLAQNLLT-QL 184
Query: 257 GPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLS 316
L+ L++L +++N + + GAL L L L N I L H F L +L
Sbjct: 185 PKGAFQSLTGLQMLKLSNNMLARLPEGALGSLSSLQELFLDGNAITELSPHLFSQLFSLE 244
Query: 317 HLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISME 376
L L HN I + + + L NLT L L N LR L + L + L L L N +
Sbjct: 245 MLWLQHNAICHLPVSLFSSLHNLTFLSLKDNALRTLPEGLFAHNQGLLHLSLSYNQLETI 304
Query: 377 PECIYVGFNTM-DLELIYSGV 396
PE + + + L L ++ +
Sbjct: 305 PEGAFTNLSRLVSLTLSHNAI 325
Score = 203 (76.5 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 68/228 (29%), Positives = 104/228 (45%)
Query: 105 SNVTVLPGKFLEGVT-LHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSAL 163
+ + LPG+ + + L L ++ L + GAF L+ LQ L L NN+L+ +P AL
Sbjct: 155 NQLRTLPGRLFQSLRDLRTLNLAQNLLTQLPKGAFQSLTG-LQMLKLSNNMLARLPEGAL 213
Query: 164 APLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRL 223
L+ +L L L N + +L F L SL L L +N + L + L L L L
Sbjct: 214 GSLS-SLQELFLDGNAITELSPHLFSQLFSLEMLWLQHNAICHLPVSLFSSLHNLTFLSL 272
Query: 224 QGNRLTVSVVAALQGLRSVTDLDLSHNLLAG-PLGPSTVPRLSSLKVLSIAHNQFSSVRR 282
+ N L + + L LS+N L P G T LS L L+++HN + +
Sbjct: 273 KDNALRTLPEGLFAHNQGLLHLSLSYNQLETIPEGAFT--NLSRLVSLTLSHNAITDLPE 330
Query: 283 GALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSG 330
L++L LS N + L F LS L L+L+ N++ + G
Sbjct: 331 HVFRNLEQLVKLSLDSNNLTALHPALFHNLSRLQLLNLSRNQLTTLPG 378
Score = 172 (65.6 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 77/269 (28%), Positives = 112/269 (41%)
Query: 59 IKNDL-CACDLPHTLRCTANKSDLYA--ISESLRGLEPDERVSLLDCTLSNVTVLP-GKF 114
+ DL C D+ +L+ N+ + +SLR L L+ + +T LP G F
Sbjct: 136 LPEDLFCHMDILESLQLQGNQLRTLPGRLFQSLRDLRT------LNLAQNLLTQLPKGAF 189
Query: 115 LEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLD 174
L L +S+ L + +GA LSS LQ L L N ++ + + L +L+ L
Sbjct: 190 QSLTGLQMLKLSNNMLARLPEGALGSLSS-LQELFLDGNAITELSPHLFSQLF-SLEMLW 247
Query: 175 LSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVA 234
L HN + L + F L +L FL L N L TL + A L L L N+L
Sbjct: 248 LQHNAICHLPVSLFSSLHNLTFLSLKDNALRTLPEGLFAHNQGLLHLSLSYNQLETIPEG 307
Query: 235 ALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSL 294
A L + L LSHN + L L L LS+ N +++ L +L L
Sbjct: 308 AFTNLSRLVSLTLSHNAITD-LPEHVFRNLEQLVKLSLDSNNLTALHPALFHNLSRLQLL 366
Query: 295 SCHHNQIDVLEDHSFRALSTLSHLDLAHN 323
+ NQ+ L F L +L L N
Sbjct: 367 NLSRNQLTTLPGGIFDTNYDLFNLALLGN 395
Score = 123 (48.4 bits), Expect = 0.00035, P = 0.00035
Identities = 62/199 (31%), Positives = 86/199 (43%)
Query: 97 VSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLS 156
+SL D L T+ G F L L +S +L+ I +GAF LS L +L L +N ++
Sbjct: 270 LSLKDNALR--TLPEGLFAHNQGLLHLSLSYNQLETIPEGAFTNLSR-LVSLTLSHNAIT 326
Query: 157 VVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLV 216
+P L L +L L N L L F LS L L+LS N+L TL
Sbjct: 327 DLPEHVFRNLE-QLVKLSLDSNNLTALHPALFHNLSRLQLLNLSRNQLTTLPGGIFDTNY 385
Query: 217 TLRVLRLQGN--RLTVSVVAALQGLRSVTD-LDLSHNLLAGP--LGPSTVPRLSSLKVLS 271
L L L GN + + LR + + +H AGP L VP L +++
Sbjct: 386 DLFNLALLGNPWQCDCHLSYLTSWLRLYNNQISNTHTFCAGPAYLKGQLVPNLKQEQLIC 445
Query: 272 IAHNQFSSVRRGALAGLDK 290
+ S R AL GLD+
Sbjct: 446 PVNPGHLSFR--AL-GLDE 461
Score = 110 (43.8 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 32/120 (26%), Positives = 57/120 (47%)
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 317
P P ++ + + A F++VR A +G LT + + Q+ LE +F L L
Sbjct: 45 PDIPPHITDIVFVETA---FTTVRTRAFSGSPNLTKVVFLNTQVRHLEPDAFGGLPRLQD 101
Query: 318 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEP 377
L++ + + +S ++LS+L L L + L L +DL + L+ L+L N + P
Sbjct: 102 LEITGSPVSNLSAHIFSNLSSLEKLTLDFDRLAGLPEDLFCHMDILESLQLQGNQLRTLP 161
Score = 89 (36.4 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 650 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
LS+++NQ ++ GA L +L SL+ HN I L +H F N+
Sbjct: 294 LSLSYNQLETIPEGAFTNLSRLVSLTLSHNAITDLPEHVFRNL 336
Score = 69 (29.3 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L+ L++L +++N + + GAL L L L N I L H FS +
Sbjct: 192 LTGLQMLKLSNNMLARLPEGALGSLSSLQELFLDGNAITELSPHLFSQL 240
Score = 61 (26.5 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L +L LS+ N ++ G A L LS +NQ++ + + +F+N+
Sbjct: 264 LHNLTFLSLKDNALRTLPEGLFAHNQGLLHLSLSYNQLETIPEGAFTNL 312
Score = 59 (25.8 bits), Expect = 3.4e-19, Sum P(2) = 3.4e-19
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
LS L L+++HN + + L++L LS N + L F N+
Sbjct: 312 LSRLVSLTLSHNAITDLPEHVFRNLEQLVKLSLDSNNLTALHPALFHNL 360
Score = 41 (19.5 bits), Expect = 2.6e-17, Sum P(2) = 2.6e-17
Identities = 11/41 (26%), Positives = 18/41 (43%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL 684
L L LS+ N +++ L +L L+ NQ+ L
Sbjct: 336 LEQLVKLSLDSNNLTALHPALFHNLSRLQLLNLSRNQLTTL 376
Score = 37 (18.1 bits), Expect = 4.8e-18, Sum P(2) = 4.8e-18
Identities = 7/20 (35%), Positives = 15/20 (75%)
Query: 644 LSSLKVLSIAHNQFSSVRRG 663
LS L++L+++ NQ +++ G
Sbjct: 360 LSRLQLLNLSRNQLTTLPGG 379
>FB|FBgn0036494 [details] [associations]
symbol:Toll-6 "Toll-6" species:7227 "Drosophila melanogaster"
[GO:0004888 "transmembrane signaling receptor activity"
evidence=ISS;NAS] [GO:0005886 "plasma membrane" evidence=NAS]
[GO:0016021 "integral to membrane" evidence=ISS] [GO:0006952
"defense response" evidence=NAS] [GO:0007165 "signal transduction"
evidence=IEA;ISS] Pfam:PF00560 InterPro:IPR000157
InterPro:IPR001611 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 GO:GO:0016021 InterPro:IPR003591 SMART:SM00369
GO:GO:0045087 GO:GO:0005622 InterPro:IPR000372 SMART:SM00013
GO:GO:0004888 SUPFAM:SSF52200 HSSP:O60603 FlyBase:FBgn0036494
EMBL:AF247766 ProteinModelPortal:Q9NBK9 STRING:Q9NBK9 PRIDE:Q9NBK9
InParanoid:Q9NBK9 ArrayExpress:Q9NBK9 Bgee:Q9NBK9 Uniprot:Q9NBK9
Length = 1514
Score = 262 (97.3 bits), Expect = 3.6e-19, Sum P(2) = 3.6e-19
Identities = 87/305 (28%), Positives = 149/305 (48%)
Query: 75 TANKSDLYAISE-SLRGLEPDERVSLLDCTLSNVTVLPGK-FLEGVTL-HGLVISSGELK 131
+ N + + I++ +L GL+ + +L+ + + + LP + F E + + + + +
Sbjct: 307 SVNNNGISMIADKALSGLK---NLQILNLSSNKIVALPTELFAEQAKIIQEVYLQNNSIS 363
Query: 132 NISDGAFIGLSSPLQALGLP-NNLLSV-VPTSALAPLAPNLDRLDLSHNQLYKLENTSFK 189
++ F L LQAL L N + S + + L L L+LSHN+L KLE F
Sbjct: 364 VLNPQLFSNLDQ-LQALDLSMNQITSTWIDKNTFVGLI-RLVLLNLSHNKLTKLEPEIFS 421
Query: 190 GLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSH 249
L +L L+L +N+L ++ D AP+ L L L N+L AL GL ++ L L +
Sbjct: 422 DLYTLQILNLRHNQLENIAADTFAPMNNLHTLLLSHNKLKYLDAYALNGLYVLSLLSLDN 481
Query: 250 NLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 309
N L G + P S+L+ L++ NQ +V AL + L ++ N I V+ED +F
Sbjct: 482 NALIG-VHPDAFRNCSALQDLNLNGNQLKTVPL-ALRNMRHLRTVDLGENMITVMEDSAF 539
Query: 310 RALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLD 369
+ L L L L N + ++ + L NL L+L+ N + + S+Q +RLD
Sbjct: 540 KGLGNLYGLRLIGNYLENITMHTFRDLPNLQILNLARNRIAVVEPGAFEMTSSIQAVRLD 599
Query: 370 DNDIS 374
N+++
Sbjct: 600 GNELN 604
Score = 241 (89.9 bits), Expect = 7.2e-17, Sum P(2) = 7.2e-17
Identities = 83/286 (29%), Positives = 135/286 (47%)
Query: 96 RVSLLDCTLSNVTVLPGKFLEGV-TLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNL 154
R+ +L + ++++ K L G+ L L +SS ++ + F + +Q + L NN
Sbjct: 302 RLRVLSVNNNGISMIADKALSGLKNLQILNLSSNKIVALPTELFAEQAKIIQEVYLQNNS 361
Query: 155 LSVVPTSALAPLAPNLDRLDLSHNQLYK--LENTSFKGLSSLNFLDLSYNKLMTLSQDCL 212
+SV+ + L L LDLS NQ+ ++ +F GL L L+LS+NKL L +
Sbjct: 362 ISVLNPQLFSNL-DQLQALDLSMNQITSTWIDKNTFVGLIRLVLLNLSHNKLTKLEPEIF 420
Query: 213 APLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSI 272
+ L TL++L L+ N+L + ++ L LSHN L L + L L +LS+
Sbjct: 421 SDLYTLQILNLRHNQLENIAADTFAPMNNLHTLLLSHNKLKY-LDAYALNGLYVLSLLSL 479
Query: 273 AHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGAS 332
+N V A L L+ + NQ+ + + R + L +DL N I + ++
Sbjct: 480 DNNALIGVHPDAFRNCSALQDLNLNGNQLKTVP-LALRNMRHLRTVDLGENMITVMEDSA 538
Query: 333 LAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISM-EP 377
L NL L L N+L +T L +LQ L L N I++ EP
Sbjct: 539 FKGLGNLYGLRLIGNYLENITMHTFRDLPNLQILNLARNRIAVVEP 584
Score = 213 (80.0 bits), Expect = 7.9e-14, Sum P(2) = 7.9e-14
Identities = 81/303 (26%), Positives = 142/303 (46%)
Query: 80 DLYAISESLRGLEPD-----ERVSLLDCTLSNVT---VLPGKFLEGVTLHGLVISSGELK 131
++Y + S+ L P +++ LD +++ +T + F+ + L L +S +L
Sbjct: 354 EVYLQNNSISVLNPQLFSNLDQLQALDLSMNQITSTWIDKNTFVGLIRLVLLNLSHNKLT 413
Query: 132 NISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGL 191
+ F L + LQ L L +N L + AP+ NL L LSHN+L L+ + GL
Sbjct: 414 KLEPEIFSDLYT-LQILNLRHNQLENIAADTFAPMN-NLHTLLLSHNKLKYLDAYALNGL 471
Query: 192 SSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNL 251
L+ L L N L+ + D L+ L L GN+L +V AL+ +R + +DL N+
Sbjct: 472 YVLSLLSLDNNALIGVHPDAFRNCSALQDLNLNGNQLK-TVPLALRNMRHLRTVDLGENM 530
Query: 252 LAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRA 311
+ + S L +L L + N ++ L L L+ N+I V+E +F
Sbjct: 531 IT-VMEDSAFKGLGNLYGLRLIGNYLENITMHTFRDLPNLQILNLARNRIAVVEPGAFEM 589
Query: 312 LSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
S++ + L N + ++G +++ +L L++S N L + + P +LQ L L N
Sbjct: 590 TSSIQAVRLDGNELNDINGL-FSNMPSLLWLNISDNRLESFDYGHV-P-STLQWLDLHKN 646
Query: 372 DIS 374
+S
Sbjct: 647 RLS 649
Score = 211 (79.3 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 65/254 (25%), Positives = 120/254 (47%)
Query: 126 SSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLEN 185
S+ E S + S L+ L + +N V+P + L L L +++N + + +
Sbjct: 260 STTESAKKSSSSSTSCSLDLEYLDVSHNDFVVLPANGFGTLR-RLRVLSVNNNGISMIAD 318
Query: 186 TSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTL-RVLRLQGNRLTVSVVAALQGLRSVTD 244
+ GL +L L+LS NK++ L + A + + + LQ N ++V L +
Sbjct: 319 KALSGLKNLQILNLSSNKIVALPTELFAEQAKIIQEVYLQNNSISVLNPQLFSNLDQLQA 378
Query: 245 LDLSHNLLAGP-LGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDV 303
LDLS N + + +T L L +L+++HN+ + + + L L L+ HNQ++
Sbjct: 379 LDLSMNQITSTWIDKNTFVGLIRLVLLNLSHNKLTKLEPEIFSDLYTLQILNLRHNQLEN 438
Query: 304 LEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSL 363
+ +F ++ L L L+HN++ + +L L L+ L L +N L + D +L
Sbjct: 439 IAADTFAPMNNLHTLLLSHNKLKYLDAYALNGLYVLSLLSLDNNALIGVHPDAFRNCSAL 498
Query: 364 QELRLDDNDISMEP 377
Q+L L+ N + P
Sbjct: 499 QDLNLNGNQLKTVP 512
Score = 172 (65.6 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 91/335 (27%), Positives = 149/335 (44%)
Query: 70 HTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGE 129
HTL + NK Y + +L GL +SL + L + V P F L L ++ +
Sbjct: 451 HTLLLSHNKLK-YLDAYALNGLYVLSLLSLDNNAL--IGVHPDAFRNCSALQDLNLNGNQ 507
Query: 130 LKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFK 189
LK + A + L+ + L N+++V+ SA L NL L L N L + +F+
Sbjct: 508 LKTVPL-ALRNMRH-LRTVDLGENMITVMEDSAFKGLG-NLYGLRLIGNYLENITMHTFR 564
Query: 190 GLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSH 249
L +L L+L+ N++ + +++ +RL GN L + + S+ L++S
Sbjct: 565 DLPNLQILNLARNRIAVVEPGAFEMTSSIQAVRLDGNELN-DINGLFSNMPSLLWLNISD 623
Query: 250 NLLAGPLGPSTVPRLSSLKVLSIAHNQFSSV-RRGALAGLDKLTSLSCHHNQIDVLEDHS 308
N L VP S+L+ L + N+ SS+ R L KL +L NQ+ + S
Sbjct: 624 NRLES-FDYGHVP--STLQWLDLHKNRLSSLSNRFGLDSELKLQTLDVSFNQLQRIGPSS 680
Query: 309 FRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRL 368
+++ L L N I V + H +NLT +DL N + L +KSL+ L +
Sbjct: 681 IP--NSIELLFLNDNLITTVDPDTFMHKTNLTRVDLYANQITTLD------IKSLRILPV 732
Query: 369 DDNDISMEPECIYVGFN--TMDLELIYSGVWRHST 401
++ PE Y+G N T D + + H T
Sbjct: 733 WEHRAL--PE-FYIGGNPFTCDCNIDWLQKINHIT 764
Score = 147 (56.8 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 64/231 (27%), Positives = 106/231 (45%)
Query: 170 LDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLT 229
L+RLDLS N ++ L + F LS L+ L++S N+L +++ L + T
Sbjct: 202 LERLDLSSNNIWSLPDNIFCTLSELSALNMSENRLQDVNE--LGFRDRSQEPTNGSTEST 259
Query: 230 VSVVAALQGLRSVTD-------LDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRR 282
+ +A + S T LD+SHN L + L L+VLS+ +N S +
Sbjct: 260 STTESAKKSSSSSTSCSLDLEYLDVSHNDFV-VLPANGFGTLRRLRVLSVNNNGISMIAD 318
Query: 283 GALAGLDKLTSLSCHHNQIDVLEDHSF-RALSTLSHLDLAHNRIVAVSGASLAHLSNLTT 341
AL+GL L L+ N+I L F + + L +N I ++ ++L L
Sbjct: 319 KALSGLKNLQILNLSSNKIVALPTELFAEQAKIIQEVYLQNNSISVLNPQLFSNLDQLQA 378
Query: 342 LDLSHNFLRA--LTQDLITPLKSLQELRLDDNDIS-MEPECIYVGFNTMDL 389
LDLS N + + + ++ L L L L N ++ +EPE I+ T+ +
Sbjct: 379 LDLSMNQITSTWIDKNTFVGLIRLVLLNLSHNKLTKLEPE-IFSDLYTLQI 428
Score = 143 (55.4 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 71/284 (25%), Positives = 122/284 (42%)
Query: 105 SNVTVLPGKFLEGVTLHGLVISSGEL---KNISDGAFIGLSSPLQALGLPNNLLSVVPTS 161
+N +V+P + + LH ++ + E+ + +F L LQ L + L +
Sbjct: 110 TNFSVIPAEHT--IALH--ILCNDEIMAKSRLEAQSFAHLVR-LQQLSIQYCKLGRLGRQ 164
Query: 162 ALAPLAPNLDRLDL-SHNQL-----YKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPL 215
L L L L L +HN L +++E +F L LDLS N + +L + L
Sbjct: 165 VLDGLE-QLRNLTLRTHNILWPALNFEIEADAFSVTRRLERLDLSSNNIWSLPDNIFCTL 223
Query: 216 VTLRVLRLQGNRLT-VSVVAALQGLRSVTD--LDLSHNLLAGPLGPSTVPRLS-SLKVLS 271
L L + NRL V+ + + T+ + + + S+ S L+ L
Sbjct: 224 SELSALNMSENRLQDVNELGFRDRSQEPTNGSTESTSTTESAKKSSSSSTSCSLDLEYLD 283
Query: 272 IAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGA 331
++HN F + L +L LS ++N I ++ D + L L L+L+ N+IVA+
Sbjct: 284 VSHNDFVVLPANGFGTLRRLRVLSVNNNGISMIADKALSGLKNLQILNLSSNKIVALPTE 343
Query: 332 SLAHLSNLTT-LDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 374
A + + + L +N + L L + L LQ L L N I+
Sbjct: 344 LFAEQAKIIQEVYLQNNSISVLNPQLFSNLDQLQALDLSMNQIT 387
Score = 74 (31.1 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 16/66 (24%), Positives = 36/66 (54%)
Query: 628 NNSDSRYVKLQATTIL-LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLED 686
N S ++ KL+ L +L++L++ HNQ ++ A ++ L +L HN++ L+
Sbjct: 406 NLSHNKLTKLEPEIFSDLYTLQILNLRHNQLENIAADTFAPMNNLHTLLLSHNKLKYLDA 465
Query: 687 HSFSNV 692
++ + +
Sbjct: 466 YALNGL 471
Score = 68 (29.0 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 16/51 (31%), Positives = 28/51 (54%)
Query: 644 LSSLKVLSIAHNQFSS--VRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L+ L ++ NQ +S + + GL +L L+ HN++ LE FS++
Sbjct: 373 LDQLQALDLSMNQITSTWIDKNTFVGLIRLVLLNLSHNKLTKLEPEIFSDL 423
Score = 65 (27.9 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 16/67 (23%), Positives = 36/67 (53%)
Query: 624 DINRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDV 683
D++ N S ++ + T + L L +L+++HN+ + + + L L L+ HNQ++
Sbjct: 380 DLSMNQITSTWID-KNTFVGLIRLVLLNLSHNKLTKLEPEIFSDLYTLQILNLRHNQLEN 438
Query: 684 LEDHSFS 690
+ +F+
Sbjct: 439 IAADTFA 445
Score = 56 (24.8 bits), Expect = 3.6e-19, Sum P(2) = 3.6e-19
Identities = 21/78 (26%), Positives = 36/78 (46%)
Query: 616 IPVAQQEDDINRNNSDSRYVKLQATTIL-LSSLKVLSIAHNQFSSVRRGALAGLDKLTSL 674
+P+ E I+ NN +V+L + L +L VL ++ + + +GL +L L
Sbjct: 857 VPMDTSELYIDGNN----FVELAGHSFLGRKNLAVLYANNSNVAHIYNTTFSGLKRLLIL 912
Query: 675 SCHHNQIDVLEDHSFSNV 692
N I LE + F N+
Sbjct: 913 HLEDNHIISLEGNEFHNL 930
Score = 54 (24.1 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 15/69 (21%), Positives = 30/69 (43%)
Query: 624 DINRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDV 683
D+N N + + V L + L+ + + N + + A GL L L N ++
Sbjct: 500 DLNLNGNQLKTVPLALRN--MRHLRTVDLGENMITVMEDSAFKGLGNLYGLRLIGNYLEN 557
Query: 684 LEDHSFSNV 692
+ H+F ++
Sbjct: 558 ITMHTFRDL 566
Score = 53 (23.7 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 14/48 (29%), Positives = 26/48 (54%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSN 691
+++L L ++HN+ + AL GL L+ LS +N + + +F N
Sbjct: 447 MNNLHTLLLSHNKLKYLDAYALNGLYVLSLLSLDNNALIGVHPDAFRN 494
Score = 47 (21.6 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 16/62 (25%), Positives = 26/62 (41%)
Query: 628 NNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDH 687
NNS+ ++ T L L +L + N S+ L+ L L N+I + +
Sbjct: 891 NNSNVAHI-YNTTFSGLKRLLILHLEDNHIISLEGNEFHNLENLRELYLQSNKIASIANG 949
Query: 688 SF 689
SF
Sbjct: 950 SF 951
Score = 42 (19.8 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 642 ILLSSLKVLSIAHNQFSSVRRGALAGLD 669
+ L S K+ SIA+ F +R+ + LD
Sbjct: 936 LYLQSNKIASIANGSFQMLRKLEVLRLD 963
Score = 38 (18.4 bits), Expect = 2.7e-17, Sum P(2) = 2.7e-17
Identities = 13/66 (19%), Positives = 30/66 (45%)
Query: 622 EDDINRNNSDSRYVKLQ--ATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 679
+ ++ D + +LQ + + +S+++L + N ++V LT + + N
Sbjct: 658 DSELKLQTLDVSFNQLQRIGPSSIPNSIELLFLNDNLITTVDPDTFMHKTNLTRVDLYAN 717
Query: 680 QIDVLE 685
QI L+
Sbjct: 718 QITTLD 723
Score = 38 (18.4 bits), Expect = 9.5e-12, Sum P(2) = 9.5e-12
Identities = 12/46 (26%), Positives = 20/46 (43%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
L +L L + N ++ L L L+ N+I V+E +F
Sbjct: 542 LGNLYGLRLIGNYLENITMHTFRDLPNLQILNLARNRIAVVEPGAF 587
Score = 38 (18.4 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 647 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
L +LS+ +N V A L L+ + NQ+
Sbjct: 474 LSLLSLDNNALIGVHPDAFRNCSALQDLNLNGNQL 508
>UNIPROTKB|P0C6S8 [details] [associations]
symbol:LINGO3 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 3" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
eggNOG:NOG278536 HOGENOM:HOG000246971 HOVERGEN:HBG057546
EMBL:AC004152 IPI:IPI00376131 RefSeq:NP_001094861.1
UniGene:Hs.371587 ProteinModelPortal:P0C6S8 SMR:P0C6S8
PhosphoSite:P0C6S8 DMDM:182662399 PRIDE:P0C6S8
Ensembl:ENST00000404279 GeneID:645191 KEGG:hsa:645191
UCSC:uc010dsx.1 CTD:645191 GeneCards:GC19M002289 H-InvDB:HIX0202769
HGNC:HGNC:21206 MIM:609792 neXtProt:NX_P0C6S8 PharmGKB:PA162394097
InParanoid:P0C6S8 OMA:EIDNWPL OrthoDB:EOG4THVSV GenomeRNAi:645191
NextBio:117179 Bgee:P0C6S8 CleanEx:HS_LINGO3 Genevestigator:P0C6S8
Uniprot:P0C6S8
Length = 592
Score = 260 (96.6 bits), Expect = 3.9e-19, P = 3.9e-19
Identities = 99/328 (30%), Positives = 150/328 (45%)
Query: 64 CACDLP-HTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVL-PGKFLEGVTLH 121
C C + + CT + L A+ + G+ + R LL+ + + + L PG L
Sbjct: 29 CECTVQTRAVACTRRR--LTAVPD---GIPAETR--LLELSRNRIRCLNPGDLAALPALE 81
Query: 122 GLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLY 181
L +S + ++ GAF L L+ L L N L ++P L NL LDLS N+L
Sbjct: 82 ELDLSENAIAHVEPGAFANLPR-LRVLRLRGNQLKLIPPGVFTRL-DNLTLLDLSENKLV 139
Query: 182 KLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRS 241
L + +F+ L SL L++ N L+ +S+ A L+ L L L+ LT +L LRS
Sbjct: 140 ILLDYTFQDLHSLRRLEVGDNDLVFVSRRAFAGLLALEELTLERCNLTALSGESLGHLRS 199
Query: 242 VTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAH-NQFSSVRRGALAGLDKLTSLSCHHNQ 300
+ L L H +A L RL L L I + V G+L GL+ LTSLS H
Sbjct: 200 LGALRLRHLAIAS-LEDQNFRRLPGLLHLEIDNWPLLEEVAAGSLRGLN-LTSLSVTHTN 257
Query: 301 IDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPL 360
I + + R + L+ L+L+HN I V S L L L L+ L + L
Sbjct: 258 ITAVPAAALRHQAHLTCLNLSHNPISTVPRGSFRDLVRLRELHLAGALLAVVEPQAFLGL 317
Query: 361 KSLQELRLDDNDISMEPECIYVGFNTMD 388
+ ++ L L +N +S E + NT++
Sbjct: 318 RQIRLLNLSNNLLSTLEESTFHSVNTLE 345
Score = 214 (80.4 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 80/295 (27%), Positives = 130/295 (44%)
Query: 88 LRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQA 147
L L E + L + +++V PG F L L + +LK I G F L + L
Sbjct: 74 LAALPALEELDLSENAIAHVE--PGAFANLPRLRVLRLRGNQLKLIPPGVFTRLDN-LTL 130
Query: 148 LGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTL 207
L L N L ++ L +L RL++ N L + +F GL +L L L L L
Sbjct: 131 LDLSENKLVILLDYTFQDLH-SLRRLEVGDNDLVFVSRRAFAGLLALEELTLERCNLTAL 189
Query: 208 SQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSL 267
S + L L +L LRL+ + + L + L++ + L + ++ L+ L
Sbjct: 190 SGESLGHLRSLGALRLRHLAIASLEDQNFRRLPGLLHLEIDNWPLLEEVAAGSLRGLN-L 248
Query: 268 KVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVA 327
LS+ H ++V AL LT L+ HN I + SFR L L L LA +
Sbjct: 249 TSLSVTHTNITAVPAAALRHQAHLTCLNLSHNPISTVPRGSFRDLVRLRELHLAGALLAV 308
Query: 328 VSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYV 382
V + L + L+LS+N L L + + +L+ LR+D N ++ + +++
Sbjct: 309 VEPQAFLGLRQIRLLNLSNNLLSTLEESTFHSVNTLETLRVDGNPLACDCRLLWI 363
>MGI|MGI:2685352 [details] [associations]
symbol:Podnl1 "podocan-like 1" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005576 "extracellular
region" evidence=IEA] [GO:0005578 "proteinaceous extracellular
matrix" evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2685352
GO:GO:0005578 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00600000084286
HSSP:P07359 HOVERGEN:HBG059195 OrthoDB:EOG42V8FX
HOGENOM:HOG000231119 CTD:79883 EMBL:DQ303463 EMBL:BC063764
IPI:IPI00420321 RefSeq:NP_001013402.2 UniGene:Mm.334654
ProteinModelPortal:Q6P3Y9 SMR:Q6P3Y9 PhosphoSite:Q6P3Y9
PRIDE:Q6P3Y9 Ensembl:ENSMUST00000093380 GeneID:244550
KEGG:mmu:244550 UCSC:uc012gha.1 InParanoid:Q6P3Y9 NextBio:386307
Bgee:Q6P3Y9 CleanEx:MM_PODNL1 Genevestigator:Q6P3Y9 Uniprot:Q6P3Y9
Length = 568
Score = 256 (95.2 bits), Expect = 4.2e-19, Sum P(2) = 4.2e-19
Identities = 107/337 (31%), Positives = 160/337 (47%)
Query: 68 LPHTLRCT-ANKSDLYAISESLRGLEPDER-VSLLDCTLSNVTVLPGKFLEGVTLHGLVI 125
LP +LR +++ I G +P R V L + L N + P F + L +
Sbjct: 136 LPRSLRVADLAANEVVEIFPLTFGEKPALRSVYLHNNRLRNTGLPPNTFHGSEVITTLSL 195
Query: 126 SSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYK--L 183
SS +L + L + L+ L L NNL+S VP AL+ L +L L L HNQL L
Sbjct: 196 SSNQLSYLPPS----LPASLERLHLQNNLISKVPRGALS-LQTHLRELYLQHNQLTDSGL 250
Query: 184 ENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVT 243
+ T+F LSSL +LDLS+N+L T+ + TL +L L N + L R +
Sbjct: 251 DATTFSKLSSLEYLDLSHNQLATVPEGLPG---TLTILHLGRNCIRHVEAVRLHKARGLR 307
Query: 244 DLDLSHNLLAGPLGPSTVPR--LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 301
L L HN LG S +P+ L L+ L H + + R A L +L HN +
Sbjct: 308 YLLLQHN----KLGASALPKGTLRPLRALHTLHLYGNKLERVPPALPRHLQALVMPHNHV 363
Query: 302 DVLEDHSFRALSTLSHLDLAHNRIVA--VSGASLAHLSNLTTLDLSHNFLRALTQDLITP 359
L + L+ L+LA+N + + V ++ L L +LDL+ N L L + L P
Sbjct: 364 AALGARDLVSARALAELNLAYNSLASAHVHPSAFRRLRALRSLDLAGNQLTRLPEGL--P 421
Query: 360 LKSLQELRLDDNDI-SMEPECIYVGFNTM-DLELIYS 394
SL+ LRL N + ++EPE + G N + +L L ++
Sbjct: 422 A-SLRSLRLQRNQLRTLEPEQL-AGLNKLRELNLAHN 456
Score = 211 (79.3 bits), Expect = 8.9e-14, P = 8.9e-14
Identities = 80/265 (30%), Positives = 129/265 (48%)
Query: 96 RVSLLDCTLSNVTVLPGKFLEGV-TLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNL 154
R LL + LP L + LH L + +L+ + L LQAL +P+N
Sbjct: 307 RYLLLQHNKLGASALPKGTLRPLRALHTLHLYGNKLERVPPA----LPRHLQALVMPHNH 362
Query: 155 LSVVPTSALAPLAPNLDRLDLSHNQLYK--LENTSFKGLSSLNFLDLSYNKLMTLSQDCL 212
++ + L A L L+L++N L + ++F+ L +L LDL+ N+L L +
Sbjct: 363 VAALGARDLVS-ARALAELNLAYNSLASAHVHPSAFRRLRALRSLDLAGNQLTRLPEGLP 421
Query: 213 APLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLL-AGPLGPSTVPRLSSLKVLS 271
A +LR LRLQ N+L L GL + +L+L+HN L G +GP T L +LKVL
Sbjct: 422 A---SLRSLRLQRNQLRTLEPEQLAGLNKLRELNLAHNRLRVGDIGPGTWHELQALKVLD 478
Query: 272 IAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI--VAVS 329
++HN+ S V L++L + N+I + +F + L L L NR+ ++
Sbjct: 479 LSHNELSFVPPDLPEALEELYLQA---NRISHVGPEAFLSTPHLRALFLRANRLHMTSIR 535
Query: 330 GASLAHLSNLTTLDLSHNFLRALTQ 354
+L L++L +D + N + L Q
Sbjct: 536 AEALQGLTHLRVVDTAENPEQVLVQ 560
Score = 204 (76.9 bits), Expect = 4.1e-12, Sum P(2) = 4.1e-12
Identities = 88/266 (33%), Positives = 124/266 (46%)
Query: 119 TLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHN 178
+L L +S +L + +G L L L L N + V L A L L L HN
Sbjct: 260 SLEYLDLSHNQLATVPEG----LPGTLTILHLGRNCIRHVEAVRLHK-ARGLRYLLLQHN 314
Query: 179 QL--YKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAAL 236
+L L + + L +L+ L L NKL + P L+ L + N + L
Sbjct: 315 KLGASALPKGTLRPLRALHTLHLYGNKLERVPP--ALPR-HLQALVMPHNHVAALGARDL 371
Query: 237 QGLRSVTDLDLSHNLLAGP-LGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLS 295
R++ +L+L++N LA + PS RL +L+ L +A NQ + + G A L SL
Sbjct: 372 VSARALAELNLAYNSLASAHVHPSAFRRLRALRSLDLAGNQLTRLPEGLPASL---RSLR 428
Query: 296 CHHNQIDVLEDHSFRALSTLSHLDLAHNRI-VAVSGASLAH-LSNLTTLDLSHNFLRALT 353
NQ+ LE L+ L L+LAHNR+ V G H L L LDLSHN L +
Sbjct: 429 LQRNQLRTLEPEQLAGLNKLRELNLAHNRLRVGDIGPGTWHELQALKVLDLSHNELSFVP 488
Query: 354 QDLITPLKSLQELRLDDNDIS-MEPE 378
DL P ++L+EL L N IS + PE
Sbjct: 489 PDL--P-EALEELYLQANRISHVGPE 511
Score = 129 (50.5 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 63/213 (29%), Positives = 96/213 (45%)
Query: 173 LDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMT--LSQDCLAPLVTLRVLRLQGNRLTV 230
L L +NQL +L LS L LDL N + + L + L L + N+L+V
Sbjct: 72 LSLQNNQLRELPYNELSRLSGLRTLDLHSNLITSEGLPDEAFESLNQLENFYVAHNKLSV 131
Query: 231 SVVAALQGL-RSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQF--SSVRRGALAG 287
A Q L RS+ DL+ N + + P T +L+ + + +N+ + + G
Sbjct: 132 ----APQFLPRSLRVADLAANEVV-EIFPLTFGEKPALRSVYLHNNRLRNTGLPPNTFHG 186
Query: 288 LDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHN 347
+ +T+LS NQ+ L S A +L L L +N I V +L+ ++L L L HN
Sbjct: 187 SEVITTLSLSSNQLSYLPP-SLPA--SLERLHLQNNLISKVPRGALSLQTHLRELYLQHN 243
Query: 348 FLRALTQDLIT--PLKSLQELRLDDNDISMEPE 378
L D T L SL+ L L N ++ PE
Sbjct: 244 QLTDSGLDATTFSKLSSLEYLDLSHNQLATVPE 276
Score = 69 (29.3 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 643 LLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDV 683
L +SL+ L + NQ ++ LAGL+KL L+ HN++ V
Sbjct: 420 LPASLRSLRLQRNQLRTLEPEQLAGLNKLRELNLAHNRLRV 460
Score = 49 (22.3 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L +L+ L +A NQ + + G A L SL NQ+ LE + +
Sbjct: 400 LRALRSLDLAGNQLTRLPEGLPASL---RSLRLQRNQLRTLEPEQLAGL 445
Score = 48 (22.0 bits), Expect = 4.2e-19, Sum P(2) = 4.2e-19
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKL 671
L +LKVL ++HN+ S V L++L
Sbjct: 471 LQALKVLDLSHNELSFVPPDLPEALEEL 498
Score = 37 (18.1 bits), Expect = 5.9e-18, Sum P(2) = 5.9e-18
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 647 LKVLSIAHNQF--SSVRRGALAGLDKLTSLSCHHNQIDVL 684
L+ L + N+ +S+R AL GL L + N VL
Sbjct: 519 LRALFLRANRLHMTSIRAEALQGLTHLRVVDTAENPEQVL 558
>UNIPROTKB|A0ENH4 [details] [associations]
symbol:TLR3 "Toll-like receptor 3" species:9823 "Sus
scrofa" [GO:0071260 "cellular response to mechanical stimulus"
evidence=IEA] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=IEA] [GO:0046330 "positive
regulation of JNK cascade" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045359 "positive regulation of interferon-beta
biosynthetic process" evidence=IEA] [GO:0045356 "positive
regulation of interferon-alpha biosynthetic process" evidence=IEA]
[GO:0045080 "positive regulation of chemokine biosynthetic process"
evidence=IEA] [GO:0045078 "positive regulation of interferon-gamma
biosynthetic process" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0043123 "positive regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA] [GO:0042346
"positive regulation of NF-kappaB import into nucleus"
evidence=IEA] [GO:0034346 "positive regulation of type III
interferon production" evidence=IEA] [GO:0034123 "positive
regulation of toll-like receptor signaling pathway" evidence=IEA]
[GO:0032760 "positive regulation of tumor necrosis factor
production" evidence=IEA] [GO:0032757 "positive regulation of
interleukin-8 production" evidence=IEA] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IEA] [GO:0032735
"positive regulation of interleukin-12 production" evidence=IEA]
[GO:0032728 "positive regulation of interferon-beta production"
evidence=IEA] [GO:0032722 "positive regulation of chemokine
production" evidence=IEA] [GO:0007252 "I-kappaB phosphorylation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0051607 "defense response
to virus" evidence=IEA] [GO:0050729 "positive regulation of
inflammatory response" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0034138 "toll-like receptor 3 signaling
pathway" evidence=IEA] [GO:0004888 "transmembrane signaling
receptor activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0002756 "MyD88-independent toll-like
receptor signaling pathway" evidence=IEA] InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 GO:GO:0016021 GO:GO:0005737
GO:GO:0006952 GO:GO:0043123 GO:GO:0046330 GO:GO:0045944
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0032722 GO:GO:0032755 GO:GO:0009615
GO:GO:0051092 GO:GO:0032757 GO:GO:0071260 InterPro:IPR000372
SMART:SM00013 GO:GO:0032760 GO:GO:0043330 GO:GO:0032735
GO:GO:0042346 GO:GO:0045078 GO:GO:0032728 GO:GO:0007252
GO:GO:0045080 SUPFAM:SSF52200 GO:GO:0045359
GeneTree:ENSGT00680000099674 GO:GO:0034123 CTD:7098
HOVERGEN:HBG023181 KO:K05401 PANTHER:PTHR24365:SF5 GO:GO:0045356
GO:GO:0034346 EMBL:CU466336 EMBL:DQ266435 EMBL:AB291812
RefSeq:NP_001090913.1 UniGene:Ssc.51668 STRING:A0ENH4
Ensembl:ENSSSCT00000017207 GeneID:100037937 KEGG:ssc:100037937
OMA:LNLGYNI Uniprot:A0ENH4
Length = 905
Score = 244 (91.0 bits), Expect = 5.9e-19, Sum P(2) = 5.9e-19
Identities = 86/275 (31%), Positives = 135/275 (49%)
Query: 114 FLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPN--LD 171
FL +L L +SS +++ S G F + L L L N LS T L N ++
Sbjct: 194 FLGNSSLKRLELSSNQIQEFSPGCFHAIGK-LFGLSLNNVKLSPSLTEKLCLELSNTSIE 252
Query: 172 RLDLSHNQLYKLENTSFKGL--SSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLT 229
L LS+ QLYK NT+F GL ++L+ LDLS+N L + D A L L+ L+ N +
Sbjct: 253 NLSLSNIQLYKTSNTTFFGLKQTNLSMLDLSHNSLSVIGNDSFAWLPHLKYFFLEYNNIE 312
Query: 230 VSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPR--------LSSLKVLSIAHNQFSSVR 281
+L GL +V L+L + + +++P+ L SL+ L++ N F ++
Sbjct: 313 RLSSRSLYGLSNVKYLNLRRSFTKQSISLASLPKIEDFSFQWLKSLEYLNMEDNNFPGIK 372
Query: 282 RGALAGLDKLTSLSCHHN--QIDVLEDHSFRAL--STLSHLDLAHNRIVAVSGASLAHLS 337
R GL KL SLS ++ + L + +F +L S L L+L N+I + + + L
Sbjct: 373 RNTFTGLIKLKSLSLSNSFSSLRTLTNETFISLADSPLLILNLTKNKISKIESGAFSWLG 432
Query: 338 NLTTLDLSHNFL-RALTQDLITPLKSLQELRLDDN 371
+L LDL N + + LT LK++ E+ L N
Sbjct: 433 HLKVLDLGLNEIGQELTGQEWRGLKNIVEVYLSYN 467
Score = 197 (74.4 bits), Expect = 8.2e-14, Sum P(2) = 8.2e-14
Identities = 88/302 (29%), Positives = 141/302 (46%)
Query: 111 PGKFLEGVTLHGLVISSGELK-NISDGAFIGLSSP-LQALGLPN-NLLSVVPTSALAPLA 167
PG F L GL +++ +L ++++ + LS+ ++ L L N L T+
Sbjct: 215 PGCFHAIGKLFGLSLNNVKLSPSLTEKLCLELSNTSIENLSLSNIQLYKTSNTTFFGLKQ 274
Query: 168 PNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGN- 226
NL LDLSHN L + N SF L L + L YN + LS L L ++ L L+ +
Sbjct: 275 TNLSMLDLSHNSLSVIGNDSFAWLPHLKYFFLEYNNIERLSSRSLYGLSNVKYLNLRRSF 334
Query: 227 -RLTVSVVA-------ALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFS 278
+ ++S+ + + Q L+S+ L++ N G + +T L LK LS++ N FS
Sbjct: 335 TKQSISLASLPKIEDFSFQWLKSLEYLNMEDNNFPG-IKRNTFTGLIKLKSLSLS-NSFS 392
Query: 279 SVR----RGALAGLDK-LTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI-VAVSGAS 332
S+R ++ D L L+ N+I +E +F L L LDL N I ++G
Sbjct: 393 SLRTLTNETFISLADSPLLILNLTKNKISKIESGAFSWLGHLKVLDLGLNEIGQELTGQE 452
Query: 333 LAHLSNLTTLDLSHNFLRALTQDLITPLKSLQEL---RLDDNDISMEPECIYVGFNTMDL 389
L N+ + LS+N LT D + SLQ+L R+ ++ P + FN L
Sbjct: 453 WRGLKNIVEVYLSYNRYLELTTDSFALVPSLQQLMLRRVALRNMDCSPSPFHPLFNLTIL 512
Query: 390 EL 391
+L
Sbjct: 513 DL 514
Score = 194 (73.4 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 74/277 (26%), Positives = 135/277 (48%)
Query: 118 VTLHGLVISSG--ELKNISDGAFIGLS-SPLQALGLPNNLLSVVPTSALAPLAPNLDRLD 174
+ L L +S+ L+ +++ FI L+ SPL L L N +S + + A + L +L LD
Sbjct: 380 IKLKSLSLSNSFSSLRTLTNETFISLADSPLLILNLTKNKISKIESGAFSWLG-HLKVLD 438
Query: 175 LSHNQL-YKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQ--GNRLTVS 231
L N++ +L ++GL ++ + LSYN+ + L+ D A + +L+ L L+ R
Sbjct: 439 LGLNEIGQELTGQEWRGLKNIVEVYLSYNRYLELTTDSFALVPSLQQLMLRRVALRNMDC 498
Query: 232 VVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGA------- 284
+ L ++T LDLS+N +A + + L L++L + HN + + + A
Sbjct: 499 SPSPFHPLFNLTILDLSNNNIAN-INDELLKGLEKLQILDLQHNNLARLWKHANPGGPVQ 557
Query: 285 -LAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLD 343
L GL L L+ N D + +FR LS L +DL N + + + + +L +L
Sbjct: 558 FLKGLSHLHILNLESNGFDEIPADAFRDLSELKSIDLGLNNLNILPPSVFDNQVSLKSLS 617
Query: 344 LSHNFLRALTQDLITPLKSLQELRLDDNDISMEP-EC 379
L N + ++ + + P + Q +L + D+ P +C
Sbjct: 618 LQKNLITSVKKTVFGP--AFQ--KLSNLDMRFNPFDC 650
Score = 174 (66.3 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 62/232 (26%), Positives = 103/232 (44%)
Query: 166 LAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQG 225
L N+ L+L+HNQL +L +F S L LD +N + L + L L +L LQ
Sbjct: 50 LPANITVLNLTHNQLRRLPPANFTIYSQLTTLDGGFNTISKLEPELCQSLPLLEILNLQH 109
Query: 226 NRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGAL 285
N L+ ++ +L L N + + + L +L L ++HN SS + G
Sbjct: 110 NELSQLSDKTFIFCMNLIELHLMSNSIQ-KIQNNPFKNLKNLIKLDLSHNGLSSTKLGTQ 168
Query: 286 AGLDKLTSLSCHHNQIDVL--EDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLD 343
L+ L L +N+I L E+ F S+L L+L+ N+I S + L L
Sbjct: 169 LQLENLQELLLANNKISALKREELDFLGNSSLKRLELSSNQIQEFSPGCFHAIGKLFGLS 228
Query: 344 LSHNFLR-ALTQDLITPLK--SLQELRLDDNDISMEPECIYVGFNTMDLELI 392
L++ L +LT+ L L S++ L L + + + G +L ++
Sbjct: 229 LNNVKLSPSLTEKLCLELSNTSIENLSLSNIQLYKTSNTTFFGLKQTNLSML 280
Score = 139 (54.0 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 62/219 (28%), Positives = 93/219 (42%)
Query: 97 VSLLDCTLSNV-TVLPGKFLEGV-TLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNL 154
+ +LD L+ + L G+ G+ + + +S ++ +F L LQ L L
Sbjct: 434 LKVLDLGLNEIGQELTGQEWRGLKNIVEVYLSYNRYLELTTDSF-ALVPSLQQLMLRRVA 492
Query: 155 LSVVPTSALAPLAP--NLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDC- 211
L + S +P P NL LDLS+N + + + KGL L LDL +N L L +
Sbjct: 493 LRNMDCSP-SPFHPLFNLTILDLSNNNIANINDELLKGLEKLQILDLQHNNLARLWKHAN 551
Query: 212 -------LAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRL 264
L L L +L L+ N A + L + +DL N L L PS
Sbjct: 552 PGGPVQFLKGLSHLHILNLESNGFDEIPADAFRDLSELKSIDLGLNNL-NILPPSVFDNQ 610
Query: 265 SSLKVLSIAHNQFSSVRRGALA-GLDKLTSLSCHHNQID 302
SLK LS+ N +SV++ KL++L N D
Sbjct: 611 VSLKSLSLQKNLITSVKKTVFGPAFQKLSNLDMRFNPFD 649
Score = 113 (44.8 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 33/117 (28%), Positives = 55/117 (47%)
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 317
P +P +++ VL++ HNQ + +LT+L N I LE ++L L
Sbjct: 47 PDDLP--ANITVLNLTHNQLRRLPPANFTIYSQLTTLDGGFNTISKLEPELCQSLPLLEI 104
Query: 318 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 374
L+L HN + +S + NL L L N ++ + + LK+L +L L N +S
Sbjct: 105 LNLQHNELSQLSDKTFIFCMNLIELHLMSNSIQKIQNNPFKNLKNLIKLDLSHNGLS 161
Score = 67 (28.6 bits), Expect = 5.9e-19, Sum P(2) = 5.9e-19
Identities = 14/45 (31%), Positives = 25/45 (55%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHS 688
L +L +L +++N +++ L GL+KL L HN + L H+
Sbjct: 506 LFNLTILDLSNNNIANINDELLKGLEKLQILDLQHNNLARLWKHA 550
Score = 64 (27.6 bits), Expect = 5.3e-11, Sum P(2) = 5.3e-11
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLS 675
L SL+ L++ N F ++R GL KL SLS
Sbjct: 355 LKSLEYLNMEDNNFPGIKRNTFTGLIKLKSLS 386
Score = 61 (26.5 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 14/50 (28%), Positives = 24/50 (48%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNVI 693
LS L +L++ N F + A L +L S+ N +++L F N +
Sbjct: 562 LSHLHILNLESNGFDEIPADAFRDLSELKSIDLGLNNLNILPPSVFDNQV 611
Score = 59 (25.8 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 23/73 (31%), Positives = 35/73 (47%)
Query: 624 DINRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGAL--AGLDKLTSLSCHHNQI 681
D++ N S KL T + L +L+ L +A+N+ S+++R L G L L NQI
Sbjct: 154 DLSHNGLSS--TKL-GTQLQLENLQELLLANNKISALKREELDFLGNSSLKRLELSSNQI 210
Query: 682 DVLEDHSFSNVIG 694
F + IG
Sbjct: 211 QEFSPGCF-HAIG 222
Score = 54 (24.1 bits), Expect = 5.7e-10, Sum P(2) = 5.7e-10
Identities = 20/73 (27%), Positives = 32/73 (43%)
Query: 626 NRNNSDSRYVKLQATTIL---LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID 682
N + S+ + K TT ++L +L ++HN S + + A L L +N I+
Sbjct: 253 NLSLSNIQLYKTSNTTFFGLKQTNLSMLDLSHNSLSVIGNDSFAWLPHLKYFFLEYNNIE 312
Query: 683 VLEDHSF---SNV 692
L S SNV
Sbjct: 313 RLSSRSLYGLSNV 325
Score = 49 (22.3 bits), Expect = 4.4e-17, Sum P(2) = 4.4e-17
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 646 SLKVLSIAHNQFSSVRRGALA-GLDKLTSLSCHHNQID 682
SLK LS+ N +SV++ KL++L N D
Sbjct: 612 SLKSLSLQKNLITSVKKTVFGPAFQKLSNLDMRFNPFD 649
Score = 49 (22.3 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 645 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
S L +L++ N+ S + GA + L L L N+I
Sbjct: 408 SPLLILNLTKNKISKIESGAFSWLGHLKVLDLGLNEI 444
Score = 43 (20.2 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 15/51 (29%), Positives = 24/51 (47%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAG--LDKLTSLSCHHNQIDVLEDHSFSNV 692
L L++L + HN + + + A G + L LS H I LE + F +
Sbjct: 530 LEKLQILDLQHNNLARLWKHANPGGPVQFLKGLS--HLHILNLESNGFDEI 578
>FB|FBgn0004364 [details] [associations]
symbol:18w "18 wheeler" species:7227 "Drosophila
melanogaster" [GO:0005886 "plasma membrane" evidence=ISS;IDA]
[GO:0004888 "transmembrane signaling receptor activity"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=IDA] [GO:0009653
"anatomical structure morphogenesis" evidence=IMP] [GO:0006955
"immune response" evidence=IEP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0019731 "antibacterial humoral response"
evidence=NAS;IMP;TAS] [GO:0048598 "embryonic morphogenesis"
evidence=TAS] [GO:0006952 "defense response" evidence=TAS]
[GO:0007165 "signal transduction" evidence=IEA;ISS] [GO:0016021
"integral to membrane" evidence=ISS] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0019730 "antimicrobial
humoral response" evidence=IMP] InterPro:IPR000157
InterPro:IPR001611 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 GO:GO:0016021 GO:GO:0005886 GO:GO:0005737
GO:GO:0048598 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007155 GO:GO:0019731 InterPro:IPR000372
SMART:SM00013 GO:GO:0004888 InterPro:IPR026906 Pfam:PF13306
SUPFAM:SSF52200 FlyBase:FBgn0004364 EMBL:L23171 PIR:T13852
PIR:T13887 HSSP:O60603 ProteinModelPortal:Q24591 STRING:Q24591
PRIDE:Q24591 InParanoid:Q24591 ArrayExpress:Q24591 Bgee:Q24591
Uniprot:Q24591
Length = 1389
Score = 254 (94.5 bits), Expect = 6.6e-19, Sum P(2) = 6.6e-19
Identities = 90/303 (29%), Positives = 135/303 (44%)
Query: 79 SDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAF 138
S+L+ ++R L S+ L N+T + E + + + L N ++GA
Sbjct: 148 SELHLGDNNIRQLPEGVWCSMPSLQLLNLTQNRIRSAEFLGFSEKLCAGSALSN-ANGAV 206
Query: 139 IGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLD 198
G S LQ L + N L +P + A L L L HN + L + GLSSL L+
Sbjct: 207 SG-GSELQTLDVSFNELRSLPDAWGASRLRRLQTLSLQHNNISTLAPNALAGLSSLRVLN 265
Query: 199 LSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGP-LG 257
+SYN L++L + A LR L LQGN L L L + LDLS N L +
Sbjct: 266 ISYNHLVSLPSEAFAGNKELRELHLQGNDLYELPKGLLHRLEQLLVLDLSGNQLTSHHVD 325
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 317
ST L L VL++++N + + L L L +N I +E+ +F L L
Sbjct: 326 NSTFAGLIRLIVLNLSNNALTRIGSKTFKELYFLQILDMRNNSIGHIEEGAFLPLYNLHT 385
Query: 318 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEP 377
L+LA NR+ + L LT L L++N + + L+EL L N ++ P
Sbjct: 386 LNLAENRLHTLDNRIFNGLYVLTKLTLNNNLVSIVESQAFRNCSDLKELDLSSNQLTEVP 445
Query: 378 ECI 380
E +
Sbjct: 446 EAV 448
Score = 227 (85.0 bits), Expect = 6.4e-15, Sum P(2) = 6.4e-15
Identities = 75/253 (29%), Positives = 117/253 (46%)
Query: 123 LVISSGELKN--ISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQL 180
L +S +L + + + F GL L L L NN L+ + + L L LD+ +N +
Sbjct: 312 LDLSGNQLTSHHVDNSTFAGLIR-LIVLNLSNNALTRIGSKTFKELY-FLQILDMRNNSI 369
Query: 181 YKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLR 240
+E +F L +L+ L+L+ N+L TL L L L L N +++ A +
Sbjct: 370 GHIEEGAFLPLYNLHTLNLAENRLHTLDNRIFNGLYVLTKLTLNNNLVSIVESQAFRNCS 429
Query: 241 SVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQ 300
+ +LDLS N L P V LS LK L + NQ S + L++LT L N+
Sbjct: 430 DLKELDLSSNQLTEV--PEAVQDLSMLKTLDLGENQISEFKNNTFRNLNQLTGLRLIDNR 487
Query: 301 IDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPL 360
I + F+ L LS L+LA NRI ++ + + + + L NFL + + L
Sbjct: 488 IGNITVGMFQDLPRLSVLNLAKNRIQSIERGAFDKNTEIEAIRLDKNFLTDIN-GIFATL 546
Query: 361 KSLQELRLDDNDI 373
SL L L +N +
Sbjct: 547 ASLLWLNLSENHL 559
Score = 191 (72.3 bits), Expect = 5.0e-11, Sum P(2) = 5.0e-11
Identities = 78/261 (29%), Positives = 125/261 (47%)
Query: 97 VSLLDCTLSN--VTVLPGK-FLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNN 153
+ L+ LSN +T + K F E L L + + + +I +GAF+ L + L L L N
Sbjct: 333 IRLIVLNLSNNALTRIGSKTFKELYFLQILDMRNNSIGHIEEGAFLPLYN-LHTLNLAEN 391
Query: 154 LLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLA 213
L + L L +L L++N + +E+ +F+ S L LDLS N+L T + +
Sbjct: 392 RLHTLDNRIFNGLYV-LTKLTLNNNLVSIVESQAFRNCSDLKELDLSSNQL-TEVPEAVQ 449
Query: 214 PLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIA 273
L L+ L L N+++ + L +T L L N + G + L L VL++A
Sbjct: 450 DLSMLKTLDLGENQISEFKNNTFRNLNQLTGLRLIDNRI-GNITVGMFQDLPRLSVLNLA 508
Query: 274 HNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHS--FRALSTLSHLDLAHNRIVAVSGA 331
N+ S+ RGA DK T + + L D + F L++L L+L+ N +V A
Sbjct: 509 KNRIQSIERGAF---DKNTEIEAIRLDKNFLTDINGIFATLASLLWLNLSENHLVWFDYA 565
Query: 332 SLAHLSNLTTLDLSHNFLRAL 352
+ SNL LD+ N++ AL
Sbjct: 566 FIP--SNLKWLDIHGNYIEAL 584
Score = 173 (66.0 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 82/300 (27%), Positives = 131/300 (43%)
Query: 97 VSLLDCTLSNVTVL--PGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNL 154
+SL TL + + PGK LE LHG LK +S+ +G ++ Q LP +
Sbjct: 114 MSLKRLTLESHNAVWGPGKTLE---LHGQSFQG--LKELSE-LHLGDNNIRQ---LPEGV 164
Query: 155 LSVVPTSALAPLAPNLDR----LDLSHN----QLYKLENTSFKGLSSLNFLDLSYNKLMT 206
+P+ L L N R L S N + G S L LD+S+N+L +
Sbjct: 165 WCSMPSLQLLNLTQNRIRSAEFLGFSEKLCAGSALSNANGAVSGGSELQTLDVSFNELRS 224
Query: 207 LSQDCLAP-LVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLS 265
L A L L+ L LQ N ++ AL GL S+ L++S+N L L
Sbjct: 225 LPDAWGASRLRRLQTLSLQHNNISTLAPNALAGLSSLRVLNISYNHLVS-LPSEAFAGNK 283
Query: 266 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDV--LEDHSFRALSTLSHLDLAHN 323
L+ L + N + +G L L++L L NQ+ +++ +F L L L+L++N
Sbjct: 284 ELRELHLQGNDLYELPKGLLHRLEQLLVLDLSGNQLTSHHVDNSTFAGLIRLIVLNLSNN 343
Query: 324 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVG 383
+ + + L L LD+ +N + + + PL +L L L +N + I+ G
Sbjct: 344 ALTRIGSKTFKELYFLQILDMRNNSIGHIEEGAFLPLYNLHTLNLAENRLHTLDNRIFNG 403
Score = 155 (59.6 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 75/272 (27%), Positives = 114/272 (41%)
Query: 111 PGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPN- 169
PG F + L L I + +L+ + AF GL S L+ L L ++ P L +
Sbjct: 83 PGLFRQLQKLSELRIDACKLQRVPPNAFEGLMS-LKRLTLESHNAVWGPGKTLELHGQSF 141
Query: 170 -----LDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQ 224
L L L N + +L + + SL L+L+ N++ + A +
Sbjct: 142 QGLKELSELHLGDNNIRQLPEGVWCSMPSLQLLNLTQNRIRS------AEFLGFSEKLCA 195
Query: 225 GNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGA 284
G+ L+ + A+ G + LD+S N L RL L+ LS+ HN S++ A
Sbjct: 196 GSALS-NANGAVSGGSELQTLDVSFNELRSLPDAWGASRLRRLQTLSLQHNNISTLAPNA 254
Query: 285 LAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDL 344
LAGL L L+ +N + L +F L L L N + + L L L LDL
Sbjct: 255 LAGLSSLRVLNISYNHLVSLPSEAFAGNKELRELHLQGNDLYELPKGLLHRLEQLLVLDL 314
Query: 345 SHNFLRALTQDLIT--PLKSLQELRLDDNDIS 374
S N L + D T L L L L +N ++
Sbjct: 315 SGNQLTSHHVDNSTFAGLIRLIVLNLSNNALT 346
Score = 155 (59.6 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 51/153 (33%), Positives = 74/153 (48%)
Query: 98 SLLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSV 157
+++DC ++ LP + + V+ L + + + G G + L+AL L + L
Sbjct: 774 NIVDCGRQDLAALPNRIPQDVS--DLYLDGNNMPELEVGHLTGRRN-LRALYLNASNLMT 830
Query: 158 VPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVT 217
+ +LA L NL L L +N+L LE T F+ L L L L N L +S PLV+
Sbjct: 831 LQNGSLAQLV-NLRVLHLENNKLTALEGTEFRSLGLLRELYLHNNMLTHISNATFEPLVS 889
Query: 218 LRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHN 250
L VLRL NRL S + LQ S+ L L N
Sbjct: 890 LEVLRLDNNRL--SSLPHLQYRHSLQGLTLGRN 920
Score = 146 (56.5 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 66/277 (23%), Positives = 119/277 (42%)
Query: 100 LDCTLSNVTVLPGKFLEGV-TLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVV 158
L+ + + L + G+ L L +++ + + AF S L+ L L +N L+ V
Sbjct: 386 LNLAENRLHTLDNRIFNGLYVLTKLTLNNNLVSIVESQAFRNCSD-LKELDLSSNQLTEV 444
Query: 159 PTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTL 218
P A+ L+ L LDL NQ+ + +N +F+ L+ L L L N++ ++ L L
Sbjct: 445 P-EAVQDLSM-LKTLDLGENQISEFKNNTFRNLNQLTGLRLIDNRIGNITVGMFQDLPRL 502
Query: 219 RVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFS 278
VL L NR+ A + + L N L G L+SL L+++ N
Sbjct: 503 SVLNLAKNRIQSIERGAFDKNTEIEAIRLDKNFLTDING--IFATLASLLWLNLSENHLV 560
Query: 279 SVRRGALAGLDKLTSLSCHHNQIDVLEDH-SFRALSTLSHLDLAHNRIVAVSGASLAHLS 337
+ L L H N I+ L ++ + ++ LD +HNRI + S+ +
Sbjct: 561 WFDYAFIPS--NLKWLDIHGNYIEALGNYYKLQEEIRVTTLDASHNRITEIGAMSVPN-- 616
Query: 338 NLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 374
++ L +++N + + + L + L N +S
Sbjct: 617 SIELLFINNNIIGQIQANTFVDKTRLARVDLYANVLS 653
Score = 134 (52.2 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 49/147 (33%), Positives = 74/147 (50%)
Query: 161 SALAPLAP-NLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLR 219
+AL P ++ L L N + +LE G +L L L+ + LMTL LA LV LR
Sbjct: 784 AALPNRIPQDVSDLYLDGNNMPELEVGHLTGRRNLRALYLNASNLMTLQNGSLAQLVNLR 843
Query: 220 VLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSS 279
VL L+ N+LT + L + +L L +N+L + +T L SL+VL + +N+ SS
Sbjct: 844 VLHLENNKLTALEGTEFRSLGLLRELYLHNNMLTH-ISNATFEPLVSLEVLRLDNNRLSS 902
Query: 280 VR----RGALAGLDK-LTSLSCHHNQI 301
+ R +L GL + SC Q+
Sbjct: 903 LPHLQYRHSLQGLTLGRNAWSCRCQQL 929
Score = 71 (30.1 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 18/65 (27%), Positives = 36/65 (55%)
Query: 627 RNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLED 686
RNNS +++ + + L +L L++A N+ ++ GL LT L+ ++N + ++E
Sbjct: 365 RNNSIG-HIE-EGAFLPLYNLHTLNLAENRLHTLDNRIFNGLYVLTKLTLNNNLVSIVES 422
Query: 687 HSFSN 691
+F N
Sbjct: 423 QAFRN 427
Score = 63 (27.2 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 21/65 (32%), Positives = 33/65 (50%)
Query: 628 NNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDH 687
NN+ V+ QA S LK L ++ NQ + V A+ L L +L NQI +++
Sbjct: 413 NNNLVSIVESQAFRNC-SDLKELDLSSNQLTEVPE-AVQDLSMLKTLDLGENQISEFKNN 470
Query: 688 SFSNV 692
+F N+
Sbjct: 471 TFRNL 475
Score = 61 (26.5 bits), Expect = 6.6e-19, Sum P(2) = 6.6e-19
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
LS LK L + NQ S + L++LT L N+I
Sbjct: 451 LSMLKTLDLGENQISEFKNNTFRNLNQLTGLRLIDNRI 488
Score = 51 (23.0 bits), Expect = 7.2e-18, Sum P(2) = 7.2e-18
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSL 674
L L VL++A N+ S+ RGA DK T +
Sbjct: 499 LPRLSVLNLAKNRIQSIERGAF---DKNTEI 526
Score = 51 (23.0 bits), Expect = 7.2e-18, Sum P(2) = 7.2e-18
Identities = 14/63 (22%), Positives = 32/63 (50%)
Query: 632 SRYVKLQATTIL-LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFS 690
S + LQ ++ L +L+VL + +N+ +++ L L L H+N + + + +F
Sbjct: 826 SNLMTLQNGSLAQLVNLRVLHLENNKLTALEGTEFRSLGLLRELYLHNNMLTHISNATFE 885
Query: 691 NVI 693
++
Sbjct: 886 PLV 888
Score = 49 (22.3 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 12/47 (25%), Positives = 25/47 (53%)
Query: 646 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
+L+ L + + +++ G+LA L L L +N++ LE F ++
Sbjct: 817 NLRALYLNASNLMTLQNGSLAQLVNLRVLHLENNKLTALEGTEFRSL 863
>UNIPROTKB|Q6NUI6 [details] [associations]
symbol:CHADL "Chondroadherin-like protein" species:9606
"Homo sapiens" [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] [GO:0031012 "extracellular matrix" evidence=ISS]
InterPro:IPR001611 PROSITE:PS51450 EMBL:CH471095 GO:GO:0005578
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 SMART:SM00013 EMBL:AL035681 EMBL:BC012882
EMBL:BC019839 EMBL:BC040188 EMBL:BC048421 EMBL:BC068590
IPI:IPI00402280 IPI:IPI00855816 RefSeq:NP_612490.1
UniGene:Hs.344488 HSSP:Q9BZR6 ProteinModelPortal:Q6NUI6 SMR:Q6NUI6
DMDM:158563972 PaxDb:Q6NUI6 PRIDE:Q6NUI6 Ensembl:ENST00000216241
GeneID:150356 KEGG:hsa:150356 UCSC:uc003azq.4 UCSC:uc010gyj.3
CTD:150356 GeneCards:GC22M041625 HGNC:HGNC:25165 HPA:HPA005696
HPA:HPA024654 neXtProt:NX_Q6NUI6 PharmGKB:PA162382224
eggNOG:NOG318740 HOGENOM:HOG000111626 HOVERGEN:HBG095510
InParanoid:Q6NUI6 OMA:ICDNSRR GenomeRNAi:150356 NextBio:86414
ArrayExpress:Q6NUI6 Bgee:Q6NUI6 CleanEx:HS_CHADL
Genevestigator:Q6NUI6 Uniprot:Q6NUI6
Length = 762
Score = 243 (90.6 bits), Expect = 6.9e-19, Sum P(2) = 6.9e-19
Identities = 75/232 (32%), Positives = 105/232 (45%)
Query: 146 QALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLM 205
Q L L NLL V+P +A + P+L LDL H ++ + +F+GL L L+L+ N L
Sbjct: 65 QRLDLQGNLLKVIPAAAFQGV-PHLTHLDLRHCEVELVAEGAFRGLGRLLLLNLASNHLR 123
Query: 206 TLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLS 265
L Q+ L L +LR L L+GN L L ++ L+L+HN L L L
Sbjct: 124 ELPQEALDGLGSLRRLELEGNALEELRPGTFGALGALATLNLAHNALVY-LPAMAFQGLL 182
Query: 266 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 325
++ L ++HN S + ALAGL L LS HHN++ L L+ L+L HN +
Sbjct: 183 RVRWLRLSHNALSVLAPEALAGLPALRRLSLHHNELQALPGPVLSQARGLARLELGHNPL 242
Query: 326 VAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEP 377
L L L L L+AL L L L N + P
Sbjct: 243 TYAGEEDGLALPGLRELLLDGGALQALGPRAFAHCPRLHTLDLRGNQLDTLP 294
Score = 222 (83.2 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 67/203 (33%), Positives = 95/203 (46%)
Query: 168 PNL-DRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGN 226
P L RLDL N L + +F+G+ L LDL + ++ +++ L L +L L N
Sbjct: 61 PELTQRLDLQGNLLKVIPAAAFQGVPHLTHLDLRHCEVELVAEGAFRGLGRLLLLNLASN 120
Query: 227 RLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALA 286
L AL GL S+ L+L N L L P T L +L L++AHN + A
Sbjct: 121 HLRELPQEALDGLGSLRRLELEGNALE-ELRPGTFGALGALATLNLAHNALVYLPAMAFQ 179
Query: 287 GLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSH 346
GL ++ L HN + VL + L L L L HN + A+ G L+ L L+L H
Sbjct: 180 GLLRVRWLRLSHNALSVLAPEALAGLPALRRLSLHHNELQALPGPVLSQARGLARLELGH 239
Query: 347 NFLRALTQDLITPLKSLQELRLD 369
N L ++ L L+EL LD
Sbjct: 240 NPLTYAGEEDGLALPGLRELLLD 262
Score = 192 (72.6 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 56/164 (34%), Positives = 81/164 (49%)
Query: 214 PLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIA 273
P +T R L LQGN L V AA QG+ +T LDL H + + L L +L++A
Sbjct: 61 PELTQR-LDLQGNLLKVIPAAAFQGVPHLTHLDLRHCEVE-LVAEGAFRGLGRLLLLNLA 118
Query: 274 HNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASL 333
N + + AL GL L L N ++ L +F AL L+ L+LAHN +V + +
Sbjct: 119 SNHLRELPQEALDGLGSLRRLELEGNALEELRPGTFGALGALATLNLAHNALVYLPAMAF 178
Query: 334 AHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEP 377
L + L LSHN L L + + L +L+ L L N++ P
Sbjct: 179 QGLLRVRWLRLSHNALSVLAPEALAGLPALRRLSLHHNELQALP 222
Score = 174 (66.3 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 70/240 (29%), Positives = 104/240 (43%)
Query: 140 GLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDL 199
G S Q L L N VP +A L +L L L H + +LE + GL L +L L
Sbjct: 422 GFPSDTQLLDLRRNHFPSVPRAAFPGLG-HLVSLHLQHCGIAELEAGALAGLGRLIYLYL 480
Query: 200 SYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPS 259
S N+L LS L L L L+ NR AAL+ L S+ L L N + L P
Sbjct: 481 SDNQLAGLSAAALEGAPRLGYLYLERNRFLQVPGAALRALPSLFSLHLQDNAV-DRLAPG 539
Query: 260 TVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 319
+ R +L+ + ++ N+ + V GAL +L L NQ+ + + L L L
Sbjct: 540 DLGRTRALRWVYLSGNRITEVSLGALGPARELEKLHLDRNQLREVPTGALEGLPALLELQ 599
Query: 320 LAHNRIVAVSGASLAHLS-NLTTLDLSHNFLRALTQDLITPL-KSLQELRLDDNDISMEP 377
L+ N + A+ + + +L L L+ + L + + L LQ L L N + P
Sbjct: 600 LSGNPLRALRDGAFQPVGRSLQHLFLNSSGLEQICPGAFSGLGPGLQSLHLQKNQLRALP 659
Score = 165 (63.1 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 80/288 (27%), Positives = 126/288 (43%)
Query: 64 CACDLPHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVT-LHG 122
C C +P + + L A+ RG D + LLD ++ +P G+ L
Sbjct: 400 CVC-VPESRHSSCEGCGLQAVP---RGFPSDTQ--LLDLRRNHFPSVPRAAFPGLGHLVS 453
Query: 123 LVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYK 182
L + + + GA GL L L L +N L+ + +AL AP L L L N+ +
Sbjct: 454 LHLQHCGIAELEAGALAGLGR-LIYLYLSDNQLAGLSAAALEG-APRLGYLYLERNRFLQ 511
Query: 183 LENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSV 242
+ + + L SL L L N + L+ L LR + L GNR+T + AL R +
Sbjct: 512 VPGAALRALPSLFSLHLQDNAVDRLAPGDLGRTRALRWVYLSGNRITEVSLGALGPAREL 571
Query: 243 TDLDLSHNLLAG-PLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDK-LTSLSCHHNQ 300
L L N L P G + L +L L ++ N ++R GA + + L L + +
Sbjct: 572 EKLHLDRNQLREVPTG--ALEGLPALLELQLSGNPLRALRDGAFQPVGRSLQHLFLNSSG 629
Query: 301 IDVLEDHSFRALST-LSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHN 347
++ + +F L L L L N++ A+ +L LS L +DLS N
Sbjct: 630 LEQICPGAFSGLGPGLQSLHLQKNQLRALP--ALPSLSQLELIDLSSN 675
Score = 154 (59.3 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 51/182 (28%), Positives = 82/182 (45%)
Query: 197 LDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPL 256
LDL N L + + L L L+ + + A +GL + L+L+ N L L
Sbjct: 67 LDLQGNLLKVIPAAAFQGVPHLTHLDLRHCEVELVAEGAFRGLGRLLLLNLASNHLR-EL 125
Query: 257 GPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLS 316
+ L SL+ L + N +R G L L +L+ HN + L +F+ L +
Sbjct: 126 PQEALDGLGSLRRLELEGNALEELRPGTFGALGALATLNLAHNALVYLPAMAFQGLLRVR 185
Query: 317 HLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISME 376
L L+HN + ++ +LA L L L L HN L+AL +++ + L L L N ++
Sbjct: 186 WLRLSHNALSVLAPEALAGLPALRRLSLHHNELQALPGPVLSQARGLARLELGHNPLTYA 245
Query: 377 PE 378
E
Sbjct: 246 GE 247
Score = 130 (50.8 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 56/202 (27%), Positives = 90/202 (44%)
Query: 79 SDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGV-TLHGLVISSGELKNISDGA 137
SD S LE R+ L + +PG L + +L L + + ++ G
Sbjct: 481 SDNQLAGLSAAALEGAPRLGYLYLERNRFLQVPGAALRALPSLFSLHLQDNAVDRLAPGD 540
Query: 138 FIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFL 197
+G + L+ + L N ++ V AL P A L++L L NQL ++ + +GL +L L
Sbjct: 541 -LGRTRALRWVYLSGNRITEVSLGALGP-ARELEKLHLDRNQLREVPTGALEGLPALLEL 598
Query: 198 DLSYNKLMTLSQDCLAPLV-TLRVLRLQGNRLTVSVVAALQGLR-SVTDLDLSHNLLAGP 255
LS N L L P+ +L+ L L + L A GL + L L N L
Sbjct: 599 QLSGNPLRALRDGAFQPVGRSLQHLFLNSSGLEQICPGAFSGLGPGLQSLHLQKNQLRAL 658
Query: 256 LGPSTVPRLSSLKVLSIAHNQF 277
P+ +P LS L+++ ++ N F
Sbjct: 659 --PA-LPSLSQLELIDLSSNPF 677
Score = 126 (49.4 bits), Expect = 1.6e-09, Sum P(3) = 1.6e-09
Identities = 42/127 (33%), Positives = 56/127 (44%)
Query: 249 HNLLAGPLGPSTVPR--LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLED 306
H+ G G VPR S ++L + N F SV R A GL L SL H I LE
Sbjct: 408 HSSCEG-CGLQAVPRGFPSDTQLLDLRRNHFPSVPRAAFPGLGHLVSLHLQHCGIAELEA 466
Query: 307 HSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQEL 366
+ L L +L L+ N++ +S A+L L L L N + + L SL L
Sbjct: 467 GALAGLGRLIYLYLSDNQLAGLSAAALEGAPRLGYLYLERNRFLQVPGAALRALPSLFSL 526
Query: 367 RLDDNDI 373
L DN +
Sbjct: 527 HLQDNAV 533
Score = 126 (49.4 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 48/177 (27%), Positives = 76/177 (42%)
Query: 219 RVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFS 278
++L L+ N AA GL + L L H +A L + L L L ++ NQ +
Sbjct: 428 QLLDLRRNHFPSVPRAAFPGLGHLVSLHLQHCGIA-ELEAGALAGLGRLIYLYLSDNQLA 486
Query: 279 SVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSN 338
+ AL G +L L N+ + + RAL +L L L N + ++ L
Sbjct: 487 GLSAAALEGAPRLGYLYLERNRFLQVPGAALRALPSLFSLHLQDNAVDRLAPGDLGRTRA 546
Query: 339 LTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELIYSG 395
L + LS N + ++ + P + L++L LD N + P G + LEL SG
Sbjct: 547 LRWVYLSGNRITEVSLGALGPARELEKLHLDRNQLREVPTGALEGLPAL-LELQLSG 602
Score = 121 (47.7 bits), Expect = 5.6e-09, Sum P(3) = 5.6e-09
Identities = 45/143 (31%), Positives = 65/143 (45%)
Query: 234 AALQGLRSVTDL-DLSHNLLAGPLGP-STVPRLSSLKVLSIAHNQFSSVRRGALAGLDKL 291
A +G S T L DL N P P + P L L L + H + + GALAGL +L
Sbjct: 418 AVPRGFPSDTQLLDLRRNHF--PSVPRAAFPGLGHLVSLHLQHCGIAELEAGALAGLGRL 475
Query: 292 TSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRA 351
L NQ+ L + L +L L NR + V GA+L L +L +L L N +
Sbjct: 476 IYLYLSDNQLAGLSAAALEGAPRLGYLYLERNRFLQVPGAALRALPSLFSLHLQDNAVDR 535
Query: 352 LTQDLITPLKSLQELRLDDNDIS 374
L + ++L+ + L N I+
Sbjct: 536 LAPGDLGRTRALRWVYLSGNRIT 558
Score = 78 (32.5 bits), Expect = 1.6e-09, Sum P(3) = 1.6e-09
Identities = 48/155 (30%), Positives = 70/155 (45%)
Query: 76 ANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGV-TLHGLVISSGELKNIS 134
A+ + +Y + + +GL RV L + + ++VL + L G+ L L + EL+ +
Sbjct: 166 AHNALVYLPAMAFQGLL---RVRWLRLSHNALSVLAPEALAGLPALRRLSLHHNELQALP 222
Query: 135 DGAFIGLSSPLQALGLPNNLLSVV-PTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSS 193
G + + L L L +N L+ LA P L L L L L +F
Sbjct: 223 -GPVLSQARGLARLELGHNPLTYAGEEDGLA--LPGLRELLLDGGALQALGPRAFAHCPR 279
Query: 194 LNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRL 228
L+ LDL N+L TL L LR LRLQGN L
Sbjct: 280 LHTLDLRGNQLDTLPP--LQGPGQLRRLRLQGNPL 312
Score = 65 (27.9 bits), Expect = 6.9e-19, Sum P(2) = 6.9e-19
Identities = 17/41 (41%), Positives = 20/41 (48%)
Query: 645 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLE 685
S ++L + N F SV R A GL L SL H I LE
Sbjct: 425 SDTQLLDLRRNHFPSVPRAAFPGLGHLVSLHLQHCGIAELE 465
Score = 63 (27.2 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 17/46 (36%), Positives = 21/46 (45%)
Query: 647 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L+ L + NQ V GAL GL L L N + L D +F V
Sbjct: 571 LEKLHLDRNQLREVPTGALEGLPALLELQLSGNPLRALRDGAFQPV 616
Score = 53 (23.7 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
L L L + H + + GALAGL +L L NQ+
Sbjct: 448 LGHLVSLHLQHCGIAELEAGALAGLGRLIYLYLSDNQL 485
Score = 51 (23.0 bits), Expect = 2.0e-17, Sum P(2) = 2.0e-17
Identities = 18/56 (32%), Positives = 24/56 (42%)
Query: 630 SDSRYVKLQATTIL-LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL 684
SD++ L A + L L + N+F V AL L L SL N +D L
Sbjct: 481 SDNQLAGLSAAALEGAPRLGYLYLERNRFLQVPGAALRALPSLFSLHLQDNAVDRL 536
Score = 44 (20.5 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
L +L+ LS+ HN+ ++ L+ L L HN +
Sbjct: 205 LPALRRLSLHHNELQALPGPVLSQARGLARLELGHNPL 242
Score = 40 (19.1 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 10/36 (27%), Positives = 19/36 (52%)
Query: 646 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
+L+ + ++ N+ + V GAL +L L NQ+
Sbjct: 546 ALRWVYLSGNRITEVSLGALGPARELEKLHLDRNQL 581
Score = 40 (19.1 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 636 KLQATTIL-LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQ 680
+L+A + L L L ++ NQ + + AL G +L L N+
Sbjct: 463 ELEAGALAGLGRLIYLYLSDNQLAGLSAAALEGAPRLGYLYLERNR 508
>RGD|2724 [details] [associations]
symbol:Gp5 "glycoprotein V (platelet)" species:10116 "Rattus
norvegicus" [GO:0005518 "collagen binding" evidence=IEA;ISO]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007160 "cell-matrix
adhesion" evidence=IEA;ISO] [GO:0007596 "blood coagulation"
evidence=IEA] [GO:0009986 "cell surface" evidence=IDA] [GO:0010544
"negative regulation of platelet activation" evidence=IEA;ISO]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 RGD:2724 GO:GO:0016021 GO:GO:0009986 GO:GO:0007596
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007160 InterPro:IPR000372 SMART:SM00013
GO:GO:0010544 CTD:2814 HOGENOM:HOG000112798 HOVERGEN:HBG005906
KO:K06260 OrthoDB:EOG4JHCFD EMBL:Z69594 IPI:IPI00195678
RefSeq:NP_036927.1 UniGene:Rn.138111 ProteinModelPortal:O08770
STRING:O08770 PRIDE:O08770 GeneID:25259 KEGG:rno:25259 UCSC:RGD:2724
InParanoid:O08770 NextBio:605903 Genevestigator:O08770
GermOnline:ENSRNOG00000038540 Uniprot:O08770
Length = 567
Score = 256 (95.2 bits), Expect = 9.7e-19, P = 9.7e-19
Identities = 81/253 (32%), Positives = 115/253 (45%)
Query: 96 RVSLLDCTLSNVTVLPGKFLEG-VTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNL 154
++ +LD + +N+T LP L + L L++ S L ++ G L + L L L N
Sbjct: 171 KLKVLDLSRNNLTHLPQGLLGAQIKLEKLLLYSNRLMSLDSGLLANLGA-LTELRLERNH 229
Query: 155 LSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAP 214
L + A L NL L LS N L L F +S L L L N L L +
Sbjct: 230 LRSIAPGAFDSLG-NLSTLTLSGNLLESLPPALFLHVSWLTRLTLFENPLEELPEVLFGE 288
Query: 215 LVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAH 274
+ LR L L G L AA + L + L L+ N L L P L+ L+VL++
Sbjct: 289 MAGLRELWLNGTHLRTLPAAAFRNLSGLQTLGLTRNPLLSALPPGMFHGLTELRVLAVHT 348
Query: 275 NQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLA 334
N + AL GL +L +S HN++ L FR LS+L + L HN++ + G A
Sbjct: 349 NALEELPEDALRGLGRLRQVSLRHNRLRALPRTLFRNLSSLVTVQLEHNQLKTLPGDVFA 408
Query: 335 HLSNLTTLDLSHN 347
L LT + L HN
Sbjct: 409 ALPQLTRVLLGHN 421
Score = 201 (75.8 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 80/289 (27%), Positives = 130/289 (44%)
Query: 96 RVSLLDCTLSNVTVLP---GKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPN 152
R LL LS V P K + V + S G + +I++ +GL + L + L
Sbjct: 3 RSVLLSAVLSLVGAQPFPCPKTCKCVVRDAVQCSGGSVAHIAE---LGLPTNLTHILLFR 59
Query: 153 NLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCL 212
V+ + + + + L RL LS + + ++ +F L L L L+ NK+ L + L
Sbjct: 60 MDRGVLQSHSFSGMTV-LQRLMLSDSHISAIDPGTFNDLVKLKTLRLTRNKISHLPRAIL 118
Query: 213 APLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSI 272
+V L L L N L Q L ++ DL L+ N L+ L + L LKVL +
Sbjct: 119 DKMVLLEQLFLDHNALRDLDQNLFQKLLNLRDLCLNQNQLSF-LPANLFSSLGKLKVLDL 177
Query: 273 AHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGAS 332
+ N + + +G L KL L + N++ L+ L L+ L L N + +++ +
Sbjct: 178 SRNNLTHLPQGLLGAQIKLEKLLLYSNRLMSLDSGLLANLGALTELRLERNHLRSIAPGA 237
Query: 333 LAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIY 381
L NL+TL LS N L +L L + L L L +N + PE ++
Sbjct: 238 FDSLGNLSTLTLSGNLLESLPPALFLHVSWLTRLTLFENPLEELPEVLF 286
Score = 188 (71.2 bits), Expect = 7.2e-14, Sum P(2) = 7.2e-14
Identities = 73/256 (28%), Positives = 111/256 (43%)
Query: 137 AFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNF 196
+F G++ LQ L L ++ +S + L L L L+ N++ L + L
Sbjct: 69 SFSGMTV-LQRLMLSDSHISAIDPGTFNDLV-KLKTLRLTRNKISHLPRAILDKMVLLEQ 126
Query: 197 LDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPL 256
L L +N L L Q+ L+ LR L L N+L+ L + LDLS N L L
Sbjct: 127 LFLDHNALRDLDQNLFQKLLNLRDLCLNQNQLSFLPANLFSSLGKLKVLDLSRNNLTH-L 185
Query: 257 GPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLS 316
+ L+ L + N+ S+ G LA L LT L N + + +F +L LS
Sbjct: 186 PQGLLGAQIKLEKLLLYSNRLMSLDSGLLANLGALTELRLERNHLRSIAPGAFDSLGNLS 245
Query: 317 HLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISME 376
L L+ N + ++ A H+S LT L L N L L + L + L+EL L+ +
Sbjct: 246 TLTLSGNLLESLPPALFLHVSWLTRLTLFENPLEELPEVLFGEMAGLRELWLNGTHLRTL 305
Query: 377 PECIY---VGFNTMDL 389
P + G T+ L
Sbjct: 306 PAAAFRNLSGLQTLGL 321
Score = 167 (63.8 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 71/285 (24%), Positives = 114/285 (40%)
Query: 114 FLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRL 173
F + + L L ++ +L + F L L+ L L N L+ +P L L++L
Sbjct: 142 FQKLLNLRDLCLNQNQLSFLPANLFSSLGK-LKVLDLSRNNLTHLPQGLLGAQI-KLEKL 199
Query: 174 DLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVV 233
L N+L L++ L +L L L N L +++ L L L L GN L
Sbjct: 200 LLYSNRLMSLDSGLLANLGALTELRLERNHLRSIAPGAFDSLGNLSTLTLSGNLLESLPP 259
Query: 234 AALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTS 293
A + +T L L N L L ++ L+ L + ++ A L L +
Sbjct: 260 ALFLHVSWLTRLTLFENPLE-ELPEVLFGEMAGLRELWLNGTHLRTLPAAAFRNLSGLQT 318
Query: 294 LSCHHNQI-DVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRAL 352
L N + L F L+ L L + N + + +L L L + L HN LRAL
Sbjct: 319 LGLTRNPLLSALPPGMFHGLTELRVLAVHTNALEELPEDALRGLGRLRQVSLRHNRLRAL 378
Query: 353 TQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELIYSGVW 397
+ L L SL ++L+ N + P ++ + L+ W
Sbjct: 379 PRTLFRNLSSLVTVQLEHNQLKTLPGDVFAALPQLTRVLLGHNPW 423
Score = 71 (30.1 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L+ L+VL++ N + AL GL +L +S HN++ L F N+
Sbjct: 338 LTELRVLAVHTNALEELPEDALRGLGRLRQVSLRHNRLRALPRTLFRNL 386
Score = 63 (27.2 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 13/47 (27%), Positives = 23/47 (48%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFS 690
L L+ +S+ HN+ ++ R L L ++ HNQ+ L F+
Sbjct: 362 LGRLRQVSLRHNRLRALPRTLFRNLSSLVTVQLEHNQLKTLPGDVFA 408
Score = 58 (25.5 bits), Expect = 5.8e-14, Sum P(2) = 5.8e-14
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 679
LSSL + + HNQ ++ A L +LT + HN
Sbjct: 386 LSSLVTVQLEHNQLKTLPGDVFAALPQLTRVLLGHN 421
Score = 54 (24.1 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 644 LSSLKVLSIAHNQF-SSVRRGALAGLDKLTSLSCHHNQIDVL-ED 686
LS L+ L + N S++ G GL +L L+ H N ++ L ED
Sbjct: 313 LSGLQTLGLTRNPLLSALPPGMFHGLTELRVLAVHTNALEELPED 357
>UNIPROTKB|F1S5B4 [details] [associations]
symbol:LGR6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR002131 PRINTS:PR00373
PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 SMART:SM00013 GO:GO:0016500
GeneTree:ENSGT00650000092962 CTD:59352 KO:K08399 OMA:AYGKAPS
EMBL:CU929522 EMBL:FP565468 RefSeq:XP_003130662.2
Ensembl:ENSSSCT00000011954 GeneID:100511400 KEGG:ssc:100511400
Uniprot:F1S5B4
Length = 967
Score = 246 (91.7 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 95/289 (32%), Positives = 134/289 (46%)
Query: 65 ACDLPHTLRCTANKSDLYAISE--SLRGLE--PDERVSL---LDCTLSNVTVL-PGKFLE 116
AC P RC + D + +S S RGL P + L LD +++N+T L PG F
Sbjct: 33 ACPAP--CRC---QEDGFMLSADCSERGLSAVPGDLHPLTAYLDLSMNNLTELQPGLFRH 87
Query: 117 GVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLS 176
L L +S L +I AF GL S L+ L L NN L +P AL L P+L L L
Sbjct: 88 LSFLEELRLSGNHLSHIPGQAFSGLYS-LKILMLQNNQLGGIPAEALWEL-PSLQSLRLD 145
Query: 177 HNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAAL 236
N + + + SF+GL +L L L N L + L+ L L+ + L NR++ A
Sbjct: 146 ANLISLVPDGSFEGLPALRHLWLDDNALTEVPVGALSSLPALQAMTLALNRISHVPDYAF 205
Query: 237 QGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSC 296
Q L S+ L L HN LG + L SL+ L + HN+ A+ L +L L
Sbjct: 206 QNLSSLVVLHL-HNNRIQHLGAHSFEGLHSLETLDLNHNELQEFPV-AIRTLGRLQELGF 263
Query: 297 HHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLS 345
H+N I + + +F L + N I V ++ HL L TL L+
Sbjct: 264 HNNNIQTIPEKAFLGNPLLQTIHFYDNPIQFVGRSAFRHLPRLHTLSLN 312
Score = 243 (90.6 bits), Expect = 2.4e-18, Sum P(2) = 2.4e-18
Identities = 83/230 (36%), Positives = 120/230 (52%)
Query: 155 LSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAP 214
LS VP L PL LD LS N L +L+ F+ LS L L LS N L + +
Sbjct: 56 LSAVPGD-LHPLTAYLD---LSMNNLTELQPGLFRHLSFLEELRLSGNHLSHIPGQAFSG 111
Query: 215 LVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPS-TVPRLSSLKVLSIA 273
L +L++L LQ N+L AL L S+ L L NL++ L P + L +L+ L +
Sbjct: 112 LYSLKILMLQNNQLGGIPAEALWELPSLQSLRLDANLIS--LVPDGSFEGLPALRHLWLD 169
Query: 274 HNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASL 333
N + V GAL+ L L +++ N+I + D++F+ LS+L L L +NRI + S
Sbjct: 170 DNALTEVPVGALSSLPALQAMTLALNRISHVPDYAFQNLSSLVVLHLHNNRIQHLGAHSF 229
Query: 334 AHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVG 383
L +L TLDL+HN L+ + T L LQEL +N+I PE ++G
Sbjct: 230 EGLHSLETLDLNHNELQEFPVAIRT-LGRLQELGFHNNNIQTIPEKAFLG 278
Score = 205 (77.2 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 84/316 (26%), Positives = 136/316 (43%)
Query: 67 DLP--HTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLV 124
+LP +LR AN L S GL + L D L+ V V G L +
Sbjct: 135 ELPSLQSLRLDANLISLVP-DGSFEGLPALRHLWLDDNALTEVPV--GALSSLPALQAMT 191
Query: 125 ISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLE 184
++ + ++ D AF LSS L L L NN + + + L +L+ LDL+HN+L +
Sbjct: 192 LALNRISHVPDYAFQNLSS-LVVLHLHNNRIQHLGAHSFEGLH-SLETLDLNHNELQEFP 249
Query: 185 NTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTD 244
+ + L L L N + T+ + L+ + N + +A + L +
Sbjct: 250 -VAIRTLGRLQELGFHNNNIQTIPEKAFLGNPLLQTIHFYDNPIQFVGRSAFRHLPRLHT 308
Query: 245 LDLSHNLLAGPLGPSTVPRL---SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 301
L L+ G P L +SL++L++ + G L +L L HNQI
Sbjct: 309 LSLN-----GASDIQEFPDLKGTTSLEILTLTRAGLQRLPPGMCQQLPRLQVLELSHNQI 363
Query: 302 DVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLK 361
L S L + L HNRI + + + L++L LDLS N +R++ + L+
Sbjct: 364 QGLP--SLHRCQKLEKIGLQHNRIWEIGADTFSQLTSLQALDLSWNAIRSIHPEAFATLR 421
Query: 362 SLQELRLDDNDISMEP 377
+L +L L N ++M P
Sbjct: 422 ALVKLDLTHNQLTMLP 437
Score = 152 (58.6 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 67/252 (26%), Positives = 107/252 (42%)
Query: 116 EGV-TLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLD 174
EG+ +L L ++ EL+ I LQ LG NN + +P A P L +
Sbjct: 230 EGLHSLETLDLNHNELQEFP--VAIRTLGRLQELGFHNNNIQTIPEKAFLG-NPLLQTIH 286
Query: 175 LSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVA 234
N + + ++F+ L L+ L L+ + D L +L +L L L
Sbjct: 287 FYDNPIQFVGRSAFRHLPRLHTLSLNGASDIQEFPD-LKGTTSLEILTLTRAGLQRLPPG 345
Query: 235 ALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSL 294
Q L + L+LSHN + G PS + R L+ + + HN+ + + L L +L
Sbjct: 346 MCQQLPRLQVLELSHNQIQGL--PS-LHRCQKLEKIGLQHNRIWEIGADTFSQLTSLQAL 402
Query: 295 SCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNF--LRAL 352
N I + +F L L LDL HN++ + LA L L L L N +A
Sbjct: 403 DLSWNAIRSIHPEAFATLRALVKLDLTHNQLTMLP---LAGLGGLVHLKLKGNLGLSQAF 459
Query: 353 TQDLITPLKSLQ 364
++D L++L+
Sbjct: 460 SKDSFPKLRTLE 471
Score = 141 (54.7 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 48/157 (30%), Positives = 80/157 (50%)
Query: 115 LEGVT-LHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRL 173
L+G T L L ++ L+ + G L LQ L L +N + +P+ L+++
Sbjct: 323 LKGTTSLEILTLTRAGLQRLPPGMCQQLPR-LQVLELSHNQIQGLPS---LHRCQKLEKI 378
Query: 174 DLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVV 233
L HN+++++ +F L+SL LDLS+N + ++ + A L L L L N+LT+ +
Sbjct: 379 GLQHNRIWEIGADTFSQLTSLQALDLSWNAIRSIHPEAFATLRALVKLDLTHNQLTMLPL 438
Query: 234 AALQGLRSVTDLDLSHNL-LAGPLGPSTVPRLSSLKV 269
A L GL L L NL L+ + P+L +L+V
Sbjct: 439 AGLGGL---VHLKLKGNLGLSQAFSKDSFPKLRTLEV 472
Score = 115 (45.5 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 47/157 (29%), Positives = 71/157 (45%)
Query: 233 VAALQG-LRSVTD-LDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDK 290
++A+ G L +T LDLS N L L P LS L+ L ++ N S + A +GL
Sbjct: 56 LSAVPGDLHPLTAYLDLSMNNLT-ELQPGLFRHLSFLEELRLSGNHLSHIPGQAFSGLYS 114
Query: 291 LTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLR 350
L L +NQ+ + + L +L L L N I V S L L L L N L
Sbjct: 115 LKILMLQNNQLGGIPAEALWELPSLQSLRLDANLISLVPDGSFEGLPALRHLWLDDNALT 174
Query: 351 ALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTM 387
+ ++ L +LQ + L N IS P+ + +++
Sbjct: 175 EVPVGALSSLPALQAMTLALNRISHVPDYAFQNLSSL 211
Score = 63 (27.2 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL 684
L+SL+ L ++ N S+ A A L L L HNQ+ +L
Sbjct: 396 LTSLQALDLSWNAIRSIHPEAFATLRALVKLDLTHNQLTML 436
Score = 59 (25.8 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
LSSL VL + +N+ + + GL L +L +HN++
Sbjct: 208 LSSLVVLHLHNNRIQHLGAHSFEGLHSLETLDLNHNEL 245
Score = 58 (25.5 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 14/46 (30%), Positives = 23/46 (50%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
L SL+ L + HN+ A+ L +L L H+N I + + +F
Sbjct: 232 LHSLETLDLNHNELQEFPV-AIRTLGRLQELGFHNNNIQTIPEKAF 276
Score = 47 (21.6 bits), Expect = 5.2e-17, Sum P(2) = 5.2e-17
Identities = 9/14 (64%), Positives = 11/14 (78%)
Query: 663 GALAGLDKLTSLSC 676
GA+AG + LT LSC
Sbjct: 602 GAIAGANALTGLSC 615
Score = 47 (21.6 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 9/14 (64%), Positives = 11/14 (78%)
Query: 283 GALAGLDKLTSLSC 296
GA+AG + LT LSC
Sbjct: 602 GAIAGANALTGLSC 615
Score = 46 (21.3 bits), Expect = 6.6e-17, Sum P(2) = 6.6e-17
Identities = 16/60 (26%), Positives = 26/60 (43%)
Query: 625 INRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL 684
+N + + L+ TT SL++L++ + G L +L L HNQI L
Sbjct: 311 LNGASDIQEFPDLKGTT----SLEILTLTRAGLQRLPPGMCQQLPRLQVLELSHNQIQGL 366
Score = 40 (19.1 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGL 668
L +L L + HNQ + + L GL
Sbjct: 420 LRALVKLDLTHNQLTMLPLAGLGGL 444
Score = 38 (18.4 bits), Expect = 4.5e-16, Sum P(2) = 4.5e-16
Identities = 9/46 (19%), Positives = 20/46 (43%)
Query: 647 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L+ + + HN+ + + L L +L N I + +F+ +
Sbjct: 375 LEKIGLQHNRIWEIGADTFSQLTSLQALDLSWNAIRSIHPEAFATL 420
>FB|FBgn0034083 [details] [associations]
symbol:lbk "lambik" species:7227 "Drosophila melanogaster"
[GO:0048477 "oogenesis" evidence=IMP] [GO:0008407 "chaeta
morphogenesis" evidence=IMP] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 EMBL:AE013599 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101816 RefSeq:NP_611091.2
ProteinModelPortal:A1ZAB1 SMR:A1ZAB1 STRING:A1ZAB1 PaxDb:A1ZAB1
EnsemblMetazoa:FBtr0302084 GeneID:36788 KEGG:dme:Dmel_CG8434
UCSC:CG8434-RA CTD:36788 FlyBase:FBgn0034083 eggNOG:NOG329771
InParanoid:A1ZAB1 OMA:LEINWST OrthoDB:EOG4T4B98 GenomeRNAi:36788
NextBio:800384 Bgee:A1ZAB1 Uniprot:A1ZAB1
Length = 1252
Score = 262 (97.3 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 94/304 (30%), Positives = 149/304 (49%)
Query: 71 TLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGEL 130
TL NK + + E +R L +VSL L V+P KF+ L LV+++ +
Sbjct: 295 TLHLANNKLNDTTVLE-IRNLLNLTKVSLKRNLLE---VIP-KFIGLSGLKHLVLANNHI 349
Query: 131 KNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKG 190
+IS + L L+ L L N L + ++ P + NL L LS N++ + SF
Sbjct: 350 TSISSESLAALPL-LRTLDLSRNKLHTIELNSF-PKSNNLVHLILSFNEITNVNEHSFAT 407
Query: 191 LSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHN 250
L++L L+LS N+L TL L L+ L L N+L ++ + +GL S+ +L L N
Sbjct: 408 LNNLTDLELSNNRLSTLPIRVFKNLNQLKKLALNFNQLEINW-STFRGLESMKNLQLKSN 466
Query: 251 LLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFR 310
+ L + ++ + +A NQ SS+ R L L KL L+ N I +E ++
Sbjct: 467 KIRA-LQDGVFYVMHKIETIDLAMNQISSLSRQGLFNLTKLRHLNLSFNAISRIEVDTWE 525
Query: 311 ALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDD 370
+L LDL++N I L L L TL+L+HN L+ L ++ +K+L+EL L
Sbjct: 526 FTQSLEVLDLSNNAINEFKPQHLDCLHRLKTLNLAHNRLQYLQENTFDCVKNLEELNLRR 585
Query: 371 NDIS 374
N +S
Sbjct: 586 NRLS 589
Score = 234 (87.4 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 82/296 (27%), Positives = 146/296 (49%)
Query: 85 SESLRGLEPDERVSLLDCTLSNV-TVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSS 143
SESL L P R LD + + + T+ F + L L++S E+ N+++ +F L++
Sbjct: 354 SESLAAL-PLLRT--LDLSRNKLHTIELNSFPKSNNLVHLILSFNEITNVNEHSFATLNN 410
Query: 144 PLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNK 203
L L L NN LS +P L L +L L+ NQL ++ ++F+GL S+ L L NK
Sbjct: 411 -LTDLELSNNRLSTLPIRVFKNLN-QLKKLALNFNQL-EINWSTFRGLESMKNLQLKSNK 467
Query: 204 LMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPR 263
+ L + + + L N+++ L L + L+LS N ++ + T
Sbjct: 468 IRALQDGVFYVMHKIETIDLAMNQISSLSRQGLFNLTKLRHLNLSFNAISR-IEVDTWEF 526
Query: 264 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 323
SL+VL +++N + + L L +L +L+ HN++ L++++F + L L+L N
Sbjct: 527 TQSLEVLDLSNNAINEFKPQHLDCLHRLKTLNLAHNRLQYLQENTFDCVKNLEELNLRRN 586
Query: 324 RIVAV-----SGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 374
R+ + + A L L LDL N L+ ++ ++ L +L+ L L N ++
Sbjct: 587 RLSWIIEDQSAAAPFKGLRKLRRLDLHGNNLKQISTKAMSGLNNLEILNLGSNALA 642
Score = 204 (76.9 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 82/310 (26%), Positives = 140/310 (45%)
Query: 63 LCACDLPHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVT-VLPGKFLEGVTLH 121
L A L TL + NK L+ I L + L + + +T V F L
Sbjct: 357 LAALPLLRTLDLSRNK--LHTIE--LNSFPKSNNLVHLILSFNEITNVNEHSFATLNNLT 412
Query: 122 GLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLY 181
L +S+ L + F L+ L+ L L N L + S L ++ L L N++
Sbjct: 413 DLELSNNRLSTLPIRVFKNLNQ-LKKLALNFNQLEI-NWSTFRGLE-SMKNLQLKSNKIR 469
Query: 182 KLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRS 241
L++ F + + +DL+ N++ +LS+ L L LR L L N ++ V + +S
Sbjct: 470 ALQDGVFYVMHKIETIDLAMNQISSLSRQGLFNLTKLRHLNLSFNAISRIEVDTWEFTQS 529
Query: 242 VTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 301
+ LDLS+N + P + L LK L++AHN+ ++ + L L+ N++
Sbjct: 530 LEVLDLSNNAI-NEFKPQHLDCLHRLKTLNLAHNRLQYLQENTFDCVKNLEELNLRRNRL 588
Query: 302 D-VLEDHS----FRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDL 356
++ED S F+ L L LDL N + +S +++ L+NL L+L N L ++ +
Sbjct: 589 SWIIEDQSAAAPFKGLRKLRRLDLHGNNLKQISTKAMSGLNNLEILNLGSNALASIQVNA 648
Query: 357 ITPLKSLQEL 366
+ L +L
Sbjct: 649 FEHMLRLNKL 658
Score = 190 (71.9 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 53/158 (33%), Positives = 86/158 (54%)
Query: 218 LRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQF 277
++ L L N+L + V ++ L ++T + L NLL + P + LS LK L +A+N
Sbjct: 293 VQTLHLANNKLNDTTVLEIRNLLNLTKVSLKRNLLE--VIPKFIG-LSGLKHLVLANNHI 349
Query: 278 SSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLS 337
+S+ +LA L L +L N++ +E +SF + L HL L+ N I V+ S A L+
Sbjct: 350 TSISSESLAALPLLRTLDLSRNKLHTIELNSFPKSNNLVHLILSFNEITNVNEHSFATLN 409
Query: 338 NLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISM 375
NLT L+LS+N L L + L L++L L+ N + +
Sbjct: 410 NLTDLELSNNRLSTLPIRVFKNLNQLKKLALNFNQLEI 447
Score = 187 (70.9 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 83/337 (24%), Positives = 152/337 (45%)
Query: 61 NDLCACDLPHTLRCT--ANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGV 118
ND ++ + L T + K +L + GL + + L + +++T + + L +
Sbjct: 304 NDTTVLEIRNLLNLTKVSLKRNLLEVIPKFIGLSGLKHLVLAN---NHITSISSESLAAL 360
Query: 119 TL-HGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSH 177
L L +S +L I +F S+ L L L N ++ V + A L NL L+LS+
Sbjct: 361 PLLRTLDLSRNKLHTIELNSF-PKSNNLVHLILSFNEITNVNEHSFATLN-NLTDLELSN 418
Query: 178 NQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQ 237
N+L L FK L+ L L L++N+L ++ L +++ L+L+ N++
Sbjct: 419 NRLSTLPIRVFKNLNQLKKLALNFNQL-EINWSTFRGLESMKNLQLKSNKIRALQDGVFY 477
Query: 238 GLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCH 297
+ + +DL+ N ++ L + L+ L+ L+++ N S + L L
Sbjct: 478 VMHKIETIDLAMNQISS-LSRQGLFNLTKLRHLNLSFNAISRIEVDTWEFTQSLEVLDLS 536
Query: 298 HNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQD-- 355
+N I+ + L L L+LAHNR+ + + + NL L+L N L + +D
Sbjct: 537 NNAINEFKPQHLDCLHRLKTLNLAHNRLQYLQENTFDCVKNLEELNLRRNRLSWIIEDQS 596
Query: 356 LITPLKSLQELR-LD--DNDISMEPECIYVGFNTMDL 389
P K L++LR LD N++ G N +++
Sbjct: 597 AAAPFKGLRKLRRLDLHGNNLKQISTKAMSGLNNLEI 633
Score = 153 (58.9 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 54/152 (35%), Positives = 77/152 (50%)
Query: 261 VPRLSS-LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 319
VP L S ++ L +A+N+ + + L LT +S N ++V+ F LS L HL
Sbjct: 286 VPVLPSYVQTLHLANNKLNDTTVLEIRNLLNLTKVSLKRNLLEVIP--KFIGLSGLKHLV 343
Query: 320 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPEC 379
LA+N I ++S SLA L L TLDLS N L + + +L L L N+I+ E
Sbjct: 344 LANNHITSISSESLAALPLLRTLDLSRNKLHTIELNSFPKSNNLVHLILSFNEITNVNEH 403
Query: 380 IYVGFNTM-DLELIYSGVWRHSTLLIPVMLSL 410
+ N + DLEL + R STL I V +L
Sbjct: 404 SFATLNNLTDLELSNN---RLSTLPIRVFKNL 432
Score = 65 (27.9 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 14/47 (29%), Positives = 29/47 (61%)
Query: 646 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
SL+VL +++N + + L L +L +L+ HN++ L++++F V
Sbjct: 529 SLEVLDLSNNAINEFKPQHLDCLHRLKTLNLAHNRLQYLQENTFDCV 575
Score = 60 (26.2 bits), Expect = 5.8e-12, Sum P(2) = 5.8e-12
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 643 LLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLE 685
++ ++ + +A NQ SS+ R L L KL L+ N I +E
Sbjct: 478 VMHKIETIDLAMNQISSLSRQGLFNLTKLRHLNLSFNAISRIE 520
Score = 59 (25.8 bits), Expect = 7.4e-12, Sum P(2) = 7.4e-12
Identities = 13/46 (28%), Positives = 24/46 (52%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID-VLEDHS 688
L LK L++AHN+ ++ + L L+ N++ ++ED S
Sbjct: 551 LHRLKTLNLAHNRLQYLQENTFDCVKNLEELNLRRNRLSWIIEDQS 596
Score = 55 (24.4 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 14/46 (30%), Positives = 23/46 (50%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
L+ LK L++ NQ + GL+ + +L N+I L+D F
Sbjct: 432 LNQLKKLALNFNQLE-INWSTFRGLESMKNLQLKSNKIRALQDGVF 476
Score = 49 (22.3 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 11/50 (22%), Positives = 26/50 (52%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNVI 693
L L+ L + N + A++GL+ L L+ N + ++ ++F +++
Sbjct: 604 LRKLRRLDLHGNNLKQISTKAMSGLNNLEILNLGSNALASIQVNAFEHML 653
Score = 49 (22.3 bits), Expect = 8.0e-11, Sum P(2) = 8.0e-11
Identities = 12/49 (24%), Positives = 23/49 (46%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L S+K L + N+ +++ G + K+ ++ NQI L N+
Sbjct: 455 LESMKNLQLKSNKIRALQDGVFYVMHKIETIDLAMNQISSLSRQGLFNL 503
Score = 46 (21.3 bits), Expect = 2.4e-18, Sum P(2) = 2.4e-18
Identities = 19/71 (26%), Positives = 33/71 (46%)
Query: 628 NNSDSRYVKLQATTI-LLSSLKVLSIAHNQFSSV--RRGALA---GLDKLTSLSCHHNQI 681
N + +R LQ T + +L+ L++ N+ S + + A A GL KL L H N +
Sbjct: 558 NLAHNRLQYLQENTFDCVKNLEELNLRRNRLSWIIEDQSAAAPFKGLRKLRRLDLHGNNL 617
Query: 682 DVLEDHSFSNV 692
+ + S +
Sbjct: 618 KQISTKAMSGL 628
>MGI|MGI:3609246 [details] [associations]
symbol:Lingo3 "leucine rich repeat and Ig domain containing
3" species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:3609246 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 eggNOG:NOG278536 GeneTree:ENSGT00690000101682
HOGENOM:HOG000246971 HSSP:Q05793 HOVERGEN:HBG057546 CTD:645191
OMA:EIDNWPL OrthoDB:EOG4THVSV EMBL:AC166937 EMBL:BC072620
IPI:IPI00131641 RefSeq:NP_001013780.2 UniGene:Mm.40213
ProteinModelPortal:Q6GQU6 SMR:Q6GQU6 PhosphoSite:Q6GQU6
PRIDE:Q6GQU6 Ensembl:ENSMUST00000053986 GeneID:237403
KEGG:mmu:237403 UCSC:uc007gey.2 InParanoid:Q6GQU6 NextBio:383344
Bgee:Q6GQU6 Genevestigator:Q6GQU6 Uniprot:Q6GQU6
Length = 589
Score = 255 (94.8 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 99/328 (30%), Positives = 149/328 (45%)
Query: 64 CACDLP-HTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVL-PGKFLEGVTLH 121
C C T+ C + L AI E G+ + R +L+ + + + L PG TL
Sbjct: 28 CECSASTRTVACGRRR--LTAIPE---GIPAETR--MLELSRNRIRCLNPGDLASLPTLE 80
Query: 122 GLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLY 181
L ++ + ++ GAF L L+ L L N L ++P L +L LDLS N+L
Sbjct: 81 ELDLNHNVIAHVEPGAFANLPR-LRVLRLRGNQLKLIPPGVFTHL-DSLTLLDLSENKLV 138
Query: 182 KLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRS 241
L + SF+ L SL L++ N L+ +S+ A L+ L L L+ LT +L LR
Sbjct: 139 ILLDFSFQDLRSLQRLEVGDNDLVFISRRAFAGLLGLAELTLERCNLTSLSPESLGHLRG 198
Query: 242 VTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAH-NQFSSVRRGALAGLDKLTSLSCHHNQ 300
+ L L H +A L +L L L I + V G+L GL+ LTSLS H
Sbjct: 199 LGALRLRHLAIAA-LEDQNFQKLPGLSHLEIDNWPLLEEVAPGSLRGLN-LTSLSITHTN 256
Query: 301 IDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPL 360
I + + R + L+ L+L+HN I V S L L L L+ L + L
Sbjct: 257 ITAVPAAALRQQAHLTCLNLSHNPISMVPRGSFRDLVRLRELHLAGALLAVIEPQAFVGL 316
Query: 361 KSLQELRLDDNDISMEPECIYVGFNTMD 388
+ ++ L L DN +S E + NT++
Sbjct: 317 RQIRLLNLSDNLLSTLEENTFHSVNTLE 344
Score = 235 (87.8 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 86/301 (28%), Positives = 135/301 (44%)
Query: 88 LRGLEPDERVSL-----LDCTLSNVT-VLPGKFLEGVTLHGLVISSGELKNISDGAFIGL 141
+R L P + SL LD + + V PG F L L + +LK I G F L
Sbjct: 65 IRCLNPGDLASLPTLEELDLNHNVIAHVEPGAFANLPRLRVLRLRGNQLKLIPPGVFTHL 124
Query: 142 SSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSY 201
S L L L N L ++ + L +L RL++ N L + +F GL L L L
Sbjct: 125 DS-LTLLDLSENKLVILLDFSFQDLR-SLQRLEVGDNDLVFISRRAFAGLLGLAELTLER 182
Query: 202 NKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTV 261
L +LS + L L L LRL+ + Q L ++ L++ + L + P ++
Sbjct: 183 CNLTSLSPESLGHLRGLGALRLRHLAIAALEDQNFQKLPGLSHLEIDNWPLLEEVAPGSL 242
Query: 262 PRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 321
L+ L LSI H ++V AL LT L+ HN I ++ SFR L L L LA
Sbjct: 243 RGLN-LTSLSITHTNITAVPAAALRQQAHLTCLNLSHNPISMVPRGSFRDLVRLRELHLA 301
Query: 322 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIY 381
+ + + L + L+LS N L L ++ + +L+ LR+D N ++ + ++
Sbjct: 302 GALLAVIEPQAFVGLRQIRLLNLSDNLLSTLEENTFHSVNTLETLRVDGNPLACDCRLLW 361
Query: 382 V 382
+
Sbjct: 362 I 362
Score = 217 (81.4 bits), Expect = 9.5e-15, Sum P(2) = 9.5e-15
Identities = 93/304 (30%), Positives = 142/304 (46%)
Query: 101 DCTLSNVTVLPGK-----FLEGVTLHG--LVISSGELKNISDGAFIGLSSPLQALGLPNN 153
+C+ S TV G+ EG+ L +S ++ ++ G L + L+ L L +N
Sbjct: 29 ECSASTRTVACGRRRLTAIPEGIPAETRMLELSRNRIRCLNPGDLASLPT-LEELDLNHN 87
Query: 154 LLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLA 213
+++ V A A L P L L L NQL + F L SL LDLS NKL+ L
Sbjct: 88 VIAHVEPGAFANL-PRLRVLRLRGNQLKLIPPGVFTHLDSLTLLDLSENKLVILLDFSFQ 146
Query: 214 PLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSH-NLLAGPLGPSTVPRLSSLKVLSI 272
L +L+ L + N L A GL + +L L NL + L P ++ L L L +
Sbjct: 147 DLRSLQRLEVGDNDLVFISRRAFAGLLGLAELTLERCNLTS--LSPESLGHLRGLGALRL 204
Query: 273 AHNQFSSVRRGALAGLDKLTSLSCHHNQID---VLED---HSFRALSTLSHLDLAHNRIV 326
H +++ KL LS H +ID +LE+ S R L+ L+ L + H I
Sbjct: 205 RHLAIAALED---QNFQKLPGLS--HLEIDNWPLLEEVAPGSLRGLN-LTSLSITHTNIT 258
Query: 327 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISM-EPECIYVGFN 385
AV A+L ++LT L+LSHN + + + L L+EL L +++ EP+ +VG
Sbjct: 259 AVPAAALRQQAHLTCLNLSHNPISMVPRGSFRDLVRLRELHLAGALLAVIEPQA-FVGLR 317
Query: 386 TMDL 389
+ L
Sbjct: 318 QIRL 321
Score = 49 (22.3 bits), Expect = 9.5e-15, Sum P(2) = 9.5e-15
Identities = 13/49 (26%), Positives = 25/49 (51%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L+ L +A + + A GL ++ L+ N + LE+++F +V
Sbjct: 292 LVRLRELHLAGALLAVIEPQAFVGLRQIRLLNLSDNLLSTLEENTFHSV 340
>UNIPROTKB|O75094 [details] [associations]
symbol:SLIT3 "Slit homolog 3 protein" species:9606 "Homo
sapiens" [GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0010629 "negative regulation of gene expression" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=NAS] [GO:0005739
"mitochondrion" evidence=NAS] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IDA] [GO:0050919 "negative chemotaxis"
evidence=IDA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEP] [GO:0032870 "cellular response to hormone
stimulus" evidence=IEP] [GO:0051414 "response to cortisol stimulus"
evidence=IEP] [GO:0048495 "Roundabout binding" evidence=IPI]
[GO:0021834 "chemorepulsion involved in embryonic olfactory bulb
interneuron precursor migration" evidence=IDA] [GO:0007411 "axon
guidance" evidence=IDA;TAS] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IMP] [GO:0030308
"negative regulation of cell growth" evidence=IMP] [GO:0035385
"Roundabout signaling pathway" evidence=IMP] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005739
Reactome:REACT_111045 GO:GO:0008285 GO:GO:0005615 GO:GO:0007420
GO:GO:0030308 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
Pfam:PF01463 GO:GO:0051414 GO:GO:0050919 GO:GO:0035385
GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T EMBL:AB017169 EMBL:AB011538 EMBL:AY358884
EMBL:AC008409 EMBL:AC008479 EMBL:AC011365 EMBL:AC011389
EMBL:AC027311 EMBL:AC094081 EMBL:AC112165 EMBL:BC146759
EMBL:AL122074 EMBL:AF075240 IPI:IPI00409709 IPI:IPI00409710
IPI:IPI00983148 PIR:T34555 RefSeq:NP_003053.1 UniGene:Hs.604116
ProteinModelPortal:O75094 SMR:O75094 IntAct:O75094
MINT:MINT-2797284 STRING:O75094 PhosphoSite:O75094 PaxDb:O75094
PRIDE:O75094 Ensembl:ENST00000404867 Ensembl:ENST00000519560
GeneID:6586 KEGG:hsa:6586 UCSC:uc003mab.3 CTD:6586
GeneCards:GC05M168021 H-InvDB:HIX0005394 HGNC:HGNC:11087
HPA:HPA051630 MIM:603745 neXtProt:NX_O75094 PharmGKB:PA35940
InParanoid:O75094 KO:K06850 PhylomeDB:O75094 ChiTaRS:SLIT3
GenomeRNAi:6586 NextBio:25629 Bgee:O75094 CleanEx:HS_SLIT3
Genevestigator:O75094 GermOnline:ENSG00000184347 Uniprot:O75094
Length = 1523
Score = 173 (66.0 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 52/156 (33%), Positives = 79/156 (50%)
Query: 197 LDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHN---LLA 253
LDL N + +++ A L LRVL L+ N+++V A Q L+ + L L+ N +L
Sbjct: 66 LDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLP 125
Query: 254 GPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALS 313
L ST P+L+ L ++ NQ + R A G+ + +L +N I +ED +FRAL
Sbjct: 126 ELLFQST-PKLTRL---DLSENQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRALR 181
Query: 314 TLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFL 349
L L L +N I + S H+ + TL L N L
Sbjct: 182 DLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHL 217
Score = 168 (64.2 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 84/311 (27%), Positives = 131/311 (42%)
Query: 84 ISESLRGLEPDERVSL--LDCTLSNVTVLP-GKFLEGVTLHGLVISSGELKNISDGAFIG 140
I+E ++GL D VSL L + + L F + L+ L + +L+ IS G F
Sbjct: 367 ITEIVKGLF-DGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAP 425
Query: 141 LSSPLQALGLPNN-LLSVVPTSALAP-LAPN-LDRLDLSHNQLYKLENTSFKGLSSLNF- 196
L S +Q L L N + LA L N ++ + +L N + S F
Sbjct: 426 LQS-IQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFR 484
Query: 197 LDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVS---VVAALQGLRS-VTDLDLSHNLL 252
S + S +C LV R +G + S +V L VTDL L+ N +
Sbjct: 485 CSGSEDYRSRFSSECFMDLVCPEKCRCEGTIVDCSNQKLVRIPSHLPEYVTDLRLNDNEV 544
Query: 253 AGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRAL 312
+ +L +L+ +++++N+ VR GA G + L NQ++ + FR L
Sbjct: 545 SVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRVFRGL 604
Query: 313 STLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDND 372
S L L L N I VS + A LS++ L L N + +T T L SL + L N
Sbjct: 605 SGLKTLMLRSNLIGCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNP 664
Query: 373 ISMEPECIYVG 383
+ ++G
Sbjct: 665 FNCNCHLAWLG 675
Score = 161 (61.7 bits), Expect = 6.9e-10, Sum P(2) = 6.9e-10
Identities = 49/170 (28%), Positives = 76/170 (44%)
Query: 169 NLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRL 228
N +RLDL N + ++ F GL +L L L N++ + + L L LRL N+L
Sbjct: 62 NAERLDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKL 121
Query: 229 TVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGL 288
V Q +T LDLS N + G + ++ +K L + +N S + GA L
Sbjct: 122 QVLPELLFQSTPKLTRLDLSENQIQG-IPRKAFRGITDVKNLQLDNNHISCIEDGAFRAL 180
Query: 289 DKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSN 338
L L+ ++N I + SF + + L L N + LA LS+
Sbjct: 181 RDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYC--DCHLAWLSD 228
Score = 154 (59.3 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 43/155 (27%), Positives = 77/155 (49%)
Query: 234 AALQGL-RSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLT 292
A +G+ R+ LDL N + + L +L+VL + NQ S + RGA L +L
Sbjct: 54 AVPRGIPRNAERLDLDRNNITR-ITKMDFAGLKNLRVLHLEDNQVSVIERGAFQDLKQLE 112
Query: 293 SLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRAL 352
L + N++ VL + F++ L+ LDL+ N+I + + ++++ L L +N + +
Sbjct: 113 RLRLNKNKLQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCI 172
Query: 353 TQDLITPLKSLQELRLDDNDISMEPECIYVGFNTM 387
L+ L+ L L++N+IS + FN M
Sbjct: 173 EDGAFRALRDLEILTLNNNNIS---RILVTSFNHM 204
Score = 151 (58.2 bits), Expect = 1.4e-18, Sum P(3) = 1.4e-18
Identities = 53/191 (27%), Positives = 82/191 (42%)
Query: 65 ACDLPHTLRCTANKSDLYAISESL--RGLEPDERVSLLDCTLSNVTVLPGKFLEGV-TLH 121
AC P C+A D + + RG+ P LD +N+T + G+ L
Sbjct: 33 AC--PTKCTCSAASVDCHGLGLRAVPRGI-P-RNAERLDLDRNNITRITKMDFAGLKNLR 88
Query: 122 GLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLY 181
L + ++ I GAF L L+ L L N L V+P L P L RLDLS NQ+
Sbjct: 89 VLHLEDNQVSVIERGAFQDLKQ-LERLRLNKNKLQVLP-ELLFQSTPKLTRLDLSENQIQ 146
Query: 182 KLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRS 241
+ +F+G++ + L L N + + L L +L L N ++ +V + +
Sbjct: 147 GIPRKAFRGITDVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMPK 206
Query: 242 VTDLDLSHNLL 252
+ L L N L
Sbjct: 207 IRTLRLHSNHL 217
Score = 150 (57.9 bits), Expect = 7.3e-07, Sum P(2) = 7.3e-07
Identities = 77/281 (27%), Positives = 130/281 (46%)
Query: 109 VLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAP 168
V G F ++ L+++ +L+ + F GLS L+ L L +NL+ V A L+
Sbjct: 572 VREGAFDGAASVQELMLTGNQLETVHGRVFRGLSG-LKTLMLRSNLIGCVSNDTFAGLS- 629
Query: 169 NLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDC-LAPLVT-LRVLRL-QG 225
++ L L N++ + +F L SL+ ++L N + +C LA L LR R+ G
Sbjct: 630 SVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPF---NCNCHLAWLGKWLRKRRIVSG 686
Query: 226 N-RLTVSVVAALQGLRSVTDLDLS---HNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVR 281
N R ++ V D + + + L P + + ++ + N+
Sbjct: 687 NPRCQKPFFLKEIPIQDVAIQDFTCDGNEESSCQLSPRCPEQCTCMETVVRCSNKGL--- 743
Query: 282 RGALAGLDK-LTSLSCHHNQIDVLEDHSFRALSTLSHL---DLAHNRIVAVSGASLAHLS 337
R G+ K +T L N + + R LS L HL DL++N I ++ + +++S
Sbjct: 744 RALPRGMPKDVTELYLEGNHLTAVP----RELSALRHLTLIDLSNNSISMLTNYTFSNMS 799
Query: 338 NLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPE 378
+L+TL LS+N LR + L+SL+ L L NDIS PE
Sbjct: 800 HLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPE 840
Score = 146 (56.5 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 81/314 (25%), Positives = 137/314 (43%)
Query: 89 RGLEPD-ERVSLLDCTLSNVTVLPGKFLEGVT-LHGLVISSGELKNISDGAFIGLSSPLQ 146
RG D +++ L + + VLP + L L +S +++ I AF G++ ++
Sbjct: 102 RGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGITD-VK 160
Query: 147 ALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMT 206
L L NN +S + A L +L+ L L++N + ++ TSF + + L L N L
Sbjct: 161 NLQLDNNHISCIEDGAFRALR-DLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYC 219
Query: 207 LSQDC-LAPLVT-LRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLG--PS-TV 261
DC LA L LR R G L+G +V D+ + P PS
Sbjct: 220 ---DCHLAWLSDWLRQRRTVGQFTLCMAPVHLRGF-NVADVQKKEYVCPAPHSEPPSCNA 275
Query: 262 PRLSSLKVLSIAHNQFSSVRRGAL---AGLDK-LTSLSCHHNQIDVLEDHSFRALSTLSH 317
+S + ++N +G + A L + + + N I + +F L
Sbjct: 276 NSISCPSPCTCSNNIVDCRGKGLMEIPANLPEGIVEIRLEQNSIKAIPAGAFTQYKKLKR 335
Query: 318 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEP 377
+D++ N+I ++ + L +LT+L L N + + + L L SLQ L L+ N I+
Sbjct: 336 IDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIVKGLFDGLVSLQLLLLNANKIN--- 392
Query: 378 ECIYVGFNTM-DLE 390
C+ V NT DL+
Sbjct: 393 -CLRV--NTFQDLQ 403
Score = 142 (55.0 bits), Expect = 1.4e-18, Sum P(3) = 1.4e-18
Identities = 43/131 (32%), Positives = 64/131 (48%)
Query: 242 VTDLDLSHNLL-AGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQ 300
+ ++ L N + A P G T + LK + I+ NQ S + A GL LTSL + N+
Sbjct: 309 IVEIRLEQNSIKAIPAGAFT--QYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNK 366
Query: 301 IDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPL 360
I + F L +L L L N+I + + L NL L L N L+ +++ L PL
Sbjct: 367 ITEIVKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPL 426
Query: 361 KSLQELRLDDN 371
+S+Q L L N
Sbjct: 427 QSIQTLHLAQN 437
Score = 133 (51.9 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 38/128 (29%), Positives = 61/128 (47%)
Query: 150 LPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQ 209
L N + +P A L R+D+S NQ+ + +F+GL SL L L NK+ + +
Sbjct: 314 LEQNSIKAIPAGAFTQYK-KLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIVK 372
Query: 210 DCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKV 269
LV+L++L L N++ V Q L+++ L L N L + L S++
Sbjct: 373 GLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQ-TISKGLFAPLQSIQT 431
Query: 270 LSIAHNQF 277
L +A N F
Sbjct: 432 LHLAQNPF 439
Score = 128 (50.1 bits), Expect = 0.00036, P = 0.00036
Identities = 39/113 (34%), Positives = 58/113 (51%)
Query: 140 GLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDL 199
G+ + L L N L+ VP L+ L +L +DLS+N + L N +F +S L+ L L
Sbjct: 749 GMPKDVTELYLEGNHLTAVPRE-LSALR-HLTLIDLSNNSISMLTNYTFSNMSHLSTLIL 806
Query: 200 SYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLL 252
SYN+L + L +LRVL L GN ++ + L S++ L L N L
Sbjct: 807 SYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPL 859
Score = 119 (46.9 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 67/299 (22%), Positives = 121/299 (40%)
Query: 105 SNVTVLP-GKFLEGVTLHGLVISSGELKNISDGAFIGLSSP-LQALGLPNNLLSVVPTSA 162
+ V+V+ G F + L L ++ +L+ + + F S+P L L L N + +P A
Sbjct: 95 NQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLF--QSTPKLTRLDLSENQIQGIPRKA 152
Query: 163 LAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLR 222
+ ++ L L +N + +E+ +F+ L L L L+ N + + + +R LR
Sbjct: 153 FRGIT-DVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMPKIRTLR 211
Query: 223 LQGNRLTVSV-VAALQG-LRSVTDLDLSHNLLAGPL---GPSTVPRLSSLKVLSIAHNQF 277
L N L +A L LR + L P+ G + V H++
Sbjct: 212 LHSNHLYCDCHLAWLSDWLRQRRTVG-QFTLCMAPVHLRGFNVADVQKKEYVCPAPHSEP 270
Query: 278 SSVRRGALAGLDKLTSLSCHHNQIDV----LEDHSFRALSTLSHLDLAHNRIVAVSGASL 333
S +++ T C +N +D L + + + L N I A+ +
Sbjct: 271 PSCNANSISCPSPCT---CSNNIVDCRGKGLMEIPANLPEGIVEIRLEQNSIKAIPAGAF 327
Query: 334 AHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELI 392
L +D+S N + + D LKSL L L N I+ + ++ G ++ L L+
Sbjct: 328 TQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIVKGLFDGLVSLQLLLL 386
Score = 101 (40.6 bits), Expect = 8.2e-12, Sum P(2) = 8.2e-12
Identities = 32/116 (27%), Positives = 57/116 (49%)
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 317
P +P+ + L + N ++V R L+ L LT + +N I +L +++F +S LS
Sbjct: 747 PRGMPK--DVTELYLEGNHLTAVPR-ELSALRHLTLIDLSNNSISMLTNYTFSNMSHLST 803
Query: 318 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 373
L L++NR+ + + L +L L L N + ++ + L SL L L N +
Sbjct: 804 LILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPL 859
Score = 93 (37.8 bits), Expect = 1.4e-13, Sum P(3) = 1.4e-13
Identities = 29/116 (25%), Positives = 51/116 (43%)
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 317
P+ +P + + + N ++ GA KL + NQI + +F+ L +L+
Sbjct: 302 PANLPE--GIVEIRLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTS 359
Query: 318 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 373
L L N+I + L +L L L+ N + L + L++L L L DN +
Sbjct: 360 LVLYGNKITEIVKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKL 415
Score = 83 (34.3 bits), Expect = 2.4e-11, Sum P(3) = 2.4e-11
Identities = 30/127 (23%), Positives = 59/127 (46%)
Query: 291 LTSLSCHHNQIDVLEDHS-FRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFL 349
+T L + N++ VLE F+ L L ++L++N+I V + +++ L L+ N L
Sbjct: 534 VTDLRLNDNEVSVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQL 593
Query: 350 RALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELIYSGVWRHSTLLIPVMLS 409
+ + L L+ L L N I + G +++ L +Y R +T+ +
Sbjct: 594 ETVHGRVFRGLSGLKTLMLRSNLIGCVSNDTFAGLSSVRLLSLYDN--RITTITPGAFTT 651
Query: 410 LCTRSSV 416
L + S++
Sbjct: 652 LVSLSTI 658
Score = 72 (30.4 bits), Expect = 1.4e-18, Sum P(3) = 1.4e-18
Identities = 18/67 (26%), Positives = 34/67 (50%)
Query: 630 SDSRYVKLQATTIL--LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDH 687
+D+ L+AT I L +L+ +++++N+ VR GA G + L NQ++ +
Sbjct: 540 NDNEVSVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGR 599
Query: 688 SFSNVIG 694
F + G
Sbjct: 600 VFRGLSG 606
Score = 66 (28.3 bits), Expect = 5.1e-09, Sum P(3) = 5.1e-09
Identities = 21/73 (28%), Positives = 35/73 (47%)
Query: 315 LSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 374
++ L L N + AV L+ L +LT +DLS+N + LT + + L L L N +
Sbjct: 754 VTELYLEGNHLTAVP-RELSALRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNRLR 812
Query: 375 MEPECIYVGFNTM 387
P + G ++
Sbjct: 813 CIPVHAFNGLRSL 825
Score = 65 (27.9 bits), Expect = 7.3e-18, Sum P(3) = 7.3e-18
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNVI 693
LS LK L + N V AGL + LS + N+I + +F+ ++
Sbjct: 604 LSGLKTLMLRSNLIGCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLV 653
Score = 65 (27.9 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 647 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNVI 693
LK + I+ NQ S + A GL LTSL + N+I + F ++
Sbjct: 333 LKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIVKGLFDGLV 379
Score = 60 (26.2 bits), Expect = 2.4e-17, Sum P(3) = 2.4e-17
Identities = 18/65 (27%), Positives = 31/65 (47%)
Query: 628 NNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDH 687
NNS S + +S L L +++N+ + A GL L L+ H N I + +
Sbjct: 784 NNSISMLTNYTFSN--MSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEG 841
Query: 688 SFSNV 692
SF+++
Sbjct: 842 SFNDL 846
Score = 55 (24.4 bits), Expect = 7.8e-17, Sum P(3) = 7.8e-17
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 650 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L + N ++V R L+ L LT + +N I +L +++FSN+
Sbjct: 757 LYLEGNHLTAVPR-ELSALRHLTLIDLSNNSISMLTNYTFSNM 798
Score = 54 (24.1 bits), Expect = 9.8e-17, Sum P(3) = 9.8e-17
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
L SL+VL++ N SSV G+ L L+ L+ N +
Sbjct: 822 LRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPL 859
Score = 52 (23.4 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L SL L + N+ + + +G GL L L + N+I+ L ++F ++
Sbjct: 354 LKSLTSLVLYGNKITEIVKGLFDGLVSLQLLLLNANKINCLRVNTFQDL 402
Score = 51 (23.0 bits), Expect = 2.0e-16, Sum P(3) = 2.0e-16
Identities = 11/36 (30%), Positives = 23/36 (63%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 679
LSS+++LS+ N+ +++ GA L L++++ N
Sbjct: 628 LSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSN 663
Score = 50 (22.7 bits), Expect = 2.5e-16, Sum P(3) = 2.5e-16
Identities = 16/68 (23%), Positives = 32/68 (47%)
Query: 625 INRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL 684
IN +N+ + V+ + +S++ L + NQ +V GL L +L N I +
Sbjct: 562 INLSNNKIKEVR-EGAFDGAASVQELMLTGNQLETVHGRVFRGLSGLKTLMLRSNLIGCV 620
Query: 685 EDHSFSNV 692
+ +F+ +
Sbjct: 621 SNDTFAGL 628
Score = 49 (22.3 bits), Expect = 3.2e-16, Sum P(3) = 3.2e-16
Identities = 9/49 (18%), Positives = 26/49 (53%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L ++ +++N S + + + L++L +N++ + H+F+ +
Sbjct: 774 LRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNRLRCIPVHAFNGL 822
Score = 40 (19.1 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 10/38 (26%), Positives = 16/38 (42%)
Query: 650 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI-DVLED 686
+ + N ++ GA KL + NQI D+ D
Sbjct: 312 IRLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPD 349
>UNIPROTKB|J3KNP3 [details] [associations]
symbol:SLIT3 "Slit homolog 3 protein" species:9606 "Homo
sapiens" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005576
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 Pfam:PF12661 Pfam:PF01463 EMBL:AC008409
EMBL:AC008479 EMBL:AC011365 EMBL:AC011389 EMBL:AC027311
EMBL:AC094081 EMBL:AC112165 HGNC:HGNC:11087 ChiTaRS:SLIT3
OMA:SVDCHGL ProteinModelPortal:J3KNP3 Ensembl:ENST00000332966
Uniprot:J3KNP3
Length = 1530
Score = 173 (66.0 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 52/156 (33%), Positives = 79/156 (50%)
Query: 197 LDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHN---LLA 253
LDL N + +++ A L LRVL L+ N+++V A Q L+ + L L+ N +L
Sbjct: 66 LDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLP 125
Query: 254 GPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALS 313
L ST P+L+ L ++ NQ + R A G+ + +L +N I +ED +FRAL
Sbjct: 126 ELLFQST-PKLTRL---DLSENQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRALR 181
Query: 314 TLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFL 349
L L L +N I + S H+ + TL L N L
Sbjct: 182 DLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHL 217
Score = 168 (64.2 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 84/311 (27%), Positives = 131/311 (42%)
Query: 84 ISESLRGLEPDERVSL--LDCTLSNVTVLP-GKFLEGVTLHGLVISSGELKNISDGAFIG 140
I+E ++GL D VSL L + + L F + L+ L + +L+ IS G F
Sbjct: 367 ITEIVKGLF-DGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAP 425
Query: 141 LSSPLQALGLPNN-LLSVVPTSALAP-LAPN-LDRLDLSHNQLYKLENTSFKGLSSLNF- 196
L S +Q L L N + LA L N ++ + +L N + S F
Sbjct: 426 LQS-IQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFR 484
Query: 197 LDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVS---VVAALQGLRS-VTDLDLSHNLL 252
S + S +C LV R +G + S +V L VTDL L+ N +
Sbjct: 485 CSGSEDYRSRFSSECFMDLVCPEKCRCEGTIVDCSNQKLVRIPSHLPEYVTDLRLNDNEV 544
Query: 253 AGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRAL 312
+ +L +L+ +++++N+ VR GA G + L NQ++ + FR L
Sbjct: 545 SVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRVFRGL 604
Query: 313 STLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDND 372
S L L L N I VS + A LS++ L L N + +T T L SL + L N
Sbjct: 605 SGLKTLMLRSNLIGCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNP 664
Query: 373 ISMEPECIYVG 383
+ ++G
Sbjct: 665 FNCNCHLAWLG 675
Score = 161 (61.7 bits), Expect = 7.0e-10, Sum P(2) = 7.0e-10
Identities = 49/170 (28%), Positives = 76/170 (44%)
Query: 169 NLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRL 228
N +RLDL N + ++ F GL +L L L N++ + + L L LRL N+L
Sbjct: 62 NAERLDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKL 121
Query: 229 TVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGL 288
V Q +T LDLS N + G + ++ +K L + +N S + GA L
Sbjct: 122 QVLPELLFQSTPKLTRLDLSENQIQG-IPRKAFRGITDVKNLQLDNNHISCIEDGAFRAL 180
Query: 289 DKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSN 338
L L+ ++N I + SF + + L L N + LA LS+
Sbjct: 181 RDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYC--DCHLAWLSD 228
Score = 154 (59.3 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 43/155 (27%), Positives = 77/155 (49%)
Query: 234 AALQGL-RSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLT 292
A +G+ R+ LDL N + + L +L+VL + NQ S + RGA L +L
Sbjct: 54 AVPRGIPRNAERLDLDRNNITR-ITKMDFAGLKNLRVLHLEDNQVSVIERGAFQDLKQLE 112
Query: 293 SLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRAL 352
L + N++ VL + F++ L+ LDL+ N+I + + ++++ L L +N + +
Sbjct: 113 RLRLNKNKLQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCI 172
Query: 353 TQDLITPLKSLQELRLDDNDISMEPECIYVGFNTM 387
L+ L+ L L++N+IS + FN M
Sbjct: 173 EDGAFRALRDLEILTLNNNNIS---RILVTSFNHM 204
Score = 151 (58.2 bits), Expect = 1.4e-18, Sum P(3) = 1.4e-18
Identities = 53/191 (27%), Positives = 82/191 (42%)
Query: 65 ACDLPHTLRCTANKSDLYAISESL--RGLEPDERVSLLDCTLSNVTVLPGKFLEGV-TLH 121
AC P C+A D + + RG+ P LD +N+T + G+ L
Sbjct: 33 AC--PTKCTCSAASVDCHGLGLRAVPRGI-P-RNAERLDLDRNNITRITKMDFAGLKNLR 88
Query: 122 GLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLY 181
L + ++ I GAF L L+ L L N L V+P L P L RLDLS NQ+
Sbjct: 89 VLHLEDNQVSVIERGAFQDLKQ-LERLRLNKNKLQVLP-ELLFQSTPKLTRLDLSENQIQ 146
Query: 182 KLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRS 241
+ +F+G++ + L L N + + L L +L L N ++ +V + +
Sbjct: 147 GIPRKAFRGITDVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMPK 206
Query: 242 VTDLDLSHNLL 252
+ L L N L
Sbjct: 207 IRTLRLHSNHL 217
Score = 150 (57.9 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 77/281 (27%), Positives = 130/281 (46%)
Query: 109 VLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAP 168
V G F ++ L+++ +L+ + F GLS L+ L L +NL+ V A L+
Sbjct: 572 VREGAFDGAASVQELMLTGNQLETVHGRVFRGLSG-LKTLMLRSNLIGCVSNDTFAGLS- 629
Query: 169 NLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDC-LAPLVT-LRVLRL-QG 225
++ L L N++ + +F L SL+ ++L N + +C LA L LR R+ G
Sbjct: 630 SVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPF---NCNCHLAWLGKWLRKRRIVSG 686
Query: 226 N-RLTVSVVAALQGLRSVTDLDLS---HNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVR 281
N R ++ V D + + + L P + + ++ + N+
Sbjct: 687 NPRCQKPFFLKEIPIQDVAIQDFTCDGNEESSCQLSPRCPEQCTCMETVVRCSNKGL--- 743
Query: 282 RGALAGLDK-LTSLSCHHNQIDVLEDHSFRALSTLSHL---DLAHNRIVAVSGASLAHLS 337
R G+ K +T L N + + R LS L HL DL++N I ++ + +++S
Sbjct: 744 RALPRGMPKDVTELYLEGNHLTAVP----RELSALRHLTLIDLSNNSISMLTNYTFSNMS 799
Query: 338 NLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPE 378
+L+TL LS+N LR + L+SL+ L L NDIS PE
Sbjct: 800 HLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPE 840
Score = 146 (56.5 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 81/314 (25%), Positives = 137/314 (43%)
Query: 89 RGLEPD-ERVSLLDCTLSNVTVLPGKFLEGVT-LHGLVISSGELKNISDGAFIGLSSPLQ 146
RG D +++ L + + VLP + L L +S +++ I AF G++ ++
Sbjct: 102 RGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGITD-VK 160
Query: 147 ALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMT 206
L L NN +S + A L +L+ L L++N + ++ TSF + + L L N L
Sbjct: 161 NLQLDNNHISCIEDGAFRALR-DLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYC 219
Query: 207 LSQDC-LAPLVT-LRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLG--PS-TV 261
DC LA L LR R G L+G +V D+ + P PS
Sbjct: 220 ---DCHLAWLSDWLRQRRTVGQFTLCMAPVHLRGF-NVADVQKKEYVCPAPHSEPPSCNA 275
Query: 262 PRLSSLKVLSIAHNQFSSVRRGAL---AGLDK-LTSLSCHHNQIDVLEDHSFRALSTLSH 317
+S + ++N +G + A L + + + N I + +F L
Sbjct: 276 NSISCPSPCTCSNNIVDCRGKGLMEIPANLPEGIVEIRLEQNSIKAIPAGAFTQYKKLKR 335
Query: 318 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEP 377
+D++ N+I ++ + L +LT+L L N + + + L L SLQ L L+ N I+
Sbjct: 336 IDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIVKGLFDGLVSLQLLLLNANKIN--- 392
Query: 378 ECIYVGFNTM-DLE 390
C+ V NT DL+
Sbjct: 393 -CLRV--NTFQDLQ 403
Score = 142 (55.0 bits), Expect = 1.4e-18, Sum P(3) = 1.4e-18
Identities = 43/131 (32%), Positives = 64/131 (48%)
Query: 242 VTDLDLSHNLL-AGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQ 300
+ ++ L N + A P G T + LK + I+ NQ S + A GL LTSL + N+
Sbjct: 309 IVEIRLEQNSIKAIPAGAFT--QYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNK 366
Query: 301 IDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPL 360
I + F L +L L L N+I + + L NL L L N L+ +++ L PL
Sbjct: 367 ITEIVKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPL 426
Query: 361 KSLQELRLDDN 371
+S+Q L L N
Sbjct: 427 QSIQTLHLAQN 437
Score = 133 (51.9 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 38/128 (29%), Positives = 61/128 (47%)
Query: 150 LPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQ 209
L N + +P A L R+D+S NQ+ + +F+GL SL L L NK+ + +
Sbjct: 314 LEQNSIKAIPAGAFTQYK-KLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIVK 372
Query: 210 DCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKV 269
LV+L++L L N++ V Q L+++ L L N L + L S++
Sbjct: 373 GLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQ-TISKGLFAPLQSIQT 431
Query: 270 LSIAHNQF 277
L +A N F
Sbjct: 432 LHLAQNPF 439
Score = 128 (50.1 bits), Expect = 0.00036, P = 0.00036
Identities = 39/113 (34%), Positives = 58/113 (51%)
Query: 140 GLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDL 199
G+ + L L N L+ VP L+ L +L +DLS+N + L N +F +S L+ L L
Sbjct: 749 GMPKDVTELYLEGNHLTAVPRE-LSALR-HLTLIDLSNNSISMLTNYTFSNMSHLSTLIL 806
Query: 200 SYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLL 252
SYN+L + L +LRVL L GN ++ + L S++ L L N L
Sbjct: 807 SYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPL 859
Score = 119 (46.9 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 67/299 (22%), Positives = 121/299 (40%)
Query: 105 SNVTVLP-GKFLEGVTLHGLVISSGELKNISDGAFIGLSSP-LQALGLPNNLLSVVPTSA 162
+ V+V+ G F + L L ++ +L+ + + F S+P L L L N + +P A
Sbjct: 95 NQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLF--QSTPKLTRLDLSENQIQGIPRKA 152
Query: 163 LAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLR 222
+ ++ L L +N + +E+ +F+ L L L L+ N + + + +R LR
Sbjct: 153 FRGIT-DVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMPKIRTLR 211
Query: 223 LQGNRLTVSV-VAALQG-LRSVTDLDLSHNLLAGPL---GPSTVPRLSSLKVLSIAHNQF 277
L N L +A L LR + L P+ G + V H++
Sbjct: 212 LHSNHLYCDCHLAWLSDWLRQRRTVG-QFTLCMAPVHLRGFNVADVQKKEYVCPAPHSEP 270
Query: 278 SSVRRGALAGLDKLTSLSCHHNQIDV----LEDHSFRALSTLSHLDLAHNRIVAVSGASL 333
S +++ T C +N +D L + + + L N I A+ +
Sbjct: 271 PSCNANSISCPSPCT---CSNNIVDCRGKGLMEIPANLPEGIVEIRLEQNSIKAIPAGAF 327
Query: 334 AHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELI 392
L +D+S N + + D LKSL L L N I+ + ++ G ++ L L+
Sbjct: 328 TQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIVKGLFDGLVSLQLLLL 386
Score = 101 (40.6 bits), Expect = 8.3e-12, Sum P(2) = 8.3e-12
Identities = 32/116 (27%), Positives = 57/116 (49%)
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 317
P +P+ + L + N ++V R L+ L LT + +N I +L +++F +S LS
Sbjct: 747 PRGMPK--DVTELYLEGNHLTAVPR-ELSALRHLTLIDLSNNSISMLTNYTFSNMSHLST 803
Query: 318 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 373
L L++NR+ + + L +L L L N + ++ + L SL L L N +
Sbjct: 804 LILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPL 859
Score = 93 (37.8 bits), Expect = 1.4e-13, Sum P(3) = 1.4e-13
Identities = 29/116 (25%), Positives = 51/116 (43%)
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 317
P+ +P + + + N ++ GA KL + NQI + +F+ L +L+
Sbjct: 302 PANLPE--GIVEIRLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTS 359
Query: 318 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 373
L L N+I + L +L L L+ N + L + L++L L L DN +
Sbjct: 360 LVLYGNKITEIVKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKL 415
Score = 83 (34.3 bits), Expect = 2.5e-11, Sum P(3) = 2.5e-11
Identities = 30/127 (23%), Positives = 59/127 (46%)
Query: 291 LTSLSCHHNQIDVLEDHS-FRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFL 349
+T L + N++ VLE F+ L L ++L++N+I V + +++ L L+ N L
Sbjct: 534 VTDLRLNDNEVSVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQL 593
Query: 350 RALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELIYSGVWRHSTLLIPVMLS 409
+ + L L+ L L N I + G +++ L +Y R +T+ +
Sbjct: 594 ETVHGRVFRGLSGLKTLMLRSNLIGCVSNDTFAGLSSVRLLSLYDN--RITTITPGAFTT 651
Query: 410 LCTRSSV 416
L + S++
Sbjct: 652 LVSLSTI 658
Score = 72 (30.4 bits), Expect = 1.4e-18, Sum P(3) = 1.4e-18
Identities = 18/67 (26%), Positives = 34/67 (50%)
Query: 630 SDSRYVKLQATTIL--LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDH 687
+D+ L+AT I L +L+ +++++N+ VR GA G + L NQ++ +
Sbjct: 540 NDNEVSVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGR 599
Query: 688 SFSNVIG 694
F + G
Sbjct: 600 VFRGLSG 606
Score = 66 (28.3 bits), Expect = 5.2e-09, Sum P(3) = 5.2e-09
Identities = 21/73 (28%), Positives = 35/73 (47%)
Query: 315 LSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 374
++ L L N + AV L+ L +LT +DLS+N + LT + + L L L N +
Sbjct: 754 VTELYLEGNHLTAVP-RELSALRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNRLR 812
Query: 375 MEPECIYVGFNTM 387
P + G ++
Sbjct: 813 CIPVHAFNGLRSL 825
Score = 65 (27.9 bits), Expect = 7.5e-18, Sum P(3) = 7.5e-18
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNVI 693
LS LK L + N V AGL + LS + N+I + +F+ ++
Sbjct: 604 LSGLKTLMLRSNLIGCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLV 653
Score = 65 (27.9 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 647 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNVI 693
LK + I+ NQ S + A GL LTSL + N+I + F ++
Sbjct: 333 LKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIVKGLFDGLV 379
Score = 60 (26.2 bits), Expect = 2.4e-17, Sum P(3) = 2.4e-17
Identities = 18/65 (27%), Positives = 31/65 (47%)
Query: 628 NNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDH 687
NNS S + +S L L +++N+ + A GL L L+ H N I + +
Sbjct: 784 NNSISMLTNYTFSN--MSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEG 841
Query: 688 SFSNV 692
SF+++
Sbjct: 842 SFNDL 846
Score = 55 (24.4 bits), Expect = 7.9e-17, Sum P(3) = 7.9e-17
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 650 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L + N ++V R L+ L LT + +N I +L +++FSN+
Sbjct: 757 LYLEGNHLTAVPR-ELSALRHLTLIDLSNNSISMLTNYTFSNM 798
Score = 54 (24.1 bits), Expect = 1.0e-16, Sum P(3) = 1.0e-16
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
L SL+VL++ N SSV G+ L L+ L+ N +
Sbjct: 822 LRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPL 859
Score = 52 (23.4 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L SL L + N+ + + +G GL L L + N+I+ L ++F ++
Sbjct: 354 LKSLTSLVLYGNKITEIVKGLFDGLVSLQLLLLNANKINCLRVNTFQDL 402
Score = 51 (23.0 bits), Expect = 2.0e-16, Sum P(3) = 2.0e-16
Identities = 11/36 (30%), Positives = 23/36 (63%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 679
LSS+++LS+ N+ +++ GA L L++++ N
Sbjct: 628 LSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSN 663
Score = 50 (22.7 bits), Expect = 2.6e-16, Sum P(3) = 2.6e-16
Identities = 16/68 (23%), Positives = 32/68 (47%)
Query: 625 INRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL 684
IN +N+ + V+ + +S++ L + NQ +V GL L +L N I +
Sbjct: 562 INLSNNKIKEVR-EGAFDGAASVQELMLTGNQLETVHGRVFRGLSGLKTLMLRSNLIGCV 620
Query: 685 EDHSFSNV 692
+ +F+ +
Sbjct: 621 SNDTFAGL 628
Score = 49 (22.3 bits), Expect = 3.2e-16, Sum P(3) = 3.2e-16
Identities = 9/49 (18%), Positives = 26/49 (53%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L ++ +++N S + + + L++L +N++ + H+F+ +
Sbjct: 774 LRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNRLRCIPVHAFNGL 822
Score = 40 (19.1 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 10/38 (26%), Positives = 16/38 (42%)
Query: 650 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI-DVLED 686
+ + N ++ GA KL + NQI D+ D
Sbjct: 312 IRLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPD 349
>UNIPROTKB|Q6PEZ8 [details] [associations]
symbol:PODNL1 "Podocan-like protein 1" species:9606 "Homo
sapiens" [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
GO:GO:0005578 InterPro:IPR003591 SMART:SM00369 EMBL:CH471106
InterPro:IPR000372 SMART:SM00013 HSSP:P07359 EMBL:AC020916
HOVERGEN:HBG059195 OrthoDB:EOG42V8FX HOGENOM:HOG000231119
EMBL:AK027100 EMBL:AK298489 EMBL:BC057786 IPI:IPI00302227
IPI:IPI00412448 RefSeq:NP_001139726.1 RefSeq:NP_001139727.1
RefSeq:NP_079101.3 UniGene:Hs.448497 ProteinModelPortal:Q6PEZ8
SMR:Q6PEZ8 PhosphoSite:Q6PEZ8 DMDM:296452863 PaxDb:Q6PEZ8
PRIDE:Q6PEZ8 Ensembl:ENST00000339560 Ensembl:ENST00000538371
Ensembl:ENST00000538517 GeneID:79883 KEGG:hsa:79883 UCSC:uc002mxr.3
CTD:79883 GeneCards:GC19M014044 HGNC:HGNC:26275 HPA:HPA042807
neXtProt:NX_Q6PEZ8 PharmGKB:PA162399855 eggNOG:NOG305076
InParanoid:Q6PEZ8 OMA:HVGPEAF PhylomeDB:Q6PEZ8 GenomeRNAi:79883
NextBio:69683 ArrayExpress:Q6PEZ8 Bgee:Q6PEZ8 CleanEx:HS_PODNL1
Genevestigator:Q6PEZ8 Uniprot:Q6PEZ8
Length = 512
Score = 252 (93.8 bits), Expect = 2.0e-18, P = 2.0e-18
Identities = 110/337 (32%), Positives = 157/337 (46%)
Query: 68 LPHTLRCT-ANKSDLYAISESLRGLEPDER-VSLLDCTLSNVTVLPGKFLEGVTLHGLVI 125
LP +LR + + I G +P R V L + LSN + P F + L +
Sbjct: 143 LPRSLRVADLAANQVMEIFPLTFGEKPALRSVYLHNNQLSNAGLPPDAFRGSEAIATLSL 202
Query: 126 SSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYK--L 183
S+ +L + L L+ L L NNL+S VP AL+ L L L HNQL L
Sbjct: 203 SNNQLSYLPPS----LPPSLERLHLQNNLISKVPRGALSRQT-QLRELYLQHNQLTDSGL 257
Query: 184 ENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVT 243
+ T+F L SL +LDLS+N+L T+ P TL +L L NR+ A L G R +
Sbjct: 258 DATTFSKLHSLEYLDLSHNQLTTVPAGL--PR-TLAILHLGRNRIRQVEAARLHGARGLR 314
Query: 244 DLDLSHNLLAGPLGPSTVPR--LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 301
L L HN LG S +P L L+ L H + + R A +L +L HN +
Sbjct: 315 YLLLQHN----QLGSSGLPAGALRPLRGLHTLHLYGNGLDRVPPALPRRLRALVLPHNHV 370
Query: 302 DVLEDHSFRALSTLSHLDLAHNRIVA--VSGASLAHLSNLTTLDLSHNFLRALTQDLITP 359
L A L+ L+LA+NR+ + V + L L +LDL+ N L L L T
Sbjct: 371 AALGARDLVATPGLTELNLAYNRLASARVHHRAFRRLRALRSLDLAGNQLTRLPMGLPTG 430
Query: 360 LKSLQELRLDDNDISM-EPECIYVGFNTM-DLELIYS 394
L++LQ L N + M EPE + G + + +L L ++
Sbjct: 431 LRTLQ---LQRNQLRMLEPEPL-AGLDQLRELSLAHN 463
Score = 209 (78.6 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 84/284 (29%), Positives = 132/284 (46%)
Query: 96 RVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLL 155
RV +DC ++ V P H L + + +L+ + LS L+ L L NNL+
Sbjct: 54 RVDTVDCDGLDLRVFPDNITRAAQ-H-LSLQNNQLQELPYNELSRLSG-LRTLNLHNNLI 110
Query: 156 SV--VPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLA 213
S +P A L L L ++HN+L + SL DL+ N++M +
Sbjct: 111 SSEGLPDEAFESLT-QLQHLCVAHNKLSVAPQFLPR---SLRVADLAANQVMEIFPLTFG 166
Query: 214 PLVTLRVLRLQGNRLTVSVVA--ALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLS 271
LR + L N+L+ + + A +G ++ L LS+N L+ L PS P SL+ L
Sbjct: 167 EKPALRSVYLHNNQLSNAGLPPDAFRGSEAIATLSLSNNQLSY-LPPSLPP---SLERLH 222
Query: 272 IAHNQFSSVRRGALAGLDKLTSLSCHHNQI--DVLEDHSFRALSTLSHLDLAHNRIVAVS 329
+ +N S V RGAL+ +L L HNQ+ L+ +F L +L +LDL+HN++ V
Sbjct: 223 LQNNLISKVPRGALSRQTQLRELYLQHNQLTDSGLDATTFSKLHSLEYLDLSHNQLTTVP 282
Query: 330 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 373
A L L L L N +R + + + L+ L L N +
Sbjct: 283 -AGLPR--TLAILHLGRNRIRQVEAARLHGARGLRYLLLQHNQL 323
Score = 165 (63.1 bits), Expect = 8.2e-09, P = 8.2e-09
Identities = 90/300 (30%), Positives = 123/300 (41%)
Query: 61 NDLCACDLP-HTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSN--VTVLP-GKFLE 116
N L LP R + + L + L L P SL L N ++ +P G
Sbjct: 179 NQLSNAGLPPDAFRGSEAIATLSLSNNQLSYLPPSLPPSLERLHLQNNLISKVPRGALSR 238
Query: 117 GVTLHGLVISSGELKNIS-DGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDL 175
L L + +L + D L+ L L +N L+ VP A L L L L
Sbjct: 239 QTQLRELYLQHNQLTDSGLDATTFSKLHSLEYLDLSHNQLTTVP----AGLPRTLAILHL 294
Query: 176 SHNQLYKLENTSFKGLSSLNFLDLSYNKLMT--LSQDCLAPLVTLRVLRLQGNRLTVSVV 233
N++ ++E G L +L L +N+L + L L PL L L L GN L V
Sbjct: 295 GRNRIRQVEAARLHGARGLRYLLLQHNQLGSSGLPAGALRPLRGLHTLHLYGNGLD-RVP 353
Query: 234 AALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVR--RGALAGLDKL 291
AL R + L L HN +A LG + L L++A+N+ +S R A L L
Sbjct: 354 PALP--RRLRALVLPHNHVAA-LGARDLVATPGLTELNLAYNRLASARVHHRAFRRLRAL 410
Query: 292 TSLSCHHNQIDVLEDHSFRALST-LSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLR 350
SL NQ+ L L T L L L N++ + LA L L L L+HN LR
Sbjct: 411 RSLDLAGNQLTRLP----MGLPTGLRTLQLQRNQLRMLEPEPLAGLDQLRELSLAHNRLR 466
Score = 139 (54.0 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 66/216 (30%), Positives = 91/216 (42%)
Query: 140 GLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYK--LENTSFKGLSSLNFL 197
GL L L L N + V + L A L L L HNQL L + + L L+ L
Sbjct: 284 GLPRTLAILHLGRNRIRQVEAARLHG-ARGLRYLLLQHNQLGSSGLPAGALRPLRGLHTL 342
Query: 198 DLSYNKLMTLSQDCLAPLVT--LRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGP 255
L N L D + P + LR L L N + L +T+L+L++N LA
Sbjct: 343 HLYGNGL-----DRVPPALPRRLRALVLPHNHVAALGARDLVATPGLTELNLAYNRLASA 397
Query: 256 -LGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALST 314
+ RL +L+ L +A NQ + + G GL +L NQ+ +LE L
Sbjct: 398 RVHHRAFRRLRALRSLDLAGNQLTRLPMGLPTGL---RTLQLQRNQLRMLEPEPLAGLDQ 454
Query: 315 LSHLDLAHNRI-VAVSGASLAHLSNLTTLDLSHNFL 349
L L LAHNR+ V G H L L + H +
Sbjct: 455 LRELSLAHNRLRVGDIGPGTWH--ELQALQVRHRLV 488
Score = 133 (51.9 bits), Expect = 7.1e-08, Sum P(2) = 7.1e-08
Identities = 62/212 (29%), Positives = 96/212 (45%)
Query: 173 LDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMT--LSQDCLAPLVTLRVLRLQGNRLTV 230
L L +NQL +L LS L L+L N + + L + L L+ L + N+L+V
Sbjct: 79 LSLQNNQLQELPYNELSRLSGLRTLNLHNNLISSEGLPDEAFESLTQLQHLCVAHNKLSV 138
Query: 231 SVVAALQGL-RSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSS--VRRGALAG 287
A Q L RS+ DL+ N + + P T +L+ + + +NQ S+ + A G
Sbjct: 139 ----APQFLPRSLRVADLAANQVM-EIFPLTFGEKPALRSVYLHNNQLSNAGLPPDAFRG 193
Query: 288 LDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHN 347
+ + +LS +NQ+ L +L L L +N I V +L+ + L L L HN
Sbjct: 194 SEAIATLSLSNNQLSYLPPS---LPPSLERLHLQNNLISKVPRGALSRQTQLRELYLQHN 250
Query: 348 FLRALTQDLIT--PLKSLQELRLDDNDISMEP 377
L D T L SL+ L L N ++ P
Sbjct: 251 QLTDSGLDATTFSKLHSLEYLDLSHNQLTTVP 282
Score = 129 (50.5 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 63/209 (30%), Positives = 94/209 (44%)
Query: 100 LDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLL--SV 157
LD + + +T +P TL L + ++ + G L+ L L +N L S
Sbjct: 271 LDLSHNQLTTVPAGLPR--TLAILHLGRNRIRQVEAARLHGARG-LRYLLLQHNQLGSSG 327
Query: 158 VPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVT 217
+P AL PL L L L N L ++ + L +L L +N + L L
Sbjct: 328 LPAGALRPLR-GLHTLHLYGNGLDRVPPALPRRLRALV---LPHNHVAALGARDLVATPG 383
Query: 218 LRVLRLQGNRLTVSVV--AALQGLRSVTDLDLSHNLLAG-PLGPSTVPRLSSLKVLSIAH 274
L L L NRL + V A + LR++ LDL+ N L P+G +P + L+ L +
Sbjct: 384 LTELNLAYNRLASARVHHRAFRRLRALRSLDLAGNQLTRLPMG---LP--TGLRTLQLQR 438
Query: 275 NQFSSVRRGALAGLDKLTSLSCHHNQIDV 303
NQ + LAGLD+L LS HN++ V
Sbjct: 439 NQLRMLEPEPLAGLDQLRELSLAHNRLRV 467
Score = 100 (40.3 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 33/119 (27%), Positives = 61/119 (51%)
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI--DVLEDHSFRALSTL 315
P + R + + LS+ +NQ + L+ L L +L+ H+N I + L D +F +L+ L
Sbjct: 69 PDNITRAA--QHLSLQNNQLQELPYNELSRLSGLRTLNLHNNLISSEGLPDEAFESLTQL 126
Query: 316 SHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 374
HL +AHN++ +V+ L +L DL+ N + + +L+ + L +N +S
Sbjct: 127 QHLCVAHNKL-SVAPQFLPR--SLRVADLAANQVMEIFPLTFGEKPALRSVYLHNNQLS 182
Score = 70 (29.7 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 643 LLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDV 683
L + L+ L + NQ + LAGLD+L LS HN++ V
Sbjct: 427 LPTGLRTLQLQRNQLRMLEPEPLAGLDQLRELSLAHNRLRV 467
Score = 50 (22.7 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 15/47 (31%), Positives = 21/47 (44%)
Query: 638 QATTI---LLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
Q TT+ L +L +L + N+ V L G L L HNQ+
Sbjct: 277 QLTTVPAGLPRTLAILHLGRNRIRQVEAARLHGARGLRYLLLQHNQL 323
Score = 48 (22.0 bits), Expect = 5.3e-14, Sum P(2) = 5.3e-14
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLE 685
L +L+ L +A NQ + + G GL +L NQ+ +LE
Sbjct: 407 LRALRSLDLAGNQLTRLPMGLPTGL---RTLQLQRNQLRMLE 445
Score = 40 (19.1 bits), Expect = 3.6e-13, Sum P(2) = 3.6e-13
Identities = 9/35 (25%), Positives = 18/35 (51%)
Query: 647 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
L+ L + HN +++ L LT L+ +N++
Sbjct: 360 LRALVLPHNHVAALGARDLVATPGLTELNLAYNRL 394
>ZFIN|ZDB-GENE-050506-80 [details] [associations]
symbol:lrrtm1 "leucine rich repeat transmembrane
neuronal 1" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IDA] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-050506-80 InterPro:IPR003591 SMART:SM00369
GO:GO:0042802 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104056 EMBL:CU076051 CTD:347730
HOGENOM:HOG000290681 HOVERGEN:HBG052362 KO:K16665 OMA:EPDLFHG
IPI:IPI00493041 RefSeq:XP_003197743.1 UniGene:Dr.12811
ProteinModelPortal:B8JKM0 IntAct:B8JKM0 Ensembl:ENSDART00000133917
GeneID:570385 KEGG:dre:570385 NextBio:20890105 ArrayExpress:B8JKM0
Bgee:B8JKM0 Uniprot:B8JKM0
Length = 524
Score = 252 (93.8 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 81/273 (29%), Positives = 122/273 (44%)
Query: 100 LDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVP 159
L C N+T +P + GL + + + +G F+GLS L L L +N + +V
Sbjct: 52 LYCEGLNLTDIPQNLSSAI---GLSLRENNISELREGNFVGLSQ-LTWLYLDHNNIEIVE 107
Query: 160 TSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLR 219
SA L + LDLS N++ L N +F+ L +L LDLSYN+L +L D L L
Sbjct: 108 ESAFERLR-RIKELDLSTNRIESLPNGTFRPLPNLRILDLSYNRLQSLEPDLFHGLRKLT 166
Query: 220 VLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSS 279
L L+ N L V Q RS+ LDL +N L L ++ L L L + HN+
Sbjct: 167 NLHLRYNALKFIPVRIFQDCRSMQFLDLGYNQLQS-LARNSFAGLFKLTELHLEHNELVK 225
Query: 280 VRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNL 339
V L L +L +N+ ++ + L +D ++N I + + L
Sbjct: 226 VNLAHFPRLISLRTLYMRNNKATIVVNTLEWTWDYLEKIDFSNNEIEYIEPHVFESVPKL 285
Query: 340 TTLDLSHNFLRALTQDLITPLKSLQELRLDDND 372
TL L N L + Q ++ SL + L ND
Sbjct: 286 NTLMLDSNKLTYIDQRILDSWTSLSSITLSGND 318
Score = 219 (82.2 bits), Expect = 9.9e-15, P = 9.9e-15
Identities = 72/260 (27%), Positives = 116/260 (44%)
Query: 141 LSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLS 200
LSS + L L N +S + L+ L L L HN + +E ++F+ L + LDLS
Sbjct: 66 LSSAI-GLSLRENNISELREGNFVGLS-QLTWLYLDHNNIEIVEESAFERLRRIKELDLS 123
Query: 201 YNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPST 260
N++ +L PL LR+L L NRL GLR +T+L L +N L +
Sbjct: 124 TNRIESLPNGTFRPLPNLRILDLSYNRLQSLEPDLFHGLRKLTNLHLRYNALKF-IPVRI 182
Query: 261 VPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 320
S++ L + +NQ S+ R + AGL KLT L HN++ + F L +L L +
Sbjct: 183 FQDCRSMQFLDLGYNQLQSLARNSFAGLFKLTELHLEHNELVKVNLAHFPRLISLRTLYM 242
Query: 321 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECI 380
+N+ V L +D S+N + + + + L L LD N ++ + I
Sbjct: 243 RNNKATIVVNTLEWTWDYLEKIDFSNNEIEYIEPHVFESVPKLNTLMLDSNKLTYIDQRI 302
Query: 381 YVGFNTMDLELIYSGVWRHS 400
+ ++ + W S
Sbjct: 303 LDSWTSLSSITLSGNDWECS 322
Score = 197 (74.4 bits), Expect = 6.1e-16, Sum P(2) = 6.1e-16
Identities = 51/141 (36%), Positives = 76/141 (53%)
Query: 256 LGPSTVPR-LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALST 314
L + +P+ LSS LS+ N S +R G GL +LT L HN I+++E+ +F L
Sbjct: 57 LNLTDIPQNLSSAIGLSLRENNISELREGNFVGLSQLTWLYLDHNNIEIVEESAFERLRR 116
Query: 315 LSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 374
+ LDL+ NRI ++ + L NL LDLS+N L++L DL L+ L L L N +
Sbjct: 117 IKELDLSTNRIESLPNGTFRPLPNLRILDLSYNRLQSLEPDLFHGLRKLTNLHLRYNALK 176
Query: 375 MEPECIYVGFNTMD-LELIYS 394
P I+ +M L+L Y+
Sbjct: 177 FIPVRIFQDCRSMQFLDLGYN 197
Score = 80 (33.2 bits), Expect = 6.1e-16, Sum P(2) = 6.1e-16
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 646 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
S++ L + +NQ S+ R + AGL KLT L HN++
Sbjct: 188 SMQFLDLGYNQLQSLARNSFAGLFKLTELHLEHNEL 223
Score = 50 (22.7 bits), Expect = 8.0e-13, Sum P(2) = 8.0e-13
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L SL+ L + +N+ + V D L + +N+I+ +E H F +V
Sbjct: 234 LISLRTLYMRNNKATIVVNTLEWTWDYLEKIDFSNNEIEYIEPHVFESV 282
>FB|FBgn0028888 [details] [associations]
symbol:CG4168 species:7227 "Drosophila melanogaster"
[GO:0004930 "G-protein coupled receptor activity" evidence=ISS]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 EMBL:AE014134
InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
HSSP:Q9BZR6 FlyBase:FBgn0028888 RefSeq:NP_609740.4
ProteinModelPortal:Q9VJQ0 SMR:Q9VJQ0 IntAct:Q9VJQ0 MINT:MINT-294601
GeneID:34889 KEGG:dme:Dmel_CG4168 UCSC:CG4168-RA InParanoid:Q9VJQ0
PhylomeDB:Q9VJQ0 GenomeRNAi:34889 NextBio:790724
ArrayExpress:Q9VJQ0 Bgee:Q9VJQ0 Uniprot:Q9VJQ0
Length = 1443
Score = 259 (96.2 bits), Expect = 2.3e-18, Sum P(2) = 2.3e-18
Identities = 87/307 (28%), Positives = 150/307 (48%)
Query: 97 VSLLDCTLSNVTVLP-GKFLEGVTLHGLVI--SSGELKNISDGAFIGLSSPLQALGLPNN 153
+S ++ + + + LP G F H + I S L+ + F L LQ L L +N
Sbjct: 727 LSYINLSFNQLKTLPRGLFQSDAHSHLVEIDLSYNGLERLEAQTFHSLGD-LQTLNLQSN 785
Query: 154 LLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLS-QDCL 212
L + A L L LDLS+N+L + + +F L +L LDL +N+L +LS + L
Sbjct: 786 RLRTIARHAFHNLE-FLRYLDLSYNRLVNISHGAFTVLPNLAALDLMHNQLCSLSLKSFL 844
Query: 213 APLVTLRVLRLQ-GNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLS 271
T LRL + S L + LD+SHN + S ++L+ L+
Sbjct: 845 YVSNTTTPLRLNVSHNHIASFYDELSSYMYIYQLDISHNHVTK--SDSFTNLANTLRFLN 902
Query: 272 IAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGA 331
+AHNQ S++ A L+ L L+ HN + L SF+ L++L LDL+HN++ +
Sbjct: 903 LAHNQLGSLQSHAFGDLEFLEILNVAHNNLTSLRRRSFQGLNSLQELDLSHNQLDQLQVE 962
Query: 332 SLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIY--VGFNTMDL 389
++L L L ++ N LRAL +++ + L+ L + +N +S+ P + +GF +
Sbjct: 963 QFSNLRKLRILRINSNRLRALPREVFMNTR-LEFLDIAENQLSVWPVPAFTDIGFTLRSI 1021
Query: 390 ELIYSGV 396
++ ++ +
Sbjct: 1022 QMSHNNL 1028
Score = 240 (89.5 bits), Expect = 7.0e-16, Sum P(2) = 7.0e-16
Identities = 89/304 (29%), Positives = 147/304 (48%)
Query: 62 DLCACDLPHTLRCTAN-KSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTL 120
+L A DL H C+ + KS LY +S + L L+ + +++ + + +
Sbjct: 824 NLAALDLMHNQLCSLSLKSFLY-VSNTTTPLR-------LNVSHNHIASFYDELSSYMYI 875
Query: 121 HGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQL 180
+ L IS + SD +F L++ L+ L L +N L + + A L L+ L+++HN L
Sbjct: 876 YQLDISHNHVTK-SD-SFTNLANTLRFLNLAHNQLGSLQSHAFGDLE-FLEILNVAHNNL 932
Query: 181 YKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLR 240
L SF+GL+SL LDLS+N+L L + + L LR+LR+ NRL R
Sbjct: 933 TSLRRRSFQGLNSLQELDLSHNQLDQLQVEQFSNLRKLRILRINSNRLRALPREVFMNTR 992
Query: 241 SVTDLDLSHNLLA-GPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 299
+ LD++ N L+ P+ P+ +L+ + ++HN + L +S N
Sbjct: 993 -LEFLDIAENQLSVWPV-PAFTDIGFTLRSIQMSHNNLEYLDASMFINSQFLYDISLARN 1050
Query: 300 QIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASL-AHLSNLTTLDLSHNFLRALTQDLIT 358
+I +L D++F L+ L++LDL+ N +V + + H L L L H L L L
Sbjct: 1051 RITILPDNTFSFLNNLTNLDLSQNPLVTTNLREVFVHTPRLRKLSLHHMGLYVLPP-LKL 1109
Query: 359 PLKS 362
PL S
Sbjct: 1110 PLLS 1113
Score = 198 (74.8 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 81/321 (25%), Positives = 150/321 (46%)
Query: 95 ERVSLLDCTLSN-VTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSS---PLQALGL 150
E + LD + + V + G F L L + +L ++S +F+ +S+ PL+ L +
Sbjct: 799 EFLRYLDLSYNRLVNISHGAFTVLPNLAALDLMHNQLCSLSLKSFLYVSNTTTPLR-LNV 857
Query: 151 PNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSS-LNFLDLSYNKLMTLSQ 209
+N ++ + + + +LD+SHN + K + SF L++ L FL+L++N+L +L
Sbjct: 858 SHNHIASFYDELSSYMY--IYQLDISHNHVTKSD--SFTNLANTLRFLNLAHNQLGSLQS 913
Query: 210 DCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKV 269
L L +L + N LT + QGL S+ +LDLSHN L L L L++
Sbjct: 914 HAFGDLEFLEILNVAHNNLTSLRRRSFQGLNSLQELDLSHNQL-DQLQVEQFSNLRKLRI 972
Query: 270 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALS-TLSHLDLAHNRIVAV 328
L I N+ ++ R +L L NQ+ V +F + TL + ++HN + +
Sbjct: 973 LRINSNRLRALPREVFMNT-RLEFLDIAENQLSVWPVPAFTDIGFTLRSIQMSHNNLEYL 1031
Query: 329 SGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDND-ISMEPECIYVGFNTM 387
+ + L + L+ N + L + + L +L L L N ++ ++V +
Sbjct: 1032 DASMFINSQFLYDISLARNRITILPDNTFSFLNNLTNLDLSQNPLVTTNLREVFVHTPRL 1091
Query: 388 -DLELIYSGVWRHSTLLIPVM 407
L L + G++ L +P++
Sbjct: 1092 RKLSLHHMGLYVLPPLKLPLL 1112
Score = 173 (66.0 bits), Expect = 2.9e-15, Sum P(2) = 2.9e-15
Identities = 68/231 (29%), Positives = 111/231 (48%)
Query: 153 NLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQ--- 209
+L S+ P AL PL+ L L L +N L ++ N SF + L++++LS+N+L TL +
Sbjct: 687 SLESLDPLDALLPLS-QLIWLGLDNNNLKQVSNESFAQMRELSYINLSFNQLKTLPRGLF 745
Query: 210 --DCLAPLVTLRVLRLQG-NRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSS 266
D + LV + L G RL +L L++ L+L N L + L
Sbjct: 746 QSDAHSHLVEID-LSYNGLERLEAQTFHSLGDLQT---LNLQSNRLR-TIARHAFHNLEF 800
Query: 267 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLS---HLDLAHN 323
L+ L +++N+ ++ GA L L +L HNQ+ L SF +S + L+++HN
Sbjct: 801 LRYLDLSYNRLVNISHGAFTVLPNLAALDLMHNQLCSLSLKSFLYVSNTTTPLRLNVSHN 860
Query: 324 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPL-KSLQELRLDDNDI 373
I + L+ + LD+SHN + D T L +L+ L L N +
Sbjct: 861 HIASFYD-ELSSYMYIYQLDISHNHVTK--SDSFTNLANTLRFLNLAHNQL 908
Score = 172 (65.6 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 73/279 (26%), Positives = 125/279 (44%)
Query: 95 ERVSLLDCTLSNVTVLPGKFLEGV-TLHGLVISSGELKNISDGAFIGLSSPLQALGLPNN 153
E + +L+ +N+T L + +G+ +L L +S +L + F L L+ L + +N
Sbjct: 920 EFLEILNVAHNNLTSLRRRSFQGLNSLQELDLSHNQLDQLQVEQFSNLRK-LRILRINSN 978
Query: 154 LLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLS-SLNFLDLSYNKLMTLSQDCL 212
L +P + L+ LD++ NQL +F + +L + +S+N L L
Sbjct: 979 RLRALPREVF--MNTRLEFLDIAENQLSVWPVPAFTDIGFTLRSIQMSHNNLEYLDASMF 1036
Query: 213 APLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSI 272
L + L NR+T+ L ++T+LDLS N L L+ LS+
Sbjct: 1037 INSQFLYDISLARNRITILPDNTFSFLNNLTNLDLSQNPLVTTNLREVFVHTPRLRKLSL 1096
Query: 273 AHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGAS 332
H + L L+ L N + L +L L H++++HN++ S A+
Sbjct: 1097 HHMGLYVLPP---LKLPLLSYLDVSGNYLQELSP--LGSLRHLRHVNVSHNKLTNASCAA 1151
Query: 333 LAHLS-NLTTLDLSHNFLRALTQDLITPLKSLQELRLDD 370
HL ++ LDL+HN LR +T + L+ L EL + D
Sbjct: 1152 -EHLPPSVRVLDLAHNPLRRITLHDLASLRHLAELNILD 1189
Score = 136 (52.9 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 79/300 (26%), Positives = 130/300 (43%)
Query: 77 NKSDLYAISESLRGLE--PDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNIS 134
N LY IS + + PD S L+ L+N+ + + L + + + L+ +S
Sbjct: 1038 NSQFLYDISLARNRITILPDNTFSFLN-NLTNLDLSQNPLVT-TNLREVFVHTPRLRKLS 1095
Query: 135 DGAFIGLSSPLQALGLPNNLLSVVPTSA-----LAPLAP--NLDRLDLSHNQLYKLENTS 187
+GL L L LP LLS + S L+PL +L +++SHN+L +
Sbjct: 1096 LH-HMGLYV-LPPLKLP--LLSYLDVSGNYLQELSPLGSLRHLRHVNVSHNKLTNASCAA 1151
Query: 188 FKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDL 247
S+ LDL++N L ++ LA L L L + ++T A LRS+ L
Sbjct: 1152 EHLPPSVRVLDLAHNPLRRITLHDLASLRHLAELNILDVKVTNP--QAFSKLRSLRKLHA 1209
Query: 248 SHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDH 307
S + G + + +P L L+V + N LA K+ L + + + +
Sbjct: 1210 SSHANLGEI-VARIPGLQQLRVHCLEPN-IGQQLFAKLANNTKIRLLELYGSNVQTIAPD 1267
Query: 308 SFRALSTLSHLD--LAHNRIVAVSGA---SLAHLSNLTTLDLSHNFLRALTQDLITPLKS 362
F LS L ++H RI + +L + +L+ +D+SHN + AL D P KS
Sbjct: 1268 VFTGLSRSQRLQVKISHTRISDLPPGIFYALREVPHLS-IDISHNRINALAADSFYPNKS 1326
Score = 135 (52.6 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 83/314 (26%), Positives = 141/314 (44%)
Query: 94 DERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNN 153
D + L+ + VT LP + + LV++ + + AF GL+ L+ L L N
Sbjct: 476 DVHLRALNLEQNFVTQLPEAVFKATGIAHLVLAFNAISRVHPSAFEGLTETLEYLDLERN 535
Query: 154 LLSVVPTSALAPLAPNLDRLDLSHNQLYKLENT-SFKGLSSLNFLDLSYNKLMTLSQDCL 212
L+ VP AL+ L +L L L+ NQ+ +L N SF +L L LS N + L
Sbjct: 536 RLTTVPV-ALSSLH-HLKYLYLTSNQISQLNNLPSFT--ENLRVLSLSGNNFSMIPVLGL 591
Query: 213 APLVTLRVLRLQGNRLT------VSVVAALQGLRSVT--DLDLSHNLLAGPLGPSTVPRL 264
L L + N +T +V + L+++ + ++H L G + +
Sbjct: 592 KNYTQLSYLNMGYNSITDIPEGIFAVDSWGSNLQTILLRNNKITHLHLGSFAGLEQIQEI 651
Query: 265 S-SLKVLSIAHNQ-FSSVRRGALAGLDKLTSLSCHHNQIDVLED-HSFRALSTLSHLDLA 321
S S ++I H F +V R L L+ L+ ++ L+ + LS L L L
Sbjct: 652 SLSFNDITIHHPLVFENVSR-TLKILE-LSFAVFPARSLESLDPLDALLPLSQLIWLGLD 709
Query: 322 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLI-TPLKS-LQELRLDDNDIS-MEPE 378
+N + VS S A + L+ ++LS N L+ L + L + S L E+ L N + +E +
Sbjct: 710 NNNLKQVSNESFAQMRELSYINLSFNQLKTLPRGLFQSDAHSHLVEIDLSYNGLERLEAQ 769
Query: 379 CIY-VG-FNTMDLE 390
+ +G T++L+
Sbjct: 770 TFHSLGDLQTLNLQ 783
Score = 126 (49.4 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 73/317 (23%), Positives = 130/317 (41%)
Query: 97 VSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLS 156
V ++ + +++ + + +G+ L L + EL++IS+ +F ++ L L + N +
Sbjct: 212 VRYIEMSNTHLQSVDDETFQGLRLKTLKLIDNELQDISERSFSTMTHSLMTLDISGNKMQ 271
Query: 157 VVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLV 216
+P AL L +L RL N + L+ +L L LS N + ++
Sbjct: 272 HLPLDALQRLH-SLSRLVAQRNHITTLDGNWDAQHDTLRSLHLSDNDITEVAPGG----G 326
Query: 217 TLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPR---------LSSL 267
++ V+ N S +AA+Q T L+ S+++ P PS+ R L L
Sbjct: 327 SIEVVSQNDNSSQPSSLAAVQ-----TRLETSNSIY--PPSPSSGDRTTGGRPFEQLQKL 379
Query: 268 KVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVA 327
L +++N+ V L L ++ N + V F L L + L N I +
Sbjct: 380 LWLDLSNNRIYHVAGNYLPR--SLVTMDLSSNLLTVFPQQLFEQLPELRIVSLRDNLIRS 437
Query: 328 VSGASLAHLS---NLTTLDLSHNFLRALTQDLITPLKS---LQELRLDDNDISMEPECIY 381
V L +L LDL N + L D S L+ L L+ N ++ PE ++
Sbjct: 438 VQWKELQVRPLRMHLERLDLGQNCIENLESDYFQQNYSDVHLRALNLEQNFVTQLPEAVF 497
Query: 382 VGFNTMDLELIYSGVWR 398
L L ++ + R
Sbjct: 498 KATGIAHLVLAFNAISR 514
Score = 111 (44.1 bits), Expect = 2.9e-15, Sum P(2) = 2.9e-15
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L++L++AHN +S+RR + GL+ L L HNQ+D L+ FSN+
Sbjct: 919 LEFLEILNVAHNNLTSLRRRSFQGLNSLQELDLSHNQLDQLQVEQFSNL 967
Score = 85 (35.0 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 630 SDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
S + K + T L ++L+ L++AHNQ S++ A L+ L L+ HN + L SF
Sbjct: 881 SHNHVTKSDSFTNLANTLRFLNLAHNQLGSLQSHAFGDLEFLEILNVAHNNLTSLRRRSF 940
Query: 690 SNV 692
+
Sbjct: 941 QGL 943
Score = 65 (27.9 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
L L+ L +++N+ ++ GA L L +L HNQ+ L SF
Sbjct: 798 LEFLRYLDLSYNRLVNISHGAFTVLPNLAALDLMHNQLCSLSLKSF 843
Score = 65 (27.9 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 13/48 (27%), Positives = 27/48 (56%)
Query: 645 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
S+L+ + + +N+ + + G+ AGL+++ +S N I + F NV
Sbjct: 622 SNLQTILLRNNKITHLHLGSFAGLEQIQEISLSFNDITIHHPLVFENV 669
Score = 62 (26.9 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSN 691
L+SL+ L ++HNQ ++ + L KL L + N++ L F N
Sbjct: 943 LNSLQELDLSHNQLDQLQVEQFSNLRKLRILRINSNRLRALPREVFMN 990
Score = 54 (24.1 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 21/68 (30%), Positives = 30/68 (44%)
Query: 625 INRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLD-KLTSLSCHHNQIDV 683
I R NS+ R L + + L+ L IA NQ S A + L S+ HN ++
Sbjct: 972 ILRINSN-RLRALPREVFMNTRLEFLDIAENQLSVWPVPAFTDIGFTLRSIQMSHNNLEY 1030
Query: 684 LEDHSFSN 691
L+ F N
Sbjct: 1031 LDASMFIN 1038
Score = 51 (23.0 bits), Expect = 2.3e-18, Sum P(2) = 2.3e-18
Identities = 11/45 (24%), Positives = 22/45 (48%)
Query: 646 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFS 690
+L+ + ++HN + L +S N+I +L D++FS
Sbjct: 1017 TLRSIQMSHNNLEYLDASMFINSQFLYDISLARNRITILPDNTFS 1061
Score = 50 (22.7 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 646 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI-DVLE 685
+L+VLS++ N FS + L +L+ L+ +N I D+ E
Sbjct: 572 NLRVLSLSGNNFSMIPVLGLKNYTQLSYLNMGYNSITDIPE 612
Score = 47 (21.6 bits), Expect = 5.9e-18, Sum P(2) = 5.9e-18
Identities = 14/47 (29%), Positives = 22/47 (46%)
Query: 646 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
S++VL +AHN + LA L L L+ + V +FS +
Sbjct: 1157 SVRVLDLAHNPLRRITLHDLASLRHLAELNIL--DVKVTNPQAFSKL 1201
Score = 47 (21.6 bits), Expect = 5.9e-18, Sum P(2) = 5.9e-18
Identities = 26/104 (25%), Positives = 44/104 (42%)
Query: 600 ICRTPRNSTIHHHACFIP-VAQQEDDINRNNSDSRYVKLQATTI----------LLSSLK 648
+ R P + H C P + QQ NN+ R ++L + + L S +
Sbjct: 1219 VARIPGLQQLRVH-CLEPNIGQQLFAKLANNTKIRLLELYGSNVQTIAPDVFTGLSRSQR 1277
Query: 649 V-LSIAHNQFSSVRRGALAGLDKLTSLSCH--HNQIDVLEDHSF 689
+ + I+H + S + G L ++ LS HN+I+ L SF
Sbjct: 1278 LQVKISHTRISDLPPGIFYALREVPHLSIDISHNRINALAADSF 1321
Score = 45 (20.9 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 10/48 (20%), Positives = 22/48 (45%)
Query: 645 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
S L + +++N + L L +L+ N++ + H+F N+
Sbjct: 751 SHLVEIDLSYNGLERLEAQTFHSLGDLQTLNLQSNRLRTIARHAFHNL 798
Score = 43 (20.2 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 17/57 (29%), Positives = 27/57 (47%)
Query: 630 SDSRYVKLQ--ATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTS---LSCHHNQI 681
S +R V + A T+L +L L + HNQ S+ + + T+ L+ HN I
Sbjct: 807 SYNRLVNISHGAFTVL-PNLAALDLMHNQLCSLSLKSFLYVSNTTTPLRLNVSHNHI 862
Score = 37 (18.1 bits), Expect = 6.5e-17, Sum P(2) = 6.5e-17
Identities = 15/92 (16%), Positives = 40/92 (43%)
Query: 603 TPR--NSTIHHHACFIPVAQQEDDINRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSV 660
TPR ++HH ++ + ++ + Y++ + L L+ ++++HN+ ++
Sbjct: 1088 TPRLRKLSLHHMGLYVLPPLKLPLLSYLDVSGNYLQELSPLGSLRHLRHVNVSHNKLTNA 1147
Query: 661 RRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
A + L HN + + H +++
Sbjct: 1148 SCAAEHLPPSVRVLDLAHNPLRRITLHDLASL 1179
>FB|FBgn0023095 [details] [associations]
symbol:caps "capricious" species:7227 "Drosophila
melanogaster" [GO:0007411 "axon guidance" evidence=IMP] [GO:0007424
"open tracheal system development" evidence=IMP] [GO:0016020
"membrane" evidence=NAS] [GO:0007155 "cell adhesion" evidence=NAS]
[GO:0016477 "cell migration" evidence=TAS] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0007156
"homophilic cell adhesion" evidence=IDA] [GO:0035147 "branch
fusion, open tracheal system" evidence=IMP] [GO:0008045 "motor
neuron axon guidance" evidence=IMP] [GO:0042995 "cell projection"
evidence=IDA] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] [GO:0046331 "lateral inhibition"
evidence=IMP] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
EMBL:AE014296 GO:GO:0016477 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 GO:GO:0008045
GO:GO:0042995 GO:GO:0046331 InterPro:IPR000372 SMART:SM00013
GO:GO:0007476 GO:GO:0035147 ChiTaRS:CAPS CTD:828
FlyBase:FBgn0023095 RefSeq:NP_001036604.2 UniGene:Dm.2067
ProteinModelPortal:Q0E8F0 SMR:Q0E8F0 STRING:Q0E8F0 PRIDE:Q0E8F0
GeneID:39493 KEGG:dme:Dmel_CG11282 UCSC:CG11282-RC GenomeRNAi:39493
NextBio:813926 Bgee:Q0E8F0 Uniprot:Q0E8F0
Length = 748
Score = 255 (94.8 bits), Expect = 3.7e-18, Sum P(2) = 3.7e-18
Identities = 80/279 (28%), Positives = 128/279 (45%)
Query: 90 GLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALG 149
G E D+ +++C + VLP + LVI + +LK I + + L L
Sbjct: 46 GCECDDDTLMVNCGEGTLDVLP--IALNPAIQRLVIKNNKLKTIDSS--MQFYAQLTFLD 101
Query: 150 LPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQ 209
L N + +P + A A L L L HN++ ++ N +F GLS+++ L+L N + L
Sbjct: 102 LSFNDMLTIPERSFAYHA-KLQELHLDHNKIGQVSNKTFLGLSTISVLNLRGNLIAELEY 160
Query: 210 DCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKV 269
+P+V L L L NR++ AL GL ++ L L N L G T L SL
Sbjct: 161 RTFSPMVKLAELNLGQNRISHIDPHALDGLDNLRVLYLDDNTLTTVPGELTFQALHSLAE 220
Query: 270 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 329
L + N F ++ GA L LT L + + + + L +L LDL+ NR+ A+
Sbjct: 221 LYLGTNSFMTIPGGAFQDLKGLTRLDLRGAGLHNISGDALKGLVSLRFLDLSDNRLPAIP 280
Query: 330 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRL 368
A+ L L L++ N ++ + L+ L+ L L
Sbjct: 281 TAAFQRLGRLEQLNIGQNDFEVISSGAFSGLRELRHLEL 319
Score = 219 (82.2 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 68/225 (30%), Positives = 111/225 (49%)
Query: 160 TSALAPLA--PNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVT 217
T + P+A P + RL + +N+L K ++S + + L FLDLS+N ++T+ + A
Sbjct: 62 TLDVLPIALNPAIQRLVIKNNKL-KTIDSSMQFYAQLTFLDLSFNDMLTIPERSFAYHAK 120
Query: 218 LRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQF 277
L+ L L N++ GL +++ L+L NL+A L T + L L++ N+
Sbjct: 121 LQELHLDHNKIGQVSNKTFLGLSTISVLNLRGNLIA-ELEYRTFSPMVKLAELNLGQNRI 179
Query: 278 SSVRRGALAGLDKLTSLSCHHNQIDVLEDH-SFRALSTLSHLDLAHNRIVAVSGASLAHL 336
S + AL GLD L L N + + +F+AL +L+ L L N + + G + L
Sbjct: 180 SHIDPHALDGLDNLRVLYLDDNTLTTVPGELTFQALHSLAELYLGTNSFMTIPGGAFQDL 239
Query: 337 SNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIY 381
LT LDL L ++ D + L SL+ L L DN + P +
Sbjct: 240 KGLTRLDLRGAGLHNISGDALKGLVSLRFLDLSDNRLPAIPTAAF 284
Score = 208 (78.3 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 90/280 (32%), Positives = 131/280 (46%)
Query: 104 LSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSAL 163
+SN T L + + L G +I+ E + S + L+ L L N +S + AL
Sbjct: 134 VSNKTFLGLSTISVLNLRGNLIAELEYRTFSP--MVKLAE----LNLGQNRISHIDPHAL 187
Query: 164 APLAPNLDRLDLSHNQLYKLENT-SFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLR 222
L NL L L N L + +F+ L SL L L N MT+ L L L
Sbjct: 188 DGL-DNLRVLYLDDNTLTTVPGELTFQALHSLAELYLGTNSFMTIPGGAFQDLKGLTRLD 246
Query: 223 LQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTV-PRLSSLKVLSIAHNQFSSVR 281
L+G L AL+GL S+ LDLS N L P P+ RL L+ L+I N F +
Sbjct: 247 LRGAGLHNISGDALKGLVSLRFLDLSDNRL--PAIPTAAFQRLGRLEQLNIGQNDFEVIS 304
Query: 282 RGALAGLDKLTSLSCHHNQ-IDVLEDHSFRALSTLSHLDLAHNR-IVAVSGASLAHLSNL 339
GA +GL +L L Q + +E +F + L HL+L+ N+ + +S +L L +L
Sbjct: 305 SGAFSGLRELRHLELTGAQRLRRVESGAFSGNTNLEHLNLSSNKQLNELSSIALGGLPHL 364
Query: 340 TTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPEC 379
+T+ L N L +L + L+ P LQ L L +N E +C
Sbjct: 365 STVVLKANQLSSLDEGLV-PWADLQTLDLSENPF--ECDC 401
Score = 158 (60.7 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 65/238 (27%), Positives = 103/238 (43%)
Query: 89 RGLEPDERVSLLDCTLSNVTVLPGKFLEGV-TLHGLVISSGELKNI-SDGAFIGLSSPLQ 146
R P +++ L+ + ++ + L+G+ L L + L + + F L S L
Sbjct: 161 RTFSPMVKLAELNLGQNRISHIDPHALDGLDNLRVLYLDDNTLTTVPGELTFQALHS-LA 219
Query: 147 ALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMT 206
L L N +P A L L RLDL L+ + + KGL SL FLDLS N+L
Sbjct: 220 ELYLGTNSFMTIPGGAFQDLK-GLTRLDLRGAGLHNISGDALKGLVSLRFLDLSDNRLPA 278
Query: 207 LSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSS 266
+ L L L + N V A GLR + L+L+ + ++
Sbjct: 279 IPTAAFQRLGRLEQLNIGQNDFEVISSGAFSGLRELRHLELTGAQRLRRVESGAFSGNTN 338
Query: 267 LKVLSIAHN-QFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 323
L+ L+++ N Q + + AL GL L+++ NQ+ L D + L LDL+ N
Sbjct: 339 LEHLNLSSNKQLNELSSIALGGLPHLSTVVLKANQLSSL-DEGLVPWADLQTLDLSEN 395
Score = 59 (25.8 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 13/49 (26%), Positives = 25/49 (51%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L SL+ L ++ N+ ++ A L +L L+ N +V+ +FS +
Sbjct: 263 LVSLRFLDLSDNRLPAIPTAAFQRLGRLEQLNIGQNDFEVISSGAFSGL 311
Score = 55 (24.4 bits), Expect = 3.2e-15, Sum P(2) = 3.2e-15
Identities = 19/63 (30%), Positives = 29/63 (46%)
Query: 630 SDSRYVKLQATTIL-LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQ-IDVLEDH 687
SD+R + L L+ L+I N F + GA +GL +L L Q + +E
Sbjct: 272 SDNRLPAIPTAAFQRLGRLEQLNIGQNDFEVISSGAFSGLRELRHLELTGAQRLRRVESG 331
Query: 688 SFS 690
+FS
Sbjct: 332 AFS 334
Score = 45 (20.9 bits), Expect = 3.7e-18, Sum P(2) = 3.7e-18
Identities = 12/43 (27%), Positives = 26/43 (60%)
Query: 645 SSLKVLSIAHN-QFSSVRRGALAGLDKLTSLSCHHNQIDVLED 686
++L+ L+++ N Q + + AL GL L+++ NQ+ L++
Sbjct: 337 TNLEHLNLSSNKQLNELSSIALGGLPHLSTVVLKANQLSSLDE 379
>UNIPROTKB|E2RGS8 [details] [associations]
symbol:LGR6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 Pfam:PF00001 PRINTS:PR00373 PROSITE:PS51450
GO:GO:0016021 InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0016500
GeneTree:ENSGT00650000092962 CTD:59352 KO:K08399 OMA:AYGKAPS
EMBL:AAEX03004986 EMBL:AAEX03004981 EMBL:AAEX03004982
EMBL:AAEX03004983 EMBL:AAEX03004984 EMBL:AAEX03004985
RefSeq:XP_848875.1 Ensembl:ENSCAFT00000016729 GeneID:490231
KEGG:cfa:490231 NextBio:20863298 Uniprot:E2RGS8
Length = 965
Score = 241 (89.9 bits), Expect = 5.0e-18, Sum P(2) = 5.0e-18
Identities = 91/283 (32%), Positives = 131/283 (46%)
Query: 64 CACDLPHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVL-PGKFLEGVTLHG 122
C C + +A+ S+L +S R L+P + LD +++N+T L PG F L
Sbjct: 37 CRCQ-EDGIMLSADCSEL-GLSAVPRDLDP--LTAYLDLSMNNLTELQPGLFHHLRFLEE 92
Query: 123 LVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYK 182
L +S L +I AF GL S L+ L L NN L VP AL L P+L L L N +
Sbjct: 93 LRLSGNHLSHIPGHAFSGLYS-LKILMLQNNQLGGVPADALWEL-PSLQSLRLDANLISL 150
Query: 183 LENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSV 242
+ SF+GLSSL L L N L + L L L+ + L NR++ A Q L S+
Sbjct: 151 VPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNRISHIPDYAFQNLTSL 210
Query: 243 TDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID 302
L L HN LG + L +L+ L + +N+ A+ L +L L H+N I
Sbjct: 211 VVLHL-HNNRIQHLGTHSFEGLHNLETLDLNYNELQEFPV-AIRTLGRLQELGFHNNNIK 268
Query: 303 VLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLS 345
+ + +F L + N I V ++ L L TL L+
Sbjct: 269 AIPEKAFMGNPLLQTIHFYDNPIQCVGRSAFQDLPKLHTLSLN 311
Score = 226 (84.6 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 88/250 (35%), Positives = 125/250 (50%)
Query: 135 DGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSL 194
DG I LS+ LGL S VP L PL LD LS N L +L+ F L L
Sbjct: 42 DG--IMLSADCSELGL-----SAVPRD-LDPLTAYLD---LSMNNLTELQPGLFHHLRFL 90
Query: 195 NFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAG 254
L LS N L + + L +L++L LQ N+L AL L S+ L L NL++
Sbjct: 91 EELRLSGNHLSHIPGHAFSGLYSLKILMLQNNQLGGVPADALWELPSLQSLRLDANLIS- 149
Query: 255 PLGPS-TVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALS 313
L P + LSSL+ L + N + + AL L L +++ N+I + D++F+ L+
Sbjct: 150 -LVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNRISHIPDYAFQNLT 208
Query: 314 TLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 373
+L L L +NRI + S L NL TLDL++N L+ + T L LQEL +N+I
Sbjct: 209 SLVVLHLHNNRIQHLGTHSFEGLHNLETLDLNYNELQEFPVAIRT-LGRLQELGFHNNNI 267
Query: 374 SMEPECIYVG 383
PE ++G
Sbjct: 268 KAIPEKAFMG 277
Score = 226 (84.6 bits), Expect = 3.4e-14, Sum P(2) = 3.4e-14
Identities = 89/317 (28%), Positives = 140/317 (44%)
Query: 67 DLP--HTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGV-TLHGL 123
+LP +LR AN L S GL + L D L T +P + L + L +
Sbjct: 134 ELPSLQSLRLDANLISLVP-ERSFEGLSSLRHLWLDDNAL---TEIPVRALNNLPALQAM 189
Query: 124 VISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKL 183
++ + +I D AF L+S L L L NN + + T + L NL+ LDL++N+L +
Sbjct: 190 TLALNRISHIPDYAFQNLTS-LVVLHLHNNRIQHLGTHSFEGLH-NLETLDLNYNELQEF 247
Query: 184 ENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVT 243
+ + L L L N + + + L+ + N + +A Q L +
Sbjct: 248 P-VAIRTLGRLQELGFHNNNIKAIPEKAFMGNPLLQTIHFYDNPIQCVGRSAFQDLPKLH 306
Query: 244 DLDLSHNLLAGPLGPSTVPRL---SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQ 300
L L+ G P L +SL++L++ + G L +L L HNQ
Sbjct: 307 TLSLN-----GATDIQEFPDLKGTTSLEILTLTRAGIRLLPPGMCQQLPRLRVLELSHNQ 361
Query: 301 IDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPL 360
I+ L S L + L HNRI A+ + + LS+L LDLS N +R++ + L
Sbjct: 362 IEELP--SLHRCQKLEEIGLQHNRIGAIGADTFSQLSSLRALDLSWNAIRSIHPEAFVTL 419
Query: 361 KSLQELRLDDNDISMEP 377
+SL +L L DN +S P
Sbjct: 420 RSLVKLDLTDNQLSTLP 436
Score = 207 (77.9 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 73/232 (31%), Positives = 107/232 (46%)
Query: 144 PLQA-LGLP-NNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSY 201
PL A L L NNL + P L L+ L LS N L + +F GL SL L L
Sbjct: 64 PLTAYLDLSMNNLTELQP--GLFHHLRFLEELRLSGNHLSHIPGHAFSGLYSLKILMLQN 121
Query: 202 NKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTV 261
N+L + D L L +L+ LRL N +++ + +GL S+ L L N L + +
Sbjct: 122 NQLGGVPADALWELPSLQSLRLDANLISLVPERSFEGLSSLRHLWLDDNALT-EIPVRAL 180
Query: 262 PRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 321
L +L+ +++A N+ S + A L L L H+N+I L HSF L L LDL
Sbjct: 181 NNLPALQAMTLALNRISHIPDYAFQNLTSLVVLHLHNNRIQHLGTHSFEGLHNLETLDLN 240
Query: 322 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 373
+N + A + L L L +N ++A+ + LQ + DN I
Sbjct: 241 YNELQEFPVA-IRTLGRLQELGFHNNNIKAIPEKAFMGNPLLQTIHFYDNPI 291
Score = 147 (56.8 bits), Expect = 8.0e-08, Sum P(2) = 8.0e-08
Identities = 61/198 (30%), Positives = 89/198 (44%)
Query: 198 DLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLG 257
D S L + +D L PL L L N LT LR + +L LS N L+ G
Sbjct: 49 DCSELGLSAVPRD-LDPLTAY--LDLSMNNLTELQPGLFHHLRFLEELRLSGNHLSHIPG 105
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 317
+ L SLK+L + +NQ V AL L L SL N I ++ + SF LS+L H
Sbjct: 106 HA-FSGLYSLKILMLQNNQLGGVPADALWELPSLQSLRLDANLISLVPERSFEGLSSLRH 164
Query: 318 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEP 377
L L N + + +L +L L + L+ N + + L SL L L +N I
Sbjct: 165 LWLDDNALTEIPVRALNNLPALQAMTLALNRISHIPDYAFQNLTSLVVLHLHNNRIQHLG 224
Query: 378 ECIYVGFNTMD-LELIYS 394
+ G + ++ L+L Y+
Sbjct: 225 THSFEGLHNLETLDLNYN 242
Score = 137 (53.3 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 59/222 (26%), Positives = 96/222 (43%)
Query: 145 LQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKL 204
LQ LG NN + +P A P L + N + + ++F+ L L+ L L+
Sbjct: 257 LQELGFHNNNIKAIPEKAFMG-NPLLQTIHFYDNPIQCVGRSAFQDLPKLHTLSLNGATD 315
Query: 205 MTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRL 264
+ D L +L +L L + + Q L + L+LSHN + L PS + R
Sbjct: 316 IQEFPD-LKGTTSLEILTLTRAGIRLLPPGMCQQLPRLRVLELSHNQIE-EL-PS-LHRC 371
Query: 265 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 324
L+ + + HN+ ++ + L L +L N I + +F L +L LDL N+
Sbjct: 372 QKLEEIGLQHNRIGAIGADTFSQLSSLRALDLSWNAIRSIHPEAFVTLRSLVKLDLTDNQ 431
Query: 325 IVAVSGASLAHLSNLTTLDLSHNFL--RALTQDLITPLKSLQ 364
+ S LA L L L L N +A ++D L+ L+
Sbjct: 432 L---STLPLAGLGGLMHLKLRGNLALSQAFSKDSFPKLRILE 470
Score = 62 (26.9 bits), Expect = 5.0e-18, Sum P(2) = 5.0e-18
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L+VL ++HNQ + +L KL + HN+I + +FS +
Sbjct: 349 LPRLRVLELSHNQIEELP--SLHRCQKLEEIGLQHNRIGAIGADTFSQL 395
Score = 55 (24.4 bits), Expect = 2.7e-17, Sum P(2) = 2.7e-17
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL 684
LSSL+ L ++ N S+ A L L L NQ+ L
Sbjct: 395 LSSLRALDLSWNAIRSIHPEAFVTLRSLVKLDLTDNQLSTL 435
Score = 48 (22.0 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 12/46 (26%), Positives = 23/46 (50%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
L +L+ L + +N+ A+ L +L L H+N I + + +F
Sbjct: 231 LHNLETLDLNYNELQEFPV-AIRTLGRLQELGFHNNNIKAIPEKAF 275
Score = 46 (21.3 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 645 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL 684
+SL++L++ + G L +L L HNQI+ L
Sbjct: 326 TSLEILTLTRAGIRLLPPGMCQQLPRLRVLELSHNQIEEL 365
Score = 41 (19.5 bits), Expect = 7.7e-16, Sum P(2) = 7.7e-16
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 642 ILLSSLKVLSIAHNQFSSVRRGALAGL 668
+ L SL L + NQ S++ L GL
Sbjct: 417 VTLRSLVKLDLTDNQLSTLPLAGLGGL 443
Score = 41 (19.5 bits), Expect = 7.7e-16, Sum P(2) = 7.7e-16
Identities = 9/43 (20%), Positives = 19/43 (44%)
Query: 647 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
L+ + + HN+ ++ + L L +L N I + +F
Sbjct: 374 LEEIGLQHNRIGAIGADTFSQLSSLRALDLSWNAIRSIHPEAF 416
Score = 40 (19.1 bits), Expect = 9.8e-16, Sum P(2) = 9.8e-16
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 663 GALAGLDKLTSLSC 676
GA+AG + ++ LSC
Sbjct: 600 GAIAGANAVSGLSC 613
>UNIPROTKB|Q65Z91 [details] [associations]
symbol:TSKU "Tsukushin" species:9031 "Gallus gallus"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0021540
"corpus callosum morphogenesis" evidence=IEA] [GO:0021670 "lateral
ventricle development" evidence=IEA] [GO:0021960 "anterior
commissure morphogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0007275 GO:GO:0005576
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372
SMART:SM00013 EMBL:AB100033 EMBL:AB195969 IPI:IPI00682643
IPI:IPI00775744 RefSeq:NP_001005346.1 UniGene:Gga.43824
ProteinModelPortal:Q65Z91 STRING:Q65Z91 GeneID:419088
KEGG:gga:419088 CTD:25987 HOGENOM:HOG000001578 HOVERGEN:HBG054643
InParanoid:Q65Z91 KO:K08130 OrthoDB:EOG4V171F NextBio:20822199
Uniprot:Q65Z91
Length = 369
Score = 242 (90.2 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 93/293 (31%), Positives = 144/293 (49%)
Query: 99 LLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGA---FIGLSSPLQA--LGLPNN 153
LL C + T PG E V GL S K G + + PL L L +N
Sbjct: 12 LLPCFSTTKTCFPGCHCE-VESFGLFDSFSLTKVDCSGIGSHIVPVPIPLDTSYLDLSSN 70
Query: 154 LLSVVPTSALA-PLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCL 212
L + S L P L LDLS+N + K+ +T+F L L LDLS+N L L +DC
Sbjct: 71 KLETINESMLTGPGYTTLVSLDLSYNNIAKISSTTFSRLRYLESLDLSHNSLEVLPEDCF 130
Query: 213 APLVTLRVLRLQGNRLT-VSV-VAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVL 270
+ L + L N+L +++ V A +G ++DLS+N+L+ + + + +++ L
Sbjct: 131 SSS-PLGDIDLSNNKLLDIALDVFASKGQGKPLNVDLSNNMLS-KITRNHEKSIPNIQNL 188
Query: 271 SIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA--HNRIVAV 328
+++ N+ +SV L G+ L L+ N + +E F+ L L HL L+ H+ +
Sbjct: 189 NLSGNRLTSVPN--LQGIP-LRYLNLDGNPLAKIEKGDFKGLKGLIHLSLSGLHD-FREL 244
Query: 329 SGASLAHLSNLTTLDLSHN-FLRALTQDLITPLKSLQELRLDDNDISMEPECI 380
S S L L LDLS+N LR+LT ++I L S+QEL L +S P+ +
Sbjct: 245 SPYSFKELPALQVLDLSNNPNLRSLTAEVIFGLNSIQELNLSGTGVSSLPKTV 297
Score = 126 (49.4 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 40/150 (26%), Positives = 74/150 (49%)
Query: 245 LDLSHNLLAGPLGPS--TVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID 302
LDLS N L + S T P ++L L +++N + + + L L SL HN ++
Sbjct: 65 LDLSSNKLE-TINESMLTGPGYTTLVSLDLSYNNIAKISSTTFSRLRYLESLDLSHNSLE 123
Query: 303 VLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTL--DLSHNFLRALTQDLITPL 360
VL + F + S L +DL++N+++ ++ A L DLS+N L +T++ +
Sbjct: 124 VLPEDCFSS-SPLGDIDLSNNKLLDIALDVFASKGQGKPLNVDLSNNMLSKITRNHEKSI 182
Query: 361 KSLQELRLDDNDISMEPECIYVGFNTMDLE 390
++Q L L N ++ P + ++L+
Sbjct: 183 PNIQNLNLSGNRLTSVPNLQGIPLRYLNLD 212
Score = 123 (48.4 bits), Expect = 0.00019, P = 0.00019
Identities = 54/203 (26%), Positives = 96/203 (47%)
Query: 100 LDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFI--GLSSPLQALGLPNNLLSV 157
LD + +++ VLP L + +S+ +L +I+ F G PL + L NN+LS
Sbjct: 115 LDLSHNSLEVLPEDCFSSSPLGDIDLSNNKLLDIALDVFASKGQGKPLN-VDLSNNMLSK 173
Query: 158 VPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVT 217
+ + + PN+ L+LS N+L + N +G+ L +L+L N L + + L
Sbjct: 174 ITRNHEKSI-PNIQNLNLSGNRLTSVPN--LQGIP-LRYLNLDGNPLAKIEKGDFKGLKG 229
Query: 218 LRVLRLQG-NRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQ 276
L L L G + + + L ++ LDLS+N L + L+S++ L+++
Sbjct: 230 LIHLSLSGLHDFRELSPYSFKELPALQVLDLSNNPNLRSLTAEVIFGLNSIQELNLSGTG 289
Query: 277 FSSVRRGALAGLDKLTSLSCHHN 299
SS+ + L L L S++ N
Sbjct: 290 VSSLPKTVLKYLPSLKSITLRKN 312
>FB|FBgn0003255 [details] [associations]
symbol:rk "rickets" species:7227 "Drosophila melanogaster"
[GO:0004930 "G-protein coupled receptor activity" evidence=ISS;NAS]
[GO:0016021 "integral to membrane" evidence=IEA;ISS] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IEA;ISS]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=NAS] [GO:0008188
"neuropeptide receptor activity" evidence=ISS] [GO:0007564
"regulation of chitin-based cuticle tanning" evidence=IMP]
[GO:0001837 "epithelial to mesenchymal transition" evidence=IMP]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 EMBL:AE014134
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0001837
InterPro:IPR025875 Pfam:PF12799 GO:GO:0016500 GO:GO:0008188
GeneTree:ENSGT00650000092962 KO:K08399 RefSeq:NP_476702.1
UniGene:Dm.6481 ProteinModelPortal:Q7KTA0 SMR:Q7KTA0 STRING:Q7KTA0
PRIDE:Q7KTA0 EnsemblMetazoa:FBtr0080610 GeneID:34819
KEGG:dme:Dmel_CG8930 UCSC:CG8930-RA CTD:34819 FlyBase:FBgn0003255
InParanoid:Q7KTA0 OMA:WLITRKT OrthoDB:EOG4FN2ZQ PhylomeDB:Q7KTA0
GenomeRNAi:34819 NextBio:790377 ArrayExpress:Q7KTA0 Bgee:Q7KTA0
GO:GO:0007564 Uniprot:Q7KTA0
Length = 1360
Score = 245 (91.3 bits), Expect = 6.0e-18, Sum P(2) = 6.0e-18
Identities = 82/271 (30%), Positives = 124/271 (45%)
Query: 100 LDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVP 159
L C + +P V + L + + L + +F ++ L+ L L +N + +
Sbjct: 163 LSCRGIGILAVPVNLPNEVVV--LDLGNNNLTKLEANSFF-MAPNLEELTLSDNSIINMD 219
Query: 160 TSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLR 219
+A LA L RL L + L L SF+GL+ L L L+ N L++L DCL L LR
Sbjct: 220 PNAFYGLA-KLKRLSLQNCGLKSLPPQSFQGLAQLTSLQLNGNALVSLDGDCLGHLQKLR 278
Query: 220 VLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSS 279
LRL+GN AL GLR++ L+L NLL + PR+ +L VL + NQ
Sbjct: 279 TLRLEGNLFYRIPTNALAGLRTLEALNLGSNLLT-IINDEDFPRMPNLIVLLLKRNQIMK 337
Query: 280 VRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNL 339
+ GAL L L L N I L + LS L L + NR+ ++ L ++
Sbjct: 338 ISAGALKNLTALKVLELDDNLISSLPE-GLSKLSQLQELSITSNRLRWINDTELPR--SM 394
Query: 340 TTLDLSHNFLRALTQDLITPLKSLQELRLDD 370
LD+ N L ++ + L++L L D
Sbjct: 395 QMLDMRANPLSTISPGAFRGMSKLRKLILSD 425
Score = 167 (63.8 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 79/286 (27%), Positives = 127/286 (44%)
Query: 110 LPGKFLEGV-TLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAP 168
+P L G+ TL L + S L I+D F + + L L L N + + AL L
Sbjct: 290 IPTNALAGLRTLEALNLGSNLLTIINDEDFPRMPN-LIVLLLKRNQIMKISAGALKNLTA 348
Query: 169 NLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRL 228
L L+L N + L K LS L L ++ N+L ++ D P ++++L ++ N L
Sbjct: 349 -LKVLELDDNLISSLPEGLSK-LSQLQELSITSNRLRWIN-DTELPR-SMQMLDMRANPL 404
Query: 229 TVSVVAALQGLRSVTDLDLS--HNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALA 286
+ A +G+ + L LS L + P + +L++L + V
Sbjct: 405 STISPGAFRGMSKLRKLILSDVRTLRSFP----ELEACHALEILKLDRAGIQEVPANLCR 460
Query: 287 GLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSH 346
+L SL N + + + S + L LDL+ N+I + G L L L LS+
Sbjct: 461 QTPRLKSLELKTNSLKRIPNLS--SCRDLRLLDLSSNQIEKIQGKPFNGLKQLNDLLLSY 518
Query: 347 NFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTM-DLEL 391
N ++AL QD + LQ L L+ N+IS + + GF + DL L
Sbjct: 519 NRIKALPQDAFQGIPKLQLLDLEGNEISYIHKEAFSGFTALEDLNL 564
Score = 163 (62.4 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 63/209 (30%), Positives = 100/209 (47%)
Query: 67 DLPHTLRCTANKSD-LYAISE-SLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLV 124
+LP +++ +++ L IS + RG+ L LS+V L F E H L
Sbjct: 389 ELPRSMQMLDMRANPLSTISPGAFRGMS-----KLRKLILSDVRTLRS-FPELEACHALE 442
Query: 125 ISSGELKNISD-GAFIGLSSP-LQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYK 182
I + I + A + +P L++L L N L +P + +L LDLS NQ+ K
Sbjct: 443 ILKLDRAGIQEVPANLCRQTPRLKSLELKTNSLKRIPNLSSCR---DLRLLDLSSNQIEK 499
Query: 183 LENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSV 242
++ F GL LN L LSYN++ L QD + L++L L+GN ++ A G ++
Sbjct: 500 IQGKPFNGLKQLNDLLLSYNRIKALPQDAFQGIPKLQLLDLEGNEISYIHKEAFSGFTAL 559
Query: 243 TDLDLSHNLLAGPLGPSTVPRLSSLKVLS 271
DL+L +N+ L S + L LK +
Sbjct: 560 EDLNLGNNIFP-ELPESGLRALLHLKTFN 587
Score = 145 (56.1 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 77/290 (26%), Positives = 128/290 (44%)
Query: 125 ISSGELKNIS-------DGAFI-----GLS--SPLQALGLPNNLLSVVPTSALAPLAPNL 170
IS+G LKN++ D I GLS S LQ L + +N L + + L P + +
Sbjct: 338 ISAGALKNLTALKVLELDDNLISSLPEGLSKLSQLQELSITSNRLRWINDTEL-PRS--M 394
Query: 171 DRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTV 230
LD+ N L + +F+G+S L L LS + + + L L +L+L +R +
Sbjct: 395 QMLDMRANPLSTISPGAFRGMSKLRKLILSDVRTLRSFPE-LEACHALEILKL--DRAGI 451
Query: 231 SVVAA--LQGLRSVTDLDLSHNLLAGPLGPSTVPRLSS---LKVLSIAHNQFSSVRRGAL 285
V A + + L+L N L +P LSS L++L ++ NQ ++
Sbjct: 452 QEVPANLCRQTPRLKSLELKTNSL------KRIPNLSSCRDLRLLDLSSNQIEKIQGKPF 505
Query: 286 AGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLS 345
GL +L L +N+I L +F+ + L LDL N I + + + + L L+L
Sbjct: 506 NGLKQLNDLLLSYNRIKALPQDAFQGIPKLQLLDLEGNEISYIHKEAFSGFTALEDLNLG 565
Query: 346 HNFLRALTQDLITPLKSLQELRLDDNDISME--PECIYVGFNTMDLELIY 393
+N L + + L++L L+ +N E P + T+ L Y
Sbjct: 566 NNIFPELPE---SGLRALLHLKTFNNPKLREFPPPDTFPRIQTLILSYAY 612
Score = 144 (55.7 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 47/156 (30%), Positives = 75/156 (48%)
Query: 217 TLRVLRLQGNRLTVSVVAALQGL-RSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHN 275
+L VLRL + ++A L V LDL +N L L ++ +L+ L+++ N
Sbjct: 157 SLEVLRLSCRG--IGILAVPVNLPNEVVVLDLGNNNLT-KLEANSFFMAPNLEELTLSDN 213
Query: 276 QFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAH 335
++ A GL KL LS + + L SF+ L+ L+ L L N +V++ G L H
Sbjct: 214 SIINMDPNAFYGLAKLKRLSLQNCGLKSLPPQSFQGLAQLTSLQLNGNALVSLDGDCLGH 273
Query: 336 LSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
L L TL L N + + + L++L+ L L N
Sbjct: 274 LQKLRTLRLEGNLFYRIPTNALAGLRTLEALNLGSN 309
Score = 142 (55.0 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 58/220 (26%), Positives = 89/220 (40%)
Query: 197 LDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPL 256
LDL N L L + L L L N + A GL + L L + L L
Sbjct: 184 LDLGNNNLTKLEANSFFMAPNLEELTLSDNSIINMDPNAFYGLAKLKRLSLQNCGLKS-L 242
Query: 257 GPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLS 316
P + L+ L L + N S+ L L KL +L N + ++ L TL
Sbjct: 243 PPQSFQGLAQLTSLQLNGNALVSLDGDCLGHLQKLRTLRLEGNLFYRIPTNALAGLRTLE 302
Query: 317 HLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISME 376
L+L N + ++ + NL L L N + ++ + L +L+ L LDDN IS
Sbjct: 303 ALNLGSNLLTIINDEDFPRMPNLIVLLLKRNQIMKISAGALKNLTALKVLELDDNLISSL 362
Query: 377 PECIYVGFNTMDLELIYSGV-WRHSTLLIPVMLSLCTRSS 415
PE + +L + + + W + T L M L R++
Sbjct: 363 PEGLSKLSQLQELSITSNRLRWINDTELPRSMQMLDMRAN 402
Score = 61 (26.5 bits), Expect = 6.0e-18, Sum P(2) = 6.0e-18
Identities = 24/97 (24%), Positives = 43/97 (44%)
Query: 600 ICR-TPRNSTIH---HHACFIPVAQQEDDINRNNSDSRYV-KLQATTIL-LSSLKVLSIA 653
+CR TPR ++ + IP D+ + S + K+Q L L L ++
Sbjct: 458 LCRQTPRLKSLELKTNSLKRIPNLSSCRDLRLLDLSSNQIEKIQGKPFNGLKQLNDLLLS 517
Query: 654 HNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFS 690
+N+ ++ + A G+ KL L N+I + +FS
Sbjct: 518 YNRIKALPQDAFQGIPKLQLLDLEGNEISYIHKEAFS 554
Score = 59 (25.8 bits), Expect = 9.7e-18, Sum P(2) = 9.7e-18
Identities = 12/46 (26%), Positives = 23/46 (50%)
Query: 647 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L++L ++ NQ ++ GL +L L +N+I L +F +
Sbjct: 487 LRLLDLSSNQIEKIQGKPFNGLKQLNDLLLSYNRIKALPQDAFQGI 532
Score = 59 (25.8 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 18/56 (32%), Positives = 32/56 (57%)
Query: 632 SRYVKLQATTIL-LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLED 686
++ +K+ A + L++LKVL + N SS+ G L+ L +L LS N++ + D
Sbjct: 333 NQIMKISAGALKNLTALKVLELDDNLISSLPEG-LSKLSQLQELSITSNRLRWIND 387
Score = 49 (22.3 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLED 686
+ +L VL + NQ + GAL L L L N I L +
Sbjct: 322 MPNLIVLLLKRNQIMKISAGALKNLTALKVLELDDNLISSLPE 364
>UNIPROTKB|F1NDH7 [details] [associations]
symbol:TSKU "Tsukushin" species:9031 "Gallus gallus"
[GO:0021540 "corpus callosum morphogenesis" evidence=IEA]
[GO:0021670 "lateral ventricle development" evidence=IEA]
[GO:0021960 "anterior commissure morphogenesis" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 SMART:SM00013 IPI:IPI00682643
OMA:LTRVDCS GeneTree:ENSGT00390000016740 EMBL:AADN02059345
ProteinModelPortal:F1NDH7 Ensembl:ENSGALT00000001106 Uniprot:F1NDH7
Length = 371
Score = 242 (90.2 bits), Expect = 6.1e-18, P = 6.1e-18
Identities = 93/293 (31%), Positives = 144/293 (49%)
Query: 99 LLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGA---FIGLSSPLQA--LGLPNN 153
LL C + T PG E V GL S K G + + PL L L +N
Sbjct: 12 LLPCFSTTKTCFPGCHCE-VESFGLFDSFSLTKVDCSGIGSHIVPVPIPLDTSYLDLSSN 70
Query: 154 LLSVVPTSALA-PLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCL 212
L + S L P L LDLS+N + K+ +T+F L L LDLS+N L L +DC
Sbjct: 71 KLETINESMLTGPGYTTLVSLDLSYNNIAKISSTTFSRLRYLESLDLSHNSLEVLPEDCF 130
Query: 213 APLVTLRVLRLQGNRLT-VSV-VAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVL 270
+ L + L N+L +++ V A +G ++DLS+N+L+ + + + +++ L
Sbjct: 131 SSS-PLGDIDLSNNKLLDIALDVFASKGQGKPLNVDLSNNMLS-KITRNHEKSIPNIQNL 188
Query: 271 SIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA--HNRIVAV 328
+++ N+ +SV L G+ L L+ N + +E F+ L L HL L+ H+ +
Sbjct: 189 NLSGNRLTSVPN--LQGIP-LRYLNLDGNPLAKIEKGDFKGLKGLIHLSLSGLHD-FREL 244
Query: 329 SGASLAHLSNLTTLDLSHN-FLRALTQDLITPLKSLQELRLDDNDISMEPECI 380
S S L L LDLS+N LR+LT ++I L S+QEL L +S P+ +
Sbjct: 245 SPYSFKELPALQVLDLSNNPNLRSLTAEVIFGLNSIQELNLSGTGVSSLPKTV 297
Score = 126 (49.4 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 40/150 (26%), Positives = 74/150 (49%)
Query: 245 LDLSHNLLAGPLGPS--TVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID 302
LDLS N L + S T P ++L L +++N + + + L L SL HN ++
Sbjct: 65 LDLSSNKLE-TINESMLTGPGYTTLVSLDLSYNNIAKISSTTFSRLRYLESLDLSHNSLE 123
Query: 303 VLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTL--DLSHNFLRALTQDLITPL 360
VL + F + S L +DL++N+++ ++ A L DLS+N L +T++ +
Sbjct: 124 VLPEDCFSS-SPLGDIDLSNNKLLDIALDVFASKGQGKPLNVDLSNNMLSKITRNHEKSI 182
Query: 361 KSLQELRLDDNDISMEPECIYVGFNTMDLE 390
++Q L L N ++ P + ++L+
Sbjct: 183 PNIQNLNLSGNRLTSVPNLQGIPLRYLNLD 212
Score = 123 (48.4 bits), Expect = 0.00019, P = 0.00019
Identities = 54/203 (26%), Positives = 96/203 (47%)
Query: 100 LDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFI--GLSSPLQALGLPNNLLSV 157
LD + +++ VLP L + +S+ +L +I+ F G PL + L NN+LS
Sbjct: 115 LDLSHNSLEVLPEDCFSSSPLGDIDLSNNKLLDIALDVFASKGQGKPLN-VDLSNNMLSK 173
Query: 158 VPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVT 217
+ + + PN+ L+LS N+L + N +G+ L +L+L N L + + L
Sbjct: 174 ITRNHEKSI-PNIQNLNLSGNRLTSVPN--LQGIP-LRYLNLDGNPLAKIEKGDFKGLKG 229
Query: 218 LRVLRLQG-NRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQ 276
L L L G + + + L ++ LDLS+N L + L+S++ L+++
Sbjct: 230 LIHLSLSGLHDFRELSPYSFKELPALQVLDLSNNPNLRSLTAEVIFGLNSIQELNLSGTG 289
Query: 277 FSSVRRGALAGLDKLTSLSCHHN 299
SS+ + L L L S++ N
Sbjct: 290 VSSLPKTVLKYLPSLKSITLRKN 312
>UNIPROTKB|C9JEE2 [details] [associations]
symbol:LRRTM1 "Leucine-rich repeat transmembrane neuronal
protein 1" species:9606 "Homo sapiens" [GO:0007610 "behavior"
evidence=IEA] [GO:0035418 "protein localization to synapse"
evidence=IEA] [GO:0050808 "synapse organization" evidence=IEA]
[GO:0060076 "excitatory synapse" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0007610 InterPro:IPR003591 SMART:SM00369
GO:GO:0050808 InterPro:IPR000372 SMART:SM00013 GO:GO:0035418
EMBL:AC016670 HGNC:HGNC:19408 IPI:IPI00916020
ProteinModelPortal:C9JEE2 SMR:C9JEE2 STRING:C9JEE2
Ensembl:ENST00000416268 ArrayExpress:C9JEE2 Bgee:C9JEE2
Uniprot:C9JEE2
Length = 223
Score = 183 (69.5 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 60/177 (33%), Positives = 83/177 (46%)
Query: 99 LLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVV 158
LL C N+T P L G L GL + L + G F GL L L L +N + V
Sbjct: 49 LLYCEALNLTEAPHN-LSG--LLGLSLRYNSLSELRAGQFTGLMQ-LTWLYLDHNHICSV 104
Query: 159 PTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTL 218
A L + L LS NQ+ +L NT+F+ + +L +DLSYNKL L+ D L L
Sbjct: 105 QGDAFQKLR-RVKELTLSSNQITQLPNTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKL 163
Query: 219 RVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHN 275
L ++ N + V Q RS+ LD+ +N L L ++ L L L + HN
Sbjct: 164 TTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKS-LARNSFAGLFKLTELHLEHN 219
Score = 165 (63.1 bits), Expect = 7.3e-18, Sum P(2) = 7.3e-18
Identities = 41/118 (34%), Positives = 62/118 (52%)
Query: 264 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 323
LS L LS+ +N S +R G GL +LT L HN I ++ +F+ L + L L+ N
Sbjct: 64 LSGLLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSN 123
Query: 324 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIY 381
+I + + + NL ++DLS+N L+AL DL L+ L L + N I P I+
Sbjct: 124 QITQLPNTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIF 181
Score = 144 (55.7 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 47/156 (30%), Positives = 70/156 (44%)
Query: 173 LDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSV 232
L L +N L +L F GL L +L L +N + ++ D L ++ L L N++T
Sbjct: 70 LSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLP 129
Query: 233 VAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHN--QFSSVRRGALAGLDK 290
+ + ++ +DLS+N L L P L L L + N QF VR
Sbjct: 130 NTTFRPMPNLRSVDLSYNKLQA-LAPDLFHGLRKLTTLHMRANAIQFVPVR--IFQDCRS 186
Query: 291 LTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 326
L L +NQ+ L +SF L L+ L L HN +V
Sbjct: 187 LKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLV 222
Score = 136 (52.9 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 48/177 (27%), Positives = 80/177 (45%)
Query: 199 LSYNKLMTLSQDCLAP--LVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPL 256
L Y + + L++ AP L L L L+ N L+ GL +T L L HN +
Sbjct: 49 LLYCEALNLTE---APHNLSGLLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQ 105
Query: 257 GPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLS 316
G + +L +K L+++ NQ + + + L S+ +N++ L F L L+
Sbjct: 106 GDA-FQKLRRVKELTLSSNQITQLPNTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLT 164
Query: 317 HLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 373
L + N I V +L LD+ +N L++L ++ L L EL L+ ND+
Sbjct: 165 TLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDL 221
Score = 86 (35.3 bits), Expect = 7.3e-18, Sum P(2) = 7.3e-18
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 646 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
SLK L I +NQ S+ R + AGL KLT L HN +
Sbjct: 186 SLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDL 221
>RGD|1307755 [details] [associations]
symbol:Nepn "nephrocan" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0005614 "interstitial
matrix" evidence=ISO] [GO:0005615 "extracellular space"
evidence=ISO] [GO:0030198 "extracellular matrix organization"
evidence=ISO] [GO:0030512 "negative regulation of transforming
growth factor beta receptor signaling pathway" evidence=ISO]
[GO:0031012 "extracellular matrix" evidence=ISO] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 RGD:1307755 IPI:IPI00564207
Ensembl:ENSRNOT00000048578 UCSC:RGD:1307755 ArrayExpress:F1LVY4
Uniprot:F1LVY4
Length = 262
Score = 226 (84.6 bits), Expect = 7.7e-18, P = 7.7e-18
Identities = 76/227 (33%), Positives = 120/227 (52%)
Query: 123 LVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYK 182
++++SG ++I + F L++ L+ L L N L VP++ L NL+ L L+ N +
Sbjct: 39 ILLASGT-ESIENDTFKTLTT-LKTLELWKNKLRRVPSA----LPANLEVLKLNDNSICA 92
Query: 183 LENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSV 242
L + F+GLS+L L+L N + +LS L+ LV+L+ L + GN + SV L L ++
Sbjct: 93 LHGSDFEGLSNLKVLELKNNLISSLSPSMLSSLVSLQSLLVDGNNIE-SVTGPLS-LPNL 150
Query: 243 TDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDK-LTSLSCHHNQI 301
+ + N L G + L +L+ LS + N + + L K L SL NQ+
Sbjct: 151 KYMSMEKNKLHLISG-NVFTSLQNLQFLSFSGNFLTKIP----INLPKSLLSLKMERNQL 205
Query: 302 DVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNF 348
V+ R L LSHL L+ N + ++ GA L L+NLTTL+ S NF
Sbjct: 206 KVVRFRDMRHLENLSHLYLSENLLSSIDGAQL--LTNLTTLEASQNF 250
Score = 165 (63.1 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 61/204 (29%), Positives = 98/204 (48%)
Query: 172 RLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVS 231
RL +SH+++ L+ ++ L +L L + ++ D L TL+ L L N+L
Sbjct: 13 RLYISHSRIQHLQLSNLTQLLALEDFILLASGTESIENDTFKTLTTLKTLELWKNKLR-R 71
Query: 232 VVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKL 291
V +AL V L L+ N + G S LS+LKVL + +N SS+ L+ L L
Sbjct: 72 VPSALPANLEV--LKLNDNSICALHG-SDFEGLSNLKVLELKNNLISSLSPSMLSSLVSL 128
Query: 292 TSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRA 351
SL N I+ + +L L ++ + N++ +SG L NL L S NFL
Sbjct: 129 QSLLVDGNNIESVTGPL--SLPNLKYMSMEKNKLHLISGNVFTSLQNLQFLSFSGNFLTK 186
Query: 352 LTQDLITPLKSLQELRLDDNDISM 375
+ +L P KSL L+++ N + +
Sbjct: 187 IPINL--P-KSLLSLKMERNQLKV 207
Score = 37 (18.1 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 643 LLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLE 685
L SL L + NQ VR + L+ L+ L N + ++
Sbjct: 191 LPKSLLSLKMERNQLKVVRFRDMRHLENLSHLYLSENLLSSID 233
>UNIPROTKB|F1SF23 [details] [associations]
symbol:LOC100520342 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0030512 "negative regulation of transforming
growth factor beta receptor signaling pathway" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0005614
"interstitial matrix" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005615
InterPro:IPR000483 SMART:SM00082 GO:GO:0030198 GO:GO:0000122
InterPro:IPR000372 SMART:SM00013 GO:GO:0030512 GO:GO:0005614
GeneTree:ENSGT00700000104286 EMBL:CU694620 RefSeq:XP_003121288.1
UniGene:Ssc.79026 Ensembl:ENSSSCT00000004699 GeneID:100520342
KEGG:ssc:100520342 OMA:LPHLKHM Uniprot:F1SF23
Length = 512
Score = 248 (92.4 bits), Expect = 8.4e-18, Sum P(2) = 8.4e-18
Identities = 93/311 (29%), Positives = 153/311 (49%)
Query: 64 CACDLPHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLP-GKFLEGVTLHG 122
C+CD +++C Y + E G+ P L + S + L F++ + L
Sbjct: 25 CSCDSEQSVQC-------YRLLEVPSGI-PSTTKKLY-ISHSKIQHLQLSNFIQMLALED 75
Query: 123 LVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYK 182
++ + +++ + F LS+ L+ L L N L +P++ L +L+ L L+ N +
Sbjct: 76 FILLASGTESVKNDTFKTLST-LKTLELWKNKLRRIPSA----LPASLEVLKLNDNSISV 130
Query: 183 LENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSV 242
L + F+GL L L+L N + +LS L+ LV+L+ L L GN ++ V L +
Sbjct: 131 LHRSDFEGLKKLTILELKNNLISSLSPSTLSSLVSLQSLVLDGN--SIETVEGPLALSHL 188
Query: 243 TDLDLSHNLL-AGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDK-LTSLSCHHNQ 300
T + + +N L P G T L SL+ LS++ N + + L K L SL N+
Sbjct: 189 THMSMENNKLHLLPAGFFT--SLQSLQFLSLSSNFLTQIP----INLPKSLLSLKMERNR 242
Query: 301 IDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPL 360
+ V+ + L LSHL L+ N + + GA L L+NLTTL+LS N L+ L L P
Sbjct: 243 LKVVSFEDLKHLENLSHLYLSENSLSSFDGAQL--LANLTTLELSQNQLQMLPLRL--PA 298
Query: 361 KSLQELRLDDN 371
+ LQ+L + +N
Sbjct: 299 R-LQKLDISNN 308
Score = 182 (69.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 87/287 (30%), Positives = 129/287 (44%)
Query: 98 SLLDCTLSNVTVLPGKFLEG---VTLHG-LVIS--------SGELKNISDGAFIGLSSPL 145
SL TLS++ L L+G T+ G L +S + +L + G F L S L
Sbjct: 154 SLSPSTLSSLVSLQSLVLDGNSIETVEGPLALSHLTHMSMENNKLHLLPAGFFTSLQS-L 212
Query: 146 QALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLM 205
Q L L +N L+ +P + L +L L + N+L + K L +L+ L LS N L
Sbjct: 213 QFLSLSSNFLTQIPIN----LPKSLLSLKMERNRLKVVSFEDLKHLENLSHLYLSENSLS 268
Query: 206 TLS-QDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRL 264
+ LA L TL + + Q L + + A LQ LD+S+NL+ + L
Sbjct: 269 SFDGAQLLANLTTLELSQNQLQMLPLRLPARLQ------KLDISNNLIQ-KVTAQDFQDL 321
Query: 265 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 324
LK L + +N S GAL +L++L+ N +L R TL+ LDL N
Sbjct: 322 RDLKHLFLDNNIVSLFEAGALQRCSQLSNLALEQN---LLLSIPLRLPGTLARLDLKGNA 378
Query: 325 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
I ++ L L L L+L +N + AL + L L+ L LD N
Sbjct: 379 IQDIAERELKDLKQLQVLNLRNNKISALDLKALEVLPRLRYLYLDGN 425
Score = 172 (65.6 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 79/281 (28%), Positives = 132/281 (46%)
Query: 95 ERVSLLDCTLSNVTVL-PGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNN 153
+++++L+ + ++ L P V+L LV+ ++ + +G + LS L + + NN
Sbjct: 140 KKLTILELKNNLISSLSPSTLSSLVSLQSLVLDGNSIETV-EGP-LALSH-LTHMSMENN 196
Query: 154 LLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLA 213
L ++P L +L L LS N L ++ K L SL + N+L +S + L
Sbjct: 197 KLHLLPAGFFTSLQ-SLQFLSLSSNFLTQIPINLPKSLLSLK---MERNRLKVVSFEDLK 252
Query: 214 PLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIA 273
L L L L N L+ S A Q L ++T L+LS N L + P +P + L+ L I+
Sbjct: 253 HLENLSHLYLSENSLS-SFDGA-QLLANLTTLELSQNQLQ--MLPLRLP--ARLQKLDIS 306
Query: 274 HNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASL 333
+N V L L L +N + + E + + S LS+L L N ++++ L
Sbjct: 307 NNLIQKVTAQDFQDLRDLKHLFLDNNIVSLFEAGALQRCSQLSNLALEQNLLLSIP---L 363
Query: 334 AHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 374
L LDL N ++ + + + LK LQ L L +N IS
Sbjct: 364 RLPGTLARLDLKGNAIQDIAERELKDLKQLQVLNLRNNKIS 404
Score = 152 (58.6 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 64/201 (31%), Positives = 94/201 (46%)
Query: 179 QLYKLENTSFKGL-SSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVA-AL 236
Q Y+L G+ S+ L +S++K+ L ++ L L + T SV
Sbjct: 34 QCYRLLEVP-SGIPSTTKKLYISHSKIQHLQLSNFIQMLALEDFILLASG-TESVKNDTF 91
Query: 237 QGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSC 296
+ L ++ L+L N L PS +P +SL+VL + N S + R GL KLT L
Sbjct: 92 KTLSTLKTLELWKNKLRRI--PSALP--ASLEVLKLNDNSISVLHRSDFEGLKKLTILEL 147
Query: 297 HHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDL 356
+N I L + +L +L L L N I V G LA LS+LT + + +N L L
Sbjct: 148 KNNLISSLSPSTLSSLVSLQSLVLDGNSIETVEGP-LA-LSHLTHMSMENNKLHLLPAGF 205
Query: 357 ITPLKSLQELRLDDNDISMEP 377
T L+SLQ L L N ++ P
Sbjct: 206 FTSLQSLQFLSLSSNFLTQIP 226
Score = 42 (19.8 bits), Expect = 8.4e-18, Sum P(2) = 8.4e-18
Identities = 19/65 (29%), Positives = 29/65 (44%)
Query: 616 IPVAQQEDDINRNNSDSRYVKLQATTIL-LSSLKVLSIAHNQFSSVRRGALAGLDKLTSL 674
+P Q+ DI+ N K+ A L LK L + +N S GAL +L++L
Sbjct: 296 LPARLQKLDISNNLIQ----KVTAQDFQDLRDLKHLFLDNNIVSLFEAGALQRCSQLSNL 351
Query: 675 SCHHN 679
+ N
Sbjct: 352 ALEQN 356
Score = 38 (18.4 bits), Expect = 2.2e-17, Sum P(2) = 2.2e-17
Identities = 11/43 (25%), Positives = 19/43 (44%)
Query: 643 LLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLE 685
L +L L + N + L L +L L+ +N+I L+
Sbjct: 365 LPGTLARLDLKGNAIQDIAERELKDLKQLQVLNLRNNKISALD 407
>RGD|1307733 [details] [associations]
symbol:Lgr5 "leucine rich repeat containing G protein coupled
receptor 5" species:10116 "Rattus norvegicus" [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016500 "protein-hormone receptor
activity" evidence=IEA] [GO:0048839 "inner ear development"
evidence=IEA;ISO] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 InterPro:IPR017452
Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373 PROSITE:PS50262
PROSITE:PS51450 RGD:1307733 GO:GO:0016021 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0048839 GO:GO:0016500 EMBL:CH473960
GeneTree:ENSGT00650000092962 CTD:8549 KO:K04308 OMA:FNPHFKE
OrthoDB:EOG46143B IPI:IPI00360187 RefSeq:NP_001100254.1
UniGene:Rn.214063 Ensembl:ENSRNOT00000005814 GeneID:299802
KEGG:rno:299802 UCSC:RGD:1307733 NextBio:645794 Uniprot:D4AC13
Length = 907
Score = 238 (88.8 bits), Expect = 8.9e-18, Sum P(2) = 8.9e-18
Identities = 101/335 (30%), Positives = 144/335 (42%)
Query: 64 CACDLPHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVT-LHG 122
C C+L + + SDL +SE L S LD +++N++ LP L + L
Sbjct: 38 CHCELDGRMLLRVDCSDL-GLSELPSNLSVF--TSYLDLSMNNISQLPASLLHRLRFLEE 94
Query: 123 LVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYK 182
L ++ L +I GAF GL S L+ L L NN L VP AL L +L L L N +
Sbjct: 95 LRLAGNALTHIPKGAFAGLHS-LKVLMLQNNQLRQVPEEALQNLR-SLQSLRLDANHISY 152
Query: 183 LENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSV 242
+ + F GL SL L L N L + L L+ + L N++ A L S+
Sbjct: 153 VPPSCFSGLHSLRHLWLDDNALTDVPVQAFRSLSALQAMTLALNKIHHIADHAFGNLSSL 212
Query: 243 TDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID 302
L L HN LG L SL+ L + +N A+ L L L H N I
Sbjct: 213 VVLHL-HNNRIHSLGKKCFDGLHSLETLDLNYNNLDEFPT-AIKTLSNLKELGFHSNNIR 270
Query: 303 VLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQ--DLITPL 360
+ + +F +L + N I V ++ HL L TL L N +T+ DL T
Sbjct: 271 SIPERAFVGNPSLITIHFYDNPIQFVGISAFQHLPELRTLTL--NGASQITEFPDL-TGT 327
Query: 361 KSLQELRLDDNDISMEPECIYVGF-NTMDLELIYS 394
+L+ L L IS P+ + N L+L Y+
Sbjct: 328 ATLESLTLTGAKISSLPQTVCDQLPNLQVLDLSYN 362
Score = 192 (72.6 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 72/255 (28%), Positives = 117/255 (45%)
Query: 118 VTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSH 177
V LH + + + ++ F GL S L+ L L N L PT A+ L+ NL L
Sbjct: 213 VVLH---LHNNRIHSLGKKCFDGLHS-LETLDLNYNNLDEFPT-AIKTLS-NLKELGFHS 266
Query: 178 NQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQ 237
N + + +F G SL + N + + L LR L L G ++ L
Sbjct: 267 NNIRSIPERAFVGNPSLITIHFYDNPIQFVGISAFQHLPELRTLTLNGAS-QITEFPDLT 325
Query: 238 GLRSVTDLDLSHNLLAGPLGPSTV-PRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSC 296
G ++ L L+ ++ P TV +L +L+VL +++N + +L+G KL +
Sbjct: 326 GTATLESLTLTGAKISSL--PQTVCDQLPNLQVLDLSYNLLEDLP--SLSGCQKLQKIDL 381
Query: 297 HHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDL 356
HN+I ++ +F+ L L L+LA N+I + + + L +L LDLS N L +
Sbjct: 382 RHNEIYEIKGGTFQQLFNLRSLNLARNKIAIIHPNAFSTLPSLIKLDLSSNLLSSFP--- 438
Query: 357 ITPLKSLQELRLDDN 371
+T L L L+L N
Sbjct: 439 VTGLHGLTHLKLTGN 453
Score = 188 (71.2 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 83/311 (26%), Positives = 138/311 (44%)
Query: 71 TLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGEL 130
+LR AN Y GL + L D L++V V + L L + ++ ++
Sbjct: 142 SLRLDANHIS-YVPPSCFSGLHSLRHLWLDDNALTDVPVQAFRSLSA--LQAMTLALNKI 198
Query: 131 KNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKG 190
+I+D AF LSS L L L NN + + L +L+ LDL++N L + T+ K
Sbjct: 199 HHIADHAFGNLSS-LVVLHLHNNRIHSLGKKCFDGLH-SLETLDLNYNNLDEFP-TAIKT 255
Query: 191 LSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHN 250
LS+L L N + ++ + +L + N + ++A Q L + L L+
Sbjct: 256 LSNLKELGFHSNNIRSIPERAFVGNPSLITIHFYDNPIQFVGISAFQHLPELRTLTLN-- 313
Query: 251 LLAGPLGPSTVPRLS---SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLED- 306
G + P L+ +L+ L++ + SS+ + L L L +N +LED
Sbjct: 314 ---GASQITEFPDLTGTATLESLTLTGAKISSLPQTVCDQLPNLQVLDLSYN---LLEDL 367
Query: 307 HSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQEL 366
S L +DL HN I + G + L NL +L+L+ N + + + + L SL +L
Sbjct: 368 PSLSGCQKLQKIDLRHNEIYEIKGGTFQQLFNLRSLNLARNKIAIIHPNAFSTLPSLIKL 427
Query: 367 RLDDNDISMEP 377
L N +S P
Sbjct: 428 DLSSNLLSSFP 438
Score = 143 (55.4 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 53/183 (28%), Positives = 89/183 (48%)
Query: 93 PDERVSLLDCTLSNVTVLPGKFLEGV-TLHGLVISSGELKNISDGAFIGLSSPLQALGLP 151
P+ R L+ S +T P L G TL L ++ ++ ++ L + LQ L L
Sbjct: 305 PELRTLTLNGA-SQITEFPD--LTGTATLESLTLTGAKISSLPQTVCDQLPN-LQVLDLS 360
Query: 152 NNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDC 211
NLL +P+ L+ L ++DL HN++Y+++ +F+ L +L L+L+ NK+ + +
Sbjct: 361 YNLLEDLPS--LSG-CQKLQKIDLRHNEIYEIKGGTFQQLFNLRSLNLARNKIAIIHPNA 417
Query: 212 LAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLS 271
+ L +L L L N L+ V L GL T L L+ N L PS LK++
Sbjct: 418 FSTLPSLIKLDLSSNLLSSFPVTGLHGL---THLKLTGNRALQSLIPSA--NFPELKIIE 472
Query: 272 IAH 274
+ +
Sbjct: 473 MPY 475
Score = 62 (26.9 bits), Expect = 8.9e-18, Sum P(2) = 8.9e-18
Identities = 12/46 (26%), Positives = 25/46 (54%)
Query: 647 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L+ + + HN+ ++ G L L SL+ N+I ++ ++FS +
Sbjct: 376 LQKIDLRHNEIYEIKGGTFQQLFNLRSLNLARNKIAIIHPNAFSTL 421
Score = 57 (25.1 bits), Expect = 3.0e-17, Sum P(2) = 3.0e-17
Identities = 13/49 (26%), Positives = 27/49 (55%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L +L+VL +++N + +L+G KL + HN+I ++ +F +
Sbjct: 351 LPNLQVLDLSYNLLEDLP--SLSGCQKLQKIDLRHNEIYEIKGGTFQQL 397
>UNIPROTKB|Q5TJ59 [details] [associations]
symbol:TLR3 "Toll-like receptor 3" species:9913 "Bos
taurus" [GO:0010008 "endosome membrane" evidence=IEA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0045087 "innate
immune response" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0006954 "inflammatory response" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA] [GO:0050729
"positive regulation of inflammatory response" evidence=IEA]
[GO:0043330 "response to exogenous dsRNA" evidence=IEA] [GO:0034138
"toll-like receptor 3 signaling pathway" evidence=IEA] [GO:0032722
"positive regulation of chemokine production" evidence=IEA]
[GO:0004888 "transmembrane signaling receptor activity"
evidence=IEA] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0002756 "MyD88-independent toll-like receptor
signaling pathway" evidence=IEA] InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 GO:GO:0016021 GO:GO:0007165
GO:GO:0005789 GO:GO:0006954 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0045087
GO:GO:0003723 GO:GO:0010008 InterPro:IPR000372 SMART:SM00013
SUPFAM:SSF52200 EMBL:AJ812026 IPI:IPI00713414 RefSeq:NP_001008664.1
UniGene:Bt.12298 HSSP:O15455 ProteinModelPortal:Q5TJ59
STRING:Q5TJ59 PRIDE:Q5TJ59 GeneID:281535 KEGG:bta:281535 CTD:7098
HOVERGEN:HBG023181 InParanoid:Q5TJ59 KO:K05401 OrthoDB:EOG4N30N8
NextBio:20805490 PANTHER:PTHR24365:SF5 Uniprot:Q5TJ59
Length = 904
Score = 233 (87.1 bits), Expect = 9.5e-18, Sum P(2) = 9.5e-18
Identities = 90/300 (30%), Positives = 140/300 (46%)
Query: 91 LEPDERVSLLDCTLSNVTVLPGKF--LEGVTLHGLVISSGELKNISDGAFIGLSSPLQAL 148
LE + + L + +S++T PG+F L +L L +SS ++K S G F L L L
Sbjct: 171 LENLQELLLSNNKISSLT--PGEFDFLGNSSLKRLELSSNQIKEFSPGCFHTLGE-LSGL 227
Query: 149 GLPNNLLSVVPTSALAPLAPN--LDRLDLSHNQLYKLENTSFKGLSSLNF--LDLSYNKL 204
L N LS T L N ++ L LS NQL + +T+F GL N LDLS N L
Sbjct: 228 SLNNAKLSPSLTEKLCLELSNTSIENLSLSSNQLDTISHTTFDGLKQTNLTTLDLSRNSL 287
Query: 205 MTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPR- 263
+ D A L L L L+ N + + GL ++ LDL + + +++P+
Sbjct: 288 RVMGNDSFAWLPHLEYLSLEYNNIEHLSSRSFYGLSNLRRLDLRRSFTRQSISLTSLPKI 347
Query: 264 -------LSSLKVLSIAHNQFSSVRRGALAGLDKLT--SLSCHHNQIDVLEDHSFRALS- 313
L L+ L++ N F ++R GL +L SLS + + L + +F +L+
Sbjct: 348 DDFSFQWLKCLEYLNMDDNNFPGIKRNTFTGLVRLKFLSLSNSFSSLRTLTNETFLSLAG 407
Query: 314 -TLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFL-RALTQDLITPLKSLQELRLDDN 371
L LDL N+I + + + L +L LDL N + + LT L ++ E+ L N
Sbjct: 408 CPLLLLDLTKNKISKIQSGAFSWLGHLEVLDLGLNEIGQELTGQEWRGLDNIVEIYLSYN 467
Score = 208 (78.3 bits), Expect = 5.2e-15, Sum P(2) = 5.2e-15
Identities = 84/304 (27%), Positives = 139/304 (45%)
Query: 96 RVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLL 155
R + DC+ +T +P +T+ L ++ +L+ + F S G N++
Sbjct: 32 RHEVADCSHLKLTQIPDDLPTNITV--LNLTHNQLRRLPPANFTRYSQLTTLDGGFNSIS 89
Query: 156 SVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPL 215
+ P L P L+ L+L HN++ +L + +F +L L L N + + D L
Sbjct: 90 KLEPE--LCQSLPWLEILNLQHNEISQLSDKTFIFCMNLTELHLMSNSIQKIKNDPFKNL 147
Query: 216 VTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRL--SSLKVLSIA 273
L L L N L+ + + L ++ +L LS+N ++ L P L SSLK L ++
Sbjct: 148 KNLIKLDLSHNGLSSTKLGTQLQLENLQELLLSNNKISS-LTPGEFDFLGNSSLKRLELS 206
Query: 274 HNQFSSVRRGALAGLDKLTSLSCHHNQIDV-LEDHSFRALSTLS--HLDLAHNRIVAVSG 330
NQ G L +L+ LS ++ ++ L + LS S +L L+ N++ +S
Sbjct: 207 SNQIKEFSPGCFHTLGELSGLSLNNAKLSPSLTEKLCLELSNTSIENLSLSSNQLDTISH 266
Query: 331 ASLAHL--SNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS-MEPECIYVGFNTM 387
+ L +NLTTLDLS N LR + D L L+ L L+ N+I + Y N
Sbjct: 267 TTFDGLKQTNLTTLDLSRNSLRVMGNDSFAWLPHLEYLSLEYNNIEHLSSRSFYGLSNLR 326
Query: 388 DLEL 391
L+L
Sbjct: 327 RLDL 330
Score = 205 (77.2 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 86/294 (29%), Positives = 138/294 (46%)
Query: 96 RVSLLDCTLSNVTVLPGKFLEGVT-LHGLVISSGELKNISDGAFIGLSSPLQALGLPNNL 154
+++ LD ++++ L + + + L L + E+ +SD FI + L L L +N
Sbjct: 77 QLTTLDGGFNSISKLEPELCQSLPWLEILNLQHNEISQLSDKTFIFCMN-LTELHLMSNS 135
Query: 155 LSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQ---DC 211
+ + L NL +LDLSHN L + + L +L L LS NK+ +L+ D
Sbjct: 136 IQKIKNDPFKNLK-NLIKLDLSHNGLSSTKLGTQLQLENLQELLLSNNKISSLTPGEFDF 194
Query: 212 LAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLS--SLKV 269
L +L+ L L N++ L ++ L L++ L+ L LS S++
Sbjct: 195 LGNS-SLKRLELSSNQIKEFSPGCFHTLGELSGLSLNNAKLSPSLTEKLCLELSNTSIEN 253
Query: 270 LSIAHNQFSSVRRGALAGLDK--LTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVA 327
LS++ NQ ++ GL + LT+L N + V+ + SF L L +L L +N I
Sbjct: 254 LSLSSNQLDTISHTTFDGLKQTNLTTLDLSRNSLRVMGNDSFAWLPHLEYLSLEYNNIEH 313
Query: 328 VSGASLAHLSNLTTLDLSHNFLR---ALTQ-----DLITP-LKSLQELRLDDND 372
+S S LSNL LDL +F R +LT D LK L+ L +DDN+
Sbjct: 314 LSSRSFYGLSNLRRLDLRRSFTRQSISLTSLPKIDDFSFQWLKCLEYLNMDDNN 367
Score = 174 (66.3 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 67/276 (24%), Positives = 134/276 (48%)
Query: 126 SSGELKNISDGAFIGLSS-PLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQL-YKL 183
S L+ +++ F+ L+ PL L L N +S + + A + L +L+ LDL N++ +L
Sbjct: 390 SFSSLRTLTNETFLSLAGCPLLLLDLTKNKISKIQSGAFSWLG-HLEVLDLGLNEIGQEL 448
Query: 184 ENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVV----AALQGL 239
++GL ++ + LSYNK + L+ + + +L+ L L+ R+ + V + + L
Sbjct: 449 TGQEWRGLDNIVEIYLSYNKYLELTTNSFTSVPSLQRLMLR--RVALKNVDCSPSPFRPL 506
Query: 240 RSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGA--------LAGLDKL 291
++ LDLS+N +A + + L L++L + HN + + + A L GL L
Sbjct: 507 PNLVILDLSNNNIAN-INDELLKGLEKLEILDLQHNNLARLWKHANPGGPVQFLKGLFHL 565
Query: 292 TSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRA 351
L+ N D + +F+ L L +DL N + + + + +L +L L N + +
Sbjct: 566 HILNLGSNGFDEIPVEAFKDLRELKSIDLGMNNLNILPQSVFDNQVSLKSLSLQKNLITS 625
Query: 352 LTQDLITP-LKSLQ--ELRLDDNDISMEPECIYVGF 384
+ + + P ++L ++R + D + E +V +
Sbjct: 626 VQKTVFGPAFRNLSYLDMRFNPFDCTCESIAWFVNW 661
Score = 152 (58.6 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 71/276 (25%), Positives = 115/276 (41%)
Query: 120 LHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSV--VPTSALAPLA--PNLDRLDL 175
L L + I F GL L+ L L N+ S+ + LA P L LDL
Sbjct: 358 LEYLNMDDNNFPGIKRNTFTGLVR-LKFLSLSNSFSSLRTLTNETFLSLAGCPLL-LLDL 415
Query: 176 SHNQLYKLENTSFKGLSSLNFLDLSYNKL-MTLSQDCLAPLVTLRVLRLQGNRLTVSVVA 234
+ N++ K+++ +F L L LDL N++ L+ L + + L N+
Sbjct: 416 TKNKISKIQSGAFSWLGHLEVLDLGLNEIGQELTGQEWRGLDNIVEIYLSYNKYLELTTN 475
Query: 235 ALQGLRSVTDLDLSHNLLAG-PLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTS 293
+ + S+ L L L PS L +L +L +++N +++ L GL+KL
Sbjct: 476 SFTSVPSLQRLMLRRVALKNVDCSPSPFRPLPNLVILDLSNNNIANINDELLKGLEKLEI 535
Query: 294 LSCHHNQIDVLEDHS-----FRALSTLSHL---DLAHNRIVAVSGASLAHLSNLTTLDLS 345
L HN + L H+ + L L HL +L N + + L L ++DL
Sbjct: 536 LDLQHNNLARLWKHANPGGPVQFLKGLFHLHILNLGSNGFDEIPVEAFKDLRELKSIDLG 595
Query: 346 HNFLRALTQDLITPLKSLQELRLDDNDISMEPECIY 381
N L L Q + SL+ L L N I+ + ++
Sbjct: 596 MNNLNILPQSVFDNQVSLKSLSLQKNLITSVQKTVF 631
Score = 142 (55.0 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 68/296 (22%), Positives = 130/296 (43%)
Query: 72 LRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVT-LHGLVISSGEL 130
L ++N+ D + + + GL+ ++ LD + +++ V+ + L L + +
Sbjct: 254 LSLSSNQLDTISHT-TFDGLK-QTNLTTLDLSRNSLRVMGNDSFAWLPHLEYLSLEYNNI 311
Query: 131 KNISDGAFIGLSSPLQALGLPNNLL-SVVPTSALAPL-------APNLDRLDLSHNQLYK 182
+++S +F GLS+ L+ L L + + ++L + L+ L++ N
Sbjct: 312 EHLSSRSFYGLSN-LRRLDLRRSFTRQSISLTSLPKIDDFSFQWLKCLEYLNMDDNNFPG 370
Query: 183 LENTSFKGLSSLNFLDLS--YNKLMTLSQDCLAPLV--TLRVLRLQGNRLTVSVVAALQG 238
++ +F GL L FL LS ++ L TL+ + L L +L L N+++ A
Sbjct: 371 IKRNTFTGLVRLKFLSLSNSFSSLRTLTNETFLSLAGCPLLLLDLTKNKISKIQSGAFSW 430
Query: 239 LRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHH 298
L + LDL N + L L ++ + +++N++ + + + L L
Sbjct: 431 LGHLEVLDLGLNEIGQELTGQEWRGLDNIVEIYLSYNKYLELTTNSFTSVPSLQRLMLRR 490
Query: 299 NQIDVLE--DHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRAL 352
+ ++ FR L L LDL++N I ++ L L L LDL HN L L
Sbjct: 491 VALKNVDCSPSPFRPLPNLVILDLSNNNIANINDELLKGLEKLEILDLQHNNLARL 546
Score = 141 (54.7 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 64/219 (29%), Positives = 93/219 (42%)
Query: 97 VSLLDCTLSNV-TVLPGKFLEGV-TLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNL 154
+ +LD L+ + L G+ G+ + + +S + ++ +F + S LQ L L
Sbjct: 434 LEVLDLGLNEIGQELTGQEWRGLDNIVEIYLSYNKYLELTTNSFTSVPS-LQRLMLRRVA 492
Query: 155 LSVVPTSA--LAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDC- 211
L V S PL PNL LDLS+N + + + KGL L LDL +N L L +
Sbjct: 493 LKNVDCSPSPFRPL-PNLVILDLSNNNIANINDELLKGLEKLEILDLQHNNLARLWKHAN 551
Query: 212 -------LAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRL 264
L L L +L L N V A + LR + +DL N L L S
Sbjct: 552 PGGPVQFLKGLFHLHILNLGSNGFDEIPVEAFKDLRELKSIDLGMNNL-NILPQSVFDNQ 610
Query: 265 SSLKVLSIAHNQFSSVRRGALA-GLDKLTSLSCHHNQID 302
SLK LS+ N +SV++ L+ L N D
Sbjct: 611 VSLKSLSLQKNLITSVQKTVFGPAFRNLSYLDMRFNPFD 649
Score = 67 (28.6 bits), Expect = 9.5e-18, Sum P(2) = 9.5e-18
Identities = 14/45 (31%), Positives = 25/45 (55%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHS 688
L +L +L +++N +++ L GL+KL L HN + L H+
Sbjct: 506 LPNLVILDLSNNNIANINDELLKGLEKLEILDLQHNNLARLWKHA 550
Score = 56 (24.8 bits), Expect = 7.2e-14, Sum P(2) = 7.2e-14
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLT--SLSCHHNQIDVLEDHSFSNVIG 694
L L+ L++ N F ++R GL +L SLS + + L + +F ++ G
Sbjct: 355 LKCLEYLNMDDNNFPGIKRNTFTGLVRLKFLSLSNSFSSLRTLTNETFLSLAG 407
Score = 53 (23.7 bits), Expect = 2.7e-16, Sum P(2) = 2.7e-16
Identities = 13/50 (26%), Positives = 23/50 (46%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNVI 693
L L +L++ N F + A L +L S+ N +++L F N +
Sbjct: 562 LFHLHILNLGSNGFDEIPVEAFKDLRELKSIDLGMNNLNILPQSVFDNQV 611
Score = 48 (22.0 bits), Expect = 4.9e-13, Sum P(2) = 4.9e-13
Identities = 14/50 (28%), Positives = 24/50 (48%)
Query: 644 LSSLKVLSIAHNQFSSVRRGA-LAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L+VL + N+ G GLD + + +N+ L +SF++V
Sbjct: 431 LGHLEVLDLGLNEIGQELTGQEWRGLDNIVEIYLSYNKYLELTTNSFTSV 480
Score = 45 (20.9 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 625 INRNNSDSRYVKLQATTIL-LSS--LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
++ +NS S L T L L+ L +L + N+ S ++ GA + L L L N+I
Sbjct: 385 LSLSNSFSSLRTLTNETFLSLAGCPLLLLDLTKNKISKIQSGAFSWLGHLEVLDLGLNEI 444
Score = 38 (18.4 bits), Expect = 9.8e-15, Sum P(2) = 9.8e-15
Identities = 12/38 (31%), Positives = 17/38 (44%)
Query: 646 SLKVLSIAHNQFSSVRRGALA-GLDKLTSLSCHHNQID 682
SLK LS+ N +SV++ L+ L N D
Sbjct: 612 SLKSLSLQKNLITSVQKTVFGPAFRNLSYLDMRFNPFD 649
>MGI|MGI:1341817 [details] [associations]
symbol:Lgr5 "leucine rich repeat containing G protein
coupled receptor 5" species:10090 "Mus musculus" [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0004930 "G-protein
coupled receptor activity" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0048839
"inner ear development" evidence=IDA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450 MGI:MGI:1341817
GO:GO:0016021 GO:GO:0005886 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0048839 GO:GO:0016500 EMBL:CH466539
GeneTree:ENSGT00650000092962 HOVERGEN:HBG031675
HOGENOM:HOG000231829 CTD:8549 KO:K04308 OMA:FNPHFKE
OrthoDB:EOG46143B EMBL:AF110818 EMBL:AK132387 IPI:IPI00130319
PIR:JG0193 RefSeq:NP_034325.2 UniGene:Mm.42103
ProteinModelPortal:Q9Z1P4 SMR:Q9Z1P4 STRING:Q9Z1P4
PhosphoSite:Q9Z1P4 PRIDE:Q9Z1P4 DNASU:14160
Ensembl:ENSMUST00000020350 GeneID:14160 KEGG:mmu:14160
UCSC:uc007hbi.1 InParanoid:Q3V1L2 NextBio:285290 Bgee:Q9Z1P4
Genevestigator:Q9Z1P4 GermOnline:ENSMUSG00000020140 Uniprot:Q9Z1P4
Length = 907
Score = 238 (88.8 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 99/334 (29%), Positives = 143/334 (42%)
Query: 64 CACDLPHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVT-LHG 122
C C+L + + SDL +SE L S LD +++N++ LP L + L
Sbjct: 38 CHCELDGRMLLRVDCSDL-GLSELPSNLSVF--TSYLDLSMNNISQLPASLLHRLCFLEE 94
Query: 123 LVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYK 182
L ++ L +I GAF GL S L+ L L NN L VP AL L +L L L N +
Sbjct: 95 LRLAGNALTHIPKGAFTGLHS-LKVLMLQNNQLRQVPEEALQNLR-SLQSLRLDANHISY 152
Query: 183 LENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSV 242
+ + F GL SL L L N L + L L+ + L N++ A L S+
Sbjct: 153 VPPSCFSGLHSLRHLWLDDNALTDVPVQAFRSLSALQAMTLALNKIHHIADYAFGNLSSL 212
Query: 243 TDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID 302
L L HN LG L SL+ L + +N A+ L L L H N I
Sbjct: 213 VVLHL-HNNRIHSLGKKCFDGLHSLETLDLNYNNLDEFPT-AIKTLSNLKELGFHSNNIR 270
Query: 303 VLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQ-DLITPLK 361
+ + +F +L + N I V ++ HL L TL L N +T+ +T
Sbjct: 271 SIPERAFVGNPSLITIHFYDNPIQFVGVSAFQHLPELRTLTL--NGASHITEFPHLTGTA 328
Query: 362 SLQELRLDDNDISMEPECIYVGF-NTMDLELIYS 394
+L+ L L IS P+ + N L+L Y+
Sbjct: 329 TLESLTLTGAKISSLPQAVCDQLPNLQVLDLSYN 362
Score = 191 (72.3 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 84/311 (27%), Positives = 139/311 (44%)
Query: 71 TLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGEL 130
+LR AN Y GL + L D L++V V + L L + ++ ++
Sbjct: 142 SLRLDANHIS-YVPPSCFSGLHSLRHLWLDDNALTDVPVQAFRSLSA--LQAMTLALNKI 198
Query: 131 KNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKG 190
+I+D AF LSS L L L NN + + L +L+ LDL++N L + T+ K
Sbjct: 199 HHIADYAFGNLSS-LVVLHLHNNRIHSLGKKCFDGLH-SLETLDLNYNNLDEFP-TAIKT 255
Query: 191 LSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHN 250
LS+L L N + ++ + +L + N + V+A Q L + L L+
Sbjct: 256 LSNLKELGFHSNNIRSIPERAFVGNPSLITIHFYDNPIQFVGVSAFQHLPELRTLTLN-- 313
Query: 251 LLAGPLGPSTVPRLS---SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLED- 306
G + P L+ +L+ L++ + SS+ + L L L +N +LED
Sbjct: 314 ---GASHITEFPHLTGTATLESLTLTGAKISSLPQAVCDQLPNLQVLDLSYN---LLEDL 367
Query: 307 HSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQEL 366
S L +DL HN I + G++ L NL +L+L+ N + + + + L SL +L
Sbjct: 368 PSLSGCQKLQKIDLRHNEIYEIKGSTFQQLFNLRSLNLAWNKIAIIHPNAFSTLPSLIKL 427
Query: 367 RLDDNDISMEP 377
L N +S P
Sbjct: 428 DLSSNLLSSFP 438
Score = 190 (71.9 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 70/254 (27%), Positives = 116/254 (45%)
Query: 118 VTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSH 177
V LH + + + ++ F GL S L+ L L N L PT A+ L+ NL L
Sbjct: 213 VVLH---LHNNRIHSLGKKCFDGLHS-LETLDLNYNNLDEFPT-AIKTLS-NLKELGFHS 266
Query: 178 NQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQ 237
N + + +F G SL + N + + L LR L L G ++ L
Sbjct: 267 NNIRSIPERAFVGNPSLITIHFYDNPIQFVGVSAFQHLPELRTLTLNGAS-HITEFPHLT 325
Query: 238 GLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCH 297
G ++ L L+ ++ L + +L +L+VL +++N + +L+G KL +
Sbjct: 326 GTATLESLTLTGAKISS-LPQAVCDQLPNLQVLDLSYNLLEDLP--SLSGCQKLQKIDLR 382
Query: 298 HNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLI 357
HN+I ++ +F+ L L L+LA N+I + + + L +L LDLS N L + +
Sbjct: 383 HNEIYEIKGSTFQQLFNLRSLNLAWNKIAIIHPNAFSTLPSLIKLDLSSNLLSSFP---V 439
Query: 358 TPLKSLQELRLDDN 371
T L L L+L N
Sbjct: 440 TGLHGLTHLKLTGN 453
Score = 156 (60.0 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 59/211 (27%), Positives = 103/211 (48%)
Query: 93 PDERVSLLDCTLSNVTVLPGKFLEGV-TLHGLVISSGELKNISDGAFIGLSSPLQALGLP 151
P+ R L+ S++T P L G TL L ++ ++ ++ L + LQ L L
Sbjct: 305 PELRTLTLNGA-SHITEFP--HLTGTATLESLTLTGAKISSLPQAVCDQLPN-LQVLDLS 360
Query: 152 NNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDC 211
NLL +P+ L+ L ++DL HN++Y+++ ++F+ L +L L+L++NK+ + +
Sbjct: 361 YNLLEDLPS--LSG-CQKLQKIDLRHNEIYEIKGSTFQQLFNLRSLNLAWNKIAIIHPNA 417
Query: 212 LAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLS 271
+ L +L L L N L+ V L GL T L L+ N L PS LK++
Sbjct: 418 FSTLPSLIKLDLSSNLLSSFPVTGLHGL---THLKLTGNRALQSLIPSA--NFPELKIIE 472
Query: 272 IAHNQFSSVRRGALAGLDKLTSLSCHHNQID 302
+ S+ + A G + + +S N+ D
Sbjct: 473 MP----SAYQCCAFGGCENVYKISNQWNKDD 499
Score = 61 (26.5 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 15/55 (27%), Positives = 29/55 (52%)
Query: 638 QATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
QA L +L+VL +++N + +L+G KL + HN+I ++ +F +
Sbjct: 345 QAVCDQLPNLQVLDLSYNLLEDLP--SLSGCQKLQKIDLRHNEIYEIKGSTFQQL 397
Score = 54 (24.1 bits), Expect = 6.1e-17, Sum P(2) = 6.1e-17
Identities = 11/46 (23%), Positives = 24/46 (52%)
Query: 647 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L+ + + HN+ ++ L L SL+ N+I ++ ++FS +
Sbjct: 376 LQKIDLRHNEIYEIKGSTFQQLFNLRSLNLAWNKIAIIHPNAFSTL 421
>ZFIN|ZDB-GENE-031113-8 [details] [associations]
symbol:lrrc15 "leucine rich repeat containing 15"
species:7955 "Danio rerio" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001611 PROSITE:PS51450 ZFIN:ZDB-GENE-031113-8
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00700000104286
OMA:NHLEYIP EMBL:BX950188 EMBL:BX957243 IPI:IPI00628487
UniGene:Dr.18765 Ensembl:ENSDART00000104248 HOVERGEN:HBG095770
Uniprot:B0S8K3
Length = 564
Score = 246 (91.7 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 85/302 (28%), Positives = 146/302 (48%)
Query: 71 TLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVT-LHGLVISSGE 129
TL + NK L + SL L P V+ LD + + ++ L G+ L L++
Sbjct: 125 TLTLSGNK--LEVLPSSL--LTPLVNVNKLDLSKNLLSSLSEDAFRGLDQLEMLMLQRNS 180
Query: 130 LKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFK 189
+K + F GLS L++L L N L+ +P L NL+ L L N++ +L F
Sbjct: 181 IKQLHSSTFQGLSH-LRSLFLQQNELTDIPAGLFDDLV-NLEVLHLQDNKIEQLPANLFA 238
Query: 190 GLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSH 249
+ L L LS N+L L L L L NRL+ ++ G ++ +L L
Sbjct: 239 KVQKLKKLYLSSNRLSLLPSGIFLNLPNLTHFSLYDNRLS-RLMPETFGPMALQELWLYD 297
Query: 250 NLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 309
NLL L + L+++++L I+ N+ + GA GL +L +S H N++ +E F
Sbjct: 298 NLLTH-LEENVFSNLTNIRLLVISRNRIQYISPGAFNGLIELKEVSLHTNRLTNIEPGIF 356
Query: 310 RALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLD 369
R L L+++ + +N+I + L +S L+ L++ +N L+ L +D + L ++ + L
Sbjct: 357 RGLPNLANISIENNQIKQIPIQLLDGVSRLSLLEMQNNSLQNLPKDFLNTLSIVENVILH 416
Query: 370 DN 371
+N
Sbjct: 417 EN 418
Score = 200 (75.5 bits), Expect = 7.9e-13, Sum P(2) = 7.9e-13
Identities = 80/288 (27%), Positives = 132/288 (45%)
Query: 107 VTVLPGKFLEGVT-LHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAP 165
+T LP + +T L L +S +L+ + L + + L L NLLS + A
Sbjct: 109 LTSLPDNLFQNLTALTTLTLSGNKLEVLPSSLLTPLVN-VNKLDLSKNLLSSLSEDAFRG 167
Query: 166 LAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQG 225
L L+ L L N + +L +++F+GLS L L L N+L + LV L VL LQ
Sbjct: 168 L-DQLEMLMLQRNSIKQLHSSTFQGLSHLRSLFLQQNELTDIPAGLFDDLVNLEVLHLQD 226
Query: 226 NR---LTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTV-PRLSSLKVLSIAHNQFSSVR 281
N+ L ++ A +Q L+ L LS N L+ L PS + L +L S+ N+ S +
Sbjct: 227 NKIEQLPANLFAKVQKLKK---LYLSSNRLS--LLPSGIFLNLPNLTHFSLYDNRLSRLM 281
Query: 282 RGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTT 341
+ L L + N + LE++ F L+ + L ++ NRI +S + L L
Sbjct: 282 PETFGPM-ALQELWLYDNLLTHLEENVFSNLTNIRLLVISRNRIQYISPGAFNGLIELKE 340
Query: 342 LDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDL 389
+ L N L + + L +L + +++N I P + G + + L
Sbjct: 341 VSLHTNRLTNIEPGIFRGLPNLANISIENNQIKQIPIQLLDGVSRLSL 388
Score = 195 (73.7 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 61/219 (27%), Positives = 98/219 (44%)
Query: 165 PLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMT-LSQDCLAPLVTLRVLRL 223
P+ P ++ L +S+ + L+ + F+ + L ++ N +T + L VL
Sbjct: 45 PMPPTINALVISNTSIQSLKPSDFQTFAETLTLFVAKNSNITEVEPHTFDQAFNLNVLGF 104
Query: 224 QGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRG 283
G LT Q L ++T L LS N L L S + L ++ L ++ N SS+
Sbjct: 105 SGTMLTSLPDNLFQNLTALTTLTLSGNKLE-VLPSSLLTPLVNVNKLDLSKNLLSSLSED 163
Query: 284 ALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLD 343
A GLD+L L N I L +F+ LS L L L N + + L NL L
Sbjct: 164 AFRGLDQLEMLMLQRNSIKQLHSSTFQGLSHLRSLFLQQNELTDIPAGLFDDLVNLEVLH 223
Query: 344 LSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYV 382
L N + L +L ++ L++L L N +S+ P I++
Sbjct: 224 LQDNKIEQLPANLFAKVQKLKKLYLSSNRLSLLPSGIFL 262
Score = 190 (71.9 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 73/258 (28%), Positives = 106/258 (41%)
Query: 145 LQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKL 204
+ AL + N + + S A L ++ + ++E +F +LN L S L
Sbjct: 50 INALVISNTSIQSLKPSDFQTFAETLTLFVAKNSNITEVEPHTFDQAFNLNVLGFSGTML 109
Query: 205 MTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRL 264
+L + L L L L GN+L V + L L +V LDLS NLL+ L L
Sbjct: 110 TSLPDNLFQNLTALTTLTLSGNKLEVLPSSLLTPLVNVNKLDLSKNLLSS-LSEDAFRGL 168
Query: 265 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 324
L++L + N + GL L SL N++ + F L L L L N+
Sbjct: 169 DQLEMLMLQRNSIKQLHSSTFQGLSHLRSLFLQQNELTDIPAGLFDDLVNLEVLHLQDNK 228
Query: 325 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS-MEPECIYVG 383
I + A + L L LS N L L + L +L L DN +S + PE
Sbjct: 229 IEQLPANLFAKVQKLKKLYLSSNRLSLLPSGIFLNLPNLTHFSLYDNRLSRLMPET---- 284
Query: 384 FNTMDL-EL-IYSGVWRH 399
F M L EL +Y + H
Sbjct: 285 FGPMALQELWLYDNLLTH 302
Score = 109 (43.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 32/133 (24%), Positives = 63/133 (47%)
Query: 261 VPRLSSLKVLSIAHNQFSSVRRGALAGL-DKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 319
+P ++ L I++ S++ + LT ++ I +E H+F L+ L
Sbjct: 44 LPMPPTINALVISNTSIQSLKPSDFQTFAETLTLFVAKNSNITEVEPHTFDQAFNLNVLG 103
Query: 320 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPEC 379
+ + ++ +L+ LTTL LS N L L L+TPL ++ +L L N +S E
Sbjct: 104 FSGTMLTSLPDNLFQNLTALTTLTLSGNKLEVLPSSLLTPLVNVNKLDLSKNLLSSLSED 163
Query: 380 IYVGFNTMDLELI 392
+ G + +++ ++
Sbjct: 164 AFRGLDQLEMLML 176
Score = 65 (27.9 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 14/46 (30%), Positives = 27/46 (58%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
L+++++L I+ N+ + GA GL +L +S H N++ +E F
Sbjct: 311 LTNIRLLVISRNRIQYISPGAFNGLIELKEVSLHTNRLTNIEPGIF 356
Score = 63 (27.2 bits), Expect = 7.9e-14, Sum P(2) = 7.9e-14
Identities = 18/57 (31%), Positives = 31/57 (54%)
Query: 625 INRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
I+RN +Y+ A L+ LK +S+ N+ +++ G GL L ++S +NQI
Sbjct: 319 ISRNRI--QYISPGAFNGLIE-LKEVSLHTNRLTNIEPGIFRGLPNLANISIENNQI 372
Score = 48 (22.0 bits), Expect = 7.9e-13, Sum P(2) = 7.9e-13
Identities = 14/50 (28%), Positives = 24/50 (48%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNVI 693
L +L +SI +NQ + L G+ +L+ L +N + L F N +
Sbjct: 359 LPNLANISIENNQIKQIPIQLLDGVSRLSLLEMQNNSLQNLPK-DFLNTL 407
Score = 44 (20.5 bits), Expect = 7.4e-12, Sum P(2) = 7.4e-12
Identities = 13/63 (20%), Positives = 27/63 (42%)
Query: 631 DSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFS 690
D+R +L T +L+ L + N + + + L + L N+I + +F+
Sbjct: 274 DNRLSRLMPETFGPMALQELWLYDNLLTHLEENVFSNLTNIRLLVISRNRIQYISPGAFN 333
Query: 691 NVI 693
+I
Sbjct: 334 GLI 336
>FB|FBgn0010452 [details] [associations]
symbol:trn "tartan" species:7227 "Drosophila melanogaster"
[GO:0005886 "plasma membrane" evidence=NAS] [GO:0007155 "cell
adhesion" evidence=NAS] [GO:0007424 "open tracheal system
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=TAS] [GO:0035147 "branch fusion, open tracheal system"
evidence=IMP] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] InterPro:IPR001611 PROSITE:PS51450
EMBL:AE014296 GO:GO:0016477 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 GO:GO:0008045
InterPro:IPR000372 SMART:SM00013 GO:GO:0007476 GO:GO:0035147
HSSP:Q9BZR6 GeneTree:ENSGT00700000104286 FlyBase:FBgn0010452
CTD:38721 EMBL:AY051439 RefSeq:NP_524055.2 UniGene:Dm.2255
SMR:Q9VU51 MINT:MINT-1567723 STRING:Q9VU51
EnsemblMetazoa:FBtr0075890 GeneID:39491 KEGG:dme:Dmel_CG11280
UCSC:CG11280-RA InParanoid:Q9VU51 OMA:RTFAYQK GenomeRNAi:39491
NextBio:813916 Uniprot:Q9VU51
Length = 737
Score = 247 (92.0 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 77/280 (27%), Positives = 121/280 (43%)
Query: 90 GLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALG 149
G + D+ ++ C + VLP ++ LVI S ++K I I + L L
Sbjct: 33 GCQCDDNTLVVQCGEGQLDVLP--IALNPSIQRLVIKSNKIKTIDSS--IQFYAELTFLD 88
Query: 150 LPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQ 209
L +N L +P A L + L+HN++ ++ N +F GLS++ L+L N++ L Q
Sbjct: 89 LSSNHLMTIPQRTFA-YQKKLQEVHLNHNKIGQISNKTFIGLSAVTVLNLRGNQISELHQ 147
Query: 210 DCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKV 269
PL+ + L L NR+ A GL + L L N L P + SL
Sbjct: 148 GTFTPLLKIEELNLGENRIGYLDPKAFDGLSQLRILYLDDNALTTVPDPVIFQAMPSLAE 207
Query: 270 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 329
L + N S++ A L LT L + + SF L L LDL+ NR+ +
Sbjct: 208 LFLGMNTLQSIQADAFQDLKGLTRLELKGASLRNISHDSFLGLQELRILDLSDNRLDRIP 267
Query: 330 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLD 369
L+ L L L L N +++ LK L+ L ++
Sbjct: 268 SVGLSKLVRLEQLSLGQNDFEVISEGAFMGLKQLKRLEVN 307
Score = 200 (75.5 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 69/266 (25%), Positives = 119/266 (44%)
Query: 123 LVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYK 182
LV+ GE + D I L+ +Q L + +N + + +S L LDLS N L
Sbjct: 41 LVVQCGEGQ--LDVLPIALNPSIQRLVIKSNKIKTIDSSI--QFYAELTFLDLSSNHLMT 96
Query: 183 LENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSV 242
+ +F L + L++NK+ +S L + VL L+GN+++ L +
Sbjct: 97 IPQRTFAYQKKLQEVHLNHNKIGQISNKTFIGLSAVTVLNLRGNQISELHQGTFTPLLKI 156
Query: 243 TDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGAL-AGLDKLTSLSCHHNQI 301
+L+L N + G L P LS L++L + N ++V + + L L N +
Sbjct: 157 EELNLGENRI-GYLDPKAFDGLSQLRILYLDDNALTTVPDPVIFQAMPSLAELFLGMNTL 215
Query: 302 DVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLK 361
++ +F+ L L+ L+L + +S S L L LDLS N L + ++ L
Sbjct: 216 QSIQADAFQDLKGLTRLELKGASLRNISHDSFLGLQELRILDLSDNRLDRIPSVGLSKLV 275
Query: 362 SLQELRLDDNDISMEPECIYVGFNTM 387
L++L L ND + E ++G +
Sbjct: 276 RLEQLSLGQNDFEVISEGAFMGLKQL 301
Score = 164 (62.8 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 67/243 (27%), Positives = 104/243 (42%)
Query: 84 ISESLRG-LEPDERVSLLDCTLSNVTVLPGKFLEGVT-LHGLVISSGELKNISDGAFIGL 141
ISE +G P ++ L+ + + L K +G++ L L + L + D
Sbjct: 142 ISELHQGTFTPLLKIEELNLGENRIGYLDPKAFDGLSQLRILYLDDNALTTVPDPVIFQA 201
Query: 142 SSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSY 201
L L L N L + A L L RL+L L + + SF GL L LDLS
Sbjct: 202 MPSLAELFLGMNTLQSIQADAFQDLK-GLTRLELKGASLRNISHDSFLGLQELRILDLSD 260
Query: 202 NKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTV 261
N+L + L+ LV L L L N V A GL+ + L+++ L +
Sbjct: 261 NRLDRIPSVGLSKLVRLEQLSLGQNDFEVISEGAFMGLKQLKRLEVNGALRLKRVMTGAF 320
Query: 262 PRLSSLKVLSIAHNQFS-SVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 320
+L+ L+++ N+ V+ GAL+GL +L + N + L + F L LDL
Sbjct: 321 SDNGNLEYLNLSSNKMLLEVQEGALSGLSQLKHVVLKANALTSLAEGLF-PWKDLQTLDL 379
Query: 321 AHN 323
+ N
Sbjct: 380 SEN 382
Score = 47 (21.6 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 13/45 (28%), Positives = 25/45 (55%)
Query: 646 SLKVLSIAHNQFS-SVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
+L+ L+++ N+ V+ GAL+GL +L + N + L + F
Sbjct: 325 NLEYLNLSSNKMLLEVQEGALSGLSQLKHVVLKANALTSLAEGLF 369
>ZFIN|ZDB-GENE-091214-3 [details] [associations]
symbol:lingo4b "leucine rich repeat and Ig domain
containing 4b" species:7955 "Danio rerio" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-091214-3 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR003591 SMART:SM00369 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR025875
Pfam:PF12799 HOVERGEN:HBG057546 EMBL:BC171652 IPI:IPI00612243
UniGene:Dr.74856 ProteinModelPortal:B7ZVN7 eggNOG:NOG299566
OMA:IVESEYA OrthoDB:EOG4NZTT6 Uniprot:B7ZVN7
Length = 604
Score = 245 (91.3 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 95/339 (28%), Positives = 153/339 (45%)
Query: 62 DLCACDLPHTLRCTANKSDLYAISESLRGLE--PD---ERVSLLDCTLSNVTVLPGKFLE 116
+L A DLP RC+ ++ L ++ S R L P+ LD + + + L +
Sbjct: 21 NLSAADLPCPQRCSCSRDPL-EVNCSSRHLTAVPEGLPTNAKRLDLSGNQLKTLARRQFS 79
Query: 117 GVT-LHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDL 175
++ L L +S + I F GL + L+ L + NN L ++P + L+ NL RLD+
Sbjct: 80 SLSKLEDLDLSENIISMIEVETFQGLKN-LRYLRIKNNRLKILPVGVFSGLS-NLRRLDI 137
Query: 176 SHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAA 235
S N++ + +F+ + +L LD N L+ +SQ L L+ L + + LT A
Sbjct: 138 SENEILVFLDYTFRDMINLQQLDAGENDLVFISQRAFVGLQALKELNVDRSNLTSIPTEA 197
Query: 236 LQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAH-NQFSSVRRGALAGLDKLTSL 294
L L+S+T L L L L + RL L+ L I H + + +L GL+ LT+L
Sbjct: 198 LSQLQSLTKLRL-RKLTISVLPNNAFRRLHQLRTLQILHWSSLEMLNSNSLVGLN-LTTL 255
Query: 295 SCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQ 354
+ + + R L+ L +LDL++N I ++ G L L L L L L +
Sbjct: 256 VLTNCNLSAIPYSPLRHLAYLQYLDLSYNPITSIQGNLLGDLLRLQELHLVGGNLLQIEP 315
Query: 355 DLITPLKSLQELRLDDNDISMEPECIY--VGFNTMDLEL 391
L + L + N +S E + VG N L L
Sbjct: 316 GAFRGLSRFRLLNVSSNRLSTLEESAFHSVG-NLQTLRL 353
Score = 156 (60.0 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 85/350 (24%), Positives = 150/350 (42%)
Query: 86 ESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVT-LHGLVISSGELKNISDGAFIGLSSP 144
E+ +GL+ + L + + +LP G++ L L IS E+ D F + +
Sbjct: 100 ETFQGLK---NLRYLRIKNNRLKILPVGVFSGLSNLRRLDISENEILVFLDYTFRDMIN- 155
Query: 145 LQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKL 204
LQ L N L + A L L L++ + L + + L SL L L +
Sbjct: 156 LQQLDAGENDLVFISQRAFVGLQA-LKELNVDRSNLTSIPTEALSQLQSLTKLRLRKLTI 214
Query: 205 MTLSQDCLAPLVTLRVLR-LQGNRLTVSVVAALQGLRSVTDLDLSH-NLLAGPLGPSTVP 262
L + L LR L+ L + L + +L GL ++T L L++ NL A P P +
Sbjct: 215 SVLPNNAFRRLHQLRTLQILHWSSLEMLNSNSLVGL-NLTTLVLTNCNLSAIPYSP--LR 271
Query: 263 RLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 322
L+ L+ L +++N +S++ L L +L L + +E +FR LS L+++
Sbjct: 272 HLAYLQYLDLSYNPITSIQGNLLGDLLRLQELHLVGGNLLQIEPGAFRGLSRFRLLNVSS 331
Query: 323 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYV 382
NR+ + ++ + NL TL L N L A L+ ++ + L D +P C +
Sbjct: 332 NRLSTLEESAFHSVGNLQTLRLDRNPL-ACDCRLLWVMRRRRRLDFDGR----QPTCSPL 386
Query: 383 GFNTMDLELIYSGVWRHSTLLIPVMLSLCTRSSVVTRYRYCVVLIEGSNI 432
S +PV+ + C ++ ++ R + +IEG +
Sbjct: 387 NHQRKAFR-------DFSEAELPVVFT-CRQAQILNRQLQDISVIEGMRV 428
Score = 125 (49.1 bits), Expect = 0.00024, P = 0.00024
Identities = 55/211 (26%), Positives = 103/211 (48%)
Query: 67 DLPHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGV-TLHGLVI 125
D+ + + A ++DL IS+ R + + L+ SN+T +P + L + +L L +
Sbjct: 152 DMINLQQLDAGENDLVFISQ--RAFVGLQALKELNVDRSNLTSIPTEALSQLQSLTKLRL 209
Query: 126 SSGELKNISDGAFIGLSSPLQALGLPN-NLLSVVPTSALAPLAPNLDRLDLSHNQLYKLE 184
+ + + AF L L+ L + + + L ++ +++L L NL L L++ L +
Sbjct: 210 RKLTISVLPNNAFRRLHQ-LRTLQILHWSSLEMLNSNSLVGL--NLTTLVLTNCNLSAIP 266
Query: 185 NTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTD 244
+ + L+ L +LDLSYN + ++ + L L+ L+ L L G L A +GL
Sbjct: 267 YSPLRHLAYLQYLDLSYNPITSIQGNLLGDLLRLQELHLVGGNLLQIEPGAFRGLSRFRL 326
Query: 245 LDLSHNLLAGPLGPSTVPRLSSLKVLSIAHN 275
L++S N L+ L S + +L+ L + N
Sbjct: 327 LNVSSNRLS-TLEESAFHSVGNLQTLRLDRN 356
>WB|WBGene00022129 [details] [associations]
symbol:lron-11 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 SMART:SM00013 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00700000104286 HSSP:P07359 EMBL:FO081276
EMBL:AF304125 RefSeq:NP_491035.1 UniGene:Cel.7069
ProteinModelPortal:G5EGE7 SMR:G5EGE7 EnsemblMetazoa:Y71F9B.8
GeneID:171837 KEGG:cel:CELE_Y71F9B.8 CTD:171837 WormBase:Y71F9B.8
OMA:AFVDNIN NextBio:872913 Uniprot:G5EGE7
Length = 542
Score = 244 (91.0 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 85/306 (27%), Positives = 148/306 (48%)
Query: 69 PHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGK-FLEGVTLHGLVISS 127
P+ + + + + +S + P RV LD + +++ LP + F + L L+ISS
Sbjct: 70 PNLEQLILHNNSITHLSADVFSTLPSLRV--LDLSSNSLLSLPNEVFSKLKNLKTLIISS 127
Query: 128 GELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTS 187
+++ + F GLS LQ L + +N LS +P S L PL+ L LDLS N+L + +
Sbjct: 128 NDVQ-LGPECFAGLSQ-LQTLSIADNRLSFLPPSVLKPLS-GLRNLDLSANKLLSMPASV 184
Query: 188 FKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDL 247
L L L L N L +L L+ L + N + AL GL + L+L
Sbjct: 185 MNNLGGLETLKLKQNLLSSLETGMFLSQKELKHLDVSENLIGDIEEGALYGLEKLETLNL 244
Query: 248 SHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQ-IDVLED 306
++N L P L +LK L ++ N F S+ + GL L L+ H++ + ++
Sbjct: 245 TNNQLVRL--PGNTWSLPALKTLDLSSNLFVSLETASFDGLPALQYLNISHSRNLKTIQM 302
Query: 307 HSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQEL 366
+F LS+L L ++ + + + ++ + L+ LDLS+N LR + ++ +++ L
Sbjct: 303 ATFVQLSSLHWLSISSSALTHIHPSAFNPIPPLSHLDLSNNELRYVAPGMLQ-WPNIRNL 361
Query: 367 RLDDND 372
L +ND
Sbjct: 362 HLANND 367
Score = 225 (84.3 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 72/230 (31%), Positives = 114/230 (49%)
Query: 148 LGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTL 207
L L NN +S + L+ L PNL++L L +N + L F L SL LDLS N L++L
Sbjct: 51 LDLSNNRISRLSADELS-LYPNLEQLILHNNSITHLSADVFSTLPSLRVLDLSSNSLLSL 109
Query: 208 SQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSL 267
+ + L L+ L + N + + GL + L ++ N L+ L PS + LS L
Sbjct: 110 PNEVFSKLKNLKTLIISSNDVQLGP-ECFAGLSQLQTLSIADNRLSF-LPPSVLKPLSGL 167
Query: 268 KVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVA 327
+ L ++ N+ S+ + L L +L N + LE F + L HLD++ N I
Sbjct: 168 RNLDLSANKLLSMPASVMNNLGGLETLKLKQNLLSSLETGMFLSQKELKHLDVSENLIGD 227
Query: 328 VSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN-DISME 376
+ +L L L TL+L++N L L + + L +L+ L L N +S+E
Sbjct: 228 IEEGALYGLEKLETLNLTNNQLVRLPGNTWS-LPALKTLDLSSNLFVSLE 276
Score = 211 (79.3 bits), Expect = 8.1e-14, P = 8.1e-14
Identities = 72/256 (28%), Positives = 123/256 (48%)
Query: 119 TLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHN 178
+L L +SS L ++ + F L + L+ L + +N + + P A L+ L L ++ N
Sbjct: 95 SLRVLDLSSNSLLSLPNEVFSKLKN-LKTLIISSNDVQLGP-ECFAGLS-QLQTLSIADN 151
Query: 179 QLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQG 238
+L L + K LS L LDLS NKL+++ + L L L+L+ N L+
Sbjct: 152 RLSFLPPSVLKPLSGLRNLDLSANKLLSMPASVMNNLGGLETLKLKQNLLSSLETGMFLS 211
Query: 239 LRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHH 298
+ + LD+S NL+ G + + L L+ L++ +NQ + G L L +L
Sbjct: 212 QKELKHLDVSENLI-GDIEEGALYGLEKLETLNLTNNQLVRLP-GNTWSLPALKTLDLSS 269
Query: 299 NQIDVLEDHSFRALSTLSHLDLAHNR-IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLI 357
N LE SF L L +L+++H+R + + A+ LS+L L +S + L +
Sbjct: 270 NLFVSLETASFDGLPALQYLNISHSRNLKTIQMATFVQLSSLHWLSISSSALTHIHPSAF 329
Query: 358 TPLKSLQELRLDDNDI 373
P+ L L L +N++
Sbjct: 330 NPIPPLSHLDLSNNEL 345
Score = 189 (71.6 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 67/224 (29%), Positives = 108/224 (48%)
Query: 197 LDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPL 256
LDLS N++ LS D L+ L L L N +T L S+ LDLS N L L
Sbjct: 51 LDLSNNRISRLSADELSLYPNLEQLILHNNSITHLSADVFSTLPSLRVLDLSSNSLLS-L 109
Query: 257 GPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLS 316
+L +LK L I+ N + AGL +L +LS N++ L + LS L
Sbjct: 110 PNEVFSKLKNLKTLIISSNDVQ-LGPECFAGLSQLQTLSIADNRLSFLPPSVLKPLSGLR 168
Query: 317 HLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS-M 375
+LDL+ N+++++ + + +L L TL L N L +L + K L+ L + +N I +
Sbjct: 169 NLDLSANKLLSMPASVMNNLGGLETLKLKQNLLSSLETGMFLSQKELKHLDVSENLIGDI 228
Query: 376 EPECIYVGFNTMD-LELIYSGVWR--HSTLLIPVMLSLCTRSSV 416
E +Y G ++ L L + + R +T +P + +L S++
Sbjct: 229 EEGALY-GLEKLETLNLTNNQLVRLPGNTWSLPALKTLDLSSNL 271
Score = 123 (48.4 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 37/124 (29%), Positives = 59/124 (47%)
Query: 269 VLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAV 328
VL +++N+ S + L+ L L H+N I L F L +L LDL+ N ++++
Sbjct: 50 VLDLSNNRISRLSADELSLYPNLEQLILHNNSITHLSADVFSTLPSLRVLDLSSNSLLSL 109
Query: 329 SGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYV---GFN 385
+ L NL TL +S N ++ L + L LQ L + DN +S P + G
Sbjct: 110 PNEVFSKLKNLKTLIISSNDVQ-LGPECFAGLSQLQTLSIADNRLSFLPPSVLKPLSGLR 168
Query: 386 TMDL 389
+DL
Sbjct: 169 NLDL 172
Score = 120 (47.3 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 32/101 (31%), Positives = 51/101 (50%)
Query: 288 LD-KLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSH 346
LD + T L +N+I L L L L +N I +S + L +L LDLS
Sbjct: 44 LDPRTTVLDLSNNRISRLSADELSLYPNLEQLILHNNSITHLSADVFSTLPSLRVLDLSS 103
Query: 347 NFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTM 387
N L +L ++ + LK+L+ L + ND+ + PEC + G + +
Sbjct: 104 NSLLSLPNEVFSKLKNLKTLIISSNDVQLGPEC-FAGLSQL 143
Score = 74 (31.1 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 19/53 (35%), Positives = 31/53 (58%)
Query: 640 TTILLSS--LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFS 690
T + LS LK L ++ N + GAL GL+KL +L+ +NQ+ L +++S
Sbjct: 206 TGMFLSQKELKHLDVSENLIGDIEEGALYGLEKLETLNLTNNQLVRLPGNTWS 258
Score = 58 (25.5 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 19/56 (33%), Positives = 31/56 (55%)
Query: 628 NNSDSRYVK-LQ-ATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
N S SR +K +Q AT + LSSL LSI+ + + + A + L+ L +N++
Sbjct: 290 NISHSRNLKTIQMATFVQLSSLHWLSISSSALTHIHPSAFNPIPPLSHLDLSNNEL 345
Score = 50 (22.7 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
LS L+ LSIA N+ S + L L L +L N++
Sbjct: 140 LSQLQTLSIADNRLSFLPPSVLKPLSGLRNLDLSANKL 177
>RGD|1562655 [details] [associations]
symbol:Tlr13 "toll-like receptor 13" species:10116 "Rattus
norvegicus" [GO:0002237 "response to molecule of bacterial origin"
evidence=IEA] [GO:0002755 "MyD88-dependent toll-like receptor
signaling pathway" evidence=IEA;ISO] [GO:0004888 "transmembrane
signaling receptor activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005768 "endosome" evidence=ISO] [GO:0009615
"response to virus" evidence=ISO] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA;ISO] [GO:0034178 "toll-like receptor 13 signaling
pathway" evidence=IEA;ISO] [GO:0042803 "protein homodimerization
activity" evidence=ISO] [GO:0043408 "regulation of MAPK cascade"
evidence=ISO] [GO:0045087 "innate immune response"
evidence=IEA;ISO] Pfam:PF00560 InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR027196 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 RGD:1562655 GO:GO:0007165
InterPro:IPR003591 SMART:SM00369 GO:GO:0005622 SUPFAM:SSF52200
PANTHER:PTHR24367:SF26 IPI:IPI00362009 Ensembl:ENSRNOT00000038868
Uniprot:F1LYZ1
Length = 987
Score = 216 (81.1 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 77/235 (32%), Positives = 122/235 (51%)
Query: 119 TLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHN 178
T H L +++ ++ + +F LS+ L L L NL+ + A L NL L+L N
Sbjct: 101 TTH-LNLTNNYIQVLPPWSFTNLSA-LVDLRLEWNLIWKIDEGAFRGLE-NLTLLNLVEN 157
Query: 179 QLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLT--VSVVAAL 236
++ + N SF+GLS+L L LS+N++ + +D PLV L+ L L NR++ ++ A+
Sbjct: 158 KIQSVNN-SFEGLSNLETLLLSHNQITHIHKDAFTPLVKLKYLSLSRNRISNFSGILEAV 216
Query: 237 QGLRSVTDLDLSHNLLAGPLGPSTVPR-LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLS 295
Q L + LDL +N + L S PR L SL LS N + + L+ L LT+LS
Sbjct: 217 QHLPCLEHLDLINNSIMY-LDHS--PRSLVSLTHLSFEGNNLTELNFSTLS-LPNLTNLS 272
Query: 296 CHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLR 350
N V++D + L L L+L+ +V + S HL N+ +DLS+ L+
Sbjct: 273 ASQNGHGVIQDVYLKTLPQLQSLNLS-GTVVKLEMLSAKHLQNVRVMDLSNRELK 326
Score = 209 (78.6 bits), Expect = 3.7e-13, P = 3.7e-13
Identities = 92/312 (29%), Positives = 143/312 (45%)
Query: 79 SDLYAISES-LRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGA 137
SDL +++S L +R++L C LS ++ L+ +T+ L +S + K+ D A
Sbjct: 378 SDLVHLNDSEFNALPSLQRLNLNKCQLSFISNKTWSSLQNLTI--LDLSHNKFKSFPDFA 435
Query: 138 FIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFL 197
F L L+ L L N ++ + A + L +L L+L+ + ++ SF +L L
Sbjct: 436 FSPLKR-LEFLSLSRNPITELNNLAFSGLF-SLKELNLAACWIVTIDRYSFTQFPNLEVL 493
Query: 198 DLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLG 257
DL N + TL+ PL L L L NRL + A GL + LDL +N L+
Sbjct: 494 DLGDNNIRTLNHGTFQPLKKLHTLILSHNRLEIMESNAFSGLTGLRYLDLMYNSLSY-FH 552
Query: 258 PSTVPRLSSLKVLSIAHNQ--FSSVRRGALAGLDKLTSLSC-----HHNQIDVLEDHSFR 310
L L VL + N+ + + R KL SL + I V+ + F+
Sbjct: 553 KHHFMGLEKLLVLKLGFNKITYETTRTLQYPPFMKLKSLKQLNLEGQKHGIQVVPRNFFQ 612
Query: 311 ALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLS--HNFLRAL--TQDLITPLKSLQEL 366
LS+L L L N V + L NLT LD+S + R+L L LK L+ L
Sbjct: 613 GLSSLQELLLGKNPSVFLDHHQFDPLINLTKLDISGTKDGDRSLYLNSSLFQNLKRLKVL 672
Query: 367 RLDDNDI-SMEP 377
RL++N++ S+ P
Sbjct: 673 RLENNNLESLVP 684
Score = 179 (68.1 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 80/286 (27%), Positives = 122/286 (42%)
Query: 93 PDERVSLLDCTLSNVTVLPGKFLEGV-TLHGLVISSGELKNISDGAFIGLSSPLQALGLP 151
P +R+ L + + +T L G+ +L L +++ + I +F + L+ L L
Sbjct: 438 PLKRLEFLSLSRNPITELNNLAFSGLFSLKELNLAACWIVTIDRYSFTQFPN-LEVLDLG 496
Query: 152 NNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDC 211
+N + + PL L L LSHN+L +E+ +F GL+ L +LDL YN L +
Sbjct: 497 DNNIRTLNHGTFQPLK-KLHTLILSHNRLEIMESNAFSGLTGLRYLDLMYNSLSYFHKHH 555
Query: 212 LAPLVTLRVLRLQGNRLTVSVVAALQ-----GLRSVTDLDLSHNLLAGPLGPSTVPR--- 263
L L VL+L N++T LQ L+S+ L NL G VPR
Sbjct: 556 FMGLEKLLVLKLGFNKITYETTRTLQYPPFMKLKSLKQL----NLEGQKHGIQVVPRNFF 611
Query: 264 --LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID----VLEDHSFRALSTLSH 317
LSSL+ L + N + L LT L + L F+ L L
Sbjct: 612 QGLSSLQELLLGKNPSVFLDHHQFDPLINLTKLDISGTKDGDRSLYLNSSLFQNLKRLKV 671
Query: 318 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSL 363
L L +N + ++ + L NL L N L+ + Q + LKSL
Sbjct: 672 LRLENNNLESLVPGMFSSLQNLQVFSLRFNNLKVINQSHLENLKSL 717
Score = 176 (67.0 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 91/326 (27%), Positives = 143/326 (43%)
Query: 84 ISESLRGLE--PDERVSLLDCTL--SNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFI 139
I+ S+ L+ P VSL + +N+T L L L L S I D ++
Sbjct: 228 INNSIMYLDHSPRSLVSLTHLSFEGNNLTELNFSTLSLPNLTNLSASQNGHGVIQD-VYL 286
Query: 140 GLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKG----LSSLN 195
LQ+L L ++ + SA N+ +DLS+ +L K + + K L +L
Sbjct: 287 KTLPQLQSLNLSGTVVKLEMLSAKH--LQNVRVMDLSNREL-KHGHLNMKIVCYLLRNLP 343
Query: 196 FLD-LSYNKLMTLSQDC--LAPLVTLRVLRLQGNRLTVSVV-AALQGLRSVTDLDLSHNL 251
L+ L ++K T ++ LA L L L N V + + L S+ L+L+
Sbjct: 344 MLEILFFHKNATNAEGIKQLAKCTRLLFLDLGQNSDLVHLNDSEFNALPSLQRLNLNKCQ 403
Query: 252 LAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRA 311
L+ + T L +L +L ++HN+F S A + L +L LS N I L + +F
Sbjct: 404 LSF-ISNKTWSSLQNLTILDLSHNKFKSFPDFAFSPLKRLEFLSLSRNPITELNNLAFSG 462
Query: 312 LSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
L +L L+LA IV + S NL LDL N +R L PLK L L L N
Sbjct: 463 LFSLKELNLAACWIVTIDRYSFTQFPNLEVLDLGDNNIRTLNHGTFQPLKKLHTLILSHN 522
Query: 372 DISMEPECIYVGFNTMD-LELIYSGV 396
+ + + G + L+L+Y+ +
Sbjct: 523 RLEIMESNAFSGLTGLRYLDLMYNSL 548
Score = 157 (60.3 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 63/221 (28%), Positives = 101/221 (45%)
Query: 194 LNFLDLSYNK-LMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLL 252
L FLDL N L+ L+ L +L+ L L +L+ L+++T LDLSHN
Sbjct: 369 LLFLDLGQNSDLVHLNDSEFNALPSLQRLNLNKCQLSFISNKTWSSLQNLTILDLSHNKF 428
Query: 253 AGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRAL 312
+ P L L+ LS++ N + + A +GL L L+ I ++ +SF
Sbjct: 429 KSFPDFAFSP-LKRLEFLSLSRNPITELNNLAFSGLFSLKELNLAACWIVTIDRYSFTQF 487
Query: 313 STLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDND 372
L LDL N I ++ + L L TL LSHN L + + + L L+ L L N
Sbjct: 488 PNLEVLDLGDNNIRTLNHGTFQPLKKLHTLILSHNRLEIMESNAFSGLTGLRYLDLMYNS 547
Query: 373 ISMEPECIYVGFNTM-DLELIYSGVWRHST--LLIPVMLSL 410
+S + ++G + L+L ++ + +T L P + L
Sbjct: 548 LSYFHKHHFMGLEKLLVLKLGFNKITYETTRTLQYPPFMKL 588
Score = 140 (54.3 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 40/116 (34%), Positives = 61/116 (52%)
Query: 259 STVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHL 318
S +PR ++ L++ +N + + L L L N I +++ +FR L L+ L
Sbjct: 95 SDIPRYTTH--LNLTNNYIQVLPPWSFTNLSALVDLRLEWNLIWKIDEGAFRGLENLTLL 152
Query: 319 DLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 374
+L N+I +V+ S LSNL TL LSHN + + +D TPL L+ L L N IS
Sbjct: 153 NLVENKIQSVNN-SFEGLSNLETLLLSHNQITHIHKDAFTPLVKLKYLSLSRNRIS 207
Score = 83 (34.3 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 15/49 (30%), Positives = 29/49 (59%)
Query: 646 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNVIG 694
+L+VL + N ++ G L KL +L HN+++++E ++FS + G
Sbjct: 489 NLEVLDLGDNNIRTLNHGTFQPLKKLHTLILSHNRLEIMESNAFSGLTG 537
Score = 73 (30.8 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 20/68 (29%), Positives = 33/68 (48%)
Query: 625 INRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL 684
+N N ++ T L +L +L ++HN+F S A + L +L LS N I L
Sbjct: 397 LNLNKCQLSFIS-NKTWSSLQNLTILDLSHNKFKSFPDFAFSPLKRLEFLSLSRNPITEL 455
Query: 685 EDHSFSNV 692
+ +FS +
Sbjct: 456 NNLAFSGL 463
Score = 66 (28.3 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 22/86 (25%), Positives = 35/86 (40%)
Query: 609 IHHHACFIPVAQQED-DINRNNSDSRYVKLQATTIL-LSSLKVLSIAHNQFSSVRRGALA 666
+ HH F P+ DI+ R + L ++ L LKVL + +N S+ G +
Sbjct: 630 LDHHQ-FDPLINLTKLDISGTKDGDRSLYLNSSLFQNLKRLKVLRLENNNLESLVPGMFS 688
Query: 667 GLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L S N + V+ N+
Sbjct: 689 SLQNLQVFSLRFNNLKVINQSHLENL 714
Score = 60 (26.2 bits), Expect = 4.8e-15, Sum P(2) = 4.8e-15
Identities = 13/46 (28%), Positives = 20/46 (43%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
L L L ++HN+ + A +GL L L +N + H F
Sbjct: 511 LKKLHTLILSHNRLEIMESNAFSGLTGLRYLDLMYNSLSYFHKHHF 556
Score = 58 (25.5 bits), Expect = 7.7e-15, Sum P(2) = 7.7e-15
Identities = 20/76 (26%), Positives = 33/76 (43%)
Query: 615 FIPVAQQEDDINRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSL 674
F+ + Q D ++ N+S+ L SL+ L++ Q S + + L LT L
Sbjct: 371 FLDLGQNSDLVHLNDSEFN---------ALPSLQRLNLNKCQLSFISNKTWSSLQNLTIL 421
Query: 675 SCHHNQIDVLEDHSFS 690
HN+ D +FS
Sbjct: 422 DLSHNKFKSFPDFAFS 437
Score = 50 (22.7 bits), Expect = 5.2e-14, Sum P(2) = 5.2e-14
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
L+ L+ L + +N S + GL+KL L N+I
Sbjct: 535 LTGLRYLDLMYNSLSYFHKHHFMGLEKLLVLKLGFNKI 572
Score = 47 (21.6 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 13/47 (27%), Positives = 24/47 (51%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFS 690
L L+ LS++ N + + A +GL L L+ I ++ +SF+
Sbjct: 439 LKRLEFLSLSRNPITELNNLAFSGLFSLKELNLAACWIVTIDRYSFT 485
Score = 43 (20.2 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 16/52 (30%), Positives = 21/52 (40%)
Query: 644 LSSLKVLSIAHNQ--FSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNVI 693
L SLK L++ + V R GL L L N L+ H F +I
Sbjct: 588 LKSLKQLNLEGQKHGIQVVPRNFFQGLSSLQELLLGKNPSVFLDHHQFDPLI 639
>MGI|MGI:1914394 [details] [associations]
symbol:Lrrc40 "leucine rich repeat containing 40"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1914394 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00700000104287 CTD:55631 HOGENOM:HOG000005761
HOVERGEN:HBG081930 OrthoDB:EOG4M65HK InterPro:IPR015766
PANTHER:PTHR23155:SF28 EMBL:AK011726 EMBL:AK017814 EMBL:AK034978
EMBL:AK163288 IPI:IPI00470138 RefSeq:NP_077156.2 UniGene:Mm.358704
ProteinModelPortal:Q9CRC8 SMR:Q9CRC8 STRING:Q9CRC8
PhosphoSite:Q9CRC8 PaxDb:Q9CRC8 PRIDE:Q9CRC8
Ensembl:ENSMUST00000072080 GeneID:67144 KEGG:mmu:67144
UCSC:uc008rvu.1 InParanoid:Q9CRC8 NextBio:323714 Bgee:Q9CRC8
CleanEx:MM_LRRC40 Genevestigator:Q9CRC8
GermOnline:ENSMUSG00000063052 Uniprot:Q9CRC8
Length = 602
Score = 241 (89.9 bits), Expect = 2.2e-17, Sum P(2) = 2.2e-17
Identities = 84/255 (32%), Positives = 130/255 (50%)
Query: 123 LVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYK 182
L+ISS +L+++SD + L L L + +N L+ +P SA+ L NL +L++SHN+L K
Sbjct: 87 LIISSNKLQSLSDD--LRLLPALTVLDIHDNQLTSLP-SAIREL-DNLQKLNVSHNKL-K 141
Query: 183 LENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSV 242
+ L +L L L +N+L + + L L L L NRL +V A L S+
Sbjct: 142 ILPEEITSLKNLRTLHLQHNELTCIPEG-FEHLSCLEDLDLSSNRLA-TVPADFALLSSL 199
Query: 243 TDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID 302
L+LS N L P+ + R+ LK L N +V + ++ L L N++
Sbjct: 200 LRLNLSSNQLKNL--PAEISRMKRLKHLDCDANLLETVPPD-VGSMESLELLYLRRNKLR 256
Query: 303 VLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKS 362
VL + F + L L LA N+I + L HL + LDL N LR++ +++ L+S
Sbjct: 257 VLPE--FPSCRQLKELHLAENQIEKLGAEHLQHLQAILVLDLRGNKLRSVPEEMAL-LQS 313
Query: 363 LQELRLDDNDISMEP 377
L+ L L +NDIS P
Sbjct: 314 LERLDLSNNDISSLP 328
Score = 175 (66.7 bits), Expect = 4.5e-10, Sum P(2) = 4.5e-10
Identities = 57/187 (30%), Positives = 97/187 (51%)
Query: 192 SSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNL 251
+ L L +S NKL +LS D L L L VL + N+LT S+ +A++ L ++ L++SHN
Sbjct: 82 TDLTKLIISSNKLQSLSDD-LRLLPALTVLDIHDNQLT-SLPSAIRELDNLQKLNVSHNK 139
Query: 252 LAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRA 311
L + P + L +L+ L + HN+ + + G L L L N++ + F
Sbjct: 140 LK--ILPEEITSLKNLRTLHLQHNELTCIPEG-FEHLSCLEDLDLSSNRLATVPA-DFAL 195
Query: 312 LSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
LS+L L+L+ N++ + A ++ + L LD N L + D + ++SL+ L L N
Sbjct: 196 LSSLLRLNLSSNQLKNLP-AEISRMKRLKHLDCDANLLETVPPD-VGSMESLELLYLRRN 253
Query: 372 DISMEPE 378
+ + PE
Sbjct: 254 KLRVLPE 260
Score = 167 (63.8 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 87/292 (29%), Positives = 141/292 (48%)
Query: 75 TANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNIS 134
++NK L ++S+ LR L P +++LD + +T LP E L L +S +LK +
Sbjct: 90 SSNK--LQSLSDDLR-LLP--ALTVLDIHDNQLTSLPSAIRELDNLQKLNVSHNKLKILP 144
Query: 135 DGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSL 194
+ L + L+ L L +N L+ +P L+ L+ LDLS N+L + F LSSL
Sbjct: 145 E-EITSLKN-LRTLHLQHNELTCIP-EGFEHLSC-LEDLDLSSNRLATVP-ADFALLSSL 199
Query: 195 NFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAG 254
L+LS N+L L + ++ + L+ L N L +V + + S+ L L N L
Sbjct: 200 LRLNLSSNQLKNLPAE-ISRMKRLKHLDCDANLLE-TVPPDVGSMESLELLYLRRNKLR- 256
Query: 255 PLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALST 314
+ P P LK L +A NQ + L L + L N++ + + L +
Sbjct: 257 -VLPE-FPSCRQLKELHLAENQIEKLGAEHLQHLQAILVLDLRGNKLRSVPEE-MALLQS 313
Query: 315 LSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQEL 366
L LDL++N I ++ SL +L +L L L N LR + +++I K QE+
Sbjct: 314 LERLDLSNNDISSLP-CSLGNL-HLKFLALEGNPLRTIRREIIA--KGTQEV 361
Score = 141 (54.7 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 68/223 (30%), Positives = 104/223 (46%)
Query: 68 LPHTLRCTANKSDLYAISESLRGL-EPDERVSLL-DCTLSN--VTVLPGKFLEGVTLHGL 123
LP + N L+ L + E E +S L D LS+ + +P F +L L
Sbjct: 143 LPEEITSLKNLRTLHLQHNELTCIPEGFEHLSCLEDLDLSSNRLATVPADFALLSSLLRL 202
Query: 124 VISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKL 183
+SS +LKN+ A I L+ L NLL VP + +L+ L L N+L L
Sbjct: 203 NLSSNQLKNLP--AEISRMKRLKHLDCDANLLETVPPDVGS--MESLELLYLRRNKLRVL 258
Query: 184 ENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVT 243
F L L L+ N++ L + L L + VL L+GN+L SV + L+S+
Sbjct: 259 PE--FPSCRQLKELHLAENQIEKLGAEHLQHLQAILVLDLRGNKLR-SVPEEMALLQSLE 315
Query: 244 DLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALA 286
LDLS+N ++ P ++ L LK L++ N ++RR +A
Sbjct: 316 RLDLSNNDISSL--PCSLGNLH-LKFLALEGNPLRTIRREIIA 355
Score = 141 (54.7 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 75/300 (25%), Positives = 133/300 (44%)
Query: 95 ERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNL 154
E + LL + + VLP +F L L ++ +++ + L + L L L N
Sbjct: 243 ESLELLYLRRNKLRVLP-EFPSCRQLKELHLAENQIEKLGAEHLQHLQAIL-VLDLRGNK 300
Query: 155 LSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAP 214
L VP +A L +L+RLDLS+N + L S L L FL L N L T+ ++ +A
Sbjct: 301 LRSVPEE-MA-LLQSLERLDLSNNDISSLP-CSLGNLH-LKFLALEGNPLRTIRREIIAK 356
Query: 215 LVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAH 274
T VL+ +++ + T + L + +++LK+L +
Sbjct: 357 -GTQEVLKYLRSKIKDDRTNQNDSVPE-TAMTLPSEARVN------IHAIATLKLLDYSD 408
Query: 275 NQFSSVRRGALAGLDK--LTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGAS 332
Q + + +TS++ NQ+ + + ++L+ N++ +S
Sbjct: 409 KQATLIPDDLFDATKTTLITSINFSKNQLCEIPQRIVELKEMVLDINLSFNKLSFISH-E 467
Query: 333 LAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELI 392
L L LT LDL +NFL +L +++ + L LQ + L N + PE +Y +T++ LI
Sbjct: 468 LCLLQKLTFLDLRNNFLSSLPEEM-SSLTKLQTINLSFNRFKVFPEVLY-RISTLEAVLI 525
Score = 49 (22.3 bits), Expect = 2.2e-17, Sum P(2) = 2.2e-17
Identities = 13/54 (24%), Positives = 27/54 (50%)
Query: 628 NNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
N S +R+ +S+L+ + I++NQ SV + ++ L +L +N +
Sbjct: 501 NLSFNRFKVFPEVLYRISTLEAVLISNNQVGSVDPQKMKLMENLNTLDLQNNDL 554
>ZFIN|ZDB-GENE-010306-3 [details] [associations]
symbol:slit2 "slit (Drosophila) homolog 2"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IMP] [GO:0033564
"anterior/posterior axon guidance" evidence=IMP] [GO:0007414
"axonal defasciculation" evidence=IMP] [GO:0001763 "morphogenesis
of a branching structure" evidence=IMP] [GO:0003262 "endocardial
progenitor cell migration to the midline involved in heart field
formation" evidence=IGI] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0030517 "negative regulation of axon extension"
evidence=IGI;IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152
ZFIN:ZDB-GENE-010306-3 GO:GO:0005576 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0030517 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 HSSP:P00740 Pfam:PF12661 GO:GO:0001763
GO:GO:0007414 Pfam:PF01463 GO:GO:0033564 HOGENOM:HOG000116120
HOVERGEN:HBG057959 CTD:9353 KO:K06839 OrthoDB:EOG4D7Z4T
GO:GO:0003262 EMBL:AF210321 EMBL:CU638813 IPI:IPI00491594
RefSeq:NP_571810.1 UniGene:Dr.10489 SMR:Q9DE36 IntAct:Q9DE36
GeneID:80353 KEGG:dre:80353 NextBio:20934061 Uniprot:Q9DE36
Length = 1512
Score = 182 (69.1 bits), Expect = 7.8e-12, Sum P(2) = 7.8e-12
Identities = 71/231 (30%), Positives = 109/231 (47%)
Query: 197 LDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPL 256
LDL+ N L +++ A L LRVL+L N+++ A Q L+ + L L+ N L +
Sbjct: 53 LDLNANNLTKITKADFAGLKNLRVLQLMENKISSIERGAFQDLQELERLRLNRNNLQ--V 110
Query: 257 GPSTVPRLSSLKV--LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALST 314
P + L + K+ L ++ NQ + R A G ++ +L +NQI +ED +FRAL
Sbjct: 111 LPELL-FLGTTKLFRLDLSENQIQGIPRKAFRGSTEIKNLQLDYNQISCIEDGAFRALGD 169
Query: 315 LSHLDLAHNRIVAVSGASLAHLSNLTTLDL-SHNFLRALTQDLITPLKSLQELRLDDNDI 373
L L L +N I +S AS H+ L T L S+N L ++ Q RL
Sbjct: 170 LEVLTLNNNNISRLSVASFNHMPKLRTFRLHSNNLLCDCNVAWLSDWLR-QRPRLGLYTQ 228
Query: 374 SMEPECIYVGFNTMDL---ELIYSGVWRHSTLLIPVMLSLCTRSSVVTRYR 421
M P + G N ++ E + +G HS+ + LCT S+ V R
Sbjct: 229 CMAPPSLR-GHNIAEVQKKEFMCTGPQSHSSCSVLQCPELCTCSNNVVDCR 278
Score = 181 (68.8 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 81/335 (24%), Positives = 146/335 (43%)
Query: 67 DLPHTL-RCTANKSDLYAISES-LRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLV 124
++P + R N ++L I+++ GL+ + L++ +S++ G F + L L
Sbjct: 45 NIPRNVERLDLNANNLTKITKADFAGLKNLRVLQLMENKISSIE--RGAFQDLQELERLR 102
Query: 125 ISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLE 184
++ L+ + + F+G ++ L L L N + +P A + + L L +NQ+ +E
Sbjct: 103 LNRNNLQVLPELLFLG-TTKLFRLDLSENQIQGIPRKAFRG-STEIKNLQLDYNQISCIE 160
Query: 185 NTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSV-VAALQG-LRSV 242
+ +F+ L L L L+ N + LS + LR RL N L VA L LR
Sbjct: 161 DGAFRALGDLEVLTLNNNNISRLSVASFNHMPKLRTFRLHSNNLLCDCNVAWLSDWLRQR 220
Query: 243 TDLDLSHNLLAGP-LGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 301
L L +A P L + + + + SS ++ +L + C +N +
Sbjct: 221 PRLGLYTQCMAPPSLRGHNIAEVQKKEFMCTGPQSHSSC---SVLQCPELCT--CSNNVV 275
Query: 302 DV----LEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLI 357
D L + T++ + L N I + + A L +DLS+N + L D
Sbjct: 276 DCRGKGLTEIPTNLPETITEIRLEQNSIKIIPAGAFAPYKRLRRIDLSNNQITELASDSF 335
Query: 358 TPLKSLQELRLDDNDISMEPECIYVGFNTMDLELI 392
L+SL L L N I+ P+ ++ G ++ L L+
Sbjct: 336 QGLRSLNSLVLYGNKITELPKGLFDGLFSLQLLLL 370
Score = 172 (65.6 bits), Expect = 9.2e-11, Sum P(2) = 9.2e-11
Identities = 82/336 (24%), Positives = 136/336 (40%)
Query: 69 PHTLRCTANKSDLYAISESLRGLEPD--ERVSLLDCTLSNVTVLPGKFLEGV-TLHGLVI 125
P C+ D + +SLR + + V LD +N+T + G+ L L +
Sbjct: 22 PSQCSCSGTAVDCHG--QSLRSVPRNIPRNVERLDLNANNLTKITKADFAGLKNLRVLQL 79
Query: 126 SSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLEN 185
++ +I GAF L L+ L L N L V+P L L RLDLS NQ+ +
Sbjct: 80 MENKISSIERGAFQDLQE-LERLRLNRNNLQVLP-ELLFLGTTKLFRLDLSENQIQGIPR 137
Query: 186 TSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDL 245
+F+G + + L L YN++ + L L VL L N ++ VA+ + +
Sbjct: 138 KAFRGSTEIKNLQLDYNQISCIEDGAFRALGDLEVLTLNNNNISRLSVASFNHMPKLRTF 197
Query: 246 DL-SHNLLAGPLGPSTVPRLSSLKVLSIAHNQFS--SVRRGALAGLDKLTSLSCHHNQID 302
L S+NLL L L + + S+R +A + K C Q
Sbjct: 198 RLHSNNLLCDCNVAWLSDWLRQRPRLGLYTQCMAPPSLRGHNIAEVQK-KEFMCTGPQ-- 254
Query: 303 VLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHL-SNL----TTLDLSHNFLRALTQDLI 357
HS ++ L N +V G L + +NL T + L N ++ +
Sbjct: 255 ---SHSSCSVLQCPELCTCSNNVVDCRGKGLTEIPTNLPETITEIRLEQNSIKIIPAGAF 311
Query: 358 TPLKSLQELRLDDNDISMEPECIYVGFNTMDLELIY 393
P K L+ + L +N I+ + G +++ ++Y
Sbjct: 312 APYKRLRRIDLSNNQITELASDSFQGLRSLNSLVLY 347
Score = 171 (65.3 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 76/299 (25%), Positives = 131/299 (43%)
Query: 84 ISESLRGLEPD-ERVSLLDCTLSNVTVLPGKFLEGVT-LHGLVISSGELKNISDGAFIGL 141
IS RG D + + L +N+ VLP G T L L +S +++ I AF G
Sbjct: 84 ISSIERGAFQDLQELERLRLNRNNLQVLPELLFLGTTKLFRLDLSENQIQGIPRKAFRG- 142
Query: 142 SSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSY 201
S+ ++ L L N +S + A L +L+ L L++N + +L SF + L L
Sbjct: 143 STEIKNLQLDYNQISCIEDGAFRALG-DLEVLTLNNNNISRLSVASFNHMPKLRTFRLHS 201
Query: 202 NKLMTLSQDCLAPLVT--LRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPS 259
N L+ DC ++ LR G +L+G ++ ++ + GP S
Sbjct: 202 NNLLC---DCNVAWLSDWLRQRPRLGLYTQCMAPPSLRG-HNIAEVQKKEFMCTGPQSHS 257
Query: 260 TVPRLSSLKVLSIAHNQFSSVRRGAL---AGL-DKLTSLSCHHNQIDVLEDHSFRALSTL 315
+ L ++ + ++N +G L + +T + N I ++ +F L
Sbjct: 258 SCSVLQCPELCTCSNNVVDCRGKGLTEIPTNLPETITEIRLEQNSIKIIPAGAFAPYKRL 317
Query: 316 SHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 374
+DL++N+I ++ S L +L +L L N + L + L L SLQ L L+ N I+
Sbjct: 318 RRIDLSNNQITELASDSFQGLRSLNSLVLYGNKITELPKGLFDGLFSLQLLLLNANKIN 376
Score = 170 (64.9 bits), Expect = 2.3e-17, Sum P(3) = 2.3e-17
Identities = 45/137 (32%), Positives = 72/137 (52%)
Query: 141 LSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLS 200
L + + L N + ++P A AP L R+DLS+NQ+ +L + SF+GL SLN L L
Sbjct: 289 LPETITEIRLEQNSIKIIPAGAFAPYK-RLRRIDLSNNQITELASDSFQGLRSLNSLVLY 347
Query: 201 YNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPST 260
NK+ L + L +L++L L N++ V + Q L+++ L L N L + T
Sbjct: 348 GNKITELPKGLFDGLFSLQLLLLNANKINCLRVDSFQDLQNLNLLSLYDNKLQ-TIAKGT 406
Query: 261 VPRLSSLKVLSIAHNQF 277
L +++ L +A N F
Sbjct: 407 FSSLRAIQTLHLAQNPF 423
Score = 155 (59.6 bits), Expect = 6.1e-09, Sum P(2) = 6.1e-09
Identities = 42/131 (32%), Positives = 68/131 (51%)
Query: 148 LGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTL 207
L L NN +V+ + + P L +++LS+N++ +E +F+G S +N L L+ N+L +
Sbjct: 521 LRLNNNEFTVLEATGIFKKLPQLRKINLSNNKITDIEEGTFEGASGVNELILTSNRLEGV 580
Query: 208 SQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSL 267
L L LR L L+ NR++ + GL SV L L NL+ + P L SL
Sbjct: 581 HYSMLKGLGGLRTLMLRSNRISCVNNGSFTGLSSVRLLSLYDNLITS-MSPGAFDTLHSL 639
Query: 268 KVLSIAHNQFS 278
L++ N F+
Sbjct: 640 STLNLLANPFN 650
Score = 139 (54.0 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 79/317 (24%), Positives = 132/317 (41%)
Query: 67 DLPHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVT-LHGLVI 125
DL R N+++L + E L ++ LD + + + +P K G T + L +
Sbjct: 94 DLQELERLRLNRNNLQVLPELL--FLGTTKLFRLDLSENQIQGIPRKAFRGSTEIKNLQL 151
Query: 126 SSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLEN 185
++ I DGAF L L+ L L NN +S + ++ + P L L N L L +
Sbjct: 152 DYNQISCIEDGAFRALGD-LEVLTLNNNNISRLSVASFNHM-PKLRTFRLHSNNL--LCD 207
Query: 186 TSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDL 245
+ LS L + L C+AP +LR + + + Q S + L
Sbjct: 208 CNVAWLSDW----LRQRPRLGLYTQCMAP-PSLRGHNIAEVQKKEFMCTGPQSHSSCSVL 262
Query: 246 DL------SHNLL-AGPLGPSTVP-RL-SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSC 296
S+N++ G + +P L ++ + + N + GA A +L +
Sbjct: 263 QCPELCTCSNNVVDCRGKGLTEIPTNLPETITEIRLEQNSIKIIPAGAFAPYKRLRRIDL 322
Query: 297 HHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDL 356
+NQI L SF+ L +L+ L L N+I + L +L L L+ N + L D
Sbjct: 323 SNNQITELASDSFQGLRSLNSLVLYGNKITELPKGLFDGLFSLQLLLLNANKINCLRVDS 382
Query: 357 ITPLKSLQELRLDDNDI 373
L++L L L DN +
Sbjct: 383 FQDLQNLNLLSLYDNKL 399
Score = 131 (51.2 bits), Expect = 0.00017, P = 0.00017
Identities = 76/318 (23%), Positives = 135/318 (42%)
Query: 68 LPHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVT-LHGLVIS 126
LP + + + + I E E V+ L T + + + L+G+ L L++
Sbjct: 540 LPQLRKINLSNNKITDIEEGT--FEGASGVNELILTSNRLEGVHYSMLKGLGGLRTLMLR 597
Query: 127 SGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENT 186
S + +++G+F GLSS ++ L L +NL++ + A L +L L+L N N
Sbjct: 598 SNRISCVNNGSFTGLSS-VRLLSLYDNLITSMSPGAFDTLH-SLSTLNLLANPFNC--NC 653
Query: 187 SFKGLSSLNFLDLSYNKLMTLSQDCLAPL----VTLRVLRLQ------GN-RLTVSVVAA 235
L L +++T + C +P + ++ + +Q GN + S +A
Sbjct: 654 HLAWLGEW----LRKKRIVTGNPRCQSPYFLKEIPIQDVAVQDFACEEGNDENSCSPLAR 709
Query: 236 LQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLS 295
S D + + + P +PR + L + N+F+ V L+ LT +
Sbjct: 710 CPAECSCLDTVVRCSNKGLKVLPKGIPR--DVTELYLDGNEFTQVPL-ELSNYKHLTLID 766
Query: 296 CHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQD 355
+NQI L +HSF +S L L L++NR+ + + L +L L L N + +
Sbjct: 767 LSNNQISTLSNHSFSNMSELLTLILSYNRLRCIPAKAFDGLKSLRLLSLHGNDIAVIPDG 826
Query: 356 LITPLKSLQELRLDDNDI 373
L SL L L N +
Sbjct: 827 AFKDLSSLSHLALGANPL 844
Score = 113 (44.8 bits), Expect = 2.3e-17, Sum P(3) = 2.3e-17
Identities = 36/122 (29%), Positives = 61/122 (50%)
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRR-GALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLS 316
P +P+ ++ L + +N+F+ + G L +L ++ +N+I +E+ +F S ++
Sbjct: 511 PDHIPQYTA--ELRLNNNEFTVLEATGIFKKLPQLRKINLSNNKITDIEEGTFEGASGVN 568
Query: 317 HLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI-SM 375
L L NR+ V + L L L TL L N + + T L S++ L L DN I SM
Sbjct: 569 ELILTSNRLEGVHYSMLKGLGGLRTLMLRSNRISCVNNGSFTGLSSVRLLSLYDNLITSM 628
Query: 376 EP 377
P
Sbjct: 629 SP 630
Score = 113 (44.8 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 37/132 (28%), Positives = 63/132 (47%)
Query: 241 SVTDLDLSHNLLAG-PLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 299
++T++ L N + P G + P L+ + +++NQ + + + GL L SL + N
Sbjct: 292 TITEIRLEQNSIKIIPAG-AFAP-YKRLRRIDLSNNQITELASDSFQGLRSLNSLVLYGN 349
Query: 300 QIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITP 359
+I L F L +L L L N+I + S L NL L L N L+ + + +
Sbjct: 350 KITELPKGLFDGLFSLQLLLLNANKINCLRVDSFQDLQNLNLLSLYDNKLQTIAKGTFSS 409
Query: 360 LKSLQELRLDDN 371
L+++Q L L N
Sbjct: 410 LRAIQTLHLAQN 421
Score = 112 (44.5 bits), Expect = 5.3e-15, Sum P(2) = 5.3e-15
Identities = 29/70 (41%), Positives = 42/70 (60%)
Query: 312 LSTLSHL---DLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRL 368
LS HL DL++N+I +S S +++S L TL LS+N LR + LKSL+ L L
Sbjct: 756 LSNYKHLTLIDLSNNQISTLSNHSFSNMSELLTLILSYNRLRCIPAKAFDGLKSLRLLSL 815
Query: 369 DDNDISMEPE 378
NDI++ P+
Sbjct: 816 HGNDIAVIPD 825
Score = 104 (41.7 bits), Expect = 2.4e-10, Sum P(3) = 2.4e-10
Identities = 34/120 (28%), Positives = 59/120 (49%)
Query: 93 PDERVSLLDCTLSNVTVLPGKFLEGV-TLHGLVISSGELKNISDGAFIGLSSPLQALGLP 151
P +R+ +D + + +T L +G+ +L+ LV+ ++ + G F GL S LQ L L
Sbjct: 313 PYKRLRRIDLSNNQITELASDSFQGLRSLNSLVLYGNKITELPKGLFDGLFS-LQLLLLN 371
Query: 152 NNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDC 211
N ++ + + L NL+ L L N+L + +F L ++ L L+ N M DC
Sbjct: 372 ANKINCLRVDSFQDLQ-NLNLLSLYDNKLQTIAKGTFSSLRAIQTLHLAQNPFMC---DC 427
Score = 86 (35.3 bits), Expect = 1.3e-14, Sum P(3) = 1.3e-14
Identities = 26/104 (25%), Positives = 49/104 (47%)
Query: 294 LSCHHNQIDVLEDHS-FRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRAL 352
L ++N+ VLE F+ L L ++L++N+I + + S + L L+ N L +
Sbjct: 521 LRLNNNEFTVLEATGIFKKLPQLRKINLSNNKITDIEEGTFEGASGVNELILTSNRLEGV 580
Query: 353 TQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELIYSGV 396
++ L L+ L L N IS + G +++ L +Y +
Sbjct: 581 HYSMLKGLGGLRTLMLRSNRISCVNNGSFTGLSSVRLLSLYDNL 624
Score = 69 (29.3 bits), Expect = 2.3e-17, Sum P(3) = 2.3e-17
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
+S L L +++N+ + A GL L LS H N I V+ D +F ++
Sbjct: 783 MSELLTLILSYNRLRCIPAKAFDGLKSLRLLSLHGNDIAVIPDGAFKDL 831
Score = 64 (27.6 bits), Expect = 7.5e-17, Sum P(3) = 7.5e-17
Identities = 15/38 (39%), Positives = 22/38 (57%)
Query: 655 NQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
N+F+ V L+ LT + +NQI L +HSFSN+
Sbjct: 747 NEFTQVPL-ELSNYKHLTLIDLSNNQISTLSNHSFSNM 783
Score = 59 (25.8 bits), Expect = 8.5e-11, Sum P(2) = 8.5e-11
Identities = 14/67 (20%), Positives = 34/67 (50%)
Query: 618 VAQQEDDINRNNSDSRYVKLQATTIL--LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLS 675
+ Q ++ NN++ + L+AT I L L+ +++++N+ + + G G + L
Sbjct: 514 IPQYTAELRLNNNE--FTVLEATGIFKKLPQLRKINLSNNKITDIEEGTFEGASGVNELI 571
Query: 676 CHHNQID 682
N+++
Sbjct: 572 LTSNRLE 578
Score = 56 (24.8 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 21/94 (22%), Positives = 38/94 (40%)
Query: 600 ICRTPRNSTIHHHACFIPVAQQEDDINRNNSDSRYVKL-QATTILLSSLKVLSIAHNQFS 658
+C P++ H +C + + + N D R L + T L ++ + + N
Sbjct: 249 MCTGPQS----HSSCSVLQCPELCTCSNNVVDCRGKGLTEIPTNLPETITEIRLEQNSIK 304
Query: 659 SVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
+ GA A +L + +NQI L SF +
Sbjct: 305 IIPAGAFAPYKRLRRIDLSNNQITELASDSFQGL 338
Score = 54 (24.1 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 13/49 (26%), Positives = 27/49 (55%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L SL++L + N+ + +R + L L LS + N++ + +FS++
Sbjct: 362 LFSLQLLLLNANKINCLRVDSFQDLQNLNLLSLYDNKLQTIAKGTFSSL 410
Score = 53 (23.7 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 16/66 (24%), Positives = 30/66 (45%)
Query: 628 NNSDSRYVKLQATTIL-LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLED 686
N S+++ ++ T S + L + N+ V L GL L +L N+I + +
Sbjct: 547 NLSNNKITDIEEGTFEGASGVNELILTSNRLEGVHYSMLKGLGGLRTLMLRSNRISCVNN 606
Query: 687 HSFSNV 692
SF+ +
Sbjct: 607 GSFTGL 612
Score = 52 (23.4 bits), Expect = 4.5e-10, Sum P(2) = 4.5e-10
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L SL L + N+ + + +G GL L L + N+I+ L SF ++
Sbjct: 338 LRSLNSLVLYGNKITELPKGLFDGLFSLQLLLLNANKINCLRVDSFQDL 386
Score = 50 (22.7 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 12/32 (37%), Positives = 21/32 (65%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLS 675
LSS+++LS+ N +S+ GA L L++L+
Sbjct: 612 LSSVRLLSLYDNLITSMSPGAFDTLHSLSTLN 643
Score = 49 (22.3 bits), Expect = 9.1e-10, Sum P(2) = 9.1e-10
Identities = 12/46 (26%), Positives = 23/46 (50%)
Query: 647 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L+ + +++NQ + + + GL L SL + N+I L F +
Sbjct: 317 LRRIDLSNNQITELASDSFQGLRSLNSLVLYGNKITELPKGLFDGL 362
Score = 47 (21.6 bits), Expect = 4.1e-15, Sum P(3) = 4.1e-15
Identities = 8/46 (17%), Positives = 26/46 (56%)
Query: 647 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L ++ +++NQ S++ + + + +L +L +N++ + +F +
Sbjct: 762 LTLIDLSNNQISTLSNHSFSNMSELLTLILSYNRLRCIPAKAFDGL 807
Score = 44 (20.5 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 11/46 (23%), Positives = 24/46 (52%)
Query: 650 LSIAHNQFSSVRR-GALAGLDKLTSLSCHHNQIDVLEDHSFSNVIG 694
L + +N+F+ + G L +L ++ +N+I +E+ +F G
Sbjct: 521 LRLNNNEFTVLEATGIFKKLPQLRKINLSNNKITDIEEGTFEGASG 566
>UNIPROTKB|Q7L985 [details] [associations]
symbol:LINGO2 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 2" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 EMBL:CH471071
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 eggNOG:NOG278536 HOGENOM:HOG000246971
HOVERGEN:HBG057546 EMBL:AY358114 EMBL:AK056372 EMBL:AK172834
EMBL:AK290972 EMBL:BC137514 IPI:IPI00001120 RefSeq:NP_001245211.1
RefSeq:NP_689783.1 UniGene:Hs.662661 UniGene:Hs.739574
ProteinModelPortal:Q7L985 SMR:Q7L985 STRING:Q7L985
PhosphoSite:Q7L985 DMDM:172046190 PaxDb:Q7L985 PRIDE:Q7L985
Ensembl:ENST00000308675 Ensembl:ENST00000379992 GeneID:158038
KEGG:hsa:158038 UCSC:uc003zqu.1 CTD:158038 GeneCards:GC09M027940
HGNC:HGNC:21207 HPA:CAB025361 HPA:HPA016633 MIM:609793
neXtProt:NX_Q7L985 PharmGKB:PA162394096 InParanoid:Q7L985
OMA:DQDSGMY OrthoDB:EOG4NS3B7 PhylomeDB:Q7L985 GenomeRNAi:158038
NextBio:87602 Bgee:Q7L985 CleanEx:HS_LINGO2 Genevestigator:Q7L985
Uniprot:Q7L985
Length = 606
Score = 243 (90.6 bits), Expect = 3.1e-17, P = 3.1e-17
Identities = 91/322 (28%), Positives = 154/322 (47%)
Query: 64 CACDLPH-TLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNV-TVLPGKFLEGVTLH 121
C C + ++ C ++ L AI E + P E +LD + + + +V P +F+ L
Sbjct: 32 CECSAQNKSVSC--HRRRLIAIPEGI----PIE-TKILDLSKNRLKSVNPEEFISYPLLE 84
Query: 122 GLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLY 181
+ +S + N+ GAF L + L++L L N L +VP L+ NL +LD+S N++
Sbjct: 85 EIDLSDNIIANVEPGAFNNLFN-LRSLRLKGNRLKLVPLGVFTGLS-NLTKLDISENKIV 142
Query: 182 KLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRS 241
L + F+ L +L L++ N L+ +S + L++L L L+ LT AL LRS
Sbjct: 143 ILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEKCNLTAVPTEALSHLRS 202
Query: 242 VTDLDLSH-NLLAGPLGPSTVPRLSSLKVLSIAH-NQFSSVRRGALAGLDKLTSLSCHHN 299
+ L L H N+ P+ RL LK L I + + +L GL+ LTSLS +
Sbjct: 203 LISLHLKHLNINNMPV--YAFKRLFHLKHLEIDYWPLLDMMPANSLYGLN-LTSLSVTNT 259
Query: 300 QIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITP 359
+ + +F+ L L+HL+L++N I + + L L L + LR +
Sbjct: 260 NLSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQELHIVGAQLRTIEPHSFQG 319
Query: 360 LKSLQELRLDDNDISMEPECIY 381
L+ L+ L + N + E ++
Sbjct: 320 LRFLRVLNVSQNLLETLEENVF 341
Score = 201 (75.8 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 73/288 (25%), Positives = 132/288 (45%)
Query: 95 ERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNL 154
E + L D ++NV PG F L L + LK + G F GLS+ L L + N
Sbjct: 84 EEIDLSDNIIANVE--PGAFNNLFNLRSLRLKGNRLKLVPLGVFTGLSN-LTKLDISENK 140
Query: 155 LSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAP 214
+ ++ L NL L++ N L + + +F GL SL L L L + + L+
Sbjct: 141 IVILLDYMFQDLH-NLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEKCNLTAVPTEALSH 199
Query: 215 LVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAH 274
L +L L L+ + V A + L + L++ + L + +++ L+ L LS+ +
Sbjct: 200 LRSLISLHLKHLNINNMPVYAFKRLFHLKHLEIDYWPLLDMMPANSLYGLN-LTSLSVTN 258
Query: 275 NQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLA 334
S+V A L LT L+ +N I +E F L L L + ++ + S
Sbjct: 259 TNLSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQELHIVGAQLRTIEPHSFQ 318
Query: 335 HLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYV 382
L L L++S N L L +++ + ++L+ L +++N ++ + +++
Sbjct: 319 GLRFLRVLNVSQNLLETLEENVFSSPRALEVLSINNNPLACDCRLLWI 366
Score = 161 (61.7 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 52/181 (28%), Positives = 86/181 (47%)
Query: 214 PLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIA 273
P+ T ++L L NRL + ++DLS N++A + P L +L+ L +
Sbjct: 56 PIET-KILDLSKNRLKSVNPEEFISYPLLEEIDLSDNIIAN-VEPGAFNNLFNLRSLRLK 113
Query: 274 HNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASL 333
N+ V G GL LT L N+I +L D+ F+ L L L++ N +V +S +
Sbjct: 114 GNRLKLVPLGVFTGLSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRAF 173
Query: 334 AHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVG-FNTMDLELI 392
+ L +L L L L A+ + ++ L+SL L L +I+ P + F+ LE+
Sbjct: 174 SGLLSLEQLTLEKCNLTAVPTEALSHLRSLISLHLKHLNINNMPVYAFKRLFHLKHLEID 233
Query: 393 Y 393
Y
Sbjct: 234 Y 234
Score = 150 (57.9 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 65/213 (30%), Positives = 106/213 (49%)
Query: 67 DLPHTLRCT-ANKSDLYAISE-SLRGLEPDERVSLLDCTLSNVTVLPGKFLEGV-TLHGL 123
DL H L+ +DL IS + GL E+++L C N+T +P + L + +L L
Sbjct: 151 DL-HNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEKC---NLTAVPTEALSHLRSLISL 206
Query: 124 VISSGELKNISDGAFIGLSSPLQALGLPN-NLLSVVPTSALAPLAPNLDRLDLSHNQLYK 182
+ + N+ AF L L+ L + LL ++P ++L L NL L +++ L
Sbjct: 207 HLKHLNINNMPVYAFKRLFH-LKHLEIDYWPLLDMMPANSLYGL--NLTSLSVTNTNLST 263
Query: 183 LENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSV 242
+ +FK L L L+LSYN + T+ + L+ L+ L + G +L + QGLR +
Sbjct: 264 VPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQELHIVGAQLRTIEPHSFQGLRFL 323
Query: 243 TDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHN 275
L++S NLL L + +L+VLSI +N
Sbjct: 324 RVLNVSQNLLE-TLEENVFSSPRALEVLSINNN 355
Score = 135 (52.6 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 56/246 (22%), Positives = 112/246 (45%)
Query: 232 VVAALQGLRSVTD-LDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDK 290
++A +G+ T LDLS N L + P L+ + ++ N ++V GA L
Sbjct: 48 LIAIPEGIPIETKILDLSKNRLKS-VNPEEFISYPLLEEIDLSDNIIANVEPGAFNNLFN 106
Query: 291 LTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLR 350
L SL N++ ++ F LS L+ LD++ N+IV + L NL +L++ N L
Sbjct: 107 LRSLRLKGNRLKLVPLGVFTGLSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLV 166
Query: 351 ALTQDLITPLKSLQELRLDDNDISMEP-ECIYVGFNTMDLELIYSGVWRHSTLLIPVMLS 409
++ + L SL++L L+ +++ P E + + + L L + + + + +
Sbjct: 167 YISHRAFSGLLSLEQLTLEKCNLTAVPTEALSHLRSLISLHLKHLNI---NNMPVYAFKR 223
Query: 410 LCTRSSVVTRYRYCVVLIEGSNILDQSALVLGCSEI-LALVPTLTSQPLSYVTSLRANVT 468
L + Y + ++ +++ + L + L+ VP L + L Y+T L +
Sbjct: 224 LFHLKHLEIDYWPLLDMMPANSLYGLNLTSLSVTNTNLSTVPFLAFKHLVYLTHLNLSYN 283
Query: 469 GLGTVQ 474
+ T++
Sbjct: 284 PISTIE 289
Score = 58 (25.5 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 12/43 (27%), Positives = 23/43 (53%)
Query: 650 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L++++N S++ G + L +L L Q+ +E HSF +
Sbjct: 278 LNLSYNPISTIEAGMFSDLIRLQELHIVGAQLRTIEPHSFQGL 320
Score = 55 (24.4 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 17/57 (29%), Positives = 29/57 (50%)
Query: 637 LQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNVI 693
+ A ++ +L LS+ + S+V A L LT L+ +N I +E FS++I
Sbjct: 241 MPANSLYGLNLTSLSVTNTNLSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLI 297
Score = 49 (22.3 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 14/48 (29%), Positives = 24/48 (50%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSN 691
L L+ L I Q ++ + GL L L+ N ++ LE++ FS+
Sbjct: 296 LIRLQELHIVGAQLRTIEPHSFQGLRFLRVLNVSQNLLETLEENVFSS 343
>FB|FBgn0243486 [details] [associations]
symbol:rdo "reduced ocelli" species:7227 "Drosophila
melanogaster" [GO:0008056 "ocellus development" evidence=IMP]
InterPro:IPR001611 PROSITE:PS51450 EMBL:AE014134 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GeneTree:ENSGT00700000104286
GO:GO:0008056 EMBL:BT004502 RefSeq:NP_609861.1 UniGene:Dm.21796
SMR:Q9VJA9 MINT:MINT-990018 STRING:Q9VJA9
EnsemblMetazoa:FBtr0081029 GeneID:35077 KEGG:dme:Dmel_CG15151
UCSC:CG15151-RA CTD:35077 FlyBase:FBgn0243486 InParanoid:Q9VJA9
OMA:FRGQDNL OrthoDB:EOG4CZ8WX GenomeRNAi:35077 NextBio:791738
Uniprot:Q9VJA9
Length = 741
Score = 253 (94.1 bits), Expect = 3.2e-17, Sum P(2) = 3.2e-17
Identities = 92/315 (29%), Positives = 147/315 (46%)
Query: 64 CACDLPHTLRCTA--NKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLH 121
C C + R A K L ++ S L+ D +V ++ +++T+ P + + L
Sbjct: 28 CQCSMDDLDRYQAICTKGGLNSLL-SPNELDVDVKVIIIRGPRNSITIGPA-LRQFMKLE 85
Query: 122 GLVISSGELKNISDGAFIGLSSPLQALGLP-NNLLSVVPTSALAPLAPNLDRLDLSHNQL 180
L I+ L I +F GL L+ L L NN+ ++ + NL LDLS N++
Sbjct: 86 ILRITDSNLPAIGAESFWGLKY-LRILDLSKNNITNITENNFRGQ--DNLLELDLSKNKV 142
Query: 181 YKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQG-- 238
++ +++F+ L+ L L+L+ N ++ L Q L L+ L L GN L LQ
Sbjct: 143 LRMASSTFRHLTDLRRLNLADNSIVELVQRNFFMLSRLKYLDLSGNPLQ-----DLQPDV 197
Query: 239 LRSVTDLDL--SHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSC 296
R V +L + N + P L L L + N+F + + + +LT +
Sbjct: 198 FRDVPELKVLKCRNCQLKKINPQMYNLLPLLSELDLGRNEFKFLDKDEFRDVKRLTKVLL 257
Query: 297 HHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDL 356
NQ+ V+ D FR +L+HLDL++NR+ V S L+NLT LDLS+N L L
Sbjct: 258 DGNQLSVVVDQLFRMQKSLNHLDLSYNRLAKVPNDSFLQLTNLTFLDLSYNKLVRLEPQS 317
Query: 357 ITPLKSLQELRLDDN 371
I L +L L + N
Sbjct: 318 IRSLSNLLTLNISGN 332
Score = 209 (78.6 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 74/260 (28%), Positives = 124/260 (47%)
Query: 96 RVSLLDCTLSNVTVLPGKFLEGVT-LHGLVISSGELKNISDGAFIGLSSPLQALGLPNNL 154
++ +L T SN+ + + G+ L L +S + NI++ F G + L+ L L N
Sbjct: 83 KLEILRITDSNLPAIGAESFWGLKYLRILDLSKNNITNITENNFRGQDNLLE-LDLSKNK 141
Query: 155 LSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAP 214
+ + +S L +L RL+L+ N + +L +F LS L +LDLS N L L D
Sbjct: 142 VLRMASSTFRHLT-DLRRLNLADNSIVELVQRNFFMLSRLKYLDLSGNPLQDLQPDVFRD 200
Query: 215 LVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAH 274
+ L+VL+ + +L L +++LDL N L + L + +
Sbjct: 201 VPELKVLKCRNCQLKKINPQMYNLLPLLSELDLGRNEFKF-LDKDEFRDVKRLTKVLLDG 259
Query: 275 NQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLA 334
NQ S V L L +N++ + + SF L+ L+ LDL++N++V + S+
Sbjct: 260 NQLSVVVDQLFRMQKSLNHLDLSYNRLAKVPNDSFLQLTNLTFLDLSYNKLVRLEPQSIR 319
Query: 335 HLSNLTTLDLSHNFLRALTQ 354
LSNL TL++S N L L +
Sbjct: 320 SLSNLLTLNISGNVLMDLRE 339
Score = 178 (67.7 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 84/312 (26%), Positives = 142/312 (45%)
Query: 72 LRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGELK 131
L + NK L S + R L R++L D ++ V ++ F L L +S L+
Sbjct: 135 LDLSKNKV-LRMASSTFRHLTDLRRLNLADNSI--VELVQRNFFMLSRLKYLDLSGNPLQ 191
Query: 132 NISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGL 191
++ F + L+ L N L + + L P L LDL N+ L+ F+ +
Sbjct: 192 DLQPDVFRDVPE-LKVLKCRNCQLKKI-NPQMYNLLPLLSELDLGRNEFKFLDKDEFRDV 249
Query: 192 SSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLT-VSVVAALQGLRSVTDLDLSHN 250
L + L N+L + +L L L NRL V + LQ L ++T LDLS+N
Sbjct: 250 KRLTKVLLDGNQLSVVVDQLFRMQKSLNHLDLSYNRLAKVPNDSFLQ-LTNLTFLDLSYN 308
Query: 251 LLAGPLGPSTVPRLSSLKVLSIAHNQFSSVR--RGALAGLDKLTSLS-CHHNQIDVLEDH 307
L L P ++ LS+L L+I+ N +R R + +LT L+ + V H
Sbjct: 309 KLVR-LEPQSIRSLSNLLTLNISGNVLMDLREMRETFELIPQLTHLAIADMGTMPVGLLH 367
Query: 308 SFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELR 367
F+ L +L+++ N + + + L LDLS N L +++D + ++ ++ +R
Sbjct: 368 PFKQLR---YLNISGNSLNNTALEVIDPCRELEFLDLSRNQLHGISEDTVLRIQGIRNVR 424
Query: 368 LDDNDISMEPEC 379
LD+N + + EC
Sbjct: 425 LDNNPLICD-EC 435
Score = 163 (62.4 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 64/263 (24%), Positives = 109/263 (41%)
Query: 151 PNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQD 210
P N +++ P AL L+ L ++ + L + SF GL L LDLS N + ++++
Sbjct: 68 PRNSITIGP--ALRQFM-KLEILRITDSNLPAIGAESFWGLKYLRILDLSKNNITNITEN 124
Query: 211 CLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVL 270
L L L N++ + + L + L+L+ N + L LS LK L
Sbjct: 125 NFRGQDNLLELDLSKNKVLRMASSTFRHLTDLRRLNLADNSIV-ELVQRNFFMLSRLKYL 183
Query: 271 SIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSG 330
++ N ++ + +L L C + Q+ + + L LS LDL N +
Sbjct: 184 DLSGNPLQDLQPDVFRDVPELKVLKCRNCQLKKINPQMYNLLPLLSELDLGRNEFKFLDK 243
Query: 331 ASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMD-L 389
+ LT + L N L + L KSL L L N ++ P ++ + L
Sbjct: 244 DEFRDVKRLTKVLLDGNQLSVVVDQLFRMQKSLNHLDLSYNRLAKVPNDSFLQLTNLTFL 303
Query: 390 ELIYSGVWRHSTLLIPVMLSLCT 412
+L Y+ + R I + +L T
Sbjct: 304 DLSYNKLVRLEPQSIRSLSNLLT 326
Score = 133 (51.9 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 37/140 (26%), Positives = 70/140 (50%)
Query: 244 DLDLSHNLLAGPLGPSTV-PRLSS---LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 299
D+D+ ++ GP T+ P L L++L I + ++ + GL L L N
Sbjct: 57 DVDVKVIIIRGPRNSITIGPALRQFMKLEILRITDSNLPAIGAESFWGLKYLRILDLSKN 116
Query: 300 QIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITP 359
I + +++FR L LDL+ N+++ ++ ++ HL++L L+L+ N + L Q
Sbjct: 117 NITNITENNFRGQDNLLELDLSKNKVLRMASSTFRHLTDLRRLNLADNSIVELVQRNFFM 176
Query: 360 LKSLQELRLDDNDIS-MEPE 378
L L+ L L N + ++P+
Sbjct: 177 LSRLKYLDLSGNPLQDLQPD 196
Score = 54 (24.1 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 13/47 (27%), Positives = 22/47 (46%)
Query: 643 LLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
LL L L + N+F + + + +LT + NQ+ V+ D F
Sbjct: 224 LLPLLSELDLGRNEFKFLDKDEFRDVKRLTKVLLDGNQLSVVVDQLF 270
Score = 38 (18.4 bits), Expect = 3.2e-17, Sum P(2) = 3.2e-17
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 621 QEDDINRNNSDSRYVKLQATTI 642
+ED +N + S L+ATTI
Sbjct: 538 REDHLNGSESKCLEKNLEATTI 559
>UNIPROTKB|O94898 [details] [associations]
symbol:LRIG2 "Leucine-rich repeats and immunoglobulin-like
domains protein 2" species:9606 "Homo sapiens" [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886 GO:GO:0005737
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 HOGENOM:HOG000113380
HOVERGEN:HBG052353 EMBL:AB018349 EMBL:AL161998 IPI:IPI00478892
PIR:T47152 RefSeq:NP_055628.1 UniGene:Hs.448972 UniGene:Hs.729143
ProteinModelPortal:O94898 SMR:O94898 IntAct:O94898 STRING:O94898
PhosphoSite:O94898 PaxDb:O94898 PRIDE:O94898
Ensembl:ENST00000361127 GeneID:9860 KEGG:hsa:9860 UCSC:uc001edf.1
CTD:9860 GeneCards:GC01P113615 HGNC:HGNC:20889 HPA:HPA015538
MIM:608869 neXtProt:NX_O94898 PharmGKB:PA134905053
InParanoid:O94898 OMA:FPTNHER OrthoDB:EOG41NTKF GenomeRNAi:9860
NextBio:37168 Bgee:O94898 CleanEx:HS_LRIG2 Genevestigator:O94898
GermOnline:ENSG00000198799 Uniprot:O94898
Length = 1065
Score = 242 (90.2 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 80/305 (26%), Positives = 143/305 (46%)
Query: 92 EPDERVSLLDCTLSNVTVLPGKFLEGV-TLHGLVISSGELKNISDGAFIGLSSPLQALGL 150
EP ++LL + + + + L+ L L +SS + I +F + L+ L L
Sbjct: 117 EPTSNITLLSLVHNIIPEINAQALQFYPALESLDLSSNIISEIKTSSFPRMQ--LKYLNL 174
Query: 151 PNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQD 210
NN ++ + L+ +L + L+ N++ + FK L L FL+L N++ +
Sbjct: 175 SNNRITTLEAGCFDNLSSSLLVVKLNRNRMSMIPPKIFK-LPHLQFLELKRNRIKIVEGL 233
Query: 211 CLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVL 270
L +LR L++Q N ++ A GL ++ +L+L HN L + + L L+ L
Sbjct: 234 TFQGLDSLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTR-VNKGWLYGLRMLQQL 292
Query: 271 SIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSG 330
++ N + A +L+ L +NQ+ L++ +F LS L L+L NR+ ++
Sbjct: 293 YVSQNAIERISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIAD 352
Query: 331 ASLAHLSNLTTLDLSHNFLRALTQDL---ITPLKSLQELRLDDNDISMEPECIYVGFNTM 387
LSNL TLDL +N + +D L SL +L L N I + ++G ++
Sbjct: 353 GVFRFLSNLQTLDLRNNEISWAIEDASEAFAGLTSLTKLILQGNQIKSITKKAFIGLESL 412
Query: 388 D-LEL 391
+ L+L
Sbjct: 413 EHLDL 417
Score = 223 (83.6 bits), Expect = 3.5e-17, Sum P(2) = 3.5e-17
Identities = 76/294 (25%), Positives = 129/294 (43%)
Query: 96 RVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLL 155
R+ LLDC+ + + L G+ I +S+ S LQ + + N L
Sbjct: 50 RIPLLDCSRRKLPAPSWRALSGLLPPDTAILDFSHNRLSNWNISLESQTLQEVKMNYNEL 109
Query: 156 SVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPL 215
+ +P P + N+ L L HN + ++ + + +L LDLS N + + P
Sbjct: 110 TEIPYFG-EPTS-NITLLSLVHNIIPEINAQALQFYPALESLDLSSNIISEIKTSSF-PR 166
Query: 216 VTLRVLRLQGNRLTVSVVAALQGLRS-VTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAH 274
+ L+ L L NR+T L S + + L+ N ++ + P + +L L+ L +
Sbjct: 167 MQLKYLNLSNNRITTLEAGCFDNLSSSLLVVKLNRNRMS--MIPPKIFKLPHLQFLELKR 224
Query: 275 NQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLA 334
N+ V GLD L SL N I L+D +F L+ + L+L HN + V+ L
Sbjct: 225 NRIKIVEGLTFQGLDSLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTRVNKGWLY 284
Query: 335 HLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMD 388
L L L +S N + ++ D + L EL L N ++ E +VG + ++
Sbjct: 285 GLRMLQQLYVSQNAIERISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLE 338
Score = 199 (75.1 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 70/240 (29%), Positives = 113/240 (47%)
Query: 105 SNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALA 164
+ ++++P K + L L + +K + F GL S L++L + N +S + A
Sbjct: 202 NRMSMIPPKIFKLPHLQFLELKRNRIKIVEGLTFQGLDS-LRSLKMQRNGISKLKDGAFF 260
Query: 165 PLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQ 224
L N++ L+L HN L ++ GL L L +S N + +S D L L L
Sbjct: 261 GLN-NMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAIERISPDAWEFCQRLSELDLS 319
Query: 225 GNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFS-SVRRG 283
N+LT +A GL + L+L N + + LS+L+ L + +N+ S ++
Sbjct: 320 YNQLTRLDESAFVGLSLLERLNLGDNRVTH-IADGVFRFLSNLQTLDLRNNEISWAIEDA 378
Query: 284 --ALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAV--SGASLAHLSNL 339
A AGL LT L NQI + +F L +L HLDL +N I+++ + S HL L
Sbjct: 379 SEAFAGLTSLTKLILQGNQIKSITKKAFIGLESLEHLDLNNNAIMSIQENAFSQTHLKEL 438
Score = 74 (31.1 bits), Expect = 3.5e-17, Sum P(2) = 3.5e-17
Identities = 20/65 (30%), Positives = 35/65 (53%)
Query: 627 RNNSDSRYVKLQATTIL-LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLE 685
RNN S ++ + L+SL L + NQ S+ + A GL+ L L ++N I ++
Sbjct: 367 RNNEISWAIEDASEAFAGLTSLTKLILQGNQIKSITKKAFIGLESLEHLDLNNNAIMSIQ 426
Query: 686 DHSFS 690
+++FS
Sbjct: 427 ENAFS 431
Score = 58 (25.5 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 20/66 (30%), Positives = 31/66 (46%)
Query: 628 NNSDSRYVKLQATTI-LLSSLKVLSIAHNQFS-SVRRG--ALAGLDKLTSLSCHHNQIDV 683
N D+R + LS+L+ L + +N+ S ++ A AGL LT L NQI
Sbjct: 341 NLGDNRVTHIADGVFRFLSNLQTLDLRNNEISWAIEDASEAFAGLTSLTKLILQGNQIKS 400
Query: 684 LEDHSF 689
+ +F
Sbjct: 401 ITKKAF 406
Score = 52 (23.4 bits), Expect = 6.8e-15, Sum P(2) = 6.8e-15
Identities = 14/46 (30%), Positives = 24/46 (52%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID-VLEDHS 688
LS L+ L++ N+ + + G L L +L +N+I +ED S
Sbjct: 334 LSLLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNNEISWAIEDAS 379
Score = 51 (23.0 bits), Expect = 8.7e-15, Sum P(2) = 8.7e-15
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 647 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
L L +++NQ + + A GL L L+ N++ + D F
Sbjct: 313 LSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVF 355
>UNIPROTKB|Q86VH5 [details] [associations]
symbol:LRRTM3 "Leucine-rich repeat transmembrane neuronal
protein 3" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 HOGENOM:HOG000290681
HOVERGEN:HBG052362 EMBL:AY182028 EMBL:AY358315 EMBL:AK290168
EMBL:BX640611 EMBL:BC111492 EMBL:BC113715 EMBL:BC113717
IPI:IPI00179801 IPI:IPI00607819 RefSeq:NP_821079.3
UniGene:Hs.652155 ProteinModelPortal:Q86VH5 SMR:Q86VH5
STRING:Q86VH5 PhosphoSite:Q86VH5 DMDM:68052341 PaxDb:Q86VH5
PRIDE:Q86VH5 DNASU:347731 Ensembl:ENST00000361320
Ensembl:ENST00000373722 GeneID:347731 KEGG:hsa:347731
UCSC:uc001jmy.3 UCSC:uc001jmz.1 CTD:347731 GeneCards:GC10P068685
HGNC:HGNC:19410 HPA:HPA024109 MIM:610869 neXtProt:NX_Q86VH5
PharmGKB:PA134962991 InParanoid:Q86VH5 OMA:PCTYSKS
OrthoDB:EOG45TCMT PhylomeDB:Q86VH5 GenomeRNAi:347731 NextBio:99254
ArrayExpress:Q86VH5 Bgee:Q86VH5 CleanEx:HS_LRRTM3
Genevestigator:Q86VH5 Uniprot:Q86VH5
Length = 581
Score = 242 (90.2 bits), Expect = 3.6e-17, P = 3.6e-17
Identities = 89/295 (30%), Positives = 136/295 (46%)
Query: 81 LYAISESLRGLEPDERVS--LLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAF 138
L +S + RG R ++ C + +P G GL + L+ + F
Sbjct: 24 LTMLSSAERGCPKGCRCEGKMVYCESQKLQEIPSSISAGCL--GLSLRYNSLQKLKYNQF 81
Query: 139 IGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQL-YKLENTSFKGLSSLNFL 197
GL+ L L L +N +S + +A + L L LS N++ Y L NT F+ +++L L
Sbjct: 82 KGLNQ-LTWLYLDHNHISNIDENAFNGIR-RLKELILSSNRISYFLNNT-FRPVTNLRNL 138
Query: 198 DLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLG 257
DLSYN+L +L + L L L L+ N L V Q R++ LDL +N + L
Sbjct: 139 DLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLELLDLGYNRIRS-LA 197
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 317
+ + LK L + HNQFS + L L +L N+I V+ S+L
Sbjct: 198 RNVFAGMIRLKELHLEHNQFSKLNLALFPRLVSLQNLYLQWNKISVIGQTMSWTWSSLQR 257
Query: 318 LDLAHNRIVAVSGASLAH-LSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
LDL+ N I A SG S+ + NL L+L N L + Q+++ SL ++ L N
Sbjct: 258 LDLSGNEIEAFSGPSVFQCVPNLQRLNLDSNKLTFIGQEILDSWISLNDISLAGN 312
Score = 182 (69.1 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 56/201 (27%), Positives = 91/201 (45%)
Query: 173 LDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSV 232
L L +N L KL+ FKGL+ L +L L +N + + ++ + L+ L L NR++ +
Sbjct: 66 LSLRYNSLQKLKYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFL 125
Query: 233 VAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLT 292
+ + ++ +LDLS+N L LG L L L + N ++ L
Sbjct: 126 NNTFRPVTNLRNLDLSYNQLHS-LGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLE 184
Query: 293 SLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRAL 352
L +N+I L + F + L L L HN+ ++ A L +L L L N + +
Sbjct: 185 LLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRLVSLQNLYLQWNKISVI 244
Query: 353 TQDLITPLKSLQELRLDDNDI 373
Q + SLQ L L N+I
Sbjct: 245 GQTMSWTWSSLQRLDLSGNEI 265
Score = 171 (65.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 57/179 (31%), Positives = 83/179 (46%)
Query: 197 LDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPL 256
L L YN L L + L L L L N ++ A G+R + +L LS N ++ L
Sbjct: 66 LSLRYNSLQKLKYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFL 125
Query: 257 GPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLS 316
+ P +++L+ L +++NQ S+ GL KL SL N + + F+ L
Sbjct: 126 NNTFRP-VTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLE 184
Query: 317 HLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISM 375
LDL +NRI +++ A + L L L HN L L L SLQ L L N IS+
Sbjct: 185 LLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRLVSLQNLYLQWNKISV 243
Score = 151 (58.2 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 62/239 (25%), Positives = 100/239 (41%)
Query: 110 LPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPN 169
L F L L +S +L ++ F GL L +L L +N L +P N
Sbjct: 125 LNNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRK-LLSLHLRSNSLRTIPVRIFQDCR-N 182
Query: 170 LDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLT 229
L+ LDL +N++ L F G+ L L L +N+ L+ LV+L+ L LQ N+++
Sbjct: 183 LELLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRLVSLQNLYLQWNKIS 242
Query: 230 VSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLD 289
V S+ LDLS N + GPS + +L+ L++ N+ + + + L
Sbjct: 243 VIGQTMSWTWSSLQRLDLSGNEIEAFSGPSVFQCVPNLQRLNLDSNKLTFIGQEILDSWI 302
Query: 290 KLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNF 348
L +S N + + S L N I+ AS L + +D N+
Sbjct: 303 SLNDISLAGNIWECSRNICSLVNWLKSFKGLRENTIIC---ASPKELQGVNVIDAVKNY 358
Score = 145 (56.1 bits), Expect = 8.2e-09, Sum P(2) = 8.2e-09
Identities = 37/128 (28%), Positives = 64/128 (50%)
Query: 270 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 329
LS+ +N ++ GL++LT L HN I +++++F + L L L+ NRI
Sbjct: 66 LSLRYNSLQKLKYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFL 125
Query: 330 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDL 389
+ ++NL LDLS+N L +L + L+ L L L N + P I+ ++L
Sbjct: 126 NNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLEL 185
Query: 390 -ELIYSGV 396
+L Y+ +
Sbjct: 186 LDLGYNRI 193
Score = 68 (29.0 bits), Expect = 8.2e-09, Sum P(2) = 8.2e-09
Identities = 14/48 (29%), Positives = 25/48 (52%)
Query: 646 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNVI 693
+L++L + +N+ S+ R AG+ +L L HNQ L F ++
Sbjct: 182 NLELLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRLV 229
>MGI|MGI:2389177 [details] [associations]
symbol:Lrrtm3 "leucine rich repeat transmembrane neuronal 3"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=ISS] [GO:0030054 "cell junction" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:1902004 "positive regulation of
beta-amyloid formation" evidence=ISO;IMP] InterPro:IPR001611
PROSITE:PS51450 MGI:MGI:2389177 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GeneTree:ENSGT00700000104056 HOGENOM:HOG000290681
HOVERGEN:HBG052362 CTD:347731 OMA:PCTYSKS OrthoDB:EOG45TCMT
EMBL:AY182029 EMBL:AK032485 EMBL:AK035773 EMBL:AK035858
EMBL:AK035882 EMBL:AK036366 EMBL:AK163753 EMBL:BC113178
EMBL:BC113784 IPI:IPI00266935 IPI:IPI00607982 RefSeq:NP_848793.1
UniGene:Mm.431318 ProteinModelPortal:Q8BZ81 SMR:Q8BZ81
STRING:Q8BZ81 PhosphoSite:Q8BZ81 PaxDb:Q8BZ81 PRIDE:Q8BZ81
Ensembl:ENSMUST00000105439 GeneID:216028 KEGG:mmu:216028
UCSC:uc007fkk.1 UCSC:uc007fkl.1 InParanoid:Q14CH3 NextBio:374957
Bgee:Q8BZ81 CleanEx:MM_LRRTM3 Genevestigator:Q8BZ81
GermOnline:ENSMUSG00000042846 Uniprot:Q8BZ81
Length = 582
Score = 242 (90.2 bits), Expect = 3.6e-17, P = 3.6e-17
Identities = 89/295 (30%), Positives = 136/295 (46%)
Query: 81 LYAISESLRGLEPDERVS--LLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAF 138
L +S + RG R ++ C + +P G GL + L+ + F
Sbjct: 24 LTMLSSAERGCPKGCRCEGKMVYCESQKLQEIPSSISAGCL--GLSLRYNSLQKLKYNQF 81
Query: 139 IGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQL-YKLENTSFKGLSSLNFL 197
GL+ L L L +N +S + +A + L L LS N++ Y L NT F+ +++L L
Sbjct: 82 KGLNQ-LTWLYLDHNHISNIDENAFNGIR-RLKELILSSNRISYFLNNT-FRPVTNLRNL 138
Query: 198 DLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLG 257
DLSYN+L +L + L L L L+ N L V Q R++ LDL +N + L
Sbjct: 139 DLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLELLDLGYNRIRS-LA 197
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 317
+ + LK L + HNQFS + L L +L N+I V+ S+L
Sbjct: 198 RNVFAGMIRLKELHLEHNQFSKLNLALFPRLVSLQNLYMQWNKISVIGQTMSWTWSSLQR 257
Query: 318 LDLAHNRIVAVSGASLAH-LSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
LDL+ N I A SG S+ + NL L+L N L + Q+++ SL ++ L N
Sbjct: 258 LDLSGNEIEAFSGPSVFQCVPNLQRLNLDSNKLTFIGQEILDSWISLNDISLAGN 312
Score = 180 (68.4 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 55/201 (27%), Positives = 91/201 (45%)
Query: 173 LDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSV 232
L L +N L KL+ FKGL+ L +L L +N + + ++ + L+ L L NR++ +
Sbjct: 66 LSLRYNSLQKLKYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFL 125
Query: 233 VAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLT 292
+ + ++ +LDLS+N L LG L L L + N ++ L
Sbjct: 126 NNTFRPVTNLRNLDLSYNQLHS-LGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLE 184
Query: 293 SLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRAL 352
L +N+I L + F + L L L HN+ ++ A L +L L + N + +
Sbjct: 185 LLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRLVSLQNLYMQWNKISVI 244
Query: 353 TQDLITPLKSLQELRLDDNDI 373
Q + SLQ L L N+I
Sbjct: 245 GQTMSWTWSSLQRLDLSGNEI 265
Score = 169 (64.5 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 56/179 (31%), Positives = 83/179 (46%)
Query: 197 LDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPL 256
L L YN L L + L L L L N ++ A G+R + +L LS N ++ L
Sbjct: 66 LSLRYNSLQKLKYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFL 125
Query: 257 GPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLS 316
+ P +++L+ L +++NQ S+ GL KL SL N + + F+ L
Sbjct: 126 NNTFRP-VTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLE 184
Query: 317 HLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISM 375
LDL +NRI +++ A + L L L HN L L L SLQ L + N IS+
Sbjct: 185 LLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRLVSLQNLYMQWNKISV 243
Score = 149 (57.5 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 61/239 (25%), Positives = 100/239 (41%)
Query: 110 LPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPN 169
L F L L +S +L ++ F GL L +L L +N L +P N
Sbjct: 125 LNNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRK-LLSLHLRSNSLRTIPVRIFQDCR-N 182
Query: 170 LDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLT 229
L+ LDL +N++ L F G+ L L L +N+ L+ LV+L+ L +Q N+++
Sbjct: 183 LELLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRLVSLQNLYMQWNKIS 242
Query: 230 VSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLD 289
V S+ LDLS N + GPS + +L+ L++ N+ + + + L
Sbjct: 243 VIGQTMSWTWSSLQRLDLSGNEIEAFSGPSVFQCVPNLQRLNLDSNKLTFIGQEILDSWI 302
Query: 290 KLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNF 348
L +S N + + S L N I+ AS L + +D N+
Sbjct: 303 SLNDISLAGNIWECSRNICSLVNWLRSFKGLRENTIIC---ASPKELQGVNVIDAVKNY 358
Score = 145 (56.1 bits), Expect = 8.3e-09, Sum P(2) = 8.3e-09
Identities = 37/128 (28%), Positives = 64/128 (50%)
Query: 270 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 329
LS+ +N ++ GL++LT L HN I +++++F + L L L+ NRI
Sbjct: 66 LSLRYNSLQKLKYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFL 125
Query: 330 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDL 389
+ ++NL LDLS+N L +L + L+ L L L N + P I+ ++L
Sbjct: 126 NNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLEL 185
Query: 390 -ELIYSGV 396
+L Y+ +
Sbjct: 186 LDLGYNRI 193
Score = 68 (29.0 bits), Expect = 8.3e-09, Sum P(2) = 8.3e-09
Identities = 14/48 (29%), Positives = 25/48 (52%)
Query: 646 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNVI 693
+L++L + +N+ S+ R AG+ +L L HNQ L F ++
Sbjct: 182 NLELLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRLV 229
>RGD|1304866 [details] [associations]
symbol:Lrrtm3 "leucine rich repeat transmembrane neuronal 3"
species:10116 "Rattus norvegicus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
RGD:1304866 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GeneTree:ENSGT00700000104056 EMBL:CH473988 CTD:347731
OrthoDB:EOG45TCMT IPI:IPI00869756 RefSeq:NP_001099857.1
UniGene:Rn.214114 Ensembl:ENSRNOT00000033980 GeneID:294380
KEGG:rno:294380 UCSC:RGD:1304866 NextBio:638086 Uniprot:D3ZAL8
Length = 582
Score = 242 (90.2 bits), Expect = 3.6e-17, P = 3.6e-17
Identities = 89/295 (30%), Positives = 136/295 (46%)
Query: 81 LYAISESLRGLEPDERVS--LLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAF 138
L +S + RG R ++ C + +P G GL + L+ + F
Sbjct: 24 LTMLSSAERGCPKGCRCEGKMVYCESQKLQEIPSSISAGCL--GLSLRYNSLQKLKYNQF 81
Query: 139 IGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQL-YKLENTSFKGLSSLNFL 197
GL+ L L L +N +S + +A + L L LS N++ Y L NT F+ +++L L
Sbjct: 82 KGLNQ-LTWLYLDHNHISNIDENAFNGIR-RLKELILSSNRISYFLNNT-FRPVTNLRNL 138
Query: 198 DLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLG 257
DLSYN+L +L + L L L L+ N L V Q R++ LDL +N + L
Sbjct: 139 DLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLELLDLGYNRIRS-LA 197
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 317
+ + LK L + HNQFS + L L +L N+I V+ S+L
Sbjct: 198 RNVFAGMIRLKELHLEHNQFSKLNLALFPRLVSLQNLYMQWNKISVIGQTMSWTWSSLQR 257
Query: 318 LDLAHNRIVAVSGASLAH-LSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
LDL+ N I A SG S+ + NL L+L N L + Q+++ SL ++ L N
Sbjct: 258 LDLSGNEIEAFSGPSVFQCVPNLQRLNLDSNKLTFIGQEILDSWISLNDISLAGN 312
Score = 180 (68.4 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 55/201 (27%), Positives = 91/201 (45%)
Query: 173 LDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSV 232
L L +N L KL+ FKGL+ L +L L +N + + ++ + L+ L L NR++ +
Sbjct: 66 LSLRYNSLQKLKYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFL 125
Query: 233 VAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLT 292
+ + ++ +LDLS+N L LG L L L + N ++ L
Sbjct: 126 NNTFRPVTNLRNLDLSYNQLHS-LGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLE 184
Query: 293 SLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRAL 352
L +N+I L + F + L L L HN+ ++ A L +L L + N + +
Sbjct: 185 LLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRLVSLQNLYMQWNKISVI 244
Query: 353 TQDLITPLKSLQELRLDDNDI 373
Q + SLQ L L N+I
Sbjct: 245 GQTMSWTWSSLQRLDLSGNEI 265
Score = 169 (64.5 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 56/179 (31%), Positives = 83/179 (46%)
Query: 197 LDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPL 256
L L YN L L + L L L L N ++ A G+R + +L LS N ++ L
Sbjct: 66 LSLRYNSLQKLKYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFL 125
Query: 257 GPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLS 316
+ P +++L+ L +++NQ S+ GL KL SL N + + F+ L
Sbjct: 126 NNTFRP-VTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLE 184
Query: 317 HLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISM 375
LDL +NRI +++ A + L L L HN L L L SLQ L + N IS+
Sbjct: 185 LLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRLVSLQNLYMQWNKISV 243
Score = 145 (56.1 bits), Expect = 8.3e-09, Sum P(2) = 8.3e-09
Identities = 37/128 (28%), Positives = 64/128 (50%)
Query: 270 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 329
LS+ +N ++ GL++LT L HN I +++++F + L L L+ NRI
Sbjct: 66 LSLRYNSLQKLKYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFL 125
Query: 330 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDL 389
+ ++NL LDLS+N L +L + L+ L L L N + P I+ ++L
Sbjct: 126 NNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLEL 185
Query: 390 -ELIYSGV 396
+L Y+ +
Sbjct: 186 LDLGYNRI 193
Score = 68 (29.0 bits), Expect = 8.3e-09, Sum P(2) = 8.3e-09
Identities = 14/48 (29%), Positives = 25/48 (52%)
Query: 646 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNVI 693
+L++L + +N+ S+ R AG+ +L L HNQ L F ++
Sbjct: 182 NLELLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRLV 229
>ZFIN|ZDB-GENE-041111-75 [details] [associations]
symbol:lrig2 "leucine-rich repeats and
immunoglobulin-like domains 2" species:7955 "Danio rerio"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-041111-75 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101816 EMBL:CR391948 IPI:IPI00901536
Ensembl:ENSDART00000112700 Uniprot:E7F013
Length = 1044
Score = 246 (91.7 bits), Expect = 3.8e-17, P = 3.8e-17
Identities = 89/305 (29%), Positives = 147/305 (48%)
Query: 83 AISESLRGLEPDERVSLLDCTLSNVTVL-PGKFLEGVTLHGLVISSGELKNISDGAFIGL 141
+ISE G P ++ L+ + + ++ L PG F +L L I+ L + D F
Sbjct: 114 SISELKAGSFPPMQLKYLNLSKNKISSLEPGCFGNISSLLVLKINQNRLSLLPDKVFT-- 171
Query: 142 SSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSY 201
S LQ L L N + VV + L L L + N + KL + + GL ++ L+L Y
Sbjct: 172 LSQLQVLELRRNRIRVVESLIFKELKA-LKSLKMQRNGITKLMDGALFGLENMEELELEY 230
Query: 202 NKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTV 261
N L L++ L L LR+LR+ N + + A + + +LDLS N L+ L
Sbjct: 231 NNLTELNKGWLYGLHMLRILRVNQNNIGLIRADAWEFCHRLEELDLSFNHLSR-LEDWVF 289
Query: 262 PRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDV-LEDH--SFRALSTLSHL 318
LS L+ L++ NQ S + G + L + +L +N+I + +ED F L L+ L
Sbjct: 290 AGLSLLQSLNLGDNQISHLGEGVFSSLANVRTLDIRNNEISLAIEDFIGMFVGLKRLNSL 349
Query: 319 DLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPE 378
L +N+I ++ + L L LDLS N + ++ D T LK L+ L L+ + + + +
Sbjct: 350 VLQNNKIRTITKRAFEGLMELENLDLSKNGIMSIHPDAFTHLK-LKTLDLNSSSLLCDCQ 408
Query: 379 CIYVG 383
++G
Sbjct: 409 LQWLG 413
Score = 237 (88.5 bits), Expect = 9.3e-17, Sum P(2) = 9.3e-17
Identities = 88/296 (29%), Positives = 136/296 (45%)
Query: 99 LLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIG-LSSPLQALGLPNNLLSV 157
LLDC +T + VT H I+ EL + F+G SS + L L +N +S
Sbjct: 39 LLDCNRKRLTAAALEAPAWVT-HAS-INQNELTAVP---FLGDASSNITVLSLVHNRISE 93
Query: 158 VPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVT 217
V L P + +L+ LDLS N + +L+ SF + L +L+LS NK+ +L C + +
Sbjct: 94 VVAEQLLPYS-SLESLDLSSNSISELKAGSFPPMQ-LKYLNLSKNKISSLEPGCFGNISS 151
Query: 218 LRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTV-PRLSSLKVLSIAHNQ 276
L VL++ NRL++ + + L + L+L N + + S + L +LK L + N
Sbjct: 152 LLVLKINQNRLSL-LPDKVFTLSQLQVLELRRNRIR--VVESLIFKELKALKSLKMQRNG 208
Query: 277 FSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHL 336
+ + GAL GL+ + L +N + L L L L + N I + +
Sbjct: 209 ITKLMDGALFGLENMEELELEYNNLTELNKGWLYGLHMLRILRVNQNNIGLIRADAWEFC 268
Query: 337 SNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIY---VGFNTMDL 389
L LDLS N L L + L LQ L L DN IS E ++ T+D+
Sbjct: 269 HRLEELDLSFNHLSRLEDWVFAGLSLLQSLNLGDNQISHLGEGVFSSLANVRTLDI 324
Score = 235 (87.8 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 84/325 (25%), Positives = 152/325 (46%)
Query: 77 NKSDLYAISESLRGLEPDERVSLLDCTLSNVT-VLPGKFLEGVTLHGLVISSGELKNISD 135
N+++L A+ G + +++L + ++ V+ + L +L L +SS + +
Sbjct: 64 NQNELTAVP--FLG-DASSNITVLSLVHNRISEVVAEQLLPYSSLESLDLSSNSISELKA 120
Query: 136 GAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLN 195
G+F + L+ L L N +S + ++ +L L ++ N+L L + F LS L
Sbjct: 121 GSFPPMQ--LKYLNLSKNKISSLEPGCFGNIS-SLLVLKINQNRLSLLPDKVFT-LSQLQ 176
Query: 196 FLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGP 255
L+L N++ + L L+ L++Q N +T + AL GL ++ +L+L +N L
Sbjct: 177 VLELRRNRIRVVESLIFKELKALKSLKMQRNGITKLMDGALFGLENMEELELEYNNLT-E 235
Query: 256 LGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTL 315
L + L L++L + N +R A +L L N + LED F LS L
Sbjct: 236 LNKGWLYGLHMLRILRVNQNNIGLIRADAWEFCHRLEELDLSFNHLSRLEDWVFAGLSLL 295
Query: 316 SHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLI---TPLKSLQELRLDDND 372
L+L N+I + + L+N+ TLD+ +N + +D I LK L L L +N
Sbjct: 296 QSLNLGDNQISHLGEGVFSSLANVRTLDIRNNEISLAIEDFIGMFVGLKRLNSLVLQNNK 355
Query: 373 ISMEPECIYVGFNTMD-LELIYSGV 396
I + + G ++ L+L +G+
Sbjct: 356 IRTITKRAFEGLMELENLDLSKNGI 380
Score = 214 (80.4 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 75/290 (25%), Positives = 139/290 (47%)
Query: 91 LEPDERVSLLDCTLSNVTVLP--GKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQAL 148
LE V+ + +T +P G +T+ LV + + + SS L++L
Sbjct: 52 LEAPAWVTHASINQNELTAVPFLGDASSNITVLSLV--HNRISEVVAEQLLPYSS-LESL 108
Query: 149 GLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLS 208
L +N +S + + P+ L L+LS N++ LE F +SSL L ++ N+L +L
Sbjct: 109 DLSSNSISELKAGSFPPM--QLKYLNLSKNKISSLEPGCFGNISSLLVLKINQNRL-SLL 165
Query: 209 QDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLK 268
D + L L+VL L+ NR+ V + L+++ L + N + L + L +++
Sbjct: 166 PDKVFTLSQLQVLELRRNRIRVVESLIFKELKALKSLKMQRNGIT-KLMDGALFGLENME 224
Query: 269 VLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAV 328
L + +N + + +G L GL L L + N I ++ ++ L LDL+ N + +
Sbjct: 225 ELELEYNNLTELNKGWLYGLHMLRILRVNQNNIGLIRADAWEFCHRLEELDLSFNHLSRL 284
Query: 329 SGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPE 378
A LS L +L+L N + L + + + L +++ L + +N+IS+ E
Sbjct: 285 EDWVFAGLSLLQSLNLGDNQISHLGEGVFSSLANVRTLDIRNNEISLAIE 334
Score = 55 (24.4 bits), Expect = 9.3e-17, Sum P(2) = 9.3e-17
Identities = 14/53 (26%), Positives = 27/53 (50%)
Query: 644 LSSLKVLSIAHNQFSSVRR---GALAGLDKLTSLSCHHNQIDVLEDHSFSNVI 693
L++++ L I +N+ S G GL +L SL +N+I + +F ++
Sbjct: 316 LANVRTLDIRNNEISLAIEDFIGMFVGLKRLNSLVLQNNKIRTITKRAFEGLM 368
>FB|FBgn0034476 [details] [associations]
symbol:Toll-7 "Toll-7" species:7227 "Drosophila melanogaster"
[GO:0005886 "plasma membrane" evidence=NAS] [GO:0004888
"transmembrane signaling receptor activity" evidence=ISS;NAS]
[GO:0006952 "defense response" evidence=NAS] [GO:0016021 "integral
to membrane" evidence=ISS] [GO:0007165 "signal transduction"
evidence=IEA;ISS] [GO:0002752 "cell surface pattern recognition
receptor signaling pathway" evidence=IC] [GO:0008329 "pattern
recognition receptor activity" evidence=IC] [GO:0051607 "defense
response to virus" evidence=IMP] [GO:0046790 "virion binding"
evidence=IDA] [GO:0009897 "external side of plasma membrane"
evidence=IDA] [GO:0010508 "positive regulation of autophagy"
evidence=IMP] Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450 EMBL:AE013599
GO:GO:0016021 GO:GO:0009897 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0010508 GO:GO:0051607
GO:GO:0005622 InterPro:IPR000372 SMART:SM00013 GO:GO:0008329
GO:GO:0046790 GO:GO:0002752 GeneTree:ENSGT00700000104442
SUPFAM:SSF52200 FlyBase:FBgn0034476 EMBL:AF247765
RefSeq:NP_523797.1 UniGene:Dm.2660 SMR:Q7KIN0
EnsemblMetazoa:FBtr0086336 GeneID:37272 KEGG:dme:Dmel_CG8595
UCSC:CG8595-RA CTD:37272 InParanoid:Q7KIN0 OMA:NHAFIGR
GenomeRNAi:37272 NextBio:802851 Uniprot:Q7KIN0
Length = 1446
Score = 227 (85.0 bits), Expect = 4.6e-17, Sum P(2) = 4.6e-17
Identities = 92/318 (28%), Positives = 147/318 (46%)
Query: 86 ESLRGLEPDERVSLLDCTLSNVTVLPGKFL------EGVTLHGLVISSGELKNISD---G 136
+SL GL+ +++ LD +N+ LP FL + + L I + E +D G
Sbjct: 183 DSLGGLK---QLTDLDLGDNNLRQLPSGFLCPVGNLQVLNLTRNRIRTAEQMGFADMNCG 239
Query: 137 AFIGLS-SPLQALGLPNN-LLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSL 194
A G + S LQ L +N L S+ + ++ L L L+L++N L +L + GL+SL
Sbjct: 240 AGSGSAGSELQVLDASHNELRSISESWGISRLR-RLQHLNLAYNNLSELSGEALAGLASL 298
Query: 195 NFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHN-LLA 253
++LS N L TL + A LR + LQ N L L + +DLS N L +
Sbjct: 299 RIVNLSNNHLETLPEGLFAGSKELREIHLQQNELYELPKGLFHRLEQLLVVDLSGNQLTS 358
Query: 254 GPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALS 313
+ +T L L VL++AHN + + L L L+ +N I +ED++F L
Sbjct: 359 NHVDNTTFAGLIRLIVLNLAHNALTRIDYRTFKELYFLQILNLRNNSIGHIEDNAFLPLY 418
Query: 314 TLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 373
L L+LA NR+ + L L+ L L++N + + + L+EL L N +
Sbjct: 419 NLHTLNLAENRLHTLDDKLFNGLYVLSKLTLNNNLISVVEPAVFKNCSDLKELDLSSNQL 478
Query: 374 SMEPECIY--VGFNTMDL 389
+ P + T+DL
Sbjct: 479 NEVPRALQDLAMLRTLDL 496
Score = 206 (77.6 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 77/256 (30%), Positives = 116/256 (45%)
Query: 118 VTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSH 177
V L G ++S + N + F GL L L L +N L+ + L L L+L +
Sbjct: 349 VDLSGNQLTSNHVDNTT---FAGLIR-LIVLNLAHNALTRIDYRTFKELY-FLQILNLRN 403
Query: 178 NQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQ 237
N + +E+ +F L +L+ L+L+ N+L TL L L L L N ++V A +
Sbjct: 404 NSIGHIEDNAFLPLYNLHTLNLAENRLHTLDDKLFNGLYVLSKLTLNNNLISVVEPAVFK 463
Query: 238 GLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCH 297
+ +LDLS N L P + L+ L+ L + NQ + + L +LT L
Sbjct: 464 NCSDLKELDLSSNQLNEV--PRALQDLAMLRTLDLGENQIRTFDNQSFKNLHQLTGLRLI 521
Query: 298 HNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLI 357
NQI + F+ L LS L+LA NRI ++ S L + L NFL +
Sbjct: 522 DNQIGNITVGMFQDLPRLSVLNLAKNRIQSIERGSFDKNFELEAIRLDRNFLADINGVFA 581
Query: 358 TPLKSLQELRLDDNDI 373
T L SL L L +N +
Sbjct: 582 T-LVSLLWLNLSENHL 596
Score = 192 (72.6 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 70/236 (29%), Positives = 116/236 (49%)
Query: 156 SVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPL 215
S +P + A L L+ L L +L +L N +F+GL++L L LS + S+ P
Sbjct: 123 STLPVAVFARLQ-TLEALRLDSCKLLQLPNNAFEGLATLKSLRLSTHN----SE--WGPT 175
Query: 216 VTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLL----AG---PLGPSTVPRLSSLK 268
TL + +L GL+ +TDLDL N L +G P+G V L+ +
Sbjct: 176 RTLELFP-----------DSLGGLKQLTDLDLGDNNLRQLPSGFLCPVGNLQVLNLTRNR 224
Query: 269 VLSIAHNQFSSVRRGALAGL--DKLTSLSCHHNQI-DVLEDHSFRALSTLSHLDLAHNRI 325
+ + F+ + GA +G +L L HN++ + E L L HL+LA+N +
Sbjct: 225 IRTAEQMGFADMNCGAGSGSAGSELQVLDASHNELRSISESWGISRLRRLQHLNLAYNNL 284
Query: 326 VAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIY 381
+SG +LA L++L ++LS+N L L + L K L+E+ L N++ P+ ++
Sbjct: 285 SELSGEALAGLASLRIVNLSNNHLETLPEGLFAGSKELREIHLQQNELYELPKGLF 340
Score = 181 (68.8 bits), Expect = 7.7e-11, Sum P(2) = 7.7e-11
Identities = 71/240 (29%), Positives = 112/240 (46%)
Query: 114 FLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRL 173
F E L L + + + +I D AF+ L + L L L N L + L L +L
Sbjct: 390 FKELYFLQILNLRNNSIGHIEDNAFLPLYN-LHTLNLAENRLHTLDDKLFNGLYV-LSKL 447
Query: 174 DLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVV 233
L++N + +E FK S L LDLS N+L + + L L LR L L N++
Sbjct: 448 TLNNNLISVVEPAVFKNCSDLKELDLSSNQLNEVPR-ALQDLAMLRTLDLGENQIRTFDN 506
Query: 234 AALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTS 293
+ + L +T L L N + G + L L VL++A N+ S+ RG+ +L +
Sbjct: 507 QSFKNLHQLTGLRLIDNQI-GNITVGMFQDLPRLSVLNLAKNRIQSIERGSFDKNFELEA 565
Query: 294 LSCHHNQI-DVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRAL 352
+ N + D+ + F L +L L+L+ N +V A + SNL LD+ N++ AL
Sbjct: 566 IRLDRNFLADI--NGVFATLVSLLWLNLSENHLVWFDYAFIP--SNLKWLDIHGNYIEAL 621
Score = 150 (57.9 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 76/303 (25%), Positives = 140/303 (46%)
Query: 88 LRGLEPDERVSLLDCT---LSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSP 144
L+G + ++++ C+ L T+ F TL L + S +L + + AF GL++
Sbjct: 102 LQGADGSSQLTI-QCSELYLFESTLPVAVFARLQTLEALRLDSCKLLQLPNNAFEGLAT- 159
Query: 145 LQALGL--------PNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNF 196
L++L L P L + P S L L D LDL N L +L + + +L
Sbjct: 160 LKSLRLSTHNSEWGPTRTLELFPDS-LGGLKQLTD-LDLGDNNLRQLPSGFLCPVGNLQV 217
Query: 197 LDLSYNKLMTLSQ------DCLAPLVT----LRVLRLQGNRL-TVSVVAALQGLRSVTDL 245
L+L+ N++ T Q +C A + L+VL N L ++S + LR + L
Sbjct: 218 LNLTRNRIRTAEQMGFADMNCGAGSGSAGSELQVLDASHNELRSISESWGISRLRRLQHL 277
Query: 246 DLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLE 305
+L++N L+ L + L+SL+++++++N ++ G AG +L + N++ L
Sbjct: 278 NLAYNNLS-ELSGEALAGLASLRIVNLSNNHLETLPEGLFAGSKELREIHLQQNELYELP 336
Query: 306 DHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPL--KSL 363
F L L +DL+ N++ + H+ N T L + L + +T + ++
Sbjct: 337 KGLFHRLEQLLVVDLSGNQLTS------NHVDNTTFAGLIRLIVLNLAHNALTRIDYRTF 390
Query: 364 QEL 366
+EL
Sbjct: 391 KEL 393
Score = 150 (57.9 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 70/276 (25%), Positives = 115/276 (41%)
Query: 100 LDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVP 159
L+ + + L K G+ + + + L ++ + A S L+ L L +N L+ VP
Sbjct: 423 LNLAENRLHTLDDKLFNGLYVLSKLTLNNNLISVVEPAVFKNCSDLKELDLSSNQLNEVP 482
Query: 160 TSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLR 219
AL LA L LDL NQ+ +N SFK L L L L N++ ++ L L
Sbjct: 483 R-ALQDLAM-LRTLDLGENQIRTFDNQSFKNLHQLTGLRLIDNQIGNITVGMFQDLPRLS 540
Query: 220 VLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSS 279
VL L NR+ + + + L N LA G L SL L+++ N
Sbjct: 541 VLNLAKNRIQSIERGSFDKNFELEAIRLDRNFLADING--VFATLVSLLWLNLSENHLVW 598
Query: 280 VRRGALAGLDKLTSLSCHHNQIDVLEDH-SFRALSTLSHLDLAHNRIVAVSGASLAHLSN 338
+ L L H N I+ L ++ + + LD +HNRI + S+ +
Sbjct: 599 FDYAFIPS--NLKWLDIHGNYIEALGNYYKLQEEIRVKTLDASHNRITEIGPMSIPNTIE 656
Query: 339 LTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 374
L L +++N + + + +L + L N +S
Sbjct: 657 L--LFINNNLIGNVQPNAFVDKANLARVDLYANQLS 690
Score = 136 (52.9 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 40/131 (30%), Positives = 67/131 (51%)
Query: 98 SLLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSV 157
+++DC T LP + ++ + + + + AFIG + L+AL + + ++
Sbjct: 811 NVVDCGGQQTTELPRRVPMDSSV--VYLDGNNFPVLKNHAFIGRKN-LRALYVNGSQVAA 867
Query: 158 VPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVT 217
+ A LA +L L L+ N+L L F+ LS+L L L N+L T+ LAPL
Sbjct: 868 IQNRTFASLA-SLQLLHLADNKLRTLHGYEFEQLSALRELYLQNNQLTTIENATLAPLAA 926
Query: 218 LRVLRLQGNRL 228
L ++R+ GNRL
Sbjct: 927 LELIRIDGNRL 937
Score = 130 (50.8 bits), Expect = 0.00021, P = 0.00021
Identities = 35/120 (29%), Positives = 61/120 (50%)
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 317
P VP SS V+ + N F ++ A G L +L + +Q+ +++ +F +L++L
Sbjct: 824 PRRVPMDSS--VVYLDGNNFPVLKNHAFIGRKNLRALYVNGSQVAAIQNRTFASLASLQL 881
Query: 318 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEP 377
L LA N++ + G LS L L L +N L + + PL +L+ +R+D N + P
Sbjct: 882 LHLADNKLRTLHGYEFEQLSALRELYLQNNQLTTIENATLAPLAALELIRIDGNRLVTLP 941
Score = 124 (48.7 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 64/258 (24%), Positives = 112/258 (43%)
Query: 59 IKNDLCACDLPHTLR-CTANKS-DLYA--ISESLRGLEPDERVSLLDCTLSNVTVLPGKF 114
+ N+L + P + C+ K DL + ++E R L+ + LD + + +
Sbjct: 449 LNNNLISVVEPAVFKNCSDLKELDLSSNQLNEVPRALQDLAMLRTLDLGENQIRTFDNQS 508
Query: 115 LEGV-TLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRL 173
+ + L GL + ++ NI+ G F L L L L N + + + L+ +
Sbjct: 509 FKNLHQLTGLRLIDNQIGNITVGMFQDLPR-LSVLNLAKNRIQSIERGSFDKNF-ELEAI 566
Query: 174 DLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRL-TVSV 232
L N L + N F L SL +L+LS N L+ P L+ L + GN + +
Sbjct: 567 RLDRNFLADI-NGVFATLVSLLWLNLSENHLVWFDY-AFIPS-NLKWLDIHGNYIEALGN 623
Query: 233 VAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLT 292
LQ V LD SHN + +GP ++P +++++L I +N +V+ A L
Sbjct: 624 YYKLQEEIRVKTLDASHNRIT-EIGPMSIP--NTIELLFINNNLIGNVQPNAFVDKANLA 680
Query: 293 SLSCHHNQIDVLEDHSFR 310
+ + NQ+ L+ R
Sbjct: 681 RVDLYANQLSKLQLQQLR 698
Score = 118 (46.6 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 77/261 (29%), Positives = 117/261 (44%)
Query: 136 GAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLN 195
GA G ++ + G ++LLS VP A +P+ N + NQ + S+ G SS++
Sbjct: 35 GAGTGAAATVSLSGDYSSLLSNVP--AASPVPANPSQPSGPANQC----SWSYNGTSSVH 88
Query: 196 F-LDLSYNK--LMTLSQDCLAPL-VTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNL 251
L L + L D + L + L L + L V+V A LQ L ++ LD S L
Sbjct: 89 CALRLIERQPGLDLQGADGSSQLTIQCSELYLFESTLPVAVFARLQTLEALR-LD-SCKL 146
Query: 252 LAGPLGPSTVPRLSSLKVLSIA-HN-QFSSVRR-----GALAGLDKLTSLSCHHNQIDVL 304
L P + L++LK L ++ HN ++ R +L GL +LT L N + L
Sbjct: 147 LQLP--NNAFEGLATLKSLRLSTHNSEWGPTRTLELFPDSLGGLKQLTDLDLGDNNLRQL 204
Query: 305 EDHSFRALSTLSHLDLAHNRIVAVSGASLAHL----------SNLTTLDLSHNFLRALTQ 354
+ L L+L NRI A + S L LD SHN LR++++
Sbjct: 205 PSGFLCPVGNLQVLNLTRNRIRTAEQMGFADMNCGAGSGSAGSELQVLDASHNELRSISE 264
Query: 355 DL-ITPLKSLQELRLDDNDIS 374
I+ L+ LQ L L N++S
Sbjct: 265 SWGISRLRRLQHLNLAYNNLS 285
Score = 72 (30.4 bits), Expect = 4.6e-17, Sum P(2) = 4.6e-17
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 645 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
S LK L ++ NQ + V R AL L L +L NQI ++ SF N+
Sbjct: 466 SDLKELDLSSNQLNEVPR-ALQDLAMLRTLDLGENQIRTFDNQSFKNL 512
Score = 63 (27.2 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 624 DINRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDV 683
D++ N S +V T L L VL++AHN + + L L L+ +N I
Sbjct: 350 DLSGNQLTSNHVD-NTTFAGLIRLIVLNLAHNALTRIDYRTFKELYFLQILNLRNNSIGH 408
Query: 684 LEDHSF 689
+ED++F
Sbjct: 409 IEDNAF 414
Score = 63 (27.2 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 15/47 (31%), Positives = 27/47 (57%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFS 690
L L+ L++A+N S + ALAGL L ++ +N ++ L + F+
Sbjct: 271 LRRLQHLNLAYNNLSELSGEALAGLASLRIVNLSNNHLETLPEGLFA 317
Score = 60 (26.2 bits), Expect = 8.2e-16, Sum P(2) = 8.2e-16
Identities = 24/93 (25%), Positives = 42/93 (45%)
Query: 602 RTPRNSTIHH-HACFIPVAQQEDDINRNNSDSRYVK------LQATTIL-LSSLKVLSIA 653
R P +S++ + PV + I R N + YV +Q T L+SL++L +A
Sbjct: 826 RVPMDSSVVYLDGNNFPVLKNHAFIGRKNLRALYVNGSQVAAIQNRTFASLASLQLLHLA 885
Query: 654 HNQFSSVRRGALAGLDKLTSLSCHHNQIDVLED 686
N+ ++ L L L +NQ+ +E+
Sbjct: 886 DNKLRTLHGYEFEQLSALRELYLQNNQLTTIEN 918
Score = 60 (26.2 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 20/65 (30%), Positives = 35/65 (53%)
Query: 627 RNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLED 686
RNNS +++ A + L +L L++A N+ ++ GL L+ L+ ++N I V+E
Sbjct: 402 RNNSIG-HIEDNAF-LPLYNLHTLNLAENRLHTLDDKLFNGLYVLSKLTLNNNLISVVEP 459
Query: 687 HSFSN 691
F N
Sbjct: 460 AVFKN 464
Score = 53 (23.7 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 11/46 (23%), Positives = 24/46 (52%)
Query: 647 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L++L++ +N + A L L +L+ N++ L+D F+ +
Sbjct: 396 LQILNLRNNSIGHIEDNAFLPLYNLHTLNLAENRLHTLDDKLFNGL 441
Score = 53 (23.7 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 644 LSSLKVLSIAHNQFSS--VRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L V+ ++ NQ +S V AGL +L L+ HN + ++ +F +
Sbjct: 343 LEQLLVVDLSGNQLTSNHVDNTTFAGLIRLIVLNLAHNALTRIDYRTFKEL 393
Score = 51 (23.0 bits), Expect = 7.1e-15, Sum P(2) = 7.1e-15
Identities = 14/46 (30%), Positives = 22/46 (47%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
L L L + NQ ++ G L +L+ L+ N+I +E SF
Sbjct: 512 LHQLTGLRLIDNQIGNITVGMFQDLPRLSVLNLAKNRIQSIERGSF 557
Score = 48 (22.0 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
L+ L+ L + NQ + + L +LT L NQI
Sbjct: 488 LAMLRTLDLGENQIRTFDNQSFKNLHQLTGLRLIDNQI 525
Score = 48 (22.0 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL 684
LS+L+ L + +NQ +++ LA L L + N++ L
Sbjct: 900 LSALRELYLQNNQLTTIENATLAPLAALELIRIDGNRLVTL 940
Score = 43 (20.2 bits), Expect = 4.8e-14, Sum P(2) = 4.8e-14
Identities = 9/44 (20%), Positives = 24/44 (54%)
Query: 649 VLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
V+ + N F ++ A G L +L + +Q+ +++ +F+++
Sbjct: 833 VVYLDGNNFPVLKNHAFIGRKNLRALYVNGSQVAAIQNRTFASL 876
Score = 38 (18.4 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 9/41 (21%), Positives = 21/41 (51%)
Query: 645 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLE 685
+++++L I +N +V+ A L + + NQ+ L+
Sbjct: 653 NTIELLFINNNLIGNVQPNAFVDKANLARVDLYANQLSKLQ 693
>ZFIN|ZDB-GENE-080327-14 [details] [associations]
symbol:lrrtm4l2 "leucine rich repeat transmembrane
neuronal 4 like 2" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IDA] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-080327-14 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0042802
InterPro:IPR000372 SMART:SM00013 HOVERGEN:HBG052362 EMBL:CU468765
IPI:IPI00876678 UniGene:Dr.110767 IntAct:A8BB35 STRING:A8BB35
Uniprot:A8BB35
Length = 445
Score = 238 (88.8 bits), Expect = 4.8e-17, P = 4.8e-17
Identities = 96/349 (27%), Positives = 152/349 (43%)
Query: 127 SGELKNISDGAFIGLSSPLQALGLP-NNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLEN 185
SG +++ + +G Q L L N+LL ++P A L L L L HN + ++
Sbjct: 45 SGGFQDVPENISLGC----QGLSLRYNSLLLLLPYQ-FAHLN-QLVWLYLDHNSISTVDR 98
Query: 186 TSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDL 245
+F+GL L L LS NK+ L + LR L L N++ V GLR + +L
Sbjct: 99 LAFQGLRRLKELILSSNKIAQLQNGTFETVPNLRNLDLSYNQMQDLVPGHFHGLRKLQNL 158
Query: 246 DL-SHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL 304
L S+N+ + P+ T SL+ L + +N+ ++ R GL +LT L HNQ +
Sbjct: 159 HLRSNNIRSIPV--RTFMECRSLEFLDLGYNRLRTITRTTFLGLLRLTELHLEHNQFSRI 216
Query: 305 EDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQ 364
F L L L L NRI V S L LDLS N ++ L + L +L
Sbjct: 217 NFFLFPRLLNLQALYLQWNRIRTVVQGSPWTWHTLQKLDLSGNEIQILDPAIFRCLPNLH 276
Query: 365 ELRLDDN---DISMEPECIYVGFNTMDLELIYSGVWRHSTLLIPVMLSLCTRSSVVTRYR 421
L L+ N ++S+E ++ +T++L +W S+ + P++ L
Sbjct: 277 TLNLESNKISNVSLEVVSSWISISTINLA---GNIWDCSSSICPLVSWLRNFRGTRDASI 333
Query: 422 YCVV--LIEGSNILDQSALVLGCSEILALVPTLTSQPLSYVTSLRANVT 468
C ++G ++D C E+ + PT L T+ VT
Sbjct: 334 ICSTPKSLQGERVMDAVRNNSVCEEMFTVEPTTELTLLLTTTTTTLYVT 382
Score = 150 (57.9 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 50/169 (29%), Positives = 82/169 (48%)
Query: 112 GKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLD 171
G F L L +S +++++ G F GL LQ L L +N + +P +L+
Sbjct: 123 GTFETVPNLRNLDLSYNQMQDLVPGHFHGLRK-LQNLHLRSNNIRSIPVRTFMECR-SLE 180
Query: 172 RLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVS 231
LDL +N+L + T+F GL L L L +N+ ++ L+ L+ L LQ NR+
Sbjct: 181 FLDLGYNRLRTITRTTFLGLLRLTELHLEHNQFSRINFFLFPRLLNLQALYLQWNRIRTV 240
Query: 232 VVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSV 280
V + ++ LDLS N + L P+ L +L L++ N+ S+V
Sbjct: 241 VQGSPWTWHTLQKLDLSGNEIQ-ILDPAIFRCLPNLHTLNLESNKISNV 288
>MGI|MGI:3045213 [details] [associations]
symbol:Tlr13 "toll-like receptor 13" species:10090 "Mus
musculus" [GO:0002755 "MyD88-dependent toll-like receptor signaling
pathway" evidence=IGI] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0009615 "response to virus"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IDA] [GO:0034178 "toll-like receptor 13 signaling pathway"
evidence=IDA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0043408 "regulation of MAPK cascade"
evidence=IGI] [GO:0045087 "innate immune response" evidence=IDA]
Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR027196 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 MGI:MGI:3045213 GO:GO:0016021 GO:GO:0042803
GO:GO:0005768 GO:GO:0006954 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 GO:GO:0045087 GO:GO:0010008 GO:GO:0009615
GO:GO:0019843 GO:GO:0002755 EMBL:AL672288 GO:GO:0043408
EMBL:CH466564 SUPFAM:SSF52200 EMBL:AY510706 EMBL:AK170044
EMBL:BC117913 EMBL:BC117914 IPI:IPI00342691 RefSeq:NP_991389.1
UniGene:Mm.336203 ProteinModelPortal:Q6R5N8 SMR:Q6R5N8
STRING:Q6R5N8 PhosphoSite:Q6R5N8 PRIDE:Q6R5N8
Ensembl:ENSMUST00000040065 GeneID:279572 KEGG:mmu:279572 CTD:279572
GeneTree:ENSGT00680000099674 HOGENOM:HOG000203220
HOVERGEN:HBG094977 InParanoid:Q6R5N8 OrthoDB:EOG4XGZZS
NextBio:393989 Bgee:Q6R5N8 CleanEx:MM_TLR13 Genevestigator:Q6R5N8
GermOnline:ENSMUSG00000033777 GO:GO:0034178 PANTHER:PTHR24367:SF26
Uniprot:Q6R5N8
Length = 991
Score = 216 (81.1 bits), Expect = 5.1e-17, Sum P(2) = 5.1e-17
Identities = 77/235 (32%), Positives = 122/235 (51%)
Query: 119 TLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHN 178
T H L ++ E++ + +F LS+ L L L N + + A L NL L+L N
Sbjct: 105 TTH-LNLTHNEIQVLPPWSFTNLSA-LVDLRLEWNSIWKIDEGAFRGLE-NLTLLNLVEN 161
Query: 179 QLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLT--VSVVAAL 236
++ + N SF+GLSSL L LS+N++ + +D PL+ L+ L L N ++ ++ A+
Sbjct: 162 KIQSVNN-SFEGLSSLKTLLLSHNQITHIHKDAFTPLIKLKYLSLSRNNISDFSGILEAV 220
Query: 237 QGLRSVTDLDLSHNLLAGPLGPSTVPR-LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLS 295
Q L + LDL++N + L S PR L SL LS N+ + AL+ L LT+LS
Sbjct: 221 QHLPCLERLDLTNNSIMY-LDHS--PRSLVSLTHLSFEGNKLRELNFSALS-LPNLTNLS 276
Query: 296 CHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLR 350
N V+++ + L L L+L+ ++ + S HL NL +DLS+ LR
Sbjct: 277 ASRNGNKVIQNVYLKTLPQLKSLNLS-GTVIKLENLSAKHLQNLRAMDLSNWELR 330
Score = 206 (77.6 bits), Expect = 6.3e-16, Sum P(2) = 6.3e-16
Identities = 69/220 (31%), Positives = 109/220 (49%)
Query: 160 TSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLR 219
T A++ + L+L+HN++ L SF LS+L L L +N + + + L L
Sbjct: 95 TEAISDIPRYTTHLNLTHNEIQVLPPWSFTNLSALVDLRLEWNSIWKIDEGAFRGLENLT 154
Query: 220 VLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQ--- 276
+L L N++ SV + +GL S+ L LSHN + + P L LK LS++ N
Sbjct: 155 LLNLVENKIQ-SVNNSFEGLSSLKTLLLSHNQITHIHKDAFTP-LIKLKYLSLSRNNISD 212
Query: 277 FSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHL 336
FS + A+ L L L +N I L DHS R+L +L+HL N++ ++ ++L+ L
Sbjct: 213 FSGILE-AVQHLPCLERLDLTNNSIMYL-DHSPRSLVSLTHLSFEGNKLRELNFSALS-L 269
Query: 337 SNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISME 376
NLT L S N + + + L L+ L L I +E
Sbjct: 270 PNLTNLSASRNGNKVIQNVYLKTLPQLKSLNLSGTVIKLE 309
Score = 183 (69.5 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 84/319 (26%), Positives = 135/319 (42%)
Query: 68 LPHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPG-KFLEGVTLHGLVIS 126
LP + NK L I+ R + ++ LD + + P F L L +S
Sbjct: 395 LPSLQKLNLNKCQLSFINN--RTWSSLQNLTSLDLSHNKFKSFPDFAFSPLKHLEFLSLS 452
Query: 127 SGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENT 186
+ +++ AF GL + L+ L L + + + PNL+ LDL N + L +
Sbjct: 453 RNPITELNNLAFSGLFA-LKELNLAACWIVTIDRYSFTQF-PNLEVLDLGDNNIRTLNHG 510
Query: 187 SFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLD 246
+F+ L L L LS+N L L + + L LR L L N L+ GL + L
Sbjct: 511 TFRPLKKLQSLILSHNCLKILEPNSFSGLTNLRSLDLMYNSLSYFHEHLFSGLEKLLILK 570
Query: 247 LSHNLLAGPLGPST-VP---RLSSLKVLSIAHNQ--FSSVRRGALAGLDKLTSLSCHHNQ 300
L N + + P +L SLK L++ + V GL L L N
Sbjct: 571 LGFNKITYETTRTLQYPPFIKLKSLKQLNLEGQRHGIQVVPSNFFQGLGSLQELLLGKNP 630
Query: 301 IDVLEDHSFRALSTLSHLDLAH----NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDL 356
L+ H F L L+ LD++ +R + ++ + +L L L L +N L +L D+
Sbjct: 631 SVFLDHHQFDPLINLTKLDISGTKDGDRSLYLNASLFQNLKRLKILRLENNNLESLVPDM 690
Query: 357 ITPLKSLQELRLDDNDISM 375
+ L+SLQ L N++ +
Sbjct: 691 FSSLQSLQVFSLRFNNLKV 709
Score = 173 (66.0 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 81/301 (26%), Positives = 130/301 (43%)
Query: 115 LEGVTLHGLVISSGELKNISDGAFIGLSS-PLQALGLPNNLLSVVPTSALAPLAPNLDRL 173
L+ + L G VI +L+N+S L + L L + L + L P L+ L
Sbjct: 296 LKSLNLSGTVI---KLENLSAKHLQNLRAMDLSNWELRHGHLDMKTVCHLLGNLPKLETL 352
Query: 174 DLSHNQLYKLENTSFKGLSSLNFLDLSYNK-LMTLSQDCLAPLVTLRVLRLQGNRLTVSV 232
N + L FLDL N L+ L+ L +L+ L L +L+
Sbjct: 353 VFQKNVTNAEGIKQLAKCTRLLFLDLGQNSDLIYLNDSEFNALPSLQKLNLNKCQLSFIN 412
Query: 233 VAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLT 292
L+++T LDLSHN + P L L+ LS++ N + + A +GL L
Sbjct: 413 NRTWSSLQNLTSLDLSHNKFKSFPDFAFSP-LKHLEFLSLSRNPITELNNLAFSGLFALK 471
Query: 293 SLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRAL 352
L+ I ++ +SF L LDL N I ++ + L L +L LSHN L+ L
Sbjct: 472 ELNLAACWIVTIDRYSFTQFPNLEVLDLGDNNIRTLNHGTFRPLKKLQSLILSHNCLKIL 531
Query: 353 TQDLITPLKSLQELRLDDNDISMEPECIYVGFNTM-DLELIYSGVWRHST--LLIPVMLS 409
+ + L +L+ L L N +S E ++ G + L+L ++ + +T L P +
Sbjct: 532 EPNSFSGLTNLRSLDLMYNSLSYFHEHLFSGLEKLLILKLGFNKITYETTRTLQYPPFIK 591
Query: 410 L 410
L
Sbjct: 592 L 592
Score = 160 (61.4 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 75/282 (26%), Positives = 118/282 (41%)
Query: 93 PDERVSLLDCTLSNVTVLPGKFLEGV-TLHGLVISSGELKNISDGAFIGLSSPLQALGLP 151
P + + L + + +T L G+ L L +++ + I +F + L+ L L
Sbjct: 442 PLKHLEFLSLSRNPITELNNLAFSGLFALKELNLAACWIVTIDRYSFTQFPN-LEVLDLG 500
Query: 152 NNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDC 211
+N + + PL L L LSHN L LE SF GL++L LDL YN L +
Sbjct: 501 DNNIRTLNHGTFRPLK-KLQSLILSHNCLKILEPNSFSGLTNLRSLDLMYNSLSYFHEHL 559
Query: 212 LAPLVTLRVLRLQGNRLTVSVVAALQ-----GLRSVTDLDLSHNLLAGPLGPSTVPR-LS 265
+ L L +L+L N++T LQ L+S+ L+L + PS + L
Sbjct: 560 FSGLEKLLILKLGFNKITYETTRTLQYPPFIKLKSLKQLNLEGQRHGIQVVPSNFFQGLG 619
Query: 266 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID----VLEDHSFRALSTLSHLDLA 321
SL+ L + N + L LT L + L F+ L L L L
Sbjct: 620 SLQELLLGKNPSVFLDHHQFDPLINLTKLDISGTKDGDRSLYLNASLFQNLKRLKILRLE 679
Query: 322 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSL 363
+N + ++ + L +L L N L+ + Q + LKSL
Sbjct: 680 NNNLESLVPDMFSSLQSLQVFSLRFNNLKVINQSHLKNLKSL 721
Score = 79 (32.9 bits), Expect = 5.1e-17, Sum P(2) = 5.1e-17
Identities = 17/47 (36%), Positives = 26/47 (55%)
Query: 646 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
+L+VL + N ++ G L KL SL HN + +LE +SFS +
Sbjct: 493 NLEVLDLGDNNIRTLNHGTFRPLKKLQSLILSHNCLKILEPNSFSGL 539
Score = 68 (29.0 bits), Expect = 7.1e-16, Sum P(2) = 7.1e-16
Identities = 20/62 (32%), Positives = 29/62 (46%)
Query: 629 NSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHS 688
NSD Y+ + L SL+ L++ Q S + + L LTSL HN+ D +
Sbjct: 381 NSDLIYLN-DSEFNALPSLQKLNLNKCQLSFINNRTWSSLQNLTSLDLSHNKFKSFPDFA 439
Query: 689 FS 690
FS
Sbjct: 440 FS 441
Score = 67 (28.6 bits), Expect = 9.0e-16, Sum P(2) = 9.0e-16
Identities = 14/49 (28%), Positives = 24/49 (48%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L+ L ++HN + + +GL L SL +N + +H FS +
Sbjct: 515 LKKLQSLILSHNCLKILEPNSFSGLTNLRSLDLMYNSLSYFHEHLFSGL 563
Score = 65 (27.9 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 20/68 (29%), Positives = 31/68 (45%)
Query: 625 INRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL 684
+N N ++ T L +L L ++HN+F S A + L L LS N I L
Sbjct: 401 LNLNKCQLSFIN-NRTWSSLQNLTSLDLSHNKFKSFPDFAFSPLKHLEFLSLSRNPITEL 459
Query: 685 EDHSFSNV 692
+ +FS +
Sbjct: 460 NNLAFSGL 467
Score = 61 (26.5 bits), Expect = 3.8e-15, Sum P(2) = 3.8e-15
Identities = 21/86 (24%), Positives = 34/86 (39%)
Query: 609 IHHHACFIPVAQQED-DINRNNSDSRYVKLQATTIL-LSSLKVLSIAHNQFSSVRRGALA 666
+ HH F P+ DI+ R + L A+ L LK+L + +N S+ +
Sbjct: 634 LDHHQ-FDPLINLTKLDISGTKDGDRSLYLNASLFQNLKRLKILRLENNNLESLVPDMFS 692
Query: 667 GLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L S N + V+ N+
Sbjct: 693 SLQSLQVFSLRFNNLKVINQSHLKNL 718
Score = 51 (23.0 bits), Expect = 4.1e-14, Sum P(2) = 4.1e-14
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
L++L+ L + +N S +GL+KL L N+I
Sbjct: 539 LTNLRSLDLMYNSLSYFHEHLFSGLEKLLILKLGFNKI 576
Score = 46 (21.3 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 13/47 (27%), Positives = 24/47 (51%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFS 690
L L+ LS++ N + + A +GL L L+ I ++ +SF+
Sbjct: 443 LKHLEFLSLSRNPITELNNLAFSGLFALKELNLAACWIVTIDRYSFT 489
>TAIR|locus:2016319 [details] [associations]
symbol:TMM "TOO MANY MOUTHS" species:3702 "Arabidopsis
thaliana" [GO:0005739 "mitochondrion" evidence=ISM] [GO:0010103
"stomatal complex morphogenesis" evidence=RCA;IMP] [GO:0007165
"signal transduction" evidence=IC;RCA] [GO:0004872 "receptor
activity" evidence=ISS] [GO:0031225 "anchored to membrane"
evidence=TAS] [GO:0009737 "response to abscisic acid stimulus"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016020 "membrane" evidence=IDA] [GO:0002237 "response to
molecule of bacterial origin" evidence=RCA] [GO:0042127 "regulation
of cell proliferation" evidence=RCA] [GO:0048443 "stamen
development" evidence=RCA] [GO:0008356 "asymmetric cell division"
evidence=IMP] GO:GO:0016021 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0009737 GO:GO:0031225 eggNOG:COG4886 GO:GO:0004872
EMBL:AC009322 GO:GO:0008356 EMBL:AK118563 EMBL:BT005892
IPI:IPI00534137 PIR:C96832 RefSeq:NP_178125.1 UniGene:At.33989
ProteinModelPortal:Q9SSD1 SMR:Q9SSD1 IntAct:Q9SSD1 STRING:Q9SSD1
PRIDE:Q9SSD1 EnsemblPlants:AT1G80080.1 GeneID:844348
KEGG:ath:AT1G80080 TAIR:At1g80080 HOGENOM:HOG000238086
InParanoid:Q9SSD1 OMA:RWHGIEC PhylomeDB:Q9SSD1
ProtClustDB:CLSN2681884 Genevestigator:Q9SSD1 GermOnline:AT1G80080
Uniprot:Q9SSD1
Length = 496
Score = 239 (89.2 bits), Expect = 5.2e-17, P = 5.2e-17
Identities = 96/312 (30%), Positives = 142/312 (45%)
Query: 70 HTLRCTANKSDLY-AISESLRGLEPDERVSLLDCTLSNVT--VLPGKFLEGVTLHGLVIS 126
H + C ++ ++Y +S S L D D S V+ + K L+ + + +
Sbjct: 86 HGIECMPDQDNVYHVVSLSFGALSDDTAFPTCDPQRSYVSESLTRLKHLKALFFYRCLGR 145
Query: 127 SGELKNISDGAFIG-LSSPLQALGL-PNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLE 184
+ + I AF+G L S LQ L L N L +P L L NL LDL N L
Sbjct: 146 APQ--RIP--AFLGRLGSSLQTLVLRENGFLGPIPDE-LGNLT-NLKVLDLHKNHLNGSI 199
Query: 185 NTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTD 244
SF S L LDLS N+L + P L VL L N LT V L S+
Sbjct: 200 PLSFNRFSGLRSLDLSGNRLTGSIPGFVLP--ALSVLDLNQNLLTGPVPPTLTSCGSLIK 257
Query: 245 LDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQ--ID 302
+DLS N + GP+ P ++ RL+ L +L +++N+ S +L GL+ L +L N
Sbjct: 258 IDLSRNRVTGPI-PESINRLNQLVLLDLSYNRLSGPFPSSLQGLNSLQALMLKGNTKFST 316
Query: 303 VLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKS 362
+ +++F+ L L L L++ I SL L++L L L N L +K
Sbjct: 317 TIPENAFKGLKNLMILVLSNTNIQGSIPKSLTRLNSLRVLHLEGNNLTGEIPLEFRDVKH 376
Query: 363 LQELRLDDNDIS 374
L ELRL+DN ++
Sbjct: 377 LSELRLNDNSLT 388
>UNIPROTKB|A5H649 [details] [associations]
symbol:TLR3 "Toll-like receptor 3" species:9913 "Bos
taurus" [GO:0071260 "cellular response to mechanical stimulus"
evidence=IEA] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=IEA] [GO:0046330 "positive
regulation of JNK cascade" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045359 "positive regulation of interferon-beta
biosynthetic process" evidence=IEA] [GO:0045356 "positive
regulation of interferon-alpha biosynthetic process" evidence=IEA]
[GO:0045080 "positive regulation of chemokine biosynthetic process"
evidence=IEA] [GO:0045078 "positive regulation of interferon-gamma
biosynthetic process" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0043123 "positive regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA] [GO:0042346
"positive regulation of NF-kappaB import into nucleus"
evidence=IEA] [GO:0034346 "positive regulation of type III
interferon production" evidence=IEA] [GO:0034123 "positive
regulation of toll-like receptor signaling pathway" evidence=IEA]
[GO:0032760 "positive regulation of tumor necrosis factor
production" evidence=IEA] [GO:0032757 "positive regulation of
interleukin-8 production" evidence=IEA] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IEA] [GO:0032735
"positive regulation of interleukin-12 production" evidence=IEA]
[GO:0032728 "positive regulation of interferon-beta production"
evidence=IEA] [GO:0032722 "positive regulation of chemokine
production" evidence=IEA] [GO:0007252 "I-kappaB phosphorylation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0051607 "defense response
to virus" evidence=IEA] [GO:0050729 "positive regulation of
inflammatory response" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0034138 "toll-like receptor 3 signaling
pathway" evidence=IEA] [GO:0004888 "transmembrane signaling
receptor activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0002756 "MyD88-independent toll-like
receptor signaling pathway" evidence=IEA] InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 GO:GO:0016021 GO:GO:0005737
GO:GO:0006952 GO:GO:0043123 GO:GO:0046330 GO:GO:0045944
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0032722 GO:GO:0032755 GO:GO:0009615 GO:GO:0051092
GO:GO:0032757 GO:GO:0071260 InterPro:IPR000372 SMART:SM00013
GO:GO:0032760 GO:GO:0043330 GO:GO:0032735 GO:GO:0042346
GO:GO:0045078 GO:GO:0032728 GO:GO:0007252 GO:GO:0045080
SUPFAM:SSF52200 GO:GO:0045359 GeneTree:ENSGT00680000099674
GO:GO:0034123 IPI:IPI00713414 UniGene:Bt.12298 HOVERGEN:HBG023181
PANTHER:PTHR24365:SF5 GO:GO:0045356 GO:GO:0034346 EMBL:DAAA02060200
EMBL:EF076741 EMBL:EF076742 EMBL:EF076745 EMBL:EF076746
EMBL:EF076749 STRING:A5H649 Ensembl:ENSBTAT00000011445
InParanoid:A5H649 OMA:WINKTHT Uniprot:A5H649
Length = 904
Score = 226 (84.6 bits), Expect = 5.5e-17, Sum P(2) = 5.5e-17
Identities = 87/298 (29%), Positives = 137/298 (45%)
Query: 91 LEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGL 150
LE + + L + +S++T FL +L L +SS ++K S G F L L L L
Sbjct: 171 LENLQELLLSNNKISSLTPEEFDFLGNSSLKRLELSSNQIKEFSPGCFHTLGE-LSGLSL 229
Query: 151 PNNLLSVVPTSALAPLAPN--LDRLDLSHNQLYKLENTSFKGLSSLNF--LDLSYNKLMT 206
N LS T L N ++ L LS NQL + +T+F GL N LDLS N L
Sbjct: 230 NNAKLSPSLTEKLCLELSNTSIENLSLSSNQLDTISHTTFDGLKQTNLTTLDLSRNSLRV 289
Query: 207 LSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPR--- 263
+ D A L L L L+ N + + GL ++ LDL + + +++P+
Sbjct: 290 MGNDSFAWLPHLEYLSLEYNNIEHLSSRSFYGLSNLRRLDLRRSFTRQSISLTSLPKIDD 349
Query: 264 -----LSSLKVLSIAHNQFSSVRRGALAGLDKLT--SLSCHHNQIDVLEDHSFRALS--T 314
L L+ L++ N F ++R GL +L SLS + + L + +F +L+
Sbjct: 350 FSFQWLKCLEYLNMDDNNFPGIKRNTFTGLVRLKFLSLSNSFSSLRTLTNETFLSLAGCP 409
Query: 315 LSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFL-RALTQDLITPLKSLQELRLDDN 371
L L+L N+I + + + L +L LDL N + + LT L ++ E+ L N
Sbjct: 410 LLLLNLTKNKISKIQSGAFSWLGHLEVLDLGLNEIGQELTGQEWRGLDNIVEIYLSYN 467
Score = 209 (78.6 bits), Expect = 4.0e-15, Sum P(2) = 4.0e-15
Identities = 85/293 (29%), Positives = 139/293 (47%)
Query: 96 RVSLLDCTLSNVTVLPGKFLEGVT-LHGLVISSGELKNISDGAFIGLSSPLQALGLPNNL 154
++++LD ++++ L + + + L L + E+ +SD FI + L L L +N
Sbjct: 77 QLTILDGGFNSISKLEPELCQSLPWLEILNLQHNEISQLSDKTFIFCMN-LTELHLMSNS 135
Query: 155 LSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAP 214
+ + L NL +LDLSHN L + + L +L L LS NK+ +L+ +
Sbjct: 136 IQKIKNDPFKNLK-NLIKLDLSHNGLSSTKLGTQLQLENLQELLLSNNKISSLTPEEFDF 194
Query: 215 L--VTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLS--SLKVL 270
L +L+ L L N++ L ++ L L++ L+ L LS S++ L
Sbjct: 195 LGNSSLKRLELSSNQIKEFSPGCFHTLGELSGLSLNNAKLSPSLTEKLCLELSNTSIENL 254
Query: 271 SIAHNQFSSVRRGALAGLDK--LTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAV 328
S++ NQ ++ GL + LT+L N + V+ + SF L L +L L +N I +
Sbjct: 255 SLSSNQLDTISHTTFDGLKQTNLTTLDLSRNSLRVMGNDSFAWLPHLEYLSLEYNNIEHL 314
Query: 329 SGASLAHLSNLTTLDLSHNFLR---ALTQ-----DLITP-LKSLQELRLDDND 372
S S LSNL LDL +F R +LT D LK L+ L +DDN+
Sbjct: 315 SSRSFYGLSNLRRLDLRRSFTRQSISLTSLPKIDDFSFQWLKCLEYLNMDDNN 367
Score = 206 (77.6 bits), Expect = 8.6e-15, Sum P(2) = 8.6e-15
Identities = 84/304 (27%), Positives = 139/304 (45%)
Query: 96 RVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLL 155
R + DC+ +T +P +T+ L ++ +L+ + F S G N++
Sbjct: 32 RHEVADCSHLKLTQIPDDLPTNITV--LNLTHNQLRRLPPANFTRYSQLTILDGGFNSIS 89
Query: 156 SVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPL 215
+ P L P L+ L+L HN++ +L + +F +L L L N + + D L
Sbjct: 90 KLEPE--LCQSLPWLEILNLQHNEISQLSDKTFIFCMNLTELHLMSNSIQKIKNDPFKNL 147
Query: 216 VTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRL--SSLKVLSIA 273
L L L N L+ + + L ++ +L LS+N ++ L P L SSLK L ++
Sbjct: 148 KNLIKLDLSHNGLSSTKLGTQLQLENLQELLLSNNKISS-LTPEEFDFLGNSSLKRLELS 206
Query: 274 HNQFSSVRRGALAGLDKLTSLSCHHNQIDV-LEDHSFRALSTLS--HLDLAHNRIVAVSG 330
NQ G L +L+ LS ++ ++ L + LS S +L L+ N++ +S
Sbjct: 207 SNQIKEFSPGCFHTLGELSGLSLNNAKLSPSLTEKLCLELSNTSIENLSLSSNQLDTISH 266
Query: 331 ASLAHL--SNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS-MEPECIYVGFNTM 387
+ L +NLTTLDLS N LR + D L L+ L L+ N+I + Y N
Sbjct: 267 TTFDGLKQTNLTTLDLSRNSLRVMGNDSFAWLPHLEYLSLEYNNIEHLSSRSFYGLSNLR 326
Query: 388 DLEL 391
L+L
Sbjct: 327 RLDL 330
Score = 175 (66.7 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 67/276 (24%), Positives = 134/276 (48%)
Query: 126 SSGELKNISDGAFIGLSS-PLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQL-YKL 183
S L+ +++ F+ L+ PL L L N +S + + A + L +L+ LDL N++ +L
Sbjct: 390 SFSSLRTLTNETFLSLAGCPLLLLNLTKNKISKIQSGAFSWLG-HLEVLDLGLNEIGQEL 448
Query: 184 ENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVV----AALQGL 239
++GL ++ + LSYNK + L+ + + +L+ L L+ R+ + V + + L
Sbjct: 449 TGQEWRGLDNIVEIYLSYNKYLELTTNSFTSVPSLQRLMLR--RVALKNVDCSPSPFRPL 506
Query: 240 RSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGA--------LAGLDKL 291
++ LDLS+N +A + + L L++L + HN + + + A L GL L
Sbjct: 507 PNLVILDLSNNNIAN-INDELLKGLEKLEILDLQHNNLARLWKHANPGGPVQFLKGLFHL 565
Query: 292 TSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRA 351
L+ N D + +F+ L L +DL N + + + + +L +L L N + +
Sbjct: 566 HILNLGSNGFDEIPVEAFKDLRELKSIDLGMNNLNILPQSVFDNQVSLKSLSLQKNLITS 625
Query: 352 LTQDLITP-LKSLQ--ELRLDDNDISMEPECIYVGF 384
+ + + P ++L ++R + D + E +V +
Sbjct: 626 VQKTVFGPAFRNLSYLDMRFNPFDCTCESIAWFVNW 661
Score = 147 (56.8 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 70/276 (25%), Positives = 115/276 (41%)
Query: 120 LHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSV--VPTSALAPLA--PNLDRLDL 175
L L + I F GL L+ L L N+ S+ + LA P L L+L
Sbjct: 358 LEYLNMDDNNFPGIKRNTFTGLVR-LKFLSLSNSFSSLRTLTNETFLSLAGCPLL-LLNL 415
Query: 176 SHNQLYKLENTSFKGLSSLNFLDLSYNKL-MTLSQDCLAPLVTLRVLRLQGNRLTVSVVA 234
+ N++ K+++ +F L L LDL N++ L+ L + + L N+
Sbjct: 416 TKNKISKIQSGAFSWLGHLEVLDLGLNEIGQELTGQEWRGLDNIVEIYLSYNKYLELTTN 475
Query: 235 ALQGLRSVTDLDLSHNLLAG-PLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTS 293
+ + S+ L L L PS L +L +L +++N +++ L GL+KL
Sbjct: 476 SFTSVPSLQRLMLRRVALKNVDCSPSPFRPLPNLVILDLSNNNIANINDELLKGLEKLEI 535
Query: 294 LSCHHNQIDVLEDHS-----FRALSTLSHL---DLAHNRIVAVSGASLAHLSNLTTLDLS 345
L HN + L H+ + L L HL +L N + + L L ++DL
Sbjct: 536 LDLQHNNLARLWKHANPGGPVQFLKGLFHLHILNLGSNGFDEIPVEAFKDLRELKSIDLG 595
Query: 346 HNFLRALTQDLITPLKSLQELRLDDNDISMEPECIY 381
N L L Q + SL+ L L N I+ + ++
Sbjct: 596 MNNLNILPQSVFDNQVSLKSLSLQKNLITSVQKTVF 631
Score = 144 (55.7 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 68/296 (22%), Positives = 130/296 (43%)
Query: 72 LRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVT-LHGLVISSGEL 130
L ++N+ D + + + GL+ ++ LD + +++ V+ + L L + +
Sbjct: 254 LSLSSNQLDTISHT-TFDGLK-QTNLTTLDLSRNSLRVMGNDSFAWLPHLEYLSLEYNNI 311
Query: 131 KNISDGAFIGLSSPLQALGLPNNLL-SVVPTSALAPL-------APNLDRLDLSHNQLYK 182
+++S +F GLS+ L+ L L + + ++L + L+ L++ N
Sbjct: 312 EHLSSRSFYGLSN-LRRLDLRRSFTRQSISLTSLPKIDDFSFQWLKCLEYLNMDDNNFPG 370
Query: 183 LENTSFKGLSSLNFLDLS--YNKLMTLSQDCLAPLV--TLRVLRLQGNRLTVSVVAALQG 238
++ +F GL L FL LS ++ L TL+ + L L +L L N+++ A
Sbjct: 371 IKRNTFTGLVRLKFLSLSNSFSSLRTLTNETFLSLAGCPLLLLNLTKNKISKIQSGAFSW 430
Query: 239 LRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHH 298
L + LDL N + L L ++ + +++N++ + + + L L
Sbjct: 431 LGHLEVLDLGLNEIGQELTGQEWRGLDNIVEIYLSYNKYLELTTNSFTSVPSLQRLMLRR 490
Query: 299 NQIDVLE--DHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRAL 352
+ ++ FR L L LDL++N I ++ L L L LDL HN L L
Sbjct: 491 VALKNVDCSPSPFRPLPNLVILDLSNNNIANINDELLKGLEKLEILDLQHNNLARL 546
Score = 141 (54.7 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 64/219 (29%), Positives = 93/219 (42%)
Query: 97 VSLLDCTLSNV-TVLPGKFLEGV-TLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNL 154
+ +LD L+ + L G+ G+ + + +S + ++ +F + S LQ L L
Sbjct: 434 LEVLDLGLNEIGQELTGQEWRGLDNIVEIYLSYNKYLELTTNSFTSVPS-LQRLMLRRVA 492
Query: 155 LSVVPTSA--LAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDC- 211
L V S PL PNL LDLS+N + + + KGL L LDL +N L L +
Sbjct: 493 LKNVDCSPSPFRPL-PNLVILDLSNNNIANINDELLKGLEKLEILDLQHNNLARLWKHAN 551
Query: 212 -------LAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRL 264
L L L +L L N V A + LR + +DL N L L S
Sbjct: 552 PGGPVQFLKGLFHLHILNLGSNGFDEIPVEAFKDLRELKSIDLGMNNL-NILPQSVFDNQ 610
Query: 265 SSLKVLSIAHNQFSSVRRGALA-GLDKLTSLSCHHNQID 302
SLK LS+ N +SV++ L+ L N D
Sbjct: 611 VSLKSLSLQKNLITSVQKTVFGPAFRNLSYLDMRFNPFD 649
Score = 67 (28.6 bits), Expect = 5.5e-17, Sum P(2) = 5.5e-17
Identities = 14/45 (31%), Positives = 25/45 (55%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHS 688
L +L +L +++N +++ L GL+KL L HN + L H+
Sbjct: 506 LPNLVILDLSNNNIANINDELLKGLEKLEILDLQHNNLARLWKHA 550
Score = 56 (24.8 bits), Expect = 5.6e-14, Sum P(2) = 5.6e-14
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLT--SLSCHHNQIDVLEDHSFSNVIG 694
L L+ L++ N F ++R GL +L SLS + + L + +F ++ G
Sbjct: 355 LKCLEYLNMDDNNFPGIKRNTFTGLVRLKFLSLSNSFSSLRTLTNETFLSLAG 407
Score = 53 (23.7 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 13/50 (26%), Positives = 23/50 (46%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNVI 693
L L +L++ N F + A L +L S+ N +++L F N +
Sbjct: 562 LFHLHILNLGSNGFDEIPVEAFKDLRELKSIDLGMNNLNILPQSVFDNQV 611
Score = 51 (23.0 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 17/67 (25%), Positives = 32/67 (47%)
Query: 628 NNSDSRYVKLQATTIL-LSSLKVLSIAHNQFSSVRRGA-LAGLDKLTSLSCHHNQIDVLE 685
N + ++ K+Q+ L L+VL + N+ G GLD + + +N+ L
Sbjct: 414 NLTKNKISKIQSGAFSWLGHLEVLDLGLNEIGQELTGQEWRGLDNIVEIYLSYNKYLELT 473
Query: 686 DHSFSNV 692
+SF++V
Sbjct: 474 TNSFTSV 480
Score = 46 (21.3 bits), Expect = 6.1e-13, Sum P(2) = 6.1e-13
Identities = 18/60 (30%), Positives = 30/60 (50%)
Query: 625 INRNNSDSRYVKLQATTIL-LSS--LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
++ +NS S L T L L+ L +L++ N+ S ++ GA + L L L N+I
Sbjct: 385 LSLSNSFSSLRTLTNETFLSLAGCPLLLLNLTKNKISKIQSGAFSWLGHLEVLDLGLNEI 444
Score = 38 (18.4 bits), Expect = 5.7e-14, Sum P(2) = 5.7e-14
Identities = 12/38 (31%), Positives = 17/38 (44%)
Query: 646 SLKVLSIAHNQFSSVRRGALA-GLDKLTSLSCHHNQID 682
SLK LS+ N +SV++ L+ L N D
Sbjct: 612 SLKSLSLQKNLITSVQKTVFGPAFRNLSYLDMRFNPFD 649
>UNIPROTKB|F1MLX5 [details] [associations]
symbol:LGR4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090190 "positive regulation of branching involved in
ureteric bud morphogenesis" evidence=IEA] [GO:0072282 "metanephric
nephron tubule morphogenesis" evidence=IEA] [GO:0072224
"metanephric glomerulus development" evidence=IEA] [GO:0072202
"cell differentiation involved in metanephros development"
evidence=IEA] [GO:0061290 "canonical Wnt receptor signaling pathway
involved in metanephric kidney development" evidence=IEA]
[GO:0050673 "epithelial cell proliferation" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0030539 "male genitalia
development" evidence=IEA] [GO:0016500 "protein-hormone receptor
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021
GO:GO:0045892 GO:GO:0045893 InterPro:IPR003591 SMART:SM00369
GO:GO:0030539 GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0016500
GeneTree:ENSGT00650000092962 GO:GO:0061290 GO:GO:0072282
OMA:DGYWSDC GO:GO:0072202 GO:GO:0072224 EMBL:DAAA02041144
IPI:IPI00713357 Ensembl:ENSBTAT00000003370 Uniprot:F1MLX5
Length = 1034
Score = 234 (87.4 bits), Expect = 5.8e-17, Sum P(2) = 5.8e-17
Identities = 83/280 (29%), Positives = 126/280 (45%)
Query: 64 CACDLPHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLP-GKFLEGVTLHG 122
C+CD + C+ L A+ E L LLD +++N+T LP F L
Sbjct: 116 CSCDGDRRVDCSGK--GLTAVPEGLSAF-----TQLLDISMNNITQLPEDAFKNFPFLEE 168
Query: 123 LVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYK 182
L ++ +L I A GL L+ L L NN L VP+ A+ L+ +L L L N +
Sbjct: 169 LRLAGNDLSFIHPKALSGLKE-LKVLTLQNNQLKTVPSEAIRGLS-SLQSLRLDANHITS 226
Query: 183 LENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSV 242
+ SF+GL+ L L L N L + L+ L TL+ L L N+++ A L S+
Sbjct: 227 VPEDSFEGLTQLRHLWLDDNSLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSL 286
Query: 243 TDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID 302
L L +N + LG L +L+ L + +N + A+ L L L H N I
Sbjct: 287 VVLHLHNNKIKS-LGQHCFDGLDNLETLDLNYNNLGEFPQ-AIKALPSLKELLFHSNSIS 344
Query: 303 VLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTL 342
V+ D +F L + L N + V ++ +LS L +L
Sbjct: 345 VIPDGAFDGNPLLKTIHLYDNPLSFVGNSAFHNLSELHSL 384
Score = 219 (82.2 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 69/211 (32%), Positives = 105/211 (49%)
Query: 173 LDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSV 232
LD+S N + +L +FK L L L+ N L + L+ L L+VL LQ N+L
Sbjct: 145 LDISMNNITQLPEDAFKNFPFLEELRLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVP 204
Query: 233 VAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLT 292
A++GL S+ L L N + + + L+ L+ L + N + V L+ L L
Sbjct: 205 SEAIRGLSSLQSLRLDANHITS-VPEDSFEGLTQLRHLWLDDNSLTEVPVHPLSNLPTLQ 263
Query: 293 SLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRAL 352
+L+ N+I + D +F LS+L L L +N+I ++ L NL TLDL++N L
Sbjct: 264 ALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIKSLGQHCFDGLDNLETLDLNYNNLGEF 323
Query: 353 TQDLITPLKSLQELRLDDNDISMEPECIYVG 383
Q I L SL+EL N IS+ P+ + G
Sbjct: 324 PQ-AIKALPSLKELLFHSNSISVIPDGAFDG 353
Score = 216 (81.1 bits), Expect = 5.4e-15, Sum P(2) = 5.4e-15
Identities = 71/236 (30%), Positives = 108/236 (45%)
Query: 140 GLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDL 199
GLS+ Q L + N ++ +P A P L+ L L+ N L + + GL L L L
Sbjct: 137 GLSAFTQLLDISMNNITQLPEDAFKNF-PFLEELRLAGNDLSFIHPKALSGLKELKVLTL 195
Query: 200 SYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAG-PLGP 258
N+L T+ + + L +L+ LRL N +T + +GL + L L N L P+ P
Sbjct: 196 QNNQLKTVPSEAIRGLSSLQSLRLDANHITSVPEDSFEGLTQLRHLWLDDNSLTEVPVHP 255
Query: 259 STVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHL 318
+ L +L+ L++A N+ SS+ A L L L H+N+I L H F L L L
Sbjct: 256 --LSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIKSLGQHCFDGLDNLETL 313
Query: 319 DLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 374
DL +N + A A L +L L N + + L+ + L DN +S
Sbjct: 314 DLNYNNLGEFPQAIKA-LPSLKELLFHSNSISVIPDGAFDGNPLLKTIHLYDNPLS 368
Score = 184 (69.8 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 84/323 (26%), Positives = 135/323 (41%)
Query: 71 TLRCTANKSDLYAISE-SLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGE 129
+LR AN + ++ E S GL + L D +L+ V V P L TL L ++ +
Sbjct: 216 SLRLDANH--ITSVPEDSFEGLTQLRHLWLDDNSLTEVPVHPLSNLP--TLQALTLALNK 271
Query: 130 LKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFK 189
+ +I D AF LSS L L L NN + + L NL+ LDL++N L + + K
Sbjct: 272 ISSIPDFAFTNLSS-LVVLHLHNNKIKSLGQHCFDGL-DNLETLDLNYNNLGEFPQ-AIK 328
Query: 190 GLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSH 249
L SL L N + + L+ + L N L+ +A L + L
Sbjct: 329 ALPSLKELLFHSNSISVIPDGAFDGNPLLKTIHLYDNPLSFVGNSAFHNLSELHSL---- 384
Query: 250 NLLAGPLGPSTVPRLSS---LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLED 306
++ G P L+ L+ L++ + SS+ +L +L +N I L
Sbjct: 385 -VIRGASMVQRFPNLTGTVRLESLTLTGTKISSISNNLCQEQKRLRTLDLSYNSIKDLP- 442
Query: 307 HSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQEL 366
SF L + L N+I + + L++L LDLS N + + L S+ L
Sbjct: 443 -SFNGCHALEEISLQRNQIHQIKEDTFQGLTSLKILDLSRNLIHEIDDRAFAKLGSITNL 501
Query: 367 RLDDNDISMEPECIYVGFNTMDL 389
+ N+++ P G N + L
Sbjct: 502 DVSFNELTSFPTEGLNGLNQLKL 524
Score = 169 (64.5 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
Identities = 58/204 (28%), Positives = 99/204 (48%)
Query: 219 RVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFS 278
++L + N +T A + + +L L+ N L+ + P + L LKVL++ +NQ
Sbjct: 143 QLLDISMNNITQLPEDAFKNFPFLEELRLAGNDLSF-IHPKALSGLKELKVLTLQNNQLK 201
Query: 279 SVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSN 338
+V A+ GL L SL N I + + SF L+ L HL L N + V L++L
Sbjct: 202 TVPSEAIRGLSSLQSLRLDANHITSVPEDSFEGLTQLRHLWLDDNSLTEVPVHPLSNLPT 261
Query: 339 LTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI-SMEPECIYVGFNTMD-LELIYS-- 394
L L L+ N + ++ T L SL L L +N I S+ C + G + ++ L+L Y+
Sbjct: 262 LQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIKSLGQHC-FDGLDNLETLDLNYNNL 320
Query: 395 GVWRHSTLLIPVMLSLCTRSSVVT 418
G + + +P + L S+ ++
Sbjct: 321 GEFPQAIKALPSLKELLFHSNSIS 344
Score = 167 (63.8 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 67/273 (24%), Positives = 121/273 (44%)
Query: 100 LDCTLSNVTVLPG-KFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVV 158
L L+ ++ +P F +L L + + ++K++ F GL + L+ L L N L
Sbjct: 265 LTLALNKISSIPDFAFTNLSSLVVLHLHNNKIKSLGQHCFDGLDN-LETLDLNYNNLGEF 323
Query: 159 PTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTL 218
P A+ L P+L L N + + + +F G L + L N L + L L
Sbjct: 324 P-QAIKAL-PSLKELLFHSNSISVIPDGAFDGNPLLKTIHLYDNPLSFVGNSAFHNLSEL 381
Query: 219 RVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFS 278
L ++G + V L G + L L+ ++ + + L+ L +++N
Sbjct: 382 HSLVIRGASM-VQRFPNLTGTVRLESLTLTGTKISS-ISNNLCQEQKRLRTLDLSYNSIK 439
Query: 279 SVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSN 338
+ + G L +S NQI +++ +F+ L++L LDL+ N I + + A L +
Sbjct: 440 DLP--SFNGCHALEEISLQRNQIHQIKEDTFQGLTSLKILDLSRNLIHEIDDRAFAKLGS 497
Query: 339 LTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
+T LD+S N L + + L L +L+L N
Sbjct: 498 ITNLDVSFNELTSFPTE---GLNGLNQLKLVGN 527
Score = 60 (26.2 bits), Expect = 5.8e-17, Sum P(2) = 5.8e-17
Identities = 12/47 (25%), Positives = 23/47 (48%)
Query: 646 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
+L+ +S+ NQ ++ GL L L N I ++D +F+ +
Sbjct: 449 ALEEISLQRNQIHQIKEDTFQGLTSLKILDLSRNLIHEIDDRAFAKL 495
Score = 56 (24.8 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
L+SLK+L ++ N + A A L +T+L N++
Sbjct: 471 LTSLKILDLSRNLIHEIDDRAFAKLGSITNLDVSFNEL 508
Score = 43 (20.2 bits), Expect = 3.4e-15, Sum P(2) = 3.4e-15
Identities = 10/46 (21%), Positives = 22/46 (47%)
Query: 647 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L+ L +++N + + G L +S NQI +++ +F +
Sbjct: 428 LRTLDLSYNSIKDLP--SFNGCHALEEISLQRNQIHQIKEDTFQGL 471
Score = 38 (18.4 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKL 671
L S+ L ++ N+ +S L GL++L
Sbjct: 495 LGSITNLDVSFNELTSFPTEGLNGLNQL 522
Score = 37 (18.1 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 503 KNTNCSRPWVSLKQLPWSPKYQVCATLG 530
K ++ +V+L+ L YQ CA G
Sbjct: 531 KEALAAKDFVNLRSLSVPYAYQCCAFWG 558
>UNIPROTKB|F1MT22 [details] [associations]
symbol:LGR5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048839 "inner ear development" evidence=IEA]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0048839 GO:GO:0016500 GeneTree:ENSGT00650000092962
OMA:FNPHFKE EMBL:DAAA02012288 EMBL:DAAA02012284 EMBL:DAAA02012285
EMBL:DAAA02012286 EMBL:DAAA02012287 IPI:IPI00688410
UniGene:Bt.94743 ProteinModelPortal:F1MT22
Ensembl:ENSBTAT00000017631 NextBio:20873048 Uniprot:F1MT22
Length = 907
Score = 237 (88.5 bits), Expect = 6.1e-17, Sum P(2) = 6.1e-17
Identities = 102/335 (30%), Positives = 144/335 (42%)
Query: 64 CACDLPHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVT-LHG 122
C C+ + + SDL +SE L S LD +++N++ LP L + L
Sbjct: 38 CQCEPDGRMLLRVDCSDL-GLSELPSNLSVF--TSYLDLSMNNISQLPPSPLHSLRFLEE 94
Query: 123 LVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYK 182
L ++ L I GAF GL S L+ L L NN L VPT AL L +L L L N++
Sbjct: 95 LRLAGNALTYIPKGAFAGLYS-LKVLMLQNNHLRQVPTEALQNLR-SLQSLRLDANRISS 152
Query: 183 LENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSV 242
+ + F GL SL L L N L + L L+ + L N++ A L S+
Sbjct: 153 VPPSCFSGLHSLRHLWLDDNALTEIPVQAFRSLSALQAMTLALNKIHHIPDYAFGNLSSL 212
Query: 243 TDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID 302
L L HN LG L SL+ L + +N A+ L L L H N I
Sbjct: 213 VVLHL-HNNRIHSLGKKCFDGLHSLETLDLNYNNLDEFPT-AVRTLSNLKELGFHSNNIK 270
Query: 303 VLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQ--DLITPL 360
+ + +F +L + N I V ++ HL L TL L N +T+ DL T
Sbjct: 271 SIPEKAFVGNPSLITIHFYDNPIQLVGRSAFQHLPELRTLTL--NGASQITEFPDL-TGT 327
Query: 361 KSLQELRLDDNDISMEPECIYVGF-NTMDLELIYS 394
SL+ L L IS P+ + N L+L Y+
Sbjct: 328 ASLESLTLTGAQISSLPQTVCDQLPNLQVLDLSYN 362
Score = 197 (74.4 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 75/241 (31%), Positives = 109/241 (45%)
Query: 151 PNNLLSVVPTSALA-PLAPNLDRLDLSHNQLYKLENTSFKGLSSL-NFLDLSYNKLMTLS 208
P LL P P L R+D S L +L + LS ++LDLS N + L
Sbjct: 27 PGTLLRGCPAHCQCEPDGRMLLRVDCSDLGLSELPSN----LSVFTSYLDLSMNNISQLP 82
Query: 209 QDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLK 268
L L L LRL GN LT A GL S+ L L +N L + + L SL+
Sbjct: 83 PSPLHSLRFLEELRLAGNALTYIPKGAFAGLYSLKVLMLQNNHLR-QVPTEALQNLRSLQ 141
Query: 269 VLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAV 328
L + N+ SSV +GL L L N + + +FR+LS L + LA N+I +
Sbjct: 142 SLRLDANRISSVPPSCFSGLHSLRHLWLDDNALTEIPVQAFRSLSALQAMTLALNKIHHI 201
Query: 329 SGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMD 388
+ +LS+L L L +N + +L + L SL+ L L+ N++ P + N +
Sbjct: 202 PDYAFGNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYNNLDEFPTAVRTLSNLKE 261
Query: 389 L 389
L
Sbjct: 262 L 262
Score = 186 (70.5 bits), Expect = 6.3e-10, Sum P(2) = 6.3e-10
Identities = 71/255 (27%), Positives = 118/255 (46%)
Query: 118 VTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSH 177
V LH + + + ++ F GL S L+ L L N L PT A+ L+ NL L
Sbjct: 213 VVLH---LHNNRIHSLGKKCFDGLHS-LETLDLNYNNLDEFPT-AVRTLS-NLKELGFHS 266
Query: 178 NQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQ 237
N + + +F G SL + N + + + L LR L L G ++ L
Sbjct: 267 NNIKSIPEKAFVGNPSLITIHFYDNPIQLVGRSAFQHLPELRTLTLNGAS-QITEFPDLT 325
Query: 238 GLRSVTDLDLSHNLLAGPLGPSTV-PRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSC 296
G S+ L L+ ++ P TV +L +L+VL +++N + ++ KL +
Sbjct: 326 GTASLESLTLTGAQISSL--PQTVCDQLPNLQVLDLSYNLLEDLPSFSVC--QKLQKIDL 381
Query: 297 HHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDL 356
HN+I ++ +F+ L +L L+LA N+I + + + L +L LDLS N L ++
Sbjct: 382 RHNEIYEIQADTFQQLFSLRSLNLAWNKIAIIDPNAFSTLPSLRKLDLSSNRLSSIP--- 438
Query: 357 ITPLKSLQELRLDDN 371
+T L L L+L N
Sbjct: 439 VTGLHGLTHLKLTGN 453
Score = 179 (68.1 bits), Expect = 8.7e-10, Sum P(2) = 8.7e-10
Identities = 82/312 (26%), Positives = 141/312 (45%)
Query: 71 TLRCTANKSDLYAISES-LRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGE 129
+LR AN+ + ++ S GL + L D L+ + V + L L + ++ +
Sbjct: 142 SLRLDANR--ISSVPPSCFSGLHSLRHLWLDDNALTEIPVQAFRSLSA--LQAMTLALNK 197
Query: 130 LKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFK 189
+ +I D AF LSS L L L NN + + L +L+ LDL++N L + T+ +
Sbjct: 198 IHHIPDYAFGNLSS-LVVLHLHNNRIHSLGKKCFDGLH-SLETLDLNYNNLDEFP-TAVR 254
Query: 190 GLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSH 249
LS+L L N + ++ + +L + N + + +A Q L + L L+
Sbjct: 255 TLSNLKELGFHSNNIKSIPEKAFVGNPSLITIHFYDNPIQLVGRSAFQHLPELRTLTLN- 313
Query: 250 NLLAGPLGPSTVPRLS---SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLED 306
G + P L+ SL+ L++ Q SS+ + L L L +N +LED
Sbjct: 314 ----GASQITEFPDLTGTASLESLTLTGAQISSLPQTVCDQLPNLQVLDLSYN---LLED 366
Query: 307 -HSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQE 365
SF L +DL HN I + + L +L +L+L+ N + + + + L SL++
Sbjct: 367 LPSFSVCQKLQKIDLRHNEIYEIQADTFQQLFSLRSLNLAWNKIAIIDPNAFSTLPSLRK 426
Query: 366 LRLDDNDISMEP 377
L L N +S P
Sbjct: 427 LDLSSNRLSSIP 438
Score = 162 (62.1 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 52/179 (29%), Positives = 90/179 (50%)
Query: 93 PDERVSLLDCTLSNVTVLPGKFLEGV-TLHGLVISSGELKNISDGAFIGLSSPLQALGLP 151
P+ R L+ S +T P L G +L L ++ ++ ++ L + LQ L L
Sbjct: 305 PELRTLTLNGA-SQITEFPD--LTGTASLESLTLTGAQISSLPQTVCDQLPN-LQVLDLS 360
Query: 152 NNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDC 211
NLL +P+ ++ L ++DL HN++Y+++ +F+ L SL L+L++NK+ + +
Sbjct: 361 YNLLEDLPSFSVCQ---KLQKIDLRHNEIYEIQADTFQQLFSLRSLNLAWNKIAIIDPNA 417
Query: 212 LAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHN-LLAGPLGPSTVPRLSSLKV 269
+ L +LR L L NRL+ V L GL T L L+ N L + P L +++
Sbjct: 418 FSTLPSLRKLDLSSNRLSSIPVTGLHGL---THLKLTGNHALQSLISSENFPELKVIEM 473
Score = 55 (24.4 bits), Expect = 6.1e-17, Sum P(2) = 6.1e-17
Identities = 11/46 (23%), Positives = 25/46 (54%)
Query: 647 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L+ + + HN+ ++ L L SL+ N+I +++ ++FS +
Sbjct: 376 LQKIDLRHNEIYEIQADTFQQLFSLRSLNLAWNKIAIIDPNAFSTL 421
Score = 47 (21.6 bits), Expect = 4.2e-16, Sum P(2) = 4.2e-16
Identities = 14/46 (30%), Positives = 24/46 (52%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
L SL+ L ++ N+ SS+ L GL L L+ +H ++ +F
Sbjct: 421 LPSLRKLDLSSNRLSSIPVTGLHGLTHL-KLTGNHALQSLISSENF 465
Score = 41 (19.5 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 642 ILLSSLKVLS---IAHNQFSSVRRGALAGLDKLT 672
+ +SS+K+L A N V LAG+D T
Sbjct: 587 VYISSIKLLIGLIAAVNMLMGVSSAVLAGVDAFT 620
>MGI|MGI:2389180 [details] [associations]
symbol:Lrrtm4 "leucine rich repeat transmembrane neuronal 4"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=ISS] [GO:0030054 "cell junction" evidence=IEA]
[GO:0032281 "alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic
acid selective glutamate receptor complex" evidence=IDA]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0050808 "synapse organization"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
MGI:MGI:2389180 GO:GO:0030054 GO:GO:0045211 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GO:GO:0032281 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00700000104056 HOGENOM:HOG000290681
HOVERGEN:HBG052362 CTD:80059 EMBL:AY182031 EMBL:BC037216
EMBL:AK032470 IPI:IPI00170371 IPI:IPI00269563 RefSeq:NP_848846.3
UniGene:Mm.473274 UniGene:Mm.483425 ProteinModelPortal:Q80XG9
SMR:Q80XG9 STRING:Q80XG9 PRIDE:Q80XG9 Ensembl:ENSMUST00000074662
Ensembl:ENSMUST00000126005 Ensembl:ENSMUST00000126399
Ensembl:ENSMUST00000133918 Ensembl:ENSMUST00000147663 GeneID:243499
KEGG:mmu:243499 UCSC:uc009ckf.2 UCSC:uc012enp.1 InParanoid:Q80XG9
NextBio:385801 Bgee:Q80XG9 CleanEx:MM_LRRTM4 Genevestigator:Q80XG9
GermOnline:ENSMUSG00000052581 Uniprot:Q80XG9
Length = 590
Score = 240 (89.5 bits), Expect = 6.3e-17, P = 6.3e-17
Identities = 83/269 (30%), Positives = 126/269 (46%)
Query: 141 LSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLS 200
+S Q L L N + + ++ A L L L L HN + ++ +F+G+ L L LS
Sbjct: 59 ISGGSQGLSLRFNSIQKLKSNQFAGLN-QLIWLYLDHNYISSVDEDAFQGIRRLKELILS 117
Query: 201 YNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDL-SHNLLAGPLGPS 259
NK+ L P+ LR L L N+L +GLR + L L S++L P+
Sbjct: 118 SNKITYLHNKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPI--R 175
Query: 260 TVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 319
+L L + +N+ S+ R A AGL KL L HNQ + F L L +
Sbjct: 176 VFQDCRNLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIY 235
Query: 320 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS-MEPE 378
L NRI +VS S+L TLDLS N ++A+ L +LQ+L LD N ++ + E
Sbjct: 236 LQWNRIRSVSQGLTWTWSSLHTLDLSGNDIQAIEPGTFKCLPNLQKLNLDSNKLTNVSQE 295
Query: 379 CIYVGFNTMDLELIYSG-VWRHSTLLIPV 406
+ + + + L SG +W S + P+
Sbjct: 296 TVNAWISLISITL--SGNMWECSRSICPL 322
>RGD|1560707 [details] [associations]
symbol:Lrrtm4 "leucine rich repeat transmembrane neuronal 4"
species:10116 "Rattus norvegicus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISO] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0050808 "synapse organization"
evidence=IDA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
RGD:1560707 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0050808
InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290681
HOVERGEN:HBG052362 CTD:80059 EMBL:BC168219 IPI:IPI00388758
RefSeq:NP_001128218.1 UniGene:Rn.140910 GeneID:500219
KEGG:rno:500219 OrthoDB:EOG4MW85Z NextBio:705440
Genevestigator:B4F7C5 Uniprot:B4F7C5
Length = 590
Score = 240 (89.5 bits), Expect = 6.3e-17, P = 6.3e-17
Identities = 83/269 (30%), Positives = 126/269 (46%)
Query: 141 LSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLS 200
+S Q L L N + + ++ A L L L L HN + ++ +F+G+ L L LS
Sbjct: 59 ISGGSQGLSLRFNSIQKLKSNQFAGLN-QLIWLYLDHNYISSVDEDAFQGIRRLKELILS 117
Query: 201 YNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDL-SHNLLAGPLGPS 259
NK+ L P+ LR L L N+L +GLR + L L S++L P+
Sbjct: 118 SNKITYLHNKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPI--R 175
Query: 260 TVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 319
+L L + +N+ S+ R A AGL KL L HNQ + F L L +
Sbjct: 176 VFQDCRNLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIY 235
Query: 320 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS-MEPE 378
L NRI +VS S+L TLDLS N ++A+ L +LQ+L LD N ++ + E
Sbjct: 236 LQWNRIRSVSQGLTWTWSSLHTLDLSGNDIQAIEPGTFKCLPNLQKLNLDSNKLTNVSQE 295
Query: 379 CIYVGFNTMDLELIYSG-VWRHSTLLIPV 406
+ + + + L SG +W S + P+
Sbjct: 296 TVNAWISLISITL--SGNMWECSRSICPL 322
>UNIPROTKB|Q96JA1 [details] [associations]
symbol:LRIG1 "Leucine-rich repeats and immunoglobulin-like
domains protein 1" species:9606 "Homo sapiens" [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
CleanEx:HS_LIG1 Pfam:PF01463 EMBL:AF381545 EMBL:AB050468
EMBL:BC071561 EMBL:BC014276 EMBL:AL117666 IPI:IPI00000775
IPI:IPI00470372 PIR:T17346 RefSeq:NP_056356.2 UniGene:Hs.518055
ProteinModelPortal:Q96JA1 SMR:Q96JA1 IntAct:Q96JA1 STRING:Q96JA1
PhosphoSite:Q96JA1 DMDM:143811415 PaxDb:Q96JA1 PRIDE:Q96JA1
Ensembl:ENST00000273261 Ensembl:ENST00000383703 GeneID:26018
KEGG:hsa:26018 UCSC:uc003dmw.3 UCSC:uc010hoa.3 CTD:26018
GeneCards:GC03M066511 H-InvDB:HIX0003431 HGNC:HGNC:17360 MIM:608868
neXtProt:NX_Q96JA1 PharmGKB:PA38450 HOGENOM:HOG000113380
HOVERGEN:HBG052353 InParanoid:Q96JA1 OMA:ESNGVCP OrthoDB:EOG48PMJN
PhylomeDB:Q96JA1 ChiTaRS:LRIG1 GenomeRNAi:26018 NextBio:47784
Bgee:Q96JA1 CleanEx:HS_LRIG1 Genevestigator:Q96JA1
GermOnline:ENSG00000144749 Uniprot:Q96JA1
Length = 1093
Score = 244 (91.0 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 73/230 (31%), Positives = 112/230 (48%)
Query: 145 LQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKL 204
L L L N + ++ L +L+ L L N + KL + +F GLS ++ L L YN L
Sbjct: 213 LTQLDLNRNRIRLIEGLTFQGLN-SLEVLKLQRNNISKLTDGAFWGLSKMHVLHLEYNSL 271
Query: 205 MTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRL 264
+ ++ L L L L L N + + + +L LS N L L ++ L
Sbjct: 272 VEVNSGSLYGLTALHQLHLSNNSIARIHRKGWSFCQKLHELVLSFNNLTR-LDEESLAEL 330
Query: 265 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID-VLEDHS--FRALSTLSHLDLA 321
SSL VL ++HN S + GA GL L L HN+I +ED S F L +LS L L
Sbjct: 331 SSLSVLRLSHNSISHIAEGAFKGLRSLRVLDLDHNEISGTIEDTSGAFSGLDSLSKLTLF 390
Query: 322 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
N+I +V+ + + L L L+L N +R++ D +K+L+EL + +
Sbjct: 391 GNKIKSVAKRAFSGLEGLEHLNLGGNAIRSVQFDAFVKMKNLKELHISSD 440
Score = 237 (88.5 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 88/326 (26%), Positives = 150/326 (46%)
Query: 67 DLPHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEG-VTLHGLVI 125
DLP+ N ++L A+ SL G VSL + + + G L+ ++L L +
Sbjct: 90 DLPNLQEVYLNNNELTAVP-SL-GAASSHVVSLF-LQHNKIRSVEGSQLKAYLSLEVLDL 146
Query: 126 SSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLEN 185
S + + + F P++ L L N + + A L+ +L L LS N++ +L
Sbjct: 147 SLNNITEVRNTCFPH-GPPIKELNLAGNRIGTLELGAFDGLSRSLLTLRLSKNRITQLPV 205
Query: 186 TSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDL 245
+FK L L LDL+ N++ + L +L VL+LQ N ++ A GL + L
Sbjct: 206 RAFK-LPRLTQLDLNRNRIRLIEGLTFQGLNSLEVLKLQRNNISKLTDGAFWGLSKMHVL 264
Query: 246 DLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLE 305
L +N L + ++ L++L L +++N + + R + KL L N + L+
Sbjct: 265 HLEYNSLV-EVNSGSLYGLTALHQLHLSNNSIARIHRKGWSFCQKLHELVLSFNNLTRLD 323
Query: 306 DHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDL---ITPLKS 362
+ S LS+LS L L+HN I ++ + L +L LDL HN + +D + L S
Sbjct: 324 EESLAELSSLSVLRLSHNSISHIAEGAFKGLRSLRVLDLDHNEISGTIEDTSGAFSGLDS 383
Query: 363 LQELRLDDNDISMEPECIYVGFNTMD 388
L +L L N I + + G ++
Sbjct: 384 LSKLTLFGNKIKSVAKRAFSGLEGLE 409
Score = 221 (82.9 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 80/258 (31%), Positives = 125/258 (48%)
Query: 98 SLLDCTLSN--VTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLL 155
SLL LS +T LP + + L L ++ ++ I F GL+S L+ L L N +
Sbjct: 189 SLLTLRLSKNRITQLPVRAFKLPRLTQLDLNRNRIRLIEGLTFQGLNS-LEVLKLQRNNI 247
Query: 156 SVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPL 215
S + A L+ + L L +N L ++ + S GL++L+ L LS N + + + +
Sbjct: 248 SKLTDGAFWGLS-KMHVLHLEYNSLVEVNSGSLYGLTALHQLHLSNNSIARIHRKGWSFC 306
Query: 216 VTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHN 275
L L L N LT +L L S++ L LSHN ++ + L SL+VL + HN
Sbjct: 307 QKLHELVLSFNNLTRLDEESLAELSSLSVLRLSHNSISH-IAEGAFKGLRSLRVLDLDHN 365
Query: 276 QFSSV---RRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGAS 332
+ S GA +GLD L+ L+ N+I + +F L L HL+L N I +V +
Sbjct: 366 EISGTIEDTSGAFSGLDSLSKLTLFGNKIKSVAKRAFSGLEGLEHLNLGGNAIRSVQFDA 425
Query: 333 LAHLSNLTTLDLSHN-FL 349
+ NL L +S + FL
Sbjct: 426 FVKMKNLKELHISSDSFL 443
Score = 171 (65.3 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 80/254 (31%), Positives = 111/254 (43%)
Query: 154 LLSVVP-TSALAPLAPNL-------DRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLM 205
LL + P T+A P AP D LD L L SLN LSYNKL
Sbjct: 25 LLRLEPVTAAAGPRAPCAAACTCAGDSLDCGGRGLAALPGDLPSWTRSLN---LSYNKLS 81
Query: 206 TLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRS-VTDLDLSHNLLAGPLGPSTVPRL 264
+ L L+ + L N LT V +L S V L L HN + G S +
Sbjct: 82 EIDPAGFEDLPNLQEVYLNNNELTA--VPSLGAASSHVVSLFLQHNKIRSVEG-SQLKAY 138
Query: 265 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALS-TLSHLDLAHN 323
SL+VL ++ N + VR + L+ N+I LE +F LS +L L L+ N
Sbjct: 139 LSLEVLDLSLNNITEVRNTCFPHGPPIKELNLAGNRIGTLELGAFDGLSRSLLTLRLSKN 198
Query: 324 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVG 383
RI + + L LT LDL+ N +R + L SL+ L+L N+IS + + G
Sbjct: 199 RITQLPVRAFK-LPRLTQLDLNRNRIRLIEGLTFQGLNSLEVLKLQRNNISKLTDGAFWG 257
Query: 384 FNTMD-LELIYSGV 396
+ M L L Y+ +
Sbjct: 258 LSKMHVLHLEYNSL 271
Score = 91 (37.1 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 21/46 (45%), Positives = 26/46 (56%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID-VLEDHS 688
LSSL VL ++HN S + GA GL L L HN+I +ED S
Sbjct: 330 LSSLSVLRLSHNSISHIAEGAFKGLRSLRVLDLDHNEISGTIEDTS 375
Score = 81 (33.6 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 644 LSSLKVLSIAHNQFSSV---RRGALAGLDKLTSLSCHHNQIDVLEDHSFSNVIG 694
L SL+VL + HN+ S GA +GLD L+ L+ N+I + +FS + G
Sbjct: 354 LRSLRVLDLDHNEISGTIEDTSGAFSGLDSLSKLTLFGNKIKSVAKRAFSGLEG 407
Score = 57 (25.1 bits), Expect = 9.5e-10, Sum P(2) = 9.5e-10
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
LS + VL + +N V G+L GL L L +N I
Sbjct: 258 LSKMHVLHLEYNSLVEVNSGSLYGLTALHQLHLSNNSI 295
Score = 55 (24.4 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
L SL L++ N+ SV + A +GL+ L L+ N I ++ +F
Sbjct: 381 LDSLSKLTLFGNKIKSVAKRAFSGLEGLEHLNLGGNAIRSVQFDAF 426
Score = 47 (21.6 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 12/46 (26%), Positives = 22/46 (47%)
Query: 647 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L ++ N + + +LA L L+ L HN I + + +F +
Sbjct: 309 LHELVLSFNNLTRLDEESLAELSSLSVLRLSHNSISHIAEGAFKGL 354
>MGI|MGI:2441805 [details] [associations]
symbol:Lgr6 "leucine-rich repeat-containing G
protein-coupled receptor 6" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0004930 "G-protein coupled
receptor activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016500 "protein-hormone
receptor activity" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450
MGI:MGI:2441805 GO:GO:0016021 GO:GO:0005886 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 SMART:SM00013
GO:GO:0016500 HSSP:P21809 GeneTree:ENSGT00650000092962
HOVERGEN:HBG031675 HOGENOM:HOG000231829 CTD:59352 KO:K08399
OrthoDB:EOG4SQWW8 EMBL:AK137380 EMBL:BC026896 EMBL:AY255562
IPI:IPI00321212 RefSeq:NP_001028581.1 UniGene:Mm.279594
ProteinModelPortal:Q3UVD5 SMR:Q3UVD5 IntAct:Q3UVD5
PhosphoSite:Q3UVD5 PRIDE:Q3UVD5 Ensembl:ENSMUST00000044828
GeneID:329252 KEGG:mmu:329252 UCSC:uc007csq.1 InParanoid:Q3UVD5
OMA:AYGKAPS NextBio:398648 Bgee:Q3UVD5 Genevestigator:Q3UVD5
Uniprot:Q3UVD5
Length = 967
Score = 233 (87.1 bits), Expect = 7.9e-17, Sum P(2) = 7.9e-17
Identities = 90/250 (36%), Positives = 125/250 (50%)
Query: 135 DGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSL 194
DG I LS+ LGL SVVP A L P LDLS N L +L+ F L L
Sbjct: 44 DG--IMLSADCSELGL-----SVVP----ADLDPLTAYLDLSMNNLTELQPGLFHHLRFL 92
Query: 195 NFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAG 254
L LS N L + + L +L++L LQ N+L AL L S+ L L NL++
Sbjct: 93 EELRLSGNHLSHIPGQAFSGLHSLKILMLQSNQLRGIPAEALWELPSLQSLRLDANLIS- 151
Query: 255 PLGPS-TVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALS 313
L P + LSSL+ L + N + + AL L L +++ N I + D++F+ L+
Sbjct: 152 -LVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNHIRHIPDYAFQNLT 210
Query: 314 TLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 373
+L L L +NRI V S L NL TLDL++N L+ + T L LQEL +N+I
Sbjct: 211 SLVVLHLHNNRIQHVGTHSFEGLHNLETLDLNYNELQEFPLAIRT-LGRLQELGFHNNNI 269
Query: 374 SMEPECIYVG 383
PE ++G
Sbjct: 270 KAIPEKAFMG 279
Score = 225 (84.3 bits), Expect = 5.9e-16, Sum P(2) = 5.9e-16
Identities = 87/283 (30%), Positives = 130/283 (45%)
Query: 64 CACDLPHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVL-PGKFLEGVTLHG 122
C C + +A+ S+L +S L+P + LD +++N+T L PG F L
Sbjct: 39 CHCQ-EDGIMLSADCSEL-GLSVVPADLDP--LTAYLDLSMNNLTELQPGLFHHLRFLEE 94
Query: 123 LVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYK 182
L +S L +I AF GL S L+ L L +N L +P AL L P+L L L N +
Sbjct: 95 LRLSGNHLSHIPGQAFSGLHS-LKILMLQSNQLRGIPAEALWEL-PSLQSLRLDANLISL 152
Query: 183 LENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSV 242
+ SF+GLSSL L L N L + L L L+ + L N + A Q L S+
Sbjct: 153 VPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNHIRHIPDYAFQNLTSL 212
Query: 243 TDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID 302
L L HN +G + L +L+ L + +N+ A+ L +L L H+N I
Sbjct: 213 VVLHL-HNNRIQHVGTHSFEGLHNLETLDLNYNELQEFPL-AIRTLGRLQELGFHNNNIK 270
Query: 303 VLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLS 345
+ + +F L + N I V ++ +LS L TL L+
Sbjct: 271 AIPEKAFMGSPLLQTIHFYDNPIQFVGRSAFQYLSKLHTLSLN 313
Score = 224 (83.9 bits), Expect = 5.6e-14, Sum P(2) = 5.6e-14
Identities = 88/317 (27%), Positives = 140/317 (44%)
Query: 67 DLP--HTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGV-TLHGL 123
+LP +LR AN L S GL + L D L T +P + L + L +
Sbjct: 136 ELPSLQSLRLDANLISLVP-ERSFEGLSSLRHLWLDDNAL---TEIPVRALNNLPALQAM 191
Query: 124 VISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKL 183
++ +++I D AF L+S L L L NN + V T + L NL+ LDL++N+L +
Sbjct: 192 TLALNHIRHIPDYAFQNLTS-LVVLHLHNNRIQHVGTHSFEGLH-NLETLDLNYNELQEF 249
Query: 184 ENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVT 243
+ + L L L N + + + L+ + N + +A Q L +
Sbjct: 250 P-LAIRTLGRLQELGFHNNNIKAIPEKAFMGSPLLQTIHFYDNPIQFVGRSAFQYLSKLH 308
Query: 244 DLDLSHNLLAGPLGPSTVPRL---SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQ 300
L L+ G P L +SL++L++ + G L +L L HNQ
Sbjct: 309 TLSLN-----GATDIQEFPDLKGTTSLEILTLTRAGIRLLPPGVCQQLPRLRILELSHNQ 363
Query: 301 IDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPL 360
I+ L S L + L HNRI + + + L +L LDLS N +RA+ + + L
Sbjct: 364 IEELP--SLHRCQKLEEIGLRHNRIKEIGADTFSQLGSLQALDLSWNAIRAIHPEAFSTL 421
Query: 361 KSLQELRLDDNDISMEP 377
+SL +L L DN ++ P
Sbjct: 422 RSLVKLDLTDNQLTTLP 438
Score = 151 (58.2 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 61/198 (30%), Positives = 88/198 (44%)
Query: 198 DLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLG 257
D S L + D L PL L L N LT LR + +L LS N L+ G
Sbjct: 51 DCSELGLSVVPAD-LDPLTAY--LDLSMNNLTELQPGLFHHLRFLEELRLSGNHLSHIPG 107
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 317
+ L SLK+L + NQ + AL L L SL N I ++ + SF LS+L H
Sbjct: 108 QA-FSGLHSLKILMLQSNQLRGIPAEALWELPSLQSLRLDANLISLVPERSFEGLSSLRH 166
Query: 318 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEP 377
L L N + + +L +L L + L+ N +R + L SL L L +N I
Sbjct: 167 LWLDDNALTEIPVRALNNLPALQAMTLALNHIRHIPDYAFQNLTSLVVLHLHNNRIQHVG 226
Query: 378 ECIYVGFNTMD-LELIYS 394
+ G + ++ L+L Y+
Sbjct: 227 THSFEGLHNLETLDLNYN 244
Score = 147 (56.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 59/222 (26%), Positives = 97/222 (43%)
Query: 145 LQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKL 204
LQ LG NN + +P A +P L + N + + ++F+ LS L+ L L+
Sbjct: 259 LQELGFHNNNIKAIPEKAFMG-SPLLQTIHFYDNPIQFVGRSAFQYLSKLHTLSLNGATD 317
Query: 205 MTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRL 264
+ D L +L +L L + + Q L + L+LSHN + L PS + R
Sbjct: 318 IQEFPD-LKGTTSLEILTLTRAGIRLLPPGVCQQLPRLRILELSHNQIE-EL-PS-LHRC 373
Query: 265 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 324
L+ + + HN+ + + L L +L N I + +F L +L LDL N+
Sbjct: 374 QKLEEIGLRHNRIKEIGADTFSQLGSLQALDLSWNAIRAIHPEAFSTLRSLVKLDLTDNQ 433
Query: 325 IVAVSGASLAHLSNLTTLDLSHNFL--RALTQDLITPLKSLQ 364
+ + LA L L L L N +A ++D L+ L+
Sbjct: 434 LTTLP---LAGLGGLMHLKLKGNLALSQAFSKDSFPKLRILE 472
Score = 59 (25.8 bits), Expect = 7.9e-17, Sum P(2) = 7.9e-17
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L++L ++HNQ + +L KL + HN+I + +FS +
Sbjct: 351 LPRLRILELSHNQIEELP--SLHRCQKLEEIGLRHNRIKEIGADTFSQL 397
Score = 49 (22.3 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 12/46 (26%), Positives = 23/46 (50%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
L +L+ L + +N+ A+ L +L L H+N I + + +F
Sbjct: 233 LHNLETLDLNYNELQEFPL-AIRTLGRLQELGFHNNNIKAIPEKAF 277
Score = 48 (22.0 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 15/54 (27%), Positives = 25/54 (46%)
Query: 632 SRYVKLQATTIL-LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL 684
+R ++ A T L SL+ L ++ N ++ A + L L L NQ+ L
Sbjct: 384 NRIKEIGADTFSQLGSLQALDLSWNAIRAIHPEAFSTLRSLVKLDLTDNQLTTL 437
Score = 47 (21.6 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 645 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL 684
+SL++L++ + G L +L L HNQI+ L
Sbjct: 328 TSLEILTLTRAGIRLLPPGVCQQLPRLRILELSHNQIEEL 367
Score = 46 (21.3 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 10/46 (21%), Positives = 20/46 (43%)
Query: 647 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L+ + + HN+ + + L L +L N I + +FS +
Sbjct: 376 LEEIGLRHNRIKEIGADTFSQLGSLQALDLSWNAIRAIHPEAFSTL 421
Score = 41 (19.5 bits), Expect = 5.9e-15, Sum P(2) = 5.9e-15
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 663 GALAGLDKLTSLSC 676
GA+AG + L+ +SC
Sbjct: 602 GAMAGANALSGISC 615
>UNIPROTKB|F1NHG5 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0001656
"metanephros development" evidence=IEA] [GO:0001657 "ureteric bud
development" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001933 "negative regulation of
protein phosphorylation" evidence=IEA] [GO:0002042 "cell migration
involved in sprouting angiogenesis" evidence=IEA] [GO:0005095
"GTPase inhibitor activity" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0010593
"negative regulation of lamellipodium assembly" evidence=IEA]
[GO:0010596 "negative regulation of endothelial cell migration"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0021836 "chemorepulsion involved in postnatal olfactory bulb
interneuron migration" evidence=IEA] [GO:0021972 "corticospinal
neuron axon guidance through spinal cord" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0030837
"negative regulation of actin filament polymerization"
evidence=IEA] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0033563 "dorsal/ventral axon guidance"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043116 "negative regulation of vascular
permeability" evidence=IEA] [GO:0043237 "laminin-1 binding"
evidence=IEA] [GO:0043394 "proteoglycan binding" evidence=IEA]
[GO:0045499 "chemorepellent activity" evidence=IEA] [GO:0048495
"Roundabout binding" evidence=IEA] [GO:0048754 "branching
morphogenesis of an epithelial tube" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0050929 "induction of negative chemotaxis" evidence=IEA]
[GO:0051058 "negative regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0051414 "response to cortisol
stimulus" evidence=IEA] [GO:0060763 "mammary duct terminal end bud
growth" evidence=IEA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA] [GO:0071504
"cellular response to heparin" evidence=IEA] [GO:0071672 "negative
regulation of smooth muscle cell chemotaxis" evidence=IEA]
[GO:0071676 "negative regulation of mononuclear cell migration"
evidence=IEA] [GO:0090024 "negative regulation of neutrophil
chemotaxis" evidence=IEA] [GO:0090260 "negative regulation of
retinal ganglion cell axon guidance" evidence=IEA] [GO:0090288
"negative regulation of cellular response to growth factor
stimulus" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005737
GO:GO:0008285 GO:GO:0005615 GO:GO:0009986 GO:GO:0030308
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0008201 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0071504 GO:GO:0005095
GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870 GO:GO:0030837
GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791 Pfam:PF00054
SMART:SM00274 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GO:GO:0010596 GO:GO:0001933
GO:GO:0071676 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 GO:GO:0070100 GO:GO:0090288 GO:GO:0045499
Pfam:PF01463 GO:GO:0010593 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0050929 GO:GO:0090024
GO:GO:0051058 OMA:RHKMFKG EMBL:AADN02015249 EMBL:AADN02015250
EMBL:AADN02015251 EMBL:AADN02015252 EMBL:AADN02015253
EMBL:AADN02015254 EMBL:AADN02015255 EMBL:AADN02015256
EMBL:AADN02015257 EMBL:AADN02015258 EMBL:AADN02015259
EMBL:AADN02015260 EMBL:AADN02015261 EMBL:AADN02015262
EMBL:AADN02015263 EMBL:AADN02015264 EMBL:AADN02015265
EMBL:AADN02015266 EMBL:AADN02015267 EMBL:AADN02015268
EMBL:AADN02015269 EMBL:AADN02015270 EMBL:AADN02015271
IPI:IPI00883181 Ensembl:ENSGALT00000023294 ArrayExpress:F1NHG5
Uniprot:F1NHG5
Length = 1525
Score = 181 (68.8 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 81/336 (24%), Positives = 147/336 (43%)
Query: 67 DLP-HTLRCTANKSDLYAISES-LRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLV 124
++P +T R N +++ I+++ GL + L++ +S T+ G F + L L
Sbjct: 48 NIPRNTERLDLNGNNITRITKTDFAGLRHLRVLQLMENKIS--TIERGAFQDLKELERLR 105
Query: 125 ISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLE 184
++ L+ +S+ F+G + L L L N + +P A A ++ L L +NQ+ +E
Sbjct: 106 LNRNNLQLLSELLFLG-TPKLYRLDLSENQIQAIPRKAFRG-AVDIKNLQLDYNQISCIE 163
Query: 185 NTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSV-VAALQG-LRSV 242
+ +F+ L L L L+ N + LS + LR RL N L +A L LR
Sbjct: 164 DGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQR 223
Query: 243 TDLDLSHNLLAGP--LGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQ 300
+ L + GP L V + + + H F + + + L + +C +N
Sbjct: 224 PRVGL-YTQCMGPAHLRGHNVAEVQKREFVCSGHQSFMAP---SCSVLHCPAACTCSNNI 279
Query: 301 IDV----LEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDL 356
+D L + T++ + L N I + + + L +DLS+N + D
Sbjct: 280 VDCRGKGLTEIPTNLPETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEAAPDA 339
Query: 357 ITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELI 392
L+SL L L N I+ P+ ++ G ++ L L+
Sbjct: 340 FQGLRSLNSLVLYGNKITELPKGLFEGLFSLQLLLL 375
Score = 158 (60.7 bits), Expect = 6.0e-15, Sum P(2) = 6.0e-15
Identities = 44/137 (32%), Positives = 69/137 (50%)
Query: 141 LSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLS 200
L + + L N + V+P A +P L R+DLS+NQ+ + +F+GL SLN L L
Sbjct: 294 LPETITEIRLEQNSIKVIPPGAFSPYK-KLRRIDLSNNQISEAAPDAFQGLRSLNSLVLY 352
Query: 201 YNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPST 260
NK+ L + L +L++L L N++ V A Q L ++ L L N L + T
Sbjct: 353 GNKITELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQ-TIAKGT 411
Query: 261 VPRLSSLKVLSIAHNQF 277
L +++ L +A N F
Sbjct: 412 FSPLRAIQTLHLAQNPF 428
Score = 149 (57.5 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 41/131 (31%), Positives = 68/131 (51%)
Query: 148 LGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTL 207
L L NN SV+ + + P L +++LS+N++ +E +F G S +N L L+ N+L T+
Sbjct: 534 LRLNNNEFSVLEATGIFKKLPQLRKINLSNNKITDIEEGAFDGASGVNELLLTSNRLETV 593
Query: 208 SQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSL 267
L +L+ L L+ NR++ + GL SV L L N + + P + L SL
Sbjct: 594 RDKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRLLSLYDNQIT-TVAPGSFDTLHSL 652
Query: 268 KVLSIAHNQFS 278
L++ N F+
Sbjct: 653 STLNLLANPFN 663
Score = 147 (56.8 bits), Expect = 8.2e-17, Sum P(3) = 8.2e-17
Identities = 54/188 (28%), Positives = 84/188 (44%)
Query: 69 PHTLRCTANKSDLYAISESLRGLEPD--ERVSLLDCTLSNVTVLPGKFLEGVT-LHGLVI 125
P C+ + D + ++ LRG+ + LD +N+T + G+ L L +
Sbjct: 25 PAQCSCSGSTVDCHGLA--LRGVPRNIPRNTERLDLNGNNITRITKTDFAGLRHLRVLQL 82
Query: 126 SSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLA-PNLDRLDLSHNQLYKLE 184
++ I GAF L L+ L L N L ++ S L L P L RLDLS NQ+ +
Sbjct: 83 MENKISTIERGAFQDLKE-LERLRLNRNNLQLL--SELLFLGTPKLYRLDLSENQIQAIP 139
Query: 185 NTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTD 244
+F+G + L L YN++ + L L VL L N +T VA+ + +
Sbjct: 140 RKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRT 199
Query: 245 LDL-SHNL 251
L S+NL
Sbjct: 200 FRLHSNNL 207
Score = 139 (54.0 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 78/319 (24%), Positives = 129/319 (40%)
Query: 67 DLPHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEG-VTLHGLVI 125
DL R N+++L +SE L P ++ LD + + + +P K G V + L +
Sbjct: 97 DLKELERLRLNRNNLQLLSELLFLGTP--KLYRLDLSENQIQAIPRKAFRGAVDIKNLQL 154
Query: 126 SSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLEN 185
++ I DGAF L L+ L L NN ++ + ++ + P L L N LY +
Sbjct: 155 DYNQISCIEDGAFRALRD-LEVLTLNNNNITRLSVASFNHM-PKLRTFRLHSNNLYC--D 210
Query: 186 TSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLR---VLRLQGNRLTVS-----VVAALQ 237
LS L + L C+ P LR V +Q S + +
Sbjct: 211 CHLAWLSDW----LRQRPRVGLYTQCMGP-AHLRGHNVAEVQKREFVCSGHQSFMAPSCS 265
Query: 238 GLRSVTDLDLSHNLL-AGPLGPSTVP-RL-SSLKVLSIAHNQFSSVRRGALAGLDKLTSL 294
L S+N++ G + +P L ++ + + N + GA + KL +
Sbjct: 266 VLHCPAACTCSNNIVDCRGKGLTEIPTNLPETITEIRLEQNSIKVIPPGAFSPYKKLRRI 325
Query: 295 SCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQ 354
+NQI +F+ L +L+ L L N+I + L +L L L+ N + L
Sbjct: 326 DLSNNQISEAAPDAFQGLRSLNSLVLYGNKITELPKGLFEGLFSLQLLLLNANKINCLRV 385
Query: 355 DLITPLKSLQELRLDDNDI 373
D L +L L L DN +
Sbjct: 386 DAFQDLHNLNLLSLYDNKL 404
Score = 130 (50.8 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 46/214 (21%), Positives = 91/214 (42%)
Query: 175 LSHNQLYKLENTSFK-GLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVS-- 231
L++ ++ ++++ F+ F+ + + LS DC A L R +G + S
Sbjct: 459 LANKRIGQIKSKKFRCSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQ 518
Query: 232 -VVAALQGLRSVT-DLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLD 289
+ + T +L L++N + +L L+ +++++N+ + + GA G
Sbjct: 519 KLNKIPDHIPQYTAELRLNNNEFSVLEATGIFKKLPQLRKINLSNNKITDIEEGAFDGAS 578
Query: 290 KLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFL 349
+ L N+++ + D F+ L +L L L NR+ V S LS++ L L N +
Sbjct: 579 GVNELLLTSNRLETVRDKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRLLSLYDNQI 638
Query: 350 RALTQDLITPLKSLQELRLDDNDISMEPECIYVG 383
+ L SL L L N + ++G
Sbjct: 639 TTVAPGSFDTLHSLSTLNLLANPFNCNCHLAWLG 672
Score = 129 (50.5 bits), Expect = 8.2e-17, Sum P(3) = 8.2e-17
Identities = 37/131 (28%), Positives = 61/131 (46%)
Query: 241 SVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQ 300
++T++ L N + + P L+ + +++NQ S A GL L SL + N+
Sbjct: 297 TITEIRLEQNSIK-VIPPGAFSPYKKLRRIDLSNNQISEAAPDAFQGLRSLNSLVLYGNK 355
Query: 301 IDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPL 360
I L F L +L L L N+I + + L NL L L N L+ + + +PL
Sbjct: 356 ITELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPL 415
Query: 361 KSLQELRLDDN 371
+++Q L L N
Sbjct: 416 RAIQTLHLAQN 426
Score = 124 (48.7 bits), Expect = 6.0e-15, Sum P(2) = 6.0e-15
Identities = 37/96 (38%), Positives = 53/96 (55%)
Query: 287 GLDK-LTSLSCHHNQIDVLEDHSFRALSTLSHL---DLAHNRIVAVSGASLAHLSNLTTL 342
G+ K +T L NQ ++ + LS HL DL++NRI +S S ++++ L TL
Sbjct: 747 GIPKDVTELYLDGNQFTLVP----KELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTL 802
Query: 343 DLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPE 378
LS+N LR + LKSL+ L L NDIS+ PE
Sbjct: 803 ILSYNRLRCIPARTFDGLKSLRLLSLHGNDISVVPE 838
Score = 124 (48.7 bits), Expect = 9.4e-10, Sum P(2) = 9.4e-10
Identities = 33/103 (32%), Positives = 53/103 (51%)
Query: 221 LRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSV 280
L L GN+ T+ V L + +T +DLS+N ++ L + ++ L L +++N+ +
Sbjct: 755 LYLDGNQFTL-VPKELSNYKHLTLIDLSNNRIS-TLSNQSFSNMTQLLTLILSYNRLRCI 812
Query: 281 RRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 323
GL L LS H N I V+ + +F LS LSHL + N
Sbjct: 813 PARTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGAN 855
Score = 118 (46.6 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 78/302 (25%), Positives = 124/302 (41%)
Query: 84 ISESLRGLEPD-ERVSLLDCTLSNVTVLPGK-FLEGVTLHGLVISSGELKNISDGAFIGL 141
IS RG D + + L +N+ +L FL L+ L +S +++ I AF G
Sbjct: 87 ISTIERGAFQDLKELERLRLNRNNLQLLSELLFLGTPKLYRLDLSENQIQAIPRKAFRG- 145
Query: 142 SSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSY 201
+ ++ L L N +S + A L +L+ L L++N + +L SF + L L
Sbjct: 146 AVDIKNLQLDYNQISCIEDGAFRALR-DLEVLTLNNNNITRLSVASFNHMPKLRTFRLHS 204
Query: 202 NKLMTLSQDC-LAPLVT-LRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPS 259
N L DC LA L LR G A L+G +V ++ + +G
Sbjct: 205 NNLYC---DCHLAWLSDWLRQRPRVGLYTQCMGPAHLRG-HNVAEVQKREFVCSGHQS-F 259
Query: 260 TVPRLSSLK--VLSIAHNQFSSVRRGALAGL-----DKLTSLSCHHNQIDVLEDHSFRAL 312
P S L N R L + + +T + N I V+ +F
Sbjct: 260 MAPSCSVLHCPAACTCSNNIVDCRGKGLTEIPTNLPETITEIRLEQNSIKVIPPGAFSPY 319
Query: 313 STLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDND 372
L +DL++N+I + + L +L +L L N + L + L L SLQ L L+ N
Sbjct: 320 KKLRRIDLSNNQISEAAPDAFQGLRSLNSLVLYGNKITELPKGLFEGLFSLQLLLLNANK 379
Query: 373 IS 374
I+
Sbjct: 380 IN 381
Score = 109 (43.4 bits), Expect = 9.4e-10, Sum P(2) = 9.4e-10
Identities = 50/170 (29%), Positives = 76/170 (44%)
Query: 64 CACDL--PHTLRCTANKSDLYAISESLRGLEPDERVSLL-DCTLSN--VTVLP--GKFLE 116
C DL P RC D ++ L + PD + L+N +VL G F +
Sbjct: 496 CFADLACPEKCRCEGTTVD--CSNQKLNKI-PDHIPQYTAELRLNNNEFSVLEATGIFKK 552
Query: 117 GVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLS 176
L + +S+ ++ +I +GAF G S + L L +N L V L +L L L
Sbjct: 553 LPQLRKINLSNNKITDIEEGAFDGASGVNELL-LTSNRLETVRDKMFKGLE-SLKTLMLR 610
Query: 177 HNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGN 226
N++ + N SF GLSS+ L L N++ T++ L +L L L N
Sbjct: 611 SNRVSCVGNDSFTGLSSVRLLSLYDNQITTVAPGSFDTLHSLSTLNLLAN 660
Score = 98 (39.6 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 29/116 (25%), Positives = 54/116 (46%)
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 317
P +P+ + L + NQF+ V + L+ LT + +N+I L + SF ++ L
Sbjct: 745 PKGIPK--DVTELYLDGNQFTLVPK-ELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLT 801
Query: 318 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 373
L L++NR+ + + L +L L L N + + + L +L L + N +
Sbjct: 802 LILSYNRLRCIPARTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPL 857
Score = 89 (36.4 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 26/101 (25%), Positives = 49/101 (48%)
Query: 294 LSCHHNQIDVLEDHS-FRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRAL 352
L ++N+ VLE F+ L L ++L++N+I + + S + L L+ N L +
Sbjct: 534 LRLNNNEFSVLEATGIFKKLPQLRKINLSNNKITDIEEGAFDGASGVNELLLTSNRLETV 593
Query: 353 TQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELIY 393
+ L+SL+ L L N +S + G +++ L +Y
Sbjct: 594 RDKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRLLSLY 634
Score = 72 (30.4 bits), Expect = 8.2e-17, Sum P(3) = 8.2e-17
Identities = 17/77 (22%), Positives = 39/77 (50%)
Query: 618 VAQQEDDINRNNSDSRYVKLQATTIL--LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLS 675
+ Q ++ NN++ + L+AT I L L+ +++++N+ + + GA G + L
Sbjct: 527 IPQYTAELRLNNNE--FSVLEATGIFKKLPQLRKINLSNNKITDIEEGAFDGASGVNELL 584
Query: 676 CHHNQIDVLEDHSFSNV 692
N+++ + D F +
Sbjct: 585 LTSNRLETVRDKMFKGL 601
Score = 69 (29.3 bits), Expect = 1.7e-16, Sum P(3) = 1.7e-16
Identities = 17/49 (34%), Positives = 24/49 (48%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L SLK L + N+ S V + GL + LS + NQI + SF +
Sbjct: 601 LESLKTLMLRSNRVSCVGNDSFTGLSSVRLLSLYDNQITTVAPGSFDTL 649
Score = 66 (28.3 bits), Expect = 2.1e-10, Sum P(3) = 2.1e-10
Identities = 27/101 (26%), Positives = 45/101 (44%)
Query: 303 VLEDH-SFRALS-TLSHLDLA---HNRIVAVSGASLAHL-SNL----TTLDLSHNFLRAL 352
V H SF A S ++ H A N IV G L + +NL T + L N ++ +
Sbjct: 252 VCSGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLTEIPTNLPETITEIRLEQNSIKVI 311
Query: 353 TQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELIY 393
+P K L+ + L +N IS + G +++ ++Y
Sbjct: 312 PPGAFSPYKKLRRIDLSNNQISEAAPDAFQGLRSLNSLVLY 352
Score = 60 (26.2 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 13/49 (26%), Positives = 26/49 (53%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
++ L L +++N+ + GL L LS H N I V+ + +F+++
Sbjct: 796 MTQLLTLILSYNRLRCIPARTFDGLKSLRLLSLHGNDISVVPEGAFNDL 844
Score = 57 (25.1 bits), Expect = 2.8e-15, Sum P(3) = 2.8e-15
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 655 NQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
NQF+ V + L+ LT + +N+I L + SFSN+
Sbjct: 760 NQFTLVPK-ELSNYKHLTLIDLSNNRISTLSNQSFSNM 796
Score = 57 (25.1 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 19/75 (25%), Positives = 35/75 (46%)
Query: 315 LSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 374
++ L L N+ V L++ +LT +DLS+N + L+ + + L L L N +
Sbjct: 752 VTELYLDGNQFTLVP-KELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLR 810
Query: 375 MEPECIYVGFNTMDL 389
P + G ++ L
Sbjct: 811 CIPARTFDGLKSLRL 825
Score = 54 (24.1 bits), Expect = 5.6e-15, Sum P(3) = 5.6e-15
Identities = 12/32 (37%), Positives = 22/32 (68%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLS 675
LSS+++LS+ NQ ++V G+ L L++L+
Sbjct: 625 LSSVRLLSLYDNQITTVAPGSFDTLHSLSTLN 656
Score = 54 (24.1 bits), Expect = 5.6e-15, Sum P(3) = 5.6e-15
Identities = 12/48 (25%), Positives = 24/48 (50%)
Query: 645 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
S + L + N+ +VR GL+ L +L N++ + + SF+ +
Sbjct: 578 SGVNELLLTSNRLETVRDKMFKGLESLKTLMLRSNRVSCVGNDSFTGL 625
Score = 54 (24.1 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFS 690
L SL++L + N+ + +R A L L LS + N++ + +FS
Sbjct: 367 LFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFS 413
Score = 53 (23.7 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 14/46 (30%), Positives = 22/46 (47%)
Query: 647 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L+ + +++NQ S A GL L SL + N+I L F +
Sbjct: 322 LRRIDLSNNQISEAAPDAFQGLRSLNSLVLYGNKITELPKGLFEGL 367
Score = 50 (22.7 bits), Expect = 9.4e-10, Sum P(2) = 9.4e-10
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L SL L + N+ + + +G GL L L + N+I+ L +F ++
Sbjct: 343 LRSLNSLVLYGNKITELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDL 391
Score = 47 (21.6 bits), Expect = 2.9e-14, Sum P(3) = 2.9e-14
Identities = 12/46 (26%), Positives = 24/46 (52%)
Query: 650 LSIAHNQFSSVRR-GALAGLDKLTSLSCHHNQIDVLEDHSFSNVIG 694
L + +N+FS + G L +L ++ +N+I +E+ +F G
Sbjct: 534 LRLNNNEFSVLEATGIFKKLPQLRKINLSNNKITDIEEGAFDGASG 579
Score = 40 (19.1 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 11/52 (21%), Positives = 21/52 (40%)
Query: 641 TILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
T L ++ + + N + GA + KL + +NQI +F +
Sbjct: 292 TNLPETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEAAPDAFQGL 343
>FB|FBgn0038504 [details] [associations]
symbol:Sur-8 "Sur-8" species:7227 "Drosophila melanogaster"
[GO:0017016 "Ras GTPase binding" evidence=ISS] [GO:0000164 "protein
phosphatase type 1 complex" evidence=IEA] [GO:0046579 "positive
regulation of Ras protein signal transduction" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027036 PROSITE:PS51450
EMBL:AE014297 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
InterPro:IPR025875 Pfam:PF12799 GeneTree:ENSGT00600000084236
OMA:LPHGIGN PANTHER:PTHR23155:SF38 ChiTaRS:SHOC2 EMBL:AY128499
EMBL:BT003235 RefSeq:NP_650620.3 RefSeq:NP_732231.2
UniGene:Dm.13957 ProteinModelPortal:Q9VEK6 SMR:Q9VEK6 STRING:Q9VEK6
PaxDb:Q9VEK6 PRIDE:Q9VEK6 EnsemblMetazoa:FBtr0083447
EnsemblMetazoa:FBtr0083448 EnsemblMetazoa:FBtr0333933 GeneID:42093
KEGG:dme:Dmel_CG5407 UCSC:CG5407-RA CTD:42093 FlyBase:FBgn0038504
InParanoid:Q8MQM0 OrthoDB:EOG4C867K PhylomeDB:Q9VEK6
GenomeRNAi:42093 NextBio:827133 Bgee:Q9VEK6 Uniprot:Q9VEK6
Length = 641
Score = 232 (86.7 bits), Expect = 8.6e-17, Sum P(2) = 8.6e-17
Identities = 83/310 (26%), Positives = 145/310 (46%)
Query: 75 TANKSD-LYAISESLRGLEP--DERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGELK 131
T KS + A + ++ L+ DE + LD + S++TV+P E V L L + S ++
Sbjct: 137 TTKKSKPIQADQDVIKALQRCRDEGIKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIG 196
Query: 132 NISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGL 191
+ IG L+ L L N L+ +P S L LDL HN+L ++ ++ L
Sbjct: 197 QLPPE--IGCLVSLRNLALNENSLTSLPESLQN--CSQLKVLDLRHNKLAEIPPVIYR-L 251
Query: 192 SSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNL 251
SL L L +N++ ++ D L LV L +L L+ N++ + +A+ L ++T LD+SHN
Sbjct: 252 RSLTTLYLRFNRITAVADD-LRQLVNLTMLSLRENKIR-ELGSAIGALVNLTTLDVSHNH 309
Query: 252 LAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRA 311
L P + +L L + HN+ + ++ L L L +N++ + + +
Sbjct: 310 LEHL--PEDIGNCVNLSALDLQHNELLDIP-DSIGNLKSLVRLGMRYNRLSSVPA-TLKN 365
Query: 312 LSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
++ ++ N I + LA LS LTT+ LS N + ++ + L+ N
Sbjct: 366 CKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSRNQFASYPTGGPAQFTNVYSINLEHN 425
Query: 372 DISMEPECIY 381
I P I+
Sbjct: 426 RIDKIPYGIF 435
Score = 214 (80.4 bits), Expect = 8.5e-15, Sum P(2) = 8.5e-15
Identities = 89/329 (27%), Positives = 152/329 (46%)
Query: 68 LPHTLRCTANKSDLYAISESLRGLEPDER--VSLLDCTLS--NVTVLPGKFLEGVTLHGL 123
+P T++ + ++LY S + L P+ VSL + L+ ++T LP L L
Sbjct: 175 IPSTVKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLTSLPESLQNCSQLKVL 234
Query: 124 VISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKL 183
+ +L I + L S L L L N ++ V L L NL L L N++ +L
Sbjct: 235 DLRHNKLAEIPPVIY-RLRS-LTTLYLRFNRITAVADD-LRQLV-NLTMLSLRENKIREL 290
Query: 184 ENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVT 243
++ L +L LD+S+N L L +D + V L L LQ N L + + ++ L+S+
Sbjct: 291 -GSAIGALVNLTTLDVSHNHLEHLPED-IGNCVNLSALDLQHNEL-LDIPDSIGNLKSLV 347
Query: 244 DLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDV 303
L + +N L+ P+T+ S+ ++ N + + G LA L LT+++ NQ
Sbjct: 348 RLGMRYNRLSSV--PATLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSRNQFAS 405
Query: 304 LEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSL 363
+ + ++L HNRI + + LT L++ N L AL D+ T + ++
Sbjct: 406 YPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWV-NM 464
Query: 364 QELRLDDNDISMEPECIYVGFNTMDLELI 392
EL L N + P+ I N +LE++
Sbjct: 465 VELNLATNALQKLPDDI---MNLQNLEIL 490
Score = 166 (63.5 bits), Expect = 9.2e-09, P = 9.2e-09
Identities = 59/227 (25%), Positives = 108/227 (47%)
Query: 145 LQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKL 204
+ + N ++ +P LA L+ L + LS NQ +++ ++L +N++
Sbjct: 369 MDEFNVEGNGITQLPDGMLASLS-GLTTITLSRNQFASYPTGGPAQFTNVYSINLEHNRI 427
Query: 205 MTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRL 264
+ + L L ++ N LT ++ + ++ +L+L+ N L L P + L
Sbjct: 428 DKIPYGIFSRAKGLTKLNMKENMLT-ALPLDIGTWVNMVELNLATNALQ-KL-PDDIMNL 484
Query: 265 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 324
+L++L +++N + + L KL L N+I+VL H L L L L N+
Sbjct: 485 QNLEILILSNNMLKKIPN-TIGNLRKLRILDLEENRIEVLP-HEIGLLHELQRLILQTNQ 542
Query: 325 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
I + S+ HL NLT L +S N L+ L ++ I L+SL+ L ++ N
Sbjct: 543 ITMLP-RSIGHLGNLTHLSVSENNLQFLPEE-IGSLESLENLYINQN 587
Score = 54 (24.1 bits), Expect = 8.6e-17, Sum P(2) = 8.6e-17
Identities = 15/60 (25%), Positives = 29/60 (48%)
Query: 625 INRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL 684
+ N + + KL + L +L++L +++N + + L KL L N+I+VL
Sbjct: 465 VELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPN-TIGNLRKLRILDLEENRIEVL 523
Score = 41 (19.5 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 8/35 (22%), Positives = 16/35 (45%)
Query: 650 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL 684
+++ HN+ + G + LT L+ N + L
Sbjct: 420 INLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTAL 454
>MGI|MGI:2442298 [details] [associations]
symbol:Lingo2 "leucine rich repeat and Ig domain containing
2" species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 MGI:MGI:2442298 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR025875 Pfam:PF12799
HSSP:Q15772 eggNOG:NOG278536 GeneTree:ENSGT00690000101682
HOGENOM:HOG000246971 HOVERGEN:HBG057546 CTD:158038 OMA:DQDSGMY
OrthoDB:EOG4NS3B7 EMBL:AK035778 EMBL:AK045639 EMBL:AK141568
EMBL:BC090619 EMBL:BC145692 IPI:IPI00341267 RefSeq:NP_001159471.1
RefSeq:NP_001159472.1 RefSeq:NP_001159473.1 RefSeq:NP_780725.2
UniGene:Mm.132507 ProteinModelPortal:Q3URE9 SMR:Q3URE9
PhosphoSite:Q3URE9 PaxDb:Q3URE9 PRIDE:Q3URE9
Ensembl:ENSMUST00000065173 Ensembl:ENSMUST00000098151
Ensembl:ENSMUST00000108122 Ensembl:ENSMUST00000108124
Ensembl:ENSMUST00000164772 GeneID:242384 KEGG:mmu:242384
InParanoid:Q3URE9 NextBio:385317 Bgee:Q3URE9 CleanEx:MM_LINGO2
Genevestigator:Q3URE9 Uniprot:Q3URE9
Length = 606
Score = 239 (89.2 bits), Expect = 8.6e-17, P = 8.6e-17
Identities = 90/322 (27%), Positives = 154/322 (47%)
Query: 64 CACDLPH-TLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNV-TVLPGKFLEGVTLH 121
C C + ++ C ++ L AI E + P E +LD + + + ++ P +F+ L
Sbjct: 32 CECSAQNKSVSC--HRRRLLAIPEGI----PIE-TKILDLSKNRLKSINPEEFISYPLLE 84
Query: 122 GLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLY 181
+ +S + N+ GAF L + L++L L N L +VP L+ NL +LD+S N++
Sbjct: 85 EIDLSDNIIANVEPGAFNNLFN-LRSLRLKGNRLKLVPLGVFTGLS-NLTKLDISENKIV 142
Query: 182 KLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRS 241
L + F+ L +L L++ N L+ +S + L++L L L+ LT AL LRS
Sbjct: 143 ILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEKCNLTAVPTEALSHLRS 202
Query: 242 VTDLDLSH-NLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVR-RGALAGLDKLTSLSCHHN 299
+ L L H N+ P+ RL LK L I + + +L GL+ LTSLS +
Sbjct: 203 LIALHLKHLNINNMPV--YAFKRLFHLKNLEIDYWPLLDLMPANSLYGLN-LTSLSITNT 259
Query: 300 QIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITP 359
+ + +F+ L L+HL+L++N I + + L L L + LR +
Sbjct: 260 NLSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQELHIVGAQLRTIEPHSFQG 319
Query: 360 LKSLQELRLDDNDISMEPECIY 381
L+ L+ L + N + E ++
Sbjct: 320 LRFLRVLNVSQNLLETLEENVF 341
Score = 203 (76.5 bits), Expect = 7.6e-13, P = 7.6e-13
Identities = 74/288 (25%), Positives = 133/288 (46%)
Query: 95 ERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNL 154
E + L D ++NV PG F L L + LK + G F GLS+ L L + N
Sbjct: 84 EEIDLSDNIIANVE--PGAFNNLFNLRSLRLKGNRLKLVPLGVFTGLSN-LTKLDISENK 140
Query: 155 LSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAP 214
+ ++ L NL L++ N L + + +F GL SL L L L + + L+
Sbjct: 141 IVILLDYMFQDLH-NLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEKCNLTAVPTEALSH 199
Query: 215 LVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAH 274
L +L L L+ + V A + L + +L++ + L + +++ L+ L LSI +
Sbjct: 200 LRSLIALHLKHLNINNMPVYAFKRLFHLKNLEIDYWPLLDLMPANSLYGLN-LTSLSITN 258
Query: 275 NQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLA 334
S+V A L LT L+ +N I +E F L L L + ++ + S
Sbjct: 259 TNLSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQELHIVGAQLRTIEPHSFQ 318
Query: 335 HLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYV 382
L L L++S N L L +++ + ++L+ L +++N ++ + +++
Sbjct: 319 GLRFLRVLNVSQNLLETLEENVFSSPRALEVLSINNNPLACDCRLLWL 366
Score = 162 (62.1 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 52/181 (28%), Positives = 87/181 (48%)
Query: 214 PLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIA 273
P+ T ++L L NRL + ++DLS N++A + P L +L+ L +
Sbjct: 56 PIET-KILDLSKNRLKSINPEEFISYPLLEEIDLSDNIIAN-VEPGAFNNLFNLRSLRLK 113
Query: 274 HNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASL 333
N+ V G GL LT L N+I +L D+ F+ L L L++ N +V +S +
Sbjct: 114 GNRLKLVPLGVFTGLSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRAF 173
Query: 334 AHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVG-FNTMDLELI 392
+ L +L L L L A+ + ++ L+SL L L +I+ P + F+ +LE+
Sbjct: 174 SGLLSLEQLTLEKCNLTAVPTEALSHLRSLIALHLKHLNINNMPVYAFKRLFHLKNLEID 233
Query: 393 Y 393
Y
Sbjct: 234 Y 234
Score = 151 (58.2 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 65/213 (30%), Positives = 106/213 (49%)
Query: 67 DLPHTLRCT-ANKSDLYAISE-SLRGLEPDERVSLLDCTLSNVTVLPGKFLEGV-TLHGL 123
DL H L+ +DL IS + GL E+++L C N+T +P + L + +L L
Sbjct: 151 DL-HNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEKC---NLTAVPTEALSHLRSLIAL 206
Query: 124 VISSGELKNISDGAFIGLSSPLQALGLPN-NLLSVVPTSALAPLAPNLDRLDLSHNQLYK 182
+ + N+ AF L L+ L + LL ++P ++L L NL L +++ L
Sbjct: 207 HLKHLNINNMPVYAFKRLFH-LKNLEIDYWPLLDLMPANSLYGL--NLTSLSITNTNLST 263
Query: 183 LENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSV 242
+ +FK L L L+LSYN + T+ + L+ L+ L + G +L + QGLR +
Sbjct: 264 VPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQELHIVGAQLRTIEPHSFQGLRFL 323
Query: 243 TDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHN 275
L++S NLL L + +L+VLSI +N
Sbjct: 324 RVLNVSQNLLE-TLEENVFSSPRALEVLSINNN 355
Score = 136 (52.9 bits), Expect = 9.3e-07, Sum P(2) = 9.3e-07
Identities = 57/246 (23%), Positives = 113/246 (45%)
Query: 232 VVAALQGLRSVTD-LDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDK 290
++A +G+ T LDLS N L + P L+ + ++ N ++V GA L
Sbjct: 48 LLAIPEGIPIETKILDLSKNRLKS-INPEEFISYPLLEEIDLSDNIIANVEPGAFNNLFN 106
Query: 291 LTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLR 350
L SL N++ ++ F LS L+ LD++ N+IV + L NL +L++ N L
Sbjct: 107 LRSLRLKGNRLKLVPLGVFTGLSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLV 166
Query: 351 ALTQDLITPLKSLQELRLDDNDISMEP-ECIYVGFNTMDLELIYSGVWRHSTLLIPVMLS 409
++ + L SL++L L+ +++ P E + + + L L + + + + +
Sbjct: 167 YISHRAFSGLLSLEQLTLEKCNLTAVPTEALSHLRSLIALHLKHLNI---NNMPVYAFKR 223
Query: 410 LCTRSSVVTRYRYCVVLIEGSNILDQSALVLGCSEI-LALVPTLTSQPLSYVTSLRANVT 468
L ++ Y + L+ +++ + L + L+ VP L + L Y+T L +
Sbjct: 224 LFHLKNLEIDYWPLLDLMPANSLYGLNLTSLSITNTNLSTVPFLAFKHLVYLTHLNLSYN 283
Query: 469 GLGTVQ 474
+ T++
Sbjct: 284 PISTIE 289
Score = 58 (25.5 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 12/43 (27%), Positives = 23/43 (53%)
Query: 650 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L++++N S++ G + L +L L Q+ +E HSF +
Sbjct: 278 LNLSYNPISTIEAGMFSDLIRLQELHIVGAQLRTIEPHSFQGL 320
Score = 56 (24.8 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 18/57 (31%), Positives = 29/57 (50%)
Query: 637 LQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNVI 693
+ A ++ +L LSI + S+V A L LT L+ +N I +E FS++I
Sbjct: 241 MPANSLYGLNLTSLSITNTNLSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLI 297
Score = 49 (22.3 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 14/48 (29%), Positives = 24/48 (50%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSN 691
L L+ L I Q ++ + GL L L+ N ++ LE++ FS+
Sbjct: 296 LIRLQELHIVGAQLRTIEPHSFQGLRFLRVLNVSQNLLETLEENVFSS 343
>MGI|MGI:2443955 [details] [associations]
symbol:Lrig3 "leucine-rich repeats and immunoglobulin-like
domains 3" species:10090 "Mus musculus" [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:2443955 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101816 InterPro:IPR025875 Pfam:PF12799
HOGENOM:HOG000113380 HOVERGEN:HBG052353 CTD:121227 OMA:SHHQFVT
OrthoDB:EOG4K6G3K EMBL:AY505341 EMBL:BC065142 EMBL:AK044994
EMBL:AK078783 EMBL:AK129481 IPI:IPI00399981 RefSeq:NP_796126.4
UniGene:Mm.275586 PDB:3SO5 PDBsum:3SO5 ProteinModelPortal:Q6P1C6
SMR:Q6P1C6 PhosphoSite:Q6P1C6 PRIDE:Q6P1C6
Ensembl:ENSMUST00000074807 GeneID:320398 KEGG:mmu:320398
UCSC:uc007hhc.2 InParanoid:Q6P1C6 NextBio:396650 Bgee:Q6P1C6
Genevestigator:Q6P1C6 GermOnline:ENSMUSG00000020105 Uniprot:Q6P1C6
Length = 1117
Score = 230 (86.0 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 90/295 (30%), Positives = 139/295 (47%)
Query: 84 ISESLRGLEPDERVSLLDCTLSNVTVL-PGKFLE-GVTLHGLVISSGELKNISDGAFIGL 141
ISE LR P ++ L + V+ + PG F TL L ++ + I F
Sbjct: 157 ISE-LRTAFPPLQLKYLYINNNRVSSMEPGYFDNLASTLLVLKLNRNRISAIPPKMF--K 213
Query: 142 SSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSY 201
LQ L L N + V L L L + N + KL + +F GLS++ L L +
Sbjct: 214 LPQLQHLELNRNKIKNVDGLTFQGLGA-LKSLKMQRNGVTKLMDGAFWGLSNMEVLQLDH 272
Query: 202 NKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTV 261
N L +++ L L+ LR L L N + A + + +++LDL+ N L+ L S+
Sbjct: 273 NNLTEITKGWLYGLLMLRELHLSQNAINRISPDAWEFCQKLSELDLTFNHLSR-LDDSSF 331
Query: 262 PRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID-VLEDHS--FRALSTLSHL 318
LS L L I +N+ S + A GL L +L +N+I +ED S F L L L
Sbjct: 332 LGLSLLNALHIGNNKVSYIADCAFRGLTSLKTLDLRNNEISWTIEDMSGAFSGLDRLRQL 391
Query: 319 DLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 373
L NRI +++ + A L L LDLS N + +L + + +K LQ+L L+ + +
Sbjct: 392 ILQGNRIRSITKKAFAGLDTLEHLDLSGNAIMSLQSNAFSQMKKLQQLHLNTSSL 446
Score = 223 (83.6 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 82/291 (28%), Positives = 129/291 (44%)
Query: 99 LLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVV 158
LLDC+ + LP VT L +S L I + L S LQ + L NN L +
Sbjct: 57 LLDCSRRRLVRLPDPLPAWVTR--LDLSHNRLSFIQTSSLSHLQS-LQEVKLNNNELETI 113
Query: 159 PTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTL 218
P L ++ N+ +L L+ N + K+ + SL LDLS N + L + PL L
Sbjct: 114 PN--LGSISANIRQLSLAGNAIDKILPEQLEAFQSLETLDLSNNNISEL-RTAFPPL-QL 169
Query: 219 RVLRLQGNRLTVSVVAALQGLRS-VTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQF 277
+ L + NR++ L S + L L+ N ++ P + +L L+ L + N+
Sbjct: 170 KYLYINNNRVSSMEPGYFDNLASTLLVLKLNRNRISAI--PPKMFKLPQLQHLELNRNKI 227
Query: 278 SSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLS 337
+V GL L SL N + L D +F LS + L L HN + ++ L L
Sbjct: 228 KNVDGLTFQGLGALKSLKMQRNGVTKLMDGAFWGLSNMEVLQLDHNNLTEITKGWLYGLL 287
Query: 338 NLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMD 388
L L LS N + ++ D + L EL L N +S + ++G + ++
Sbjct: 288 MLRELHLSQNAINRISPDAWEFCQKLSELDLTFNHLSRLDDSSFLGLSLLN 338
Score = 215 (80.7 bits), Expect = 9.7e-14, P = 9.7e-14
Identities = 75/278 (26%), Positives = 132/278 (47%)
Query: 81 LYAISESLRGLEP---DERVS---LLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNIS 134
LY + + +EP D S +L + ++ +P K + L L ++ ++KN+
Sbjct: 172 LYINNNRVSSMEPGYFDNLASTLLVLKLNRNRISAIPPKMFKLPQLQHLELNRNKIKNVD 231
Query: 135 DGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSL 194
F GL + L++L + N ++ + A L+ N++ L L HN L ++ GL L
Sbjct: 232 GLTFQGLGA-LKSLKMQRNGVTKLMDGAFWGLS-NMEVLQLDHNNLTEITKGWLYGLLML 289
Query: 195 NFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAG 254
L LS N + +S D L L L N L+ ++ GL + L + +N ++
Sbjct: 290 RELHLSQNAINRISPDAWEFCQKLSELDLTFNHLSRLDDSSFLGLSLLNALHIGNNKVSY 349
Query: 255 PLGPSTVPRLSSLKVLSIAHNQFS-SVR--RGALAGLDKLTSLSCHHNQIDVLEDHSFRA 311
+ L+SLK L + +N+ S ++ GA +GLD+L L N+I + +F
Sbjct: 350 -IADCAFRGLTSLKTLDLRNNEISWTIEDMSGAFSGLDRLRQLILQGNRIRSITKKAFAG 408
Query: 312 LSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFL 349
L TL HLDL+ N I+++ + + + L L L+ + L
Sbjct: 409 LDTLEHLDLSGNAIMSLQSNAFSQMKKLQQLHLNTSSL 446
Score = 193 (73.0 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 72/254 (28%), Positives = 119/254 (46%)
Query: 145 LQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSS-LNFLDLSYNK 203
L+ L L NN +S + T A PL L L +++N++ +E F L+S L L L+ N+
Sbjct: 147 LETLDLSNNNISELRT-AFPPL--QLKYLYINNNRVSSMEPGYFDNLASTLLVLKLNRNR 203
Query: 204 LMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPR 263
+ + + L L+ L L N++ QGL ++ L + N + L
Sbjct: 204 ISAIPPK-MFKLPQLQHLELNRNKIKNVDGLTFQGLGALKSLKMQRNGVT-KLMDGAFWG 261
Query: 264 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 323
LS+++VL + HN + + +G L GL L L N I+ + ++ LS LDL N
Sbjct: 262 LSNMEVLQLDHNNLTEITKGWLYGLLMLRELHLSQNAINRISPDAWEFCQKLSELDLTFN 321
Query: 324 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVG 383
+ + +S LS L L + +N + + L SL+ L L +N+IS E +
Sbjct: 322 HLSRLDDSSFLGLSLLNALHIGNNKVSYIADCAFRGLTSLKTLDLRNNEISWTIEDMSGA 381
Query: 384 FNTMDL--ELIYSG 395
F+ +D +LI G
Sbjct: 382 FSGLDRLRQLILQG 395
Score = 70 (29.7 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 21/67 (31%), Positives = 33/67 (49%)
Query: 627 RNNSDSRYVK-LQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLE 685
RNN S ++ + L L+ L + N+ S+ + A AGLD L L N I L+
Sbjct: 367 RNNEISWTIEDMSGAFSGLDRLRQLILQGNRIRSITKKAFAGLDTLEHLDLSGNAIMSLQ 426
Query: 686 DHSFSNV 692
++FS +
Sbjct: 427 SNAFSQM 433
Score = 62 (26.9 bits), Expect = 7.1e-16, Sum P(2) = 7.1e-16
Identities = 19/55 (34%), Positives = 29/55 (52%)
Query: 636 KLQATTIL-LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID-VLEDHS 688
+L ++ L LS L L I +N+ S + A GL L +L +N+I +ED S
Sbjct: 325 RLDDSSFLGLSLLNALHIGNNKVSYIADCAFRGLTSLKTLDLRNNEISWTIEDMS 379
>RGD|1560339 [details] [associations]
symbol:Lgr6 "leucine-rich repeat-containing G protein-coupled
receptor 6" species:10116 "Rattus norvegicus" [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016500 "protein-hormone receptor
activity" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS51450 RGD:1560339 GO:GO:0016021
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 GeneTree:ENSGT00650000092962 CTD:59352
KO:K08399 OrthoDB:EOG4SQWW8 OMA:AYGKAPS IPI:IPI00213568
RefSeq:XP_001062538.1 RefSeq:XP_573455.1 ProteinModelPortal:D3ZJU9
Ensembl:ENSRNOT00000006969 GeneID:498233 KEGG:rno:498233
UCSC:RGD:1560339 NextBio:699115 Uniprot:D3ZJU9
Length = 965
Score = 234 (87.4 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 89/283 (31%), Positives = 132/283 (46%)
Query: 64 CACDLPHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVL-PGKFLEGVTLHG 122
C C + +A+ S+L +SE L+P + LD +++N+T L PG F L
Sbjct: 39 CHCQ-EDGIMLSADCSEL-GLSEVPADLDP--LTAYLDLSMNNLTELQPGLFHHLRFLEE 94
Query: 123 LVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYK 182
L +S L +I AF GL S L+ L L +N L +P AL L P+L L L N +
Sbjct: 95 LRLSGNHLSHIPRQAFSGLHS-LKILMLQSNQLRGIPAEALWEL-PSLQSLRLDANLISL 152
Query: 183 LENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSV 242
+ SF+GLSSL L L N L + L L L+ + L NR+ A Q L S+
Sbjct: 153 VPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNRIRHIPDYAFQNLTSL 212
Query: 243 TDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID 302
L L HN +G + L +L+ L + +N+ A+ L +L L H+N I
Sbjct: 213 VVLHL-HNNRIQHVGTHSFEGLHNLETLDLNYNELQEFPV-AIRTLGRLQELGFHNNNIK 270
Query: 303 VLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLS 345
+ + +F L + N I V ++ +LS L TL L+
Sbjct: 271 AIPEKAFMGNPLLQTIHFYDNPIQFVGRSAFQYLSKLHTLSLN 313
Score = 231 (86.4 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 89/250 (35%), Positives = 126/250 (50%)
Query: 135 DGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSL 194
DG I LS+ LGL S VP A L P LDLS N L +L+ F L L
Sbjct: 44 DG--IMLSADCSELGL-----SEVP----ADLDPLTAYLDLSMNNLTELQPGLFHHLRFL 92
Query: 195 NFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAG 254
L LS N L + + + L +L++L LQ N+L AL L S+ L L NL++
Sbjct: 93 EELRLSGNHLSHIPRQAFSGLHSLKILMLQSNQLRGIPAEALWELPSLQSLRLDANLIS- 151
Query: 255 PLGPS-TVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALS 313
L P + LSSL+ L + N + + AL L L +++ N+I + D++F+ L+
Sbjct: 152 -LVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNRIRHIPDYAFQNLT 210
Query: 314 TLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 373
+L L L +NRI V S L NL TLDL++N L+ + T L LQEL +N+I
Sbjct: 211 SLVVLHLHNNRIQHVGTHSFEGLHNLETLDLNYNELQEFPVAIRT-LGRLQELGFHNNNI 269
Query: 374 SMEPECIYVG 383
PE ++G
Sbjct: 270 KAIPEKAFMG 279
Score = 227 (85.0 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 89/317 (28%), Positives = 141/317 (44%)
Query: 67 DLP--HTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGV-TLHGL 123
+LP +LR AN L S GL + L D L T +P + L + L +
Sbjct: 136 ELPSLQSLRLDANLISLVP-ERSFEGLSSLRHLWLDDNAL---TEIPVRALNNLPALQAM 191
Query: 124 VISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKL 183
++ +++I D AF L+S L L L NN + V T + L NL+ LDL++N+L +
Sbjct: 192 TLALNRIRHIPDYAFQNLTS-LVVLHLHNNRIQHVGTHSFEGLH-NLETLDLNYNELQEF 249
Query: 184 ENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVT 243
+ + L L L N + + + L+ + N + +A Q L +
Sbjct: 250 P-VAIRTLGRLQELGFHNNNIKAIPEKAFMGNPLLQTIHFYDNPIQFVGRSAFQYLSKLH 308
Query: 244 DLDLSHNLLAGPLGPSTVPRL---SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQ 300
L L+ G P L +SL++L++ + G L +L L HNQ
Sbjct: 309 TLSLN-----GATDIQEFPDLKGTTSLEILTLTRAGIRLLPAGMCQQLPRLRILELSHNQ 363
Query: 301 IDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPL 360
I+ L S L + L HNRI + + + LS+L LDLS N +RA+ + + L
Sbjct: 364 IEELP--SLHRCQKLEEIGLQHNRIWEIGADTFSQLSSLQALDLSWNAIRAIHPEAFSTL 421
Query: 361 KSLQELRLDDNDISMEP 377
+SL +L L DN ++ P
Sbjct: 422 RSLVKLDLTDNQLTTLP 438
Score = 146 (56.5 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 56/184 (30%), Positives = 82/184 (44%)
Query: 212 LAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLS 271
L PL L L N LT LR + +L LS N L+ + L SLK+L
Sbjct: 64 LDPLTAY--LDLSMNNLTELQPGLFHHLRFLEELRLSGNHLSH-IPRQAFSGLHSLKILM 120
Query: 272 IAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGA 331
+ NQ + AL L L SL N I ++ + SF LS+L HL L N + +
Sbjct: 121 LQSNQLRGIPAEALWELPSLQSLRLDANLISLVPERSFEGLSSLRHLWLDDNALTEIPVR 180
Query: 332 SLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMD-LE 390
+L +L L + L+ N +R + L SL L L +N I + G + ++ L+
Sbjct: 181 ALNNLPALQAMTLALNRIRHIPDYAFQNLTSLVVLHLHNNRIQHVGTHSFEGLHNLETLD 240
Query: 391 LIYS 394
L Y+
Sbjct: 241 LNYN 244
Score = 143 (55.4 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 59/222 (26%), Positives = 96/222 (43%)
Query: 145 LQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKL 204
LQ LG NN + +P A P L + N + + ++F+ LS L+ L L+
Sbjct: 259 LQELGFHNNNIKAIPEKAFMG-NPLLQTIHFYDNPIQFVGRSAFQYLSKLHTLSLNGATD 317
Query: 205 MTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRL 264
+ D L +L +L L + + Q L + L+LSHN + L PS + R
Sbjct: 318 IQEFPD-LKGTTSLEILTLTRAGIRLLPAGMCQQLPRLRILELSHNQIE-EL-PS-LHRC 373
Query: 265 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 324
L+ + + HN+ + + L L +L N I + +F L +L LDL N+
Sbjct: 374 QKLEEIGLQHNRIWEIGADTFSQLSSLQALDLSWNAIRAIHPEAFSTLRSLVKLDLTDNQ 433
Query: 325 IVAVSGASLAHLSNLTTLDLSHNFL--RALTQDLITPLKSLQ 364
+ + LA L L L L N +A ++D L+ L+
Sbjct: 434 LTTLP---LAGLGGLMHLKLKGNLALSQAFSKDSFPKLRILE 472
Score = 126 (49.4 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 46/157 (29%), Positives = 77/157 (49%)
Query: 115 LEGVT-LHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRL 173
L+G T L L ++ ++ + G L L+ L L +N + +P+ L+ +
Sbjct: 324 LKGTTSLEILTLTRAGIRLLPAGMCQQLPR-LRILELSHNQIEELPS---LHRCQKLEEI 379
Query: 174 DLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVV 233
L HN+++++ +F LSSL LDLS+N + + + + L +L L L N+LT +
Sbjct: 380 GLQHNRIWEIGADTFSQLSSLQALDLSWNAIRAIHPEAFSTLRSLVKLDLTDNQLTTLPL 439
Query: 234 AALQGLRSVTDLDLSHNL-LAGPLGPSTVPRLSSLKV 269
A L GL L L NL L+ + P+L L+V
Sbjct: 440 AGLGGLMH---LKLKGNLALSQAFSKDSFPKLRILEV 473
Score = 56 (24.8 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L++L ++HNQ + +L KL + HN+I + +FS +
Sbjct: 351 LPRLRILELSHNQIEELP--SLHRCQKLEEIGLQHNRIWEIGADTFSQL 397
Score = 51 (23.0 bits), Expect = 4.1e-16, Sum P(2) = 4.1e-16
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL 684
LSSL+ L ++ N ++ A + L L L NQ+ L
Sbjct: 397 LSSLQALDLSWNAIRAIHPEAFSTLRSLVKLDLTDNQLTTL 437
Score = 48 (22.0 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 12/46 (26%), Positives = 23/46 (50%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
L +L+ L + +N+ A+ L +L L H+N I + + +F
Sbjct: 233 LHNLETLDLNYNELQEFPV-AIRTLGRLQELGFHNNNIKAIPEKAF 277
Score = 47 (21.6 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 645 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL 684
+SL++L++ + G L +L L HNQI+ L
Sbjct: 328 TSLEILTLTRAGIRLLPAGMCQQLPRLRILELSHNQIEEL 367
Score = 45 (20.9 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 8/14 (57%), Positives = 11/14 (78%)
Query: 663 GALAGLDKLTSLSC 676
GA+AG + LT +SC
Sbjct: 602 GAIAGANALTGISC 615
Score = 45 (20.9 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 8/14 (57%), Positives = 11/14 (78%)
Query: 283 GALAGLDKLTSLSC 296
GA+AG + LT +SC
Sbjct: 602 GAIAGANALTGISC 615
Score = 44 (20.5 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 10/46 (21%), Positives = 20/46 (43%)
Query: 647 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L+ + + HN+ + + L L +L N I + +FS +
Sbjct: 376 LEEIGLQHNRIWEIGADTFSQLSSLQALDLSWNAIRAIHPEAFSTL 421
>UNIPROTKB|E1BG29 [details] [associations]
symbol:GP5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0010544 "negative regulation of platelet activation"
evidence=IEA] [GO:0007160 "cell-matrix adhesion" evidence=IEA]
[GO:0005518 "collagen binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007160
GO:GO:0010544 GeneTree:ENSGT00700000104286 OMA:AMIKIGQ
EMBL:DAAA02001732 EMBL:DAAA02001733 EMBL:DAAA02001734
EMBL:DAAA02001735 IPI:IPI00711271 Ensembl:ENSBTAT00000017571
NextBio:20873574 Uniprot:E1BG29
Length = 583
Score = 237 (88.5 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 87/256 (33%), Positives = 125/256 (48%)
Query: 97 VSLLDCTLSNVTVLP-GKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGL-PNNL 154
+ LLD + +N+T LP G F V L L++ S L ++ G L + L L L N+L
Sbjct: 172 LKLLDLSGNNLTHLPEGLFGVQVKLQKLLLHSNRLASLESGLLDSLRA-LTELQLHTNHL 230
Query: 155 LSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAP 214
S+VP A L +L L LS N+L L + F +L FL LS N L L +
Sbjct: 231 RSIVP-GAFDRLR-SLSSLTLSENRLEFLPSALFLHSHNLTFLTLSENPLEELPKVLFGE 288
Query: 215 LVTLRVLRLQGNRLTVSVVAA---LQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLS 271
+ LR LRL+ +L AA L GLR V ++ LS L A P L L+VL+
Sbjct: 289 IGGLRELRLKSTQLRTLPAAAFRNLTGLR-VLEVSLSPRLSALP--EDAFRGLGELQVLA 345
Query: 272 IAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGA 331
++ +S+ G L GL +L +S N++ L FR LS+L + L HN++ + G
Sbjct: 346 LSSTGLASLPAGLLRGLCRLRHVSLRSNRLRALPSALFRNLSSLEEVQLDHNQLETLPGD 405
Query: 332 SLAHLSNLTTLDLSHN 347
+ L L + L HN
Sbjct: 406 AFEALPRLAGVLLGHN 421
Score = 210 (79.0 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 79/246 (32%), Positives = 112/246 (45%)
Query: 154 LLSVVPTSALAPLAPN----LDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQ 209
LLS SA+AP N L L LS N++ L + L L L L N+L +L Q
Sbjct: 80 LLSDSHVSAIAPGTFNDPIKLKTLRLSRNKITHLPSALLDNLVLLEQLFLDGNELKSLDQ 139
Query: 210 DCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLS-HNLLAGPLGPSTVPRLSSLK 268
+ LV L+ L L N+L + L ++ LDLS +NL P G V L+
Sbjct: 140 NLFQKLVHLQELFLNQNQLAFLPASLFTHLGNLKLLDLSGNNLTHLPEGLFGVQ--VKLQ 197
Query: 269 VLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAV 328
L + N+ +S+ G L L LT L H N + + +F L +LS L L+ NR+ +
Sbjct: 198 KLLLHSNRLASLESGLLDSLRALTELQLHTNHLRSIVPGAFDRLRSLSSLTLSENRLEFL 257
Query: 329 SGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIY---VGFN 385
A H NLT L LS N L L + L + L+ELRL + P + G
Sbjct: 258 PSALFLHSHNLTFLTLSENPLEELPKVLFGEIGGLRELRLKSTQLRTLPAAAFRNLTGLR 317
Query: 386 TMDLEL 391
+++ L
Sbjct: 318 VLEVSL 323
Score = 208 (78.3 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 85/296 (28%), Positives = 130/296 (43%)
Query: 96 RVSLLDCTLSNVTVLPGKFLEG-VTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNL 154
++ L + + +T LP L+ V L L + ELK++ F L LQ L L N
Sbjct: 99 KLKTLRLSRNKITHLPSALLDNLVLLEQLFLDGNELKSLDQNLFQKLVH-LQELFLNQNQ 157
Query: 155 LSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAP 214
L+ +P S L NL LDLS N L L F L L L N+L +L L
Sbjct: 158 LAFLPASLFTHLG-NLKLLDLSGNNLTHLPEGLFGVQVKLQKLLLHSNRLASLESGLLDS 216
Query: 215 LVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLS-SLKVLSIA 273
L L L+L N L V A LRS++ L LS N L PS + S +L L+++
Sbjct: 217 LRALTELQLHTNHLRSIVPGAFDRLRSLSSLTLSENRLE--FLPSALFLHSHNLTFLTLS 274
Query: 274 HNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN-RIVAVSGAS 332
N + + + L L Q+ L +FR L+ L L+++ + R+ A+ +
Sbjct: 275 ENPLEELPKVLFGEIGGLRELRLKSTQLRTLPAAAFRNLTGLRVLEVSLSPRLSALPEDA 334
Query: 333 LAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMD 388
L L L LS L +L L+ L L+ + L N + P ++ ++++
Sbjct: 335 FRGLGELQVLALSSTGLASLPAGLLRGLCRLRHVSLRSNRLRALPSALFRNLSSLE 390
Score = 185 (70.2 bits), Expect = 6.7e-11, P = 6.7e-11
Identities = 82/307 (26%), Positives = 126/307 (41%)
Query: 114 FLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRL 173
F + V L L ++ +L + F L + L+ L L N L+ +P L + L +L
Sbjct: 142 FQKLVHLQELFLNQNQLAFLPASLFTHLGN-LKLLDLSGNNLTHLP-EGLFGVQVKLQKL 199
Query: 174 DLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVV 233
L N+L LE+ L +L L L N L ++ L +L L L NRL
Sbjct: 200 LLHSNRLASLESGLLDSLRALTELQLHTNHLRSIVPGAFDRLRSLSSLTLSENRLEFLPS 259
Query: 234 AALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTS 293
A ++T L LS N L L + L+ L + Q ++ A L L
Sbjct: 260 ALFLHSHNLTFLTLSENPLE-ELPKVLFGEIGGLRELRLKSTQLRTLPAAAFRNLTGLRV 318
Query: 294 LSCHHN-QIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRAL 352
L + ++ L + +FR L L L L+ + ++ L L L + L N LRAL
Sbjct: 319 LEVSLSPRLSALPEDAFRGLGELQVLALSSTGLASLPAGLLRGLCRLRHVSLRSNRLRAL 378
Query: 353 TQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELIYSGVWRHSTLLIPVMLSLCT 412
L L SL+E++LD N + P + + L+ WR L P + L
Sbjct: 379 PSALFRNLSSLEEVQLDHNQLETLPGDAFEALPRLAGVLLGHNPWRCDCGLGPFLAWLRR 438
Query: 413 RSSVVTR 419
+ +V R
Sbjct: 439 HAGLVGR 445
Score = 159 (61.0 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 61/227 (26%), Positives = 95/227 (41%)
Query: 156 SVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPL 215
+V +AL L NL + L L+N SF ++ L L LS + + ++
Sbjct: 39 TVAGIAALG-LPTNLTHILLFQMGRGTLQNNSFSDMTVLQRLLLSDSHVSAIAPGTFNDP 97
Query: 216 VTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHN 275
+ L+ LRL N++T A L L + L L N L L + +L L+ L + N
Sbjct: 98 IKLKTLRLSRNKITHLPSALLDNLVLLEQLFLDGNELKS-LDQNLFQKLVHLQELFLNQN 156
Query: 276 QFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAH 335
Q + + L L L N + L + F L L L NR+ ++ L
Sbjct: 157 QLAFLPASLFTHLGNLKLLDLSGNNLTHLPEGLFGVQVKLQKLLLHSNRLASLESGLLDS 216
Query: 336 LSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYV 382
L LT L L N LR++ L+SL L L +N + P +++
Sbjct: 217 LRALTELQLHTNHLRSIVPGAFDRLRSLSSLTLSENRLEFLPSALFL 263
Score = 61 (26.5 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L+VL+++ +S+ G L GL +L +S N++ L F N+
Sbjct: 338 LGELQVLALSSTGLASLPAGLLRGLCRLRHVSLRSNRLRALPSALFRNL 386
Score = 54 (24.1 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 679
LSSL+ + + HNQ ++ A L +L + HN
Sbjct: 386 LSSLEEVQLDHNQLETLPGDAFEALPRLAGVLLGHN 421
Score = 50 (22.7 bits), Expect = 4.4e-14, Sum P(2) = 4.4e-14
Identities = 11/46 (23%), Positives = 21/46 (45%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
L L+ +S+ N+ ++ L L + HNQ++ L +F
Sbjct: 362 LCRLRHVSLRSNRLRALPSALFRNLSSLEEVQLDHNQLETLPGDAF 407
Score = 40 (19.1 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 15/66 (22%), Positives = 28/66 (42%)
Query: 630 SDSRYVKLQATTILLS-SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHS 688
S++R L + L S +L L+++ N + + + L L Q+ L +
Sbjct: 250 SENRLEFLPSALFLHSHNLTFLTLSENPLEELPKVLFGEIGGLRELRLKSTQLRTLPAAA 309
Query: 689 FSNVIG 694
F N+ G
Sbjct: 310 FRNLTG 315
>WB|WBGene00022789 [details] [associations]
symbol:lron-2 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 InterPro:IPR003591 SMART:SM00369
GeneTree:ENSGT00700000104056 OMA:AMIKIGQ HSSP:P07359 EMBL:FO081193
PIR:T29972 RefSeq:NP_505402.1 ProteinModelPortal:Q23580 SMR:Q23580
STRING:Q23580 PaxDb:Q23580 EnsemblMetazoa:ZK682.5 GeneID:179309
KEGG:cel:CELE_ZK682.5 UCSC:ZK682.5 CTD:179309 WormBase:ZK682.5
eggNOG:NOG280691 HOGENOM:HOG000021591 InParanoid:Q23580
NextBio:904832 Uniprot:Q23580
Length = 575
Score = 224 (83.9 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 82/304 (26%), Positives = 140/304 (46%)
Query: 93 PDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIG-LSSPLQALGLP 151
P + +++LD + + P + T+ LV++ L+NI D AF G L L L L
Sbjct: 60 PIDSLTILDTAIPTI---PANAFQSFTILRLVLNRNTLQNIDDQAFNGPLLDSLIELDLN 116
Query: 152 NNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFL---DLSYNKLM--T 206
+N L +P + + P NL +L L+ N++ +L +T+F S + L +L+ N+L T
Sbjct: 117 DNNLGQIPQTGI-PRLRNLRKLYLNRNRINQLSSTAFNAFESRDLLLKLELAGNRLTDAT 175
Query: 207 LSQDCL-APLVTLRVLRLQGNRLTVSVVAALQGLRS-VTDLDLSHNLLAG-PLGPSTVPR 263
L + PL L+ L L+ N LT +AL R+ +T+L+L N + P+G P
Sbjct: 176 LGDATVFRPLTLLQELSLETNSLTSIPSSALVNQRNTLTNLNLGLNSINEVPVGALDFPV 235
Query: 264 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 323
LSSL S+ N + + A G+ L L N+ FR ++ L L +
Sbjct: 236 LSSL---SLEFNGITVIPPQAFQGVPNLQFLYMTGNKFPSWAPEMFRYITQLKTLGIGET 292
Query: 324 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVG 383
I + + H+ NL L++S + + + +Q + L+ N +S + G
Sbjct: 293 PISVIPNNAFMHIPNLIRLEMSEAAVDTIERGAFQRTPQIQAIVLNKNRLSQVRADFFEG 352
Query: 384 FNTM 387
N +
Sbjct: 353 LNDL 356
Score = 158 (60.7 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 94/406 (23%), Positives = 162/406 (39%)
Query: 126 SSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLEN 185
++G L+N P+ +L + + + +P +A + RL L+ N L +++
Sbjct: 42 NAGSLQNAIQAIQAARDIPIDSLTILDTAIPTIPANAFQSFT--ILRLVLNRNTLQNIDD 99
Query: 186 TSFKG--LSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRS-- 241
+F G L SL LDL+ N L + Q + L LR L L NR+ A S
Sbjct: 100 QAFNGPLLDSLIELDLNDNNLGQIPQTGIPRLRNLRKLYLNRNRINQLSSTAFNAFESRD 159
Query: 242 -VTDLDLSHNLLA-GPLGPSTVPR-LSSLKVLSIAHNQFSSVRRGALAGL-DKLTSLSCH 297
+ L+L+ N L LG +TV R L+ L+ LS+ N +S+ AL + LT+L+
Sbjct: 160 LLLKLELAGNRLTDATLGDATVFRPLTLLQELSLETNSLTSIPSSALVNQRNTLTNLNLG 219
Query: 298 HNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLI 357
N I+ + + LS L L N I + + + NL L ++ N + ++
Sbjct: 220 LNSINEVPVGALD-FPVLSSLSLEFNGITVIPPQAFQGVPNLQFLYMTGNKFPSWAPEMF 278
Query: 358 TPLKSLQELRLDDNDISMEPECIYVGF-NTMDLELIYSGVWRHSTLLIPVMLSLCTRSSV 416
+ L+ L + + IS+ P ++ N + LE+ + V T+
Sbjct: 279 RYITQLKTLGIGETPISVIPNNAFMHIPNLIRLEMSEAAV---DTI----------ERGA 325
Query: 417 VTRYRYCVVLIEGSNILDQ--SALVLGCSEILALVPTLTSQPLSYVTSLR-ANVTGLGTV 473
R ++ N L Q + G +++ ++ L + V L AN+ + +
Sbjct: 326 FQRTPQIQAIVLNKNRLSQVRADFFEGLNDLYSI--DLQGNRIDNVQPLGFANLPAISHL 383
Query: 474 QVYVQLWTNYDPNCLLTITLYIDGDVIVQKNTNCSRPWVSLKQLPW 519
+ L N L D V C PW +L W
Sbjct: 384 DISYNLLQTMPSNVFQNSFLPQPNDRRVIYA--CGNPWYCNSELEW 427
Score = 149 (57.5 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 43/157 (27%), Positives = 80/157 (50%)
Query: 97 VSLLDCTLSNVTVLPGKFLEGV-TLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLL 155
+S L + +TV+P + +GV L L ++ + + + F ++ L+ LG+ +
Sbjct: 236 LSSLSLEFNGITVIPPQAFQGVPNLQFLYMTGNKFPSWAPEMFRYITQ-LKTLGIGETPI 294
Query: 156 SVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPL 215
SV+P +A + PNL RL++S + +E +F+ + + L+ N+L + D L
Sbjct: 295 SVIPNNAFMHI-PNLIRLEMSEAAVDTIERGAFQRTPQIQAIVLNKNRLSQVRADFFEGL 353
Query: 216 VTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLL 252
L + LQGNR+ L +++ LD+S+NLL
Sbjct: 354 NDLYSIDLQGNRIDNVQPLGFANLPAISHLDISYNLL 390
Score = 59 (25.8 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 13/46 (28%), Positives = 25/46 (54%)
Query: 647 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
++ + + N+ S VR GL+ L S+ N+ID ++ F+N+
Sbjct: 332 IQAIVLNKNRLSQVRADFFEGLNDLYSIDLQGNRIDNVQPLGFANL 377
Score = 43 (20.2 bits), Expect = 6.1e-15, Sum P(2) = 6.1e-15
Identities = 10/48 (20%), Positives = 22/48 (45%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSN 691
L+ L + + N+ +V+ A L ++ L +N + + + F N
Sbjct: 353 LNDLYSIDLQGNRIDNVQPLGFANLPAISHLDISYNLLQTMPSNVFQN 400
>UNIPROTKB|A6QPQ1 [details] [associations]
symbol:NEPN "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030512 "negative regulation of transforming growth
factor beta receptor signaling pathway" evidence=IEA] [GO:0030198
"extracellular matrix organization" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005614 "interstitial
matrix" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005615
GO:GO:0030198 GO:GO:0000122 InterPro:IPR000372 SMART:SM00013
GO:GO:0030512 GO:GO:0005614 GeneTree:ENSGT00700000104286
EMBL:DAAA02025759 EMBL:DAAA02025760 EMBL:DAAA02025761 EMBL:BC149425
IPI:IPI00867027 IPI:IPI01028059 RefSeq:NP_001096797.1
UniGene:Bt.98028 STRING:A6QPQ1 Ensembl:ENSBTAT00000055571
GeneID:100125284 KEGG:bta:100125284 CTD:66650 eggNOG:NOG261221
HOGENOM:HOG000152307 HOVERGEN:HBG075864 InParanoid:A6QPQ1
OMA:RRLYISH OrthoDB:EOG49KFQM NextBio:20788795 Uniprot:A6QPQ1
Length = 512
Score = 236 (88.1 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 91/311 (29%), Positives = 152/311 (48%)
Query: 64 CACDLPHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLP-GKFLEGVTLHG 122
C+CD +++C Y ++E G+ P L + S + L F + + L
Sbjct: 25 CSCDSEQSVQC-------YRLTEVPSGI-PSTTKKLY-ISHSKIQHLQLSNFTQMLALED 75
Query: 123 LVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYK 182
++ + +++ + F LS+ L+ L L N L VP + L +L+ L L+ N +Y
Sbjct: 76 FLLLASGTESVENDTFKTLST-LKTLELWKNKLRRVPRA----LPASLEVLKLNDNSIYV 130
Query: 183 LENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSV 242
L + F+GL L L+L N + ++S L+ LV+L+ L L N + +V L L +
Sbjct: 131 LHGSDFEGLKKLKILELKNNLISSISTSMLSSLVSLQSLMLDANNIE-NVEGPL-ALPHL 188
Query: 243 TDLDLSHNLLAGPLGPSTV-PRLSSLKVLSIAHNQFSSVRRGALAGLDK-LTSLSCHHNQ 300
L + +N L L P++ L SL+ LS + N + + L K L SL N+
Sbjct: 189 KHLSMENNKLH--LIPASFFTSLQSLQFLSFSSNFLTKIP----INLPKSLLSLKMERNR 242
Query: 301 IDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPL 360
+ + + L LSHL L+ N + ++ GA L L+NLTTL++S N L+ L L P
Sbjct: 243 LKAVRFRDMKHLENLSHLYLSENSLSSIEGAQL--LANLTTLEVSQNQLQTLPLRL--PA 298
Query: 361 KSLQELRLDDN 371
+ LQ+L + +N
Sbjct: 299 R-LQKLDISNN 308
Score = 180 (68.4 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 77/253 (30%), Positives = 114/253 (45%)
Query: 120 LHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQ 179
L L + + +L I F L S LQ L +N L+ +P + L +L L + N+
Sbjct: 188 LKHLSMENNKLHLIPASFFTSLQS-LQFLSFSSNFLTKIPIN----LPKSLLSLKMERNR 242
Query: 180 LYKLENTSFKGLSSLNFLDLSYNKLMTLS-QDCLAPLVTLRVLRLQGNRLTVSVVAALQG 238
L + K L +L+ L LS N L ++ LA L TL V + Q L + + A LQ
Sbjct: 243 LKAVRFRDMKHLENLSHLYLSENSLSSIEGAQLLANLTTLEVSQNQLQTLPLRLPARLQ- 301
Query: 239 LRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHH 298
LD+S+NL+ + L LK L + +N S GAL +L++L+
Sbjct: 302 -----KLDISNNLIR-KVTAQDFRDLRDLKHLFLDNNIVSLFEAGALQKCSQLSNLALEQ 355
Query: 299 NQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLIT 358
N +L R TL+ LDL N I ++ + L L L+L +N L AL +
Sbjct: 356 N---LLLSIPLRLPGTLARLDLKGNAIQDIAEREVKDLKQLQVLNLRNNRLSALDLKALE 412
Query: 359 PLKSLQELRLDDN 371
L L+ L LD N
Sbjct: 413 VLPRLRHLYLDGN 425
Score = 168 (64.2 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 79/290 (27%), Positives = 131/290 (45%)
Query: 105 SNVTVLPGKFLEGVT-LHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSAL 163
+++ VL G EG+ L L + + + +IS L S LQ+L L N + V
Sbjct: 126 NSIYVLHGSDFEGLKKLKILELKNNLISSISTSMLSSLVS-LQSLMLDANNIENVE---- 180
Query: 164 APLA-PNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLR 222
PLA P+L L + +N+L+ + + F L SL FL S N L + + L++L++ R
Sbjct: 181 GPLALPHLKHLSMENNKLHLIPASFFTSLQSLQFLSFSSNFLTKIPINLPKSLLSLKMER 240
Query: 223 LQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKV------------- 269
NRL ++ L +++ L LS N L+ G + L++L+V
Sbjct: 241 ---NRLKAVRFRDMKHLENLSHLYLSENSLSSIEGAQLLANLTTLEVSQNQLQTLPLRLP 297
Query: 270 -----LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 324
L I++N V L L L +N + + E + + S LS+L L N
Sbjct: 298 ARLQKLDISNNLIRKVTAQDFRDLRDLKHLFLDNNIVSLFEAGALQKCSQLSNLALEQNL 357
Query: 325 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 374
++++ L L LDL N ++ + + + LK LQ L L +N +S
Sbjct: 358 LLSIP---LRLPGTLARLDLKGNAIQDIAEREVKDLKQLQVLNLRNNRLS 404
Score = 43 (20.2 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 20/64 (31%), Positives = 29/64 (45%)
Query: 616 IPVAQQEDDINRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLS 675
+P Q+ DI+ N R V Q L LK L + +N S GAL +L++L+
Sbjct: 296 LPARLQKLDISNNLI--RKVTAQDFRDL-RDLKHLFLDNNIVSLFEAGALQKCSQLSNLA 352
Query: 676 CHHN 679
N
Sbjct: 353 LEQN 356
>UNIPROTKB|Q9HBX8 [details] [associations]
symbol:LGR6 "Leucine-rich repeat-containing G-protein
coupled receptor 6" species:9606 "Homo sapiens" [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021
GO:GO:0005886 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 SMART:SM00013 GO:GO:0016500 HOVERGEN:HBG031675
EMBL:AF190501 EMBL:AY358119 EMBL:AL356953 EMBL:BC047905
EMBL:AB049405 EMBL:AB083616 EMBL:AK027377 IPI:IPI00151908
IPI:IPI00479360 IPI:IPI00514691 RefSeq:NP_001017403.1
RefSeq:NP_001017404.1 RefSeq:NP_067649.2 UniGene:Hs.497402
ProteinModelPortal:Q9HBX8 SMR:Q9HBX8 STRING:Q9HBX8
PhosphoSite:Q9HBX8 DMDM:158519993 PaxDb:Q9HBX8 PRIDE:Q9HBX8
Ensembl:ENST00000255432 Ensembl:ENST00000367278
Ensembl:ENST00000439764 GeneID:59352 KEGG:hsa:59352 UCSC:uc001gxu.3
UCSC:uc001gxv.3 UCSC:uc001gxw.3 CTD:59352 GeneCards:GC01P202163
HGNC:HGNC:19719 MIM:606653 neXtProt:NX_Q9HBX8 PharmGKB:PA134927114
InParanoid:Q9HBX8 KO:K08399 OrthoDB:EOG4SQWW8 GenomeRNAi:59352
NextBio:65269 ArrayExpress:Q9HBX8 Bgee:Q9HBX8 CleanEx:HS_LGR6
Genevestigator:Q9HBX8 Uniprot:Q9HBX8
Length = 967
Score = 232 (86.7 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 89/283 (31%), Positives = 131/283 (46%)
Query: 64 CACDLPHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVL-PGKFLEGVTLHG 122
C C + +A+ S+L +S L+P + LD +++N+T L PG F L
Sbjct: 39 CHCQ-EDGIMLSADCSEL-GLSAVPGDLDP--LTAYLDLSMNNLTELQPGLFHHLRFLEE 94
Query: 123 LVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYK 182
L +S L +I AF GL S L+ L L NN L +P AL L P+L L L N +
Sbjct: 95 LRLSGNHLSHIPGQAFSGLYS-LKILMLQNNQLGGIPAEALWEL-PSLQSLRLDANLISL 152
Query: 183 LENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSV 242
+ SF+GLSSL L L N L + L L L+ + L NR++ A Q L S+
Sbjct: 153 VPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNRISHIPDYAFQNLTSL 212
Query: 243 TDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID 302
L L HN LG + L +L+ L + +N+ A+ L +L L H+N I
Sbjct: 213 VVLHL-HNNRIQHLGTHSFEGLHNLETLDLNYNKLQEFPV-AIRTLGRLQELGFHNNNIK 270
Query: 303 VLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLS 345
+ + +F L + N I V ++ +L L TL L+
Sbjct: 271 AIPEKAFMGNPLLQTIHFYDNPIQFVGRSAFQYLPKLHTLSLN 313
Score = 227 (85.0 bits), Expect = 5.8e-16, Sum P(2) = 5.8e-16
Identities = 88/250 (35%), Positives = 125/250 (50%)
Query: 135 DGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSL 194
DG I LS+ LGL S VP L PL LD LS N L +L+ F L L
Sbjct: 44 DG--IMLSADCSELGL-----SAVPGD-LDPLTAYLD---LSMNNLTELQPGLFHHLRFL 92
Query: 195 NFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAG 254
L LS N L + + L +L++L LQ N+L AL L S+ L L NL++
Sbjct: 93 EELRLSGNHLSHIPGQAFSGLYSLKILMLQNNQLGGIPAEALWELPSLQSLRLDANLIS- 151
Query: 255 PLGPS-TVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALS 313
L P + LSSL+ L + N + + AL L L +++ N+I + D++F+ L+
Sbjct: 152 -LVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNRISHIPDYAFQNLT 210
Query: 314 TLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 373
+L L L +NRI + S L NL TLDL++N L+ + T L LQEL +N+I
Sbjct: 211 SLVVLHLHNNRIQHLGTHSFEGLHNLETLDLNYNKLQEFPVAIRT-LGRLQELGFHNNNI 269
Query: 374 SMEPECIYVG 383
PE ++G
Sbjct: 270 KAIPEKAFMG 279
Score = 217 (81.4 bits), Expect = 9.9e-14, Sum P(2) = 9.9e-14
Identities = 87/317 (27%), Positives = 140/317 (44%)
Query: 67 DLP--HTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGV-TLHGL 123
+LP +LR AN L S GL + L D L T +P + L + L +
Sbjct: 136 ELPSLQSLRLDANLISLVP-ERSFEGLSSLRHLWLDDNAL---TEIPVRALNNLPALQAM 191
Query: 124 VISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKL 183
++ + +I D AF L+S L L L NN + + T + L NL+ LDL++N+L +
Sbjct: 192 TLALNRISHIPDYAFQNLTS-LVVLHLHNNRIQHLGTHSFEGLH-NLETLDLNYNKLQEF 249
Query: 184 ENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVT 243
+ + L L L N + + + L+ + N + +A Q L +
Sbjct: 250 P-VAIRTLGRLQELGFHNNNIKAIPEKAFMGNPLLQTIHFYDNPIQFVGRSAFQYLPKLH 308
Query: 244 DLDLSHNLLAGPLGPSTVPRL---SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQ 300
L L+ G + P L +SL++L++ + G L +L L HNQ
Sbjct: 309 TLSLN-----GAMDIQEFPDLKGTTSLEILTLTRAGIRLLPSGMCQQLPRLRVLELSHNQ 363
Query: 301 IDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPL 360
I+ L S L + L HNRI + + + LS+L LDLS N +R++ + + L
Sbjct: 364 IEELP--SLHRCQKLEEIGLQHNRIWEIGADTFSQLSSLQALDLSWNAIRSIHPEAFSTL 421
Query: 361 KSLQELRLDDNDISMEP 377
SL +L L DN ++ P
Sbjct: 422 HSLVKLDLTDNQLTTLP 438
Score = 156 (60.0 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 79/300 (26%), Positives = 124/300 (41%)
Query: 85 SESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSP 144
+ S GL + LD + + P L L + +K I + AF+G +P
Sbjct: 227 THSFEGLH---NLETLDLNYNKLQEFPVAIRTLGRLQELGFHNNNIKAIPEKAFMG--NP 281
Query: 145 L-QALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNK 203
L Q + +N + V SA L P L L L+ + E KG +SL L L+
Sbjct: 282 LLQTIHFYDNPIQFVGRSAFQYL-PKLHTLSLN-GAMDIQEFPDLKGTTSLEILTLTRAG 339
Query: 204 LMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPR 263
+ L L LRVL L N+ + + +L + + ++ L HN + +G T +
Sbjct: 340 IRLLPSGMCQQLPRLRVLELSHNQ--IEELPSLHRCQKLEEIGLQHNRI-WEIGADTFSQ 396
Query: 264 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 323
LSSL+ L ++ N S+ A + L L L NQ+ L L L HL L N
Sbjct: 397 LSSLQALDLSWNAIRSIHPEAFSTLHSLVKLDLTDNQLTTLP---LAGLGGLMHLKLKGN 453
Query: 324 RIVAVSGA-SLAHLSNLTTLDLSHNFLRALTQDLITPLKS-----LQELRLDDNDISMEP 377
+A+S A S L L++ + + + K+ ++L LDD + S P
Sbjct: 454 --LALSQAFSKDSFPKLRILEVPYAYQCCPYGMCASFFKASGQWEAEDLHLDDEESSKRP 511
Score = 143 (55.4 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 56/184 (30%), Positives = 83/184 (45%)
Query: 212 LAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLS 271
L PL L L N LT LR + +L LS N L+ G + L SLK+L
Sbjct: 64 LDPLTAY--LDLSMNNLTELQPGLFHHLRFLEELRLSGNHLSHIPGQA-FSGLYSLKILM 120
Query: 272 IAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGA 331
+ +NQ + AL L L SL N I ++ + SF LS+L HL L N + +
Sbjct: 121 LQNNQLGGIPAEALWELPSLQSLRLDANLISLVPERSFEGLSSLRHLWLDDNALTEIPVR 180
Query: 332 SLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMD-LE 390
+L +L L + L+ N + + L SL L L +N I + G + ++ L+
Sbjct: 181 ALNNLPALQAMTLALNRISHIPDYAFQNLTSLVVLHLHNNRIQHLGTHSFEGLHNLETLD 240
Query: 391 LIYS 394
L Y+
Sbjct: 241 LNYN 244
Score = 57 (25.1 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L+VL ++HNQ + +L KL + HN+I + +FS +
Sbjct: 351 LPRLRVLELSHNQIEELP--SLHRCQKLEEIGLQHNRIWEIGADTFSQL 397
Score = 55 (24.4 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL 684
LSSL+ L ++ N S+ A + L L L NQ+ L
Sbjct: 397 LSSLQALDLSWNAIRSIHPEAFSTLHSLVKLDLTDNQLTTL 437
Score = 47 (21.6 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 645 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL 684
+SL++L++ + G L +L L HNQI+ L
Sbjct: 328 TSLEILTLTRAGIRLLPSGMCQQLPRLRVLELSHNQIEEL 367
Score = 47 (21.6 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 12/46 (26%), Positives = 23/46 (50%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
L +L+ L + +N+ A+ L +L L H+N I + + +F
Sbjct: 233 LHNLETLDLNYNKLQEFPV-AIRTLGRLQELGFHNNNIKAIPEKAF 277
Score = 46 (21.3 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 663 GALAGLDKLTSLSCHH-NQIDVLEDHSFS 690
GA+AG + LT +SC +D L FS
Sbjct: 602 GAIAGANTLTGISCGLLASVDALTFGQFS 630
Score = 42 (19.8 bits), Expect = 5.9e-15, Sum P(2) = 5.9e-15
Identities = 10/46 (21%), Positives = 20/46 (43%)
Query: 647 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L+ + + HN+ + + L L +L N I + +FS +
Sbjct: 376 LEEIGLQHNRIWEIGADTFSQLSSLQALDLSWNAIRSIHPEAFSTL 421
>WB|WBGene00006366 [details] [associations]
symbol:sym-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0005615 "extracellular space" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0009792 GO:GO:0005615
InterPro:IPR003591 SMART:SM00369 GeneTree:ENSGT00690000101816
EMBL:Z79598 EMBL:AJ242473 PIR:T19939 RefSeq:NP_510426.1
UniGene:Cel.8136 ProteinModelPortal:G5EFP4 SMR:G5EFP4
EnsemblMetazoa:C44H4.3 GeneID:181555 KEGG:cel:CELE_C44H4.3
CTD:181555 WormBase:C44H4.3 OMA:NMERFWR NextBio:914424
Uniprot:G5EFP4
Length = 680
Score = 237 (88.5 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 77/302 (25%), Positives = 142/302 (47%)
Query: 64 CACDLPHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLP-G-KFLEGVTLH 121
C+CD T+ K + + L + + + L N ++ G K + + +
Sbjct: 29 CSCD--STVEGPVIKCSGHDGLRMVEKLSTTTTMEVRELALENADIIEVGPKAFKTLRIK 86
Query: 122 GLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLY 181
L++S+ ++ I D AF GL + +Q L L N L VPTSALA L L+ L L N++
Sbjct: 87 KLILSNNRIEKIHDHAFTGLENVMQELSLSENNLKEVPTSALAGLRV-LNILSLKCNKIE 145
Query: 182 KLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPL-VTLRVLRLQGNRLTVSVVAALQGLR 240
+ +F ++SL ++L N++ +++ D A + ++L+ L L N +T A++ +
Sbjct: 146 NITTKAFVNMTSLIDVNLGCNQICSMAADTFANVKMSLQNLILDNNCMTEFPSKAVRNMN 205
Query: 241 SVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQ 300
++ L + +N + + + L+SL +LS+ N S ++ GAL L L + N
Sbjct: 206 NLIALHIKYNKI-NAIRQNDFVNLTSLSMLSLNGNNISEIKGGALQNTPNLHYLYLNENN 264
Query: 301 IDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLI--T 358
+ L++ L LDL+ N ++ L ++ L+L N + A+ T
Sbjct: 265 LQTLDNGVLEQFKQLQVLDLSFNNFTDITKEMFEGLESIQHLNLDSNRISAVAPGAFAGT 324
Query: 359 PL 360
PL
Sbjct: 325 PL 326
Score = 219 (82.2 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 77/304 (25%), Positives = 140/304 (46%)
Query: 85 SESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSP 144
+ +L GL +SL + N+T F+ +L + + ++ +++ F +
Sbjct: 125 TSALAGLRVLNILSLKCNKIENITTKA--FVNMTSLIDVNLGCNQICSMAADTFANVKMS 182
Query: 145 LQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKL 204
LQ L L NN ++ P+ A+ + NL L + +N++ + F L+SL+ L L+ N +
Sbjct: 183 LQNLILDNNCMTEFPSKAVRNMN-NLIALHIKYNKINAIRQNDFVNLTSLSMLSLNGNNI 241
Query: 205 MTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRL 264
+ L L L L N L L+ + + LDLS N + L
Sbjct: 242 SEIKGGALQNTPNLHYLYLNENNLQTLDNGVLEQFKQLQVLDLSFNNFTD-ITKEMFEGL 300
Query: 265 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 324
S++ L++ N+ S+V GA AG L L +N + + + + L + L++N
Sbjct: 301 ESIQHLNLDSNRISAVAPGAFAGTPLLL-LWLPNNCLTEVSQQTLKGAPFLRMVSLSNNN 359
Query: 325 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGF 384
I V S HL NL TLDL++N + +L ++ ++L +RL +N + C+ GF
Sbjct: 360 IREVHELSFDHLPNLHTLDLANNKIMSLQNKSLSGPENLA-VRLQENPVV----CVKNGF 414
Query: 385 NTMD 388
+ ++
Sbjct: 415 HVLN 418
Score = 215 (80.7 bits), Expect = 5.5e-14, Sum P(2) = 5.5e-14
Identities = 63/253 (24%), Positives = 115/253 (45%)
Query: 123 LVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYK 182
L + + ++ + AF L ++ L L NN + + A L + L LS N L +
Sbjct: 65 LALENADIIEVGPKAFKTLR--IKKLILSNNRIEKIHDHAFTGLENVMQELSLSENNLKE 122
Query: 183 LENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLR-S 241
+ ++ GL LN L L NK+ ++ + +L + L N++ ++ S
Sbjct: 123 VPTSALAGLRVLNILSLKCNKIENITTKAFVNMTSLIDVNLGCNQICSMAADTFANVKMS 182
Query: 242 VTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 301
+ +L L +N + V +++L L I +N+ +++R+ L L+ LS + N I
Sbjct: 183 LQNLILDNNCMT-EFPSKAVRNMNNLIALHIKYNKINAIRQNDFVNLTSLSMLSLNGNNI 241
Query: 302 DVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLK 361
++ + + L +L L N + + L L LDLS N +T+++ L+
Sbjct: 242 SEIKGGALQNTPNLHYLYLNENNLQTLDNGVLEQFKQLQVLDLSFNNFTDITKEMFEGLE 301
Query: 362 SLQELRLDDNDIS 374
S+Q L LD N IS
Sbjct: 302 SIQHLNLDSNRIS 314
Score = 46 (21.3 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 12/44 (27%), Positives = 24/44 (54%)
Query: 647 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFS 690
L+++S+++N V + L L +L +N+I L++ S S
Sbjct: 350 LRMVSLSNNNIREVHELSFDHLPNLHTLDLANNKIMSLQNKSLS 393
Score = 43 (20.2 bits), Expect = 4.1e-16, Sum P(2) = 4.1e-16
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKL 671
L +L L +A+N+ S++ +L+G + L
Sbjct: 371 LPNLHTLDLANNKIMSLQNKSLSGPENL 398
>UNIPROTKB|E2QW21 [details] [associations]
symbol:LRRTM1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050808 "synapse organization" evidence=IEA]
[GO:0035418 "protein localization to synapse" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0007610 "behavior" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005783 GO:GO:0007610 GO:GO:0030424
InterPro:IPR003591 SMART:SM00369 GO:GO:0050808 GO:GO:0030426
InterPro:IPR000372 SMART:SM00013 GO:GO:0035418
GeneTree:ENSGT00700000104056 CTD:347730 KO:K16665 OMA:EPDLFHG
EMBL:AAEX03010953 RefSeq:XP_540204.1 ProteinModelPortal:E2QW21
Ensembl:ENSCAFT00000012896 GeneID:483089 KEGG:cfa:483089
NextBio:20857544 Uniprot:E2QW21
Length = 522
Score = 233 (87.1 bits), Expect = 2.8e-16, P = 2.8e-16
Identities = 75/240 (31%), Positives = 113/240 (47%)
Query: 143 SPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYN 202
S L L L N LS + L L L L HN + ++ +F+ L + L LS N
Sbjct: 65 SGLLGLSLRYNSLSELRAGQFTGLM-QLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSN 123
Query: 203 KLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVP 262
++ L+ P+ LR + L N+L GLR +T L + N + P +
Sbjct: 124 QITQLANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRSNAIQ--FVPVRIF 181
Query: 263 R-LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 321
+ SLK L I +NQ S+ R + AGL KLT L HN + + F L +L L L
Sbjct: 182 QDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLK 241
Query: 322 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS-MEPECI 380
N+ VA+ +SL + NL +DLS N + + + + LQ L+LD N ++ +EP +
Sbjct: 242 RNK-VAIVVSSLDWVWNLEKMDLSGNEIEYMEPHVFETVPHLQSLQLDSNRLTYIEPRIL 300
Score = 230 (86.0 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 82/273 (30%), Positives = 120/273 (43%)
Query: 99 LLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVV 158
LL C N+T P L G L GL + L + G F GL L L L +N + V
Sbjct: 49 LLYCEALNLTEAPHN-LSG--LLGLSLRYNSLSELRAGQFTGLMQ-LTWLYLDHNHICSV 104
Query: 159 PTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTL 218
A L + L LS NQ+ +L NT+F+ + +L +DLSYNKL L+ D L L
Sbjct: 105 QGDAFQKLR-RVKELTLSSNQITQLANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKL 163
Query: 219 RVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFS 278
L ++ N + V Q RS+ LD+ +N L L ++ L L L + HN
Sbjct: 164 TTLHMRSNAIQFVPVRIFQDCRSLKFLDIGYNQLKS-LARNSFAGLFKLTELHLEHNDLV 222
Query: 279 SVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSN 338
V L L SL N++ ++ S + L +DL+ N I + + +
Sbjct: 223 KVNFAHFPRLISLHSLCLKRNKVAIVVS-SLDWVWNLEKMDLSGNEIEYMEPHVFETVPH 281
Query: 339 LTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
L +L L N L + ++ KSL + L N
Sbjct: 282 LQSLQLDSNRLTYIEPRILNSWKSLTSITLAGN 314
Score = 170 (64.9 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 56/185 (30%), Positives = 86/185 (46%)
Query: 191 LSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHN 250
LS L L L YN L L L+ L L L N + A Q LR V +L LS N
Sbjct: 64 LSGLLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSN 123
Query: 251 LLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFR 310
+ L +T + +L+ + +++N+ ++ GL KLT+L N I + F+
Sbjct: 124 QIT-QLANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRSNAIQFVPVRIFQ 182
Query: 311 ALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDD 370
+L LD+ +N++ +++ S A L LT L L HN L + L SL L L
Sbjct: 183 DCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLKR 242
Query: 371 NDISM 375
N +++
Sbjct: 243 NKVAI 247
Score = 169 (64.5 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 41/118 (34%), Positives = 63/118 (53%)
Query: 264 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 323
LS L LS+ +N S +R G GL +LT L HN I ++ +F+ L + L L+ N
Sbjct: 64 LSGLLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSN 123
Query: 324 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIY 381
+I ++ + + NL ++DLS+N L+AL DL L+ L L + N I P I+
Sbjct: 124 QITQLANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRSNAIQFVPVRIF 181
Score = 86 (35.3 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 646 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
SLK L I +NQ S+ R + AGL KLT L HN +
Sbjct: 186 SLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDL 221
Score = 42 (19.8 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L SL L + N+ + V +L + L + N+I+ +E H F V
Sbjct: 232 LISLHSLCLKRNKVAIVV-SSLDWVWNLEKMDLSGNEIEYMEPHVFETV 279
>MGI|MGI:1194924 [details] [associations]
symbol:Cd180 "CD180 antigen" species:10090 "Mus musculus"
[GO:0002322 "B cell proliferation involved in immune response"
evidence=IMP] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006954 "inflammatory response" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0031666 "positive regulation of
lipopolysaccharide-mediated signaling pathway" evidence=ISO;IGI]
[GO:0045087 "innate immune response" evidence=IEA] [GO:0071222
"cellular response to lipopolysaccharide" evidence=IMP]
PROSITE:PS51450 MGI:MGI:1194924 GO:GO:0016021 GO:GO:0005886
GO:GO:0006954 InterPro:IPR000483 SMART:SM00082 GO:GO:0045087
CTD:4064 eggNOG:NOG319009 HOGENOM:HOG000146395 HOVERGEN:HBG050848
KO:K06555 OrthoDB:EOG4W3SMG EMBL:D37797 EMBL:AK089255
IPI:IPI00343568 PIR:I56258 RefSeq:NP_032559.2 UniGene:Mm.373974
PDB:3T6Q PDBsum:3T6Q ProteinModelPortal:Q62192 SMR:Q62192
DIP:DIP-30961N IntAct:Q62192 STRING:Q62192 PhosphoSite:Q62192
PaxDb:Q62192 PRIDE:Q62192 DNASU:17079 Ensembl:ENSMUST00000022124
GeneID:17079 KEGG:mmu:17079 GeneTree:ENSGT00700000104185
InParanoid:Q8C251 OMA:TEAFKEC NextBio:291202 Bgee:Q62192
CleanEx:MM_CD180 Genevestigator:Q62192
GermOnline:ENSMUSG00000021624 Uniprot:Q62192
Length = 661
Score = 235 (87.8 bits), Expect = 2.8e-16, P = 2.8e-16
Identities = 80/289 (27%), Positives = 140/289 (48%)
Query: 100 LDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSV-V 158
LD T ++++ LP + TL LV+S+ + +N+ + S L L + N + +
Sbjct: 303 LDLTATHLSELPSGLVGLSTLKKLVLSANKFENLCQISASNFPS-LTHLSIKGNTKRLEL 361
Query: 159 PTSALAPLAPNLDRLDLSHNQLYKLE--NTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLV 216
T L L NL LDLSH+ + + N + LS L L+LSYN+ ++L +
Sbjct: 362 GTGCLENLE-NLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECP 420
Query: 217 TLRVLRLQGNRLTVS-VVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHN 275
L +L L RL V + Q L + L+LSH+LL L +L+ L++ N
Sbjct: 421 QLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLL-DISSEQLFDGLPALQHLNLQGN 479
Query: 276 QF--SSVRR-GALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGAS 332
F ++++ +L L +L L + ++ H+F +L ++H+DL+HNR+ + S +
Sbjct: 480 HFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEA 539
Query: 333 LAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIY 381
L+HL + L+L+ N + + L+ L + + L N + IY
Sbjct: 540 LSHLKGIY-LNLASNRISIILPSLLPILSQQRTINLRQNPLDCTCSNIY 587
Score = 166 (63.5 bits), Expect = 9.1e-09, Sum P(2) = 9.1e-09
Identities = 56/206 (27%), Positives = 91/206 (44%)
Query: 169 NLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRL 228
+++ ++L + + + + +F S L LDL+ L L L L TL+ L L N+
Sbjct: 275 SVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLSELPSG-LVGLSTLKKLVLSANKF 333
Query: 229 TVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQF--SSVRRGALA 286
+ S+T L + N LG + L +L+ L ++H+ S L
Sbjct: 334 ENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLR 393
Query: 287 GLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGAS-LAHLSNLTTLDLS 345
L L SL+ +N+ L+ +F+ L LDLA R+ S +L L L+LS
Sbjct: 394 NLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLS 453
Query: 346 HNFLRALTQDLITPLKSLQELRLDDN 371
H+ L ++ L L +LQ L L N
Sbjct: 454 HSLLDISSEQLFDGLPALQHLNLQGN 479
Score = 47 (21.6 bits), Expect = 9.1e-09, Sum P(2) = 9.1e-09
Identities = 14/60 (23%), Positives = 28/60 (46%)
Query: 637 LQATTIL--LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNVIG 694
+Q T L L L++L ++ SS+ + A L + + HN++ + S++ G
Sbjct: 486 IQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKG 545
>UNIPROTKB|Q86VH4 [details] [associations]
symbol:LRRTM4 "Leucine-rich repeat transmembrane neuronal
protein 4" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290681
HOVERGEN:HBG052362 EMBL:AY182030 EMBL:AY358324 EMBL:BC099738
EMBL:BC110058 IPI:IPI00465323 IPI:IPI00884323 RefSeq:NP_001128217.1
RefSeq:NP_079269.4 UniGene:Hs.285782 ProteinModelPortal:Q86VH4
SMR:Q86VH4 STRING:Q86VH4 PhosphoSite:Q86VH4 DMDM:166897996
PaxDb:Q86VH4 PRIDE:Q86VH4 Ensembl:ENST00000409088
Ensembl:ENST00000409093 Ensembl:ENST00000409884 GeneID:80059
KEGG:hsa:80059 UCSC:uc002snq.3 UCSC:uc002sns.2 CTD:80059
GeneCards:GC02M076974 HGNC:HGNC:19411 MIM:610870 neXtProt:NX_Q86VH4
PharmGKB:PA134972631 ChiTaRS:LRRTM4 GenomeRNAi:80059 NextBio:70258
ArrayExpress:Q86VH4 Bgee:Q86VH4 CleanEx:HS_LRRTM4
Genevestigator:Q86VH4 Uniprot:Q86VH4
Length = 590
Score = 234 (87.4 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 93/329 (28%), Positives = 141/329 (42%)
Query: 141 LSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLS 200
+S Q L L N + + ++ A L L L L HN + ++ +F+G+ L L LS
Sbjct: 59 ISGGSQGLSLRFNSIQKLKSNQFAGLN-QLIWLYLDHNYISSVDEDAFQGIRRLKELILS 117
Query: 201 YNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDL-SHNLLAGPLGPS 259
NK+ L P+ LR L L N+L +GLR + L L S++L P+
Sbjct: 118 SNKITYLHNKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPI--R 175
Query: 260 TVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 319
+L L + +N+ S+ R A AGL KL L HNQ + F L L +
Sbjct: 176 VFQDCRNLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIY 235
Query: 320 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS-MEPE 378
L NRI ++S S+L LDLS N ++ + L +LQ+L LD N ++ + E
Sbjct: 236 LQWNRIRSISQGLTWTWSSLHNLDLSGNDIQGIEPGTFKCLPNLQKLNLDSNKLTNISQE 295
Query: 379 CIYVGFNTMDLELIYSG-VWRHSTLLIPVMLSLCTRSSVVTRYRYCV--VLIEGSNILDQ 435
+ + + + L SG +W S + P+ L C I+G + D
Sbjct: 296 TVNAWISLISITL--SGNMWECSRSICPLFYWLKNFKGNKESTMICAGPKHIQGEKVSDA 353
Query: 436 SALVLGCSEILA-------LVPTLTSQPL 457
CSE+ LVP +PL
Sbjct: 354 VETYNICSEVQVVNTERSHLVPQTPQKPL 382
>TAIR|locus:2047530 [details] [associations]
symbol:AT2G24230 species:3702 "Arabidopsis thaliana"
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0006468 "protein phosphorylation"
evidence=IEA;ISS] [GO:0007169 "transmembrane receptor protein
tyrosine kinase signaling pathway" evidence=ISS] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR011009 Pfam:PF07714 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 PROSITE:PS51450 GO:GO:0016021
GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
SUPFAM:SSF56112 GO:GO:0004674 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 Gene3D:2.60.120.200 InterPro:IPR013320 EMBL:AC005967
InterPro:IPR025875 Pfam:PF12799 HOGENOM:HOG000116551 EMBL:AY093187
EMBL:FJ708699 IPI:IPI00538206 PIR:B84634 RefSeq:NP_850049.1
UniGene:At.44784 ProteinModelPortal:C0LGK9 SMR:C0LGK9 PaxDb:C0LGK9
PRIDE:C0LGK9 EnsemblPlants:AT2G24230.1 GeneID:816957
KEGG:ath:AT2G24230 GeneFarm:619 TAIR:At2g24230 InParanoid:Q8RWC6
OMA:IAIYEYM PhylomeDB:C0LGK9 ProtClustDB:CLSN2687596 Uniprot:C0LGK9
Length = 853
Score = 233 (87.1 bits), Expect = 2.9e-16, Sum P(2) = 2.9e-16
Identities = 83/261 (31%), Positives = 125/261 (47%)
Query: 112 GKFLEGVTLHGLV-ISSG-ELKN-ISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAP 168
G F + H ++ I+SG L I D IG S LQ+L L NN +S +P+ +
Sbjct: 59 GLFCDSKNEHVIMLIASGMSLSGQIPDNT-IGKLSKLQSLDLSNNKISALPSDFWS--LN 115
Query: 169 NLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRL 228
L L+LS N++ +++ L LD+SYN + + LV+LRVL+L N
Sbjct: 116 TLKNLNLSFNKISGSFSSNVGNFGQLELLDISYNNFSGAIPEAVDSLVSLRVLKLDHNGF 175
Query: 229 TVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGL 288
+S+ L G +S+ +DLS N L G L L+ LS+A N+ R A +
Sbjct: 176 QMSIPRGLLGCQSLVSIDLSSNQLEGSLPDGFGSAFPKLETLSLAGNKIHG-RDTDFADM 234
Query: 289 DKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVA-VSGASLAHLSNLTTLDLSHN 347
++ L+ NQ D F+ TL DL+ NR +S ++ +L LDLS N
Sbjct: 235 KSISFLNISGNQFDGSVTGVFK--ETLEVADLSKNRFQGHISSQVDSNWFSLVYLDLSEN 292
Query: 348 FLRALTQDLITPLKSLQELRL 368
L + ++L T LK L+ L L
Sbjct: 293 ELSGVIKNL-TLLKKLKHLNL 312
Score = 145 (56.1 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 79/322 (24%), Positives = 145/322 (45%)
Query: 153 NLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCL 212
+L +P + + L+ L LDLS+N++ L + F L++L L+LS+NK+ +
Sbjct: 78 SLSGQIPDNTIGKLS-KLQSLDLSNNKISALPS-DFWSLNTLKNLNLSFNKISGSFSSNV 135
Query: 213 APLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSI 272
L +L + N + ++ A+ L S+ L L HN + P + SL + +
Sbjct: 136 GNFGQLELLDISYNNFSGAIPEAVDSLVSLRVLKLDHNGFQMSI-PRGLLGCQSLVSIDL 194
Query: 273 AHNQFS-SVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV-AVSG 330
+ NQ S+ G + KL +LS N+I D F + ++S L+++ N+ +V+G
Sbjct: 195 SSNQLEGSLPDGFGSAFPKLETLSLAGNKIHG-RDTDFADMKSISFLNISGNQFDGSVTG 253
Query: 331 ASLAHLSNLTTLDLSHN-FLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDL 389
L DLS N F ++ + + SL L L +N++S + + + L
Sbjct: 254 V---FKETLEVADLSKNRFQGHISSQVDSNWFSLVYLDLSENELSGVIKNLTLLKKLKHL 310
Query: 390 ELIYSGVWRHSTLLIP--VMLSLCTRSSVVTRYRYCVVLIEGSNILDQSALVLGCSEILA 447
L ++ R + + P MLS ++ + E S + D S L + + +
Sbjct: 311 NLAWN---RFNRGMFPRIEMLSGLEYLNLSNTNLSGHIPREISKLSDLSTLDVSGNHLAG 367
Query: 448 LVPTLTSQPLSYVTSLRANVTG 469
+P L+ + L + R N+TG
Sbjct: 368 HIPILSIKNLVAIDVSRNNLTG 389
Score = 144 (55.7 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 63/234 (26%), Positives = 103/234 (44%)
Query: 145 LQALGLPNNLLSV-VPTSALAPLAPNLDRLDLSHNQLY-KLENTSFKGLSSLNFLDLSYN 202
L+ L L +N + +P L +L +DLS NQL L + L L L+ N
Sbjct: 165 LRVLKLDHNGFQMSIPRGLLG--CQSLVSIDLSSNQLEGSLPDGFGSAFPKLETLSLAGN 222
Query: 203 KLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVP 262
K+ D A + ++ L + GN+ SV + V DL S N G +
Sbjct: 223 KIHGRDTD-FADMKSISFLNISGNQFDGSVTGVFKETLEVADL--SKNRFQGHISSQVDS 279
Query: 263 RLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 322
SL L ++ N+ S V + L L KL L+ N+ + LS L +L+L++
Sbjct: 280 NWFSLVYLDLSENELSGVIKN-LTLLKKLKHLNLAWNRFNRGMFPRIEMLSGLEYLNLSN 338
Query: 323 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISME 376
+ ++ LS+L+TLD+S N L I +K+L + + N+++ E
Sbjct: 339 TNLSGHIPREISKLSDLSTLDVSGNHLAGHIP--ILSIKNLVAIDVSRNNLTGE 390
Score = 141 (54.7 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 80/304 (26%), Positives = 127/304 (41%)
Query: 81 LYAISESLRGLEPDERVSLLD----CTLSN--VTVLPGKFLEGVTLHGLVISSGELKNIS 134
L A SL G PD + L LSN ++ LP F TL L +S ++ S
Sbjct: 72 LIASGMSLSGQIPDNTIGKLSKLQSLDLSNNKISALPSDFWSLNTLKNLNLSFNKISG-S 130
Query: 135 DGAFIGLSSPLQALGLP-NNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSS 193
+ +G L+ L + NN +P A+ L +L L L HN G S
Sbjct: 131 FSSNVGNFGQLELLDISYNNFSGAIP-EAVDSLV-SLRVLKLDHNGFQMSIPRGLLGCQS 188
Query: 194 LNFLDLSYNKLM-TLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLL 252
L +DLS N+L +L + L L L GN++ ++S++ L++S N
Sbjct: 189 LVSIDLSSNQLEGSLPDGFGSAFPKLETLSLAGNKIH-GRDTDFADMKSISFLNISGNQF 247
Query: 253 AGPLGPSTVPRLSSLKVLSIAHNQFSS-VRRGALAGLDKLTSLSCHHNQID-VLEDHSFR 310
G + T +L+V ++ N+F + + L L N++ V+++ +
Sbjct: 248 DGSV---TGVFKETLEVADLSKNRFQGHISSQVDSNWFSLVYLDLSENELSGVIKNLTL- 303
Query: 311 ALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDD 370
L L HL+LA NR + LS L L+LS+ L I+ L L L +
Sbjct: 304 -LKKLKHLNLAWNRFNRGMFPRIEMLSGLEYLNLSNTNLSGHIPREISKLSDLSTLDVSG 362
Query: 371 NDIS 374
N ++
Sbjct: 363 NHLA 366
Score = 52 (23.4 bits), Expect = 2.9e-16, Sum P(2) = 2.9e-16
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 643 LLSSLKVLSIAHNQFSS---VRRGALAGLDKL----TSLSCH-HNQIDVLEDHSFSNVIG 694
LL LK L++A N+F+ R L+GL+ L T+LS H +I L D S +V G
Sbjct: 303 LLKKLKHLNLAWNRFNRGMFPRIEMLSGLEYLNLSNTNLSGHIPREISKLSDLSTLDVSG 362
>FB|FBgn0260793 [details] [associations]
symbol:2mit species:7227 "Drosophila melanogaster"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
EMBL:AE014297 InterPro:IPR003591 SMART:SM00369
GeneTree:ENSGT00690000101816 RefSeq:NP_650258.2 UniGene:Dm.29781
ProteinModelPortal:Q9VFY9 SMR:Q9VFY9 IntAct:Q9VFY9 MINT:MINT-879044
EnsemblMetazoa:FBtr0301436 GeneID:41616 KEGG:dme:Dmel_CG42573
UCSC:CG17319-RA CTD:41616 FlyBase:FBgn0260793 eggNOG:NOG150682
InParanoid:Q9VFY9 OMA:TRREAPY GenomeRNAi:41616 NextBio:824659
Bgee:Q9VFY9 Uniprot:Q9VFY9
Length = 1141
Score = 249 (92.7 bits), Expect = 3.4e-16, Sum P(2) = 3.4e-16
Identities = 101/346 (29%), Positives = 153/346 (44%)
Query: 141 LSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLS 200
+S P L L N S + TS A P L L+L+HN+L + SF L L L LS
Sbjct: 166 MSLPFVTLDLSCNKFSQISTSFFAQRLPQLKNLNLAHNELLNISRESFYNLLELQTLVLS 225
Query: 201 YNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPST 260
+N + + + L L+ L L NRL+ S + ALQG+ + L +++N G
Sbjct: 226 HNNISDIDYETFLALPNLQYLDLSHNRLSGSAIRALQGIPDLVSLSIAYNPDVGVAMQEF 285
Query: 261 VPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 320
V S LK L + V ALA + +L N + + + L +LDL
Sbjct: 286 VASWS-LKELDASGTGLCQVP-AALA--QSVRTLKLSDNWLKAINCGDMDSYPLLQYLDL 341
Query: 321 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECI 380
+H+RI V +L L L +L L N L + L P SL+ L L N I P
Sbjct: 342 SHSRIAQVEDDALGRLELLESLFLDRNLLMRVPSSL--P-PSLEHLFLQHNQIMELPPQA 398
Query: 381 YVGF-NTMDLELIYSGVWRHSTLLIPVMLSLCTRSSVVTRYRYCVV--LIEGSNILDQSA 437
+VG N L+L + + L +P +L+L SS V +V L + ++L +
Sbjct: 399 FVGLVNLQTLDLSNNRLIFLPPLSLPKLLTLNLESSGVESVSQSIVHTLPQLRDLLLEDN 458
Query: 438 LVLGCSEILALVPTLTSQPLSYVTSLRANVTGLGTVQVYVQLWTNY 483
+ CS++L + + P V + ++N G +V V L T Y
Sbjct: 459 PIK-CSDLLGIAEW--ASPCRSVDAGQSN--G-ASVSGRVDLKTEY 498
Score = 179 (68.1 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 72/259 (27%), Positives = 122/259 (47%)
Query: 125 ISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLD--RLDLSHNQLYK 182
+SS +L+++S F + L+ L L NN L V+P S LA +L LDLS N+ +
Sbjct: 128 LSSNQLESLSLDNF----NQLRQLDLGNNSLEVIPLS-LADTNMSLPFVTLDLSCNKFSQ 182
Query: 183 LENTSF-KGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRS 241
+ + F + L L L+L++N+L+ +S++ L+ L+ L L N ++ L +
Sbjct: 183 ISTSFFAQRLPQLKNLNLAHNELLNISRESFYNLLELQTLVLSHNNISDIDYETFLALPN 242
Query: 242 VTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 301
+ LDLSHN L+G + + L LSIA+N V L L +
Sbjct: 243 LQYLDLSHNRLSGS-AIRALQGIPDLVSLSIAYNPDVGVAMQEFVASWSLKELDASGTGL 301
Query: 302 DVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLK 361
+ +++ TL L+ N + A++ + L LDLSH+ + + D + L+
Sbjct: 302 CQVPAALAQSVRTLK---LSDNWLKAINCGDMDSYPLLQYLDLSHSRIAQVEDDALGRLE 358
Query: 362 SLQELRLDDNDISMEPECI 380
L+ L LD N + P +
Sbjct: 359 LLESLFLDRNLLMRVPSSL 377
Score = 139 (54.0 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 56/204 (27%), Positives = 94/204 (46%)
Query: 173 LDLSHNQLYKLENTSFKGLSSLNFLDLSYNKL----MTLSQDCLA-PLVTLRVLRLQGNR 227
+DLS NQL E+ S + L LDL N L ++L+ ++ P VTL + + ++
Sbjct: 126 MDLSSNQL---ESLSLDNFNQLRQLDLGNNSLEVIPLSLADTNMSLPFVTLDLSCNKFSQ 182
Query: 228 LTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAG 287
++ S A Q L + +L+L+HN L + + L L+ L ++HN S +
Sbjct: 183 ISTSFFA--QRLPQLKNLNLAHNELLN-ISRESFYNLLELQTLVLSHNNISDIDYETFLA 239
Query: 288 LDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHN 347
L L L HN++ + + + L L +A+N V V+ +L LD S
Sbjct: 240 LPNLQYLDLSHNRLSGSAIRALQGIPDLVSLSIAYNPDVGVAMQEFVASWSLKELDASGT 299
Query: 348 FLRALTQDLITPLKSLQELRLDDN 371
L + L +S++ L+L DN
Sbjct: 300 GLCQVPAALA---QSVRTLKLSDN 320
Score = 55 (24.4 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 23/82 (28%), Positives = 39/82 (47%)
Query: 618 VAQQEDD-INRNNS-DS----RYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKL 671
+AQ EDD + R +S R + ++ + L SL+ L + HNQ + A GL L
Sbjct: 346 IAQVEDDALGRLELLESLFLDRNLLMRVPSSLPPSLEHLFLQHNQIMELPPQAFVGLVNL 405
Query: 672 TSLSCHHNQIDVLEDHSFSNVI 693
+L +N++ L S ++
Sbjct: 406 QTLDLSNNRLIFLPPLSLPKLL 427
Score = 50 (22.7 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 12/55 (21%), Positives = 24/55 (43%)
Query: 638 QATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
Q L S++ L ++ N ++ G + L L H++I +ED + +
Sbjct: 303 QVPAALAQSVRTLKLSDNWLKAINCGDMDSYPLLQYLDLSHSRIAQVEDDALGRL 357
Score = 46 (21.3 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 647 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 679
L+ L ++H++ + V AL L+ L SL N
Sbjct: 336 LQYLDLSHSRIAQVEDDALGRLELLESLFLDRN 368
Score = 38 (18.4 bits), Expect = 3.4e-16, Sum P(2) = 3.4e-16
Identities = 8/29 (27%), Positives = 17/29 (58%)
Query: 495 IDGDVIVQKNTNCSRPWVSLKQLPWSPKY 523
I+GD + +P +S+K++ +S K+
Sbjct: 833 INGDTKSPAKGHKKKPSLSIKKMTYSTKH 861
>UNIPROTKB|A1A4H9 [details] [associations]
symbol:LRRTM1 "Leucine-rich repeat transmembrane neuronal
protein 1" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372
SMART:SM00013 EMBL:BC126503 IPI:IPI00706066 RefSeq:NP_001073773.1
UniGene:Bt.34711 ProteinModelPortal:A1A4H9 PRIDE:A1A4H9
GeneID:538452 KEGG:bta:538452 CTD:347730 HOGENOM:HOG000290681
HOVERGEN:HBG052362 InParanoid:A1A4H9 KO:K16665 OrthoDB:EOG4FN4HG
NextBio:20877367 Uniprot:A1A4H9
Length = 521
Score = 232 (86.7 bits), Expect = 3.6e-16, P = 3.6e-16
Identities = 75/240 (31%), Positives = 113/240 (47%)
Query: 143 SPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYN 202
S L L L N LS + L L L L HN + ++ +F+ L + L LS N
Sbjct: 65 SGLLGLSLRYNSLSELRAGQFTGLM-QLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSN 123
Query: 203 KLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVP 262
++ L+ P+ LR + L N+L GLR +T L + N + P +
Sbjct: 124 QITQLANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQ--FVPVRIF 181
Query: 263 R-LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 321
+ SLK L I +NQ S+ R + AGL KLT L HN + + F L +L L L
Sbjct: 182 QDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLR 241
Query: 322 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS-MEPECI 380
N+ VA+ +SL + NL +DLS N + + + + LQ L+LD N ++ +EP +
Sbjct: 242 RNK-VAIVVSSLDWVWNLEKMDLSGNEIEYMEPHVFETVPHLQSLQLDSNRLTYVEPRIL 300
Score = 230 (86.0 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 82/273 (30%), Positives = 120/273 (43%)
Query: 99 LLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVV 158
LL C N+T P L G L GL + L + G F GL L L L +N + V
Sbjct: 49 LLYCEALNLTEAPHN-LSG--LLGLSLRYNSLSELRAGQFTGLMQ-LTWLYLDHNHICSV 104
Query: 159 PTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTL 218
A L + L LS NQ+ +L NT+F+ + +L +DLSYNKL L+ D L L
Sbjct: 105 QGDAFQKLR-RVKELTLSSNQITQLANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKL 163
Query: 219 RVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFS 278
L ++ N + V Q RS+ LD+ +N L L ++ L L L + HN
Sbjct: 164 TTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKS-LARNSFAGLFKLTELHLEHNDLV 222
Query: 279 SVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSN 338
V L L SL N++ ++ S + L +DL+ N I + + +
Sbjct: 223 KVNFAHFPRLISLHSLCLRRNKVAIVVS-SLDWVWNLEKMDLSGNEIEYMEPHVFETVPH 281
Query: 339 LTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
L +L L N L + ++ KSL + L N
Sbjct: 282 LQSLQLDSNRLTYVEPRILNSWKSLTSITLAGN 314
Score = 168 (64.2 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 56/185 (30%), Positives = 86/185 (46%)
Query: 191 LSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHN 250
LS L L L YN L L L+ L L L N + A Q LR V +L LS N
Sbjct: 64 LSGLLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSN 123
Query: 251 LLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFR 310
+ L +T + +L+ + +++N+ ++ GL KLT+L N I + F+
Sbjct: 124 QIT-QLANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQ 182
Query: 311 ALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDD 370
+L LD+ +N++ +++ S A L LT L L HN L + L SL L L
Sbjct: 183 DCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLRR 242
Query: 371 NDISM 375
N +++
Sbjct: 243 NKVAI 247
Score = 167 (63.8 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 41/118 (34%), Positives = 63/118 (53%)
Query: 264 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 323
LS L LS+ +N S +R G GL +LT L HN I ++ +F+ L + L L+ N
Sbjct: 64 LSGLLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSN 123
Query: 324 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIY 381
+I ++ + + NL ++DLS+N L+AL DL L+ L L + N I P I+
Sbjct: 124 QITQLANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIF 181
Score = 86 (35.3 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 646 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
SLK L I +NQ S+ R + AGL KLT L HN +
Sbjct: 186 SLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDL 221
Score = 42 (19.8 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L SL L + N+ + V +L + L + N+I+ +E H F V
Sbjct: 232 LISLHSLCLRRNKVAIVV-SSLDWVWNLEKMDLSGNEIEYMEPHVFETV 279
>UNIPROTKB|I3L5J3 [details] [associations]
symbol:LRRTM1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050808 "synapse organization" evidence=IEA]
[GO:0035418 "protein localization to synapse" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0007610 "behavior" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005783 GO:GO:0007610 GO:GO:0030424
InterPro:IPR003591 SMART:SM00369 GO:GO:0050808 GO:GO:0030426
InterPro:IPR000372 SMART:SM00013 GO:GO:0035418
GeneTree:ENSGT00700000104056 KO:K16665 OMA:EPDLFHG EMBL:CU928791
RefSeq:XP_003125000.1 Ensembl:ENSSSCT00000025495 GeneID:100520483
KEGG:ssc:100520483 Uniprot:I3L5J3
Length = 522
Score = 232 (86.7 bits), Expect = 3.6e-16, P = 3.6e-16
Identities = 75/240 (31%), Positives = 113/240 (47%)
Query: 143 SPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYN 202
S L L L N LS + L L L L HN + ++ +F+ L + L LS N
Sbjct: 65 SGLLGLSLRYNSLSELRAGQFTGLM-QLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSN 123
Query: 203 KLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVP 262
++ L+ P+ LR + L N+L GLR +T L + N + P +
Sbjct: 124 QITQLANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQ--FVPVRIF 181
Query: 263 R-LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 321
+ SLK L I +NQ S+ R + AGL KLT L HN + + F L +L L L
Sbjct: 182 QDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLR 241
Query: 322 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS-MEPECI 380
N+ VA+ +SL + NL +DLS N + + + + LQ L+LD N ++ +EP +
Sbjct: 242 RNK-VAIVVSSLDWVWNLEKMDLSGNEIEYMEPHVFETVPHLQSLQLDSNRLTYIEPRIL 300
Score = 231 (86.4 bits), Expect = 4.6e-16, P = 4.6e-16
Identities = 82/273 (30%), Positives = 120/273 (43%)
Query: 99 LLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVV 158
LL C N+T P L G L GL + L + G F GL L L L +N + V
Sbjct: 49 LLYCEALNLTEAPHN-LSG--LLGLSLRYNSLSELRAGQFTGLMQ-LTWLYLDHNHICSV 104
Query: 159 PTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTL 218
A L + L LS NQ+ +L NT+F+ + +L +DLSYNKL L+ D L L
Sbjct: 105 QGDAFQKLR-RVKELTLSSNQITQLANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKL 163
Query: 219 RVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFS 278
L ++ N + V Q RS+ LD+ +N L L ++ L L L + HN
Sbjct: 164 TTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKS-LARNSFAGLFKLTELHLEHNDLV 222
Query: 279 SVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSN 338
V L L SL N++ ++ S + L +DL+ N I + + +
Sbjct: 223 KVNFAHFPRLISLHSLCLRRNKVAIVVS-SLDWVWNLEKMDLSGNEIEYMEPHVFETVPH 281
Query: 339 LTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
L +L L N L + ++ KSL + L N
Sbjct: 282 LQSLQLDSNRLTYIEPRILNSWKSLTSITLAGN 314
Score = 168 (64.2 bits), Expect = 8.6e-09, Sum P(2) = 8.6e-09
Identities = 56/185 (30%), Positives = 86/185 (46%)
Query: 191 LSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHN 250
LS L L L YN L L L+ L L L N + A Q LR V +L LS N
Sbjct: 64 LSGLLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSN 123
Query: 251 LLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFR 310
+ L +T + +L+ + +++N+ ++ GL KLT+L N I + F+
Sbjct: 124 QIT-QLANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQ 182
Query: 311 ALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDD 370
+L LD+ +N++ +++ S A L LT L L HN L + L SL L L
Sbjct: 183 DCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLRR 242
Query: 371 NDISM 375
N +++
Sbjct: 243 NKVAI 247
Score = 167 (63.8 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 41/118 (34%), Positives = 63/118 (53%)
Query: 264 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 323
LS L LS+ +N S +R G GL +LT L HN I ++ +F+ L + L L+ N
Sbjct: 64 LSGLLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSN 123
Query: 324 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIY 381
+I ++ + + NL ++DLS+N L+AL DL L+ L L + N I P I+
Sbjct: 124 QITQLANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIF 181
Score = 86 (35.3 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 646 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
SLK L I +NQ S+ R + AGL KLT L HN +
Sbjct: 186 SLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDL 221
Score = 42 (19.8 bits), Expect = 8.6e-09, Sum P(2) = 8.6e-09
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L SL L + N+ + V +L + L + N+I+ +E H F V
Sbjct: 232 LISLHSLCLRRNKVAIVV-SSLDWVWNLEKMDLSGNEIEYMEPHVFETV 279
>MGI|MGI:2389173 [details] [associations]
symbol:Lrrtm1 "leucine rich repeat transmembrane neuronal 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005783 "endoplasmic reticulum" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007610 "behavior"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=ISS] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030424 "axon" evidence=ISO] [GO:0030426 "growth
cone" evidence=ISO] [GO:0035418 "protein localization to synapse"
evidence=IMP] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0050808 "synapse
organization" evidence=IGI;ISO;IMP] [GO:0060076 "excitatory
synapse" evidence=ISO] InterPro:IPR001611 PROSITE:PS51450
MGI:MGI:2389173 GO:GO:0005783 GO:GO:0016021 GO:GO:0005886
GO:GO:0007610 GO:GO:0030054 GO:GO:0045211 GO:GO:0030424
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0050808
GO:GO:0030426 InterPro:IPR000372 SMART:SM00013 GO:GO:0035418
GeneTree:ENSGT00700000104056 CTD:347730 HOGENOM:HOG000290681
HOVERGEN:HBG052362 KO:K16665 OrthoDB:EOG4FN4HG OMA:EPDLFHG
EMBL:AY182025 EMBL:AK053345 EMBL:AK053364 EMBL:AK136857
EMBL:BC027803 IPI:IPI00170022 RefSeq:NP_083156.2 UniGene:Mm.292568
ProteinModelPortal:Q8K377 SMR:Q8K377 IntAct:Q8K377 STRING:Q8K377
PhosphoSite:Q8K377 PaxDb:Q8K377 PRIDE:Q8K377
Ensembl:ENSMUST00000020400 Ensembl:ENSMUST00000159616
Ensembl:ENSMUST00000161677 GeneID:74342 KEGG:mmu:74342
UCSC:uc009cjt.1 InParanoid:Q8K377 NextBio:340493 Bgee:Q8K377
CleanEx:MM_LRRTM1 Genevestigator:Q8K377
GermOnline:ENSMUSG00000060780 Uniprot:Q8K377
Length = 522
Score = 232 (86.7 bits), Expect = 3.6e-16, P = 3.6e-16
Identities = 83/273 (30%), Positives = 119/273 (43%)
Query: 99 LLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVV 158
LL C N+T P L G L GL + L + G F GL L L L +N + V
Sbjct: 49 LLYCEALNLTEAPHN-LSG--LLGLSLRYNSLSELRAGQFTGLMQ-LTWLYLDHNHICSV 104
Query: 159 PTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTL 218
A L + L LS NQ+ +L NT+F+ + +L +DLSYNKL L+ D L L
Sbjct: 105 QGDAFQKLR-RVKELTLSSNQITELANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKL 163
Query: 219 RVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFS 278
L ++ N + V Q RS+ LD+ +N L L ++ L L L + HN
Sbjct: 164 TTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKS-LARNSFAGLFKLTELHLEHNDLI 222
Query: 279 SVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSN 338
V L L SL N++ ++ S + L +DL+ N I + +
Sbjct: 223 KVNFAHFPRLISLHSLCLRRNKVAIVVS-SLDWVWNLEKMDLSGNEIEYMEPHVFETVPY 281
Query: 339 LTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
L TL L N L + ++ KSL + L N
Sbjct: 282 LQTLQLDSNRLTYIEPRILNSWKSLTSITLAGN 314
Score = 230 (86.0 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 75/240 (31%), Positives = 113/240 (47%)
Query: 143 SPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYN 202
S L L L N LS + L L L L HN + ++ +F+ L + L LS N
Sbjct: 65 SGLLGLSLRYNSLSELRAGQFTGLM-QLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSN 123
Query: 203 KLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVP 262
++ L+ P+ LR + L N+L GLR +T L + N + P +
Sbjct: 124 QITELANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQ--FVPVRIF 181
Query: 263 R-LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 321
+ SLK L I +NQ S+ R + AGL KLT L HN + + F L +L L L
Sbjct: 182 QDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLIKVNFAHFPRLISLHSLCLR 241
Query: 322 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS-MEPECI 380
N+ VA+ +SL + NL +DLS N + + + + LQ L+LD N ++ +EP +
Sbjct: 242 RNK-VAIVVSSLDWVWNLEKMDLSGNEIEYMEPHVFETVPYLQTLQLDSNRLTYIEPRIL 300
Score = 168 (64.2 bits), Expect = 8.6e-09, Sum P(2) = 8.6e-09
Identities = 56/185 (30%), Positives = 86/185 (46%)
Query: 191 LSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHN 250
LS L L L YN L L L+ L L L N + A Q LR V +L LS N
Sbjct: 64 LSGLLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSN 123
Query: 251 LLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFR 310
+ L +T + +L+ + +++N+ ++ GL KLT+L N I + F+
Sbjct: 124 QIT-ELANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQ 182
Query: 311 ALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDD 370
+L LD+ +N++ +++ S A L LT L L HN L + L SL L L
Sbjct: 183 DCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLIKVNFAHFPRLISLHSLCLRR 242
Query: 371 NDISM 375
N +++
Sbjct: 243 NKVAI 247
Score = 167 (63.8 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 41/118 (34%), Positives = 63/118 (53%)
Query: 264 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 323
LS L LS+ +N S +R G GL +LT L HN I ++ +F+ L + L L+ N
Sbjct: 64 LSGLLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSN 123
Query: 324 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIY 381
+I ++ + + NL ++DLS+N L+AL DL L+ L L + N I P I+
Sbjct: 124 QITELANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIF 181
Score = 86 (35.3 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 646 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
SLK L I +NQ S+ R + AGL KLT L HN +
Sbjct: 186 SLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDL 221
Score = 42 (19.8 bits), Expect = 8.6e-09, Sum P(2) = 8.6e-09
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L SL L + N+ + V +L + L + N+I+ +E H F V
Sbjct: 232 LISLHSLCLRRNKVAIVV-SSLDWVWNLEKMDLSGNEIEYMEPHVFETV 279
>DICTYBASE|DDB_G0278509 [details] [associations]
symbol:DDB_G0278509 "MLK family protein kinase
DDB_G0278509" species:44689 "Dictyostelium discoideum" [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0006468 "protein phosphorylation" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000719 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 PROSITE:PS51450 dictyBase:DDB_G0278509
GO:GO:0005524 EMBL:AAFI02000023 SUPFAM:SSF56112 GO:GO:0004674
eggNOG:COG4886 InterPro:IPR025875 Pfam:PF12799 HSSP:P25147
ProtClustDB:CLSZ2846780 RefSeq:XP_642407.1
ProteinModelPortal:Q54XZ5 EnsemblProtists:DDB0220138 GeneID:8621612
KEGG:ddi:DDB_G0278509 OMA:LEIPENC Uniprot:Q54XZ5
Length = 1248
Score = 250 (93.1 bits), Expect = 4.3e-16, Sum P(2) = 4.3e-16
Identities = 92/290 (31%), Positives = 150/290 (51%)
Query: 125 ISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYK-- 182
+S +K+I AF +S+ L+ L + NN LS VP+S +L LDLSHN L++
Sbjct: 417 LSFNNIKSIPLDAFTNISN-LEQLIMFNNNLSDVPSSI--EFLKHLTILDLSHNNLHEIC 473
Query: 183 -------------LENTSFK------GLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRL 223
L N S K L +L L L N++ T+ +C+ PL+ L+ L L
Sbjct: 474 RELGNLSFLRELYLSNNSLKKFPTTGNLYNLKKLILDNNQITTIPIECVEPLIQLQTLDL 533
Query: 224 QGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRG 283
N+ + + + + T ++N G G S ++ +LK L+++HN+ +
Sbjct: 534 SFNK--IGTITSSTTTTTTTTTTNNNNNNGG--GGSIYQKMKNLKQLNLSHNELQEIP-S 588
Query: 284 ALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLD 343
+L L KL SLS +NQI VL D +LS L+ L +++N+I + A + +LS+L L+
Sbjct: 589 SLRHLSKLHSLSIDYNQISVLPDKVVASLSRLAKLTISNNKIKQLPFA-INNLSSLIELN 647
Query: 344 LSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNT--MDLEL 391
S+N + L D I L +L++L L++N++ P I GF T +DL+L
Sbjct: 648 ASNNVIELLP-DSICYLSNLKKLNLNNNNLKELPSNI--GFLTKLVDLQL 694
Score = 159 (61.0 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 43/136 (31%), Positives = 76/136 (55%)
Query: 169 NLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRL 228
NL +L+LSHN+L ++ + S + LS L+ L + YN++ L +A L L L + N++
Sbjct: 572 NLKQLNLSHNELQEIPS-SLRHLSKLHSLSIDYNQISVLPDKVVASLSRLAKLTISNNKI 630
Query: 229 TVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGL 288
+ A+ L S+ +L+ S+N++ L P ++ LS+LK L++ +N + + L
Sbjct: 631 K-QLPFAINNLSSLIELNASNNVIE--LLPDSICYLSNLKKLNLNNNNLKELPSN-IGFL 686
Query: 289 DKLTSLSCHHNQIDVL 304
KL L ++NQI L
Sbjct: 687 TKLVDLQLYNNQISSL 702
Score = 145 (56.1 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 54/210 (25%), Positives = 99/210 (47%)
Query: 173 LDLSHNQLYKLENTSFKGL-SSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVS 231
LDLS +L + K + +DLS+N + ++ D + L L + N L+
Sbjct: 390 LDLSEQELNEFPIFDEKEIVQGYKIIDLSFNNIKSIPLDAFTNISNLEQLIMFNNNLS-D 448
Query: 232 VVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAG-LDK 290
V ++++ L+ +T LDLSHN L + LS L+ L +++N S+++ G L
Sbjct: 449 VPSSIEFLKHLTILDLSHNNLHEIC--RELGNLSFLRELYLSNN---SLKKFPTTGNLYN 503
Query: 291 LTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLR 350
L L +NQI + L L LDL+ N+I ++ ++ + TT + ++N
Sbjct: 504 LKKLILDNNQITTIPIECVEPLIQLQTLDLSFNKIGTITSSTTTTTTTTTTNNNNNN--- 560
Query: 351 ALTQDLITPLKSLQELRLDDNDISMEPECI 380
+ +K+L++L L N++ P +
Sbjct: 561 GGGGSIYQKMKNLKQLNLSHNELQEIPSSL 590
Score = 79 (32.9 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLED 686
+ +LK L+++HN+ + +L L KL SLS +NQI VL D
Sbjct: 570 MKNLKQLNLSHNELQEIP-SSLRHLSKLHSLSIDYNQISVLPD 611
Score = 61 (26.5 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 18/57 (31%), Positives = 30/57 (52%)
Query: 628 NNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL 684
N S + ++ ++ LS L LSI +NQ S + +A L +L L+ +N+I L
Sbjct: 577 NLSHNELQEIPSSLRHLSKLHSLSIDYNQISVLPDKVVASLSRLAKLTISNNKIKQL 633
Score = 57 (25.1 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 629 NSDSRYVKLQATTIL-LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL 684
N+ + ++L +I LS+LK L++ +N + + L KL L ++NQI L
Sbjct: 647 NASNNVIELLPDSICYLSNLKKLNLNNNNLKELPSN-IGFLTKLVDLQLYNNQISSL 702
Score = 37 (18.1 bits), Expect = 4.3e-16, Sum P(2) = 4.3e-16
Identities = 6/13 (46%), Positives = 8/13 (61%)
Query: 392 IYSGVWRHSTLLI 404
+Y GVWR + I
Sbjct: 960 VYHGVWRSKDVAI 972
>UNIPROTKB|Q86UE6 [details] [associations]
symbol:LRRTM1 "Leucine-rich repeat transmembrane neuronal
protein 1" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0007610 "behavior" evidence=IEA] [GO:0035418 "protein
localization to synapse" evidence=IEA] [GO:0050808 "synapse
organization" evidence=IEA] [GO:0060076 "excitatory synapse"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030426
"growth cone" evidence=IDA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0009986 "cell surface" evidence=IDA] [GO:0030424 "axon"
evidence=IDA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005783 GO:GO:0016021
GO:GO:0005886 EMBL:CH471053 GO:GO:0007610 GO:GO:0030054
GO:GO:0045211 GO:GO:0030424 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 GO:GO:0050808 GO:GO:0030426 InterPro:IPR000372
SMART:SM00013 GO:GO:0035418 CTD:347730 HOGENOM:HOG000290681
HOVERGEN:HBG052362 KO:K16665 OrthoDB:EOG4FN4HG EMBL:AY182024
EMBL:AK056644 EMBL:AK290512 EMBL:AY358310 EMBL:BC045113
IPI:IPI00328716 RefSeq:NP_849161.2 UniGene:Hs.591580
ProteinModelPortal:Q86UE6 SMR:Q86UE6 MINT:MINT-7027295
STRING:Q86UE6 PhosphoSite:Q86UE6 DMDM:146330009 PRIDE:Q86UE6
DNASU:347730 Ensembl:ENST00000295057 Ensembl:ENST00000409148
Ensembl:ENST00000417012 Ensembl:ENST00000433224 GeneID:347730
KEGG:hsa:347730 UCSC:uc002sok.1 GeneCards:GC02M080427
H-InvDB:HIX0002207 HGNC:HGNC:19408 MIM:610867 neXtProt:NX_Q86UE6
PharmGKB:PA134887293 InParanoid:Q86UE6 OMA:EPDLFHG PhylomeDB:Q86UE6
GenomeRNAi:347730 NextBio:99250 ArrayExpress:Q86UE6 Bgee:Q86UE6
CleanEx:HS_LRRTM1 Genevestigator:Q86UE6 GermOnline:ENSG00000162951
Uniprot:Q86UE6
Length = 522
Score = 231 (86.4 bits), Expect = 4.6e-16, P = 4.6e-16
Identities = 82/273 (30%), Positives = 120/273 (43%)
Query: 99 LLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVV 158
LL C N+T P L G L GL + L + G F GL L L L +N + V
Sbjct: 49 LLYCEALNLTEAPHN-LSG--LLGLSLRYNSLSELRAGQFTGLMQ-LTWLYLDHNHICSV 104
Query: 159 PTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTL 218
A L + L LS NQ+ +L NT+F+ + +L +DLSYNKL L+ D L L
Sbjct: 105 QGDAFQKLR-RVKELTLSSNQITQLPNTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKL 163
Query: 219 RVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFS 278
L ++ N + V Q RS+ LD+ +N L L ++ L L L + HN
Sbjct: 164 TTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKS-LARNSFAGLFKLTELHLEHNDLV 222
Query: 279 SVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSN 338
V L L SL N++ ++ S + L +DL+ N I + + +
Sbjct: 223 KVNFAHFPRLISLHSLCLRRNKVAIVVS-SLDWVWNLEKMDLSGNEIEYMEPHVFETVPH 281
Query: 339 LTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
L +L L N L + ++ KSL + L N
Sbjct: 282 LQSLQLDSNRLTYIEPRILNSWKSLTSITLAGN 314
Score = 230 (86.0 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 75/240 (31%), Positives = 112/240 (46%)
Query: 143 SPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYN 202
S L L L N LS + L L L L HN + ++ +F+ L + L LS N
Sbjct: 65 SGLLGLSLRYNSLSELRAGQFTGLM-QLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSN 123
Query: 203 KLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVP 262
++ L P+ LR + L N+L GLR +T L + N + P +
Sbjct: 124 QITQLPNTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQ--FVPVRIF 181
Query: 263 R-LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 321
+ SLK L I +NQ S+ R + AGL KLT L HN + + F L +L L L
Sbjct: 182 QDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLR 241
Query: 322 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS-MEPECI 380
N+ VA+ +SL + NL +DLS N + + + + LQ L+LD N ++ +EP +
Sbjct: 242 RNK-VAIVVSSLDWVWNLEKMDLSGNEIEYMEPHVFETVPHLQSLQLDSNRLTYIEPRIL 300
Score = 166 (63.5 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 56/185 (30%), Positives = 86/185 (46%)
Query: 191 LSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHN 250
LS L L L YN L L L+ L L L N + A Q LR V +L LS N
Sbjct: 64 LSGLLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSN 123
Query: 251 LLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFR 310
+ L +T + +L+ + +++N+ ++ GL KLT+L N I + F+
Sbjct: 124 QIT-QLPNTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQ 182
Query: 311 ALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDD 370
+L LD+ +N++ +++ S A L LT L L HN L + L SL L L
Sbjct: 183 DCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLRR 242
Query: 371 NDISM 375
N +++
Sbjct: 243 NKVAI 247
Score = 165 (63.1 bits), Expect = 5.2e-13, Sum P(2) = 5.2e-13
Identities = 41/118 (34%), Positives = 62/118 (52%)
Query: 264 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 323
LS L LS+ +N S +R G GL +LT L HN I ++ +F+ L + L L+ N
Sbjct: 64 LSGLLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSN 123
Query: 324 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIY 381
+I + + + NL ++DLS+N L+AL DL L+ L L + N I P I+
Sbjct: 124 QITQLPNTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIF 181
Score = 86 (35.3 bits), Expect = 5.2e-13, Sum P(2) = 5.2e-13
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 646 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
SLK L I +NQ S+ R + AGL KLT L HN +
Sbjct: 186 SLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDL 221
Score = 42 (19.8 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L SL L + N+ + V +L + L + N+I+ +E H F V
Sbjct: 232 LISLHSLCLRRNKVAIVV-SSLDWVWNLEKMDLSGNEIEYMEPHVFETV 279
>FB|FBgn0000313 [details] [associations]
symbol:chp "chaoptic" species:7227 "Drosophila melanogaster"
[GO:0005886 "plasma membrane" evidence=NAS;IDA] [GO:0007156
"homophilic cell adhesion" evidence=NAS;IDA] [GO:0042051 "compound
eye photoreceptor development" evidence=NAS] [GO:0042052
"rhabdomere development" evidence=IGI] [GO:0016028 "rhabdomere"
evidence=IDA] Pfam:PF00560 InterPro:IPR000225 InterPro:IPR001611
PROSITE:PS51450 EMBL:AE014297 GO:GO:0005886 GO:GO:0007601
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0050896
GO:GO:0007156 GO:GO:0016028 HOGENOM:HOG000265621 GO:GO:0042052
GeneTree:ENSGT00700000104056 EMBL:M19017 EMBL:M19008 EMBL:M19009
EMBL:M19010 EMBL:M19011 EMBL:M19012 EMBL:M19013 EMBL:M19014
EMBL:M19016 EMBL:K03274 PIR:A29944 RefSeq:NP_524605.1
UniGene:Dm.21698 ProteinModelPortal:P12024 SMR:P12024 STRING:P12024
PaxDb:P12024 PRIDE:P12024 EnsemblMetazoa:FBtr0085778
EnsemblMetazoa:FBtr0330099 GeneID:43690 KEGG:dme:Dmel_CG1744
CTD:64152 FlyBase:FBgn0000313 InParanoid:P12024 OMA:LSHNDEL
OrthoDB:EOG4VQ844 PhylomeDB:P12024 ChiTaRS:CHP GenomeRNAi:43690
NextBio:835267 Bgee:P12024 GermOnline:CG1744 Uniprot:P12024
Length = 1315
Score = 208 (78.3 bits), Expect = 4.9e-16, Sum P(2) = 4.9e-16
Identities = 76/262 (29%), Positives = 122/262 (46%)
Query: 70 HTLRCTANKS--DLYAIS------ESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLH 121
+ + CT +KS DL + +L + +V +L + + + FL+ ++
Sbjct: 46 YNVMCTCSKSSTDLGIVHCKNVPFPALPRMVNQSKVFMLHMENTGLREIEPYFLQSTGMY 105
Query: 122 GLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLY 181
L IS L I D AF GL L L LP N L +P+ +L L L LDL +N +
Sbjct: 106 RLKISGNHLTEIPDDAFTGLERSLWELILPQNDLVEIPSKSLRHLQ-KLRHLDLGYNHIT 164
Query: 182 KLENTSFKGLS-SLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRL-TVSVVAALQGL 239
+++ SF+GL SL L L N + L + L+ L L L GN L + + G+
Sbjct: 165 HIQHDSFRGLEDSLQTLILRENCISQLMSHSFSGLLILETLDLSGNNLFEIDPNVFVDGM 224
Query: 240 RSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSC--- 296
+T L L+ N+L+ + + L SL+ L I+HN S+ + T L+
Sbjct: 225 PRLTRLLLTDNILS-EIPYDALGPLKSLRTLDISHNVIWSLSGNETYEIKASTKLNLDNL 283
Query: 297 H--HNQIDVLEDHSFRALSTLS 316
H +N I+VL +SF+ T++
Sbjct: 284 HLEYNHIEVLPPNSFKYFDTVN 305
Score = 207 (77.9 bits), Expect = 8.9e-13, P = 8.9e-13
Identities = 67/243 (27%), Positives = 111/243 (45%)
Query: 143 SPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYN 202
S ++ L L +N +S++ P +L L L +N L F + L +LDLSYN
Sbjct: 707 SNIKILDLSHNNISIIHPGYFRPAEISLTHLHLGYNSLMNTTRDVFGNMPHLQWLDLSYN 766
Query: 203 KLMTLSQDCLAPLVTLRVLRLQGNRLT---VSVVAALQGLRSVTDLDLSHNLLAGPLGPS 259
+ L D L+++ N L+ + +QGLR V D SHN L G P
Sbjct: 767 WIHELDFDAFKNTKQLQLVFFGHNYLSDIPQDIFKPVQGLRIV---DFSHNHLRGL--PD 821
Query: 260 TVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF---RALSTLS 316
+ ++ L ++HN + +L+ L LT H + + HS +L
Sbjct: 822 NLFYNGGMEKLDVSHNMMLKIPSSSLSSLAALTLCELHLSNNFISTIHSMDLSNKFRSLR 881
Query: 317 HLDLAHNRIVAVSGASLAHLSNLTTLDLSHNF-LRALTQDLITPLKSLQELRLDDNDISM 375
+LD+++N ++ + A A + L LDLSHN L+ + + + SL +L L++ +S
Sbjct: 882 YLDISYNYLLRIDDAVFATMPKLAVLDLSHNRDLKVMDKSFMGLENSLIKLGLENISLST 941
Query: 376 EPE 378
PE
Sbjct: 942 VPE 944
Score = 194 (73.4 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 76/288 (26%), Positives = 131/288 (45%)
Query: 108 TVLPGKFLEGVT-LHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLS-VVPTSALAP 165
+ LP + L +T L L S+ + ++SD +F L + L+ L L +N + V+ +
Sbjct: 515 SALPAEPLRHLTSLQELDFSNNHISSMSDTSFHFLKN-LRLLELHDNRIEQVLKGTFQGD 573
Query: 166 LAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQG 225
+ L+ + L N L + +F L +L L L NK+ + + L L L L+G
Sbjct: 574 IHSKLEEISLRFNHLTSISQHTFFDLEALRKLHLDDNKIDKIERRAFMNLDELEYLSLRG 633
Query: 226 NRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGP--STVPRLSSLKVLSIAHNQFSSVR-- 281
N++ + Q L + LD++ N L V LS+L V +++HNQ +
Sbjct: 634 NKINNLADESFQNLPKLEILDMAFNQLPNFNFDYFDQVGTLSNLNV-NVSHNQIRQLMYN 692
Query: 282 -----RGALAGL--DKLTSLSCHHNQIDVLEDHSFR-ALSTLSHLDLAHNRIVAVSGASL 333
R G+ + L HN I ++ FR A +L+HL L +N ++ +
Sbjct: 693 SSWSGRNEHGGMYHSNIKILDLSHNNISIIHPGYFRPAEISLTHLHLGYNSLMNTTRDVF 752
Query: 334 AHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIY 381
++ +L LDLS+N++ L D K LQ + N +S P+ I+
Sbjct: 753 GNMPHLQWLDLSYNWIHELDFDAFKNTKQLQLVFFGHNYLSDIPQDIF 800
Score = 187 (70.9 bits), Expect = 7.3e-11, Sum P(2) = 7.3e-11
Identities = 76/341 (22%), Positives = 152/341 (44%)
Query: 85 SESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIG-LSS 143
+E LR L + + + +S+++ FL+ + L L + ++ + G F G + S
Sbjct: 519 AEPLRHLTSLQELDFSNNHISSMSDTSFHFLKNLRL--LELHDNRIEQVLKGTFQGDIHS 576
Query: 144 PLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNK 203
L+ + L N L+ + L L +L L N++ K+E +F L L +L L NK
Sbjct: 577 KLEEISLRFNHLTSISQHTFFDLEA-LRKLHLDDNKIDKIERRAFMNLDELEYLSLRGNK 635
Query: 204 LMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDL--SHNLLAGPLGPSTV 261
+ L+ + L L +L + N+L + ++++L++ SHN + + S+
Sbjct: 636 INNLADESFQNLPKLEILDMAFNQLPNFNFDYFDQVGTLSNLNVNVSHNQIRQLMYNSSW 695
Query: 262 PRL--------SSLKVLSIAHNQFSSVRRGALAGLD-KLTSLSCHHNQIDVLEDHSFRAL 312
S++K+L ++HN S + G + LT L +N + F +
Sbjct: 696 SGRNEHGGMYHSNIKILDLSHNNISIIHPGYFRPAEISLTHLHLGYNSLMNTTRDVFGNM 755
Query: 313 STLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDND 372
L LDL++N I + + + L + HN+L + QD+ P++ L+ + N
Sbjct: 756 PHLQWLDLSYNWIHELDFDAFKNTKQLQLVFFGHNYLSDIPQDIFKPVQGLRIVDFSHNH 815
Query: 373 ISMEPECIYVGFNTMDLELIYSGVWR--HSTLLIPVMLSLC 411
+ P+ ++ L++ ++ + + S+L L+LC
Sbjct: 816 LRGLPDNLFYNGGMEKLDVSHNMMLKIPSSSLSSLAALTLC 856
Score = 177 (67.4 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 73/286 (25%), Positives = 127/286 (44%)
Query: 97 VSLLDCTLSNVTVL-PGKFLEG-VTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNL 154
+ +LD + +N++++ PG F ++L L + L N + F G LQ L L N
Sbjct: 709 IKILDLSHNNISIIHPGYFRPAEISLTHLHLGYNSLMNTTRDVF-GNMPHLQWLDLSYNW 767
Query: 155 LSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAP 214
+ + A L + HN L + FK + L +D S+N L L D L
Sbjct: 768 IHELDFDAFKN-TKQLQLVFFGHNYLSDIPQDIFKPVQGLRIVDFSHNHLRGLP-DNLFY 825
Query: 215 LVTLRVLRLQGNRLTVSVVAALQGLRSVT--DLDLSHNLLAGPLGPSTVPRLSSLKVLSI 272
+ L + N + ++L L ++T +L LS+N ++ + SL+ L I
Sbjct: 826 NGGMEKLDVSHNMMLKIPSSSLSSLAALTLCELHLSNNFISTIHSMDLSNKFRSLRYLDI 885
Query: 273 AHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRAL-STLSHLDLAHNRIVAVSGA 331
++N + A + KL L HN+ + D SF L ++L L L + +++S
Sbjct: 886 SYNYLLRIDDAVFATMPKLAVLDLSHNRDLKVMDKSFMGLENSLIKLGLEN---ISLSTV 942
Query: 332 SLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEP 377
L L L +N L ++ Q+L + +L+ L L +ND++ P
Sbjct: 943 PEIRLKYLREFRLGYNELPSIPQELAHNMSNLRMLDLSNNDLTNVP 988
Score = 162 (62.1 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 62/232 (26%), Positives = 103/232 (44%)
Query: 142 SSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSY 201
S+ + L + N L+ +P A L +L L L N L ++ + S + L L LDL Y
Sbjct: 101 STGMYRLKISGNHLTEIPDDAFTGLERSLWELILPQNDLVEIPSKSLRHLQKLRHLDLGY 160
Query: 202 NKLMTLSQDCLAPLV-TLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPST 260
N + + D L +L+ L L+ N ++ + + GL + LDLS N L + P+
Sbjct: 161 NHITHIQHDSFRGLEDSLQTLILRENCISQLMSHSFSGLLILETLDLSGNNLF-EIDPNV 219
Query: 261 -VPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL---EDHSFRALSTLS 316
V + L L + N S + AL L L +L HN I L E + +A + L+
Sbjct: 220 FVDGMPRLTRLLLTDNILSEIPYDALGPLKSLRTLDISHNVIWSLSGNETYEIKASTKLN 279
Query: 317 --HLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQEL 366
+L L +N I + S + + N + L +D P + ++E+
Sbjct: 280 LDNLHLEYNHIEVLPPNSFKYFDTVNRTFFDGNPIHTLREDAFKPAR-IREI 330
Score = 157 (60.3 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 63/253 (24%), Positives = 109/253 (43%)
Query: 120 LHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQ 179
+ L IS ++ F L+ L + LS + + A + L RLD S N
Sbjct: 429 MRSLSISRLGSSSVGPEDFKDFGVELEDLQITRASLSGIQSHAFKHVR-GLKRLDFSENG 487
Query: 180 LYKLENTSFKGLS-SLNFLDLSYNKL-MTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQ 237
+ +EN +F + SL L +S+ L + L L +L+ L N ++ +
Sbjct: 488 ISSIENDAFHEIGHSLISLKMSHGYSGSALPAEPLRHLTSLQELDFSNNHISSMSDTSFH 547
Query: 238 GLRSVTDLDLSHNLLAGPL-GPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSC 296
L+++ L+L N + L G S L+ +S+ N +S+ + L+ L L
Sbjct: 548 FLKNLRLLELHDNRIEQVLKGTFQGDIHSKLEEISLRFNHLTSISQHTFFDLEALRKLHL 607
Query: 297 HHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDL 356
N+ID +E +F L L +L L N+I ++ S +L L LD++ N L D
Sbjct: 608 DDNKIDKIERRAFMNLDELEYLSLRGNKINNLADESFQNLPKLEILDMAFNQLPNFNFDY 667
Query: 357 ITPLKSLQELRLD 369
+ +L L ++
Sbjct: 668 FDQVGTLSNLNVN 680
Score = 131 (51.2 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 59/233 (25%), Positives = 98/233 (42%)
Query: 172 RLDLSHNQLYKLENTSFKGLS-SLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTV 230
RL +S N L ++ + +F GL SL L L N L+ + L L LR L L N +T
Sbjct: 106 RLKISGNHLTEIPDDAFTGLERSLWELILPQNDLVEIPSKSLRHLQKLRHLDLGYNHITH 165
Query: 231 SVVAALQGLR-SVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALA-GL 288
+ +GL S+ L L N ++ + S L L+ L ++ N + G+
Sbjct: 166 IQHDSFRGLEDSLQTLILRENCISQLMSHS-FSGLLILETLDLSGNNLFEIDPNVFVDGM 224
Query: 289 DKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLS-----NLTTLD 343
+LT L N + + + L +L LD++HN I ++SG + NL L
Sbjct: 225 PRLTRLLLTDNILSEIPYDALGPLKSLRTLDISHNVIWSLSGNETYEIKASTKLNLDNLH 284
Query: 344 LSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELIYSGV 396
L +N + L + ++ D N I E + ++ + Y G+
Sbjct: 285 LEYNHIEVLPPNSFKYFDTVNRTFFDGNPIHTLREDAFKPARIREIYMRYCGL 337
Score = 114 (45.2 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 84/333 (25%), Positives = 142/333 (42%)
Query: 84 ISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVT-LHGLVISSGELKNISDGAFIGLS 142
+S S GL E + L L + P F++G+ L L+++ L I A L
Sbjct: 192 MSHSFSGLLILETLDLSGNNLFEID--PNVFVDGMPRLTRLLLTDNILSEIPYDALGPLK 249
Query: 143 SPLQALGLPNNL---LSVVPTSAL-APLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLD 198
S L+ L + +N+ LS T + A NLD L L +N + L SFK ++N
Sbjct: 250 S-LRTLDISHNVIWSLSGNETYEIKASTKLNLDNLHLEYNHIEVLPPNSFKYFDTVNRTF 308
Query: 199 LSYNKLMTLSQDCLAPLVTLRVLRLQGNRLT-VSVVAALQGLRSVTDLDLSHNLLAGPLG 257
N + TL +D P +R + ++ LT +S VA + S+ LDLS N L L
Sbjct: 309 FDGNPIHTLREDAFKP-ARIREIYMRYCGLTNISPVAFDSLVNSLQILDLSGNNLT-KLH 366
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRA-LSTLS 316
L+V+S+ N+ + T L ++D+ D + L TL
Sbjct: 367 HKLFNNFDVLRVISMRDNKIKIQKPTETFNAVHYTLL-----KLDLSGDRNDPTNLQTLR 421
Query: 317 HLDLAHN-RIVAVS--GASLAHLSN-------LTTLDLSHNFLRALTQDLITPLKSLQEL 366
++ N R +++S G+S + L L ++ L + ++ L+ L
Sbjct: 422 NMTRMRNMRSLSISRLGSSSVGPEDFKDFGVELEDLQITRASLSGIQSHAFKHVRGLKRL 481
Query: 367 RLDDNDIS-MEPECIY-VGFNTMDLELI--YSG 395
+N IS +E + + +G + + L++ YSG
Sbjct: 482 DFSENGISSIENDAFHEIGHSLISLKMSHGYSG 514
Score = 81 (33.6 bits), Expect = 4.9e-16, Sum P(2) = 4.9e-16
Identities = 20/55 (36%), Positives = 29/55 (52%)
Query: 638 QATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
Q T L +L+ L + N+ + R A LD+L LS N+I+ L D SF N+
Sbjct: 593 QHTFFDLEALRKLHLDDNKIDKIERRAFMNLDELEYLSLRGNKINNLADESFQNL 647
Score = 63 (27.2 bits), Expect = 3.7e-14, Sum P(2) = 3.7e-14
Identities = 14/48 (29%), Positives = 25/48 (52%)
Query: 645 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
S L+ +S+ N +S+ + L+ L L N+ID +E +F N+
Sbjct: 576 SKLEEISLRFNHLTSISQHTFFDLEALRKLHLDDNKIDKIERRAFMNL 623
Score = 53 (23.7 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 646 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
SL+ L I++N + A + KL L HN+ + D SF
Sbjct: 879 SLRYLDISYNYLLRIDDAVFATMPKLAVLDLSHNRDLKVMDKSF 922
Score = 52 (23.4 bits), Expect = 5.1e-13, Sum P(2) = 5.1e-13
Identities = 15/50 (30%), Positives = 25/50 (50%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNVI 693
L+SL+ L ++N SS+ + L L L H N+I+ + +F I
Sbjct: 525 LTSLQELDFSNNHISSMSDTSFHFLKNLRLLELHDNRIEQVLKGTFQGDI 574
Score = 50 (22.7 bits), Expect = 8.2e-13, Sum P(2) = 8.2e-13
Identities = 11/38 (28%), Positives = 20/38 (52%)
Query: 645 SSLKVLSIAHNQFSSVRRGALAGLD-KLTSLSCHHNQI 681
S++K+L ++HN S + G + LT L +N +
Sbjct: 707 SNIKILDLSHNNISIIHPGYFRPAEISLTHLHLGYNSL 744
Score = 49 (22.3 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 11/51 (21%), Positives = 24/51 (47%)
Query: 643 LLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNVI 693
L++SL++L ++ N + + D L +S N+I + + N +
Sbjct: 348 LVNSLQILDLSGNNLTKLHHKLFNNFDVLRVISMRDNKIKIQKPTETFNAV 398
Score = 48 (22.0 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 12/47 (25%), Positives = 21/47 (44%)
Query: 647 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCH--HNQIDVLEDHSFSN 691
++ L ++HN + +L+ L LT H +N I + SN
Sbjct: 829 MEKLDVSHNMMLKIPSSSLSSLAALTLCELHLSNNFISTIHSMDLSN 875
Score = 47 (21.6 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 13/52 (25%), Positives = 26/52 (50%)
Query: 631 DSRYVKLQATTIL-LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
D++ K++ + L L+ LS+ N+ +++ + L KL L NQ+
Sbjct: 609 DNKIDKIERRAFMNLDELEYLSLRGNKINNLADESFQNLPKLEILDMAFNQL 660
Score = 46 (21.3 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 11/45 (24%), Positives = 20/45 (44%)
Query: 647 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSN 691
L+++ HN S + + + L + HN + L D+ F N
Sbjct: 782 LQLVFFGHNYLSDIPQDIFKPVQGLRIVDFSHNHLRGLPDNLFYN 826
Score = 44 (20.5 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 12/46 (26%), Positives = 19/46 (41%)
Query: 646 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSN 691
SL L + +N + R + L L +N I L+ +F N
Sbjct: 733 SLTHLHLGYNSLMNTTRDVFGNMPHLQWLDLSYNWIHELDFDAFKN 778
>ZFIN|ZDB-GENE-080327-5 [details] [associations]
symbol:sc:d0316 "sc:d0316" species:7955 "Danio rerio"
[GO:0050770 "regulation of axonogenesis" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026878
PROSITE:PS50835 PROSITE:PS51450 ZFIN:ZDB-GENE-080327-5
GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0050770
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101682 PANTHER:PTHR24369:SF8 EMBL:CR388018
IPI:IPI00485297 RefSeq:XP_692888.2 UniGene:Dr.142090
Ensembl:ENSDART00000021605 GeneID:564462 KEGG:dre:564462 CTD:564462
NextBio:20885393 Bgee:F1QCU7 Uniprot:F1QCU7
Length = 631
Score = 232 (86.7 bits), Expect = 5.5e-16, P = 5.5e-16
Identities = 73/242 (30%), Positives = 114/242 (47%)
Query: 130 LKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFK 189
LK++ DG +S+ + L L +N + V+ + L +L+ L LS N + +E +F
Sbjct: 68 LKDVPDG----VSTNTRYLNLQDNQIQVIKVDSFKHLR-HLEILQLSRNHIRNIEIGAFN 122
Query: 190 GLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSH 249
GL+SLN L+L N+L T+ L L+ L L+ N + A L S+ LDL
Sbjct: 123 GLTSLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSDAFSRLPSLRRLDLGE 182
Query: 250 NLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 309
+ LS+L+ L++ V + L +L L NQ+ V++ SF
Sbjct: 183 LKRLSYISSGAFQGLSNLRYLNLGMCNLKEVPN--IQPLIRLDELEMSGNQLTVIQPSSF 240
Query: 310 RALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLD 369
+ L L L + H ++ + S L +L L+L+HN L L DL TPL LQ + L
Sbjct: 241 KGLVHLQKLWMMHAQVQTIERNSFDDLHSLRELNLAHNNLTFLPHDLYTPLHHLQRVHLH 300
Query: 370 DN 371
N
Sbjct: 301 HN 302
Score = 189 (71.6 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 73/261 (27%), Positives = 116/261 (44%)
Query: 69 PHTLRCTANKSDLYAISESLR----GLEPDER-VSLLDCTLSNVTVLPGKFLEGVTLHGL 123
P C+ S + L+ G+ + R ++L D + + V K L + + L
Sbjct: 49 PSVCSCSNQFSKVICTRRGLKDVPDGVSTNTRYLNLQDNQIQVIKVDSFKHLRHLEI--L 106
Query: 124 VISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKL 183
+S ++NI GAF GL+S L L L +N L+ +P A L+ L L L +N + +
Sbjct: 107 QLSRNHIRNIEIGAFNGLTS-LNTLELFDNRLTTIPNGAFEYLS-KLKELWLRNNPIESI 164
Query: 184 ENTSFKGLSSLNFLDLS-YNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSV 242
+ +F L SL LDL +L +S L LR L L + V +Q L +
Sbjct: 165 PSDAFSRLPSLRRLDLGELKRLSYISSGAFQGLSNLRYLNL--GMCNLKEVPNIQPLIRL 222
Query: 243 TDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID 302
+L++S N L + PS+ L L+ L + H Q ++ R + L L L+ HN +
Sbjct: 223 DELEMSGNQLT-VIQPSSFKGLVHLQKLWMMHAQVQTIERNSFDDLHSLRELNLAHNNLT 281
Query: 303 VLEDHSFRALSTLSHLDLAHN 323
L + L L + L HN
Sbjct: 282 FLPHDLYTPLHHLQRVHLHHN 302
>UNIPROTKB|Q6UXM1 [details] [associations]
symbol:LRIG3 "Leucine-rich repeats and immunoglobulin-like
domains protein 3" species:9606 "Homo sapiens" [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 CleanEx:HS_LIG3
HOGENOM:HOG000113380 HOVERGEN:HBG052353 EMBL:AY505340 EMBL:AY358288
EMBL:AY358295 EMBL:AK074921 IPI:IPI00184265 IPI:IPI00640455
RefSeq:NP_001129523.1 RefSeq:NP_700356.2 UniGene:Hs.253736
ProteinModelPortal:Q6UXM1 SMR:Q6UXM1 STRING:Q6UXM1
PhosphoSite:Q6UXM1 DMDM:73621176 PaxDb:Q6UXM1 PRIDE:Q6UXM1
Ensembl:ENST00000320743 Ensembl:ENST00000379141 GeneID:121227
KEGG:hsa:121227 UCSC:uc001sqr.3 UCSC:uc009zqh.3 CTD:121227
GeneCards:GC12M059265 HGNC:HGNC:30991 HPA:HPA010773 MIM:608870
neXtProt:NX_Q6UXM1 PharmGKB:PA134864136 InParanoid:Q6UXM1
OMA:SHHQFVT OrthoDB:EOG4K6G3K PhylomeDB:Q6UXM1 GenomeRNAi:121227
NextBio:80680 ArrayExpress:Q6UXM1 Bgee:Q6UXM1 CleanEx:HS_LRIG3
Genevestigator:Q6UXM1 GermOnline:ENSG00000139263 Uniprot:Q6UXM1
Length = 1119
Score = 224 (83.9 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 77/278 (27%), Positives = 132/278 (47%)
Query: 81 LYAISESLRGLEP---DERVS---LLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNIS 134
LY S + +EP D + +L + ++ +P K + L L ++ ++KN+
Sbjct: 172 LYLNSNRVTSMEPGYFDNLANTLLVLKLNRNRISAIPPKMFKLPQLQHLELNRNKIKNVD 231
Query: 135 DGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSL 194
F GL + L++L + N ++ + A L+ N++ L L HN L ++ GL L
Sbjct: 232 GLTFQGLGA-LKSLKMQRNGVTKLMDGAFWGLS-NMEILQLDHNNLTEITKGWLYGLLML 289
Query: 195 NFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAG 254
L LS N + +S D L L L N L+ ++ GL + L + +N ++
Sbjct: 290 QELHLSQNAINRISPDAWEFCQKLSELDLTFNHLSRLDDSSFLGLSLLNTLHIGNNRVSY 349
Query: 255 PLGPSTVPRLSSLKVLSIAHNQFS-SVR--RGALAGLDKLTSLSCHHNQIDVLEDHSFRA 311
+ LSSLK L + +N+ S ++ GA +GLDKL L N+I + +F
Sbjct: 350 -IADCAFRGLSSLKTLDLKNNEISWTIEDMNGAFSGLDKLRRLILQGNRIRSITKKAFTG 408
Query: 312 LSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFL 349
L L HLDL+ N I+++ G + + + L L L+ + L
Sbjct: 409 LDALEHLDLSDNAIMSLQGNAFSQMKKLQQLHLNTSSL 446
Score = 222 (83.2 bits), Expect = 5.7e-16, Sum P(2) = 5.7e-16
Identities = 84/312 (26%), Positives = 144/312 (46%)
Query: 86 ESLRGLEP-DERVSLLDCTLSNVT-VLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSS 143
E++ L P ++LL + + +LP E +L L +SS + + AF L
Sbjct: 111 ETIPNLGPVSANITLLSLAGNRIVEILPEHLKEFQSLETLDLSSNNISELQT-AFPALQ- 168
Query: 144 PLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNK 203
L+ L L +N ++ + LA L L L+ N++ + FK L L L+L+ NK
Sbjct: 169 -LKYLYLNSNRVTSMEPGYFDNLANTLLVLKLNRNRISAIPPKMFK-LPQLQHLELNRNK 226
Query: 204 LMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPR 263
+ + L L+ L++Q N +T + A GL ++ L L HN L + +
Sbjct: 227 IKNVDGLTFQGLGALKSLKMQRNGVTKLMDGAFWGLSNMEILQLDHNNLT-EITKGWLYG 285
Query: 264 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 323
L L+ L ++ N + + A KL+ L N + L+D SF LS L+ L + +N
Sbjct: 286 LLMLQELHLSQNAINRISPDAWEFCQKLSELDLTFNHLSRLDDSSFLGLSLLNTLHIGNN 345
Query: 324 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELR---LDDNDISMEPECI 380
R+ ++ + LS+L TLDL +N + +D+ L +LR L N I +
Sbjct: 346 RVSYIADCAFRGLSSLKTLDLKNNEISWTIEDMNGAFSGLDKLRRLILQGNRIRSITKKA 405
Query: 381 YVGFNTMD-LEL 391
+ G + ++ L+L
Sbjct: 406 FTGLDALEHLDL 417
Score = 216 (81.1 bits), Expect = 7.6e-14, P = 7.6e-14
Identities = 87/295 (29%), Positives = 138/295 (46%)
Query: 84 ISESLRGLEPDERVSLLDCTLSNVTVL-PGKFLE-GVTLHGLVISSGELKNISDGAFIGL 141
ISE L+ P ++ L + VT + PG F TL L ++ + I F
Sbjct: 157 ISE-LQTAFPALQLKYLYLNSNRVTSMEPGYFDNLANTLLVLKLNRNRISAIPPKMF--K 213
Query: 142 SSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSY 201
LQ L L N + V L L L + N + KL + +F GLS++ L L +
Sbjct: 214 LPQLQHLELNRNKIKNVDGLTFQGLGA-LKSLKMQRNGVTKLMDGAFWGLSNMEILQLDH 272
Query: 202 NKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTV 261
N L +++ L L+ L+ L L N + A + + +++LDL+ N L+ L S+
Sbjct: 273 NNLTEITKGWLYGLLMLQELHLSQNAINRISPDAWEFCQKLSELDLTFNHLSR-LDDSSF 331
Query: 262 PRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID-VLEDHS--FRALSTLSHL 318
LS L L I +N+ S + A GL L +L +N+I +ED + F L L L
Sbjct: 332 LGLSLLNTLHIGNNRVSYIADCAFRGLSSLKTLDLKNNEISWTIEDMNGAFSGLDKLRRL 391
Query: 319 DLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 373
L NRI +++ + L L LDLS N + +L + + +K LQ+L L+ + +
Sbjct: 392 ILQGNRIRSITKKAFTGLDALEHLDLSDNAIMSLQGNAFSQMKKLQQLHLNTSSL 446
Score = 204 (76.9 bits), Expect = 9.7e-15, Sum P(2) = 9.7e-15
Identities = 66/212 (31%), Positives = 108/212 (50%)
Query: 165 PLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPL-VTLRVLRL 223
PL + RLDLSHN+L ++ +S L SL + L+ N+L T+ L P+ + +L L
Sbjct: 71 PLPSWVARLDLSHNRLSFIKASSMSHLQSLREVKLNNNELETIPN--LGPVSANITLLSL 128
Query: 224 QGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRG 283
GNR+ + L+ +S+ LDLS N ++ L + P L LK L + N+ +S+ G
Sbjct: 129 AGNRIVEILPEHLKEFQSLETLDLSSNNIS-EL-QTAFPALQ-LKYLYLNSNRVTSMEPG 185
Query: 284 ALAGL-DKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTL 342
L + L L + N+I + F+ L L HL+L N+I V G + L L +L
Sbjct: 186 YFDNLANTLLVLKLNRNRISAIPPKMFK-LPQLQHLELNRNKIKNVDGLTFQGLGALKSL 244
Query: 343 DLSHNFLRALTQDLITPLKSLQELRLDDNDIS 374
+ N + L L +++ L+LD N+++
Sbjct: 245 KMQRNGVTKLMDGAFWGLSNMEILQLDHNNLT 276
Score = 71 (30.1 bits), Expect = 9.7e-15, Sum P(2) = 9.7e-15
Identities = 19/52 (36%), Positives = 30/52 (57%)
Query: 644 LSSLKVLSIAHNQFS-SVR--RGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
LSSLK L + +N+ S ++ GA +GLDKL L N+I + +F+ +
Sbjct: 358 LSSLKTLDLKNNEISWTIEDMNGAFSGLDKLRRLILQGNRIRSITKKAFTGL 409
Score = 64 (27.6 bits), Expect = 5.7e-16, Sum P(2) = 5.7e-16
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L+ L + N+ S+ + A GLD L L N I L+ ++FS +
Sbjct: 385 LDKLRRLILQGNRIRSITKKAFTGLDALEHLDLSDNAIMSLQGNAFSQM 433
Score = 62 (26.9 bits), Expect = 8.3e-14, Sum P(2) = 8.3e-14
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID 682
LS++++L + HN + + +G L GL L L N I+
Sbjct: 262 LSNMEILQLDHNNLTEITKGWLYGLLMLQELHLSQNAIN 300
Score = 60 (26.2 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 18/53 (33%), Positives = 28/53 (52%)
Query: 636 KLQATTIL-LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID-VLED 686
+L ++ L LS L L I +N+ S + A GL L +L +N+I +ED
Sbjct: 325 RLDDSSFLGLSLLNTLHIGNNRVSYIADCAFRGLSSLKTLDLKNNEISWTIED 377
Score = 47 (21.6 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 13/46 (28%), Positives = 21/46 (45%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
L L+ L ++ N + + A KL+ L N + L+D SF
Sbjct: 286 LLMLQELHLSQNAINRISPDAWEFCQKLSELDLTFNHLSRLDDSSF 331
>RGD|1585921 [details] [associations]
symbol:LRRTM1 "leucine rich repeat transmembrane neuronal 1"
species:10116 "Rattus norvegicus" [GO:0005783 "endoplasmic
reticulum" evidence=IEA;ISO] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007610 "behavior" evidence=IEA;ISO] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030424 "axon" evidence=IEA;ISO] [GO:0030426
"growth cone" evidence=IEA;ISO] [GO:0035418 "protein localization
to synapse" evidence=IEA;ISO] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0050808 "synapse organization" evidence=ISO;IDA]
[GO:0060076 "excitatory synapse" evidence=IDA] [GO:0009986 "cell
surface" evidence=ISO] InterPro:IPR001611 PROSITE:PS51450
RGD:1585921 GO:GO:0005783 GO:GO:0016021 GO:GO:0005886 GO:GO:0007610
GO:GO:0030054 GO:GO:0045211 GO:GO:0030424 InterPro:IPR003591
SMART:SM00369 GO:GO:0050808 GO:GO:0030426 InterPro:IPR000372
SMART:SM00013 GO:GO:0060076 GO:GO:0035418 EMBL:CH473957
GeneTree:ENSGT00700000104056 CTD:347730 KO:K16665 OrthoDB:EOG4FN4HG
OMA:EPDLFHG IPI:IPI00364927 RefSeq:NP_001102844.1 UniGene:Rn.171424
PRIDE:D4A6D8 Ensembl:ENSRNOT00000007993 GeneID:679668
KEGG:rno:679668 UCSC:RGD:1585921 NextBio:716984 Uniprot:D4A6D8
Length = 523
Score = 230 (86.0 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 82/273 (30%), Positives = 119/273 (43%)
Query: 99 LLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVV 158
LL C N+T P L G L GL + L + G F GL L L L +N + V
Sbjct: 49 LLYCEALNLTEAPHN-LSG--LLGLSLRYNSLSELRAGQFTGLMQ-LTWLYLDHNHICSV 104
Query: 159 PTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTL 218
A L + L LS NQ+ +L NT+F+ + +L +DLSYNKL L+ D L L
Sbjct: 105 QGDAFQKLR-RVKELTLSSNQITELANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKL 163
Query: 219 RVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFS 278
L ++ N + V Q RS+ LD+ +N L L ++ L L L + HN
Sbjct: 164 TTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKS-LARNSFAGLFKLTELHLEHNDLI 222
Query: 279 SVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSN 338
V L L SL N++ ++ S + L +DL+ N I + +
Sbjct: 223 KVNFAHFPRLISLNSLCLRRNKVAIVVS-SLDWVWNLEKMDLSGNEIEYMEPHVFETVPY 281
Query: 339 LTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
L +L L N L + ++ KSL + L N
Sbjct: 282 LQSLQLDSNRLTYIEPRILNSWKSLTSITLAGN 314
Score = 169 (64.5 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 68/233 (29%), Positives = 106/233 (45%)
Query: 191 LSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHN 250
LS L L L YN L L L+ L L L N + A Q LR V +L LS N
Sbjct: 64 LSGLLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSN 123
Query: 251 LLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFR 310
+ L +T + +L+ + +++N+ ++ GL KLT+L N I + F+
Sbjct: 124 QIT-ELANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQ 182
Query: 311 ALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDD 370
+L LD+ +N++ +++ S A L LT L L HN L + L SL L L
Sbjct: 183 DCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLIKVNFAHFPRLISLNSLCLRR 242
Query: 371 NDISMEPECI-YV-GFNTMDL---ELIYSGVWRHSTLLIPVMLSLCTRSSVVT 418
N +++ + +V MDL E+ Y + H +P + SL S+ +T
Sbjct: 243 NKVAIVVSSLDWVWNLEKMDLSGNEIEY--MEPHVFETVPYLQSLQLDSNRLT 293
>UNIPROTKB|F1NG27 [details] [associations]
symbol:TLR3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0002756 "MyD88-independent toll-like receptor signaling
pathway" evidence=IEA] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0004888 "transmembrane signaling receptor
activity" evidence=IEA] [GO:0034138 "toll-like receptor 3 signaling
pathway" evidence=IEA] [GO:0045087 "innate immune response"
evidence=IEA] [GO:0050729 "positive regulation of inflammatory
response" evidence=IEA] [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007252 "I-kappaB
phosphorylation" evidence=IEA] [GO:0032722 "positive regulation of
chemokine production" evidence=IEA] [GO:0032728 "positive
regulation of interferon-beta production" evidence=IEA] [GO:0032735
"positive regulation of interleukin-12 production" evidence=IEA]
[GO:0032755 "positive regulation of interleukin-6 production"
evidence=IEA] [GO:0032757 "positive regulation of interleukin-8
production" evidence=IEA] [GO:0032760 "positive regulation of tumor
necrosis factor production" evidence=IEA] [GO:0034123 "positive
regulation of toll-like receptor signaling pathway" evidence=IEA]
[GO:0034346 "positive regulation of type III interferon production"
evidence=IEA] [GO:0042346 "positive regulation of NF-kappaB import
into nucleus" evidence=IEA] [GO:0043123 "positive regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA] [GO:0043330
"response to exogenous dsRNA" evidence=IEA] [GO:0045078 "positive
regulation of interferon-gamma biosynthetic process" evidence=IEA]
[GO:0045080 "positive regulation of chemokine biosynthetic process"
evidence=IEA] [GO:0045356 "positive regulation of interferon-alpha
biosynthetic process" evidence=IEA] [GO:0045359 "positive
regulation of interferon-beta biosynthetic process" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0046330 "positive
regulation of JNK cascade" evidence=IEA] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=IEA] [GO:0071260 "cellular response to mechanical
stimulus" evidence=IEA] InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 GO:GO:0016021 GO:GO:0005737 GO:GO:0006952
GO:GO:0043123 GO:GO:0046330 GO:GO:0045944 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0032722
GO:GO:0032755 GO:GO:0051092 GO:GO:0032757 GO:GO:0071260
InterPro:IPR000372 SMART:SM00013 GO:GO:0032760 GO:GO:0043330
GO:GO:0032735 GO:GO:0042346 GO:GO:0045078 GO:GO:0032728
GO:GO:0007252 GO:GO:0045080 SUPFAM:SSF52200 GO:GO:0045359
GeneTree:ENSGT00680000099674 GO:GO:0034123 PANTHER:PTHR24365:SF5
GO:GO:0045356 GO:GO:0034346 OMA:LNLGYNI EMBL:AADN02031435
IPI:IPI00590386 Ensembl:ENSGALT00000021952 Uniprot:F1NG27
Length = 900
Score = 234 (87.4 bits), Expect = 6.1e-16, P = 6.1e-16
Identities = 78/265 (29%), Positives = 131/265 (49%)
Query: 130 LKNISDGAFIGLS-SPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQL-YKLENTS 187
L+ I++ F+ L+ S LQ L L +S V + A + L L LDL N++ +L
Sbjct: 388 LQRITNKTFVSLANSRLQVLNLTKTRISTVESEAFSSLG-QLKILDLGLNEINQELTGHE 446
Query: 188 FKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQ--G-NRLTVSVVAALQGLRSVTD 244
F+GL+++ ++ LSYNK +TL + + +LR L L+ G N L +S + LR++T
Sbjct: 447 FEGLNNIEYIYLSYNKNVTLRSESFIFVPSLRKLMLRKVGCNNLAISP-SPFHPLRNLTV 505
Query: 245 LDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAG--------LDKLTSLSC 296
LD+S+N +A + L L +L++ HN + + + A G + L L+
Sbjct: 506 LDISNNNIAN-IREDLFNGLHELDILNLQHNNLARLWKCANPGGPVLFLKDVPNLHILNL 564
Query: 297 HHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDL 356
N D + H F+ L L LDL N + + ++L TL+L N + ++ +++
Sbjct: 565 KSNGFDEIPVHVFKGLHQLKDLDLGSNNLNLLPATLFDDQTSLNTLNLQKNLITSVEENV 624
Query: 357 ITP-LKSLQELRLDDNDISMEPECI 380
P KSL+ L +D N E I
Sbjct: 625 FGPAFKSLRTLEMDFNPFDCTCESI 649
Score = 217 (81.4 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 115/411 (27%), Positives = 183/411 (44%)
Query: 59 IKNDLCACDLPHTLRCTANKSDL------YAISES-LRGLEPD---ERVSL--LDCTLSN 106
I+N + C H L+ T SDL IS + L+ L+P+ E +L L+ +
Sbjct: 35 IRNTMADCS--H-LKLTQIPSDLPKNITGLDISHNQLKKLDPENLTEYSNLIYLNAGYNI 91
Query: 107 VTVL-PGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAP 165
++ L PG L L + +L + DG F S+ L L L N++ V
Sbjct: 92 ISKLKPGLCKNLPLLQILKLEHNQLHELPDGVFASCSN-LTELNLGYNIIEV-KNDPFKT 149
Query: 166 LAPNLDRLDLSHNQLYKLENTSFKG-LSSLNFLDLSYNKLMTLSQDCLAPL--VTLRVLR 222
L NL+ LDLSHN L K N + L +L L L N++ L+++ L L +L L
Sbjct: 150 LE-NLNILDLSHNHL-KSANLGLQQQLKNLRELVLYSNQITELNKEDLKFLSNTSLNSLD 207
Query: 223 LQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKV--LSIAHNQFSSV 280
L N L L + ++ L L++ L LS + LS++H + S +
Sbjct: 208 LSSNPLKEFHTGCLHAIGNLFGLILNNVELGENRTKKLCTELSDTAIQNLSLSHVKLSHI 267
Query: 281 RRGALAGLD--KLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSN 338
R L GL LT L+ N + V+ED SF+ LS L +L+L N I+ VS LS+
Sbjct: 268 NRLTLQGLQGTNLTVLNLSKNSLSVIEDDSFQWLSKLEYLNLEDNNIINVSSHLFYGLSS 327
Query: 339 LTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELIYSGVWR 398
+T L+L ++ + L L+ L +D+N+ ++ G + +Y+
Sbjct: 328 ITHLNLINSLTGKIEDFSFQWLHHLEYLIMDNNNFPRITTNMFTGLKNLKYLSLYNCNTN 387
Query: 399 HSTLLIPVMLSLC-TRSSVV--TRYRYCVVLIEGSNILDQSALV-LGCSEI 445
+ +SL +R V+ T+ R V E + L Q ++ LG +EI
Sbjct: 388 LQRITNKTFVSLANSRLQVLNLTKTRISTVESEAFSSLGQLKILDLGLNEI 438
Score = 198 (74.8 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 83/304 (27%), Positives = 139/304 (45%)
Query: 160 TSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLR 219
T + L N+ LD+SHNQL KL+ + S+L +L+ YN + L L L+
Sbjct: 48 TQIPSDLPKNITGLDISHNQLKKLDPENLTEYSNLIYLNAGYNIISKLKPGLCKNLPLLQ 107
Query: 220 VLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSS 279
+L+L+ N+L ++T+L+L +N++ P L +L +L ++HN S
Sbjct: 108 ILKLEHNQLHELPDGVFASCSNLTELNLGYNIIEVKNDPFKT--LENLNILDLSHNHLKS 165
Query: 280 VRRGALAGLDKLTSLSCHHNQIDVL--EDHSFRALSTLSHLDLAHNRIVAVSGASLAHLS 337
G L L L + NQI L ED F + ++L+ LDL+ N + L +
Sbjct: 166 ANLGLQQQLKNLRELVLYSNQITELNKEDLKFLSNTSLNSLDLSSNPLKEFHTGCLHAIG 225
Query: 338 NLTTLDLSHNFL-RALTQDLITPLK--SLQELRLDDNDISMEPECIYVGFNTMDLELIYS 394
NL L L++ L T+ L T L ++Q L L +S G +L ++
Sbjct: 226 NLFGLILNNVELGENRTKKLCTELSDTAIQNLSLSHVKLSHINRLTLQGLQGTNLTVL-- 283
Query: 395 GVWRHSTLLIPVMLSLCTRSSVVTRYRYCVVLIEGSNILDQSA-LVLGCSEI--LALVPT 451
+ ++S LS+ S + + +E +NI++ S+ L G S I L L+ +
Sbjct: 284 NLSKNS-------LSVIEDDSFQWLSKLEYLNLEDNNIINVSSHLFYGLSSITHLNLINS 336
Query: 452 LTSQ 455
LT +
Sbjct: 337 LTGK 340
Score = 188 (71.2 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 79/299 (26%), Positives = 137/299 (45%)
Query: 95 ERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLP-NN 153
+ +SL LS++ L + L+G L L +S L I D +F LS L+ L L NN
Sbjct: 255 QNLSLSHVKLSHINRLTLQGLQGTNLTVLNLSKNSLSVIEDDSFQWLSK-LEYLNLEDNN 313
Query: 154 LLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLA 213
+++V +S L ++ L+L ++ K+E+ SF+ L L +L + N ++ +
Sbjct: 314 IINV--SSHLFYGLSSITHLNLINSLTGKIEDFSFQWLHHLEYLIMDNNNFPRITTNMFT 371
Query: 214 PLVTLRVLRLQG-----NRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLK 268
L L+ L L R+T +L R + L+L+ ++ + L LK
Sbjct: 372 GLKNLKYLSLYNCNTNLQRITNKTFVSLANSR-LQVLNLTKTRIS-TVESEAFSSLGQLK 429
Query: 269 VLSIAHNQFSSVRRG-ALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH---NR 324
+L + N+ + G GL+ + + +N+ L SF + +L L L N
Sbjct: 430 ILDLGLNEINQELTGHEFEGLNNIEYIYLSYNKNVTLRSESFIFVPSLRKLMLRKVGCNN 489
Query: 325 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVG 383
+ A+S + L NLT LD+S+N + + +DL L L L L N+++ +C G
Sbjct: 490 L-AISPSPFHPLRNLTVLDISNNNIANIREDLFNGLHELDILNLQHNNLARLWKCANPG 547
Score = 182 (69.1 bits), Expect = 7.1e-12, Sum P(2) = 7.1e-12
Identities = 76/286 (26%), Positives = 135/286 (47%)
Query: 115 LEGVTLHGLVISSGELKNISDGAFIGLSSP-LQALGLPNNLLSVVPTSALAPLAPNLDRL 173
L + L +S +L +I+ GL L L L N LSV+ + L+ L+ L
Sbjct: 249 LSDTAIQNLSLSHVKLSHINRLTLQGLQGTNLTVLNLSKNSLSVIEDDSFQWLS-KLEYL 307
Query: 174 DLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQD-CLAPLVTLRVLRLQGN---RLT 229
+L N + + + F GLSS+ L+L N L +D L L L + N R+T
Sbjct: 308 NLEDNNIINVSSHLFYGLSSITHLNL-INSLTGKIEDFSFQWLHHLEYLIMDNNNFPRIT 366
Query: 230 VSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRL--SSLKVLSIAHNQFSSVRRGALAG 287
++ L+ L+ ++ + + NL + T L S L+VL++ + S+V A +
Sbjct: 367 TNMFTGLKNLKYLSLYNCNTNLQR--ITNKTFVSLANSRLQVLNLTKTRISTVESEAFSS 424
Query: 288 LDKLTSLSCHHNQIDV-LEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSH 346
L +L L N+I+ L H F L+ + ++ L++N+ V + S + +L L L
Sbjct: 425 LGQLKILDLGLNEINQELTGHEFEGLNNIEYIYLSYNKNVTLRSESFIFVPSLRKLMLRK 484
Query: 347 ---NFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDL 389
N L A++ PL++L L + +N+I+ E ++ G + +D+
Sbjct: 485 VGCNNL-AISPSPFHPLRNLTVLDISNNNIANIREDLFNGLHELDI 529
Score = 64 (27.6 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
L +L VL I++N +++R GL +L L+ HN +
Sbjct: 500 LRNLTVLDISNNNIANIREDLFNGLHELDILNLQHNNL 537
Score = 56 (24.8 bits), Expect = 8.7e-13, Sum P(2) = 8.7e-13
Identities = 18/68 (26%), Positives = 31/68 (45%)
Query: 626 NRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDV-L 684
N N + R ++ S L+VL++ + S+V A + L +L L N+I+ L
Sbjct: 383 NCNTNLQRITNKTFVSLANSRLQVLNLTKTRISTVESEAFSSLGQLKILDLGLNEINQEL 442
Query: 685 EDHSFSNV 692
H F +
Sbjct: 443 TGHEFEGL 450
Score = 38 (18.4 bits), Expect = 6.4e-11, Sum P(2) = 6.4e-11
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHH 678
L L+ L + +N F + GL L LS ++
Sbjct: 349 LHHLEYLIMDNNNFPRITTNMFTGLKNLKYLSLYN 383
>UNIPROTKB|F1P9F0 [details] [associations]
symbol:LGR4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021
InterPro:IPR003591 SMART:SM00369 GO:GO:0016500
GeneTree:ENSGT00650000092962 OMA:DGYWSDC EMBL:AAEX03013024
Ensembl:ENSCAFT00000016178 Uniprot:F1P9F0
Length = 905
Score = 218 (81.8 bits), Expect = 6.8e-16, Sum P(2) = 6.8e-16
Identities = 75/246 (30%), Positives = 115/246 (46%)
Query: 98 SLLDCTLSNVTVLP-GKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLS 156
+L D +++N+T LP F L L ++ +L I A GL L+ L L NN L
Sbjct: 14 ALRDISMNNITQLPEDAFKNFPFLEELRLAGNDLSFIHPKALSGLKE-LKVLTLQNNQLK 72
Query: 157 VVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLV 216
VP+ A+ L+ L L L N + + SF+GL+ L L L N LM + L+ L
Sbjct: 73 TVPSEAIRGLSA-LQSLRLDANHITSVPEDSFEGLAQLRHLWLDDNSLMEVPVHPLSNLP 131
Query: 217 TLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQ 276
TL+ L L N+++ A L S+ L L +N + LG L +L+ L + +N
Sbjct: 132 TLQALTLALNKISSIPDYAFTNLSSLVVLHLHNNKIKN-LGQHCFDGLDNLETLDLNYNN 190
Query: 277 FSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHL 336
+ A+ L L L H N I V+ D +F L + L N + V ++ +L
Sbjct: 191 LGEFPQ-AIKALPSLKELLFHSNSISVIPDGAFDGNPLLRTIHLYDNPLSFVGNSAFHNL 249
Query: 337 SNLTTL 342
S+L +L
Sbjct: 250 SDLHSL 255
Score = 206 (77.6 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 78/262 (29%), Positives = 117/262 (44%)
Query: 137 AFIGLSSPLQAL-GLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLN 195
A I L+S L AL + N ++ +P A P L+ L L+ N L + + GL L
Sbjct: 5 AVITLNS-LPALRDISMNNITQLPEDAFKNF-PFLEELRLAGNDLSFIHPKALSGLKELK 62
Query: 196 FLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHN-LLAG 254
L L N+L T+ + + L L+ LRL N +T + +GL + L L N L+
Sbjct: 63 VLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLAQLRHLWLDDNSLMEV 122
Query: 255 PLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALST 314
P+ P + L +L+ L++A N+ SS+ A L L L H+N+I L H F L
Sbjct: 123 PVHP--LSNLPTLQALTLALNKISSIPDYAFTNLSSLVVLHLHNNKIKNLGQHCFDGLDN 180
Query: 315 LSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 374
L LDL +N + A A L +L L N + + L+ + L DN +S
Sbjct: 181 LETLDLNYNNLGEFPQAIKA-LPSLKELLFHSNSISVIPDGAFDGNPLLRTIHLYDNPLS 239
Query: 375 MEPECIYVGFNTMDLE-LIYSG 395
+ N DL L+ G
Sbjct: 240 FVGNSAF--HNLSDLHSLVIRG 259
Score = 178 (67.7 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 88/324 (27%), Positives = 135/324 (41%)
Query: 71 TLRCTANKSDLYAISE-SLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGE 129
+LR AN + ++ E S GL + L D +L V V P L TL L ++ +
Sbjct: 87 SLRLDANH--ITSVPEDSFEGLAQLRHLWLDDNSLMEVPVHPLSNLP--TLQALTLALNK 142
Query: 130 LKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFK 189
+ +I D AF LSS L L L NN + + L NL+ LDL++N L + + K
Sbjct: 143 ISSIPDYAFTNLSS-LVVLHLHNNKIKNLGQHCFDGL-DNLETLDLNYNNLGEFPQ-AIK 199
Query: 190 GLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSH 249
L SL L N + + LR + L N L+ +A L +DL H
Sbjct: 200 ALPSLKELLFHSNSISVIPDGAFDGNPLLRTIHLYDNPLSFVGNSAFHNL---SDL---H 253
Query: 250 NL-LAGPLGPSTVPRLSS---LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLE 305
+L + G P L+ L+ L++ + SS+ L +L +N I L
Sbjct: 254 SLVIRGASMVQQFPNLTGTVHLESLTLTGTKISSISSNLCQEQKMLRTLDLSYNSIKDLP 313
Query: 306 DHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQE 365
SF L + L N+I + + L +L LDLS N + + L S+
Sbjct: 314 --SFDGCHALEEISLQRNQIHQIKEGTFQGLVSLRILDLSRNQIHEIHNRAFAKLGSITN 371
Query: 366 LRLDDNDISMEPECIYVGFNTMDL 389
L + N+++ P G N + L
Sbjct: 372 LDISFNELTSFPTEGLSGLNQLKL 395
Score = 174 (66.3 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 69/275 (25%), Positives = 124/275 (45%)
Query: 100 LDCTLSNVTVLPG-KFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVV 158
L L+ ++ +P F +L L + + ++KN+ F GL + L+ L L N L
Sbjct: 136 LTLALNKISSIPDYAFTNLSSLVVLHLHNNKIKNLGQHCFDGLDN-LETLDLNYNNLGEF 194
Query: 159 PTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTL 218
P A+ L P+L L N + + + +F G L + L N L + L L
Sbjct: 195 P-QAIKAL-PSLKELLFHSNSISVIPDGAFDGNPLLRTIHLYDNPLSFVGNSAFHNLSDL 252
Query: 219 RVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFS 278
L ++G + V L G + L L+ ++ + + L+ L +++N
Sbjct: 253 HSLVIRGASM-VQQFPNLTGTVHLESLTLTGTKISS-ISSNLCQEQKMLRTLDLSYNSIK 310
Query: 279 SVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSN 338
+ + G L +S NQI +++ +F+ L +L LDL+ N+I + + A L +
Sbjct: 311 DLP--SFDGCHALEEISLQRNQIHQIKEGTFQGLVSLRILDLSRNQIHEIHNRAFAKLGS 368
Query: 339 LTTLDLSHNFLRAL-TQDL--ITPLKSLQELRLDD 370
+T LD+S N L + T+ L + LK + L+L +
Sbjct: 369 ITNLDISFNELTSFPTEGLSGLNQLKLVGNLKLKE 403
Score = 167 (63.8 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 88/343 (25%), Positives = 150/343 (43%)
Query: 215 LVTLRVLR-LQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIA 273
L +L LR + N +T A + + +L L+ N L+ + P + L LKVL++
Sbjct: 9 LNSLPALRDISMNNITQLPEDAFKNFPFLEELRLAGNDLSF-IHPKALSGLKELKVLTLQ 67
Query: 274 HNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASL 333
+NQ +V A+ GL L SL N I + + SF L+ L HL L N ++ V L
Sbjct: 68 NNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLAQLRHLWLDDNSLMEVPVHPL 127
Query: 334 AHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMD-LELI 392
++L L L L+ N + ++ T L SL L L +N I + + G + ++ L+L
Sbjct: 128 SNLPTLQALTLALNKISSIPDYAFTNLSSLVVLHLHNNKIKNLGQHCFDGLDNLETLDLN 187
Query: 393 YS--GVWRHSTLLIPVMLSLCTRSSVVTRYRYCVVLIEGSNILDQSALVLGCSEILALVP 450
Y+ G + + +P + L S+ ++ V+ +G+ D + L L +
Sbjct: 188 YNNLGEFPQAIKALPSLKELLFHSNSIS------VIPDGA--FDGNPL-------LRTIH 232
Query: 451 TLTSQPLSYV-TSLRANVTGLGTVQVYVQLWTNYDPNCLLTI---TLYIDGDVIVQKNTN 506
L PLS+V S N++ L ++ + PN T+ +L + G I ++N
Sbjct: 233 -LYDNPLSFVGNSAFHNLSDLHSLVIRGASMVQQFPNLTGTVHLESLTLTGTKISSISSN 291
Query: 507 CSRPWVSLKQLPWS-------PKYQVCATLGEFPTDKPLLHCI 542
+ L+ L S P + C L E + +H I
Sbjct: 292 LCQEQKMLRTLDLSYNSIKDLPSFDGCHALEEISLQRNQIHQI 334
Score = 65 (27.9 bits), Expect = 6.8e-16, Sum P(2) = 6.8e-16
Identities = 13/47 (27%), Positives = 24/47 (51%)
Query: 646 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
+L+ +S+ NQ ++ G GL L L NQI + + +F+ +
Sbjct: 320 ALEEISLQRNQIHQIKEGTFQGLVSLRILDLSRNQIHEIHNRAFAKL 366
Score = 63 (27.2 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 15/59 (25%), Positives = 30/59 (50%)
Query: 623 DDINRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
++I+ + +K + T L SL++L ++ NQ + A A L +T+L N++
Sbjct: 322 EEISLQRNQIHQIK-EGTFQGLVSLRILDLSRNQIHEIHNRAFAKLGSITNLDISFNEL 379
Score = 45 (20.9 bits), Expect = 8.1e-14, Sum P(2) = 8.1e-14
Identities = 10/47 (21%), Positives = 23/47 (48%)
Query: 647 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNVI 693
L+ L +++N + + G L +S NQI +++ +F ++
Sbjct: 299 LRTLDLSYNSIKDLP--SFDGCHALEEISLQRNQIHQIKEGTFQGLV 343
Score = 43 (20.2 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 14/48 (29%), Positives = 25/48 (52%)
Query: 624 DINRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKL 671
D++RN + + A L S+ L I+ N+ +S L+GL++L
Sbjct: 349 DLSRNQIHEIHNRAFAK---LGSITNLDISFNELTSFPTEGLSGLNQL 393
Score = 37 (18.1 bits), Expect = 5.5e-13, Sum P(2) = 5.5e-13
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 503 KNTNCSRPWVSLKQLPWSPKYQVCATLG 530
K ++ +V+L+ L YQ CA G
Sbjct: 402 KEALAAKDFVNLRSLSVPYAYQCCAFWG 429
>WB|WBGene00006593 [details] [associations]
symbol:tol-1 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0007166 "cell
surface receptor signaling pathway" evidence=TAS] [GO:0009790
"embryo development" evidence=IMP] [GO:0006952 "defense response"
evidence=IMP] [GO:0005623 "cell" evidence=IDA] [GO:0030424 "axon"
evidence=ND] [GO:0005057 "receptor signaling protein activity"
evidence=ISS] InterPro:IPR000157 InterPro:IPR001611 Pfam:PF01582
PROSITE:PS50104 PROSITE:PS51450 GO:GO:0009792 GO:GO:0040007
GO:GO:0006952 GO:GO:0002119 GO:GO:0010171 GO:GO:0005622
GO:GO:0005623 GO:GO:0007166 GO:GO:0005057
GeneTree:ENSGT00700000104286 SUPFAM:SSF52200 HSSP:O60603
EMBL:FO080418 RefSeq:NP_001020983.1 ProteinModelPortal:Q9N5Z3
SMR:Q9N5Z3 DIP:DIP-24325N IntAct:Q9N5Z3 MINT:MINT-1108170
EnsemblMetazoa:C07F11.1 GeneID:171635 KEGG:cel:CELE_C07F11.1
UCSC:C07F11.1 CTD:171635 WormBase:C07F11.1 InParanoid:Q9N5Z3
OMA:NPYLVEI NextBio:872085 ArrayExpress:Q9N5Z3 Uniprot:Q9N5Z3
Length = 1221
Score = 227 (85.0 bits), Expect = 6.8e-16, Sum P(2) = 6.8e-16
Identities = 71/265 (26%), Positives = 124/265 (46%)
Query: 110 LPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSP-LQALGLPNNLLSVVPTSALAPLAP 168
+P E +L L +S E++ + F SSP L+ L N L +P L
Sbjct: 274 VPDAVAELASLVALNVSRNEIEAGNSSVF---SSPELEMLDASYNKLDSLPVEWLQKCEK 330
Query: 169 NLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRL 228
+ L L HN + +L ++L LDLS N+L + L + LRL N L
Sbjct: 331 RIAHLHLEHNSIEQLTGGVLANATNLQTLDLSSNQLRVFRDEVLPENSKIGNLRLSNNSL 390
Query: 229 TVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGL 288
+ ++L GL+ + LDLSHN L P+ + ++ LK + ++HN+ + V + L +
Sbjct: 391 ELLEPSSLSGLK-LESLDLSHNKLTEV--PAAIGKVEQLKKVDLSHNRIAKVYQYVLNKI 447
Query: 289 DKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNF 348
+L ++ +NQ+ + + F S L LD+++N I + + A L + + N
Sbjct: 448 KQLHTVDLSNNQLQSIGPYIFSDSSELHSLDVSNNEISLLFKDAFARCPKLRKISMKMNK 507
Query: 349 LRALTQDLITPLKSLQELRLDDNDI 373
+++L + L T L+ L + N+I
Sbjct: 508 IKSLDEGL-TEASGLRRLDVSHNEI 531
Score = 209 (78.6 bits), Expect = 6.1e-14, Sum P(2) = 6.1e-14
Identities = 84/313 (26%), Positives = 144/313 (46%)
Query: 65 ACDLPHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTV-LPGKFLEGVTLHGL 123
+C L +++ L I + LRG+ ++S+ +++ + + L FL+ +
Sbjct: 190 SCVAQQLLIVDLSRNRLTNIEQFLRGIPAIRQISVAYNSIAELDLSLATPFLQQL----- 244
Query: 124 VISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKL 183
E I D L + + L N L VP A+A LA +L L++S N++ +
Sbjct: 245 ---DAEANRIVD--LTSLPGTVVHVNLAGNALKRVP-DAVAELA-SLVALNVSRNEI-EA 296
Query: 184 ENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVT-LRVLRLQGNRLTVSVVAALQGLRSV 242
N+S L LD SYNKL +L + L + L L+ N + L ++
Sbjct: 297 GNSSVFSSPELEMLDASYNKLDSLPVEWLQKCEKRIAHLHLEHNSIEQLTGGVLANATNL 356
Query: 243 TDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID 302
LDLS N L +P S + L +++N + +L+GL KL SL HN++
Sbjct: 357 QTLDLSSNQLR-VFRDEVLPENSKIGNLRLSNNSLELLEPSSLSGL-KLESLDLSHNKLT 414
Query: 303 VLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKS 362
+ + + L +DL+HNRI V L + L T+DLS+N L+++ + +
Sbjct: 415 EVPA-AIGKVEQLKKVDLSHNRIAKVYQYVLNKIKQLHTVDLSNNQLQSIGPYIFSDSSE 473
Query: 363 LQELRLDDNDISM 375
L L + +N+IS+
Sbjct: 474 LHSLDVSNNEISL 486
Score = 208 (78.3 bits), Expect = 7.9e-14, Sum P(2) = 7.9e-14
Identities = 68/252 (26%), Positives = 122/252 (48%)
Query: 145 LQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKL 204
LQ L + +N L + +A L +DLS N+L +E +G+ ++ + ++YN +
Sbjct: 172 LQVLNISSNELPSLRREESC-VAQQLLIVDLSRNRLTNIEQF-LRGIPAIRQISVAYNSI 229
Query: 205 MTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRL 264
L P L+ L + NR+ + +L G +V ++L+ N L P V L
Sbjct: 230 AELDLSLATPF--LQQLDAEANRIVD--LTSLPG--TVVHVNLAGNALKRV--PDAVAEL 281
Query: 265 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLE-DHSFRALSTLSHLDLAHN 323
+SL L+++ N+ + + +L L +N++D L + + ++HL L HN
Sbjct: 282 ASLVALNVSRNEIEAGNSSVFSS-PELEMLDASYNKLDSLPVEWLQKCEKRIAHLHLEHN 340
Query: 324 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISM-EPECIYV 382
I ++G LA+ +NL TLDLS N LR +++ + LRL +N + + EP +
Sbjct: 341 SIEQLTGGVLANATNLQTLDLSSNQLRVFRDEVLPENSKIGNLRLSNNSLELLEPSSLS- 399
Query: 383 GFNTMDLELIYS 394
G L+L ++
Sbjct: 400 GLKLESLDLSHN 411
Score = 201 (75.8 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 70/290 (24%), Positives = 146/290 (50%)
Query: 91 LEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGL 150
L + ++ L + +++ +L L G+ L L +S +L + A IG L+ + L
Sbjct: 374 LPENSKIGNLRLSNNSLELLEPSSLSGLKLESLDLSHNKLTEVP--AAIGKVEQLKKVDL 431
Query: 151 PNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQD 210
+N ++ V L + L +DLS+NQL + F S L+ LD+S N++ L +D
Sbjct: 432 SHNRIAKVYQYVLNKIK-QLHTVDLSNNQLQSIGPYIFSDSSELHSLDVSNNEISLLFKD 490
Query: 211 CLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVL 270
A LR + ++ N++ S+ L + LD+SHN + L S +P +L++L
Sbjct: 491 AFARCPKLRKISMKMNKIK-SLDEGLTEASGLRRLDVSHNEIL-VLKWSALPE--NLEIL 546
Query: 271 SIAHNQFSSVRRGALA-GLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 329
+ +N + + +++ L S+S +N I ++ ++ + ++L LD+++NR+ +
Sbjct: 547 NADNNDINLLTAASMSPSTANLKSVSLSNNGITIM--NADQIPNSLESLDVSNNRLAKLG 604
Query: 330 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPEC 379
+LA S L L+L N L + + + ++++ L+++ ++ + +C
Sbjct: 605 KTALAAKSQLRRLNLKGNLLTVVATESMKVVEAVHPLKVEISENPLICDC 654
Score = 153 (58.9 bits), Expect = 6.5e-08, Sum P(2) = 6.5e-08
Identities = 67/291 (23%), Positives = 134/291 (46%)
Query: 120 LHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQ 179
LH + +S+ +L++I F SS L +L + NN +S++ A A P L ++ + N+
Sbjct: 450 LHTVDLSNNQLQSIGPYIFSD-SSELHSLDVSNNEISLLFKDAFAR-CPKLRKISMKMNK 507
Query: 180 LYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQ-G 238
+ L+ S L LD+S+N+++ L L L +L N + + A++
Sbjct: 508 IKSLDE-GLTEASGLRRLDVSHNEILVLKWSALPE--NLEILNADNNDINLLTAASMSPS 564
Query: 239 LRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHH 298
++ + LS+N + + +P +SL+ L +++N+ + + + ALA +L L+
Sbjct: 565 TANLKSVSLSNNGIT-IMNADQIP--NSLESLDVSNNRLAKLGKTALAAKSQLRRLNLKG 621
Query: 299 NQIDVLEDHSFRALSTLSHL--DLAHNRIVA-------VSGASLAHL-SNLTTLDLSHNF 348
N + V+ S + + + L +++ N ++ + GA L + T SH
Sbjct: 622 NLLTVVATESMKVVEAVHPLKVEISENPLICDCQMGWMIGGAKPKVLIQDSETASCSHAV 681
Query: 349 ------LRALTQ-DLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELI 392
+++L++ DL+ P KS+ EPECI + D + +
Sbjct: 682 DGHQIQIQSLSKKDLLCPYKSV-----------CEPECICCQYGNCDCKSV 721
Score = 135 (52.6 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 76/304 (25%), Positives = 138/304 (45%)
Query: 96 RVSLLDCTLSNVTVLPGKFLEGVT-LHGLVISSGELKNISDGAFIGLSSPLQALGLPNNL 154
R + C +N P + + +T LH L I E + S F L++ L+ L L
Sbjct: 72 RSLFISCDNNNFQ-FPDAYFKSLTALHHLRIVGCETTHFSVKLFEDLAA-LRRLELDQ-- 127
Query: 155 LSVVPTS------ALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLS 208
+S TS L PLA L++ L+ ++ +L L L L++S N+L +L
Sbjct: 128 ISTASTSFEMTEDVLMPLA-RLEKFSLTRSRNIELPQRLLCSLPHLQVLNISSNELPSLR 186
Query: 209 QD--CLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAG-PLGPST----- 260
++ C+A L ++ L NRLT ++ L+G+ ++ + +++N +A L +T
Sbjct: 187 REESCVAQ--QLLIVDLSRNRLT-NIEQFLRGIPAIRQISVAYNSIAELDLSLATPFLQQ 243
Query: 261 ----VPRLSSLKVL--SIAHNQFS--SVRR--GALAGLDKLTSLSCHHNQIDVLEDHSFR 310
R+ L L ++ H + +++R A+A L L +L+ N+I+ F
Sbjct: 244 LDAEANRIVDLTSLPGTVVHVNLAGNALKRVPDAVAELASLVALNVSRNEIEAGNSSVFS 303
Query: 311 ALSTLSHLDLAHNRIVAVSGASLAHLSN-LTTLDLSHNFLRALTQDLITPLKSLQELRLD 369
+ L LD ++N++ ++ L + L L HN + LT ++ +LQ L L
Sbjct: 304 S-PELEMLDASYNKLDSLPVEWLQKCEKRIAHLHLEHNSIEQLTGGVLANATNLQTLDLS 362
Query: 370 DNDI 373
N +
Sbjct: 363 SNQL 366
Score = 59 (25.8 bits), Expect = 6.8e-16, Sum P(2) = 6.8e-16
Identities = 15/54 (27%), Positives = 26/54 (48%)
Query: 630 SDSRYVKLQATTIL-LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID 682
SD+ + L L + L + N+FS++ RG L L L+ H+N ++
Sbjct: 816 SDNSLISLSGEEFLKCGEVSQLFLNGNRFSTLSRGIFEKLPNLKYLTLHNNSLE 869
Score = 57 (25.1 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 13/62 (20%), Positives = 33/62 (53%)
Query: 630 SDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
S ++ ++ A + LK + ++HN+ + V + L + +L ++ +NQ+ + + F
Sbjct: 409 SHNKLTEVPAAIGKVEQLKKVDLSHNRIAKVYQYVLNKIKQLHTVDLSNNQLQSIGPYIF 468
Query: 690 SN 691
S+
Sbjct: 469 SD 470
Score = 54 (24.1 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 13/48 (27%), Positives = 25/48 (52%)
Query: 645 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
++L+ L ++ NQ R L K+ +L +N +++LE S S +
Sbjct: 354 TNLQTLDLSSNQLRVFRDEVLPENSKIGNLRLSNNSLELLEPSSLSGL 401
Score = 53 (23.7 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 645 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLED 686
S L L +++N+ S + + A A KL +S N+I L++
Sbjct: 472 SELHSLDVSNNEISLLFKDAFARCPKLRKISMKMNKIKSLDE 513
Score = 51 (23.0 bits), Expect = 4.6e-15, Sum P(2) = 4.6e-15
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 645 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
+SL+ L +++N+ + + + ALA +L L+ N + V+ S V
Sbjct: 588 NSLESLDVSNNRLAKLGKTALAAKSQLRRLNLKGNLLTVVATESMKVV 635
Score = 50 (22.7 bits), Expect = 5.8e-15, Sum P(2) = 5.8e-15
Identities = 14/46 (30%), Positives = 25/46 (54%)
Query: 645 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFS 690
S L+ L ++HN+ ++ AL + L L+ +N I++L S S
Sbjct: 519 SGLRRLDVSHNEILVLKWSALP--ENLEILNADNNDINLLTAASMS 562
Score = 50 (22.7 bits), Expect = 6.8e-13, Sum P(2) = 6.8e-13
Identities = 15/62 (24%), Positives = 30/62 (48%)
Query: 630 SDSRYVKL-QATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHS 688
S +R K+ Q + L + +++NQ S+ + +L SL +N+I +L +
Sbjct: 432 SHNRIAKVYQYVLNKIKQLHTVDLSNNQLQSIGPYIFSDSSELHSLDVSNNEISLLFKDA 491
Query: 689 FS 690
F+
Sbjct: 492 FA 493
Score = 40 (19.1 bits), Expect = 6.4e-14, Sum P(2) = 6.4e-14
Identities = 11/57 (19%), Positives = 30/57 (52%)
Query: 625 INRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
+N +N+D + + + ++LK +S+++N + + + + L SL +N++
Sbjct: 546 LNADNNDINLLTAASMSPSTANLKSVSLSNNGITIMNADQIP--NSLESLDVSNNRL 600
>FB|FBgn0085397 [details] [associations]
symbol:Fili "Fish-lips" species:7227 "Drosophila
melanogaster" [GO:0003674 "molecular_function" evidence=ND]
[GO:0042981 "regulation of apoptotic process" evidence=IMP]
[GO:0016021 "integral to membrane" evidence=ISM] [GO:0007476
"imaginal disc-derived wing morphogenesis" evidence=IMP]
InterPro:IPR001611 PROSITE:PS51450 EMBL:AE013599 GO:GO:0016021
GO:GO:0042981 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
GO:GO:0007476 GeneTree:ENSGT00700000104286 EMBL:BT015985
RefSeq:NP_001097402.1 UniGene:Dm.32432 SMR:Q5U1A7 STRING:Q5U1A7
EnsemblMetazoa:FBtr0112593 EnsemblMetazoa:FBtr0330338
GeneID:5740472 KEGG:dme:Dmel_CG34368 UCSC:CG34368-RC CTD:5740472
FlyBase:FBgn0085397 InParanoid:Q5U1A7 OMA:KEADDEP OrthoDB:EOG4H9W1T
GenomeRNAi:5740472 NextBio:20891510 Uniprot:Q5U1A7
Length = 738
Score = 232 (86.7 bits), Expect = 7.3e-16, P = 7.3e-16
Identities = 71/228 (31%), Positives = 110/228 (48%)
Query: 145 LQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKL 204
L+ L L N++ + + L L+LS N + L +FKGL++L LDLS+N++
Sbjct: 98 LEILDLSQNIIETLGSKNFE-YQSELRTLNLSRNLVSSLHKHAFKGLTNLLLLDLSFNRI 156
Query: 205 MTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRL 264
T+ L+ L +L L L N + +G+ ++ L +N L + S + L
Sbjct: 157 ETVHPTALSDLASLVELDLTNNNIVSLEDNCFKGMNTLEVLVFRNNRLLD-VPASNLWHL 215
Query: 265 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 324
+LK L ++ N VR + GL +L +LS N + L+ +F L +L HLDL+ N
Sbjct: 216 HALKSLDMSLNLVEFVRNDSFEGLKELLALSVQGNVMSELDLSAFEGLISLKHLDLSDNN 275
Query: 325 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDND 372
+ V L+ LSNLT L+L N L L L+EL L D
Sbjct: 276 LTMVPTQQLSKLSNLTYLNLGGNRFSQLPAVAFLNLFHLRELHLSRLD 323
Score = 197 (74.4 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 66/228 (28%), Positives = 107/228 (46%)
Query: 165 PLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQ 224
P L+ LDLS N + L + +F+ S L L+LS N + +L + L L +L L
Sbjct: 93 PFYMKLEILDLSQNIIETLGSKNFEYQSELRTLNLSRNLVSSLHKHAFKGLTNLLLLDLS 152
Query: 225 GNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGA 284
NR+ AL L S+ +LDL++N + L + +++L+VL +N+ V
Sbjct: 153 FNRIETVHPTALSDLASLVELDLTNNNIVS-LEDNCFKGMNTLEVLVFRNNRLLDVPASN 211
Query: 285 LAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDL 344
L L L SL N ++ + + SF L L L + N + + ++ L +L LDL
Sbjct: 212 LWHLHALKSLDMSLNLVEFVRNDSFEGLKELLALSVQGNVMSELDLSAFEGLISLKHLDL 271
Query: 345 SHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVG-FNTMDLEL 391
S N L + ++ L +L L L N S P ++ F+ +L L
Sbjct: 272 SDNNLTMVPTQQLSKLSNLTYLNLGGNRFSQLPAVAFLNLFHLRELHL 319
Score = 178 (67.7 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 70/240 (29%), Positives = 108/240 (45%)
Query: 143 SPLQALGLPNNLLSVVPTSAL--AP--LAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLD 198
S Q LG N ++ +AL P L P ++L+ N++ LE S L LD
Sbjct: 44 SKCQCLGGEANSRALCVDAALEDVPIQLNPETKYINLTVNRIRTLE-FSLPFYMKLEILD 102
Query: 199 LSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGP 258
LS N + TL LR L L N ++ A +GL ++ LDLS N + + P
Sbjct: 103 LSQNIIETLGSKNFEYQSELRTLNLSRNLVSSLHKHAFKGLTNLLLLDLSFNRIE-TVHP 161
Query: 259 STVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI-DVLEDHSFRALSTLSH 317
+ + L+SL L + +N S+ G++ L L +N++ DV + + L L
Sbjct: 162 TALSDLASLVELDLTNNNIVSLEDNCFKGMNTLEVLVFRNNRLLDVPASNLWH-LHALKS 220
Query: 318 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEP 377
LD++ N + V S L L L + N + L L SL+ L L DN+++M P
Sbjct: 221 LDMSLNLVEFVRNDSFEGLKELLALSVQGNVMSELDLSAFEGLISLKHLDLSDNNLTMVP 280
Score = 173 (66.0 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 80/298 (26%), Positives = 138/298 (46%)
Query: 84 ISESL--RGLEPDERVSLLDCTLSNVTVLPGKFLEGVT-LHGLVISSGELKNISDGAFIG 140
I E+L + E + L+ + + V+ L +G+T L L +S ++ + A
Sbjct: 107 IIETLGSKNFEYQSELRTLNLSRNLVSSLHKHAFKGLTNLLLLDLSFNRIETVHPTALSD 166
Query: 141 LSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLS 200
L+S L L L NN + + + + L+ L +N+L + ++ L +L LD+S
Sbjct: 167 LAS-LVELDLTNNNIVSLEDNCFKGMN-TLEVLVFRNNRLLDVPASNLWHLHALKSLDMS 224
Query: 201 YNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPST 260
N + + D L L L +QGN ++ ++A +GL S+ LDLS N L + P+
Sbjct: 225 LNLVEFVRNDSFEGLKELLALSVQGNVMSELDLSAFEGLISLKHLDLSDNNLT--MVPTQ 282
Query: 261 -VPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 319
+ +LS+L L++ N+FS + A L L L H +++D L+ RA +HL
Sbjct: 283 QLSKLSNLTYLNLGGNRFSQLPAVAFLNLFHLREL--HLSRLDFLQRIDSRAFVDNTHLQ 340
Query: 320 LAH-NRIVAVSGASLAHLS---NLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 373
H N +S + N+ + + N L+ L P+ LQ+L L DN +
Sbjct: 341 TLHLNNNPQLSDIPMRLFQGNPNILEVYMQSNSLQTLYSAQF-PVDQLQKLYLGDNPL 397
Score = 126 (49.4 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 41/118 (34%), Positives = 64/118 (54%)
Query: 290 KLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFL 349
KL L N I+ L +F S L L+L+ N + ++ + L+NL LDLS N +
Sbjct: 97 KLEILDLSQNIIETLGSKNFEYQSELRTLNLSRNLVSSLHKHAFKGLTNLLLLDLSFNRI 156
Query: 350 RALTQDLITPLKSLQELRLDDNDI-SMEPECIYVGFNTMDLELIYSGVWRHSTLL-IP 405
+ ++ L SL EL L +N+I S+E C + G NT LE++ V+R++ LL +P
Sbjct: 157 ETVHPTALSDLASLVELDLTNNNIVSLEDNC-FKGMNT--LEVL---VFRNNRLLDVP 208
Score = 51 (23.0 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L SLK L ++ N + V L+ L LT L+ N+ L +F N+
Sbjct: 263 LISLKHLDLSDNNLTMVPTQQLSKLSNLTYLNLGGNRFSQLPAVAFLNL 311
Score = 47 (21.6 bits), Expect = 6.3e-10, Sum P(2) = 6.3e-10
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLE 685
LS+L L++ N+FS + A L L L H +++D L+
Sbjct: 287 LSNLTYLNLGGNRFSQLPAVAFLNLFHLREL--HLSRLDFLQ 326
Score = 44 (20.5 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 13/49 (26%), Positives = 19/49 (38%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L LS+ N S + A GL L L N + ++ S +
Sbjct: 239 LKELLALSVQGNVMSELDLSAFEGLISLKHLDLSDNNLTMVPTQQLSKL 287
>TAIR|locus:2091353 [details] [associations]
symbol:AT3G28040 species:3702 "Arabidopsis thaliana"
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0006468 "protein phosphorylation"
evidence=IEA;ISS] [GO:0007169 "transmembrane receptor protein
tyrosine kinase signaling pathway" evidence=ISS] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0002237 "response to molecule of bacterial origin"
evidence=RCA] [GO:0007165 "signal transduction" evidence=RCA]
[GO:0010103 "stomatal complex morphogenesis" evidence=RCA]
[GO:0048443 "stamen development" evidence=RCA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000719 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 PROSITE:PS51450 GO:GO:0016021 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR eggNOG:COG0515
SUPFAM:SSF56112 GO:GO:0004672 HOGENOM:HOG000116551
InterPro:IPR013210 Pfam:PF08263 EMBL:AB028616 EMBL:FJ708729
IPI:IPI00540962 RefSeq:NP_189443.2 UniGene:At.28161
ProteinModelPortal:Q9LRT1 SMR:Q9LRT1 PaxDb:Q9LRT1 PRIDE:Q9LRT1
EnsemblPlants:AT3G28040.1 GeneID:822428 KEGG:ath:AT3G28040
GeneFarm:2365 TAIR:At3g28040 InParanoid:Q9LRT1 OMA:CTSQIPS
PhylomeDB:Q9LRT1 ProtClustDB:CLSN2680201 Uniprot:Q9LRT1
Length = 1016
Score = 226 (84.6 bits), Expect = 8.5e-16, Sum P(2) = 8.5e-16
Identities = 93/297 (31%), Positives = 141/297 (47%)
Query: 99 LLDCTLSNVTVLPGKFLEGVT-LHGLVISSGELKNISDGAFIGLSSP--LQALGLP-NNL 154
+++ +L + L GK G+ L L + S N + G LS+ LQ L L NNL
Sbjct: 79 VIELSLDGLA-LTGKINRGIQKLQRLKVLSLSNNNFT-GNINALSNNNHLQKLDLSHNNL 136
Query: 155 LSVVPTSALAPLAPNLDRLDLSHNQLY-KLENTSFKGLSSLNFLDLSYNKLMTLSQDCLA 213
+P+S L + +L LDL+ N L + F SSL +L LS+N L L
Sbjct: 137 SGQIPSS-LGSIT-SLQHLDLTGNSFSGTLSDDLFNNCSSLRYLSLSHNHLEGQIPSTLF 194
Query: 214 PLVTLRVLRLQGNRLT--VSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLS 271
L L L NR + S V+ + L + LDLS N L+G + P + L +LK L
Sbjct: 195 RCSVLNSLNLSRNRFSGNPSFVSGIWRLERLRALDLSSNSLSGSI-PLGILSLHNLKELQ 253
Query: 272 IAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDH-------SFRALSTLSHLDLAHNR 324
+ NQFS GAL D L H N++D+ +H + + L +L+H D+++N
Sbjct: 254 LQRNQFS----GALPS-D--IGLCPHLNRVDLSSNHFSGELPRTLQKLKSLNHFDVSNNL 306
Query: 325 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISME-PECI 380
+ + ++ L LD S N L I+ L+SL++L L +N +S E PE +
Sbjct: 307 LSGDFPPWIGDMTGLVHLDFSSNELTGKLPSSISNLRSLKDLNLSENKLSGEVPESL 363
Score = 172 (65.6 bits), Expect = 6.1e-10, Sum P(2) = 6.1e-10
Identities = 85/306 (27%), Positives = 131/306 (42%)
Query: 77 NKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLP-----GK--FLEGV----TLHGLVI 125
N S L +S S LE +L C++ N L G F+ G+ L L +
Sbjct: 171 NCSSLRYLSLSHNHLEGQIPSTLFRCSVLNSLNLSRNRFSGNPSFVSGIWRLERLRALDL 230
Query: 126 SSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLY-KLE 184
SS L + L + L+ L L N S S + L P+L+R+DLS N +L
Sbjct: 231 SSNSLSGSIPLGILSLHN-LKELQLQRNQFSGALPSDIG-LCPHLNRVDLSSNHFSGELP 288
Query: 185 NTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTD 244
T K L SLN D+S N L + + L L N LT + +++ LRS+ D
Sbjct: 289 RTLQK-LKSLNHFDVSNNLLSGDFPPWIGDMTGLVHLDFSSNELTGKLPSSISNLRSLKD 347
Query: 245 LDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFS-SVRRGAL-AGLDKLTSLSCHHNQID 302
L+LS N L+G + P ++ L ++ + N FS ++ G GL ++ +
Sbjct: 348 LNLSENKLSGEV-PESLESCKELMIVQLKGNDFSGNIPDGFFDLGLQEMDFSG--NGLTG 404
Query: 303 VLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKS 362
+ S R +L LDL+HN + + ++ L+LS N I L++
Sbjct: 405 SIPRGSSRLFESLIRLDLSHNSLTGSIPGEVGLFIHMRYLNLSWNHFNTRVPPEIEFLQN 464
Query: 363 LQELRL 368
L L L
Sbjct: 465 LTVLDL 470
Score = 159 (61.0 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 78/277 (28%), Positives = 120/277 (43%)
Query: 59 IKNDLCACDLPHTLRCTANKSDLYAISESLRGLEPDERV---SLLDCTLSNVTVLPGKFL 115
+ N+L + D P + L S L G P SL D LS L G+
Sbjct: 302 VSNNLLSGDFPPWIGDMTGLVHLDFSSNELTGKLPSSISNLRSLKDLNLSE-NKLSGEVP 360
Query: 116 EGV-TLHGLVI---SSGELK-NISDGAF-IGLSSPLQALGLPNNLLSVVPTSALAPLAPN 169
E + + L+I + NI DG F +GL + G N L +P + + L +
Sbjct: 361 ESLESCKELMIVQLKGNDFSGNIPDGFFDLGLQE-MDFSG--NGLTGSIPRGS-SRLFES 416
Query: 170 LDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLT 229
L RLDLSHN L + +L+LS+N T + L L VL L+ + L
Sbjct: 417 LIRLDLSHNSLTGSIPGEVGLFIHMRYLNLSWNHFNTRVPPEIEFLQNLTVLDLRNSALI 476
Query: 230 VSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLD 289
SV A + +S+ L L N L G + P + SSLK+LS++HN + +L+ L
Sbjct: 477 GSVPADICESQSLQILQLDGNSLTGSI-PEGIGNCSSLKLLSLSHNNLTGPIPKSLSNLQ 535
Query: 290 KLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 326
+L L N++ L L ++++ NR++
Sbjct: 536 ELKILKLEANKLSGEIPKELGDLQNLLLVNVSFNRLI 572
Score = 144 (55.7 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 61/231 (26%), Positives = 98/231 (42%)
Query: 145 LQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKL 204
L + NNLLS + + L LD S N+L +S L SL L+LS NKL
Sbjct: 297 LNHFDVSNNLLSGDFPPWIGDMT-GLVHLDFSSNELTGKLPSSISNLRSLKDLNLSENKL 355
Query: 205 MTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRL 264
+ L L +++L+GN + ++ L + ++D S N L G + P RL
Sbjct: 356 SGEVPESLESCKELMIVQLKGNDFSGNIPDGFFDL-GLQEMDFSGNGLTGSI-PRGSSRL 413
Query: 265 -SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 323
SL L ++HN + G + + L+ N + L L+ LDL ++
Sbjct: 414 FESLIRLDLSHNSLTGSIPGEVGLFIHMRYLNLSWNHFNTRVPPEIEFLQNLTVLDLRNS 473
Query: 324 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 374
++ A + +L L L N L + I SL+ L L N+++
Sbjct: 474 ALIGSVPADICESQSLQILQLDGNSLTGSIPEGIGNCSSLKLLSLSHNNLT 524
Score = 143 (55.4 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 67/249 (26%), Positives = 107/249 (42%)
Query: 132 NISDGAF---IGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSF 188
N+ G F IG + L L +N L+ S+++ L +L L+LS N+L S
Sbjct: 305 NLLSGDFPPWIGDMTGLVHLDFSSNELTGKLPSSISNLR-SLKDLNLSENKLSGEVPESL 363
Query: 189 KGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGL-RSVTDLDL 247
+ L + L N D L L+ + GN LT S+ L S+ LDL
Sbjct: 364 ESCKELMIVQLKGNDFSGNIPDGFFDL-GLQEMDFSGNGLTGSIPRGSSRLFESLIRLDL 422
Query: 248 SHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDH 307
SHN L G + P V ++ L+++ N F++ + L LT L ++ +
Sbjct: 423 SHNSLTGSI-PGEVGLFIHMRYLNLSWNHFNTRVPPEIEFLQNLTVLDLRNSALIGSVPA 481
Query: 308 SFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELR 367
+L L L N + + + S+L L LSHN L ++ L+ L+ L+
Sbjct: 482 DICESQSLQILQLDGNSLTGSIPEGIGNCSSLKLLSLSHNNLTGPIPKSLSNLQELKILK 541
Query: 368 LDDNDISME 376
L+ N +S E
Sbjct: 542 LEANKLSGE 550
Score = 138 (53.6 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 51/182 (28%), Positives = 80/182 (43%)
Query: 170 LDRLDLSHNQLY-KLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRL 228
L +D S N L + S + SL LDLS+N L + + +R L L N
Sbjct: 392 LQEMDFSGNGLTGSIPRGSSRLFESLIRLDLSHNSLTGSIPGEVGLFIHMRYLNLSWNHF 451
Query: 229 TVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFS-SVRRGALAG 287
V ++ L+++T LDL ++ L G + P+ + SL++L + N + S+ G +
Sbjct: 452 NTRVPPEIEFLQNLTVLDLRNSALIGSV-PADICESQSLQILQLDGNSLTGSIPEG-IGN 509
Query: 288 LDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHN 347
L LS HN + S L L L L N++ L L NL +++S N
Sbjct: 510 CSSLKLLSLSHNNLTGPIPKSLSNLQELKILKLEANKLSGEIPKELGDLQNLLLVNVSFN 569
Query: 348 FL 349
L
Sbjct: 570 RL 571
Score = 57 (25.1 bits), Expect = 8.5e-16, Sum P(2) = 8.5e-16
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 645 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
SSLK+LS++HN + +L+ L +L L N++
Sbjct: 511 SSLKLLSLSHNNLTGPIPKSLSNLQELKILKLEANKL 547
Score = 43 (20.2 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 28/97 (28%), Positives = 43/97 (44%)
Query: 307 HSFRALSTLSHLDLAHNRIVA-------VSGASLAHLSNLTTLD---LSHN-FLRALTQD 355
H+FR T H +L I+ +S L+ L LTT D +++N F AL
Sbjct: 844 HTFRP--TTIHFNLKPTNILLDEKNNPKISDFGLSRL--LTTQDGNTMNNNRFQNAL--G 897
Query: 356 LITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELI 392
+ P Q LR+++ +C GF + LEL+
Sbjct: 898 YVAPELECQNLRVNE-------KCDVYGFGVLILELV 927
Score = 41 (19.5 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 14/48 (29%), Positives = 22/48 (45%)
Query: 646 SLKVLSIAHNQFS-SVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
SL++L + N + S+ G + L LS HN + S SN+
Sbjct: 488 SLQILQLDGNSLTGSIPEG-IGNCSSLKLLSLSHNNLTGPIPKSLSNL 534
>UNIPROTKB|Q7L0X0 [details] [associations]
symbol:TRIL "TLR4 interactor with leucine rich repeats"
species:9606 "Homo sapiens" [GO:0006954 "inflammatory response"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0002718 "regulation of cytokine production involved in immune
response" evidence=IDA] [GO:0001530 "lipopolysaccharide binding"
evidence=IDA] [GO:0046696 "lipopolysaccharide receptor complex"
evidence=IDA] [GO:0034142 "toll-like receptor 4 signaling pathway"
evidence=IDA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
EMBL:CH471073 GO:GO:0006954 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0045087 EMBL:CH236948
InterPro:IPR000372 SMART:SM00013 GO:GO:0034142 GO:GO:0046696
GO:GO:0001530 HSSP:Q9BZR6 EMBL:AC005013 Pfam:PF01463 EMBL:AB014544
EMBL:BC036337 IPI:IPI00006556 RefSeq:NP_055632.2 UniGene:Hs.21572
ProteinModelPortal:Q7L0X0 SMR:Q7L0X0 IntAct:Q7L0X0 DMDM:311033514
PRIDE:Q7L0X0 GeneID:9865 KEGG:hsa:9865 UCSC:uc003szt.3 CTD:9865
GeneCards:GC07M028992 HGNC:HGNC:22200 MIM:613356 neXtProt:NX_Q7L0X0
HOVERGEN:HBG066060 GenomeRNAi:9865 NextBio:37186
Genevestigator:Q7L0X0 GO:GO:0002718 Uniprot:Q7L0X0
Length = 811
Score = 241 (89.9 bits), Expect = 9.2e-16, Sum P(2) = 9.2e-16
Identities = 100/312 (32%), Positives = 135/312 (43%)
Query: 64 CACDLPHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGL 123
C C P L CT + + SL SL ++N+T L G L L
Sbjct: 31 CDCQHPQHLLCTNRGLRVVPKTSSLPSPHDVLTYSLGGNFITNITAFDFHRL-G-QLRRL 88
Query: 124 VISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKL 183
+ +++++ F LS L+ L L NNLL + LAPL L L + N++ +L
Sbjct: 89 DLQYNQIRSLHPKTFEKLSR-LEELYLGNNLLQALAPGTLAPLR-KLRILYANGNEISRL 146
Query: 184 ENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVT 243
SF+GL SL L L N L L APL L L L+ NR+ A L +
Sbjct: 147 SRGSFEGLESLVKLRLDGNALGALPDAVFAPLGNLLYLHLESNRIRFLGKNAFAQLGKLR 206
Query: 244 DLDLSHNLLAGPLG-PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID 302
L+LS N L L +T L SL L ++ N + L +L LS NQ+
Sbjct: 207 FLNLSANELQPSLRHAATFAPLRSLSSLILSANNLQHLGPRIFQHLPRLGLLSLRGNQLT 266
Query: 303 VLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKS 362
L +F L L L L NR+ + A L L +L LDLS N L AL L
Sbjct: 267 HLAPEAFWGLEALRELRLEGNRLSQLPTALLEPLHSLEALDLSGNELSALHPATFGHLGR 326
Query: 363 LQELRLDDNDIS 374
L+EL L +N +S
Sbjct: 327 LRELSLRNNALS 338
Score = 240 (89.5 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 85/275 (30%), Positives = 126/275 (45%)
Query: 100 LDCTLSNVTVLPGKFLEGVT-LHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVV 158
LD + + L K E ++ L L + + L+ ++ G L L+ L N +S +
Sbjct: 88 LDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQALAPGTLAPLRK-LRILYANGNEISRL 146
Query: 159 PTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTL 218
+ L +L +L L N L L + F L +L +L L N++ L ++ A L L
Sbjct: 147 SRGSFEGLE-SLVKLRLDGNALGALPDAVFAPLGNLLYLHLESNRIRFLGKNAFAQLGKL 205
Query: 219 RVLRLQGNRLTVSV--VAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQ 276
R L L N L S+ A LRS++ L LS N L LGP L L +LS+ NQ
Sbjct: 206 RFLNLSANELQPSLRHAATFAPLRSLSSLILSANNLQH-LGPRIFQHLPRLGLLSLRGNQ 264
Query: 277 FSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHL 336
+ + A GL+ L L N++ L L +L LDL+ N + A+ A+ HL
Sbjct: 265 LTHLAPEAFWGLEALRELRLEGNRLSQLPTALLEPLHSLEALDLSGNELSALHPATFGHL 324
Query: 337 SNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
L L L +N L AL+ D+ +L L LD N
Sbjct: 325 GRLRELSLRNNALSALSGDIFAASPALYRLDLDGN 359
Score = 235 (87.8 bits), Expect = 4.2e-15, Sum P(2) = 4.2e-15
Identities = 80/256 (31%), Positives = 120/256 (46%)
Query: 141 LSSPLQAL--GLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLD 198
L SP L L N ++ + L L RLDL +NQ+ L +F+ LS L L
Sbjct: 55 LPSPHDVLTYSLGGNFITNITAFDFHRLG-QLRRLDLQYNQIRSLHPKTFEKLSRLEELY 113
Query: 199 LSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGP 258
L N L L+ LAPL LR+L GN ++ + +GL S+ L L N L G L
Sbjct: 114 LGNNLLQALAPGTLAPLRKLRILYANGNEISRLSRGSFEGLESLVKLRLDGNAL-GALPD 172
Query: 259 STVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHS--FRALSTLS 316
+ L +L L + N+ + + A A L KL L+ N++ H+ F L +LS
Sbjct: 173 AVFAPLGNLLYLHLESNRIRFLGKNAFAQLGKLRFLNLSANELQPSLRHAATFAPLRSLS 232
Query: 317 HLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISME 376
L L+ N + + HL L L L N L L + L++L+ELRL+ N +S
Sbjct: 233 SLILSANNLQHLGPRIFQHLPRLGLLSLRGNQLTHLAPEAFWGLEALRELRLEGNRLSQL 292
Query: 377 PECIYVGFNTMD-LEL 391
P + ++++ L+L
Sbjct: 293 PTALLEPLHSLEALDL 308
Score = 144 (55.7 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 52/149 (34%), Positives = 74/149 (49%)
Query: 93 PDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSG-ELKNISDGAFIGLSSPLQALGLP 151
P +S L + +N+ L + + + GL+ G +L +++ AF GL + L+ L L
Sbjct: 227 PLRSLSSLILSANNLQHLGPRIFQHLPRLGLLSLRGNQLTHLAPEAFWGLEA-LRELRLE 285
Query: 152 NNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDC 211
N LS +PT+ L PL +L+ LDLS N+L L +F L L L L N L LS D
Sbjct: 286 GNRLSQLPTALLEPLH-SLEALDLSGNELSALHPATFGHLGRLRELSLRNNALSALSGDI 344
Query: 212 LAPLVTLRVLRLQGNRLTVSVVAALQGLR 240
A L L L GN T L+GL+
Sbjct: 345 FAASPALYRLDLDGNGWTCD--CRLRGLK 371
Score = 130 (50.8 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 48/155 (30%), Positives = 73/155 (47%)
Query: 246 DLSH--NLLAGPLGPSTVPRLSSLK----VL--SIAHNQFSSVRRGALAGLDKLTSLSCH 297
D H +LL G VP+ SSL VL S+ N +++ L +L L
Sbjct: 32 DCQHPQHLLCTNRGLRVVPKTSSLPSPHDVLTYSLGGNFITNITAFDFHRLGQLRRLDLQ 91
Query: 298 HNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLI 357
+NQI L +F LS L L L +N + A++ +LA L L L + N + L++
Sbjct: 92 YNQIRSLHPKTFEKLSRLEELYLGNNLLQALAPGTLAPLRKLRILYANGNEISRLSRGSF 151
Query: 358 TPLKSLQELRLDDNDISMEPECIYVGF-NTMDLEL 391
L+SL +LRLD N + P+ ++ N + L L
Sbjct: 152 EGLESLVKLRLDGNALGALPDAVFAPLGNLLYLHL 186
Score = 45 (20.9 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL 684
L L +LS+ NQ + + A GL+ L L N++ L
Sbjct: 252 LPRLGLLSLRGNQLTHLAPEAFWGLEALRELRLEGNRLSQL 292
Score = 39 (18.8 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 15/51 (29%), Positives = 21/51 (41%)
Query: 639 ATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
AT L SL L ++ N + L +L LS NQ+ L +F
Sbjct: 223 ATFAPLRSLSSLILSANNLQHLGPRIFQHLPRLGLLSLRGNQLTHLAPEAF 273
Score = 38 (18.4 bits), Expect = 9.2e-16, Sum P(2) = 9.2e-16
Identities = 9/22 (40%), Positives = 11/22 (50%)
Query: 521 PKYQVCATLGEFPTDKPLLHCI 542
P+ ATL E D P L C+
Sbjct: 640 PESSDSATLRELRGDTPYLVCV 661
>WB|WBGene00011971 [details] [associations]
symbol:lron-9 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0018996 "molting
cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0040017 "positive regulation of
locomotion" evidence=IMP] InterPro:IPR001611 PROSITE:PS51450
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0018996
InterPro:IPR003591 SMART:SM00369 GO:GO:0040011 GO:GO:0040017
GeneTree:ENSGT00700000104286 EMBL:Z81130 UniGene:Cel.6867
GeneID:172529 KEGG:cel:CELE_T23G11.6 UCSC:T23G11.6c CTD:172529
NextBio:875913 PIR:T25194 RefSeq:NP_001076615.1
ProteinModelPortal:O02329 SMR:O02329 EnsemblMetazoa:T23G11.6a
WormBase:T23G11.6a HOGENOM:HOG000015968 InParanoid:O02329
OMA:CNLQTIP ArrayExpress:O02329 Uniprot:O02329
Length = 653
Score = 222 (83.2 bits), Expect = 9.4e-16, Sum P(2) = 9.4e-16
Identities = 74/253 (29%), Positives = 125/253 (49%)
Query: 129 ELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSF 188
ELK + D +F GL L+ L + L +P S + NL+ + S+N+L L F
Sbjct: 122 ELK-VGDDSFKGLEQTLRNLTIHACNLQTIPPSVDS--LENLETVVFSNNKLDSLGVDQF 178
Query: 189 KGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRL-QGNRLTVSVVAALQGLRSVTDLDL 247
K L++LD+S N + ++ + PL +L L + + N + +VV + L+++ LDL
Sbjct: 179 KNKKQLSYLDVSGNFITSIEEKAFEPLTSLETLVIGEHNFINETVVEEIGRLKALKTLDL 238
Query: 248 SH-NLLAGPLGPSTV-PRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLE 305
S + + P P T+ + ++VL ++ ++ G A L KL L N I+ +
Sbjct: 239 SRADGIFQP--PETLFKEIPQIEVLKLSGCSIPTLEPGQFATLKKLKELDLRVNLIENIT 296
Query: 306 DHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKS-LQ 364
++F L +L+ L LA N I + LS+L LDL N ++ + D+ PL L+
Sbjct: 297 AYAFDGLESLTRLSLAGNFISKLEPDVFFGLSSLEELDLGWNEIKTIPTDVFKPLTDKLK 356
Query: 365 ELRLDDNDISMEP 377
+ L +N IS P
Sbjct: 357 TISLRNNPISELP 369
Score = 168 (64.2 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 81/300 (27%), Positives = 127/300 (42%)
Query: 95 ERVSLLDCTLSNVTVLPGKFLEGVT-LHGLVISSGELKNISDGAFIGLSSPLQALGLPNN 153
+++S LD + + +T + K E +T L LVI N + IG L+ L L
Sbjct: 182 KQLSYLDVSGNFITSIEEKAFEPLTSLETLVIGEHNFINETVVEEIGRLKALKTLDLSRA 241
Query: 154 LLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLA 213
P L P ++ L LS + LE F L L LDL N + ++
Sbjct: 242 DGIFQPPETLFKEIPQIEVLKLSGCSIPTLEPGQFATLKKLKELDLRVNLIENITAYAFD 301
Query: 214 PLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTV--PRLSSLKVLS 271
L +L L L GN ++ GL S+ +LDL N + P+ V P LK +S
Sbjct: 302 GLESLTRLSLAGNFISKLEPDVFFGLSSLEELDLGWNEIKTI--PTDVFKPLTDKLKTIS 359
Query: 272 IAHNQFSSVRRGALAGLDKLTSLSCHHNQI--DVLEDHSFRALSTLSHLDLAHNRIVAVS 329
+ +N S + L L+KL+ C I D L+D+ L LDL+ I +
Sbjct: 360 LRNNPISELPSTGLGMLEKLSLAECGFTSISADQLKDYP-----KLEELDLSKCNISNIV 414
Query: 330 GASLAHLSN-LTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMD 388
+ + + L L+L N L++L +LI L +++ L + N + E + F D
Sbjct: 415 ENTFENQKDSLKKLNLQKNKLKSLP-NLIKNLPAIESLDVSSNPYRCDGELVNFVFGVED 473
Score = 133 (51.9 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 73/282 (25%), Positives = 122/282 (43%)
Query: 115 LEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLD 174
L G L L+ ++ +KN S I S +Q + P+ L LAP +L+ +
Sbjct: 62 LYGSNLDHLMKATEAVKNAS---LITSSISIQHMEFPDGGLPEF--GKLAPDLKSLEIKE 116
Query: 175 LSHNQLYKLENTSFKGLS-SLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVV 233
S K+ + SFKGL +L L + L T+ + L L + N+L V
Sbjct: 117 CSGQDELKVGDDSFKGLEQTLRNLTIHACNLQTIPPS-VDSLENLETVVFSNNKLDSLGV 175
Query: 234 AALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIA-HNQFSSVRRGALAGLDKLT 292
+ + ++ LD+S N + + P L+SL+ L I HN + + L L
Sbjct: 176 DQFKNKKQLSYLDVSGNFITSIEEKAFEP-LTSLETLVIGEHNFINETVVEEIGRLKALK 234
Query: 293 SLSCHH-NQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRA 351
+L + I + F+ + + L L+ I + A L L LDL N +
Sbjct: 235 TLDLSRADGIFQPPETLFKEIPQIEVLKLSGCSIPTLEPGQFATLKKLKELDLRVNLIEN 294
Query: 352 LTQDLITPLKSLQELRLDDNDIS-MEPECIYVGFNTMD-LEL 391
+T L+SL L L N IS +EP+ ++ G ++++ L+L
Sbjct: 295 ITAYAFDGLESLTRLSLAGNFISKLEPD-VFFGLSSLEELDL 335
Score = 55 (24.4 bits), Expect = 9.4e-16, Sum P(2) = 9.4e-16
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 643 LLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI--DVLEDH 687
L LK +S+ +N S + L L+KL+ C I D L+D+
Sbjct: 351 LTDKLKTISLRNNPISELPSTGLGMLEKLSLAECGFTSISADQLKDY 397
>MGI|MGI:1891468 [details] [associations]
symbol:Lgr4 "leucine-rich repeat-containing G
protein-coupled receptor 4" species:10090 "Mus musculus"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0004930
"G-protein coupled receptor activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0030539 "male
genitalia development" evidence=IMP] [GO:0035239 "tube
morphogenesis" evidence=IMP] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0050673 "epithelial cell proliferation" evidence=IMP]
[GO:0061290 "canonical Wnt receptor signaling pathway involved in
metanephric kidney development" evidence=IMP] [GO:0072202 "cell
differentiation involved in metanephros development" evidence=IMP]
[GO:0072224 "metanephric glomerulus development" evidence=IMP]
[GO:0072282 "metanephric nephron tubule morphogenesis"
evidence=IMP] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450 MGI:MGI:1891468
GO:GO:0016021 GO:GO:0005886 GO:GO:0045892 GO:GO:0045893
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030539
GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 EMBL:AL928922
GeneTree:ENSGT00650000092962 GO:GO:0061290 GO:GO:0072282 CTD:55366
HOVERGEN:HBG031675 KO:K04309 OMA:DGYWSDC OrthoDB:EOG476JZH
ChiTaRS:LGR4 GO:GO:0072202 GO:GO:0072224 EMBL:AL845423
EMBL:AY255619 EMBL:AK044357 EMBL:BC056637 IPI:IPI00753252
RefSeq:NP_766259.2 UniGene:Mm.277351 UniGene:Mm.485992
ProteinModelPortal:A2ARI4 SMR:A2ARI4 STRING:A2ARI4
PhosphoSite:A2ARI4 PRIDE:A2ARI4 DNASU:107515
Ensembl:ENSMUST00000046548 GeneID:107515 KEGG:mmu:107515
UCSC:uc008lmq.1 HOGENOM:HOG000231829 InParanoid:A2ARI4
NextBio:358950 Bgee:A2ARI4 Genevestigator:A2ARI4 Uniprot:A2ARI4
Length = 951
Score = 230 (86.0 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 77/258 (29%), Positives = 115/258 (44%)
Query: 140 GLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDL 199
GLS+ QAL + N ++ +P A P L+ L L+ N L + + GL L L L
Sbjct: 54 GLSAFTQALDISMNNITQLPEDAFKNF-PFLEELQLAGNDLSFIHPKALSGLKELKVLTL 112
Query: 200 SYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAG-PLGP 258
N+L T+ + + L L+ LRL N +T + +GL + L L N+L P+ P
Sbjct: 113 QNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNILTEVPVRP 172
Query: 259 STVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHL 318
+ L +L+ L++A N SS+ A L L L H+N+I L H F L L L
Sbjct: 173 --LSNLPTLQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGLDNLETL 230
Query: 319 DLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPE 378
DL +N + A A L +L L N + + L+ + L DN +S
Sbjct: 231 DLNYNNLDEFPQAIKA-LPSLKELGFHSNSISVIPDGAFAGNPLLRTIHLYDNPLSFVGN 289
Query: 379 CIYVGFNTMDLE-LIYSG 395
+ N DL L+ G
Sbjct: 290 SAF--HNLSDLHSLVIRG 305
Score = 203 (76.5 bits), Expect = 9.5e-13, Sum P(2) = 9.5e-13
Identities = 76/270 (28%), Positives = 124/270 (45%)
Query: 105 SNVTVLPGKFLEGVT-LHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSAL 163
++++ + K L G+ L L + + +LK + A GLS+ LQ+L L N ++ VP +
Sbjct: 91 NDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSA-LQSLRLDANHITSVPEDSF 149
Query: 164 APLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRL 223
L L L L N L ++ L +L L L+ N + ++ L +L VL L
Sbjct: 150 EGLV-QLRHLWLDDNILTEVPVRPLSNLPTLQALTLALNNISSIPDFAFTNLSSLVVLHL 208
Query: 224 QGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRG 283
N++ GL ++ LDL++N L P + L SLK L N S + G
Sbjct: 209 HNNKIKSLSQHCFDGLDNLETLDLNYNNLDE--FPQAIKALPSLKELGFHSNSISVIPDG 266
Query: 284 ALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLD 343
A AG L ++ + N + + + +F LS L L + +V +LA +L +L
Sbjct: 267 AFAGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASLVQWF-PNLAGTVHLESLT 325
Query: 344 LSHNFLRALTQDLITPLKSLQELRLDDNDI 373
L+ + ++ DL K L+ L L NDI
Sbjct: 326 LTGTKISSIPDDLCQNQKMLRTLDLSYNDI 355
Score = 195 (73.7 bits), Expect = 7.6e-11, Sum P(2) = 7.6e-11
Identities = 90/326 (27%), Positives = 140/326 (42%)
Query: 71 TLRCTANKSDLYAISE-SLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGE 129
+LR AN + ++ E S GL + L D L+ V V P L TL L ++
Sbjct: 133 SLRLDANH--ITSVPEDSFEGLVQLRHLWLDDNILTEVPVRPLSNLP--TLQALTLALNN 188
Query: 130 LKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFK 189
+ +I D AF LSS L L L NN + + L NL+ LDL++N L + + K
Sbjct: 189 ISSIPDFAFTNLSS-LVVLHLHNNKIKSLSQHCFDGL-DNLETLDLNYNNLDEFPQ-AIK 245
Query: 190 GLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSH 249
L SL L N + + A LR + L N L+ +A L +DL H
Sbjct: 246 ALPSLKELGFHSNSISVIPDGAFAGNPLLRTIHLYDNPLSFVGNSAFHNL---SDL---H 299
Query: 250 NLLAGPLGPSTV---PRLSS---LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDV 303
+L+ G S V P L+ L+ L++ + SS+ L +L +N D+
Sbjct: 300 SLVIR--GASLVQWFPNLAGTVHLESLTLTGTKISSIPDDLCQNQKMLRTLDLSYN--DI 355
Query: 304 LEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSL 363
+ SF L + L N+I + + L++L LDLS N +R + L ++
Sbjct: 356 RDLPSFNGCRALEEISLQRNQISLIKETTFQGLTSLRILDLSRNLIREIHSGAFAKLGTI 415
Query: 364 QELRLDDNDISMEPECIYVGFNTMDL 389
L + N+++ P G N + L
Sbjct: 416 TNLDVSFNELTSFPTEGLNGLNQLKL 441
Score = 180 (68.4 bits), Expect = 8.3e-09, Sum P(2) = 8.3e-09
Identities = 71/275 (25%), Positives = 124/275 (45%)
Query: 100 LDCTLSNVTVLPG-KFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVV 158
L L+N++ +P F +L L + + ++K++S F GL + L+ L L N L
Sbjct: 182 LTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGLDN-LETLDLNYNNLDEF 240
Query: 159 PTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTL 218
P A+ L P+L L N + + + +F G L + L N L + L L
Sbjct: 241 P-QAIKAL-PSLKELGFHSNSISVIPDGAFAGNPLLRTIHLYDNPLSFVGNSAFHNLSDL 298
Query: 219 RVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFS 278
L ++G L V L G + L L+ ++ + L+ L +++N
Sbjct: 299 HSLVIRGASL-VQWFPNLAGTVHLESLTLTGTKISS-IPDDLCQNQKMLRTLDLSYNDIR 356
Query: 279 SVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSN 338
+ + G L +S NQI ++++ +F+ L++L LDL+ N I + + A L
Sbjct: 357 DLP--SFNGCRALEEISLQRNQISLIKETTFQGLTSLRILDLSRNLIREIHSGAFAKLGT 414
Query: 339 LTTLDLSHNFLRAL-TQDL--ITPLKSLQELRLDD 370
+T LD+S N L + T+ L + LK + +L D
Sbjct: 415 ITNLDVSFNELTSFPTEGLNGLNQLKLVGNFQLKD 449
Score = 164 (62.8 bits), Expect = 8.4e-11, Sum P(2) = 8.4e-11
Identities = 54/180 (30%), Positives = 87/180 (48%)
Query: 219 RVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFS 278
+ L + N +T A + + +L L+ N L+ + P + L LKVL++ +NQ
Sbjct: 60 QALDISMNNITQLPEDAFKNFPFLEELQLAGNDLSF-IHPKALSGLKELKVLTLQNNQLK 118
Query: 279 SVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSN 338
+V A+ GL L SL N I + + SF L L HL L N + V L++L
Sbjct: 119 TVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNILTEVPVRPLSNLPT 178
Query: 339 LTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI-SMEPECIYVGFNTMD-LELIYSGV 396
L L L+ N + ++ T L SL L L +N I S+ C + G + ++ L+L Y+ +
Sbjct: 179 LQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHC-FDGLDNLETLDLNYNNL 237
Score = 73 (30.8 bits), Expect = 8.4e-11, Sum P(2) = 8.4e-11
Identities = 25/86 (29%), Positives = 40/86 (46%)
Query: 608 TIHHHACFIPVAQQED-DINRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALA 666
++ H CF + E D+N NN D ++A L SLK L N S + GA A
Sbjct: 215 SLSQH-CFDGLDNLETLDLNYNNLDEFPQAIKA----LPSLKELGFHSNSISVIPDGAFA 269
Query: 667 GLDKLTSLSCHHNQIDVLEDHSFSNV 692
G L ++ + N + + + +F N+
Sbjct: 270 GNPLLRTIHLYDNPLSFVGNSAFHNL 295
Score = 51 (23.0 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 12/47 (25%), Positives = 22/47 (46%)
Query: 646 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
+L+ +S+ NQ S ++ GL L L N I + +F+ +
Sbjct: 366 ALEEISLQRNQISLIKETTFQGLTSLRILDLSRNLIREIHSGAFAKL 412
Score = 44 (20.5 bits), Expect = 5.8e-15, Sum P(2) = 5.8e-15
Identities = 10/46 (21%), Positives = 23/46 (50%)
Query: 647 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L+ L +++N + + G L +S NQI ++++ +F +
Sbjct: 345 LRTLDLSYNDIRDLP--SFNGCRALEEISLQRNQISLIKETTFQGL 388
Score = 41 (19.5 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L ++ L ++ N+ +S L GL++L L + D L F+N+
Sbjct: 412 LGTITNLDVSFNELTSFPTEGLNGLNQL-KLVGNFQLKDALAARDFANL 459
Score = 37 (18.1 bits), Expect = 3.1e-14, Sum P(2) = 3.1e-14
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 503 KNTNCSRPWVSLKQLPWSPKYQVCATLG 530
K+ +R + +L+ L YQ CA G
Sbjct: 448 KDALAARDFANLRSLSVPYAYQCCAFWG 475
>UNIPROTKB|G3X6G8 [details] [associations]
symbol:LGR6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR002131 PRINTS:PR00373
PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0016500
GeneTree:ENSGT00650000092962 OMA:AYGKAPS EMBL:DAAA02043707
EMBL:DAAA02043700 EMBL:DAAA02043701 EMBL:DAAA02043702
EMBL:DAAA02043703 EMBL:DAAA02043704 EMBL:DAAA02043705
EMBL:DAAA02043706 Ensembl:ENSBTAT00000006288 Uniprot:G3X6G8
Length = 943
Score = 225 (84.3 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 84/257 (32%), Positives = 120/257 (46%)
Query: 90 GLEPDERVSLLDCTLSNVTVL-PGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQAL 148
GL+P + LD +++++T L PG F L L +S L +I AF GLSS L+ L
Sbjct: 60 GLDP--LTAYLDLSMNSLTELWPGVFHHLRFLEELRLSGNRLAHIPGQAFSGLSS-LKIL 116
Query: 149 GLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLS 208
L NN L +P AL L P L L L N + + + SF+GL+SL L L N L +
Sbjct: 117 MLQNNRLGGIPAEALWEL-PGLQSLRLDANLISLVPDRSFEGLTSLRHLWLDDNALTEIP 175
Query: 209 QDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLK 268
L+ L L+ + L NR+ A L S+ L L HN LG + L +L+
Sbjct: 176 VRALSHLRALQAVTLALNRIGRVPDYAFWNLSSLVVLHL-HNNRIRHLGAHSFEGLQNLE 234
Query: 269 VLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAV 328
L + NQ A+ L +L L H+N I + + +F L + N I V
Sbjct: 235 TLDLNCNQLHEFPV-AIQTLGRLQELGFHNNNIRAIPEKAFLGNPLLQTIHFYDNPIQFV 293
Query: 329 SGASLAHLSNLTTLDLS 345
++ HL L TL L+
Sbjct: 294 GRSAFQHLPGLHTLSLN 310
Score = 214 (80.4 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 81/230 (35%), Positives = 115/230 (50%)
Query: 155 LSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAP 214
LS VP + L PL LD LS N L +L F L L L LS N+L + +
Sbjct: 54 LSTVP-AGLDPLTAYLD---LSMNSLTELWPGVFHHLRFLEELRLSGNRLAHIPGQAFSG 109
Query: 215 LVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPS-TVPRLSSLKVLSIA 273
L +L++L LQ NRL AL L + L L NL++ L P + L+SL+ L +
Sbjct: 110 LSSLKILMLQNNRLGGIPAEALWELPGLQSLRLDANLIS--LVPDRSFEGLTSLRHLWLD 167
Query: 274 HNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASL 333
N + + AL+ L L +++ N+I + D++F LS+L L L +NRI + S
Sbjct: 168 DNALTEIPVRALSHLRALQAVTLALNRIGRVPDYAFWNLSSLVVLHLHNNRIRHLGAHSF 227
Query: 334 AHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVG 383
L NL TLDL+ N L + T L LQEL +N+I PE ++G
Sbjct: 228 EGLQNLETLDLNCNQLHEFPVAIQT-LGRLQELGFHNNNIRAIPEKAFLG 276
Score = 198 (74.8 bits), Expect = 9.9e-13, Sum P(2) = 9.9e-13
Identities = 64/204 (31%), Positives = 96/204 (47%)
Query: 170 LDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLT 229
L+ L LS N+L + +F GLSSL L L N+L + + L L L+ LRL N ++
Sbjct: 89 LEELRLSGNRLAHIPGQAFSGLSSLKILMLQNNRLGGIPAEALWELPGLQSLRLDANLIS 148
Query: 230 VSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLD 289
+ + +GL S+ L L N L + + L +L+ +++A N+ V A L
Sbjct: 149 LVPDRSFEGLTSLRHLWLDDNALT-EIPVRALSHLRALQAVTLALNRIGRVPDYAFWNLS 207
Query: 290 KLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFL 349
L L H+N+I L HSF L L LDL N++ A + L L L +N +
Sbjct: 208 SLVVLHLHNNRIRHLGAHSFEGLQNLETLDLNCNQLHEFPVA-IQTLGRLQELGFHNNNI 266
Query: 350 RALTQDLITPLKSLQELRLDDNDI 373
RA+ + LQ + DN I
Sbjct: 267 RAIPEKAFLGNPLLQTIHFYDNPI 290
Score = 195 (73.7 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 86/316 (27%), Positives = 134/316 (42%)
Query: 67 DLP--HTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLV 124
+LP +LR AN L S GL + L D L+ + V L L +
Sbjct: 133 ELPGLQSLRLDANLISLVP-DRSFEGLTSLRHLWLDDNALTEIPVRALSHLRA--LQAVT 189
Query: 125 ISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLE 184
++ + + D AF LSS L L L NN + + + L NL+ LDL+ NQL++
Sbjct: 190 LALNRIGRVPDYAFWNLSS-LVVLHLHNNRIRHLGAHSFEGLQ-NLETLDLNCNQLHEFP 247
Query: 185 NTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTD 244
+ + L L L N + + + L+ + N + +A Q L +
Sbjct: 248 -VAIQTLGRLQELGFHNNNIRAIPEKAFLGNPLLQTIHFYDNPIQFVGRSAFQHLPGLHT 306
Query: 245 LDLSHNLLAGPLGPSTVPRL---SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 301
L L+ G P L +SL+ L++ + G L +L L HN I
Sbjct: 307 LSLN-----GATDIQEFPDLRGTTSLESLTLTRAGLQRLPPGMCQQLPRLRVLELSHNLI 361
Query: 302 DVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLK 361
+ L S R L + L HNRI V + L+ L +LDLS N +R++ + + L+
Sbjct: 362 EGLP--SLRGCQKLEEIGLQHNRIWEVRADTFRELTFLRSLDLSWNAIRSIHPEAFSTLR 419
Query: 362 SLQELRLDDNDISMEP 377
SL +L L N +S+ P
Sbjct: 420 SLVKLDLTGNQLSVLP 435
Score = 155 (59.6 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 59/180 (32%), Positives = 83/180 (46%)
Query: 194 LNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLA 253
L ++D S L T+ L PL L L N LT LR + +L LS N LA
Sbjct: 44 LLWVDCSERGLSTVPAG-LDPLTAY--LDLSMNSLTELWPGVFHHLRFLEELRLSGNRLA 100
Query: 254 GPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALS 313
G + LSSLK+L + +N+ + AL L L SL N I ++ D SF L+
Sbjct: 101 HIPGQA-FSGLSSLKILMLQNNRLGGIPAEALWELPGLQSLRLDANLISLVPDRSFEGLT 159
Query: 314 TLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 373
+L HL L N + + +L+HL L + L+ N + + L SL L L +N I
Sbjct: 160 SLRHLWLDDNALTEIPVRALSHLRALQAVTLALNRIGRVPDYAFWNLSSLVVLHLHNNRI 219
Score = 139 (54.0 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 64/212 (30%), Positives = 91/212 (42%)
Query: 145 LQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKL 204
LQ LG NN + +P A P L + N + + ++F+ L L+ L L+
Sbjct: 256 LQELGFHNNNIRAIPEKAFLG-NPLLQTIHFYDNPIQFVGRSAFQHLPGLHTLSLNGATD 314
Query: 205 MTLSQDC--LAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVP 262
+ D L +L + R RL + L LR L+LSHNL+ G PS +
Sbjct: 315 IQEFPDLRGTTSLESLTLTRAGLQRLPPGMCQQLPRLRV---LELSHNLIEGL--PS-LR 368
Query: 263 RLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 322
L+ + + HN+ VR L L SL N I + +F L +L LDL
Sbjct: 369 GCQKLEEIGLQHNRIWEVRADTFRELTFLRSLDLSWNAIRSIHPEAFSTLRSLVKLDLTG 428
Query: 323 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQ 354
N++ S LA L L L L N RAL+Q
Sbjct: 429 NQL---SVLPLAGLGGLVHLKLRGN--RALSQ 455
Score = 135 (52.6 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 47/153 (30%), Positives = 77/153 (50%)
Query: 115 LEGVT-LHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRL 173
L G T L L ++ L+ + G L L+ L L +NL+ +P+ L L+ +
Sbjct: 321 LRGTTSLESLTLTRAGLQRLPPGMCQQLPR-LRVLELSHNLIEGLPS--LRG-CQKLEEI 376
Query: 174 DLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVV 233
L HN+++++ +F+ L+ L LDLS+N + ++ + + L +L L L GN+L+V +
Sbjct: 377 GLQHNRIWEVRADTFRELTFLRSLDLSWNAIRSIHPEAFSTLRSLVKLDLTGNQLSVLPL 436
Query: 234 AALQGLRSVTDLDLSHNLLAGPLGPS-TVPRLS 265
A L GL L L N P + PRLS
Sbjct: 437 AGLGGL---VHLKLRGNRALSQAFPKDSFPRLS 466
Score = 128 (50.1 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 36/103 (34%), Positives = 53/103 (51%)
Query: 286 AGLDKLTS-LSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDL 344
AGLD LT+ L N + L F L L L L+ NR+ + G + + LS+L L L
Sbjct: 59 AGLDPLTAYLDLSMNSLTELWPGVFHHLRFLEELRLSGNRLAHIPGQAFSGLSSLKILML 118
Query: 345 SHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTM 387
+N L + + + L LQ LRLD N IS+ P+ + G ++
Sbjct: 119 QNNRLGGIPAEALWELPGLQSLRLDANLISLVPDRSFEGLTSL 161
Score = 60 (26.2 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L +L+ +++A N+ V A L L L H+N+I L HSF +
Sbjct: 182 LRALQAVTLALNRIGRVPDYAFWNLSSLVVLHLHNNRIRHLGAHSFEGL 230
Score = 56 (24.8 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
L L+VL ++HN + +L G KL + HN+I
Sbjct: 348 LPRLRVLELSHNLIEGLP--SLRGCQKLEEIGLQHNRI 383
Score = 51 (23.0 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
LSSL VL + +N+ + + GL L +L + NQ+
Sbjct: 206 LSSLVVLHLHNNRIRHLGAHSFEGLQNLETLDLNCNQL 243
Score = 50 (22.7 bits), Expect = 4.8e-15, Sum P(2) = 4.8e-15
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 632 SRYVKLQATTIL-LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL 684
+R +++A T L+ L+ L ++ N S+ A + L L L NQ+ VL
Sbjct: 381 NRIWEVRADTFRELTFLRSLDLSWNAIRSIHPEAFSTLRSLVKLDLTGNQLSVL 434
Score = 49 (22.3 bits), Expect = 6.0e-15, Sum P(2) = 6.0e-15
Identities = 10/14 (71%), Positives = 11/14 (78%)
Query: 663 GALAGLDKLTSLSC 676
GALAG + LT LSC
Sbjct: 598 GALAGANALTGLSC 611
Score = 49 (22.3 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 10/14 (71%), Positives = 11/14 (78%)
Query: 283 GALAGLDKLTSLSC 296
GALAG + LT LSC
Sbjct: 598 GALAGANALTGLSC 611
Score = 48 (22.0 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L+SL+ L + N + + AL+ L L +++ N+I + D++F N+
Sbjct: 158 LTSLRHLWLDDNALTEIPVRALSHLRALQAVTLALNRIGRVPDYAFWNL 206
Score = 47 (21.6 bits), Expect = 9.8e-15, Sum P(2) = 9.8e-15
Identities = 13/46 (28%), Positives = 20/46 (43%)
Query: 647 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L+ + + HN+ VR L L SL N I + +FS +
Sbjct: 373 LEEIGLQHNRIWEVRADTFRELTFLRSLDLSWNAIRSIHPEAFSTL 418
Score = 45 (20.9 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
L +L+ L + NQ A+ L +L L H+N I + + +F
Sbjct: 230 LQNLETLDLNCNQLHEFPV-AIQTLGRLQELGFHNNNIRAIPEKAF 274
Score = 37 (18.1 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 14/37 (37%), Positives = 17/37 (45%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQ 680
L SL L + NQ S + LAGL L L N+
Sbjct: 418 LRSLVKLDLTGNQLSVL---PLAGLGGLVHLKLRGNR 451
>UNIPROTKB|Q9BXB1 [details] [associations]
symbol:LGR4 "Leucine-rich repeat-containing G-protein
coupled receptor 4" species:9606 "Homo sapiens" [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030539 "male genitalia
development" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0050673 "epithelial cell proliferation" evidence=IEA]
[GO:0061290 "canonical Wnt receptor signaling pathway involved in
metanephric kidney development" evidence=IEA] [GO:0072202 "cell
differentiation involved in metanephros development" evidence=IEA]
[GO:0072224 "metanephric glomerulus development" evidence=IEA]
[GO:0072282 "metanephric nephron tubule morphogenesis"
evidence=IEA] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0004930 "G-protein coupled
receptor activity" evidence=TAS] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 InterPro:IPR017452
Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373 PROSITE:PS00237
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886
GO:GO:0045892 GO:GO:0045893 EMBL:CH471064 GO:GO:0004930
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030539
GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 GO:GO:0061290 GO:GO:0072282
EMBL:AF346711 EMBL:AF346709 EMBL:AF346710 EMBL:AF257182
EMBL:AC090597 IPI:IPI00217954 RefSeq:NP_060960.2 UniGene:Hs.502176
ProteinModelPortal:Q9BXB1 SMR:Q9BXB1 DIP:DIP-59894N STRING:Q9BXB1
PhosphoSite:Q9BXB1 DMDM:212286375 PaxDb:Q9BXB1 PRIDE:Q9BXB1
DNASU:55366 Ensembl:ENST00000379214 GeneID:55366 KEGG:hsa:55366
UCSC:uc001mrj.4 CTD:55366 GeneCards:GC11M027345 H-InvDB:HIX0009517
HGNC:HGNC:13299 HPA:HPA030267 MIM:606666 neXtProt:NX_Q9BXB1
PharmGKB:PA28893 HOVERGEN:HBG031675 InParanoid:Q9BXB1 KO:K04309
OMA:DGYWSDC OrthoDB:EOG476JZH ChiTaRS:LGR4 GenomeRNAi:55366
NextBio:59753 ArrayExpress:Q9BXB1 Bgee:Q9BXB1 CleanEx:HS_LGR4
Genevestigator:Q9BXB1 GermOnline:ENSG00000205213 GO:GO:0072202
GO:GO:0072224 Uniprot:Q9BXB1
Length = 951
Score = 225 (84.3 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 77/258 (29%), Positives = 115/258 (44%)
Query: 140 GLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDL 199
GLS+ QAL + N ++ +P A P L+ L L+ N L + + GL L L L
Sbjct: 54 GLSAFTQALDISMNNITQLPEDAFKNF-PFLEELQLAGNDLSFIHPKALSGLKELKVLTL 112
Query: 200 SYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAG-PLGP 258
N+L T+ + + L L+ LRL N +T + +GL + L L N L P+ P
Sbjct: 113 QNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPVHP 172
Query: 259 STVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHL 318
+ L +L+ L++A N+ SS+ A L L L H+N+I L H F L L L
Sbjct: 173 --LSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIRSLSQHCFDGLDNLETL 230
Query: 319 DLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPE 378
DL +N + A A L +L L N + + L+ + L DN +S
Sbjct: 231 DLNYNNLGEFPQAIKA-LPSLKELGFHSNSISVIPDGAFDGNPLLRTIHLYDNPLSFVGN 289
Query: 379 CIYVGFNTMDLE-LIYSG 395
+ N DL L+ G
Sbjct: 290 SAF--HNLSDLHSLVIRG 305
Score = 222 (83.2 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 89/315 (28%), Positives = 135/315 (42%)
Query: 64 CACDLPHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLP-GKFLEGVTLHG 122
C+CD + C+ L A+ E L LD +++N+T LP F L
Sbjct: 33 CSCDGDRRVDCSGK--GLTAVPEGLSAF-----TQALDISMNNITQLPEDAFKNFPFLEE 85
Query: 123 LVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYK 182
L ++ +L I A GL L+ L L NN L VP+ A+ L+ L L L N +
Sbjct: 86 LQLAGNDLSFIHPKALSGLKE-LKVLTLQNNQLKTVPSEAIRGLSA-LQSLRLDANHITS 143
Query: 183 LENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSV 242
+ SF+GL L L L N L + L+ L TL+ L L N+++ A L S+
Sbjct: 144 VPEDSFEGLVQLRHLWLDDNSLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSL 203
Query: 243 TDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID 302
L L +N + L L +L+ L + +N + A+ L L L H N I
Sbjct: 204 VVLHLHNNKIRS-LSQHCFDGLDNLETLDLNYNNLGEFPQ-AIKALPSLKELGFHSNSIS 261
Query: 303 VLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKS 362
V+ D +F L + L N + V ++ +LS+L +L + + +L T
Sbjct: 262 VIPDGAFDGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASMVQQFPNL-TGTVH 320
Query: 363 LQELRLDDNDISMEP 377
L+ L L IS P
Sbjct: 321 LESLTLTGTKISSIP 335
Score = 182 (69.1 bits), Expect = 5.0e-09, Sum P(2) = 5.0e-09
Identities = 87/324 (26%), Positives = 135/324 (41%)
Query: 71 TLRCTANKSDLYAISE-SLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGE 129
+LR AN + ++ E S GL + L D +L+ V V P L TL L ++ +
Sbjct: 133 SLRLDANH--ITSVPEDSFEGLVQLRHLWLDDNSLTEVPVHPLSNLP--TLQALTLALNK 188
Query: 130 LKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFK 189
+ +I D AF LSS L L L NN + + L NL+ LDL++N L + + K
Sbjct: 189 ISSIPDFAFTNLSS-LVVLHLHNNKIRSLSQHCFDGL-DNLETLDLNYNNLGEFPQ-AIK 245
Query: 190 GLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSH 249
L SL L N + + LR + L N L+ +A L +DL H
Sbjct: 246 ALPSLKELGFHSNSISVIPDGAFDGNPLLRTIHLYDNPLSFVGNSAFHNL---SDL---H 299
Query: 250 NL-LAGPLGPSTVPRLSS---LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLE 305
+L + G P L+ L+ L++ + SS+ L +L +N I L
Sbjct: 300 SLVIRGASMVQQFPNLTGTVHLESLTLTGTKISSIPNNLCQEQKMLRTLDLSYNNIRDLP 359
Query: 306 DHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQE 365
SF L + L N+I + + L +L LDLS N + + L +
Sbjct: 360 --SFNGCHALEEISLQRNQIYQIKEGTFQGLISLRILDLSRNLIHEIHSRAFATLGPITN 417
Query: 366 LRLDDNDISMEPECIYVGFNTMDL 389
L + N+++ P G N + L
Sbjct: 418 LDVSFNELTSFPTEGLNGLNQLKL 441
Score = 166 (63.5 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 58/204 (28%), Positives = 97/204 (47%)
Query: 219 RVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFS 278
+ L + N +T A + + +L L+ N L+ + P + L LKVL++ +NQ
Sbjct: 60 QALDISMNNITQLPEDAFKNFPFLEELQLAGNDLSF-IHPKALSGLKELKVLTLQNNQLK 118
Query: 279 SVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSN 338
+V A+ GL L SL N I + + SF L L HL L N + V L++L
Sbjct: 119 TVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPVHPLSNLPT 178
Query: 339 LTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI-SMEPECIYVGFNTMD-LELIYS-- 394
L L L+ N + ++ T L SL L L +N I S+ C + G + ++ L+L Y+
Sbjct: 179 LQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIRSLSQHC-FDGLDNLETLDLNYNNL 237
Query: 395 GVWRHSTLLIPVMLSLCTRSSVVT 418
G + + +P + L S+ ++
Sbjct: 238 GEFPQAIKALPSLKELGFHSNSIS 261
Score = 158 (60.7 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 67/273 (24%), Positives = 120/273 (43%)
Query: 100 LDCTLSNVTVLPG-KFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVV 158
L L+ ++ +P F +L L + + +++++S F GL + L+ L L N L
Sbjct: 182 LTLALNKISSIPDFAFTNLSSLVVLHLHNNKIRSLSQHCFDGLDN-LETLDLNYNNLGEF 240
Query: 159 PTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTL 218
P A+ L P+L L N + + + +F G L + L N L + L L
Sbjct: 241 P-QAIKAL-PSLKELGFHSNSISVIPDGAFDGNPLLRTIHLYDNPLSFVGNSAFHNLSDL 298
Query: 219 RVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFS 278
L ++G + V L G + L L+ ++ + + L+ L +++N
Sbjct: 299 HSLVIRGASM-VQQFPNLTGTVHLESLTLTGTKISS-IPNNLCQEQKMLRTLDLSYNNIR 356
Query: 279 SVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSN 338
+ + G L +S NQI +++ +F+ L +L LDL+ N I + + A L
Sbjct: 357 DLP--SFNGCHALEEISLQRNQIYQIKEGTFQGLISLRILDLSRNLIHEIHSRAFATLGP 414
Query: 339 LTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
+T LD+S N L + + L L +L+L N
Sbjct: 415 ITNLDVSFNELTSFPTE---GLNGLNQLKLVGN 444
Score = 56 (24.8 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 12/47 (25%), Positives = 22/47 (46%)
Query: 646 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
+L+ +S+ NQ ++ G GL L L N I + +F+ +
Sbjct: 366 ALEEISLQRNQIYQIKEGTFQGLISLRILDLSRNLIHEIHSRAFATL 412
Score = 43 (20.2 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 11/47 (23%), Positives = 23/47 (48%)
Query: 647 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNVI 693
L+ L +++N + + G L +S NQI +++ +F +I
Sbjct: 345 LRTLDLSYNNIRDLP--SFNGCHALEEISLQRNQIYQIKEGTFQGLI 389
Score = 37 (18.1 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 503 KNTNCSRPWVSLKQLPWSPKYQVCATLG 530
K ++ +V+L+ L YQ CA G
Sbjct: 448 KEALAAKDFVNLRSLSVPYAYQCCAFWG 475
>UNIPROTKB|E1BX56 [details] [associations]
symbol:LRRTM1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007610 "behavior" evidence=IEA] [GO:0030424
"axon" evidence=IEA] [GO:0030426 "growth cone" evidence=IEA]
[GO:0035418 "protein localization to synapse" evidence=IEA]
[GO:0050808 "synapse organization" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005783 GO:GO:0007610 GO:GO:0030424
InterPro:IPR003591 SMART:SM00369 GO:GO:0050808 GO:GO:0030426
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0035418
GeneTree:ENSGT00700000104056 CTD:347730 KO:K16665 OMA:EPDLFHG
EMBL:AADN02014722 IPI:IPI00599810 RefSeq:XP_001233729.1
ProteinModelPortal:E1BX56 Ensembl:ENSGALT00000025729 GeneID:771502
KEGG:gga:771502 NextBio:20921702 Uniprot:E1BX56
Length = 521
Score = 234 (87.4 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 79/273 (28%), Positives = 123/273 (45%)
Query: 99 LLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVV 158
LL C N+T +P + L G+ GL + L + DG F GL L L L +N + V
Sbjct: 49 LLYCESLNLTEMP-RNLSGMM--GLSLRYNSLSELHDGQFTGLMQ-LTWLYLDHNHICSV 104
Query: 159 PTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTL 218
+A L + L LS N++ +L N +F+ + +L +DLSYN L +L D L L
Sbjct: 105 EGNAFQKLR-RVKELTLSSNKITQLPNNTFRPMPNLRSVDLSYNNLQSLEPDLFHGLRKL 163
Query: 219 RVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFS 278
L ++ N + V Q RS+ LD+ +N L L ++ L L L + HN
Sbjct: 164 TTLHMRSNAIKFVPVRIFQDCRSLKFLDIGYNQLKS-LARNSFAGLFKLTELHLEHNDLV 222
Query: 279 SVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSN 338
V L L SL N++ ++ + + + L LDL+ N I + + +
Sbjct: 223 KVNLAHFPRLISLHSLCLRRNKVTIVVN-TLDWIWQLEKLDLSGNEIEYIEPHVFESVPH 281
Query: 339 LTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
L +L L N L + ++ KSL + L N
Sbjct: 282 LKSLQLDSNRLTYIDSRILDSWKSLTSISLSAN 314
Score = 215 (80.7 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 71/233 (30%), Positives = 105/233 (45%)
Query: 143 SPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYN 202
S + L L N LS + L L L L HN + +E +F+ L + L LS N
Sbjct: 65 SGMMGLSLRYNSLSELHDGQFTGLM-QLTWLYLDHNHICSVEGNAFQKLRRVKELTLSSN 123
Query: 203 KLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVP 262
K+ L + P+ LR + L N L GLR +T L + N + P +
Sbjct: 124 KITQLPNNTFRPMPNLRSVDLSYNNLQSLEPDLFHGLRKLTTLHMRSNAIK--FVPVRIF 181
Query: 263 R-LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 321
+ SLK L I +NQ S+ R + AGL KLT L HN + + F L +L L L
Sbjct: 182 QDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNLAHFPRLISLHSLCLR 241
Query: 322 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 374
N++ V +L + L LDLS N + + + + L+ L+LD N ++
Sbjct: 242 RNKVTIVVN-TLDWIWQLEKLDLSGNEIEYIEPHVFESVPHLKSLQLDSNRLT 293
Score = 172 (65.6 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 56/187 (29%), Positives = 86/187 (45%)
Query: 189 KGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLS 248
+ LS + L L YN L L L+ L L L N + A Q LR V +L LS
Sbjct: 62 RNLSGMMGLSLRYNSLSELHDGQFTGLMQLTWLYLDHNHICSVEGNAFQKLRRVKELTLS 121
Query: 249 HNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHS 308
N + L +T + +L+ + +++N S+ GL KLT+L N I +
Sbjct: 122 SNKIT-QLPNNTFRPMPNLRSVDLSYNNLQSLEPDLFHGLRKLTTLHMRSNAIKFVPVRI 180
Query: 309 FRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRL 368
F+ +L LD+ +N++ +++ S A L LT L L HN L + L SL L L
Sbjct: 181 FQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNLAHFPRLISLHSLCL 240
Query: 369 DDNDISM 375
N +++
Sbjct: 241 RRNKVTI 247
Score = 168 (64.2 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 60/208 (28%), Positives = 94/208 (45%)
Query: 96 RVSLLDCTLSNVTVLPGK-FLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNL 154
RV L + + +T LP F L + +S L+++ F GL L L + +N
Sbjct: 114 RVKELTLSSNKITQLPNNTFRPMPNLRSVDLSYNNLQSLEPDLFHGLRK-LTTLHMRSNA 172
Query: 155 LSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAP 214
+ VP +L LD+ +NQL L SF GL L L L +N L+ ++
Sbjct: 173 IKFVPVRIFQDCR-SLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNLAHFPR 231
Query: 215 LVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAH 274
L++L L L+ N++T+ VV L + + LDLS N + + P + LK L +
Sbjct: 232 LISLHSLCLRRNKVTI-VVNTLDWIWQLEKLDLSGNEIEY-IEPHVFESVPHLKSLQLDS 289
Query: 275 NQFSSVRRGALAGLDKLTSLSCHHNQID 302
N+ + + L LTS+S N D
Sbjct: 290 NRLTYIDSRILDSWKSLTSISLSANTWD 317
Score = 165 (63.1 bits), Expect = 5.2e-13, Sum P(2) = 5.2e-13
Identities = 42/127 (33%), Positives = 67/127 (52%)
Query: 256 LGPSTVPR-LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALST 314
L + +PR LS + LS+ +N S + G GL +LT L HN I +E ++F+ L
Sbjct: 55 LNLTEMPRNLSGMMGLSLRYNSLSELHDGQFTGLMQLTWLYLDHNHICSVEGNAFQKLRR 114
Query: 315 LSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 374
+ L L+ N+I + + + NL ++DLS+N L++L DL L+ L L + N I
Sbjct: 115 VKELTLSSNKITQLPNNTFRPMPNLRSVDLSYNNLQSLEPDLFHGLRKLTTLHMRSNAIK 174
Query: 375 MEPECIY 381
P I+
Sbjct: 175 FVPVRIF 181
Score = 86 (35.3 bits), Expect = 5.2e-13, Sum P(2) = 5.2e-13
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 646 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
SLK L I +NQ S+ R + AGL KLT L HN +
Sbjct: 186 SLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDL 221
Score = 46 (21.3 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L SL L + N+ + V L + +L L N+I+ +E H F +V
Sbjct: 232 LISLHSLCLRRNKVTIVVN-TLDWIWQLEKLDLSGNEIEYIEPHVFESV 279
Score = 37 (18.1 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 663 GALAGLDKLTSLSCHHNQI 681
GAL +++ S SCH +
Sbjct: 498 GALVIINEYGSCSCHQQPV 516
Score = 37 (18.1 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 283 GALAGLDKLTSLSCHHNQI 301
GAL +++ S SCH +
Sbjct: 498 GALVIINEYGSCSCHQQPV 516
>UNIPROTKB|A6QLV3 [details] [associations]
symbol:SHOC2 "Leucine-rich repeat protein SHOC-2"
species:9913 "Bos taurus" [GO:0019903 "protein phosphatase binding"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0000164 "protein phosphatase type 1
complex" evidence=ISS] [GO:0046579 "positive regulation of Ras
protein signal transduction" evidence=ISS] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR027036 PROSITE:PS51450 GO:GO:0005634
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875
Pfam:PF12799 GO:GO:0046579 GO:GO:0019903 GO:GO:0000164
HOGENOM:HOG000116557 GeneTree:ENSGT00600000084236 EMBL:BC148097
IPI:IPI00729412 RefSeq:NP_001095413.1 UniGene:Bt.72530
ProteinModelPortal:A6QLV3 PRIDE:A6QLV3 Ensembl:ENSBTAT00000010138
GeneID:511417 KEGG:bta:511417 CTD:8036 HOVERGEN:HBG055661
InParanoid:A6QLV3 OMA:LPHGIGN OrthoDB:EOG408N7W NextBio:20869918
ArrayExpress:A6QLV3 PANTHER:PTHR23155:SF38 Uniprot:A6QLV3
Length = 582
Score = 226 (84.6 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 93/332 (28%), Positives = 155/332 (46%)
Query: 69 PHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSG 128
P+ T KS + + L +E LD + ++ +LP E L L + S
Sbjct: 75 PNPAPGTRKKSSNAEVIKELNKCR-EENSMRLDLSKRSIHILPSSIKELTQLTELYLYSN 133
Query: 129 ELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSF 188
+L+++ A +G L L L N L+ +P S L L L LDL HN+L ++ + +
Sbjct: 134 KLQSLP--AEVGCLVNLMTLALSENSLTSLPDS-LDNLK-KLRMLDLRHNKLREIPSVVY 189
Query: 189 KGLSSLNFLDLSYNKLMTLSQDC--LAPLVTL-----RVLRLQG------NRLTVSVVA- 234
+ L SL L L +N++ T+ +D L+ L L ++ +L N +T+ V
Sbjct: 190 R-LDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHN 248
Query: 235 ALQGL-------RSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAG 287
L+ L +T+LDL HN L P T+ LSSL L + +N+ S++ R +LA
Sbjct: 249 QLEHLPKEIGNCTQITNLDLQHNELLDL--PDTIGNLSSLSRLGLRYNRLSAIPR-SLAK 305
Query: 288 LDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN--RIVAVSGASLAHLSNLTTLDLS 345
L L+ +N I L + +L L+ L LA N ++ V G S S + +L++
Sbjct: 306 CSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPS--QFSTIYSLNME 363
Query: 346 HNFLRALTQDLITPLKSLQELRLDDNDISMEP 377
HN + + + + K L +L + DN ++ P
Sbjct: 364 HNRINKIPFGIFSRAKVLSKLNMKDNQLTSLP 395
Score = 212 (79.7 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 74/232 (31%), Positives = 118/232 (50%)
Query: 143 SPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHN--QLYKLENTS-FKGLSSLNFLDL 199
S L+ L L NN +S +P S L+ L L+ L L+ N QLY + S F + SLN +
Sbjct: 307 SALEELNLENNNISTLPESLLSSLV-KLNSLTLARNCFQLYPVGGPSQFSTIYSLN---M 362
Query: 200 SYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPS 259
+N++ + + L L ++ N+LT S+ S+ +L+L+ N L P
Sbjct: 363 EHNRINKIPFGIFSRAKVLSKLNMKDNQLT-SLPLDFGTWTSMVELNLATNQLTKI--PE 419
Query: 260 TVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 319
V L SL+VL +++N + G L L KL L N+++ L + L L L
Sbjct: 420 DVSGLVSLEVLILSNNLLKKLPHG-LGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLV 477
Query: 320 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
L +N++ + + HL+NLT L L N L L +++ T L++L+EL L+DN
Sbjct: 478 LTNNQLTTLP-RGIGHLTNLTHLGLGENLLTHLPEEIGT-LENLEELYLNDN 527
Score = 186 (70.5 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 71/233 (30%), Positives = 116/233 (49%)
Query: 148 LGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTL 207
L L + ++P+S + L L L L N+L L L +L L LS N L +L
Sbjct: 105 LDLSKRSIHILPSS-IKELT-QLTELYLYSNKLQSLP-AEVGCLVNLMTLALSENSLTSL 161
Query: 208 SQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSL 267
D L L LR+L L+ N+L + + + L S+T L L N + + LS L
Sbjct: 162 P-DSLDNLKKLRMLDLRHNKLR-EIPSVVYRLDSLTTLYLRFNRITTV--EKDIKNLSKL 217
Query: 268 KVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVA 327
+LSI N+ + + L L +L HNQ++ L + +++LDL HN ++
Sbjct: 218 SMLSIRENKIKQLP-AEIGELCNLITLDVAHNQLEHLPKEIGNC-TQITNLDLQHNELLD 275
Query: 328 VSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECI 380
+ ++ +LS+L+ L L +N L A+ + L +L+EL L++N+IS PE +
Sbjct: 276 LPD-TIGNLSSLSRLGLRYNRLSAIPRSL-AKCSALEELNLENNNISTLPESL 326
Score = 183 (69.5 bits), Expect = 8.5e-11, Sum P(2) = 8.5e-11
Identities = 84/316 (26%), Positives = 147/316 (46%)
Query: 68 LPHTLRCTANKSDLYAISESLRGLEPDE---RVSLLDCTLS--NVTVLPGKFLEGVTLHG 122
LP +++ ++LY S L+ L P E V+L+ LS ++T LP L
Sbjct: 115 LPSSIKELTQLTELYLYSNKLQSL-PAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRM 173
Query: 123 LVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYK 182
L + +L+ I + L S L L L N ++ V + L+ L L + N++ +
Sbjct: 174 LDLRHNKLREIPSVVY-RLDS-LTTLYLRFNRITTVEKD-IKNLS-KLSMLSIRENKIKQ 229
Query: 183 LENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSV 242
L L +L LD+++N+L L ++ + + L LQ N L + + + L S+
Sbjct: 230 LP-AEIGELCNLITLDVAHNQLEHLPKE-IGNCTQITNLDLQHNEL-LDLPDTIGNLSSL 286
Query: 243 TDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID 302
+ L L +N L+ P ++ + S+L+ L++ +N S++ L+ L KL SL+ N
Sbjct: 287 SRLGLRYNRLSAI--PRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQ 344
Query: 303 VLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKS 362
+ ST+ L++ HNRI + + L+ L++ N L +L D T S
Sbjct: 345 LYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGT-WTS 403
Query: 363 LQELRLDDNDISMEPE 378
+ EL L N ++ PE
Sbjct: 404 MVELNLATNQLTKIPE 419
Score = 55 (24.4 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 19/72 (26%), Positives = 35/72 (48%)
Query: 619 AQQEDDINRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHH 678
A +E ++ NN + L ++ + L+SL ++A N F G + + SL+ H
Sbjct: 308 ALEELNLENNNISTLPESLLSSLVKLNSL---TLARNCFQLYPVGGPSQFSTIYSLNMEH 364
Query: 679 NQIDVLEDHSFS 690
N+I+ + FS
Sbjct: 365 NRINKIPFGIFS 376
Score = 47 (21.6 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 18/66 (27%), Positives = 30/66 (45%)
Query: 621 QEDDINRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQ 680
+E D+ N +S L L L+ L + +NQ +++ RG + L LT L N
Sbjct: 451 RELDLEENKLES----LPNEIAYLKDLQKLVLTNNQLTTLPRG-IGHLTNLTHLGLGENL 505
Query: 681 IDVLED 686
+ L +
Sbjct: 506 LTHLPE 511
Score = 43 (20.2 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 10/40 (25%), Positives = 21/40 (52%)
Query: 645 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL 684
S++ L++ HN+ + + G + L+ L+ NQ+ L
Sbjct: 355 STIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSL 394
Score = 37 (18.1 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 470 LGTVQVYVQLWTNYDPNC-LLTITLYIDGDVIVQKNTNC 507
+GT++ +L+ N +PN L L + + + NC
Sbjct: 513 IGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENC 551
>UNIPROTKB|Q9UQ13 [details] [associations]
symbol:SHOC2 "Leucine-rich repeat protein SHOC-2"
species:9606 "Homo sapiens" [GO:0008543 "fibroblast growth factor
receptor signaling pathway" evidence=NAS] [GO:0005737 "cytoplasm"
evidence=IDA;NAS] [GO:0007265 "Ras protein signal transduction"
evidence=NAS] [GO:0019888 "protein phosphatase regulator activity"
evidence=TAS] [GO:0019903 "protein phosphatase binding"
evidence=IDA] [GO:0046579 "positive regulation of Ras protein
signal transduction" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0000164 "protein phosphatase type 1 complex"
evidence=IDA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027036
PROSITE:PS51450 GO:GO:0005634 GO:GO:0008543 GO:GO:0007265
GO:GO:0019888 EMBL:CH471066 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 EMBL:AL158163 InterPro:IPR025875 Pfam:PF12799
GO:GO:0046579 GO:GO:0019903 GO:GO:0000164 HOGENOM:HOG000116557
CTD:8036 HOVERGEN:HBG055661 OMA:LPHGIGN OrthoDB:EOG408N7W
PANTHER:PTHR23155:SF38 EMBL:AF068920 EMBL:AF054828 EMBL:AB020669
EMBL:AK090820 EMBL:AK292833 EMBL:BC050445 IPI:IPI00298928
IPI:IPI00479890 RefSeq:NP_001255968.1 RefSeq:NP_031399.2
UniGene:Hs.104315 ProteinModelPortal:Q9UQ13 SMR:Q9UQ13
IntAct:Q9UQ13 STRING:Q9UQ13 PhosphoSite:Q9UQ13 DMDM:14423936
PaxDb:Q9UQ13 PeptideAtlas:Q9UQ13 PRIDE:Q9UQ13
Ensembl:ENST00000265277 Ensembl:ENST00000369452
Ensembl:ENST00000451838 GeneID:8036 KEGG:hsa:8036 UCSC:uc001kzl.4
UCSC:uc001kzn.3 GeneCards:GC10P112679 HGNC:HGNC:15454 HPA:HPA009164
MIM:602775 MIM:607721 neXtProt:NX_Q9UQ13 Orphanet:2701
PharmGKB:PA37960 InParanoid:Q9UQ13 PhylomeDB:Q9UQ13 ChiTaRS:SHOC2
GenomeRNAi:8036 NextBio:30623 Bgee:Q9UQ13 CleanEx:HS_SHOC2
Genevestigator:Q9UQ13 GermOnline:ENSG00000108061 Uniprot:Q9UQ13
Length = 582
Score = 226 (84.6 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 93/332 (28%), Positives = 155/332 (46%)
Query: 69 PHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSG 128
P+ T KS + + L +E LD + ++ +LP E L L + S
Sbjct: 75 PNPAPGTRKKSSNAEVIKELNKCR-EENSMRLDLSKRSIHILPSSIKELTQLTELYLYSN 133
Query: 129 ELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSF 188
+L+++ A +G L L L N L+ +P S L L L LDL HN+L ++ + +
Sbjct: 134 KLQSLP--AEVGCLVNLMTLALSENSLTSLPDS-LDNLK-KLRMLDLRHNKLREIPSVVY 189
Query: 189 KGLSSLNFLDLSYNKLMTLSQDC--LAPLVTL-----RVLRLQG------NRLTVSVVA- 234
+ L SL L L +N++ T+ +D L+ L L ++ +L N +T+ V
Sbjct: 190 R-LDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHN 248
Query: 235 ALQGL-------RSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAG 287
L+ L +T+LDL HN L P T+ LSSL L + +N+ S++ R +LA
Sbjct: 249 QLEHLPKEIGNCTQITNLDLQHNELLDL--PDTIGNLSSLSRLGLRYNRLSAIPR-SLAK 305
Query: 288 LDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN--RIVAVSGASLAHLSNLTTLDLS 345
L L+ +N I L + +L L+ L LA N ++ V G S S + +L++
Sbjct: 306 CSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPS--QFSTIYSLNME 363
Query: 346 HNFLRALTQDLITPLKSLQELRLDDNDISMEP 377
HN + + + + K L +L + DN ++ P
Sbjct: 364 HNRINKIPFGIFSRAKVLSKLNMKDNQLTSLP 395
Score = 212 (79.7 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 74/232 (31%), Positives = 118/232 (50%)
Query: 143 SPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHN--QLYKLENTS-FKGLSSLNFLDL 199
S L+ L L NN +S +P S L+ L L+ L L+ N QLY + S F + SLN +
Sbjct: 307 SALEELNLENNNISTLPESLLSSLV-KLNSLTLARNCFQLYPVGGPSQFSTIYSLN---M 362
Query: 200 SYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPS 259
+N++ + + L L ++ N+LT S+ S+ +L+L+ N L P
Sbjct: 363 EHNRINKIPFGIFSRAKVLSKLNMKDNQLT-SLPLDFGTWTSMVELNLATNQLTKI--PE 419
Query: 260 TVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 319
V L SL+VL +++N + G L L KL L N+++ L + L L L
Sbjct: 420 DVSGLVSLEVLILSNNLLKKLPHG-LGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLV 477
Query: 320 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
L +N++ + + HL+NLT L L N L L +++ T L++L+EL L+DN
Sbjct: 478 LTNNQLTTLP-RGIGHLTNLTHLGLGENLLTHLPEEIGT-LENLEELYLNDN 527
Score = 186 (70.5 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 71/233 (30%), Positives = 116/233 (49%)
Query: 148 LGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTL 207
L L + ++P+S + L L L L N+L L L +L L LS N L +L
Sbjct: 105 LDLSKRSIHILPSS-IKELT-QLTELYLYSNKLQSLP-AEVGCLVNLMTLALSENSLTSL 161
Query: 208 SQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSL 267
D L L LR+L L+ N+L + + + L S+T L L N + + LS L
Sbjct: 162 P-DSLDNLKKLRMLDLRHNKLR-EIPSVVYRLDSLTTLYLRFNRITTV--EKDIKNLSKL 217
Query: 268 KVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVA 327
+LSI N+ + + L L +L HNQ++ L + +++LDL HN ++
Sbjct: 218 SMLSIRENKIKQLP-AEIGELCNLITLDVAHNQLEHLPKEIGNC-TQITNLDLQHNELLD 275
Query: 328 VSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECI 380
+ ++ +LS+L+ L L +N L A+ + L +L+EL L++N+IS PE +
Sbjct: 276 LPD-TIGNLSSLSRLGLRYNRLSAIPRSL-AKCSALEELNLENNNISTLPESL 326
Score = 183 (69.5 bits), Expect = 8.5e-11, Sum P(2) = 8.5e-11
Identities = 84/316 (26%), Positives = 147/316 (46%)
Query: 68 LPHTLRCTANKSDLYAISESLRGLEPDE---RVSLLDCTLS--NVTVLPGKFLEGVTLHG 122
LP +++ ++LY S L+ L P E V+L+ LS ++T LP L
Sbjct: 115 LPSSIKELTQLTELYLYSNKLQSL-PAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRM 173
Query: 123 LVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYK 182
L + +L+ I + L S L L L N ++ V + L+ L L + N++ +
Sbjct: 174 LDLRHNKLREIPSVVY-RLDS-LTTLYLRFNRITTVEKD-IKNLS-KLSMLSIRENKIKQ 229
Query: 183 LENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSV 242
L L +L LD+++N+L L ++ + + L LQ N L + + + L S+
Sbjct: 230 LP-AEIGELCNLITLDVAHNQLEHLPKE-IGNCTQITNLDLQHNEL-LDLPDTIGNLSSL 286
Query: 243 TDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID 302
+ L L +N L+ P ++ + S+L+ L++ +N S++ L+ L KL SL+ N
Sbjct: 287 SRLGLRYNRLSAI--PRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQ 344
Query: 303 VLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKS 362
+ ST+ L++ HNRI + + L+ L++ N L +L D T S
Sbjct: 345 LYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGT-WTS 403
Query: 363 LQELRLDDNDISMEPE 378
+ EL L N ++ PE
Sbjct: 404 MVELNLATNQLTKIPE 419
Score = 55 (24.4 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 19/72 (26%), Positives = 35/72 (48%)
Query: 619 AQQEDDINRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHH 678
A +E ++ NN + L ++ + L+SL ++A N F G + + SL+ H
Sbjct: 308 ALEELNLENNNISTLPESLLSSLVKLNSL---TLARNCFQLYPVGGPSQFSTIYSLNMEH 364
Query: 679 NQIDVLEDHSFS 690
N+I+ + FS
Sbjct: 365 NRINKIPFGIFS 376
Score = 47 (21.6 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 18/66 (27%), Positives = 30/66 (45%)
Query: 621 QEDDINRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQ 680
+E D+ N +S L L L+ L + +NQ +++ RG + L LT L N
Sbjct: 451 RELDLEENKLES----LPNEIAYLKDLQKLVLTNNQLTTLPRG-IGHLTNLTHLGLGENL 505
Query: 681 IDVLED 686
+ L +
Sbjct: 506 LTHLPE 511
Score = 43 (20.2 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 10/40 (25%), Positives = 21/40 (52%)
Query: 645 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL 684
S++ L++ HN+ + + G + L+ L+ NQ+ L
Sbjct: 355 STIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSL 394
Score = 37 (18.1 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 470 LGTVQVYVQLWTNYDPNC-LLTITLYIDGDVIVQKNTNC 507
+GT++ +L+ N +PN L L + + + NC
Sbjct: 513 IGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENC 551
>UNIPROTKB|F2Z5G0 [details] [associations]
symbol:SHOC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046579 "positive regulation of Ras protein signal
transduction" evidence=IEA] [GO:0019903 "protein phosphatase
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000164 "protein phosphatase type 1 complex" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027036 PROSITE:PS51450
GO:GO:0005634 InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875
Pfam:PF12799 GO:GO:0046579 GO:GO:0000164
GeneTree:ENSGT00600000084236 CTD:8036 OMA:LPHGIGN
PANTHER:PTHR23155:SF38 EMBL:CT737336 RefSeq:XP_001927528.1
UniGene:Ssc.83770 ProteinModelPortal:F2Z5G0 SMR:F2Z5G0 PRIDE:F2Z5G0
Ensembl:ENSSSCT00000011624 GeneID:100155918 KEGG:ssc:100155918
Uniprot:F2Z5G0
Length = 582
Score = 226 (84.6 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 93/332 (28%), Positives = 155/332 (46%)
Query: 69 PHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSG 128
P+ T KS + + L +E LD + ++ +LP E L L + S
Sbjct: 75 PNPAPGTRKKSSNAEVIKELNKCR-EENSMRLDLSKRSIHILPSSIKELTQLTELYLYSN 133
Query: 129 ELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSF 188
+L+++ A +G L L L N L+ +P S L L L LDL HN+L ++ + +
Sbjct: 134 KLQSLP--AEVGCLVNLMTLALSENSLTSLPDS-LDNLK-KLRMLDLRHNKLREIPSVVY 189
Query: 189 KGLSSLNFLDLSYNKLMTLSQDC--LAPLVTL-----RVLRLQG------NRLTVSVVA- 234
+ L SL L L +N++ T+ +D L+ L L ++ +L N +T+ V
Sbjct: 190 R-LDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHN 248
Query: 235 ALQGL-------RSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAG 287
L+ L +T+LDL HN L P T+ LSSL L + +N+ S++ R +LA
Sbjct: 249 QLEHLPKEIGNCTQITNLDLQHNELLDL--PDTIGNLSSLSRLGLRYNRLSAIPR-SLAK 305
Query: 288 LDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN--RIVAVSGASLAHLSNLTTLDLS 345
L L+ +N I L + +L L+ L LA N ++ V G S S + +L++
Sbjct: 306 CSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPS--QFSTIYSLNME 363
Query: 346 HNFLRALTQDLITPLKSLQELRLDDNDISMEP 377
HN + + + + K L +L + DN ++ P
Sbjct: 364 HNRINKIPFGIFSRAKVLSKLNMKDNQLTSLP 395
Score = 212 (79.7 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 74/232 (31%), Positives = 118/232 (50%)
Query: 143 SPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHN--QLYKLENTS-FKGLSSLNFLDL 199
S L+ L L NN +S +P S L+ L L+ L L+ N QLY + S F + SLN +
Sbjct: 307 SALEELNLENNNISTLPESLLSSLV-KLNSLTLARNCFQLYPVGGPSQFSTIYSLN---M 362
Query: 200 SYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPS 259
+N++ + + L L ++ N+LT S+ S+ +L+L+ N L P
Sbjct: 363 EHNRINKIPFGIFSRAKVLSKLNMKDNQLT-SLPLDFGTWTSMVELNLATNQLTKI--PE 419
Query: 260 TVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 319
V L SL+VL +++N + G L L KL L N+++ L + L L L
Sbjct: 420 DVSGLVSLEVLILSNNLLKKLPHG-LGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLV 477
Query: 320 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
L +N++ + + HL+NLT L L N L L +++ T L++L+EL L+DN
Sbjct: 478 LTNNQLTTLP-RGIGHLTNLTHLGLGENLLTHLPEEIGT-LENLEELYLNDN 527
Score = 186 (70.5 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 71/233 (30%), Positives = 116/233 (49%)
Query: 148 LGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTL 207
L L + ++P+S + L L L L N+L L L +L L LS N L +L
Sbjct: 105 LDLSKRSIHILPSS-IKELT-QLTELYLYSNKLQSLP-AEVGCLVNLMTLALSENSLTSL 161
Query: 208 SQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSL 267
D L L LR+L L+ N+L + + + L S+T L L N + + LS L
Sbjct: 162 P-DSLDNLKKLRMLDLRHNKLR-EIPSVVYRLDSLTTLYLRFNRITTV--EKDIKNLSKL 217
Query: 268 KVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVA 327
+LSI N+ + + L L +L HNQ++ L + +++LDL HN ++
Sbjct: 218 SMLSIRENKIKQLP-AEIGELCNLITLDVAHNQLEHLPKEIGNC-TQITNLDLQHNELLD 275
Query: 328 VSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECI 380
+ ++ +LS+L+ L L +N L A+ + L +L+EL L++N+IS PE +
Sbjct: 276 LPD-TIGNLSSLSRLGLRYNRLSAIPRSL-AKCSALEELNLENNNISTLPESL 326
Score = 183 (69.5 bits), Expect = 8.5e-11, Sum P(2) = 8.5e-11
Identities = 84/316 (26%), Positives = 147/316 (46%)
Query: 68 LPHTLRCTANKSDLYAISESLRGLEPDE---RVSLLDCTLS--NVTVLPGKFLEGVTLHG 122
LP +++ ++LY S L+ L P E V+L+ LS ++T LP L
Sbjct: 115 LPSSIKELTQLTELYLYSNKLQSL-PAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRM 173
Query: 123 LVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYK 182
L + +L+ I + L S L L L N ++ V + L+ L L + N++ +
Sbjct: 174 LDLRHNKLREIPSVVY-RLDS-LTTLYLRFNRITTVEKD-IKNLS-KLSMLSIRENKIKQ 229
Query: 183 LENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSV 242
L L +L LD+++N+L L ++ + + L LQ N L + + + L S+
Sbjct: 230 LP-AEIGELCNLITLDVAHNQLEHLPKE-IGNCTQITNLDLQHNEL-LDLPDTIGNLSSL 286
Query: 243 TDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID 302
+ L L +N L+ P ++ + S+L+ L++ +N S++ L+ L KL SL+ N
Sbjct: 287 SRLGLRYNRLSAI--PRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQ 344
Query: 303 VLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKS 362
+ ST+ L++ HNRI + + L+ L++ N L +L D T S
Sbjct: 345 LYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGT-WTS 403
Query: 363 LQELRLDDNDISMEPE 378
+ EL L N ++ PE
Sbjct: 404 MVELNLATNQLTKIPE 419
Score = 55 (24.4 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 19/72 (26%), Positives = 35/72 (48%)
Query: 619 AQQEDDINRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHH 678
A +E ++ NN + L ++ + L+SL ++A N F G + + SL+ H
Sbjct: 308 ALEELNLENNNISTLPESLLSSLVKLNSL---TLARNCFQLYPVGGPSQFSTIYSLNMEH 364
Query: 679 NQIDVLEDHSFS 690
N+I+ + FS
Sbjct: 365 NRINKIPFGIFS 376
Score = 47 (21.6 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 18/66 (27%), Positives = 30/66 (45%)
Query: 621 QEDDINRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQ 680
+E D+ N +S L L L+ L + +NQ +++ RG + L LT L N
Sbjct: 451 RELDLEENKLES----LPNEIAYLKDLQKLVLTNNQLTTLPRG-IGHLTNLTHLGLGENL 505
Query: 681 IDVLED 686
+ L +
Sbjct: 506 LTHLPE 511
Score = 43 (20.2 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 10/40 (25%), Positives = 21/40 (52%)
Query: 645 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL 684
S++ L++ HN+ + + G + L+ L+ NQ+ L
Sbjct: 355 STIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSL 394
Score = 37 (18.1 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 470 LGTVQVYVQLWTNYDPNC-LLTITLYIDGDVIVQKNTNC 507
+GT++ +L+ N +PN L L + + + NC
Sbjct: 513 IGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENC 551
>UNIPROTKB|Q5RAV5 [details] [associations]
symbol:SHOC2 "Leucine-rich repeat protein SHOC-2"
species:9601 "Pongo abelii" [GO:0000164 "protein phosphatase type 1
complex" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0019903 "protein
phosphatase binding" evidence=ISS] [GO:0046579 "positive regulation
of Ras protein signal transduction" evidence=ISS] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR027036 PROSITE:PS51450 GO:GO:0005634
InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
GO:GO:0046579 GO:GO:0019903 GO:GO:0000164 HSSP:P07359
HOGENOM:HOG000116557 GeneTree:ENSGT00600000084236 CTD:8036
HOVERGEN:HBG055661 OMA:LPHGIGN PANTHER:PTHR23155:SF38 EMBL:CR858906
EMBL:CR860532 EMBL:CR860795 EMBL:CR861437 RefSeq:NP_001126707.1
RefSeq:NP_001128872.1 UniGene:Pab.17963 UniGene:Pab.19685
ProteinModelPortal:Q5RAV5 SMR:Q5RAV5 PRIDE:Q5RAV5
Ensembl:ENSPPYT00000003192 GeneID:100173707 GeneID:100189801
KEGG:pon:100173707 KEGG:pon:100189801 InParanoid:Q5R5R1
Uniprot:Q5RAV5
Length = 582
Score = 226 (84.6 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 93/332 (28%), Positives = 155/332 (46%)
Query: 69 PHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSG 128
P+ T KS + + L +E LD + ++ +LP E L L + S
Sbjct: 75 PNPAPGTRKKSSNAEVIKELNKCR-EENSMRLDLSKRSIHILPSSIKELTQLTELYLYSN 133
Query: 129 ELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSF 188
+L+++ A +G L L L N L+ +P S L L L LDL HN+L ++ + +
Sbjct: 134 KLQSLP--AEVGCLVNLMTLALSENSLTSLPDS-LDNLK-KLRMLDLRHNKLREIPSVVY 189
Query: 189 KGLSSLNFLDLSYNKLMTLSQDC--LAPLVTL-----RVLRLQG------NRLTVSVVA- 234
+ L SL L L +N++ T+ +D L+ L L ++ +L N +T+ V
Sbjct: 190 R-LDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHN 248
Query: 235 ALQGL-------RSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAG 287
L+ L +T+LDL HN L P T+ LSSL L + +N+ S++ R +LA
Sbjct: 249 QLEHLPKEIGNCTQITNLDLQHNELLDL--PDTIGNLSSLSRLGLRYNRLSAIPR-SLAK 305
Query: 288 LDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN--RIVAVSGASLAHLSNLTTLDLS 345
L L+ +N I L + +L L+ L LA N ++ V G S S + +L++
Sbjct: 306 CSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPS--QFSTIYSLNME 363
Query: 346 HNFLRALTQDLITPLKSLQELRLDDNDISMEP 377
HN + + + + K L +L + DN ++ P
Sbjct: 364 HNRINKIPFGIFSRAKVLSKLNMKDNQLTSLP 395
Score = 212 (79.7 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 74/232 (31%), Positives = 118/232 (50%)
Query: 143 SPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHN--QLYKLENTS-FKGLSSLNFLDL 199
S L+ L L NN +S +P S L+ L L+ L L+ N QLY + S F + SLN +
Sbjct: 307 SALEELNLENNNISTLPESLLSSLV-KLNSLTLARNCFQLYPVGGPSQFSTIYSLN---M 362
Query: 200 SYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPS 259
+N++ + + L L ++ N+LT S+ S+ +L+L+ N L P
Sbjct: 363 EHNRINKIPFGIFSRAKVLSKLNMKDNQLT-SLPLDFGTWTSMVELNLATNQLTKI--PE 419
Query: 260 TVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 319
V L SL+VL +++N + G L L KL L N+++ L + L L L
Sbjct: 420 DVSGLVSLEVLILSNNLLKKLPHG-LGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLV 477
Query: 320 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
L +N++ + + HL+NLT L L N L L +++ T L++L+EL L+DN
Sbjct: 478 LTNNQLTTLP-RGIGHLTNLTHLGLGENLLTHLPEEIGT-LENLEELYLNDN 527
Score = 186 (70.5 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 71/233 (30%), Positives = 116/233 (49%)
Query: 148 LGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTL 207
L L + ++P+S + L L L L N+L L L +L L LS N L +L
Sbjct: 105 LDLSKRSIHILPSS-IKELT-QLTELYLYSNKLQSLP-AEVGCLVNLMTLALSENSLTSL 161
Query: 208 SQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSL 267
D L L LR+L L+ N+L + + + L S+T L L N + + LS L
Sbjct: 162 P-DSLDNLKKLRMLDLRHNKLR-EIPSVVYRLDSLTTLYLRFNRITTV--EKDIKNLSKL 217
Query: 268 KVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVA 327
+LSI N+ + + L L +L HNQ++ L + +++LDL HN ++
Sbjct: 218 SMLSIRENKIKQLP-AEIGELCNLITLDVAHNQLEHLPKEIGNC-TQITNLDLQHNELLD 275
Query: 328 VSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECI 380
+ ++ +LS+L+ L L +N L A+ + L +L+EL L++N+IS PE +
Sbjct: 276 LPD-TIGNLSSLSRLGLRYNRLSAIPRSL-AKCSALEELNLENNNISTLPESL 326
Score = 183 (69.5 bits), Expect = 8.5e-11, Sum P(2) = 8.5e-11
Identities = 84/316 (26%), Positives = 147/316 (46%)
Query: 68 LPHTLRCTANKSDLYAISESLRGLEPDE---RVSLLDCTLS--NVTVLPGKFLEGVTLHG 122
LP +++ ++LY S L+ L P E V+L+ LS ++T LP L
Sbjct: 115 LPSSIKELTQLTELYLYSNKLQSL-PAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRM 173
Query: 123 LVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYK 182
L + +L+ I + L S L L L N ++ V + L+ L L + N++ +
Sbjct: 174 LDLRHNKLREIPSVVY-RLDS-LTTLYLRFNRITTVEKD-IKNLS-KLSMLSIRENKIKQ 229
Query: 183 LENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSV 242
L L +L LD+++N+L L ++ + + L LQ N L + + + L S+
Sbjct: 230 LP-AEIGELCNLITLDVAHNQLEHLPKE-IGNCTQITNLDLQHNEL-LDLPDTIGNLSSL 286
Query: 243 TDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID 302
+ L L +N L+ P ++ + S+L+ L++ +N S++ L+ L KL SL+ N
Sbjct: 287 SRLGLRYNRLSAI--PRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQ 344
Query: 303 VLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKS 362
+ ST+ L++ HNRI + + L+ L++ N L +L D T S
Sbjct: 345 LYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGT-WTS 403
Query: 363 LQELRLDDNDISMEPE 378
+ EL L N ++ PE
Sbjct: 404 MVELNLATNQLTKIPE 419
Score = 55 (24.4 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 19/72 (26%), Positives = 35/72 (48%)
Query: 619 AQQEDDINRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHH 678
A +E ++ NN + L ++ + L+SL ++A N F G + + SL+ H
Sbjct: 308 ALEELNLENNNISTLPESLLSSLVKLNSL---TLARNCFQLYPVGGPSQFSTIYSLNMEH 364
Query: 679 NQIDVLEDHSFS 690
N+I+ + FS
Sbjct: 365 NRINKIPFGIFS 376
Score = 47 (21.6 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 18/66 (27%), Positives = 30/66 (45%)
Query: 621 QEDDINRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQ 680
+E D+ N +S L L L+ L + +NQ +++ RG + L LT L N
Sbjct: 451 RELDLEENKLES----LPNEIAYLKDLQKLVLTNNQLTTLPRG-IGHLTNLTHLGLGENL 505
Query: 681 IDVLED 686
+ L +
Sbjct: 506 LTHLPE 511
Score = 43 (20.2 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 10/40 (25%), Positives = 21/40 (52%)
Query: 645 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL 684
S++ L++ HN+ + + G + L+ L+ NQ+ L
Sbjct: 355 STIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSL 394
Score = 37 (18.1 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 470 LGTVQVYVQLWTNYDPNC-LLTITLYIDGDVIVQKNTNC 507
+GT++ +L+ N +PN L L + + + NC
Sbjct: 513 IGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENC 551
>ZFIN|ZDB-GENE-080327-15 [details] [associations]
symbol:lrrtm4l1 "leucine rich repeat transmembrane
neuronal 4 like 1" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IDA] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-080327-15 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0042802 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00700000104056 EMBL:BX005125
EMBL:BX293550 IPI:IPI00876741 Ensembl:ENSDART00000113737
Bgee:F1QVN0 Uniprot:F1QVN0
Length = 571
Score = 227 (85.0 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 91/309 (29%), Positives = 134/309 (43%)
Query: 65 ACD--LPHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHG 122
ACD L L A+ L++ E + ++ C S +P V+ G
Sbjct: 5 ACDMRLAGLLLLQASSLLLFSSGERMCPYSCHCEGKIVHCESSAFQDVPENI--SVSCQG 62
Query: 123 LVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYK 182
L + +L + F L+ L L L +N + V + A + L L LS N++ +
Sbjct: 63 LSLRYNDLHTMLPYQFAHLNQLLW-LYLDHNQIMFVDSRAFQGVR-RLKELILSSNRISQ 120
Query: 183 LENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSV 242
L N +F G+ +L LDLSYNKL L L L+ L L+ N LT V A RS+
Sbjct: 121 LHNVTFHGVPNLRSLDLSYNKLQELQPGQFYGLRKLQNLHLRSNGLTAIPVRAFLECRSL 180
Query: 243 TDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID 302
LDL +N L L + LS L L + HNQFS + L L +L N+I
Sbjct: 181 EFLDLGYNRLR-VLTRTAFLGLSRLMELHLEHNQFSRINFFLFPRLANLRALYLQWNRIR 239
Query: 303 VLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKS 362
+ + TL LD++ N I + L NL L+L N L ++Q+++ S
Sbjct: 240 AVNQGLPWSWYTLQRLDISGNEIQVLDPVVFQCLPNLQVLNLESNKLANVSQEVVAAWIS 299
Query: 363 LQELRLDDN 371
L + L N
Sbjct: 300 LTTISLAGN 308
Score = 205 (77.2 bits), Expect = 4.1e-13, P = 4.1e-13
Identities = 89/319 (27%), Positives = 140/319 (43%)
Query: 141 LSSPLQALGLP-NNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDL 199
+S Q L L N+L +++P A L L L L HNQ+ +++ +F+G+ L L L
Sbjct: 56 ISVSCQGLSLRYNDLHTMLPYQ-FAHLNQLL-WLYLDHNQIMFVDSRAFQGVRRLKELIL 113
Query: 200 SYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDL-SHNLLAGPLGP 258
S N++ L + LR L L N+L GLR + +L L S+ L A P+
Sbjct: 114 SSNRISQLHNVTFHGVPNLRSLDLSYNKLQELQPGQFYGLRKLQNLHLRSNGLTAIPVRA 173
Query: 259 STVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHL 318
R SL+ L + +N+ + R A GL +L L HNQ + F L+ L L
Sbjct: 174 FLECR--SLEFLDLGYNRLRVLTRTAFLGLSRLMELHLEHNQFSRINFFLFPRLANLRAL 231
Query: 319 DLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN---DISM 375
L NRI AV+ L LD+S N ++ L + L +LQ L L+ N ++S
Sbjct: 232 YLQWNRIRAVNQGLPWSWYTLQRLDISGNEIQVLDPVVFQCLPNLQVLNLESNKLANVSQ 291
Query: 376 EPECIYVGFNTMDLELIYSGVWRHSTLLIPVMLSLCTRSSVVTRYRYCVVL--IEGSNIL 433
E ++ T+ L +W + P+++ L C ++G ++
Sbjct: 292 EVVAAWISLTTISLA---GNMWDCGPGICPLVVWLKNFRGTKDTNIICSSPKHLQGEKVI 348
Query: 434 DQSALVLGCS--EILALVP 450
+ S + C EI A P
Sbjct: 349 EASKNYIDCDDYEITAQSP 367
Score = 142 (55.0 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 62/253 (24%), Positives = 117/253 (46%)
Query: 266 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 325
S + LS+ +N ++ A L++L L HNQI ++ +F+ + L L L+ NRI
Sbjct: 59 SCQGLSLRYNDLHTMLPYQFAHLNQLLWLYLDHNQIMFVDSRAFQGVRRLKELILSSNRI 118
Query: 326 VAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFN 385
+ + + NL +LDLS+N L+ L L+ LQ L L N ++ P ++
Sbjct: 119 SQLHNVTFHGVPNLRSLDLSYNKLQELQPGQFYGLRKLQNLHLRSNGLTAIPVRAFLECR 178
Query: 386 TMD-LELIYSGV---WRHSTLLIPVMLSLCTRSSVVTRYRYCVVLIEGSNILDQSALVLG 441
+++ L+L Y+ + R + L + ++ L + +R + + + + AL L
Sbjct: 179 SLEFLDLGYNRLRVLTRTAFLGLSRLMELHLEHNQFSRINFFLF----PRLANLRALYLQ 234
Query: 442 CSEILALVPTLTSQPLSYVTSLRANVTGLGTVQVYVQLWTNYDPNCLLTITLYIDGDVIV 501
+ I A+ L P S+ T R +++G +QV + PN L + L ++ + +
Sbjct: 235 WNRIRAVNQGL---PWSWYTLQRLDISG-NEIQVLDPVVFQCLPN--LQV-LNLESNKLA 287
Query: 502 QKNTNCSRPWVSL 514
+ W+SL
Sbjct: 288 NVSQEVVAAWISL 300
>UNIPROTKB|Q14392 [details] [associations]
symbol:LRRC32 "Leucine-rich repeat-containing protein 32"
species:9606 "Homo sapiens" [GO:0010628 "positive regulation of
gene expression" evidence=IEA] [GO:0046007 "negative regulation of
activated T cell proliferation" evidence=IEA] [GO:0050710 "negative
regulation of cytokine secretion" evidence=IEA] [GO:0005887
"integral to plasma membrane" evidence=TAS] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005887 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GO:GO:0010628 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0046007 GO:GO:0050710 EMBL:Z24680
EMBL:BC052210 EMBL:BC070079 IPI:IPI00030280 PIR:S42799
RefSeq:NP_001122394.1 RefSeq:NP_005503.1 UniGene:Hs.151641
ProteinModelPortal:Q14392 SMR:Q14392 DIP:DIP-48932N STRING:Q14392
PhosphoSite:Q14392 DMDM:2498405 PaxDb:Q14392 PRIDE:Q14392
Ensembl:ENST00000260061 Ensembl:ENST00000404995
Ensembl:ENST00000407242 GeneID:2615 KEGG:hsa:2615 UCSC:uc001oxq.4
CTD:2615 GeneCards:GC11M076368 H-InvDB:HIX0036396 HGNC:HGNC:4161
MIM:137207 neXtProt:NX_Q14392 PharmGKB:PA28574 HOGENOM:HOG000113368
HOVERGEN:HBG052348 InParanoid:Q14392 OMA:CCGNGWL OrthoDB:EOG4DBTF0
PhylomeDB:Q14392 ChiTaRS:LRRC32 GenomeRNAi:2615 NextBio:10297
ArrayExpress:Q14392 Bgee:Q14392 CleanEx:HS_LRRC32
Genevestigator:Q14392 GermOnline:ENSG00000137507 Uniprot:Q14392
Length = 662
Score = 219 (82.2 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 74/231 (32%), Positives = 104/231 (45%)
Query: 166 LAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQG 225
L P+ + LDLS NQL + + ++L LDLS N++ L L L L L
Sbjct: 47 LPPDTETLDLSGNQLRSILASPLGFYTALRHLDLSTNEISFLQPGAFQALTHLEHLSLAH 106
Query: 226 NRLTVSVVAALQGLRS---VTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRR 282
NRL ++ + GL VT LDLS N L L + SL LS+A N + + R
Sbjct: 107 NRLAMATALSAGGLGPLPRVTSLDLSGNSLYSGLLERLLGEAPSLHTLSLAENSLTRLTR 166
Query: 283 GALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTL 342
+ L L H N + +ED +F L L+HL+L+ N + +S SL L L
Sbjct: 167 HTFRDMPALEQLDLHSNVLMDIEDGAFEGLPRLTHLNLSRNSLTCISDFSL---QQLRVL 223
Query: 343 DLSHNFLRALTQDLITPLKSLQELRLD--DN------DISMEPECIYVGFN 385
DLS N + A Q P Q LD +N D++ P IY+ +
Sbjct: 224 DLSCNSIEAF-QTASQPQAEFQLTWLDLRENKLLHFPDLAALPRLIYLNLS 273
Score = 189 (71.6 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 89/299 (29%), Positives = 139/299 (46%)
Query: 83 AISESLRGLEPDERVSLLDCTLSNV-TVLPGKFL-EGVTLHGLVISSGELKNISDGAFIG 140
A + S GL P RV+ LD + +++ + L + L E +LH L ++ L ++ F
Sbjct: 112 ATALSAGGLGPLPRVTSLDLSGNSLYSGLLERLLGEAPSLHTLSLAENSLTRLTRHTFRD 171
Query: 141 LSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLS 200
+ + L+ L L +N+L + A L P L L+LS N L + + S L L LDLS
Sbjct: 172 MPA-LEQLDLHSNVLMDIEDGAFEGL-PRLTHLNLSRNSLTCISDFS---LQQLRVLDLS 226
Query: 201 YNKLMTLSQDCLAPLVTLRV--LRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGP 258
N + Q P ++ L L+ N+L L L + L+LS+NL+ P GP
Sbjct: 227 CNSIEAF-QTASQPQAEFQLTWLDLRENKLLH--FPDLAALPRLIYLNLSNNLIRLPTGP 283
Query: 259 STVPRLSSLKVLSIAHNQFSSVRRGALAG------LDKLTSLSCHHNQIDVLEDHSFRAL 312
P+ S K + +S++ A +G L +L +L +N+I+++ D L
Sbjct: 284 ---PQDS--KGIHAPSEGWSALPLSAPSGNASGRPLSQLLNLDLSYNEIELIPDSFLEHL 338
Query: 313 STLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
++L L+L+ N + L L L LDLSHN L L L SL+ L L N
Sbjct: 339 TSLCFLNLSRNCLRTFEARRLGSLPCLMLLDLSHNALETLELGA-RALGSLRTLLLQGN 396
Score = 162 (62.1 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 85/266 (31%), Positives = 115/266 (43%)
Query: 120 LHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQ 179
L L +S E++ I D L+S L L L N L L L P L LDLSHN
Sbjct: 317 LLNLDLSYNEIELIPDSFLEHLTS-LCFLNLSRNCLRTFEARRLGSL-PCLMLLDLSHNA 374
Query: 180 LYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTV--------- 230
L LE + L SL L L N L L A L +L+ L LQGNR++
Sbjct: 375 LETLE-LGARALGSLRTLLLQGNALRDLPPYTFANLASLQRLNLQGNRVSPCGGPDEPGP 433
Query: 231 SVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLD- 289
S A G+ S+ L L N + L + + L L ++ N V GAL GL+
Sbjct: 434 SGCVAFSGITSLRSLSLVDNEIE--LLRAGAFLHTPLTELDLSSNPGLEVATGALGGLEA 491
Query: 290 KLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFL 349
L L+ N + VL+ L L+LA NR+ + + A +L LDL +N
Sbjct: 492 SLEVLALQGNGLMVLQV-DLPCFICLKRLNLAENRLSHLPAWTQA--VSLEVLDLRNNSF 548
Query: 350 RALTQDLITPLK-SLQELRLDDNDIS 374
L + L+ SL+ L L N +S
Sbjct: 549 SLLPGSAMGGLETSLRRLYLQGNPLS 574
Score = 158 (60.7 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 88/300 (29%), Positives = 129/300 (43%)
Query: 91 LEPD-ERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALG 149
L PD E + L L ++ P F L L +S+ E+ + GAF L+ L+ L
Sbjct: 47 LPPDTETLDLSGNQLRSILASPLGFY--TALRHLDLSTNEISFLQPGAFQALTH-LEHLS 103
Query: 150 LPNNLLSVVPT-SA--LAPLAPNLDRLDLSHNQLYK-LENTSFKGLSSLNFLDLSYNKLM 205
L +N L++ SA L PL P + LDLS N LY L SL+ L L+ N L
Sbjct: 104 LAHNRLAMATALSAGGLGPL-PRVTSLDLSGNSLYSGLLERLLGEAPSLHTLSLAENSLT 162
Query: 206 TLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLS 265
L++ + L L L N L A +GL +T L+LS N L S L
Sbjct: 163 RLTRHTFRDMPALEQLDLHSNVLMDIEDGAFEGLPRLTHLNLSRNSLTCISDFS----LQ 218
Query: 266 SLKVLSIAHNQFSSVRRGALAGLD-KLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 324
L+VL ++ N + + + + +LT L N++ L AL L +L+L++N
Sbjct: 219 QLRVLDLSCNSIEAFQTASQPQAEFQLTWLDLRENKL--LHFPDLAALPRLIYLNLSNNL 276
Query: 325 IVAVSGASL------AHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPE 378
I +G A + L LS A + PL L L L N+I + P+
Sbjct: 277 IRLPTGPPQDSKGIHAPSEGWSALPLSAPSGNASGR----PLSQLLNLDLSYNEIELIPD 332
Score = 142 (55.0 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 80/280 (28%), Positives = 118/280 (42%)
Query: 100 LDCTLSNVTVL-PGKFLEGVTLHGLVISSGELKN---ISDGAFIGLSSPLQALGLPNNLL 155
LD + + ++ L PG F L L ++ L +S G +G + +L L N L
Sbjct: 78 LDLSTNEISFLQPGAFQALTHLEHLSLAHNRLAMATALSAGG-LGPLPRVTSLDLSGNSL 136
Query: 156 SVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPL 215
L AP+L L L+ N L +L +F+ + +L LDL N LM + L
Sbjct: 137 YSGLLERLLGEAPSLHTLSLAENSLTRLTRHTFRDMPALEQLDLHSNVLMDIEDGAFEGL 196
Query: 216 VTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLS-SLKVLSIAH 274
L L L N LT +LQ LR LDLS N + ++ P+ L L +
Sbjct: 197 PRLTHLNLSRNSLTCISDFSLQQLRV---LDLSCNSIEA-FQTASQPQAEFQLTWLDLRE 252
Query: 275 NQFSSVRRGALAGLDKLTSLSCHHNQIDVLED--HSFRALSTLSHLDLAHNRIVAVSG-A 331
N+ + LA L +L L+ +N I + + + S + + A SG A
Sbjct: 253 NKL--LHFPDLAALPRLIYLNLSNNLIRLPTGPPQDSKGIHAPSE-GWSALPLSAPSGNA 309
Query: 332 SLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
S LS L LDLS+N + + + L SL L L N
Sbjct: 310 SGRPLSQLLNLDLSYNEIELIPDSFLEHLTSLCFLNLSRN 349
Score = 115 (45.5 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 92/323 (28%), Positives = 137/323 (42%)
Query: 70 HTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVT-LHGLVISSG 128
HTL N S + R + E++ L L ++ G F EG+ L L +S
Sbjct: 152 HTLSLAEN-SLTRLTRHTFRDMPALEQLDLHSNVLMDIE--DGAF-EGLPRLTHLNLSRN 207
Query: 129 ELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSF 188
L ISD + L+ L L N + T++ L LDL N+L L
Sbjct: 208 SLTCISDFSL----QQLRVLDLSCNSIEAFQTASQPQAEFQLTWLDLRENKL--LHFPDL 261
Query: 189 KGLSSLNFLDLSYN--KLMT-LSQDCL---APLVTLRVLRLQGNRLTVSVVAALQGLRSV 242
L L +L+LS N +L T QD AP L L S A+ + L +
Sbjct: 262 AALPRLIYLNLSNNLIRLPTGPPQDSKGIHAPSEGWSALPLSAP----SGNASGRPLSQL 317
Query: 243 TDLDLSHNLLAGPLGP-STVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 301
+LDLS+N + L P S + L+SL L+++ N + L L L L HN +
Sbjct: 318 LNLDLSYNEIE--LIPDSFLEHLTSLCFLNLSRNCLRTFEARRLGSLPCLMLLDLSHNAL 375
Query: 302 DVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALT-QDLITP- 359
+ LE + RAL +L L L N + + + A+L++L L+L N + D P
Sbjct: 376 ETLELGA-RALGSLRTLLLQGNALRDLPPYTFANLASLQRLNLQGNRVSPCGGPDEPGPS 434
Query: 360 -------LKSLQELRLDDNDISM 375
+ SL+ L L DN+I +
Sbjct: 435 GCVAFSGITSLRSLSLVDNEIEL 457
Score = 56 (24.8 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 628 NNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSL 674
N +++R L A T +S L+VL + +N FS + A+ GL+ TSL
Sbjct: 520 NLAENRLSHLPAWTQAVS-LEVLDLRNNSFSLLPGSAMGGLE--TSL 563
Score = 56 (24.8 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L +L ++HN ++ GA A L L +L N + L ++F+N+
Sbjct: 362 LPCLMLLDLSHNALETLELGARA-LGSLRTLLLQGNALRDLPPYTFANL 409
Score = 52 (23.4 bits), Expect = 4.4e-15, Sum P(2) = 4.4e-15
Identities = 18/56 (32%), Positives = 27/56 (48%)
Query: 631 DSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLD-KLTSLSCHHNQIDVLE 685
D+ L+A L + L L ++ N V GAL GL+ L L+ N + VL+
Sbjct: 452 DNEIELLRAGAFLHTPLTELDLSSNPGLEVATGALGGLEASLEVLALQGNGLMVLQ 507
Score = 48 (22.0 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLE 685
L+SL L+++ N + L L L L HN ++ LE
Sbjct: 338 LTSLCFLNLSRNCLRTFEARRLGSLPCLMLLDLSHNALETLE 379
Score = 44 (20.5 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 664 ALAGLDKLTSLSCHHNQIDVLEDHSF 689
A +G+ L SLS N+I++L +F
Sbjct: 438 AFSGITSLRSLSLVDNEIELLRAGAF 463
>UNIPROTKB|E2R260 [details] [associations]
symbol:SHOC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046579 "positive regulation of Ras protein
signal transduction" evidence=IEA] [GO:0019903 "protein phosphatase
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000164 "protein phosphatase type 1 complex" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027036 PROSITE:PS51450
GO:GO:0005634 InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875
Pfam:PF12799 GO:GO:0046579 GO:GO:0000164
GeneTree:ENSGT00600000084236 CTD:8036 OMA:LPHGIGN
PANTHER:PTHR23155:SF38 EMBL:AAEX03015529 RefSeq:XP_535013.2
ProteinModelPortal:E2R260 Ensembl:ENSCAFT00000017230 GeneID:477819
KEGG:cfa:477819 NextBio:20853238 Uniprot:E2R260
Length = 582
Score = 225 (84.3 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 93/332 (28%), Positives = 155/332 (46%)
Query: 69 PHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSG 128
P+ T KS + + L +E LD + ++ +LP E L L + S
Sbjct: 75 PNPAPGTRKKSSNAEVIKELNKCR-EENSMRLDLSKRSIHILPSSIKELTQLTELYLYSN 133
Query: 129 ELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSF 188
+L+++ A +G L L L N L+ +P S L L L LDL HN+L ++ + +
Sbjct: 134 KLQSLP--AEVGCLVNLMTLALNENSLTSLPDS-LDNLK-KLRMLDLRHNKLREIPSVVY 189
Query: 189 KGLSSLNFLDLSYNKLMTLSQDC--LAPLVTL-----RVLRLQG------NRLTVSVVA- 234
+ L SL L L +N++ T+ +D L+ L L ++ +L N +T+ V
Sbjct: 190 R-LDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHN 248
Query: 235 ALQGL-------RSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAG 287
L+ L +T+LDL HN L P T+ LSSL L + +N+ S++ R +LA
Sbjct: 249 QLEHLPKEIGNCTQITNLDLQHNELLDL--PDTIGNLSSLSRLGLRYNRLSAIPR-SLAK 305
Query: 288 LDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN--RIVAVSGASLAHLSNLTTLDLS 345
L L+ +N I L + +L L+ L LA N ++ V G S S + +L++
Sbjct: 306 CSALEELNLENNNISALPESLLSSLVKLNSLTLARNCFQLYPVGGPS--QFSTIYSLNME 363
Query: 346 HNFLRALTQDLITPLKSLQELRLDDNDISMEP 377
HN + + + + K L +L + DN ++ P
Sbjct: 364 HNRINKIPFGIFSRAKVLSKLNMKDNQLTSLP 395
Score = 212 (79.7 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 74/232 (31%), Positives = 118/232 (50%)
Query: 143 SPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHN--QLYKLENTS-FKGLSSLNFLDL 199
S L+ L L NN +S +P S L+ L L+ L L+ N QLY + S F + SLN +
Sbjct: 307 SALEELNLENNNISALPESLLSSLV-KLNSLTLARNCFQLYPVGGPSQFSTIYSLN---M 362
Query: 200 SYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPS 259
+N++ + + L L ++ N+LT S+ S+ +L+L+ N L P
Sbjct: 363 EHNRINKIPFGIFSRAKVLSKLNMKDNQLT-SLPLDFGTWTSMVELNLATNQLTKI--PE 419
Query: 260 TVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 319
V L SL+VL +++N + G L L KL L N+++ L + L L L
Sbjct: 420 DVSGLVSLEVLILSNNLLKKLPHG-LGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLV 477
Query: 320 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
L +N++ + + HL+NLT L L N L L +++ T L++L+EL L+DN
Sbjct: 478 LTNNQLTTLP-RGIGHLTNLTHLGLGENLLTHLPEEIGT-LENLEELYLNDN 527
Score = 183 (69.5 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 70/233 (30%), Positives = 116/233 (49%)
Query: 148 LGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTL 207
L L + ++P+S + L L L L N+L L L +L L L+ N L +L
Sbjct: 105 LDLSKRSIHILPSS-IKELT-QLTELYLYSNKLQSLP-AEVGCLVNLMTLALNENSLTSL 161
Query: 208 SQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSL 267
D L L LR+L L+ N+L + + + L S+T L L N + + LS L
Sbjct: 162 P-DSLDNLKKLRMLDLRHNKLR-EIPSVVYRLDSLTTLYLRFNRITTV--EKDIKNLSKL 217
Query: 268 KVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVA 327
+LSI N+ + + L L +L HNQ++ L + +++LDL HN ++
Sbjct: 218 SMLSIRENKIKQLP-AEIGELCNLITLDVAHNQLEHLPKEIGNC-TQITNLDLQHNELLD 275
Query: 328 VSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECI 380
+ ++ +LS+L+ L L +N L A+ + L +L+EL L++N+IS PE +
Sbjct: 276 LPD-TIGNLSSLSRLGLRYNRLSAIPRSL-AKCSALEELNLENNNISALPESL 326
Score = 180 (68.4 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 83/316 (26%), Positives = 147/316 (46%)
Query: 68 LPHTLRCTANKSDLYAISESLRGLEPDE---RVSLLDCTLS--NVTVLPGKFLEGVTLHG 122
LP +++ ++LY S L+ L P E V+L+ L+ ++T LP L
Sbjct: 115 LPSSIKELTQLTELYLYSNKLQSL-PAEVGCLVNLMTLALNENSLTSLPDSLDNLKKLRM 173
Query: 123 LVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYK 182
L + +L+ I + L S L L L N ++ V + L+ L L + N++ +
Sbjct: 174 LDLRHNKLREIPSVVY-RLDS-LTTLYLRFNRITTVEKD-IKNLS-KLSMLSIRENKIKQ 229
Query: 183 LENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSV 242
L L +L LD+++N+L L ++ + + L LQ N L + + + L S+
Sbjct: 230 LP-AEIGELCNLITLDVAHNQLEHLPKE-IGNCTQITNLDLQHNEL-LDLPDTIGNLSSL 286
Query: 243 TDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID 302
+ L L +N L+ P ++ + S+L+ L++ +N S++ L+ L KL SL+ N
Sbjct: 287 SRLGLRYNRLSAI--PRSLAKCSALEELNLENNNISALPESLLSSLVKLNSLTLARNCFQ 344
Query: 303 VLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKS 362
+ ST+ L++ HNRI + + L+ L++ N L +L D T S
Sbjct: 345 LYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGT-WTS 403
Query: 363 LQELRLDDNDISMEPE 378
+ EL L N ++ PE
Sbjct: 404 MVELNLATNQLTKIPE 419
Score = 55 (24.4 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 19/72 (26%), Positives = 35/72 (48%)
Query: 619 AQQEDDINRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHH 678
A +E ++ NN + L ++ + L+SL ++A N F G + + SL+ H
Sbjct: 308 ALEELNLENNNISALPESLLSSLVKLNSL---TLARNCFQLYPVGGPSQFSTIYSLNMEH 364
Query: 679 NQIDVLEDHSFS 690
N+I+ + FS
Sbjct: 365 NRINKIPFGIFS 376
Score = 47 (21.6 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 18/66 (27%), Positives = 30/66 (45%)
Query: 621 QEDDINRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQ 680
+E D+ N +S L L L+ L + +NQ +++ RG + L LT L N
Sbjct: 451 RELDLEENKLES----LPNEIAYLKDLQKLVLTNNQLTTLPRG-IGHLTNLTHLGLGENL 505
Query: 681 IDVLED 686
+ L +
Sbjct: 506 LTHLPE 511
Score = 43 (20.2 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 10/40 (25%), Positives = 21/40 (52%)
Query: 645 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL 684
S++ L++ HN+ + + G + L+ L+ NQ+ L
Sbjct: 355 STIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSL 394
Score = 37 (18.1 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 470 LGTVQVYVQLWTNYDPNC-LLTITLYIDGDVIVQKNTNC 507
+GT++ +L+ N +PN L L + + + NC
Sbjct: 513 IGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENC 551
>MGI|MGI:1927197 [details] [associations]
symbol:Shoc2 "soc-2 (suppressor of clear) homolog (C.
elegans)" species:10090 "Mus musculus" [GO:0000164 "protein
phosphatase type 1 complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0019903
"protein phosphatase binding" evidence=ISO] [GO:0046579 "positive
regulation of Ras protein signal transduction" evidence=ISO]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027036 PROSITE:PS51450
EMBL:AF068921 MGI:MGI:1927197 GO:GO:0005634 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
GO:GO:0046579 GO:GO:0019903 GO:GO:0000164 HOGENOM:HOG000116557
GeneTree:ENSGT00600000084236 CTD:8036 HOVERGEN:HBG055661
OMA:LPHGIGN OrthoDB:EOG408N7W PANTHER:PTHR23155:SF38 EMBL:DQ479926
EMBL:AK077798 EMBL:AK146447 EMBL:BC013722 EMBL:BC049775
EMBL:BC083060 IPI:IPI00131754 RefSeq:NP_001161977.1
RefSeq:NP_062632.2 UniGene:Mm.228669 ProteinModelPortal:O88520
SMR:O88520 IntAct:O88520 STRING:O88520 PhosphoSite:O88520
PaxDb:O88520 PRIDE:O88520 Ensembl:ENSMUST00000025932
Ensembl:ENSMUST00000169861 GeneID:56392 KEGG:mmu:56392
UCSC:uc008hxg.2 InParanoid:Q91VH8 NextBio:312492 Bgee:O88520
CleanEx:MM_SHOC2 Genevestigator:O88520
GermOnline:ENSMUSG00000024976 Uniprot:O88520
Length = 582
Score = 222 (83.2 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 92/333 (27%), Positives = 155/333 (46%)
Query: 69 PHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSG 128
P+ T KS + + L +E LD + ++ +LP E L L + S
Sbjct: 75 PNPAPGTRKKSSNAEVIKELNKCR-EENSMRLDLSKRSIHILPPSVKELTQLTELYLYSN 133
Query: 129 ELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSF 188
+L+++ A +G L L L N L+ +P S L L L LDL HN+L ++ + +
Sbjct: 134 KLQSLP--AEVGCLVNLMTLALSENSLTSLPDS-LDNLK-KLRMLDLRHNKLREIPSVVY 189
Query: 189 KGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRL--------------TVSVVA 234
+ L SL L L +N++ T+ +D + L L +L ++ N++ T+ V
Sbjct: 190 R-LDSLTTLYLRFNRITTVEKD-IKNLPKLSMLSIRENKIKQLPAEIGELCNLITLDVAH 247
Query: 235 -ALQGL-------RSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALA 286
L+ L +T+LDL HN L P T+ LSSL L + +N+ S++ R +LA
Sbjct: 248 NQLEHLPKEIGNCTQITNLDLQHNDLLDL--PDTIGNLSSLNRLGLRYNRLSAIPR-SLA 304
Query: 287 GLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN--RIVAVSGASLAHLSNLTTLDL 344
L L+ +N I L + +L L+ L LA N ++ V G S S + +L++
Sbjct: 305 KCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPS--QFSTIYSLNM 362
Query: 345 SHNFLRALTQDLITPLKSLQELRLDDNDISMEP 377
HN + + + + K L +L + DN ++ P
Sbjct: 363 EHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLP 395
Score = 210 (79.0 bits), Expect = 9.7e-13, Sum P(2) = 9.7e-13
Identities = 74/232 (31%), Positives = 118/232 (50%)
Query: 143 SPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHN--QLYKLENTS-FKGLSSLNFLDL 199
S L+ L L NN +S +P S L+ L L+ L L+ N QLY + S F + SLN +
Sbjct: 307 SALEELNLENNNISTLPESLLSSLV-KLNSLTLARNCFQLYPVGGPSQFSTIYSLN---M 362
Query: 200 SYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPS 259
+N++ + + L L ++ N+LT S+ S+ +L+L+ N L P
Sbjct: 363 EHNRINKIPFGIFSRAKVLSKLNMKDNQLT-SLPLDFGTWTSMVELNLATNQLTKI--PE 419
Query: 260 TVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 319
V L SL+VL +++N + G L L KL L N+++ L + L L L
Sbjct: 420 DVSGLVSLEVLILSNNLLKKLPHG-LGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLV 477
Query: 320 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
L +N++ + + HL+NLT L L N L L +++ T L++L+EL L+DN
Sbjct: 478 LTNNQLSTLP-RGIGHLTNLTHLGLGENLLTHLPEEIGT-LENLEELYLNDN 527
Score = 184 (69.8 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 85/316 (26%), Positives = 146/316 (46%)
Query: 68 LPHTLRCTANKSDLYAISESLRGLEPDE---RVSLLDCTLS--NVTVLPGKFLEGVTLHG 122
LP +++ ++LY S L+ L P E V+L+ LS ++T LP L
Sbjct: 115 LPPSVKELTQLTELYLYSNKLQSL-PAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRM 173
Query: 123 LVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYK 182
L + +L+ I + L S L L L N ++ V + L P L L + N++ +
Sbjct: 174 LDLRHNKLREIPSVVY-RLDS-LTTLYLRFNRITTVEKD-IKNL-PKLSMLSIRENKIKQ 229
Query: 183 LENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSV 242
L L +L LD+++N+L L ++ + + L LQ N L + + + L S+
Sbjct: 230 LP-AEIGELCNLITLDVAHNQLEHLPKE-IGNCTQITNLDLQHNDL-LDLPDTIGNLSSL 286
Query: 243 TDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID 302
L L +N L+ P ++ + S+L+ L++ +N S++ L+ L KL SL+ N
Sbjct: 287 NRLGLRYNRLSAI--PRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQ 344
Query: 303 VLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKS 362
+ ST+ L++ HNRI + + L+ L++ N L +L D T S
Sbjct: 345 LYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGT-WTS 403
Query: 363 LQELRLDDNDISMEPE 378
+ EL L N ++ PE
Sbjct: 404 MVELNLATNQLTKIPE 419
Score = 175 (66.7 bits), Expect = 9.6e-11, Sum P(2) = 9.6e-11
Identities = 70/233 (30%), Positives = 113/233 (48%)
Query: 148 LGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTL 207
L L + ++P S + L L L L N+L L L +L L LS N L +L
Sbjct: 105 LDLSKRSIHILPPS-VKELT-QLTELYLYSNKLQSLP-AEVGCLVNLMTLALSENSLTSL 161
Query: 208 SQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSL 267
D L L LR+L L+ N+L + + + L S+T L L N + + L L
Sbjct: 162 P-DSLDNLKKLRMLDLRHNKLR-EIPSVVYRLDSLTTLYLRFNRITTV--EKDIKNLPKL 217
Query: 268 KVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVA 327
+LSI N+ + + L L +L HNQ++ L + +++LDL HN ++
Sbjct: 218 SMLSIRENKIKQLP-AEIGELCNLITLDVAHNQLEHLPKEIGNC-TQITNLDLQHNDLLD 275
Query: 328 VSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECI 380
+ ++ +LS+L L L +N L A+ + L +L+EL L++N+IS PE +
Sbjct: 276 LPD-TIGNLSSLNRLGLRYNRLSAIPRSL-AKCSALEELNLENNNISTLPESL 326
Score = 55 (24.4 bits), Expect = 9.6e-11, Sum P(2) = 9.6e-11
Identities = 19/72 (26%), Positives = 35/72 (48%)
Query: 619 AQQEDDINRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHH 678
A +E ++ NN + L ++ + L+SL ++A N F G + + SL+ H
Sbjct: 308 ALEELNLENNNISTLPESLLSSLVKLNSL---TLARNCFQLYPVGGPSQFSTIYSLNMEH 364
Query: 679 NQIDVLEDHSFS 690
N+I+ + FS
Sbjct: 365 NRINKIPFGIFS 376
Score = 50 (22.7 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 19/66 (28%), Positives = 30/66 (45%)
Query: 621 QEDDINRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQ 680
+E D+ N +S L L L+ L + +NQ S++ RG + L LT L N
Sbjct: 451 RELDLEENKLES----LPNEIAYLKDLQKLVLTNNQLSTLPRG-IGHLTNLTHLGLGENL 505
Query: 681 IDVLED 686
+ L +
Sbjct: 506 LTHLPE 511
Score = 43 (20.2 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 10/40 (25%), Positives = 21/40 (52%)
Query: 645 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL 684
S++ L++ HN+ + + G + L+ L+ NQ+ L
Sbjct: 355 STIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSL 394
Score = 37 (18.1 bits), Expect = 4.5e-14, Sum P(2) = 4.5e-14
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 470 LGTVQVYVQLWTNYDPNC-LLTITLYIDGDVIVQKNTNC 507
+GT++ +L+ N +PN L L + + + NC
Sbjct: 513 IGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENC 551
>ZFIN|ZDB-GENE-091116-44 [details] [associations]
symbol:lrrc4bb "leucine rich repeat containing 4Bb"
species:7955 "Danio rerio" [GO:0051965 "positive regulation of
synapse assembly" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026883 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-091116-44 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GeneTree:ENSGT00690000101682
PANTHER:PTHR24369:SF7 EMBL:CU672238 EMBL:CU681836 IPI:IPI00961430
Ensembl:ENSDART00000007208 Uniprot:E7F2A9
Length = 745
Score = 228 (85.3 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 71/231 (30%), Positives = 110/231 (47%)
Query: 141 LSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLS 200
+SS + L L N + V+ + L +L+ L LS NQ+ ++E +F GL +L L+L
Sbjct: 85 ISSNTRYLNLQENSIQVIRSDTFKHLN-HLEILQLSKNQIRQIEVGAFNGLPNLITLELF 143
Query: 201 YNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPST 260
N+L + L LR L L+ N + A + S+ LDL + +
Sbjct: 144 DNRLPLVPSQAFEYLSKLRELWLRNNPIETLPAYAFHRVPSLRRLDLGELRKLSFISEAA 203
Query: 261 VPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 320
L +L+ L++ V L L +L L NQ+ V+ SF+ L +L L L
Sbjct: 204 FEGLLNLRFLNLGMCGLKDVPN--LTPLVRLEELELSGNQLGVVRPGSFQGLVSLRKLWL 261
Query: 321 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
H+RI + + L NL L+LSHN L +L DL TPL+ L+ + L+ N
Sbjct: 262 MHSRISVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLQQLERVHLNHN 312
Score = 193 (73.0 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 76/263 (28%), Positives = 117/263 (44%)
Query: 63 LCACDLPHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVT-LH 121
LC+C R K L + +S+ L+ +++ V+ + + L
Sbjct: 61 LCSCS-NQASRVICTKKSLNEVPQSI-----SSNTRYLNLQENSIQVIRSDTFKHLNHLE 114
Query: 122 GLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLY 181
L +S +++ I GAF GL + L L L +N L +VP+ A L+ L L L +N +
Sbjct: 115 ILQLSKNQIRQIEVGAFNGLPN-LITLELFDNRLPLVPSQAFEYLS-KLRELWLRNNPIE 172
Query: 182 KLENTSFKGLSSLNFLDLS-YNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLR 240
L +F + SL LDL KL +S+ L+ LR L L + V L L
Sbjct: 173 TLPAYAFHRVPSLRRLDLGELRKLSFISEAAFEGLLNLRFLNL--GMCGLKDVPNLTPLV 230
Query: 241 SVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQ 300
+ +L+LS N L G + P + L SL+ L + H++ S + R A L L L+ HN
Sbjct: 231 RLEELELSGNQL-GVVRPGSFQGLVSLRKLWLMHSRISVIERNAFDDLKNLEELNLSHNS 289
Query: 301 IDVLEDHSFRALSTLSHLDLAHN 323
+ L F L L + L HN
Sbjct: 290 LHSLPHDLFTPLQQLERVHLNHN 312
Score = 157 (60.3 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 60/244 (24%), Positives = 105/244 (43%)
Query: 155 LSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAP 214
L+ VP S ++ N L+L N + + + +FK L+ L L LS N++ +
Sbjct: 78 LNEVPQS----ISSNTRYLNLQENSIQVIRSDTFKHLNHLEILQLSKNQIRQIEVGAFNG 133
Query: 215 LVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAH 274
L L L L NRL + A + L + +L L +N + L R+ SL+ L +
Sbjct: 134 LPNLITLELFDNRLPLVPSQAFEYLSKLRELWLRNNPIE-TLPAYAFHRVPSLRRLDLGE 192
Query: 275 -NQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASL 333
+ S + A GL L L+ + + + L L L+L+ N++ V S
Sbjct: 193 LRKLSFISEAAFEGLLNLRFLNL--GMCGLKDVPNLTPLVRLEELELSGNQLGVVRPGSF 250
Query: 334 AHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELIY 393
L +L L L H+ + + ++ LK+L+EL L N + P ++ ++ +
Sbjct: 251 QGLVSLRKLWLMHSRISVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLQQLERVHLN 310
Query: 394 SGVW 397
W
Sbjct: 311 HNPW 314
Score = 101 (40.6 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 46/159 (28%), Positives = 69/159 (43%)
Query: 229 TVSVVAAL-QGLRSVTDLDLSHNLLAGP--LGPSTVPRLSSLKVLSIAHNQFSSV--RRG 283
+V++ AA+ G S + L LL P LGP + L NQ S V +
Sbjct: 17 SVAMQAAMVTGFSSPSPLIWLVQLLLWPHLLGPRLAEASPACPALCSCSNQASRVICTKK 76
Query: 284 ALAGLDKLTS-----LSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSN 338
+L + + S L+ N I V+ +F+ L+ L L L+ N+I + + L N
Sbjct: 77 SLNEVPQSISSNTRYLNLQENSIQVIRSDTFKHLNHLEILQLSKNQIRQIEVGAFNGLPN 136
Query: 339 LTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEP 377
L TL+L N L + L L+EL L +N I P
Sbjct: 137 LITLELFDNRLPLVPSQAFEYLSKLRELWLRNNPIETLP 175
Score = 72 (30.4 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L+ L ++ NQ VR G+ GL L L H++I V+E ++F ++
Sbjct: 229 LVRLEELELSGNQLGVVRPGSFQGLVSLRKLWLMHSRISVIERNAFDDL 277
>UNIPROTKB|O43300 [details] [associations]
symbol:LRRTM2 "Leucine-rich repeat transmembrane neuronal
protein 2" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0042043 "neurexin family protein binding" evidence=IEA]
[GO:0050808 "synapse organization" evidence=IEA] [GO:0060076
"excitatory synapse" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 SMART:SM00013 InterPro:IPR025875
Pfam:PF12799 UniGene:Hs.656653 CleanEx:HS_LRRN2
HOGENOM:HOG000290681 HOVERGEN:HBG052362 EMBL:AY182026 EMBL:AB007876
EMBL:AK291064 EMBL:BC126408 EMBL:BC126410 EMBL:BC143926
IPI:IPI00023576 RefSeq:NP_056379.1 ProteinModelPortal:O43300
SMR:O43300 STRING:O43300 PhosphoSite:O43300 PRIDE:O43300
DNASU:26045 Ensembl:ENST00000274711 GeneID:26045 KEGG:hsa:26045
UCSC:uc011cyz.1 CTD:26045 GeneCards:GC05M138205 HGNC:HGNC:19409
HPA:HPA017323 MIM:610868 neXtProt:NX_O43300 PharmGKB:PA134993038
InParanoid:O43300 OMA:IRQCSMI OrthoDB:EOG4PG60Z GenomeRNAi:26045
NextBio:47883 ArrayExpress:O43300 Bgee:O43300 CleanEx:HS_LRRTM2
Genevestigator:O43300 Uniprot:O43300
Length = 516
Score = 225 (84.3 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 77/250 (30%), Positives = 110/250 (44%)
Query: 122 GLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLY 181
GL + + + F S L L L +N +S V A L L L LS N+++
Sbjct: 65 GLSLRHNHITELERDQFASFSQ-LTWLHLDHNQISTVKEDAFQGLY-KLKELILSSNKIF 122
Query: 182 KLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRS 241
L NT+F L +L LDLS+N+L +L + L L+ L L+ N L V RS
Sbjct: 123 YLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRS 182
Query: 242 VTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 301
+ LDLS N L L + L L+ L + HNQ + + L L +L N+I
Sbjct: 183 LEFLDLSTNRLRS-LARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKI 241
Query: 302 DVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLK 361
L TL LDL N I A+ + NL L + +N L +L ++ L+
Sbjct: 242 SNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILNSLR 301
Query: 362 SLQELRLDDN 371
SL + L N
Sbjct: 302 SLTTVGLSGN 311
Score = 203 (76.5 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 70/232 (30%), Positives = 110/232 (47%)
Query: 148 LGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTL 207
L L +N ++ + A + L L L HNQ+ ++ +F+GL L L LS NK+ L
Sbjct: 66 LSLRHNHITELERDQFASFS-QLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYL 124
Query: 208 SQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVP-RL-- 264
L+ L+ L L N+L+ GLR + L L N L T+P RL
Sbjct: 125 PNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLR------TIPVRLFW 178
Query: 265 --SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 322
SL+ L ++ N+ S+ R AGL KL L HNQ+ + F LS+L L L
Sbjct: 179 DCRSLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQW 238
Query: 323 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 374
N+I ++ L LDL+ N ++A+ + + +L+ L +D+N ++
Sbjct: 239 NKISNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLN 290
Score = 162 (62.1 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 38/108 (35%), Positives = 55/108 (50%)
Query: 270 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 329
LS+ HN + + R A +LT L HNQI +++ +F+ L L L L+ N+I +
Sbjct: 66 LSLRHNHITELERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLP 125
Query: 330 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEP 377
+ L NL LDLS N L +L +L L+ LQ L L N + P
Sbjct: 126 NTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIP 173
Score = 70 (29.7 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 646 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
SL+ L ++ N+ S+ R AGL KL L HNQ+
Sbjct: 182 SLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQL 217
Score = 43 (20.2 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 12/41 (29%), Positives = 18/41 (43%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL 684
L L+ L + HNQ + + L L +L N+I L
Sbjct: 204 LIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNL 244
Score = 40 (19.1 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 10/36 (27%), Positives = 20/36 (55%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 679
+ +LK+L + +N+ +S+ L L LT++ N
Sbjct: 276 MPNLKILLMDNNKLNSLDSKILNSLRSLTTVGLSGN 311
>UNIPROTKB|Q6EMK4 [details] [associations]
symbol:VASN "Vasorin" species:9606 "Homo sapiens"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR003961
PROSITE:PS50026 PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060
SMART:SM00181 GO:GO:0016021 GO:GO:0005576 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 EMBL:AY166584 EMBL:AY358298 EMBL:AY358299
EMBL:BC013767 EMBL:BC068575 IPI:IPI00395488 RefSeq:NP_612449.2
UniGene:Hs.372579 ProteinModelPortal:Q6EMK4 SMR:Q6EMK4
DIP:DIP-46245N STRING:Q6EMK4 PhosphoSite:Q6EMK4 DMDM:74748436
PaxDb:Q6EMK4 PeptideAtlas:Q6EMK4 PRIDE:Q6EMK4
Ensembl:ENST00000304735 GeneID:114990 KEGG:hsa:114990
UCSC:uc002cwj.1 CTD:114990 GeneCards:GC16P004421 HGNC:HGNC:18517
HPA:HPA011246 MIM:608843 neXtProt:NX_Q6EMK4 PharmGKB:PA134974883
eggNOG:NOG273568 HOGENOM:HOG000261606 HOVERGEN:HBG084318
InParanoid:Q6EMK4 OMA:VTQLRPN OrthoDB:EOG4GTKD4 PhylomeDB:Q6EMK4
GenomeRNAi:114990 NextBio:79480 Bgee:Q6EMK4 CleanEx:HS_VASN
Genevestigator:Q6EMK4 GermOnline:ENSG00000168140 Uniprot:Q6EMK4
Length = 673
Score = 227 (85.0 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 82/256 (32%), Positives = 125/256 (48%)
Query: 102 CTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTS 161
CT T +P + + T+ GL + + + G+F GL LQ L L N ++ +P+
Sbjct: 38 CTARQGTTVP-RDVPPDTV-GLYVFENGITMLDAGSFAGLPG-LQLLDLSQNQIASLPSG 94
Query: 162 ALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVL 221
PLA NL LDL+ N+L+++ N +F+GL L L L N++ + L L L
Sbjct: 95 VFQPLA-NLSNLDLTANRLHEITNETFRGLRRLERLYLGKNRIRHIQPGAFDTLDRLLEL 153
Query: 222 RLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVR 281
+LQ N L + L+ L + LDLSHN L L P + ++++ L +A +
Sbjct: 154 KLQDNELRA--LPPLR-LPRLLLLDLSHNSLLA-LEPGILDT-ANVEALRLAGLGLQQLD 208
Query: 282 RGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN-RIVAVSGASLAHLSNLT 340
G + L L L NQ++ + R L L+ L LA N RI + LA L+ L
Sbjct: 209 EGLFSRLRNLHDLDVSDNQLERVPP-VIRGLRGLTRLRLAGNTRIAQLRPEDLAGLAALQ 267
Query: 341 TLDLSHNFLRALTQDL 356
LD+S+ L+AL DL
Sbjct: 268 ELDVSNLSLQALPGDL 283
Score = 150 (57.9 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 62/221 (28%), Positives = 91/221 (41%)
Query: 160 TSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLR 219
T+ + P+ L + N + L+ SF GL L LDLS N++ +L PL L
Sbjct: 44 TTVPRDVPPDTVGLYVFENGITMLDAGSFAGLPGLQLLDLSQNQIASLPSGVFQPLANLS 103
Query: 220 VLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSS 279
L L NRL +GLR + L L N + + P L L L + N+ +
Sbjct: 104 NLDLTANRLHEITNETFRGLRRLERLYLGKNRIRH-IQPGAFDTLDRLLELKLQDNELRA 162
Query: 280 VRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNL 339
+ L +L L HN + LE + + L LA + + + L NL
Sbjct: 163 LPP---LRLPRLLLLDLSHNSLLALEP-GILDTANVEALRLAGLGLQQLDEGLFSRLRNL 218
Query: 340 TTLDLSHNFLRALTQDLITPLKSLQELRLDDND--ISMEPE 378
LD+S N L + +I L+ L LRL N + PE
Sbjct: 219 HDLDVSDNQLERVPP-VIRGLRGLTRLRLAGNTRIAQLRPE 258
Score = 150 (57.9 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 66/233 (28%), Positives = 107/233 (45%)
Query: 92 EPDERVSLLDCTLSNVTVLPGKFLEGVT-LHGLVISSGELKNISDGAFIGLSSPLQALGL 150
+P +S LD T + + + + G+ L L + +++I GAF L L+ L L
Sbjct: 97 QPLANLSNLDLTANRLHEITNETFRGLRRLERLYLGKNRIRHIQPGAFDTLDRLLE-LKL 155
Query: 151 PNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQD 210
+N L +P L P L LDLSHN L LE +++ L L+ L L +
Sbjct: 156 QDNELRALPPLRL----PRLLLLDLSHNSLLALE-PGILDTANVEALRLAGLGLQQLDEG 210
Query: 211 CLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVL 270
+ L L L + N+L V ++GLR +T L L+ N L P + L++L+ L
Sbjct: 211 LFSRLRNLHDLDVSDNQLE-RVPPVIRGLRGLTRLRLAGNTRIAQLRPEDLAGLAALQEL 269
Query: 271 SIAHNQFSSVRRGALAGL-DKLTSLSCHHNQIDVLEDHS-FRALSTLSHLDLA 321
+++ ++ G L+GL +L L+ N + + S F SH+ LA
Sbjct: 270 DVSNLSLQALP-GDLSGLFPRLRLLAAARNPFNCVCPLSWFGPWVRESHVTLA 321
Score = 146 (56.5 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 51/179 (28%), Positives = 85/179 (47%)
Query: 202 NKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTV 261
N + L A L L++L L N++ Q L ++++LDL+ N L + T
Sbjct: 62 NGITMLDAGSFAGLPGLQLLDLSQNQIASLPSGVFQPLANLSNLDLTANRLH-EITNETF 120
Query: 262 PRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 321
L L+ L + N+ ++ GA LD+L L N++ L R L L LDL+
Sbjct: 121 RGLRRLERLYLGKNRIRHIQPGAFDTLDRLLELKLQDNELRALPP--LR-LPRLLLLDLS 177
Query: 322 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECI 380
HN ++A+ L +N+ L L+ L+ L + L + L++L +L + DN + P I
Sbjct: 178 HNSLLALEPGIL-DTANVEALRLAGLGLQQLDEGLFSRLRNLHDLDVSDNQLERVPPVI 235
Score = 133 (51.9 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 75/271 (27%), Positives = 115/271 (42%)
Query: 64 CACDLPHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLP-GKF--LEGVTL 120
C C P T+ CTA + R + PD V L + +T+L G F L G+ L
Sbjct: 28 CQCSQPQTVFCTARQGTTVP-----RDVPPDT-VGLYVFE-NGITMLDAGSFAGLPGLQL 80
Query: 121 HGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQL 180
L +S ++ ++ G F L++ L L L N L + L L+RL L N++
Sbjct: 81 --LDLSQNQIASLPSGVFQPLAN-LSNLDLTANRLHEITNETFRGLR-RLERLYLGKNRI 136
Query: 181 YKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLR 240
++ +F L L L L N+L L L L +L L N L +++ +
Sbjct: 137 RHIQPGAFDTLDRLLELKLQDNELRALPP---LRLPRLLLLDLSHNSL-LALEPGILDTA 192
Query: 241 SVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN- 299
+V L L+ L L RL +L L ++ NQ V + GL LT L N
Sbjct: 193 NVEALRLA-GLGLQQLDEGLFSRLRNLHDLDVSDNQLERVPP-VIRGLRGLTRLRLAGNT 250
Query: 300 QIDVLEDHSFRALSTLSHLDLAHNRIVAVSG 330
+I L L+ L LD+++ + A+ G
Sbjct: 251 RIAQLRPEDLAGLAALQELDVSNLSLQALPG 281
>WB|WBGene00010621 [details] [associations]
symbol:egg-6 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0048477
"oogenesis" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR001611 InterPro:IPR027202 PROSITE:PS51450 GO:GO:0009792
GO:GO:0040010 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
GO:GO:0040011 GO:GO:0048477 GO:GO:0040015 EMBL:Z81098
GeneTree:ENSGT00700000104286 PANTHER:PTHR24371:SF0 HSSP:P12830
EMBL:JQ292908 PIR:T23395 RefSeq:NP_492348.1
ProteinModelPortal:P90920 SMR:P90920 DIP:DIP-24762N
MINT:MINT-1081293 STRING:P90920 EnsemblMetazoa:K07A12.2
GeneID:172670 KEGG:cel:CELE_K07A12.2 UCSC:K07A12.2 CTD:172670
WormBase:K07A12.2 HOGENOM:HOG000020436 InParanoid:P90920
OMA:INNFELM NextBio:876503 Uniprot:P90920
Length = 961
Score = 216 (81.1 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 75/282 (26%), Positives = 129/282 (45%)
Query: 98 SLLDCTLSNVTV--LPGKFLEGVTLHGLVIS-SGELKNISDGAFIGLSSPLQALGLPNNL 154
+L L N + P K L+ V +++ SG + + ++ L L L +N
Sbjct: 151 ALTQLRLENNAICDFPPKSLDAVKASLVLLDVSGNCLDAIPAQILRNAANLMYLDLGSNN 210
Query: 155 LSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAP 214
+S + L L P L L + +N L ++ +F + L +L L N + TL + L
Sbjct: 211 ISEINNFELMNL-PFLRELRVQNNTLRRIHPMAFMNVPQLQYLYLQDNIISTLDGNRLQG 269
Query: 215 LVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAG--PLGPSTVPRLSSLKVLSI 272
L VL + N L + +L+ L ++ + + NL+ L S P +L+++S+
Sbjct: 270 FKNLEVLDVSNNALYA--LPSLKDLPNLKQVRVDGNLITKIETLAFSNNP---NLQLISV 324
Query: 273 AHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGAS 332
+N + R + LDKL L +N + +E F + L L + +N + A+ +S
Sbjct: 325 QNNNIVQISRNSFESLDKLVVLLVGNNSLAKIERGMFDGMKNLQQLSIRNNTLTALDASS 384
Query: 333 LAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 374
A L++LTTLDL HN + + + L L L L +N IS
Sbjct: 385 FAQLAHLTTLDLGHNKIHDIEEGTFDKLSKLFWLDLSNNKIS 426
Score = 211 (79.3 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 69/256 (26%), Positives = 124/256 (48%)
Query: 119 TLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHN 178
TL + ++S ++ +I D AF GLS+ L L L NN + P +L + +L LD+S N
Sbjct: 127 TLMSMNLNSNQISSIPDKAFNGLSA-LTQLRLENNAICDFPPKSLDAVKASLVLLDVSGN 185
Query: 179 QLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQG 238
L + + ++L +LDL N + ++ L L LR LR+Q N L A
Sbjct: 186 CLDAIPAQILRNAANLMYLDLGSNNISEINNFELMNLPFLRELRVQNNTLRRIHPMAFMN 245
Query: 239 LRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHH 298
+ + L L N+++ L + + +L+VL +++N ++ +L L L +
Sbjct: 246 VPQLQYLYLQDNIIS-TLDGNRLQGFKNLEVLDVSNNALYALP--SLKDLPNLKQVRVDG 302
Query: 299 NQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLIT 358
N I +E +F L + + +N IV +S S L L L + +N L + + +
Sbjct: 303 NLITKIETLAFSNNPNLQLISVQNNNIVQISRNSFESLDKLVVLLVGNNSLAKIERGMFD 362
Query: 359 PLKSLQELRLDDNDIS 374
+K+LQ+L + +N ++
Sbjct: 363 GMKNLQQLSIRNNTLT 378
Score = 167 (63.8 bits), Expect = 4.1e-11, Sum P(2) = 4.1e-11
Identities = 71/312 (22%), Positives = 140/312 (44%)
Query: 64 CACDLPHTLRC-TANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHG 122
C C + ++ + N D+ I++++ + DE + +L+ T + LP G L
Sbjct: 30 CDCKISKSMIILSCNGEDVKTIAQTVGTSQIDE-LHILNGTDVKIESLP---FNG--LRT 83
Query: 123 LVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYK 182
+ I + L++ S A+ + + ++ + + N L VP L+ L ++L+ NQ+
Sbjct: 84 IAILNSTLQSFSPTAWRHVEATIEHITINGNELKTVPV--FGNLS-TLMSMNLNSNQISS 140
Query: 183 LENTSFKGLSSLNFLDLSYNKLMTLSQDCL-APLVTLRVLRLQGNRLTVSVVAALQGLRS 241
+ + +F GLS+L L L N + L A +L +L + GN L L+ +
Sbjct: 141 IPDKAFNGLSALTQLRLENNAICDFPPKSLDAVKASLVLLDVSGNCLDAIPAQILRNAAN 200
Query: 242 VTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 301
+ LDL N ++ + + L L+ L + +N + A + +L L N I
Sbjct: 201 LMYLDLGSNNIS-EINNFELMNLPFLRELRVQNNTLRRIHPMAFMNVPQLQYLYLQDNII 259
Query: 302 DVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLK 361
L+ + + L LD+++N + A+ SL L NL + + N + + +
Sbjct: 260 STLDGNRLQGFKNLEVLDVSNNALYALP--SLKDLPNLKQVRVDGNLITKIETLAFSNNP 317
Query: 362 SLQELRLDDNDI 373
+LQ + + +N+I
Sbjct: 318 NLQLISVQNNNI 329
Score = 163 (62.4 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 51/216 (23%), Positives = 97/216 (44%)
Query: 111 PGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNL 170
P F+ L L + + + G + L+ L + NN L +P+ L L PNL
Sbjct: 240 PMAFMNVPQLQYLYLQDNIISTLDGNRLQGFKN-LEVLDVSNNALYALPS--LKDL-PNL 295
Query: 171 DRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTV 230
++ + N + K+E +F +L + + N ++ +S++ L L VL + N L
Sbjct: 296 KQVRVDGNLITKIETLAFSNNPNLQLISVQNNNIVQISRNSFESLDKLVVLLVGNNSLAK 355
Query: 231 SVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDK 290
G++++ L + +N L L S+ +L+ L L + HN+ + G L K
Sbjct: 356 IERGMFDGMKNLQQLSIRNNTLTA-LDASSFAQLAHLTTLDLGHNKIHDIEEGTFDKLSK 414
Query: 291 LTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 326
L L +N+I + F+ +S++ L N+++
Sbjct: 415 LFWLDLSNNKISGFKTSVFK--KKISNILLDGNQLI 448
Score = 129 (50.5 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 59/235 (25%), Positives = 98/235 (41%)
Query: 158 VPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPL-V 216
V T A +D L + + K+E+ F GL ++ L+ + L + S +
Sbjct: 48 VKTIAQTVGTSQIDELHILNGTDVKIESLPFNGLRTIAILN---STLQSFSPTAWRHVEA 104
Query: 217 TLRVLRLQGNRL-TVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHN 275
T+ + + GN L TV V L L S ++L+ N ++ + LS+L L + +N
Sbjct: 105 TIEHITINGNELKTVPVFGNLSTLMS---MNLNSNQISS-IPDKAFNGLSALTQLRLENN 160
Query: 276 QFSSVRRGALAGLD-KLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLA 334
+L + L L N +D + R + L +LDL N I ++ L
Sbjct: 161 AICDFPPKSLDAVKASLVLLDVSGNCLDAIPAQILRNAANLMYLDLGSNNISEINNFELM 220
Query: 335 HLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDL 389
+L L L + +N LR + + LQ L L DN IS GF +++
Sbjct: 221 NLPFLRELRVQNNTLRRIHPMAFMNVPQLQYLYLQDNIISTLDGNRLQGFKNLEV 275
Score = 73 (30.8 bits), Expect = 4.1e-11, Sum P(2) = 4.1e-11
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L VL + +N + + RG G+ L LS +N + L+ SF+ +
Sbjct: 340 LDKLVVLLVGNNSLAKIERGMFDGMKNLQQLSIRNNTLTALDASSFAQL 388
Score = 68 (29.0 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 15/49 (30%), Positives = 29/49 (59%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
+ +L+ LSI +N +++ + A L LT+L HN+I +E+ +F +
Sbjct: 364 MKNLQQLSIRNNTLTALDASSFAQLAHLTTLDLGHNKIHDIEEGTFDKL 412
Score = 59 (25.8 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 19/68 (27%), Positives = 29/68 (42%)
Query: 627 RNNSDSRYVKLQATTIL-LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLE 685
RNN+ L A++ L+ L L + HN+ + G L KL L +N+I +
Sbjct: 373 RNNT---LTALDASSFAQLAHLTTLDLGHNKIHDIEEGTFDKLSKLFWLDLSNNKISGFK 429
Query: 686 DHSFSNVI 693
F I
Sbjct: 430 TSVFKKKI 437
Score = 57 (25.1 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 12/47 (25%), Positives = 24/47 (51%)
Query: 646 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
+L+++S+ +N + R + LDKL L +N + +E F +
Sbjct: 318 NLQLISVQNNNIVQISRNSFESLDKLVVLLVGNNSLAKIERGMFDGM 364
>MGI|MGI:3027390 [details] [associations]
symbol:Lrrc4b "leucine rich repeat containing 4B"
species:10090 "Mus musculus" [GO:0005102 "receptor binding"
evidence=IPI] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0051965 "positive regulation of synapse assembly"
evidence=IDA] InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026883 PROSITE:PS50835 PROSITE:PS51450 MGI:MGI:3027390
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0042734 GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 GeneTree:ENSGT00690000101682 CTD:94030
HOGENOM:HOG000252924 HOVERGEN:HBG052359 KO:K16360 OMA:NNTTCCA
OrthoDB:EOG4W9J3K PANTHER:PTHR24369:SF7 EMBL:BC060263 EMBL:AK140418
IPI:IPI00381059 RefSeq:NP_937893.1 UniGene:Mm.44173 PDB:3ZYN
PDB:3ZYO PDBsum:3ZYN PDBsum:3ZYO ProteinModelPortal:P0C192
SMR:P0C192 IntAct:P0C192 STRING:P0C192 PhosphoSite:P0C192
PaxDb:P0C192 PRIDE:P0C192 Ensembl:ENSMUST00000058667 GeneID:272381
KEGG:mmu:272381 UCSC:uc009gpj.1 InParanoid:P0C192
EvolutionaryTrace:P0C192 NextBio:393574 Bgee:P0C192
CleanEx:MM_LRRC4B Genevestigator:P0C192
GermOnline:ENSMUSG00000047085 Uniprot:P0C192
Length = 709
Score = 227 (85.0 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 68/224 (30%), Positives = 107/224 (47%)
Query: 148 LGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTL 207
L L N + V+ T L +L+ L LS N + K+E +F GL SLN L+L N+L T+
Sbjct: 93 LNLQENSIQVIRTDTFKHLR-HLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTV 151
Query: 208 SQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSL 267
L LR L L+ N + A + S+ LDL + + L +L
Sbjct: 152 PTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNL 211
Query: 268 KVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVA 327
+ L++ + L L +L L N++D++ SF+ L++L L L H ++
Sbjct: 212 RYLNLGMCNLKDIPN--LTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVAT 269
Query: 328 VSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
+ + L +L L+LSHN L +L DL TPL L+ + L+ N
Sbjct: 270 IERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHN 313
Score = 190 (71.9 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 65/202 (32%), Positives = 96/202 (47%)
Query: 123 LVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYK 182
L +S ++ I GAF GL S L L L +N L+ VPT A L+ L L L +N +
Sbjct: 117 LQLSKNLVRKIEVGAFNGLPS-LNTLELFDNRLTTVPTQAFEYLS-KLRELWLRNNPIES 174
Query: 183 LENTSFKGLSSLNFLDLS-YNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRS 241
+ + +F + SL LDL +L +S+ LV LR L L + + L L
Sbjct: 175 IPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNL--GMCNLKDIPNLTALVR 232
Query: 242 VTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 301
+ +L+LS N L + P + L+SL+ L + H Q +++ R A L L L+ HN +
Sbjct: 233 LEELELSGNRL-DLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNL 291
Query: 302 DVLEDHSFRALSTLSHLDLAHN 323
L F L L + L HN
Sbjct: 292 MSLPHDLFTPLHRLERVHLNHN 313
Score = 169 (64.5 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 64/245 (26%), Positives = 107/245 (43%)
Query: 155 LSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAP 214
L+ VP S P+ N L+L N + + +FK L L L LS N + +
Sbjct: 79 LAEVPASI--PV--NTRYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNG 134
Query: 215 LVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPS-TVPRLSSLKVLSIA 273
L +L L L NRLT A + L + +L L +N + PS R+ SL+ L +
Sbjct: 135 LPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESI--PSYAFNRVPSLRRLDLG 192
Query: 274 H-NQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGAS 332
+ + A GL L L+ ++ + + AL L L+L+ NR+ + S
Sbjct: 193 ELKRLEYISEAAFEGLVNLRYLNL--GMCNLKDIPNLTALVRLEELELSGNRLDLIRPGS 250
Query: 333 LAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELI 392
L++L L L H + + ++ LKSL+EL L N++ P ++ + ++ +
Sbjct: 251 FQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHL 310
Query: 393 YSGVW 397
W
Sbjct: 311 NHNPW 315
>RGD|1307121 [details] [associations]
symbol:Lrrc4b "leucine rich repeat containing 4B" species:10116
"Rattus norvegicus" [GO:0005102 "receptor binding"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=IEA] [GO:0051965 "positive regulation of synapse assembly"
evidence=IEA;ISO] InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026883 PROSITE:PS50835 PROSITE:PS51450 RGD:1307121
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0042734 GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 GeneTree:ENSGT00690000101682 CTD:94030
HOGENOM:HOG000252924 KO:K16360 OMA:NNTTCCA OrthoDB:EOG4W9J3K
PANTHER:PTHR24369:SF7 EMBL:CB608563 IPI:IPI00367477
RefSeq:NP_001258010.1 RefSeq:XP_001077685.1 UniGene:Rn.22207
ProteinModelPortal:P0CC10 STRING:P0CC10 PRIDE:P0CC10
Ensembl:ENSRNOT00000026259 GeneID:308571 KEGG:rno:308571
UCSC:RGD:1307121 NextBio:659144 Uniprot:P0CC10
Length = 709
Score = 227 (85.0 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 68/224 (30%), Positives = 107/224 (47%)
Query: 148 LGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTL 207
L L N + V+ T L +L+ L LS N + K+E +F GL SLN L+L N+L T+
Sbjct: 93 LNLQENSIQVIRTDTFKHLR-HLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTV 151
Query: 208 SQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSL 267
L LR L L+ N + A + S+ LDL + + L +L
Sbjct: 152 PTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNL 211
Query: 268 KVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVA 327
+ L++ + L L +L L N++D++ SF+ L++L L L H ++
Sbjct: 212 RYLNLGMCNLKDIPN--LTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVAT 269
Query: 328 VSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
+ + L +L L+LSHN L +L DL TPL L+ + L+ N
Sbjct: 270 IERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHN 313
Score = 190 (71.9 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 65/202 (32%), Positives = 96/202 (47%)
Query: 123 LVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYK 182
L +S ++ I GAF GL S L L L +N L+ VPT A L+ L L L +N +
Sbjct: 117 LQLSKNLVRKIEVGAFNGLPS-LNTLELFDNRLTTVPTQAFEYLS-KLRELWLRNNPIES 174
Query: 183 LENTSFKGLSSLNFLDLS-YNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRS 241
+ + +F + SL LDL +L +S+ LV LR L L + + L L
Sbjct: 175 IPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNL--GMCNLKDIPNLTALVR 232
Query: 242 VTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 301
+ +L+LS N L + P + L+SL+ L + H Q +++ R A L L L+ HN +
Sbjct: 233 LEELELSGNRL-DLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNL 291
Query: 302 DVLEDHSFRALSTLSHLDLAHN 323
L F L L + L HN
Sbjct: 292 MSLPHDLFTPLHRLERVHLNHN 313
Score = 169 (64.5 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 64/245 (26%), Positives = 107/245 (43%)
Query: 155 LSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAP 214
L+ VP S P+ N L+L N + + +FK L L L LS N + +
Sbjct: 79 LAEVPASI--PV--NTRYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNG 134
Query: 215 LVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPS-TVPRLSSLKVLSIA 273
L +L L L NRLT A + L + +L L +N + PS R+ SL+ L +
Sbjct: 135 LPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESI--PSYAFNRVPSLRRLDLG 192
Query: 274 H-NQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGAS 332
+ + A GL L L+ ++ + + AL L L+L+ NR+ + S
Sbjct: 193 ELKRLEYISEAAFEGLVNLRYLNL--GMCNLKDIPNLTALVRLEELELSGNRLDLIRPGS 250
Query: 333 LAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELI 392
L++L L L H + + ++ LKSL+EL L N++ P ++ + ++ +
Sbjct: 251 FQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHL 310
Query: 393 YSGVW 397
W
Sbjct: 311 NHNPW 315
>UNIPROTKB|Q9NT99 [details] [associations]
symbol:LRRC4B "Leucine-rich repeat-containing protein 4B"
species:9606 "Homo sapiens" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0042734 "presynaptic
membrane" evidence=IEA] [GO:0051965 "positive regulation of synapse
assembly" evidence=ISS] InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026883 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021
GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030054
InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0042734
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 EMBL:AC008743 InterPro:IPR026906
Pfam:PF13306 EMBL:BC019687 EMBL:BC056207 EMBL:AL137451
IPI:IPI00300241 PIR:T46266 RefSeq:NP_001073926.1 UniGene:Hs.120873
ProteinModelPortal:Q9NT99 SMR:Q9NT99 STRING:Q9NT99
PhosphoSite:Q9NT99 DMDM:91207142 PaxDb:Q9NT99 PRIDE:Q9NT99
DNASU:94030 Ensembl:ENST00000389201 GeneID:94030 KEGG:hsa:94030
UCSC:uc002pss.3 CTD:94030 GeneCards:GC19M051020 H-InvDB:HIX0015363
HGNC:HGNC:25042 neXtProt:NX_Q9NT99 PharmGKB:PA134890612
HOGENOM:HOG000252924 HOVERGEN:HBG052359 InParanoid:Q9NT99 KO:K16360
OMA:NNTTCCA OrthoDB:EOG4W9J3K ChiTaRS:LRRC4B GenomeRNAi:94030
NextBio:78327 ArrayExpress:Q9NT99 Bgee:Q9NT99 CleanEx:HS_LRRC4B
Genevestigator:Q9NT99 GermOnline:ENSG00000131409
PANTHER:PTHR24369:SF7 Uniprot:Q9NT99
Length = 713
Score = 227 (85.0 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 72/239 (30%), Positives = 113/239 (47%)
Query: 135 DGAFIGLSSPLQA--LGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLS 192
D A + S P+ L L N + V+ T L +L+ L LS N + K+E +F GL
Sbjct: 76 DLAEVPASIPVNTRYLNLQENGIQVIRTDTFKHLR-HLEILQLSKNLVRKIEVGAFNGLP 134
Query: 193 SLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLL 252
SLN L+L N+L T+ L LR L L+ N + A + S+ LDL
Sbjct: 135 SLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKR 194
Query: 253 AGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRAL 312
+ + L +L+ L++ + L L +L L N++D++ SF+ L
Sbjct: 195 LEYISEAAFEGLVNLRYLNLGMCNLKDIPN--LTALVRLEELELSGNRLDLIRPGSFQGL 252
Query: 313 STLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
++L L L H ++ + + L +L L+LSHN L +L DL TPL L+ + L+ N
Sbjct: 253 TSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHN 311
Score = 190 (71.9 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 65/202 (32%), Positives = 96/202 (47%)
Query: 123 LVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYK 182
L +S ++ I GAF GL S L L L +N L+ VPT A L+ L L L +N +
Sbjct: 115 LQLSKNLVRKIEVGAFNGLPS-LNTLELFDNRLTTVPTQAFEYLS-KLRELWLRNNPIES 172
Query: 183 LENTSFKGLSSLNFLDLS-YNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRS 241
+ + +F + SL LDL +L +S+ LV LR L L + + L L
Sbjct: 173 IPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNL--GMCNLKDIPNLTALVR 230
Query: 242 VTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 301
+ +L+LS N L + P + L+SL+ L + H Q +++ R A L L L+ HN +
Sbjct: 231 LEELELSGNRL-DLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNL 289
Query: 302 DVLEDHSFRALSTLSHLDLAHN 323
L F L L + L HN
Sbjct: 290 MSLPHDLFTPLHRLERVHLNHN 311
Score = 167 (63.8 bits), Expect = 8.4e-09, P = 8.4e-09
Identities = 64/245 (26%), Positives = 107/245 (43%)
Query: 155 LSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAP 214
L+ VP S P+ N L+L N + + +FK L L L LS N + +
Sbjct: 77 LAEVPASI--PV--NTRYLNLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNG 132
Query: 215 LVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPS-TVPRLSSLKVLSIA 273
L +L L L NRLT A + L + +L L +N + PS R+ SL+ L +
Sbjct: 133 LPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESI--PSYAFNRVPSLRRLDLG 190
Query: 274 H-NQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGAS 332
+ + A GL L L+ ++ + + AL L L+L+ NR+ + S
Sbjct: 191 ELKRLEYISEAAFEGLVNLRYLNL--GMCNLKDIPNLTALVRLEELELSGNRLDLIRPGS 248
Query: 333 LAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELI 392
L++L L L H + + ++ LKSL+EL L N++ P ++ + ++ +
Sbjct: 249 FQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHL 308
Query: 393 YSGVW 397
W
Sbjct: 309 NHNPW 313
>RGD|1308146 [details] [associations]
symbol:Shoc2 "soc-2 (suppressor of clear) homolog (C. elegans)"
species:10116 "Rattus norvegicus" [GO:0000164 "protein phosphatase
type 1 complex" evidence=IEA;ISO;ISS] [GO:0005634 "nucleus"
evidence=IEA;ISO;ISS] [GO:0005737 "cytoplasm" evidence=ISO;ISS]
[GO:0019903 "protein phosphatase binding" evidence=IEA;ISO;ISS]
[GO:0046579 "positive regulation of Ras protein signal
transduction" evidence=IEA;ISO;ISS] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR027036 PROSITE:PS51450 RGD:1308146 GO:GO:0005634
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875
Pfam:PF12799 GO:GO:0046579 GO:GO:0019903 GO:GO:0000164 HSSP:P07359
HOGENOM:HOG000116557 CTD:8036 HOVERGEN:HBG055661 OrthoDB:EOG408N7W
PANTHER:PTHR23155:SF38 EMBL:BC079032 IPI:IPI00464721
RefSeq:NP_001013173.1 UniGene:Rn.156055 ProteinModelPortal:Q6AYI5
PRIDE:Q6AYI5 GeneID:309548 KEGG:rno:309548 UCSC:RGD:1308146
InParanoid:Q6AYI5 NextBio:660958 ArrayExpress:Q6AYI5
Genevestigator:Q6AYI5 Uniprot:Q6AYI5
Length = 582
Score = 224 (83.9 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 93/332 (28%), Positives = 155/332 (46%)
Query: 69 PHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSG 128
P+ T KS +++ L +E LD + ++ +LP E L L + S
Sbjct: 75 PNPALGTRKKSSNAEVTKELNKCR-EENSMRLDLSKRSIHILPPSVKELTQLTELYLYSN 133
Query: 129 ELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSF 188
+L+++ A +G L L L N L+ +P S L L L LDL HN+L ++ + +
Sbjct: 134 KLQSLP--AEVGCLVNLMTLALSENSLTSLPDS-LDNLK-KLRMLDLRHNKLREIPSVVY 189
Query: 189 KGLSSLNFLDLSYNKLMTLSQDC--LAPLVTL-----RVLRLQG------NRLTVSVVA- 234
+ L SL L L +N++ + +D L L TL ++ +L N +T+ V
Sbjct: 190 R-LDSLTTLYLRFNRITAVEKDVRNLPRLSTLSIRENKIKQLPAEIGELCNLITLDVAHN 248
Query: 235 ALQGL-------RSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAG 287
L+ L +T+LDL HN L P T+ LSSL L + +N+ S++ R +LA
Sbjct: 249 QLEHLPKEIGNCTQITNLDLQHNELLDL--PDTIGNLSSLNRLGLRYNRLSAIPR-SLAK 305
Query: 288 LDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN--RIVAVSGASLAHLSNLTTLDLS 345
L L+ +N I L + +L L+ L LA N ++ V G S S + +L++
Sbjct: 306 CSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPS--QFSTIYSLNME 363
Query: 346 HNFLRALTQDLITPLKSLQELRLDDNDISMEP 377
HN + + + + K L +L + DN ++ P
Sbjct: 364 HNRINKIPFGIFSRAKVLSKLNMKDNQLTSLP 395
Score = 212 (79.7 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 74/232 (31%), Positives = 118/232 (50%)
Query: 143 SPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHN--QLYKLENTS-FKGLSSLNFLDL 199
S L+ L L NN +S +P S L+ L L+ L L+ N QLY + S F + SLN +
Sbjct: 307 SALEELNLENNNISTLPESLLSSLV-KLNSLTLARNCFQLYPVGGPSQFSTIYSLN---M 362
Query: 200 SYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPS 259
+N++ + + L L ++ N+LT S+ S+ +L+L+ N L P
Sbjct: 363 EHNRINKIPFGIFSRAKVLSKLNMKDNQLT-SLPLDFGTWTSMVELNLATNQLTKI--PE 419
Query: 260 TVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 319
V L SL+VL +++N + G L L KL L N+++ L + L L L
Sbjct: 420 DVSGLVSLEVLILSNNLLKKLPHG-LGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLV 477
Query: 320 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
L +N++ + + HL+NLT L L N L L +++ T L++L+EL L+DN
Sbjct: 478 LTNNQLTTLP-RGIGHLTNLTHLGLGENLLTHLPEEIGT-LENLEELYLNDN 527
Score = 185 (70.2 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 84/316 (26%), Positives = 144/316 (45%)
Query: 68 LPHTLRCTANKSDLYAISESLRGLEPDE---RVSLLDCTLS--NVTVLPGKFLEGVTLHG 122
LP +++ ++LY S L+ L P E V+L+ LS ++T LP L
Sbjct: 115 LPPSVKELTQLTELYLYSNKLQSL-PAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRM 173
Query: 123 LVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYK 182
L + +L+ I + L S L L L N ++ V P L L + N++ +
Sbjct: 174 LDLRHNKLREIPSVVY-RLDS-LTTLYLRFNRITAVEKDVRN--LPRLSTLSIRENKIKQ 229
Query: 183 LENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSV 242
L L +L LD+++N+L L ++ + + L LQ N L + + + L S+
Sbjct: 230 LP-AEIGELCNLITLDVAHNQLEHLPKE-IGNCTQITNLDLQHNEL-LDLPDTIGNLSSL 286
Query: 243 TDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID 302
L L +N L+ P ++ + S+L+ L++ +N S++ L+ L KL SL+ N
Sbjct: 287 NRLGLRYNRLSAI--PRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQ 344
Query: 303 VLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKS 362
+ ST+ L++ HNRI + + L+ L++ N L +L D T S
Sbjct: 345 LYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGT-WTS 403
Query: 363 LQELRLDDNDISMEPE 378
+ EL L N ++ PE
Sbjct: 404 MVELNLATNQLTKIPE 419
Score = 179 (68.1 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 73/234 (31%), Positives = 116/234 (49%)
Query: 148 LGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTL 207
L L + ++P S + L L L L N+L L L +L L LS N L +L
Sbjct: 105 LDLSKRSIHILPPS-VKELT-QLTELYLYSNKLQSLP-AEVGCLVNLMTLALSENSLTSL 161
Query: 208 SQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHN-LLAGPLGPSTVPRLSS 266
D L L LR+L L+ N+L + + + L S+T L L N + A +PRLS+
Sbjct: 162 P-DSLDNLKKLRMLDLRHNKLR-EIPSVVYRLDSLTTLYLRFNRITAVEKDVRNLPRLST 219
Query: 267 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 326
L SI N+ + + L L +L HNQ++ L + +++LDL HN ++
Sbjct: 220 L---SIRENKIKQLP-AEIGELCNLITLDVAHNQLEHLPKEIGNC-TQITNLDLQHNELL 274
Query: 327 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECI 380
+ ++ +LS+L L L +N L A+ + L +L+EL L++N+IS PE +
Sbjct: 275 DLPD-TIGNLSSLNRLGLRYNRLSAIPRSL-AKCSALEELNLENNNISTLPESL 326
Score = 55 (24.4 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 19/72 (26%), Positives = 35/72 (48%)
Query: 619 AQQEDDINRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHH 678
A +E ++ NN + L ++ + L+SL ++A N F G + + SL+ H
Sbjct: 308 ALEELNLENNNISTLPESLLSSLVKLNSL---TLARNCFQLYPVGGPSQFSTIYSLNMEH 364
Query: 679 NQIDVLEDHSFS 690
N+I+ + FS
Sbjct: 365 NRINKIPFGIFS 376
Score = 47 (21.6 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 18/66 (27%), Positives = 30/66 (45%)
Query: 621 QEDDINRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQ 680
+E D+ N +S L L L+ L + +NQ +++ RG + L LT L N
Sbjct: 451 RELDLEENKLES----LPNEIAYLKDLQKLVLTNNQLTTLPRG-IGHLTNLTHLGLGENL 505
Query: 681 IDVLED 686
+ L +
Sbjct: 506 LTHLPE 511
Score = 43 (20.2 bits), Expect = 6.1e-10, Sum P(2) = 6.1e-10
Identities = 10/40 (25%), Positives = 21/40 (52%)
Query: 645 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL 684
S++ L++ HN+ + + G + L+ L+ NQ+ L
Sbjct: 355 STIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSL 394
Score = 37 (18.1 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 470 LGTVQVYVQLWTNYDPNC-LLTITLYIDGDVIVQKNTNC 507
+GT++ +L+ N +PN L L + + + NC
Sbjct: 513 IGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENC 551
>ZFIN|ZDB-GENE-080327-25 [details] [associations]
symbol:lrrc4ba "leucine rich repeat containing 4Ba"
species:7955 "Danio rerio" [GO:0051965 "positive regulation of
synapse assembly" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026883 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-080327-25 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00690000101682 KO:K16360
PANTHER:PTHR24369:SF7 EMBL:CR936968 IPI:IPI00774078
RefSeq:XP_684717.3 UniGene:Dr.114368 Ensembl:ENSDART00000076649
Ensembl:ENSDART00000150958 GeneID:556747 KEGG:dre:556747 CTD:556747
NextBio:20881642 Uniprot:F1QBH8
Length = 729
Score = 227 (85.0 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 66/231 (28%), Positives = 112/231 (48%)
Query: 141 LSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLS 200
+S+ + L L N + V+ + L +L+ L LS NQ+ ++E +F GL +LN L+L
Sbjct: 67 ISNNTRYLNLQENTIQVIKSDTFKHLR-HLEILQLSKNQIRQIEVGAFNGLPNLNTLELF 125
Query: 201 YNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPST 260
N+L + L LR L L+ N + A + S+ LDL + +
Sbjct: 126 DNRLTLVPSQAFEYLSKLRELWLRNNPIETLPGYAFHRVPSLRRLDLGELKKLDYISDAA 185
Query: 261 VPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 320
L +L+ L++ + L L +L L N+++++ SF+ L +L L L
Sbjct: 186 FVGLINLRYLNLGMCGLKDIPN--LTPLVRLEELELSGNRLEIIRPGSFQGLESLRKLWL 243
Query: 321 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
H+++ + + L NL L+LSHN L +L DL TPL+ L+ + L+ N
Sbjct: 244 MHSQMSVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLQKLERVHLNHN 294
Score = 191 (72.3 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 65/202 (32%), Positives = 95/202 (47%)
Query: 123 LVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYK 182
L +S +++ I GAF GL + L L L +N L++VP+ A L+ L L L +N +
Sbjct: 98 LQLSKNQIRQIEVGAFNGLPN-LNTLELFDNRLTLVPSQAFEYLS-KLRELWLRNNPIET 155
Query: 183 LENTSFKGLSSLNFLDLS-YNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRS 241
L +F + SL LDL KL +S L+ LR L L + + L L
Sbjct: 156 LPGYAFHRVPSLRRLDLGELKKLDYISDAAFVGLINLRYLNL--GMCGLKDIPNLTPLVR 213
Query: 242 VTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 301
+ +L+LS N L + P + L SL+ L + H+Q S + R A L L L+ HN +
Sbjct: 214 LEELELSGNRLE-IIRPGSFQGLESLRKLWLMHSQMSVIERNAFDDLKNLEELNLSHNSL 272
Query: 302 DVLEDHSFRALSTLSHLDLAHN 323
L F L L + L HN
Sbjct: 273 HSLPHDLFTPLQKLERVHLNHN 294
Score = 161 (61.7 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 56/233 (24%), Positives = 100/233 (42%)
Query: 166 LAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQG 225
++ N L+L N + +++ +FK L L L LS N++ + L L L L
Sbjct: 67 ISNNTRYLNLQENTIQVIKSDTFKHLRHLEILQLSKNQIRQIEVGAFNGLPNLNTLELFD 126
Query: 226 NRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAH-NQFSSVRRGA 284
NRLT+ A + L + +L L +N + L R+ SL+ L + + + A
Sbjct: 127 NRLTLVPSQAFEYLSKLRELWLRNNPIE-TLPGYAFHRVPSLRRLDLGELKKLDYISDAA 185
Query: 285 LAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDL 344
GL L L+ + + + L L L+L+ NR+ + S L +L L L
Sbjct: 186 FVGLINLRYLNL--GMCGLKDIPNLTPLVRLEELELSGNRLEIIRPGSFQGLESLRKLWL 243
Query: 345 SHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELIYSGVW 397
H+ + + ++ LK+L+EL L N + P ++ ++ + W
Sbjct: 244 MHSQMSVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLQKLERVHLNHNPW 296
Score = 124 (48.7 bits), Expect = 0.00040, P = 0.00040
Identities = 49/148 (33%), Positives = 72/148 (48%)
Query: 107 VTVLPGKFLEGV-TLHGLVISSGELKN---ISDGAFIGLSSPLQALGLPNNLLSVVPTSA 162
+ LPG V +L L + GELK ISD AF+GL + L+ L L L +P
Sbjct: 153 IETLPGYAFHRVPSLRRLDL--GELKKLDYISDAAFVGLIN-LRYLNLGMCGLKDIPN-- 207
Query: 163 LAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLR 222
L PL L+ L+LS N+L + SF+GL SL L L ++++ + ++ L L L
Sbjct: 208 LTPLV-RLEELELSGNRLEIIRPGSFQGLESLRKLWLMHSQMSVIERNAFDDLKNLEELN 266
Query: 223 LQGNRLTVSVVAALQGLRSVTDLDLSHN 250
L N L L+ + + L+HN
Sbjct: 267 LSHNSLHSLPHDLFTPLQKLERVHLNHN 294
>ZFIN|ZDB-GENE-050522-533 [details] [associations]
symbol:lrrc4c "leucine rich repeat containing 4C"
species:7955 "Danio rerio" [GO:0050770 "regulation of axonogenesis"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026878 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-050522-533 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
HOVERGEN:HBG052359 CTD:57689 KO:K07523 OMA:WITPNGS
PANTHER:PTHR24369:SF8 EMBL:BC095314 IPI:IPI00495437
RefSeq:NP_001018583.1 UniGene:Dr.79725 ProteinModelPortal:Q503I7
GeneID:553785 KEGG:dre:553785 InParanoid:Q503I7 NextBio:20880504
Uniprot:Q503I7
Length = 647
Score = 226 (84.6 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 75/282 (26%), Positives = 126/282 (44%)
Query: 140 GLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDL 199
G+S+ + L L NL+ V+ + L +L+ L LS N + +E +F GL++LN L+L
Sbjct: 74 GISTNTRYLNLQENLIQVIKVDSFKHLR-HLEILQLSKNHIRNIEIGAFNGLANLNTLEL 132
Query: 200 SYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPS 259
N+L T+ L L+ L L+ N + A + S+ LDL +
Sbjct: 133 FDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLSYISEG 192
Query: 260 TVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 319
LS+L+ L++ + L L +L L NQ+ ++ SF+ L L L
Sbjct: 193 AFEGLSNLRYLNLGMCNLKEIPN--LIPLVRLDELEMSGNQLSIIRPGSFKGLVHLQKLW 250
Query: 320 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPEC 379
+ H +I + + L +L L+L+HN L L DL TPL L+ + L N + C
Sbjct: 251 MMHAQIQTIERNAFDDLQSLVELNLAHNNLTLLPHDLFTPLHHLERVHLHHNPWN----C 306
Query: 380 IYVGFNTMDLELIYSGVWRHSTLLIPVMLSLCTRSSVVTRYR 421
+ ++++ W ++P S C R S T ++
Sbjct: 307 --------NCDILWLSWWLKE--MVPANTSCCARCSSPTSHK 338
Score = 185 (70.2 bits), Expect = 8.0e-11, P = 8.0e-11
Identities = 71/261 (27%), Positives = 117/261 (44%)
Query: 69 PHTLRCTANKSDLYAISESLR----GLEPDER-VSLLDCTLSNVTVLPGKFLEGVTLHGL 123
P C+ S + LR G+ + R ++L + + + V K L + + L
Sbjct: 49 PSVCSCSNQFSKVICTRRGLRDVPDGISTNTRYLNLQENLIQVIKVDSFKHLRHLEI--L 106
Query: 124 VISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKL 183
+S ++NI GAF GL++ L L L +N L+ +P A L+ L L L +N + +
Sbjct: 107 QLSKNHIRNIEIGAFNGLAN-LNTLELFDNRLTTIPNGAFEYLS-KLKELWLRNNPIESI 164
Query: 184 ENTSFKGLSSLNFLDLS-YNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSV 242
+ +F + SL LDL +L +S+ L LR L L + + L L +
Sbjct: 165 PSYAFNRVPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNL--GMCNLKEIPNLIPLVRL 222
Query: 243 TDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID 302
+L++S N L+ + P + L L+ L + H Q ++ R A L L L+ HN +
Sbjct: 223 DELEMSGNQLS-IIRPGSFKGLVHLQKLWMMHAQIQTIERNAFDDLQSLVELNLAHNNLT 281
Query: 303 VLEDHSFRALSTLSHLDLAHN 323
+L F L L + L HN
Sbjct: 282 LLPHDLFTPLHHLERVHLHHN 302
>ZFIN|ZDB-GENE-080327-8 [details] [associations]
symbol:lrrtm2 "leucine rich repeat transmembrane
neuronal 2" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IDA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-080327-8 InterPro:IPR003591 SMART:SM00369
GO:GO:0042802 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GeneTree:ENSGT00700000104056 EMBL:CR381529 EMBL:CU681852
IPI:IPI00866135 Ensembl:ENSDART00000105477
Ensembl:ENSDART00000130532 Uniprot:F1Q8H9
Length = 543
Score = 224 (83.9 bits), Expect = 3.0e-15, P = 3.0e-15
Identities = 84/281 (29%), Positives = 120/281 (42%)
Query: 122 GLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLY 181
GL + + +S F G + L L L +N ++ V A L L L+LS N++
Sbjct: 66 GLSLRHNSISELSSDQFFGFTQ-LTWLHLDHNQITTVHEDAFQGLY-KLKDLNLSSNRIT 123
Query: 182 KLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRS 241
KL NT+F L +L LDLS+N++ L + L L++L L+ N L + V A RS
Sbjct: 124 KLPNTTFIHLINLQILDLSFNQMTALEPELFHGLRKLQILHLRSNSLRTTPVRAFWDCRS 183
Query: 242 VTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 301
+ L LS+N L L + L L+ L + HN + + L L L N+I
Sbjct: 184 LEYLGLSNNRLRS-LARNGFAGLIKLRELHLEHNHLTKINLAHFPRLVALQFLYLQWNKI 242
Query: 302 DVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLK 361
+ L +TL LDL N I + L +L L L +N L L + K
Sbjct: 243 NNLTSTMEWKWTTLEKLDLTGNEIRVLIPEVFETLPSLKILLLDNNKLSNLDSQTMDMWK 302
Query: 362 SLQELRLDDNDISMEPECIYVGFNTMDLELIYSGVWRHSTL 402
SL + L N EC N + G W HS L
Sbjct: 303 SLNVIGLSSNLW----ECTKRICNLATWLSTFKGRWEHSIL 339
Score = 223 (83.6 bits), Expect = 3.9e-15, P = 3.9e-15
Identities = 71/236 (30%), Positives = 111/236 (47%)
Query: 140 GLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDL 199
G+ L L +N +S + + L L L HNQ+ + +F+GL L L+L
Sbjct: 59 GVDKGALGLSLRHNSISELSSDQFFGFT-QLTWLHLDHNQITTVHEDAFQGLYKLKDLNL 117
Query: 200 SYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDL-SHNLLAGPLGP 258
S N++ L L+ L++L L N++T GLR + L L S++L P+
Sbjct: 118 SSNRITKLPNTTFIHLINLQILDLSFNQMTALEPELFHGLRKLQILHLRSNSLRTTPVRA 177
Query: 259 STVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHL 318
R SL+ L +++N+ S+ R AGL KL L HN + + F L L L
Sbjct: 178 FWDCR--SLEYLGLSNNRLRSLARNGFAGLIKLRELHLEHNHLTKINLAHFPRLVALQFL 235
Query: 319 DLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 374
L N+I ++ + L LDL+ N +R L ++ L SL+ L LD+N +S
Sbjct: 236 YLQWNKINNLTSTMEWKWTTLEKLDLTGNEIRVLIPEVFETLPSLKILLLDNNKLS 291
Score = 113 (44.8 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 39/119 (32%), Positives = 55/119 (46%)
Query: 276 QFSSVRRGALA---GLDK-LTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGA 331
QF +G LA G+DK LS HN I L F + L+ L L HN+I V
Sbjct: 45 QFYCDTQGLLAPPDGVDKGALGLSLRHNSISELSSDQFFGFTQLTWLHLDHNQITTVHED 104
Query: 332 SLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS-MEPECIYVGFNTMDL 389
+ L L L+LS N + L L +LQ L L N ++ +EPE ++ G + +
Sbjct: 105 AFQGLYKLKDLNLSSNRITKLPNTTFIHLINLQILDLSFNQMTALEPE-LFHGLRKLQI 162
Score = 69 (29.3 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 646 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNVI 693
SL+ L +++N+ S+ R AGL KL L HN + + F ++
Sbjct: 183 SLEYLGLSNNRLRSLARNGFAGLIKLRELHLEHNHLTKINLAHFPRLV 230
>RGD|628615 [details] [associations]
symbol:Lgr4 "leucine-rich repeat-containing G protein-coupled
receptor 4" species:10116 "Rattus norvegicus" [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0030539 "male genitalia development"
evidence=IEA;ISO] [GO:0035239 "tube morphogenesis" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0050673
"epithelial cell proliferation" evidence=IEA;ISO] [GO:0061290
"canonical Wnt receptor signaling pathway involved in metanephric
kidney development" evidence=IEA;ISO] [GO:0072202 "cell
differentiation involved in metanephros development"
evidence=IEA;ISO] [GO:0072224 "metanephric glomerulus development"
evidence=IEA;ISO] [GO:0072282 "metanephric nephron tubule
morphogenesis" evidence=IEA;ISO] [GO:0090190 "positive regulation
of branching involved in ureteric bud morphogenesis"
evidence=IEA;ISO] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 InterPro:IPR017452
Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373 PROSITE:PS00237
PROSITE:PS50262 PROSITE:PS51450 EMBL:AF061443 RGD:628615
GO:GO:0016021 GO:GO:0005886 GO:GO:0045892 GO:GO:0045893
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030539
GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 GO:GO:0061290 GO:GO:0072282 CTD:55366
HOVERGEN:HBG031675 KO:K04309 OrthoDB:EOG476JZH GO:GO:0072202
GO:GO:0072224 HOGENOM:HOG000231829 IPI:IPI00339207
RefSeq:NP_775450.1 UniGene:Rn.162671 ProteinModelPortal:Q9Z2H4
PhosphoSite:Q9Z2H4 GeneID:286994 KEGG:rno:286994 UCSC:RGD:628615
InParanoid:Q9Z2H4 NextBio:625274 ArrayExpress:Q9Z2H4
Genevestigator:Q9Z2H4 GermOnline:ENSRNOG00000005715 Uniprot:Q9Z2H4
Length = 951
Score = 224 (83.9 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 69/211 (32%), Positives = 104/211 (49%)
Query: 173 LDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSV 232
LD+S N + +L +FK L L L+ N L + L+ L L+VL LQ N+L
Sbjct: 62 LDISMNNITQLPEDAFKSFPFLEELQLAGNDLSLIHPKALSGLKELKVLTLQNNQLRTVP 121
Query: 233 VAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLT 292
A+ GL ++ L L N + + + L L+ L + N + V L+ L L
Sbjct: 122 SEAIHGLSALQSLRLDANHITS-VPEDSFEGLVQLRHLWLDDNSLTEVPVRPLSNLPTLQ 180
Query: 293 SLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRAL 352
+L+ N I + D +F LS+L L L +N+I ++S L NL TLDL++N+L
Sbjct: 181 ALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGLDNLETLDLNYNYLDEF 240
Query: 353 TQDLITPLKSLQELRLDDNDISMEPECIYVG 383
Q I L SL+EL N IS+ P+ + G
Sbjct: 241 PQ-AIKALPSLKELGFHSNSISVIPDGAFGG 270
Score = 199 (75.1 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 85/312 (27%), Positives = 141/312 (45%)
Query: 79 SDLYAIS-ESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVT-LHGLVISSGELKNISDG 136
+DL I ++L GL+ + +L + + +P + + G++ L L + + + ++ +
Sbjct: 91 NDLSLIHPKALSGLK---ELKVLTLQNNQLRTVPSEAIHGLSALQSLRLDANHITSVPED 147
Query: 137 AFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNF 196
+F GL L+ L L +N L+ VP L+ L P L L L+ N + + + +F LSSL
Sbjct: 148 SFEGLVQ-LRHLWLDDNSLTEVPVRPLSNL-PTLQALTLALNNISSIPDFAFTNLSSLVV 205
Query: 197 LDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAG-P 255
L L NK+ +LSQ C L L L L N L A++ L S+ +L N ++ P
Sbjct: 206 LHLHNNKIKSLSQHCFDGLDNLETLDLNYNYLD-EFPQAIKALPSLKELGFHSNSISVIP 264
Query: 256 LGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTL 315
G L L+ + + N S V A L L L + V + L
Sbjct: 265 DGAFGGNPL--LRTIHLYDNPLSFVGNSAFHNLSDLHCLVIRGASL-VQWFPNLTGTVHL 321
Query: 316 SHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISM 375
L L +I ++ + L TLDLS+N +R L ++L+E+ L N IS+
Sbjct: 322 ESLTLTGTKISSIPDDLCQNQKMLRTLDLSYNNIRDLPS--FNGCRALEEISLQRNQISL 379
Query: 376 EPECIYVGFNTM 387
E + G ++
Sbjct: 380 IKENTFQGLTSL 391
Score = 186 (70.5 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 71/275 (25%), Positives = 125/275 (45%)
Query: 100 LDCTLSNVTVLPG-KFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVV 158
L L+N++ +P F +L L + + ++K++S F GL + L+ L L N L
Sbjct: 182 LTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGLDN-LETLDLNYNYLDEF 240
Query: 159 PTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTL 218
P A+ L P+L L N + + + +F G L + L N L + L L
Sbjct: 241 P-QAIKAL-PSLKELGFHSNSISVIPDGAFGGNPLLRTIHLYDNPLSFVGNSAFHNLSDL 298
Query: 219 RVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFS 278
L ++G L V L G + L L+ ++ + L+ L +++N
Sbjct: 299 HCLVIRGASL-VQWFPNLTGTVHLESLTLTGTKISS-IPDDLCQNQKMLRTLDLSYNNIR 356
Query: 279 SVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSN 338
+ + G L +S NQI ++++++F+ L++L LDL+ N I + + A L
Sbjct: 357 DLP--SFNGCRALEEISLQRNQISLIKENTFQGLTSLRILDLSRNLIREIHSGAFAKLGT 414
Query: 339 LTTLDLSHNFLRAL-TQDL--ITPLKSLQELRLDD 370
+T LD+S N L + T+ L + LK + +L D
Sbjct: 415 ITNLDVSFNELTSFPTEGLNGLNQLKLVGNFKLKD 449
Score = 186 (70.5 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 86/323 (26%), Positives = 134/323 (41%)
Query: 71 TLRCTANKSDLYAISE-SLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGE 129
+LR AN + ++ E S GL + L D +L+ V V P L TL L ++
Sbjct: 133 SLRLDANH--ITSVPEDSFEGLVQLRHLWLDDNSLTEVPVRPLSNLP--TLQALTLALNN 188
Query: 130 LKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFK 189
+ +I D AF LSS L L L NN + + L NL+ LDL++N L + + K
Sbjct: 189 ISSIPDFAFTNLSS-LVVLHLHNNKIKSLSQHCFDGL-DNLETLDLNYNYLDEFPQ-AIK 245
Query: 190 GLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSH 249
L SL L N + + LR + L N L+ +A L DL
Sbjct: 246 ALPSLKELGFHSNSISVIPDGAFGGNPLLRTIHLYDNPLSFVGNSAFHNLS-----DLHC 300
Query: 250 NLLAGPLGPSTVPRLSS---LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLED 306
++ G P L+ L+ L++ + SS+ L +L +N I L
Sbjct: 301 LVIRGASLVQWFPNLTGTVHLESLTLTGTKISSIPDDLCQNQKMLRTLDLSYNNIRDLP- 359
Query: 307 HSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQEL 366
SF L + L N+I + + L++L LDLS N +R + L ++ L
Sbjct: 360 -SFNGCRALEEISLQRNQISLIKENTFQGLTSLRILDLSRNLIREIHSGAFAKLGTITNL 418
Query: 367 RLDDNDISMEPECIYVGFNTMDL 389
+ N+++ P G N + L
Sbjct: 419 DVSFNELTSFPTEGLNGLNQLKL 441
Score = 164 (62.8 bits), Expect = 9.8e-09, Sum P(2) = 9.8e-09
Identities = 57/203 (28%), Positives = 91/203 (44%)
Query: 219 RVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFS 278
+ L + N +T A + + +L L+ N L+ + P + L LKVL++ +NQ
Sbjct: 60 QALDISMNNITQLPEDAFKSFPFLEELQLAGNDLS-LIHPKALSGLKELKVLTLQNNQLR 118
Query: 279 SVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSN 338
+V A+ GL L SL N I + + SF L L HL L N + V L++L
Sbjct: 119 TVPSEAIHGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPVRPLSNLPT 178
Query: 339 LTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI-SMEPECI--YVGFNTMDLELIYSG 395
L L L+ N + ++ T L SL L L +N I S+ C T+DL Y
Sbjct: 179 LQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGLDNLETLDLNYNYLD 238
Query: 396 VWRHSTLLIPVMLSLCTRSSVVT 418
+ + +P + L S+ ++
Sbjct: 239 EFPQAIKALPSLKELGFHSNSIS 261
Score = 53 (23.7 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 12/47 (25%), Positives = 22/47 (46%)
Query: 646 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
+L+ +S+ NQ S ++ GL L L N I + +F+ +
Sbjct: 366 ALEEISLQRNQISLIKENTFQGLTSLRILDLSRNLIREIHSGAFAKL 412
Score = 47 (21.6 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 10/46 (21%), Positives = 24/46 (52%)
Query: 647 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L+ L +++N + + G L +S NQI ++++++F +
Sbjct: 345 LRTLDLSYNNIRDLP--SFNGCRALEEISLQRNQISLIKENTFQGL 388
Score = 41 (19.5 bits), Expect = 5.4e-14, Sum P(2) = 5.4e-14
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L ++ L ++ N+ +S L GL++L L + D L F+N+
Sbjct: 412 LGTITNLDVSFNELTSFPTEGLNGLNQL-KLVGNFKLKDALAARDFANL 459
>UNIPROTKB|Q9Z2H4 [details] [associations]
symbol:Lgr4 "Leucine-rich repeat-containing G-protein
coupled receptor 4" species:10116 "Rattus norvegicus" [GO:0016500
"protein-hormone receptor activity" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450 EMBL:AF061443
RGD:628615 GO:GO:0016021 GO:GO:0005886 GO:GO:0045892 GO:GO:0045893
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030539
GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 GO:GO:0061290 GO:GO:0072282 CTD:55366
HOVERGEN:HBG031675 KO:K04309 OrthoDB:EOG476JZH GO:GO:0072202
GO:GO:0072224 HOGENOM:HOG000231829 IPI:IPI00339207
RefSeq:NP_775450.1 UniGene:Rn.162671 ProteinModelPortal:Q9Z2H4
PhosphoSite:Q9Z2H4 GeneID:286994 KEGG:rno:286994 UCSC:RGD:628615
InParanoid:Q9Z2H4 NextBio:625274 ArrayExpress:Q9Z2H4
Genevestigator:Q9Z2H4 GermOnline:ENSRNOG00000005715 Uniprot:Q9Z2H4
Length = 951
Score = 224 (83.9 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 69/211 (32%), Positives = 104/211 (49%)
Query: 173 LDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSV 232
LD+S N + +L +FK L L L+ N L + L+ L L+VL LQ N+L
Sbjct: 62 LDISMNNITQLPEDAFKSFPFLEELQLAGNDLSLIHPKALSGLKELKVLTLQNNQLRTVP 121
Query: 233 VAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLT 292
A+ GL ++ L L N + + + L L+ L + N + V L+ L L
Sbjct: 122 SEAIHGLSALQSLRLDANHITS-VPEDSFEGLVQLRHLWLDDNSLTEVPVRPLSNLPTLQ 180
Query: 293 SLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRAL 352
+L+ N I + D +F LS+L L L +N+I ++S L NL TLDL++N+L
Sbjct: 181 ALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGLDNLETLDLNYNYLDEF 240
Query: 353 TQDLITPLKSLQELRLDDNDISMEPECIYVG 383
Q I L SL+EL N IS+ P+ + G
Sbjct: 241 PQ-AIKALPSLKELGFHSNSISVIPDGAFGG 270
Score = 199 (75.1 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 85/312 (27%), Positives = 141/312 (45%)
Query: 79 SDLYAIS-ESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVT-LHGLVISSGELKNISDG 136
+DL I ++L GL+ + +L + + +P + + G++ L L + + + ++ +
Sbjct: 91 NDLSLIHPKALSGLK---ELKVLTLQNNQLRTVPSEAIHGLSALQSLRLDANHITSVPED 147
Query: 137 AFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNF 196
+F GL L+ L L +N L+ VP L+ L P L L L+ N + + + +F LSSL
Sbjct: 148 SFEGLVQ-LRHLWLDDNSLTEVPVRPLSNL-PTLQALTLALNNISSIPDFAFTNLSSLVV 205
Query: 197 LDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAG-P 255
L L NK+ +LSQ C L L L L N L A++ L S+ +L N ++ P
Sbjct: 206 LHLHNNKIKSLSQHCFDGLDNLETLDLNYNYLD-EFPQAIKALPSLKELGFHSNSISVIP 264
Query: 256 LGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTL 315
G L L+ + + N S V A L L L + V + L
Sbjct: 265 DGAFGGNPL--LRTIHLYDNPLSFVGNSAFHNLSDLHCLVIRGASL-VQWFPNLTGTVHL 321
Query: 316 SHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISM 375
L L +I ++ + L TLDLS+N +R L ++L+E+ L N IS+
Sbjct: 322 ESLTLTGTKISSIPDDLCQNQKMLRTLDLSYNNIRDLPS--FNGCRALEEISLQRNQISL 379
Query: 376 EPECIYVGFNTM 387
E + G ++
Sbjct: 380 IKENTFQGLTSL 391
Score = 186 (70.5 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 71/275 (25%), Positives = 125/275 (45%)
Query: 100 LDCTLSNVTVLPG-KFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVV 158
L L+N++ +P F +L L + + ++K++S F GL + L+ L L N L
Sbjct: 182 LTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGLDN-LETLDLNYNYLDEF 240
Query: 159 PTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTL 218
P A+ L P+L L N + + + +F G L + L N L + L L
Sbjct: 241 P-QAIKAL-PSLKELGFHSNSISVIPDGAFGGNPLLRTIHLYDNPLSFVGNSAFHNLSDL 298
Query: 219 RVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFS 278
L ++G L V L G + L L+ ++ + L+ L +++N
Sbjct: 299 HCLVIRGASL-VQWFPNLTGTVHLESLTLTGTKISS-IPDDLCQNQKMLRTLDLSYNNIR 356
Query: 279 SVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSN 338
+ + G L +S NQI ++++++F+ L++L LDL+ N I + + A L
Sbjct: 357 DLP--SFNGCRALEEISLQRNQISLIKENTFQGLTSLRILDLSRNLIREIHSGAFAKLGT 414
Query: 339 LTTLDLSHNFLRAL-TQDL--ITPLKSLQELRLDD 370
+T LD+S N L + T+ L + LK + +L D
Sbjct: 415 ITNLDVSFNELTSFPTEGLNGLNQLKLVGNFKLKD 449
Score = 186 (70.5 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 86/323 (26%), Positives = 134/323 (41%)
Query: 71 TLRCTANKSDLYAISE-SLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGE 129
+LR AN + ++ E S GL + L D +L+ V V P L TL L ++
Sbjct: 133 SLRLDANH--ITSVPEDSFEGLVQLRHLWLDDNSLTEVPVRPLSNLP--TLQALTLALNN 188
Query: 130 LKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFK 189
+ +I D AF LSS L L L NN + + L NL+ LDL++N L + + K
Sbjct: 189 ISSIPDFAFTNLSS-LVVLHLHNNKIKSLSQHCFDGL-DNLETLDLNYNYLDEFPQ-AIK 245
Query: 190 GLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSH 249
L SL L N + + LR + L N L+ +A L DL
Sbjct: 246 ALPSLKELGFHSNSISVIPDGAFGGNPLLRTIHLYDNPLSFVGNSAFHNLS-----DLHC 300
Query: 250 NLLAGPLGPSTVPRLSS---LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLED 306
++ G P L+ L+ L++ + SS+ L +L +N I L
Sbjct: 301 LVIRGASLVQWFPNLTGTVHLESLTLTGTKISSIPDDLCQNQKMLRTLDLSYNNIRDLP- 359
Query: 307 HSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQEL 366
SF L + L N+I + + L++L LDLS N +R + L ++ L
Sbjct: 360 -SFNGCRALEEISLQRNQISLIKENTFQGLTSLRILDLSRNLIREIHSGAFAKLGTITNL 418
Query: 367 RLDDNDISMEPECIYVGFNTMDL 389
+ N+++ P G N + L
Sbjct: 419 DVSFNELTSFPTEGLNGLNQLKL 441
Score = 164 (62.8 bits), Expect = 9.8e-09, Sum P(2) = 9.8e-09
Identities = 57/203 (28%), Positives = 91/203 (44%)
Query: 219 RVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFS 278
+ L + N +T A + + +L L+ N L+ + P + L LKVL++ +NQ
Sbjct: 60 QALDISMNNITQLPEDAFKSFPFLEELQLAGNDLS-LIHPKALSGLKELKVLTLQNNQLR 118
Query: 279 SVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSN 338
+V A+ GL L SL N I + + SF L L HL L N + V L++L
Sbjct: 119 TVPSEAIHGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPVRPLSNLPT 178
Query: 339 LTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI-SMEPECI--YVGFNTMDLELIYSG 395
L L L+ N + ++ T L SL L L +N I S+ C T+DL Y
Sbjct: 179 LQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGLDNLETLDLNYNYLD 238
Query: 396 VWRHSTLLIPVMLSLCTRSSVVT 418
+ + +P + L S+ ++
Sbjct: 239 EFPQAIKALPSLKELGFHSNSIS 261
Score = 53 (23.7 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 12/47 (25%), Positives = 22/47 (46%)
Query: 646 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
+L+ +S+ NQ S ++ GL L L N I + +F+ +
Sbjct: 366 ALEEISLQRNQISLIKENTFQGLTSLRILDLSRNLIREIHSGAFAKL 412
Score = 47 (21.6 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 10/46 (21%), Positives = 24/46 (52%)
Query: 647 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L+ L +++N + + G L +S NQI ++++++F +
Sbjct: 345 LRTLDLSYNNIRDLP--SFNGCRALEEISLQRNQISLIKENTFQGL 388
Score = 41 (19.5 bits), Expect = 5.4e-14, Sum P(2) = 5.4e-14
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L ++ L ++ N+ +S L GL++L L + D L F+N+
Sbjct: 412 LGTITNLDVSFNELTSFPTEGLNGLNQL-KLVGNFKLKDALAARDFANL 459
>UNIPROTKB|E1C5R1 [details] [associations]
symbol:LOC428618 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005614
"interstitial matrix" evidence=IEA] [GO:0005615 "extracellular
space" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0030512 "negative regulation of
transforming growth factor beta receptor signaling pathway"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005615
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0030198 GO:GO:0000122 InterPro:IPR000372 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GO:GO:0030512 GO:GO:0005614
GeneTree:ENSGT00700000104286 OMA:RRLYISH EMBL:AADN02001982
IPI:IPI00573069 RefSeq:XP_426175.3 ProteinModelPortal:E1C5R1
Ensembl:ENSGALT00000024034 GeneID:428618 KEGG:gga:428618
Uniprot:E1C5R1
Length = 512
Score = 224 (83.9 bits), Expect = 3.6e-15, Sum P(2) = 3.6e-15
Identities = 95/310 (30%), Positives = 143/310 (46%)
Query: 64 CACDLPHTLRCTANKSDLYAISESLRGLE-PDERVSLLDCTLSNVTVLPGKFLEGVTLHG 122
C+CD +++C Y SE R + R+ + + + + F L
Sbjct: 25 CSCDPAQSVQC-------YRASEIPREIPFTTRRLYISHSKIKQLQITD--FRRMSALEE 75
Query: 123 LVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYK 182
LV+S ++I + F LSS L++L L N L +P L L+ L L+ N +
Sbjct: 76 LVLSCSGTESIENNTFKALSS-LKSLELYKNQLKQIPIF----LPSGLEILKLADNSINT 130
Query: 183 LENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSV 242
L T F+GL L LD+ N + TL + L L+ L L GN + V A L+ L +
Sbjct: 131 LHATDFEGLVKLRVLDIRNNLIATLPSSAFSSLCNLQSLILDGNNMEF-VSAPLK-LPRL 188
Query: 243 TDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDK-LTSLSCHHNQI 301
L ++ N L L S +L+ LS++ N + V L K L SL NQ+
Sbjct: 189 KYLSMADNRL-NSLPASFFASFGNLQFLSLSGNFLTKVP----LDLPKSLLSLKLDKNQL 243
Query: 302 DVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLK 361
++ + L LS L+ N++ +V GA L L NLTTL+LS N L+AL L P +
Sbjct: 244 KTVQLQDMKHLENLSEFFLSENQLTSVDGAHL--LPNLTTLELSKNQLQALPLRL--PGR 299
Query: 362 SLQELRLDDN 371
LQ+L +N
Sbjct: 300 -LQKLDCSNN 308
Score = 201 (75.8 bits), Expect = 3.6e-12, Sum P(2) = 3.6e-12
Identities = 80/279 (28%), Positives = 128/279 (45%)
Query: 97 VSLLDCTLSNVTVLPGKFLEG-VTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLL 155
+ +L +++ L EG V L L I + + + AF L + LQ+L L N +
Sbjct: 118 LEILKLADNSINTLHATDFEGLVKLRVLDIRNNLIATLPSSAFSSLCN-LQSLILDGNNM 176
Query: 156 SVVPTSALAPLA-PNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAP 214
V APL P L L ++ N+L L + F +L FL LS N L + D
Sbjct: 177 EFVS----APLKLPRLKYLSMADNRLNSLPASFFASFGNLQFLSLSGNFLTKVPLDLPKS 232
Query: 215 LVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAH 274
L++L+ L N+L + ++ L ++++ LS N L G +P L++L+ ++
Sbjct: 233 LLSLK---LDKNQLKTVQLQDMKHLENLSEFFLSENQLTSVDGAHLLPNLTTLE---LSK 286
Query: 275 NQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLA 334
NQ ++ L G +L L C +N I + F+ L L HL L +N + +L
Sbjct: 287 NQLQALPL-RLPG--RLQKLDCSNNLIQRVTAQEFQGLQDLKHLFLDNNAVSMFEAGALQ 343
Query: 335 HLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 373
H + L+ L L N L ++ L P +L L L NDI
Sbjct: 344 HCAQLSNLALEQNLLISIPLRL--P-DTLARLDLKGNDI 379
Score = 181 (68.8 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 87/295 (29%), Positives = 130/295 (44%)
Query: 84 ISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVT-------LHGLVISSGELKNISDG 136
I +L P S L C L ++ +L G +E V+ L L ++ L ++
Sbjct: 147 IRNNLIATLPSSAFSSL-CNLQSL-ILDGNNMEFVSAPLKLPRLKYLSMADNRLNSLPAS 204
Query: 137 AFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNF 196
F + LQ L L N L+ VP L +L L L NQL ++ K L +L+
Sbjct: 205 FFASFGN-LQFLSLSGNFLTKVPLD----LPKSLLSLKLDKNQLKTVQLQDMKHLENLSE 259
Query: 197 LDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPL 256
LS N+L ++ L P +T L L N+L ++ L G + LD S+NL+ +
Sbjct: 260 FFLSENQLTSVDGAHLLPNLT--TLELSKNQLQ-ALPLRLPG--RLQKLDCSNNLIQR-V 313
Query: 257 GPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLS 316
L LK L + +N S GAL +L++L+ N +L R TL+
Sbjct: 314 TAQEFQGLQDLKHLFLDNNAVSMFEAGALQHCAQLSNLALEQN---LLISIPLRLPDTLA 370
Query: 317 HLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
LDL N I V L L L L+L +N + AL + ++ L L+ L LD N
Sbjct: 371 RLDLKGNDIEDVGEQELKDLKQLQVLNLRNNKISALDRKVLEYLPRLRHLYLDGN 425
Score = 174 (66.3 bits), Expect = 8.5e-10, P = 8.5e-10
Identities = 80/281 (28%), Positives = 124/281 (44%)
Query: 96 RVSLLDCTLSNVTVLPGKFLEGV-TLHGLVISSGELKNISDGAFIGLSSP-LQALGLPNN 153
++ +LD + + LP + L L++ ++ +S L P L+ L + +N
Sbjct: 141 KLRVLDIRNNLIATLPSSAFSSLCNLQSLILDGNNMEFVS----APLKLPRLKYLSMADN 196
Query: 154 LLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLA 213
L+ +P S A NL L LS N L K+ K L SL L N+L T+ +
Sbjct: 197 RLNSLPASFFASFG-NLQFLSLSGNFLTKVPLDLPKSLLSLK---LDKNQLKTVQLQDMK 252
Query: 214 PLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIA 273
L L L N+LT SV A L ++T L+LS N L P +P L+ L +
Sbjct: 253 HLENLSEFFLSENQLT-SVDGA-HLLPNLTTLELSKNQLQAL--PLRLP--GRLQKLDCS 306
Query: 274 HNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASL 333
+N V GL L L +N + + E + + + LS+L L N ++++ L
Sbjct: 307 NNLIQRVTAQEFQGLQDLKHLFLDNNAVSMFEAGALQHCAQLSNLALEQNLLISIP---L 363
Query: 334 AHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 374
L LDL N + + + + LK LQ L L +N IS
Sbjct: 364 RLPDTLARLDLKGNDIEDVGEQELKDLKQLQVLNLRNNKIS 404
Score = 127 (49.8 bits), Expect = 0.00012, P = 0.00012
Identities = 59/229 (25%), Positives = 93/229 (40%)
Query: 60 KNDLCACD----LPHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFL 115
+N L + D LP+ +K+ L A+ L G R+ LDC+ + + + +
Sbjct: 264 ENQLTSVDGAHLLPNLTTLELSKNQLQALPLRLPG-----RLQKLDCSNNLIQRVTAQEF 318
Query: 116 EGVT-LHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLD 174
+G+ L L + + + GA + + L L L NLL +P L L RLD
Sbjct: 319 QGLQDLKHLFLDNNAVSMFEAGA-LQHCAQLSNLALEQNLLISIPLR----LPDTLARLD 373
Query: 175 LSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSV-V 233
L N + + K L L L+L NK+ L + L L LR L L GN + +
Sbjct: 374 LKGNDIEDVGEQELKDLKQLQVLNLRNNKISALDRKVLEYLPRLRHLYLDGNPWNCTCDL 433
Query: 234 AALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRR 282
+G+ D+ A P +SS K+L + SS +
Sbjct: 434 LRTRGVLMAKGTDVRGGQCAAPAESRGESWMSSKKILQQCEDILSSTEK 482
Score = 43 (20.2 bits), Expect = 3.6e-15, Sum P(2) = 3.6e-15
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 679
L LK L + +N S GAL +L++L+ N
Sbjct: 321 LQDLKHLFLDNNAVSMFEAGALQHCAQLSNLALEQN 356
Score = 39 (18.8 bits), Expect = 9.4e-15, Sum P(2) = 9.4e-15
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 643 LLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLE 685
L +L L + N V L L +L L+ +N+I L+
Sbjct: 365 LPDTLARLDLKGNDIEDVGEQELKDLKQLQVLNLRNNKISALD 407
>UNIPROTKB|O94813 [details] [associations]
symbol:SLIT2 "Slit homolog 2 protein" species:9606 "Homo
sapiens" [GO:0001656 "metanephros development" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0045499 "chemorepellent activity" evidence=IEA] [GO:0060763
"mammary duct terminal end bud growth" evidence=IEA] [GO:0001657
"ureteric bud development" evidence=IMP] [GO:0050929 "induction of
negative chemotaxis" evidence=IDA] [GO:0050772 "positive regulation
of axonogenesis" evidence=TAS] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0031290
"retinal ganglion cell axon guidance" evidence=IDA] [GO:0009986
"cell surface" evidence=IDA] [GO:0048495 "Roundabout binding"
evidence=IPI] [GO:0043237 "laminin-1 binding" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0050919 "negative chemotaxis" evidence=IDA;IMP] [GO:0030336
"negative regulation of cell migration" evidence=IMP;IDA]
[GO:0048754 "branching morphogenesis of an epithelial tube"
evidence=IDA;IMP] [GO:0010593 "negative regulation of lamellipodium
assembly" evidence=IDA] [GO:0005095 "GTPase inhibitor activity"
evidence=IDA] [GO:0051058 "negative regulation of small GTPase
mediated signal transduction" evidence=IDA] [GO:0016020 "membrane"
evidence=NAS] [GO:0010596 "negative regulation of endothelial cell
migration" evidence=IDA] [GO:0043116 "negative regulation of
vascular permeability" evidence=IDA] [GO:0005509 "calcium ion
binding" evidence=NAS] [GO:0090024 "negative regulation of
neutrophil chemotaxis" evidence=IDA] [GO:0030837 "negative
regulation of actin filament polymerization" evidence=IDA]
[GO:0001933 "negative regulation of protein phosphorylation"
evidence=IDA] [GO:0002689 "negative regulation of leukocyte
chemotaxis" evidence=IDA] [GO:0043394 "proteoglycan binding"
evidence=IPI] [GO:0048846 "axon extension involved in axon
guidance" evidence=IDA] [GO:0071504 "cellular response to heparin"
evidence=IDA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IMP] [GO:0090260 "negative regulation of retinal
ganglion cell axon guidance" evidence=IDA] [GO:0061364 "apoptotic
process involved in luteolysis" evidence=IEP] [GO:0032870 "cellular
response to hormone stimulus" evidence=IEP] [GO:0051414 "response
to cortisol stimulus" evidence=IEP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008045 "motor neuron axon guidance"
evidence=IDA] [GO:0021836 "chemorepulsion involved in postnatal
olfactory bulb interneuron migration" evidence=IDA] [GO:0008201
"heparin binding" evidence=IDA] [GO:0007411 "axon guidance"
evidence=IDA;TAS] [GO:0021834 "chemorepulsion involved in embryonic
olfactory bulb interneuron precursor migration" evidence=IDA]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0005886
"plasma membrane" evidence=TAS] [GO:0035385 "Roundabout signaling
pathway" evidence=IC;IMP] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IMP] [GO:0030308
"negative regulation of cell growth" evidence=IMP] [GO:0090027
"negative regulation of monocyte chemotaxis" evidence=ISS]
[GO:0014912 "negative regulation of smooth muscle cell migration"
evidence=IDA] [GO:0002042 "cell migration involved in sprouting
angiogenesis" evidence=IMP] [GO:0071672 "negative regulation of
smooth muscle cell chemotaxis" evidence=IDA] [GO:0071676 "negative
regulation of mononuclear cell migration" evidence=IDA] [GO:0090288
"negative regulation of cellular response to growth factor
stimulus" evidence=IDA] [GO:0021972 "corticospinal neuron axon
guidance through spinal cord" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005886 GO:GO:0005737 Reactome:REACT_111045 GO:GO:0008285
GO:GO:0005615 GO:GO:0042803 GO:GO:0009986 GO:GO:0030308
GO:GO:0001701 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0008201
Pathway_Interaction_DB:glypican_1pathway GO:GO:0005509
GO:GO:0043116 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0008045 GO:GO:0071504
GO:GO:0050772 GO:GO:0005095 Reactome:REACT_96538 GO:GO:0016337
PROSITE:PS01186 GO:GO:0032870 GO:GO:0030837 GO:GO:0010629
InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 GO:GO:0071672 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 EMBL:CH471069 GO:GO:0001656
GO:GO:0010596 GO:GO:0001657 GO:GO:0001933 GO:GO:0048754
GO:GO:0071676 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
GO:GO:0060763 GO:GO:0070100 GO:GO:0090288 GO:GO:0043237
GO:GO:0033563 GO:GO:0045499 GO:GO:0002042 Pfam:PF01463
GO:GO:0090027 GO:GO:0010593 GO:GO:0051414 GO:GO:0090260 PDB:2V9T
PDBsum:2V9T GO:GO:0021836 GO:GO:0035385 GO:GO:0061364
HOGENOM:HOG000116120 HOVERGEN:HBG057959 EMBL:AB017168 EMBL:AF055585
EMBL:AF133270 EMBL:BC117190 EMBL:BC143978 IPI:IPI00006288
IPI:IPI00220114 IPI:IPI00335003 RefSeq:NP_004778.1 UniGene:Hs.29802
PDB:2V70 PDB:2V9S PDB:2WFH PDBsum:2V70 PDBsum:2V9S PDBsum:2WFH
ProteinModelPortal:O94813 SMR:O94813 DIP:DIP-38198N IntAct:O94813
MINT:MINT-6768470 STRING:O94813 PhosphoSite:O94813 PaxDb:O94813
PRIDE:O94813 Ensembl:ENST00000503823 Ensembl:ENST00000503837
Ensembl:ENST00000504154 GeneID:9353 KEGG:hsa:9353 UCSC:uc003gpr.1
UCSC:uc003gps.1 CTD:9353 GeneCards:GC04P020254 HGNC:HGNC:11086
HPA:CAB007590 HPA:HPA019511 HPA:HPA023088 MIM:603746
neXtProt:NX_O94813 PharmGKB:PA35939 InParanoid:O94813 KO:K06839
PhylomeDB:O94813 EvolutionaryTrace:O94813 GenomeRNAi:9353
NextBio:35025 ArrayExpress:O94813 Bgee:O94813 CleanEx:HS_SLIT2
Genevestigator:O94813 GermOnline:ENSG00000145147 GO:GO:0021972
GO:GO:0050929 GO:GO:0090024 GO:GO:0051058 Uniprot:O94813
Length = 1529
Score = 183 (69.5 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 81/336 (24%), Positives = 147/336 (43%)
Query: 67 DLP-HTLRCTANKSDLYAISES-LRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLV 124
++P +T R N +++ I+++ GL + L++ +S T+ G F + L L
Sbjct: 52 NIPRNTERLDLNGNNITRITKTDFAGLRHLRVLQLMENKIS--TIERGAFQDLKELERLR 109
Query: 125 ISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLE 184
++ L+ + F+G ++ L L L N + +P A A ++ L L +NQ+ +E
Sbjct: 110 LNRNHLQLFPELLFLG-TAKLYRLDLSENQIQAIPRKAFRG-AVDIKNLQLDYNQISCIE 167
Query: 185 NTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSV-VAALQG-LRSV 242
+ +F+ L L L L+ N + LS + LR RL N L +A L LR
Sbjct: 168 DGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQR 227
Query: 243 TDLDLSHNLLAGP--LGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQ 300
+ L + GP L V + + + H F + + + L + +C +N
Sbjct: 228 PRVGL-YTQCMGPSHLRGHNVAEVQKREFVCSGHQSFMAP---SCSVLHCPAACTCSNNI 283
Query: 301 IDV----LEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDL 356
+D L + T++ + L N I + + + L +DLS+N + L D
Sbjct: 284 VDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDA 343
Query: 357 ITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELI 392
L+SL L L N I+ P+ ++ G ++ L L+
Sbjct: 344 FQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLL 379
Score = 163 (62.4 bits), Expect = 3.6e-15, Sum P(2) = 3.6e-15
Identities = 44/137 (32%), Positives = 70/137 (51%)
Query: 141 LSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLS 200
L + + L N + V+P A +P L R+DLS+NQ+ +L +F+GL SLN L L
Sbjct: 298 LPETITEIRLEQNTIKVIPPGAFSPYK-KLRRIDLSNNQISELAPDAFQGLRSLNSLVLY 356
Query: 201 YNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPST 260
NK+ L + L +L++L L N++ V A Q L ++ L L N L + T
Sbjct: 357 GNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQ-TIAKGT 415
Query: 261 VPRLSSLKVLSIAHNQF 277
L +++ + +A N F
Sbjct: 416 FSPLRAIQTMHLAQNPF 432
Score = 140 (54.3 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 38/131 (29%), Positives = 66/131 (50%)
Query: 148 LGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTL 207
L L NN +V+ + + P L +++ S+N++ +E +F+G S +N + L+ N+L +
Sbjct: 538 LRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENV 597
Query: 208 SQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSL 267
L +L+ L L+ NR+T + GL SV L L N + + P L SL
Sbjct: 598 QHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQIT-TVAPGAFDTLHSL 656
Query: 268 KVLSIAHNQFS 278
L++ N F+
Sbjct: 657 STLNLLANPFN 667
Score = 133 (51.9 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 76/318 (23%), Positives = 126/318 (39%)
Query: 67 DLPHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEG-VTLHGLVI 125
DL R N++ L E L ++ LD + + + +P K G V + L +
Sbjct: 101 DLKELERLRLNRNHLQLFPELL--FLGTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQL 158
Query: 126 SSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLEN 185
++ I DGAF L L+ L L NN ++ + ++ + P L L N LY +
Sbjct: 159 DYNQISCIEDGAFRALRD-LEVLTLNNNNITRLSVASFNHM-PKLRTFRLHSNNLYC--D 214
Query: 186 TSFKGLSSLNFLDLSYNKLMTLSQDCLAP--LVTLRVLRLQGNRLTVS-----VVAALQG 238
LS L + L C+ P L V +Q S + +
Sbjct: 215 CHLAWLSDW----LRQRPRVGLYTQCMGPSHLRGHNVAEVQKREFVCSGHQSFMAPSCSV 270
Query: 239 LRSVTDLDLSHNLL-AGPLGPSTVP-RL-SSLKVLSIAHNQFSSVRRGALAGLDKLTSLS 295
L S+N++ G + +P L ++ + + N + GA + KL +
Sbjct: 271 LHCPAACTCSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRID 330
Query: 296 CHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQD 355
+NQI L +F+ L +L+ L L N+I + + L +L L L+ N + L D
Sbjct: 331 LSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVD 390
Query: 356 LITPLKSLQELRLDDNDI 373
L +L L L DN +
Sbjct: 391 AFQDLHNLNLLSLYDNKL 408
Score = 130 (50.8 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 36/131 (27%), Positives = 62/131 (47%)
Query: 241 SVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQ 300
++T++ L N + + P L+ + +++NQ S + A GL L SL + N+
Sbjct: 301 TITEIRLEQNTIK-VIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 359
Query: 301 IDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPL 360
I L F L +L L L N+I + + L NL L L N L+ + + +PL
Sbjct: 360 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPL 419
Query: 361 KSLQELRLDDN 371
+++Q + L N
Sbjct: 420 RAIQTMHLAQN 430
Score = 123 (48.4 bits), Expect = 7.6e-10, Sum P(2) = 7.6e-10
Identities = 33/103 (32%), Positives = 53/103 (51%)
Query: 221 LRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSV 280
L L GN+ T+ V L + +T +DLS+N ++ L + ++ L L +++N+ +
Sbjct: 759 LYLDGNQFTL-VPKELSNYKHLTLIDLSNNRIS-TLSNQSFSNMTQLLTLILSYNRLRCI 816
Query: 281 RRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 323
GL L LS H N I V+ + +F LS LSHL + N
Sbjct: 817 PPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGAN 859
Score = 121 (47.7 bits), Expect = 3.6e-15, Sum P(2) = 3.6e-15
Identities = 31/72 (43%), Positives = 43/72 (59%)
Query: 310 RALSTLSHL---DLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQEL 366
+ LS HL DL++NRI +S S ++++ L TL LS+N LR + LKSL+ L
Sbjct: 771 KELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLL 830
Query: 367 RLDDNDISMEPE 378
L NDIS+ PE
Sbjct: 831 SLHGNDISVVPE 842
Score = 121 (47.7 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 45/214 (21%), Positives = 90/214 (42%)
Query: 175 LSHNQLYKLENTSFK-GLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVS-- 231
L++ ++ ++++ F+ F+ + + LS DC A L R +G + S
Sbjct: 463 LANKRIGQIKSKKFRCSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQ 522
Query: 232 -VVAALQGLRSVT-DLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLD 289
+ + + T +L L++N +L L+ ++ ++N+ + + GA G
Sbjct: 523 KLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGAS 582
Query: 290 KLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFL 349
+ + N+++ ++ F+ L +L L L NRI V S LS++ L L N +
Sbjct: 583 GVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQI 642
Query: 350 RALTQDLITPLKSLQELRLDDNDISMEPECIYVG 383
+ L SL L L N + ++G
Sbjct: 643 TTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLG 676
Score = 117 (46.2 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 76/302 (25%), Positives = 125/302 (41%)
Query: 84 ISESLRGLEPD-ERVSLLDCTLSNVTVLPGK-FLEGVTLHGLVISSGELKNISDGAFIGL 141
IS RG D + + L +++ + P FL L+ L +S +++ I AF G
Sbjct: 91 ISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTAKLYRLDLSENQIQAIPRKAFRG- 149
Query: 142 SSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSY 201
+ ++ L L N +S + A L +L+ L L++N + +L SF + L L
Sbjct: 150 AVDIKNLQLDYNQISCIEDGAFRALR-DLEVLTLNNNNITRLSVASFNHMPKLRTFRLHS 208
Query: 202 NKLMTLSQDC-LAPLVT-LRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPS 259
N L DC LA L LR G + L+G +V ++ + +G
Sbjct: 209 NNLYC---DCHLAWLSDWLRQRPRVGLYTQCMGPSHLRG-HNVAEVQKREFVCSGHQS-F 263
Query: 260 TVPRLSSLK--VLSIAHNQFSSVRRGALAGL-----DKLTSLSCHHNQIDVLEDHSFRAL 312
P S L N R L + + +T + N I V+ +F
Sbjct: 264 MAPSCSVLHCPAACTCSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPY 323
Query: 313 STLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDND 372
L +DL++N+I ++ + L +L +L L N + L + L L SLQ L L+ N
Sbjct: 324 KKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANK 383
Query: 373 IS 374
I+
Sbjct: 384 IN 385
Score = 111 (44.1 bits), Expect = 7.6e-10, Sum P(2) = 7.6e-10
Identities = 49/175 (28%), Positives = 78/175 (44%)
Query: 64 CACDLPHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGL 123
C C+ T+ C+ K L I E + + R++ + T+ T G F + L +
Sbjct: 510 CRCE-GTTVDCSNQK--LNKIPEHIPQYTAELRLNNNEFTVLEAT---GIFKKLPQLRKI 563
Query: 124 VISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKL 183
S+ ++ +I +GAF G S + L L +N L V L +L L L N++ +
Sbjct: 564 NFSNNKITDIEEGAFEGASGVNEIL-LTSNRLENVQHKMFKGLE-SLKTLMLRSNRITCV 621
Query: 184 ENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQG 238
N SF GLSS+ L L N++ T++ L +L L L N + A G
Sbjct: 622 GNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLG 676
Score = 99 (39.9 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 30/116 (25%), Positives = 54/116 (46%)
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 317
P +PR + L + NQF+ V + L+ LT + +N+I L + SF ++ L
Sbjct: 749 PKGIPR--DVTELYLDGNQFTLVPK-ELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLT 805
Query: 318 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 373
L L++NR+ + + L +L L L N + + + L +L L + N +
Sbjct: 806 LILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPL 861
Score = 64 (27.6 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 20/94 (21%), Positives = 44/94 (46%)
Query: 601 CRTPRNSTIHHHACFIPVAQQEDDINRNNSDSRYVKLQATTIL--LSSLKVLSIAHNQFS 658
C + + I H IP Q ++ NN++ + L+AT I L L+ ++ ++N+ +
Sbjct: 519 CSNQKLNKIPEH---IP--QYTAELRLNNNE--FTVLEATGIFKKLPQLRKINFSNNKIT 571
Query: 659 SVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
+ GA G + + N+++ ++ F +
Sbjct: 572 DIEEGAFEGASGVNEILLTSNRLENVQHKMFKGL 605
Score = 63 (27.2 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L SLK L + N+ + V + GL + LS + NQI + +F +
Sbjct: 605 LESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTL 653
Score = 61 (26.5 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 25/98 (25%), Positives = 45/98 (45%)
Query: 292 TSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRA 351
T + C + + VL R ++ L +LD N+ V L++ +LT +DLS+N +
Sbjct: 736 TVVRCSNKGLKVLPKGIPRDVTEL-YLD--GNQFTLVP-KELSNYKHLTLIDLSNNRIST 791
Query: 352 LTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDL 389
L+ + + L L L N + P + G ++ L
Sbjct: 792 LSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRL 829
Score = 59 (25.8 bits), Expect = 6.8e-11, Sum P(2) = 6.8e-11
Identities = 13/49 (26%), Positives = 26/49 (53%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
++ L L +++N+ + GL L LS H N I V+ + +F+++
Sbjct: 800 MTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDL 848
Score = 57 (25.1 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 13/32 (40%), Positives = 22/32 (68%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLS 675
LSS+++LS+ NQ ++V GA L L++L+
Sbjct: 629 LSSVRLLSLYDNQITTVAPGAFDTLHSLSTLN 660
Score = 57 (25.1 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 655 NQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
NQF+ V + L+ LT + +N+I L + SFSN+
Sbjct: 764 NQFTLVPK-ELSNYKHLTLIDLSNNRISTLSNQSFSNM 800
Score = 54 (24.1 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFS 690
L SL++L + N+ + +R A L L LS + N++ + +FS
Sbjct: 371 LFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFS 417
Score = 48 (22.0 bits), Expect = 9.2e-10, Sum P(2) = 9.2e-10
Identities = 11/45 (24%), Positives = 22/45 (48%)
Query: 645 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
S + + + N+ +V+ GL+ L +L N+I + + SF
Sbjct: 582 SGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSF 626
Score = 44 (20.5 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L SL L + N+ + + + GL L L + N+I+ L +F ++
Sbjct: 347 LRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDL 395
Score = 43 (20.2 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 11/46 (23%), Positives = 24/46 (52%)
Query: 650 LSIAHNQFSSVRR-GALAGLDKLTSLSCHHNQIDVLEDHSFSNVIG 694
L + +N+F+ + G L +L ++ +N+I +E+ +F G
Sbjct: 538 LRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASG 583
>UNIPROTKB|E1BPK8 [details] [associations]
symbol:LRRC4B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051965 "positive regulation of synapse assembly"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026883
PROSITE:PS50835 PROSITE:PS51450 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:94030 KO:K16360 OMA:NNTTCCA
PANTHER:PTHR24369:SF7 EMBL:DAAA02047507 IPI:IPI00733296
RefSeq:NP_001179210.1 UniGene:Bt.88262 ProteinModelPortal:E1BPK8
Ensembl:ENSBTAT00000043330 GeneID:539607 KEGG:bta:539607
NextBio:20878103 ArrayExpress:E1BPK8 Uniprot:E1BPK8
Length = 711
Score = 225 (84.3 bits), Expect = 4.0e-15, P = 4.0e-15
Identities = 68/224 (30%), Positives = 107/224 (47%)
Query: 148 LGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTL 207
L L N + V+ T L +L+ L LS N + K+E +F GL SLN L+L N+L T+
Sbjct: 91 LNLQENGIQVIRTDTFKHLR-HLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTV 149
Query: 208 SQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSL 267
L LR L L+ N + A + S+ LDL + + L +L
Sbjct: 150 PTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNL 209
Query: 268 KVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVA 327
+ L++ + L L +L L N++D++ SF+ L++L L L H ++
Sbjct: 210 RYLNLGMCNLKDIPN--LTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVAT 267
Query: 328 VSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
+ + L +L L+LSHN L +L DL TPL L+ + L+ N
Sbjct: 268 IERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHN 311
Score = 190 (71.9 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 65/202 (32%), Positives = 96/202 (47%)
Query: 123 LVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYK 182
L +S ++ I GAF GL S L L L +N L+ VPT A L+ L L L +N +
Sbjct: 115 LQLSKNLVRKIEVGAFNGLPS-LNTLELFDNRLTTVPTQAFEYLS-KLRELWLRNNPIES 172
Query: 183 LENTSFKGLSSLNFLDLS-YNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRS 241
+ + +F + SL LDL +L +S+ LV LR L L + + L L
Sbjct: 173 IPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNL--GMCNLKDIPNLTALVR 230
Query: 242 VTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 301
+ +L+LS N L + P + L+SL+ L + H Q +++ R A L L L+ HN +
Sbjct: 231 LEELELSGNRL-DLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNL 289
Query: 302 DVLEDHSFRALSTLSHLDLAHN 323
L F L L + L HN
Sbjct: 290 MSLPHDLFTPLHRLERVHLNHN 311
Score = 167 (63.8 bits), Expect = 8.4e-09, P = 8.4e-09
Identities = 64/245 (26%), Positives = 107/245 (43%)
Query: 155 LSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAP 214
L+ VP S P+ N L+L N + + +FK L L L LS N + +
Sbjct: 77 LAEVPASI--PV--NTRYLNLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNG 132
Query: 215 LVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPS-TVPRLSSLKVLSIA 273
L +L L L NRLT A + L + +L L +N + PS R+ SL+ L +
Sbjct: 133 LPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESI--PSYAFNRVPSLRRLDLG 190
Query: 274 H-NQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGAS 332
+ + A GL L L+ ++ + + AL L L+L+ NR+ + S
Sbjct: 191 ELKRLEYISEAAFEGLVNLRYLNL--GMCNLKDIPNLTALVRLEELELSGNRLDLIRPGS 248
Query: 333 LAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELI 392
L++L L L H + + ++ LKSL+EL L N++ P ++ + ++ +
Sbjct: 249 FQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHL 308
Query: 393 YSGVW 397
W
Sbjct: 309 NHNPW 313
>UNIPROTKB|O75325 [details] [associations]
symbol:LRRN2 "Leucine-rich repeat neuronal protein 2"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0004872 "receptor activity" evidence=TAS]
[GO:0007155 "cell adhesion" evidence=TAS] [GO:0007165 "signal
transduction" evidence=TAS] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 GO:GO:0007165
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 EMBL:CH471067
GO:GO:0004872 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 MEROPS:I43.001 HOGENOM:HOG000252914
HOVERGEN:HBG052361 EMBL:AF030435 EMBL:AY358290 EMBL:AK312408
EMBL:AL512306 EMBL:BC034047 EMBL:BC068541 IPI:IPI00025256
RefSeq:NP_006329.2 RefSeq:NP_963924.1 UniGene:Hs.26312
ProteinModelPortal:O75325 SMR:O75325 IntAct:O75325 STRING:O75325
PhosphoSite:O75325 PRIDE:O75325 DNASU:10446 Ensembl:ENST00000367175
Ensembl:ENST00000367176 Ensembl:ENST00000367177 GeneID:10446
KEGG:hsa:10446 UCSC:uc001hbe.1 CTD:10446 GeneCards:GC01M204586
H-InvDB:HIX0001502 HGNC:HGNC:16914 HPA:HPA029124 MIM:605492
neXtProt:NX_O75325 PharmGKB:PA162394661 InParanoid:O75325
OMA:LHQQTVE OrthoDB:EOG4JWVCZ PhylomeDB:O75325 GenomeRNAi:10446
NextBio:39593 ArrayExpress:O75325 Bgee:O75325 CleanEx:HS_LRRN2
Genevestigator:O75325 GermOnline:ENSG00000170382 Uniprot:O75325
Length = 713
Score = 225 (84.3 bits), Expect = 4.0e-15, P = 4.0e-15
Identities = 79/263 (30%), Positives = 127/263 (48%)
Query: 120 LHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQ 179
L L + +L + D +F GL+S LQ L L +N L + A + L+ NL RL L+ N
Sbjct: 119 LLSLHLEENQLTRLEDHSFAGLAS-LQELYLNHNQLYRIAPRAFSGLS-NLLRLHLNSNL 176
Query: 180 LYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGL 239
L +++ F+ L +L L + NK+ + PL LR L L G L AL+GL
Sbjct: 177 LRAIDSRWFEMLPNLEILMIGGNKVDAILDMNFRPLANLRSLVLAGMNLREISDYALEGL 236
Query: 240 RSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHH- 298
+S+ L N LA + + ++ LK L + N V G A + L L ++
Sbjct: 237 QSLESLSFYDNQLAR-VPRRALEQVPGLKFLDLNKNPLQRVGPGDFANMLHLKELGLNNM 295
Query: 299 NQIDVLEDHSFRALSTLSHLDLAHN-RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLI 357
++ ++ + L L+ LD+ +N R+ + + HL + TL L++N L AL Q +
Sbjct: 296 EELVSIDKFALVNLPELTKLDITNNPRLSFIHPRAFHHLPQMETLMLNNNALSALHQQTV 355
Query: 358 TPLKSLQELRLDDNDISMEPECI 380
L +LQE+ L N I + C+
Sbjct: 356 ESLPNLQEVGLHGNPIRCD--CV 376
Score = 179 (68.1 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 66/234 (28%), Positives = 115/234 (49%)
Query: 119 TLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHN 178
+L L ++ +L I+ AF GLS+ L+ L L +NLL + S + PNL+ L + N
Sbjct: 142 SLQELYLNHNQLYRIAPRAFSGLSNLLR-LHLNSNLLRAID-SRWFEMLPNLEILMIGGN 199
Query: 179 QLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQG 238
++ + + +F+ L++L L L+ L +S L L +L L N+L AL+
Sbjct: 200 KVDAILDMNFRPLANLRSLVLAGMNLREISDYALEGLQSLESLSFYDNQLARVPRRALEQ 259
Query: 239 LRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAH-NQFSSVRRGALAGLDKLTSLSCH 297
+ + LDL+ N L +GP + LK L + + + S+ + AL L +LT L
Sbjct: 260 VPGLKFLDLNKNPLQR-VGPGDFANMLHLKELGLNNMEELVSIDKFALVNLPELTKLDIT 318
Query: 298 HN-QIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLR 350
+N ++ + +F L + L L +N + A+ ++ L NL + L N +R
Sbjct: 319 NNPRLSFIHPRAFHHLPQMETLMLNNNALSALHQQTVESLPNLQEVGLHGNPIR 372
Score = 178 (67.7 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 66/230 (28%), Positives = 100/230 (43%)
Query: 141 LSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLS 200
L + Q L L +N + V S L LA NL LDLS N + F L L L L
Sbjct: 67 LPAGTQTLLLQSNSIVRVDQSELGYLA-NLTELDLSQNSFSDARDCDFHALPQLLSLHLE 125
Query: 201 YNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPST 260
N+L L A L +L+ L L N+L A GL ++ L L+ NLL +
Sbjct: 126 ENQLTRLEDHSFAGLASLQELYLNHNQLYRIAPRAFSGLSNLLRLHLNSNLLRA-IDSRW 184
Query: 261 VPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 320
L +L++L I N+ ++ L L SL + + D++ L +L L
Sbjct: 185 FEMLPNLEILMIGGNKVDAILDMNFRPLANLRSLVLAGMNLREISDYALEGLQSLESLSF 244
Query: 321 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDD 370
N++ V +L + L LDL+ N L+ + + L+EL L++
Sbjct: 245 YDNQLARVPRRALEQVPGLKFLDLNKNPLQRVGPGDFANMLHLKELGLNN 294
Score = 163 (62.4 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 39/110 (35%), Positives = 59/110 (53%)
Query: 264 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 323
L++L L ++ N FS R L +L SL NQ+ LEDHSF L++L L L HN
Sbjct: 92 LANLTELDLSQNSFSDARDCDFHALPQLLSLHLEENQLTRLEDHSFAGLASLQELYLNHN 151
Query: 324 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 373
++ ++ + + LSNL L L+ N LRA+ L +L+ L + N +
Sbjct: 152 QLYRIAPRAFSGLSNLLRLHLNSNLLRAIDSRWFEMLPNLEILMIGGNKV 201
Score = 137 (53.3 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 60/210 (28%), Positives = 97/210 (46%)
Query: 68 LPHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISS 127
L + LR N + L AI + P+ + ++ + +L F L LV++
Sbjct: 164 LSNLLRLHLNSNLLRAIDSRWFEMLPNLEILMIGGNKVDA-ILDMNFRPLANLRSLVLAG 222
Query: 128 GELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTS 187
L+ ISD A GL S L++L +N L+ VP AL + P L LDL+ N L ++
Sbjct: 223 MNLREISDYALEGLQS-LESLSFYDNQLARVPRRALEQV-PGLKFLDLNKNPLQRVGPGD 280
Query: 188 FKGLSSLNFLDLS-YNKLMTLSQDCLAPLVTLRVLRLQGN-RLTVSVVAALQGLRSVTDL 245
F + L L L+ +L+++ + L L L L + N RL+ A L + L
Sbjct: 281 FANMLHLKELGLNNMEELVSIDKFALVNLPELTKLDITNNPRLSFIHPRAFHHLPQMETL 340
Query: 246 DLSHNLLAGPLGPSTVPRLSSLKVLSIAHN 275
L++N L+ L TV L +L+ + + N
Sbjct: 341 MLNNNALSA-LHQQTVESLPNLQEVGLHGN 369
Score = 55 (24.4 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 16/50 (32%), Positives = 25/50 (50%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNVI 693
L SL+ LS NQ + V R AL + L L + N + + F+N++
Sbjct: 236 LQSLESLSFYDNQLARVPRRALEQVPGLKFLDLNKNPLQRVGPGDFANML 285
Score = 55 (24.4 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 16/51 (31%), Positives = 25/51 (49%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNVIG 694
L++L+ L +A + AL GL L SLS + NQ+ + + V G
Sbjct: 212 LANLRSLVLAGMNLREISDYALEGLQSLESLSFYDNQLARVPRRALEQVPG 262
Score = 41 (19.5 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 9/38 (23%), Positives = 18/38 (47%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
L ++ L + +N S++ + + L L + H N I
Sbjct: 334 LPQMETLMLNNNALSALHQQTVESLPNLQEVGLHGNPI 371
>UNIPROTKB|F1PZW2 [details] [associations]
symbol:LRRC4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051965 "positive regulation of synapse
assembly" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026883 PROSITE:PS50835 PROSITE:PS51450
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 GeneTree:ENSGT00690000101682 CTD:94030 KO:K16360
OMA:NNTTCCA PANTHER:PTHR24369:SF7 EMBL:AAEX03000782
EMBL:AAEX03000783 EMBL:AAEX03000784 EMBL:AAEX03000785
EMBL:AAEX03000786 RefSeq:XP_541477.2 Ensembl:ENSCAFT00000004749
GeneID:484361 KEGG:cfa:484361 Uniprot:F1PZW2
Length = 717
Score = 225 (84.3 bits), Expect = 4.1e-15, P = 4.1e-15
Identities = 68/224 (30%), Positives = 107/224 (47%)
Query: 148 LGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTL 207
L L N + V+ T L +L+ L LS N + K+E +F GL SLN L+L N+L T+
Sbjct: 91 LNLQENGIQVIRTDTFKHLR-HLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTV 149
Query: 208 SQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSL 267
L LR L L+ N + A + S+ LDL + + L +L
Sbjct: 150 PTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNL 209
Query: 268 KVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVA 327
+ L++ + L L +L L N++D++ SF+ L++L L L H ++
Sbjct: 210 RYLNLGMCNLKDIPN--LTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVAT 267
Query: 328 VSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
+ + L +L L+LSHN L +L DL TPL L+ + L+ N
Sbjct: 268 IERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHN 311
Score = 190 (71.9 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 65/202 (32%), Positives = 96/202 (47%)
Query: 123 LVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYK 182
L +S ++ I GAF GL S L L L +N L+ VPT A L+ L L L +N +
Sbjct: 115 LQLSKNLVRKIEVGAFNGLPS-LNTLELFDNRLTTVPTQAFEYLS-KLRELWLRNNPIES 172
Query: 183 LENTSFKGLSSLNFLDLS-YNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRS 241
+ + +F + SL LDL +L +S+ LV LR L L + + L L
Sbjct: 173 IPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNL--GMCNLKDIPNLTALVR 230
Query: 242 VTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 301
+ +L+LS N L + P + L+SL+ L + H Q +++ R A L L L+ HN +
Sbjct: 231 LEELELSGNRL-DLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNL 289
Query: 302 DVLEDHSFRALSTLSHLDLAHN 323
L F L L + L HN
Sbjct: 290 MSLPHDLFTPLHRLERVHLNHN 311
Score = 167 (63.8 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 64/245 (26%), Positives = 107/245 (43%)
Query: 155 LSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAP 214
L+ VP S P+ N L+L N + + +FK L L L LS N + +
Sbjct: 77 LAEVPASI--PV--NTRYLNLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNG 132
Query: 215 LVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPS-TVPRLSSLKVLSIA 273
L +L L L NRLT A + L + +L L +N + PS R+ SL+ L +
Sbjct: 133 LPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESI--PSYAFNRVPSLRRLDLG 190
Query: 274 H-NQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGAS 332
+ + A GL L L+ ++ + + AL L L+L+ NR+ + S
Sbjct: 191 ELKRLEYISEAAFEGLVNLRYLNL--GMCNLKDIPNLTALVRLEELELSGNRLDLIRPGS 248
Query: 333 LAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELI 392
L++L L L H + + ++ LKSL+EL L N++ P ++ + ++ +
Sbjct: 249 FQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHL 308
Query: 393 YSGVW 397
W
Sbjct: 309 NHNPW 313
>UNIPROTKB|I3LJI7 [details] [associations]
symbol:LRRC4B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051965 "positive regulation of synapse assembly"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026883
PROSITE:PS50835 PROSITE:PS51450 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 OMA:NNTTCCA PANTHER:PTHR24369:SF7
EMBL:FP102476 EMBL:FP102472 Ensembl:ENSSSCT00000029477
Uniprot:I3LJI7
Length = 721
Score = 225 (84.3 bits), Expect = 4.1e-15, P = 4.1e-15
Identities = 68/224 (30%), Positives = 107/224 (47%)
Query: 148 LGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTL 207
L L N + V+ T L +L+ L LS N + K+E +F GL SLN L+L N+L T+
Sbjct: 91 LNLQENGIQVIRTDTFKHLR-HLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTV 149
Query: 208 SQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSL 267
L LR L L+ N + A + S+ LDL + + L +L
Sbjct: 150 PTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNL 209
Query: 268 KVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVA 327
+ L++ + L L +L L N++D++ SF+ L++L L L H ++
Sbjct: 210 RYLNLGMCNLKDIPN--LTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVAT 267
Query: 328 VSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
+ + L +L L+LSHN L +L DL TPL L+ + L+ N
Sbjct: 268 IERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHN 311
Score = 190 (71.9 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 65/202 (32%), Positives = 96/202 (47%)
Query: 123 LVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYK 182
L +S ++ I GAF GL S L L L +N L+ VPT A L+ L L L +N +
Sbjct: 115 LQLSKNLVRKIEVGAFNGLPS-LNTLELFDNRLTTVPTQAFEYLS-KLRELWLRNNPIES 172
Query: 183 LENTSFKGLSSLNFLDLS-YNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRS 241
+ + +F + SL LDL +L +S+ LV LR L L + + L L
Sbjct: 173 IPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNL--GMCNLKDIPNLTALVR 230
Query: 242 VTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 301
+ +L+LS N L + P + L+SL+ L + H Q +++ R A L L L+ HN +
Sbjct: 231 LEELELSGNRL-DLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNL 289
Query: 302 DVLEDHSFRALSTLSHLDLAHN 323
L F L L + L HN
Sbjct: 290 MSLPHDLFTPLHRLERVHLNHN 311
Score = 167 (63.8 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 64/245 (26%), Positives = 107/245 (43%)
Query: 155 LSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAP 214
L+ VP S P+ N L+L N + + +FK L L L LS N + +
Sbjct: 77 LAEVPASI--PV--NTRYLNLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNG 132
Query: 215 LVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPS-TVPRLSSLKVLSIA 273
L +L L L NRLT A + L + +L L +N + PS R+ SL+ L +
Sbjct: 133 LPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESI--PSYAFNRVPSLRRLDLG 190
Query: 274 H-NQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGAS 332
+ + A GL L L+ ++ + + AL L L+L+ NR+ + S
Sbjct: 191 ELKRLEYISEAAFEGLVNLRYLNL--GMCNLKDIPNLTALVRLEELELSGNRLDLIRPGS 248
Query: 333 LAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELI 392
L++L L L H + + ++ LKSL+EL L N++ P ++ + ++ +
Sbjct: 249 FQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHL 308
Query: 393 YSGVW 397
W
Sbjct: 309 NHNPW 313
>MGI|MGI:1914123 [details] [associations]
symbol:Tril "TLR4 interactor with leucine-rich repeats"
species:10090 "Mus musculus" [GO:0001530 "lipopolysaccharide
binding" evidence=ISO] [GO:0002718 "regulation of cytokine
production involved in immune response" evidence=ISO] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0034142 "toll-like receptor 4 signaling pathway" evidence=ISO]
[GO:0045087 "innate immune response" evidence=IEA] [GO:0046696
"lipopolysaccharide receptor complex" evidence=ISO]
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1914123 GO:GO:0016021
GO:GO:0006954 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0045087 InterPro:IPR000372
SMART:SM00013 HSSP:Q9BZR6 GeneTree:ENSGT00700000104056 Pfam:PF01463
CTD:9865 HOVERGEN:HBG066060 EMBL:AK122338 EMBL:AK004681
EMBL:AK033401 EMBL:AK051421 EMBL:BC043099 EMBL:BC059224
IPI:IPI00469248 RefSeq:NP_080093.1 UniGene:Mm.422727
UniGene:Mm.475802 UniGene:Mm.480530 ProteinModelPortal:Q9DBY4
SMR:Q9DBY4 STRING:Q9DBY4 PRIDE:Q9DBY4 Ensembl:ENSMUST00000127748
GeneID:66873 KEGG:mmu:66873 UCSC:uc009bzk.2 OMA:EFPCDRF
OrthoDB:EOG4KWJSW NextBio:322893 Bgee:Q9DBY4 Genevestigator:Q9DBY4
Uniprot:Q9DBY4
Length = 809
Score = 235 (87.8 bits), Expect = 4.2e-15, Sum P(2) = 4.2e-15
Identities = 101/314 (32%), Positives = 139/314 (44%)
Query: 64 CACDLPHTLRCTANKSDLYAISESLRGLEPDERV--SLLDCTLSNVTVLPGKFLEGVTLH 121
C C P L CT N+ L A+ ++ P + + SL ++N+T L G L
Sbjct: 31 CDCQHPQHLLCT-NRG-LRAVPKTSSLPSPQDVLTYSLGGNFITNITAFDFHRL-G-QLR 86
Query: 122 GLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLY 181
L + +++++ F LS L+ L L NNLL + LAPL L L + N++
Sbjct: 87 RLDLQYNQIRSLHPKTFEKLSR-LEELYLGNNLLQALVPGTLAPLR-KLRILYANGNEIG 144
Query: 182 KLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRS 241
+L SF+GL SL L L N L L APL L L L+ NR+ A L
Sbjct: 145 RLSRGSFEGLESLVKLRLDGNVLGALPDAVFAPLGNLLYLHLESNRIRFLGKNAFSQLGK 204
Query: 242 VTDLDLSHNLLAGPLG-PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQ 300
+ L+LS N L L +T L SL L ++ N + L +L LS NQ
Sbjct: 205 LRFLNLSANELQPSLRHAATFVPLRSLSTLILSANSLQHLGPRVFQHLPRLGLLSLSGNQ 264
Query: 301 IDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPL 360
+ L +F L L L L NR+ + L L +L LDLS N L AL
Sbjct: 265 LTHLAPEAFWGLEALRELRLEGNRLNQLPLTLLEPLHSLEALDLSGNELSALHPATFGHQ 324
Query: 361 KSLQELRLDDNDIS 374
L+EL L DN +S
Sbjct: 325 GRLRELSLRDNALS 338
Score = 224 (83.9 bits), Expect = 6.8e-14, Sum P(2) = 6.8e-14
Identities = 77/241 (31%), Positives = 112/241 (46%)
Query: 141 LSSPLQAL--GLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLD 198
L SP L L N ++ + L L RLDL +NQ+ L +F+ LS L L
Sbjct: 55 LPSPQDVLTYSLGGNFITNITAFDFHRLG-QLRRLDLQYNQIRSLHPKTFEKLSRLEELY 113
Query: 199 LSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGP 258
L N L L LAPL LR+L GN + + +GL S+ L L N+L G L
Sbjct: 114 LGNNLLQALVPGTLAPLRKLRILYANGNEIGRLSRGSFEGLESLVKLRLDGNVL-GALPD 172
Query: 259 STVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHS--FRALSTLS 316
+ L +L L + N+ + + A + L KL L+ N++ H+ F L +LS
Sbjct: 173 AVFAPLGNLLYLHLESNRIRFLGKNAFSQLGKLRFLNLSANELQPSLRHAATFVPLRSLS 232
Query: 317 HLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISME 376
L L+ N + + HL L L LS N L L + L++L+ELRL+ N ++
Sbjct: 233 TLILSANSLQHLGPRVFQHLPRLGLLSLSGNQLTHLAPEAFWGLEALRELRLEGNRLNQL 292
Query: 377 P 377
P
Sbjct: 293 P 293
Score = 221 (82.9 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 82/275 (29%), Positives = 124/275 (45%)
Query: 100 LDCTLSNVTVLPGKFLEGVT-LHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVV 158
LD + + L K E ++ L L + + L+ + G L L+ L N + +
Sbjct: 88 LDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQALVPGTLAPLRK-LRILYANGNEIGRL 146
Query: 159 PTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTL 218
+ L +L +L L N L L + F L +L +L L N++ L ++ + L L
Sbjct: 147 SRGSFEGLE-SLVKLRLDGNVLGALPDAVFAPLGNLLYLHLESNRIRFLGKNAFSQLGKL 205
Query: 219 RVLRLQGNRLTVSV--VAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQ 276
R L L N L S+ A LRS++ L LS N L LGP L L +LS++ NQ
Sbjct: 206 RFLNLSANELQPSLRHAATFVPLRSLSTLILSANSLQH-LGPRVFQHLPRLGLLSLSGNQ 264
Query: 277 FSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHL 336
+ + A GL+ L L N+++ L L +L LDL+ N + A+ A+ H
Sbjct: 265 LTHLAPEAFWGLEALRELRLEGNRLNQLPLTLLEPLHSLEALDLSGNELSALHPATFGHQ 324
Query: 337 SNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
L L L N L AL+ D+ +L L LD N
Sbjct: 325 GRLRELSLRDNALSALSGDIFAASPALYRLDLDGN 359
Score = 156 (60.0 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 53/179 (29%), Positives = 83/179 (46%)
Query: 223 LQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRR 282
L GN +T L + LDL +N + L P T +LS L+ L + +N ++
Sbjct: 66 LGGNFITNITAFDFHRLGQLRRLDLQYNQIRS-LHPKTFEKLSRLEELYLGNNLLQALVP 124
Query: 283 GALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTL 342
G LA L KL L + N+I L SF L +L L L N + A+ A A L NL L
Sbjct: 125 GTLAPLRKLRILYANGNEIGRLSRGSFEGLESLVKLRLDGNVLGALPDAVFAPLGNLLYL 184
Query: 343 DLSHNFLRALTQDLITPLKSLQELRLDDNDI--SMEPECIYVGFNTMDLELIYSGVWRH 399
L N +R L ++ + L L+ L L N++ S+ +V ++ ++ + +H
Sbjct: 185 HLESNRIRFLGKNAFSQLGKLRFLNLSANELQPSLRHAATFVPLRSLSTLILSANSLQH 243
Score = 125 (49.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 48/155 (30%), Positives = 72/155 (46%)
Query: 246 DLSH--NLLAGPLGPSTVPRLSSLK----VL--SIAHNQFSSVRRGALAGLDKLTSLSCH 297
D H +LL G VP+ SSL VL S+ N +++ L +L L
Sbjct: 32 DCQHPQHLLCTNRGLRAVPKTSSLPSPQDVLTYSLGGNFITNITAFDFHRLGQLRRLDLQ 91
Query: 298 HNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLI 357
+NQI L +F LS L L L +N + A+ +LA L L L + N + L++
Sbjct: 92 YNQIRSLHPKTFEKLSRLEELYLGNNLLQALVPGTLAPLRKLRILYANGNEIGRLSRGSF 151
Query: 358 TPLKSLQELRLDDNDISMEPECIYVGF-NTMDLEL 391
L+SL +LRLD N + P+ ++ N + L L
Sbjct: 152 EGLESLVKLRLDGNVLGALPDAVFAPLGNLLYLHL 186
Score = 51 (23.0 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 608 TIHHHACFIPVAQQEDDINRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAG 667
++ H A F+P+ I NS +++ + L L +LS++ NQ + + A G
Sbjct: 218 SLRHAATFVPLRSLSTLILSANS-LQHLGPRVFQHL-PRLGLLSLSGNQLTHLAPEAFWG 275
Query: 668 LDKLTSLSCHHNQIDVL 684
L+ L L N+++ L
Sbjct: 276 LEALRELRLEGNRLNQL 292
Score = 45 (20.9 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 15/51 (29%), Positives = 22/51 (43%)
Query: 639 ATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
AT + L SL L ++ N + L +L LS NQ+ L +F
Sbjct: 223 ATFVPLRSLSTLILSANSLQHLGPRVFQHLPRLGLLSLSGNQLTHLAPEAF 273
Score = 38 (18.4 bits), Expect = 4.2e-15, Sum P(2) = 4.2e-15
Identities = 9/22 (40%), Positives = 11/22 (50%)
Query: 521 PKYQVCATLGEFPTDKPLLHCI 542
P+ ATL E D P L C+
Sbjct: 638 PERSDSATLHELRGDTPYLVCV 659
>RGD|1310827 [details] [associations]
symbol:Tril "TLR4 interactor with leucine-rich repeats"
species:10116 "Rattus norvegicus" [GO:0001530 "lipopolysaccharide
binding" evidence=ISO] [GO:0002718 "regulation of cytokine
production involved in immune response" evidence=ISO] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0034142 "toll-like receptor 4 signaling
pathway" evidence=ISO] [GO:0045087 "innate immune response"
evidence=IEA] [GO:0046696 "lipopolysaccharide receptor complex"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
RGD:1310827 GO:GO:0016021 GO:GO:0006954 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0045087 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104056 Pfam:PF01463 HSSP:P07359 CTD:9865
HOVERGEN:HBG066060 OMA:EFPCDRF OrthoDB:EOG4KWJSW EMBL:BC100659
IPI:IPI00358213 RefSeq:NP_001029182.1 UniGene:Rn.25045
STRING:Q496Z2 Ensembl:ENSRNOT00000036951 GeneID:362364
KEGG:rno:362364 UCSC:RGD:1310827 InParanoid:Q496Z2 NextBio:679662
Genevestigator:Q496Z2 Uniprot:Q496Z2
Length = 811
Score = 235 (87.8 bits), Expect = 4.2e-15, Sum P(2) = 4.2e-15
Identities = 101/314 (32%), Positives = 139/314 (44%)
Query: 64 CACDLPHTLRCTANKSDLYAISESLRGLEPDERV--SLLDCTLSNVTVLPGKFLEGVTLH 121
C C P L CT N+ L A+ ++ P + + SL ++N+T L G L
Sbjct: 31 CDCQHPQHLLCT-NRG-LRAVPKTSSLPSPQDVLTYSLGGNFITNITAFDFHRL-G-QLR 86
Query: 122 GLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLY 181
L + +++++ F LS L+ L L NNLL + LAPL L L + N++
Sbjct: 87 RLDLQYNQIRSLHPKTFEKLSR-LEELYLGNNLLQALAPGTLAPLR-KLRILYANGNEIG 144
Query: 182 KLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRS 241
+L SF+GL SL L L N L L APL L L L+ NR+ A L
Sbjct: 145 RLSRGSFEGLESLVKLRLDGNVLGALPDAVFAPLGNLLYLHLEANRIRFLGKNAFTQLGK 204
Query: 242 VTDLDLSHNLLAGPLG-PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQ 300
+ L+LS N L L +T L SL L ++ N + L +L LS NQ
Sbjct: 205 LRFLNLSANELQPSLRHAATFVPLRSLSTLILSANSLQHLGPRVFQHLPRLGLLSLSGNQ 264
Query: 301 IDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPL 360
+ L +F L L L L NR+ + L L +L LDLS N L AL
Sbjct: 265 LTHLAPEAFWGLEALRELRLEGNRLNQLPLTLLEPLHSLEALDLSGNELSALHPATFGHQ 324
Query: 361 KSLQELRLDDNDIS 374
L+EL L DN +S
Sbjct: 325 GRLRELSLRDNALS 338
Score = 225 (84.3 bits), Expect = 5.3e-14, Sum P(2) = 5.3e-14
Identities = 77/241 (31%), Positives = 112/241 (46%)
Query: 141 LSSPLQAL--GLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLD 198
L SP L L N ++ + L L RLDL +NQ+ L +F+ LS L L
Sbjct: 55 LPSPQDVLTYSLGGNFITNITAFDFHRLG-QLRRLDLQYNQIRSLHPKTFEKLSRLEELY 113
Query: 199 LSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGP 258
L N L L+ LAPL LR+L GN + + +GL S+ L L N+L G L
Sbjct: 114 LGNNLLQALAPGTLAPLRKLRILYANGNEIGRLSRGSFEGLESLVKLRLDGNVL-GALPD 172
Query: 259 STVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHS--FRALSTLS 316
+ L +L L + N+ + + A L KL L+ N++ H+ F L +LS
Sbjct: 173 AVFAPLGNLLYLHLEANRIRFLGKNAFTQLGKLRFLNLSANELQPSLRHAATFVPLRSLS 232
Query: 317 HLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISME 376
L L+ N + + HL L L LS N L L + L++L+ELRL+ N ++
Sbjct: 233 TLILSANSLQHLGPRVFQHLPRLGLLSLSGNQLTHLAPEAFWGLEALRELRLEGNRLNQL 292
Query: 377 P 377
P
Sbjct: 293 P 293
Score = 223 (83.6 bits), Expect = 8.8e-14, Sum P(2) = 8.8e-14
Identities = 82/275 (29%), Positives = 124/275 (45%)
Query: 100 LDCTLSNVTVLPGKFLEGVT-LHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVV 158
LD + + L K E ++ L L + + L+ ++ G L L+ L N + +
Sbjct: 88 LDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQALAPGTLAPLRK-LRILYANGNEIGRL 146
Query: 159 PTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTL 218
+ L +L +L L N L L + F L +L +L L N++ L ++ L L
Sbjct: 147 SRGSFEGLE-SLVKLRLDGNVLGALPDAVFAPLGNLLYLHLEANRIRFLGKNAFTQLGKL 205
Query: 219 RVLRLQGNRLTVSV--VAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQ 276
R L L N L S+ A LRS++ L LS N L LGP L L +LS++ NQ
Sbjct: 206 RFLNLSANELQPSLRHAATFVPLRSLSTLILSANSLQH-LGPRVFQHLPRLGLLSLSGNQ 264
Query: 277 FSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHL 336
+ + A GL+ L L N+++ L L +L LDL+ N + A+ A+ H
Sbjct: 265 LTHLAPEAFWGLEALRELRLEGNRLNQLPLTLLEPLHSLEALDLSGNELSALHPATFGHQ 324
Query: 337 SNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
L L L N L AL+ D+ +L L LD N
Sbjct: 325 GRLRELSLRDNALSALSGDIFAASPALYRLDLDGN 359
Score = 161 (61.7 bits), Expect = 9.0e-08, Sum P(2) = 9.0e-08
Identities = 54/179 (30%), Positives = 83/179 (46%)
Query: 223 LQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRR 282
L GN +T L + LDL +N + L P T +LS L+ L + +N ++
Sbjct: 66 LGGNFITNITAFDFHRLGQLRRLDLQYNQIRS-LHPKTFEKLSRLEELYLGNNLLQALAP 124
Query: 283 GALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTL 342
G LA L KL L + N+I L SF L +L L L N + A+ A A L NL L
Sbjct: 125 GTLAPLRKLRILYANGNEIGRLSRGSFEGLESLVKLRLDGNVLGALPDAVFAPLGNLLYL 184
Query: 343 DLSHNFLRALTQDLITPLKSLQELRLDDNDI--SMEPECIYVGFNTMDLELIYSGVWRH 399
L N +R L ++ T L L+ L L N++ S+ +V ++ ++ + +H
Sbjct: 185 HLEANRIRFLGKNAFTQLGKLRFLNLSANELQPSLRHAATFVPLRSLSTLILSANSLQH 243
Score = 128 (50.1 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 48/155 (30%), Positives = 73/155 (47%)
Query: 246 DLSH--NLLAGPLGPSTVPRLSSLK----VL--SIAHNQFSSVRRGALAGLDKLTSLSCH 297
D H +LL G VP+ SSL VL S+ N +++ L +L L
Sbjct: 32 DCQHPQHLLCTNRGLRAVPKTSSLPSPQDVLTYSLGGNFITNITAFDFHRLGQLRRLDLQ 91
Query: 298 HNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLI 357
+NQI L +F LS L L L +N + A++ +LA L L L + N + L++
Sbjct: 92 YNQIRSLHPKTFEKLSRLEELYLGNNLLQALAPGTLAPLRKLRILYANGNEIGRLSRGSF 151
Query: 358 TPLKSLQELRLDDNDISMEPECIYVGF-NTMDLEL 391
L+SL +LRLD N + P+ ++ N + L L
Sbjct: 152 EGLESLVKLRLDGNVLGALPDAVFAPLGNLLYLHL 186
Score = 51 (23.0 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 608 TIHHHACFIPVAQQEDDINRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAG 667
++ H A F+P+ I NS +++ + L L +LS++ NQ + + A G
Sbjct: 218 SLRHAATFVPLRSLSTLILSANS-LQHLGPRVFQHL-PRLGLLSLSGNQLTHLAPEAFWG 275
Query: 668 LDKLTSLSCHHNQIDVL 684
L+ L L N+++ L
Sbjct: 276 LEALRELRLEGNRLNQL 292
Score = 45 (20.9 bits), Expect = 9.0e-08, Sum P(2) = 9.0e-08
Identities = 15/51 (29%), Positives = 22/51 (43%)
Query: 639 ATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
AT + L SL L ++ N + L +L LS NQ+ L +F
Sbjct: 223 ATFVPLRSLSTLILSANSLQHLGPRVFQHLPRLGLLSLSGNQLTHLAPEAF 273
Score = 38 (18.4 bits), Expect = 4.2e-15, Sum P(2) = 4.2e-15
Identities = 9/22 (40%), Positives = 11/22 (50%)
Query: 521 PKYQVCATLGEFPTDKPLLHCI 542
P+ ATL E D P L C+
Sbjct: 640 PERSDSATLHELRGDTPYLVCV 661
>UNIPROTKB|F1NWG8 [details] [associations]
symbol:F1NWG8 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0050808 "synapse organization" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104056 OMA:IRQCSMI EMBL:AADN02035971
IPI:IPI00583715 Ensembl:ENSGALT00000003872 Uniprot:F1NWG8
Length = 520
Score = 222 (83.2 bits), Expect = 4.6e-15, P = 4.6e-15
Identities = 78/250 (31%), Positives = 110/250 (44%)
Query: 122 GLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLY 181
GL + + + F S L L L +N ++ V + L L L LS N+++
Sbjct: 70 GLSLRHNFITELERDQFASFSQ-LTWLHLDHNQIATVREDSFQGLY-KLKELVLSSNKIF 127
Query: 182 KLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRS 241
L NT+F L +L LDLS+N+L +L + L L L+ L L+ N L V RS
Sbjct: 128 HLPNTTFSQLLNLQNLDLSFNQLSSLHPELLYGLRKLQTLHLRSNSLRTIPVRLFWDCRS 187
Query: 242 VTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 301
+ LDLS N L L + L L+ L + HNQ + + L L +L N+I
Sbjct: 188 LEFLDLSTNRLRS-LARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKI 246
Query: 302 DVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLK 361
L TL LDL N I A+ + NL TL L +N L L ++ L
Sbjct: 247 SNLTCGMEWTWGTLEKLDLTGNDIKAIDLTVFETMPNLKTLLLDNNKLSTLDSKILRSLP 306
Query: 362 SLQELRLDDN 371
SL + L N
Sbjct: 307 SLSTVGLSGN 316
Score = 218 (81.8 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 74/232 (31%), Positives = 111/232 (47%)
Query: 148 LGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTL 207
L L +N ++ + A + L L L HNQ+ + SF+GL L L LS NK+ L
Sbjct: 71 LSLRHNFITELERDQFASFS-QLTWLHLDHNQIATVREDSFQGLYKLKELVLSSNKIFHL 129
Query: 208 SQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVP-RL-- 264
+ L+ L+ L L N+L+ L GLR + L L N L T+P RL
Sbjct: 130 PNTTFSQLLNLQNLDLSFNQLSSLHPELLYGLRKLQTLHLRSNSLR------TIPVRLFW 183
Query: 265 --SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 322
SL+ L ++ N+ S+ R AGL KL L HNQ+ + F LS+L L L
Sbjct: 184 DCRSLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQW 243
Query: 323 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 374
N+I ++ L LDL+ N ++A+ + + +L+ L LD+N +S
Sbjct: 244 NKISNLTCGMEWTWGTLEKLDLTGNDIKAIDLTVFETMPNLKTLLLDNNKLS 295
Score = 164 (62.8 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 43/120 (35%), Positives = 62/120 (51%)
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 317
P+T + SL LS+ HN + + R A +LT L HNQI + + SF+ L L
Sbjct: 61 PNTTEK-GSLG-LSLRHNFITELERDQFASFSQLTWLHLDHNQIATVREDSFQGLYKLKE 118
Query: 318 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEP 377
L L+ N+I + + + L NL LDLS N L +L +L+ L+ LQ L L N + P
Sbjct: 119 LVLSSNKIFHLPNTTFSQLLNLQNLDLSFNQLSSLHPELLYGLRKLQTLHLRSNSLRTIP 178
Score = 70 (29.7 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 646 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
SL+ L ++ N+ S+ R AGL KL L HNQ+
Sbjct: 187 SLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQL 222
Score = 43 (20.2 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 12/41 (29%), Positives = 18/41 (43%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL 684
L L+ L + HNQ + + L L +L N+I L
Sbjct: 209 LIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNL 249
>UNIPROTKB|F1SUL2 [details] [associations]
symbol:LRRC32 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050710 "negative regulation of cytokine secretion"
evidence=IEA] [GO:0046007 "negative regulation of activated T cell
proliferation" evidence=IEA] [GO:0010628 "positive regulation of
gene expression" evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
InterPro:IPR003591 SMART:SM00369 GO:GO:0010628 InterPro:IPR000372
SMART:SM00013 GO:GO:0046007 GO:GO:0050710
GeneTree:ENSGT00700000104185 CTD:2615 OMA:CCGNGWL EMBL:CU915508
RefSeq:XP_003129719.1 UniGene:Ssc.93908 Ensembl:ENSSSCT00000016222
GeneID:100522452 KEGG:ssc:100522452 Uniprot:F1SUL2
Length = 663
Score = 212 (79.7 bits), Expect = 4.9e-15, Sum P(2) = 4.9e-15
Identities = 71/227 (31%), Positives = 103/227 (45%)
Query: 166 LAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQG 225
LA +++ LDLS NQL + + +L LDLS N++ +L L L L L
Sbjct: 48 LARDIEALDLSGNQLRSIPASPLGFYVALRRLDLSANEISSLQPGAFQALPHLEHLNLAH 107
Query: 226 NRLTVSVVAALQGLRSV---TDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRR 282
NRL + GL + T LDLS N L L + +L+ LS+A N + + R
Sbjct: 108 NRLAQGMALGAGGLGPLPHLTALDLSGNSLYSGLAEQLLGEAPALRTLSLAENSLTRLAR 167
Query: 283 GALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTL 342
G L L H N + +ED +F AL L+HL+L+ N + +S L L L
Sbjct: 168 HTFRGAPALEWLDLHSNVLMDIEDGAFEALPRLAHLNLSRNSLTCISDF---RLQQLRVL 224
Query: 343 DLSHNFLRALTQDLITPLK-SLQELRLDDN------DISMEPECIYV 382
DLS N + A P + L L L +N D++ P +Y+
Sbjct: 225 DLSCNSIEAFQTAPEPPAEYQLAWLDLRENRLLHFPDVTALPRLVYL 271
Score = 194 (73.4 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 79/243 (32%), Positives = 109/243 (44%)
Query: 141 LSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLS 200
L+ ++AL L N L +P S L L RLDLS N++ L+ +F+ L L L+L+
Sbjct: 48 LARDIEALDLSGNQLRSIPASPLGFYVA-LRRLDLSANEISSLQPGAFQALPHLEHLNLA 106
Query: 201 YNKL---MTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQG-LRSVTDLDLSHNLLAGPL 256
+N+L M L L PL L L L GN L + L G ++ L L+ N L L
Sbjct: 107 HNRLAQGMALGAGGLGPLPHLTALDLSGNSLYSGLAEQLLGEAPALRTLSLAENSLTR-L 165
Query: 257 GPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLS 316
T +L+ L + N + GA L +L L+ N + + D FR L L
Sbjct: 166 ARHTFRGAPALEWLDLHSNVLMDIEDGAFEALPRLAHLNLSRNSLTCISD--FR-LQQLR 222
Query: 317 HLDLAHNRIVAVSGASLAHLS-NLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISM 375
LDL+ N I A A L LDL N R L +T L L L + +N I +
Sbjct: 223 VLDLSCNSIEAFQTAPEPPAEYQLAWLDLREN--RLLHFPDVTALPRLVYLNVSNNLIRL 280
Query: 376 EPE 378
PE
Sbjct: 281 -PE 282
Score = 159 (61.0 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 84/287 (29%), Positives = 127/287 (44%)
Query: 90 GLEPDERVSLLDCTLSNV-TVLPGKFL-EGVTLHGLVISSGELKNISDGAFIGLSSPLQA 147
GL P ++ LD + +++ + L + L E L L ++ L ++ F G + L+
Sbjct: 120 GLGPLPHLTALDLSGNSLYSGLAEQLLGEAPALRTLSLAENSLTRLARHTFRGAPA-LEW 178
Query: 148 LGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTL 207
L L +N+L + A L P L L+LS N L + + F+ L L LDLS N +
Sbjct: 179 LDLHSNVLMDIEDGAFEAL-PRLAHLNLSRNSLTCISD--FR-LQQLRVLDLSCNSIEAF 234
Query: 208 SQDCLAPL-VTLRVLRLQGNRLT-VSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLS 265
P L L L+ NRL V AL L L++S+NL+ P GP
Sbjct: 235 QTAPEPPAEYQLAWLDLRENRLLHFPDVTALPRL---VYLNVSNNLIRLPEGPPQGGEGI 291
Query: 266 SLKVLSIAHNQFSSVRRGALAG-LDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 324
A S+ R A L +L +L +N+I+++ + L++L L+L+ N
Sbjct: 292 HAPSEGWAALPASNPGRNASTPPLSQLLNLDLSYNEIELVPEGFLEHLTSLRFLNLSRNC 351
Query: 325 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
+ A L L LD+SHN L L L SL+ L L DN
Sbjct: 352 LQAFRAWGAGSLPCLMRLDISHNALEKLELGA-GALGSLRTLLLQDN 397
Score = 152 (58.6 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 82/278 (29%), Positives = 115/278 (41%)
Query: 100 LDCTLSNVTVL-PGKFLEGVTLHGLVISSGEL-KNISDGAF-IGLSSPLQALGLPNNLLS 156
LD + + ++ L PG F L L ++ L + ++ GA +G L AL L N L
Sbjct: 79 LDLSANEISSLQPGAFQALPHLEHLNLAHNRLAQGMALGAGGLGPLPHLTALDLSGNSLY 138
Query: 157 VVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLV 216
L AP L L L+ N L +L +F+G +L +LDL N LM + L
Sbjct: 139 SGLAEQLLGEAPALRTLSLAENSLTRLARHTFRGAPALEWLDLHSNVLMDIEDGAFEALP 198
Query: 217 TLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLL-AGPLGPSTVPRLSSLKVLSIAHN 275
L L L N LT LQ LR LDLS N + A P P L L + N
Sbjct: 199 RLAHLNLSRNSLTCISDFRLQQLRV---LDLSCNSIEAFQTAPEP-PAEYQLAWLDLREN 254
Query: 276 QFSSVRRGALAGLDKLTSLSCHHNQIDVLED--HSFRALSTLSHLDLAHNRIVAVSGASL 333
+ + + L +L L+ +N I + E + S A AS
Sbjct: 255 RL--LHFPDVTALPRLVYLNVSNNLIRLPEGPPQGGEGIHAPSEGWAALPASNPGRNAST 312
Query: 334 AHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
LS L LDLS+N + + + + L SL+ L L N
Sbjct: 313 PPLSQLLNLDLSYNEIELVPEGFLEHLTSLRFLNLSRN 350
Score = 140 (54.3 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 62/201 (30%), Positives = 86/201 (42%)
Query: 185 NTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTD 244
N S LS L LDLSYN++ + + L L +LR L L N L L +
Sbjct: 309 NASTPPLSQLLNLDLSYNEIELVPEGFLEHLTSLRFLNLSRNCLQAFRAWGAGSLPCLMR 368
Query: 245 LDLSHNLLAG-PLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDV 303
LD+SHN L LG L SL+ L + N + A A L L L+ N+I
Sbjct: 369 LDISHNALEKLELGAGA---LGSLRTLLLQDNALWDLPPYAFASLASLQRLNLQGNRISP 425
Query: 304 LEDH---------SFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHN-FLRALT 353
+F +S+L L+L N++ + + H + LT LDLS N L T
Sbjct: 426 CGGPGEPGPSGCVAFSGISSLRFLNLVDNKVETLRAGAFLH-TPLTELDLSANPGLDVAT 484
Query: 354 QDLITPLKSLQELRLDDNDIS 374
L SL+ L L N ++
Sbjct: 485 GALAGLEGSLEVLALQGNGLA 505
Score = 139 (54.0 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 81/294 (27%), Positives = 121/294 (41%)
Query: 97 VSLLDCTLSNVTVLPGKFLEG-VTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLL 155
+ LD + + + +P L V L L +S+ E+ ++ GAF L L+ L L +N L
Sbjct: 52 IEALDLSGNQLRSIPASPLGFYVALRRLDLSANEISSLQPGAFQALPH-LEHLNLAHNRL 110
Query: 156 S---VVPTSALAPLAPNLDRLDLSHNQLYK-LENTSFKGLSSLNFLDLSYNKLMTLSQDC 211
+ + L PL P+L LDLS N LY L +L L L+ N L L++
Sbjct: 111 AQGMALGAGGLGPL-PHLTALDLSGNSLYSGLAEQLLGEAPALRTLSLAENSLTRLARHT 169
Query: 212 LAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLS 271
L L L N L A + L + L+LS N L S RL L+VL
Sbjct: 170 FRGAPALEWLDLHSNVLMDIEDGAFEALPRLAHLNLSRNSLTCI---SDF-RLQQLRVLD 225
Query: 272 IAHNQFSSVRRGALAGLD-KLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSG 330
++ N + + + +L L N++ L AL L +L++++N I G
Sbjct: 226 LSCNSIEAFQTAPEPPAEYQLAWLDLRENRL--LHFPDVTALPRLVYLNVSNNLIRLPEG 283
Query: 331 ASLA----HLSN--LTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPE 378
H + L S+ A T PL L L L N+I + PE
Sbjct: 284 PPQGGEGIHAPSEGWAALPASNPGRNASTP----PLSQLLNLDLSYNEIELVPE 333
Score = 59 (25.8 bits), Expect = 4.9e-15, Sum P(2) = 4.9e-15
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 628 NNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSL 674
N +++R +L A T +S L+VL + +N FS + A+ GL+ TSL
Sbjct: 521 NLAENRLSRLPAWTQAVS-LEVLDLRNNSFSLLPGSAMGGLE--TSL 564
Score = 56 (24.8 bits), Expect = 9.9e-15, Sum P(2) = 9.9e-15
Identities = 19/59 (32%), Positives = 29/59 (49%)
Query: 628 NNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLD-KLTSLSCHHNQIDVLE 685
N D++ L+A L + L L ++ N V GALAGL+ L L+ N + L+
Sbjct: 450 NLVDNKVETLRAGAFLHTPLTELDLSANPGLDVATGALAGLEGSLEVLALQGNGLATLQ 508
Score = 54 (24.1 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLE 685
L+SL+ L+++ N + R L L L HN ++ LE
Sbjct: 339 LTSLRFLNLSRNCLQAFRAWGAGSLPCLMRLDISHNALEKLE 380
Score = 46 (21.3 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQ-IDV 683
+SSL+ L++ N+ ++R GA LT L N +DV
Sbjct: 443 ISSLRFLNLVDNKVETLRAGAFLHTP-LTELDLSANPGLDV 482
Score = 40 (19.1 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 14/46 (30%), Positives = 20/46 (43%)
Query: 636 KLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
KL+ L SL+ L + N + A A L L L+ N+I
Sbjct: 378 KLELGAGALGSLRTLLLQDNALWDLPPYAFASLASLQRLNLQGNRI 423
>UNIPROTKB|E1BP10 [details] [associations]
symbol:SLIT1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050919 "negative chemotaxis" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0048495 "Roundabout binding" evidence=IEA] [GO:0040023
"establishment of nucleus localization" evidence=IEA] [GO:0033563
"dorsal/ventral axon guidance" evidence=IEA] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=IEA] [GO:0022028 "tangential
migration from the subventricular zone to the olfactory bulb"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 GO:GO:0005737 GO:GO:0005615 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045
PROSITE:PS01186 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 InterPro:IPR025875
Pfam:PF12799 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
Pfam:PF12661 GO:GO:0033563 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
OMA:KCVHGKC EMBL:DAAA02058910 IPI:IPI00697614
Ensembl:ENSBTAT00000061296 Uniprot:E1BP10
Length = 1396
Score = 160 (61.4 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 44/137 (32%), Positives = 71/137 (51%)
Query: 141 LSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLS 200
L + + L N + +P A +P L R+DLS+NQ+ ++ +F+GL SLN L L
Sbjct: 169 LPEAMTEIRLELNGIKSIPPGAFSPYR-KLRRIDLSNNQISEIAPDAFQGLRSLNSLVLY 227
Query: 201 YNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPST 260
NK+ L Q L TL++L L N++ + A Q L++++ L L N + L T
Sbjct: 228 GNKITDLPQGVFGGLFTLQLLLLNANKINCIRLDAFQDLQNLSLLSLYDNKIQS-LAKGT 286
Query: 261 VPRLSSLKVLSIAHNQF 277
L +++ L +A N F
Sbjct: 287 FTSLRAIQTLHLAQNPF 303
Score = 149 (57.5 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 38/131 (29%), Positives = 73/131 (55%)
Query: 148 LGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTL 207
L L NN +S++ + + +L +++LS+N++ ++E+ +F+G +S++ L L+ N+L ++
Sbjct: 407 LRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESI 466
Query: 208 SQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSL 267
L LR L L+ NR++ + GLR+V L L N +A + P L +L
Sbjct: 467 RSGMFRGLEGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIA-TISPGAFDTLQAL 525
Query: 268 KVLSIAHNQFS 278
L++ N F+
Sbjct: 526 STLNLLANPFN 536
Score = 146 (56.5 bits), Expect = 7.5e-08, Sum P(2) = 7.5e-08
Identities = 67/257 (26%), Positives = 105/257 (40%)
Query: 150 LPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQ 209
L N + +P A A +L L L NQ+ +E +F+ L L L L+ N + T+
Sbjct: 2 LSENTIQAIPRKAFRG-ATDLKNLQLDKNQIGCIEEGAFRALRGLEVLTLNNNNITTIPV 60
Query: 210 DCLAPLVTLRVLRLQGNRLTVSV-VAAL-QGLRSVTDLDLSHNLLAGPLGPSTVPRLSSL 267
+ LR RL N L +A L Q LR + L +GP G L L
Sbjct: 61 SSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGL-FTQCSGPAG------LRGL 113
Query: 268 KVLSIAHNQFSSVRRGALAGLDK--LTSLSCH-----HNQIDVLEDHSFRAL-----STL 315
V + ++FS +G L+S SC N I A+ +
Sbjct: 114 NVAEVQKSEFSCSGQGEAGRTPSCTLSSGSCPAMCACSNGIVDCRGKGLTAIPANLPEAM 173
Query: 316 SHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISM 375
+ + L N I ++ + + L +DLS+N + + D L+SL L L N I+
Sbjct: 174 TEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYGNKITD 233
Query: 376 EPECIYVGFNTMDLELI 392
P+ ++ G T+ L L+
Sbjct: 234 LPQGVFGGLFTLQLLLL 250
Score = 133 (51.9 bits), Expect = 5.0e-15, Sum P(3) = 5.0e-15
Identities = 43/152 (28%), Positives = 70/152 (46%)
Query: 99 LLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVV 158
++DC +T +P E +T L ++ +K+I GAF L+ + L NN +S +
Sbjct: 154 IVDCRGKGLTAIPANLPEAMTEIRLELNG--IKSIPPGAFSPYRK-LRRIDLSNNQISEI 210
Query: 159 PTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTL 218
A L +L+ L L N++ L F GL +L L L+ NK+ + D L L
Sbjct: 211 APDAFQGLR-SLNSLVLYGNKITDLPQGVFGGLFTLQLLLLNANKINCIRLDAFQDLQNL 269
Query: 219 RVLRLQGNRLTVSVVAALQGLRSVTDLDLSHN 250
+L L N++ LR++ L L+ N
Sbjct: 270 SLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQN 301
Score = 131 (51.2 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 51/174 (29%), Positives = 81/174 (46%)
Query: 61 NDLCACDL--PHTLRCTANKSDLYAISESLRGLEPDERV--SLLDCTLSN--VTVLP--G 112
N C D+ PH RC A+ + SL+ + ERV + + L+N +++L G
Sbjct: 366 NSECNSDVVCPHKCRCEASMVEC----SSLKLTKIPERVPQATAELRLNNNEISILEATG 421
Query: 113 KFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDR 172
F + L + +S+ ++ I DGAF G +S + L L N L + + L L
Sbjct: 422 MFKKLTHLKKINLSNNKVSEIEDGAFEGAAS-VSELHLTANQLESIRSGMFRGLE-GLRT 479
Query: 173 LDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGN 226
L L +N++ + N SF GL ++ L L N++ T+S L L L L N
Sbjct: 480 LMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALSTLNLLAN 533
Score = 130 (50.8 bits), Expect = 5.0e-15, Sum P(3) = 5.0e-15
Identities = 35/144 (24%), Positives = 68/144 (47%)
Query: 240 RSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 299
++ +L L++N ++ +L+ LK +++++N+ S + GA G ++ L N
Sbjct: 402 QATAELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTAN 461
Query: 300 QIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITP 359
Q++ + FR L L L L +NRI + S L N+ L L N + ++
Sbjct: 462 QLESIRSGMFRGLEGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDT 521
Query: 360 LKSLQELRLDDNDISMEPECIYVG 383
L++L L L N + + ++G
Sbjct: 522 LQALSTLNLLANPFNCNCQLAWLG 545
Score = 130 (50.8 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 43/152 (28%), Positives = 73/152 (48%)
Query: 220 VLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSS 279
++ +G LT ++ A L ++T++ L N + + P L+ + +++NQ S
Sbjct: 154 IVDCRGKGLT-AIPANLP--EAMTEIRLELNGIKS-IPPGAFSPYRKLRRIDLSNNQISE 209
Query: 280 VRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNL 339
+ A GL L SL + N+I L F L TL L L N+I + + L NL
Sbjct: 210 IAPDAFQGLRSLNSLVLYGNKITDLPQGVFGGLFTLQLLLLNANKINCIRLDAFQDLQNL 269
Query: 340 TTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
+ L L N +++L + T L+++Q L L N
Sbjct: 270 SLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQN 301
Score = 123 (48.4 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 34/103 (33%), Positives = 54/103 (52%)
Query: 221 LRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSV 280
L L GN+ T+ V A L + + +DLS+N ++ L S+ +S L L +++N +
Sbjct: 628 LYLDGNQFTL-VPAQLSTFKYLQLVDLSNNKISS-LSNSSFTNMSQLTTLILSYNSLQCI 685
Query: 281 RRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 323
A GL L LS H N I L++ F +++LSHL + N
Sbjct: 686 PPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAIGAN 728
Score = 120 (47.3 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 36/128 (28%), Positives = 60/128 (46%)
Query: 199 LSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGP 258
L N + ++ +P LR + L N+++ A QGLRS+ L L N + L
Sbjct: 178 LELNGIKSIPPGAFSPYRKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYGNKITD-LPQ 236
Query: 259 STVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHL 318
L +L++L + N+ + +R A L L+ LS + N+I L +F +L + L
Sbjct: 237 GVFGGLFTLQLLLLNANKINCIRLDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTL 296
Query: 319 DLAHNRIV 326
LA N +
Sbjct: 297 HLAQNPFI 304
Score = 115 (45.5 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 36/105 (34%), Positives = 57/105 (54%)
Query: 287 GLDK-LTSLSCHHNQIDVLEDHSFRALSTLSHL---DLAHNRIVAVSGASLAHLSNLTTL 342
G+ K +T L NQ ++ LST +L DL++N+I ++S +S ++S LTTL
Sbjct: 620 GIPKNVTELYLDGNQFTLVPAQ----LSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTL 675
Query: 343 DLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTM 387
LS+N L+ + L+SL+ L L NDIS E I+ ++
Sbjct: 676 ILSYNSLQCIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSL 720
Score = 109 (43.4 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 67/261 (25%), Positives = 108/261 (41%)
Query: 125 ISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLE 184
+S ++ I AF G ++ L+ L L N + + A L L+ L L++N + +
Sbjct: 2 LSENTIQAIPRKAFRG-ATDLKNLQLDKNQIGCIEEGAFRALR-GLEVLTLNNNNITTIP 59
Query: 185 NTSFKGLSSLNFLDLSYNKLMTLSQDC-LAPLVT-LRVLRLQGNRLTVSVVAALQGLRSV 242
+SF + L L N L DC LA L LR G S A L+GL +V
Sbjct: 60 VSSFNHMPKLRTFRLHSNHLFC---DCHLAWLSQWLRQRPTIGLFTQCSGPAGLRGL-NV 115
Query: 243 TDLDLSHNLLAGP--LG--PSTVPRLSSLKVLSIAHNQFSSVRRGALAGL-----DKLTS 293
++ S +G G PS S + N R L + + +T
Sbjct: 116 AEVQKSEFSCSGQGEAGRTPSCTLSSGSCPAMCACSNGIVDCRGKGLTAIPANLPEAMTE 175
Query: 294 LSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALT 353
+ N I + +F L +DL++N+I ++ + L +L +L L N + L
Sbjct: 176 IRLELNGIKSIPPGAFSPYRKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYGNKITDLP 235
Query: 354 QDLITPLKSLQELRLDDNDIS 374
Q + L +LQ L L+ N I+
Sbjct: 236 QGVFGGLFTLQLLLLNANKIN 256
Score = 98 (39.6 bits), Expect = 2.8e-06, Sum P(3) = 2.8e-06
Identities = 31/116 (26%), Positives = 53/116 (45%)
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 317
P+ +P ++ + + N S+ GA + KL + +NQI + +F+ L +L+
Sbjct: 166 PANLPE--AMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQISEIAPDAFQGLRSLNS 223
Query: 318 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 373
L L N+I + L L L L+ N + + D L++L L L DN I
Sbjct: 224 LVLYGNKITDLPQGVFGGLFTLQLLLLNANKINCIRLDAFQDLQNLSLLSLYDNKI 279
Score = 93 (37.8 bits), Expect = 6.0e-11, Sum P(3) = 6.0e-11
Identities = 38/148 (25%), Positives = 70/148 (47%)
Query: 67 DLPHTLRCTANKSDLYAISESLRG-LEPDERVSLLDCTLSNVT-VLPGKFLEGV-TLHGL 123
+LP + T + +L I G P ++ +D + + ++ + P F +G+ +L+ L
Sbjct: 168 NLPEAM--TEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQISEIAPDAF-QGLRSLNSL 224
Query: 124 VISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKL 183
V+ ++ ++ G F GL + LQ L L N ++ + A L NL L L N++ L
Sbjct: 225 VLYGNKITDLPQGVFGGLFT-LQLLLLNANKINCIRLDAFQDLQ-NLSLLSLYDNKIQSL 282
Query: 184 ENTSFKGLSSLNFLDLSYNKLMTLSQDC 211
+F L ++ L L+ N + DC
Sbjct: 283 AKGTFTSLRAIQTLHLAQNPFIC---DC 307
Score = 92 (37.4 bits), Expect = 4.7e-14, Sum P(3) = 4.7e-14
Identities = 24/101 (23%), Positives = 52/101 (51%)
Query: 294 LSCHHNQIDVLEDHS-FRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRAL 352
L ++N+I +LE F+ L+ L ++L++N++ + + ++++ L L+ N L ++
Sbjct: 407 LRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESI 466
Query: 353 TQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELIY 393
+ L+ L+ L L +N IS + G + L +Y
Sbjct: 467 RSGMFRGLEGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLY 507
Score = 89 (36.4 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 29/116 (25%), Positives = 54/116 (46%)
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 317
P +P+ ++ L + NQF+ V L+ L + +N+I L + SF +S L+
Sbjct: 618 PKGIPK--NVTELYLDGNQFTLVP-AQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTT 674
Query: 318 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 373
L L++N + + + L +L L L N + L + + + SL L + N +
Sbjct: 675 LILSYNSLQCIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAIGANPL 730
Score = 80 (33.2 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 21/79 (26%), Positives = 35/79 (44%)
Query: 174 DLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVV 233
DLS N + + +F+G + L L L N++ + + L L VL L N +T V
Sbjct: 1 DLSENTIQAIPRKAFRGATDLKNLQLDKNQIGCIEEGAFRALRGLEVLTLNNNNITTIPV 60
Query: 234 AALQGLRSVTDLDLSHNLL 252
++ + + L N L
Sbjct: 61 SSFNHMPKLRTFRLHSNHL 79
Score = 74 (31.1 bits), Expect = 4.5e-10, Sum P(2) = 4.5e-10
Identities = 15/48 (31%), Positives = 27/48 (56%)
Query: 645 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
+S+ L + NQ S+R G GL+ L +L +N+I + + SF+ +
Sbjct: 451 ASVSELHLTANQLESIRSGMFRGLEGLRTLMLRNNRISCIHNDSFTGL 498
Score = 71 (30.1 bits), Expect = 9.3e-10, Sum P(2) = 9.3e-10
Identities = 17/77 (22%), Positives = 37/77 (48%)
Query: 618 VAQQEDDINRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCH 677
V Q ++ NN++ ++ L+ LK +++++N+ S + GA G ++ L
Sbjct: 400 VPQATAELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLT 459
Query: 678 HNQIDVLEDHSFSNVIG 694
NQ++ + F + G
Sbjct: 460 ANQLESIRSGMFRGLEG 476
Score = 67 (28.6 bits), Expect = 5.0e-15, Sum P(3) = 5.0e-15
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
+S L L +++N + A GL L LS H N I L++ F++V
Sbjct: 669 MSQLTTLILSYNSLQCIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADV 717
Score = 63 (27.2 bits), Expect = 6.2e-09, Sum P(2) = 6.2e-09
Identities = 20/75 (26%), Positives = 34/75 (45%)
Query: 315 LSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 374
++ L L N+ V A L+ L +DLS+N + +L+ T + L L L N +
Sbjct: 625 VTELYLDGNQFTLVP-AQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNSLQ 683
Query: 375 MEPECIYVGFNTMDL 389
P + G ++ L
Sbjct: 684 CIPPLAFQGLRSLRL 698
Score = 62 (26.9 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L+ L + +N+ S + + GL + LS + NQI + +F +
Sbjct: 474 LEGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTL 522
Score = 57 (25.1 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L +L++L + N+ + +R A L L+ LS + N+I L +F+++
Sbjct: 242 LFTLQLLLLNANKINCIRLDAFQDLQNLSLLSLYDNKIQSLAKGTFTSL 290
Score = 48 (22.0 bits), Expect = 4.0e-12, Sum P(3) = 4.0e-12
Identities = 10/32 (31%), Positives = 21/32 (65%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLS 675
L ++++LS+ NQ +++ GA L L++L+
Sbjct: 498 LRNVRLLSLYDNQIATISPGAFDTLQALSTLN 529
>UNIPROTKB|Q6UY18 [details] [associations]
symbol:LINGO4 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 4" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 EMBL:AL589765
HSSP:Q9BZR6 HOGENOM:HOG000246971 HOVERGEN:HBG057546 EMBL:AY358115
IPI:IPI00258050 RefSeq:NP_001004432.1 UniGene:Hs.591477
ProteinModelPortal:Q6UY18 SMR:Q6UY18 STRING:Q6UY18
PhosphoSite:Q6UY18 DMDM:74762377 PRIDE:Q6UY18
Ensembl:ENST00000368820 GeneID:339398 KEGG:hsa:339398
UCSC:uc001ezf.1 CTD:339398 GeneCards:GC01M151775 HGNC:HGNC:31814
MIM:609794 neXtProt:NX_Q6UY18 PharmGKB:PA162394098 eggNOG:NOG306417
InParanoid:Q6UY18 OMA:EPPNGTL OrthoDB:EOG49KFQ7 GenomeRNAi:339398
NextBio:97381 Bgee:Q6UY18 CleanEx:HS_LINGO4 Genevestigator:Q6UY18
Uniprot:Q6UY18
Length = 593
Score = 225 (84.3 bits), Expect = 5.3e-15, Sum P(2) = 5.3e-15
Identities = 92/281 (32%), Positives = 130/281 (46%)
Query: 98 SLLDCTLSNVTVLPG-KFLEGVTLHGLVISSGELKNISDGAFIGLS-------SPLQALG 149
++ DCT VL G + LE V GL + + EL ++S GL S LQ L
Sbjct: 33 AVCDCTSQPQAVLCGHRQLEAVP-GGLPLDT-ELLDLSGNRLWGLQQGMLSRLSLLQELD 90
Query: 150 LPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQ 209
L N LS + A L +L L L N+L + F GLS+L LDL N+++
Sbjct: 91 LSYNQLSTLEPGAFHGLQ-SLLTLRLQGNRLRIMGPGVFSGLSALTLLDLRLNQIVLFLD 149
Query: 210 DCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSH-NLLAGPLGPSTVPRLSSLK 268
L +L+ L + N L A GL ++ L L NL P G + + RL +L
Sbjct: 150 GAFGELGSLQKLEVGDNHLVFVAPGAFAGLAKLSTLTLERCNLSTVP-GLA-LARLPALV 207
Query: 269 VLSIAHNQFSSVRRGALAGLDKLTSLSCH-HNQIDVLEDHSFRALSTLSHLDLAHNRIVA 327
L + + GAL GL +L L H ++ L+ S L+ LS L + + +
Sbjct: 208 ALRLRELDIGRLPAGALRGLGQLKELEIHLWPSLEALDPGSLVGLN-LSSLAITRCNLSS 266
Query: 328 VSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRL 368
V +L HLS L LDLS N + A+ ++PL LQELRL
Sbjct: 267 VPFQALYHLSFLRVLDLSQNPISAIPARRLSPLVRLQELRL 307
Score = 206 (77.6 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 83/253 (32%), Positives = 116/253 (45%)
Query: 142 SSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSY 201
S P QA+ + L VP PL L LDLS N+L+ L+ LS L LDLSY
Sbjct: 39 SQP-QAVLCGHRQLEAVPGGL--PLDTEL--LDLSGNRLWGLQQGMLSRLSLLQELDLSY 93
Query: 202 NKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTV 261
N+L TL L +L LRLQGNRL + GL ++T LDL N + L
Sbjct: 94 NQLSTLEPGAFHGLQSLLTLRLQGNRLRIMGPGVFSGLSALTLLDLRLNQIVLFLD-GAF 152
Query: 262 PRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 321
L SL+ L + N V GA AGL KL++L+ + + + L L L L
Sbjct: 153 GELGSLQKLEVGDNHLVFVAPGAFAGLAKLSTLTLERCNLSTVPGLALARLPALVALRLR 212
Query: 322 HNRIVAVSGASLAHLSNLTTLDLSHNF--LRALTQDLITPLKSLQELRLDDNDISMEP-E 378
I + +L L L L++ H + L AL + L +L L + ++S P +
Sbjct: 213 ELDIGRLPAGALRGLGQLKELEI-HLWPSLEALDPGSLVGL-NLSSLAITRCNLSSVPFQ 270
Query: 379 CIY-VGF-NTMDL 389
+Y + F +DL
Sbjct: 271 ALYHLSFLRVLDL 283
Score = 145 (56.1 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 50/146 (34%), Positives = 68/146 (46%)
Query: 111 PGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNL 170
PG L G+ L L I+ L ++ A LS L+ L L N +S +P L+PL L
Sbjct: 246 PGS-LVGLNLSSLAITRCNLSSVPFQALYHLSF-LRVLDLSQNPISAIPARRLSPLV-RL 302
Query: 171 DRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTV 230
L LS L + +F GL++ + LD++ N L TL + L LRL GN LT
Sbjct: 303 QELRLSGACLTSIAAHAFHGLTAFHLLDVADNALQTLEETAFPSPDKLVTLRLSGNPLTC 362
Query: 231 SV-VAALQGLRSVTDLDLSHNLLAGP 255
+ L LR D +S AGP
Sbjct: 363 DCRLLWLLRLRRHLDFGMSPPACAGP 388
Score = 128 (50.1 bits), Expect = 0.00011, P = 0.00011
Identities = 72/244 (29%), Positives = 105/244 (43%)
Query: 111 PGKF--LEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAP 168
PG F L +TL L ++ ++ DGAF L S LQ L + +N L V A A LA
Sbjct: 125 PGVFSGLSALTLLDLRLN--QIVLFLDGAFGELGS-LQKLEVGDNHLVFVAPGAFAGLA- 180
Query: 169 NLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRL 228
L L L L + + L +L L L + L L L L+ L + L
Sbjct: 181 KLSTLTLERCNLSTVPGLALARLPALVALRLRELDIGRLPAGALRGLGQLKELEIH---L 237
Query: 229 TVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVP-----RLSSLKVLSIAHNQFSSVRRG 283
S+ A G S+ L+LS +L S+VP LS L+VL ++ N S++
Sbjct: 238 WPSLEALDPG--SLVGLNLS-SLAITRCNLSSVPFQALYHLSFLRVLDLSQNPISAIPAR 294
Query: 284 ALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLD 343
L+ L +L L + + H+F L+ LD+A N + + + L TL
Sbjct: 295 RLSPLVRLQELRLSGACLTSIAAHAFHGLTAFHLLDVADNALQTLEETAFPSPDKLVTLR 354
Query: 344 LSHN 347
LS N
Sbjct: 355 LSGN 358
Score = 47 (21.6 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 20/65 (30%), Positives = 30/65 (46%)
Query: 625 INRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL 684
I R N S V QA LS L+VL ++ N S++ L+ L +L L + +
Sbjct: 259 ITRCNLSS--VPFQAL-YHLSFLRVLDLSQNPISAIPARRLSPLVRLQELRLSGACLTSI 315
Query: 685 EDHSF 689
H+F
Sbjct: 316 AAHAF 320
Score = 43 (20.2 bits), Expect = 5.3e-15, Sum P(2) = 5.3e-15
Identities = 10/38 (26%), Positives = 18/38 (47%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
L++ +L +A N ++ A DKL +L N +
Sbjct: 323 LTAFHLLDVADNALQTLEETAFPSPDKLVTLRLSGNPL 360
>UNIPROTKB|F1LS74 [details] [associations]
symbol:Slit1 "Slit homolog 1 protein" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
RGD:69307 GO:GO:0005737 GO:GO:0005615 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045
PROSITE:PS01186 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
IPI:IPI00389760 Ensembl:ENSRNOT00000034758 ArrayExpress:F1LS74
Uniprot:F1LS74
Length = 1417
Score = 158 (60.7 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 70/263 (26%), Positives = 107/263 (40%)
Query: 145 LQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKL 204
L L L N L VP A A +L L L NQ+ +E +F+ L L L L+ N +
Sbjct: 21 LSRLDLSENSLQAVPRKAFRG-ATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNI 79
Query: 205 MTLSQDCLAPLVTLRVLRLQGNRLTVSV-VAAL-QGLRSVTDLDLSHNLLAGPLGPSTVP 262
T+ + LR RL N L +A L Q LR + L +GP
Sbjct: 80 TTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGL-FTQCSGPAS----- 133
Query: 263 RLSSLKVLSIAHNQFSSVRRGALAGLDKLT--------SLSCHHNQIDVLEDHSFRAL-- 312
L L V + ++FS +G A + T SC + +D A+
Sbjct: 134 -LRGLNVAEVQKSEFSCSGQGEAAQVPACTLSSGSCPAMCSCSNGIVDC-RGKGLTAIPA 191
Query: 313 ---STLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLD 369
T++ + L N I ++ + + L +DLS+N + + D L+SL L L
Sbjct: 192 NLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLY 251
Query: 370 DNDISMEPECIYVGFNTMDLELI 392
N I+ P ++ G T+ L L+
Sbjct: 252 GNKITDLPRGVFGGLYTLQLLLL 274
Score = 153 (58.9 bits), Expect = 5.4e-14, Sum P(3) = 5.4e-14
Identities = 43/137 (31%), Positives = 70/137 (51%)
Query: 141 LSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLS 200
L + + L N + +P A +P L R+DLS+NQ+ ++ +F+GL SLN L L
Sbjct: 193 LPETMTEIRLELNGIKSIPPGAFSPYR-KLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLY 251
Query: 201 YNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPST 260
NK+ L + L TL++L L N++ A Q L++++ L L N + L T
Sbjct: 252 GNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQS-LAKGT 310
Query: 261 VPRLSSLKVLSIAHNQF 277
L +++ L +A N F
Sbjct: 311 FTSLRAIQTLHLAQNPF 327
Score = 144 (55.7 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 38/131 (29%), Positives = 72/131 (54%)
Query: 148 LGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTL 207
L L NN +S++ + L +L +++LS+N++ ++E+ +F+G +S++ L L+ N+L ++
Sbjct: 431 LRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLESV 490
Query: 208 SQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSL 267
L LR L L+ NR++ + GLR+V L L N + + P L +L
Sbjct: 491 RSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHIT-TISPGAFDTLQAL 549
Query: 268 KVLSIAHNQFS 278
L++ N F+
Sbjct: 550 STLNLLANPFN 560
Score = 139 (54.0 bits), Expect = 1.3e-12, Sum P(3) = 1.3e-12
Identities = 37/144 (25%), Positives = 68/144 (47%)
Query: 240 RSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 299
+S T+L L++N ++ +LS LK +++++N+ S + G G ++ L N
Sbjct: 426 QSTTELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTAN 485
Query: 300 QIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITP 359
Q++ + FR L L L L +NRI + S L N+ L L N + ++
Sbjct: 486 QLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDT 545
Query: 360 LKSLQELRLDDNDISMEPECIYVG 383
L++L L L N + + ++G
Sbjct: 546 LQALSTLNLLANPFNCNCQLAWLG 569
Score = 127 (49.8 bits), Expect = 7.7e-13, Sum P(3) = 7.7e-13
Identities = 42/152 (27%), Positives = 73/152 (48%)
Query: 220 VLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSS 279
++ +G LT ++ A L ++T++ L N + + P L+ + +++NQ +
Sbjct: 178 IVDCRGKGLT-AIPANLP--ETMTEIRLELNGIKS-IPPGAFSPYRKLRRIDLSNNQIAE 233
Query: 280 VRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNL 339
+ A GL L SL + N+I L F L TL L L N+I + + L NL
Sbjct: 234 IAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNL 293
Query: 340 TTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
+ L L N +++L + T L+++Q L L N
Sbjct: 294 SLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQN 325
Score = 122 (48.0 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 50/174 (28%), Positives = 78/174 (44%)
Query: 61 NDLCACDL--PHTLRCTANKSDLYAISESLRGLEPDERV--SLLDCTLSN--VTVLP--G 112
N C D+ PH RC A+ + + S + ER+ S + L+N +++L G
Sbjct: 390 NSECTSDVACPHKCRCEASVVECSGLKLS----KIPERIPQSTTELRLNNNEISILEATG 445
Query: 113 KFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDR 172
F + L + +S+ ++ I DG F G +S + L L N L V + L L
Sbjct: 446 LFKKLSHLKKINLSNNKVSEIEDGTFEGATS-VSELHLTANQLESVRSGMFRGL-DGLRT 503
Query: 173 LDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGN 226
L L +N++ + N SF GL ++ L L N + T+S L L L L N
Sbjct: 504 LMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLAN 557
Score = 118 (46.6 bits), Expect = 2.3e-10, Sum P(3) = 2.3e-10
Identities = 36/128 (28%), Positives = 59/128 (46%)
Query: 199 LSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGP 258
L N + ++ +P LR + L N++ A QGLRS+ L L N + L
Sbjct: 202 LELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITD-LPR 260
Query: 259 STVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHL 318
L +L++L + N+ + +R A L L+ LS + N+I L +F +L + L
Sbjct: 261 GVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTL 320
Query: 319 DLAHNRIV 326
LA N +
Sbjct: 321 HLAQNPFI 328
Score = 117 (46.2 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 32/103 (31%), Positives = 53/103 (51%)
Query: 221 LRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSV 280
L L GN+ T+ V L + + +DLS+N ++ L S+ +S L L +++N +
Sbjct: 652 LYLDGNQFTL-VPGQLSTFKYLQLVDLSNNKISS-LSNSSFTNMSQLTTLILSYNALQCI 709
Query: 281 RRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 323
A GL L LS H N + L++ F +++LSHL + N
Sbjct: 710 PPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAIGAN 752
Score = 115 (45.5 bits), Expect = 3.4e-14, Sum P(3) = 3.4e-14
Identities = 35/105 (33%), Positives = 57/105 (54%)
Query: 287 GLDK-LTSLSCHHNQIDVLEDHSFRALSTLSHL---DLAHNRIVAVSGASLAHLSNLTTL 342
G+ K +T L NQ ++ LST +L DL++N+I ++S +S ++S LTTL
Sbjct: 644 GIPKNVTELYLDGNQFTLVPGQ----LSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTL 699
Query: 343 DLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTM 387
LS+N L+ + L+SL+ L L ND+S E I+ ++
Sbjct: 700 ILSYNALQCIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSL 744
Score = 115 (45.5 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 29/84 (34%), Positives = 41/84 (48%)
Query: 266 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 325
+L L ++ N +V R A G L +L NQI +E+ +FRAL L L L +N I
Sbjct: 20 ALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNI 79
Query: 326 VAVSGASLAHLSNLTTLDLSHNFL 349
+ +S H+ L T L N L
Sbjct: 80 TTIPVSSFNHMPKLRTFRLHSNHL 103
Score = 115 (45.5 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 64/281 (22%), Positives = 115/281 (40%)
Query: 108 TVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLA 167
++ PG F L + +S+ ++ I+ AF GL S L +L L N ++ +P L
Sbjct: 209 SIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRS-LNSLVLYGNKITDLPRGVFGGLY 267
Query: 168 PNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNR 227
L L L+ N++ + +F+ L +L+ L L NK+ +L++ L ++ L L N
Sbjct: 268 -TLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQNP 326
Query: 228 LTVSV-VAALQGLRSVTDLDLSHNLLAGP--LGPSTVPRLSSLKVLSIAHNQFSSVRRGA 284
+ L ++ + A P L + ++ S K A Q+
Sbjct: 327 FICDCNLKWLADFLRTNPIETTGARCASPRRLANKRIGQIKSKKFRCSAKEQYFIPGTED 386
Query: 285 LAGLDKLTS-LSCHHN---QIDVLEDHSF-------RALSTLSHLDLAHNRIVAVSGASL 333
+ TS ++C H + V+E R + + L L +N I + L
Sbjct: 387 YHLNSECTSDVACPHKCRCEASVVECSGLKLSKIPERIPQSTTELRLNNNEISILEATGL 446
Query: 334 -AHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 373
LS+L ++LS+N + + S+ EL L N +
Sbjct: 447 FKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQL 487
Score = 106 (42.4 bits), Expect = 7.1e-15, Sum P(4) = 7.1e-15
Identities = 35/140 (25%), Positives = 62/140 (44%)
Query: 160 TSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLR 219
T+ A L + + L N + + +F L +DLS N++ ++ D L +L
Sbjct: 187 TAIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLN 246
Query: 220 VLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSS 279
L L GN++T GL ++ L L+ N + + P L +L +LS+ N+ S
Sbjct: 247 SLVLYGNKITDLPRGVFGGLYTLQLLLLNANKI-NCIRPDAFQDLQNLSLLSLYDNKIQS 305
Query: 280 VRRGALAGLDKLTSLSCHHN 299
+ +G L + +L N
Sbjct: 306 LAKGTFTSLRAIQTLHLAQN 325
Score = 102 (41.0 bits), Expect = 7.1e-15, Sum P(4) = 7.1e-15
Identities = 30/106 (28%), Positives = 53/106 (50%)
Query: 77 NKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVT-LHGLVISSGELKNISD 135
N++ L + E L + ++ +S LD + +++ +P K G T L L + ++ I +
Sbjct: 3 NRNQLQVLPELL--FQNNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEE 60
Query: 136 GAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLY 181
GAF L L+ L L NN ++ +P S+ + P L L N L+
Sbjct: 61 GAFRALRG-LEVLTLNNNNITTIPVSSFNHM-PKLRTFRLHSNHLF 104
Score = 101 (40.6 bits), Expect = 7.1e-15, Sum P(4) = 7.1e-15
Identities = 29/115 (25%), Positives = 56/115 (48%)
Query: 292 TSLSCHHNQIDVLEDHS-FRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLR 350
T L ++N+I +LE F+ LS L ++L++N++ + + ++++ L L+ N L
Sbjct: 429 TELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLE 488
Query: 351 ALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELIYSGVWRHSTLLIP 405
++ + L L+ L L +N IS + G + L +Y H T + P
Sbjct: 489 SVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDN---HITTISP 540
Score = 97 (39.2 bits), Expect = 3.6e-08, Sum P(3) = 3.6e-08
Identities = 31/116 (26%), Positives = 53/116 (45%)
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 317
P+ +P ++ + + N S+ GA + KL + +NQI + +F+ L +L+
Sbjct: 190 PANLPE--TMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNS 247
Query: 318 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 373
L L N+I + L L L L+ N + + D L++L L L DN I
Sbjct: 248 LVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKI 303
Score = 94 (38.1 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 30/116 (25%), Positives = 55/116 (47%)
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 317
P +P+ ++ L + NQF+ V G L+ L + +N+I L + SF +S L+
Sbjct: 642 PKGIPK--NVTELYLDGNQFTLVP-GQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTT 698
Query: 318 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 373
L L++N + + + L +L L L N + L + + + SL L + N +
Sbjct: 699 LILSYNALQCIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAIGANPL 754
Score = 87 (35.7 bits), Expect = 4.6e-07, Sum P(3) = 4.6e-07
Identities = 27/99 (27%), Positives = 50/99 (50%)
Query: 175 LSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVA 234
L+ NQL L F+ +L+ LDLS N L + + L+ L+L N+++
Sbjct: 2 LNRNQLQVLPELLFQNNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEG 61
Query: 235 ALQGLRSVTDLDLSHNLLAG-PLGP-STVPRLSSLKVLS 271
A + LR + L L++N + P+ + +P+L + ++ S
Sbjct: 62 AFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHS 100
Score = 80 (33.2 bits), Expect = 7.7e-13, Sum P(3) = 7.7e-13
Identities = 20/66 (30%), Positives = 36/66 (54%)
Query: 628 NNSDSRYVKLQATTIL-LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLED 686
N S+++ +++ T +S+ L + NQ SVR G GLD L +L +N+I + +
Sbjct: 457 NLSNNKVSEIEDGTFEGATSVSELHLTANQLESVRSGMFRGLDGLRTLMLRNNRISCIHN 516
Query: 687 HSFSNV 692
SF+ +
Sbjct: 517 DSFTGL 522
Score = 72 (30.4 bits), Expect = 5.0e-12, Sum P(3) = 5.0e-12
Identities = 19/79 (24%), Positives = 39/79 (49%)
Query: 618 VAQQEDDINRNNSDSRYVKLQATTIL--LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLS 675
+ Q ++ NN++ L+AT + LS LK +++++N+ S + G G ++ L
Sbjct: 424 IPQSTTELRLNNNEISI--LEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELH 481
Query: 676 CHHNQIDVLEDHSFSNVIG 694
NQ++ + F + G
Sbjct: 482 LTANQLESVRSGMFRGLDG 500
Score = 65 (27.9 bits), Expect = 7.1e-15, Sum P(4) = 7.1e-15
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
+S L L +++N + A GL L LS H N + L++ F++V
Sbjct: 693 MSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADV 741
Score = 63 (27.2 bits), Expect = 3.7e-10, Sum P(3) = 3.7e-10
Identities = 20/75 (26%), Positives = 34/75 (45%)
Query: 315 LSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 374
++ L L N+ V G L+ L +DLS+N + +L+ T + L L L N +
Sbjct: 649 VTELYLDGNQFTLVPG-QLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQ 707
Query: 375 MEPECIYVGFNTMDL 389
P + G ++ L
Sbjct: 708 CIPPLAFQGLRSLRL 722
Score = 57 (25.1 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L +L++L + N+ + +R A L L+ LS + N+I L +F+++
Sbjct: 266 LYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSL 314
Score = 46 (21.3 bits), Expect = 5.6e-13, Sum P(4) = 5.6e-13
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 655 NQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
NQF+ V G L+ L + +N+I L + SF+N+
Sbjct: 657 NQFTLVP-GQLSTFKYLQLVDLSNNKISSLSNSSFTNM 693
>UNIPROTKB|F1RHM5 [details] [associations]
symbol:RTN4R "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0009986 "cell surface" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005783 GO:GO:0005886
GO:GO:0009986 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101803 OMA:PLWAWLQ EMBL:CT737345
Ensembl:ENSSSCT00000011101 Uniprot:F1RHM5
Length = 473
Score = 219 (82.2 bits), Expect = 7.7e-15, P = 7.7e-15
Identities = 75/237 (31%), Positives = 106/237 (44%)
Query: 136 GAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLN 195
GA + + P P L VP P A R+ L N++ + SF+ +L
Sbjct: 29 GACVCYNEPKVTTSCPQQGLQAVPADI--PAASQ--RVFLHGNRITYVPAASFRACRNLT 84
Query: 196 FLDLSYNKLMTLSQDCLAPLVTLRVLRLQGN-RLTVSVVAALQGLRSVTDLDLSHNLLAG 254
L L N L + A LV L L L N +L A +GL + L L L
Sbjct: 85 ILWLHSNALARIDATAFAGLVLLEQLDLSDNAQLRAVDPATFRGLGRLHTLHLDRCGLQ- 143
Query: 255 PLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALST 314
LGP L++L+ L + N ++ A L LT L H N+I + + +FR L +
Sbjct: 144 ELGPGLFRGLAALQYLYLQDNGLQALPDDAFRDLGNLTHLFLHGNRIPSVPERAFRGLHS 203
Query: 315 LSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
L L L NR+ V + L L TL L N L AL+ + + PL++LQ LRL+DN
Sbjct: 204 LDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALSAEALAPLRALQYLRLNDN 260
Score = 133 (51.9 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 48/157 (30%), Positives = 64/157 (40%)
Query: 218 LRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQF 277
L +L L N L A GL + LDLS N + P+T L L L +
Sbjct: 83 LTILWLHSNALARIDATAFAGLVLLEQLDLSDNAQLRAVDPATFRGLGRLHTLHLDRCGL 142
Query: 278 SSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLS 337
+ G GL L L N + L D +FR L L+HL L NRI +V + L
Sbjct: 143 QELGPGLFRGLAALQYLYLQDNGLQALPDDAFRDLGNLTHLFLHGNRIPSVPERAFRGLH 202
Query: 338 NLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 374
+L L L N + + L L L L N++S
Sbjct: 203 SLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLS 239
>ZFIN|ZDB-GENE-080327-16 [details] [associations]
symbol:lingo1a "leucine rich repeat and Ig domain
containing 1a" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0031103 "axon regeneration"
evidence=IMP] InterPro:IPR007110 PROSITE:PS50835
ZFIN:ZDB-GENE-080327-16 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 GO:GO:0031103
InterPro:IPR026906 Pfam:PF13306 GeneTree:ENSGT00690000101682
EMBL:BX005076 EMBL:CR759783 IPI:IPI01024439
Ensembl:ENSDART00000149965 Bgee:F8W4D7 Uniprot:F8W4D7
Length = 619
Score = 217 (81.4 bits), Expect = 9.1e-15, Sum P(2) = 9.1e-15
Identities = 89/321 (27%), Positives = 146/321 (45%)
Query: 64 CACDLPH-TLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNV-TVLPGKFLEGVTLH 121
C C++ ++ C K L ++ E + P E LLD + + + T+ P +F L
Sbjct: 43 CECNVQERSVLCHRKK--LMSVPEGI----PSE-TRLLDLSKNRIKTINPDEFSAFPQLE 95
Query: 122 GLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLY 181
L ++ + I GAF L LQ LGL +N L ++ L+ NL +LD+S N++
Sbjct: 96 ELELNENTISAIEPGAFNNLYG-LQTLGLRSNKLKLIQLGVFTGLS-NLTKLDISENKIV 153
Query: 182 KLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRS 241
L + F+ L +L L++ N L+ +S L +L L L+ LT A L S
Sbjct: 154 ILLDYMFQDLYNLRSLEVGDNDLVFISHRAFHGLSSLEQLTLEKCNLTSVPTEAFTHLHS 213
Query: 242 VTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQF-SSVRRGALAGLDKLTSLSCHHNQ 300
+ L L NL + + RL LKVL IA+ + ++ L GL+ LTSL+ +
Sbjct: 214 LVTLRL-RNLNINSIRDYSFKRLYRLKVLEIANWPYLDTMTTNCLYGLN-LTSLTITNAN 271
Query: 301 IDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPL 360
+ + + R L L L++++N I + G L L L L L L + L
Sbjct: 272 LTSIPYLALRHLVYLRFLNMSYNPIQMIEGNRLHDLLRLQELYLVGGRLSVIEPYSFRGL 331
Query: 361 KSLQELRLDDNDISMEPECIY 381
L+ L + N ++ E ++
Sbjct: 332 NYLKVLNVSSNFLTTLEESVF 352
Score = 196 (74.1 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 76/288 (26%), Positives = 133/288 (46%)
Query: 95 ERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNL 154
E + L + T+S + PG F L L + S +LK I G F GLS+ L L + N
Sbjct: 95 EELELNENTISAIE--PGAFNNLYGLQTLGLRSNKLKLIQLGVFTGLSN-LTKLDISENK 151
Query: 155 LSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAP 214
+ ++ L NL L++ N L + + +F GLSSL L L L ++ +
Sbjct: 152 IVILLDYMFQDLY-NLRSLEVGDNDLVFISHRAFHGLSSLEQLTLEKCNLTSVPTEAFTH 210
Query: 215 LVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAH 274
L +L LRL+ + + + L + L++++ + + + L+ L L+I +
Sbjct: 211 LHSLVTLRLRNLNINSIRDYSFKRLYRLKVLEIANWPYLDTMTTNCLYGLN-LTSLTITN 269
Query: 275 NQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLA 334
+S+ AL L L L+ +N I ++E + L L L L R+ + S
Sbjct: 270 ANLTSIPYLALRHLVYLRFLNMSYNPIQMIEGNRLHDLLRLQELYLVGGRLSVIEPYSFR 329
Query: 335 HLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYV 382
L+ L L++S NFL L + + + +L+ L L DN ++ + ++V
Sbjct: 330 GLNYLKVLNVSSNFLTTLEESVFHSVGNLETLALHDNPLACDCRLLWV 377
Score = 154 (59.3 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 72/293 (24%), Positives = 123/293 (41%)
Query: 173 LDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSV 232
LDLS N++ + F L L+L+ N + + L L+ L L+ N+L +
Sbjct: 73 LDLSKNRIKTINPDEFSAFPQLEELELNENTISAIEPGAFNNLYGLQTLGLRSNKLKLIQ 132
Query: 233 VAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLT 292
+ GL ++T LD+S N + L L +L+ L + N + A GL L
Sbjct: 133 LGVFTGLSNLTKLDISENKIVILLD-YMFQDLYNLRSLEVGDNDLVFISHRAFHGLSSLE 191
Query: 293 SLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSH-NFLRA 351
L+ + + +F L +L L L + I ++ S L L L++++ +L
Sbjct: 192 QLTLEKCNLTSVPTEAFTHLHSLVTLRLRNLNINSIRDYSFKRLYRLKVLEIANWPYLDT 251
Query: 352 LTQDLITPLKSLQELRLDDNDISMEP-----ECIYVGFNTMDLELIY--SGVWRHSTLLI 404
+T + + L +L L + + +++ P +Y+ F M I G H L +
Sbjct: 252 MTTNCLYGL-NLTSLTITNANLTSIPYLALRHLVYLRFLNMSYNPIQMIEGNRLHDLLRL 310
Query: 405 PVMLSLCTRSSVVTRY-----RYCVVLIEGSNIL---DQSAL-VLGCSEILAL 448
+ + R SV+ Y Y VL SN L ++S +G E LAL
Sbjct: 311 QELYLVGGRLSVIEPYSFRGLNYLKVLNVSSNFLTTLEESVFHSVGNLETLAL 363
Score = 131 (51.2 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 33/131 (25%), Positives = 61/131 (46%)
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 317
P +P S ++L ++ N+ ++ + +L L + N I +E +F L L
Sbjct: 63 PEGIP--SETRLLDLSKNRIKTINPDEFSAFPQLEELELNENTISAIEPGAFNNLYGLQT 120
Query: 318 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEP 377
L L N++ + LSNLT LD+S N + L + L +L+ L + DND+
Sbjct: 121 LGLRSNKLKLIQLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLRSLEVGDNDLVFIS 180
Query: 378 ECIYVGFNTMD 388
+ G ++++
Sbjct: 181 HRAFHGLSSLE 191
Score = 55 (24.4 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
LSSL+ L++ +SV A L L +L + I+ + D+SF +
Sbjct: 187 LSSLEQLTLEKCNLTSVPTEAFTHLHSLVTLRLRNLNINSIRDYSFKRL 235
Score = 50 (22.7 bits), Expect = 9.1e-15, Sum P(2) = 9.1e-15
Identities = 10/38 (26%), Positives = 21/38 (55%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
L+ LKVL+++ N +++ + L +L+ H N +
Sbjct: 331 LNYLKVLNVSSNFLTTLEESVFHSVGNLETLALHDNPL 368
Score = 45 (20.9 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 11/43 (25%), Positives = 22/43 (51%)
Query: 647 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
L+ L++++N + L L +L L ++ V+E +SF
Sbjct: 286 LRFLNMSYNPIQMIEGNRLHDLLRLQELYLVGGRLSVIEPYSF 328
Score = 41 (19.5 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 13/49 (26%), Positives = 23/49 (46%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L+ L + + S + + GL+ L L+ N + LE+ F +V
Sbjct: 307 LLRLQELYLVGGRLSVIEPYSFRGLNYLKVLNVSSNFLTTLEESVFHSV 355
>UNIPROTKB|O75473 [details] [associations]
symbol:LGR5 "Leucine-rich repeat-containing G-protein
coupled receptor 5" species:9606 "Homo sapiens" [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0048839
"inner ear development" evidence=IEA] [GO:0004930 "G-protein
coupled receptor activity" evidence=TAS] [GO:0005887 "integral to
plasma membrane" evidence=TAS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=TAS] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0005887
GO:GO:0004930 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0048839
GO:GO:0016500 InterPro:IPR026906 Pfam:PF13306 HOVERGEN:HBG031675
HOGENOM:HOG000231829 EMBL:AF062006 EMBL:AF061444 EMBL:AC078860
EMBL:AC090116 EMBL:BC096324 EMBL:BC096325 EMBL:BC096326
EMBL:BC099650 IPI:IPI00021131 IPI:IPI00940760 PIR:JE0176
RefSeq:NP_003658.1 UniGene:Hs.658889 ProteinModelPortal:O75473
SMR:O75473 STRING:O75473 PhosphoSite:O75473 PRIDE:O75473
Ensembl:ENST00000266674 Ensembl:ENST00000540815 GeneID:8549
KEGG:hsa:8549 UCSC:uc001swl.3 UCSC:uc001swm.3 CTD:8549
GeneCards:GC12P071833 HGNC:HGNC:4504 HPA:HPA012530 MIM:606667
neXtProt:NX_O75473 PharmGKB:PA28894 InParanoid:O75473 KO:K04308
OMA:FNPHFKE OrthoDB:EOG46143B PhylomeDB:O75473 GenomeRNAi:8549
NextBio:32032 ArrayExpress:O75473 Bgee:O75473 CleanEx:HS_LGR5
Genevestigator:O75473 GermOnline:ENSG00000139292 Uniprot:O75473
Length = 907
Score = 221 (82.9 bits), Expect = 9.1e-15, Sum P(2) = 9.1e-15
Identities = 100/335 (29%), Positives = 142/335 (42%)
Query: 64 CACDLPHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVT-VLPGKFLEGVTLHG 122
C C+ + + SDL +SE L S LD +++N++ +LP L
Sbjct: 38 CHCEPDGRMLLRVDCSDL-GLSELPSNLSVF--TSYLDLSMNNISQLLPNPLPSLRFLEE 94
Query: 123 LVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYK 182
L ++ L I GAF GL S L+ L L NN L VPT AL L +L L L N +
Sbjct: 95 LRLAGNALTYIPKGAFTGLYS-LKVLMLQNNQLRHVPTEALQNLR-SLQSLRLDANHISY 152
Query: 183 LENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSV 242
+ + F GL SL L L N L + L L+ + L N++ A L S+
Sbjct: 153 VPPSCFSGLHSLRHLWLDDNALTEIPVQAFRSLSALQAMTLALNKIHHIPDYAFGNLSSL 212
Query: 243 TDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID 302
L L HN LG L SL+ L + +N A+ L L L H N I
Sbjct: 213 VVLHL-HNNRIHSLGKKCFDGLHSLETLDLNYNNLDEFPT-AIRTLSNLKELGFHSNNIR 270
Query: 303 VLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQ--DLITPL 360
+ + +F +L + N I V ++ HL L TL L N +T+ DL T
Sbjct: 271 SIPEKAFVGNPSLITIHFYDNPIQFVGRSAFQHLPELRTLTL--NGASQITEFPDL-TGT 327
Query: 361 KSLQELRLDDNDISMEPECIYVGF-NTMDLELIYS 394
+L+ L L IS P+ + N L+L Y+
Sbjct: 328 ANLESLTLTGAQISSLPQTVCNQLPNLQVLDLSYN 362
Score = 181 (68.8 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 71/255 (27%), Positives = 117/255 (45%)
Query: 118 VTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSH 177
V LH + + + ++ F GL S L+ L L N L PT A+ L+ NL L
Sbjct: 213 VVLH---LHNNRIHSLGKKCFDGLHS-LETLDLNYNNLDEFPT-AIRTLS-NLKELGFHS 266
Query: 178 NQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQ 237
N + + +F G SL + N + + + L LR L L G ++ L
Sbjct: 267 NNIRSIPEKAFVGNPSLITIHFYDNPIQFVGRSAFQHLPELRTLTLNGAS-QITEFPDLT 325
Query: 238 GLRSVTDLDLSHNLLAGPLGPSTV-PRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSC 296
G ++ L L+ ++ P TV +L +L+VL +++N + ++ KL +
Sbjct: 326 GTANLESLTLTGAQISSL--PQTVCNQLPNLQVLDLSYNLLEDLPSFSVC--QKLQKIDL 381
Query: 297 HHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDL 356
HN+I ++ +F+ L +L L+LA N+I + + + L +L LDLS N L +
Sbjct: 382 RHNEIYEIKVDTFQQLLSLRSLNLAWNKIAIIHPNAFSTLPSLIKLDLSSNLLSSFP--- 438
Query: 357 ITPLKSLQELRLDDN 371
IT L L L+L N
Sbjct: 439 ITGLHGLTHLKLTGN 453
Score = 167 (63.8 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 81/311 (26%), Positives = 135/311 (43%)
Query: 71 TLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGEL 130
+LR AN Y GL + L D L+ + V + L L + ++ ++
Sbjct: 142 SLRLDANHIS-YVPPSCFSGLHSLRHLWLDDNALTEIPVQAFRSLSA--LQAMTLALNKI 198
Query: 131 KNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKG 190
+I D AF LSS L L L NN + + L +L+ LDL++N L + T+ +
Sbjct: 199 HHIPDYAFGNLSS-LVVLHLHNNRIHSLGKKCFDGLH-SLETLDLNYNNLDEFP-TAIRT 255
Query: 191 LSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHN 250
LS+L L N + ++ + +L + N + +A Q L + L L+
Sbjct: 256 LSNLKELGFHSNNIRSIPEKAFVGNPSLITIHFYDNPIQFVGRSAFQHLPELRTLTLN-- 313
Query: 251 LLAGPLGPSTVPRLS---SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLED- 306
G + P L+ +L+ L++ Q SS+ + L L L +N +LED
Sbjct: 314 ---GASQITEFPDLTGTANLESLTLTGAQISSLPQTVCNQLPNLQVLDLSYN---LLEDL 367
Query: 307 HSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQEL 366
SF L +DL HN I + + L +L +L+L+ N + + + + L SL +L
Sbjct: 368 PSFSVCQKLQKIDLRHNEIYEIKVDTFQQLLSLRSLNLAWNKIAIIHPNAFSTLPSLIKL 427
Query: 367 RLDDNDISMEP 377
L N +S P
Sbjct: 428 DLSSNLLSSFP 438
Score = 142 (55.0 bits), Expect = 8.5e-05, Sum P(2) = 8.5e-05
Identities = 49/179 (27%), Positives = 87/179 (48%)
Query: 93 PDERVSLLDCTLSNVTVLPGKFLEGVT-LHGLVISSGELKNISDGAFIGLSSPLQALGLP 151
P+ R L+ S +T P L G L L ++ ++ ++ L + LQ L L
Sbjct: 305 PELRTLTLNGA-SQITEFPD--LTGTANLESLTLTGAQISSLPQTVCNQLPN-LQVLDLS 360
Query: 152 NNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDC 211
NLL +P+ ++ L ++DL HN++Y+++ +F+ L SL L+L++NK+ + +
Sbjct: 361 YNLLEDLPSFSVCQ---KLQKIDLRHNEIYEIKVDTFQQLLSLRSLNLAWNKIAIIHPNA 417
Query: 212 LAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHN-LLAGPLGPSTVPRLSSLKV 269
+ L +L L L N L+ + L GL T L L+ N L + P L +++
Sbjct: 418 FSTLPSLIKLDLSSNLLSSFPITGLHGL---THLKLTGNHALQSLISSENFPELKVIEM 473
Score = 51 (23.0 bits), Expect = 9.1e-15, Sum P(2) = 9.1e-15
Identities = 11/46 (23%), Positives = 24/46 (52%)
Query: 647 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L+ + + HN+ ++ L L SL+ N+I ++ ++FS +
Sbjct: 376 LQKIDLRHNEIYEIKVDTFQQLLSLRSLNLAWNKIAIIHPNAFSTL 421
Score = 37 (18.1 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 642 ILLSSLKVLS---IAHNQFSSVRRGALAGLDKLT 672
+ +S +K+L A N + V LAG+D T
Sbjct: 587 LYISPIKLLIGVIAAVNMLTGVSSAVLAGVDAFT 620
Score = 37 (18.1 bits), Expect = 8.5e-05, Sum P(2) = 8.5e-05
Identities = 17/49 (34%), Positives = 22/49 (44%)
Query: 251 LLAGPLGPSTVPR----LSSLKVLS---IAHNQFSSVRRGALAGLDKLT 292
L L STV R +S +K+L A N + V LAG+D T
Sbjct: 572 LTCNALVTSTVFRSPLYISPIKLLIGVIAAVNMLTGVSSAVLAGVDAFT 620
>ZFIN|ZDB-GENE-050208-523 [details] [associations]
symbol:shoc2 "soc-2 suppressor of clear homolog (C.
elegans)" species:7955 "Danio rerio" [GO:0000164 "protein
phosphatase type 1 complex" evidence=IEA;ISS] [GO:0046579 "positive
regulation of Ras protein signal transduction" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0019903 "protein
phosphatase binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027036
PROSITE:PS51450 ZFIN:ZDB-GENE-050208-523 GO:GO:0005634
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875
Pfam:PF12799 GO:GO:0046579 EMBL:CR450802 GO:GO:0019903
GO:GO:0000164 HOGENOM:HOG000116557 GeneTree:ENSGT00600000084236
CTD:8036 OMA:LPHGIGN OrthoDB:EOG408N7W PANTHER:PTHR23155:SF38
EMBL:AL772158 EMBL:BC125839 EMBL:BC155579 IPI:IPI00487368
IPI:IPI00817688 RefSeq:NP_001038251.1 UniGene:Dr.68831
ProteinModelPortal:Q1L8Y7 Ensembl:ENSDART00000059882
Ensembl:ENSDART00000125215 GeneID:555476 KEGG:dre:555476
InParanoid:Q1L8Y7 NextBio:20880997 Bgee:Q1L8Y7 Uniprot:Q1L8Y7
Length = 561
Score = 218 (81.8 bits), Expect = 9.8e-15, Sum P(2) = 9.8e-15
Identities = 82/318 (25%), Positives = 144/318 (45%)
Query: 62 DLCACDLPHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLH 121
+L C +++R +K ++ + S++ L + L L ++ G L G+
Sbjct: 72 ELNKCREENSMRLDLSKRSIHLLPSSIKELTQLTELYLYSNKLQSLPPEVG-CLSGLVT- 129
Query: 122 GLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLY 181
L +S L ++ D + L+ L L +N L +P A+ +L L L N++
Sbjct: 130 -LALSENSLTSLPDS--LDNLKKLRMLDLRHNKLREIP--AVVYRVSSLTTLYLRFNRIT 184
Query: 182 KLENTSFKGLSSLNFLDLSYNKLMTLSQDC--LAPLVTLRVLRLQGNRLTVSVVAALQGL 239
+E K LS L L + NK+ L + L L+TL V Q L + Q
Sbjct: 185 TVEK-DIKNLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQ-- 241
Query: 240 RSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 299
+T+LDL HN L P T+ L+S+ L + +N+ S++ R +LA +L L+ +N
Sbjct: 242 --ITNLDLQHNDLLDL--PETIGNLASINRLGLRYNRLSAIPR-SLAKCRELEELNLENN 296
Query: 300 QIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITP 359
I VL + +L L+ L LA N + + S + +L++ HN + + + +
Sbjct: 297 NISVLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSR 356
Query: 360 LKSLQELRLDDNDISMEP 377
K L +L + DN ++ P
Sbjct: 357 AKVLSKLNMKDNQLTSLP 374
Score = 205 (77.2 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 78/313 (24%), Positives = 143/313 (45%)
Query: 69 PHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSG 128
P+ T KS + + L +E LD + ++ +LP E L L + S
Sbjct: 54 PNPPPSTRKKSSNAEVIKELNKCR-EENSMRLDLSKRSIHLLPSSIKELTQLTELYLYSN 112
Query: 129 ELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSF 188
+L+++ +G S L L L N L+ +P S L L L LDL HN+L ++ +
Sbjct: 113 KLQSLPPE--VGCLSGLVTLALSENSLTSLPDS-LDNLK-KLRMLDLRHNKLREIPAVVY 168
Query: 189 KGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLS 248
+ +SSL L L +N++ T+ +D + L L +L ++ N++ + A + L ++ LD++
Sbjct: 169 R-VSSLTTLYLRFNRITTVEKD-IKNLSKLTMLSIRENKIK-QLPAEIGELCNLITLDVA 225
Query: 249 HNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHS 308
HN L P + + + L + HN + + L + L +N++ + S
Sbjct: 226 HNQLEHL--PKEIGNCTQITNLDLQHNDLLDLPE-TIGNLASINRLGLRYNRLSAIP-RS 281
Query: 309 FRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRL 368
L L+L +N I + L+ L NLT+L L+ N ++ + ++ L +
Sbjct: 282 LAKCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSLNM 341
Query: 369 DDNDISMEPECIY 381
+ N I+ P I+
Sbjct: 342 EHNRINKIPFGIF 354
Score = 199 (75.1 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 69/230 (30%), Positives = 118/230 (51%)
Query: 145 LQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHN--QLYKLENTS-FKGLSSLNFLDLSY 201
L+ L L NN +SV+P L+ L NL L L+ N Q Y + S F + SLN + +
Sbjct: 288 LEELNLENNNISVLPEGLLSSLV-NLTSLTLARNCFQSYPVGGPSQFSTIYSLN---MEH 343
Query: 202 NKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTV 261
N++ + + L L ++ N+LT S+ S+ +L+L+ N L P +
Sbjct: 344 NRINKIPFGIFSRAKVLSKLNMKDNQLT-SLPLDFGTWTSMVELNLATNQLTKI--PEDI 400
Query: 262 PRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 321
L SL++L++++N + G + L KL L N+++ L + L L L L
Sbjct: 401 CGLVSLEMLTLSNNLLKKLPYG-IGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVLT 458
Query: 322 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
+N++ + + HL+NLT L L N L+ L +++ T L++L++L L+DN
Sbjct: 459 NNQLTTLP-RGIGHLTNLTYLGLGENLLQHLPEEIGT-LENLEDLYLNDN 506
Score = 180 (68.4 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 83/317 (26%), Positives = 142/317 (44%)
Query: 68 LPHTLRCTANKSDLYAISESLRGLEPDERV--SLLDCTLS--NVTVLPGKFLEGVTLHGL 123
LP +++ ++LY S L+ L P+ L+ LS ++T LP L L
Sbjct: 94 LPSSIKELTQLTELYLYSNKLQSLPPEVGCLSGLVTLALSENSLTSLPDSLDNLKKLRML 153
Query: 124 VISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKL 183
+ +L+ I A + S L L L N ++ V + L+ L L + N++ +L
Sbjct: 154 DLRHNKLREIP--AVVYRVSSLTTLYLRFNRITTVEKD-IKNLS-KLTMLSIRENKIKQL 209
Query: 184 ENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVT 243
L +L LD+++N+L L ++ + + L LQ N L + + + L S+
Sbjct: 210 P-AEIGELCNLITLDVAHNQLEHLPKE-IGNCTQITNLDLQHNDL-LDLPETIGNLASIN 266
Query: 244 DLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDV 303
L L +N L+ P ++ + L+ L++ +N S + G L+ L LTSL+ N
Sbjct: 267 RLGLRYNRLSAI--PRSLAKCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNCFQS 324
Query: 304 LEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSL 363
ST+ L++ HNRI + + L+ L++ N L +L D T S+
Sbjct: 325 YPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGT-WTSM 383
Query: 364 QELRLDDNDISMEPECI 380
EL L N ++ PE I
Sbjct: 384 VELNLATNQLTKIPEDI 400
Score = 47 (21.6 bits), Expect = 9.8e-15, Sum P(2) = 9.8e-15
Identities = 18/66 (27%), Positives = 30/66 (45%)
Query: 621 QEDDINRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQ 680
+E D+ N +S L L L+ L + +NQ +++ RG + L LT L N
Sbjct: 430 RELDLEENKLES----LPNEIAYLKDLQKLVLTNNQLTTLPRG-IGHLTNLTYLGLGENL 484
Query: 681 IDVLED 686
+ L +
Sbjct: 485 LQHLPE 490
Score = 43 (20.2 bits), Expect = 7.2e-13, Sum P(2) = 7.2e-13
Identities = 10/40 (25%), Positives = 21/40 (52%)
Query: 645 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL 684
S++ L++ HN+ + + G + L+ L+ NQ+ L
Sbjct: 334 STIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSL 373
>UNIPROTKB|G3MXX5 [details] [associations]
symbol:RTN4R "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0009986 "cell surface" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005783 GO:GO:0005886
GO:GO:0009986 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101803 OMA:PLWAWLQ EMBL:DAAA02045821
Ensembl:ENSBTAT00000065527 Uniprot:G3MXX5
Length = 473
Score = 218 (81.8 bits), Expect = 9.9e-15, P = 9.9e-15
Identities = 75/237 (31%), Positives = 105/237 (44%)
Query: 136 GAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLN 195
GA + S P P L VP P A R+ L N++ + SF+ +L
Sbjct: 29 GACVCYSEPKVTTSCPQQGLQAVPADI--PAASQ--RVFLHGNRIAYVPAASFRACRNLT 84
Query: 196 FLDLSYNKLMTLSQDCLAPLVTLRVLRLQGN-RLTVSVVAALQGLRSVTDLDLSHNLLAG 254
L L N L + + L L L L N +L A +GL + L L L
Sbjct: 85 ILWLHSNALAHIDAAAFSGLALLEQLDLSDNAQLRAVDPATFRGLGRLHTLHLDRCGLR- 143
Query: 255 PLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALST 314
LGP L++L+ L + N ++ A + L LT L H N I + + +FR L +
Sbjct: 144 ELGPGLFRGLAALQYLYLQDNGLQALPDDAFSDLGNLTHLFLHGNHIPSVPERAFRGLHS 203
Query: 315 LSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
L L L NR+ V + L L TL L N L AL+ + + PL+SLQ LRL+DN
Sbjct: 204 LDRLLLHQNRVARVHPHAFRDLGRLMTLYLFANNLSALSAEALAPLRSLQYLRLNDN 260
Score = 133 (51.9 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 52/161 (32%), Positives = 73/161 (45%)
Query: 90 GLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALG 149
GL E++ L D V P F LH L + L+ + G F GL++ LQ L
Sbjct: 103 GLALLEQLDLSDNAQLRA-VDPATFRGLGRLHTLHLDRCGLRELGPGLFRGLAA-LQYLY 160
Query: 150 LPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQ 209
L +N L +P A + L NL L L N + + +F+GL SL+ L L N++ +
Sbjct: 161 LQDNGLQALPDDAFSDLG-NLTHLFLHGNHIPSVPERAFRGLHSLDRLLLHQNRVARVHP 219
Query: 210 DCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHN 250
L L L L N L+ AL LRS+ L L+ N
Sbjct: 220 HAFRDLGRLMTLYLFANNLSALSAEALAPLRSLQYLRLNDN 260
Score = 129 (50.5 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 47/157 (29%), Positives = 63/157 (40%)
Query: 218 LRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQF 277
L +L L N L AA GL + LDLS N + P+T L L L +
Sbjct: 83 LTILWLHSNALAHIDAAAFSGLALLEQLDLSDNAQLRAVDPATFRGLGRLHTLHLDRCGL 142
Query: 278 SSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLS 337
+ G GL L L N + L D +F L L+HL L N I +V + L
Sbjct: 143 RELGPGLFRGLAALQYLYLQDNGLQALPDDAFSDLGNLTHLFLHGNHIPSVPERAFRGLH 202
Query: 338 NLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 374
+L L L N + + L L L L N++S
Sbjct: 203 SLDRLLLHQNRVARVHPHAFRDLGRLMTLYLFANNLS 239
>TAIR|locus:2094613 [details] [associations]
symbol:RLP38 "receptor like protein 38" species:3702
"Arabidopsis thaliana" [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006952 "defense response" evidence=ISS] [GO:0016301 "kinase
activity" evidence=ISS] [GO:0007165 "signal transduction"
evidence=IC] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
EMBL:CP002686 GenomeReviews:BA000014_GR eggNOG:COG4886
InterPro:IPR025875 Pfam:PF12799 InterPro:IPR013210 Pfam:PF08263
EMBL:AB026655 HOGENOM:HOG000116562 IPI:IPI00522339
RefSeq:NP_188953.1 UniGene:At.65133 ProteinModelPortal:Q9LS79
SMR:Q9LS79 EnsemblPlants:AT3G23120.1 GeneID:821887
KEGG:ath:AT3G23120 TAIR:At3g23120 InParanoid:Q9LS79 OMA:YARNTSS
PhylomeDB:Q9LS79 ProtClustDB:CLSN2684197 Genevestigator:Q9LS79
Uniprot:Q9LS79
Length = 784
Score = 224 (83.9 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 80/258 (31%), Positives = 120/258 (46%)
Query: 115 LEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLD 174
L L G + SS ++N+S + LS+ N+L+ VP S + L L+ +D
Sbjct: 117 LSNCNLQGEIPSS--IENLSHLTHLDLST--------NHLVGEVPAS-IGNLN-QLEYID 164
Query: 175 LSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVA 234
L N L TSF L+ L+ LDL N T L+ L +L +L L N A
Sbjct: 165 LRGNHLRGNIPTSFANLTKLSLLDLHENNF-TGGDIVLSNLTSLAILDLSSNHFKSFFSA 223
Query: 235 ALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSS-VRRGALAGLDKLTS 293
L GL ++ + + N G L P+++ ++SSL + ++ NQF + G + +LT
Sbjct: 224 DLSGLHNLEQIFGNENSFVG-LFPASLLKISSLDKIQLSQNQFEGPIDFGNTSSSSRLTM 282
Query: 294 LSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALT 353
L HN S L L LDL+HN +S S++ L NLT+LD+S+N L
Sbjct: 283 LDISHNNFIGRVPSSLSKLVNLELLDLSHNNFRGLSPRSISKLVNLTSLDISYNKLEGQV 342
Query: 354 QDLITPLKSLQELRLDDN 371
I +LQ + L N
Sbjct: 343 PYFIWKPSNLQSVDLSHN 360
Score = 181 (68.8 bits), Expect = 5.7e-10, Sum P(2) = 5.7e-10
Identities = 77/265 (29%), Positives = 116/265 (43%)
Query: 85 SESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVT-LHGLVISSGELKNISDGAFIGLSS 143
S +L L+ + L +C L +P +E ++ L L +S+ L A IG +
Sbjct: 103 SSALFKLQHLTHLDLSNCNLQGE--IPSS-IENLSHLTHLDLSTNHLVG-EVPASIGNLN 158
Query: 144 PLQALGLP-NNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYN 202
L+ + L N+L +PTS A L L LDL N + + L+SL LDLS N
Sbjct: 159 QLEYIDLRGNHLRGNIPTS-FANLT-KLSLLDLHENN-FTGGDIVLSNLTSLAILDLSSN 215
Query: 203 KLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVP 262
+ L+ L L + N A+L + S+ + LS N GP+
Sbjct: 216 HFKSFFSADLSGLHNLEQIFGNENSFVGLFPASLLKISSLDKIQLSQNQFEGPIDFGNTS 275
Query: 263 RLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 322
S L +L I+HN F +L+ L L L HN L S L L+ LD+++
Sbjct: 276 SSSRLTMLDISHNNFIGRVPSSLSKLVNLELLDLSHNNFRGLSPRSISKLVNLTSLDISY 335
Query: 323 NRIVAVSGASLAHLSNLTTLDLSHN 347
N++ + SNL ++DLSHN
Sbjct: 336 NKLEGQVPYFIWKPSNLQSVDLSHN 360
Score = 136 (52.9 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 49/179 (27%), Positives = 78/179 (43%)
Query: 193 SLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLL 252
SL LS S L L L L L L + ++++ L +T LDLS N L
Sbjct: 87 SLKLYFLSTASTSLKSSSALFKLQHLTHLDLSNCNLQGEIPSSIENLSHLTHLDLSTNHL 146
Query: 253 AGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRAL 312
G + P+++ L+ L+ + + N + A L KL+ L H N D L
Sbjct: 147 VGEV-PASIGNLNQLEYIDLRGNHLRGNIPTSFANLTKLSLLDLHENNFTG-GDIVLSNL 204
Query: 313 STLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
++L+ LDL+ N + A L+ L NL + + N L + + SL +++L N
Sbjct: 205 TSLAILDLSSNHFKSFFSADLSGLHNLEQIFGNENSFVGLFPASLLKISSLDKIQLSQN 263
Score = 130 (50.8 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 43/160 (26%), Positives = 80/160 (50%)
Query: 212 LAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLS 271
L +++L++ L ++ +AL L+ +T LDLS+ L G + PS++ LS L L
Sbjct: 82 LGEVISLKLYFLSTASTSLKSSSALFKLQHLTHLDLSNCNLQGEI-PSSIENLSHLTHLD 140
Query: 272 IAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGA 331
++ N ++ L++L + N + SF L+ LS LDL N
Sbjct: 141 LSTNHLVGEVPASIGNLNQLEYIDLRGNHLRGNIPTSFANLTKLSLLDLHENNFTG-GDI 199
Query: 332 SLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
L++L++L LDLS N ++ ++ L +L+++ ++N
Sbjct: 200 VLSNLTSLAILDLSSNHFKSFFSADLSGLHNLEQIFGNEN 239
Score = 69 (29.3 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 17/59 (28%), Positives = 34/59 (57%)
Query: 624 DINRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID 682
DI+ NN R + ++ L +L++L ++HN F + +++ L LTSL +N+++
Sbjct: 284 DISHNNFIGR---VPSSLSKLVNLELLDLSHNNFRGLSPRSISKLVNLTSLDISYNKLE 339
Score = 58 (25.5 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 16/49 (32%), Positives = 22/49 (44%)
Query: 645 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNVI 693
S L +L I+HN F +L+ L L L HN L S S ++
Sbjct: 278 SRLTMLDISHNNFIGRVPSSLSKLVNLELLDLSHNNFRGLSPRSISKLV 326
Score = 56 (24.8 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 15/52 (28%), Positives = 28/52 (53%)
Query: 630 SDSRYVKLQATTIL-LSSLKVLSIAHNQFSS-VRRGALAGLDKLTSLSCHHN 679
+++ +V L ++L +SSL + ++ NQF + G + +LT L HN
Sbjct: 237 NENSFVGLFPASLLKISSLDKIQLSQNQFEGPIDFGNTSSSSRLTMLDISHN 288
Score = 45 (20.9 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 9/38 (23%), Positives = 21/38 (55%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
+++L+ L ++ N S +L L L++++ HN +
Sbjct: 656 ITNLETLDLSRNNLSGEIPRSLGNLSFLSNINFSHNHL 693
Score = 44 (20.5 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 14/50 (28%), Positives = 23/50 (46%)
Query: 643 LLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
LLS L L+++ N F+ +LA + L +L N + S N+
Sbjct: 631 LLSELLHLNLSGNAFTGNIPPSLANITNLETLDLSRNNLSGEIPRSLGNL 680
>UNIPROTKB|F1MXH5 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050770 "regulation of axonogenesis" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026878
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:57689 KO:K07523 OMA:WITPNGS
PANTHER:PTHR24369:SF8 EMBL:DAAA02041416 IPI:IPI00693604
RefSeq:XP_002693573.1 RefSeq:XP_003583216.1 RefSeq:XP_003583217.1
RefSeq:XP_003583218.1 RefSeq:XP_003587053.1 RefSeq:XP_003587054.1
RefSeq:XP_003587055.1 RefSeq:XP_883783.1 PRIDE:F1MXH5
Ensembl:ENSBTAT00000009633 GeneID:528664 KEGG:bta:528664
NextBio:20874880 Uniprot:F1MXH5
Length = 640
Score = 220 (82.5 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 68/259 (26%), Positives = 120/259 (46%)
Query: 131 KNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKG 190
KN+ D G+S+ + L L N + ++ ++ L +L+ L LS N + +E +F G
Sbjct: 65 KNLRDVPD-GISTNTRLLNLHENQIQIIKVNSFKHLR-HLEILQLSRNHIRTIEIGAFNG 122
Query: 191 LSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHN 250
L++LN L+L N+L T+ L L+ L L+ N + A + S+ LDL
Sbjct: 123 LANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGEL 182
Query: 251 LLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFR 310
+ LS+L+ L++A + L L KL L N + + SF+
Sbjct: 183 KRLSYISEGAFEGLSNLRYLNLAMCNLREIPN--LTPLIKLDELDLSGNHLSAIRPGSFQ 240
Query: 311 ALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDD 370
L L L + ++I + + +L +L ++L+HN L L DL TPL L+ + L
Sbjct: 241 GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHH 300
Query: 371 NDISMEPECIYVGFNTMDL 389
N + + +++ + D+
Sbjct: 301 NPWNCNCDILWLSWWIKDM 319
Score = 183 (69.5 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 59/205 (28%), Positives = 100/205 (48%)
Query: 97 VSLLDCTLSNV-TVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLL 155
+ +L + +++ T+ G F L+ L + L I +GAF+ LS L+ L L NN +
Sbjct: 102 LEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSK-LKELWLRNNPI 160
Query: 156 SVVPTSALAPLAPNLDRLDLSH-NQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAP 214
+P+ A + P+L RLDL +L + +F+GLS+L +L+L+ L + L P
Sbjct: 161 ESIPSYAFNRI-PSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPN--LTP 217
Query: 215 LVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAH 274
L+ L L L GN L+ + QGL + L + + + + + L SL +++AH
Sbjct: 218 LIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQ-VIERNAFDNLQSLVEINLAH 276
Query: 275 NQFSSVRRGALAGLDKLTSLSCHHN 299
N + + L L + HHN
Sbjct: 277 NNLTLLPHDLFTPLHHLERIHLHHN 301
Score = 177 (67.4 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 61/234 (26%), Positives = 106/234 (45%)
Query: 166 LAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQG 225
++ N L+L NQ+ ++ SFK L L L LS N + T+ L L L L
Sbjct: 74 ISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFD 133
Query: 226 NRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPS-TVPRLSSLKVLSIAH-NQFSSVRRG 283
NRLT A L + +L L +N + PS R+ SL+ L + + S + G
Sbjct: 134 NRLTTIPNGAFVYLSKLKELWLRNNPIESI--PSYAFNRIPSLRRLDLGELKRLSYISEG 191
Query: 284 ALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLD 343
A GL L L+ ++ E + L L LDL+ N + A+ S L +L L
Sbjct: 192 AFEGLSNLRYLNLA--MCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLW 249
Query: 344 LSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELIYSGVW 397
+ + ++ + ++ L+SL E+ L N++++ P ++ + ++ ++ W
Sbjct: 250 MIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPW 303
Score = 117 (46.2 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 43/134 (32%), Positives = 62/134 (46%)
Query: 251 LLAGPLGPSTVPRLSSLKVLSIAHNQFSSV---R---RGALAGLDKLTSL-SCHHNQIDV 303
++AG + T P + S NQFS V R R G+ T L + H NQI +
Sbjct: 37 VVAGLVRAQTCPSVCSCS------NQFSKVICVRKNLRDVPDGISTNTRLLNLHENQIQI 90
Query: 304 LEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSL 363
++ +SF+ L L L L+ N I + + L+NL TL+L N L + L L
Sbjct: 91 IKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKL 150
Query: 364 QELRLDDNDISMEP 377
+EL L +N I P
Sbjct: 151 KELWLRNNPIESIP 164
Score = 71 (30.1 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L L ++ N S++R G+ GL L L +QI V+E ++F N+
Sbjct: 218 LIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNL 266
Score = 51 (23.0 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 679
L SL +++AHN + + L L + HHN
Sbjct: 266 LQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHN 301
Score = 50 (22.7 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 12/47 (25%), Positives = 21/47 (44%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFS 690
L L+ L + +Q + R A L L ++ HN + +L F+
Sbjct: 242 LMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFT 288
>ZFIN|ZDB-GENE-061026-3 [details] [associations]
symbol:nyx "nyctalopin" species:7955 "Danio rerio"
[GO:0007634 "optokinetic behavior" evidence=IMP] [GO:0007601
"visual perception" evidence=IMP] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 ZFIN:ZDB-GENE-061026-3 GO:GO:0007601 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 SMART:SM00013 GO:GO:0007634 CTD:60506
HOGENOM:HOG000230477 HOVERGEN:HBG031762 KO:K08129 OMA:NISFITP
OrthoDB:EOG43JC4W GeneTree:ENSGT00690000101803 EMBL:BX545856
EMBL:BC163107 EMBL:BC163110 EMBL:DQ201193 IPI:IPI00508128
RefSeq:NP_001071085.1 UniGene:Dr.82636 Ensembl:ENSDART00000088569
GeneID:568821 KEGG:dre:568821 InParanoid:Q00P20 NextBio:20889357
Uniprot:Q00P20
Length = 469
Score = 217 (81.4 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 81/290 (27%), Positives = 135/290 (46%)
Query: 94 DERVSLLDCTLSNVTVLPGKF-LEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPN 152
++ S+L C N+ LP +F E +++ + LK +S+ AF L S L+ L L
Sbjct: 37 EKSCSVL-CDHVNMMDLPKEFPCEASSIN---LDKNSLKFLSERAFGTLPS-LKTLSLKY 91
Query: 153 NLLSVVPTSALAPLAPNLDRLDLSHNQLYK-LENTSFKGLSSLNFLDLSYNKLMTLSQDC 211
N +S + A L PNL L ++HN+ + L +F L L LDLS L +
Sbjct: 92 NNISFITPGAFKGL-PNLVELKMAHNEYIRYLHTRTFTALKRLVRLDLSDCNLFNMPDRI 150
Query: 212 LAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLS 271
+TL+ L N V AL+G+ ++T + L N + + +++ L+SLK L+
Sbjct: 151 FLEQITLKELLCFQNNFR-RVPGALRGMENLTHVYLERNKIEA-VAYNSLLGLTSLKYLN 208
Query: 272 IAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGA 331
+ N+ + + A L +L + + N + L +F+ LS L L+L N + VS
Sbjct: 209 LQENRINVIHDEAFKDLIRLENFYLNDNLLVDLPQQAFKGLSNLKMLNLGGNLLTNVSKT 268
Query: 332 SLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIY 381
+ L L L L N L + L SL L L+ N+++ P ++
Sbjct: 269 WFSDLVELEVLYLDRNRLSYIEDGSFENLTSLITLHLNSNNLTSLPFSVF 318
Score = 155 (59.6 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 51/194 (26%), Positives = 90/194 (46%)
Query: 197 LDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPL 256
++L N L LS+ L +L+ L L+ N ++ A +GL ++ +L ++HN L
Sbjct: 63 INLDKNSLKFLSERAFGTLPSLKTLSLKYNNISFITPGAFKGLPNLVELKMAHNEYIRYL 122
Query: 257 GPSTVPRLSSLKVLSIAH-NQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTL 315
T L L L ++ N F+ R L + L L C N + + R + L
Sbjct: 123 HTRTFTALKRLVRLDLSDCNLFNMPDRIFLEQIT-LKELLCFQNNFRRVPG-ALRGMENL 180
Query: 316 SHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISM 375
+H+ L N+I AV+ SL L++L L+L N + + + L L+ L+DN +
Sbjct: 181 THVYLERNKIEAVAYNSLLGLTSLKYLNLQENRINVIHDEAFKDLIRLENFYLNDNLLVD 240
Query: 376 EPECIYVGFNTMDL 389
P+ + G + + +
Sbjct: 241 LPQQAFKGLSNLKM 254
Score = 144 (55.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 81/317 (25%), Positives = 127/317 (40%)
Query: 64 CACDLPHTLRCTANKSDLYAISESLRGLE-PDERVSLLDCTLSNVTVLPG--KFL-EGV- 118
C P T CT KS + + + ++ P E C S++ + KFL E
Sbjct: 24 CTRSCPPTCTCTQEKS-CSVLCDHVNMMDLPKE----FPCEASSINLDKNSLKFLSERAF 78
Query: 119 -TLHGLVISSGELKNIS---DGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLD 174
TL L S + NIS GAF GL + ++ N + + T L L RLD
Sbjct: 79 GTLPSLKTLSLKYNNISFITPGAFKGLPNLVELKMAHNEYIRYLHTRTFTALK-RLVRLD 137
Query: 175 LSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVA 234
LS L+ + + F +L L L + L + L + L+ N++
Sbjct: 138 LSDCNLFNMPDRIFLEQITLKEL-LCFQNNFRRVPGALRGMENLTHVYLERNKIEAVAYN 196
Query: 235 ALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSL 294
+L GL S+ L+L N + + L L+ + N + + A GL L L
Sbjct: 197 SLLGLTSLKYLNLQENRI-NVIHDEAFKDLIRLENFYLNDNLLVDLPQQAFKGLSNLKML 255
Query: 295 SCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQ 354
+ N + + F L L L L NR+ + S +L++L TL L+ N L +L
Sbjct: 256 NLGGNLLTNVSKTWFSDLVELEVLYLDRNRLSYIEDGSFENLTSLITLHLNSNNLTSLPF 315
Query: 355 DLITPLKSLQELRLDDN 371
+ P+ + L L N
Sbjct: 316 SVFQPIYFIGRLYLFRN 332
Score = 69 (29.3 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
LS+LK+L++ N ++V + + L +L L N++ +ED SF N+
Sbjct: 249 LSNLKMLNLGGNLLTNVSKTWFSDLVELEVLYLDRNRLSYIEDGSFENL 297
>UNIPROTKB|Q5F4C4 [details] [associations]
symbol:SHOC2 "Leucine-rich repeat protein SHOC-2"
species:9031 "Gallus gallus" [GO:0046579 "positive regulation of
Ras protein signal transduction" evidence=ISS] [GO:0019903 "protein
phosphatase binding" evidence=ISS] [GO:0000164 "protein phosphatase
type 1 complex" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] InterPro:IPR001611
InterPro:IPR027036 PROSITE:PS51450 GO:GO:0005634 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
GO:GO:0046579 GO:GO:0019903 GO:GO:0000164 HSSP:P07359
HOGENOM:HOG000116557 CTD:8036 PANTHER:PTHR23155:SF38 EMBL:AJ851376
IPI:IPI00600917 RefSeq:NP_001026407.1 UniGene:Gga.42449
ProteinModelPortal:Q5F4C4 GeneID:423894 KEGG:gga:423894
NextBio:20826295 Uniprot:Q5F4C4
Length = 529
Score = 216 (81.1 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 89/330 (26%), Positives = 153/330 (46%)
Query: 69 PHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSG 128
P+ T KS + + L +E LD ++ +LP E L L + S
Sbjct: 75 PNPATGTRKKSSNAEVIKELNKCR-EENSMRLDLAKRSIHMLPSAVKELTQLTELYLYSN 133
Query: 129 ELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSF 188
+L+++ A +G L L L N L+ +P S L L L LDL HN+L ++ + +
Sbjct: 134 KLQSLP--AEVGCLVNLVTLALSENSLTSLPDS-LDNLK-KLRMLDLRHNKLREIPSVVY 189
Query: 189 KGLSSLNFLDLSYNKLMTLSQDC--LAPLVTL-----RVLRLQG------NRLTVSVVA- 234
+ L+SL L L +N++ T+ +D L+ L L ++ +L N +T+ V
Sbjct: 190 R-LTSLATLYLRFNRITTVEKDIKTLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHN 248
Query: 235 ALQGL-------RSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAG 287
L+ L +T+LDL HN L P T+ LSSL L + +N+ S++ + +LA
Sbjct: 249 QLEHLPEEIGSCTQITNLDLQHNELLDL--PETIGNLSSLSRLGLRYNRLSAIPK-SLAK 305
Query: 288 LDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHN 347
+L L+ +N I L + +L L+ L LA N + + S + +L++ HN
Sbjct: 306 CSELDELNLENNNISTLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHN 365
Query: 348 FLRALTQDLITPLKSLQELRLDDNDISMEP 377
+ + + + K L +L + DN ++ P
Sbjct: 366 RINKIPFGIFSRAKVLSKLNMKDNQLTSLP 395
Score = 190 (71.9 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 86/316 (27%), Positives = 146/316 (46%)
Query: 68 LPHTLRCTANKSDLYAISESLRGLEPDE---RVSLLDCTLS--NVTVLPGKFLEGVTLHG 122
LP ++ ++LY S L+ L P E V+L+ LS ++T LP L
Sbjct: 115 LPSAVKELTQLTELYLYSNKLQSL-PAEVGCLVNLVTLALSENSLTSLPDSLDNLKKLRM 173
Query: 123 LVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYK 182
L + +L+ I + L+S L L L N ++ V + L+ L L + N++ +
Sbjct: 174 LDLRHNKLREIPSVVY-RLTS-LATLYLRFNRITTVEKD-IKTLS-KLTMLSIRENKIKQ 229
Query: 183 LENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSV 242
L L +L LD+++N+L L ++ + + L LQ N L + + + L S+
Sbjct: 230 LP-AEIGELCNLITLDVAHNQLEHLPEE-IGSCTQITNLDLQHNEL-LDLPETIGNLSSL 286
Query: 243 TDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID 302
+ L L +N L+ P ++ + S L L++ +N S++ G L+ L KLTSL+ N
Sbjct: 287 SRLGLRYNRLSAI--PKSLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLARNCFQ 344
Query: 303 VLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKS 362
ST+ L++ HNRI + + L+ L++ N L +L D T S
Sbjct: 345 SYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGT-WTS 403
Query: 363 LQELRLDDNDISMEPE 378
+ EL L N ++ PE
Sbjct: 404 MVELNLATNQLTKIPE 419
Score = 168 (64.2 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 63/217 (29%), Positives = 102/217 (47%)
Query: 143 SPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHN--QLYKLENTS-FKGLSSLNFLDL 199
S L L L NN +S +P L+ L L L L+ N Q Y + S F + SLN +
Sbjct: 307 SELDELNLENNNISTLPEGLLSSLV-KLTSLTLARNCFQSYPVGGPSQFSTIYSLN---M 362
Query: 200 SYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPS 259
+N++ + + L L ++ N+LT S+ S+ +L+L+ N L P
Sbjct: 363 EHNRINKIPFGIFSRAKVLSKLNMKDNQLT-SLPLDFGTWTSMVELNLATNQLTKI--PE 419
Query: 260 TVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 319
V L SL+VL +++N + G + L KL L N+++ L + L L L
Sbjct: 420 DVSGLVSLEVLILSNNLLKKLPHG-IGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLV 477
Query: 320 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDL 356
L +N++ + + HL+NLT L L N L L +++
Sbjct: 478 LTNNQLTTLP-RGIGHLTNLTHLGLGENLLTHLPEEI 513
Score = 47 (21.6 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 18/66 (27%), Positives = 30/66 (45%)
Query: 621 QEDDINRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQ 680
+E D+ N +S L L L+ L + +NQ +++ RG + L LT L N
Sbjct: 451 RELDLEENKLES----LPNEIAYLKDLQKLVLTNNQLTTLPRG-IGHLTNLTHLGLGENL 505
Query: 681 IDVLED 686
+ L +
Sbjct: 506 LTHLPE 511
>UNIPROTKB|F1NRN7 [details] [associations]
symbol:SHOC2 "Leucine-rich repeat protein SHOC-2"
species:9031 "Gallus gallus" [GO:0000164 "protein phosphatase type
1 complex" evidence=IEA] [GO:0046579 "positive regulation of Ras
protein signal transduction" evidence=IEA] InterPro:IPR001611
InterPro:IPR027036 PROSITE:PS51450 InterPro:IPR003591 SMART:SM00369
InterPro:IPR025875 Pfam:PF12799 GeneTree:ENSGT00600000084236
PANTHER:PTHR23155:SF38 IPI:IPI00600917 EMBL:AADN02030891
Ensembl:ENSGALT00000014266 Uniprot:F1NRN7
Length = 529
Score = 216 (81.1 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 89/330 (26%), Positives = 153/330 (46%)
Query: 69 PHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSG 128
P+ T KS + + L +E LD ++ +LP E L L + S
Sbjct: 75 PNPATGTRKKSSNAEVIKELNKCR-EENSMRLDLAKRSIHMLPSAVKELTQLTELYLYSN 133
Query: 129 ELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSF 188
+L+++ A +G L L L N L+ +P S L L L LDL HN+L ++ + +
Sbjct: 134 KLQSLP--AEVGCLVNLVTLALSENSLTSLPDS-LDNLK-KLRMLDLRHNKLREIPSVVY 189
Query: 189 KGLSSLNFLDLSYNKLMTLSQDC--LAPLVTL-----RVLRLQG------NRLTVSVVA- 234
+ L+SL L L +N++ T+ +D L+ L L ++ +L N +T+ V
Sbjct: 190 R-LTSLATLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHN 248
Query: 235 ALQGL-------RSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAG 287
L+ L +T+LDL HN L P T+ LSSL L + +N+ S++ + +LA
Sbjct: 249 QLEHLPEEIGSCTQITNLDLQHNELLDL--PETIGNLSSLSRLGLRYNRLSAIPK-SLAK 305
Query: 288 LDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHN 347
+L L+ +N I L + +L L+ L LA N + + S + +L++ HN
Sbjct: 306 CSELDELNLENNNISTLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHN 365
Query: 348 FLRALTQDLITPLKSLQELRLDDNDISMEP 377
+ + + + K L +L + DN ++ P
Sbjct: 366 RINKIPFGIFSRAKVLSKLNMKDNQLTSLP 395
Score = 189 (71.6 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 86/316 (27%), Positives = 146/316 (46%)
Query: 68 LPHTLRCTANKSDLYAISESLRGLEPDE---RVSLLDCTLS--NVTVLPGKFLEGVTLHG 122
LP ++ ++LY S L+ L P E V+L+ LS ++T LP L
Sbjct: 115 LPSAVKELTQLTELYLYSNKLQSL-PAEVGCLVNLVTLALSENSLTSLPDSLDNLKKLRM 173
Query: 123 LVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYK 182
L + +L+ I + L+S L L L N ++ V + L+ L L + N++ +
Sbjct: 174 LDLRHNKLREIPSVVY-RLTS-LATLYLRFNRITTVEKD-IKNLS-KLTMLSIRENKIKQ 229
Query: 183 LENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSV 242
L L +L LD+++N+L L ++ + + L LQ N L + + + L S+
Sbjct: 230 LP-AEIGELCNLITLDVAHNQLEHLPEE-IGSCTQITNLDLQHNEL-LDLPETIGNLSSL 286
Query: 243 TDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID 302
+ L L +N L+ P ++ + S L L++ +N S++ G L+ L KLTSL+ N
Sbjct: 287 SRLGLRYNRLSAI--PKSLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLARNCFQ 344
Query: 303 VLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKS 362
ST+ L++ HNRI + + L+ L++ N L +L D T S
Sbjct: 345 SYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGT-WTS 403
Query: 363 LQELRLDDNDISMEPE 378
+ EL L N ++ PE
Sbjct: 404 MVELNLATNQLTKIPE 419
Score = 168 (64.2 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 63/217 (29%), Positives = 102/217 (47%)
Query: 143 SPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHN--QLYKLENTS-FKGLSSLNFLDL 199
S L L L NN +S +P L+ L L L L+ N Q Y + S F + SLN +
Sbjct: 307 SELDELNLENNNISTLPEGLLSSLV-KLTSLTLARNCFQSYPVGGPSQFSTIYSLN---M 362
Query: 200 SYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPS 259
+N++ + + L L ++ N+LT S+ S+ +L+L+ N L P
Sbjct: 363 EHNRINKIPFGIFSRAKVLSKLNMKDNQLT-SLPLDFGTWTSMVELNLATNQLTKI--PE 419
Query: 260 TVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 319
V L SL+VL +++N + G + L KL L N+++ L + L L L
Sbjct: 420 DVSGLVSLEVLILSNNLLKKLPHG-IGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLV 477
Query: 320 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDL 356
L +N++ + + HL+NLT L L N L L +++
Sbjct: 478 LTNNQLTTLP-RGIGHLTNLTHLGLGENLLTHLPEEI 513
Score = 47 (21.6 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 18/66 (27%), Positives = 30/66 (45%)
Query: 621 QEDDINRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQ 680
+E D+ N +S L L L+ L + +NQ +++ RG + L LT L N
Sbjct: 451 RELDLEENKLES----LPNEIAYLKDLQKLVLTNNQLTTLPRG-IGHLTNLTHLGLGENL 505
Query: 681 IDVLED 686
+ L +
Sbjct: 506 LTHLPE 511
>UNIPROTKB|F1S8Z0 [details] [associations]
symbol:SLIT1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050919 "negative chemotaxis" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0048495 "Roundabout binding" evidence=IEA] [GO:0040023
"establishment of nucleus localization" evidence=IEA] [GO:0033563
"dorsal/ventral axon guidance" evidence=IEA] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=IEA] [GO:0022028 "tangential
migration from the subventricular zone to the olfactory bulb"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 GO:GO:0005737 GO:GO:0005615 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045
PROSITE:PS01186 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 InterPro:IPR025875
Pfam:PF12799 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
Pfam:PF12661 GO:GO:0033563 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
OMA:KCVHGKC EMBL:FP340446 ProteinModelPortal:F1S8Z0
Ensembl:ENSSSCT00000011502 Uniprot:F1S8Z0
Length = 1397
Score = 159 (61.0 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 44/137 (32%), Positives = 71/137 (51%)
Query: 141 LSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLS 200
L + + L N + +P A +P L R+DLS+NQ+ ++ +F+GL SLN L L
Sbjct: 171 LPETMTEIRLELNGIKSIPPGAFSPYR-KLRRIDLSNNQISEIAPDAFQGLRSLNSLVLY 229
Query: 201 YNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPST 260
NK+ L + L TL++L L N++ A Q L++++ L L N + G L T
Sbjct: 230 GNKITDLPRGVFGGLFTLQLLLLNANKINCVRPDAFQDLQNLSLLSLYDNKIQG-LAKGT 288
Query: 261 VPRLSSLKVLSIAHNQF 277
L +++ L +A N F
Sbjct: 289 FTSLRAIQTLHLAQNPF 305
Score = 148 (57.2 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 38/131 (29%), Positives = 73/131 (55%)
Query: 148 LGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTL 207
L L NN +S++ + + +L +++LS+N++ ++E+ +F+G +S++ L L+ N+L ++
Sbjct: 408 LRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESI 467
Query: 208 SQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSL 267
L LR L L+ NR++ + GLR+V L L N +A + P L +L
Sbjct: 468 RSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIA-TISPGAFDTLQAL 526
Query: 268 KVLSIAHNQFS 278
L++ N F+
Sbjct: 527 STLNLLANPFN 537
Score = 146 (56.5 bits), Expect = 9.5e-08, Sum P(2) = 9.5e-08
Identities = 67/257 (26%), Positives = 105/257 (40%)
Query: 150 LPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQ 209
L N + +P A A +L L L NQ+ +E +F+ L L L L+ N + T+
Sbjct: 4 LSENTIQAIPRKAFRG-ATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNISTIPV 62
Query: 210 DCLAPLVTLRVLRLQGNRLTVSV-VAAL-QGLRSVTDLDLSHNLLAGPLGPSTVPRLSSL 267
+ LR RL N L +A L Q LR + L +GP L L
Sbjct: 63 SSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGL-FTQCSGPAS------LRGL 115
Query: 268 KVLSIAHNQFSSVRRGALAGLDK--LTSLSCH-----HNQIDVLEDHSFRAL-----STL 315
V + ++FS +G + L+S SC N I A+ T+
Sbjct: 116 NVAEVQKSEFSCSGQGEAGRVPSCTLSSGSCPAMCACSNGIVDCRGKGLTAIPANLPETM 175
Query: 316 SHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISM 375
+ + L N I ++ + + L +DLS+N + + D L+SL L L N I+
Sbjct: 176 TEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYGNKITD 235
Query: 376 EPECIYVGFNTMDLELI 392
P ++ G T+ L L+
Sbjct: 236 LPRGVFGGLFTLQLLLL 252
Score = 130 (50.8 bits), Expect = 1.3e-14, Sum P(3) = 1.3e-14
Identities = 35/144 (24%), Positives = 68/144 (47%)
Query: 240 RSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 299
++ +L L++N ++ +L+ LK +++++N+ S + GA G ++ L N
Sbjct: 403 QATAELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTAN 462
Query: 300 QIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITP 359
Q++ + FR L L L L +NRI + S L N+ L L N + ++
Sbjct: 463 QLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDT 522
Query: 360 LKSLQELRLDDNDISMEPECIYVG 383
L++L L L N + + ++G
Sbjct: 523 LQALSTLNLLANPFNCNCQLAWLG 546
Score = 130 (50.8 bits), Expect = 1.3e-14, Sum P(3) = 1.3e-14
Identities = 43/152 (28%), Positives = 70/152 (46%)
Query: 99 LLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVV 158
++DC +T +P E +T L ++ +K+I GAF L+ + L NN +S +
Sbjct: 156 IVDCRGKGLTAIPANLPETMTEIRLELNG--IKSIPPGAFSPYRK-LRRIDLSNNQISEI 212
Query: 159 PTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTL 218
A L +L+ L L N++ L F GL +L L L+ NK+ + D L L
Sbjct: 213 APDAFQGLR-SLNSLVLYGNKITDLPRGVFGGLFTLQLLLLNANKINCVRPDAFQDLQNL 271
Query: 219 RVLRLQGNRLTVSVVAALQGLRSVTDLDLSHN 250
+L L N++ LR++ L L+ N
Sbjct: 272 SLLSLYDNKIQGLAKGTFTSLRAIQTLHLAQN 303
Score = 130 (50.8 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 44/152 (28%), Positives = 72/152 (47%)
Query: 220 VLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSS 279
++ +G LT ++ A L ++T++ L N + + P L+ + +++NQ S
Sbjct: 156 IVDCRGKGLT-AIPANLP--ETMTEIRLELNGIKS-IPPGAFSPYRKLRRIDLSNNQISE 211
Query: 280 VRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNL 339
+ A GL L SL + N+I L F L TL L L N+I V + L NL
Sbjct: 212 IAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLFTLQLLLLNANKINCVRPDAFQDLQNL 271
Query: 340 TTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
+ L L N ++ L + T L+++Q L L N
Sbjct: 272 SLLSLYDNKIQGLAKGTFTSLRAIQTLHLAQN 303
Score = 128 (50.1 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 50/174 (28%), Positives = 81/174 (46%)
Query: 61 NDLCACDL--PHTLRCTANKSDLYAISESLRGLEPDERV--SLLDCTLSN--VTVLP--G 112
N C D+ PH RC A+ + SL+ + ER+ + + L+N +++L G
Sbjct: 367 NSECNSDVVCPHKCRCEASVVEC----SSLKLSKIPERIPQATAELRLNNNEISILEATG 422
Query: 113 KFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDR 172
F + L + +S+ ++ I DGAF G +S + L L N L + + L L
Sbjct: 423 MFKKLTHLKKINLSNNKVSEIEDGAFEGAAS-VSELHLTANQLESIRSGMFRGL-DGLRT 480
Query: 173 LDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGN 226
L L +N++ + N SF GL ++ L L N++ T+S L L L L N
Sbjct: 481 LMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALSTLNLLAN 534
Score = 121 (47.7 bits), Expect = 1.7e-09, Sum P(3) = 1.7e-09
Identities = 40/147 (27%), Positives = 65/147 (44%)
Query: 199 LSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGP 258
L N + ++ +P LR + L N+++ A QGLRS+ L L N + L
Sbjct: 180 LELNGIKSIPPGAFSPYRKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYGNKITD-LPR 238
Query: 259 STVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHL 318
L +L++L + N+ + VR A L L+ LS + N+I L +F +L + L
Sbjct: 239 GVFGGLFTLQLLLLNANKINCVRPDAFQDLQNLSLLSLYDNKIQGLAKGTFTSLRAIQTL 298
Query: 319 DLAHNRIVAVSGASLAHLSNLTTLDLS 345
LA N + LA ++ S
Sbjct: 299 HLAQNPFICDCNLWLADFLRTNPIETS 325
Score = 116 (45.9 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 34/102 (33%), Positives = 54/102 (52%)
Query: 287 GLDK-LTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLS 345
G+ K +T L NQ +L L +DL++N+I ++S +S ++S LTTL LS
Sbjct: 621 GIPKNVTELYLDGNQF-MLVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILS 679
Query: 346 HNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTM 387
+N L+ + L+SL+ L L NDIS E I+ ++
Sbjct: 680 YNALQCIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSL 721
Score = 112 (44.5 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 32/103 (31%), Positives = 52/103 (50%)
Query: 221 LRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSV 280
L L GN+ + V L + + +DLS+N ++ L S+ +S L L +++N +
Sbjct: 629 LYLDGNQFML-VPGQLSTFKYLQLVDLSNNKISS-LSNSSFTNMSQLTTLILSYNALQCI 686
Query: 281 RRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 323
A GL L LS H N I L++ F +++LSHL + N
Sbjct: 687 PPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAIGAN 729
Score = 100 (40.3 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 34/140 (24%), Positives = 61/140 (43%)
Query: 160 TSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLR 219
T+ A L + + L N + + +F L +DLS N++ ++ D L +L
Sbjct: 165 TAIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQISEIAPDAFQGLRSLN 224
Query: 220 VLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSS 279
L L GN++T GL ++ L L+ N + + P L +L +LS+ N+
Sbjct: 225 SLVLYGNKITDLPRGVFGGLFTLQLLLLNANKI-NCVRPDAFQDLQNLSLLSLYDNKIQG 283
Query: 280 VRRGALAGLDKLTSLSCHHN 299
+ +G L + +L N
Sbjct: 284 LAKGTFTSLRAIQTLHLAQN 303
Score = 98 (39.6 bits), Expect = 4.5e-07, Sum P(3) = 4.5e-07
Identities = 31/116 (26%), Positives = 53/116 (45%)
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 317
P+ +P ++ + + N S+ GA + KL + +NQI + +F+ L +L+
Sbjct: 168 PANLPE--TMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQISEIAPDAFQGLRSLNS 225
Query: 318 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 373
L L N+I + L L L L+ N + + D L++L L L DN I
Sbjct: 226 LVLYGNKITDLPRGVFGGLFTLQLLLLNANKINCVRPDAFQDLQNLSLLSLYDNKI 281
Score = 96 (38.9 bits), Expect = 3.8e-11, Sum P(3) = 3.8e-11
Identities = 42/164 (25%), Positives = 75/164 (45%)
Query: 67 DLPHTLRCTANKSDLYAISESLRG-LEPDERVSLLDCTLSNVT-VLPGKFLEGV-TLHGL 123
+LP T+ T + +L I G P ++ +D + + ++ + P F +G+ +L+ L
Sbjct: 170 NLPETM--TEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQISEIAPDAF-QGLRSLNSL 226
Query: 124 VISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKL 183
V+ ++ ++ G F GL + LQ L L N ++ V A L NL L L N++ L
Sbjct: 227 VLYGNKITDLPRGVFGGLFT-LQLLLLNANKINCVRPDAFQDLQ-NLSLLSLYDNKIQGL 284
Query: 184 ENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNR 227
+F L ++ L L+ N + LA + + G R
Sbjct: 285 AKGTFTSLRAIQTLHLAQNPFICDCNLWLADFLRTNPIETSGAR 328
Score = 93 (37.8 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 30/116 (25%), Positives = 54/116 (46%)
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 317
P +P+ ++ L + NQF V G L+ L + +N+I L + SF +S L+
Sbjct: 619 PKGIPK--NVTELYLDGNQFMLVP-GQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTT 675
Query: 318 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 373
L L++N + + + L +L L L N + L + + + SL L + N +
Sbjct: 676 LILSYNALQCIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAIGANPL 731
Score = 90 (36.7 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 24/101 (23%), Positives = 51/101 (50%)
Query: 294 LSCHHNQIDVLEDHS-FRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRAL 352
L ++N+I +LE F+ L+ L ++L++N++ + + ++++ L L+ N L ++
Sbjct: 408 LRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESI 467
Query: 353 TQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELIY 393
+ L L+ L L +N IS + G + L +Y
Sbjct: 468 RSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLY 508
Score = 89 (36.4 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 25/82 (30%), Positives = 39/82 (47%)
Query: 101 DCTLSNVTVLPGKFLEGVT-LHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVP 159
D + + + +P K G T L L + ++ I +GAF L L+ L L NN +S +P
Sbjct: 3 DLSENTIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRG-LEVLTLNNNNISTIP 61
Query: 160 TSALAPLAPNLDRLDLSHNQLY 181
S+ + P L L N L+
Sbjct: 62 VSSFNHM-PKLRTFRLHSNHLF 82
Score = 81 (33.6 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 21/81 (25%), Positives = 36/81 (44%)
Query: 172 RLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVS 231
R DLS N + + +F+G + L L L N++ + + L L VL L N ++
Sbjct: 1 RRDLSENTIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNISTI 60
Query: 232 VVAALQGLRSVTDLDLSHNLL 252
V++ + + L N L
Sbjct: 61 PVSSFNHMPKLRTFRLHSNHL 81
Score = 78 (32.5 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 645 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
+S+ L + NQ S+R G GLD L +L +N+I + + SF+ +
Sbjct: 452 ASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGL 499
Score = 71 (30.1 bits), Expect = 6.0e-11, Sum P(3) = 6.0e-11
Identities = 24/81 (29%), Positives = 41/81 (50%)
Query: 616 IPVAQQEDDINRNNSDSRYVKLQATTIL--LSSLKVLSIAHNQFSSVRRGALAGLDKLTS 673
IP A E +N NN S L+AT + L+ LK +++++N+ S + GA G ++
Sbjct: 401 IPQATAELRLN-NNEISI---LEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSE 456
Query: 674 LSCHHNQIDVLEDHSFSNVIG 694
L NQ++ + F + G
Sbjct: 457 LHLTANQLESIRSGMFRGLDG 477
Score = 66 (28.3 bits), Expect = 1.3e-14, Sum P(3) = 1.3e-14
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
+S L L +++N + A GL L LS H N I L++ F++V
Sbjct: 670 MSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADV 718
Score = 64 (27.6 bits), Expect = 6.2e-09, Sum P(2) = 6.2e-09
Identities = 20/75 (26%), Positives = 35/75 (46%)
Query: 315 LSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 374
++ L L N+ + V G L+ L +DLS+N + +L+ T + L L L N +
Sbjct: 626 VTELYLDGNQFMLVPG-QLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQ 684
Query: 375 MEPECIYVGFNTMDL 389
P + G ++ L
Sbjct: 685 CIPPLAFQGLRSLRL 699
Score = 62 (26.9 bits), Expect = 4.8e-10, Sum P(3) = 4.8e-10
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L+ L + +N+ S + + GL + LS + NQI + +F +
Sbjct: 475 LDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTL 523
Score = 57 (25.1 bits), Expect = 8.0e-07, Sum P(2) = 8.0e-07
Identities = 15/49 (30%), Positives = 28/49 (57%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L +L++L + N+ + VR A L L+ LS + N+I L +F+++
Sbjct: 244 LFTLQLLLLNANKINCVRPDAFQDLQNLSLLSLYDNKIQGLAKGTFTSL 292
Score = 48 (22.0 bits), Expect = 8.2e-12, Sum P(3) = 8.2e-12
Identities = 10/32 (31%), Positives = 21/32 (65%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLS 675
L ++++LS+ NQ +++ GA L L++L+
Sbjct: 499 LRNVRLLSLYDNQIATISPGAFDTLQALSTLN 530
Score = 44 (20.5 bits), Expect = 2.3e-12, Sum P(3) = 2.3e-12
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 655 NQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
NQF V G L+ L + +N+I L + SF+N+
Sbjct: 634 NQFMLVP-GQLSTFKYLQLVDLSNNKISSLSNSSFTNM 670
>UNIPROTKB|P58727 [details] [associations]
symbol:TLR4 "Toll-like receptor 4" species:9685 "Felis
catus" [GO:0001875 "lipopolysaccharide receptor activity"
evidence=ISS] [GO:0032497 "detection of lipopolysaccharide"
evidence=ISS] [GO:0042116 "macrophage activation" evidence=ISS]
[GO:0046696 "lipopolysaccharide receptor complex" evidence=ISS]
Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR017241 InterPro:IPR027168 Pfam:PF01582
PIRSF:PIRSF037595 PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
GO:GO:0006954 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0045087 GO:GO:0005622 GO:GO:0042116
InterPro:IPR025875 Pfam:PF12799 GO:GO:0004888 GO:GO:0046696
SUPFAM:SSF52200 GO:GO:0001875 GO:GO:0032497 HOVERGEN:HBG018823
PANTHER:PTHR24365:SF9 CTD:7099 EMBL:AB060687 RefSeq:NP_001009223.1
ProteinModelPortal:P58727 SMR:P58727 GeneID:493698 KEGG:fca:493698
Uniprot:P58727
Length = 833
Score = 221 (82.9 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 85/292 (29%), Positives = 133/292 (45%)
Query: 67 DLPHTLRCTANKSDLYAISESLRGLE--PD----ERVSLLDCTLSNVTVLPGKFLEGVTL 120
D + C AN S + + +GL+ P +R+ L++C P L+ L
Sbjct: 299 DAIDSFNCLANVSTISLVHLYFKGLKQLPKNLGWQRLELVNCEFEQ---FPTWKLD--PL 353
Query: 121 HGLVISSGELKNISDGAF--IGLSSPLQALGLPNNLLSVVPTSALAPLAPN-LDRLDLSH 177
LV S+ E++N AF + L S L+ L L N S+ + L L LDLS
Sbjct: 354 KELVFSANEVRN----AFTQVKLES-LEFLDLSRNDFSLKSCCSERDLGTTRLKHLDLSF 408
Query: 178 NQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQ-DCLAPLVTLRVLRLQGNRLTVSVVAAL 236
N + + +++F GL L +LD ++ L +S PL LR L + V+
Sbjct: 409 NNIITI-SSNFLGLEQLEYLDFQHSSLKQVSDFSVFLPLKNLRYLDISYTHTQVAFHGIF 467
Query: 237 QGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSC 296
GL S+ L ++ N P+ L++L +L ++ Q V + A L KL L+
Sbjct: 468 NGLISLQILKMAGNSFQDNFLPNIFMELTNLTILDLSDCQLEQVSQVAFNSLPKLQLLNM 527
Query: 297 HHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHL-SNLTTLDLSHN 347
HN + L+ + L +L LD + NRIVA L H SNL++L+L+ N
Sbjct: 528 SHNHLLSLDTLPYEPLHSLQTLDCSFNRIVASKEQELRHFPSNLSSLNLTRN 579
Score = 160 (61.4 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 82/267 (30%), Positives = 112/267 (41%)
Query: 146 QALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLM 205
Q L L N PT L PL L S N++ + T K L SL FLDLS N
Sbjct: 333 QRLELVNCEFEQFPTWKLDPLK----ELVFSANEV-RNAFTQVK-LESLEFLDLSRNDF- 385
Query: 206 TLSQDCLA-PLVTLRV--LRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVP 262
+L C L T R+ L L N + +++ + GL + LD H+ L S
Sbjct: 386 SLKSCCSERDLGTTRLKHLDLSFNNI-ITISSNFLGLEQLEYLDFQHSSLKQVSDFSVFL 444
Query: 263 RLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI-DVLEDHSFRALSTLSHLDLA 321
L +L+ L I++ G GL L L N D + F L+ L+ LDL+
Sbjct: 445 PLKNLRYLDISYTHTQVAFHGIFNGLISLQILKMAGNSFQDNFLPNIFMELTNLTILDLS 504
Query: 322 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI--SMEPEC 379
++ VS + L L L++SHN L +L PL SLQ L N I S E E
Sbjct: 505 DCQLEQVSQVAFNSLPKLQLLNMSHNHLLSLDTLPYEPLHSLQTLDCSFNRIVASKEQEL 564
Query: 380 IYVGFNTMDLELI---YSGVWRHSTLL 403
+ N L L ++ V H + L
Sbjct: 565 RHFPSNLSSLNLTRNDFACVCEHQSFL 591
Score = 137 (53.3 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 58/186 (31%), Positives = 84/186 (45%)
Query: 192 SSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNL 251
SS LD+S+N L L + L+VL L + + A QGL ++ L L+ N
Sbjct: 54 SSTKDLDMSFNPLRNLGSHSFSNFPELQVLDLSRCEIQIIEDDAYQGLNHLSILILTGNP 113
Query: 252 LAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLE-DHSFR 310
+ L P LSSL+ L +S+ + L L L+ HN I + F
Sbjct: 114 IQR-LFPGAFSGLSSLQTLVAVETNIASLEDFPIGHLKTLKELNVAHNLIHSFKLPEYFS 172
Query: 311 ALSTLSHLDLAHNRIVAVSGASLA--H---LSNLTTLDLSHNFLRALTQDLITPLKSLQE 365
+S L +LDL++N+I + L H L NL+ LDLS N L + +K L+E
Sbjct: 173 NMSNLEYLDLSNNKIQNIYHKDLQVLHQKPLLNLS-LDLSLNPLDFIQPGAFKEVK-LRE 230
Query: 366 LRLDDN 371
L L N
Sbjct: 231 LTLRSN 236
Score = 127 (49.8 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 37/134 (27%), Positives = 62/134 (46%)
Query: 241 SVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQ 300
S DLD+S N L LG + L+VL ++ + + A GL+ L+ L N
Sbjct: 55 STKDLDMSFNPLRN-LGSHSFSNFPELQVLDLSRCEIQIIEDDAYQGLNHLSILILTGNP 113
Query: 301 IDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALT-QDLITP 359
I L +F LS+L L I ++ + HL L L+++HN + + + +
Sbjct: 114 IQRLFPGAFSGLSSLQTLVAVETNIASLEDFPIGHLKTLKELNVAHNLIHSFKLPEYFSN 173
Query: 360 LKSLQELRLDDNDI 373
+ +L+ L L +N I
Sbjct: 174 MSNLEYLDLSNNKI 187
Score = 125 (49.1 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 60/243 (24%), Positives = 110/243 (45%)
Query: 97 VSLLDCTLSNVTVLPGKFLEGVT-LHGLVISSGELKNISDGAFIGLSSPLQAL-GLPNNL 154
+ +LD + + ++ +G+ L L+++ ++ + GAF GLSS LQ L + N+
Sbjct: 80 LQVLDLSRCEIQIIEDDAYQGLNHLSILILTGNPIQRLFPGAFSGLSS-LQTLVAVETNI 138
Query: 155 LSVVPTSALAPLAPNLDRLDLSHNQLYKLENTS-FKGLSSLNFLDLSYNKLMTLSQDCLA 213
S+ + L L L+++HN ++ + F +S+L +LDLS NK+ + L
Sbjct: 139 ASL-EDFPIGHLK-TLKELNVAHNLIHSFKLPEYFSNMSNLEYLDLSNNKIQNIYHKDLQ 196
Query: 214 -----PLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLK 268
PL+ L L L N L A + ++ + +L L N + + +++ L+ L+
Sbjct: 197 VLHQKPLLNLS-LDLSLNPLDFIQPGAFKEVK-LRELTLRSNFNSTDVMKASIQGLAGLQ 254
Query: 269 VLSIAHNQFSSVR------RGALAGLDKLTSLSCHHNQIDVL-ED--HSFRALSTLSHLD 319
+ + +F + R + L GL L D ED SF L+ +S +
Sbjct: 255 IHQLVLGEFKNERNLGRFDKSILEGLCNLIIEKFRIAYFDKFSEDAIDSFNCLANVSTIS 314
Query: 320 LAH 322
L H
Sbjct: 315 LVH 317
Score = 123 (48.4 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 51/182 (28%), Positives = 76/182 (41%)
Query: 173 LDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSV 232
LD+S N L L + SF L LDLS ++ + D L L +L L GN +
Sbjct: 59 LDMSFNPLRNLGSHSFSNFPELQVLDLSRCEIQIIEDDAYQGLNHLSILILTGNPIQRLF 118
Query: 233 VAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGA-LAGLDKL 291
A GL S+ L +A L + L +LK L++AHN S + + + L
Sbjct: 119 PGAFSGLSSLQTLVAVETNIAS-LEDFPIGHLKTLKELNVAHNLIHSFKLPEYFSNMSNL 177
Query: 292 TSLSCHHNQIDVLEDHSFRALS-----TLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSH 346
L +N+I + + L LS LDL+ N + + + + L L L
Sbjct: 178 EYLDLSNNKIQNIYHKDLQVLHQKPLLNLS-LDLSLNPLDFIQPGAFKEVK-LRELTLRS 235
Query: 347 NF 348
NF
Sbjct: 236 NF 237
Score = 121 (47.7 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 43/177 (24%), Positives = 85/177 (48%)
Query: 168 PNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNR 227
P L LDLS ++ +E+ +++GL+ L+ L L+ N + L + L +L+ L
Sbjct: 78 PELQVLDLSRCEIQIIEDDAYQGLNHLSILILTGNPIQRLFPGAFSGLSSLQTLVAVETN 137
Query: 228 LTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAG 287
+ + L+++ +L+++HNL+ P +S+L+ L +++N+ ++ L
Sbjct: 138 IASLEDFPIGHLKTLKELNVAHNLIHSFKLPEYFSNMSNLEYLDLSNNKIQNIYHKDLQV 197
Query: 288 LDKLT----SLSCHHNQIDVLEDHSFRALSTLSHLDLAHN-RIVAVSGASLAHLSNL 339
L + SL N +D ++ +F+ + L L L N V AS+ L+ L
Sbjct: 198 LHQKPLLNLSLDLSLNPLDFIQPGAFKEVK-LRELTLRSNFNSTDVMKASIQGLAGL 253
Score = 51 (23.0 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
L++L +L ++ Q V + A L KL L+ HN +
Sbjct: 495 LTNLTILDLSDCQLEQVSQVAFNSLPKLQLLNMSHNHL 532
Score = 50 (22.7 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
L L++L+++HN S+ L L +L C N+I
Sbjct: 519 LPKLQLLNMSHNHLLSLDTLPYEPLHSLQTLDCSFNRI 556
Score = 45 (20.9 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 647 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHS 688
LK L ++ N ++ L GL++L L H+ + + D S
Sbjct: 401 LKHLDLSFNNIITISSNFL-GLEQLEYLDFQHSSLKQVSDFS 441
Score = 40 (19.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 640 TTILLSSLKVLSIAHNQFS 658
T + L SL+ L ++ N FS
Sbjct: 368 TQVKLESLEFLDLSRNDFS 386
>TAIR|locus:2094603 [details] [associations]
symbol:RLP37 "receptor like protein 37" species:3702
"Arabidopsis thaliana" [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006952 "defense response" evidence=ISS] [GO:0016301 "kinase
activity" evidence=ISS] [GO:0007165 "signal transduction"
evidence=IC] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
EMBL:CP002686 GenomeReviews:BA000014_GR eggNOG:COG4886
InterPro:IPR025875 Pfam:PF12799 InterPro:IPR013210 Pfam:PF08263
EMBL:AB026655 HOGENOM:HOG000116562 ProtClustDB:CLSN2684197
IPI:IPI00538273 RefSeq:NP_188952.1 UniGene:At.65132
ProteinModelPortal:Q9LS80 SMR:Q9LS80 PRIDE:Q9LS80
EnsemblPlants:AT3G23110.1 GeneID:821886 KEGG:ath:AT3G23110
TAIR:At3g23110 InParanoid:Q9LS80 OMA:INCEWME PhylomeDB:Q9LS80
Genevestigator:Q9LS80 Uniprot:Q9LS80
Length = 835
Score = 221 (82.9 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 87/275 (31%), Positives = 122/275 (44%)
Query: 139 IGLSSPLQALGLP-NNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFL 197
IG S L L L N L+ P S + L L+ +DL N L TSF L+ L+ L
Sbjct: 132 IGNLSHLTYLDLSFNQLVGEFPVS-IGNLN-QLEYIDLWVNALGGNIPTSFANLTKLSEL 189
Query: 198 DLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLG 257
L N+ T L+ L +L ++ L N ++ A L L ++ +S N GP
Sbjct: 190 HLRQNQF-TGGDIVLSNLTSLSIVDLSSNYFNSTISADLSQLHNLERFWVSENSFFGPF- 247
Query: 258 PSTVPRLSSLKVLSIAHNQFSS-VRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLS 316
PS + + SL + ++ NQF + G KLT L +N +D L S L +L
Sbjct: 248 PSFLLMIPSLVDICLSENQFEGPINFGNTTSSSKLTELDVSYNNLDGLIPKSISTLVSLE 307
Query: 317 HLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISME 376
HL+L+HN +S++ L NL L LSHN I L +L+ L L ND
Sbjct: 308 HLELSHNNFRGQVPSSISKLVNLDGLYLSHNNFGGQVPSSIFKLVNLEHLDLSHNDFGGR 367
Query: 377 -PECIYVGFNTMDLELIYS---G-----VWRHSTL 402
P I N L+L Y+ G +WR S L
Sbjct: 368 VPSSISKLVNLSSLDLSYNKFEGHVPQCIWRSSKL 402
Score = 162 (62.1 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 60/218 (27%), Positives = 99/218 (45%)
Query: 156 SVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPL 215
S+ +S+L L +L L+LSH L +S LS L +LDLS+N+L+ + L
Sbjct: 101 SLKSSSSLFKLR-HLRHLELSHCNLQGEIPSSIGNLSHLTYLDLSFNQLVGEFPVSIGNL 159
Query: 216 VTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHN 275
L + L N L ++ + L +++L L N G G + L+SL ++ ++ N
Sbjct: 160 NQLEYIDLWVNALGGNIPTSFANLTKLSELHLRQNQFTG--GDIVLSNLTSLSIVDLSSN 217
Query: 276 QFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVA-VSGASLA 334
F+S L+ L L N + +L + L+ N+ ++ +
Sbjct: 218 YFNSTISADLSQLHNLERFWVSENSFFGPFPSFLLMIPSLVDICLSENQFEGPINFGNTT 277
Query: 335 HLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDND 372
S LT LD+S+N L L I+ L SL+ L L N+
Sbjct: 278 SSSKLTELDVSYNNLDGLIPKSISTLVSLEHLELSHNN 315
Score = 157 (60.3 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 57/221 (25%), Positives = 93/221 (42%)
Query: 169 NLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRL 228
+L +DLS N + L +L +S N L + +L + L N+
Sbjct: 208 SLSIVDLSSNYFNSTISADLSQLHNLERFWVSENSFFGPFPSFLLMIPSLVDICLSENQF 267
Query: 229 TVSV-VAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAG 287
+ +T+LD+S+N L G L P ++ L SL+ L ++HN F +++
Sbjct: 268 EGPINFGNTTSSSKLTELDVSYNNLDG-LIPKSISTLVSLEHLELSHNNFRGQVPSSISK 326
Query: 288 LDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHN 347
L L L HN S L L HLDL+HN +S++ L NL++LDLS+N
Sbjct: 327 LVNLDGLYLSHNNFGGQVPSSIFKLVNLEHLDLSHNDFGGRVPSSISKLVNLSSLDLSYN 386
Query: 348 FLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMD 388
I L + L N + + +G +++
Sbjct: 387 KFEGHVPQCIWRSSKLDSVDLSYNSFNSFGRILELGDESLE 427
Score = 49 (22.3 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 11/39 (28%), Positives = 22/39 (56%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID 682
L +L+ L ++HN F +++ L L+SL +N+ +
Sbjct: 351 LVNLEHLDLSHNDFGGRVPSSISKLVNLSSLDLSYNKFE 389
Score = 48 (22.0 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 643 LLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
LLS L L+++ N F+ +LA + KL +L N +
Sbjct: 670 LLSELLHLNLSGNAFTGNIPPSLASITKLETLDLSRNNL 708
Score = 48 (22.0 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 13/46 (28%), Positives = 25/46 (54%)
Query: 644 LSSLKVLSIAHNQFSS-VRRGALAGLDKLTSLSCHHNQIDVLEDHS 688
++ L+ L ++ N S + RG L L L++++ HN ++ L S
Sbjct: 695 ITKLETLDLSRNNLSGEIPRG-LGKLSFLSNINFSHNHLEGLVPQS 739
Score = 41 (19.5 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 13/50 (26%), Positives = 20/50 (40%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNVI 693
L +L L ++HN F ++ L L L HN S S ++
Sbjct: 327 LVNLDGLYLSHNNFGGQVPSSIFKLVNLEHLDLSHNDFGGRVPSSISKLV 376
>UNIPROTKB|Q5I2M7 [details] [associations]
symbol:TLR9 "Toll-like receptor 9" species:9685 "Felis
catus" [GO:0005764 "lysosome" evidence=ISS] [GO:0005768 "endosome"
evidence=ISS] [GO:0005783 "endoplasmic reticulum" evidence=ISS]
[GO:0032009 "early phagosome" evidence=ISS] [GO:0035197 "siRNA
binding" evidence=ISS] [GO:0045078 "positive regulation of
interferon-gamma biosynthetic process" evidence=ISS] [GO:0045356
"positive regulation of interferon-alpha biosynthetic process"
evidence=ISS] [GO:0045359 "positive regulation of interferon-beta
biosynthetic process" evidence=ISS] InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR027181 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51450 GO:GO:0005783 GO:GO:0016021 GO:GO:0005886
GO:GO:0007165 GO:GO:0005789 GO:GO:0005768 GO:GO:0006954
GO:GO:0045944 GO:GO:0045087 GO:GO:0032755 GO:GO:0030277
GO:GO:0005764 GO:GO:0051607 GO:GO:0050727 GO:GO:0032715
GO:GO:0032009 GO:GO:0035197 GO:GO:0032760 GO:GO:0032735
GO:GO:0051770 GO:GO:0045078 GO:GO:0032733 GO:GO:0032728
SUPFAM:SSF52200 GO:GO:0045359 GO:GO:0032741 GO:GO:0045356
eggNOG:NOG286662 HOGENOM:HOG000230468 HOVERGEN:HBG018601
OrthoDB:EOG47SSDD PANTHER:PTHR24373:SF37 EMBL:AY137581
EMBL:AY859724 RefSeq:NP_001009285.1 ProteinModelPortal:Q5I2M7
STRING:Q5I2M7 Ensembl:ENSFCAT00000015710 GeneID:493839
KEGG:fca:493839 CTD:54106 Uniprot:Q5I2M7
Length = 1031
Score = 222 (83.2 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 101/343 (29%), Positives = 159/343 (46%)
Query: 100 LDCTLSN-VTVLPGKFLEGVTLHGLVISSGELKNISDGA-FIGLSSPLQALGLPNNLLSV 157
LD + +N VT+ P F L L++S + +G+ F+ L+S LQ L L +N L +
Sbjct: 477 LDLSRNNLVTIQPEMFARLSRLQCLLLSRNSISQAVNGSQFMPLTS-LQVLDLSHNKLDL 535
Query: 158 VPTSALAPLAPNLDRLDLSHN-QLYKLE----NTSFKG-LSSLNFLDLSYNKLMT-LSQD 210
+ L P L+ LDLS+N Q + ++ N SF L +L +L L++N + + +SQ
Sbjct: 536 YHGRSFTEL-PRLEALDLSYNSQPFSMQGVGHNLSFVAQLPALRYLSLAHNDIHSRVSQQ 594
Query: 211 -CLAPLVTLRVLRLQGNRLTVSVVAA------LQGLRSVTDLDLSHNLLAGPLGPSTVPR 263
C A +LR L GN L+ +GLRS+ LDLS N L L P T+
Sbjct: 595 LCSA---SLRALDFSGNALSRMWAEGDLYLHFFRGLRSLVRLDLSQNRLHTLL-PRTLDN 650
Query: 264 L-SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 322
L SL++L + N + +L L +L +L NQ+ L + S + L LDL+
Sbjct: 651 LPKSLRLLRLRDNYLAFFNWSSLVLLPRLEALDLAGNQLKALSNGSLPNGTQLQRLDLSS 710
Query: 323 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLK-SLQELRLDDNDISMEPECIY 381
N I V+ + A + L L+LS N L+ + L +L+ L + N + +
Sbjct: 711 NSISFVASSFFALATRLRELNLSANALKTVEPSWFGSLAGTLKVLDVTGNPLHCACGAAF 770
Query: 382 VGFNTMDLELIYSGVWRHSTLLIPVMLSLCTRSSVVTRYRYCV 424
V F ++++ G+ H P L RS R C+
Sbjct: 771 VDF-LLEVQAAVPGLPGHVKCGSPGQLQ--GRSIFAQDLRLCL 810
Score = 159 (61.0 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 74/232 (31%), Positives = 108/232 (46%)
Query: 141 LSSPLQALGLPNN----LLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNF 196
L LQ GL N L SV SA AP N+ L L N+++ L ++ F LSSL
Sbjct: 33 LPCELQRHGLVNCDWLFLKSVPHFSAAAPRG-NVTSLSLYSNRIHHLHDSDFVHLSSLRR 91
Query: 197 LDLSYN----KLMTLSQDC---LAPLVTLRVLRLQGNRLTVSVVAALQGL-RSVTDLDLS 248
L+L +N L + C + P L V L+ L+ + + + L S+ L LS
Sbjct: 92 LNLKWNCPPASLSPMHFPCHMTIEPHTFLAVPTLEELNLSYNSITTVPALPSSLVSLSLS 151
Query: 249 H-NLLAGPLGPSTVPRLSSLKVLSIAHN--------QFSSVRRGALAGLDKLTSLSCHHN 299
N+L L P+ + L SL+ L + N Q V GAL GL LT LS +N
Sbjct: 152 RTNILV--LDPANLAGLHSLRFLFLDGNCYYKNPCPQALQVAPGALLGLGNLTHLSLKYN 209
Query: 300 QIDVLEDHSFRALS-TLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLR 350
+ + R L +L +L L++N I+ ++ LA+L+ L LD+ N R
Sbjct: 210 NLTAVP----RGLPPSLEYLLLSYNHIITLAPEDLANLTALRVLDVGGNCRR 257
Score = 131 (51.2 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 88/330 (26%), Positives = 136/330 (41%)
Query: 69 PHTLRCTANKSDLYAISESLRGLE--PDERVSLLDCTLSNVTVLPGKFLEGV-TLHGLVI 125
PHT +L S+ + P VSL + +N+ VL L G+ +L L +
Sbjct: 116 PHTFLAVPTLEELNLSYNSITTVPALPSSLVSL-SLSRTNILVLDPANLAGLHSLRFLFL 174
Query: 126 SSG-ELKN-------ISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSH 177
KN ++ GA +GL + L L L N L+ VP L P+L+ L LS+
Sbjct: 175 DGNCYYKNPCPQALQVAPGALLGLGN-LTHLSLKYNNLTAVPRG----LPPSLEYLLLSY 229
Query: 178 NQLYKLENTSFKGLSSLNFLDLSYN--KLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAA 235
N + L L++L LD+ N + C+ L T S +
Sbjct: 230 NHIITLAPEDLANLTALRVLDVGGNCRRCDHARNPCMECPKGFPHLHPD----TFSHLNH 285
Query: 236 LQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHN-QFSSVRRG-ALAGLDKLTS 293
L+GL + D L +NL P L +L VL ++ N + + + A GL +L
Sbjct: 286 LEGL-VLKDSSL-YNL-----NPRWFHALGNLMVLDLSENFLYDCITKTTAFQGLAQLRR 338
Query: 294 LSC---HHNQIDVLEDH---SFRALSTLSHLDLAHNRIVAVSGA---SLAHLSNLTTLDL 344
L+ +H ++ H SF +L +L LD+ ++S SL HL L +L L
Sbjct: 339 LNLSFNYHKKVSFAHLHLAPSFGSLLSLQQLDMHGIFFRSLSETTLRSLVHLPMLQSLHL 398
Query: 345 SHNFLRALTQDLITPLKSLQELRLDDNDIS 374
NF+ + L+ + L DN IS
Sbjct: 399 QMNFINQAQLSIFGAFPGLRYVDLSDNRIS 428
Score = 124 (48.7 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 84/307 (27%), Positives = 129/307 (42%)
Query: 95 ERVSLLDCTLSNVTVLPGKFLEGVTLHG---LVISSGELKNISDGAFIGLSSPLQALGLP 151
E ++L +++ V LP L ++L LV+ L + F+ L
Sbjct: 126 EELNLSYNSITTVPALPSS-LVSLSLSRTNILVLDPANLAGLHSLRFLFLDGNCYYKNPC 184
Query: 152 NNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLS-SLNFLDLSYNKLMTLSQD 210
L V P AL L NL L L +N L + +GL SL +L LSYN ++TL+ +
Sbjct: 185 PQALQVAP-GALLGLG-NLTHLSLKYNNLTAVP----RGLPPSLEYLLLSYNHIITLAPE 238
Query: 211 CLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGP-LGPSTVPRLSSLKV 269
LA L LRVL + GN R+ ++ P L P T L+ L+
Sbjct: 239 DLANLTALRVLDVGGN------CRRCDHARNPC-MECPKGF---PHLHPDTFSHLNHLEG 288
Query: 270 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI-D-VLEDHSFRALSTLSHLDLAHNRIVA 327
L + + ++ L L L N + D + + +F+ L+ L L+L+ N
Sbjct: 289 LVLKDSSLYNLNPRWFHALGNLMVLDLSENFLYDCITKTTAFQGLAQLRRLNLSFNYHKK 348
Query: 328 VSGASLAHLS-------NLTTLDLSHNFLRALTQDLITPL---KSLQELRLDDNDISMEP 377
VS A L HL+ +L LD+ F R+L++ + L LQ L L N I+
Sbjct: 349 VSFAHL-HLAPSFGSLLSLQQLDMHGIFFRSLSETTLRSLVHLPMLQSLHLQMNFINQAQ 407
Query: 378 ECIYVGF 384
I+ F
Sbjct: 408 LSIFGAF 414
Score = 65 (27.9 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 21/71 (29%), Positives = 33/71 (46%)
Query: 624 DINRNNSDSRYVKLQATTIL-LSSLKVLSIAHNQFSSVRRGA-LAGLDKLTSLSCHHNQI 681
D++RNN V +Q LS L+ L ++ N S G+ L L L HN++
Sbjct: 478 DLSRNN----LVTIQPEMFARLSRLQCLLLSRNSISQAVNGSQFMPLTSLQVLDLSHNKL 533
Query: 682 DVLEDHSFSNV 692
D+ SF+ +
Sbjct: 534 DLYHGRSFTEL 544
Score = 57 (25.1 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 14/52 (26%), Positives = 25/52 (48%)
Query: 639 ATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFS 690
++ +LL L+ L +A NQ ++ G+L +L L N I + F+
Sbjct: 671 SSLVLLPRLEALDLAGNQLKALSNGSLPNGTQLQRLDLSSNSISFVASSFFA 722
Score = 51 (23.0 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 679
L+SL+VL ++HN+ + L +L +L +N
Sbjct: 520 LTSLQVLDLSHNKLDLYHGRSFTELPRLEALDLSYN 555
Score = 49 (22.3 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 18/64 (28%), Positives = 29/64 (45%)
Query: 630 SDSRYVKLQATTI--LLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDH 687
S +R L T+ L SL++L + N + +L L +L +L NQ+ L +
Sbjct: 636 SQNRLHTLLPRTLDNLPKSLRLLRLRDNYLAFFNWSSLVLLPRLEALDLAGNQLKALSNG 695
Query: 688 SFSN 691
S N
Sbjct: 696 SLPN 699
Score = 40 (19.1 bits), Expect = 8.9e-07, Sum P(2) = 8.9e-07
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 644 LSSLKVLSIAHNQFSS 659
L +L+ LS+AHN S
Sbjct: 574 LPALRYLSLAHNDIHS 589
>UNIPROTKB|F1NVW6 [details] [associations]
symbol:F1NVW6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000902 "cell morphogenesis" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007599 "hemostasis"
evidence=IEA] [GO:0031362 "anchored to external side of plasma
membrane" evidence=IEA] [GO:0042730 "fibrinolysis" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0042730 InterPro:IPR003591
SMART:SM00369 GO:GO:0007155 InterPro:IPR000372 SMART:SM00013
GO:GO:0031362 GeneTree:ENSGT00690000102197 EMBL:AADN02063514
EMBL:AADN02063515 IPI:IPI00571680 ProteinModelPortal:F1NVW6
Ensembl:ENSGALT00000035204 OMA:LTENPWH Uniprot:F1NVW6
Length = 225
Score = 195 (73.7 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 58/158 (36%), Positives = 80/158 (50%)
Query: 220 VLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSS 279
+L L NRL AA Q L ++ DLDLS N L L + +P SLK L ++HN +
Sbjct: 33 ILLLNANRLLSVSTAAFQKLAALQDLDLSDNGLQAVLTEAALP---SLKELLLSHNALEA 89
Query: 280 VRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNL 339
+ AL GL LT L+ HN++ L +FRA+ L LDL N + + + L L
Sbjct: 90 LP--ALQGLPALTRLALAHNKLQALAPAAFRAVPQLQDLDLRGNALRTLPEDAFMGLRVL 147
Query: 340 TTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEP 377
LDLS N L L + L+ L +L+ L L N + P
Sbjct: 148 KDLDLSDNALEELPRGLLQDLVTLETLWLSGNRLRALP 185
Score = 177 (67.4 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 60/184 (32%), Positives = 95/184 (51%)
Query: 100 LDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVP 159
++CT +++ +P E + L++++ L ++S AF L++ LQ L L +N L V
Sbjct: 13 VNCTGRDLSAVPAGLPENTGI--LLLNANRLLSVSTAAFQKLAA-LQDLDLSDNGLQAVL 69
Query: 160 TSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLR 219
T A P +L L LSHN L L + +GL +L L L++NKL L+ + L+
Sbjct: 70 TEAALP---SLKELLLSHNALEALP--ALQGLPALTRLALAHNKLQALAPAAFRAVPQLQ 124
Query: 220 VLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSS 279
L L+GN L A GLR + DLDLS N L L + L +L+ L ++ N+ +
Sbjct: 125 DLDLRGNALRTLPEDAFMGLRVLKDLDLSDNALE-ELPRGLLQDLVTLETLWLSGNRLRA 183
Query: 280 VRRG 283
+ G
Sbjct: 184 LPSG 187
Score = 136 (52.9 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 48/160 (30%), Positives = 78/160 (48%)
Query: 230 VSVVAALQGLRSVTD-LDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGL 288
+S V A GL T L L+ N L + + +L++L+ L ++ N +V A L
Sbjct: 20 LSAVPA--GLPENTGILLLNANRLLS-VSTAAFQKLAALQDLDLSDNGLQAVLTEA--AL 74
Query: 289 DKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNF 348
L L HN ++ L + + L L+ L LAHN++ A++ A+ + L LDL N
Sbjct: 75 PSLKELLLSHNALEALP--ALQGLPALTRLALAHNKLQALAPAAFRAVPQLQDLDLRGNA 132
Query: 349 LRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMD 388
LR L +D L+ L++L L DN + P + T++
Sbjct: 133 LRTLPEDAFMGLRVLKDLDLSDNALEELPRGLLQDLVTLE 172
>TAIR|locus:2120362 [details] [associations]
symbol:GSO1 "GASSHO1" species:3702 "Arabidopsis thaliana"
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0006468 "protein
phosphorylation" evidence=IEA;ISS] [GO:0007169 "transmembrane
receptor protein tyrosine kinase signaling pathway" evidence=ISS]
[GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0008544 "epidermis
development" evidence=IGI] [GO:0009790 "embryo development"
evidence=IGI] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000719
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
GO:GO:0016021 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
SUPFAM:SSF56112 GO:GO:0004674 eggNOG:COG4886 EMBL:AL161552
Gene3D:2.60.120.200 InterPro:IPR013320 GO:GO:0009790 GO:GO:0008544
InterPro:IPR025875 Pfam:PF12799 HOGENOM:HOG000116551
InterPro:IPR013210 Pfam:PF08263 EMBL:AL022224 EMBL:FJ708746
IPI:IPI00535203 PIR:T05322 RefSeq:NP_193747.2 UniGene:At.2179
UniGene:At.22288 ProteinModelPortal:C0LGQ5 SMR:C0LGQ5 PaxDb:C0LGQ5
PRIDE:C0LGQ5 EnsemblPlants:AT4G20140.1 GeneID:827760
KEGG:ath:AT4G20140 GeneFarm:663 TAIR:At4g20140 InParanoid:Q9SN91
OMA:EDIMEAT PhylomeDB:C0LGQ5 ProtClustDB:CLSN2687271 Uniprot:C0LGQ5
Length = 1249
Score = 216 (81.1 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 83/261 (31%), Positives = 121/261 (46%)
Query: 152 NNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDC 211
NNL+ +PT AL+ L +L+ L L NQL + L ++ L + N+L+ +
Sbjct: 105 NNLVGPIPT-ALSNLT-SLESLFLFSNQLTGEIPSQLGSLVNIRSLRIGDNELVGDIPET 162
Query: 212 LAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLS 271
L LV L++L L RLT + + L L V L L N L GP+ P+ + S L V +
Sbjct: 163 LGNLVNLQMLALASCRLTGPIPSQLGRLVRVQSLILQDNYLEGPI-PAELGNCSDLTVFT 221
Query: 272 IAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGA 331
A N + L L+ L L+ +N + +S L +L L N++ +
Sbjct: 222 AAENMLNGTIPAELGRLENLEILNLANNSLTGEIPSQLGEMSQLQYLSLMANQLQGLIPK 281
Query: 332 SLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISME-PECIYVGFNTMDLE 390
SLA L NL TLDLS N L + + L +L L +N +S P+ I NT +
Sbjct: 282 SLADLGNLQTLDLSANNLTGEIPEEFWNMSQLLDLVLANNHLSGSLPKSICSN-NTNLEQ 340
Query: 391 LIYSGVWRHSTLLIPVMLSLC 411
L+ SG IPV LS C
Sbjct: 341 LVLSGTQLSGE--IPVELSKC 359
Score = 206 (77.6 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 92/316 (29%), Positives = 131/316 (41%)
Query: 68 LPHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISS 127
+P + L + SL+G PD +SL + T N L L G T+H L SS
Sbjct: 520 IPSSFGFLKGLEQLMLYNNSLQGNLPDSLISLRNLTRIN---LSHNRLNG-TIHPLCGSS 575
Query: 128 GELK-NISDGAF-------IGLSSPLQALGL-PNNLLSVVPTSALAPLAPNLDRLDLSHN 178
L ++++ F +G S L L L N L +P + L + L LD+S N
Sbjct: 576 SYLSFDVTNNGFEDEIPLELGNSQNLDRLRLGKNQLTGKIPWT-LGKIR-ELSLLDMSSN 633
Query: 179 QLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQG 238
L L +DL+ N L L L L L+L N+ S+ L
Sbjct: 634 ALTGTIPLQLVLCKKLTHIDLNNNFLSGPIPPWLGKLSQLGELKLSSNQFVESLPTELFN 693
Query: 239 LRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHH 298
+ L L N L G + P + L +L VL++ NQFS A+ L KL L
Sbjct: 694 CTKLLVLSLDGNSLNGSI-PQEIGNLGALNVLNLDKNQFSGSLPQAMGKLSKLYELRLSR 752
Query: 299 NQIDVLEDHSFRALSTL-SHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLI 357
N + L L S LDL++N +++ LS L TLDLSHN L +
Sbjct: 753 NSLTGEIPVEIGQLQDLQSALDLSYNNFTGDIPSTIGTLSKLETLDLSHNQLTGEVPGSV 812
Query: 358 TPLKSLQELRLDDNDI 373
+KSL L + N++
Sbjct: 813 GDMKSLGYLNVSFNNL 828
Score = 199 (75.1 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 84/310 (27%), Positives = 138/310 (44%)
Query: 84 ISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSS 143
I E+L L + ++L C L+ +P + V + L++ L+ A +G S
Sbjct: 159 IPETLGNLVNLQMLALASCRLTGP--IPSQLGRLVRVQSLILQDNYLEGPIP-AELGNCS 215
Query: 144 PLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNK 203
L N+L+ + L L NL+ L+L++N L + +S L +L L N+
Sbjct: 216 DLTVFTAAENMLNGTIPAELGRLE-NLEILNLANNSLTGEIPSQLGEMSQLQYLSLMANQ 274
Query: 204 LMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPR 263
L L LA L L+ L L N LT + + + DL L++N L+G L S
Sbjct: 275 LQGLIPKSLADLGNLQTLDLSANNLTGEIPEEFWNMSQLLDLVLANNHLSGSLPKSICSN 334
Query: 264 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 323
++L+ L ++ Q S L+ L L +N + + L L+ L L +N
Sbjct: 335 NTNLEQLVLSGTQLSGEIPVELSKCQSLKQLDLSNNSLAGSIPEALFELVELTDLYLHNN 394
Query: 324 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISME-PECIYV 382
+ S+++L+NL L L HN L I+ L+ L+ L L +N S E P+ +
Sbjct: 395 TLEGTLSPSISNLTNLQWLVLYHNNLEGKLPKEISALRKLEVLFLYENRFSGEIPQ--EI 452
Query: 383 GFNTMDLELI 392
G N L++I
Sbjct: 453 G-NCTSLKMI 461
Score = 186 (70.5 bits), Expect = 6.5e-11, Sum P(2) = 6.5e-11
Identities = 96/337 (28%), Positives = 142/337 (42%)
Query: 68 LPHTLRCTANKSDLYAISESLRGLEPDE--RVS-LLDCTLSNVTV---LPGKFLEGVT-L 120
+P +L N L + +L G P+E +S LLD L+N + LP T L
Sbjct: 279 IPKSLADLGNLQTLDLSANNLTGEIPEEFWNMSQLLDLVLANNHLSGSLPKSICSNNTNL 338
Query: 121 HGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQL 180
LV+S +L + L+ L L NN L+ AL L D L L +N L
Sbjct: 339 EQLVLSGTQLSG-EIPVELSKCQSLKQLDLSNNSLAGSIPEALFELVELTD-LYLHNNTL 396
Query: 181 YKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLR 240
+ S L++L +L L +N L ++ L L VL L NR + + +
Sbjct: 397 EGTLSPSISNLTNLQWLVLYHNNLEGKLPKEISALRKLEVLFLYENRFSGEIPQEIGNCT 456
Query: 241 SVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQ 300
S+ +D+ N G + PS + RL L +L + N+ +L +L L NQ
Sbjct: 457 SLKMIDMFGNHFEGEIPPS-IGRLKELNLLHLRQNELVGGLPASLGNCHQLNILDLADNQ 515
Query: 301 IDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPL 360
+ SF L L L L +N + SL L NLT ++LSHN L I PL
Sbjct: 516 LSGSIPSSFGFLKGLEQLMLYNNSLQGNLPDSLISLRNLTRINLSHNRLNGT----IHPL 571
Query: 361 -KSLQELRLDDNDISMEPEC-IYVGFNTMDLELIYSG 395
S L D + E E + +G N+ +L+ + G
Sbjct: 572 CGSSSYLSFDVTNNGFEDEIPLELG-NSQNLDRLRLG 607
Score = 181 (68.8 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 71/243 (29%), Positives = 105/243 (43%)
Query: 153 NLLSVVPTSALAPLA---PNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQ 209
NL + T +++P NL LDLS N L T+ L+SL L L N+L
Sbjct: 77 NLTGLGLTGSISPWFGRFDNLIHLDLSSNNLVGPIPTALSNLTSLESLFLFSNQLTGEIP 136
Query: 210 DCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKV 269
L LV +R LR+ N L + L L ++ L L+ L GP+ PS + RL ++
Sbjct: 137 SQLGSLVNIRSLRIGDNELVGDIPETLGNLVNLQMLALASCRLTGPI-PSQLGRLVRVQS 195
Query: 270 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 329
L + N L LT + N ++ L L L+LA+N +
Sbjct: 196 LILQDNYLEGPIPAELGNCSDLTVFTAAENMLNGTIPAELGRLENLEILNLANNSLTGEI 255
Query: 330 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISME-PECIYVGFNTMD 388
+ L +S L L L N L+ L + L +LQ L L N+++ E PE + +D
Sbjct: 256 PSQLGEMSQLQYLSLMANQLQGLIPKSLADLGNLQTLDLSANNLTGEIPEEFWNMSQLLD 315
Query: 389 LEL 391
L L
Sbjct: 316 LVL 318
Score = 167 (63.8 bits), Expect = 7.2e-09, Sum P(2) = 7.2e-09
Identities = 84/320 (26%), Positives = 131/320 (40%)
Query: 59 IKNDLCACDLPHTLRCTANKSDLYAISESLRG-LEPD-ERVSLLDCTLSNVTVLPGKFLE 116
+ N+ A +P L +DLY + +L G L P ++ L + L GK +
Sbjct: 367 LSNNSLAGSIPEALFELVELTDLYLHNNTLEGTLSPSISNLTNLQWLVLYHNNLEGKLPK 426
Query: 117 GVT-LHGLVISSGELKNISDGAF---IGLSSPLQALGL-PNNLLSVVPTSALAPLAPNLD 171
++ L L + +N G IG + L+ + + N+ +P S + L L+
Sbjct: 427 EISALRKLEVLF-LYENRFSGEIPQEIGNCTSLKMIDMFGNHFEGEIPPS-IGRLK-ELN 483
Query: 172 RLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVS 231
L L N+L S LN LDL+ N+L L L L L N L +
Sbjct: 484 LLHLRQNELVGGLPASLGNCHQLNILDLADNQLSGSIPSSFGFLKGLEQLMLYNNSLQGN 543
Query: 232 VVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKL 291
+ +L LR++T ++LSHN L G + P + SS + +N F L L
Sbjct: 544 LPDSLISLRNLTRINLSHNRLNGTIHP--LCGSSSYLSFDVTNNGFEDEIPLELGNSQNL 601
Query: 292 TSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRA 351
L NQ+ + + LS LD++ N + L LT +DL++NFL
Sbjct: 602 DRLRLGKNQLTGKIPWTLGKIRELSLLDMSSNALTGTIPLQLVLCKKLTHIDLNNNFLSG 661
Query: 352 LTQDLITPLKSLQELRLDDN 371
+ L L EL+L N
Sbjct: 662 PIPPWLGKLSQLGELKLSSN 681
Score = 141 (54.7 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 83/303 (27%), Positives = 133/303 (43%)
Query: 91 LEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGL 150
L + V + LSN+T L FL L G + S +L G+ + + S L+ +G
Sbjct: 102 LSSNNLVGPIPTALSNLTSLESLFLFSNQLTGEIPS--QL-----GSLVNIRS-LR-IG- 151
Query: 151 PNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQD 210
N L+ +P + L L NL L L+ +L + L + L L N L
Sbjct: 152 DNELVGDIPET-LGNLV-NLQMLALASCRLTGPIPSQLGRLVRVQSLILQDNYLEGPIPA 209
Query: 211 CLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVL 270
L L V N L ++ A L L ++ L+L++N L G + PS + +S L+ L
Sbjct: 210 ELGNCSDLTVFTAAENMLNGTIPAELGRLENLEILNLANNSLTGEI-PSQLGEMSQLQYL 268
Query: 271 SIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSG 330
S+ NQ + +LA L L +L N + F +S L L LA+N +
Sbjct: 269 SLMANQLQGLIPKSLADLGNLQTLDLSANNLTGEIPEEFWNMSQLLDLVLANNHLSGSLP 328
Query: 331 ASL-AHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISME-PECIYVGFNTMD 388
S+ ++ +NL L LS L ++ +SL++L L +N ++ PE ++ D
Sbjct: 329 KSICSNNTNLEQLVLSGTQLSGEIPVELSKCQSLKQLDLSNNSLAGSIPEALFELVELTD 388
Query: 389 LEL 391
L L
Sbjct: 389 LYL 391
Score = 141 (54.7 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 74/259 (28%), Positives = 110/259 (42%)
Query: 120 LHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQ 179
L+ L ++ +L +F G L+ L L NN L +L L NL R++LSHN+
Sbjct: 506 LNILDLADNQLSGSIPSSF-GFLKGLEQLMLYNNSLQGNLPDSLISLR-NLTRINLSHNR 563
Query: 180 LYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGL 239
L + S L+F D++ N L L LRL N+LT + L +
Sbjct: 564 LNGTIHPLCGSSSYLSF-DVTNNGFEDEIPLELGNSQNLDRLRLGKNQLTGKIPWTLGKI 622
Query: 240 RSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 299
R ++ LD+S N L G + P + L + + +N S L L +L L N
Sbjct: 623 RELSLLDMSSNALTGTI-PLQLVLCKKLTHIDLNNNFLSGPIPPWLGKLSQLGELKLSSN 681
Query: 300 Q-IDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHN-FLRALTQDLI 357
Q ++ L F L L L N + + +L L L+L N F +L Q +
Sbjct: 682 QFVESLPTELFNCTKLLV-LSLDGNSLNGSIPQEIGNLGALNVLNLDKNQFSGSLPQAM- 739
Query: 358 TPLKSLQELRLDDNDISME 376
L L ELRL N ++ E
Sbjct: 740 GKLSKLYELRLSRNSLTGE 758
Score = 137 (53.3 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 61/210 (29%), Positives = 87/210 (41%)
Query: 169 NLDRLDLSHNQLY-KLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNR 227
NLDRL L NQL K+ T K + L+ LD+S N L L L + L N
Sbjct: 600 NLDRLRLGKNQLTGKIPWTLGK-IRELSLLDMSSNALTGTIPLQLVLCKKLTHIDLNNNF 658
Query: 228 LTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAG 287
L+ + L L + +L LS N L P+ + + L VLS+ N + +
Sbjct: 659 LSGPIPPWLGKLSQLGELKLSSNQFVESL-PTELFNCTKLLVLSLDGNSLNGSIPQEIGN 717
Query: 288 LDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNL-TTLDLSH 346
L L L+ NQ + LS L L L+ N + + L +L + LDLS+
Sbjct: 718 LGALNVLNLDKNQFSGSLPQAMGKLSKLYELRLSRNSLTGEIPVEIGQLQDLQSALDLSY 777
Query: 347 NFLRALTQDLITPLKSLQELRLDDNDISME 376
N I L L+ L L N ++ E
Sbjct: 778 NNFTGDIPSTIGTLSKLETLDLSHNQLTGE 807
Score = 122 (48.0 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 62/240 (25%), Positives = 99/240 (41%)
Query: 137 AFIGLSSPLQALGLPNNLLS-VVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLN 195
A +G L L L +N LS +P+S L++L L +N L S L +L
Sbjct: 498 ASLGNCHQLNILDLADNQLSGSIPSSF--GFLKGLEQLMLYNNSLQGNLPDSLISLRNLT 555
Query: 196 FLDLSYNKLM-TLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAG 254
++LS+N+L T+ C + + + N + L +++ L L N L G
Sbjct: 556 RINLSHNRLNGTIHPLCGSS--SYLSFDVTNNGFEDEIPLELGNSQNLDRLRLGKNQLTG 613
Query: 255 PLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALST 314
+ P T+ ++ L +L ++ N + L KLT + ++N + LS
Sbjct: 614 KI-PWTLGKIRELSLLDMSSNALTGTIPLQLVLCKKLTHIDLNNNFLSGPIPPWLGKLSQ 672
Query: 315 LSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 374
L L L+ N+ V L + + L L L N L I L +L L LD N S
Sbjct: 673 LGELKLSSNQFVESLPTELFNCTKLLVLSLDGNSLNGSIPQEIGNLGALNVLNLDKNQFS 732
Score = 57 (25.1 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 646 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
SLK L +++N + AL L +LT L H+N ++ S SN+
Sbjct: 361 SLKQLDLSNNSLAGSIPEALFELVELTDLYLHNNTLEGTLSPSISNL 407
Score = 54 (24.1 bits), Expect = 3.7e-14, Sum P(2) = 3.7e-14
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
L +L VL++ NQFS A+ L KL L N +
Sbjct: 718 LGALNVLNLDKNQFSGSLPQAMGKLSKLYELRLSRNSL 755
Score = 54 (24.1 bits), Expect = 3.7e-14, Sum P(2) = 3.7e-14
Identities = 15/58 (25%), Positives = 28/58 (48%)
Query: 624 DINRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
D++ NN + +T LS L+ L ++HNQ + G++ + L L+ N +
Sbjct: 774 DLSYNNFTG---DIPSTIGTLSKLETLDLSHNQLTGEVPGSVGDMKSLGYLNVSFNNL 828
Score = 50 (22.7 bits), Expect = 9.7e-14, Sum P(2) = 9.7e-14
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 650 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
L +++N F+ + L KL +L HNQ+
Sbjct: 773 LDLSYNNFTGDIPSTIGTLSKLETLDLSHNQL 804
Score = 42 (19.8 bits), Expect = 6.6e-13, Sum P(2) = 6.6e-13
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID 682
L L+ L + +N +L L LT ++ HN+++
Sbjct: 527 LKGLEQLMLYNNSLQGNLPDSLISLRNLTRINLSHNRLN 565
Score = 39 (18.8 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 647 LKVLSIAHNQFS-SVRR--GALAGLDKL 671
L +L +A NQ S S+ G L GL++L
Sbjct: 506 LNILDLADNQLSGSIPSSFGFLKGLEQL 533
Score = 39 (18.8 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 13/39 (33%), Positives = 17/39 (43%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID 682
LS L L ++ NQF L KL LS N ++
Sbjct: 670 LSQLGELKLSSNQFVESLPTELFNCTKLLVLSLDGNSLN 708
>UNIPROTKB|E1BU15 [details] [associations]
symbol:SHOC2 "Leucine-rich repeat protein SHOC-2"
species:9031 "Gallus gallus" [GO:0000164 "protein phosphatase type
1 complex" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0019903 "protein phosphatase binding" evidence=IEA] [GO:0046579
"positive regulation of Ras protein signal transduction"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027036
PROSITE:PS51450 GO:GO:0005634 InterPro:IPR003591 SMART:SM00369
InterPro:IPR025875 Pfam:PF12799 GO:GO:0046579 GO:GO:0000164
GeneTree:ENSGT00600000084236 OMA:LPHGIGN PANTHER:PTHR23155:SF38
EMBL:AADN02030891 IPI:IPI00571083 Ensembl:ENSGALT00000014267
Uniprot:E1BU15
Length = 582
Score = 216 (81.1 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 89/330 (26%), Positives = 153/330 (46%)
Query: 69 PHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSG 128
P+ T KS + + L +E LD ++ +LP E L L + S
Sbjct: 75 PNPATGTRKKSSNAEVIKELNKCR-EENSMRLDLAKRSIHMLPSAVKELTQLTELYLYSN 133
Query: 129 ELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSF 188
+L+++ A +G L L L N L+ +P S L L L LDL HN+L ++ + +
Sbjct: 134 KLQSLP--AEVGCLVNLVTLALSENSLTSLPDS-LDNLK-KLRMLDLRHNKLREIPSVVY 189
Query: 189 KGLSSLNFLDLSYNKLMTLSQDC--LAPLVTL-----RVLRLQG------NRLTVSVVA- 234
+ L+SL L L +N++ T+ +D L+ L L ++ +L N +T+ V
Sbjct: 190 R-LTSLATLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHN 248
Query: 235 ALQGL-------RSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAG 287
L+ L +T+LDL HN L P T+ LSSL L + +N+ S++ + +LA
Sbjct: 249 QLEHLPEEIGSCTQITNLDLQHNELLDL--PETIGNLSSLSRLGLRYNRLSAIPK-SLAK 305
Query: 288 LDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHN 347
+L L+ +N I L + +L L+ L LA N + + S + +L++ HN
Sbjct: 306 CSELDELNLENNNISTLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHN 365
Query: 348 FLRALTQDLITPLKSLQELRLDDNDISMEP 377
+ + + + K L +L + DN ++ P
Sbjct: 366 RINKIPFGIFSRAKVLSKLNMKDNQLTSLP 395
Score = 196 (74.1 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 71/232 (30%), Positives = 114/232 (49%)
Query: 143 SPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHN--QLYKLENTS-FKGLSSLNFLDL 199
S L L L NN +S +P L+ L L L L+ N Q Y + S F + SLN +
Sbjct: 307 SELDELNLENNNISTLPEGLLSSLV-KLTSLTLARNCFQSYPVGGPSQFSTIYSLN---M 362
Query: 200 SYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPS 259
+N++ + + L L ++ N+LT S+ S+ +L+L+ N L P
Sbjct: 363 EHNRINKIPFGIFSRAKVLSKLNMKDNQLT-SLPLDFGTWTSMVELNLATNQLTKI--PE 419
Query: 260 TVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 319
V L SL+VL +++N + G + L KL L N+++ L + L L L
Sbjct: 420 DVSGLVSLEVLILSNNLLKKLPHG-IGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLV 477
Query: 320 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
L +N++ + + HL+NLT L L N L L +++ T L++L+EL L+DN
Sbjct: 478 LTNNQLTTLP-RGIGHLTNLTHLGLGENLLTHLPEEIGT-LENLEELYLNDN 527
Score = 189 (71.6 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 86/316 (27%), Positives = 146/316 (46%)
Query: 68 LPHTLRCTANKSDLYAISESLRGLEPDE---RVSLLDCTLS--NVTVLPGKFLEGVTLHG 122
LP ++ ++LY S L+ L P E V+L+ LS ++T LP L
Sbjct: 115 LPSAVKELTQLTELYLYSNKLQSL-PAEVGCLVNLVTLALSENSLTSLPDSLDNLKKLRM 173
Query: 123 LVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYK 182
L + +L+ I + L+S L L L N ++ V + L+ L L + N++ +
Sbjct: 174 LDLRHNKLREIPSVVY-RLTS-LATLYLRFNRITTVEKD-IKNLS-KLTMLSIRENKIKQ 229
Query: 183 LENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSV 242
L L +L LD+++N+L L ++ + + L LQ N L + + + L S+
Sbjct: 230 LP-AEIGELCNLITLDVAHNQLEHLPEE-IGSCTQITNLDLQHNEL-LDLPETIGNLSSL 286
Query: 243 TDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID 302
+ L L +N L+ P ++ + S L L++ +N S++ G L+ L KLTSL+ N
Sbjct: 287 SRLGLRYNRLSAI--PKSLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLARNCFQ 344
Query: 303 VLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKS 362
ST+ L++ HNRI + + L+ L++ N L +L D T S
Sbjct: 345 SYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGT-WTS 403
Query: 363 LQELRLDDNDISMEPE 378
+ EL L N ++ PE
Sbjct: 404 MVELNLATNQLTKIPE 419
Score = 47 (21.6 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 18/66 (27%), Positives = 30/66 (45%)
Query: 621 QEDDINRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQ 680
+E D+ N +S L L L+ L + +NQ +++ RG + L LT L N
Sbjct: 451 RELDLEENKLES----LPNEIAYLKDLQKLVLTNNQLTTLPRG-IGHLTNLTHLGLGENL 505
Query: 681 IDVLED 686
+ L +
Sbjct: 506 LTHLPE 511
Score = 37 (18.1 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 470 LGTVQVYVQLWTNYDPNC-LLTITLYIDGDVIVQKNTNC 507
+GT++ +L+ N +PN L L + + + NC
Sbjct: 513 IGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENC 551
>UNIPROTKB|E2REC5 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050770 "regulation of axonogenesis"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026878 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:57689 KO:K07523 OMA:WITPNGS
PANTHER:PTHR24369:SF8 EMBL:AAEX03011364 RefSeq:XP_540535.1
ProteinModelPortal:E2REC5 Ensembl:ENSCAFT00000010899 GeneID:483417
KEGG:cfa:483417 NextBio:20857811 Uniprot:E2REC5
Length = 639
Score = 218 (81.8 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 65/250 (26%), Positives = 116/250 (46%)
Query: 140 GLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDL 199
G+S+ + L L N + ++ ++ L +L+ L LS N + +E +F GL++LN L+L
Sbjct: 73 GISTNTRLLNLHENQIQIIKVNSFKHLR-HLEILQLSRNHIRTIEIGAFNGLANLNTLEL 131
Query: 200 SYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPS 259
N+L T+ L L+ L L+ N + A + S+ LDL +
Sbjct: 132 FDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEG 191
Query: 260 TVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 319
LS+L+ L++A + L L KL L N + + SF+ L L L
Sbjct: 192 AFEGLSNLRYLNLAMCNLREIPN--LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLW 249
Query: 320 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPEC 379
+ ++I + + +L +L ++L+HN L L DL TPL L+ + L N + +
Sbjct: 250 MIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCDI 309
Query: 380 IYVGFNTMDL 389
+++ + D+
Sbjct: 310 LWLSWWIKDM 319
Score = 183 (69.5 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 59/205 (28%), Positives = 100/205 (48%)
Query: 97 VSLLDCTLSNV-TVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLL 155
+ +L + +++ T+ G F L+ L + L I +GAF+ LS L+ L L NN +
Sbjct: 102 LEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSK-LKELWLRNNPI 160
Query: 156 SVVPTSALAPLAPNLDRLDLSH-NQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAP 214
+P+ A + P+L RLDL +L + +F+GLS+L +L+L+ L + L P
Sbjct: 161 ESIPSYAFNRI-PSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPN--LTP 217
Query: 215 LVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAH 274
L+ L L L GN L+ + QGL + L + + + + + L SL +++AH
Sbjct: 218 LIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQ-VIERNAFDNLQSLVEINLAH 276
Query: 275 NQFSSVRRGALAGLDKLTSLSCHHN 299
N + + L L + HHN
Sbjct: 277 NNLTLLPHDLFTPLHHLERIHLHHN 301
Score = 177 (67.4 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 61/234 (26%), Positives = 106/234 (45%)
Query: 166 LAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQG 225
++ N L+L NQ+ ++ SFK L L L LS N + T+ L L L L
Sbjct: 74 ISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFD 133
Query: 226 NRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPS-TVPRLSSLKVLSIAH-NQFSSVRRG 283
NRLT A L + +L L +N + PS R+ SL+ L + + S + G
Sbjct: 134 NRLTTIPNGAFVYLSKLKELWLRNNPIESI--PSYAFNRIPSLRRLDLGELKRLSYISEG 191
Query: 284 ALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLD 343
A GL L L+ ++ E + L L LDL+ N + A+ S L +L L
Sbjct: 192 AFEGLSNLRYLNLA--MCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLW 249
Query: 344 LSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELIYSGVW 397
+ + ++ + ++ L+SL E+ L N++++ P ++ + ++ ++ W
Sbjct: 250 MIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPW 303
Score = 117 (46.2 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 41/134 (30%), Positives = 63/134 (47%)
Query: 251 LLAGPLGPSTVPRLSSLKVLSIAHNQFSSV---RRGALAGLDKLTS----LSCHHNQIDV 303
++AG + T P + S NQFS V R+ D +++ L+ H NQI +
Sbjct: 37 VVAGLVRAQTCPSVCSCS------NQFSKVICVRKNLREVPDGISTNTRLLNLHENQIQI 90
Query: 304 LEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSL 363
++ +SF+ L L L L+ N I + + L+NL TL+L N L + L L
Sbjct: 91 IKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKL 150
Query: 364 QELRLDDNDISMEP 377
+EL L +N I P
Sbjct: 151 KELWLRNNPIESIP 164
Score = 71 (30.1 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L L ++ N S++R G+ GL L L +QI V+E ++F N+
Sbjct: 218 LIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNL 266
Score = 51 (23.0 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 679
L SL +++AHN + + L L + HHN
Sbjct: 266 LQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHN 301
Score = 50 (22.7 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 12/47 (25%), Positives = 21/47 (44%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFS 690
L L+ L + +Q + R A L L ++ HN + +L F+
Sbjct: 242 LMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFT 288
>UNIPROTKB|F1SHH6 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050770 "regulation of axonogenesis" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026878
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:57689 KO:K07523 OMA:WITPNGS
PANTHER:PTHR24369:SF8 EMBL:CU607014 RefSeq:XP_003122907.1
ProteinModelPortal:F1SHH6 Ensembl:ENSSSCT00000014510
GeneID:100522726 KEGG:ssc:100522726 Uniprot:F1SHH6
Length = 640
Score = 218 (81.8 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 65/250 (26%), Positives = 116/250 (46%)
Query: 140 GLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDL 199
G+S+ + L L N + ++ ++ L +L+ L LS N + +E +F GL++LN L+L
Sbjct: 73 GISTNTRLLNLHENQIQIIKVNSFKHLR-HLEILQLSRNHIRTIEIGAFNGLANLNTLEL 131
Query: 200 SYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPS 259
N+L T+ L L+ L L+ N + A + S+ LDL +
Sbjct: 132 FDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEG 191
Query: 260 TVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 319
LS+L+ L++A + L L KL L N + + SF+ L L L
Sbjct: 192 AFEGLSNLRYLNLAMCNLREIPN--LTPLVKLDELDLSGNHLSAIRPGSFQGLMHLQKLW 249
Query: 320 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPEC 379
+ ++I + + +L +L ++L+HN L L DL TPL L+ + L N + +
Sbjct: 250 MIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCDI 309
Query: 380 IYVGFNTMDL 389
+++ + D+
Sbjct: 310 LWLSWWIKDM 319
Score = 184 (69.8 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 60/205 (29%), Positives = 100/205 (48%)
Query: 97 VSLLDCTLSNV-TVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLL 155
+ +L + +++ T+ G F L+ L + L I +GAF+ LS L+ L L NN +
Sbjct: 102 LEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSK-LKELWLRNNPI 160
Query: 156 SVVPTSALAPLAPNLDRLDLSH-NQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAP 214
+P+ A + P+L RLDL +L + +F+GLS+L +L+L+ L + L P
Sbjct: 161 ESIPSYAFNRI-PSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPN--LTP 217
Query: 215 LVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAH 274
LV L L L GN L+ + QGL + L + + + + + L SL +++AH
Sbjct: 218 LVKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQ-VIERNAFDNLQSLVEINLAH 276
Query: 275 NQFSSVRRGALAGLDKLTSLSCHHN 299
N + + L L + HHN
Sbjct: 277 NNLTLLPHDLFTPLHHLERIHLHHN 301
Score = 177 (67.4 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 61/234 (26%), Positives = 106/234 (45%)
Query: 166 LAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQG 225
++ N L+L NQ+ ++ SFK L L L LS N + T+ L L L L
Sbjct: 74 ISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFD 133
Query: 226 NRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPS-TVPRLSSLKVLSIAH-NQFSSVRRG 283
NRLT A L + +L L +N + PS R+ SL+ L + + S + G
Sbjct: 134 NRLTTIPNGAFVYLSKLKELWLRNNPIESI--PSYAFNRIPSLRRLDLGELKRLSYISEG 191
Query: 284 ALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLD 343
A GL L L+ ++ E + L L LDL+ N + A+ S L +L L
Sbjct: 192 AFEGLSNLRYLNLA--MCNLREIPNLTPLVKLDELDLSGNHLSAIRPGSFQGLMHLQKLW 249
Query: 344 LSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELIYSGVW 397
+ + ++ + ++ L+SL E+ L N++++ P ++ + ++ ++ W
Sbjct: 250 MIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPW 303
Score = 117 (46.2 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 41/134 (30%), Positives = 63/134 (47%)
Query: 251 LLAGPLGPSTVPRLSSLKVLSIAHNQFSSV---RRGALAGLDKLTS----LSCHHNQIDV 303
++AG + T P + S NQFS V R+ D +++ L+ H NQI +
Sbjct: 37 VVAGLVRAQTCPSVCSCS------NQFSKVICVRKNLREVPDGISTNTRLLNLHENQIQI 90
Query: 304 LEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSL 363
++ +SF+ L L L L+ N I + + L+NL TL+L N L + L L
Sbjct: 91 IKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKL 150
Query: 364 QELRLDDNDISMEP 377
+EL L +N I P
Sbjct: 151 KELWLRNNPIESIP 164
Score = 71 (30.1 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L L ++ N S++R G+ GL L L +QI V+E ++F N+
Sbjct: 218 LVKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNL 266
Score = 51 (23.0 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 679
L SL +++AHN + + L L + HHN
Sbjct: 266 LQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHN 301
Score = 50 (22.7 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 12/47 (25%), Positives = 21/47 (44%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFS 690
L L+ L + +Q + R A L L ++ HN + +L F+
Sbjct: 242 LMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFT 288
>UNIPROTKB|Q9HCJ2 [details] [associations]
symbol:LRRC4C "Leucine-rich repeat-containing protein 4C"
species:9606 "Homo sapiens" [GO:0016020 "membrane" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=NAS] [GO:0050770
"regulation of axonogenesis" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026878 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
EMBL:CH471064 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306 HOGENOM:HOG000252924
HOVERGEN:HBG052359 EMBL:AB046800 EMBL:AY358293 EMBL:AK289646
EMBL:BC041374 IPI:IPI00014223 RefSeq:NP_001245348.1
RefSeq:NP_065980.1 UniGene:Hs.741547 PDB:3ZYJ PDBsum:3ZYJ
ProteinModelPortal:Q9HCJ2 SMR:Q9HCJ2 IntAct:Q9HCJ2 STRING:Q9HCJ2
PhosphoSite:Q9HCJ2 DMDM:57012973 PRIDE:Q9HCJ2
Ensembl:ENST00000278198 Ensembl:ENST00000527150
Ensembl:ENST00000528697 Ensembl:ENST00000530763 GeneID:57689
KEGG:hsa:57689 UCSC:uc001mxa.1 CTD:57689 GeneCards:GC11M040135
HGNC:HGNC:29317 MIM:608817 neXtProt:NX_Q9HCJ2 PharmGKB:PA142671534
InParanoid:Q9HCJ2 KO:K07523 OMA:WITPNGS OrthoDB:EOG4XKV6K
PhylomeDB:Q9HCJ2 GenomeRNAi:57689 NextBio:64523 ArrayExpress:Q9HCJ2
Bgee:Q9HCJ2 CleanEx:HS_LRRC4C Genevestigator:Q9HCJ2
GermOnline:ENSG00000148948 PANTHER:PTHR24369:SF8 Uniprot:Q9HCJ2
Length = 640
Score = 218 (81.8 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 65/250 (26%), Positives = 116/250 (46%)
Query: 140 GLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDL 199
G+S+ + L L N + ++ ++ L +L+ L LS N + +E +F GL++LN L+L
Sbjct: 73 GISTNTRLLNLHENQIQIIKVNSFKHLR-HLEILQLSRNHIRTIEIGAFNGLANLNTLEL 131
Query: 200 SYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPS 259
N+L T+ L L+ L L+ N + A + S+ LDL +
Sbjct: 132 FDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEG 191
Query: 260 TVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 319
LS+L+ L++A + L L KL L N + + SF+ L L L
Sbjct: 192 AFEGLSNLRYLNLAMCNLREIPN--LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLW 249
Query: 320 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPEC 379
+ ++I + + +L +L ++L+HN L L DL TPL L+ + L N + +
Sbjct: 250 MIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCDI 309
Query: 380 IYVGFNTMDL 389
+++ + D+
Sbjct: 310 LWLSWWIKDM 319
Score = 183 (69.5 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 59/205 (28%), Positives = 100/205 (48%)
Query: 97 VSLLDCTLSNV-TVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLL 155
+ +L + +++ T+ G F L+ L + L I +GAF+ LS L+ L L NN +
Sbjct: 102 LEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSK-LKELWLRNNPI 160
Query: 156 SVVPTSALAPLAPNLDRLDLSH-NQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAP 214
+P+ A + P+L RLDL +L + +F+GLS+L +L+L+ L + L P
Sbjct: 161 ESIPSYAFNRI-PSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPN--LTP 217
Query: 215 LVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAH 274
L+ L L L GN L+ + QGL + L + + + + + L SL +++AH
Sbjct: 218 LIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQ-VIERNAFDNLQSLVEINLAH 276
Query: 275 NQFSSVRRGALAGLDKLTSLSCHHN 299
N + + L L + HHN
Sbjct: 277 NNLTLLPHDLFTPLHHLERIHLHHN 301
Score = 177 (67.4 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 61/234 (26%), Positives = 106/234 (45%)
Query: 166 LAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQG 225
++ N L+L NQ+ ++ SFK L L L LS N + T+ L L L L
Sbjct: 74 ISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFD 133
Query: 226 NRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPS-TVPRLSSLKVLSIAH-NQFSSVRRG 283
NRLT A L + +L L +N + PS R+ SL+ L + + S + G
Sbjct: 134 NRLTTIPNGAFVYLSKLKELWLRNNPIESI--PSYAFNRIPSLRRLDLGELKRLSYISEG 191
Query: 284 ALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLD 343
A GL L L+ ++ E + L L LDL+ N + A+ S L +L L
Sbjct: 192 AFEGLSNLRYLNLA--MCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLW 249
Query: 344 LSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELIYSGVW 397
+ + ++ + ++ L+SL E+ L N++++ P ++ + ++ ++ W
Sbjct: 250 MIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPW 303
Score = 117 (46.2 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 41/134 (30%), Positives = 63/134 (47%)
Query: 251 LLAGPLGPSTVPRLSSLKVLSIAHNQFSSV---RRGALAGLDKLTS----LSCHHNQIDV 303
++AG + T P + S NQFS V R+ D +++ L+ H NQI +
Sbjct: 37 VVAGLVRAQTCPSVCSCS------NQFSKVICVRKNLREVPDGISTNTRLLNLHENQIQI 90
Query: 304 LEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSL 363
++ +SF+ L L L L+ N I + + L+NL TL+L N L + L L
Sbjct: 91 IKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKL 150
Query: 364 QELRLDDNDISMEP 377
+EL L +N I P
Sbjct: 151 KELWLRNNPIESIP 164
Score = 71 (30.1 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L L ++ N S++R G+ GL L L +QI V+E ++F N+
Sbjct: 218 LIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNL 266
Score = 51 (23.0 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 679
L SL +++AHN + + L L + HHN
Sbjct: 266 LQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHN 301
Score = 50 (22.7 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 12/47 (25%), Positives = 21/47 (44%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFS 690
L L+ L + +Q + R A L L ++ HN + +L F+
Sbjct: 242 LMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFT 288
>MGI|MGI:2442636 [details] [associations]
symbol:Lrrc4c "leucine rich repeat containing 4C"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0016020 "membrane" evidence=ISO;ISS] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0050770 "regulation of
axonogenesis" evidence=ISO;ISS] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026878 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:2442636 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016020 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 HOGENOM:HOG000252924
HOVERGEN:HBG052359 CTD:57689 KO:K07523 OMA:WITPNGS
OrthoDB:EOG4XKV6K PANTHER:PTHR24369:SF8 EMBL:AK032467 EMBL:AK034276
EMBL:AK048322 EMBL:BC094588 IPI:IPI00309419 RefSeq:NP_848840.3
UniGene:Mm.241682 ProteinModelPortal:Q8C031 SMR:Q8C031
DIP:DIP-42049N MINT:MINT-1895606 STRING:Q8C031 PhosphoSite:Q8C031
PRIDE:Q8C031 Ensembl:ENSMUST00000059049 Ensembl:ENSMUST00000135431
Ensembl:ENSMUST00000162807 GeneID:241568 KEGG:mmu:241568
UCSC:uc008lhc.1 InParanoid:Q505E5 ChiTaRS:LRRC4C NextBio:385057
Bgee:Q8C031 CleanEx:MM_LRRC4C Genevestigator:Q8C031
GermOnline:ENSMUSG00000050587 Uniprot:Q8C031
Length = 640
Score = 218 (81.8 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 65/250 (26%), Positives = 116/250 (46%)
Query: 140 GLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDL 199
G+S+ + L L N + ++ ++ L +L+ L LS N + +E +F GL++LN L+L
Sbjct: 73 GISTNTRLLNLHENQIQIIKVNSFKHLR-HLEILQLSRNHIRTIEIGAFNGLANLNTLEL 131
Query: 200 SYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPS 259
N+L T+ L L+ L L+ N + A + S+ LDL +
Sbjct: 132 FDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEG 191
Query: 260 TVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 319
LS+L+ L++A + L L KL L N + + SF+ L L L
Sbjct: 192 AFEGLSNLRYLNLAMCNLREIPN--LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLW 249
Query: 320 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPEC 379
+ ++I + + +L +L ++L+HN L L DL TPL L+ + L N + +
Sbjct: 250 MIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCDI 309
Query: 380 IYVGFNTMDL 389
+++ + D+
Sbjct: 310 LWLSWWIRDM 319
Score = 183 (69.5 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 59/205 (28%), Positives = 100/205 (48%)
Query: 97 VSLLDCTLSNV-TVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLL 155
+ +L + +++ T+ G F L+ L + L I +GAF+ LS L+ L L NN +
Sbjct: 102 LEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSK-LKELWLRNNPI 160
Query: 156 SVVPTSALAPLAPNLDRLDLSH-NQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAP 214
+P+ A + P+L RLDL +L + +F+GLS+L +L+L+ L + L P
Sbjct: 161 ESIPSYAFNRI-PSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPN--LTP 217
Query: 215 LVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAH 274
L+ L L L GN L+ + QGL + L + + + + + L SL +++AH
Sbjct: 218 LIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQ-VIERNAFDNLQSLVEINLAH 276
Query: 275 NQFSSVRRGALAGLDKLTSLSCHHN 299
N + + L L + HHN
Sbjct: 277 NNLTLLPHDLFTPLHHLERIHLHHN 301
Score = 177 (67.4 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 61/234 (26%), Positives = 106/234 (45%)
Query: 166 LAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQG 225
++ N L+L NQ+ ++ SFK L L L LS N + T+ L L L L
Sbjct: 74 ISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFD 133
Query: 226 NRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPS-TVPRLSSLKVLSIAH-NQFSSVRRG 283
NRLT A L + +L L +N + PS R+ SL+ L + + S + G
Sbjct: 134 NRLTTIPNGAFVYLSKLKELWLRNNPIESI--PSYAFNRIPSLRRLDLGELKRLSYISEG 191
Query: 284 ALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLD 343
A GL L L+ ++ E + L L LDL+ N + A+ S L +L L
Sbjct: 192 AFEGLSNLRYLNLA--MCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLW 249
Query: 344 LSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELIYSGVW 397
+ + ++ + ++ L+SL E+ L N++++ P ++ + ++ ++ W
Sbjct: 250 MIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPW 303
Score = 117 (46.2 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 41/134 (30%), Positives = 63/134 (47%)
Query: 251 LLAGPLGPSTVPRLSSLKVLSIAHNQFSSV---RRGALAGLDKLTS----LSCHHNQIDV 303
++AG + T P + S NQFS V R+ D +++ L+ H NQI +
Sbjct: 37 VVAGLVRAQTCPSVCSCS------NQFSKVICVRKNLREVPDGISTNTRLLNLHENQIQI 90
Query: 304 LEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSL 363
++ +SF+ L L L L+ N I + + L+NL TL+L N L + L L
Sbjct: 91 IKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKL 150
Query: 364 QELRLDDNDISMEP 377
+EL L +N I P
Sbjct: 151 KELWLRNNPIESIP 164
Score = 71 (30.1 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L L ++ N S++R G+ GL L L +QI V+E ++F N+
Sbjct: 218 LIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNL 266
Score = 51 (23.0 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 679
L SL +++AHN + + L L + HHN
Sbjct: 266 LQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHN 301
Score = 50 (22.7 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 12/47 (25%), Positives = 21/47 (44%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFS 690
L L+ L + +Q + R A L L ++ HN + +L F+
Sbjct: 242 LMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFT 288
>RGD|1311013 [details] [associations]
symbol:Lrrc4c "leucine rich repeat containing 4C" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0050770 "regulation of axonogenesis" evidence=IEA;ISO]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026878 PROSITE:PS50835 PROSITE:PS51450 RGD:1311013
GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0050770
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
EMBL:CH473949 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:57689 KO:K07523 OMA:WITPNGS
OrthoDB:EOG4XKV6K PANTHER:PTHR24369:SF8 IPI:IPI00207958
RefSeq:NP_001101223.1 UniGene:Rn.219303 SMR:D3ZXT1
Ensembl:ENSRNOT00000044595 GeneID:311236 KEGG:rno:311236
UCSC:RGD:1311013 NextBio:663237 Uniprot:D3ZXT1
Length = 640
Score = 218 (81.8 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 65/250 (26%), Positives = 116/250 (46%)
Query: 140 GLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDL 199
G+S+ + L L N + ++ ++ L +L+ L LS N + +E +F GL++LN L+L
Sbjct: 73 GISTNTRLLNLHENQIQIIKVNSFKHLR-HLEILQLSRNHIRTIEIGAFNGLANLNTLEL 131
Query: 200 SYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPS 259
N+L T+ L L+ L L+ N + A + S+ LDL +
Sbjct: 132 FDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEG 191
Query: 260 TVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 319
LS+L+ L++A + L L KL L N + + SF+ L L L
Sbjct: 192 AFEGLSNLRYLNLAMCNLREIPN--LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLW 249
Query: 320 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPEC 379
+ ++I + + +L +L ++L+HN L L DL TPL L+ + L N + +
Sbjct: 250 MIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCDI 309
Query: 380 IYVGFNTMDL 389
+++ + D+
Sbjct: 310 LWLSWWIRDM 319
Score = 183 (69.5 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 59/205 (28%), Positives = 100/205 (48%)
Query: 97 VSLLDCTLSNV-TVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLL 155
+ +L + +++ T+ G F L+ L + L I +GAF+ LS L+ L L NN +
Sbjct: 102 LEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSK-LKELWLRNNPI 160
Query: 156 SVVPTSALAPLAPNLDRLDLSH-NQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAP 214
+P+ A + P+L RLDL +L + +F+GLS+L +L+L+ L + L P
Sbjct: 161 ESIPSYAFNRI-PSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPN--LTP 217
Query: 215 LVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAH 274
L+ L L L GN L+ + QGL + L + + + + + L SL +++AH
Sbjct: 218 LIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQ-VIERNAFDNLQSLVEINLAH 276
Query: 275 NQFSSVRRGALAGLDKLTSLSCHHN 299
N + + L L + HHN
Sbjct: 277 NNLTLLPHDLFTPLHHLERIHLHHN 301
Score = 177 (67.4 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 61/234 (26%), Positives = 106/234 (45%)
Query: 166 LAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQG 225
++ N L+L NQ+ ++ SFK L L L LS N + T+ L L L L
Sbjct: 74 ISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFD 133
Query: 226 NRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPS-TVPRLSSLKVLSIAH-NQFSSVRRG 283
NRLT A L + +L L +N + PS R+ SL+ L + + S + G
Sbjct: 134 NRLTTIPNGAFVYLSKLKELWLRNNPIESI--PSYAFNRIPSLRRLDLGELKRLSYISEG 191
Query: 284 ALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLD 343
A GL L L+ ++ E + L L LDL+ N + A+ S L +L L
Sbjct: 192 AFEGLSNLRYLNLA--MCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLW 249
Query: 344 LSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELIYSGVW 397
+ + ++ + ++ L+SL E+ L N++++ P ++ + ++ ++ W
Sbjct: 250 MIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPW 303
Score = 117 (46.2 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 41/134 (30%), Positives = 63/134 (47%)
Query: 251 LLAGPLGPSTVPRLSSLKVLSIAHNQFSSV---RRGALAGLDKLTS----LSCHHNQIDV 303
++AG + T P + S NQFS V R+ D +++ L+ H NQI +
Sbjct: 37 VVAGLVRAQTCPSVCSCS------NQFSKVICVRKNLREVPDGISTNTRLLNLHENQIQI 90
Query: 304 LEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSL 363
++ +SF+ L L L L+ N I + + L+NL TL+L N L + L L
Sbjct: 91 IKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKL 150
Query: 364 QELRLDDNDISMEP 377
+EL L +N I P
Sbjct: 151 KELWLRNNPIESIP 164
Score = 71 (30.1 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L L ++ N S++R G+ GL L L +QI V+E ++F N+
Sbjct: 218 LIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNL 266
Score = 51 (23.0 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 679
L SL +++AHN + + L L + HHN
Sbjct: 266 LQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHN 301
Score = 50 (22.7 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 12/47 (25%), Positives = 21/47 (44%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFS 690
L L+ L + +Q + R A L L ++ HN + +L F+
Sbjct: 242 LMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFT 288
>UNIPROTKB|F1SGM5 [details] [associations]
symbol:LGR4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090190 "positive regulation of branching involved in
ureteric bud morphogenesis" evidence=IEA] [GO:0072282 "metanephric
nephron tubule morphogenesis" evidence=IEA] [GO:0072224
"metanephric glomerulus development" evidence=IEA] [GO:0072202
"cell differentiation involved in metanephros development"
evidence=IEA] [GO:0061290 "canonical Wnt receptor signaling pathway
involved in metanephric kidney development" evidence=IEA]
[GO:0050673 "epithelial cell proliferation" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0030539 "male genitalia
development" evidence=IEA] [GO:0016500 "protein-hormone receptor
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021
GO:GO:0045892 GO:GO:0045893 InterPro:IPR003591 SMART:SM00369
GO:GO:0030539 GO:GO:0090190 GO:GO:0050673 GO:GO:0016500
GeneTree:ENSGT00650000092962 GO:GO:0061290 GO:GO:0072282
OMA:DGYWSDC GO:GO:0072202 GO:GO:0072224 EMBL:CU462866 EMBL:CU466955
Ensembl:ENSSSCT00000014563 Uniprot:F1SGM5
Length = 886
Score = 204 (76.9 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 72/240 (30%), Positives = 110/240 (45%)
Query: 104 LSNVTVLP-GKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSA 162
++N+T LP F L L ++ +L I A GL L+ L L NN L VP+ A
Sbjct: 1 MNNITQLPEDAFKNFPFLEELRLAGNDLSFIHPKALSGLKE-LKVLTLQNNQLKTVPSEA 59
Query: 163 LAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLR 222
+ L+ L L L N + + SF+GL+ L L L N L + L+ L TL+ L
Sbjct: 60 IRGLSA-LQSLRLDANHITSVPEDSFEGLTQLRHLWLDDNSLTEVPVQPLSNLPTLQALT 118
Query: 223 LQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRR 282
L N+++ A L S+ L L +N + LG L +L+ L + +N +
Sbjct: 119 LALNKISSIPDFAFTNLSSLVVLHLHNNKIKS-LGQHCFDGLDNLETLDLNYNNLGEFPQ 177
Query: 283 GALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTL 342
A+ L L L H N I V+ D +F L + L N + V ++ +LS+L +L
Sbjct: 178 -AIKALPSLKELLFHSNSISVIPDGAFDGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSL 236
Score = 200 (75.5 bits), Expect = 5.9e-14, Sum P(2) = 5.9e-14
Identities = 71/245 (28%), Positives = 107/245 (43%)
Query: 153 NLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCL 212
N ++ +P A P L+ L L+ N L + + GL L L L N+L T+ + +
Sbjct: 2 NNITQLPEDAFKNF-PFLEELRLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAI 60
Query: 213 APLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAG-PLGPSTVPRLSSLKVLS 271
L L+ LRL N +T + +GL + L L N L P+ P + L +L+ L+
Sbjct: 61 RGLSALQSLRLDANHITSVPEDSFEGLTQLRHLWLDDNSLTEVPVQP--LSNLPTLQALT 118
Query: 272 IAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGA 331
+A N+ SS+ A L L L H+N+I L H F L L LDL +N + A
Sbjct: 119 LALNKISSIPDFAFTNLSSLVVLHLHNNKIKSLGQHCFDGLDNLETLDLNYNNLGEFPQA 178
Query: 332 SLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLE- 390
A L +L L N + + L+ + L DN +S + N DL
Sbjct: 179 IKA-LPSLKELLFHSNSISVIPDGAFDGNPLLRTIHLYDNPLSFVGNSAF--HNLSDLHS 235
Query: 391 LIYSG 395
L+ G
Sbjct: 236 LVIRG 240
Score = 188 (71.2 bits), Expect = 5.8e-10, Sum P(2) = 5.8e-10
Identities = 88/324 (27%), Positives = 137/324 (42%)
Query: 71 TLRCTANKSDLYAISE-SLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGE 129
+LR AN + ++ E S GL + L D +L+ V V P L TL L ++ +
Sbjct: 68 SLRLDANH--ITSVPEDSFEGLTQLRHLWLDDNSLTEVPVQPLSNLP--TLQALTLALNK 123
Query: 130 LKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFK 189
+ +I D AF LSS L L L NN + + L NL+ LDL++N L + + K
Sbjct: 124 ISSIPDFAFTNLSS-LVVLHLHNNKIKSLGQHCFDGL-DNLETLDLNYNNLGEFPQ-AIK 180
Query: 190 GLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSH 249
L SL L N + + LR + L N L+ +A L +DL H
Sbjct: 181 ALPSLKELLFHSNSISVIPDGAFDGNPLLRTIHLYDNPLSFVGNSAFHNL---SDL---H 234
Query: 250 NL-LAGPLGPSTVPRLSS---LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLE 305
+L + G P L+ L+ L++ + SS+ L +L +N I L
Sbjct: 235 SLVIRGASMVQRFPNLTGTVHLESLTLTGTKISSISSNLCQEQKMLRTLDLSYNNIKDLP 294
Query: 306 DHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQE 365
SF L + L N+I + + L++L LDLS N + + L S+
Sbjct: 295 --SFNGCYALEEISLQRNQIHQIKEGTFQGLTSLRILDLSRNLIHEIHDRAFAKLGSITN 352
Query: 366 LRLDDNDISMEPECIYVGFNTMDL 389
L + N+++ P G N + L
Sbjct: 353 LDISFNELTSFPTEGLNGLNQLKL 376
Score = 166 (63.5 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 57/197 (28%), Positives = 95/197 (48%)
Query: 226 NRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGAL 285
N +T A + + +L L+ N L+ + P + L LKVL++ +NQ +V A+
Sbjct: 2 NNITQLPEDAFKNFPFLEELRLAGNDLSF-IHPKALSGLKELKVLTLQNNQLKTVPSEAI 60
Query: 286 AGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLS 345
GL L SL N I + + SF L+ L HL L N + V L++L L L L+
Sbjct: 61 RGLSALQSLRLDANHITSVPEDSFEGLTQLRHLWLDDNSLTEVPVQPLSNLPTLQALTLA 120
Query: 346 HNFLRALTQDLITPLKSLQELRLDDNDI-SMEPECIYVGFNTMD-LELIYS--GVWRHST 401
N + ++ T L SL L L +N I S+ C + G + ++ L+L Y+ G + +
Sbjct: 121 LNKISSIPDFAFTNLSSLVVLHLHNNKIKSLGQHC-FDGLDNLETLDLNYNNLGEFPQAI 179
Query: 402 LLIPVMLSLCTRSSVVT 418
+P + L S+ ++
Sbjct: 180 KALPSLKELLFHSNSIS 196
Score = 164 (62.8 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 67/273 (24%), Positives = 121/273 (44%)
Query: 100 LDCTLSNVTVLPG-KFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVV 158
L L+ ++ +P F +L L + + ++K++ F GL + L+ L L N L
Sbjct: 117 LTLALNKISSIPDFAFTNLSSLVVLHLHNNKIKSLGQHCFDGLDN-LETLDLNYNNLGEF 175
Query: 159 PTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTL 218
P A+ L P+L L N + + + +F G L + L N L + L L
Sbjct: 176 P-QAIKAL-PSLKELLFHSNSISVIPDGAFDGNPLLRTIHLYDNPLSFVGNSAFHNLSDL 233
Query: 219 RVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFS 278
L ++G + V L G + L L+ ++ + + L+ L +++N
Sbjct: 234 HSLVIRGASM-VQRFPNLTGTVHLESLTLTGTKISS-ISSNLCQEQKMLRTLDLSYNNIK 291
Query: 279 SVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSN 338
+ + G L +S NQI +++ +F+ L++L LDL+ N I + + A L +
Sbjct: 292 DLP--SFNGCYALEEISLQRNQIHQIKEGTFQGLTSLRILDLSRNLIHEIHDRAFAKLGS 349
Query: 339 LTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
+T LD+S N L + + L L +L+L N
Sbjct: 350 ITNLDISFNELTSFPTE---GLNGLNQLKLVGN 379
Score = 65 (27.9 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 13/47 (27%), Positives = 23/47 (48%)
Query: 646 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
+L+ +S+ NQ ++ G GL L L N I + D +F+ +
Sbjct: 301 ALEEISLQRNQIHQIKEGTFQGLTSLRILDLSRNLIHEIHDRAFAKL 347
Score = 39 (18.8 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKL 671
L S+ L I+ N+ +S L GL++L
Sbjct: 347 LGSITNLDISFNELTSFPTEGLNGLNQL 374
Score = 37 (18.1 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 503 KNTNCSRPWVSLKQLPWSPKYQVCATLG 530
K ++ +V+L+ L YQ CA G
Sbjct: 383 KEALAAKDFVNLRSLSVPYAYQCCAFWG 410
>FB|FBgn0005775 [details] [associations]
symbol:Con "Connectin" species:7227 "Drosophila melanogaster"
[GO:0044295 "axonal growth cone" evidence=IDA] [GO:0007156
"homophilic cell adhesion" evidence=NAS;IDA;TAS] [GO:0009986 "cell
surface" evidence=IDA] [GO:0031594 "neuromuscular junction"
evidence=IDA] [GO:0007155 "cell adhesion" evidence=NAS] [GO:0016200
"synaptic target attraction" evidence=TAS] [GO:0007413 "axonal
fasciculation" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005886
GO:GO:0009986 EMBL:AE014296 GO:GO:0031225 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0031594 GO:GO:0007413 GO:GO:0007156 GO:GO:0044295 EMBL:M96647
EMBL:X68701 EMBL:AY119518 PIR:A43318 PIR:A49121
RefSeq:NP_001246635.1 RefSeq:NP_523930.3 UniGene:Dm.2557
ProteinModelPortal:Q01819 SMR:Q01819 STRING:Q01819 PaxDb:Q01819
GeneID:38590 KEGG:dme:Dmel_CG7503 UCSC:CG7503-RA CTD:38590
FlyBase:FBgn0005775 InParanoid:Q01819 OrthoDB:EOG49KD5V
GenomeRNAi:38590 NextBio:809410 Bgee:Q01819 GermOnline:CG7503
GO:GO:0016200 Uniprot:Q01819
Length = 682
Score = 218 (81.8 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 64/225 (28%), Positives = 111/225 (49%)
Query: 150 LPNNL-LSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLS 208
+ NN L +PT + PL NL + + ++Q+ +++ +F L L + L+ N +M L
Sbjct: 156 IQNNARLDYIPTMIIEPLK-NLSSIVIEYSQVEIVKSYAFANLPFLERIILNNNHIMALD 214
Query: 209 QDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLK 268
QD A + LR L L+ N++ A + L L L++N ++ L ++ L
Sbjct: 215 QDAFANHIRLRELNLEHNQIFEMDRYAFRNLPLCERLFLNNNNIS-TLHEGLFADMARLT 273
Query: 269 VLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAV 328
L++AHNQ + + GL L L N ++ + D F L +LS L+L NRI +
Sbjct: 274 FLNLAHNQINVLTSEIFRGLGNLNVLKLTRNNLNFIGDTVFAELWSLSELELDDNRIERI 333
Query: 329 SGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 373
S +L L+ L TL+L +N L+ + L+ +L + + N +
Sbjct: 334 SERALDGLNTLKTLNLRNNLLKKIDNGLLRGTPALLSINVQANKL 378
Score = 166 (63.5 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 54/199 (27%), Positives = 89/199 (44%)
Query: 189 KGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLS 248
K L L F+ + +L + + PL L + ++ +++ + A L + + L+
Sbjct: 147 KRLRELKFVIQNNARLDYIPTMIIEPLKNLSSIVIEYSQVEIVKSYAFANLPFLERIILN 206
Query: 249 HNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHS 308
+N + L L+ L++ HNQ + R A L L ++N I L +
Sbjct: 207 NNHIMA-LDQDAFANHIRLRELNLEHNQIFEMDRYAFRNLPLCERLFLNNNNISTLHEGL 265
Query: 309 FRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRL 368
F ++ L+ L+LAHN+I ++ L NL L L+ N L + + L SL EL L
Sbjct: 266 FADMARLTFLNLAHNQINVLTSEIFRGLGNLNVLKLTRNNLNFIGDTVFAELWSLSELEL 325
Query: 369 DDNDISMEPECIYVGFNTM 387
DDN I E G NT+
Sbjct: 326 DDNRIERISERALDGLNTL 344
Score = 162 (62.1 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 55/232 (23%), Positives = 103/232 (44%)
Query: 145 LQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKL 204
L ++ + + + +V + A A L P L+R+ L++N + L+ +F L L+L +N++
Sbjct: 176 LSSIVIEYSQVEIVKSYAFANL-PFLERIILNNNHIMALDQDAFANHIRLRELNLEHNQI 234
Query: 205 MTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRL 264
+ + L L L N ++ + +T L+L+HN + L L
Sbjct: 235 FEMDRYAFRNLPLCERLFLNNNNISTLHEGLFADMARLTFLNLAHNQI-NVLTSEIFRGL 293
Query: 265 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 324
+L VL + N + + A L L+ L N+I+ + + + L+TL L+L +N
Sbjct: 294 GNLNVLKLTRNNLNFIGDTVFAELWSLSELELDDNRIERISERALDGLNTLKTLNLRNNL 353
Query: 325 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPL-----KSLQELRLDDN 371
+ + L L ++++ N L LT P+ S EL + DN
Sbjct: 354 LKKIDNGLLRGTPALLSINVQANKLETLTFYTFQPIMDNLVNSTSELLVSDN 405
>UNIPROTKB|E1C2F8 [details] [associations]
symbol:LGR5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA]
[GO:0048839 "inner ear development" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591
SMART:SM00369 GO:GO:0016500 GeneTree:ENSGT00650000092962
OMA:FNPHFKE EMBL:AADN02009847 IPI:IPI00595522
Ensembl:ENSGALT00000016526 Uniprot:E1C2F8
Length = 834
Score = 210 (79.0 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 73/254 (28%), Positives = 115/254 (45%)
Query: 118 VTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSH 177
V LH + + + ++ F GL S L+ L L N L PT A+ L NL L
Sbjct: 139 VVLH---LHNNRIYSLGKKCFDGLHS-LETLDLNYNSLDEFPT-AIRTLT-NLKELGFHS 192
Query: 178 NQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQ 237
N + + +F G SL + N + + + L LR L L G ++ L
Sbjct: 193 NNIKSIPERAFVGNPSLITIHFYDNPIQLVGKSAFQNLPELRTLTLNGAS-QITEFPDLT 251
Query: 238 GLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCH 297
G S+ L L+ + L S +L +L+VL +++N + KL + H
Sbjct: 252 GTTSLESLTLTGAQITS-LPRSACDQLPNLQVLDLSYNLLEDLP--CFTACKKLQKIDLH 308
Query: 298 HNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLI 357
HN+ID ++ +FR L++L LDLA N+I + + + L +L LD+S N L + +
Sbjct: 309 HNEIDEIKADTFRQLASLRSLDLAWNKIKIIHPNAFSSLPSLIKLDVSSNLLSSFP---V 365
Query: 358 TPLKSLQELRLDDN 371
T L L L+L N
Sbjct: 366 TGLHGLTHLKLTGN 379
Score = 208 (78.3 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 67/206 (32%), Positives = 102/206 (49%)
Query: 178 NQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQ 237
N + KL + L L L L+ N L + + A L +L+VL LQ N+L ALQ
Sbjct: 2 NNITKLPSNPVHNLRFLEELRLAGNGLTYIPKGAFAGLFSLKVLMLQNNQLRQVPTEALQ 61
Query: 238 GLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCH 297
LRS+ L L N + + P+ L SL+ L + N + + A L L +++
Sbjct: 62 NLRSLQSLRLDANHI-NYVPPNCFNGLVSLRHLWLDDNSLTEIPIQAFRSLPALQAMTLA 120
Query: 298 HNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLI 357
N+I + D++F LS+L L L +NRI ++ L +L TLDL++N L +
Sbjct: 121 LNKIHYIPDYAFGNLSSLVVLHLHNNRIYSLGKKCFDGLHSLETLDLNYNSLDEFPTAIR 180
Query: 358 TPLKSLQELRLDDNDISMEPECIYVG 383
T L +L+EL N+I PE +VG
Sbjct: 181 T-LTNLKELGFHSNNIKSIPERAFVG 205
Score = 194 (73.4 bits), Expect = 7.4e-13, Sum P(2) = 7.4e-13
Identities = 72/268 (26%), Positives = 122/268 (45%)
Query: 105 SNVTVLP-GKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSAL 163
+ +T +P G F +L L++ + +L+ + A L S LQ+L L N ++ VP +
Sbjct: 26 NGLTYIPKGAFAGLFSLKVLMLQNNQLRQVPTEALQNLRS-LQSLRLDANHINYVPPNCF 84
Query: 164 APLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRL 223
L +L L L N L ++ +F+ L +L + L+ NK+ + L +L VL L
Sbjct: 85 NGLV-SLRHLWLDDNSLTEIPIQAFRSLPALQAMTLALNKIHYIPDYAFGNLSSLVVLHL 143
Query: 224 QGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRG 283
NR+ GL S+ LDL++N L P+ + L++LK L N S+
Sbjct: 144 HNNRIYSLGKKCFDGLHSLETLDLNYNSLDE--FPTAIRTLTNLKELGFHSNNIKSIPER 201
Query: 284 ALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLD 343
A G L ++ + N I ++ +F+ L L L L + L ++L +L
Sbjct: 202 AFVGNPSLITIHFYDNPIQLVGKSAFQNLPELRTLTL-NGASQITEFPDLTGTTSLESLT 260
Query: 344 LSHNFLRALTQDLITPLKSLQELRLDDN 371
L+ + +L + L +LQ L L N
Sbjct: 261 LTGAQITSLPRSACDQLPNLQVLDLSYN 288
Score = 180 (68.4 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 81/311 (26%), Positives = 140/311 (45%)
Query: 71 TLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGEL 130
+LR AN + Y GL + L D +L+ + + + L L + ++ ++
Sbjct: 68 SLRLDANHIN-YVPPNCFNGLVSLRHLWLDDNSLTEIPIQAFRSLPA--LQAMTLALNKI 124
Query: 131 KNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKG 190
I D AF LSS L L L NN + + L +L+ LDL++N L + T+ +
Sbjct: 125 HYIPDYAFGNLSS-LVVLHLHNNRIYSLGKKCFDGLH-SLETLDLNYNSLDEFP-TAIRT 181
Query: 191 LSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHN 250
L++L L N + ++ + +L + N + + +A Q L + L L+
Sbjct: 182 LTNLKELGFHSNNIKSIPERAFVGNPSLITIHFYDNPIQLVGKSAFQNLPELRTLTLN-- 239
Query: 251 LLAGPLGPSTVPRLS---SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLED- 306
G + P L+ SL+ L++ Q +S+ R A L L L +N +LED
Sbjct: 240 ---GASQITEFPDLTGTTSLESLTLTGAQITSLPRSACDQLPNLQVLDLSYN---LLEDL 293
Query: 307 HSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQEL 366
F A L +DL HN I + + L++L +LDL+ N ++ + + + L SL +L
Sbjct: 294 PCFTACKKLQKIDLHHNEIDEIKADTFRQLASLRSLDLAWNKIKIIHPNAFSSLPSLIKL 353
Query: 367 RLDDNDISMEP 377
+ N +S P
Sbjct: 354 DVSSNLLSSFP 364
Score = 165 (63.1 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 62/224 (27%), Positives = 101/224 (45%)
Query: 153 NLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCL 212
N ++ +P++ + L L+ L L+ N L + +F GL SL L L N+L + + L
Sbjct: 2 NNITKLPSNPVHNLR-FLEELRLAGNGLTYIPKGAFAGLFSLKVLMLQNNQLRQVPTEAL 60
Query: 213 APLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAG-PLGPSTVPRLSSLKVLS 271
L +L+ LRL N + GL S+ L L N L P+ L +L+ ++
Sbjct: 61 QNLRSLQSLRLDANHINYVPPNCFNGLVSLRHLWLDDNSLTEIPI--QAFRSLPALQAMT 118
Query: 272 IAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGA 331
+A N+ + A L L L H+N+I L F L +L LDL +N + A
Sbjct: 119 LALNKIHYIPDYAFGNLSSLVVLHLHNNRIYSLGKKCFDGLHSLETLDLNYNSLDEFPTA 178
Query: 332 SLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISM 375
+ L+NL L N ++++ + SL + DN I +
Sbjct: 179 -IRTLTNLKELGFHSNNIKSIPERAFVGNPSLITIHFYDNPIQL 221
Score = 157 (60.3 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 77/276 (27%), Positives = 119/276 (43%)
Query: 202 NKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTV 261
N + L + + L L LRL GN LT A GL S+ L L +N L + +
Sbjct: 2 NNITKLPSNPVHNLRFLEELRLAGNGLTYIPKGAFAGLFSLKVLMLQNNQLR-QVPTEAL 60
Query: 262 PRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 321
L SL+ L + N + V GL L L N + + +FR+L L + LA
Sbjct: 61 QNLRSLQSLRLDANHINYVPPNCFNGLVSLRHLWLDDNSLTEIPIQAFRSLPALQAMTLA 120
Query: 322 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIY 381
N+I + + +LS+L L L +N + +L + L SL+ L L+ N + P I
Sbjct: 121 LNKIHYIPDYAFGNLSSLVVLHLHNNRIYSLGKKCFDGLHSLETLDLNYNSLDEFPTAIR 180
Query: 382 VGFNTMDLELIYSGVWRHSTLLIPVMLSLCTRSSVVTRYRYC--VVLIEGS---NILDQS 436
N +L G ++ IP + S++T + Y + L+ S N+ +
Sbjct: 181 TLTNLKEL-----GFHSNNIKSIPER-AFVGNPSLITIHFYDNPIQLVGKSAFQNLPELR 234
Query: 437 ALVL-GCSEILALVPTLT-SQPLSYVTSLRANVTGL 470
L L G S+I P LT + L +T A +T L
Sbjct: 235 TLTLNGASQITEF-PDLTGTTSLESLTLTGAQITSL 269
Score = 60 (26.2 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 13/46 (28%), Positives = 24/46 (52%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
L +L+VL +++N + KL + HHN+ID ++ +F
Sbjct: 277 LPNLQVLDLSYNLLEDLP--CFTACKKLQKIDLHHNEIDEIKADTF 320
Score = 57 (25.1 bits), Expect = 4.5e-14, Sum P(2) = 4.5e-14
Identities = 11/46 (23%), Positives = 24/46 (52%)
Query: 647 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L+ + + HN+ ++ L L SL N+I ++ ++FS++
Sbjct: 302 LQKIDLHHNEIDEIKADTFRQLASLRSLDLAWNKIKIIHPNAFSSL 347
>UNIPROTKB|F1PSS7 [details] [associations]
symbol:SLIT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 Pfam:PF12661 Pfam:PF01463 GeneTree:ENSGT00700000104083
OMA:KCVHGKC EMBL:AAEX03015440 Ensembl:ENSCAFT00000014303
Uniprot:F1PSS7
Length = 1534
Score = 159 (61.0 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 82/343 (23%), Positives = 140/343 (40%)
Query: 67 DLPH-TLRCTANKSDLYAISES-LRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLV 124
++P T R N +++ I ++ GL+ + L++ + V G F + L L
Sbjct: 58 NIPRSTERLELNGNNITRIHKNDFVGLKQLRVLQLMENQIG--VVERGAFDDMKELERLR 115
Query: 125 ISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLE 184
++ +L + + F + L L L N + +P A A +L L L NQ+ +E
Sbjct: 116 LNRNQLHTLPELLFQN-NQALSRLDLSENTIQAIPRKAFRG-ATDLKNLQLDKNQISCIE 173
Query: 185 NTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSV-VAAL-QGLRSV 242
+F+ L L L L+ N + T+ + LR RL N L +A L Q LR
Sbjct: 174 EGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQR 233
Query: 243 TDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLT--------SL 294
+ L +GP L L V + ++FS +G + T
Sbjct: 234 PTIGL-FTQCSGPAS------LRGLNVAEVQKSEFSCSGQGEAGRVPSCTLSSGSCPAMC 286
Query: 295 SCHHNQIDVLEDHSFRAL-----STLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFL 349
SC + +D A+ T++ + L N I ++ + + L +DLS+N +
Sbjct: 287 SCSNGIVDC-RGKGLTAIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQI 345
Query: 350 RALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELI 392
+ D L+SL L L N I+ P ++ G T+ L L+
Sbjct: 346 AEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLL 388
Score = 153 (58.9 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 43/137 (31%), Positives = 70/137 (51%)
Query: 141 LSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLS 200
L + + L N + +P A +P L R+DLS+NQ+ ++ +F+GL SLN L L
Sbjct: 307 LPETMTEIRLELNGIKSIPPGAFSPYR-KLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLY 365
Query: 201 YNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPST 260
NK+ L + L TL++L L N++ A Q L++++ L L N + L T
Sbjct: 366 GNKITDLPRGVFGGLYTLQLLLLNANKINCVRPDAFQDLQNLSLLSLYDNKIQS-LAKGT 424
Query: 261 VPRLSSLKVLSIAHNQF 277
L +++ L +A N F
Sbjct: 425 FTSLRAIQTLHLAQNPF 441
Score = 150 (57.9 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 92/349 (26%), Positives = 145/349 (41%)
Query: 61 NDLCACDL--PHTLRCTANKSDLYAISESLRGLEPDERV--SLLDCTLSN--VTVLP--G 112
N C D PH RC A+ ++ SL+ + ER+ S + L+N +++L G
Sbjct: 504 NSECNSDAVCPHKCRCEASLAEC----SSLKLTKIPERIPQSTAELRLNNNEISILEATG 559
Query: 113 KFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDR 172
F + L + +S+ ++ I DGAF G +S + L L N L + + L L
Sbjct: 560 IFKKLTHLKKINLSNNKVSEIEDGAFEGAAS-VSELHLTANQLESIRSGMFRGL-DGLRT 617
Query: 173 LDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSV 232
L L +N++ + N SF GL ++ L L N++ T+S L L L L N +
Sbjct: 618 LMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALSTLNLLANPFNCNC 677
Query: 233 VAALQG--LRS---VTDLDLSHN---LLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGA 284
A G LR VT N L PL P + + S + R
Sbjct: 678 QLAWLGDWLRRRKIVTGNPRCQNPDFLRQIPLQDVAFPDFRCEE----GQEEGSCLPRPQ 733
Query: 285 L----AGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLT 340
A LD T + C + + VL + ++ L +LD N+ V G L+ L
Sbjct: 734 CPQECACLD--TVVRCSNKHLHVLPKGIPKNVTEL-YLD--GNQFTLVPG-QLSTFKYLQ 787
Query: 341 TLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDL 389
+DLS+N + +L+ T + L L L N + P + G ++ L
Sbjct: 788 LVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRL 836
Score = 136 (52.9 bits), Expect = 7.1e-13, Sum P(3) = 7.1e-13
Identities = 46/174 (26%), Positives = 84/174 (48%)
Query: 100 LDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVP 159
+DC + + +P K + T L ++ + I F+GL L+ L L N + VV
Sbjct: 45 VDCHGAGLQAIP-KNIPRST-ERLELNGNNITRIHKNDFVGLKQ-LRVLQLMENQIGVVE 101
Query: 160 TSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLR 219
A + L+RL L+ NQL+ L F+ +L+ LDLS N + + + L+
Sbjct: 102 RGAFDDMK-ELERLRLNRNQLHTLPELLFQNNQALSRLDLSENTIQAIPRKAFRGATDLK 160
Query: 220 VLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAG-PLGP-STVPRLSSLKVLS 271
L+L N+++ A + LR + L L++N + P+ + +P+L + ++ S
Sbjct: 161 NLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHS 214
Score = 128 (50.1 bits), Expect = 2.3e-14, Sum P(3) = 2.3e-14
Identities = 43/152 (28%), Positives = 73/152 (48%)
Query: 220 VLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSS 279
++ +G LT ++ A L ++T++ L N + + P L+ + +++NQ +
Sbjct: 292 IVDCRGKGLT-AIPANLP--ETMTEIRLELNGIKS-IPPGAFSPYRKLRRIDLSNNQIAE 347
Query: 280 VRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNL 339
+ A GL L SL + N+I L F L TL L L N+I V + L NL
Sbjct: 348 IAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCVRPDAFQDLQNL 407
Query: 340 TTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
+ L L N +++L + T L+++Q L L N
Sbjct: 408 SLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQN 439
Score = 119 (46.9 bits), Expect = 2.3e-14, Sum P(3) = 2.3e-14
Identities = 50/191 (26%), Positives = 82/191 (42%)
Query: 63 LCACDLPHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVT-LH 121
LC C T+ C + + L AI +++ ER+ L +N+T + G+ L
Sbjct: 37 LCTCT-GATVDC--HGAGLQAIPKNIP--RSTERLELNG---NNITRIHKNDFVGLKQLR 88
Query: 122 GLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLY 181
L + ++ + GAF + L+ L L N L +P L L RLDLS N +
Sbjct: 89 VLQLMENQIGVVERGAFDDMKE-LERLRLNRNQLHTLP-ELLFQNNQALSRLDLSENTIQ 146
Query: 182 KLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRS 241
+ +F+G + L L L N++ + + L L VL L N +T V++ +
Sbjct: 147 AIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPK 206
Query: 242 VTDLDLSHNLL 252
+ L N L
Sbjct: 207 LRTFRLHSNHL 217
Score = 119 (46.9 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 37/128 (28%), Positives = 59/128 (46%)
Query: 199 LSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGP 258
L N + ++ +P LR + L N++ A QGLRS+ L L N + L
Sbjct: 316 LELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITD-LPR 374
Query: 259 STVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHL 318
L +L++L + N+ + VR A L L+ LS + N+I L +F +L + L
Sbjct: 375 GVFGGLYTLQLLLLNANKINCVRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTL 434
Query: 319 DLAHNRIV 326
LA N +
Sbjct: 435 HLAQNPFI 442
Score = 119 (46.9 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 74/292 (25%), Positives = 122/292 (41%)
Query: 114 FLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRL 173
F L L +S ++ I AF G ++ L+ L L N +S + A L L+ L
Sbjct: 129 FQNNQALSRLDLSENTIQAIPRKAFRG-ATDLKNLQLDKNQISCIEEGAFRALR-GLEVL 186
Query: 174 DLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDC-LAPLVT-LRVLRLQGNRLTVS 231
L++N + + +SF + L L N L DC LA L LR G S
Sbjct: 187 TLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFC---DCHLAWLSQWLRQRPTIGLFTQCS 243
Query: 232 VVAALQGLRSVTDLDLSHNLLAGPLGPSTVPR--LSS--LKVLSIAHNQFSSVRRGALAG 287
A+L+GL +V ++ S +G VP LSS + N R L
Sbjct: 244 GPASLRGL-NVAEVQKSEFSCSGQGEAGRVPSCTLSSGSCPAMCSCSNGIVDCRGKGLTA 302
Query: 288 L-----DKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTL 342
+ + +T + N I + +F L +DL++N+I ++ + L +L +L
Sbjct: 303 IPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSL 362
Query: 343 DLSHNFLRALTQDLITPLKSLQELRLDDNDIS-MEPECIYVGFNTMDLELIY 393
L N + L + + L +LQ L L+ N I+ + P+ + + L +Y
Sbjct: 363 VLYGNKITDLPRGVFGGLYTLQLLLLNANKINCVRPDA-FQDLQNLSLLSLY 413
Score = 115 (45.5 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 36/105 (34%), Positives = 57/105 (54%)
Query: 287 GLDK-LTSLSCHHNQIDVLEDHSFRALSTLSHL---DLAHNRIVAVSGASLAHLSNLTTL 342
G+ K +T L NQ ++ LST +L DL++N+I ++S +S ++S LTTL
Sbjct: 758 GIPKNVTELYLDGNQFTLVPGQ----LSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTL 813
Query: 343 DLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTM 387
LS+N L+ + L+SL+ L L NDIS E I+ ++
Sbjct: 814 ILSYNALQCIPPLAFQGLRSLRLLSLHGNDISTLREGIFTDVTSL 858
Score = 100 (40.3 bits), Expect = 6.5e-12, Sum P(2) = 6.5e-12
Identities = 31/116 (26%), Positives = 56/116 (48%)
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 317
P +P+ ++ L + NQF+ V G L+ L + +N+I L + SF +S L+
Sbjct: 756 PKGIPK--NVTELYLDGNQFTLVP-GQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTT 812
Query: 318 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 373
L L++N + + + L +L L L N + L + + T + SL L + N +
Sbjct: 813 LILSYNALQCIPPLAFQGLRSLRLLSLHGNDISTLREGIFTDVTSLSHLAIGANPL 868
Score = 96 (38.9 bits), Expect = 7.1e-13, Sum P(3) = 7.1e-13
Identities = 31/116 (26%), Positives = 53/116 (45%)
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 317
P+ +P ++ + + N S+ GA + KL + +NQI + +F+ L +L+
Sbjct: 304 PANLPE--TMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNS 361
Query: 318 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 373
L L N+I + L L L L+ N + + D L++L L L DN I
Sbjct: 362 LVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCVRPDAFQDLQNLSLLSLYDNKI 417
Score = 90 (36.7 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 24/101 (23%), Positives = 51/101 (50%)
Query: 294 LSCHHNQIDVLEDHS-FRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRAL 352
L ++N+I +LE F+ L+ L ++L++N++ + + ++++ L L+ N L ++
Sbjct: 545 LRLNNNEISILEATGIFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESI 604
Query: 353 TQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELIY 393
+ L L+ L L +N IS + G + L +Y
Sbjct: 605 RSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLY 645
Score = 78 (32.5 bits), Expect = 2.3e-14, Sum P(3) = 2.3e-14
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 645 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
+S+ L + NQ S+R G GLD L +L +N+I + + SF+ +
Sbjct: 589 ASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGL 636
Score = 74 (31.1 bits), Expect = 6.0e-14, Sum P(3) = 6.0e-14
Identities = 20/79 (25%), Positives = 40/79 (50%)
Query: 618 VAQQEDDINRNNSDSRYVKLQATTIL--LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLS 675
+ Q ++ NN++ L+AT I L+ LK +++++N+ S + GA G ++ L
Sbjct: 538 IPQSTAELRLNNNEISI--LEATGIFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELH 595
Query: 676 CHHNQIDVLEDHSFSNVIG 694
NQ++ + F + G
Sbjct: 596 LTANQLESIRSGMFRGLDG 614
Score = 64 (27.6 bits), Expect = 6.2e-13, Sum P(3) = 6.2e-13
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
+S L L +++N + A GL L LS H N I L + F++V
Sbjct: 807 MSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDISTLREGIFTDV 855
Score = 62 (26.9 bits), Expect = 9.9e-13, Sum P(3) = 9.9e-13
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L+ L + +N+ S + + GL + LS + NQI + +F +
Sbjct: 612 LDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTL 660
Score = 58 (25.5 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 15/49 (30%), Positives = 28/49 (57%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L +L++L + N+ + VR A L L+ LS + N+I L +F+++
Sbjct: 380 LYTLQLLLLNANKINCVRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSL 428
Score = 53 (23.7 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L SL L + N+ + + RG GL L L + N+I+ + +F ++
Sbjct: 356 LRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCVRPDAFQDL 404
Score = 52 (23.4 bits), Expect = 1.0e-11, Sum P(3) = 1.0e-11
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
L SL++LS+ N S++R G + L+ L+ N +
Sbjct: 831 LRSLRLLSLHGNDISTLREGIFTDVTSLSHLAIGANPL 868
Score = 51 (23.0 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 647 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
L+ + +++NQ + + A GL L SL + N+I
Sbjct: 335 LRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKI 369
Score = 48 (22.0 bits), Expect = 2.6e-11, Sum P(3) = 2.6e-11
Identities = 10/32 (31%), Positives = 21/32 (65%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLS 675
L ++++LS+ NQ +++ GA L L++L+
Sbjct: 636 LRNVRLLSLYDNQIATISPGAFDTLQALSTLN 667
Score = 46 (21.3 bits), Expect = 4.1e-11, Sum P(3) = 4.1e-11
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 655 NQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
NQF+ V G L+ L + +N+I L + SF+N+
Sbjct: 771 NQFTLVP-GQLSTFKYLQLVDLSNNKISSLSNSSFTNM 807
Score = 39 (18.8 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 10/38 (26%), Positives = 17/38 (44%)
Query: 655 NQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
N S+ GA + KL + +NQI + +F +
Sbjct: 319 NGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGL 356
>ZFIN|ZDB-GENE-061103-397 [details] [associations]
symbol:zgc:153913 "zgc:153913" species:7955 "Danio
rerio" [GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001611
PROSITE:PS51450 ZFIN:ZDB-GENE-061103-397 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 SMART:SM00013 KO:K13023
GeneTree:ENSGT00700000104286 EMBL:CABZ01111922 EMBL:BC125910
IPI:IPI00613175 RefSeq:NP_001073448.1 UniGene:Dr.152360
Ensembl:ENSDART00000092924 GeneID:559700 KEGG:dre:559700
HOGENOM:HOG000205740 InParanoid:A0JMK3 OMA:CKVDKCS
OrthoDB:EOG4P8FJC NextBio:20883092 Uniprot:A0JMK3
Length = 496
Score = 215 (80.7 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 81/262 (30%), Positives = 123/262 (46%)
Query: 123 LVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLY- 181
+V++SG + ++ +F + L L N +L V A L L L++S N +
Sbjct: 55 IVVASG-IPDLDQQSFPE-TLRLSKLVFLNGMLKSVSGEAFERLV-ELRELEISGNICWM 111
Query: 182 KLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRS 241
L+ +F L++L L L+ NKL + L L +L+L+GN L+ Q L
Sbjct: 112 SLDIQTFSSLTNLTRLLLNNNKLSGVDAGLFHSLHQLEMLQLRGNGLSFLSGRLFQRLHR 171
Query: 242 VTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 301
+ +LDLS N ++ L S L+VLS+ N+ ++ G LD L L+ N I
Sbjct: 172 LQELDLSFNQISS-LSTELFQNNSELRVLSLQANKIPNLPDGIFTHLDHLQELNLRSNLI 230
Query: 302 DVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLK 361
VL SF A +L L L N + ++ A L +T LDLS N L + DL L
Sbjct: 231 RVLTPGSFPA--SLKTLILKKNLLEKLTNAVFHTLHYITYLDLSQNSLTEVPADLFQNLI 288
Query: 362 SLQELRLDDNDISMEPECIYVG 383
SL+ L L +N IS ++ G
Sbjct: 289 SLETLDLSENRISTLAGSVFKG 310
Score = 202 (76.2 bits), Expect = 6.6e-13, P = 6.6e-13
Identities = 74/256 (28%), Positives = 115/256 (44%)
Query: 138 FIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFL 197
F L++ L L L NN LS V L L+ L L N L L F+ L L L
Sbjct: 118 FSSLTN-LTRLLLNNNKLSGVDAGLFHSLH-QLEMLQLRGNGLSFLSGRLFQRLHRLQEL 175
Query: 198 DLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLG 257
DLS+N++ +LS + LRVL LQ N++ L + +L+L NL+ L
Sbjct: 176 DLSFNQISSLSTELFQNNSELRVLSLQANKIPNLPDGIFTHLDHLQELNLRSNLIR-VLT 234
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 317
P + P +SLK L + N + L +T L N + + F+ L +L
Sbjct: 235 PGSFP--ASLKTLILKKNLLEKLTNAVFHTLHYITYLDLSQNSLTEVPADLFQNLISLET 292
Query: 318 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEP 377
LDL+ NRI ++G+ L ++ ++ L N L ++ L+ LQ L L +N + P
Sbjct: 293 LDLSENRISTLAGSVFKGLFSIKSVYLQKNSLISVDAHLLKDQHDLQLLDLSNNSLRSIP 352
Query: 378 ECIYVGFNTMDLELIY 393
F +D + ++
Sbjct: 353 SGF---FEDLDFQCVF 365
Score = 176 (67.0 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 57/195 (29%), Positives = 91/195 (46%)
Query: 96 RVSLLDCTLSNVTVLPGK-FLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNL 154
R+ LD + + ++ L + F L L + + ++ N+ DG F L LQ L L +NL
Sbjct: 171 RLQELDLSFNQISSLSTELFQNNSELRVLSLQANKIPNLPDGIFTHLDH-LQELNLRSNL 229
Query: 155 LSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAP 214
+ V+ T P + L L L N L KL N F L + +LDLS N L + D
Sbjct: 230 IRVL-TPGSFPAS--LKTLILKKNLLEKLTNAVFHTLHYITYLDLSQNSLTEVPADLFQN 286
Query: 215 LVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAH 274
L++L L L NR++ + +GL S+ + L N L + + L++L +++
Sbjct: 287 LISLETLDLSENRISTLAGSVFKGLFSIKSVYLQKNSLIS-VDAHLLKDQHDLQLLDLSN 345
Query: 275 NQFSSVRRGALAGLD 289
N S+ G LD
Sbjct: 346 NSLRSIPSGFFEDLD 360
Score = 144 (55.7 bits), Expect = 9.9e-06, Sum P(2) = 9.9e-06
Identities = 53/177 (29%), Positives = 80/177 (45%)
Query: 217 TLRVLRLQG-NRLTVSVVA-ALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAH 274
TLR+ +L N + SV A + L + +L++S N+ L T L++L L + +
Sbjct: 72 TLRLSKLVFLNGMLKSVSGEAFERLVELRELEISGNICWMSLDIQTFSSLTNLTRLLLNN 131
Query: 275 NQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLA 334
N+ S V G L +L L N + L F+ L L LDL+ N+I ++S
Sbjct: 132 NKLSGVDAGLFHSLHQLEMLQLRGNGLSFLSGRLFQRLHRLQELDLSFNQISSLSTELFQ 191
Query: 335 HLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS-MEPECIYVGFNTMDLE 390
+ S L L L N + L + T L LQEL L N I + P T+ L+
Sbjct: 192 NNSELRVLSLQANKIPNLPDGIFTHLDHLQELNLRSNLIRVLTPGSFPASLKTLILK 248
Score = 130 (50.8 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 54/203 (26%), Positives = 85/203 (41%)
Query: 145 LQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKL 204
LQ L L N +S + T L L L L N++ L + F L L L+L N +
Sbjct: 172 LQELDLSFNQISSLSTE-LFQNNSELRVLSLQANKIPNLPDGIFTHLDHLQELNLRSNLI 230
Query: 205 MTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRL 264
L+ P +L+ L L+ N L A L +T LDLS N L + L
Sbjct: 231 RVLTPGSF-P-ASLKTLILKKNLLEKLTNAVFHTLHYITYLDLSQNSLT-EVPADLFQNL 287
Query: 265 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 324
SL+ L ++ N+ S++ GL + S+ N + ++ H + L LDL++N
Sbjct: 288 ISLETLDLSENRISTLAGSVFKGLFSIKSVYLQKNSLISVDAHLLKDQHDLQLLDLSNNS 347
Query: 325 IVAVSGASLAHLSNLTTLDLSHN 347
+ ++ L +L N
Sbjct: 348 LRSIPSGFFEDLDFQCVFELRGN 370
Score = 37 (18.1 bits), Expect = 9.9e-06, Sum P(2) = 9.9e-06
Identities = 11/49 (22%), Positives = 18/49 (36%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L + L ++ N + V L L +L N+I L F +
Sbjct: 263 LHYITYLDLSQNSLTEVPADLFQNLISLETLDLSENRISTLAGSVFKGL 311
>RGD|69311 [details] [associations]
symbol:Slit3 "slit homolog 3 (Drosophila)" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=IEA;ISO] [GO:0007411 "axon guidance" evidence=ISO]
[GO:0007420 "brain development" evidence=IEP] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA;ISO] [GO:0009887
"organ morphogenesis" evidence=IEA;ISO] [GO:0010629 "negative
regulation of gene expression" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0021510 "spinal cord development"
evidence=IEP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA;ISO]
[GO:0032870 "cellular response to hormone stimulus"
evidence=IEA;ISO] [GO:0035385 "Roundabout signaling pathway"
evidence=IEA;ISO] [GO:0048495 "Roundabout binding" evidence=IEA;ISO]
[GO:0048846 "axon extension involved in axon guidance"
evidence=IEA;ISO] [GO:0050919 "negative chemotaxis"
evidence=IEA;ISO] [GO:0051414 "response to cortisol stimulus"
evidence=IEA;ISO] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA;ISO] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA;ISO] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0021834 "chemorepulsion involved
in embryonic olfactory bulb interneuron precursor migration"
evidence=ISO] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:69311 GO:GO:0008285 GO:GO:0005615
GO:GO:0007420 GO:GO:0016020 GO:GO:0030308 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887
PROSITE:PS01186 GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791
SMART:SM00282 PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
GO:GO:0070100 Pfam:PF12661 Pfam:PF01463 GO:GO:0051414 GO:GO:0050919
GO:GO:0035385 GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T CTD:6586 KO:K06850 EMBL:AB011531 IPI:IPI00207574
PIR:T13953 RefSeq:NP_112611.1 UniGene:Rn.12298
ProteinModelPortal:O88280 SMR:O88280 IntAct:O88280 STRING:O88280
PRIDE:O88280 GeneID:83467 KEGG:rno:83467 UCSC:RGD:69311
InParanoid:O88280 NextBio:615863 ArrayExpress:O88280
Genevestigator:O88280 GermOnline:ENSRNOG00000007377 Uniprot:O88280
Length = 1523
Score = 167 (63.8 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 51/156 (32%), Positives = 78/156 (50%)
Query: 197 LDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHN---LLA 253
LDL N + +++ L LRVL L+ N+++V A Q L+ + L L+ N +L
Sbjct: 66 LDLDRNNITRITKMDFTGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLP 125
Query: 254 GPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALS 313
L ST P+L+ L ++ NQ + R A G+ + +L +N I +ED +FRAL
Sbjct: 126 ELLFQST-PKLTRL---DLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALR 181
Query: 314 TLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFL 349
L L L +N I + S H+ + TL L N L
Sbjct: 182 DLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHL 217
Score = 160 (61.4 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 49/170 (28%), Positives = 76/170 (44%)
Query: 169 NLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRL 228
N +RLDL N + ++ F GL +L L L N++ + + L L LRL N+L
Sbjct: 62 NAERLDLDRNNITRITKMDFTGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKL 121
Query: 229 TVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGL 288
V Q +T LDLS N + G + ++ +K L + +N S + GA L
Sbjct: 122 QVLPELLFQSTPKLTRLDLSENQIQG-IPRKAFRGVTGVKNLQLDNNHISCIEDGAFRAL 180
Query: 289 DKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSN 338
L L+ ++N I + SF + + L L N + LA LS+
Sbjct: 181 RDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYC--DCHLAWLSD 228
Score = 153 (58.9 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 82/312 (26%), Positives = 129/312 (41%)
Query: 84 ISESLRGLEPDERVSL--LDCTLSNVTVLP-GKFLEGVTLHGLVISSGELKNISDGAFIG 140
I+E +GL D VSL L + + L F + L+ L + +L+ IS G F
Sbjct: 367 ITEIPKGLF-DGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAP 425
Query: 141 LSSPLQALGLPNN-LLSVVPTSALAP-LAPN-LDRLDLSHNQLYKLENTSFKGLSSLNF- 196
L S +Q L L N + LA L N ++ + +L N + S F
Sbjct: 426 LQS-IQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFR 484
Query: 197 LDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRS-----VTDLDLSHNL 251
S + S +C LV R +G + S L + S TDL L+ N
Sbjct: 485 CSGSEDYRNRFSSECFMDLVCPEKCRCEGTIVDCSN-QKLSRIPSHLPEYTTDLRLNDND 543
Query: 252 LAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRA 311
+A +L +L+ +++++N+ VR GA G + L NQ++ + FR
Sbjct: 544 IAVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRG 603
Query: 312 LSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
LS L L L N I V+ + A LS++ L L N + ++ T L SL + L N
Sbjct: 604 LSGLKTLMLRSNLISCVNNDTFAGLSSVRLLSLYDNRITTISPGAFTTLVSLSTINLLSN 663
Query: 372 DISMEPECIYVG 383
+ ++G
Sbjct: 664 PFNCNCHMAWLG 675
Score = 152 (58.6 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 43/155 (27%), Positives = 76/155 (49%)
Query: 234 AALQGL-RSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLT 292
A +G+ R+ LDL N + + L +L+VL + NQ S + RGA L +L
Sbjct: 54 AVPRGIPRNAERLDLDRNNITR-ITKMDFTGLKNLRVLHLEDNQVSVIERGAFQDLKQLE 112
Query: 293 SLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRAL 352
L + N++ VL + F++ L+ LDL+ N+I + + ++ + L L +N + +
Sbjct: 113 RLRLNKNKLQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCI 172
Query: 353 TQDLITPLKSLQELRLDDNDISMEPECIYVGFNTM 387
L+ L+ L L++N+IS + FN M
Sbjct: 173 EDGAFRALRDLEILTLNNNNIS---RILVTSFNHM 204
Score = 151 (58.2 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 84/314 (26%), Positives = 135/314 (42%)
Query: 89 RGLEPD-ERVSLLDCTLSNVTVLPGKFLEGVT-LHGLVISSGELKNISDGAFIGLSSPLQ 146
RG D +++ L + + VLP + L L +S +++ I AF G++ ++
Sbjct: 102 RGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTG-VK 160
Query: 147 ALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMT 206
L L NN +S + A L +L+ L L++N + ++ TSF + + L L N L
Sbjct: 161 NLQLDNNHISCIEDGAFRALR-DLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYC 219
Query: 207 LSQDC-LAPLVT-LRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRL 264
DC LA L LR R G L+G SV D+ + GP +
Sbjct: 220 ---DCHLAWLSDWLRQRRTIGQFTLCMAPVHLRGF-SVADVQKKEYVCPGPHSEAPACNA 275
Query: 265 SSLKVLSIAH--NQFSSVRRGAL----AGLDK-LTSLSCHHNQIDVLEDHSFRALSTLSH 317
+SL S N R L A L + + + N I + +F L
Sbjct: 276 NSLSCPSACSCSNNIVDCRGKGLTEIPANLPEGIVEIRLEQNSIKSIPAGAFIQYKKLKR 335
Query: 318 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEP 377
+D++ N+I ++ + L +LT+L L N + + + L L SLQ L L+ N I+
Sbjct: 336 IDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKIN--- 392
Query: 378 ECIYVGFNTM-DLE 390
C+ V NT DL+
Sbjct: 393 -CLRV--NTFQDLQ 403
Score = 150 (57.9 bits), Expect = 2.8e-14, Sum P(3) = 2.8e-14
Identities = 53/191 (27%), Positives = 82/191 (42%)
Query: 65 ACDLPHTLRCTANKSDLYAISESL--RGLEPDERVSLLDCTLSNVTVLPGKFLEGV-TLH 121
AC P C+A D + + RG+ P LD +N+T + G+ L
Sbjct: 33 AC--PTKCTCSAASVDCHGLGLRAVPRGI-P-RNAERLDLDRNNITRITKMDFTGLKNLR 88
Query: 122 GLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLY 181
L + ++ I GAF L L+ L L N L V+P L P L RLDLS NQ+
Sbjct: 89 VLHLEDNQVSVIERGAFQDLKQ-LERLRLNKNKLQVLP-ELLFQSTPKLTRLDLSENQIQ 146
Query: 182 KLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRS 241
+ +F+G++ + L L N + + L L +L L N ++ +V + +
Sbjct: 147 GIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMPK 206
Query: 242 VTDLDLSHNLL 252
+ L L N L
Sbjct: 207 IRTLRLHSNHL 217
Score = 137 (53.3 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
Identities = 46/153 (30%), Positives = 71/153 (46%)
Query: 220 VLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAG-PLGPSTVPRLSSLKVLSIAHNQFS 278
++ +G LT + A L + ++ L N + P G + LK + I+ NQ S
Sbjct: 290 IVDCRGKGLT-EIPANLP--EGIVEIRLEQNSIKSIPAGAFI--QYKKLKRIDISKNQIS 344
Query: 279 SVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSN 338
+ A GL LTSL + N+I + F L +L L L N+I + + L N
Sbjct: 345 DIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQN 404
Query: 339 LTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
L L L N L+ +++ L PL+S+Q L L N
Sbjct: 405 LNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQN 437
Score = 131 (51.2 bits), Expect = 2.6e-09, Sum P(3) = 2.6e-09
Identities = 38/128 (29%), Positives = 61/128 (47%)
Query: 150 LPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQ 209
L N + +P A L R+D+S NQ+ + +F+GL SL L L NK+ + +
Sbjct: 314 LEQNSIKSIPAGAFIQYK-KLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPK 372
Query: 210 DCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKV 269
LV+L++L L N++ V Q L+++ L L N L + L S++
Sbjct: 373 GLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQ-TISKGLFAPLQSIQT 431
Query: 270 LSIAHNQF 277
L +A N F
Sbjct: 432 LHLAQNPF 439
Score = 130 (50.8 bits), Expect = 0.00022, P = 0.00022
Identities = 37/103 (35%), Positives = 55/103 (53%)
Query: 221 LRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSV 280
L L+GN LT +V L R +T +DLS+N ++ L T +S L L +++N+ +
Sbjct: 757 LYLEGNHLT-AVPKELSTFRQLTLIDLSNNSIS-MLTNHTFSNMSHLSTLILSYNRLRCI 814
Query: 281 RRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 323
A GL L L+ H N I + + SF L++LSHL L N
Sbjct: 815 PVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGIN 857
Score = 127 (49.8 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 68/299 (22%), Positives = 123/299 (41%)
Query: 105 SNVTVLP-GKFLEGVTLHGLVISSGELKNISDGAFIGLSSP-LQALGLPNNLLSVVPTSA 162
+ V+V+ G F + L L ++ +L+ + + F S+P L L L N + +P A
Sbjct: 95 NQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLF--QSTPKLTRLDLSENQIQGIPRKA 152
Query: 163 LAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLR 222
+ + L L +N + +E+ +F+ L L L L+ N + + + +R LR
Sbjct: 153 FRGVT-GVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMPKIRTLR 211
Query: 223 LQGNRLTVSV-VAALQG-LRSVTDLDLSHNLLAGPL---GPSTVPRLSSLKVLSIAHNQF 277
L N L +A L LR + L P+ G S V H++
Sbjct: 212 LHSNHLYCDCHLAWLSDWLRQRRTIG-QFTLCMAPVHLRGFSVADVQKKEYVCPGPHSEA 270
Query: 278 SSVRRGALAGLDKLTSLSCHHNQIDV----LEDHSFRALSTLSHLDLAHNRIVAVSGASL 333
+ +L+ ++ SC +N +D L + + + L N I ++ +
Sbjct: 271 PACNANSLSCP---SACSCSNNIVDCRGKGLTEIPANLPEGIVEIRLEQNSIKSIPAGAF 327
Query: 334 AHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELI 392
L +D+S N + + D LKSL L L N I+ P+ ++ G ++ L L+
Sbjct: 328 IQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLL 386
Score = 114 (45.2 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 35/95 (36%), Positives = 55/95 (57%)
Query: 287 GLDK-LTSLSCHHNQIDVL--EDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLD 343
G+ K +T L N + + E +FR L TL +DL++N I ++ + +++S+L+TL
Sbjct: 749 GMPKDVTELYLEGNHLTAVPKELSTFRQL-TL--IDLSNNSISMLTNHTFSNMSHLSTLI 805
Query: 344 LSHNFLRALTQDLITPLKSLQELRLDDNDISMEPE 378
LS+N LR + L+SL+ L L NDIS PE
Sbjct: 806 LSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPE 840
Score = 99 (39.9 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 31/116 (26%), Positives = 57/116 (49%)
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 317
P +P+ + L + N ++V + L+ +LT + +N I +L +H+F +S LS
Sbjct: 747 PKGMPK--DVTELYLEGNHLTAVPK-ELSTFRQLTLIDLSNNSISMLTNHTFSNMSHLST 803
Query: 318 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 373
L L++NR+ + + L +L L L N + ++ + L SL L L N +
Sbjct: 804 LILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGINPL 859
Score = 96 (38.9 bits), Expect = 2.8e-14, Sum P(3) = 2.8e-14
Identities = 30/116 (25%), Positives = 51/116 (43%)
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 317
P+ +P + + + N S+ GA KL + NQI + +F+ L +L+
Sbjct: 302 PANLPE--GIVEIRLEQNSIKSIPAGAFIQYKKLKRIDISKNQISDIAPDAFQGLKSLTS 359
Query: 318 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 373
L L N+I + L +L L L+ N + L + L++L L L DN +
Sbjct: 360 LVLYGNKITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKL 415
Score = 85 (35.0 bits), Expect = 2.5e-11, Sum P(3) = 2.5e-11
Identities = 33/126 (26%), Positives = 57/126 (45%)
Query: 292 TSLSCHHNQIDVLEDHS-FRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLR 350
T L + N I VLE F+ L L ++L++NRI V + + + L L+ N L
Sbjct: 535 TDLRLNDNDIAVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLE 594
Query: 351 ALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELIYSGVWRHSTLLIPVMLSL 410
+ + L L+ L L N IS + G +++ L +Y R +T+ +L
Sbjct: 595 TMHGRMFRGLSGLKTLMLRSNLISCVNNDTFAGLSSVRLLSLYDN--RITTISPGAFTTL 652
Query: 411 CTRSSV 416
+ S++
Sbjct: 653 VSLSTI 658
Score = 77 (32.2 bits), Expect = 2.8e-14, Sum P(3) = 2.8e-14
Identities = 25/96 (26%), Positives = 45/96 (46%)
Query: 601 CRTPRNSTIHHHACFIPVAQQEDDINRNNSDSRYVKLQATTIL--LSSLKVLSIAHNQFS 658
C + S I H +P + D+ N++D L+AT I L +L+ +++++N+
Sbjct: 518 CSNQKLSRIPSH---LP--EYTTDLRLNDND--IAVLEATGIFKKLPNLRKINLSNNRIK 570
Query: 659 SVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNVIG 694
VR GA G + L NQ++ + F + G
Sbjct: 571 EVREGAFDGAAGVQELMLTGNQLETMHGRMFRGLSG 606
Score = 71 (30.1 bits), Expect = 1.1e-13, Sum P(3) = 1.1e-13
Identities = 16/50 (32%), Positives = 25/50 (50%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNVI 693
LS LK L + N S V AGL + LS + N+I + +F+ ++
Sbjct: 604 LSGLKTLMLRSNLISCVNNDTFAGLSSVRLLSLYDNRITTISPGAFTTLV 653
Score = 67 (28.6 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 17/52 (32%), Positives = 25/52 (48%)
Query: 642 ILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNVI 693
I LK + I+ NQ S + A GL LTSL + N+I + F ++
Sbjct: 328 IQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLV 379
Score = 63 (27.2 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 20/73 (27%), Positives = 33/73 (45%)
Query: 315 LSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 374
++ L L N + AV L+ LT +DLS+N + LT + + L L L N +
Sbjct: 754 VTELYLEGNHLTAVP-KELSTFRQLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNRLR 812
Query: 375 MEPECIYVGFNTM 387
P + G ++
Sbjct: 813 CIPVHAFNGLRSL 825
Score = 59 (25.8 bits), Expect = 1.9e-12, Sum P(3) = 1.9e-12
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
+S L L +++N+ + A GL L L+ H N I + + SF+++
Sbjct: 798 MSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDL 846
Score = 54 (24.1 bits), Expect = 6.1e-12, Sum P(3) = 6.1e-12
Identities = 13/43 (30%), Positives = 25/43 (58%)
Query: 650 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L + N ++V + L+ +LT + +N I +L +H+FSN+
Sbjct: 757 LYLEGNHLTAVPK-ELSTFRQLTLIDLSNNSISMLTNHTFSNM 798
Score = 53 (23.7 bits), Expect = 7.7e-12, Sum P(3) = 7.7e-12
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
L SL+VL++ N SSV G+ L L+ L+ N +
Sbjct: 822 LRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGINPL 859
Score = 53 (23.7 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L SL L + N+ + + +G GL L L + N+I+ L ++F ++
Sbjct: 354 LKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDL 402
Score = 51 (23.0 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 11/36 (30%), Positives = 23/36 (63%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 679
LSS+++LS+ N+ +++ GA L L++++ N
Sbjct: 628 LSSVRLLSLYDNRITTISPGAFTTLVSLSTINLLSN 663
Score = 48 (22.0 bits), Expect = 2.5e-11, Sum P(3) = 2.5e-11
Identities = 8/46 (17%), Positives = 25/46 (54%)
Query: 647 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L ++ +++N S + + + L++L +N++ + H+F+ +
Sbjct: 777 LTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNRLRCIPVHAFNGL 822
Score = 42 (19.8 bits), Expect = 9.9e-11, Sum P(3) = 9.9e-11
Identities = 14/68 (20%), Positives = 31/68 (45%)
Query: 625 INRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL 684
IN +N+ + V+ + + ++ L + NQ ++ GL L +L N I +
Sbjct: 562 INLSNNRIKEVR-EGAFDGAAGVQELMLTGNQLETMHGRMFRGLSGLKTLMLRSNLISCV 620
Query: 685 EDHSFSNV 692
+ +F+ +
Sbjct: 621 NNDTFAGL 628
Score = 42 (19.8 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 11/38 (28%), Positives = 16/38 (42%)
Query: 650 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI-DVLED 686
+ + N S+ GA KL + NQI D+ D
Sbjct: 312 IRLEQNSIKSIPAGAFIQYKKLKRIDISKNQISDIAPD 349
>UNIPROTKB|O88280 [details] [associations]
symbol:Slit3 "Slit homolog 3 protein" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
RGD:69311 GO:GO:0008285 GO:GO:0005615 GO:GO:0007420 GO:GO:0016020
GO:GO:0030308 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
Pfam:PF01463 GO:GO:0051414 GO:GO:0050919 GO:GO:0035385
GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T CTD:6586 KO:K06850 EMBL:AB011531 IPI:IPI00207574
PIR:T13953 RefSeq:NP_112611.1 UniGene:Rn.12298
ProteinModelPortal:O88280 SMR:O88280 IntAct:O88280 STRING:O88280
PRIDE:O88280 GeneID:83467 KEGG:rno:83467 UCSC:RGD:69311
InParanoid:O88280 NextBio:615863 ArrayExpress:O88280
Genevestigator:O88280 GermOnline:ENSRNOG00000007377 Uniprot:O88280
Length = 1523
Score = 167 (63.8 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 51/156 (32%), Positives = 78/156 (50%)
Query: 197 LDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHN---LLA 253
LDL N + +++ L LRVL L+ N+++V A Q L+ + L L+ N +L
Sbjct: 66 LDLDRNNITRITKMDFTGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLP 125
Query: 254 GPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALS 313
L ST P+L+ L ++ NQ + R A G+ + +L +N I +ED +FRAL
Sbjct: 126 ELLFQST-PKLTRL---DLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALR 181
Query: 314 TLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFL 349
L L L +N I + S H+ + TL L N L
Sbjct: 182 DLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHL 217
Score = 160 (61.4 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 49/170 (28%), Positives = 76/170 (44%)
Query: 169 NLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRL 228
N +RLDL N + ++ F GL +L L L N++ + + L L LRL N+L
Sbjct: 62 NAERLDLDRNNITRITKMDFTGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKL 121
Query: 229 TVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGL 288
V Q +T LDLS N + G + ++ +K L + +N S + GA L
Sbjct: 122 QVLPELLFQSTPKLTRLDLSENQIQG-IPRKAFRGVTGVKNLQLDNNHISCIEDGAFRAL 180
Query: 289 DKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSN 338
L L+ ++N I + SF + + L L N + LA LS+
Sbjct: 181 RDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYC--DCHLAWLSD 228
Score = 153 (58.9 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 82/312 (26%), Positives = 129/312 (41%)
Query: 84 ISESLRGLEPDERVSL--LDCTLSNVTVLP-GKFLEGVTLHGLVISSGELKNISDGAFIG 140
I+E +GL D VSL L + + L F + L+ L + +L+ IS G F
Sbjct: 367 ITEIPKGLF-DGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAP 425
Query: 141 LSSPLQALGLPNN-LLSVVPTSALAP-LAPN-LDRLDLSHNQLYKLENTSFKGLSSLNF- 196
L S +Q L L N + LA L N ++ + +L N + S F
Sbjct: 426 LQS-IQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFR 484
Query: 197 LDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRS-----VTDLDLSHNL 251
S + S +C LV R +G + S L + S TDL L+ N
Sbjct: 485 CSGSEDYRNRFSSECFMDLVCPEKCRCEGTIVDCSN-QKLSRIPSHLPEYTTDLRLNDND 543
Query: 252 LAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRA 311
+A +L +L+ +++++N+ VR GA G + L NQ++ + FR
Sbjct: 544 IAVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRG 603
Query: 312 LSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
LS L L L N I V+ + A LS++ L L N + ++ T L SL + L N
Sbjct: 604 LSGLKTLMLRSNLISCVNNDTFAGLSSVRLLSLYDNRITTISPGAFTTLVSLSTINLLSN 663
Query: 372 DISMEPECIYVG 383
+ ++G
Sbjct: 664 PFNCNCHMAWLG 675
Score = 152 (58.6 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 43/155 (27%), Positives = 76/155 (49%)
Query: 234 AALQGL-RSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLT 292
A +G+ R+ LDL N + + L +L+VL + NQ S + RGA L +L
Sbjct: 54 AVPRGIPRNAERLDLDRNNITR-ITKMDFTGLKNLRVLHLEDNQVSVIERGAFQDLKQLE 112
Query: 293 SLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRAL 352
L + N++ VL + F++ L+ LDL+ N+I + + ++ + L L +N + +
Sbjct: 113 RLRLNKNKLQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCI 172
Query: 353 TQDLITPLKSLQELRLDDNDISMEPECIYVGFNTM 387
L+ L+ L L++N+IS + FN M
Sbjct: 173 EDGAFRALRDLEILTLNNNNIS---RILVTSFNHM 204
Score = 151 (58.2 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 84/314 (26%), Positives = 135/314 (42%)
Query: 89 RGLEPD-ERVSLLDCTLSNVTVLPGKFLEGVT-LHGLVISSGELKNISDGAFIGLSSPLQ 146
RG D +++ L + + VLP + L L +S +++ I AF G++ ++
Sbjct: 102 RGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTG-VK 160
Query: 147 ALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMT 206
L L NN +S + A L +L+ L L++N + ++ TSF + + L L N L
Sbjct: 161 NLQLDNNHISCIEDGAFRALR-DLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYC 219
Query: 207 LSQDC-LAPLVT-LRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRL 264
DC LA L LR R G L+G SV D+ + GP +
Sbjct: 220 ---DCHLAWLSDWLRQRRTIGQFTLCMAPVHLRGF-SVADVQKKEYVCPGPHSEAPACNA 275
Query: 265 SSLKVLSIAH--NQFSSVRRGAL----AGLDK-LTSLSCHHNQIDVLEDHSFRALSTLSH 317
+SL S N R L A L + + + N I + +F L
Sbjct: 276 NSLSCPSACSCSNNIVDCRGKGLTEIPANLPEGIVEIRLEQNSIKSIPAGAFIQYKKLKR 335
Query: 318 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEP 377
+D++ N+I ++ + L +LT+L L N + + + L L SLQ L L+ N I+
Sbjct: 336 IDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKIN--- 392
Query: 378 ECIYVGFNTM-DLE 390
C+ V NT DL+
Sbjct: 393 -CLRV--NTFQDLQ 403
Score = 150 (57.9 bits), Expect = 2.8e-14, Sum P(3) = 2.8e-14
Identities = 53/191 (27%), Positives = 82/191 (42%)
Query: 65 ACDLPHTLRCTANKSDLYAISESL--RGLEPDERVSLLDCTLSNVTVLPGKFLEGV-TLH 121
AC P C+A D + + RG+ P LD +N+T + G+ L
Sbjct: 33 AC--PTKCTCSAASVDCHGLGLRAVPRGI-P-RNAERLDLDRNNITRITKMDFTGLKNLR 88
Query: 122 GLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLY 181
L + ++ I GAF L L+ L L N L V+P L P L RLDLS NQ+
Sbjct: 89 VLHLEDNQVSVIERGAFQDLKQ-LERLRLNKNKLQVLP-ELLFQSTPKLTRLDLSENQIQ 146
Query: 182 KLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRS 241
+ +F+G++ + L L N + + L L +L L N ++ +V + +
Sbjct: 147 GIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMPK 206
Query: 242 VTDLDLSHNLL 252
+ L L N L
Sbjct: 207 IRTLRLHSNHL 217
Score = 137 (53.3 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
Identities = 46/153 (30%), Positives = 71/153 (46%)
Query: 220 VLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAG-PLGPSTVPRLSSLKVLSIAHNQFS 278
++ +G LT + A L + ++ L N + P G + LK + I+ NQ S
Sbjct: 290 IVDCRGKGLT-EIPANLP--EGIVEIRLEQNSIKSIPAGAFI--QYKKLKRIDISKNQIS 344
Query: 279 SVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSN 338
+ A GL LTSL + N+I + F L +L L L N+I + + L N
Sbjct: 345 DIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQN 404
Query: 339 LTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
L L L N L+ +++ L PL+S+Q L L N
Sbjct: 405 LNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQN 437
Score = 131 (51.2 bits), Expect = 2.6e-09, Sum P(3) = 2.6e-09
Identities = 38/128 (29%), Positives = 61/128 (47%)
Query: 150 LPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQ 209
L N + +P A L R+D+S NQ+ + +F+GL SL L L NK+ + +
Sbjct: 314 LEQNSIKSIPAGAFIQYK-KLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPK 372
Query: 210 DCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKV 269
LV+L++L L N++ V Q L+++ L L N L + L S++
Sbjct: 373 GLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQ-TISKGLFAPLQSIQT 431
Query: 270 LSIAHNQF 277
L +A N F
Sbjct: 432 LHLAQNPF 439
Score = 130 (50.8 bits), Expect = 0.00022, P = 0.00022
Identities = 37/103 (35%), Positives = 55/103 (53%)
Query: 221 LRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSV 280
L L+GN LT +V L R +T +DLS+N ++ L T +S L L +++N+ +
Sbjct: 757 LYLEGNHLT-AVPKELSTFRQLTLIDLSNNSIS-MLTNHTFSNMSHLSTLILSYNRLRCI 814
Query: 281 RRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 323
A GL L L+ H N I + + SF L++LSHL L N
Sbjct: 815 PVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGIN 857
Score = 127 (49.8 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 68/299 (22%), Positives = 123/299 (41%)
Query: 105 SNVTVLP-GKFLEGVTLHGLVISSGELKNISDGAFIGLSSP-LQALGLPNNLLSVVPTSA 162
+ V+V+ G F + L L ++ +L+ + + F S+P L L L N + +P A
Sbjct: 95 NQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLF--QSTPKLTRLDLSENQIQGIPRKA 152
Query: 163 LAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLR 222
+ + L L +N + +E+ +F+ L L L L+ N + + + +R LR
Sbjct: 153 FRGVT-GVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMPKIRTLR 211
Query: 223 LQGNRLTVSV-VAALQG-LRSVTDLDLSHNLLAGPL---GPSTVPRLSSLKVLSIAHNQF 277
L N L +A L LR + L P+ G S V H++
Sbjct: 212 LHSNHLYCDCHLAWLSDWLRQRRTIG-QFTLCMAPVHLRGFSVADVQKKEYVCPGPHSEA 270
Query: 278 SSVRRGALAGLDKLTSLSCHHNQIDV----LEDHSFRALSTLSHLDLAHNRIVAVSGASL 333
+ +L+ ++ SC +N +D L + + + L N I ++ +
Sbjct: 271 PACNANSLSCP---SACSCSNNIVDCRGKGLTEIPANLPEGIVEIRLEQNSIKSIPAGAF 327
Query: 334 AHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELI 392
L +D+S N + + D LKSL L L N I+ P+ ++ G ++ L L+
Sbjct: 328 IQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLL 386
Score = 114 (45.2 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 35/95 (36%), Positives = 55/95 (57%)
Query: 287 GLDK-LTSLSCHHNQIDVL--EDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLD 343
G+ K +T L N + + E +FR L TL +DL++N I ++ + +++S+L+TL
Sbjct: 749 GMPKDVTELYLEGNHLTAVPKELSTFRQL-TL--IDLSNNSISMLTNHTFSNMSHLSTLI 805
Query: 344 LSHNFLRALTQDLITPLKSLQELRLDDNDISMEPE 378
LS+N LR + L+SL+ L L NDIS PE
Sbjct: 806 LSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPE 840
Score = 99 (39.9 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 31/116 (26%), Positives = 57/116 (49%)
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 317
P +P+ + L + N ++V + L+ +LT + +N I +L +H+F +S LS
Sbjct: 747 PKGMPK--DVTELYLEGNHLTAVPK-ELSTFRQLTLIDLSNNSISMLTNHTFSNMSHLST 803
Query: 318 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 373
L L++NR+ + + L +L L L N + ++ + L SL L L N +
Sbjct: 804 LILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGINPL 859
Score = 96 (38.9 bits), Expect = 2.8e-14, Sum P(3) = 2.8e-14
Identities = 30/116 (25%), Positives = 51/116 (43%)
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 317
P+ +P + + + N S+ GA KL + NQI + +F+ L +L+
Sbjct: 302 PANLPE--GIVEIRLEQNSIKSIPAGAFIQYKKLKRIDISKNQISDIAPDAFQGLKSLTS 359
Query: 318 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 373
L L N+I + L +L L L+ N + L + L++L L L DN +
Sbjct: 360 LVLYGNKITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKL 415
Score = 85 (35.0 bits), Expect = 2.5e-11, Sum P(3) = 2.5e-11
Identities = 33/126 (26%), Positives = 57/126 (45%)
Query: 292 TSLSCHHNQIDVLEDHS-FRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLR 350
T L + N I VLE F+ L L ++L++NRI V + + + L L+ N L
Sbjct: 535 TDLRLNDNDIAVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLE 594
Query: 351 ALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELIYSGVWRHSTLLIPVMLSL 410
+ + L L+ L L N IS + G +++ L +Y R +T+ +L
Sbjct: 595 TMHGRMFRGLSGLKTLMLRSNLISCVNNDTFAGLSSVRLLSLYDN--RITTISPGAFTTL 652
Query: 411 CTRSSV 416
+ S++
Sbjct: 653 VSLSTI 658
Score = 77 (32.2 bits), Expect = 2.8e-14, Sum P(3) = 2.8e-14
Identities = 25/96 (26%), Positives = 45/96 (46%)
Query: 601 CRTPRNSTIHHHACFIPVAQQEDDINRNNSDSRYVKLQATTIL--LSSLKVLSIAHNQFS 658
C + S I H +P + D+ N++D L+AT I L +L+ +++++N+
Sbjct: 518 CSNQKLSRIPSH---LP--EYTTDLRLNDND--IAVLEATGIFKKLPNLRKINLSNNRIK 570
Query: 659 SVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNVIG 694
VR GA G + L NQ++ + F + G
Sbjct: 571 EVREGAFDGAAGVQELMLTGNQLETMHGRMFRGLSG 606
Score = 71 (30.1 bits), Expect = 1.1e-13, Sum P(3) = 1.1e-13
Identities = 16/50 (32%), Positives = 25/50 (50%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNVI 693
LS LK L + N S V AGL + LS + N+I + +F+ ++
Sbjct: 604 LSGLKTLMLRSNLISCVNNDTFAGLSSVRLLSLYDNRITTISPGAFTTLV 653
Score = 67 (28.6 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 17/52 (32%), Positives = 25/52 (48%)
Query: 642 ILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNVI 693
I LK + I+ NQ S + A GL LTSL + N+I + F ++
Sbjct: 328 IQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLV 379
Score = 63 (27.2 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 20/73 (27%), Positives = 33/73 (45%)
Query: 315 LSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 374
++ L L N + AV L+ LT +DLS+N + LT + + L L L N +
Sbjct: 754 VTELYLEGNHLTAVP-KELSTFRQLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNRLR 812
Query: 375 MEPECIYVGFNTM 387
P + G ++
Sbjct: 813 CIPVHAFNGLRSL 825
Score = 59 (25.8 bits), Expect = 1.9e-12, Sum P(3) = 1.9e-12
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
+S L L +++N+ + A GL L L+ H N I + + SF+++
Sbjct: 798 MSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDL 846
Score = 54 (24.1 bits), Expect = 6.1e-12, Sum P(3) = 6.1e-12
Identities = 13/43 (30%), Positives = 25/43 (58%)
Query: 650 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L + N ++V + L+ +LT + +N I +L +H+FSN+
Sbjct: 757 LYLEGNHLTAVPK-ELSTFRQLTLIDLSNNSISMLTNHTFSNM 798
Score = 53 (23.7 bits), Expect = 7.7e-12, Sum P(3) = 7.7e-12
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
L SL+VL++ N SSV G+ L L+ L+ N +
Sbjct: 822 LRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGINPL 859
Score = 53 (23.7 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L SL L + N+ + + +G GL L L + N+I+ L ++F ++
Sbjct: 354 LKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDL 402
Score = 51 (23.0 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 11/36 (30%), Positives = 23/36 (63%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 679
LSS+++LS+ N+ +++ GA L L++++ N
Sbjct: 628 LSSVRLLSLYDNRITTISPGAFTTLVSLSTINLLSN 663
Score = 48 (22.0 bits), Expect = 2.5e-11, Sum P(3) = 2.5e-11
Identities = 8/46 (17%), Positives = 25/46 (54%)
Query: 647 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L ++ +++N S + + + L++L +N++ + H+F+ +
Sbjct: 777 LTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNRLRCIPVHAFNGL 822
Score = 42 (19.8 bits), Expect = 9.9e-11, Sum P(3) = 9.9e-11
Identities = 14/68 (20%), Positives = 31/68 (45%)
Query: 625 INRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL 684
IN +N+ + V+ + + ++ L + NQ ++ GL L +L N I +
Sbjct: 562 INLSNNRIKEVR-EGAFDGAAGVQELMLTGNQLETMHGRMFRGLSGLKTLMLRSNLISCV 620
Query: 685 EDHSFSNV 692
+ +F+ +
Sbjct: 621 NNDTFAGL 628
Score = 42 (19.8 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 11/38 (28%), Positives = 16/38 (42%)
Query: 650 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI-DVLED 686
+ + N S+ GA KL + NQI D+ D
Sbjct: 312 IRLEQNSIKSIPAGAFIQYKKLKRIDISKNQISDIAPD 349
>WB|WBGene00004854 [details] [associations]
symbol:slt-1 species:6239 "Caenorhabditis elegans"
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=ISS] [GO:0005102 "receptor binding"
evidence=ISS;IPI] [GO:0033563 "dorsal/ventral axon guidance"
evidence=IGI;IMP] [GO:0001764 "neuron migration" evidence=IMP]
[GO:0048843 "negative regulation of axon extension involved in axon
guidance" evidence=IGI] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0001764
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005102 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR006207
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 HSSP:P00740
GO:GO:0033563 GeneTree:ENSGT00700000104083 EMBL:Z69792
GO:GO:0048843 EMBL:AL022270 PIR:D89711 PIR:T22025
RefSeq:NP_510437.2 ProteinModelPortal:G5EFX6 SMR:G5EFX6
EnsemblMetazoa:F40E10.4 GeneID:181562 KEGG:cel:CELE_F40E10.4
CTD:181562 WormBase:F40E10.4 OMA:KSISHIA NextBio:914450
Uniprot:G5EFX6
Length = 1410
Score = 161 (61.7 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 89/331 (26%), Positives = 148/331 (44%)
Query: 64 CACDLPHTLRCTANKSDLYAISESL-----RGLEPDERVSLLDCTLSNVTVLPGKFLEGV 118
C C T+ C NK L I S+ + L +S +D SN+ VL
Sbjct: 489 CDC-YGTTVDC--NKRGLNTIPTSIPRFATQLLLSGNNISTVDLN-SNIHVLEN------ 538
Query: 119 TLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHN 178
L L +S+ + I+D +F LS L+ L L +N L + L + NL+ LDLS N
Sbjct: 539 -LEVLDLSNNHITFINDKSFEKLSK-LRELRLNDNKLHHFSSMVLDEQS-NLEILDLSGN 595
Query: 179 QLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDC-LAPLVTLRVLRLQGNRLTVSVVAALQ 237
+ + F + + + + N L+ DC + PL++ LR + ++ + Q
Sbjct: 596 NIQCFSSIFFNKATRIREIKVIGNDLLC---DCRILPLMSW--LRSNSSH-SIDIPPCQQ 649
Query: 238 GLRSVTDLDLSHNLLAGP----LGPSTV--PRLSSL-KVLSIAHNQFSSVRRGALAGLDK 290
S + D A P S + P+ S L +V+ ++ +S + D
Sbjct: 650 FQYSDNESD-KQRCAAFPEETCSDDSNLCPPKCSCLDRVVRCSNKNLTSFP--SRIPFDT 706
Query: 291 LTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLR 350
T L N I+ + H L +L+ LDL+HNR++++ + ++L+ L+TL +S+N LR
Sbjct: 707 -TELYLDANYINEIPAHDLNRLYSLTKLDLSHNRLISLENNTFSNLTRLSTLIISYNKLR 765
Query: 351 ALTQDLITPLKSLQELRLDDNDISMEPECIY 381
L L +L+ L L NDIS P+ +
Sbjct: 766 CLQPLAFNGLNALRILSLHGNDISFLPQSAF 796
Score = 159 (61.0 bits), Expect = 8.8e-11, Sum P(2) = 8.8e-11
Identities = 57/188 (30%), Positives = 87/188 (46%)
Query: 204 LMTLSQDCLAPLVTL-RVLRLQGNRLTVSVVAALQGLRSVT-DLDLSHNLLAGPLGPSTV 261
L+ S C A V + R + G +LT Q + + T LDL N + +GP+
Sbjct: 10 LIPESATCPAECVCVDRTVSCVGQQLT----EVPQNIPNDTIRLDLQDNEIT-KIGPNDF 64
Query: 262 PRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 321
L +LK L + NQ ++ + + L L L N+I L D+ F+ L+HLDL+
Sbjct: 65 SSLMNLKALQLMDNQIVTIHNQSFSSLVFLQKLRLSRNRIRHLPDNVFQNNLKLTHLDLS 124
Query: 322 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIY 381
N I VS A L L L+L N + L ++I+ SL+ L L+ N ++ E
Sbjct: 125 ENDITVVSDAQLQGPEFLEVLNLDKNHIFCLENNVISSWVSLEVLTLNGNRLTTFEEPSN 184
Query: 382 VGFNTMDL 389
F +DL
Sbjct: 185 ARFRQLDL 192
Score = 154 (59.3 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 40/105 (38%), Positives = 57/105 (54%)
Query: 148 LGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTL 207
L L N ++ +P L L +L +LDLSHN+L LEN +F L+ L+ L +SYNKL L
Sbjct: 709 LYLDANYINEIPAHDLNRLY-SLTKLDLSHNRLISLENNTFSNLTRLSTLIISYNKLRCL 767
Query: 208 SQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLL 252
L LR+L L GN ++ +A L S+T + + N L
Sbjct: 768 QPLAFNGLNALRILSLHGNDISFLPQSAFSNLTSITHIAVGSNSL 812
Score = 142 (55.0 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 84/321 (26%), Positives = 133/321 (41%)
Query: 69 PHTLRCTANKSDLYAI-SESLRGLEPDERVSLLDCTLSNVT-VLPGKFLEGVTLHGLVIS 126
P T ++ + +I S S + L+ ++ LD + + +T + P FL LH LV+
Sbjct: 287 PSTTEIRLEQNQISSIPSHSFKNLK---NLTRLDLSKNIITEIQPKAFLGLHNLHTLVLY 343
Query: 127 SGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENT 186
+ ++ F GL S LQ L L N L+ + + P L L L N + +
Sbjct: 344 GNNITDLKSDTFEGLGS-LQLLLLNANQLTCIRRGTFDHV-PKLSMLSLYDNDIKSISEV 401
Query: 187 SFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAAL-QGLRSVTDL 245
+F+ L+SL+ L L+ N L+ DC L L + LQ N T + LR
Sbjct: 402 TFQNLTSLSTLHLAKNPLIC---DC--NLQWLAQINLQKNIETSGARCEQPKRLRKKKFA 456
Query: 246 DLSHNLLAGPLGPSTVPRLS-SLKVLSIAHNQ---FSSVRRGALAGLDKL--------TS 293
L N S V + S + SI Q + + GL+ + T
Sbjct: 457 TLPPNKFKCKGSESFVSMYADSCFIDSICPTQCDCYGTTVDCNKRGLNTIPTSIPRFATQ 516
Query: 294 LSCHHNQIDVLEDHS-FRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRAL 352
L N I ++ +S L L LDL++N I ++ S LS L L L+ N L
Sbjct: 517 LLLSGNNISTVDLNSNIHVLENLEVLDLSNNHITFINDKSFEKLSKLRELRLNDNKLHHF 576
Query: 353 TQDLITPLKSLQELRLDDNDI 373
+ ++ +L+ L L N+I
Sbjct: 577 SSMVLDEQSNLEILDLSGNNI 597
Score = 130 (50.8 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 50/177 (28%), Positives = 79/177 (44%)
Query: 155 LSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAP 214
L+ VPT+ L P+ + L NQ+ + + SFK L +L LDLS N + +
Sbjct: 278 LTYVPTN----LPPSTTEIRLEQNQISSIPSHSFKNLKNLTRLDLSKNIITEIQPKAFLG 333
Query: 215 LVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAH 274
L L L L GN +T +GL S+ L L+ N L + T + L +LS+
Sbjct: 334 LHNLHTLVLYGNNITDLKSDTFEGLGSLQLLLLNANQLTC-IRRGTFDHVPKLSMLSLYD 392
Query: 275 NQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGA 331
N S+ L L++L N + + + + L L+ ++L N + SGA
Sbjct: 393 NDIKSISEVTFQNLTSLSTLHLAKNPL-ICDCN----LQWLAQINLQKN--IETSGA 442
Score = 127 (49.8 bits), Expect = 2.9e-14, Sum P(3) = 2.9e-14
Identities = 44/167 (26%), Positives = 76/167 (45%)
Query: 64 CACDLPHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVL-PGKFLEGVTLHG 122
C C + T+ C + L + +++ P++ + L D + +T + P F + L
Sbjct: 21 CVC-VDRTVSCVGQQ--LTEVPQNI----PNDTIRL-DLQDNEITKIGPNDFSSLMNLKA 72
Query: 123 LVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYK 182
L + ++ I + +F L LQ L L N + +P + L LDLS N +
Sbjct: 73 LQLMDNQIVTIHNQSFSSLVF-LQKLRLSRNRIRHLPDNVFQNNL-KLTHLDLSENDITV 130
Query: 183 LENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLT 229
+ + +G L L+L N + L + ++ V+L VL L GNRLT
Sbjct: 131 VSDAQLQGPEFLEVLNLDKNHIFCLENNVISSWVSLEVLTLNGNRLT 177
Score = 127 (49.8 bits), Expect = 8.1e-11, Sum P(3) = 8.1e-11
Identities = 40/149 (26%), Positives = 69/149 (46%)
Query: 172 RLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVS 231
RLDL N++ K+ F L +L L L N+++T+ + LV L+ LRL NR+
Sbjct: 48 RLDLQDNEITKIGPNDFSSLMNLKALQLMDNQIVTIHNQSFSSLVFLQKLRLSRNRIRHL 107
Query: 232 VVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKL 291
Q +T LDLS N + + + + L+VL++ N + ++ L
Sbjct: 108 PDNVFQNNLKLTHLDLSENDIT-VVSDAQLQGPEFLEVLNLDKNHIFCLENNVISSWVSL 166
Query: 292 TSLSCHHNQIDVLEDHS---FRALSTLSH 317
L+ + N++ E+ S FR L ++
Sbjct: 167 EVLTLNGNRLTTFEEPSNARFRQLDLFNN 195
Score = 114 (45.2 bits), Expect = 2.9e-14, Sum P(3) = 2.9e-14
Identities = 30/83 (36%), Positives = 41/83 (49%)
Query: 292 TSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRA 351
T + NQI + HSF+ L L+ LDL+ N I + + L NL TL L N +
Sbjct: 290 TEIRLEQNQISSIPSHSFKNLKNLTRLDLSKNIITEIQPKAFLGLHNLHTLVLYGNNITD 349
Query: 352 LTQDLITPLKSLQELRLDDNDIS 374
L D L SLQ L L+ N ++
Sbjct: 350 LKSDTFEGLGSLQLLLLNANQLT 372
Score = 105 (42.0 bits), Expect = 9.8e-10, Sum P(2) = 9.8e-10
Identities = 34/131 (25%), Positives = 65/131 (49%)
Query: 219 RVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFS 278
RV+R LT S + + T+L L N + + + RL SL L ++HN+
Sbjct: 686 RVVRCSNKNLT-SFPSRIPF--DTTELYLDANYI-NEIPAHDLNRLYSLTKLDLSHNRLI 741
Query: 279 SVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSN 338
S+ + L +L++L +N++ L+ +F L+ L L L N I + ++ ++L++
Sbjct: 742 SLENNTFSNLTRLSTLIISYNKLRCLQPLAFNGLNALRILSLHGNDISFLPQSAFSNLTS 801
Query: 339 LTTLDLSHNFL 349
+T + + N L
Sbjct: 802 ITHIAVGSNSL 812
Score = 103 (41.3 bits), Expect = 9.2e-12, Sum P(3) = 9.2e-12
Identities = 39/132 (29%), Positives = 63/132 (47%)
Query: 148 LGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTL 207
L L +N ++ + + + L NL L L NQ+ + N SF L L L LS N++ L
Sbjct: 49 LDLQDNEITKIGPNDFSSLM-NLKALQLMDNQIVTIHNQSFSSLVFLQKLRLSRNRIRHL 107
Query: 208 SQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSL 267
+ + L L L N +TV A LQG + L+L N + L + + SL
Sbjct: 108 PDNVFQNNLKLTHLDLSENDITVVSDAQLQGPEFLEVLNLDKNHIFC-LENNVISSWVSL 166
Query: 268 KVLSIAHNQFSS 279
+VL++ N+ ++
Sbjct: 167 EVLTLNGNRLTT 178
Score = 100 (40.3 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 36/142 (25%), Positives = 66/142 (46%)
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 317
PS +P L + N + + L L LT L HN++ LE+++F L+ LS
Sbjct: 699 PSRIP--FDTTELYLDANYINEIPAHDLNRLYSLTKLDLSHNRLISLENNTFSNLTRLST 756
Query: 318 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEP 377
L +++N++ + + L+ L L L N + L Q + L S+ + + N S+
Sbjct: 757 LIISYNKLRCLQPLAFNGLNALRILSLHGNDISFLPQSAFSNLTSITHIAVGSN--SLYC 814
Query: 378 ECIYVGFNT-MDLELIYSGVWR 398
+C F+ + + I +G+ R
Sbjct: 815 DCNMAWFSKWIKSKFIEAGIAR 836
Score = 82 (33.9 bits), Expect = 2.9e-14, Sum P(3) = 2.9e-14
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 630 SDSRYVKLQATTIL-LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHS 688
S +R + L+ T L+ L L I++N+ ++ A GL+ L LS H N I L +
Sbjct: 736 SHNRLISLENNTFSNLTRLSTLIISYNKLRCLQPLAFNGLNALRILSLHGNDISFLPQSA 795
Query: 689 FSNV 692
FSN+
Sbjct: 796 FSNL 799
Score = 80 (33.2 bits), Expect = 8.1e-11, Sum P(3) = 8.1e-11
Identities = 22/77 (28%), Positives = 37/77 (48%)
Query: 316 SHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISM 375
+ + L N+I ++ S +L NLT LDLS N + + L +L L L N+I+
Sbjct: 290 TEIRLEQNQISSIPSHSFKNLKNLTRLDLSKNIITEIQPKAFLGLHNLHTLVLYGNNITD 349
Query: 376 EPECIYVGFNTMDLELI 392
+ G ++ L L+
Sbjct: 350 LKSDTFEGLGSLQLLLL 366
Score = 79 (32.9 bits), Expect = 1.6e-10, Sum P(3) = 1.6e-10
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L SL++L + NQ + +RRG + KL+ LS + N I + + +F N+
Sbjct: 358 LGSLQLLLLNANQLTCIRRGTFDHVPKLSMLSLYDNDIKSISEVTFQNL 406
Score = 65 (27.9 bits), Expect = 1.5e-12, Sum P(3) = 1.5e-12
Identities = 16/64 (25%), Positives = 36/64 (56%)
Query: 631 DSRYV-KLQATTI-LLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHS 688
D+ Y+ ++ A + L SL L ++HN+ S+ + L +L++L +N++ L+ +
Sbjct: 712 DANYINEIPAHDLNRLYSLTKLDLSHNRLISLENNTFSNLTRLSTLIISYNKLRCLQPLA 771
Query: 689 FSNV 692
F+ +
Sbjct: 772 FNGL 775
Score = 50 (22.7 bits), Expect = 5.1e-11, Sum P(3) = 5.1e-11
Identities = 10/38 (26%), Positives = 22/38 (57%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
L++L++LS+ N S + + A + L +T ++ N +
Sbjct: 775 LNALRILSLHGNDISFLPQSAFSNLTSITHIAVGSNSL 812
Score = 48 (22.0 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 19/76 (25%), Positives = 30/76 (39%)
Query: 614 CFIPVAQQEDDINRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTS 673
C +P ++ +S YV T L S + + NQ SS+ + L LT
Sbjct: 260 CPLPCTCTGTTVDCRDSGLTYVP----TNLPPSTTEIRLEQNQISSIPSHSFKNLKNLTR 315
Query: 674 LSCHHNQIDVLEDHSF 689
L N I ++ +F
Sbjct: 316 LDLSKNIITEIQPKAF 331
Score = 46 (21.3 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 14/58 (24%), Positives = 26/58 (44%)
Query: 636 KLQATTIL-LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
++Q L L +L L + N + ++ GL L L + NQ+ + +F +V
Sbjct: 325 EIQPKAFLGLHNLHTLVLYGNNITDLKSDTFEGLGSLQLLLLNANQLTCIRRGTFDHV 382
Score = 44 (20.5 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 672 TSLSCHHNQIDVLEDHSFSNV 692
T + NQI + HSF N+
Sbjct: 290 TEIRLEQNQISSIPSHSFKNL 310
>UNIPROTKB|F1LN28 [details] [associations]
symbol:Slit2 "Slit homolog 2 protein" species:10116 "Rattus
norvegicus" [GO:0004963 "follicle-stimulating hormone receptor
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR002272 PRINTS:PR01143
PROSITE:PS51450 RGD:69310 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0042699
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0004963
Pfam:PF01463 IPI:IPI00951919 Ensembl:ENSRNOT00000065056
ArrayExpress:F1LN28 Uniprot:F1LN28
Length = 680
Score = 169 (64.5 bits), Expect = 5.1e-11, Sum P(2) = 5.1e-11
Identities = 74/294 (25%), Positives = 124/294 (42%)
Query: 108 TVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLA 167
T+ G F + L L ++ L+ + F+G ++ L L L N + +P A A
Sbjct: 7 TIERGAFQDLKELERLRLNRNNLQLFPELLFLG-TAKLYRLDLSENQIQAIPRKAFRG-A 64
Query: 168 PNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNR 227
++ L L +NQ+ +E+ +F+ L L L L+ N + LS + LR RL N
Sbjct: 65 VDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNN 124
Query: 228 LTVSV-VAALQG-LRSVTDLDLSHNLLAGP--LGPSTVPRLSSLK-VLSIAHNQFSSVRR 282
L +A L LR + L + GP L V + + V S S
Sbjct: 125 LYCDCHLAWLSDWLRQRPRVGL-YTQCMGPSHLRGHNVAEVQKREFVCSGPEKSHQSFMA 183
Query: 283 GALAGLDKLTSLSCHHNQIDV----LEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSN 338
+ + L + +C +N +D L + T++ + L N I + + +
Sbjct: 184 PSCSVLHCPIACTCSNNIVDCRGKGLTEIPTNLPETITEIRLEQNSIRVIPPGAFSPYKK 243
Query: 339 LTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELI 392
L LDLS+N + L D L+SL L L N I+ P+ ++ G ++ L L+
Sbjct: 244 LRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLL 297
Score = 163 (62.4 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 45/137 (32%), Positives = 70/137 (51%)
Query: 141 LSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLS 200
L + + L N + V+P A +P L RLDLS+NQ+ +L +F+GL SLN L L
Sbjct: 216 LPETITEIRLEQNSIRVIPPGAFSPYK-KLRRLDLSNNQISELAPDAFQGLRSLNSLVLY 274
Query: 201 YNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPST 260
NK+ L + L +L++L L N++ V A Q L ++ L L N L + T
Sbjct: 275 GNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQ-TVAKGT 333
Query: 261 VPRLSSLKVLSIAHNQF 277
L +++ + +A N F
Sbjct: 334 FSALRAIQTMHLAQNPF 350
Score = 140 (54.3 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 38/131 (29%), Positives = 67/131 (51%)
Query: 148 LGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTL 207
L L NN +V+ + + P L +++LS+N++ +E +F+G S +N + L+ N+L +
Sbjct: 448 LRLNNNEFTVLEATGIFKKLPQLRKINLSNNKITDIEEGAFEGASGVNEILLTSNRLENV 507
Query: 208 SQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSL 267
L +L+ L L+ NR++ + GL SV L L N + + P L SL
Sbjct: 508 QHKMFKGLESLKTLMLRSNRISCVGNDSFTGLGSVRLLSLYDNQIT-TVAPGAFGTLHSL 566
Query: 268 KVLSIAHNQFS 278
L++ N F+
Sbjct: 567 STLNLLANPFN 577
Score = 137 (53.3 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 42/126 (33%), Positives = 63/126 (50%)
Query: 226 NRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKV--LSIAHNQFSSVRRG 283
N+++ A Q L+ + L L+ N L L P + L + K+ L ++ NQ ++ R
Sbjct: 3 NKISTIERGAFQDLKELERLRLNRNNLQ--LFPELL-FLGTAKLYRLDLSENQIQAIPRK 59
Query: 284 ALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLD 343
A G + +L +NQI +ED +FRAL L L L +N I +S AS H+ L T
Sbjct: 60 AFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFR 119
Query: 344 LSHNFL 349
L N L
Sbjct: 120 LHSNNL 125
Score = 129 (50.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 79/305 (25%), Positives = 127/305 (41%)
Query: 84 ISESLRGLEPD-ERVSLLDCTLSNVTVLPGK-FLEGVTLHGLVISSGELKNISDGAFIGL 141
IS RG D + + L +N+ + P FL L+ L +S +++ I AF G
Sbjct: 5 ISTIERGAFQDLKELERLRLNRNNLQLFPELLFLGTAKLYRLDLSENQIQAIPRKAFRG- 63
Query: 142 SSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSY 201
+ ++ L L N +S + A L +L+ L L++N + +L SF + L L
Sbjct: 64 AVDIKNLQLDYNQISCIEDGAFRALR-DLEVLTLNNNNITRLSVASFNHMPKLRTFRLHS 122
Query: 202 NKLMTLSQDC-LAPLVT-LRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPS 259
N L DC LA L LR G + L+G +V ++ + +GP
Sbjct: 123 NNLYC---DCHLAWLSDWLRQRPRVGLYTQCMGPSHLRG-HNVAEVQKREFVCSGPEKSH 178
Query: 260 T---VPRLSSLK--VLSIAHNQFSSVRRGALAGL-----DKLTSLSCHHNQIDVLEDHSF 309
P S L + N R L + + +T + N I V+ +F
Sbjct: 179 QSFMAPSCSVLHCPIACTCSNNIVDCRGKGLTEIPTNLPETITEIRLEQNSIRVIPPGAF 238
Query: 310 RALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLD 369
L LDL++N+I ++ + L +L +L L N + L + L L SLQ L L+
Sbjct: 239 SPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLN 298
Query: 370 DNDIS 374
N I+
Sbjct: 299 ANKIN 303
Score = 124 (48.7 bits), Expect = 3.0e-14, Sum P(3) = 3.0e-14
Identities = 39/124 (31%), Positives = 56/124 (45%)
Query: 129 ELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSF 188
++ I GAF L L+ L L N L + P A L RLDLS NQ+ + +F
Sbjct: 4 KISTIERGAFQDLKE-LERLRLNRNNLQLFPELLFLGTA-KLYRLDLSENQIQAIPRKAF 61
Query: 189 KGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDL- 247
+G + L L YN++ + L L VL L N +T VA+ + + L
Sbjct: 62 RGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFRLH 121
Query: 248 SHNL 251
S+NL
Sbjct: 122 SNNL 125
Score = 122 (48.0 bits), Expect = 3.0e-14, Sum P(3) = 3.0e-14
Identities = 36/131 (27%), Positives = 61/131 (46%)
Query: 241 SVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQ 300
++T++ L N + + P L+ L +++NQ S + A GL L SL + N+
Sbjct: 219 TITEIRLEQNSIR-VIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNK 277
Query: 301 IDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPL 360
I L F L +L L L N+I + + L NL L L N L+ + + + L
Sbjct: 278 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTFSAL 337
Query: 361 KSLQELRLDDN 371
+++Q + L N
Sbjct: 338 RAIQTMHLAQN 348
Score = 117 (46.2 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 69/318 (21%), Positives = 134/318 (42%)
Query: 93 PDERVSLLDCTLSNVTVLPGKFLEGV-TLHGLVISSGELKNISDGAFIGLSSPLQALGLP 151
P +++ LD + + ++ L +G+ +L+ LV+ ++ + F GL S LQ L L
Sbjct: 240 PYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFS-LQLLLLN 298
Query: 152 NNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDC 211
N ++ + A L NL+ L L N+L + +F L ++ + L+ N + DC
Sbjct: 299 ANKINCLRVDAFQDLH-NLNLLSLYDNKLQTVAKGTFSALRAIQTMHLAQNPFIC---DC 354
Query: 212 ----LAPLVTLRVLRLQGNRLT---------VSVVAALQGLRSVTDLDLSHNLLAGPLGP 258
LA + + G R T + + + + S T+ D L
Sbjct: 355 HLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCSGTE-DYRSKLSGDCFAD 413
Query: 259 STVPRLSSLKVLSIAHNQFSSVRRGALAG-LDKLTS-LSCHHNQIDVLEDHS-FRALSTL 315
P + ++ S+ + + + + T+ L ++N+ VLE F+ L L
Sbjct: 414 LACPEKCRCEGTTV---DCSNQKLNKIPDHIPQYTAELRLNNNEFTVLEATGIFKKLPQL 470
Query: 316 SHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISM 375
++L++N+I + + S + + L+ N L + + L+SL+ L L N IS
Sbjct: 471 RKINLSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRISC 530
Query: 376 EPECIYVGFNTMDLELIY 393
+ G ++ L +Y
Sbjct: 531 VGNDSFTGLGSVRLLSLY 548
Score = 113 (44.8 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 26/100 (26%), Positives = 50/100 (50%)
Query: 275 NQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLA 334
N+ S++ RGA L +L L + N + + + F + L LDL+ N+I A+ +
Sbjct: 3 NKISTIERGAFQDLKELERLRLNRNNLQLFPELLFLGTAKLYRLDLSENQIQAIPRKAFR 62
Query: 335 HLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 374
++ L L +N + + L+ L+ L L++N+I+
Sbjct: 63 GAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNIT 102
Score = 101 (40.6 bits), Expect = 4.1e-12, Sum P(3) = 4.1e-12
Identities = 32/116 (27%), Positives = 53/116 (45%)
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 317
P+ +P ++ + + N + GA + KL L +NQI L +F+ L +L+
Sbjct: 213 PTNLPE--TITEIRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNS 270
Query: 318 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 373
L L N+I + + L +L L L+ N + L D L +L L L DN +
Sbjct: 271 LVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKL 326
Score = 74 (31.1 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 28/96 (29%), Positives = 47/96 (48%)
Query: 308 SFRALS-TLSHLDLA---HNRIVAVSGASLAHL-SNL----TTLDLSHNFLRALTQDLIT 358
SF A S ++ H +A N IV G L + +NL T + L N +R + +
Sbjct: 180 SFMAPSCSVLHCPIACTCSNNIVDCRGKGLTEIPTNLPETITEIRLEQNSIRVIPPGAFS 239
Query: 359 PLKSLQELRLDDNDIS-MEPECIYVGFNTMDLELIY 393
P K L+ L L +N IS + P+ + G +++ ++Y
Sbjct: 240 PYKKLRRLDLSNNQISELAPDA-FQGLRSLNSLVLY 274
Score = 66 (28.3 bits), Expect = 3.0e-14, Sum P(3) = 3.0e-14
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L SLK L + N+ S V + GL + LS + NQI + +F +
Sbjct: 515 LESLKTLMLRSNRISCVGNDSFTGLGSVRLLSLYDNQITTVAPGAFGTL 563
Score = 65 (27.9 bits), Expect = 3.8e-14, Sum P(3) = 3.8e-14
Identities = 15/77 (19%), Positives = 39/77 (50%)
Query: 618 VAQQEDDINRNNSDSRYVKLQATTIL--LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLS 675
+ Q ++ NN++ + L+AT I L L+ +++++N+ + + GA G + +
Sbjct: 441 IPQYTAELRLNNNE--FTVLEATGIFKKLPQLRKINLSNNKITDIEEGAFEGASGVNEIL 498
Query: 676 CHHNQIDVLEDHSFSNV 692
N+++ ++ F +
Sbjct: 499 LTSNRLENVQHKMFKGL 515
Score = 57 (25.1 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 647 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L+ L +++NQ S + A GL L SL + N+I L F +
Sbjct: 244 LRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGL 289
Score = 55 (24.4 bits), Expect = 4.0e-13, Sum P(3) = 4.0e-13
Identities = 12/32 (37%), Positives = 21/32 (65%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLS 675
L S+++LS+ NQ ++V GA L L++L+
Sbjct: 539 LGSVRLLSLYDNQITTVAPGAFGTLHSLSTLN 570
Score = 53 (23.7 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFS 690
L SL++L + N+ + +R A L L LS + N++ + +FS
Sbjct: 289 LFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTFS 335
Score = 51 (23.0 bits), Expect = 1.0e-12, Sum P(3) = 1.0e-12
Identities = 11/48 (22%), Positives = 24/48 (50%)
Query: 645 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
S + + + N+ +V+ GL+ L +L N+I + + SF+ +
Sbjct: 492 SGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFTGL 539
Score = 46 (21.3 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 13/52 (25%), Positives = 22/52 (42%)
Query: 641 TILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
T L ++ + + N + GA + KL L +NQI L +F +
Sbjct: 214 TNLPETITEIRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGL 265
Score = 44 (20.5 bits), Expect = 5.2e-12, Sum P(3) = 5.2e-12
Identities = 11/46 (23%), Positives = 24/46 (52%)
Query: 650 LSIAHNQFSSVRR-GALAGLDKLTSLSCHHNQIDVLEDHSFSNVIG 694
L + +N+F+ + G L +L ++ +N+I +E+ +F G
Sbjct: 448 LRLNNNEFTVLEATGIFKKLPQLRKINLSNNKITDIEEGAFEGASG 493
Score = 44 (20.5 bits), Expect = 3.5e-07, Sum P(3) = 3.5e-07
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L SL L + N+ + + + GL L L + N+I+ L +F ++
Sbjct: 265 LRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDL 313
>UNIPROTKB|Q2KIF2 [details] [associations]
symbol:LRG1 "Leucine-rich alpha-2-glycoprotein 1"
species:9913 "Bos taurus" [GO:0050873 "brown fat cell
differentiation" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
GO:GO:0005615 CTD:116844 eggNOG:COG4886 HOGENOM:HOG000234378
HOVERGEN:HBG000045 OMA:RCAGPEA OrthoDB:EOG4TMR2P GO:GO:0050873
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GeneTree:ENSGT00690000102197 EMBL:DAAA02019605 EMBL:BC112660
IPI:IPI00702820 RefSeq:NP_001039642.1 UniGene:Bt.53757
Ensembl:ENSBTAT00000003618 GeneID:514663 KEGG:bta:514663
InParanoid:Q2KIF2 NextBio:20871452 Uniprot:Q2KIF2
Length = 346
Score = 209 (78.6 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 91/298 (30%), Positives = 134/298 (44%)
Query: 93 PDERVSLL--DCTLSNVTVLPGKFL---EGVTLHG---LVISSGELKNIS--DGAFIGLS 142
P+ + SL+ D LS + +L F+ +G+T + LV SS +IS A I S
Sbjct: 6 PERKQSLVGWDSHLSRIFLLL-LFVVSAQGLTPNPEACLVFSSVNGSSISCQPPAQIPHS 64
Query: 143 SPLQALGLPNNL--LSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLS 200
P + L L+ +P L + PNL L LS N+L + L LDL+
Sbjct: 65 LPADTIFLAVEFFNLTQLPADFLQGV-PNLQELHLSSNRLEDFSPKFLLPVPQLKVLDLT 123
Query: 201 YNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPST 260
N L L L L L+GN+L + L GL+++ LDLS N L L P
Sbjct: 124 RNSLTGLFPGFFRVSAALCTLVLKGNQLKFLEASWLHGLKALRHLDLSENQLHS-LPPGL 182
Query: 261 VPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 320
+ + L L +++NQ ++ L G L L N++ VL + L +L L
Sbjct: 183 LENFTDLLTLDLSNNQLQTLPPDLLRGPLNLERLHLEGNRLQVLGEGLLAPQPKLRYLFL 242
Query: 321 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPL-KSLQELRLDDNDISMEP 377
NR+ +V+ + L L LDLS+N L + L T L K+ + L+ D DIS P
Sbjct: 243 NDNRLASVAAGAFRGLQKLDMLDLSNNLLTTVPTGLWTSLGKAARNLK-DGFDISNNP 299
Score = 191 (72.3 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 62/169 (36%), Positives = 84/169 (49%)
Query: 91 LEPDERVSLLDCTLSNVTVL-PGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALG 149
L P ++ +LD T +++T L PG F L LV+ +LK + GL + L+ L
Sbjct: 111 LLPVPQLKVLDLTRNSLTGLFPGFFRVSAALCTLVLKGNQLKFLEASWLHGLKA-LRHLD 169
Query: 150 LPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQ 209
L N L +P L +L LDLS+NQL L +G +L L L N+L L +
Sbjct: 170 LSENQLHSLPPGLLENFT-DLLTLDLSNNQLQTLPPDLLRGPLNLERLHLEGNRLQVLGE 228
Query: 210 DCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAG-PLG 257
LAP LR L L NRL A +GL+ + LDLS+NLL P G
Sbjct: 229 GLLAPQPKLRYLFLNDNRLASVAAGAFRGLQKLDMLDLSNNLLTTVPTG 277
Score = 165 (63.1 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 50/171 (29%), Positives = 83/171 (48%)
Query: 236 LQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLS 295
LQG+ ++ +L LS N L P + + LKVL + N + + G L +L
Sbjct: 87 LQGVPNLQELHLSSNRLED-FSPKFLLPVPQLKVLDLTRNSLTGLFPGFFRVSAALCTLV 145
Query: 296 CHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQD 355
NQ+ LE L L HLDL+ N++ ++ L + ++L TLDLS+N L+ L D
Sbjct: 146 LKGNQLKFLEASWLHGLKALRHLDLSENQLHSLPPGLLENFTDLLTLDLSNNQLQTLPPD 205
Query: 356 LITPLKSLQELRLDDNDISM--------EPECIYVGFNTMDLELIYSGVWR 398
L+ +L+ L L+ N + + +P+ Y+ N L + +G +R
Sbjct: 206 LLRGPLNLERLHLEGNRLQVLGEGLLAPQPKLRYLFLNDNRLASVAAGAFR 256
Score = 149 (57.5 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 55/194 (28%), Positives = 83/194 (42%)
Query: 196 FLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGP 255
FL + + L L D L + L+ L L NRL L + + LDL+ N L G
Sbjct: 71 FLAVEFFNLTQLPADFLQGVPNLQELHLSSNRLEDFSPKFLLPVPQLKVLDLTRNSLTG- 129
Query: 256 LGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTL 315
L P ++L L + NQ + L GL L L NQ+ L + L
Sbjct: 130 LFPGFFRVSAALCTLVLKGNQLKFLEASWLHGLKALRHLDLSENQLHSLPPGLLENFTDL 189
Query: 316 SHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISM 375
LDL++N++ + L NL L L N L+ L + L+ P L+ L L+DN ++
Sbjct: 190 LTLDLSNNQLQTLPPDLLRGPLNLERLHLEGNRLQVLGEGLLAPQPKLRYLFLNDNRLAS 249
Query: 376 EPECIYVGFNTMDL 389
+ G +D+
Sbjct: 250 VAAGAFRGLQKLDM 263
>UNIPROTKB|F1P2C4 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0050770 "regulation of axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026878
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 PANTHER:PTHR24369:SF8
EMBL:AADN02033191 EMBL:AADN02033192 EMBL:AADN02033193
EMBL:AADN02033194 EMBL:AADN02033195 EMBL:AADN02033196
EMBL:AADN02033197 EMBL:AADN02033198 EMBL:AADN02033199
EMBL:AADN02033200 EMBL:AADN02033201 EMBL:AADN02033202
EMBL:AADN02033203 EMBL:AADN02033204 EMBL:AADN02033205
EMBL:AADN02033206 EMBL:AADN02033207 EMBL:AADN02033208
EMBL:AADN02033209 EMBL:AADN02033210 EMBL:AADN02033211
EMBL:AADN02033212 EMBL:AADN02033213 EMBL:AADN02033214
EMBL:AADN02033215 EMBL:AADN02033216 EMBL:AADN02033217
EMBL:AADN02033218 EMBL:AADN02033219 EMBL:AADN02033220
EMBL:AADN02033221 EMBL:AADN02033222 EMBL:AADN02033223
EMBL:AADN02033224 IPI:IPI00823432 Ensembl:ENSGALT00000038578
ArrayExpress:F1P2C4 Uniprot:F1P2C4
Length = 423
Score = 212 (79.7 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 67/241 (27%), Positives = 113/241 (46%)
Query: 131 KNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKG 190
KN+ D G+S+ + L L N + ++ ++ L +L+ L LS N + +E +F G
Sbjct: 42 KNLRDVPD-GISTNTRLLNLHENQIQIIKVNSFKHLR-HLEILQLSRNHIRTIEIGAFNG 99
Query: 191 LSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHN 250
L++LN L+L N+L T+ L L+ L L+ N + A + S+ LDL
Sbjct: 100 LANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGEL 159
Query: 251 LLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFR 310
+ LS+L+ L++A + L L KL L N + + SF+
Sbjct: 160 KRLSYISEGAFEGLSNLRYLNLAMCNLREIPN--LTPLVKLDELDLSGNHLTAIRPGSFQ 217
Query: 311 ALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDD 370
L L L + ++I + + +L +L ++L+HN L L DL TPL+ L+ + L
Sbjct: 218 GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLR-LERIHLHH 276
Query: 371 N 371
N
Sbjct: 277 N 277
Score = 183 (69.5 bits), Expect = 5.7e-11, P = 5.7e-11
Identities = 61/205 (29%), Positives = 101/205 (49%)
Query: 97 VSLLDCTLSNV-TVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLL 155
+ +L + +++ T+ G F L+ L + L I +GAF+ LS L+ L L NN +
Sbjct: 79 LEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSK-LKELWLRNNPI 137
Query: 156 SVVPTSALAPLAPNLDRLDLSH-NQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAP 214
+P+ A + P+L RLDL +L + +F+GLS+L +L+L+ L + L P
Sbjct: 138 ESIPSYAFNRI-PSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPN--LTP 194
Query: 215 LVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAH 274
LV L L L GN LT + QGL + L + + + + + L SL +++AH
Sbjct: 195 LVKLDELDLSGNHLTAIRPGSFQGLMHLQKLWMIQSQIQ-VIERNAFDNLQSLVEINLAH 253
Query: 275 NQFSSVRRGALAGLDKLTSLSCHHN 299
N + + L +L + HHN
Sbjct: 254 NNLTLLPHDLFTPL-RLERIHLHHN 277
Score = 176 (67.0 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 64/230 (27%), Positives = 105/230 (45%)
Query: 166 LAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQG 225
++ N L+L NQ+ ++ SFK L L L LS N + T+ L L L L
Sbjct: 51 ISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFD 110
Query: 226 NRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPS-TVPRLSSLKVLSIAH-NQFSSVRRG 283
NRLT A L + +L L +N + PS R+ SL+ L + + S + G
Sbjct: 111 NRLTTIPNGAFVYLSKLKELWLRNNPIESI--PSYAFNRIPSLRRLDLGELKRLSYISEG 168
Query: 284 ALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLD 343
A GL L L+ ++ E + L L LDL+ N + A+ S L +L L
Sbjct: 169 AFEGLSNLRYLNLA--MCNLREIPNLTPLVKLDELDLSGNHLTAIRPGSFQGLMHLQKLW 226
Query: 344 LSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELIY 393
+ + ++ + ++ L+SL E+ L N++++ P + F + LE I+
Sbjct: 227 MIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDL---FTPLRLERIH 273
Score = 116 (45.9 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 38/110 (34%), Positives = 53/110 (48%)
Query: 275 NQFSSV---R---RGALAGLDKLTSL-SCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVA 327
NQFS V R R G+ T L + H NQI +++ +SF+ L L L L+ N I
Sbjct: 32 NQFSKVICVRKNLRDVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRT 91
Query: 328 VSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEP 377
+ + L+NL TL+L N L + L L+EL L +N I P
Sbjct: 92 IEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIP 141
Score = 106 (42.4 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 37/139 (26%), Positives = 62/139 (44%)
Query: 250 NLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 309
NL P G ST RL L++ NQ ++ + L L L N I +E +F
Sbjct: 43 NLRDVPDGISTNTRL-----LNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAF 97
Query: 310 RALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLD 369
L+ L+ L+L NR+ + + +LS L L L +N + ++ + SL+ L L
Sbjct: 98 NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG 157
Query: 370 D-NDISMEPECIYVGFNTM 387
+ +S E + G + +
Sbjct: 158 ELKRLSYISEGAFEGLSNL 176
Score = 68 (29.0 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 16/49 (32%), Positives = 27/49 (55%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L L ++ N +++R G+ GL L L +QI V+E ++F N+
Sbjct: 195 LVKLDELDLSGNHLTAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNL 243
Score = 50 (22.7 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 12/47 (25%), Positives = 21/47 (44%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFS 690
L L+ L + +Q + R A L L ++ HN + +L F+
Sbjct: 219 LMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFT 265
>UNIPROTKB|D8MCT0 [details] [associations]
symbol:LGR5 "Leucine-rich repeat-containing G
protein-coupled receptor 5" species:9606 "Homo sapiens" [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0016500 EMBL:AC078860 EMBL:AC090116 HGNC:HGNC:4504
EMBL:FN820440 IPI:IPI00970955 SMR:D8MCT0 Ensembl:ENST00000536515
UCSC:uc021rar.1 Uniprot:D8MCT0
Length = 835
Score = 228 (85.3 bits), Expect = 3.4e-14, Sum P(2) = 3.4e-14
Identities = 95/314 (30%), Positives = 137/314 (43%)
Query: 64 CACDLPHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVT-VLPGKFLEGVTLHG 122
C C+ + + SDL +SE L S LD +++N++ +LP L
Sbjct: 38 CHCEPDGRMLLRVDCSDL-GLSELPSNLSVF--TSYLDLSMNNISQLLPNPLPSLRFLEE 94
Query: 123 LVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYK 182
L ++ L I GAF GL S L+ L L NN L VPT AL L +L L L +N+++
Sbjct: 95 LRLAGNALTYIPKGAFTGLYS-LKVLMLQNNQLRHVPTEALQNLR-SLQSLHLHNNRIHS 152
Query: 183 LENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSV 242
L F GL SL LDL+YN L + L L+ L N + A G S+
Sbjct: 153 LGKKCFDGLHSLETLDLNYNNLDEFPT-AIRTLSNLKELGFHSNNIRSIPEKAFVGNPSL 211
Query: 243 TDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGA-LAGLDKLTSLSCHHNQI 301
+ N + +G S L L+ L++ N S + L G L SL+ QI
Sbjct: 212 ITIHFYDNPIQF-VGRSAFQHLPELRTLTL--NGASQITEFPDLTGTANLESLTLTGAQI 268
Query: 302 DVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLK 361
L L L LDL++N + + S+ L +DL HN + + D L
Sbjct: 269 SSLPQTVCNQLPNLQVLDLSYNLLEDLPSFSVCQ--KLQKIDLRHNEIYEIKVDTFQQLL 326
Query: 362 SLQELRLDDNDISM 375
SL+ L L N I++
Sbjct: 327 SLRSLNLAWNKIAI 340
Score = 187 (70.9 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 72/264 (27%), Positives = 123/264 (46%)
Query: 110 LPGKFLEGV-TLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAP 168
+P + L+ + +L L + + + ++ F GL S L+ L L N L PT A+ L+
Sbjct: 129 VPTEALQNLRSLQSLHLHNNRIHSLGKKCFDGLHS-LETLDLNYNNLDEFPT-AIRTLS- 185
Query: 169 NLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRL 228
NL L N + + +F G SL + N + + + L LR L L G
Sbjct: 186 NLKELGFHSNNIRSIPEKAFVGNPSLITIHFYDNPIQFVGRSAFQHLPELRTLTLNGAS- 244
Query: 229 TVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTV-PRLSSLKVLSIAHNQFSSVRRGALAG 287
++ L G ++ L L+ ++ P TV +L +L+VL +++N + ++
Sbjct: 245 QITEFPDLTGTANLESLTLTGAQISSL--PQTVCNQLPNLQVLDLSYNLLEDLPSFSVC- 301
Query: 288 LDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHN 347
KL + HN+I ++ +F+ L +L L+LA N+I + + + L +L LDLS N
Sbjct: 302 -QKLQKIDLRHNEIYEIKVDTFQQLLSLRSLNLAWNKIAIIHPNAFSTLPSLIKLDLSSN 360
Query: 348 FLRALTQDLITPLKSLQELRLDDN 371
L + IT L L L+L N
Sbjct: 361 LLSSFP---ITGLHGLTHLKLTGN 381
Score = 178 (67.7 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 70/225 (31%), Positives = 98/225 (43%)
Query: 173 LDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSV 232
LDLS N + +L L L L L+ N L + + L +L+VL LQ N+L
Sbjct: 71 LDLSMNNISQLLPNPLPSLRFLEELRLAGNALTYIPKGAFTGLYSLKVLMLQNNQLRHVP 130
Query: 233 VAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLT 292
ALQ LRS+ L L HN LG L SL+ L + +N A+ L L
Sbjct: 131 TEALQNLRSLQSLHL-HNNRIHSLGKKCFDGLHSLETLDLNYNNLDEFPT-AIRTLSNLK 188
Query: 293 SLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRAL 352
L H N I + + +F +L + N I V ++ HL L TL L N +
Sbjct: 189 ELGFHSNNIRSIPEKAFVGNPSLITIHFYDNPIQFVGRSAFQHLPELRTLTL--NGASQI 246
Query: 353 TQ--DLITPLKSLQELRLDDNDISMEPECIYVGF-NTMDLELIYS 394
T+ DL T +L+ L L IS P+ + N L+L Y+
Sbjct: 247 TEFPDL-TGTANLESLTLTGAQISSLPQTVCNQLPNLQVLDLSYN 290
Score = 142 (55.0 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 49/179 (27%), Positives = 87/179 (48%)
Query: 93 PDERVSLLDCTLSNVTVLPGKFLEGVT-LHGLVISSGELKNISDGAFIGLSSPLQALGLP 151
P+ R L+ S +T P L G L L ++ ++ ++ L + LQ L L
Sbjct: 233 PELRTLTLNGA-SQITEFPD--LTGTANLESLTLTGAQISSLPQTVCNQLPN-LQVLDLS 288
Query: 152 NNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDC 211
NLL +P+ ++ L ++DL HN++Y+++ +F+ L SL L+L++NK+ + +
Sbjct: 289 YNLLEDLPSFSVCQ---KLQKIDLRHNEIYEIKVDTFQQLLSLRSLNLAWNKIAIIHPNA 345
Query: 212 LAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHN-LLAGPLGPSTVPRLSSLKV 269
+ L +L L L N L+ + L GL T L L+ N L + P L +++
Sbjct: 346 FSTLPSLIKLDLSSNLLSSFPITGLHGL---THLKLTGNHALQSLISSENFPELKVIEM 401
Score = 51 (23.0 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 11/46 (23%), Positives = 24/46 (52%)
Query: 647 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L+ + + HN+ ++ L L SL+ N+I ++ ++FS +
Sbjct: 304 LQKIDLRHNEIYEIKVDTFQQLLSLRSLNLAWNKIAIIHPNAFSTL 349
Score = 37 (18.1 bits), Expect = 3.4e-14, Sum P(2) = 3.4e-14
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 642 ILLSSLKVLS---IAHNQFSSVRRGALAGLDKLT 672
+ +S +K+L A N + V LAG+D T
Sbjct: 515 LYISPIKLLIGVIAAVNMLTGVSSAVLAGVDAFT 548
Score = 37 (18.1 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 17/49 (34%), Positives = 22/49 (44%)
Query: 251 LLAGPLGPSTVPR----LSSLKVLS---IAHNQFSSVRRGALAGLDKLT 292
L L STV R +S +K+L A N + V LAG+D T
Sbjct: 500 LTCNALVTSTVFRSPLYISPIKLLIGVIAAVNMLTGVSSAVLAGVDAFT 548
>MGI|MGI:1315202 [details] [associations]
symbol:Slit3 "slit homolog 3 (Drosophila)" species:10090
"Mus musculus" [GO:0005102 "receptor binding" evidence=TAS]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO;IDA] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0007411
"axon guidance" evidence=ISO;IDA] [GO:0008285 "negative regulation
of cell proliferation" evidence=IGI] [GO:0009887 "organ
morphogenesis" evidence=IGI;IMP] [GO:0010629 "negative regulation
of gene expression" evidence=IGI] [GO:0016020 "membrane"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0035385 "Roundabout signaling pathway" evidence=ISO]
[GO:0048495 "Roundabout binding" evidence=ISO] [GO:0048846 "axon
extension involved in axon guidance" evidence=ISO] [GO:0050919
"negative chemotaxis" evidence=ISO] [GO:0070100 "negative
regulation of chemokine-mediated signaling pathway" evidence=ISO]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
MGI:MGI:1315202 GO:GO:0005739 GO:GO:0007411 GO:GO:0008285
GO:GO:0005615 GO:GO:0007420 GO:GO:0030308 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005102 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186 GO:GO:0032870
GO:GO:0010629 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661 Pfam:PF01463
GO:GO:0051414 GeneTree:ENSGT00700000104083 GO:GO:0050919
GO:GO:0035385 GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T CTD:6586 KO:K06850 ChiTaRS:SLIT3 EMBL:AF144629
EMBL:AL669839 EMBL:AL669856 EMBL:AL731688 EMBL:AL732401
EMBL:AL732630 IPI:IPI00664551 RefSeq:NP_035542.2 UniGene:Mm.478604
ProteinModelPortal:Q9WVB4 SMR:Q9WVB4 STRING:Q9WVB4
PhosphoSite:Q9WVB4 PRIDE:Q9WVB4 Ensembl:ENSMUST00000069837
GeneID:20564 KEGG:mmu:20564 InParanoid:B1ATW4 OMA:SVDCHGL
NextBio:298861 Bgee:Q9WVB4 CleanEx:MM_SLIT3 Genevestigator:Q9WVB4
GermOnline:ENSMUSG00000056427 Uniprot:Q9WVB4
Length = 1523
Score = 170 (64.9 bits), Expect = 5.9e-11, Sum P(2) = 5.9e-11
Identities = 51/156 (32%), Positives = 79/156 (50%)
Query: 197 LDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHN---LLA 253
LDL N + +++ A L LRVL L+ N++++ A Q L+ + L L+ N +L
Sbjct: 66 LDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSIIERGAFQDLKQLERLRLNKNKLQVLP 125
Query: 254 GPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALS 313
L ST P+L+ L ++ NQ + R A G+ + +L +N I +ED +FRAL
Sbjct: 126 ELLFQST-PKLTRL---DLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALR 181
Query: 314 TLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFL 349
L L L +N I + S H+ + TL L N L
Sbjct: 182 DLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHL 217
Score = 165 (63.1 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 82/311 (26%), Positives = 131/311 (42%)
Query: 84 ISESLRGLEPDERVSL--LDCTLSNVTVLP-GKFLEGVTLHGLVISSGELKNISDGAFIG 140
I+E +GL D VSL L + + L F + L+ L + +L+ IS G F+
Sbjct: 367 ITEIPKGLF-DGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFVP 425
Query: 141 LSSPLQALGLPNN-LLSVVPTSALAP-LAPN-LDRLDLSHNQLYKLENTSFKGLSSLNF- 196
L S +Q L L N + LA L N ++ + +L N + S F
Sbjct: 426 LQS-IQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFR 484
Query: 197 LDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVS--VVAALQGL--RSVTDLDLSHNLL 252
S + S +C LV R +G + S +A + TDL L+ N +
Sbjct: 485 CSGSEDYRNRFSSECFMDLVCPEKCRCEGTIVDCSNQKLARIPSHLPEYTTDLRLNDNDI 544
Query: 253 AGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRAL 312
+ +L +L+ +++++N+ VR GA G + L NQ++ + FR L
Sbjct: 545 SVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRGL 604
Query: 313 STLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDND 372
S+L L L N I VS + A LS++ L L N + +T T L SL + L N
Sbjct: 605 SSLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNP 664
Query: 373 ISMEPECIYVG 383
+ ++G
Sbjct: 665 FNCNCHMAWLG 675
Score = 159 (61.0 bits), Expect = 9.0e-10, Sum P(2) = 9.0e-10
Identities = 49/170 (28%), Positives = 76/170 (44%)
Query: 169 NLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRL 228
N +RLDL N + ++ F GL +L L L N++ + + L L LRL N+L
Sbjct: 62 NAERLDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSIIERGAFQDLKQLERLRLNKNKL 121
Query: 229 TVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGL 288
V Q +T LDLS N + G + ++ +K L + +N S + GA L
Sbjct: 122 QVLPELLFQSTPKLTRLDLSENQIQG-IPRKAFRGVTGVKNLQLDNNHISCIEDGAFRAL 180
Query: 289 DKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSN 338
L L+ ++N I + SF + + L L N + LA LS+
Sbjct: 181 RDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYC--DCHLAWLSD 228
Score = 152 (58.6 bits), Expect = 5.0e-09, Sum P(2) = 5.0e-09
Identities = 43/155 (27%), Positives = 76/155 (49%)
Query: 234 AALQGL-RSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLT 292
A +G+ R+ LDL N + + L +L+VL + NQ S + RGA L +L
Sbjct: 54 AVPRGIPRNAERLDLDRNNITR-ITKMDFAGLKNLRVLHLEDNQVSIIERGAFQDLKQLE 112
Query: 293 SLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRAL 352
L + N++ VL + F++ L+ LDL+ N+I + + ++ + L L +N + +
Sbjct: 113 RLRLNKNKLQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCI 172
Query: 353 TQDLITPLKSLQELRLDDNDISMEPECIYVGFNTM 387
L+ L+ L L++N+IS + FN M
Sbjct: 173 EDGAFRALRDLEILTLNNNNIS---RILVTSFNHM 204
Score = 150 (57.9 bits), Expect = 3.5e-14, Sum P(3) = 3.5e-14
Identities = 53/191 (27%), Positives = 82/191 (42%)
Query: 65 ACDLPHTLRCTANKSDLYAISESL--RGLEPDERVSLLDCTLSNVTVLPGKFLEGV-TLH 121
AC P C+A D + + RG+ P LD +N+T + G+ L
Sbjct: 33 AC--PTKCTCSAASVDCHGLGLRAVPRGI-P-RNAERLDLDRNNITRITKMDFAGLKNLR 88
Query: 122 GLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLY 181
L + ++ I GAF L L+ L L N L V+P L P L RLDLS NQ+
Sbjct: 89 VLHLEDNQVSIIERGAFQDLKQ-LERLRLNKNKLQVLP-ELLFQSTPKLTRLDLSENQIQ 146
Query: 182 KLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRS 241
+ +F+G++ + L L N + + L L +L L N ++ +V + +
Sbjct: 147 GIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMPK 206
Query: 242 VTDLDLSHNLL 252
+ L L N L
Sbjct: 207 IRTLRLHSNHL 217
Score = 143 (55.4 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 47/153 (30%), Positives = 72/153 (47%)
Query: 220 VLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAG-PLGPSTVPRLSSLKVLSIAHNQFS 278
++ +G LT + A L + ++ L N + P G T + LK + I+ NQ S
Sbjct: 290 IVDCRGKGLT-EIPANLP--EGIVEIRLEQNSIKSIPAGAFT--QYKKLKRIDISKNQIS 344
Query: 279 SVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSN 338
+ A GL LTSL + N+I + F L +L L L N+I + + L N
Sbjct: 345 DIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQN 404
Query: 339 LTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
L L L N L+ +++ L PL+S+Q L L N
Sbjct: 405 LNLLSLYDNKLQTISKGLFVPLQSIQTLHLAQN 437
Score = 133 (51.9 bits), Expect = 2.4e-10, Sum P(3) = 2.4e-10
Identities = 40/128 (31%), Positives = 62/128 (48%)
Query: 150 LPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQ 209
L N + +P A L R+D+S NQ+ + +F+GL SL L L NK+ + +
Sbjct: 314 LEQNSIKSIPAGAFTQYK-KLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPK 372
Query: 210 DCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKV 269
LV+L++L L N++ V Q L+++ L L N L VP L S++
Sbjct: 373 GLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFVP-LQSIQT 431
Query: 270 LSIAHNQF 277
L +A N F
Sbjct: 432 LHLAQNPF 439
Score = 133 (51.9 bits), Expect = 0.00010, P = 0.00010
Identities = 37/103 (35%), Positives = 55/103 (53%)
Query: 221 LRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSV 280
L L+GN LT +V L R +T +DLS+N ++ L T +S L L +++N+ +
Sbjct: 757 LYLEGNHLT-AVPKELSAFRQLTLIDLSNNSIS-MLTNHTFSNMSHLSTLILSYNRLRCI 814
Query: 281 RRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 323
A GL L L+ H N I + + SF L++LSHL L N
Sbjct: 815 PVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTN 857
Score = 127 (49.8 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 67/299 (22%), Positives = 123/299 (41%)
Query: 105 SNVTVLP-GKFLEGVTLHGLVISSGELKNISDGAFIGLSSP-LQALGLPNNLLSVVPTSA 162
+ V+++ G F + L L ++ +L+ + + F S+P L L L N + +P A
Sbjct: 95 NQVSIIERGAFQDLKQLERLRLNKNKLQVLPELLF--QSTPKLTRLDLSENQIQGIPRKA 152
Query: 163 LAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLR 222
+ + L L +N + +E+ +F+ L L L L+ N + + + +R LR
Sbjct: 153 FRGVT-GVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMPKIRTLR 211
Query: 223 LQGNRLTVSV-VAALQG-LRSVTDLDLSHNLLAGPL---GPSTVPRLSSLKVLSIAHNQF 277
L N L +A L LR + L P+ G S V H++
Sbjct: 212 LHSNHLYCDCHLAWLSDWLRQRRTIG-QFTLCMAPVHLRGFSVADVQKKEYVCPGPHSEA 270
Query: 278 SSVRRGALAGLDKLTSLSCHHNQIDV----LEDHSFRALSTLSHLDLAHNRIVAVSGASL 333
+ +L+ ++ SC +N +D L + + + L N I ++ +
Sbjct: 271 PACNANSLSCP---SACSCSNNIVDCRGKGLTEIPANLPEGIVEIRLEQNSIKSIPAGAF 327
Query: 334 AHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELI 392
L +D+S N + + D LKSL L L N I+ P+ ++ G ++ L L+
Sbjct: 328 TQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLL 386
Score = 124 (48.7 bits), Expect = 0.00097, P = 0.00097
Identities = 38/113 (33%), Positives = 55/113 (48%)
Query: 140 GLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDL 199
G+ + L L N L+ VP A L +DLS+N + L N +F +S L+ L L
Sbjct: 749 GMPKDVTELYLEGNHLTAVPKELSA--FRQLTLIDLSNNSISMLTNHTFSNMSHLSTLIL 806
Query: 200 SYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLL 252
SYN+L + L +LRVL L GN ++ + L S++ L L N L
Sbjct: 807 SYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPL 859
Score = 114 (45.2 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 35/95 (36%), Positives = 55/95 (57%)
Query: 287 GLDK-LTSLSCHHNQIDVL--EDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLD 343
G+ K +T L N + + E +FR L TL +DL++N I ++ + +++S+L+TL
Sbjct: 749 GMPKDVTELYLEGNHLTAVPKELSAFRQL-TL--IDLSNNSISMLTNHTFSNMSHLSTLI 805
Query: 344 LSHNFLRALTQDLITPLKSLQELRLDDNDISMEPE 378
LS+N LR + L+SL+ L L NDIS PE
Sbjct: 806 LSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPE 840
Score = 103 (41.3 bits), Expect = 6.5e-12, Sum P(2) = 6.5e-12
Identities = 31/116 (26%), Positives = 57/116 (49%)
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 317
P +P+ + L + N ++V + L+ +LT + +N I +L +H+F +S LS
Sbjct: 747 PKGMPK--DVTELYLEGNHLTAVPK-ELSAFRQLTLIDLSNNSISMLTNHTFSNMSHLST 803
Query: 318 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 373
L L++NR+ + + L +L L L N + ++ + L SL L L N +
Sbjct: 804 LILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPL 859
Score = 99 (39.9 bits), Expect = 3.5e-14, Sum P(3) = 3.5e-14
Identities = 31/125 (24%), Positives = 55/125 (44%)
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 317
P+ +P + + + N S+ GA KL + NQI + +F+ L +L+
Sbjct: 302 PANLPE--GIVEIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTS 359
Query: 318 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEP 377
L L N+I + L +L L L+ N + L + L++L L L DN +
Sbjct: 360 LVLYGNKITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTIS 419
Query: 378 ECIYV 382
+ ++V
Sbjct: 420 KGLFV 424
Score = 93 (37.8 bits), Expect = 3.8e-12, Sum P(3) = 3.8e-12
Identities = 34/126 (26%), Positives = 58/126 (46%)
Query: 292 TSLSCHHNQIDVLEDHS-FRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLR 350
T L + N I VLE F+ L L ++L++NRI V + + + L L+ N L
Sbjct: 535 TDLRLNDNDISVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLE 594
Query: 351 ALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELIYSGVWRHSTLLIPVMLSL 410
+ + L SL+ L L N IS + G +++ L +Y R +T+ +L
Sbjct: 595 TMHGRMFRGLSSLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDN--RITTITPGAFTTL 652
Query: 411 CTRSSV 416
+ S++
Sbjct: 653 VSLSTI 658
Score = 73 (30.8 bits), Expect = 3.5e-14, Sum P(3) = 3.5e-14
Identities = 17/50 (34%), Positives = 26/50 (52%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNVI 693
LSSLK L + N S V AGL + LS + N+I + +F+ ++
Sbjct: 604 LSSLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLV 653
Score = 70 (29.7 bits), Expect = 7.1e-14, Sum P(3) = 7.1e-14
Identities = 19/68 (27%), Positives = 35/68 (51%)
Query: 624 DINRNNSDSRYVKLQATTIL--LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
D+ N++D L+AT I L +L+ +++++N+ VR GA G + L NQ+
Sbjct: 536 DLRLNDNDISV--LEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQL 593
Query: 682 DVLEDHSF 689
+ + F
Sbjct: 594 ETMHGRMF 601
Score = 66 (28.3 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 647 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNVI 693
LK + I+ NQ S + A GL LTSL + N+I + F ++
Sbjct: 333 LKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLV 379
Score = 63 (27.2 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 20/73 (27%), Positives = 33/73 (45%)
Query: 315 LSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 374
++ L L N + AV L+ LT +DLS+N + LT + + L L L N +
Sbjct: 754 VTELYLEGNHLTAVP-KELSAFRQLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNRLR 812
Query: 375 MEPECIYVGFNTM 387
P + G ++
Sbjct: 813 CIPVHAFNGLRSL 825
Score = 59 (25.8 bits), Expect = 9.4e-13, Sum P(3) = 9.4e-13
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
+S L L +++N+ + A GL L L+ H N I + + SF+++
Sbjct: 798 MSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDL 846
Score = 56 (24.8 bits), Expect = 1.9e-12, Sum P(3) = 1.9e-12
Identities = 13/43 (30%), Positives = 25/43 (58%)
Query: 650 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L + N ++V + L+ +LT + +N I +L +H+FSN+
Sbjct: 757 LYLEGNHLTAVPK-ELSAFRQLTLIDLSNNSISMLTNHTFSNM 798
Score = 54 (24.1 bits), Expect = 3.0e-12, Sum P(3) = 3.0e-12
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
L SL+VL++ N SSV G+ L L+ L+ N +
Sbjct: 822 LRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPL 859
Score = 53 (23.7 bits), Expect = 6.9e-09, Sum P(2) = 6.9e-09
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L SL L + N+ + + +G GL L L + N+I+ L ++F ++
Sbjct: 354 LKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDL 402
Score = 51 (23.0 bits), Expect = 6.1e-12, Sum P(3) = 6.1e-12
Identities = 11/36 (30%), Positives = 23/36 (63%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 679
LSS+++LS+ N+ +++ GA L L++++ N
Sbjct: 628 LSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSN 663
Score = 48 (22.0 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 8/46 (17%), Positives = 25/46 (54%)
Query: 647 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L ++ +++N S + + + L++L +N++ + H+F+ +
Sbjct: 777 LTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNRLRCIPVHAFNGL 822
Score = 44 (20.5 bits), Expect = 3.1e-11, Sum P(3) = 3.1e-11
Identities = 14/68 (20%), Positives = 31/68 (45%)
Query: 625 INRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL 684
IN +N+ + V+ + + ++ L + NQ ++ GL L +L N I +
Sbjct: 562 INLSNNRIKEVR-EGAFDGAAGVQELMLTGNQLETMHGRMFRGLSSLKTLMLRSNLISCV 620
Query: 685 EDHSFSNV 692
+ +F+ +
Sbjct: 621 SNDTFAGL 628
Score = 43 (20.2 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 11/38 (28%), Positives = 16/38 (42%)
Query: 650 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI-DVLED 686
+ + N S+ GA KL + NQI D+ D
Sbjct: 312 IRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPD 349
>RGD|620810 [details] [associations]
symbol:Rtn4r "reticulon 4 receptor" species:10116 "Rattus
norvegicus" [GO:0004872 "receptor activity" evidence=TAS]
[GO:0005783 "endoplasmic reticulum" evidence=IEA;ISO] [GO:0005886
"plasma membrane" evidence=IEA;ISO] [GO:0007409 "axonogenesis"
evidence=IEA;ISO] [GO:0009986 "cell surface" evidence=IEA;ISO]
[GO:0031225 "anchored to membrane" evidence=IEA] [GO:0050771
"negative regulation of axonogenesis" evidence=TAS]
InterPro:IPR001611 PROSITE:PS51450 RGD:620810 GO:GO:0005783
GO:GO:0005886 GO:GO:0009986 GO:GO:0031225 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0004872 GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GO:GO:0050771 GeneTree:ENSGT00690000101803 HOGENOM:HOG000116109
HOVERGEN:HBG063707 CTD:65078 KO:K16659 OrthoDB:EOG4MGS7M
EMBL:AY028438 EMBL:AF462390 IPI:IPI00197503 RefSeq:NP_446065.1
UniGene:Rn.229952 PDB:3KJ4 PDBsum:3KJ4 ProteinModelPortal:Q99M75
SMR:Q99M75 MINT:MINT-243866 STRING:Q99M75
Ensembl:ENSRNOT00000051037 GeneID:113912 KEGG:rno:113912
InParanoid:Q99M75 EvolutionaryTrace:Q99M75 NextBio:618010
Genevestigator:Q99M75 GermOnline:ENSRNOG00000030920 Uniprot:Q99M75
Length = 473
Score = 213 (80.0 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 72/237 (30%), Positives = 103/237 (43%)
Query: 136 GAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLN 195
GA + + P P L VPT A + R+ L N++ + SF+ +L
Sbjct: 29 GACVCYNEPKVTTSCPQQGLQAVPTGIPA----SSQRIFLHGNRISYVPAASFQSCRNLT 84
Query: 196 FLDLSYNKLMTLSQDCLAPLVTLRVLRLQGN-RLTVSVVAALQGLRSVTDLDLSHNLLAG 254
L L N L + L L L L N +L V +GL + L L L
Sbjct: 85 ILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTFRGLGHLHTLHLDRCGLQ- 143
Query: 255 PLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALST 314
LGP L++L+ L + N ++ L LT L H N+I + +H+FR L +
Sbjct: 144 ELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGLHS 203
Query: 315 LSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
L L L N + V + L L TL L N L L +++ PL+SLQ LRL+DN
Sbjct: 204 LDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNLSMLPAEVLVPLRSLQYLRLNDN 260
Score = 136 (52.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 48/162 (29%), Positives = 74/162 (45%)
Query: 214 PLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIA 273
P + R+ L GNR++ A+ Q R++T L L N LAG + + L+ L+ L ++
Sbjct: 56 PASSQRIF-LHGNRISYVPAASFQSCRNLTILWLHSNALAG-IDAAAFTGLTLLEQLDLS 113
Query: 274 HN-QFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGAS 332
N Q V GL L +L + L FR L+ L +L L N + A+ +
Sbjct: 114 DNAQLRVVDPTTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQALPDNT 173
Query: 333 LAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 374
L NLT L L N + ++ + L SL L L N ++
Sbjct: 174 FRDLGNLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVA 215
Score = 122 (48.0 bits), Expect = 0.00036, P = 0.00036
Identities = 51/161 (31%), Positives = 73/161 (45%)
Query: 90 GLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALG 149
GL E++ L D V V P F LH L + L+ + G F GL++ LQ L
Sbjct: 103 GLTLLEQLDLSDNAQLRV-VDPTTFRGLGHLHTLHLDRCGLQELGPGLFRGLAA-LQYLY 160
Query: 150 LPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQ 209
L +N L +P + L NL L L N++ + +F+GL SL+ L L N + +
Sbjct: 161 LQDNNLQALPDNTFRDLG-NLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHP 219
Query: 210 DCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHN 250
L L L L N L++ L LRS+ L L+ N
Sbjct: 220 HAFRDLGRLMTLYLFANNLSMLPAEVLVPLRSLQYLRLNDN 260
Score = 109 (43.4 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 36/122 (29%), Positives = 58/122 (47%)
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 317
P+ +P SS ++ + N+ S V + LT L H N + ++ +F L+ L
Sbjct: 52 PTGIPA-SSQRIF-LHGNRISYVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQ 109
Query: 318 LDLAHN-RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISME 376
LDL+ N ++ V + L +L TL L L+ L L L +LQ L L DN++
Sbjct: 110 LDLSDNAQLRVVDPTTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQAL 169
Query: 377 PE 378
P+
Sbjct: 170 PD 171
Score = 58 (25.5 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L +L L + N+ SV A GL L L H N + + H+F ++
Sbjct: 177 LGNLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDL 225
>RGD|2336 [details] [associations]
symbol:Chad "chondroadherin" species:10116 "Rattus norvegicus"
[GO:0001502 "cartilage condensation" evidence=IEP] [GO:0005578
"proteinaceous extracellular matrix" evidence=TAS] InterPro:IPR001611
PROSITE:PS51450 RGD:2336 GO:GO:0005578 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0001502 CTD:1101
HOGENOM:HOG000013150 HOVERGEN:HBG005324 KO:K06248 OrthoDB:EOG4K9BCM
OMA:CHCHGGD EMBL:AF004953 IPI:IPI00196534 RefSeq:NP_062037.1
UniGene:Rn.9899 ProteinModelPortal:O70210 STRING:O70210
Ensembl:ENSRNOT00000004435 GeneID:29195 KEGG:rno:29195 UCSC:RGD:2336
GeneTree:ENSGT00700000104056 InParanoid:O70210 NextBio:608331
Genevestigator:O70210 GermOnline:ENSRNOG00000003304 Uniprot:O70210
Length = 358
Score = 209 (78.6 bits), Expect = 3.9e-14, P = 3.9e-14
Identities = 61/200 (30%), Positives = 98/200 (49%)
Query: 173 LDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSV 232
L LSHN + L +F L+ L +L L +NK+ L + L+PLV L +L+L N++
Sbjct: 103 LYLSHNDIRVLRAGAFDDLTELTYLYLDHNKVSELPRGLLSPLVNLFILQLNNNKIRELR 162
Query: 233 VAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLT 292
A QG + + L LS N L L P ++ + +L + NQ SS AL+ L +
Sbjct: 163 AGAFQGAKDLRWLYLSENALTS-LHPGSLDDVENLAKFHLDRNQLSSYPSAALSKLRVVE 221
Query: 293 SLSCHHNQIDVLEDHSFRALST-LSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRA 351
L HN + + D++F++ L L L + + S A+ A ++ L + L +N L
Sbjct: 222 ELKLSHNPLKSIPDNAFQSFGRYLETLWLDNTNLEKFSDAAFAGVTTLKHVHLENNRLNQ 281
Query: 352 LTQDLITPLKSLQELRLDDN 371
L P +L+ L L +N
Sbjct: 282 LPSTF--PFDNLETLTLTNN 299
Score = 168 (64.2 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 65/220 (29%), Positives = 101/220 (45%)
Query: 99 LLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVV 158
L C + V G F L L +S +++ + GAF L+ L L L +N +S +
Sbjct: 81 LQHCNIREVAA--GAFRGLKQLIYLYLSHNDIRVLRAGAFDDLTE-LTYLYLDHNKVSEL 137
Query: 159 PTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTL 218
P L+PL NL L L++N++ +L +F+G L +L LS N L +L L + L
Sbjct: 138 PRGLLSPLV-NLFILQLNNNKIRELRAGAFQGAKDLRWLYLSENALTSLHPGSLDDVENL 196
Query: 219 RVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSS-LKVLSIAHNQF 277
L N+L+ AAL LR V +L LSHN L + + L+ L + +
Sbjct: 197 AKFHLDRNQLSSYPSAALSKLRVVEELKLSHNPLKS-IPDNAFQSFGRYLETLWLDNTNL 255
Query: 278 SSVRRGALAGLDKLTSLSCHHNQIDVLED-HSFRALSTLS 316
A AG+ L + +N+++ L F L TL+
Sbjct: 256 EKFSDAAFAGVTTLKHVHLENNRLNQLPSTFPFDNLETLT 295
Score = 167 (63.8 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 58/221 (26%), Positives = 97/221 (43%)
Query: 174 DLSHNQLYKLENTSFKGLS-SLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSV 232
DL H K+ +S + L+L N L+ + + L L LQ +
Sbjct: 31 DLQHVICDKVGLQKIPKVSETTKLLNLQRNNFPVLAANSFRTVPNLVSLHLQHCNIREVA 90
Query: 233 VAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLT 292
A +GL+ + L LSHN + L L+ L L + HN+ S + RG L+ L L
Sbjct: 91 AGAFRGLKQLIYLYLSHNDIR-VLRAGAFDDLTELTYLYLDHNKVSELPRGLLSPLVNLF 149
Query: 293 SLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRAL 352
L ++N+I L +F+ L L L+ N + ++ SL + NL L N L +
Sbjct: 150 ILQLNNNKIRELRAGAFQGAKDLRWLYLSENALTSLHPGSLDDVENLAKFHLDRNQLSSY 209
Query: 353 TQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELIY 393
++ L+ ++EL+L N + P+ + F LE ++
Sbjct: 210 PSAALSKLRVVEELKLSHNPLKSIPDNAFQSFGRY-LETLW 249
Score = 157 (60.3 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 54/216 (25%), Positives = 94/216 (43%)
Query: 173 LDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSV 232
L+L N L SF+ + +L L L + + ++ L L L L N + V
Sbjct: 55 LNLQRNNFPVLAANSFRTVPNLVSLHLQHCNIREVAAGAFRGLKQLIYLYLSHNDIRVLR 114
Query: 233 VAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLT 292
A L +T L L HN ++ L + L +L +L + +N+ +R GA G L
Sbjct: 115 AGAFDDLTELTYLYLDHNKVS-ELPRGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDLR 173
Query: 293 SLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRAL 352
L N + L S + L+ L N++ + A+L+ L + L LSHN L+++
Sbjct: 174 WLYLSENALTSLHPGSLDDVENLAKFHLDRNQLSSYPSAALSKLRVVEELKLSHNPLKSI 233
Query: 353 TQDLITPL-KSLQELRLDDNDISMEPECIYVGFNTM 387
+ + L+ L LD+ ++ + + G T+
Sbjct: 234 PDNAFQSFGRYLETLWLDNTNLEKFSDAAFAGVTTL 269
>UNIPROTKB|P02750 [details] [associations]
symbol:LRG1 "Leucine-rich alpha-2-glycoprotein"
species:9606 "Homo sapiens" [GO:0050873 "brown fat cell
differentiation" evidence=IEA] [GO:0016020 "membrane" evidence=NAS]
[GO:0005576 "extracellular region" evidence=NAS] [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0005615 "extracellular space" evidence=IDA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005615
GO:GO:0016020 EMBL:AF403428 EMBL:BC034389 EMBL:BC070198
IPI:IPI00022417 PIR:A03211 RefSeq:NP_443204.1 UniGene:Hs.655559
ProteinModelPortal:P02750 SMR:P02750 STRING:P02750
PhosphoSite:P02750 DMDM:23503037 DOSAC-COBS-2DPAGE:P02750
SWISS-2DPAGE:P02750 PaxDb:P02750 PeptideAtlas:P02750 PRIDE:P02750
DNASU:116844 Ensembl:ENST00000306390 GeneID:116844 KEGG:hsa:116844
UCSC:uc002mau.3 CTD:116844 GeneCards:GC19M004538 HGNC:HGNC:29480
HPA:HPA001888 HPA:HPA001889 MIM:611289 neXtProt:NX_P02750
PharmGKB:PA134919634 eggNOG:COG4886 HOGENOM:HOG000234378
HOVERGEN:HBG000045 InParanoid:P02750 OMA:RCAGPEA OrthoDB:EOG4TMR2P
PhylomeDB:P02750 GenomeRNAi:116844 NextBio:80020
ArrayExpress:P02750 Bgee:P02750 CleanEx:HS_LRG1
Genevestigator:P02750 GermOnline:ENSG00000171236 GO:GO:0050873
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
Uniprot:P02750
Length = 347
Score = 208 (78.3 bits), Expect = 4.4e-14, P = 4.4e-14
Identities = 73/198 (36%), Positives = 93/198 (46%)
Query: 68 LPHTLRCTANK-SDLYAISESLRGLEPD-----ERVSLLDCTLSNVTVLP-GKFLEGVTL 120
LP L A+K +L+ S L L P+ ++ +LD T + +T LP G F TL
Sbjct: 83 LPANLLQGASKLQELHLSSNGLESLSPEFLRPVPQLRVLDLTRNALTGLPPGLFQASATL 142
Query: 121 HGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQL 180
LV+ +L+ + GL + L L L N L +P LA L LDL NQL
Sbjct: 143 DTLVLKENQLEVLEVSWLHGLKA-LGHLDLSGNRLRKLPPGLLANFTL-LRTLDLGENQL 200
Query: 181 YKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLR 240
L +G L L L NKL L +D L P LR L L GN+L A QGLR
Sbjct: 201 ETLPPDLLRGPLQLERLHLEGNKLQVLGKDLLLPQPDLRYLFLNGNKLARVAAGAFQGLR 260
Query: 241 SVTDLDLSHNLLAG-PLG 257
+ LDLS+N LA P G
Sbjct: 261 QLDMLDLSNNSLASVPEG 278
Score = 189 (71.6 bits), Expect = 6.7e-12, P = 6.7e-12
Identities = 69/224 (30%), Positives = 101/224 (45%)
Query: 155 LSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAP 214
L+ +P + L A L L LS N L L + + L LDL+ N L L
Sbjct: 80 LTHLPANLLQG-ASKLQELHLSSNGLESLSPEFLRPVPQLRVLDLTRNALTGLPPGLFQA 138
Query: 215 LVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAH 274
TL L L+ N+L V V+ L GL+++ LDLS N L L P + + L+ L +
Sbjct: 139 SATLDTLVLKENQLEVLEVSWLHGLKALGHLDLSGNRLR-KLPPGLLANFTLLRTLDLGE 197
Query: 275 NQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLA 334
NQ ++ L G +L L N++ VL L +L L N++ V+ +
Sbjct: 198 NQLETLPPDLLRGPLQLERLHLEGNKLQVLGKDLLLPQPDLRYLFLNGNKLARVAAGAFQ 257
Query: 335 HLSNLTTLDLSHNFLRALTQDLITPLKSLQ-ELRLDDNDISMEP 377
L L LDLS+N L ++ + L L ++R D DIS P
Sbjct: 258 GLRQLDMLDLSNNSLASVPEGLWASLGQPNWDMR-DGFDISGNP 300
Score = 171 (65.3 bits), Expect = 7.4e-10, P = 7.4e-10
Identities = 53/172 (30%), Positives = 82/172 (47%)
Query: 236 LQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLS 295
LQG + +L LS N L L P + + L+VL + N + + G L +L
Sbjct: 88 LQGASKLQELHLSSNGLES-LSPEFLRPVPQLRVLDLTRNALTGLPPGLFQASATLDTLV 146
Query: 296 CHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQD 355
NQ++VLE L L HLDL+ NR+ + LA+ + L TLDL N L L D
Sbjct: 147 LKENQLEVLEVSWLHGLKALGHLDLSGNRLRKLPPGLLANFTLLRTLDLGENQLETLPPD 206
Query: 356 LIT-PLKSLQELRLDDNDISM--------EPECIYVGFNTMDLELIYSGVWR 398
L+ PL+ L+ L L+ N + + +P+ Y+ N L + +G ++
Sbjct: 207 LLRGPLQ-LERLHLEGNKLQVLGKDLLLPQPDLRYLFLNGNKLARVAAGAFQ 257
Score = 153 (58.9 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 57/193 (29%), Positives = 84/193 (43%)
Query: 189 KGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLS 248
+G S L L LS N L +LS + L P+ LRVL L N LT Q ++ L L
Sbjct: 89 QGASKLQELHLSSNGLESLSPEFLRPVPQLRVLDLTRNALTGLPPGLFQASATLDTLVLK 148
Query: 249 HNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHS 308
N L L S + L +L L ++ N+ + G LA L +L NQ++ L
Sbjct: 149 ENQLE-VLEVSWLHGLKALGHLDLSGNRLRKLPPGLLANFTLLRTLDLGENQLETLPPDL 207
Query: 309 FRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRL 368
R L L L N++ + L +L L L+ N L + L+ L L L
Sbjct: 208 LRGPLQLERLHLEGNKLQVLGKDLLLPQPDLRYLFLNGNKLARVAAGAFQGLRQLDMLDL 267
Query: 369 DDNDISMEPECIY 381
+N ++ PE ++
Sbjct: 268 SNNSLASVPEGLW 280
Score = 124 (48.7 bits), Expect = 0.00013, P = 0.00013
Identities = 50/193 (25%), Positives = 78/193 (40%)
Query: 197 LDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPL 256
L + + L L + L L+ L L N L L+ + + LDL+ N L G L
Sbjct: 73 LAVEFFNLTHLPANLLQGASKLQELHLSSNGLESLSPEFLRPVPQLRVLDLTRNALTG-L 131
Query: 257 GPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLS 316
P ++L L + NQ + L GL L L N++ L + L
Sbjct: 132 PPGLFQASATLDTLVLKENQLEVLEVSWLHGLKALGHLDLSGNRLRKLPPGLLANFTLLR 191
Query: 317 HLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISME 376
LDL N++ + L L L L N L+ L +DL+ P L+ L L+ N ++
Sbjct: 192 TLDLGENQLETLPPDLLRGPLQLERLHLEGNKLQVLGKDLLLPQPDLRYLFLNGNKLARV 251
Query: 377 PECIYVGFNTMDL 389
+ G +D+
Sbjct: 252 AAGAFQGLRQLDM 264
>TAIR|locus:2009288 [details] [associations]
symbol:AT1G34420 species:3702 "Arabidopsis thaliana"
[GO:0004672 "protein kinase activity" evidence=IEA;ISS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0006468 "protein phosphorylation" evidence=IEA]
[GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0006499 "N-terminal
protein myristoylation" evidence=RCA] [GO:0009627 "systemic
acquired resistance" evidence=RCA] [GO:0009697 "salicylic acid
biosynthetic process" evidence=RCA] [GO:0009863 "salicylic acid
mediated signaling pathway" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0045087 "innate
immune response" evidence=RCA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000719 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS50011
PROSITE:PS51450 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 SUPFAM:SSF56112
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0004672
InterPro:IPR025875 Pfam:PF12799 EMBL:AC023279 EMBL:AC023913
HOGENOM:HOG000116551 EMBL:FJ708646 IPI:IPI00522960
RefSeq:NP_174702.1 UniGene:At.51931 ProteinModelPortal:Q9LNK3
SMR:Q9LNK3 STRING:Q9LNK3 PRIDE:Q9LNK3 EnsemblPlants:AT1G34420.1
GeneID:840345 KEGG:ath:AT1G34420 TAIR:At1g34420 InParanoid:Q9LNK3
OMA:VMVPLAY ProtClustDB:CLSN2720516 Genevestigator:Q9LNK3
Uniprot:Q9LNK3
Length = 966
Score = 202 (76.2 bits), Expect = 4.5e-14, Sum P(2) = 4.5e-14
Identities = 83/258 (32%), Positives = 120/258 (46%)
Query: 123 LVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRL-DLSH-NQL 180
L +S+ +L N S + L++L + NN LS +P + N +RL L H N
Sbjct: 87 LSLSNFDLSNSSFLPLVCNLQTLESLDVSNNRLSSIPEGFVT----NCERLIALKHLNFS 142
Query: 181 YKLENTS--FKGLSSLNFLDLSYNKLMTLSQDC-LAPLVTLRVLRLQGNRLTVSVVAALQ 237
+TS F+G S L LD S+N L D LV LR L L NRLT SV L
Sbjct: 143 TNKFSTSPGFRGFSKLAVLDFSHNVLSGNVGDYGFDGLVQLRSLNLSFNRLTGSVPVHLT 202
Query: 238 GLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCH 297
+S+ L++S N L+G + P + L ++ ++ NQ + +L L KL SL
Sbjct: 203 --KSLEKLEVSDNSLSGTI-PEGIKDYQELTLIDLSDNQLNGSIPSSLGNLSKLESLLLS 259
Query: 298 HNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLA-HLSNLTTLDLSHNFLR-ALTQD 355
+N + L S ++ TL NR + L HL NL DLS N L ++ D
Sbjct: 260 NNYLSGLIPESLSSIQTLRRFAANRNRFTGEIPSGLTKHLENL---DLSFNSLAGSIPGD 316
Query: 356 LITPLKSLQELRLDDNDI 373
L++ LK L + L N +
Sbjct: 317 LLSQLK-LVSVDLSSNQL 333
Score = 199 (75.1 bits), Expect = 4.4e-12, P = 4.4e-12
Identities = 77/277 (27%), Positives = 133/277 (48%)
Query: 100 LDCTLSNVT-VLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLS-V 157
LD + +++ +PG L + L + +SS +L + +SS L L L +N L+
Sbjct: 302 LDLSFNSLAGSIPGDLLSQLKLVSVDLSSNQLVGWIPQS---ISSSLVRLRLGSNKLTGS 358
Query: 158 VPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVT 217
VP+ A L L L++ +N L SF L SLN L+L+ N+ + L
Sbjct: 359 VPSVAFESLQL-LTYLEMDNNSLTGFIPPSFGNLVSLNLLNLAMNEFTGILPPAFGNLSR 417
Query: 218 LRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQF 277
L+V++LQ N+LT + + L ++ L++S N L+G + PS + +L L +++ N
Sbjct: 418 LQVIKLQQNKLTGEIPDTIAFLSNLLILNISCNSLSGSIPPS-LSQLKRLSNMNLQGNNL 476
Query: 278 SSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLS 337
+ + L+ L L NQ+ R L +S L+L++N +L+ L
Sbjct: 477 NGTIPDNIQNLEDLIELQLGQNQLRGRIPVMPRKLQ-IS-LNLSYNLFEGSIPTTLSELD 534
Query: 338 NLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 374
L LDLS+N + ++ L SL +L L +N ++
Sbjct: 535 RLEVLDLSNNNFSGEIPNFLSRLMSLTQLILSNNQLT 571
Score = 185 (70.2 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 79/315 (25%), Positives = 138/315 (43%)
Query: 68 LPHTLRCTANKSDLYAISESLRGLEPDERVSL--LDCTLSNVTVLPGKFLEGVTLH--GL 123
+P +L + L + L GL P+ S+ L +N G+ G+T H L
Sbjct: 243 IPSSLGNLSKLESLLLSNNYLSGLIPESLSSIQTLRRFAANRNRFTGEIPSGLTKHLENL 302
Query: 124 VISSGELKNISDGAFIGLSSPLQALGLPNN-LLSVVPTSALAPLAPNLDRLDLSHNQLY- 181
+S L G + L ++ L +N L+ +P S ++ +L RL L N+L
Sbjct: 303 DLSFNSLAGSIPGDLLS-QLKLVSVDLSSNQLVGWIPQS----ISSSLVRLRLGSNKLTG 357
Query: 182 KLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRS 241
+ + +F+ L L +L++ N L LV+L +L L N T + A L
Sbjct: 358 SVPSVAFESLQLLTYLEMDNNSLTGFIPPSFGNLVSLNLLNLAMNEFTGILPPAFGNLSR 417
Query: 242 VTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 301
+ + L N L G + P T+ LS+L +L+I+ N S +L+ L +L++++ N +
Sbjct: 418 LQVIKLQQNKLTGEI-PDTIAFLSNLLILNISCNSLSGSIPPSLSQLKRLSNMNLQGNNL 476
Query: 302 DVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLK 361
+ + + L L L L N++ L +L+LS+N ++ L
Sbjct: 477 NGTIPDNIQNLEDLIELQLGQNQLRGRIPVMPRKLQ--ISLNLSYNLFEGSIPTTLSELD 534
Query: 362 SLQELRLDDNDISME 376
L+ L L +N+ S E
Sbjct: 535 RLEVLDLSNNNFSGE 549
Score = 166 (63.5 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 61/236 (25%), Positives = 111/236 (47%)
Query: 163 LAPLAPNLDRLDLSHNQLYKLENTSFK----GLSSLNFLDLSYNKLMTLSQDCLAP---L 215
L L N + LS + + L N+SF L +L LD+S N+L ++ + + L
Sbjct: 75 LCSLPDNSSVISLSLSN-FDLSNSSFLPLVCNLQTLESLDVSNNRLSSIPEGFVTNCERL 133
Query: 216 VTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHN 275
+ L+ L N+ + S +G + LD SHN+L+G +G L L+ L+++ N
Sbjct: 134 IALKHLNFSTNKFSTS--PGFRGFSKLAVLDFSHNVLSGNVGDYGFDGLVQLRSLNLSFN 191
Query: 276 QFS-SVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLA 334
+ + SV L+KL N + + L+ +DL+ N++ +SL
Sbjct: 192 RLTGSVPVHLTKSLEKL---EVSDNSLSGTIPEGIKDYQELTLIDLSDNQLNGSIPSSLG 248
Query: 335 HLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISME-PECIYVGFNTMDL 389
+LS L +L LS+N+L L + ++ +++L+ + N + E P + +DL
Sbjct: 249 NLSKLESLLLSNNYLSGLIPESLSSIQTLRRFAANRNRFTGEIPSGLTKHLENLDL 304
Score = 146 (56.5 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 66/245 (26%), Positives = 103/245 (42%)
Query: 132 NISDGAFIGLSSPLQALGLP-NNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKG 190
N+ D F GL L++L L N L VP L +L++L++S N L K
Sbjct: 171 NVGDYGFDGLVQ-LRSLNLSFNRLTGSVPVH----LTKSLEKLEVSDNSLSGTIPEGIKD 225
Query: 191 LSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHN 250
L +DLS N+L L L L L L N L+ + +L ++++ + N
Sbjct: 226 YQELTLIDLSDNQLNGSIPSSLGNLSKLESLLLSNNYLSGLIPESLSSIQTLRRFAANRN 285
Query: 251 LLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFR 310
G + PS + + L+ L ++ N + G L KL S+ NQ+ S
Sbjct: 286 RFTGEI-PSGLTK--HLENLDLSFNSLAGSIPGDLLSQLKLVSVDLSSNQLVGWIPQSIS 342
Query: 311 ALSTLSHLDLAHNRIV-AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLD 369
S+L L L N++ +V + L LT L++ +N L L SL L L
Sbjct: 343 --SSLVRLRLGSNKLTGSVPSVAFESLQLLTYLEMDNNSLTGFIPPSFGNLVSLNLLNLA 400
Query: 370 DNDIS 374
N+ +
Sbjct: 401 MNEFT 405
Score = 128 (50.1 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 62/213 (29%), Positives = 97/213 (45%)
Query: 187 SFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGN-RLTVS---VVAALQGLRSV 242
SF + F +LS N+ T+ + L+ + + L G+ R S V+ +L SV
Sbjct: 27 SFLSCCHVCFSELSLNQTNTMIE--LSSFLNISDWNLPGSERNPCSWNGVLCSLPDNSSV 84
Query: 243 TDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN--Q 300
L LS+ L+ V L +L+ L +++N+ SS+ G + ++L +L H N
Sbjct: 85 ISLSLSNFDLSNSSFLPLVCNLQTLESLDVSNNRLSSIPEGFVTNCERLIALK-HLNFST 143
Query: 301 IDVLEDHSFRALSTLSHLDLAHNRIVA-VSGASLAHLSNLTTLDLSHNFLRALTQDLITP 359
FR S L+ LD +HN + V L L +L+LS N L +T
Sbjct: 144 NKFSTSPGFRGFSKLAVLDFSHNVLSGNVGDYGFDGLVQLRSLNLSFNRLTGSVPVHLT- 202
Query: 360 LKSLQELRLDDNDISME-PECI--YVGFNTMDL 389
KSL++L + DN +S PE I Y +DL
Sbjct: 203 -KSLEKLEVSDNSLSGTIPEGIKDYQELTLIDL 234
Score = 124 (48.7 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 67/241 (27%), Positives = 106/241 (43%)
Query: 142 SSPLQALGLPNNLLSVVPTSALAPLAPNL---DRLDLSHNQLYKLEN---TSFKGLSSLN 195
+S + +L L N LS S+ PL NL + LD+S+N+L + T+ + L +L
Sbjct: 81 NSSVISLSLSNFDLS---NSSFLPLVCNLQTLESLDVSNNRLSSIPEGFVTNCERLIALK 137
Query: 196 FLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVA-ALQGLRSVTDLDLSHNLLAG 254
L+ S NK T L VL N L+ +V GL + L+LS N L G
Sbjct: 138 HLNFSTNKFST--SPGFRGFSKLAVLDFSHNVLSGNVGDYGFDGLVQLRSLNLSFNRLTG 195
Query: 255 PLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALST 314
+ P V SL+ L ++ N S + +LT + NQ++ S LS
Sbjct: 196 SV-P--VHLTKSLEKLEVSDNSLSGTIPEGIKDYQELTLIDLSDNQLNGSIPSSLGNLSK 252
Query: 315 LSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPL-KSLQELRLDDNDI 373
L L L++N + + SL+ + L + N T ++ + L K L+ L L N +
Sbjct: 253 LESLLLSNNYLSGLIPESLSSIQTLRRFAANRN---RFTGEIPSGLTKHLENLDLSFNSL 309
Query: 374 S 374
+
Sbjct: 310 A 310
Score = 65 (27.9 bits), Expect = 4.5e-14, Sum P(2) = 4.5e-14
Identities = 22/67 (32%), Positives = 35/67 (52%)
Query: 616 IPVAQQEDDINRNNSDSRYVKLQATTIL-LSSLKVLSIAHNQFSSVRRGALAGLDKLTSL 674
IPV ++ I+ N S + + TT+ L L+VL +++N FS L+ L LT L
Sbjct: 504 IPVMPRKLQISLNLSYNLFEGSIPTTLSELDRLEVLDLSNNNFSGEIPNFLSRLMSLTQL 563
Query: 675 SCHHNQI 681
+NQ+
Sbjct: 564 ILSNNQL 570
Score = 53 (23.7 bits), Expect = 8.0e-13, Sum P(2) = 8.0e-13
Identities = 11/38 (28%), Positives = 21/38 (55%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
L SL +L++A N+F+ + A L +L + N++
Sbjct: 391 LVSLNLLNLAMNEFTGILPPAFGNLSRLQVIKLQQNKL 428
Score = 51 (23.0 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 647 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L ++ ++ NQ + +L L KL SL +N + L S S++
Sbjct: 229 LTLIDLSDNQLNGSIPSSLGNLSKLESLLLSNNYLSGLIPESLSSI 274
Score = 45 (20.9 bits), Expect = 5.4e-12, Sum P(2) = 5.4e-12
Identities = 16/50 (32%), Positives = 23/50 (46%)
Query: 645 SSLKVLSIAHNQFS-SVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNVI 693
SSL L + N+ + SV A L LT L +N + SF N++
Sbjct: 343 SSLVRLRLGSNKLTGSVPSVAFESLQLLTYLEMDNNSLTGFIPPSFGNLV 392
>UNIPROTKB|G5E9B3 [details] [associations]
symbol:LGR4 "Leucine-rich repeat-containing G
protein-coupled receptor 4, isoform CRA_a" species:9606 "Homo
sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 EMBL:CH471064
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 EMBL:AC090597 UniGene:Hs.502176
HGNC:HGNC:13299 ChiTaRS:LGR4 EMBL:AC100771
ProteinModelPortal:G5E9B3 SMR:G5E9B3 Ensembl:ENST00000389858
ArrayExpress:G5E9B3 Bgee:G5E9B3 Uniprot:G5E9B3
Length = 927
Score = 210 (79.0 bits), Expect = 4.7e-14, Sum P(2) = 4.7e-14
Identities = 83/311 (26%), Positives = 137/311 (44%)
Query: 64 CACDLPHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVT-LHG 122
C+CD + C+ L A+ E L L ++++ + K L G+ L
Sbjct: 33 CSCDGDRRVDCSGK--GLTAVPEGLSAF-----TQALQLAGNDLSFIHPKALSGLKELKV 85
Query: 123 LVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYK 182
L + + +LK + A GLS+ LQ+L L N ++ VP + L L L L N L +
Sbjct: 86 LTLQNNQLKTVPSEAIRGLSA-LQSLRLDANHITSVPEDSFEGLV-QLRHLWLDDNSLTE 143
Query: 183 LENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSV 242
+ L +L L L+ NK+ ++ L +L VL L N++ GL ++
Sbjct: 144 VPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIRSLSQHCFDGLDNL 203
Query: 243 TDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID 302
LDL++N L G P + L SLK L N S + GA G L ++ + N +
Sbjct: 204 ETLDLNYNNL-GEF-PQAIKALPSLKELGFHSNSISVIPDGAFDGNPLLRTIHLYDNPLS 261
Query: 303 VLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKS 362
+ + +F LS L L + +V +L +L +L L+ + ++ +L K
Sbjct: 262 FVGNSAFHNLSDLHSLVIRGASMVQ-QFPNLTGTVHLESLTLTGTKISSIPNNLCQEQKM 320
Query: 363 LQELRLDDNDI 373
L+ L L N+I
Sbjct: 321 LRTLDLSYNNI 331
Score = 182 (69.1 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 87/324 (26%), Positives = 135/324 (41%)
Query: 71 TLRCTANKSDLYAISE-SLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGE 129
+LR AN + ++ E S GL + L D +L+ V V P L TL L ++ +
Sbjct: 109 SLRLDANH--ITSVPEDSFEGLVQLRHLWLDDNSLTEVPVHPLSNLP--TLQALTLALNK 164
Query: 130 LKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFK 189
+ +I D AF LSS L L L NN + + L NL+ LDL++N L + + K
Sbjct: 165 ISSIPDFAFTNLSS-LVVLHLHNNKIRSLSQHCFDGL-DNLETLDLNYNNLGEFPQ-AIK 221
Query: 190 GLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSH 249
L SL L N + + LR + L N L+ +A L +DL H
Sbjct: 222 ALPSLKELGFHSNSISVIPDGAFDGNPLLRTIHLYDNPLSFVGNSAFHNL---SDL---H 275
Query: 250 NL-LAGPLGPSTVPRLSS---LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLE 305
+L + G P L+ L+ L++ + SS+ L +L +N I L
Sbjct: 276 SLVIRGASMVQQFPNLTGTVHLESLTLTGTKISSIPNNLCQEQKMLRTLDLSYNNIRDLP 335
Query: 306 DHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQE 365
SF L + L N+I + + L +L LDLS N + + L +
Sbjct: 336 --SFNGCHALEEISLQRNQIYQIKEGTFQGLISLRILDLSRNLIHEIHSRAFATLGPITN 393
Query: 366 LRLDDNDISMEPECIYVGFNTMDL 389
L + N+++ P G N + L
Sbjct: 394 LDVSFNELTSFPTEGLNGLNQLKL 417
Score = 167 (63.8 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 58/192 (30%), Positives = 94/192 (48%)
Query: 232 VVAALQGLRSVTD-LDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDK 290
+ A +GL + T L L+ N L+ + P + L LKVL++ +NQ +V A+ GL
Sbjct: 48 LTAVPEGLSAFTQALQLAGNDLSF-IHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSA 106
Query: 291 LTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLR 350
L SL N I + + SF L L HL L N + V L++L L L L+ N +
Sbjct: 107 LQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPVHPLSNLPTLQALTLALNKIS 166
Query: 351 ALTQDLITPLKSLQELRLDDNDI-SMEPECIYVGFNTMD-LELIYS--GVWRHSTLLIPV 406
++ T L SL L L +N I S+ C + G + ++ L+L Y+ G + + +P
Sbjct: 167 SIPDFAFTNLSSLVVLHLHNNKIRSLSQHC-FDGLDNLETLDLNYNNLGEFPQAIKALPS 225
Query: 407 MLSLCTRSSVVT 418
+ L S+ ++
Sbjct: 226 LKELGFHSNSIS 237
Score = 158 (60.7 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 67/273 (24%), Positives = 120/273 (43%)
Query: 100 LDCTLSNVTVLPG-KFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVV 158
L L+ ++ +P F +L L + + +++++S F GL + L+ L L N L
Sbjct: 158 LTLALNKISSIPDFAFTNLSSLVVLHLHNNKIRSLSQHCFDGLDN-LETLDLNYNNLGEF 216
Query: 159 PTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTL 218
P A+ L P+L L N + + + +F G L + L N L + L L
Sbjct: 217 P-QAIKAL-PSLKELGFHSNSISVIPDGAFDGNPLLRTIHLYDNPLSFVGNSAFHNLSDL 274
Query: 219 RVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFS 278
L ++G + V L G + L L+ ++ + + L+ L +++N
Sbjct: 275 HSLVIRGASM-VQQFPNLTGTVHLESLTLTGTKISS-IPNNLCQEQKMLRTLDLSYNNIR 332
Query: 279 SVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSN 338
+ + G L +S NQI +++ +F+ L +L LDL+ N I + + A L
Sbjct: 333 DLP--SFNGCHALEEISLQRNQIYQIKEGTFQGLISLRILDLSRNLIHEIHSRAFATLGP 390
Query: 339 LTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
+T LD+S N L + + L L +L+L N
Sbjct: 391 ITNLDVSFNELTSFPTE---GLNGLNQLKLVGN 420
Score = 56 (24.8 bits), Expect = 4.7e-14, Sum P(2) = 4.7e-14
Identities = 12/47 (25%), Positives = 22/47 (46%)
Query: 646 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
+L+ +S+ NQ ++ G GL L L N I + +F+ +
Sbjct: 342 ALEEISLQRNQIYQIKEGTFQGLISLRILDLSRNLIHEIHSRAFATL 388
Score = 43 (20.2 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 11/47 (23%), Positives = 23/47 (48%)
Query: 647 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNVI 693
L+ L +++N + + G L +S NQI +++ +F +I
Sbjct: 321 LRTLDLSYNNIRDLP--SFNGCHALEEISLQRNQIYQIKEGTFQGLI 365
Score = 37 (18.1 bits), Expect = 4.4e-12, Sum P(2) = 4.4e-12
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 503 KNTNCSRPWVSLKQLPWSPKYQVCATLG 530
K ++ +V+L+ L YQ CA G
Sbjct: 424 KEALAAKDFVNLRSLSVPYAYQCCAFWG 451
>UNIPROTKB|F1NR92 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 Pfam:PF00054 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 InterPro:IPR006207
PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041 Pfam:PF01463
GeneTree:ENSGT00700000104083 EMBL:AADN02015249 EMBL:AADN02015250
EMBL:AADN02015251 EMBL:AADN02015252 EMBL:AADN02015253
EMBL:AADN02015254 EMBL:AADN02015255 EMBL:AADN02015256
EMBL:AADN02015257 EMBL:AADN02015258 EMBL:AADN02015259
EMBL:AADN02015260 EMBL:AADN02015261 EMBL:AADN02015262
EMBL:AADN02015263 EMBL:AADN02015264 EMBL:AADN02015265
EMBL:AADN02015266 EMBL:AADN02015267 EMBL:AADN02015268
EMBL:AADN02015269 EMBL:AADN02015270 EMBL:AADN02015271
IPI:IPI00813921 ProteinModelPortal:F1NR92
Ensembl:ENSGALT00000037317 ArrayExpress:F1NR92 Uniprot:F1NR92
Length = 1425
Score = 149 (57.5 bits), Expect = 4.8e-14, Sum P(2) = 4.8e-14
Identities = 41/131 (31%), Positives = 68/131 (51%)
Query: 148 LGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTL 207
L L NN SV+ + + P L +++LS+N++ +E +F G S +N L L+ N+L T+
Sbjct: 434 LRLNNNEFSVLEATGIFKKLPQLRKINLSNNKITDIEEGAFDGASGVNELLLTSNRLETV 493
Query: 208 SQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSL 267
L +L+ L L+ NR++ + GL SV L L N + + P + L SL
Sbjct: 494 RDKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRLLSLYDNQIT-TVAPGSFDTLHSL 552
Query: 268 KVLSIAHNQFS 278
L++ N F+
Sbjct: 553 STLNLLANPFN 563
Score = 146 (56.5 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 63/252 (25%), Positives = 106/252 (42%)
Query: 150 LPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQ 209
L N + +P A A ++ L L +NQ+ +E+ +F+ L L L L+ N + LS
Sbjct: 26 LSENQIQAIPRKAFRG-AVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSV 84
Query: 210 DCLAPLVTLRVLRLQGNRLTVSV-VAALQG-LRSVTDLDLSHNLLAGP--LGPSTVPRLS 265
+ LR RL N L +A L LR + L + GP L V +
Sbjct: 85 ASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGL-YTQCMGPAHLRGHNVAEVQ 143
Query: 266 SLK-VLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDV----LEDHSFRALSTLSHLDL 320
+ V S H F + + + L + +C +N +D L + T++ + L
Sbjct: 144 KREFVCSAGHQSFMAP---SCSVLHCPAACTCSNNIVDCRGKGLTEIPTNLPETITEIRL 200
Query: 321 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECI 380
N I + + + L +DLS+N + D L+SL L L N I+ P+ +
Sbjct: 201 EQNSIKVIPPGAFSPYKKLRRIDLSNNQISEAAPDAFQGLRSLNSLVLYGNKITELPKGL 260
Query: 381 YVGFNTMDLELI 392
+ G ++ L L+
Sbjct: 261 FEGLFSLQLLLL 272
Score = 145 (56.1 bits), Expect = 2.1e-11, Sum P(3) = 2.1e-11
Identities = 44/140 (31%), Positives = 69/140 (49%)
Query: 141 LSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLS 200
L + + L N + V+P A +P L R+DLS+NQ+ + +F+GL SLN L L
Sbjct: 191 LPETITEIRLEQNSIKVIPPGAFSPYK-KLRRIDLSNNQISEAAPDAFQGLRSLNSLVLY 249
Query: 201 YNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPST 260
NK+ L + L +L++L L N++ V A Q L ++ L L N L + T
Sbjct: 250 GNKITELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQ-TIAKGT 308
Query: 261 VPRLSSLKVL---SIAHNQF 277
L +++ L +A N F
Sbjct: 309 FSPLRAIQTLYERHLAQNPF 328
Score = 130 (50.8 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 46/214 (21%), Positives = 91/214 (42%)
Query: 175 LSHNQLYKLENTSFK-GLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVS-- 231
L++ ++ ++++ F+ F+ + + LS DC A L R +G + S
Sbjct: 359 LANKRIGQIKSKKFRCSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQ 418
Query: 232 -VVAALQGLRSVT-DLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLD 289
+ + T +L L++N + +L L+ +++++N+ + + GA G
Sbjct: 419 KLNKIPDHIPQYTAELRLNNNEFSVLEATGIFKKLPQLRKINLSNNKITDIEEGAFDGAS 478
Query: 290 KLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFL 349
+ L N+++ + D F+ L +L L L NR+ V S LS++ L L N +
Sbjct: 479 GVNELLLTSNRLETVRDKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRLLSLYDNQI 538
Query: 350 RALTQDLITPLKSLQELRLDDNDISMEPECIYVG 383
+ L SL L L N + ++G
Sbjct: 539 TTVAPGSFDTLHSLSTLNLLANPFNCNCHLAWLG 572
Score = 128 (50.1 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 30/83 (36%), Positives = 44/83 (53%)
Query: 267 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 326
+K+ ++ NQ ++ R A G + +L +NQI +ED +FRAL L L L +N I
Sbjct: 21 IKISDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNIT 80
Query: 327 AVSGASLAHLSNLTTLDLSHNFL 349
+S AS H+ L T L N L
Sbjct: 81 RLSVASFNHMPKLRTFRLHSNNL 103
Score = 124 (48.7 bits), Expect = 4.8e-14, Sum P(2) = 4.8e-14
Identities = 37/96 (38%), Positives = 53/96 (55%)
Query: 287 GLDK-LTSLSCHHNQIDVLEDHSFRALSTLSHL---DLAHNRIVAVSGASLAHLSNLTTL 342
G+ K +T L NQ ++ + LS HL DL++NRI +S S ++++ L TL
Sbjct: 647 GIPKDVTELYLDGNQFTLVP----KELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTL 702
Query: 343 DLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPE 378
LS+N LR + LKSL+ L L NDIS+ PE
Sbjct: 703 ILSYNRLRCIPARTFDGLKSLRLLSLHGNDISVVPE 738
Score = 124 (48.7 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 33/103 (32%), Positives = 53/103 (51%)
Query: 221 LRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSV 280
L L GN+ T+ V L + +T +DLS+N ++ L + ++ L L +++N+ +
Sbjct: 655 LYLDGNQFTL-VPKELSNYKHLTLIDLSNNRIS-TLSNQSFSNMTQLLTLILSYNRLRCI 712
Query: 281 RRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 323
GL L LS H N I V+ + +F LS LSHL + N
Sbjct: 713 PARTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGAN 755
Score = 121 (47.7 bits), Expect = 2.3e-10, Sum P(3) = 2.3e-10
Identities = 35/126 (27%), Positives = 59/126 (46%)
Query: 241 SVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQ 300
++T++ L N + + P L+ + +++NQ S A GL L SL + N+
Sbjct: 194 TITEIRLEQNSIK-VIPPGAFSPYKKLRRIDLSNNQISEAAPDAFQGLRSLNSLVLYGNK 252
Query: 301 IDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPL 360
I L F L +L L L N+I + + L NL L L N L+ + + +PL
Sbjct: 253 ITELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPL 312
Query: 361 KSLQEL 366
+++Q L
Sbjct: 313 RAIQTL 318
Score = 116 (45.9 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 41/161 (25%), Positives = 79/161 (49%)
Query: 65 ACDLPHT-LRCTANKSDLYAISESLRGLEPD--ERVSLLDCTLSNVTVLP-GKFLEGVTL 120
+C + H CT + + + + L + + E ++ + +++ V+P G F L
Sbjct: 160 SCSVLHCPAACTCSNNIVDCRGKGLTEIPTNLPETITEIRLEQNSIKVIPPGAFSPYKKL 219
Query: 121 HGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQL 180
+ +S+ ++ + AF GL S L +L L N ++ +P L +L L L+ N++
Sbjct: 220 RRIDLSNNQISEAAPDAFQGLRS-LNSLVLYGNKITELPKGLFEGLF-SLQLLLLNANKI 277
Query: 181 YKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVL 221
L +F+ L +LN L L NKL T+++ +PL ++ L
Sbjct: 278 NCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTL 318
Score = 115 (45.5 bits), Expect = 4.0e-07, Sum P(3) = 4.0e-07
Identities = 34/130 (26%), Positives = 62/130 (47%)
Query: 217 TLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQ 276
T+ +RL+ N + V A + + +DLS+N ++ P L SL L + N+
Sbjct: 194 TITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQIS-EAAPDAFQGLRSLNSLVLYGNK 252
Query: 277 FSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHL 336
+ + +G GL L L + N+I+ L +F+ L L+ L L N++ ++ + + L
Sbjct: 253 ITELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPL 312
Query: 337 SNLTTLDLSH 346
+ TL H
Sbjct: 313 RAIQTLYERH 322
Score = 109 (43.4 bits), Expect = 8.1e-10, Sum P(2) = 8.1e-10
Identities = 50/170 (29%), Positives = 76/170 (44%)
Query: 64 CACDL--PHTLRCTANKSDLYAISESLRGLEPDERVSLL-DCTLSN--VTVLP--GKFLE 116
C DL P RC D ++ L + PD + L+N +VL G F +
Sbjct: 396 CFADLACPEKCRCEGTTVD--CSNQKLNKI-PDHIPQYTAELRLNNNEFSVLEATGIFKK 452
Query: 117 GVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLS 176
L + +S+ ++ +I +GAF G S + L L +N L V L +L L L
Sbjct: 453 LPQLRKINLSNNKITDIEEGAFDGASGVNELL-LTSNRLETVRDKMFKGLE-SLKTLMLR 510
Query: 177 HNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGN 226
N++ + N SF GLSS+ L L N++ T++ L +L L L N
Sbjct: 511 SNRVSCVGNDSFTGLSSVRLLSLYDNQITTVAPGSFDTLHSLSTLNLLAN 560
Score = 98 (39.6 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 29/116 (25%), Positives = 54/116 (46%)
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 317
P +P+ + L + NQF+ V + L+ LT + +N+I L + SF ++ L
Sbjct: 645 PKGIPK--DVTELYLDGNQFTLVPK-ELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLT 701
Query: 318 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 373
L L++NR+ + + L +L L L N + + + L +L L + N +
Sbjct: 702 LILSYNRLRCIPARTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPL 757
Score = 92 (37.4 bits), Expect = 2.3e-10, Sum P(3) = 2.3e-10
Identities = 24/79 (30%), Positives = 37/79 (46%)
Query: 174 DLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVV 233
DLS NQ+ + +F+G + L L YN++ + L L VL L N +T V
Sbjct: 25 DLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSV 84
Query: 234 AALQGLRSVTDLDL-SHNL 251
A+ + + L S+NL
Sbjct: 85 ASFNHMPKLRTFRLHSNNL 103
Score = 89 (36.4 bits), Expect = 2.1e-11, Sum P(3) = 2.1e-11
Identities = 26/101 (25%), Positives = 49/101 (48%)
Query: 294 LSCHHNQIDVLEDHS-FRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRAL 352
L ++N+ VLE F+ L L ++L++N+I + + S + L L+ N L +
Sbjct: 434 LRLNNNEFSVLEATGIFKKLPQLRKINLSNNKITDIEEGAFDGASGVNELLLTSNRLETV 493
Query: 353 TQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELIY 393
+ L+SL+ L L N +S + G +++ L +Y
Sbjct: 494 RDKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRLLSLY 534
Score = 78 (32.5 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 24/93 (25%), Positives = 44/93 (47%)
Query: 90 GLEPDERVSLLDCTLSNVTVLPGKFLEG-VTLHGLVISSGELKNISDGAFIGLSSPLQAL 148
G+ + ++ + D + + + +P K G V + L + ++ I DGAF L L+ L
Sbjct: 14 GVWNELKIKISDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRD-LEVL 72
Query: 149 GLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLY 181
L NN ++ + ++ + P L L N LY
Sbjct: 73 TLNNNNITRLSVASFNHM-PKLRTFRLHSNNLY 104
Score = 72 (30.4 bits), Expect = 2.3e-10, Sum P(3) = 2.3e-10
Identities = 17/77 (22%), Positives = 39/77 (50%)
Query: 618 VAQQEDDINRNNSDSRYVKLQATTIL--LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLS 675
+ Q ++ NN++ + L+AT I L L+ +++++N+ + + GA G + L
Sbjct: 427 IPQYTAELRLNNNE--FSVLEATGIFKKLPQLRKINLSNNKITDIEEGAFDGASGVNELL 484
Query: 676 CHHNQIDVLEDHSFSNV 692
N+++ + D F +
Sbjct: 485 LTSNRLETVRDKMFKGL 501
Score = 69 (29.3 bits), Expect = 4.5e-10, Sum P(3) = 4.5e-10
Identities = 17/49 (34%), Positives = 24/49 (48%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L SLK L + N+ S V + GL + LS + NQI + SF +
Sbjct: 501 LESLKTLMLRSNRVSCVGNDSFTGLSSVRLLSLYDNQITTVAPGSFDTL 549
Score = 60 (26.2 bits), Expect = 2.1e-11, Sum P(3) = 2.1e-11
Identities = 13/49 (26%), Positives = 26/49 (53%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
++ L L +++N+ + GL L LS H N I V+ + +F+++
Sbjct: 696 MTQLLTLILSYNRLRCIPARTFDGLKSLRLLSLHGNDISVVPEGAFNDL 744
Score = 57 (25.1 bits), Expect = 4.2e-11, Sum P(3) = 4.2e-11
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 655 NQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
NQF+ V + L+ LT + +N+I L + SFSN+
Sbjct: 660 NQFTLVPK-ELSNYKHLTLIDLSNNRISTLSNQSFSNM 696
Score = 57 (25.1 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 19/75 (25%), Positives = 35/75 (46%)
Query: 315 LSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 374
++ L L N+ V L++ +LT +DLS+N + L+ + + L L L N +
Sbjct: 652 VTELYLDGNQFTLVP-KELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLR 710
Query: 375 MEPECIYVGFNTMDL 389
P + G ++ L
Sbjct: 711 CIPARTFDGLKSLRL 725
Score = 54 (24.1 bits), Expect = 8.5e-11, Sum P(3) = 8.5e-11
Identities = 12/32 (37%), Positives = 22/32 (68%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLS 675
LSS+++LS+ NQ ++V G+ L L++L+
Sbjct: 525 LSSVRLLSLYDNQITTVAPGSFDTLHSLSTLN 556
Score = 54 (24.1 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 12/48 (25%), Positives = 24/48 (50%)
Query: 645 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
S + L + N+ +VR GL+ L +L N++ + + SF+ +
Sbjct: 478 SGVNELLLTSNRLETVRDKMFKGLESLKTLMLRSNRVSCVGNDSFTGL 525
Score = 54 (24.1 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFS 690
L SL++L + N+ + +R A L L LS + N++ + +FS
Sbjct: 264 LFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFS 310
Score = 53 (23.7 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 14/46 (30%), Positives = 22/46 (47%)
Query: 647 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L+ + +++NQ S A GL L SL + N+I L F +
Sbjct: 219 LRRIDLSNNQISEAAPDAFQGLRSLNSLVLYGNKITELPKGLFEGL 264
Score = 50 (22.7 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L SL L + N+ + + +G GL L L + N+I+ L +F ++
Sbjct: 240 LRSLNSLVLYGNKITELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDL 288
Score = 47 (21.6 bits), Expect = 7.4e-08, Sum P(3) = 7.4e-08
Identities = 12/46 (26%), Positives = 24/46 (52%)
Query: 650 LSIAHNQFSSVRR-GALAGLDKLTSLSCHHNQIDVLEDHSFSNVIG 694
L + +N+FS + G L +L ++ +N+I +E+ +F G
Sbjct: 434 LRLNNNEFSVLEATGIFKKLPQLRKINLSNNKITDIEEGAFDGASG 479
>UNIPROTKB|F1RZN4 [details] [associations]
symbol:TLR3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA] [GO:0050729
"positive regulation of inflammatory response" evidence=IEA]
[GO:0045087 "innate immune response" evidence=IEA] [GO:0043330
"response to exogenous dsRNA" evidence=IEA] [GO:0034138 "toll-like
receptor 3 signaling pathway" evidence=IEA] [GO:0032722 "positive
regulation of chemokine production" evidence=IEA] [GO:0004888
"transmembrane signaling receptor activity" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0002756
"MyD88-independent toll-like receptor signaling pathway"
evidence=IEA] InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 GO:GO:0016021 GO:GO:0007165 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005622
InterPro:IPR000372 SMART:SM00013 SUPFAM:SSF52200
GeneTree:ENSGT00680000099674 PANTHER:PTHR24365:SF5 EMBL:CU466336
Ensembl:ENSSSCT00000017206 Uniprot:F1RZN4
Length = 902
Score = 199 (75.1 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 79/273 (28%), Positives = 128/273 (46%)
Query: 114 FLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRL 173
FL +L L +SS +++ S G F + L L L N LS T L N
Sbjct: 194 FLGNSSLKRLELSSNQIQEFSPGCFHAIGK-LFGLSLNNVKLSPSLTEKLCLELSNTSIE 252
Query: 174 DLSHNQLYKLENTSFKGL--SSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVS 231
+LS + + + F GL ++L+ LDLS+N L + D A L L+ L+ N +
Sbjct: 253 NLSLSNAVQNQQHDF-GLKQTNLSMLDLSHNSLSVIGNDSFAWLPHLKYFFLEYNNIERL 311
Query: 232 VVAALQGLRSVTDLDLSHNLLAGPLGPSTVPR--------LSSLKVLSIAHNQFSSVRRG 283
+L GL +V L+L + + +++P+ L SL+ L++ N F ++R
Sbjct: 312 SSRSLYGLSNVKYLNLRRSFTKQSISLASLPKIEDFSFQWLKSLEYLNMEDNNFPGIKRN 371
Query: 284 ALAGLDKLTSLSCHHN--QIDVLEDHSFRAL--STLSHLDLAHNRIVAVSGASLAHLSNL 339
GL KL SLS ++ + L + +F +L S L L+L N+I + + + L +L
Sbjct: 372 TFTGLIKLKSLSLSNSFSSLRTLTNETFISLADSPLLILNLTKNKISKIESGAFSWLGHL 431
Query: 340 TTLDLSHNFL-RALTQDLITPLKSLQELRLDDN 371
LDL N + + LT LK++ E+ L N
Sbjct: 432 KVLDLGLNEIGQELTGQEWRGLKNIVEVYLSYN 464
Score = 194 (73.4 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 74/277 (26%), Positives = 135/277 (48%)
Query: 118 VTLHGLVISSG--ELKNISDGAFIGLS-SPLQALGLPNNLLSVVPTSALAPLAPNLDRLD 174
+ L L +S+ L+ +++ FI L+ SPL L L N +S + + A + L +L LD
Sbjct: 377 IKLKSLSLSNSFSSLRTLTNETFISLADSPLLILNLTKNKISKIESGAFSWLG-HLKVLD 435
Query: 175 LSHNQL-YKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQ--GNRLTVS 231
L N++ +L ++GL ++ + LSYN+ + L+ D A + +L+ L L+ R
Sbjct: 436 LGLNEIGQELTGQEWRGLKNIVEVYLSYNRYLELTTDSFALVPSLQQLMLRRVALRNMDC 495
Query: 232 VVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGA------- 284
+ L ++T LDLS+N +A + + L L++L + HN + + + A
Sbjct: 496 SPSPFHPLFNLTILDLSNNNIAN-INDELLKGLEKLQILDLQHNNLARLWKHANPGGPVQ 554
Query: 285 -LAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLD 343
L GL L L+ N D + +FR LS L +DL N + + + + +L +L
Sbjct: 555 FLKGLSHLHILNLESNGFDEIPADAFRDLSELKSIDLGLNNLNILPPSVFDNQVSLKSLS 614
Query: 344 LSHNFLRALTQDLITPLKSLQELRLDDNDISMEP-EC 379
L N + ++ + + P + Q +L + D+ P +C
Sbjct: 615 LQKNLITSVKKTVFGP--AFQ--KLSNLDMRFNPFDC 647
Score = 189 (71.6 bits), Expect = 6.0e-13, Sum P(2) = 6.0e-13
Identities = 87/301 (28%), Positives = 141/301 (46%)
Query: 111 PGKFLEGVTLHGLVISSGELK-NISDGAFIGLSSP-LQALGLPNNLLSVVPTSALAPLAP 168
PG F L GL +++ +L ++++ + LS+ ++ L L N + + L
Sbjct: 215 PGCFHAIGKLFGLSLNNVKLSPSLTEKLCLELSNTSIENLSLSNAVQNQQHDFGLKQT-- 272
Query: 169 NLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGN-- 226
NL LDLSHN L + N SF L L + L YN + LS L L ++ L L+ +
Sbjct: 273 NLSMLDLSHNSLSVIGNDSFAWLPHLKYFFLEYNNIERLSSRSLYGLSNVKYLNLRRSFT 332
Query: 227 RLTVSVVA-------ALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSS 279
+ ++S+ + + Q L+S+ L++ N G + +T L LK LS++ N FSS
Sbjct: 333 KQSISLASLPKIEDFSFQWLKSLEYLNMEDNNFPG-IKRNTFTGLIKLKSLSLS-NSFSS 390
Query: 280 VR----RGALAGLDK-LTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI-VAVSGASL 333
+R ++ D L L+ N+I +E +F L L LDL N I ++G
Sbjct: 391 LRTLTNETFISLADSPLLILNLTKNKISKIESGAFSWLGHLKVLDLGLNEIGQELTGQEW 450
Query: 334 AHLSNLTTLDLSHNFLRALTQDLITPLKSLQEL---RLDDNDISMEPECIYVGFNTMDLE 390
L N+ + LS+N LT D + SLQ+L R+ ++ P + FN L+
Sbjct: 451 RGLKNIVEVYLSYNRYLELTTDSFALVPSLQQLMLRRVALRNMDCSPSPFHPLFNLTILD 510
Query: 391 L 391
L
Sbjct: 511 L 511
Score = 167 (63.8 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 60/210 (28%), Positives = 96/210 (45%)
Query: 166 LAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQG 225
L N+ L+L+HNQL +L +F S L LD +N + L + L L +L LQ
Sbjct: 50 LPANITVLNLTHNQLRRLPPANFTIYSQLTTLDGGFNTISKLEPELCQSLPLLEILNLQH 109
Query: 226 NRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGAL 285
N L+ ++ +L L N + + + L +L L ++HN SS + G
Sbjct: 110 NELSQLSDKTFIFCMNLIELHLMSNSIQ-KIQNNPFKNLKNLIKLDLSHNGLSSTKLGTQ 168
Query: 286 AGLDKLTSLSCHHNQIDVL--EDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLD 343
L+ L L +N+I L E+ F S+L L+L+ N+I S + L L
Sbjct: 169 LQLENLQELLLANNKISALKREELDFLGNSSLKRLELSSNQIQEFSPGCFHAIGKLFGLS 228
Query: 344 LSHNFLR-ALTQDLITPLK--SLQELRLDD 370
L++ L +LT+ L L S++ L L +
Sbjct: 229 LNNVKLSPSLTEKLCLELSNTSIENLSLSN 258
Score = 151 (58.2 bits), Expect = 7.7e-09, Sum P(2) = 7.7e-09
Identities = 50/154 (32%), Positives = 71/154 (46%)
Query: 241 SVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQ 300
++T L+L+HN L L P+ S L L N S + L L L+ HN+
Sbjct: 53 NITVLNLTHNQLRR-LPPANFTIYSQLTTLDGGFNTISKLEPELCQSLPLLEILNLQHNE 111
Query: 301 IDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPL 360
+ L D +F L L L N I + +L NL LDLSHN L + L
Sbjct: 112 LSQLSDKTFIFCMNLIELHLMSNSIQKIQNNPFKNLKNLIKLDLSHNGLSSTKLGTQLQL 171
Query: 361 KSLQELRLDDNDISM--EPECIYVGFNTMD-LEL 391
++LQEL L +N IS E ++G +++ LEL
Sbjct: 172 ENLQELLLANNKISALKREELDFLGNSSLKRLEL 205
Score = 139 (54.0 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 62/219 (28%), Positives = 93/219 (42%)
Query: 97 VSLLDCTLSNV-TVLPGKFLEGV-TLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNL 154
+ +LD L+ + L G+ G+ + + +S ++ +F L LQ L L
Sbjct: 431 LKVLDLGLNEIGQELTGQEWRGLKNIVEVYLSYNRYLELTTDSF-ALVPSLQQLMLRRVA 489
Query: 155 LSVVPTSALAPLAP--NLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDC- 211
L + S +P P NL LDLS+N + + + KGL L LDL +N L L +
Sbjct: 490 LRNMDCSP-SPFHPLFNLTILDLSNNNIANINDELLKGLEKLQILDLQHNNLARLWKHAN 548
Query: 212 -------LAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRL 264
L L L +L L+ N A + L + +DL N L L PS
Sbjct: 549 PGGPVQFLKGLSHLHILNLESNGFDEIPADAFRDLSELKSIDLGLNNL-NILPPSVFDNQ 607
Query: 265 SSLKVLSIAHNQFSSVRRGALA-GLDKLTSLSCHHNQID 302
SLK LS+ N +SV++ KL++L N D
Sbjct: 608 VSLKSLSLQKNLITSVKKTVFGPAFQKLSNLDMRFNPFD 646
Score = 113 (44.8 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 33/117 (28%), Positives = 55/117 (47%)
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 317
P +P +++ VL++ HNQ + +LT+L N I LE ++L L
Sbjct: 47 PDDLP--ANITVLNLTHNQLRRLPPANFTIYSQLTTLDGGFNTISKLEPELCQSLPLLEI 104
Query: 318 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 374
L+L HN + +S + NL L L N ++ + + LK+L +L L N +S
Sbjct: 105 LNLQHNELSQLSDKTFIFCMNLIELHLMSNSIQKIQNNPFKNLKNLIKLDLSHNGLS 161
Score = 67 (28.6 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 14/45 (31%), Positives = 25/45 (55%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHS 688
L +L +L +++N +++ L GL+KL L HN + L H+
Sbjct: 503 LFNLTILDLSNNNIANINDELLKGLEKLQILDLQHNNLARLWKHA 547
Score = 64 (27.6 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLS 675
L SL+ L++ N F ++R GL KL SLS
Sbjct: 352 LKSLEYLNMEDNNFPGIKRNTFTGLIKLKSLS 383
Score = 61 (26.5 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 14/50 (28%), Positives = 24/50 (48%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNVI 693
LS L +L++ N F + A L +L S+ N +++L F N +
Sbjct: 559 LSHLHILNLESNGFDEIPADAFRDLSELKSIDLGLNNLNILPPSVFDNQV 608
Score = 59 (25.8 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 23/73 (31%), Positives = 35/73 (47%)
Query: 624 DINRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGAL--AGLDKLTSLSCHHNQI 681
D++ N S KL T + L +L+ L +A+N+ S+++R L G L L NQI
Sbjct: 154 DLSHNGLSS--TKL-GTQLQLENLQELLLANNKISALKREELDFLGNSSLKRLELSSNQI 210
Query: 682 DVLEDHSFSNVIG 694
F + IG
Sbjct: 211 QEFSPGCF-HAIG 222
Score = 53 (23.7 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 15/51 (29%), Positives = 24/51 (47%)
Query: 645 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF---SNV 692
++L +L ++HN S + + A L L +N I+ L S SNV
Sbjct: 272 TNLSMLDLSHNSLSVIGNDSFAWLPHLKYFFLEYNNIERLSSRSLYGLSNV 322
Score = 49 (22.3 bits), Expect = 3.6e-12, Sum P(2) = 3.6e-12
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 646 SLKVLSIAHNQFSSVRRGALA-GLDKLTSLSCHHNQID 682
SLK LS+ N +SV++ KL++L N D
Sbjct: 609 SLKSLSLQKNLITSVKKTVFGPAFQKLSNLDMRFNPFD 646
Score = 49 (22.3 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 645 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
S L +L++ N+ S + GA + L L L N+I
Sbjct: 405 SPLLILNLTKNKISKIESGAFSWLGHLKVLDLGLNEI 441
Score = 43 (20.2 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 15/51 (29%), Positives = 24/51 (47%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAG--LDKLTSLSCHHNQIDVLEDHSFSNV 692
L L++L + HN + + + A G + L LS H I LE + F +
Sbjct: 527 LEKLQILDLQHNNLARLWKHANPGGPVQFLKGLS--HLHILNLESNGFDEI 575
>TAIR|locus:2144392 [details] [associations]
symbol:RLP53 "receptor like protein 53" species:3702
"Arabidopsis thaliana" [GO:0005576 "extracellular region"
evidence=ISM] [GO:0006952 "defense response" evidence=ISS]
[GO:0016301 "kinase activity" evidence=ISS] [GO:0007165 "signal
transduction" evidence=IC] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 EMBL:CP002688 GenomeReviews:BA000015_GR
eggNOG:COG4886 InterPro:IPR025875 Pfam:PF12799 InterPro:IPR013210
Pfam:PF08263 HOGENOM:HOG000116562 ProtClustDB:CLSN2683476
EMBL:AF160760 IPI:IPI00533066 RefSeq:NP_198058.1 UniGene:At.65554
ProteinModelPortal:Q9S9U3 SMR:Q9S9U3 STRING:Q9S9U3
EnsemblPlants:AT5G27060.1 GeneID:832764 KEGG:ath:AT5G27060
TAIR:At5g27060 InParanoid:Q9S9U3 OMA:FLDYINM PhylomeDB:Q9S9U3
Genevestigator:Q9S9U3 Uniprot:Q9S9U3
Length = 957
Score = 209 (78.6 bits), Expect = 5.2e-14, Sum P(2) = 5.2e-14
Identities = 67/231 (29%), Positives = 106/231 (45%)
Query: 143 SPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYN 202
S L L L +N S +++ L+ L L+L NQ +S LS L FLDLSYN
Sbjct: 145 SHLTYLDLSSNHFSGQILNSIGNLS-RLTYLNLFDNQFSGQAPSSICNLSHLTFLDLSYN 203
Query: 203 KLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVP 262
+ + L L L L N+ + + +++ L ++T LDLS+N +G + PS +
Sbjct: 204 RFFGQFPSSIGGLSHLTTLSLFSNKFSGQIPSSIGNLSNLTTLDLSNNNFSGQI-PSFIG 262
Query: 263 RLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 322
LS L L + N F + L++LT L N++ + L+ LS L L++
Sbjct: 263 NLSQLTFLGLFSNNFVGEIPSSFGNLNQLTRLYVDDNKLSGNFPNVLLNLTGLSLLSLSN 322
Query: 323 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 373
N+ ++ LSNL D S N + + SL +RL+ N +
Sbjct: 323 NKFTGTLPPNITSLSNLMDFDASDNAFTGTFPSFLFTIPSLTYIRLNGNQL 373
Score = 200 (75.5 bits), Expect = 4.9e-13, Sum P(2) = 4.9e-13
Identities = 64/205 (31%), Positives = 99/205 (48%)
Query: 173 LDLSHNQLYKL--ENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTV 230
LDLS + L+ N+S + L L LDLS+N + L L L L N +
Sbjct: 100 LDLSCSSLHGRFHSNSSIRNLHFLTTLDLSFNDFKGQITSSIENLSHLTYLDLSSNHFSG 159
Query: 231 SVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDK 290
++ ++ L +T L+L N +G PS++ LS L L +++N+F ++ GL
Sbjct: 160 QILNSIGNLSRLTYLNLFDNQFSGQ-APSSICNLSHLTFLDLSYNRFFGQFPSSIGGLSH 218
Query: 291 LTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDL-SHNFL 349
LT+LS N+ S LS L+ LDL++N + + +LS LT L L S+NF+
Sbjct: 219 LTTLSLFSNKFSGQIPSSIGNLSNLTTLDLSNNNFSGQIPSFIGNLSQLTFLGLFSNNFV 278
Query: 350 RALTQDLITPLKSLQELRLDDNDIS 374
+ L L L +DDN +S
Sbjct: 279 GEIPSSFGN-LNQLTRLYVDDNKLS 302
Score = 191 (72.3 bits), Expect = 4.7e-12, Sum P(2) = 4.7e-12
Identities = 66/223 (29%), Positives = 99/223 (44%)
Query: 170 LDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLT 229
L LDLS N +S + LS L +LDLS N + + L L L L N+ +
Sbjct: 123 LTTLDLSFNDFKGQITSSIENLSHLTYLDLSSNHFSGQILNSIGNLSRLTYLNLFDNQFS 182
Query: 230 VSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLD 289
+++ L +T LDLS+N G PS++ LS L LS+ N+FS ++ L
Sbjct: 183 GQAPSSICNLSHLTFLDLSYNRFFGQF-PSSIGGLSHLTTLSLFSNKFSGQIPSSIGNLS 241
Query: 290 KLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFL 349
LT+L +N LS L+ L L N V +S +L+ LT L + N L
Sbjct: 242 NLTTLDLSNNNFSGQIPSFIGNLSQLTFLGLFSNNFVGEIPSSFGNLNQLTRLYVDDNKL 301
Query: 350 RALTQDLITPLKSLQELRLDDNDIS--MEPECIYVGFNTMDLE 390
+++ L L L L +N + + P + N MD +
Sbjct: 302 SGNFPNVLLNLTGLSLLSLSNNKFTGTLPPNITSLS-NLMDFD 343
Score = 155 (59.6 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 71/250 (28%), Positives = 107/250 (42%)
Query: 137 AFIGLSSPLQALGL-PNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLN 195
+FIG S L LGL NN + +P+S L L RL + N+L L+ L+
Sbjct: 259 SFIGNLSQLTFLGLFSNNFVGEIPSS-FGNLN-QLTRLYVDDNKLSGNFPNVLLNLTGLS 316
Query: 196 FLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGP 255
L LS NK + L L N T + + L + S+T + L+ N L G
Sbjct: 317 LLSLSNNKFTGTLPPNITSLSNLMDFDASDNAFTGTFPSFLFTIPSLTYIRLNGNQLKGT 376
Query: 256 LGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHS-FRALST 314
L + S+L L I +N F +++ L KL L H D S F L +
Sbjct: 377 LEFGNISSPSNLYELDIGNNNFIGPIPSSISKLVKLFRLDISHLNTQGPVDFSIFSHLKS 436
Query: 315 LSHLDLAH-NRIVAVS-GASLAHLSNLTTLDLSHNFLRALTQDLIT--PLKSLQELRLDD 370
L L+++H N + L++ L LDLS N + A + ++ P + +Q L L
Sbjct: 437 LLDLNISHLNTTTRIDLNYFLSYFKRLLLLDLSGNHVSATNKSSVSDPPSQLIQSLYLSG 496
Query: 371 NDISMEPECI 380
I+ PE +
Sbjct: 497 CGITEFPEFV 506
Score = 117 (46.2 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 57/199 (28%), Positives = 84/199 (42%)
Query: 173 LDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSV 232
LD+S+N++ L L +++LS N L+ + P +L L N +
Sbjct: 515 LDISNNKIKGQVPDWLWRLPILYYVNLSNNTLIGFQRPS-KPEPSLLYLLGSNNNFIGKI 573
Query: 233 VAALQGLRSVTDLDLSHNLLAGPLGPSTVPRL-SSLKVLSIAHNQFSSVRRGALAGLDKL 291
+ + GLRS+ LDLS N G + P + L S+L VL++ N S + + L
Sbjct: 574 PSFICGLRSLNTLDLSDNNFNGSI-PRCMGHLKSTLSVLNLRQNHLSGGLPKQI--FEIL 630
Query: 292 TSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRA 351
SL HNQ+ S STL L++ NRI L+ L L L L N
Sbjct: 631 RSLDVGHNQLVGKLPRSLSFFSTLEVLNVESNRINDTFPFWLSSLPKLQVLVLRSNAFHG 690
Query: 352 LTQDLITPLKSLQELRLDD 370
+ P ELR+ D
Sbjct: 691 PIHEATFP-----ELRIID 704
Score = 115 (45.5 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 64/238 (26%), Positives = 101/238 (42%)
Query: 138 FIGLSSPLQALGLPNNLLSVVPTSALA-PLAPNLDRLDLSHNQLYKLENTSFKGLSSLNF 196
F+ L L L N +S S+++ P + + L LS + + + L F
Sbjct: 456 FLSYFKRLLLLDLSGNHVSATNKSSVSDPPSQLIQSLYLSGCGITEFPEF-VRTQHELGF 514
Query: 197 LDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPL 256
LD+S NK+ D L L L + L N L + + S+ L S+N G +
Sbjct: 515 LDISNNKIKGQVPDWLWRLPILYYVNLSNNTL-IGFQRPSKPEPSLLYLLGSNNNFIGKI 573
Query: 257 GPSTVPRLSSLKVLSIAHNQFS-SVRRGALAGLDK-LTSLSCHHNQIDV-LEDHSFRALS 313
PS + L SL L ++ N F+ S+ R + L L+ L+ N + L F L
Sbjct: 574 -PSFICGLRSLNTLDLSDNNFNGSIPR-CMGHLKSTLSVLNLRQNHLSGGLPKQIFEILR 631
Query: 314 TLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
+L D+ HN++V SL+ S L L++ N + ++ L LQ L L N
Sbjct: 632 SL---DVGHNQLVGKLPRSLSFFSTLEVLNVESNRINDTFPFWLSSLPKLQVLVLRSN 686
Score = 57 (25.1 bits), Expect = 5.2e-14, Sum P(2) = 5.2e-14
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 643 LLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
LL L VLS+++N FS ++ L L SL N++
Sbjct: 788 LLKELLVLSLSNNAFSGHMPSSMGNLTALESLDVSKNKL 826
Score = 41 (19.5 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 10/38 (26%), Positives = 20/38 (52%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
L++L+ L ++ N+ + L L L ++ HNQ+
Sbjct: 813 LTALESLDVSKNKLTGEIPQELGDLSFLAYMNFSHNQL 850
Score = 41 (19.5 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 9/36 (25%), Positives = 17/36 (47%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 679
L+ L +LS+++N+F+ + L L N
Sbjct: 312 LTGLSLLSLSNNKFTGTLPPNITSLSNLMDFDASDN 347
Score = 38 (18.4 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 5/12 (41%), Positives = 11/12 (91%)
Query: 647 LKVLSIAHNQFS 658
L+++ I+HN+F+
Sbjct: 700 LRIIDISHNRFN 711
Score = 38 (18.4 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 647 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID 682
L+ L + HNQ +L+ L L+ N+I+
Sbjct: 630 LRSLDVGHNQLVGKLPRSLSFFSTLEVLNVESNRIN 665
>UNIPROTKB|P40197 [details] [associations]
symbol:GP5 "Platelet glycoprotein V" species:9606 "Homo
sapiens" [GO:0005518 "collagen binding" evidence=IEA] [GO:0007160
"cell-matrix adhesion" evidence=IEA] [GO:0010544 "negative
regulation of platelet activation" evidence=IEA] [GO:0005887
"integral to plasma membrane" evidence=TAS] [GO:0007155 "cell
adhesion" evidence=NAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007596 "blood coagulation" evidence=TAS] [GO:0007597 "blood
coagulation, intrinsic pathway" evidence=TAS] [GO:0030168 "platelet
activation" evidence=TAS] Reactome:REACT_604 Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0030168 GO:GO:0005887
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007597 GO:GO:0007155 GO:GO:0007160
InterPro:IPR000372 SMART:SM00013 GO:GO:0010544 EMBL:L11238
EMBL:Z23091 IPI:IPI00027410 PIR:A48030 RefSeq:NP_004479.1
UniGene:Hs.73734 ProteinModelPortal:P40197 SMR:P40197 STRING:P40197
PhosphoSite:P40197 DMDM:729616 PaxDb:P40197 PeptideAtlas:P40197
PRIDE:P40197 DNASU:2814 Ensembl:ENST00000323007
Ensembl:ENST00000401815 GeneID:2814 KEGG:hsa:2814 UCSC:uc003ftv.1
CTD:2814 GeneCards:GC03M194115 HGNC:HGNC:4443 MIM:173511
neXtProt:NX_P40197 PharmGKB:PA28823 HOGENOM:HOG000112798
HOVERGEN:HBG005906 InParanoid:P40197 KO:K06260 OMA:AMIKIGQ
OrthoDB:EOG4JHCFD PhylomeDB:P40197 GenomeRNAi:2814 NextBio:11093
PMAP-CutDB:P40197 ArrayExpress:P40197 Bgee:P40197 CleanEx:HS_GP5
Genevestigator:P40197 GermOnline:ENSG00000178732 Uniprot:P40197
Length = 560
Score = 213 (80.0 bits), Expect = 5.3e-14, P = 5.3e-14
Identities = 80/259 (30%), Positives = 115/259 (44%)
Query: 95 ERVSLLDCTLSNVTVLPGKFLEG-VTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNN 153
E + LLD + +N+T LP L L L++ S L ++ G L + + N+
Sbjct: 170 ENLKLLDLSGNNLTHLPKGLLGAQAKLERLLLHSNRLVSLDSGLLNSLGALTELQFHRNH 229
Query: 154 LLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLA 213
+ S+ P A L PNL L LS N L L + F +L L L N L L
Sbjct: 230 IRSIAP-GAFDRL-PNLSSLTLSRNHLAFLPSALFLHSHNLTLLTLFENPLAELPGVLFG 287
Query: 214 PLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLD--LSHNLLAGPLGPSTVPRLSSLKVLS 271
+ L+ L L +L AA + L + L LS L A P G L L+VL+
Sbjct: 288 EMGGLQELWLNRTQLRTLPAAAFRNLSRLRYLGVTLSPRLSALPQG--AFQGLGELQVLA 345
Query: 272 IAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGA 331
+ N +++ G L GL KL +S N++ L FR LS+L + L HN++ + G
Sbjct: 346 LHSNGLTALPDGLLRGLGKLRQVSLRRNRLRALPRALFRNLSSLESVQLDHNQLETLPGD 405
Query: 332 SLAHLSNLTTLDLSHNFLR 350
L LT + L HN R
Sbjct: 406 VFGALPRLTEVLLGHNSWR 424
Score = 197 (74.4 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 82/299 (27%), Positives = 133/299 (44%)
Query: 81 LYAISESLRGLEPD---ERVSLLDCTLSN--VTVLPGKFLEGV-TLHGLVISSGELKNIS 134
L+ +LRG++ + + V+L + L+ + LP + L L +S L ++
Sbjct: 127 LFLDHNALRGIDQNMFQKLVNLQELALNQNQLDFLPASLFTNLENLKLLDLSGNNLTHLP 186
Query: 135 DGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSL 194
G +G + L+ L L +N L + + L L L L N + + +F L +L
Sbjct: 187 KG-LLGAQAKLERLLLHSNRLVSLDSGLLNSLGA-LTELQFHRNHIRSIAPGAFDRLPNL 244
Query: 195 NFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQG-LRSVTDLDLSHNLLA 253
+ L LS N L L L +L L N L + L G + + +L L+ L
Sbjct: 245 SSLTLSRNHLAFLPSALFLHSHNLTLLTLFENPLA-ELPGVLFGEMGGLQELWLNRTQLR 303
Query: 254 GPLGPSTVPRLSSLKVLSIAHN-QFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRAL 312
L + LS L+ L + + + S++ +GA GL +L L+ H N + L D R L
Sbjct: 304 -TLPAAAFRNLSRLRYLGVTLSPRLSALPQGAFQGLGELQVLALHSNGLTALPDGLLRGL 362
Query: 313 STLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
L + L NR+ A+ A +LS+L ++ L HN L L D+ L L E+ L N
Sbjct: 363 GKLRQVSLRRNRLRALPRALFRNLSSLESVQLDHNQLETLPGDVFGALPRLTEVLLGHN 421
Score = 192 (72.6 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 91/324 (28%), Positives = 143/324 (44%)
Query: 145 LQALGLPNNLL---------SVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLN 195
+ ALGLP NL V+ + + + + L RL +S + + + +F L L
Sbjct: 43 ISALGLPTNLTHILLFGMGRGVLQSQSFSGMTV-LQRLMISDSHISAVAPGTFSDLIKLK 101
Query: 196 FLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGP 255
L LS NK+ L L +V L L L N L Q L ++ +L L+ N L
Sbjct: 102 TLRLSRNKITHLPGALLDKMVLLEQLFLDHNALRGIDQNMFQKLVNLQELALNQNQLDF- 160
Query: 256 LGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTL 315
L S L +LK+L ++ N + + +G L KL L H N++ L+ +L L
Sbjct: 161 LPASLFTNLENLKLLDLSGNNLTHLPKGLLGAQAKLERLLLHSNRLVSLDSGLLNSLGAL 220
Query: 316 SHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISM 375
+ L N I +++ + L NL++L LS N L L L +L L L +N ++
Sbjct: 221 TELQFHRNHIRSIAPGAFDRLPNLSSLTLSRNHLAFLPSALFLHSHNLTLLTLFENPLAE 280
Query: 376 EPECIYVGFNTMDLELIYSGVWRHSTLLIPVMLSLCTRSSVVTRYRYC-VVLIEGSNILD 434
P ++ + EL W + T L + + R+ ++R RY V L + L
Sbjct: 281 LPGVLFGEMGGLQ-EL-----WLNRTQL-RTLPAAAFRN--LSRLRYLGVTLSPRLSALP 331
Query: 435 QSALV-LGCSEILALVPT-LTSQP 456
Q A LG ++LAL LT+ P
Sbjct: 332 QGAFQGLGELQVLALHSNGLTALP 355
Score = 188 (71.2 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 75/286 (26%), Positives = 118/286 (41%)
Query: 114 FLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRL 173
F + V L L ++ +L + F L + L+ L L N L+ +P L A L+RL
Sbjct: 142 FQKLVNLQELALNQNQLDFLPASLFTNLEN-LKLLDLSGNNLTHLPKGLLGAQA-KLERL 199
Query: 174 DLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVV 233
L N+L L++ L +L L N + +++ L L L L N L
Sbjct: 200 LLHSNRLVSLDSGLLNSLGALTELQFHRNHIRSIAPGAFDRLPNLSSLTLSRNHLAFLPS 259
Query: 234 AALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTS 293
A ++T L L N LA L + L+ L + Q ++ A L +L
Sbjct: 260 ALFLHSHNLTLLTLFENPLA-ELPGVLFGEMGGLQELWLNRTQLRTLPAAAFRNLSRLRY 318
Query: 294 LSCHHN-QIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRAL 352
L + ++ L +F+ L L L L N + A+ L L L + L N LRAL
Sbjct: 319 LGVTLSPRLSALPQGAFQGLGELQVLALHSNGLTALPDGLLRGLGKLRQVSLRRNRLRAL 378
Query: 353 TQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELIYSGVWR 398
+ L L SL+ ++LD N + P ++ + L+ WR
Sbjct: 379 PRALFRNLSSLESVQLDHNQLETLPGDVFGALPRLTEVLLGHNSWR 424
Score = 65 (27.9 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L+VL++ N +++ G L GL KL +S N++ L F N+
Sbjct: 338 LGELQVLALHSNGLTALPDGLLRGLGKLRQVSLRRNRLRALPRALFRNL 386
Score = 61 (26.5 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
L L+ +S+ N+ ++ R L L S+ HNQ++ L F
Sbjct: 362 LGKLRQVSLRRNRLRALPRALFRNLSSLESVQLDHNQLETLPGDVF 407
Score = 56 (24.8 bits), Expect = 8.8e-13, Sum P(2) = 8.8e-13
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 679
LSSL+ + + HNQ ++ L +LT + HN
Sbjct: 386 LSSLESVQLDHNQLETLPGDVFGALPRLTEVLLGHN 421
>MGI|MGI:2444651 [details] [associations]
symbol:Lingo4 "leucine rich repeat and Ig domain containing
4" species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 MGI:MGI:2444651 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00690000101682 HOGENOM:HOG000246971
HOVERGEN:HBG057546 CTD:339398 eggNOG:NOG306417 OrthoDB:EOG49KFQ7
EMBL:BC117866 EMBL:BC117867 EMBL:AK042286 IPI:IPI00273210
RefSeq:NP_796224.1 UniGene:Mm.213001 ProteinModelPortal:Q149C3
SMR:Q149C3 PhosphoSite:Q149C3 PRIDE:Q149C3
Ensembl:ENSMUST00000050975 GeneID:320747 KEGG:mmu:320747
UCSC:uc008qgb.1 InParanoid:Q149C3 NextBio:397357 Bgee:Q149C3
CleanEx:MM_LINGO4 Genevestigator:Q149C3 Uniprot:Q149C3
Length = 593
Score = 216 (81.1 bits), Expect = 5.4e-14, Sum P(2) = 5.4e-14
Identities = 82/270 (30%), Positives = 122/270 (45%)
Query: 102 CTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTS 161
C + +PG L L +S L + G L LQ L L N LS +
Sbjct: 46 CAHRRLDTIPGGLPLDTEL--LDLSGNRLWGLQRGMLSRLGQ-LQELDLSYNQLSTLEPG 102
Query: 162 ALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVL 221
A L +L L L N+L + F GL++L LDL N+++ + L +L+ L
Sbjct: 103 AFHGLQ-SLLTLRLQGNRLRIVGPGIFSGLTALTLLDLRLNQIVLFLDGAFSELGSLQQL 161
Query: 222 RLQGNRLTVSVVAALQGLRSVTDLDLSH-NLLAGP-LGPSTVPRLSSLKVLSIAHNQFSS 279
+ N L A GL ++ + L NL P L + +P L +L++ +
Sbjct: 162 EVGDNHLVFVAPGAFAGLAKLSTITLERCNLSTVPGLALAQLPALVALRLREL---DIER 218
Query: 280 VRRGALAGLDKLTSLSCHH-NQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSN 338
+ GAL GL +L L HH ++ L+ S L+ LS L + + +V +L HLS
Sbjct: 219 LPAGALRGLGQLKELEIHHWPSLEALDPGSLVGLN-LSSLAITRCNLSSVPFQALHHLSF 277
Query: 339 LTTLDLSHNFLRALTQDLITPLKSLQELRL 368
L LDLS N + A+ ++PL LQELRL
Sbjct: 278 LRILDLSQNPISAIPARRLSPLVRLQELRL 307
Score = 205 (77.2 bits), Expect = 5.5e-13, Sum P(2) = 5.5e-13
Identities = 74/237 (31%), Positives = 106/237 (44%)
Query: 142 SSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSY 201
+S +A+ + L +P PL L LDLS N+L+ L+ L L LDLSY
Sbjct: 38 TSQTRAVFCAHRRLDTIPGGL--PLDTEL--LDLSGNRLWGLQRGMLSRLGQLQELDLSY 93
Query: 202 NKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTV 261
N+L TL L +L LRLQGNRL + GL ++T LDL N + L
Sbjct: 94 NQLSTLEPGAFHGLQSLLTLRLQGNRLRIVGPGIFSGLTALTLLDLRLNQIVLFLD-GAF 152
Query: 262 PRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 321
L SL+ L + N V GA AGL KL++++ + + + L L L L
Sbjct: 153 SELGSLQQLEVGDNHLVFVAPGAFAGLAKLSTITLERCNLSTVPGLALAQLPALVALRLR 212
Query: 322 HNRIVAVSGASLAHLSNLTTLDLSH-NFLRALTQDLITPLKSLQELRLDDNDISMEP 377
I + +L L L L++ H L AL + L +L L + ++S P
Sbjct: 213 ELDIERLPAGALRGLGQLKELEIHHWPSLEALDPGSLVGL-NLSSLAITRCNLSSVP 268
Score = 140 (54.3 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 59/195 (30%), Positives = 86/195 (44%)
Query: 63 LCACDLPHTLRCTANKSDLYAI-SESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLH 121
L LP + + D+ + + +LRGL + + + S + PG L G+ L
Sbjct: 198 LALAQLPALVALRLRELDIERLPAGALRGLGQLKELEIHHWP-SLEALDPGS-LVGLNLS 255
Query: 122 GLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLY 181
L I+ L ++ A LS L+ L L N +S +P L+PL L L LS L
Sbjct: 256 SLAITRCNLSSVPFQALHHLSF-LRILDLSQNPISAIPARRLSPLV-RLQELRLSGACLT 313
Query: 182 KLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSV-VAALQGLR 240
+ +F GL++ + LD++ N L TL + L LRL GN LT + L LR
Sbjct: 314 SIAAHAFHGLTAFHLLDVADNALQTLEETAFPSPDKLVTLRLSGNPLTCDCRLLWLLRLR 373
Query: 241 SVTDLDLSHNLLAGP 255
D S AGP
Sbjct: 374 RRLDFGTSPPACAGP 388
Score = 128 (50.1 bits), Expect = 0.00011, P = 0.00011
Identities = 65/240 (27%), Positives = 103/240 (42%)
Query: 111 PGKFLEGVTLHGLV-ISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPN 169
PG F G+T L+ + ++ DGAF L S LQ L + +N L V A A LA
Sbjct: 125 PGIF-SGLTALTLLDLRLNQIVLFLDGAFSELGS-LQQLEVGDNHLVFVAPGAFAGLA-K 181
Query: 170 LDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQG-NRL 228
L + L L + + L +L L L + L L L L+ L + L
Sbjct: 182 LSTITLERCNLSTVPGLALAQLPALVALRLRELDIERLPAGALRGLGQLKELEIHHWPSL 241
Query: 229 TVSVVAALQGLRSVTDLDLSH-NLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAG 287
+L GL +++ L ++ NL + P + LS L++L ++ N S++ L+
Sbjct: 242 EALDPGSLVGL-NLSSLAITRCNLSSVPF--QALHHLSFLRILDLSQNPISAIPARRLSP 298
Query: 288 LDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHN 347
L +L L + + H+F L+ LD+A N + + + L TL LS N
Sbjct: 299 LVRLQELRLSGACLTSIAAHAFHGLTAFHLLDVADNALQTLEETAFPSPDKLVTLRLSGN 358
Score = 126 (49.4 bits), Expect = 0.00018, P = 0.00018
Identities = 56/188 (29%), Positives = 83/188 (44%)
Query: 90 GLEPDERVSLLDCTLSNVTVLPGKFLEGV-TLHGLVISSGELKNISDGAFIGLSSPLQAL 148
GL ++L C LS V PG L + L L + +++ + GA GL L+ L
Sbjct: 178 GLAKLSTITLERCNLSTV---PGLALAQLPALVALRLRELDIERLPAGALRGLGQ-LKEL 233
Query: 149 GLPN-NLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTL 207
+ + L + +L L NL L ++ L + + LS L LDLS N + +
Sbjct: 234 EIHHWPSLEALDPGSLVGL--NLSSLAITRCNLSSVPFQALHHLSFLRILDLSQNPISAI 291
Query: 208 SQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSL 267
L+PLV L+ LRL G LT A GL + LD++ N L L + P L
Sbjct: 292 PARRLSPLVRLQELRLSGACLTSIAAHAFHGLTAFHLLDVADNALQ-TLEETAFPSPDKL 350
Query: 268 KVLSIAHN 275
L ++ N
Sbjct: 351 VTLRLSGN 358
Score = 45 (20.9 bits), Expect = 5.5e-13, Sum P(2) = 5.5e-13
Identities = 12/46 (26%), Positives = 23/46 (50%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
LS L++L ++ N S++ L+ L +L L + + H+F
Sbjct: 275 LSFLRILDLSQNPISAIPARRLSPLVRLQELRLSGACLTSIAAHAF 320
Score = 43 (20.2 bits), Expect = 5.4e-14, Sum P(2) = 5.4e-14
Identities = 10/38 (26%), Positives = 18/38 (47%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
L++ +L +A N ++ A DKL +L N +
Sbjct: 323 LTAFHLLDVADNALQTLEETAFPSPDKLVTLRLSGNPL 360
>MGI|MGI:1315203 [details] [associations]
symbol:Slit1 "slit homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0005102 "receptor binding" evidence=TAS]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO;IDA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IMP;IDA]
[GO:0007411 "axon guidance" evidence=ISO;IGI;IDA] [GO:0008045
"motor neuron axon guidance" evidence=ISO] [GO:0021772 "olfactory
bulb development" evidence=IGI] [GO:0022028 "tangential migration
from the subventricular zone to the olfactory bulb" evidence=IMP]
[GO:0022029 "telencephalon cell migration" evidence=IGI]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0031290
"retinal ganglion cell axon guidance" evidence=IGI;IMP] [GO:0033563
"dorsal/ventral axon guidance" evidence=IGI] [GO:0040023
"establishment of nucleus localization" evidence=IDA] [GO:0043395
"heparan sulfate proteoglycan binding" evidence=ISO] [GO:0048495
"Roundabout binding" evidence=ISO;IPI] [GO:0048812 "neuron
projection morphogenesis" evidence=IGI] [GO:0048843 "negative
regulation of axon extension involved in axon guidance"
evidence=ISO] [GO:0048846 "axon extension involved in axon
guidance" evidence=ISO] [GO:0050919 "negative chemotaxis"
evidence=ISO;IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 MGI:MGI:1315203
GO:GO:0005737 GO:GO:0005615 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005102
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS50025
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0040023 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
Pfam:PF12661 GO:GO:0033563 GO:GO:0051964 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
GO:GO:0048843 CTD:6585 HOGENOM:HOG000116120 HOVERGEN:HBG057959
KO:K06838 OrthoDB:EOG4VDPXM EMBL:AF144627 EMBL:AK122376
EMBL:BC057131 EMBL:BC062091 IPI:IPI00330211 RefSeq:NP_056563.2
UniGene:Mm.40322 ProteinModelPortal:Q80TR4 SMR:Q80TR4 STRING:Q80TR4
PhosphoSite:Q80TR4 PRIDE:Q80TR4 Ensembl:ENSMUST00000025993
GeneID:20562 KEGG:mmu:20562 UCSC:uc008hmf.2 InParanoid:Q80TR4
OMA:KCVHGKC NextBio:298853 Bgee:Q80TR4 CleanEx:MM_SLIT1
Genevestigator:Q80TR4 GermOnline:ENSMUSG00000025020 Uniprot:Q80TR4
Length = 1531
Score = 167 (63.8 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 85/343 (24%), Positives = 141/343 (41%)
Query: 67 DLP-HTLRCTANKSDLYAISES-LRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLV 124
++P +T R N +++ I ++ GL+ + L++ + V G F + L L
Sbjct: 58 NIPRNTERLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVE--RGAFDDMKELERLR 115
Query: 125 ISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLE 184
++ +L+ + + F + L L L N L VP A A +L L L N++ +E
Sbjct: 116 LNRNQLQVLPELLFQN-NQALSRLDLSENFLQAVPRKAFRG-ATDLKNLQLDKNRISCIE 173
Query: 185 NTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSV-VAAL-QGLRSV 242
+F+ L L L L+ N + T+ + LR RL N L +A L Q LR
Sbjct: 174 EGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQR 233
Query: 243 TDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLT--------SL 294
+ L +GP L L V + +FS +G AG T
Sbjct: 234 PTIGL-FTQCSGPAS------LRGLNVAEVQKGEFSCSGQGEAAGAPACTLSSGSCPAMC 286
Query: 295 SCHHNQIDVLEDHSFRAL-----STLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFL 349
SC +D A+ T++ + L N I ++ + + L +DLS+N +
Sbjct: 287 SCSSGIVDC-RGKGLTAIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQI 345
Query: 350 RALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELI 392
+ D L+SL L L N I+ P ++ G T+ L L+
Sbjct: 346 AEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLL 388
Score = 153 (58.9 bits), Expect = 5.5e-14, Sum P(3) = 5.5e-14
Identities = 43/137 (31%), Positives = 70/137 (51%)
Query: 141 LSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLS 200
L + + L N + +P A +P L R+DLS+NQ+ ++ +F+GL SLN L L
Sbjct: 307 LPETMTEIRLELNGIKSIPPGAFSPYR-KLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLY 365
Query: 201 YNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPST 260
NK+ L + L TL++L L N++ A Q L++++ L L N + L T
Sbjct: 366 GNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQS-LAKGT 424
Query: 261 VPRLSSLKVLSIAHNQF 277
L +++ L +A N F
Sbjct: 425 FTSLRAIQTLHLAQNPF 441
Score = 145 (56.1 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 38/131 (29%), Positives = 72/131 (54%)
Query: 148 LGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTL 207
L L NN +S++ + L +L +++LS+N++ ++E+ +F+G +S++ L L+ N+L ++
Sbjct: 545 LRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGAASVSELHLTANQLESI 604
Query: 208 SQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSL 267
L LR L L+ NR++ + GLR+V L L N + + P L +L
Sbjct: 605 RSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHIT-TISPGAFDTLQAL 663
Query: 268 KVLSIAHNQFS 278
L++ N F+
Sbjct: 664 STLNLLANPFN 674
Score = 136 (52.9 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 37/144 (25%), Positives = 67/144 (46%)
Query: 240 RSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 299
+S T+L L++N ++ +LS LK +++++N+ S + G G ++ L N
Sbjct: 540 QSTTELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGAASVSELHLTAN 599
Query: 300 QIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITP 359
Q++ + FR L L L L +NRI + S L N+ L L N + ++
Sbjct: 600 QLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDT 659
Query: 360 LKSLQELRLDDNDISMEPECIYVG 383
L++L L L N + ++G
Sbjct: 660 LQALSTLNLLANPFNCNCHLSWLG 683
Score = 127 (49.8 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 42/152 (27%), Positives = 73/152 (48%)
Query: 220 VLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSS 279
++ +G LT ++ A L ++T++ L N + + P L+ + +++NQ +
Sbjct: 292 IVDCRGKGLT-AIPANLP--ETMTEIRLELNGIKS-IPPGAFSPYRKLRRIDLSNNQIAE 347
Query: 280 VRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNL 339
+ A GL L SL + N+I L F L TL L L N+I + + L NL
Sbjct: 348 IAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNL 407
Query: 340 TTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
+ L L N +++L + T L+++Q L L N
Sbjct: 408 SLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQN 439
Score = 124 (48.7 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 50/174 (28%), Positives = 79/174 (45%)
Query: 61 NDLCACDL--PHTLRCTANKSDLYAISESLRGLEPDERV--SLLDCTLSN--VTVLP--G 112
N C D+ PH RC A+ + SL+ + ER+ S + L+N +++L G
Sbjct: 504 NSECTSDVACPHKCRCEASVVEC----SSLKLSKIPERIPQSTTELRLNNNEISILEATG 559
Query: 113 KFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDR 172
F + L + +S+ ++ I DG F G +S + L L N L + + L L
Sbjct: 560 LFKKLSHLKKINLSNNKVSEIEDGTFEGAAS-VSELHLTANQLESIRSGMFRGL-DGLRT 617
Query: 173 LDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGN 226
L L +N++ + N SF GL ++ L L N + T+S L L L L N
Sbjct: 618 LMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLAN 671
Score = 118 (46.6 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 36/128 (28%), Positives = 59/128 (46%)
Query: 199 LSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGP 258
L N + ++ +P LR + L N++ A QGLRS+ L L N + L
Sbjct: 316 LELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITD-LPR 374
Query: 259 STVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHL 318
L +L++L + N+ + +R A L L+ LS + N+I L +F +L + L
Sbjct: 375 GVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTL 434
Query: 319 DLAHNRIV 326
LA N +
Sbjct: 435 HLAQNPFI 442
Score = 117 (46.2 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 32/103 (31%), Positives = 53/103 (51%)
Query: 221 LRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSV 280
L L GN+ T+ V L + + +DLS+N ++ L S+ +S L L +++N +
Sbjct: 766 LYLDGNQFTL-VPGQLSTFKYLQLVDLSNNKISS-LSNSSFTNMSQLTTLILSYNALQCI 823
Query: 281 RRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 323
A GL L LS H N + L++ F +++LSHL + N
Sbjct: 824 PPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAIGAN 866
Score = 115 (45.5 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 35/105 (33%), Positives = 57/105 (54%)
Query: 287 GLDK-LTSLSCHHNQIDVLEDHSFRALSTLSHL---DLAHNRIVAVSGASLAHLSNLTTL 342
G+ K +T L NQ ++ LST +L DL++N+I ++S +S ++S LTTL
Sbjct: 758 GIPKNVTELYLDGNQFTLVPGQ----LSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTL 813
Query: 343 DLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTM 387
LS+N L+ + L+SL+ L L ND+S E I+ ++
Sbjct: 814 ILSYNALQCIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSL 858
Score = 111 (44.1 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 88/348 (25%), Positives = 146/348 (41%)
Query: 60 KNDLCACDLPHTLRCTANKSDLYAISESLRGLEPD-ERVSLLDCTLSNVTVLPGK-FLEG 117
KND L+ N+ + A+ RG D + + L + + VLP F
Sbjct: 78 KNDFAGLKQLRVLQLMENQ--IGAVE---RGAFDDMKELERLRLNRNQLQVLPELLFQNN 132
Query: 118 VTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSH 177
L L +S L+ + AF G ++ L+ L L N +S + A L L+ L L++
Sbjct: 133 QALSRLDLSENFLQAVPRKAFRG-ATDLKNLQLDKNRISCIEEGAFRALR-GLEVLTLNN 190
Query: 178 NQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDC-LAPLVT-LRVLRLQGNRLTVSVVAA 235
N + + +SF + L L N L DC LA L LR G S A+
Sbjct: 191 NNITTIPVSSFNHMPKLRTFRLHSNHLFC---DCHLAWLSQWLRQRPTIGLFTQCSGPAS 247
Query: 236 LQGLRSVTDLDLSHNLLAGPLGPSTVPR--LSSLKVLSIAHNQFSSVR-RG----AL-AG 287
L+GL +V ++ +G + P LSS ++ V RG A+ A
Sbjct: 248 LRGL-NVAEVQKGEFSCSGQGEAAGAPACTLSSGSCPAMCSCSSGIVDCRGKGLTAIPAN 306
Query: 288 L-DKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSH 346
L + +T + N I + +F L +DL++N+I ++ + L +L +L L
Sbjct: 307 LPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYG 366
Query: 347 NFLRALTQDLITPLKSLQELRLDDNDIS-MEPECIYVGFNTMDLELIY 393
N + L + + L +LQ L L+ N I+ + P+ + + L +Y
Sbjct: 367 NKITDLPRGVFGGLYTLQLLLLNANKINCIRPDA-FQDLQNLSLLSLY 413
Score = 102 (41.0 bits), Expect = 5.5e-14, Sum P(3) = 5.5e-14
Identities = 29/115 (25%), Positives = 56/115 (48%)
Query: 292 TSLSCHHNQIDVLEDHS-FRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLR 350
T L ++N+I +LE F+ LS L ++L++N++ + + ++++ L L+ N L
Sbjct: 543 TELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGAASVSELHLTANQLE 602
Query: 351 ALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELIYSGVWRHSTLLIP 405
++ + L L+ L L +N IS + G + L +Y H T + P
Sbjct: 603 SIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDN---HITTISP 654
Score = 94 (38.1 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 30/116 (25%), Positives = 55/116 (47%)
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 317
P +P+ ++ L + NQF+ V G L+ L + +N+I L + SF +S L+
Sbjct: 756 PKGIPK--NVTELYLDGNQFTLVP-GQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTT 812
Query: 318 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 373
L L++N + + + L +L L L N + L + + + SL L + N +
Sbjct: 813 LILSYNALQCIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAIGANPL 868
Score = 79 (32.9 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 19/66 (28%), Positives = 36/66 (54%)
Query: 628 NNSDSRYVKLQATTIL-LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLED 686
N S+++ +++ T +S+ L + NQ S+R G GLD L +L +N+I + +
Sbjct: 571 NLSNNKVSEIEDGTFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHN 630
Query: 687 HSFSNV 692
SF+ +
Sbjct: 631 DSFTGL 636
Score = 72 (30.4 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 19/79 (24%), Positives = 39/79 (49%)
Query: 618 VAQQEDDINRNNSDSRYVKLQATTIL--LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLS 675
+ Q ++ NN++ L+AT + LS LK +++++N+ S + G G ++ L
Sbjct: 538 IPQSTTELRLNNNEISI--LEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGAASVSELH 595
Query: 676 CHHNQIDVLEDHSFSNVIG 694
NQ++ + F + G
Sbjct: 596 LTANQLESIRSGMFRGLDG 614
Score = 65 (27.9 bits), Expect = 5.5e-14, Sum P(3) = 5.5e-14
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
+S L L +++N + A GL L LS H N + L++ F++V
Sbjct: 807 MSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADV 855
Score = 63 (27.2 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 20/75 (26%), Positives = 34/75 (45%)
Query: 315 LSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 374
++ L L N+ V G L+ L +DLS+N + +L+ T + L L L N +
Sbjct: 763 VTELYLDGNQFTLVPG-QLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQ 821
Query: 375 MEPECIYVGFNTMDL 389
P + G ++ L
Sbjct: 822 CIPPLAFQGLRSLRL 836
Score = 57 (25.1 bits), Expect = 5.6e-09, Sum P(2) = 5.6e-09
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L +L++L + N+ + +R A L L+ LS + N+I L +F+++
Sbjct: 380 LYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSL 428
Score = 54 (24.1 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L SL L + N+ + + RG GL L L + N+I+ + +F ++
Sbjct: 356 LRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDL 404
Score = 46 (21.3 bits), Expect = 4.7e-12, Sum P(3) = 4.7e-12
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 655 NQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
NQF+ V G L+ L + +N+I L + SF+N+
Sbjct: 771 NQFTLVP-GQLSTFKYLQLVDLSNNKISSLSNSSFTNM 807
>RGD|1308170 [details] [associations]
symbol:Cd180 "CD180 molecule" species:10116 "Rattus norvegicus"
[GO:0002322 "B cell proliferation involved in immune response"
evidence=ISO] [GO:0031666 "positive regulation of
lipopolysaccharide-mediated signaling pathway" evidence=ISO]
[GO:0071222 "cellular response to lipopolysaccharide" evidence=ISO]
RGD:1308170 InterPro:IPR000483 SMART:SM00082 CTD:4064 KO:K06555
OrthoDB:EOG4W3SMG GeneTree:ENSGT00700000104185 OMA:TEAFKEC
EMBL:CH473955 IPI:IPI00360317 RefSeq:NP_001099875.1
UniGene:Rn.148663 Ensembl:ENSRNOT00000013768 GeneID:294706
KEGG:rno:294706 UCSC:RGD:1308170 NextBio:638441 Uniprot:D3ZIP2
Length = 662
Score = 214 (80.4 bits), Expect = 5.6e-14, P = 5.6e-14
Identities = 77/288 (26%), Positives = 133/288 (46%)
Query: 100 LDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVP 159
LD T +++T LP + L LV+S+ + +N+ + S L L + N +
Sbjct: 304 LDLTATHLTELPSGIVGLSKLKKLVLSANKFENLCQISASNFPS-LTHLYIKGNTKRLEL 362
Query: 160 TSALAPLAPNLDRLDLSHNQLYKLE--NTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVT 217
S +L LDLSH+ + + N + LS L L+LSYN+ + L +
Sbjct: 363 GSGCLETLEHLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLGLRTEAFKECPQ 422
Query: 218 LRVLRLQGNRLTVS-VVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQ 276
L +L L RL V + Q L + L+LSH LL G + L +L+ L++ N+
Sbjct: 423 LELLDLAFTRLHVKDAQSPFQNLHLLKVLNLSHCLL-GSSNQHLLDGLPALRHLNLQGNR 481
Query: 277 F--SSVRR-GALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASL 333
F ++++ L L L L + ++ +F L ++H+DL+HNR+ + S +L
Sbjct: 482 FPNGNIQKTNPLQALGSLEILILSFCDLSSIDHQAFINLKIMNHVDLSHNRLTSSSIEAL 541
Query: 334 AHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIY 381
+HL + L+L+ N + + L+ L + + L N + IY
Sbjct: 542 SHLKGIY-LNLASNRISIIPPSLLPVLSQQRTINLRQNPLDCTCSNIY 588
Score = 152 (58.6 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 55/206 (26%), Positives = 91/206 (44%)
Query: 169 NLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRL 228
+++R++L + + + + +F S L LDL+ L L + L L+ L L N+
Sbjct: 276 SVERINLQKHHFFNITSNTFYCFSGLQELDLTATHLTELPSGIVG-LSKLKKLVLSANKF 334
Query: 229 TVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQF--SSVRRGALA 286
+ S+T L + N LG + L L+ L ++H+ S L
Sbjct: 335 ENLCQISASNFPSLTHLYIKGNTKRLELGSGCLETLEHLRELDLSHDDIETSDCCNLQLR 394
Query: 287 GLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI-VAVSGASLAHLSNLTTLDLS 345
L L SL+ +N+ L +F+ L LDLA R+ V + + +L L L+LS
Sbjct: 395 NLSHLQSLNLSYNEPLGLRTEAFKECPQLELLDLAFTRLHVKDAQSPFQNLHLLKVLNLS 454
Query: 346 HNFLRALTQDLITPLKSLQELRLDDN 371
H L + Q L+ L +L+ L L N
Sbjct: 455 HCLLGSSNQHLLDGLPALRHLNLQGN 480
Score = 47 (21.6 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 15/60 (25%), Positives = 28/60 (46%)
Query: 637 LQATTIL--LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNVIG 694
+Q T L L SL++L ++ SS+ A L + + HN++ + S++ G
Sbjct: 487 IQKTNPLQALGSLEILILSFCDLSSIDHQAFINLKIMNHVDLSHNRLTSSSIEALSHLKG 546
>UNIPROTKB|F1MBT2 [details] [associations]
symbol:LINGO1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048715 "negative regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0043491 "protein kinase B
signaling cascade" evidence=IEA] [GO:0031175 "neuron projection
development" evidence=IEA] [GO:0021954 "central nervous system
neuron development" evidence=IEA] [GO:0005154 "epidermal growth
factor receptor binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0043491
GO:GO:0031175 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0021954 GO:GO:0048715
GeneTree:ENSGT00690000101682 OMA:RIRDRKP EMBL:DAAA02052480
IPI:IPI01003440 Ensembl:ENSBTAT00000031490 Uniprot:F1MBT2
Length = 614
Score = 204 (76.9 bits), Expect = 5.8e-14, Sum P(2) = 5.8e-14
Identities = 75/274 (27%), Positives = 123/274 (44%)
Query: 116 EGVTLHGLVISSGE--LKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRL 173
EG+ ++ G+ +K ++ F L+ L L N++S V A L NL L
Sbjct: 61 EGIPTETRLLDLGKNRIKTLNQDEFASFPH-LEELELNENIVSAVEPGAFNNLF-NLRTL 118
Query: 174 DLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVV 233
L N+L + F GLS+L LD+S NK++ L L L+ L + N L
Sbjct: 119 GLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISH 178
Query: 234 AALQGLRSVTDLDLSH-NLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLT 292
A GL S+ L L NL + P + L L VL + H +++R + L +L
Sbjct: 179 RAFSGLNSLEQLTLEKCNLTSIPT--EALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLK 236
Query: 293 SLSCHH-NQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRA 351
L H +D + + L+ L+ L + H + AV ++ HL L L+LS+N +
Sbjct: 237 VLEISHWPYLDTMTPNCLYGLN-LTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIST 295
Query: 352 LTQDLITPLKSLQELRLDDNDISMEPECIYVGFN 385
+ ++ L LQE++L +++ + G N
Sbjct: 296 IEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLN 329
Score = 203 (76.5 bits), Expect = 7.8e-13, P = 7.8e-13
Identities = 76/276 (27%), Positives = 127/276 (46%)
Query: 109 VLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAP 168
V PG F L L + S LK I G F GLS+ L L + N + ++ L
Sbjct: 104 VEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSN-LTKLDISENKIVILLDYMFQDLY- 161
Query: 169 NLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRL 228
NL L++ N L + + +F GL+SL L L L ++ + L+ L L VLRL+ L
Sbjct: 162 NLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLR--HL 219
Query: 229 TVSVVA--ALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALA 286
++ + + + L + L++SH + P+ + L+ L LSI H ++V A+
Sbjct: 220 NINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLN-LTSLSITHCNLTAVPYLAVR 278
Query: 287 GLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSH 346
L L L+ +N I +E L L + L ++ V + L+ L L++S
Sbjct: 279 HLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSG 338
Query: 347 NFLRALTQDLITPLKSLQELRLDDNDISMEPECIYV 382
N L L + + +L+ L LD N ++ + ++V
Sbjct: 339 NQLTTLEESAFHSVGNLETLILDSNPLACDCRLLWV 374
Score = 181 (68.8 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 62/254 (24%), Positives = 117/254 (46%)
Query: 140 GLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDL 199
G+ + + L L N + + A P+L+ L+L+ N + +E +F L +L L L
Sbjct: 62 GIPTETRLLDLGKNRIKTLNQDEFASF-PHLEELELNENIVSAVEPGAFNNLFNLRTLGL 120
Query: 200 SYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPS 259
N+L + L L L + N++ + + Q L ++ L++ N L +
Sbjct: 121 RSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVY-ISHR 179
Query: 260 TVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 319
L+SL+ L++ +S+ AL+ L L L H I+ + D+SF+ L L L+
Sbjct: 180 AFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLE 239
Query: 320 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS-MEPE 378
++H + + + NLT+L ++H L A+ + L L+ L L N IS +E
Sbjct: 240 ISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGS 299
Query: 379 CIYVGFNTMDLELI 392
++ +++L+
Sbjct: 300 MLHELLRLQEIQLV 313
Score = 174 (66.3 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 68/226 (30%), Positives = 110/226 (48%)
Query: 100 LDCTLSNVTVLPGKFLEGV-TLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVV 158
LD + + + +L + + L L + +L IS AF GL+S L+ L L L+ +
Sbjct: 142 LDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNS-LEQLTLEKCNLTSI 200
Query: 159 PTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSY-NKLMTLSQDCLAPLVT 217
PT AL+ L L L L H + + + SFK L L L++S+ L T++ +CL L
Sbjct: 201 PTEALSHLH-GLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGL-N 258
Query: 218 LRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQF 277
L L + LT A++ L + L+LS+N ++ G S + L L+ + + Q
Sbjct: 259 LTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEG-SMLHELLRLQEIQLVGGQL 317
Query: 278 SSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 323
+ V A GL+ L L+ NQ+ LE+ +F ++ L L L N
Sbjct: 318 AVVEPYAFRGLNYLRVLNVSGNQLTTLEESAFHSVGNLETLILDSN 363
Score = 138 (53.6 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 62/214 (28%), Positives = 101/214 (47%)
Query: 67 DLPHTLRCTANKSDLYAISE-SLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVI 125
DL + +DL IS + GL E+++L C N+T +P + L LHGL++
Sbjct: 159 DLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKC---NLTSIPTEALSH--LHGLIV 213
Query: 126 SSGELKNIS---DGAFIGLSSPLQALGLPN-NLLSVVPTSALAPLAPNLDRLDLSHNQLY 181
NI+ D +F L L+ L + + L + + L L NL L ++H L
Sbjct: 214 LRLRHLNINAIRDYSFKRLYR-LKVLEISHWPYLDTMTPNCLYGL--NLTSLSITHCNLT 270
Query: 182 KLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRS 241
+ + + L L FL+LSYN + T+ L L+ L+ ++L G +L V A +GL
Sbjct: 271 AVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNY 330
Query: 242 VTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHN 275
+ L++S N L L S + +L+ L + N
Sbjct: 331 LRVLNVSGNQLT-TLEESAFHSVGNLETLILDSN 363
Score = 133 (51.9 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 34/131 (25%), Positives = 60/131 (45%)
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 317
P +P + ++L + N+ ++ + A L L + N + +E +F L L
Sbjct: 60 PEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRT 117
Query: 318 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEP 377
L L NR+ + LSNLT LD+S N + L + L +L+ L + DND+
Sbjct: 118 LGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYIS 177
Query: 378 ECIYVGFNTMD 388
+ G N+++
Sbjct: 178 HRAFSGLNSLE 188
Score = 129 (50.5 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 41/146 (28%), Positives = 70/146 (47%)
Query: 233 VAALQGLRSVTDL-DLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKL 291
VA +G+ + T L DL N + L L+ L + N S+V GA L L
Sbjct: 57 VAVPEGIPTETRLLDLGKNRIK-TLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNL 115
Query: 292 TSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRA 351
+L N++ ++ F LS L+ LD++ N+IV + L NL +L++ N L
Sbjct: 116 RTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVY 175
Query: 352 LTQDLITPLKSLQELRLDDNDISMEP 377
++ + L SL++L L+ +++ P
Sbjct: 176 ISHRAFSGLNSLEQLTLEKCNLTSIP 201
Score = 56 (24.8 bits), Expect = 5.8e-14, Sum P(2) = 5.8e-14
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L+ + + Q + V A GL+ L L+ NQ+ LE+ +F +V
Sbjct: 304 LLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESAFHSV 352
Score = 46 (21.3 bits), Expect = 6.3e-13, Sum P(2) = 6.3e-13
Identities = 10/38 (26%), Positives = 21/38 (55%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
L+ L+VL+++ NQ +++ A + L +L N +
Sbjct: 328 LNYLRVLNVSGNQLTTLEESAFHSVGNLETLILDSNPL 365
Score = 40 (19.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 646 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLE 685
+L LSI H ++V A+ L L L+ +N I +E
Sbjct: 258 NLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIE 297
>UNIPROTKB|F1SJ87 [details] [associations]
symbol:LINGO1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048715 "negative regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0043491 "protein kinase B
signaling cascade" evidence=IEA] [GO:0031175 "neuron projection
development" evidence=IEA] [GO:0021954 "central nervous system
neuron development" evidence=IEA] [GO:0005154 "epidermal growth
factor receptor binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0043491
GO:GO:0031175 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0021954 GO:GO:0048715
GeneTree:ENSGT00690000101682 OMA:RIRDRKP EMBL:CT954219
Ensembl:ENSSSCT00000002097 Uniprot:F1SJ87
Length = 620
Score = 204 (76.9 bits), Expect = 6.0e-14, Sum P(2) = 6.0e-14
Identities = 75/274 (27%), Positives = 123/274 (44%)
Query: 116 EGVTLHGLVISSGE--LKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRL 173
EG+ ++ G+ +K ++ F L+ L L N++S V A L NL L
Sbjct: 67 EGIPTETRLLDLGKNRIKTLNQDEFASFPH-LEELELNENIVSAVEPGAFNNLF-NLRTL 124
Query: 174 DLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVV 233
L N+L + F GLS+L LD+S NK++ L L L+ L + N L
Sbjct: 125 GLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISH 184
Query: 234 AALQGLRSVTDLDLSH-NLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLT 292
A GL S+ L L NL + P + L L VL + H +++R + L +L
Sbjct: 185 RAFSGLNSLEQLTLEKCNLTSIPT--EALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLK 242
Query: 293 SLSCHH-NQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRA 351
L H +D + + L+ L+ L + H + AV ++ HL L L+LS+N +
Sbjct: 243 VLEISHWPYLDTMTPNCLYGLN-LTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIST 301
Query: 352 LTQDLITPLKSLQELRLDDNDISMEPECIYVGFN 385
+ ++ L LQE++L +++ + G N
Sbjct: 302 IEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLN 335
Score = 203 (76.5 bits), Expect = 8.0e-13, P = 8.0e-13
Identities = 76/276 (27%), Positives = 127/276 (46%)
Query: 109 VLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAP 168
V PG F L L + S LK I G F GLS+ L L + N + ++ L
Sbjct: 110 VEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSN-LTKLDISENKIVILLDYMFQDLY- 167
Query: 169 NLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRL 228
NL L++ N L + + +F GL+SL L L L ++ + L+ L L VLRL+ L
Sbjct: 168 NLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLR--HL 225
Query: 229 TVSVVA--ALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALA 286
++ + + + L + L++SH + P+ + L+ L LSI H ++V A+
Sbjct: 226 NINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLN-LTSLSITHCNLTAVPYLAVR 284
Query: 287 GLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSH 346
L L L+ +N I +E L L + L ++ V + L+ L L++S
Sbjct: 285 HLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSG 344
Query: 347 NFLRALTQDLITPLKSLQELRLDDNDISMEPECIYV 382
N L L + + +L+ L LD N ++ + ++V
Sbjct: 345 NQLTTLEESAFHSVGNLETLILDSNPLACDCRLLWV 380
Score = 181 (68.8 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 62/254 (24%), Positives = 117/254 (46%)
Query: 140 GLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDL 199
G+ + + L L N + + A P+L+ L+L+ N + +E +F L +L L L
Sbjct: 68 GIPTETRLLDLGKNRIKTLNQDEFASF-PHLEELELNENIVSAVEPGAFNNLFNLRTLGL 126
Query: 200 SYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPS 259
N+L + L L L + N++ + + Q L ++ L++ N L +
Sbjct: 127 RSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVY-ISHR 185
Query: 260 TVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 319
L+SL+ L++ +S+ AL+ L L L H I+ + D+SF+ L L L+
Sbjct: 186 AFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLE 245
Query: 320 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS-MEPE 378
++H + + + NLT+L ++H L A+ + L L+ L L N IS +E
Sbjct: 246 ISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGS 305
Query: 379 CIYVGFNTMDLELI 392
++ +++L+
Sbjct: 306 MLHELLRLQEIQLV 319
Score = 174 (66.3 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 68/226 (30%), Positives = 110/226 (48%)
Query: 100 LDCTLSNVTVLPGKFLEGV-TLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVV 158
LD + + + +L + + L L + +L IS AF GL+S L+ L L L+ +
Sbjct: 148 LDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNS-LEQLTLEKCNLTSI 206
Query: 159 PTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSY-NKLMTLSQDCLAPLVT 217
PT AL+ L L L L H + + + SFK L L L++S+ L T++ +CL L
Sbjct: 207 PTEALSHLH-GLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGL-N 264
Query: 218 LRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQF 277
L L + LT A++ L + L+LS+N ++ G S + L L+ + + Q
Sbjct: 265 LTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEG-SMLHELLRLQEIQLVGGQL 323
Query: 278 SSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 323
+ V A GL+ L L+ NQ+ LE+ +F ++ L L L N
Sbjct: 324 AVVEPYAFRGLNYLRVLNVSGNQLTTLEESAFHSVGNLETLILDSN 369
Score = 138 (53.6 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 62/214 (28%), Positives = 101/214 (47%)
Query: 67 DLPHTLRCTANKSDLYAISE-SLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVI 125
DL + +DL IS + GL E+++L C N+T +P + L LHGL++
Sbjct: 165 DLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKC---NLTSIPTEALSH--LHGLIV 219
Query: 126 SSGELKNIS---DGAFIGLSSPLQALGLPN-NLLSVVPTSALAPLAPNLDRLDLSHNQLY 181
NI+ D +F L L+ L + + L + + L L NL L ++H L
Sbjct: 220 LRLRHLNINAIRDYSFKRLYR-LKVLEISHWPYLDTMTPNCLYGL--NLTSLSITHCNLT 276
Query: 182 KLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRS 241
+ + + L L FL+LSYN + T+ L L+ L+ ++L G +L V A +GL
Sbjct: 277 AVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNY 336
Query: 242 VTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHN 275
+ L++S N L L S + +L+ L + N
Sbjct: 337 LRVLNVSGNQLT-TLEESAFHSVGNLETLILDSN 369
Score = 133 (51.9 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 34/131 (25%), Positives = 60/131 (45%)
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 317
P +P + ++L + N+ ++ + A L L + N + +E +F L L
Sbjct: 66 PEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRT 123
Query: 318 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEP 377
L L NR+ + LSNLT LD+S N + L + L +L+ L + DND+
Sbjct: 124 LGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYIS 183
Query: 378 ECIYVGFNTMD 388
+ G N+++
Sbjct: 184 HRAFSGLNSLE 194
Score = 129 (50.5 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 41/146 (28%), Positives = 70/146 (47%)
Query: 233 VAALQGLRSVTDL-DLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKL 291
VA +G+ + T L DL N + L L+ L + N S+V GA L L
Sbjct: 63 VAVPEGIPTETRLLDLGKNRIK-TLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNL 121
Query: 292 TSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRA 351
+L N++ ++ F LS L+ LD++ N+IV + L NL +L++ N L
Sbjct: 122 RTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVY 181
Query: 352 LTQDLITPLKSLQELRLDDNDISMEP 377
++ + L SL++L L+ +++ P
Sbjct: 182 ISHRAFSGLNSLEQLTLEKCNLTSIP 207
Score = 56 (24.8 bits), Expect = 6.0e-14, Sum P(2) = 6.0e-14
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L+ + + Q + V A GL+ L L+ NQ+ LE+ +F +V
Sbjct: 310 LLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESAFHSV 358
Score = 46 (21.3 bits), Expect = 6.6e-13, Sum P(2) = 6.6e-13
Identities = 10/38 (26%), Positives = 21/38 (55%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
L+ L+VL+++ NQ +++ A + L +L N +
Sbjct: 334 LNYLRVLNVSGNQLTTLEESAFHSVGNLETLILDSNPL 371
Score = 40 (19.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 646 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLE 685
+L LSI H ++V A+ L L L+ +N I +E
Sbjct: 264 NLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIE 303
>UNIPROTKB|F1NTY3 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0050770 "regulation of axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026878
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 OMA:WITPNGS PANTHER:PTHR24369:SF8
EMBL:AADN02033191 EMBL:AADN02033192 EMBL:AADN02033193
EMBL:AADN02033194 EMBL:AADN02033195 EMBL:AADN02033196
EMBL:AADN02033197 EMBL:AADN02033198 EMBL:AADN02033199
EMBL:AADN02033200 EMBL:AADN02033201 EMBL:AADN02033202
EMBL:AADN02033203 EMBL:AADN02033204 EMBL:AADN02033205
EMBL:AADN02033206 EMBL:AADN02033207 EMBL:AADN02033208
EMBL:AADN02033209 EMBL:AADN02033210 EMBL:AADN02033211
EMBL:AADN02033212 EMBL:AADN02033213 EMBL:AADN02033214
EMBL:AADN02033215 EMBL:AADN02033216 EMBL:AADN02033217
EMBL:AADN02033218 EMBL:AADN02033219 EMBL:AADN02033220
EMBL:AADN02033221 EMBL:AADN02033222 EMBL:AADN02033223
EMBL:AADN02033224 IPI:IPI00573827 Ensembl:ENSGALT00000012910
ArrayExpress:F1NTY3 Uniprot:F1NTY3
Length = 545
Score = 212 (79.7 bits), Expect = 6.4e-14, P = 6.4e-14
Identities = 67/241 (27%), Positives = 113/241 (46%)
Query: 131 KNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKG 190
KN+ D G+S+ + L L N + ++ ++ L +L+ L LS N + +E +F G
Sbjct: 33 KNLRDVPD-GISTNTRLLNLHENQIQIIKVNSFKHLR-HLEILQLSRNHIRTIEIGAFNG 90
Query: 191 LSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHN 250
L++LN L+L N+L T+ L L+ L L+ N + A + S+ LDL
Sbjct: 91 LANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGEL 150
Query: 251 LLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFR 310
+ LS+L+ L++A + L L KL L N + + SF+
Sbjct: 151 KRLSYISEGAFEGLSNLRYLNLAMCNLREIPN--LTPLVKLDELDLSGNHLTAIRPGSFQ 208
Query: 311 ALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDD 370
L L L + ++I + + +L +L ++L+HN L L DL TPL+ L+ + L
Sbjct: 209 GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLR-LERIHLHH 267
Query: 371 N 371
N
Sbjct: 268 N 268
Score = 183 (69.5 bits), Expect = 9.7e-11, P = 9.7e-11
Identities = 61/205 (29%), Positives = 101/205 (49%)
Query: 97 VSLLDCTLSNV-TVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLL 155
+ +L + +++ T+ G F L+ L + L I +GAF+ LS L+ L L NN +
Sbjct: 70 LEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSK-LKELWLRNNPI 128
Query: 156 SVVPTSALAPLAPNLDRLDLSH-NQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAP 214
+P+ A + P+L RLDL +L + +F+GLS+L +L+L+ L + L P
Sbjct: 129 ESIPSYAFNRI-PSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPN--LTP 185
Query: 215 LVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAH 274
LV L L L GN LT + QGL + L + + + + + L SL +++AH
Sbjct: 186 LVKLDELDLSGNHLTAIRPGSFQGLMHLQKLWMIQSQIQ-VIERNAFDNLQSLVEINLAH 244
Query: 275 NQFSSVRRGALAGLDKLTSLSCHHN 299
N + + L +L + HHN
Sbjct: 245 NNLTLLPHDLFTPL-RLERIHLHHN 268
Score = 176 (67.0 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 64/230 (27%), Positives = 105/230 (45%)
Query: 166 LAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQG 225
++ N L+L NQ+ ++ SFK L L L LS N + T+ L L L L
Sbjct: 42 ISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFD 101
Query: 226 NRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPS-TVPRLSSLKVLSIAH-NQFSSVRRG 283
NRLT A L + +L L +N + PS R+ SL+ L + + S + G
Sbjct: 102 NRLTTIPNGAFVYLSKLKELWLRNNPIESI--PSYAFNRIPSLRRLDLGELKRLSYISEG 159
Query: 284 ALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLD 343
A GL L L+ ++ E + L L LDL+ N + A+ S L +L L
Sbjct: 160 AFEGLSNLRYLNLA--MCNLREIPNLTPLVKLDELDLSGNHLTAIRPGSFQGLMHLQKLW 217
Query: 344 LSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELIY 393
+ + ++ + ++ L+SL E+ L N++++ P + F + LE I+
Sbjct: 218 MIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDL---FTPLRLERIH 264
Score = 117 (46.2 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 43/133 (32%), Positives = 60/133 (45%)
Query: 252 LAGPLGPSTVPRLSSLKVLSIAHNQFSSV---R---RGALAGLDKLTSL-SCHHNQIDVL 304
+A G T P + S NQFS V R R G+ T L + H NQI ++
Sbjct: 6 VAASSGAQTCPSVCSCS------NQFSKVICVRKNLRDVPDGISTNTRLLNLHENQIQII 59
Query: 305 EDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQ 364
+ +SF+ L L L L+ N I + + L+NL TL+L N L + L L+
Sbjct: 60 KVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLK 119
Query: 365 ELRLDDNDISMEP 377
EL L +N I P
Sbjct: 120 ELWLRNNPIESIP 132
Score = 106 (42.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 37/139 (26%), Positives = 62/139 (44%)
Query: 250 NLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 309
NL P G ST RL L++ NQ ++ + L L L N I +E +F
Sbjct: 34 NLRDVPDGISTNTRL-----LNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAF 88
Query: 310 RALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLD 369
L+ L+ L+L NR+ + + +LS L L L +N + ++ + SL+ L L
Sbjct: 89 NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG 148
Query: 370 D-NDISMEPECIYVGFNTM 387
+ +S E + G + +
Sbjct: 149 ELKRLSYISEGAFEGLSNL 167
Score = 68 (29.0 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 16/49 (32%), Positives = 27/49 (55%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L L ++ N +++R G+ GL L L +QI V+E ++F N+
Sbjct: 186 LVKLDELDLSGNHLTAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNL 234
Score = 50 (22.7 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 12/47 (25%), Positives = 21/47 (44%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFS 690
L L+ L + +Q + R A L L ++ HN + +L F+
Sbjct: 210 LMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFT 256
>MGI|MGI:1096866 [details] [associations]
symbol:Chad "chondroadherin" species:10090 "Mus musculus"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1096866 GO:GO:0005578
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0001502 CTD:1101 HOGENOM:HOG000013150 HOVERGEN:HBG005324
KO:K06248 OrthoDB:EOG4K9BCM OMA:CHCHGGD EMBL:U96626 EMBL:BC012672
IPI:IPI00116674 RefSeq:NP_031715.1 UniGene:Mm.440523
ProteinModelPortal:O55226 SMR:O55226 STRING:O55226 PRIDE:O55226
Ensembl:ENSMUST00000040418 GeneID:12643 KEGG:mmu:12643
InParanoid:O55226 NextBio:281844 Bgee:O55226 CleanEx:MM_CHAD
Genevestigator:O55226 GermOnline:ENSMUSG00000039084 Uniprot:O55226
Length = 358
Score = 207 (77.9 bits), Expect = 6.6e-14, P = 6.6e-14
Identities = 60/200 (30%), Positives = 99/200 (49%)
Query: 173 LDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSV 232
L LSHN + L +F L+ L +L L +NK+ L + L+PLV L +L+L N++
Sbjct: 103 LYLSHNDIRVLRAGAFDDLTELTYLYLDHNKVSELPRGLLSPLVNLFILQLNNNKIRELR 162
Query: 233 VAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLT 292
A QG + + L LS N L+ L P ++ + +L + NQ SS AL+ L +
Sbjct: 163 AGAFQGAKDLRWLYLSENALSS-LQPGSLDDVENLAKFHLDKNQLSSYPSAALSKLRVVE 221
Query: 293 SLSCHHNQIDVLEDHSFRALST-LSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRA 351
L HN + + D++F++ L L L + + S A+ + ++ L + L +N L
Sbjct: 222 ELKLSHNPLKSIPDNAFQSFGRYLETLWLDNTNLEKFSDAAFSGVTTLKHVHLDNNRLNQ 281
Query: 352 LTQDLITPLKSLQELRLDDN 371
L P +L+ L L +N
Sbjct: 282 LPSSF--PFDNLETLTLTNN 299
Score = 167 (63.8 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 66/226 (29%), Positives = 103/226 (45%)
Query: 99 LLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVV 158
L C + V G F L L +S +++ + GAF L+ L L L +N +S +
Sbjct: 81 LQHCNIREVAA--GAFRGLKQLIYLYLSHNDIRVLRAGAFDDLTE-LTYLYLDHNKVSEL 137
Query: 159 PTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTL 218
P L+PL NL L L++N++ +L +F+G L +L LS N L +L L + L
Sbjct: 138 PRGLLSPLV-NLFILQLNNNKIRELRAGAFQGAKDLRWLYLSENALSSLQPGSLDDVENL 196
Query: 219 RVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSS-LKVLSIAHNQF 277
L N+L+ AAL LR V +L LSHN L + + L+ L + +
Sbjct: 197 AKFHLDKNQLSSYPSAALSKLRVVEELKLSHNPLKS-IPDNAFQSFGRYLETLWLDNTNL 255
Query: 278 SSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 323
A +G+ L + +N+++ L SF L L L +N
Sbjct: 256 EKFSDAAFSGVTTLKHVHLDNNRLNQLPS-SF-PFDNLETLTLTNN 299
Score = 166 (63.5 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 58/221 (26%), Positives = 97/221 (43%)
Query: 174 DLSHNQLYKLENTSFKGLS-SLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSV 232
DL H K+ +S + L+L N L+ + + L L LQ +
Sbjct: 31 DLQHVICDKVGLQKIPKVSETTKLLNLQRNNFPVLAANSFRTMPNLVSLHLQHCNIREVA 90
Query: 233 VAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLT 292
A +GL+ + L LSHN + L L+ L L + HN+ S + RG L+ L L
Sbjct: 91 AGAFRGLKQLIYLYLSHNDIR-VLRAGAFDDLTELTYLYLDHNKVSELPRGLLSPLVNLF 149
Query: 293 SLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRAL 352
L ++N+I L +F+ L L L+ N + ++ SL + NL L N L +
Sbjct: 150 ILQLNNNKIRELRAGAFQGAKDLRWLYLSENALSSLQPGSLDDVENLAKFHLDKNQLSSY 209
Query: 353 TQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELIY 393
++ L+ ++EL+L N + P+ + F LE ++
Sbjct: 210 PSAALSKLRVVEELKLSHNPLKSIPDNAFQSFGRY-LETLW 249
Score = 158 (60.7 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 54/216 (25%), Positives = 95/216 (43%)
Query: 173 LDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSV 232
L+L N L SF+ + +L L L + + ++ L L L L N + V
Sbjct: 55 LNLQRNNFPVLAANSFRTMPNLVSLHLQHCNIREVAAGAFRGLKQLIYLYLSHNDIRVLR 114
Query: 233 VAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLT 292
A L +T L L HN ++ L + L +L +L + +N+ +R GA G L
Sbjct: 115 AGAFDDLTELTYLYLDHNKVS-ELPRGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDLR 173
Query: 293 SLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRAL 352
L N + L+ S + L+ L N++ + A+L+ L + L LSHN L+++
Sbjct: 174 WLYLSENALSSLQPGSLDDVENLAKFHLDKNQLSSYPSAALSKLRVVEELKLSHNPLKSI 233
Query: 353 TQDLITPL-KSLQELRLDDNDISMEPECIYVGFNTM 387
+ + L+ L LD+ ++ + + G T+
Sbjct: 234 PDNAFQSFGRYLETLWLDNTNLEKFSDAAFSGVTTL 269
>RGD|69307 [details] [associations]
symbol:Slit1 "slit homolog 1 (Drosophila)" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005615
"extracellular space" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0007409 "axonogenesis" evidence=ISO]
[GO:0007411 "axon guidance" evidence=ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0008045 "motor neuron axon guidance"
evidence=IEA;ISO] [GO:0021510 "spinal cord development"
evidence=IEP] [GO:0021772 "olfactory bulb development" evidence=ISO]
[GO:0022028 "tangential migration from the subventricular zone to
the olfactory bulb" evidence=IEA;ISO] [GO:0022029 "telencephalon
cell migration" evidence=ISO] [GO:0031290 "retinal ganglion cell
axon guidance" evidence=IEA;ISO] [GO:0033563 "dorsal/ventral axon
guidance" evidence=IEA;ISO] [GO:0040023 "establishment of nucleus
localization" evidence=IEA;ISO] [GO:0043395 "heparan sulfate
proteoglycan binding" evidence=IDA] [GO:0048495 "Roundabout binding"
evidence=IEA;ISO] [GO:0048812 "neuron projection morphogenesis"
evidence=ISO] [GO:0048843 "negative regulation of axon extension
involved in axon guidance" evidence=IDA] [GO:0048846 "axon extension
involved in axon guidance" evidence=IEA;ISO] [GO:0050919 "negative
chemotaxis" evidence=IEA;ISO] [GO:0051964 "negative regulation of
synapse assembly" evidence=ISS] [GO:0021834 "chemorepulsion involved
in embryonic olfactory bulb interneuron precursor migration"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:69307 GO:GO:0005737 GO:GO:0005615
GO:GO:0007420 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186
GO:GO:0043395 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 GO:GO:0051964
Pfam:PF01463 GO:GO:0022028 GO:GO:0050919 GO:GO:0048843 CTD:6585
HOGENOM:HOG000116120 HOVERGEN:HBG057959 KO:K06838 OrthoDB:EOG4VDPXM
EMBL:AB011530 EMBL:AF133730 EMBL:AB073213 EMBL:AB073214
EMBL:AB073215 EMBL:AB017170 IPI:IPI00389760 IPI:IPI00409983
IPI:IPI00409984 IPI:IPI00409985 PIR:T42218 RefSeq:NP_075242.1
UniGene:Rn.30002 ProteinModelPortal:O88279 SMR:O88279 STRING:O88279
PRIDE:O88279 GeneID:65047 KEGG:rno:65047 UCSC:RGD:69307
InParanoid:O88279 NextBio:613884 ArrayExpress:O88279
Genevestigator:O88279 GermOnline:ENSRNOG00000026065 Uniprot:O88279
Length = 1531
Score = 166 (63.5 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 85/343 (24%), Positives = 143/343 (41%)
Query: 67 DLP-HTLRCTANKSDLYAISES-LRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLV 124
++P +T R N +++ I ++ GL+ + L++ + V G F + L L
Sbjct: 58 NIPRNTERLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVE--RGAFDDMKELERLR 115
Query: 125 ISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLE 184
++ +L+ + + F + L L L N L VP A A +L L L NQ+ +E
Sbjct: 116 LNRNQLQVLPELLFQN-NQALSRLDLSENSLQAVPRKAFRG-ATDLKNLQLDKNQISCIE 173
Query: 185 NTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSV-VAAL-QGLRSV 242
+F+ L L L L+ N + T+ + LR RL N L +A L Q LR
Sbjct: 174 EGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQR 233
Query: 243 TDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLT--------SL 294
+ L +GP L L V + ++FS +G A + T
Sbjct: 234 PTIGL-FTQCSGPAS------LRGLNVAEVQKSEFSCSGQGEAAQVPACTLSSGSCPAMC 286
Query: 295 SCHHNQIDVLEDHSFRAL-----STLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFL 349
SC + +D A+ T++ + L N I ++ + + L +DLS+N +
Sbjct: 287 SCSNGIVDC-RGKGLTAIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQI 345
Query: 350 RALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELI 392
+ D L+SL L L N I+ P ++ G T+ L L+
Sbjct: 346 AEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLL 388
Score = 153 (58.9 bits), Expect = 7.0e-14, Sum P(3) = 7.0e-14
Identities = 43/137 (31%), Positives = 70/137 (51%)
Query: 141 LSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLS 200
L + + L N + +P A +P L R+DLS+NQ+ ++ +F+GL SLN L L
Sbjct: 307 LPETMTEIRLELNGIKSIPPGAFSPYR-KLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLY 365
Query: 201 YNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPST 260
NK+ L + L TL++L L N++ A Q L++++ L L N + L T
Sbjct: 366 GNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQS-LAKGT 424
Query: 261 VPRLSSLKVLSIAHNQF 277
L +++ L +A N F
Sbjct: 425 FTSLRAIQTLHLAQNPF 441
Score = 144 (55.7 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 38/131 (29%), Positives = 72/131 (54%)
Query: 148 LGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTL 207
L L NN +S++ + L +L +++LS+N++ ++E+ +F+G +S++ L L+ N+L ++
Sbjct: 545 LRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLESV 604
Query: 208 SQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSL 267
L LR L L+ NR++ + GLR+V L L N + + P L +L
Sbjct: 605 RSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHIT-TISPGAFDTLQAL 663
Query: 268 KVLSIAHNQFS 278
L++ N F+
Sbjct: 664 STLNLLANPFN 674
Score = 139 (54.0 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 37/144 (25%), Positives = 68/144 (47%)
Query: 240 RSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 299
+S T+L L++N ++ +LS LK +++++N+ S + G G ++ L N
Sbjct: 540 QSTTELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTAN 599
Query: 300 QIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITP 359
Q++ + FR L L L L +NRI + S L N+ L L N + ++
Sbjct: 600 QLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDT 659
Query: 360 LKSLQELRLDDNDISMEPECIYVG 383
L++L L L N + + ++G
Sbjct: 660 LQALSTLNLLANPFNCNCQLAWLG 683
Score = 128 (50.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 87/348 (25%), Positives = 144/348 (41%)
Query: 60 KNDLCACDLPHTLRCTANKSDLYAISESLRGLEPD-ERVSLLDCTLSNVTVLPGK-FLEG 117
KND L+ N+ + A+ RG D + + L + + VLP F
Sbjct: 78 KNDFAGLKQLRVLQLMENQ--IGAVE---RGAFDDMKELERLRLNRNQLQVLPELLFQNN 132
Query: 118 VTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSH 177
L L +S L+ + AF G ++ L+ L L N +S + A L L+ L L++
Sbjct: 133 QALSRLDLSENSLQAVPRKAFRG-ATDLKNLQLDKNQISCIEEGAFRALR-GLEVLTLNN 190
Query: 178 NQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDC-LAPLVT-LRVLRLQGNRLTVSVVAA 235
N + + +SF + L L N L DC LA L LR G S A+
Sbjct: 191 NNITTIPVSSFNHMPKLRTFRLHSNHLFC---DCHLAWLSQWLRQRPTIGLFTQCSGPAS 247
Query: 236 LQGLRSVTDLDLSHNLLAGPLGPSTVPR--LSS--LKVLSIAHNQFSSVRRGALAGL--- 288
L+GL +V ++ S +G + VP LSS + N R L +
Sbjct: 248 LRGL-NVAEVQKSEFSCSGQGEAAQVPACTLSSGSCPAMCSCSNGIVDCRGKGLTAIPAN 306
Query: 289 --DKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSH 346
+ +T + N I + +F L +DL++N+I ++ + L +L +L L
Sbjct: 307 LPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYG 366
Query: 347 NFLRALTQDLITPLKSLQELRLDDNDIS-MEPECIYVGFNTMDLELIY 393
N + L + + L +LQ L L+ N I+ + P+ + + L +Y
Sbjct: 367 NKITDLPRGVFGGLYTLQLLLLNANKINCIRPDA-FQDLQNLSLLSLY 413
Score = 127 (49.8 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 42/152 (27%), Positives = 73/152 (48%)
Query: 220 VLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSS 279
++ +G LT ++ A L ++T++ L N + + P L+ + +++NQ +
Sbjct: 292 IVDCRGKGLT-AIPANLP--ETMTEIRLELNGIKS-IPPGAFSPYRKLRRIDLSNNQIAE 347
Query: 280 VRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNL 339
+ A GL L SL + N+I L F L TL L L N+I + + L NL
Sbjct: 348 IAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNL 407
Query: 340 TTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
+ L L N +++L + T L+++Q L L N
Sbjct: 408 SLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQN 439
Score = 122 (48.0 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 50/174 (28%), Positives = 78/174 (44%)
Query: 61 NDLCACDL--PHTLRCTANKSDLYAISESLRGLEPDERV--SLLDCTLSN--VTVLP--G 112
N C D+ PH RC A+ + + S + ER+ S + L+N +++L G
Sbjct: 504 NSECTSDVACPHKCRCEASVVECSGLKLS----KIPERIPQSTTELRLNNNEISILEATG 559
Query: 113 KFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDR 172
F + L + +S+ ++ I DG F G +S + L L N L V + L L
Sbjct: 560 LFKKLSHLKKINLSNNKVSEIEDGTFEGATS-VSELHLTANQLESVRSGMFRGL-DGLRT 617
Query: 173 LDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGN 226
L L +N++ + N SF GL ++ L L N + T+S L L L L N
Sbjct: 618 LMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLAN 671
Score = 118 (46.6 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 36/128 (28%), Positives = 59/128 (46%)
Query: 199 LSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGP 258
L N + ++ +P LR + L N++ A QGLRS+ L L N + L
Sbjct: 316 LELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITD-LPR 374
Query: 259 STVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHL 318
L +L++L + N+ + +R A L L+ LS + N+I L +F +L + L
Sbjct: 375 GVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTL 434
Query: 319 DLAHNRIV 326
LA N +
Sbjct: 435 HLAQNPFI 442
Score = 117 (46.2 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 32/103 (31%), Positives = 53/103 (51%)
Query: 221 LRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSV 280
L L GN+ T+ V L + + +DLS+N ++ L S+ +S L L +++N +
Sbjct: 766 LYLDGNQFTL-VPGQLSTFKYLQLVDLSNNKISS-LSNSSFTNMSQLTTLILSYNALQCI 823
Query: 281 RRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 323
A GL L LS H N + L++ F +++LSHL + N
Sbjct: 824 PPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAIGAN 866
Score = 115 (45.5 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 35/105 (33%), Positives = 57/105 (54%)
Query: 287 GLDK-LTSLSCHHNQIDVLEDHSFRALSTLSHL---DLAHNRIVAVSGASLAHLSNLTTL 342
G+ K +T L NQ ++ LST +L DL++N+I ++S +S ++S LTTL
Sbjct: 758 GIPKNVTELYLDGNQFTLVPGQ----LSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTL 813
Query: 343 DLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTM 387
LS+N L+ + L+SL+ L L ND+S E I+ ++
Sbjct: 814 ILSYNALQCIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSL 858
Score = 101 (40.6 bits), Expect = 7.0e-14, Sum P(3) = 7.0e-14
Identities = 29/115 (25%), Positives = 56/115 (48%)
Query: 292 TSLSCHHNQIDVLEDHS-FRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLR 350
T L ++N+I +LE F+ LS L ++L++N++ + + ++++ L L+ N L
Sbjct: 543 TELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLE 602
Query: 351 ALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELIYSGVWRHSTLLIP 405
++ + L L+ L L +N IS + G + L +Y H T + P
Sbjct: 603 SVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDN---HITTISP 654
Score = 94 (38.1 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 30/116 (25%), Positives = 55/116 (47%)
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 317
P +P+ ++ L + NQF+ V G L+ L + +N+I L + SF +S L+
Sbjct: 756 PKGIPK--NVTELYLDGNQFTLVP-GQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTT 812
Query: 318 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 373
L L++N + + + L +L L L N + L + + + SL L + N +
Sbjct: 813 LILSYNALQCIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAIGANPL 868
Score = 80 (33.2 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 20/66 (30%), Positives = 36/66 (54%)
Query: 628 NNSDSRYVKLQATTIL-LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLED 686
N S+++ +++ T +S+ L + NQ SVR G GLD L +L +N+I + +
Sbjct: 571 NLSNNKVSEIEDGTFEGATSVSELHLTANQLESVRSGMFRGLDGLRTLMLRNNRISCIHN 630
Query: 687 HSFSNV 692
SF+ +
Sbjct: 631 DSFTGL 636
Score = 72 (30.4 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 19/79 (24%), Positives = 39/79 (49%)
Query: 618 VAQQEDDINRNNSDSRYVKLQATTIL--LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLS 675
+ Q ++ NN++ L+AT + LS LK +++++N+ S + G G ++ L
Sbjct: 538 IPQSTTELRLNNNEISI--LEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELH 595
Query: 676 CHHNQIDVLEDHSFSNVIG 694
NQ++ + F + G
Sbjct: 596 LTANQLESVRSGMFRGLDG 614
Score = 65 (27.9 bits), Expect = 7.0e-14, Sum P(3) = 7.0e-14
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
+S L L +++N + A GL L LS H N + L++ F++V
Sbjct: 807 MSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADV 855
Score = 63 (27.2 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 20/75 (26%), Positives = 34/75 (45%)
Query: 315 LSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 374
++ L L N+ V G L+ L +DLS+N + +L+ T + L L L N +
Sbjct: 763 VTELYLDGNQFTLVPG-QLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQ 821
Query: 375 MEPECIYVGFNTMDL 389
P + G ++ L
Sbjct: 822 CIPPLAFQGLRSLRL 836
Score = 57 (25.1 bits), Expect = 7.2e-09, Sum P(2) = 7.2e-09
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L +L++L + N+ + +R A L L+ LS + N+I L +F+++
Sbjct: 380 LYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSL 428
Score = 54 (24.1 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L SL L + N+ + + RG GL L L + N+I+ + +F ++
Sbjct: 356 LRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDL 404
Score = 46 (21.3 bits), Expect = 5.9e-12, Sum P(3) = 5.9e-12
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 655 NQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
NQF+ V G L+ L + +N+I L + SF+N+
Sbjct: 771 NQFTLVP-GQLSTFKYLQLVDLSNNKISSLSNSSFTNM 807
>UNIPROTKB|O88279 [details] [associations]
symbol:Slit1 "Slit homolog 1 protein" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:69307 GO:GO:0005737 GO:GO:0005615
GO:GO:0007420 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186
GO:GO:0043395 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 GO:GO:0051964
Pfam:PF01463 GO:GO:0022028 GO:GO:0050919 GO:GO:0048843 CTD:6585
HOGENOM:HOG000116120 HOVERGEN:HBG057959 KO:K06838 OrthoDB:EOG4VDPXM
EMBL:AB011530 EMBL:AF133730 EMBL:AB073213 EMBL:AB073214
EMBL:AB073215 EMBL:AB017170 IPI:IPI00389760 IPI:IPI00409983
IPI:IPI00409984 IPI:IPI00409985 PIR:T42218 RefSeq:NP_075242.1
UniGene:Rn.30002 ProteinModelPortal:O88279 SMR:O88279 STRING:O88279
PRIDE:O88279 GeneID:65047 KEGG:rno:65047 UCSC:RGD:69307
InParanoid:O88279 NextBio:613884 ArrayExpress:O88279
Genevestigator:O88279 GermOnline:ENSRNOG00000026065 Uniprot:O88279
Length = 1531
Score = 166 (63.5 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 85/343 (24%), Positives = 143/343 (41%)
Query: 67 DLP-HTLRCTANKSDLYAISES-LRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLV 124
++P +T R N +++ I ++ GL+ + L++ + V G F + L L
Sbjct: 58 NIPRNTERLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVE--RGAFDDMKELERLR 115
Query: 125 ISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLE 184
++ +L+ + + F + L L L N L VP A A +L L L NQ+ +E
Sbjct: 116 LNRNQLQVLPELLFQN-NQALSRLDLSENSLQAVPRKAFRG-ATDLKNLQLDKNQISCIE 173
Query: 185 NTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSV-VAAL-QGLRSV 242
+F+ L L L L+ N + T+ + LR RL N L +A L Q LR
Sbjct: 174 EGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQR 233
Query: 243 TDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLT--------SL 294
+ L +GP L L V + ++FS +G A + T
Sbjct: 234 PTIGL-FTQCSGPAS------LRGLNVAEVQKSEFSCSGQGEAAQVPACTLSSGSCPAMC 286
Query: 295 SCHHNQIDVLEDHSFRAL-----STLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFL 349
SC + +D A+ T++ + L N I ++ + + L +DLS+N +
Sbjct: 287 SCSNGIVDC-RGKGLTAIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQI 345
Query: 350 RALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELI 392
+ D L+SL L L N I+ P ++ G T+ L L+
Sbjct: 346 AEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLL 388
Score = 153 (58.9 bits), Expect = 7.0e-14, Sum P(3) = 7.0e-14
Identities = 43/137 (31%), Positives = 70/137 (51%)
Query: 141 LSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLS 200
L + + L N + +P A +P L R+DLS+NQ+ ++ +F+GL SLN L L
Sbjct: 307 LPETMTEIRLELNGIKSIPPGAFSPYR-KLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLY 365
Query: 201 YNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPST 260
NK+ L + L TL++L L N++ A Q L++++ L L N + L T
Sbjct: 366 GNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQS-LAKGT 424
Query: 261 VPRLSSLKVLSIAHNQF 277
L +++ L +A N F
Sbjct: 425 FTSLRAIQTLHLAQNPF 441
Score = 144 (55.7 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 38/131 (29%), Positives = 72/131 (54%)
Query: 148 LGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTL 207
L L NN +S++ + L +L +++LS+N++ ++E+ +F+G +S++ L L+ N+L ++
Sbjct: 545 LRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLESV 604
Query: 208 SQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSL 267
L LR L L+ NR++ + GLR+V L L N + + P L +L
Sbjct: 605 RSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHIT-TISPGAFDTLQAL 663
Query: 268 KVLSIAHNQFS 278
L++ N F+
Sbjct: 664 STLNLLANPFN 674
Score = 139 (54.0 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 37/144 (25%), Positives = 68/144 (47%)
Query: 240 RSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 299
+S T+L L++N ++ +LS LK +++++N+ S + G G ++ L N
Sbjct: 540 QSTTELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTAN 599
Query: 300 QIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITP 359
Q++ + FR L L L L +NRI + S L N+ L L N + ++
Sbjct: 600 QLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDT 659
Query: 360 LKSLQELRLDDNDISMEPECIYVG 383
L++L L L N + + ++G
Sbjct: 660 LQALSTLNLLANPFNCNCQLAWLG 683
Score = 128 (50.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 87/348 (25%), Positives = 144/348 (41%)
Query: 60 KNDLCACDLPHTLRCTANKSDLYAISESLRGLEPD-ERVSLLDCTLSNVTVLPGK-FLEG 117
KND L+ N+ + A+ RG D + + L + + VLP F
Sbjct: 78 KNDFAGLKQLRVLQLMENQ--IGAVE---RGAFDDMKELERLRLNRNQLQVLPELLFQNN 132
Query: 118 VTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSH 177
L L +S L+ + AF G ++ L+ L L N +S + A L L+ L L++
Sbjct: 133 QALSRLDLSENSLQAVPRKAFRG-ATDLKNLQLDKNQISCIEEGAFRALR-GLEVLTLNN 190
Query: 178 NQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDC-LAPLVT-LRVLRLQGNRLTVSVVAA 235
N + + +SF + L L N L DC LA L LR G S A+
Sbjct: 191 NNITTIPVSSFNHMPKLRTFRLHSNHLFC---DCHLAWLSQWLRQRPTIGLFTQCSGPAS 247
Query: 236 LQGLRSVTDLDLSHNLLAGPLGPSTVPR--LSS--LKVLSIAHNQFSSVRRGALAGL--- 288
L+GL +V ++ S +G + VP LSS + N R L +
Sbjct: 248 LRGL-NVAEVQKSEFSCSGQGEAAQVPACTLSSGSCPAMCSCSNGIVDCRGKGLTAIPAN 306
Query: 289 --DKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSH 346
+ +T + N I + +F L +DL++N+I ++ + L +L +L L
Sbjct: 307 LPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYG 366
Query: 347 NFLRALTQDLITPLKSLQELRLDDNDIS-MEPECIYVGFNTMDLELIY 393
N + L + + L +LQ L L+ N I+ + P+ + + L +Y
Sbjct: 367 NKITDLPRGVFGGLYTLQLLLLNANKINCIRPDA-FQDLQNLSLLSLY 413
Score = 127 (49.8 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 42/152 (27%), Positives = 73/152 (48%)
Query: 220 VLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSS 279
++ +G LT ++ A L ++T++ L N + + P L+ + +++NQ +
Sbjct: 292 IVDCRGKGLT-AIPANLP--ETMTEIRLELNGIKS-IPPGAFSPYRKLRRIDLSNNQIAE 347
Query: 280 VRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNL 339
+ A GL L SL + N+I L F L TL L L N+I + + L NL
Sbjct: 348 IAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNL 407
Query: 340 TTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
+ L L N +++L + T L+++Q L L N
Sbjct: 408 SLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQN 439
Score = 122 (48.0 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 50/174 (28%), Positives = 78/174 (44%)
Query: 61 NDLCACDL--PHTLRCTANKSDLYAISESLRGLEPDERV--SLLDCTLSN--VTVLP--G 112
N C D+ PH RC A+ + + S + ER+ S + L+N +++L G
Sbjct: 504 NSECTSDVACPHKCRCEASVVECSGLKLS----KIPERIPQSTTELRLNNNEISILEATG 559
Query: 113 KFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDR 172
F + L + +S+ ++ I DG F G +S + L L N L V + L L
Sbjct: 560 LFKKLSHLKKINLSNNKVSEIEDGTFEGATS-VSELHLTANQLESVRSGMFRGL-DGLRT 617
Query: 173 LDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGN 226
L L +N++ + N SF GL ++ L L N + T+S L L L L N
Sbjct: 618 LMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLAN 671
Score = 118 (46.6 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 36/128 (28%), Positives = 59/128 (46%)
Query: 199 LSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGP 258
L N + ++ +P LR + L N++ A QGLRS+ L L N + L
Sbjct: 316 LELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITD-LPR 374
Query: 259 STVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHL 318
L +L++L + N+ + +R A L L+ LS + N+I L +F +L + L
Sbjct: 375 GVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTL 434
Query: 319 DLAHNRIV 326
LA N +
Sbjct: 435 HLAQNPFI 442
Score = 117 (46.2 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 32/103 (31%), Positives = 53/103 (51%)
Query: 221 LRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSV 280
L L GN+ T+ V L + + +DLS+N ++ L S+ +S L L +++N +
Sbjct: 766 LYLDGNQFTL-VPGQLSTFKYLQLVDLSNNKISS-LSNSSFTNMSQLTTLILSYNALQCI 823
Query: 281 RRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 323
A GL L LS H N + L++ F +++LSHL + N
Sbjct: 824 PPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAIGAN 866
Score = 115 (45.5 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 35/105 (33%), Positives = 57/105 (54%)
Query: 287 GLDK-LTSLSCHHNQIDVLEDHSFRALSTLSHL---DLAHNRIVAVSGASLAHLSNLTTL 342
G+ K +T L NQ ++ LST +L DL++N+I ++S +S ++S LTTL
Sbjct: 758 GIPKNVTELYLDGNQFTLVPGQ----LSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTL 813
Query: 343 DLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTM 387
LS+N L+ + L+SL+ L L ND+S E I+ ++
Sbjct: 814 ILSYNALQCIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSL 858
Score = 101 (40.6 bits), Expect = 7.0e-14, Sum P(3) = 7.0e-14
Identities = 29/115 (25%), Positives = 56/115 (48%)
Query: 292 TSLSCHHNQIDVLEDHS-FRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLR 350
T L ++N+I +LE F+ LS L ++L++N++ + + ++++ L L+ N L
Sbjct: 543 TELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLE 602
Query: 351 ALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELIYSGVWRHSTLLIP 405
++ + L L+ L L +N IS + G + L +Y H T + P
Sbjct: 603 SVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDN---HITTISP 654
Score = 94 (38.1 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 30/116 (25%), Positives = 55/116 (47%)
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 317
P +P+ ++ L + NQF+ V G L+ L + +N+I L + SF +S L+
Sbjct: 756 PKGIPK--NVTELYLDGNQFTLVP-GQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTT 812
Query: 318 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 373
L L++N + + + L +L L L N + L + + + SL L + N +
Sbjct: 813 LILSYNALQCIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAIGANPL 868
Score = 80 (33.2 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 20/66 (30%), Positives = 36/66 (54%)
Query: 628 NNSDSRYVKLQATTIL-LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLED 686
N S+++ +++ T +S+ L + NQ SVR G GLD L +L +N+I + +
Sbjct: 571 NLSNNKVSEIEDGTFEGATSVSELHLTANQLESVRSGMFRGLDGLRTLMLRNNRISCIHN 630
Query: 687 HSFSNV 692
SF+ +
Sbjct: 631 DSFTGL 636
Score = 72 (30.4 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 19/79 (24%), Positives = 39/79 (49%)
Query: 618 VAQQEDDINRNNSDSRYVKLQATTIL--LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLS 675
+ Q ++ NN++ L+AT + LS LK +++++N+ S + G G ++ L
Sbjct: 538 IPQSTTELRLNNNEISI--LEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELH 595
Query: 676 CHHNQIDVLEDHSFSNVIG 694
NQ++ + F + G
Sbjct: 596 LTANQLESVRSGMFRGLDG 614
Score = 65 (27.9 bits), Expect = 7.0e-14, Sum P(3) = 7.0e-14
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
+S L L +++N + A GL L LS H N + L++ F++V
Sbjct: 807 MSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADV 855
Score = 63 (27.2 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 20/75 (26%), Positives = 34/75 (45%)
Query: 315 LSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 374
++ L L N+ V G L+ L +DLS+N + +L+ T + L L L N +
Sbjct: 763 VTELYLDGNQFTLVPG-QLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQ 821
Query: 375 MEPECIYVGFNTMDL 389
P + G ++ L
Sbjct: 822 CIPPLAFQGLRSLRL 836
Score = 57 (25.1 bits), Expect = 7.2e-09, Sum P(2) = 7.2e-09
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L +L++L + N+ + +R A L L+ LS + N+I L +F+++
Sbjct: 380 LYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSL 428
Score = 54 (24.1 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L SL L + N+ + + RG GL L L + N+I+ + +F ++
Sbjct: 356 LRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDL 404
Score = 46 (21.3 bits), Expect = 5.9e-12, Sum P(3) = 5.9e-12
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 655 NQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
NQF+ V G L+ L + +N+I L + SF+N+
Sbjct: 771 NQFTLVP-GQLSTFKYLQLVDLSNNKISSLSNSSFTNM 807
>RGD|1593785 [details] [associations]
symbol:Lrrtm2 "leucine rich repeat transmembrane neuronal 2"
species:10116 "Rattus norvegicus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0042043 "neurexin
family protein binding" evidence=IPI] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0050808 "synapse organization"
evidence=ISO;IDA] [GO:0060076 "excitatory synapse" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 RGD:1593785 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 InterPro:IPR003591
SMART:SM00369 GO:GO:0050808 InterPro:IPR000372 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GO:GO:0060076 EMBL:CH473974
CTD:26045 OrthoDB:EOG4PG60Z IPI:IPI00202163 RefSeq:NP_001102939.1
UniGene:Rn.218238 Ensembl:ENSRNOT00000026825 GeneID:685472
KEGG:rno:685472 UCSC:RGD:1593785 NextBio:729781 Uniprot:D4A7P2
Length = 515
Score = 211 (79.3 bits), Expect = 7.3e-14, P = 7.3e-14
Identities = 88/323 (27%), Positives = 144/323 (44%)
Query: 148 LGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTL 207
L L +N ++ + A + L L L HNQ+ ++ +F+GL L L LS NK+ L
Sbjct: 66 LSLRHNHITALERDQFASFS-QLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYL 124
Query: 208 SQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVP-RL-- 264
L+ L+ L L N+L+ GLR + L L N L T+P RL
Sbjct: 125 PNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLR------TIPVRLFW 178
Query: 265 --SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 322
SL+ L ++ N+ S+ R AGL KL L HNQ+ + F LS+L L L
Sbjct: 179 DCRSLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQW 238
Query: 323 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYV 382
N+I ++ S L LDL+ N ++A+ + + +L+ L +D+N ++ I
Sbjct: 239 NKISNLTCGMEWTWSTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILS 298
Query: 383 GFNTMDLELIYSGVWRHSTLLIPVMLSLCT-RSSVVTRYRYCVVL-----IEGSNILDQS 436
++ + +W S P + +L + S R+ + ++ +G +ILD
Sbjct: 299 SLRSLTTVGLSGNLWECS----PRVCALASWLGSFQGRWEHSILCHSPDHTQGEDILDA- 353
Query: 437 ALVLGCSEILALVPTLTSQPLSY 459
V G L T+T+ +Y
Sbjct: 354 --VHGFQLCWNLSTTVTAMATTY 374
Score = 156 (60.0 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 54/197 (27%), Positives = 95/197 (48%)
Query: 105 SNVTVLPGK-FLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSAL 163
+ + LP F + + L L +S +L ++ F GL LQ L L +N L +P
Sbjct: 119 NKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRK-LQTLHLRSNSLRTIPVRLF 177
Query: 164 APLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRL 223
+L+ LDLS N+L L F GL L L L +N+L ++ L +L L L
Sbjct: 178 WDCR-SLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFL 236
Query: 224 QGNRLTVSVVAALQGLRSVTD-LDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRR 282
Q N+++ ++ ++ S + LDL+ N + + + + +LK+L + +N+ +S+
Sbjct: 237 QWNKIS-NLTCGMEWTWSTLEKLDLTGNEIKA-IDLTVFETMPNLKILLMDNNKLNSLDS 294
Query: 283 GALAGLDKLTSLSCHHN 299
L+ L LT++ N
Sbjct: 295 KILSSLRSLTTVGLSGN 311
>MGI|MGI:1915522 [details] [associations]
symbol:Lingo1 "leucine rich repeat and Ig domain containing
1" species:10090 "Mus musculus" [GO:0005154 "epidermal growth
factor receptor binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IMP;IDA] [GO:0031175 "neuron projection
development" evidence=IDA] [GO:0043491 "protein kinase B signaling
cascade" evidence=IDA] [GO:0048715 "negative regulation of
oligodendrocyte differentiation" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:1915522 GO:GO:0016021 GO:GO:0005886
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0043491 GO:GO:0031175
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GO:GO:0021954 HSSP:P21809 GO:GO:0048715
GeneTree:ENSGT00690000101682 HOGENOM:HOG000246971 OrthoDB:EOG40S0F8
CTD:84894 HOVERGEN:HBG057546 EMBL:AK027262 EMBL:AK163538
EMBL:BC052384 EMBL:BC065696 EMBL:AY324324 IPI:IPI00134200
RefSeq:NP_851419.1 UniGene:Mm.246605 ProteinModelPortal:Q9D1T0
SMR:Q9D1T0 IntAct:Q9D1T0 STRING:Q9D1T0 PhosphoSite:Q9D1T0
PaxDb:Q9D1T0 PRIDE:Q9D1T0 Ensembl:ENSMUST00000053568
Ensembl:ENSMUST00000114247 GeneID:235402 KEGG:mmu:235402
InParanoid:Q9D1T0 ChiTaRS:LINGO1 NextBio:382644 Bgee:Q9D1T0
Genevestigator:Q9D1T0 Uniprot:Q9D1T0
Length = 614
Score = 203 (76.5 bits), Expect = 7.5e-14, Sum P(2) = 7.5e-14
Identities = 75/274 (27%), Positives = 123/274 (44%)
Query: 116 EGVTLHGLVISSGE--LKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRL 173
EG+ ++ G+ +K ++ F L+ L L N++S V A L NL L
Sbjct: 61 EGIPTETRLLDLGKNRIKTLNQDEFASFPH-LEELELNENIVSAVEPGAFNNLF-NLRTL 118
Query: 174 DLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVV 233
L N+L + F GLS+L LD+S NK++ L L L+ L + N L
Sbjct: 119 GLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISH 178
Query: 234 AALQGLRSVTDLDLSH-NLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLT 292
A GL S+ L L NL + P + L L VL + H +++R + L +L
Sbjct: 179 RAFSGLNSLEQLTLEKCNLTSIPT--EALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLK 236
Query: 293 SLSCHH-NQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRA 351
L H +D + + L+ L+ L + H + AV ++ HL L L+LS+N +
Sbjct: 237 VLEISHWPYLDTMTPNCLYGLN-LTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIGT 295
Query: 352 LTQDLITPLKSLQELRLDDNDISMEPECIYVGFN 385
+ ++ L LQE++L +++ + G N
Sbjct: 296 IEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLN 329
Score = 202 (76.2 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 76/276 (27%), Positives = 127/276 (46%)
Query: 109 VLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAP 168
V PG F L L + S LK I G F GLS+ L L + N + ++ L
Sbjct: 104 VEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSN-LTKLDISENKIVILLDYMFQDLY- 161
Query: 169 NLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRL 228
NL L++ N L + + +F GL+SL L L L ++ + L+ L L VLRL+ L
Sbjct: 162 NLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLR--HL 219
Query: 229 TVSVVA--ALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALA 286
++ + + + L + L++SH + P+ + L+ L LSI H ++V A+
Sbjct: 220 NINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLN-LTSLSITHCNLTAVPYLAVR 278
Query: 287 GLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSH 346
L L L+ +N I +E L L + L ++ V + L+ L L++S
Sbjct: 279 HLVYLRFLNLSYNPIGTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSG 338
Query: 347 NFLRALTQDLITPLKSLQELRLDDNDISMEPECIYV 382
N L L + + +L+ L LD N ++ + ++V
Sbjct: 339 NQLTTLEESAFHSVGNLETLILDSNPLACDCRLLWV 374
Score = 178 (67.7 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 61/254 (24%), Positives = 117/254 (46%)
Query: 140 GLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDL 199
G+ + + L L N + + A P+L+ L+L+ N + +E +F L +L L L
Sbjct: 62 GIPTETRLLDLGKNRIKTLNQDEFASF-PHLEELELNENIVSAVEPGAFNNLFNLRTLGL 120
Query: 200 SYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPS 259
N+L + L L L + N++ + + Q L ++ L++ N L +
Sbjct: 121 RSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVY-ISHR 179
Query: 260 TVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 319
L+SL+ L++ +S+ AL+ L L L H I+ + D+SF+ L L L+
Sbjct: 180 AFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLE 239
Query: 320 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI-SMEPE 378
++H + + + NLT+L ++H L A+ + L L+ L L N I ++E
Sbjct: 240 ISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIGTIEGS 299
Query: 379 CIYVGFNTMDLELI 392
++ +++L+
Sbjct: 300 MLHELLRLQEIQLV 313
Score = 178 (67.7 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 68/226 (30%), Positives = 110/226 (48%)
Query: 100 LDCTLSNVTVLPGKFLEGV-TLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVV 158
LD + + + +L + + L L + +L IS AF GL+S L+ L L L+ +
Sbjct: 142 LDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNS-LEQLTLEKCNLTSI 200
Query: 159 PTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSY-NKLMTLSQDCLAPLVT 217
PT AL+ L L L L H + + + SFK L L L++S+ L T++ +CL L
Sbjct: 201 PTEALSHLH-GLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGL-N 258
Query: 218 LRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQF 277
L L + LT A++ L + L+LS+N + G + S + L L+ + + Q
Sbjct: 259 LTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPI-GTIEGSMLHELLRLQEIQLVGGQL 317
Query: 278 SSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 323
+ V A GL+ L L+ NQ+ LE+ +F ++ L L L N
Sbjct: 318 AVVEPYAFRGLNYLRVLNVSGNQLTTLEESAFHSVGNLETLILDSN 363
Score = 136 (52.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 62/214 (28%), Positives = 101/214 (47%)
Query: 67 DLPHTLRCTANKSDLYAISE-SLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVI 125
DL + +DL IS + GL E+++L C N+T +P + L LHGL++
Sbjct: 159 DLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKC---NLTSIPTEALSH--LHGLIV 213
Query: 126 SSGELKNIS---DGAFIGLSSPLQALGLPN-NLLSVVPTSALAPLAPNLDRLDLSHNQLY 181
NI+ D +F L L+ L + + L + + L L NL L ++H L
Sbjct: 214 LRLRHLNINAIRDYSFKRLYR-LKVLEISHWPYLDTMTPNCLYGL--NLTSLSITHCNLT 270
Query: 182 KLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRS 241
+ + + L L FL+LSYN + T+ L L+ L+ ++L G +L V A +GL
Sbjct: 271 AVPYLAVRHLVYLRFLNLSYNPIGTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNY 330
Query: 242 VTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHN 275
+ L++S N L L S + +L+ L + N
Sbjct: 331 LRVLNVSGNQLT-TLEESAFHSVGNLETLILDSN 363
Score = 133 (51.9 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 34/131 (25%), Positives = 60/131 (45%)
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 317
P +P + ++L + N+ ++ + A L L + N + +E +F L L
Sbjct: 60 PEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRT 117
Query: 318 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEP 377
L L NR+ + LSNLT LD+S N + L + L +L+ L + DND+
Sbjct: 118 LGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYIS 177
Query: 378 ECIYVGFNTMD 388
+ G N+++
Sbjct: 178 HRAFSGLNSLE 188
Score = 129 (50.5 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 41/146 (28%), Positives = 70/146 (47%)
Query: 233 VAALQGLRSVTDL-DLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKL 291
VA +G+ + T L DL N + L L+ L + N S+V GA L L
Sbjct: 57 VAVPEGIPTETRLLDLGKNRIK-TLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNL 115
Query: 292 TSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRA 351
+L N++ ++ F LS L+ LD++ N+IV + L NL +L++ N L
Sbjct: 116 RTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVY 175
Query: 352 LTQDLITPLKSLQELRLDDNDISMEP 377
++ + L SL++L L+ +++ P
Sbjct: 176 ISHRAFSGLNSLEQLTLEKCNLTSIP 201
Score = 56 (24.8 bits), Expect = 7.5e-14, Sum P(2) = 7.5e-14
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L+ + + Q + V A GL+ L L+ NQ+ LE+ +F +V
Sbjct: 304 LLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESAFHSV 352
Score = 46 (21.3 bits), Expect = 8.1e-13, Sum P(2) = 8.1e-13
Identities = 10/38 (26%), Positives = 21/38 (55%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
L+ L+VL+++ NQ +++ A + L +L N +
Sbjct: 328 LNYLRVLNVSGNQLTTLEESAFHSVGNLETLILDSNPL 365
Score = 39 (18.8 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 646 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLE 685
+L LSI H ++V A+ L L L+ +N I +E
Sbjct: 258 NLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIGTIE 297
>UNIPROTKB|G3V881 [details] [associations]
symbol:Lingo1 "Leucine rich repeat neuronal 6A, isoform
CRA_a" species:10116 "Rattus norvegicus" [GO:0005154 "epidermal
growth factor receptor binding" evidence=IEA] [GO:0021954 "central
nervous system neuron development" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0043491 "protein
kinase B signaling cascade" evidence=IEA] [GO:0048715 "negative
regulation of oligodendrocyte differentiation" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 RGD:1308668 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 EMBL:CH473975
GeneTree:ENSGT00690000101682 CTD:84894 RefSeq:NP_001094192.1
UniGene:Rn.20269 ProteinModelPortal:G3V881 SMR:G3V881 PRIDE:G3V881
Ensembl:ENSRNOT00000023084 GeneID:315691 KEGG:rno:315691
NextBio:669664 Uniprot:G3V881
Length = 620
Score = 203 (76.5 bits), Expect = 7.7e-14, Sum P(2) = 7.7e-14
Identities = 75/274 (27%), Positives = 123/274 (44%)
Query: 116 EGVTLHGLVISSGE--LKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRL 173
EG+ ++ G+ +K ++ F L+ L L N++S V A L NL L
Sbjct: 67 EGIPTETRLLDLGKNRIKTLNQDEFASFPH-LEELELNENIVSAVEPGAFNNLF-NLRTL 124
Query: 174 DLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVV 233
L N+L + F GLS+L LD+S NK++ L L L+ L + N L
Sbjct: 125 GLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISH 184
Query: 234 AALQGLRSVTDLDLSH-NLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLT 292
A GL S+ L L NL + P + L L VL + H +++R + L +L
Sbjct: 185 RAFSGLNSLEQLTLEKCNLTSIPT--EALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLK 242
Query: 293 SLSCHH-NQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRA 351
L H +D + + L+ L+ L + H + AV ++ HL L L+LS+N +
Sbjct: 243 VLEISHWPYLDTMTPNCLYGLN-LTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIGT 301
Query: 352 LTQDLITPLKSLQELRLDDNDISMEPECIYVGFN 385
+ ++ L LQE++L +++ + G N
Sbjct: 302 IEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLN 335
Score = 202 (76.2 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 76/276 (27%), Positives = 127/276 (46%)
Query: 109 VLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAP 168
V PG F L L + S LK I G F GLS+ L L + N + ++ L
Sbjct: 110 VEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSN-LTKLDISENKIVILLDYMFQDLY- 167
Query: 169 NLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRL 228
NL L++ N L + + +F GL+SL L L L ++ + L+ L L VLRL+ L
Sbjct: 168 NLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLR--HL 225
Query: 229 TVSVVA--ALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALA 286
++ + + + L + L++SH + P+ + L+ L LSI H ++V A+
Sbjct: 226 NINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLN-LTSLSITHCNLTAVPYLAVR 284
Query: 287 GLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSH 346
L L L+ +N I +E L L + L ++ V + L+ L L++S
Sbjct: 285 HLVYLRFLNLSYNPIGTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSG 344
Query: 347 NFLRALTQDLITPLKSLQELRLDDNDISMEPECIYV 382
N L L + + +L+ L LD N ++ + ++V
Sbjct: 345 NQLTTLEESAFHSVGNLETLILDSNPLACDCRLLWV 380
Score = 178 (67.7 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 61/254 (24%), Positives = 117/254 (46%)
Query: 140 GLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDL 199
G+ + + L L N + + A P+L+ L+L+ N + +E +F L +L L L
Sbjct: 68 GIPTETRLLDLGKNRIKTLNQDEFASF-PHLEELELNENIVSAVEPGAFNNLFNLRTLGL 126
Query: 200 SYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPS 259
N+L + L L L + N++ + + Q L ++ L++ N L +
Sbjct: 127 RSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVY-ISHR 185
Query: 260 TVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 319
L+SL+ L++ +S+ AL+ L L L H I+ + D+SF+ L L L+
Sbjct: 186 AFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLE 245
Query: 320 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI-SMEPE 378
++H + + + NLT+L ++H L A+ + L L+ L L N I ++E
Sbjct: 246 ISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIGTIEGS 305
Query: 379 CIYVGFNTMDLELI 392
++ +++L+
Sbjct: 306 MLHELLRLQEIQLV 319
Score = 178 (67.7 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 68/226 (30%), Positives = 110/226 (48%)
Query: 100 LDCTLSNVTVLPGKFLEGV-TLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVV 158
LD + + + +L + + L L + +L IS AF GL+S L+ L L L+ +
Sbjct: 148 LDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNS-LEQLTLEKCNLTSI 206
Query: 159 PTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSY-NKLMTLSQDCLAPLVT 217
PT AL+ L L L L H + + + SFK L L L++S+ L T++ +CL L
Sbjct: 207 PTEALSHLH-GLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGL-N 264
Query: 218 LRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQF 277
L L + LT A++ L + L+LS+N + G + S + L L+ + + Q
Sbjct: 265 LTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPI-GTIEGSMLHELLRLQEIQLVGGQL 323
Query: 278 SSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 323
+ V A GL+ L L+ NQ+ LE+ +F ++ L L L N
Sbjct: 324 AVVEPYAFRGLNYLRVLNVSGNQLTTLEESAFHSVGNLETLILDSN 369
Score = 136 (52.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 62/214 (28%), Positives = 101/214 (47%)
Query: 67 DLPHTLRCTANKSDLYAISE-SLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVI 125
DL + +DL IS + GL E+++L C N+T +P + L LHGL++
Sbjct: 165 DLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKC---NLTSIPTEALSH--LHGLIV 219
Query: 126 SSGELKNIS---DGAFIGLSSPLQALGLPN-NLLSVVPTSALAPLAPNLDRLDLSHNQLY 181
NI+ D +F L L+ L + + L + + L L NL L ++H L
Sbjct: 220 LRLRHLNINAIRDYSFKRLYR-LKVLEISHWPYLDTMTPNCLYGL--NLTSLSITHCNLT 276
Query: 182 KLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRS 241
+ + + L L FL+LSYN + T+ L L+ L+ ++L G +L V A +GL
Sbjct: 277 AVPYLAVRHLVYLRFLNLSYNPIGTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNY 336
Query: 242 VTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHN 275
+ L++S N L L S + +L+ L + N
Sbjct: 337 LRVLNVSGNQLT-TLEESAFHSVGNLETLILDSN 369
Score = 133 (51.9 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 34/131 (25%), Positives = 60/131 (45%)
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 317
P +P + ++L + N+ ++ + A L L + N + +E +F L L
Sbjct: 66 PEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRT 123
Query: 318 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEP 377
L L NR+ + LSNLT LD+S N + L + L +L+ L + DND+
Sbjct: 124 LGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYIS 183
Query: 378 ECIYVGFNTMD 388
+ G N+++
Sbjct: 184 HRAFSGLNSLE 194
Score = 129 (50.5 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 41/146 (28%), Positives = 70/146 (47%)
Query: 233 VAALQGLRSVTDL-DLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKL 291
VA +G+ + T L DL N + L L+ L + N S+V GA L L
Sbjct: 63 VAVPEGIPTETRLLDLGKNRIK-TLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNL 121
Query: 292 TSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRA 351
+L N++ ++ F LS L+ LD++ N+IV + L NL +L++ N L
Sbjct: 122 RTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVY 181
Query: 352 LTQDLITPLKSLQELRLDDNDISMEP 377
++ + L SL++L L+ +++ P
Sbjct: 182 ISHRAFSGLNSLEQLTLEKCNLTSIP 207
Score = 56 (24.8 bits), Expect = 7.7e-14, Sum P(2) = 7.7e-14
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L+ + + Q + V A GL+ L L+ NQ+ LE+ +F +V
Sbjct: 310 LLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESAFHSV 358
Score = 46 (21.3 bits), Expect = 8.4e-13, Sum P(2) = 8.4e-13
Identities = 10/38 (26%), Positives = 21/38 (55%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
L+ L+VL+++ NQ +++ A + L +L N +
Sbjct: 334 LNYLRVLNVSGNQLTTLEESAFHSVGNLETLILDSNPL 371
Score = 39 (18.8 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 646 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLE 685
+L LSI H ++V A+ L L L+ +N I +E
Sbjct: 264 NLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIGTIE 303
>UNIPROTKB|F1P0K8 [details] [associations]
symbol:Gga.13956 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007165 "signal transduction" evidence=IEA]
Pfam:PF00560 InterPro:IPR000488 InterPro:IPR001611 PROSITE:PS50017
PROSITE:PS51450 GO:GO:0007165 InterPro:IPR003591 SMART:SM00369
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
InterPro:IPR025875 Pfam:PF12799 GeneTree:ENSGT00700000104287
EMBL:AADN02000699 IPI:IPI00585441 ProteinModelPortal:F1P0K8
Ensembl:ENSGALT00000015265 OMA:CYLESAD Uniprot:F1P0K8
Length = 713
Score = 201 (75.8 bits), Expect = 7.9e-14, Sum P(2) = 7.9e-14
Identities = 85/277 (30%), Positives = 131/277 (47%)
Query: 139 IGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLD 198
I L L+ L + +N LS +P P N+ L L+HN + + F L SL L+
Sbjct: 64 ISLLHKLKVLNVSHNRLSCLPEEL--PKLVNIKELFLNHNNI---DEFPF-ALKSLETLE 117
Query: 199 LSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGP 258
L+ NKL TLS D + + L+VL + N++++ L L ++ L L N + P
Sbjct: 118 LAGNKLKTLS-DTMVDMKNLKVLNIDSNQISI-FPRVLCYLPNLVSLSLCENFIQSL--P 173
Query: 259 STVPRLSSLKVLSIAHNQ--FSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLS 316
+ L L+ S++HN+ F SV+ L L KL L N+++ L D L L+
Sbjct: 174 KDIKGLKKLQEFSVSHNKLMFLSVQ---LFQLTKLKRLRADDNKLEFLSD-KVENLRELT 229
Query: 317 HLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISME 376
L+L+ N ++ +L + + L L L N L L + I LK L+EL L N ++
Sbjct: 230 FLNLSKNLFKTITD-NLCNCTMLKHLILCDNQLTQLPAN-IDRLKHLKELSLSGNQLNSL 287
Query: 377 PECIYVGFNTMDLELIYSGVWRHSTLLIPVMLSLCTR 413
E I + +EL SG + IPV L CT+
Sbjct: 288 DEQISHLKDLSKIEL--SG---NVLTYIPVELKTCTQ 319
Score = 189 (71.6 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 93/338 (27%), Positives = 156/338 (46%)
Query: 59 IKNDLCACD-LPHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVT--VLPGKFL 115
I ++LC C L H + C + L A + L+ L+ +SL L+++ + K L
Sbjct: 241 ITDNLCNCTMLKHLILCDNQLTQLPANIDRLKHLK---ELSLSGNQLNSLDEQISHLKDL 297
Query: 116 EGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDL 175
+ L G V++ ++ + + + L NN LS P AL L+ +L L+L
Sbjct: 298 SKIELSGNVLTYIPVE-------LKTCTQITKADLSNNKLSQFPY-ALCALS-DLKYLNL 348
Query: 176 SHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAA 235
S N + +L + L L+L+ NKL + S CL L L L + N + S+ A
Sbjct: 349 SGNSISELI-PGISDIKDLEHLELNKNKLSSFSA-CLCSLTKLVYLDVSENEIN-SLPAV 405
Query: 236 LQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLS 295
+ ++++ L L HN G P + L LK L I++NQ ++ ++ L+ + L+
Sbjct: 406 VSEMKALQVLLLHHNKF-GSF-PEELCSLKGLKTLDISNNQIKTIPL-KISRLETIKDLN 462
Query: 296 CHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGA--SLAHLSNLTTLDLSHNFLRALT 353
+NQ LS+L L + + ++ L+ L +L LD+SHN L+ +
Sbjct: 463 VSNNQFASFPSEICH-LSSLEKLTVCQMNGLKLTKIPEELSKLVSLRELDISHNALKEMP 521
Query: 354 QDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLEL 391
D I LK L L ++N+IS P+ I N L+L
Sbjct: 522 -DSIGELKYLVHLIANNNEISQLPKSITSLRNLQHLDL 558
Score = 172 (65.6 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 70/235 (29%), Positives = 113/235 (48%)
Query: 145 LQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKL 204
L+ L L N LS ++ L L L LD+S N++ L + + +L L L +NK
Sbjct: 366 LEHLELNKNKLSSF-SACLCSLT-KLVYLDVSENEINSLPAVVSE-MKALQVLLLHHNKF 422
Query: 205 MTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRL 264
+ ++ L L L+ L + N++ ++ + L ++ DL++S+N A PS + L
Sbjct: 423 GSFPEE-LCSLKGLKTLDISNNQIK-TIPLKISRLETIKDLNVSNNQFAS--FPSEICHL 478
Query: 265 SSLKVLSIAHNQFSSVRR--GALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 322
SSL+ L++ + + L+ L L L HN + + D S L L HL +A+
Sbjct: 479 SSLEKLTVCQMNGLKLTKIPEELSKLVSLRELDISHNALKEMPD-SIGELKYLVHL-IAN 536
Query: 323 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEP 377
N ++ S+ L NL LDLS N LR L L L L+++ D N + EP
Sbjct: 537 NNEISQLPKSITSLRNLQHLDLSENRLRYLPAGL-RHLYLLKDINFDGNSL-FEP 589
Score = 151 (58.2 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 52/175 (29%), Positives = 87/175 (49%)
Query: 199 LSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGP 258
L N++ TL + + L L +L L+ NRLT + + L + L++SHN L+ P
Sbjct: 29 LQNNEIKTLRLNTVN-LTNLEILILERNRLT-QLPPEISLLHKLKVLNVSHNRLS--CLP 84
Query: 259 STVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHL 318
+P+L ++K L + HN L L +L N++ L D + + L L
Sbjct: 85 EELPKLVNIKELFLNHNNIDEFP----FALKSLETLELAGNKLKTLSD-TMVDMKNLKVL 139
Query: 319 DLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 373
++ N+I ++ L +L NL +L L NF+++L +D I LK LQE + N +
Sbjct: 140 NIDSNQI-SIFPRVLCYLPNLVSLSLCENFIQSLPKD-IKGLKKLQEFSVSHNKL 192
Score = 147 (56.8 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 67/236 (28%), Positives = 107/236 (45%)
Query: 145 LQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKL 204
L +L L N + +P L +SHN+L L F+ L+ L L NKL
Sbjct: 159 LVSLSLCENFIQSLPKDIKG--LKKLQEFSVSHNKLMFLSVQLFQ-LTKLKRLRADDNKL 215
Query: 205 MTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRL 264
LS D + L L L L N L ++ L + L L N L L P+ + RL
Sbjct: 216 EFLS-DKVENLRELTFLNLSKN-LFKTITDNLCNCTMLKHLILCDNQLT-QL-PANIDRL 271
Query: 265 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 324
LK LS++ NQ +S+ ++ L L+ + N + + + + ++ DL++N+
Sbjct: 272 KHLKELSLSGNQLNSLDE-QISHLKDLSKIELSGNVLTYIPVE-LKTCTQITKADLSNNK 329
Query: 325 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECI 380
+ A L LS+L L+LS N + L I+ +K L+ L L+ N +S C+
Sbjct: 330 LSQFPYA-LCALSDLKYLNLSGNSISELIPG-ISDIKDLEHLELNKNKLSSFSACL 383
Score = 120 (47.3 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 50/171 (29%), Positives = 86/171 (50%)
Query: 221 LRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSV 280
LRL L ++A + ++V L L +N + L +TV L++L++L + N+ + +
Sbjct: 4 LRLSDKGLQDVPLSASE-TQNVKTLLLQNNEIK-TLRLNTV-NLTNLEILILERNRLTQL 60
Query: 281 RRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLT 340
++ L KL L+ HN++ L + L + L L HN I A L +L
Sbjct: 61 PP-EISLLHKLKVLNVSHNRLSCLPEE-LPKLVNIKELFLNHNNIDEFPFA----LKSLE 114
Query: 341 TLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLEL 391
TL+L+ N L+ L+ D + +K+L+ L +D N IS+ P + N + L L
Sbjct: 115 TLELAGNKLKTLS-DTMVDMKNLKVLNIDSNQISIFPRVLCYLPNLVSLSL 164
Score = 60 (26.2 bits), Expect = 7.9e-14, Sum P(2) = 7.9e-14
Identities = 19/61 (31%), Positives = 30/61 (49%)
Query: 624 DINRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDV 683
D++ N +S L A + +L+VL + HN+F S L L L +L +NQI
Sbjct: 393 DVSENEINS----LPAVVSEMKALQVLLLHHNKFGSFPE-ELCSLKGLKTLDISNNQIKT 447
Query: 684 L 684
+
Sbjct: 448 I 448
Score = 49 (22.3 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 14/47 (29%), Positives = 29/47 (61%)
Query: 628 NNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGA--LAGLDKLT 672
+N+ + + L+ + L ++K L++++NQF+S L+ L+KLT
Sbjct: 441 SNNQIKTIPLKISR--LETIKDLNVSNNQFASFPSEICHLSSLEKLT 485
Score = 45 (20.9 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 631 DSRYVKLQATTILLSSLKVLSIAHNQFSSV 660
D++ +L A L LK LS++ NQ +S+
Sbjct: 258 DNQLTQLPANIDRLKHLKELSLSGNQLNSL 287
>UNIPROTKB|O15335 [details] [associations]
symbol:CHAD "Chondroadherin" species:9606 "Homo sapiens"
[GO:0001502 "cartilage condensation" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=TAS] [GO:0005201
"extracellular matrix structural constituent" evidence=NAS]
[GO:0001558 "regulation of cell growth" evidence=NAS] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0001558 GO:GO:0005578
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 EMBL:CH471109 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0001502 GO:GO:0005201 CTD:1101
HOGENOM:HOG000013150 HOVERGEN:HBG005324 KO:K06248 EMBL:U96769
EMBL:U96767 EMBL:U96768 EMBL:AF371328 EMBL:AK292177 EMBL:BC036360
EMBL:BC073974 IPI:IPI00014592 RefSeq:NP_001258.2 UniGene:Hs.97220
ProteinModelPortal:O15335 SMR:O15335 STRING:O15335 PRIDE:O15335
Ensembl:ENST00000258969 Ensembl:ENST00000508540 GeneID:1101
KEGG:hsa:1101 UCSC:uc010dbr.3 GeneCards:GC17M048541 HGNC:HGNC:1909
HPA:HPA018241 MIM:602178 neXtProt:NX_O15335 PharmGKB:PA26445
InParanoid:O15335 OMA:CHCHGGD PhylomeDB:O15335 GenomeRNAi:1101
NextBio:4554 Bgee:O15335 CleanEx:HS_CHAD Genevestigator:O15335
GermOnline:ENSG00000136457 Uniprot:O15335
Length = 359
Score = 206 (77.6 bits), Expect = 8.7e-14, P = 8.7e-14
Identities = 60/200 (30%), Positives = 97/200 (48%)
Query: 173 LDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSV 232
L LSHN + L +F L+ L +L L +NK+ L + L+PLV L +L+L N++
Sbjct: 104 LYLSHNDIRVLRAGAFDDLTELTYLYLDHNKVTELPRGLLSPLVNLFILQLNNNKIRELR 163
Query: 233 VAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLT 292
A QG + + L LS N L+ L P + + +L + NQ SS AL+ L +
Sbjct: 164 AGAFQGAKDLRWLYLSENALSS-LQPGALDDVENLAKFHVDRNQLSSYPSAALSKLRVVE 222
Query: 293 SLSCHHNQIDVLEDHSFRALST-LSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRA 351
L HN + + D++F++ L L L + + S + ++ L + L +N L
Sbjct: 223 ELKLSHNPLKSIPDNAFQSFGRYLETLWLDNTNLEKFSDGAFLGVTTLKHVHLENNRLNQ 282
Query: 352 LTQDLITPLKSLQELRLDDN 371
L + P SL+ L L +N
Sbjct: 283 LPSNF--PFDSLETLALTNN 300
Score = 164 (62.8 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 63/250 (25%), Positives = 109/250 (43%)
Query: 145 LQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSS-LNFLDLSYNK 203
L +LGL L ++P A P + DL H K+ +S L+L N
Sbjct: 7 LLSLGL---LAGLLPALAACPQNCHCHS-DLQHVICDKVGLQKIPKVSEKTKLLNLQRNN 62
Query: 204 LMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPR 263
L+ + + L L LQ ++ A +GL+ + L LSHN + L
Sbjct: 63 FPVLAANSFRAMPNLVSLHLQHCQIREVAAGAFRGLKQLIYLYLSHNDIR-VLRAGAFDD 121
Query: 264 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 323
L+ L L + HN+ + + RG L+ L L L ++N+I L +F+ L L L+ N
Sbjct: 122 LTELTYLYLDHNKVTELPRGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDLRWLYLSEN 181
Query: 324 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVG 383
+ ++ +L + NL + N L + ++ L+ ++EL+L N + P+ +
Sbjct: 182 ALSSLQPGALDDVENLAKFHVDRNQLSSYPSAALSKLRVVEELKLSHNPLKSIPDNAFQS 241
Query: 384 FNTMDLELIY 393
F LE ++
Sbjct: 242 FGRY-LETLW 250
>UNIPROTKB|Q2EEY0 [details] [associations]
symbol:TLR9 "Uncharacterized protein" species:9796 "Equus
caballus" [GO:0035197 "siRNA binding" evidence=ISS] [GO:0045078
"positive regulation of interferon-gamma biosynthetic process"
evidence=ISS] [GO:0045356 "positive regulation of interferon-alpha
biosynthetic process" evidence=ISS] [GO:0045359 "positive
regulation of interferon-beta biosynthetic process" evidence=ISS]
InterPro:IPR000157 InterPro:IPR001611 InterPro:IPR027181
Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450 GO:GO:0005783
GO:GO:0005886 GO:GO:0007165 GO:GO:0006955 GO:GO:0005768
GO:GO:0045944 InterPro:IPR003591 SMART:SM00369 GO:GO:0032755
GO:GO:0030277 GO:GO:0005764 GO:GO:0051607 GO:GO:0050727
GO:GO:0032715 GO:GO:0032009 GO:GO:0035197 GO:GO:0032760
GO:GO:0032735 GO:GO:0051770 GO:GO:0045078 GO:GO:0032733
GO:GO:0032728 SUPFAM:SSF52200 GO:GO:0045359
GeneTree:ENSGT00680000099674 GO:GO:0032741 GO:GO:0045356
HOGENOM:HOG000230468 HOVERGEN:HBG018601 PANTHER:PTHR24373:SF37
OMA:VGGNCRR CTD:54106 KO:K10161 EMBL:DQ390541 RefSeq:NP_001075259.1
UniGene:Eca.12487 STRING:Q2EEY0 Ensembl:ENSECAT00000014884
GeneID:100009693 KEGG:ecb:100009693 InParanoid:Q2EEY0
Uniprot:Q2EEY0
Length = 1031
Score = 215 (80.7 bits), Expect = 8.7e-14, P = 8.7e-14
Identities = 93/302 (30%), Positives = 143/302 (47%)
Query: 100 LDCTLSN-VTVLPGKFLEGVTLHGLVISSGELKNISDGA-FIGLSSPLQALGLPNNLLSV 157
LD + +N VTV P F + L L +S + +G+ F+ L+S LQ L L +N L +
Sbjct: 477 LDLSRNNLVTVQPEMFAQLSRLQCLRLSHNSISQAVNGSQFVPLTS-LQVLDLSHNKLDL 535
Query: 158 VPTSALAPLAPNLDRLDLSHN-QLYKLE----NTSFKG-LSSLNFLDLSYNKLMT-LSQD 210
+ L P L+ LDLS+N Q + + N SF L +L +L L++N + + +SQ
Sbjct: 536 YHGRSFTEL-PRLEALDLSYNSQPFSMRGVGHNLSFVAQLPTLRYLSLAHNGIHSRVSQQ 594
Query: 211 CLAPLVTLRVLRLQGNRLTVS------VVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRL 264
+ +L L GN L+ + QGLRS+ LDLS N L L P T+ L
Sbjct: 595 LCS--TSLWALDFSGNSLSQMWAEGDLYLRFFQGLRSLIRLDLSQNRLHTLL-PCTLGNL 651
Query: 265 -SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 323
SL++L + +N + +L L L +L NQ+ L + S + + L LD++ N
Sbjct: 652 PKSLQLLRLRNNYLAFFNWSSLTLLPNLETLDLAGNQLKALSNGSLPSGTQLQRLDVSRN 711
Query: 324 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLK-SLQELRLDDNDISMEPECIYV 382
I+ V A + L L+LS N LR + L SL+ L + N + +V
Sbjct: 712 SIIFVVPGFFALATRLRELNLSANALRTVEPSWFGFLAGSLEVLDVSANPLHCACGAAFV 771
Query: 383 GF 384
F
Sbjct: 772 DF 773
Score = 152 (58.6 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 72/249 (28%), Positives = 108/249 (43%)
Query: 145 LQALGLPNNLLSVVPTSALAPLA--PNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYN 202
LQ L + + L PLA P L RL L N + + + FK L ++DLS N
Sbjct: 366 LQELDMHGIFFRSLSQKTLQPLARLPMLQRLYLQMNFINQAQLGIFKDFPGLRYIDLSDN 425
Query: 203 KLM-------TLSQDCLAPLVTLRVLRLQGNRL-TVSVVAALQGLRSVT-DLDLSHNLLA 253
++ T + V L L L T S + ++++ LDLS N L
Sbjct: 426 RISGAVEPVATTGEVDGGKKVWLTSRDLTPGPLDTPSSEDFMPSCKNLSFTLDLSRNNLV 485
Query: 254 GPLGPSTVPRLSSLKVLSIAHNQFSSVRRGA-LAGLDKLTSLSCHHNQIDVLEDHSFRAL 312
+ P +LS L+ L ++HN S G+ L L L HN++D+ SF L
Sbjct: 486 -TVQPEMFAQLSRLQCLRLSHNSISQAVNGSQFVPLTSLQVLDLSHNKLDLYHGRSFTEL 544
Query: 313 STLSHLDLAHN------RIVAVSGASLAHLSNLTTLDLSHNFLRA-LTQDLITPLKSLQE 365
L LDL++N R V + + +A L L L L+HN + + ++Q L + SL
Sbjct: 545 PRLEALDLSYNSQPFSMRGVGHNLSFVAQLPTLRYLSLAHNGIHSRVSQQLCST--SLWA 602
Query: 366 LRLDDNDIS 374
L N +S
Sbjct: 603 LDFSGNSLS 611
Score = 145 (56.1 bits), Expect = 9.0e-09, Sum P(2) = 9.0e-09
Identities = 83/300 (27%), Positives = 129/300 (43%)
Query: 100 LDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVP 159
L+ + + +T +P L +L L++S + + + GL + L+ L + N P
Sbjct: 128 LNLSYNGITTVPA--LPS-SLVSLILSRTNILQLDPTSLTGLHA-LRFLYMDGNCYYKNP 183
Query: 160 TSALAPLAPN--LDRLDLSHNQL-YKLENTSFKGLS-SLNFLDLSYNKLMTLSQDCLAPL 215
+AP L +L+H L Y T + L SL +L LSYN ++TL+ + LA L
Sbjct: 184 CGRALEVAPGALLGLGNLTHLSLKYNNLTTVPRSLPPSLEYLLLSYNHIVTLAPEDLANL 243
Query: 216 VTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHN 275
LRVL + GN R+ ++ H L T LS L+ L + +
Sbjct: 244 TALRVLDVGGN------CRRCDHARNPC-VECPHKF--PQLHSDTFSHLSRLEGLVLKDS 294
Query: 276 QFSSVRRGALAGLDKLTSLSCHHNQI-D-VLEDHSFRALSTLSHLDLAHNRIVAVSGA-- 331
+ GL LT L N + D + + +F+ L+ L L+L+ N VS A
Sbjct: 295 SLYQLNPRWFRGLGNLTVLDLSENFLYDCITKTKAFQGLAQLRRLNLSFNYHKKVSFAHL 354
Query: 332 ----SLAHLSNLTTLDLSHNFLRALTQDLITPLKSL---QELRLDDNDISMEPECIYVGF 384
S L +L LD+ F R+L+Q + PL L Q L L N I+ I+ F
Sbjct: 355 TLAPSFGSLLSLQELDMHGIFFRSLSQKTLQPLARLPMLQRLYLQMNFINQAQLGIFKDF 414
Score = 74 (31.1 bits), Expect = 9.0e-09, Sum P(2) = 9.0e-09
Identities = 21/70 (30%), Positives = 35/70 (50%)
Query: 624 DINRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGA-LAGLDKLTSLSCHHNQID 682
D++RNN + ++ A LS L+ L ++HN S G+ L L L HN++D
Sbjct: 478 DLSRNNLVTVQPEMFAQ---LSRLQCLRLSHNSISQAVNGSQFVPLTSLQVLDLSHNKLD 534
Query: 683 VLEDHSFSNV 692
+ SF+ +
Sbjct: 535 LYHGRSFTEL 544
Score = 53 (23.7 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 643 LLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
LL +L+ L +A NQ ++ G+L +L L N I
Sbjct: 675 LLPNLETLDLAGNQLKALSNGSLPSGTQLQRLDVSRNSI 713
Score = 53 (23.7 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 15/52 (28%), Positives = 28/52 (53%)
Query: 628 NNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 679
+NS S+ V + + L+SL+VL ++HN+ + L +L +L +N
Sbjct: 505 HNSISQAVN-GSQFVPLTSLQVLDLSHNKLDLYHGRSFTELPRLEALDLSYN 555
Score = 43 (20.2 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 17/61 (27%), Positives = 28/61 (45%)
Query: 630 SDSRYVKLQATTI--LLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDH 687
S +R L T+ L SL++L + +N + +L L L +L NQ+ L +
Sbjct: 636 SQNRLHTLLPCTLGNLPKSLQLLRLRNNYLAFFNWSSLTLLPNLETLDLAGNQLKALSNG 695
Query: 688 S 688
S
Sbjct: 696 S 696
Score = 42 (19.8 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 605 RNSTIHHHACFIPVAQQEDDINRNNSDSRYVKLQATTILLSSLKVLSIAHN 655
RNS I F +A + ++N + + R V+ L SL+VL ++ N
Sbjct: 710 RNSIIFVVPGFFALATRLRELNLSANALRTVEPSWFGFLAGSLEVLDVSAN 760
Score = 41 (19.5 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 650 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
L ++ N +V+ A L +L L HN I
Sbjct: 477 LDLSRNNLVTVQPEMFAQLSRLQCLRLSHNSI 508
Score = 38 (18.4 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 644 LSSLKVLSIAHNQFSS 659
L +L+ LS+AHN S
Sbjct: 574 LPTLRYLSLAHNGIHS 589
>MGI|MGI:1098644 [details] [associations]
symbol:Mfhas1 "malignant fibrous histiocytoma amplified
sequence 1" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1098644
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875
Pfam:PF12799 InterPro:IPR020859 PROSITE:PS51424 HSSP:P07359
GeneTree:ENSGT00690000102098 EMBL:AC129082 EMBL:AC129211
EMBL:AK081646 EMBL:AK132349 EMBL:AK171731 IPI:IPI00669835
RefSeq:NP_001074748.1 UniGene:Mm.103246 ProteinModelPortal:Q3V1N1
SMR:Q3V1N1 STRING:Q3V1N1 PhosphoSite:Q3V1N1 PRIDE:Q3V1N1
Ensembl:ENSMUST00000037666 GeneID:52065 KEGG:mmu:52065
UCSC:uc009lla.1 CTD:9258 HOGENOM:HOG000113571 HOVERGEN:HBG108130
InParanoid:Q3V1N1 OMA:FFQRDAS OrthoDB:EOG4CVG64 ChiTaRS:MFHAS1
NextBio:308456 Bgee:Q3V1N1 Genevestigator:Q3V1N1 Uniprot:Q3V1N1
Length = 1048
Score = 215 (80.7 bits), Expect = 8.9e-14, P = 8.9e-14
Identities = 84/255 (32%), Positives = 126/255 (49%)
Query: 141 LSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLS 200
L L L + +N L+++ ++ L L +L+LSHNQL L L+ L LD+S
Sbjct: 105 LGHHLTELDVSHNRLTILGAEVVSALR-ELRKLNLSHNQLPALP-AQLGALAHLEELDVS 162
Query: 201 YNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPST 260
+N+L L D + L LR L + N+LT LQ L ++ +LD+S N L G P
Sbjct: 163 FNRLAHLP-DSFSCLNHLRTLDVDHNQLTAFPQQLLQ-LAALEELDVSSNRLRGL--PED 218
Query: 261 VPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 320
+ L +LK+L ++ + ++ RG L L SL +N + L D F L L L+L
Sbjct: 219 ISALRALKILWLSGAELGTLPRG-FCELASLESLMLDNNGLQALPDE-FSRLQRLKMLNL 276
Query: 321 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECI 380
+ N + A+L L+ L L LS N L ++ LI L L L LD+N I P+ I
Sbjct: 277 SSN-LFEEFPAALLPLAGLEELYLSRNQLTSVPS-LIAGLGRLLTLWLDNNRIRYLPDSI 334
Query: 381 YVGFNTMDLELIYSG 395
V ++ EL+ G
Sbjct: 335 -VELTGLE-ELVLQG 347
Score = 193 (73.0 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 64/189 (33%), Positives = 100/189 (52%)
Query: 191 LSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHN 250
+ + L+L N L + + + L +LRVL L+ NR A + +T+LD+SHN
Sbjct: 58 IGDIEVLNLGNNGLEDVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHN 117
Query: 251 LLAGPLGPSTVPRLSSLKVLSIAHNQFSSV--RRGALAGLDKLTSLSCHHNQIDVLEDHS 308
L LG V L L+ L+++HNQ ++ + GALA L++L N++ L D S
Sbjct: 118 RLT-ILGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEEL---DVSFNRLAHLPD-S 172
Query: 309 FRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRL 368
F L+ L LD+ HN++ A L L+ L LD+S N LR L +D I+ L++L+ L L
Sbjct: 173 FSCLNHLRTLDVDHNQLTAFP-QQLLQLAALEELDVSSNRLRGLPED-ISALRALKILWL 230
Query: 369 DDNDISMEP 377
++ P
Sbjct: 231 SGAELGTLP 239
Score = 185 (70.2 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 74/258 (28%), Positives = 119/258 (46%)
Query: 123 LVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYK 182
L + + L+++ +G L S L+ L L N + +P A+A L +L LD+SHN+L
Sbjct: 64 LNLGNNGLEDVPEGLGSALGS-LRVLVLRRNRFARLPP-AVAELGHHLTELDVSHNRLTI 121
Query: 183 LENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSV 242
L L L L+LS+N+L L L L L L + NRL + + L +
Sbjct: 122 LGAEVVSALRELRKLNLSHNQLPALPAQ-LGALAHLEELDVSFNRLA-HLPDSFSCLNHL 179
Query: 243 TDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID 302
LD+ HN L P + +L++L+ L ++ N+ + ++ L L L ++
Sbjct: 180 RTLDVDHNQLTA--FPQQLLQLAALEELDVSSNRLRGLPED-ISALRALKILWLSGAELG 236
Query: 303 VLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKS 362
L F L++L L L +N + A+ + L L L+LS N L+ PL
Sbjct: 237 TLP-RGFCELASLESLMLDNNGLQALPD-EFSRLQRLKMLNLSSNLFEEFPAALL-PLAG 293
Query: 363 LQELRLDDNDISMEPECI 380
L+EL L N ++ P I
Sbjct: 294 LEELYLSRNQLTSVPSLI 311
Score = 184 (69.8 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 84/270 (31%), Positives = 126/270 (46%)
Query: 110 LPGKFLE-GVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAP 168
LP E G L L +S L I + L+ L L +N L +P L LA
Sbjct: 98 LPPAVAELGHHLTELDVSHNRL-TILGAEVVSALRELRKLNLSHNQLPALPAQ-LGALA- 154
Query: 169 NLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRL 228
+L+ LD+S N+L L + SF L+ L LD+ +N+L Q L L L L + NRL
Sbjct: 155 HLEELDVSFNRLAHLPD-SFSCLNHLRTLDVDHNQLTAFPQQLLQ-LAALEELDVSSNRL 212
Query: 229 TVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGL 288
+ + LR++ L LS L G L P L+SL+ L + +N ++ + L
Sbjct: 213 R-GLPEDISALRALKILWLSGAEL-GTL-PRGFCELASLESLMLDNNGLQALP-DEFSRL 268
Query: 289 DKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNF 348
+L L+ N + + L+ L L L+ N++ +V +A L L TL L +N
Sbjct: 269 QRLKMLNLSSNLFEEFPA-ALLPLAGLEELYLSRNQLTSVPSL-IAGLGRLLTLWLDNNR 326
Query: 349 LRALTQDLITPLKSLQELRLDDNDISMEPE 378
+R L D I L L+EL L N I++ P+
Sbjct: 327 IRYLP-DSIVELTGLEELVLQGNQIAVLPD 355
Score = 155 (59.6 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 60/211 (28%), Positives = 100/211 (47%)
Query: 169 NLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVT-LRVLRLQGNR 227
+++ L+L +N L + L SL L L N+ L +A L L L + NR
Sbjct: 60 DIEVLNLGNNGLEDVPEGLGSALGSLRVLVLRRNRFARLPP-AVAELGHHLTELDVSHNR 118
Query: 228 LTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAG 287
LT+ + LR + L+LSHN L P P+ + L+ L+ L ++ N+ + + + +
Sbjct: 119 LTILGAEVVSALRELRKLNLSHNQL--PALPAQLGALAHLEELDVSFNRLAHLP-DSFSC 175
Query: 288 LDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHN 347
L+ L +L HNQ+ + L+ L LD++ NR+ + ++ L L L LS
Sbjct: 176 LNHLRTLDVDHNQLTAFPQQLLQ-LAALEELDVSSNRLRGLP-EDISALRALKILWLSGA 233
Query: 348 FLRALTQDLITPLKSLQELRLDDNDISMEPE 378
L L + L SL+ L LD+N + P+
Sbjct: 234 ELGTLPRGFCE-LASLESLMLDNNGLQALPD 263
Score = 124 (48.7 bits), Expect = 0.00063, P = 0.00063
Identities = 63/216 (29%), Positives = 93/216 (43%)
Query: 68 LPHTLRCTANKSDLYAISESLRGLEPDE-----RVSLLDCTLSNVTVLPGKFLEGVTLHG 122
LP L A+ +L L L PD + LD + +T P + L+ L
Sbjct: 146 LPAQLGALAHLEELDVSFNRLAHL-PDSFSCLNHLRTLDVDHNQLTAFPQQLLQLAALEE 204
Query: 123 LVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYK 182
L +SS L+ + + I L+ L L L +P LA +L+ L L +N L
Sbjct: 205 LDVSSNRLRGLPED--ISALRALKILWLSGAELGTLPRG-FCELA-SLESLMLDNNGLQA 260
Query: 183 LENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSV 242
L + F L L L+LS N L L PL L L L N+LT SV + + GL +
Sbjct: 261 LPD-EFSRLQRLKMLNLSSN-LFEEFPAALLPLAGLEELYLSRNQLT-SVPSLIAGLGRL 317
Query: 243 TDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFS 278
L L +N + P ++ L+ L+ L + NQ +
Sbjct: 318 LTLWLDNNRIR--YLPDSIVELTGLEELVLQGNQIA 351
Score = 114 (45.2 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 41/144 (28%), Positives = 66/144 (45%)
Query: 252 LAGPLGPSTV-P-RLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 309
L P P V P + ++VL++ +N V G + L L L N+ L
Sbjct: 44 LESPDAPQLVLPANIGDIEVLNLGNNGLEDVPEGLGSALGSLRVLVLRRNRFARLPPAVA 103
Query: 310 RALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLD 369
L+ LD++HNR+ + ++ L L L+LSHN L AL L L L+EL +
Sbjct: 104 ELGHHLTELDVSHNRLTILGAEVVSALRELRKLNLSHNQLPALPAQL-GALAHLEELDVS 162
Query: 370 DNDISMEPE---CIYVGFNTMDLE 390
N ++ P+ C+ T+D++
Sbjct: 163 FNRLAHLPDSFSCLN-HLRTLDVD 185
Score = 68 (29.0 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 628 NNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLED 686
N S + + + A + L+ L+ L ++ NQ +SV +AGL +L +L +N+I L D
Sbjct: 275 NLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVP-SLIAGLGRLLTLWLDNNRIRYLPD 332
>UNIPROTKB|F1PB05 [details] [associations]
symbol:TSKU "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0021960 "anterior commissure morphogenesis"
evidence=IEA] [GO:0021670 "lateral ventricle development"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000372
SMART:SM00013 OMA:LTRVDCS GeneTree:ENSGT00390000016740
EMBL:AAEX03012791 Ensembl:ENSCAFT00000008391 Uniprot:F1PB05
Length = 365
Score = 206 (77.6 bits), Expect = 9.4e-14, P = 9.4e-14
Identities = 88/284 (30%), Positives = 136/284 (47%)
Query: 90 GLEPDERVSLLDCTLSNVTVLPGKF-LEGVTLHGLVISSGELKNISDGAFIGLS-SPLQA 147
GL ++ +DC+ ++P L+ T H L +SS L+ +++ G + L
Sbjct: 44 GLFDSFSLTRVDCSGLGPHIVPVPIPLD--TAH-LDLSSNRLETVNESVLAGPGYTTLAG 100
Query: 148 LGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTL 207
L L +NLL+ + +A + L L+ LD+SHN L L SF S L+ ++LS+N+L +
Sbjct: 101 LDLSHNLLTSISPTAFSRLR-YLESLDISHNGLAALPAESFT-CSPLSDVNLSHNRLREV 158
Query: 208 SQDCLAPLVTLRVLRLQ-GNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSS 266
S + R L + + L +V G T S NL L T+P L
Sbjct: 159 SVSAFSTHSQGRALHVDLSHNLIHRLVPHPAGASLPTPTIQSLNLAWNRL--RTIPDLRD 216
Query: 267 L--KVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQ-IDVLEDHSFRALSTLSHLDLAHN 323
L + LS+ N ++V GA GL LT LS Q + L + FR L +L LDL+ N
Sbjct: 217 LPLRYLSLDGNPLAAVGPGAFRGLAGLTHLSLGSLQGLPQLAPYGFRELQSLQVLDLSGN 276
Query: 324 RIVAVSGASL-AHLSNLTTLDLSHNFLRALTQDLITPLKSLQEL 366
+ +GA + + L +L LDLS L L + L+ L +LQ +
Sbjct: 277 PKLKWAGAEVFSGLGSLQELDLSGTSLLPLPETLLIHLPALQSI 320
Score = 187 (70.9 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 79/244 (32%), Positives = 115/244 (47%)
Query: 148 LGLPNNLLSVVPTSALA-PLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMT 206
L L +N L V S LA P L LDLSHN L + T+F L L LD+S+N L
Sbjct: 75 LDLSSNRLETVNESVLAGPGYTTLAGLDLSHNLLTSISPTAFSRLRYLESLDISHNGLAA 134
Query: 207 LSQDCLAPLVTLRVLRLQGNRLT-VSVVA-ALQGLRSVTDLDLSHNLL----AGPLGPST 260
L + L + L NRL VSV A + +DLSHNL+ P G S
Sbjct: 135 LPAESFT-CSPLSDVNLSHNRLREVSVSAFSTHSQGRALHVDLSHNLIHRLVPHPAGAS- 192
Query: 261 VPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 320
+P +++ L++A N+ ++ L L L LS N + + +FR L+ L+HL L
Sbjct: 193 LPT-PTIQSLNLAWNRLRTIPD--LRDLP-LRYLSLDGNPLAAVGPGAFRGLAGLTHLSL 248
Query: 321 AHNR-IVAVSGASLAHLSNLTTLDLSHN-FLRALTQDLITPLKSLQELRLDDNDISMEPE 378
+ + ++ L +L LDLS N L+ ++ + L SLQEL L + PE
Sbjct: 249 GSLQGLPQLAPYGFRELQSLQVLDLSGNPKLKWAGAEVFSGLGSLQELDLSGTSLLPLPE 308
Query: 379 CIYV 382
+ +
Sbjct: 309 TLLI 312
Score = 135 (52.6 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 70/246 (28%), Positives = 110/246 (44%)
Query: 106 NVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAP 165
N +VL G TL GL +S L +IS AF L L++L + +N L+ +P +
Sbjct: 86 NESVLAGPGY--TTLAGLDLSHNLLTSISPTAFSRLRY-LESLDISHNGLAALPAESFT- 141
Query: 166 LAPNLDRLDLSHNQLYKLENTSFKGLSSLNFL--DLSYN---KLMTLSQDCLAPLVTLRV 220
+P L ++LSHN+L ++ ++F S L DLS+N +L+ P T++
Sbjct: 142 CSP-LSDVNLSHNRLREVSVSAFSTHSQGRALHVDLSHNLIHRLVPHPAGASLPTPTIQS 200
Query: 221 LRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQ-FSS 279
L L NRL + L+ L + L L N LA +GP L+ L LS+ Q
Sbjct: 201 LNLAWNRLRT--IPDLRDL-PLRYLSLDGNPLAA-VGPGAFRGLAGLTHLSLGSLQGLPQ 256
Query: 280 VRRGALAGLDKLTSLSCHHN-QIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSN 338
+ L L L N ++ F L +L LDL+ ++ + L HL
Sbjct: 257 LAPYGFRELQSLQVLDLSGNPKLKWAGAEVFSGLGSLQELDLSGTSLLPLPETLLIHLPA 316
Query: 339 LTTLDL 344
L ++ +
Sbjct: 317 LQSISV 322
>UNIPROTKB|F1NJ43 [details] [associations]
symbol:NYX "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0007601
"visual perception" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005622 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 OMA:NISFITP GeneTree:ENSGT00690000101803
EMBL:AADN02011030 IPI:IPI00576878 ProteinModelPortal:F1NJ43
Ensembl:ENSGALT00000030326 Uniprot:F1NJ43
Length = 466
Score = 209 (78.6 bits), Expect = 9.5e-14, P = 9.5e-14
Identities = 75/289 (25%), Positives = 134/289 (46%)
Query: 95 ERVSLLDCTLSNVTVLPGKF-LEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNN 153
ER + C + + +P +F E +++ + +K +S+ AF L S L++L L +N
Sbjct: 34 ERSCSVLCDRAGLGQIPSEFPCEASSIN---LDKNSIKFLSERAFGTLPS-LKSLSLNHN 89
Query: 154 LLSVVPTSALAPLAPNLDRLDLSHNQLYK-LENTSFKGLSSLNFLDLSYNKLMTLSQDCL 212
+S + A L P+L L ++HN+ + L +F L L LDL+ L +
Sbjct: 90 NISFITPGAFKGL-PSLTELKMAHNEYIRYLHTRTFTALRRLVKLDLADCNLFNIPDRIF 148
Query: 213 APLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSI 272
L +L+ L N + A++G+ ++T + L N + + +++ L+ LK L++
Sbjct: 149 IELPSLQELFCFQNNFR-RIPGAIRGMENLTHVYLERNRIEA-VAYNSLQGLTKLKYLNL 206
Query: 273 AHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGAS 332
N+ + V A G K+ L + N I L ++SF L L L+L N + VS
Sbjct: 207 QDNRINVVHERAFQGCRKMEYLYLNDNLISELPENSFDGLRCLKMLNLGGNFLRNVSNTW 266
Query: 333 LAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIY 381
L L L L N + + + L SL L L+ N+++ P ++
Sbjct: 267 FRDLVELEVLYLDRNRINYIEEGAFENLTSLVSLHLNSNNLTTLPFSVF 315
Score = 172 (65.6 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 53/193 (27%), Positives = 87/193 (45%)
Query: 197 LDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPL 256
++L N + LS+ L +L+ L L N ++ A +GL S+T+L ++HN L
Sbjct: 60 INLDKNSIKFLSERAFGTLPSLKSLSLNHNNISFITPGAFKGLPSLTELKMAHNEYIRYL 119
Query: 257 GPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLS 316
T L L L +A ++ L L L C N + + R + L+
Sbjct: 120 HTRTFTALRRLVKLDLADCNLFNIPDRIFIELPSLQELFCFQNNFRRIPG-AIRGMENLT 178
Query: 317 HLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISME 376
H+ L NRI AV+ SL L+ L L+L N + + + + ++ L L+DN IS
Sbjct: 179 HVYLERNRIEAVAYNSLQGLTKLKYLNLQDNRINVVHERAFQGCRKMEYLYLNDNLISEL 238
Query: 377 PECIYVGFNTMDL 389
PE + G + +
Sbjct: 239 PENSFDGLRCLKM 251
Score = 148 (57.2 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 73/312 (23%), Positives = 124/312 (39%)
Query: 64 CACDLPHTLRCTANKSDLYAISESLRGLEPDE---RVSLLDCTLSNVTVLPGKFLEGV-T 119
C P CT +S + G P E S ++ +++ L + + +
Sbjct: 21 CVRSCPANCVCTQERSCSVLCDRAGLGQIPSEFPCEASSINLDKNSIKFLSERAFGTLPS 80
Query: 120 LHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQ 179
L L ++ + I+ GAF GL S + N + + T L L +LDL+
Sbjct: 81 LKSLSLNHNNISFITPGAFKGLPSLTELKMAHNEYIRYLHTRTFTALR-RLVKLDLADCN 139
Query: 180 LYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGL 239
L+ + + F L SL L N + + + L + L+ NR+ +LQGL
Sbjct: 140 LFNIPDRIFIELPSLQELFCFQNNFRRIP-GAIRGMENLTHVYLERNRIEAVAYNSLQGL 198
Query: 240 RSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 299
+ L+L N + + ++ L + N S + + GL L L+ N
Sbjct: 199 TKLKYLNLQDNRI-NVVHERAFQGCRKMEYLYLNDNLISELPENSFDGLRCLKMLNLGGN 257
Query: 300 QIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITP 359
+ + + FR L L L L NRI + + +L++L +L L+ N L L + P
Sbjct: 258 FLRNVSNTWFRDLVELEVLYLDRNRINYIEEGAFENLTSLVSLHLNSNNLTTLPFSVFQP 317
Query: 360 LKSLQELRLDDN 371
+ L L L N
Sbjct: 318 VYFLGRLYLFRN 329
Score = 51 (23.0 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L LK+L++ N +V L +L L N+I+ +E+ +F N+
Sbjct: 246 LRCLKMLNLGGNFLRNVSNTWFRDLVELEVLYLDRNRINYIEEGAFENL 294
>MGI|MGI:2177651 [details] [associations]
symbol:Vasn "vasorin" species:10090 "Mus musculus"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0071456 "cellular response
to hypoxia" evidence=IMP] [GO:0071461 "cellular response to redox
state" evidence=IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR003961 Pfam:PF00008 Pfam:PF00041
PROSITE:PS50026 PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060
SMART:SM00181 MGI:MGI:2177651 GO:GO:0016021 GO:GO:0005739
GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0071461
SUPFAM:SSF49265 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0071456 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104056 CTD:114990 eggNOG:NOG273568
HOGENOM:HOG000261606 HOVERGEN:HBG084318 OMA:VTQLRPN
OrthoDB:EOG4GTKD4 EMBL:AJ458938 EMBL:AK012169 EMBL:AK083684
EMBL:AK132325 EMBL:BC050274 IPI:IPI00321074 RefSeq:NP_647468.2
UniGene:Mm.482140 ProteinModelPortal:Q9CZT5 SMR:Q9CZT5
PhosphoSite:Q9CZT5 PaxDb:Q9CZT5 PRIDE:Q9CZT5
Ensembl:ENSMUST00000038770 GeneID:246154 KEGG:mmu:246154
UCSC:uc007xzz.2 InParanoid:Q9CZT5 NextBio:387103 Bgee:Q9CZT5
Genevestigator:Q9CZT5 GermOnline:ENSMUSG00000039646 Uniprot:Q9CZT5
Length = 673
Score = 212 (79.7 bits), Expect = 9.6e-14, P = 9.6e-14
Identities = 79/256 (30%), Positives = 120/256 (46%)
Query: 102 CTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTS 161
CT T +P + + T+ GL I + + G F GL LQ L L N ++ +P
Sbjct: 39 CTARQGTTVP-RDVPPDTV-GLYIFENGITTLDVGCFAGLPG-LQLLDLSQNQITSLPGG 95
Query: 162 ALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVL 221
PL NL LDL+ N+L+++ N +F+GL L L L N++ + L L L
Sbjct: 96 IFQPLV-NLSNLDLTANKLHEISNETFRGLRRLERLYLGKNRIRHIQPGAFDALDRLLEL 154
Query: 222 RLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVR 281
+L N L V + L L + LDLSHN + P + + ++++ L +A +
Sbjct: 155 KLPDNELRV--LPPLH-LPRLLLLDLSHNSI--PALEAGILDTANVEALRLAGLGLRQLD 209
Query: 282 RGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN-RIVAVSGASLAHLSNLT 340
G L L L NQ++ + + L L+ L LA N RI + LA L+ L
Sbjct: 210 EGLFGRLLNLHDLDVSDNQLEHMPS-VIQGLRGLTRLRLAGNTRIAQIRPEDLAGLTALQ 268
Query: 341 TLDLSHNFLRALTQDL 356
LD+S+ L+AL DL
Sbjct: 269 ELDVSNLSLQALPSDL 284
Score = 168 (64.2 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 57/180 (31%), Positives = 87/180 (48%)
Query: 202 NKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTV 261
N + TL C A L L++L L N++T Q L ++++LDL+ N L + T
Sbjct: 63 NGITTLDVGCFAGLPGLQLLDLSQNQITSLPGGIFQPLVNLSNLDLTANKLH-EISNETF 121
Query: 262 PRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLED-HSFRALSTLSHLDL 320
L L+ L + N+ ++ GA LD+L L N++ VL H L L LDL
Sbjct: 122 RGLRRLERLYLGKNRIRHIQPGAFDALDRLLELKLPDNELRVLPPLH----LPRLLLLDL 177
Query: 321 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECI 380
+HN I A+ A + +N+ L L+ LR L + L L +L +L + DN + P I
Sbjct: 178 SHNSIPALE-AGILDTANVEALRLAGLGLRQLDEGLFGRLLNLHDLDVSDNQLEHMPSVI 236
Score = 166 (63.5 bits), Expect = 9.9e-09, P = 9.9e-09
Identities = 71/246 (28%), Positives = 113/246 (45%)
Query: 136 GAFIGLSSPLQALGLP--NNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSS 193
G + P +GL N ++ + A L P L LDLS NQ+ L F+ L +
Sbjct: 44 GTTVPRDVPPDTVGLYIFENGITTLDVGCFAGL-PGLQLLDLSQNQITSLPGGIFQPLVN 102
Query: 194 LNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLA 253
L+ LDL+ NKL +S + L L L L NR+ A L + +L L N L
Sbjct: 103 LSNLDLTANKLHEISNETFRGLRRLERLYLGKNRIRHIQPGAFDALDRLLELKLPDNELR 162
Query: 254 GPLGPSTVPRLSSLKVLSIAHNQFSSVRRGAL--AGLDKLTSLSCHHNQIDVLEDHSFRA 311
L P +PRL +L ++HN ++ G L A ++ L Q+D + F
Sbjct: 163 -VLPPLHLPRLL---LLDLSHNSIPALEAGILDTANVEALRLAGLGLRQLD---EGLFGR 215
Query: 312 LSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNF-LRALTQDLITPLKSLQELRLDD 370
L L LD++ N++ + + L LT L L+ N + + + + L +LQEL D
Sbjct: 216 LLNLHDLDVSDNQLEHMPSV-IQGLRGLTRLRLAGNTRIAQIRPEDLAGLTALQEL--DV 272
Query: 371 NDISME 376
+++S++
Sbjct: 273 SNLSLQ 278
Score = 155 (59.6 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 60/221 (27%), Positives = 102/221 (46%)
Query: 87 SLRG--LEPDERVSLLDCTLSNVTVLPGKFLEGVT-LHGLVISSGELKNISDGAFIGLSS 143
SL G +P +S LD T + + + + G+ L L + +++I GAF L
Sbjct: 91 SLPGGIFQPLVNLSNLDLTANKLHEISNETFRGLRRLERLYLGKNRIRHIQPGAFDALDR 150
Query: 144 PLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNK 203
L+ L LP+N L V+P L P L LDLSHN + LE +++ L L+
Sbjct: 151 LLE-LKLPDNELRVLPPLHL----PRLLLLDLSHNSIPALE-AGILDTANVEALRLAGLG 204
Query: 204 LMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPR 263
L L + L+ L L + N+L + + +QGLR +T L L+ N + P +
Sbjct: 205 LRQLDEGLFGRLLNLHDLDVSDNQLE-HMPSVIQGLRGLTRLRLAGNTRIAQIRPEDLAG 263
Query: 264 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL 304
L++L+ L +++ ++ + +L L+ N + L
Sbjct: 264 LTALQELDVSNLSLQALPSDLSSLFPRLRLLAAARNPFNCL 304
Score = 137 (53.3 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 52/172 (30%), Positives = 76/172 (44%)
Query: 208 SQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPR-LSS 266
S+ CL PL+ L L V + + +QG S + + +TVPR +
Sbjct: 3 SRSCLPPLLLL---------LLVLLGSGVQGCPSGCQCNQPQTVFCTARQGTTVPRDVPP 53
Query: 267 LKV-LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 325
V L I N +++ G AGL L L NQI L F+ L LS+LDL N++
Sbjct: 54 DTVGLYIFENGITTLDVGCFAGLPGLQLLDLSQNQITSLPGGIFQPLVNLSNLDLTANKL 113
Query: 326 VAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEP 377
+S + L L L L N +R + L L EL+L DN++ + P
Sbjct: 114 HEISNETFRGLRRLERLYLGKNRIRHIQPGAFDALDRLLELKLPDNELRVLP 165
Score = 37 (18.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 11/41 (26%), Positives = 19/41 (46%)
Query: 644 LSSLKVLSIAHNQFSSVRRGAL--AGLDKLTSLSCHHNQID 682
L L +L ++HN ++ G L A ++ L Q+D
Sbjct: 169 LPRLLLLDLSHNSIPALEAGILDTANVEALRLAGLGLRQLD 209
>UNIPROTKB|F1S7K2 [details] [associations]
symbol:LRG1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050873 "brown fat cell differentiation" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005615 OMA:RCAGPEA
GO:GO:0050873 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GeneTree:ENSGT00690000102197 EMBL:CU972396
ProteinModelPortal:F1S7K2 Ensembl:ENSSSCT00000014761 Uniprot:F1S7K2
Length = 347
Score = 205 (77.2 bits), Expect = 9.8e-14, P = 9.8e-14
Identities = 68/224 (30%), Positives = 106/224 (47%)
Query: 155 LSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAP 214
L+ +P L + PNL L LS+NQL L + L LDL+ N L L
Sbjct: 80 LTQMPADILQGI-PNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKV 138
Query: 215 LVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAH 274
L L L+ NRL + + L+GL+++ LDLS N L L + + L +L + +
Sbjct: 139 SAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLR-TLPRKLLANFTDLHILDLGN 197
Query: 275 NQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLA 334
NQ ++ L G KL L N++ VLE+ L +L L +N++ ++ +
Sbjct: 198 NQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFR 257
Query: 335 HLSNLTTLDLSHNFLRALTQDLITPL-KSLQELRLDDNDISMEP 377
L L LDLS+N L ++ + L L K+ +++ DIS P
Sbjct: 258 GLQVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGF-DISGNP 300
Score = 196 (74.1 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 63/174 (36%), Positives = 88/174 (50%)
Query: 87 SLRGLEPDERVSLLDCTLSNVTVLP-GKFLEGVTLHGLVISSGELKNISDGAFI-GLSSP 144
S + L P ++ +LD T + + LP G F LH LV+ L +I D +++ GL +
Sbjct: 108 SAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRL-DILDASWLRGLKA- 165
Query: 145 LQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKL 204
L+ L L N L +P LA +L LDL +NQL L +G L +L L N+L
Sbjct: 166 LRHLDLSGNQLRTLPRKLLANFT-DLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRL 224
Query: 205 MTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAG-PLG 257
L + LAP LR L L N+LT A +GL+ + LDLS+N L P G
Sbjct: 225 QVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEG 278
Score = 172 (65.6 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 59/198 (29%), Positives = 97/198 (48%)
Query: 228 LTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAG 287
LT LQG+ ++ +L LS+N L +P + LKVL + N + G
Sbjct: 80 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLP-VPQLKVLDLTRNALKRLPPGLFKV 138
Query: 288 LDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHN 347
L +L N++D+L+ R L L HLDL+ N++ + LA+ ++L LDL +N
Sbjct: 139 SAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNN 198
Query: 348 FLRALTQDLIT-PLKSLQELRLDDNDISM--------EPECIYVGFNTMDLELIYSGVWR 398
L+ L DL+ PLK L+ L L+ N + + +P+ Y+ N L + +G +R
Sbjct: 199 QLQTLPPDLLRGPLK-LEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFR 257
Query: 399 HSTLLIPVMLSLCTRSSV 416
+L + LS + +SV
Sbjct: 258 GLQVLDMLDLSNNSLTSV 275
Score = 149 (57.5 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 57/193 (29%), Positives = 85/193 (44%)
Query: 189 KGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLS 248
+G+ +L L LS N+L LS L P+ L+VL L N L + ++ L L
Sbjct: 89 QGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLK 148
Query: 249 HNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHS 308
N L L S + L +L+ L ++ NQ ++ R LA L L +NQ+ L
Sbjct: 149 ENRL-DILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDL 207
Query: 309 FRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRL 368
R L L L NR+ + LA L L L++N L L L+ L L L
Sbjct: 208 LRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDL 267
Query: 369 DDNDISMEPECIY 381
+N ++ PE ++
Sbjct: 268 SNNSLTSVPEGLW 280
Score = 119 (46.9 bits), Expect = 0.00046, P = 0.00046
Identities = 47/194 (24%), Positives = 78/194 (40%)
Query: 196 FLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGP 255
+L + L + D L + L+ L L N+L L + + LDL+ N L
Sbjct: 72 YLATEFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKR- 130
Query: 256 LGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTL 315
L P ++L L + N+ + L GL L L NQ+ L + L
Sbjct: 131 LPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDL 190
Query: 316 SHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISM 375
LDL +N++ + L L L L N L+ L + + P L+ L L++N ++
Sbjct: 191 HILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTT 250
Query: 376 EPECIYVGFNTMDL 389
+ G +D+
Sbjct: 251 LAAGAFRGLQVLDM 264
>TAIR|locus:2078112 [details] [associations]
symbol:RLP32 "receptor like protein 32" species:3702
"Arabidopsis thaliana" [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006952 "defense response" evidence=ISS] [GO:0016301 "kinase
activity" evidence=ISS] [GO:0007165 "signal transduction"
evidence=IC] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0006612 "protein targeting to membrane" evidence=RCA]
[GO:0009617 "response to bacterium" evidence=RCA] [GO:0009862
"systemic acquired resistance, salicylic acid mediated signaling
pathway" evidence=RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA] [GO:0010310 "regulation of
hydrogen peroxide metabolic process" evidence=RCA] [GO:0010363
"regulation of plant-type hypersensitive response" evidence=RCA]
[GO:0031348 "negative regulation of defense response" evidence=RCA]
[GO:0035304 "regulation of protein dephosphorylation" evidence=RCA]
Pfam:PF00560 InterPro:IPR001611 EMBL:CP002686
GenomeReviews:BA000014_GR eggNOG:COG4886 InterPro:IPR013210
Pfam:PF08263 EMBL:AC011620 HOGENOM:HOG000116562 IPI:IPI00521051
RefSeq:NP_187216.1 UniGene:At.40634 ProteinModelPortal:Q9M9X0
SMR:Q9M9X0 EnsemblPlants:AT3G05650.1 GeneID:819732
KEGG:ath:AT3G05650 TAIR:At3g05650 InParanoid:Q9M9X0 OMA:ENNRIND
PhylomeDB:Q9M9X0 ProtClustDB:CLSN2683476 Genevestigator:Q9M9X0
Uniprot:Q9M9X0
Length = 868
Score = 212 (79.7 bits), Expect = 9.8e-14, Sum P(2) = 9.8e-14
Identities = 74/226 (32%), Positives = 108/226 (47%)
Query: 145 LQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKL 204
L L L N S S + + +L LDLS N +S LS L FLDLS N+
Sbjct: 121 LTTLDLSYNYFSGQIPSCIENFS-HLTTLDLSKNYFSGGIPSSIGNLSQLTFLDLSGNEF 179
Query: 205 MTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRL 264
+ + L L + N LT +L L+ ++DL LS N G L PS + L
Sbjct: 180 VG-EMPFFGNMNQLTNLYVDSNDLTGIFPLSLLNLKHLSDLSLSRNQFTGTL-PSNMSSL 237
Query: 265 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID-VLEDHSFRALSTLSHLDLAHN 323
S+L+ N F+ +L + LTS++ +NQ++ LE + + STL+ LD+++N
Sbjct: 238 SNLEYFEAWGNAFTGTLPSSLFTIASLTSINLRNNQLNGTLEFGNISSPSTLTVLDISNN 297
Query: 324 RIVAVSGASLAHLSNLTTLDLSH-NFLRALTQDLITPLKSLQELRL 368
+ S++ NL LDLSH N + + T LKSLQ L L
Sbjct: 298 NFIGPIPKSISKFINLQDLDLSHLNTQGPVDFSIFTNLKSLQLLNL 343
Score = 151 (58.2 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 58/218 (26%), Positives = 99/218 (45%)
Query: 170 LDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLT 229
L L + N L + S L L+ L LS N+ ++ L L GN T
Sbjct: 192 LTNLYVDSNDLTGIFPLSLLNLKHLSDLSLSRNQFTGTLPSNMSSLSNLEYFEAWGNAFT 251
Query: 230 VSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLD 289
++ ++L + S+T ++L +N L G L + S+L VL I++N F +++
Sbjct: 252 GTLPSSLFTIASLTSINLRNNQLNGTLEFGNISSPSTLTVLDISNNNFIGPIPKSISKFI 311
Query: 290 KLTSLSCHHNQIDVLEDHS-FRALSTLSHLDLAH-NRIVAVSGASL--AHLSNLTTLDLS 345
L L H D S F L +L L+L+H N + +L +HL+++ ++DLS
Sbjct: 312 NLQDLDLSHLNTQGPVDFSIFTNLKSLQLLNLSHLNTTTTIDLNALFSSHLNSIYSMDLS 371
Query: 346 HNFLRALTQDLIT---PLKSLQELRLDDNDISMEPECI 380
N + A T+ + P + + +L L I+ PE +
Sbjct: 372 GNHVSATTKISVADHHPTQLISQLYLSGCGITEFPELL 409
Score = 149 (57.5 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 61/227 (26%), Positives = 102/227 (44%)
Query: 173 LDLSHNQLYKL--ENTSFKGLSSLNFL---DLSYNKLMTLSQDCLAPLVTLRVLRLQGNR 227
LDLS + L N+S + +L FL DLSYN C+ L L L N
Sbjct: 95 LDLSRSCLQSRFHSNSSLFTVLNLRFLTTLDLSYNYFSGQIPSCIENFSHLTTLDLSKNY 154
Query: 228 LTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAG 287
+ + +++ L +T LDLS N G + P ++ L L + N + + +L
Sbjct: 155 FSGGIPSSIGNLSQLTFLDLSGNEFVGEM-PF-FGNMNQLTNLYVDSNDLTGIFPLSLLN 212
Query: 288 LDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHN 347
L L+ LS NQ + +LS L + + N +SL +++LT+++L +N
Sbjct: 213 LKHLSDLSLSRNQFTGTLPSNMSSLSNLEYFEAWGNAFTGTLPSSLFTIASLTSINLRNN 272
Query: 348 FLRALTQ--DLITPLKSLQELRLDDND-ISMEPECIYVGFNTMDLEL 391
L + ++ +P +L L + +N+ I P+ I N DL+L
Sbjct: 273 QLNGTLEFGNISSP-STLTVLDISNNNFIGPIPKSISKFINLQDLDL 318
Score = 147 (56.8 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 66/237 (27%), Positives = 107/237 (45%)
Query: 93 PDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPN 152
P + +S L + +T P + L IS+ ++K G ++ L + L N
Sbjct: 388 PTQLISQLYLSGCGITEFPELLRSQHKMTNLDISNNKIKGQVPG-WLWTLPKLIFVDLSN 446
Query: 153 NLLSVVPTSALAPLA----PNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLS 208
N+ + S L+ P++ L S+N + L SL LDLS N L
Sbjct: 447 NIFTGFERSTEHGLSLITKPSMQYLVGSNNNFTGKIPSFICALRSLITLDLSDNNLNGSI 506
Query: 209 QDCLAPLV-TLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSL 267
C+ L TL L L+ NRL + ++ +S+ LD+ HN L G L P + RLS+L
Sbjct: 507 PPCMGNLKSTLSFLNLRQNRLGGGLPRSI--FKSLRSLDVGHNQLVGKL-PRSFIRLSAL 563
Query: 268 KVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 324
+VL++ +N+ + L+ L KL L N H+ + TL ++L+HN+
Sbjct: 564 EVLNVENNRINDTFPFWLSSLKKLQVLVLRSNAFHGPIHHA--SFHTLRIINLSHNQ 618
Score = 126 (49.4 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 64/226 (28%), Positives = 95/226 (42%)
Query: 170 LDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMT---LSQDCLAPLVT---LRVLRL 223
+ LD+S+N++ L L F+DLS N + T S + L+T ++ L
Sbjct: 415 MTNLDISNNKIKGQVPGWLWTLPKLIFVDLS-NNIFTGFERSTEHGLSLITKPSMQYLVG 473
Query: 224 QGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRG 283
N T + + + LRS+ LDLS N L G + P S+L L++ N+ G
Sbjct: 474 SNNNFTGKIPSFICALRSLITLDLSDNNLNGSIPPCMGNLKSTLSFLNLRQNRLGG---G 530
Query: 284 ALAGLDK-LTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTL 342
+ K L SL HNQ+ SF LS L L++ +NRI L+ L L L
Sbjct: 531 LPRSIFKSLRSLDVGHNQLVGKLPRSFIRLSALEVLNVENNRINDTFPFWLSSLKKLQVL 590
Query: 343 DLSHNFLRALTQDLITPLKSLQELRLDDNDISME-PECIYVGFNTM 387
L N +L+ + L N S P +V +N M
Sbjct: 591 VLRSNAFHGPIHH--ASFHTLRIINLSHNQFSGTLPANYFVNWNAM 634
Score = 50 (22.7 bits), Expect = 9.8e-14, Sum P(2) = 9.8e-14
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 643 LLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
LL L VL+++ N F+ ++ L +L SL N++
Sbjct: 698 LLKELHVLNLSSNAFTGHIPSSMGNLRELESLDVSQNKL 736
Score = 45 (20.9 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 6/13 (46%), Positives = 13/13 (100%)
Query: 646 SLKVLSIAHNQFS 658
+L++++++HNQFS
Sbjct: 608 TLRIINLSHNQFS 620
Score = 45 (20.9 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 643 LLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID 682
+ SL+ L + HNQ + L L L+ +N+I+
Sbjct: 535 IFKSLRSLDVGHNQLVGKLPRSFIRLSALEVLNVENNRIN 574
Score = 44 (20.5 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
L L+ L ++ N+ S L L L ++ HNQ+
Sbjct: 723 LRELESLDVSQNKLSGEIPQELGNLSYLAYMNFSHNQL 760
>UNIPROTKB|F1PGX0 [details] [associations]
symbol:LINGO1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048715 "negative regulation of
oligodendrocyte differentiation" evidence=IEA] [GO:0043491 "protein
kinase B signaling cascade" evidence=IEA] [GO:0031175 "neuron
projection development" evidence=IEA] [GO:0021954 "central nervous
system neuron development" evidence=IEA] [GO:0005154 "epidermal
growth factor receptor binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0043491
GO:GO:0031175 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0021954 GO:GO:0048715
GeneTree:ENSGT00690000101682 OMA:RIRDRKP EMBL:AAEX03016347
ProteinModelPortal:F1PGX0 Ensembl:ENSCAFT00000028688 Uniprot:F1PGX0
Length = 620
Score = 206 (77.6 bits), Expect = 3.7e-13, P = 3.7e-13
Identities = 76/276 (27%), Positives = 129/276 (46%)
Query: 109 VLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAP 168
V PG F +L L + S LK I G F GLS+ L L + N + ++ L
Sbjct: 110 VEPGAFNNLFSLRTLGLRSNRLKLIPLGVFTGLSN-LTKLDISENKIVILLDYMFQDLY- 167
Query: 169 NLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRL 228
NL L++ N L + + +F GL+SL L L L ++ + L+ L +L VLRL+ L
Sbjct: 168 NLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHSLIVLRLR--HL 225
Query: 229 TVSVVA--ALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALA 286
++ + + + L + L++SH + P+ + L+ L LSI H ++V A+
Sbjct: 226 NINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLN-LTSLSITHCNLTAVPYLAVR 284
Query: 287 GLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSH 346
L L L+ +N I +E L L + L ++ V + L+ L L++S
Sbjct: 285 HLVYLRFLNLSYNPIGTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSG 344
Query: 347 NFLRALTQDLITPLKSLQELRLDDNDISMEPECIYV 382
N L L + + +L+ L LD N ++ + ++V
Sbjct: 345 NQLTTLEESAFHSVGNLETLILDSNPLACDCRLLWV 380
Score = 202 (76.2 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 75/274 (27%), Positives = 124/274 (45%)
Query: 116 EGVTLHGLVISSGE--LKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRL 173
EG+ ++ G+ +K ++ F L+ L L N++S V A L +L L
Sbjct: 67 EGIPTETRLLDLGKNRIKTLNQDEFASFPH-LEELELNENIVSAVEPGAFNNLF-SLRTL 124
Query: 174 DLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVV 233
L N+L + F GLS+L LD+S NK++ L L L+ L + N L
Sbjct: 125 GLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISH 184
Query: 234 AALQGLRSVTDLDLSH-NLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLT 292
A GL S+ L L NL + P + L SL VL + H +++R + L +L
Sbjct: 185 RAFSGLNSLEQLTLEKCNLTSIPT--EALSHLHSLIVLRLRHLNINAIRDYSFKRLYRLK 242
Query: 293 SLSCHH-NQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRA 351
L H +D + + L+ L+ L + H + AV ++ HL L L+LS+N +
Sbjct: 243 VLEISHWPYLDTMTPNCLYGLN-LTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIGT 301
Query: 352 LTQDLITPLKSLQELRLDDNDISMEPECIYVGFN 385
+ ++ L LQE++L +++ + G N
Sbjct: 302 IEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLN 335
Score = 183 (69.5 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 62/254 (24%), Positives = 117/254 (46%)
Query: 140 GLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDL 199
G+ + + L L N + + A P+L+ L+L+ N + +E +F L SL L L
Sbjct: 68 GIPTETRLLDLGKNRIKTLNQDEFASF-PHLEELELNENIVSAVEPGAFNNLFSLRTLGL 126
Query: 200 SYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPS 259
N+L + L L L + N++ + + Q L ++ L++ N L +
Sbjct: 127 RSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVY-ISHR 185
Query: 260 TVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 319
L+SL+ L++ +S+ AL+ L L L H I+ + D+SF+ L L L+
Sbjct: 186 AFSGLNSLEQLTLEKCNLTSIPTEALSHLHSLIVLRLRHLNINAIRDYSFKRLYRLKVLE 245
Query: 320 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI-SMEPE 378
++H + + + NLT+L ++H L A+ + L L+ L L N I ++E
Sbjct: 246 ISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIGTIEGS 305
Query: 379 CIYVGFNTMDLELI 392
++ +++L+
Sbjct: 306 MLHELLRLQEIQLV 319
Score = 179 (68.1 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 68/226 (30%), Positives = 111/226 (49%)
Query: 100 LDCTLSNVTVLPGKFLEGV-TLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVV 158
LD + + + +L + + L L + +L IS AF GL+S L+ L L L+ +
Sbjct: 148 LDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNS-LEQLTLEKCNLTSI 206
Query: 159 PTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSY-NKLMTLSQDCLAPLVT 217
PT AL+ L +L L L H + + + SFK L L L++S+ L T++ +CL L
Sbjct: 207 PTEALSHLH-SLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGL-N 264
Query: 218 LRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQF 277
L L + LT A++ L + L+LS+N + G + S + L L+ + + Q
Sbjct: 265 LTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPI-GTIEGSMLHELLRLQEIQLVGGQL 323
Query: 278 SSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 323
+ V A GL+ L L+ NQ+ LE+ +F ++ L L L N
Sbjct: 324 AVVEPYAFRGLNYLRVLNVSGNQLTTLEESAFHSVGNLETLILDSN 369
Score = 134 (52.2 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 34/131 (25%), Positives = 61/131 (46%)
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 317
P +P + ++L + N+ ++ + A L L + N + +E +F L +L
Sbjct: 66 PEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFSLRT 123
Query: 318 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEP 377
L L NR+ + LSNLT LD+S N + L + L +L+ L + DND+
Sbjct: 124 LGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYIS 183
Query: 378 ECIYVGFNTMD 388
+ G N+++
Sbjct: 184 HRAFSGLNSLE 194
Score = 130 (50.8 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 61/214 (28%), Positives = 100/214 (46%)
Query: 67 DLPHTLRCTANKSDLYAISE-SLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVI 125
DL + +DL IS + GL E+++L C N+T +P + L LH L++
Sbjct: 165 DLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKC---NLTSIPTEALSH--LHSLIV 219
Query: 126 SSGELKNIS---DGAFIGLSSPLQALGLPN-NLLSVVPTSALAPLAPNLDRLDLSHNQLY 181
NI+ D +F L L+ L + + L + + L L NL L ++H L
Sbjct: 220 LRLRHLNINAIRDYSFKRLYR-LKVLEISHWPYLDTMTPNCLYGL--NLTSLSITHCNLT 276
Query: 182 KLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRS 241
+ + + L L FL+LSYN + T+ L L+ L+ ++L G +L V A +GL
Sbjct: 277 AVPYLAVRHLVYLRFLNLSYNPIGTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNY 336
Query: 242 VTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHN 275
+ L++S N L L S + +L+ L + N
Sbjct: 337 LRVLNVSGNQLT-TLEESAFHSVGNLETLILDSN 369
Score = 56 (24.8 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L+ + + Q + V A GL+ L L+ NQ+ LE+ +F +V
Sbjct: 310 LLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESAFHSV 358
Score = 46 (21.3 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 10/38 (26%), Positives = 21/38 (55%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
L+ L+VL+++ NQ +++ A + L +L N +
Sbjct: 334 LNYLRVLNVSGNQLTTLEESAFHSVGNLETLILDSNPL 371
Score = 39 (18.8 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 646 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLE 685
+L LSI H ++V A+ L L L+ +N I +E
Sbjct: 264 NLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIGTIE 303
>ZFIN|ZDB-GENE-080723-57 [details] [associations]
symbol:lingo2 "leucine rich repeat and Ig domain
containing 2" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-080723-57 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101682 HOVERGEN:HBG057546 CTD:158038
EMBL:CR788317 IPI:IPI00911397 RefSeq:NP_001139054.1
UniGene:Dr.111487 Ensembl:ENSDART00000102279 GeneID:564052
KEGG:dre:564052 OMA:STAMGCL NextBio:20885199 Uniprot:B8JIN1
Length = 607
Score = 211 (79.3 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 91/304 (29%), Positives = 134/304 (44%)
Query: 116 EGVTLH--GLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVV-PTSALAPLAPNLDR 172
EG+ + L +S L+ ++ F L L+ L L NNLLS V P S A P L
Sbjct: 52 EGIPIETRSLDLSKNRLRIVTPQNFSSLLL-LEELDLSNNLLSSVEPNSFRAQ--PRLRS 108
Query: 173 LDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSV 232
L L NQL L + GLS L LD+S N+L+ L LRVL L N L
Sbjct: 109 LRLRSNQLTLLPRGALAGLSELTLLDVSQNRLVILLDYGFEEQRRLRVLELSDNELVFIA 168
Query: 233 VAALQGLRSVTDLDLSH-NLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKL 291
A GL S+ L L NL P + L L L + + ++ GL +L
Sbjct: 169 PRAFSGLASLRSLTLQRCNLSTVPT--HALAHLHGLTSLRLRDLGIAELQAHTFKGLPRL 226
Query: 292 TSLSCHHNQIDVLEDHSFRALS--TLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFL 349
L ++ +LE AL LS L + H + +V + +L LT L+LS++ +
Sbjct: 227 KHLEV--DRWPLLEGFPTSALQGLNLSTLSITHTNLTSVP--VVTNLLYLTHLNLSYSRI 282
Query: 350 RALTQDLITPLKSLQELRLDD-NDISMEPECIYVGFNTMDLELIYSGVWRHSTLLIPVML 408
R L + + L+ LR+ N +S+EP+ + L+L Y+ + + PV
Sbjct: 283 RVLPAGWLRGMDRLEVLRVRQANLLSVEPQAFQGASSLRILDLCYNRLATLERSVFPVTE 342
Query: 409 SLCT 412
+L T
Sbjct: 343 ALQT 346
Score = 188 (71.2 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 84/293 (28%), Positives = 129/293 (44%)
Query: 88 LRGLEPDERVSLL---DCTLSN---VTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGL 141
LR + P SLL + LSN +V P F L L + S +L + GA GL
Sbjct: 68 LRIVTPQNFSSLLLLEELDLSNNLLSSVEPNSFRAQPRLRSLRLRSNQLTLLPRGALAGL 127
Query: 142 SSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSY 201
S L L + N L ++ L L+LS N+L + +F GL+SL L L
Sbjct: 128 SE-LTLLDVSQNRLVILLDYGFEEQR-RLRVLELSDNELVFIAPRAFSGLASLRSLTLQR 185
Query: 202 NKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSH-NLLAGPLGPST 260
L T+ LA L L LRL+ + +GL + L++ LL G P++
Sbjct: 186 CNLSTVPTHALAHLHGLTSLRLRDLGIAELQAHTFKGLPRLKHLEVDRWPLLEG--FPTS 243
Query: 261 VPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 320
+ +L LSI H +SV + L LT L+ +++I VL R + L L +
Sbjct: 244 ALQGLNLSTLSITHTNLTSVP--VVTNLLYLTHLNLSYSRIRVLPAGWLRGMDRLEVLRV 301
Query: 321 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 373
+++V + S+L LDL +N L L + + ++LQ L + N +
Sbjct: 302 RQANLLSVEPQAFQGASSLRILDLCYNRLATLERSVFPVTEALQTLLIGQNPL 354
Score = 46 (21.3 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 9/37 (24%), Positives = 20/37 (54%)
Query: 645 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
SSL++L + +N+ +++ R + L +L N +
Sbjct: 318 SSLRILDLCYNRLATLERSVFPVTEALQTLLIGQNPL 354
>UNIPROTKB|F1NKM7 [details] [associations]
symbol:LGR6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591
SMART:SM00369 GO:GO:0016500 GeneTree:ENSGT00650000092962
OMA:AYGKAPS EMBL:AADN02063998 EMBL:AADN02063999 IPI:IPI00591161
ProteinModelPortal:F1NKM7 Ensembl:ENSGALT00000000792 Uniprot:F1NKM7
Length = 811
Score = 212 (79.7 bits), Expect = 5.4e-13, Sum P(2) = 5.4e-13
Identities = 88/317 (27%), Positives = 139/317 (43%)
Query: 67 DLPH--TLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGV-TLHGL 123
DLP+ +LR AN + ES GL+ + L D L T +P + L + L +
Sbjct: 41 DLPNLQSLRLDANLISVVP-EESFEGLQSLRHLWLDDNAL---TEIPVRALNRLPALQAM 96
Query: 124 VISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKL 183
++ ++ I D AF LSS L L L NN + + + L NL+ LDL++N+L +
Sbjct: 97 TLALNQIWRIPDYAFQNLSS-LVVLHLHNNRIQRLGANGFDGLH-NLETLDLNYNELLEF 154
Query: 184 ENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVT 243
+ + L L L N + + ++ L+ + N + +A Q L +
Sbjct: 155 PG-AIRTLGRLQELGFHNNNIKAIPENAFVGNPLLQTIHFYDNPIQFVGQSAFQYLPKLH 213
Query: 244 DLDLSHNLLAGPLGPSTVPRL---SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQ 300
L L+ G P L +SL+VL++ + R L L L HN+
Sbjct: 214 TLSLN-----GATDIREFPDLKGTTSLEVLTLTRAGIRLLPRAVCQQLPNLRVLELSHNK 268
Query: 301 IDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPL 360
I+ L SF L L L HNRI + + L+ L ++DLS N + + D L
Sbjct: 269 IEDLP--SFHRCQRLEELGLQHNRIHEIRADTFVQLTALRSIDLSWNDIHFIHPDAFVTL 326
Query: 361 KSLQELRLDDNDISMEP 377
+SL +L L DN ++ P
Sbjct: 327 RSLTKLDLSDNRLAALP 343
Score = 211 (79.3 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 61/199 (30%), Positives = 96/199 (48%)
Query: 175 LSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVA 234
LS NQ+ + +F GL SL L L N+L + + L L L+ LRL N ++V
Sbjct: 2 LSGNQISSIPGEAFSGLYSLKILMLQNNQLSRIPAEALRDLPNLQSLRLDANLISVVPEE 61
Query: 235 ALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSL 294
+ +GL+S+ L L N L + + RL +L+ +++A NQ + A L L L
Sbjct: 62 SFEGLQSLRHLWLDDNALT-EIPVRALNRLPALQAMTLALNQIWRIPDYAFQNLSSLVVL 120
Query: 295 SCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQ 354
H+N+I L + F L L LDL +N ++ GA + L L L +N ++A+ +
Sbjct: 121 HLHNNRIQRLGANGFDGLHNLETLDLNYNELLEFPGA-IRTLGRLQELGFHNNNIKAIPE 179
Query: 355 DLITPLKSLQELRLDDNDI 373
+ LQ + DN I
Sbjct: 180 NAFVGNPLLQTIHFYDNPI 198
Score = 209 (78.6 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 71/221 (32%), Positives = 104/221 (47%)
Query: 125 ISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLE 184
+S ++ +I AF GL S L+ L L NN LS +P AL L PNL L L N + +
Sbjct: 2 LSGNQISSIPGEAFSGLYS-LKILMLQNNQLSRIPAEALRDL-PNLQSLRLDANLISVVP 59
Query: 185 NTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTD 244
SF+GL SL L L N L + L L L+ + L N++ A Q L S+
Sbjct: 60 EESFEGLQSLRHLWLDDNALTEIPVRALNRLPALQAMTLALNQIWRIPDYAFQNLSSLVV 119
Query: 245 LDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL 304
L L HN LG + L +L+ L + +N+ GA+ L +L L H+N I +
Sbjct: 120 LHL-HNNRIQRLGANGFDGLHNLETLDLNYNELLEFP-GAIRTLGRLQELGFHNNNIKAI 177
Query: 305 EDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLS 345
+++F L + N I V ++ +L L TL L+
Sbjct: 178 PENAFVGNPLLQTIHFYDNPIQFVGQSAFQYLPKLHTLSLN 218
Score = 192 (72.6 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 60/185 (32%), Positives = 98/185 (52%)
Query: 199 LSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGP 258
LS N++ ++ + + L +L++L LQ N+L+ AL+ L ++ L L NL++ +
Sbjct: 2 LSGNQISSIPGEAFSGLYSLKILMLQNNQLSRIPAEALRDLPNLQSLRLDANLIS-VVPE 60
Query: 259 STVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHL 318
+ L SL+ L + N + + AL L L +++ NQI + D++F+ LS+L L
Sbjct: 61 ESFEGLQSLRHLWLDDNALTEIPVRALNRLPALQAMTLALNQIWRIPDYAFQNLSSLVVL 120
Query: 319 DLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPE 378
L +NRI + L NL TLDL++N L + T L LQEL +N+I PE
Sbjct: 121 HLHNNRIQRLGANGFDGLHNLETLDLNYNELLEFPGAIRT-LGRLQELGFHNNNIKAIPE 179
Query: 379 CIYVG 383
+VG
Sbjct: 180 NAFVG 184
Score = 157 (60.3 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 59/203 (29%), Positives = 91/203 (44%)
Query: 145 LQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKL 204
LQ LG NN + +P +A P L + N + + ++F+ L L+ L L+
Sbjct: 164 LQELGFHNNNIKAIPENAFVG-NPLLQTIHFYDNPIQFVGQSAFQYLPKLHTLSLNGATD 222
Query: 205 MTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRL 264
+ D L +L VL L + + A Q L ++ L+LSHN + PS R
Sbjct: 223 IREFPD-LKGTTSLEVLTLTRAGIRLLPRAVCQQLPNLRVLELSHNKIEDL--PS-FHRC 278
Query: 265 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 324
L+ L + HN+ +R L L S+ N I + +F L +L+ LDL+ NR
Sbjct: 279 QRLEELGLQHNRIHEIRADTFVQLTALRSIDLSWNDIHFIHPDAFVTLRSLTKLDLSDNR 338
Query: 325 IVAVSGASLAHLSNLTTLDLSHN 347
+ A+ L L +LT L L N
Sbjct: 339 LAALP---LGGLGSLTHLKLQGN 358
Score = 127 (49.8 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 41/132 (31%), Positives = 62/132 (46%)
Query: 264 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 323
L SLK+L + +NQ S + AL L L SL N I V+ + SF L +L HL L N
Sbjct: 18 LYSLKILMLQNNQLSRIPAEALRDLPNLQSLRLDANLISVVPEESFEGLQSLRHLWLDDN 77
Query: 324 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVG 383
+ + +L L L + L+ N + + L SL L L +N I + G
Sbjct: 78 ALTEIPVRALNRLPALQAMTLALNQIWRIPDYAFQNLSSLVVLHLHNNRIQRLGANGFDG 137
Query: 384 FNTMD-LELIYS 394
+ ++ L+L Y+
Sbjct: 138 LHNLETLDLNYN 149
Score = 57 (25.1 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 13/46 (28%), Positives = 25/46 (54%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
L +L+ L + +N+ GA+ L +L L H+N I + +++F
Sbjct: 138 LHNLETLDLNYNELLEFP-GAIRTLGRLQELGFHNNNIKAIPENAF 182
Score = 50 (22.7 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 12/46 (26%), Positives = 23/46 (50%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
L +L+VL ++HN+ + + +L L HN+I + +F
Sbjct: 256 LPNLRVLELSHNKIEDLP--SFHRCQRLEELGLQHNRIHEIRADTF 299
Score = 48 (22.0 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 11/43 (25%), Positives = 18/43 (41%)
Query: 647 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
L+ L + HN+ +R L L S+ N I + +F
Sbjct: 281 LEELGLQHNRIHEIRADTFVQLTALRSIDLSWNDIHFIHPDAF 323
Score = 42 (19.8 bits), Expect = 5.4e-13, Sum P(2) = 5.4e-13
Identities = 12/40 (30%), Positives = 25/40 (62%)
Query: 641 TILLSSLKVLSI--AHNQFSSVRR--GALAGLDKLTSLSC 676
++L + L VL++ + + S V+ G++AG + L+ +SC
Sbjct: 480 SVLCNGLVVLAVFASPSYLSPVKFVVGSIAGANTLSGVSC 519
Score = 42 (19.8 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 645 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL 684
+SL+VL++ + R L L L HN+I+ L
Sbjct: 233 TSLEVLTLTRAGIRLLPRAVCQQLPNLRVLELSHNKIEDL 272
>TAIR|locus:2098267 [details] [associations]
symbol:IMK2 "inflorescence meristem receptor-like kinase
2" species:3702 "Arabidopsis thaliana" [GO:0004672 "protein kinase
activity" evidence=IEA;NAS] [GO:0004674 "protein serine/threonine
kinase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005886 "plasma membrane" evidence=ISM;IDA]
[GO:0006468 "protein phosphorylation" evidence=IEA;ISS] [GO:0007169
"transmembrane receptor protein tyrosine kinase signaling pathway"
evidence=ISS] [GO:0016020 "membrane" evidence=NAS] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0009505 "plant-type cell
wall" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
[GO:0008283 "cell proliferation" evidence=RCA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000719 InterPro:IPR011009
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
GO:GO:0016021 GO:GO:0005886 GO:GO:0009506 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR eggNOG:COG0515
SUPFAM:SSF56112 GO:GO:0004672 GO:GO:0009505 InterPro:IPR013210
Pfam:PF08263 HSSP:P58822 HOGENOM:HOG000116554 EMBL:AL132968
EMBL:AF372978 EMBL:AY054515 EMBL:BT006350 EMBL:FJ708739
IPI:IPI00530691 PIR:T46070 RefSeq:NP_190742.1 UniGene:At.669
ProteinModelPortal:Q9SCT4 SMR:Q9SCT4 STRING:Q9SCT4 PaxDb:Q9SCT4
PRIDE:Q9SCT4 EnsemblPlants:AT3G51740.1 GeneID:824337
KEGG:ath:AT3G51740 GeneFarm:540 TAIR:At3g51740 InParanoid:Q9SCT4
OMA:HARAPDS PhylomeDB:Q9SCT4 ProtClustDB:CLSN2915461 Uniprot:Q9SCT4
Length = 836
Score = 214 (80.4 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 83/263 (31%), Positives = 127/263 (48%)
Query: 115 LEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLS-VVPTSALAPLAPNLDRL 173
L ++LH VI+ +++ G L+ + L NN LS +P S L P L L
Sbjct: 120 LRKLSLHNNVIAGSVPRSL------GYLKSLRGVYLFNNRLSGSIPVS-LGN-CPLLQNL 171
Query: 174 DLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVV 233
DLS NQL S + L L+LS+N L +A TL L LQ N L+ S+
Sbjct: 172 DLSSNQLTGAIPPSLTESTRLYRLNLSFNSLSGPLPVSVARSYTLTFLDLQHNNLSGSIP 231
Query: 234 AA-LQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFS-SVRRGALAGLDKL 291
+ G + L+L HN +G + P ++ + S L+ +SI+HNQ S S+ R GL L
Sbjct: 232 DFFVNGSHPLKTLNLDHNRFSGAV-PVSLCKHSLLEEVSISHNQLSGSIPREC-GGLPHL 289
Query: 292 TSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRA 351
SL +N I+ SF LS+L L+L N + ++ L NLT L+L N +
Sbjct: 290 QSLDFSYNSINGTIPDSFSNLSSLVSLNLESNHLKGPIPDAIDRLHNLTELNLKRNKING 349
Query: 352 LTQDLITPLKSLQELRLDDNDIS 374
+ I + +++L L +N+ +
Sbjct: 350 PIPETIGNISGIKKLDLSENNFT 372
Score = 205 (77.2 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 81/255 (31%), Positives = 115/255 (45%)
Query: 139 IGLSSPLQALGLPNNLLS-VVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFL 197
IG L+ L L NN+++ VP S L L +L + L +N+L S L L
Sbjct: 114 IGQLGSLRKLSLHNNVIAGSVPRS-LGYLK-SLRGVYLFNNRLSGSIPVSLGNCPLLQNL 171
Query: 198 DLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLG 257
DLS N+L L L L L N L+ + ++ ++T LDL HN L+G +
Sbjct: 172 DLSSNQLTGAIPPSLTESTRLYRLNLSFNSLSGPLPVSVARSYTLTFLDLQHNNLSGSIP 231
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 317
V LK L++ HN+FS +L L +S HNQ+ L L
Sbjct: 232 DFFVNGSHPLKTLNLDHNRFSGAVPVSLCKHSLLEEVSISHNQLSGSIPRECGGLPHLQS 291
Query: 318 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISME- 376
LD ++N I S ++LS+L +L+L N L+ D I L +L EL L N I+
Sbjct: 292 LDFSYNSINGTIPDSFSNLSSLVSLNLESNHLKGPIPDAIDRLHNLTELNLKRNKINGPI 351
Query: 377 PECI--YVGFNTMDL 389
PE I G +DL
Sbjct: 352 PETIGNISGIKKLDL 366
Score = 200 (75.5 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 71/237 (29%), Positives = 107/237 (45%)
Query: 66 CDLPHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVI 125
C L L ++N+ AI SL R++L +LS LP TL L +
Sbjct: 165 CPLLQNLDLSSNQLT-GAIPPSLTESTRLYRLNLSFNSLSGP--LPVSVARSYTLTFLDL 221
Query: 126 SSGELKNISDGAFIGLSSPLQALGLPNNLLS-VVPTSALAPLAPNLDRLDLSHNQLYKLE 184
L F+ S PL+ L L +N S VP S L+ + +SHNQL
Sbjct: 222 QHNNLSGSIPDFFVNGSHPLKTLNLDHNRFSGAVPVSLCKHSL--LEEVSISHNQLSGSI 279
Query: 185 NTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTD 244
GL L LD SYN + D + L +L L L+ N L + A+ L ++T+
Sbjct: 280 PRECGGLPHLQSLDFSYNSINGTIPDSFSNLSSLVSLNLESNHLKGPIPDAIDRLHNLTE 339
Query: 245 LDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 301
L+L N + GP+ P T+ +S +K L ++ N F+ +L L KL+S + +N +
Sbjct: 340 LNLKRNKINGPI-PETIGNISGIKKLDLSENNFTGPIPLSLVHLAKLSSFNVSYNTL 395
Score = 172 (65.6 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 64/231 (27%), Positives = 100/231 (43%)
Query: 120 LHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQ 179
L L +SS +L + S+ L L L N LS P + L LDL HN
Sbjct: 168 LQNLDLSSNQLTGAIPPSLTE-STRLYRLNLSFNSLSG-PLPVSVARSYTLTFLDLQHNN 225
Query: 180 LY-KLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQG 238
L + + G L L+L +N+ L L + + N+L+ S+ G
Sbjct: 226 LSGSIPDFFVNGSHPLKTLNLDHNRFSGAVPVSLCKHSLLEEVSISHNQLSGSIPRECGG 285
Query: 239 LRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHH 298
L + LD S+N + G + P + LSSL L++ N A+ L LT L+
Sbjct: 286 LPHLQSLDFSYNSINGTI-PDSFSNLSSLVSLNLESNHLKGPIPDAIDRLHNLTELNLKR 344
Query: 299 NQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFL 349
N+I+ + +S + LDL+ N SL HL+ L++ ++S+N L
Sbjct: 345 NKINGPIPETIGNISGIKKLDLSENNFTGPIPLSLVHLAKLSSFNVSYNTL 395
Score = 136 (52.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 50/186 (26%), Positives = 85/186 (45%)
Query: 97 VSLLDCTLSNVT-VLPGKFLEGVTLHGLVISSGELKNISDGAFIGLS--SPLQALGLPNN 153
++ LD +N++ +P F+ G H L + + S + L S L+ + + +N
Sbjct: 216 LTFLDLQHNNLSGSIPDFFVNGS--HPLKTLNLDHNRFSGAVPVSLCKHSLLEEVSISHN 273
Query: 154 LLS-VVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCL 212
LS +P P+L LD S+N + SF LSSL L+L N L D +
Sbjct: 274 QLSGSIPRECGG--LPHLQSLDFSYNSINGTIPDSFSNLSSLVSLNLESNHLKGPIPDAI 331
Query: 213 APLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSI 272
L L L L+ N++ + + + + LDLS N GP+ P ++ L+ L ++
Sbjct: 332 DRLHNLTELNLKRNKINGPIPETIGNISGIKKLDLSENNFTGPI-PLSLVHLAKLSSFNV 390
Query: 273 AHNQFS 278
++N S
Sbjct: 391 SYNTLS 396
Score = 47 (21.6 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 11/38 (28%), Positives = 21/38 (55%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
+S +K L ++ N F+ +L L KL+S + +N +
Sbjct: 358 ISGIKKLDLSENNFTGPIPLSLVHLAKLSSFNVSYNTL 395
>TAIR|locus:2011339 [details] [associations]
symbol:AT1G35710 species:3702 "Arabidopsis thaliana"
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=ISS]
[GO:0004713 "protein tyrosine kinase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0006468 "protein phosphorylation"
evidence=IEA;ISS] [GO:0007169 "transmembrane receptor protein
tyrosine kinase signaling pathway" evidence=ISS] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0009814
"defense response, incompatible interaction" evidence=RCA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000719
InterPro:IPR008266 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00109 PROSITE:PS50011
PROSITE:PS51450 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 eggNOG:COG0515
SUPFAM:SSF56112 GO:GO:0004674 InterPro:IPR003591 SMART:SM00369
Gene3D:2.60.120.200 InterPro:IPR013320 GO:GO:0004713 EMBL:AC021198
HOGENOM:HOG000116551 InterPro:IPR013210 Pfam:PF08263 HSSP:P25146
EMBL:AK319165 EMBL:FJ708647 EMBL:AY042808 IPI:IPI00538994
IPI:IPI00954379 IPI:IPI00954382 PIR:B86479 RefSeq:NP_174809.1
UniGene:At.15433 UniGene:At.74997 ProteinModelPortal:Q9LP24
SMR:Q9LP24 STRING:Q9LP24 PaxDb:Q9LP24 PRIDE:Q9LP24
EnsemblPlants:AT1G35710.1 GeneID:840475 KEGG:ath:AT1G35710
GeneFarm:669 TAIR:At1g35710 InParanoid:Q9LP24 OMA:GNMESMT
PhylomeDB:Q9LP24 ProtClustDB:CLSN2914378 Uniprot:Q9LP24
Length = 1120
Score = 210 (79.0 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 64/206 (31%), Positives = 101/206 (49%)
Query: 167 APNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGN 226
+P L L +S+N + T ++ L LDLS N L + + L L LRL GN
Sbjct: 557 SPKLGALIMSNNNITGAIPTEIWNMTQLVELDLSTNNLFGELPEAIGNLTNLSRLRLNGN 616
Query: 227 RLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFS-SVRRGAL 285
+L+ V A L L ++ LDLS N + + P T L ++++ N+F S+ R L
Sbjct: 617 QLSGRVPAGLSFLTNLESLDLSSNNFSSEI-PQTFDSFLKLHDMNLSRNKFDGSIPR--L 673
Query: 286 AGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLS 345
+ L +LT L HNQ+D +L +L LDL+HN + + + + LT +D+S
Sbjct: 674 SKLTQLTQLDLSHNQLDGEIPSQLSSLQSLDKLDLSHNNLSGLIPTTFEGMIALTNVDIS 733
Query: 346 HNFLRALTQDLITPLKSLQELRLDDN 371
+N L D T K+ + L++N
Sbjct: 734 NNKLEGPLPDTPTFRKATADA-LEEN 758
Score = 199 (75.1 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 70/225 (31%), Positives = 104/225 (46%)
Query: 169 NLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRL 228
NL +DLS N L F LS L + DLS N L L L L VL L N L
Sbjct: 103 NLAYVDLSMNLLSGTIPPQFGNLSKLIYFDLSTNHLTGEISPSLGNLKNLTVLYLHQNYL 162
Query: 229 TVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGL 288
T + + L + S+TDL LS N L G + PS++ L +L VL + N + V L +
Sbjct: 163 TSVIPSELGNMESMTDLALSQNKLTGSI-PSSLGNLKNLMVLYLYENYLTGVIPPELGNM 221
Query: 289 DKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNF 348
+ +T L+ N++ + L L L L N + V + ++ ++T L LS N
Sbjct: 222 ESMTDLALSQNKLTGSIPSTLGNLKNLMVLYLYENYLTGVIPPEIGNMESMTNLALSQNK 281
Query: 349 LRALTQDLITPLKSLQELRLDDNDIS--MEPECIYVGFNTMDLEL 391
L + LK+L L L N ++ + P+ + + +DLEL
Sbjct: 282 LTGSIPSSLGNLKNLTLLSLFQNYLTGGIPPKLGNIE-SMIDLEL 325
Score = 197 (74.4 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 82/290 (28%), Positives = 124/290 (42%)
Query: 98 SLLDCTLSNVTVLPGKFLEGVTLHGLVISS-GELKNIS-----DGAFIGLSSP------- 144
S++ L N+ + L L G + SS G LKN+ + G+ P
Sbjct: 164 SVIPSELGNMESMTDLALSQNKLTGSIPSSLGNLKNLMVLYLYENYLTGVIPPELGNMES 223
Query: 145 LQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKL 204
+ L L N L+ S L L NL L L N L + + S+ L LS NKL
Sbjct: 224 MTDLALSQNKLTGSIPSTLGNLK-NLMVLYLYENYLTGVIPPEIGNMESMTNLALSQNKL 282
Query: 205 MTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRL 264
L L L +L L N LT + L + S+ DL+LS+N L G + PS++ L
Sbjct: 283 TGSIPSSLGNLKNLTLLSLFQNYLTGGIPPKLGNIESMIDLELSNNKLTGSI-PSSLGNL 341
Query: 265 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 324
+L +L + N + V L ++ + L ++N++ SF L L++L L N
Sbjct: 342 KNLTILYLYENYLTGVIPPELGNMESMIDLQLNNNKLTGSIPSSFGNLKNLTYLYLYLNY 401
Query: 325 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 374
+ V L ++ ++ LDLS N L D L+ L L N +S
Sbjct: 402 LTGVIPQELGNMESMINLDLSQNKLTGSVPDSFGNFTKLESLYLRVNHLS 451
Score = 184 (69.8 bits), Expect = 4.7e-12, Sum P(2) = 4.7e-12
Identities = 62/223 (27%), Positives = 110/223 (49%)
Query: 152 NNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDC 211
N L SV+P S L + D L LS N+L +S L +L L L N L +
Sbjct: 160 NYLTSVIP-SELGNMESMTD-LALSQNKLTGSIPSSLGNLKNLMVLYLYENYLTGVIPPE 217
Query: 212 LAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLS 271
L + ++ L L N+LT S+ + L L+++ L L N L G + P + + S+ L+
Sbjct: 218 LGNMESMTDLALSQNKLTGSIPSTLGNLKNLMVLYLYENYLTGVIPPE-IGNMESMTNLA 276
Query: 272 IAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGA 331
++ N+ + +L L LT LS N + + ++ L+L++N++ +
Sbjct: 277 LSQNKLTGSIPSSLGNLKNLTLLSLFQNYLTGGIPPKLGNIESMIDLELSNNKLTGSIPS 336
Query: 332 SLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 374
SL +L NLT L L N+L + + ++S+ +L+L++N ++
Sbjct: 337 SLGNLKNLTILYLYENYLTGVIPPELGNMESMIDLQLNNNKLT 379
Score = 184 (69.8 bits), Expect = 4.7e-12, Sum P(2) = 4.7e-12
Identities = 86/313 (27%), Positives = 127/313 (40%)
Query: 68 LPHTLRCTANKSDLYAISESLRGLEPDE---RVSLLDCTLSNVTVLPGKFLEGV-TLHGL 123
+P +L N LY L G+ P E S+ D LS L G + L L
Sbjct: 190 IPSSLGNLKNLMVLYLYENYLTGVIPPELGNMESMTDLALSQ-NKLTGSIPSTLGNLKNL 248
Query: 124 VISSGELKNISDGAF---IGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQL 180
++ +N G IG + L L N L+ S+L L NL L L N L
Sbjct: 249 MVLY-LYENYLTGVIPPEIGNMESMTNLALSQNKLTGSIPSSLGNLK-NLTLLSLFQNYL 306
Query: 181 YKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLR 240
+ S+ L+LS NKL L L L +L L N LT + L +
Sbjct: 307 TGGIPPKLGNIESMIDLELSNNKLTGSIPSSLGNLKNLTILYLYENYLTGVIPPELGNME 366
Query: 241 SVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQ 300
S+ DL L++N L G + PS+ L +L L + N + V L ++ + +L N+
Sbjct: 367 SMIDLQLNNNKLTGSI-PSSFGNLKNLTYLYLYLNYLTGVIPQELGNMESMINLDLSQNK 425
Query: 301 IDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPL 360
+ SF + L L L N + +A+ S+LTTL L N + +
Sbjct: 426 LTGSVPDSFGNFTKLESLYLRVNHLSGAIPPGVANSSHLTTLILDTNNFTGFFPETVCKG 485
Query: 361 KSLQELRLDDNDI 373
+ LQ + LD N +
Sbjct: 486 RKLQNISLDYNHL 498
Score = 176 (67.0 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 55/181 (30%), Positives = 84/181 (46%)
Query: 194 LNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLA 253
LNF+D S+NK L L + N +T ++ + + + +LDLS N L
Sbjct: 536 LNFIDFSHNKFHGEISSNWEKSPKLGALIMSNNNITGAIPTEIWNMTQLVELDLSTNNLF 595
Query: 254 GPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALS 313
G L P + L++L L + NQ S L+ L L SL N +F +
Sbjct: 596 GEL-PEAIGNLTNLSRLRLNGNQLSGRVPAGLSFLTNLESLDLSSNNFSSEIPQTFDSFL 654
Query: 314 TLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 373
L ++L+ N+ S L+ L+ LT LDLSHN L ++ L+SL +L L N++
Sbjct: 655 KLHDMNLSRNKFDG-SIPRLSKLTQLTQLDLSHNQLDGEIPSQLSSLQSLDKLDLSHNNL 713
Query: 374 S 374
S
Sbjct: 714 S 714
Score = 165 (63.1 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 54/206 (26%), Positives = 101/206 (49%)
Query: 168 PNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNR 227
P+L+ +D SHN+ + +++++ L L +S N + + + L L L N
Sbjct: 534 PDLNFIDFSHNKFHGEISSNWEKSPKLGALIMSNNNITGAIPTEIWNMTQLVELDLSTNN 593
Query: 228 LTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAG 287
L + A+ L +++ L L+ N L+G + P+ + L++L+ L ++ N FSS
Sbjct: 594 LFGELPEAIGNLTNLSRLRLNGNQLSGRV-PAGLSFLTNLESLDLSSNNFSSEIPQTFDS 652
Query: 288 LDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHN 347
KL ++ N+ D + L+ L+ LDL+HN++ + L+ L +L LDLSHN
Sbjct: 653 FLKLHDMNLSRNKFDGSIPRLSK-LTQLTQLDLSHNQLDGEIPSQLSSLQSLDKLDLSHN 711
Query: 348 FLRALTQDLITPLKSLQELRLDDNDI 373
L L + +L + + +N +
Sbjct: 712 NLSGLIPTTFEGMIALTNVDISNNKL 737
Score = 157 (60.3 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 50/207 (24%), Positives = 97/207 (46%)
Query: 169 NLDRLDLSHNQLY-KLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNR 227
+++ L+L++ + ++ F LS+L ++DLS N L L L L N
Sbjct: 78 SIEELNLTNTGIEGTFQDFPFISLSNLAYVDLSMNLLSGTIPPQFGNLSKLIYFDLSTNH 137
Query: 228 LTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAG 287
LT + +L L+++T L L N L + PS + + S+ L+++ N+ + +L
Sbjct: 138 LTGEISPSLGNLKNLTVLYLHQNYLTSVI-PSELGNMESMTDLALSQNKLTGSIPSSLGN 196
Query: 288 LDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHN 347
L L L + N + + + +++ L L+ N++ ++L +L NL L L N
Sbjct: 197 LKNLMVLYLYENYLTGVIPPELGNMESMTDLALSQNKLTGSIPSTLGNLKNLMVLYLYEN 256
Query: 348 FLRALTQDLITPLKSLQELRLDDNDIS 374
+L + I ++S+ L L N ++
Sbjct: 257 YLTGVIPPEIGNMESMTNLALSQNKLT 283
Score = 131 (51.2 bits), Expect = 0.00012, P = 0.00012
Identities = 85/328 (25%), Positives = 140/328 (42%)
Query: 67 DLPHTLRCTANKSDLYAISESLRGLEPD-----ERVSLLDCTLSNVTV-LPGKFLEGVTL 120
+LP + N S L L G P + LD + +N + +P F + L
Sbjct: 597 ELPEAIGNLTNLSRLRLNGNQLSGRVPAGLSFLTNLESLDLSSNNFSSEIPQTFDSFLKL 656
Query: 121 HGLVISSGELKNISDGAFIGLS--SPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHN 178
H + +S +N DG+ LS + L L L +N L S L+ L +LD+LDLSHN
Sbjct: 657 HDMNLS----RNKFDGSIPRLSKLTQLTQLDLSHNQLDGEIPSQLSSLQ-SLDKLDLSHN 711
Query: 179 QLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAAL-- 236
L L T+F+G+ +L +D+S NKL + L T R + + + +
Sbjct: 712 NLSGLIPTTFEGMIALTNVDISNNKL----EGPLPDTPTFRKATADALEENIGLCSNIPK 767
Query: 237 QGLRSVTDLDL---SHNLLAGPLGPSTVPRLSSLKVLSIAHNQFS-SVRRGALAGLDKLT 292
Q L+ +L + NL+ L VP L L +LSI N F+ +R+ L + T
Sbjct: 768 QRLKPCRELKKPKKNGNLVVWIL----VPILGVLVILSICANTFTYCIRKRKLQN-GRNT 822
Query: 293 SLSCHHNQIDVLEDHSFR---ALSTLSHLDLAHNRIVAVSGASLAHLSNL--TTLDLS-- 345
N D F+ + + + D H ++ G S + +NL T + +
Sbjct: 823 DPETGENMSIFSVDGKFKYQDIIESTNEFDPTH--LIGTGGYSKVYRANLQDTIIAVKRL 880
Query: 346 HNFLR------ALTQDLITPLKSLQELR 367
H+ + + Q+ + +K+L E+R
Sbjct: 881 HDTIDEEISKPVVKQEFLNEVKALTEIR 908
Score = 66 (28.3 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 19/70 (27%), Positives = 30/70 (42%)
Query: 624 DINRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDV 683
+++RN D +L L+ L L ++HNQ L+ L L L HN +
Sbjct: 660 NLSRNKFDGSIPRLSK----LTQLTQLDLSHNQLDGEIPSQLSSLQSLDKLDLSHNNLSG 715
Query: 684 LEDHSFSNVI 693
L +F +I
Sbjct: 716 LIPTTFEGMI 725
Score = 57 (25.1 bits), Expect = 9.6e-13, Sum P(2) = 9.6e-13
Identities = 15/59 (25%), Positives = 30/59 (50%)
Query: 624 DINRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID 682
D++ N D + Q ++ L SL L ++HN S + G+ LT++ +N+++
Sbjct: 683 DLSHNQLDGE-IPSQLSS--LQSLDKLDLSHNNLSGLIPTTFEGMIALTNVDISNNKLE 738
Score = 44 (20.5 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 11/49 (22%), Positives = 23/49 (46%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L +L +L + N + V L ++ + L ++N++ SF N+
Sbjct: 341 LKNLTILYLYENYLTGVIPPELGNMESMIDLQLNNNKLTGSIPSSFGNL 389
Score = 44 (20.5 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 14/56 (25%), Positives = 25/56 (44%)
Query: 627 RNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID 682
R N + ++ A L++L+ L ++ N FSS KL ++ N+ D
Sbjct: 612 RLNGNQLSGRVPAGLSFLTNLESLDLSSNNFSSEIPQTFDSFLKLHDMNLSRNKFD 667
>MGI|MGI:2389174 [details] [associations]
symbol:Lrrtm2 "leucine rich repeat transmembrane neuronal 2"
species:10090 "Mus musculus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=ISS] [GO:0030054 "cell junction"
evidence=IEA] [GO:0042043 "neurexin family protein binding"
evidence=ISO] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0050808 "synapse
organization" evidence=IGI;ISO] [GO:0060076 "excitatory synapse"
evidence=ISO] InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2389174
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0050808
InterPro:IPR000372 SMART:SM00013 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00700000104056 HOGENOM:HOG000290681
HOVERGEN:HBG052362 CTD:26045 OMA:IRQCSMI OrthoDB:EOG4PG60Z
EMBL:AY182027 EMBL:AK043173 EMBL:AK043784 EMBL:AK044705
EMBL:AK046818 EMBL:AK049920 EMBL:AK122278 IPI:IPI00313492
RefSeq:NP_821072.1 UniGene:Mm.39900 ProteinModelPortal:Q8BGA3
SMR:Q8BGA3 STRING:Q8BGA3 PhosphoSite:Q8BGA3 PaxDb:Q8BGA3
PRIDE:Q8BGA3 DNASU:107065 Ensembl:ENSMUST00000091636 GeneID:107065
KEGG:mmu:107065 UCSC:uc008ema.1 InParanoid:Q8BGA3 NextBio:358560
Bgee:Q8BGA3 CleanEx:MM_LRRTM2 Genevestigator:Q8BGA3
GermOnline:ENSMUSG00000071862 Uniprot:Q8BGA3
Length = 515
Score = 209 (78.6 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 88/323 (27%), Positives = 144/323 (44%)
Query: 148 LGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTL 207
L L +N ++ + A + L L L HNQ+ ++ +F+GL L L LS NK+ L
Sbjct: 66 LSLRHNHITALERDQFASFS-QLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYL 124
Query: 208 SQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVP-RL-- 264
L+ L+ L L N+L+ GLR + L L N L T+P RL
Sbjct: 125 PNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLR------TIPVRLFW 178
Query: 265 --SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 322
SL+ L ++ N+ S+ R AGL KL L HNQ+ + F LS+L L L
Sbjct: 179 DCRSLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQW 238
Query: 323 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYV 382
N+I ++ S L LDL+ N ++A+ + + +L+ L +D+N ++ I
Sbjct: 239 NKISNLTCGMDWTWSTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILN 298
Query: 383 GFNTMDLELIYSGVWRHSTLLIPVMLSLCT-RSSVVTRYRYCVVL-----IEGSNILDQS 436
++ + +W S P + +L + S R+ + ++ +G +ILD
Sbjct: 299 SLKSLTTVGLSGNLWECS----PRVCALASWLGSFQGRWEHSILCHSPDHTQGEDILDA- 353
Query: 437 ALVLGCSEILALVPTLTSQPLSY 459
V G L T+T+ +Y
Sbjct: 354 --VHGFQLCWNLSTTVTAMATTY 374
Score = 152 (58.6 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 54/197 (27%), Positives = 93/197 (47%)
Query: 105 SNVTVLPGK-FLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSAL 163
+ + LP F + + L L +S +L ++ F GL LQ L L +N L +P
Sbjct: 119 NKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRK-LQTLHLRSNSLRTIPVRLF 177
Query: 164 APLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRL 223
+L+ LDLS N+L L F GL L L L +N+L ++ L +L L L
Sbjct: 178 WDCR-SLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFL 236
Query: 224 QGNRLTVSVVAALQGLRSVTD-LDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRR 282
Q N+++ ++ + S + LDL+ N + + + + +LK+L + +N+ +S+
Sbjct: 237 QWNKIS-NLTCGMDWTWSTLEKLDLTGNEIKA-IDLTVFETMPNLKILLMDNNKLNSLDS 294
Query: 283 GALAGLDKLTSLSCHHN 299
L L LT++ N
Sbjct: 295 KILNSLKSLTTVGLSGN 311
>UNIPROTKB|Q96FE5 [details] [associations]
symbol:LINGO1 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 1" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005154 "epidermal growth factor receptor binding"
evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IEA] [GO:0031175 "neuron projection
development" evidence=IEA] [GO:0043491 "protein kinase B signaling
cascade" evidence=IEA] [GO:0048715 "negative regulation of
oligodendrocyte differentiation" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0048011 "neurotrophin TRK receptor
signaling pathway" evidence=TAS] [GO:0050770 "regulation of
axonogenesis" evidence=TAS] [GO:0050771 "negative regulation of
axonogenesis" evidence=TAS] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021
GO:GO:0005886 Reactome:REACT_111102 GO:GO:0048011 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
EMBL:CH471136 GO:GO:0043491 GO:GO:0031175 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 GO:GO:0050771
GO:GO:0021954 MEROPS:I43.001 GO:GO:0048715 Orphanet:862
OrthoDB:EOG40S0F8 CTD:84894 HOVERGEN:HBG057546 OMA:RIRDRKP
EMBL:AY324320 EMBL:AY324322 EMBL:AY324323 EMBL:AY358284
EMBL:AK027500 EMBL:AK291363 EMBL:BC011057 EMBL:BC068558
EMBL:AL834260 IPI:IPI00465325 IPI:IPI00795326 RefSeq:NP_116197.4
UniGene:Hs.656765 UniGene:Hs.736275 PDB:2ID5 PDBsum:2ID5
ProteinModelPortal:Q96FE5 SMR:Q96FE5 IntAct:Q96FE5
MINT:MINT-1378183 STRING:Q96FE5 PhosphoSite:Q96FE5 PaxDb:Q96FE5
PRIDE:Q96FE5 Ensembl:ENST00000355300 Ensembl:ENST00000561030
GeneID:84894 KEGG:hsa:84894 UCSC:uc002bct.1 GeneCards:GC15M077905
H-InvDB:HIX0012466 HGNC:HGNC:21205 HPA:HPA011630 MIM:609791
neXtProt:NX_Q96FE5 PharmGKB:PA162394087 InParanoid:Q96FE5
EvolutionaryTrace:Q96FE5 GenomeRNAi:84894 NextBio:75236 Bgee:Q96FE5
CleanEx:HS_LINGO1 Genevestigator:Q96FE5 Uniprot:Q96FE5
Length = 620
Score = 205 (77.2 bits), Expect = 4.8e-13, P = 4.8e-13
Identities = 76/276 (27%), Positives = 128/276 (46%)
Query: 109 VLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAP 168
V PG F L L + S LK I G F GLS+ L L + N + ++ L
Sbjct: 110 VEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSN-LTKLDISENKIVILLDYMFQDLY- 167
Query: 169 NLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRL 228
NL L++ N L + + +F GL+SL L L L ++ + L+ L L VLRL+ L
Sbjct: 168 NLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLR--HL 225
Query: 229 TVSVVA--ALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALA 286
++ + + + L + L++SH + P+ + L+ L LSI H ++V A+
Sbjct: 226 NINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLN-LTSLSITHCNLTAVPYLAVR 284
Query: 287 GLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSH 346
L L L+ +N I +E L L + L ++ V + L+ L L++S
Sbjct: 285 HLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSG 344
Query: 347 NFLRALTQDLITPLKSLQELRLDDNDISMEPECIYV 382
N L L + + + +L+ L LD N ++ + ++V
Sbjct: 345 NQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWV 380
Score = 204 (76.9 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 75/274 (27%), Positives = 123/274 (44%)
Query: 116 EGVTLHGLVISSGE--LKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRL 173
EG+ ++ G+ +K ++ F L+ L L N++S V A L NL L
Sbjct: 67 EGIPTETRLLDLGKNRIKTLNQDEFASFPH-LEELELNENIVSAVEPGAFNNLF-NLRTL 124
Query: 174 DLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVV 233
L N+L + F GLS+L LD+S NK++ L L L+ L + N L
Sbjct: 125 GLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISH 184
Query: 234 AALQGLRSVTDLDLSH-NLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLT 292
A GL S+ L L NL + P + L L VL + H +++R + L +L
Sbjct: 185 RAFSGLNSLEQLTLEKCNLTSIPT--EALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLK 242
Query: 293 SLSCHH-NQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRA 351
L H +D + + L+ L+ L + H + AV ++ HL L L+LS+N +
Sbjct: 243 VLEISHWPYLDTMTPNCLYGLN-LTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIST 301
Query: 352 LTQDLITPLKSLQELRLDDNDISMEPECIYVGFN 385
+ ++ L LQE++L +++ + G N
Sbjct: 302 IEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLN 335
Score = 181 (68.8 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 62/254 (24%), Positives = 117/254 (46%)
Query: 140 GLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDL 199
G+ + + L L N + + A P+L+ L+L+ N + +E +F L +L L L
Sbjct: 68 GIPTETRLLDLGKNRIKTLNQDEFASF-PHLEELELNENIVSAVEPGAFNNLFNLRTLGL 126
Query: 200 SYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPS 259
N+L + L L L + N++ + + Q L ++ L++ N L +
Sbjct: 127 RSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVY-ISHR 185
Query: 260 TVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 319
L+SL+ L++ +S+ AL+ L L L H I+ + D+SF+ L L L+
Sbjct: 186 AFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLE 245
Query: 320 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS-MEPE 378
++H + + + NLT+L ++H L A+ + L L+ L L N IS +E
Sbjct: 246 ISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGS 305
Query: 379 CIYVGFNTMDLELI 392
++ +++L+
Sbjct: 306 MLHELLRLQEIQLV 319
Score = 171 (65.3 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 68/226 (30%), Positives = 109/226 (48%)
Query: 100 LDCTLSNVTVLPGKFLEGV-TLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVV 158
LD + + + +L + + L L + +L IS AF GL+S L+ L L L+ +
Sbjct: 148 LDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNS-LEQLTLEKCNLTSI 206
Query: 159 PTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSY-NKLMTLSQDCLAPLVT 217
PT AL+ L L L L H + + + SFK L L L++S+ L T++ +CL L
Sbjct: 207 PTEALSHLH-GLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGL-N 264
Query: 218 LRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQF 277
L L + LT A++ L + L+LS+N ++ G S + L L+ + + Q
Sbjct: 265 LTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEG-SMLHELLRLQEIQLVGGQL 323
Query: 278 SSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 323
+ V A GL+ L L+ NQ+ LE+ F ++ L L L N
Sbjct: 324 AVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSN 369
Score = 138 (53.6 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 62/214 (28%), Positives = 101/214 (47%)
Query: 67 DLPHTLRCTANKSDLYAISE-SLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVI 125
DL + +DL IS + GL E+++L C N+T +P + L LHGL++
Sbjct: 165 DLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKC---NLTSIPTEALSH--LHGLIV 219
Query: 126 SSGELKNIS---DGAFIGLSSPLQALGLPN-NLLSVVPTSALAPLAPNLDRLDLSHNQLY 181
NI+ D +F L L+ L + + L + + L L NL L ++H L
Sbjct: 220 LRLRHLNINAIRDYSFKRLYR-LKVLEISHWPYLDTMTPNCLYGL--NLTSLSITHCNLT 276
Query: 182 KLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRS 241
+ + + L L FL+LSYN + T+ L L+ L+ ++L G +L V A +GL
Sbjct: 277 AVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNY 336
Query: 242 VTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHN 275
+ L++S N L L S + +L+ L + N
Sbjct: 337 LRVLNVSGNQLT-TLEESVFHSVGNLETLILDSN 369
Score = 133 (51.9 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 34/131 (25%), Positives = 60/131 (45%)
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 317
P +P + ++L + N+ ++ + A L L + N + +E +F L L
Sbjct: 66 PEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRT 123
Query: 318 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEP 377
L L NR+ + LSNLT LD+S N + L + L +L+ L + DND+
Sbjct: 124 LGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYIS 183
Query: 378 ECIYVGFNTMD 388
+ G N+++
Sbjct: 184 HRAFSGLNSLE 194
Score = 129 (50.5 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 41/146 (28%), Positives = 70/146 (47%)
Query: 233 VAALQGLRSVTDL-DLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKL 291
VA +G+ + T L DL N + L L+ L + N S+V GA L L
Sbjct: 63 VAVPEGIPTETRLLDLGKNRIK-TLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNL 121
Query: 292 TSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRA 351
+L N++ ++ F LS L+ LD++ N+IV + L NL +L++ N L
Sbjct: 122 RTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVY 181
Query: 352 LTQDLITPLKSLQELRLDDNDISMEP 377
++ + L SL++L L+ +++ P
Sbjct: 182 ISHRAFSGLNSLEQLTLEKCNLTSIP 207
Score = 53 (23.7 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L+ + + Q + V A GL+ L L+ NQ+ LE+ F +V
Sbjct: 310 LLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSV 358
Score = 42 (19.8 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 9/38 (23%), Positives = 20/38 (52%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
L+ L+VL+++ NQ +++ + L +L N +
Sbjct: 334 LNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPL 371
Score = 40 (19.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 646 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLE 685
+L LSI H ++V A+ L L L+ +N I +E
Sbjct: 264 NLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIE 303
>UNIPROTKB|Q5T0V0 [details] [associations]
symbol:SLIT1 "Slit homolog 1 protein" species:9606 "Homo
sapiens" [GO:0005509 "calcium ion binding" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 Pfam:PF02210
Pfam:PF12661 Pfam:PF01463 EMBL:AL442123 EMBL:AL512424
IPI:IPI00871419 UniGene:Hs.632082 HGNC:HGNC:11085
HOGENOM:HOG000116120 HOVERGEN:HBG057959 ChiTaRS:SLIT1 SMR:Q5T0V0
STRING:Q5T0V0 Ensembl:ENST00000371070 Uniprot:Q5T0V0
Length = 1461
Score = 159 (61.0 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 84/342 (24%), Positives = 142/342 (41%)
Query: 67 DLP-HTLRCTANKSDLYAISES-LRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLV 124
++P +T R N +++ I ++ GL+ + L++ + V G F + L L
Sbjct: 58 NIPRNTERLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVE--RGAFDDMKELERLR 115
Query: 125 ISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLE 184
++ +L + + F + L L L N + +P A A +L L L NQ+ +E
Sbjct: 116 LNRNQLHMLPELLFQN-NQALSRLDLSENAIQAIPRKAFRG-ATDLKNLQLDKNQISCIE 173
Query: 185 NTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSV-VAAL-QGLRSV 242
+F+ L L L L+ N + T+ + LR RL N L +A L Q LR
Sbjct: 174 EGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQR 233
Query: 243 TDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDK--LTSLSCH--- 297
+ L +GP L L V + ++FS +G + L+S SC
Sbjct: 234 PTIGL-FTQCSGPAS------LRGLNVAEVQKSEFSCSGQGEAGRVPTCTLSSGSCPAMC 286
Query: 298 --HNQIDVLEDHSFRAL-----STLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLR 350
N I A+ T++ + L N I ++ + + L +DLS+N +
Sbjct: 287 TCSNGIVDCRGKGLTAIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIA 346
Query: 351 ALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELI 392
+ D L+SL L L N I+ P ++ G T+ L L+
Sbjct: 347 EIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLL 388
Score = 153 (58.9 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 43/137 (31%), Positives = 70/137 (51%)
Query: 141 LSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLS 200
L + + L N + +P A +P L R+DLS+NQ+ ++ +F+GL SLN L L
Sbjct: 307 LPETMTEIRLELNGIKSIPPGAFSPYR-KLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLY 365
Query: 201 YNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPST 260
NK+ L + L TL++L L N++ A Q L++++ L L N + L T
Sbjct: 366 GNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQS-LAKGT 424
Query: 261 VPRLSSLKVLSIAHNQF 277
L +++ L +A N F
Sbjct: 425 FTSLRAIQTLHLAQNPF 441
Score = 146 (56.5 bits), Expect = 7.2e-13, Sum P(2) = 7.2e-13
Identities = 38/131 (29%), Positives = 72/131 (54%)
Query: 148 LGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTL 207
L L NN +S++ + + +L +++LS+N++ ++E+ +F+G +S++ L L+ N+L ++
Sbjct: 545 LRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESI 604
Query: 208 SQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSL 267
L LR L L+ NR++ + GLR+V L L N + + P L SL
Sbjct: 605 RSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIT-TVSPGAFDTLQSL 663
Query: 268 KVLSIAHNQFS 278
L++ N F+
Sbjct: 664 STLNLLANPFN 674
Score = 137 (53.3 bits), Expect = 4.1e-12, Sum P(2) = 4.1e-12
Identities = 52/174 (29%), Positives = 82/174 (47%)
Query: 61 NDLCACDL--PHTLRCTANKSDLYAISESLRGLEPDERV--SLLDCTLSN--VTVLP--G 112
N C D+ PH RC AN + SL+ + ER+ S + L+N +++L G
Sbjct: 504 NSECNSDVVCPHKCRCEANVVEC----SSLKLTKIPERIPQSTAELRLNNNEISILEATG 559
Query: 113 KFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDR 172
F + L + +S+ ++ I DGAF G +S + L L N L + + L L
Sbjct: 560 MFKKLTHLKKINLSNNKVSEIEDGAFEGAAS-VSELHLTANQLESIRSGMFRGL-DGLRT 617
Query: 173 LDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGN 226
L L +N++ + N SF GL ++ L L N++ T+S L +L L L N
Sbjct: 618 LMLRNNRISCIHNDSFTGLRNVRLLSLYDNQITTVSPGAFDTLQSLSTLNLLAN 671
Score = 135 (52.6 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 37/144 (25%), Positives = 68/144 (47%)
Query: 240 RSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 299
+S +L L++N ++ +L+ LK +++++N+ S + GA G ++ L N
Sbjct: 540 QSTAELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTAN 599
Query: 300 QIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITP 359
Q++ + FR L L L L +NRI + S L N+ L L N + ++
Sbjct: 600 QLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQITTVSPGAFDT 659
Query: 360 LKSLQELRLDDNDISMEPECIYVG 383
L+SL L L N + + ++G
Sbjct: 660 LQSLSTLNLLANPFNCNCQLAWLG 683
Score = 128 (50.1 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 46/168 (27%), Positives = 78/168 (46%)
Query: 206 TLSQDCLAPLVTLR--VLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPR 263
TLS + T ++ +G LT ++ A L ++T++ L N + + P
Sbjct: 276 TLSSGSCPAMCTCSNGIVDCRGKGLT-AIPANLP--ETMTEIRLELNGIKS-IPPGAFSP 331
Query: 264 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 323
L+ + +++NQ + + A GL L SL + N+I L F L TL L L N
Sbjct: 332 YRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNAN 391
Query: 324 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
+I + + L NL+ L L N +++L + T L+++Q L L N
Sbjct: 392 KINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQN 439
Score = 122 (48.0 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 86/348 (24%), Positives = 143/348 (41%)
Query: 60 KNDLCACDLPHTLRCTANKSDLYAISESLRGLEPD-ERVSLLDCTLSNVTVLPGK-FLEG 117
KND L+ N+ + A+ RG D + + L + + +LP F
Sbjct: 78 KNDFAGLKQLRVLQLMENQ--IGAVE---RGAFDDMKELERLRLNRNQLHMLPELLFQNN 132
Query: 118 VTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSH 177
L L +S ++ I AF G ++ L+ L L N +S + A L L+ L L++
Sbjct: 133 QALSRLDLSENAIQAIPRKAFRG-ATDLKNLQLDKNQISCIEEGAFRALR-GLEVLTLNN 190
Query: 178 NQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDC-LAPLVT-LRVLRLQGNRLTVSVVAA 235
N + + +SF + L L N L DC LA L LR G S A+
Sbjct: 191 NNITTIPVSSFNHMPKLRTFRLHSNHLFC---DCHLAWLSQWLRQRPTIGLFTQCSGPAS 247
Query: 236 LQGLRSVTDLDLSHNLLAGPLGPSTVPR--LSS--LKVLSIAHNQFSSVRRGALAGL--- 288
L+GL +V ++ S +G VP LSS + N R L +
Sbjct: 248 LRGL-NVAEVQKSEFSCSGQGEAGRVPTCTLSSGSCPAMCTCSNGIVDCRGKGLTAIPAN 306
Query: 289 --DKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSH 346
+ +T + N I + +F L +DL++N+I ++ + L +L +L L
Sbjct: 307 LPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYG 366
Query: 347 NFLRALTQDLITPLKSLQELRLDDNDIS-MEPECIYVGFNTMDLELIY 393
N + L + + L +LQ L L+ N I+ + P+ + + L +Y
Sbjct: 367 NKITDLPRGVFGGLYTLQLLLLNANKINCIRPDA-FQDLQNLSLLSLY 413
Score = 118 (46.6 bits), Expect = 4.1e-12, Sum P(2) = 4.1e-12
Identities = 33/103 (32%), Positives = 53/103 (51%)
Query: 221 LRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSV 280
L L GN+ T+ V L + + +DLS+N ++ L S+ +S L L +++N +
Sbjct: 766 LYLDGNQFTL-VPGQLSTFKYLQLVDLSNNKISS-LSNSSFTNMSQLTTLILSYNALQCI 823
Query: 281 RRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 323
A GL L LS H N I L++ F +++LSHL + N
Sbjct: 824 PPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAIGAN 866
Score = 118 (46.6 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 36/128 (28%), Positives = 59/128 (46%)
Query: 199 LSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGP 258
L N + ++ +P LR + L N++ A QGLRS+ L L N + L
Sbjct: 316 LELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITD-LPR 374
Query: 259 STVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHL 318
L +L++L + N+ + +R A L L+ LS + N+I L +F +L + L
Sbjct: 375 GVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTL 434
Query: 319 DLAHNRIV 326
LA N +
Sbjct: 435 HLAQNPFI 442
Score = 116 (45.9 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 36/105 (34%), Positives = 57/105 (54%)
Query: 287 GLDK-LTSLSCHHNQIDVLEDHSFRALSTLSHL---DLAHNRIVAVSGASLAHLSNLTTL 342
G+ K +T L NQ ++ LST +L DL++N+I ++S +S ++S LTTL
Sbjct: 758 GIPKNVTELYLDGNQFTLVPGQ----LSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTL 813
Query: 343 DLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTM 387
LS+N L+ + L+SL+ L L NDIS E I+ ++
Sbjct: 814 ILSYNALQCIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSL 858
Score = 97 (39.2 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 31/116 (26%), Positives = 53/116 (45%)
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 317
P+ +P ++ + + N S+ GA + KL + +NQI + +F+ L +L+
Sbjct: 304 PANLPE--TMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNS 361
Query: 318 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 373
L L N+I + L L L L+ N + + D L++L L L DN I
Sbjct: 362 LVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKI 417
Score = 95 (38.5 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 30/116 (25%), Positives = 55/116 (47%)
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 317
P +P+ ++ L + NQF+ V G L+ L + +N+I L + SF +S L+
Sbjct: 756 PKGIPK--NVTELYLDGNQFTLVP-GQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTT 812
Query: 318 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 373
L L++N + + + L +L L L N + L + + + SL L + N +
Sbjct: 813 LILSYNALQCIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAIGANPL 868
Score = 78 (32.5 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 645 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
+S+ L + NQ S+R G GLD L +L +N+I + + SF+ +
Sbjct: 589 ASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGL 636
Score = 71 (30.1 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 16/77 (20%), Positives = 37/77 (48%)
Query: 618 VAQQEDDINRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCH 677
+ Q ++ NN++ ++ L+ LK +++++N+ S + GA G ++ L
Sbjct: 538 IPQSTAELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLT 597
Query: 678 HNQIDVLEDHSFSNVIG 694
NQ++ + F + G
Sbjct: 598 ANQLESIRSGMFRGLDG 614
Score = 66 (28.3 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
+S L L +++N + A GL L LS H N I L++ F++V
Sbjct: 807 MSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADV 855
Score = 63 (27.2 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 20/75 (26%), Positives = 34/75 (45%)
Query: 315 LSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 374
++ L L N+ V G L+ L +DLS+N + +L+ T + L L L N +
Sbjct: 763 VTELYLDGNQFTLVPG-QLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQ 821
Query: 375 MEPECIYVGFNTMDL 389
P + G ++ L
Sbjct: 822 CIPPLAFQGLRSLRL 836
Score = 62 (26.9 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L+ L + +N+ S + + GL + LS + NQI + +F +
Sbjct: 612 LDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQITTVSPGAFDTL 660
Score = 57 (25.1 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L +L++L + N+ + +R A L L+ LS + N+I L +F+++
Sbjct: 380 LYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSL 428
Score = 54 (24.1 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L SL L + N+ + + RG GL L L + N+I+ + +F ++
Sbjct: 356 LRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDL 404
Score = 50 (22.7 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 11/32 (34%), Positives = 21/32 (65%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLS 675
L ++++LS+ NQ ++V GA L L++L+
Sbjct: 636 LRNVRLLSLYDNQITTVSPGAFDTLQSLSTLN 667
Score = 46 (21.3 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 655 NQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
NQF+ V G L+ L + +N+I L + SF+N+
Sbjct: 771 NQFTLVP-GQLSTFKYLQLVDLSNNKISSLSNSSFTNM 807
>UNIPROTKB|Q9BZR6 [details] [associations]
symbol:RTN4R "Reticulon-4 receptor" species:9606 "Homo
sapiens" [GO:0031225 "anchored to membrane" evidence=IEA]
[GO:0009986 "cell surface" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0004872 "receptor activity"
evidence=NAS] [GO:0016020 "membrane" evidence=NAS] [GO:0007409
"axonogenesis" evidence=NAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0048011 "neurotrophin TRK receptor signaling
pathway" evidence=TAS] [GO:0050770 "regulation of axonogenesis"
evidence=TAS] [GO:0050771 "negative regulation of axonogenesis"
evidence=TAS] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005783 GO:GO:0005886
Reactome:REACT_111102 GO:GO:0048011
Pathway_Interaction_DB:p75ntrpathway GO:GO:0009986 GO:GO:0031225
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0004872 GO:GO:0007409 EMBL:CH471176
InterPro:IPR000372 SMART:SM00013 GO:GO:0050771 HOGENOM:HOG000116109
HOVERGEN:HBG063707 EMBL:AF283463 EMBL:AL834449 EMBL:AY358297
EMBL:CR456360 EMBL:AC058790 EMBL:AC007663 EMBL:BC011787
IPI:IPI00289204 RefSeq:NP_075380.1 UniGene:Hs.30868 PDB:1OZN
PDB:1P8T PDBsum:1OZN PDBsum:1P8T ProteinModelPortal:Q9BZR6
SMR:Q9BZR6 IntAct:Q9BZR6 STRING:Q9BZR6 DMDM:25453267 PRIDE:Q9BZR6
DNASU:65078 Ensembl:ENST00000043402 GeneID:65078 KEGG:hsa:65078
UCSC:uc002zru.3 CTD:65078 GeneCards:GC22M020234 HGNC:HGNC:18601
HPA:CAB012443 MIM:605566 neXtProt:NX_Q9BZR6 PharmGKB:PA38600
InParanoid:Q9BZR6 KO:K16659 PhylomeDB:Q9BZR6
EvolutionaryTrace:Q9BZR6 GenomeRNAi:65078 NextBio:67268 Bgee:Q9BZR6
CleanEx:HS_RTN4R Genevestigator:Q9BZR6 GermOnline:ENSG00000040608
Uniprot:Q9BZR6
Length = 473
Score = 208 (78.3 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 73/237 (30%), Positives = 101/237 (42%)
Query: 136 GAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLN 195
GA + + P P L VP P A R+ L N++ + SF+ +L
Sbjct: 29 GACVCYNEPKVTTSCPQQGLQAVPVGI--PAASQ--RIFLHGNRISHVPAASFRACRNLT 84
Query: 196 FLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSV-VAALQGLRSVTDLDLSHNLLAG 254
L L N L + L L L L N SV A GL + L L L
Sbjct: 85 ILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQ- 143
Query: 255 PLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALST 314
LGP L++L+ L + N ++ L LT L H N+I + + +FR L +
Sbjct: 144 ELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHS 203
Query: 315 LSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
L L L NR+ V + L L TL L N L AL + + PL++LQ LRL+DN
Sbjct: 204 LDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 260
Score = 141 (54.7 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 50/160 (31%), Positives = 66/160 (41%)
Query: 218 LRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQF 277
L +L L N L AA GL + LDLS N + P+T L L L +
Sbjct: 83 LTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGL 142
Query: 278 SSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLS 337
+ G GL L L N + L D +FR L L+HL L NRI +V + L
Sbjct: 143 QELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLH 202
Query: 338 NLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEP 377
+L L L N + + L L L L N++S P
Sbjct: 203 SLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALP 242
Score = 104 (41.7 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 39/129 (30%), Positives = 59/129 (45%)
Query: 251 LLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFR 310
L A P+G +P S + + N+ S V + LT L H N + ++ +F
Sbjct: 48 LQAVPVG---IPAASQR--IFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFT 102
Query: 311 ALSTLSHLDLAHN-RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLD 369
L+ L LDL+ N ++ +V A+ L L TL L L+ L L L +LQ L L
Sbjct: 103 GLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQ 162
Query: 370 DNDISMEPE 378
DN + P+
Sbjct: 163 DNALQALPD 171
Score = 64 (27.6 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L +L L + N+ SSV A GL L L H N++ + H+F ++
Sbjct: 177 LGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDL 225
>ZFIN|ZDB-GENE-040310-1 [details] [associations]
symbol:rtn4r "reticulon 4 receptor" species:7955
"Danio rerio" [GO:0048936 "peripheral nervous system neuron
axonogenesis" evidence=IGI;IMP] [GO:0007411 "axon guidance"
evidence=IGI;IMP] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-040310-1 GO:GO:0007411 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 GO:GO:0048936 HOGENOM:HOG000116109 HOVERGEN:HBG063707
CTD:65078 EMBL:AY257178 IPI:IPI00490487 RefSeq:NP_982345.1
UniGene:Dr.30202 ProteinModelPortal:Q6X3Y5 SMR:Q6X3Y5 GeneID:403306
KEGG:dre:403306 InParanoid:Q6X3Y5 NextBio:20816915 Uniprot:Q6X3Y5
Length = 479
Score = 208 (78.3 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 73/231 (31%), Positives = 100/231 (43%)
Query: 142 SSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSY 201
S P + L +PT P+ R+ L N+L + +TSF + +L L +
Sbjct: 35 SEPKATVACQQQGLFSIPTEI--PVRSQ--RIFLQSNKLTVVRSTSFSSVHNLTVLWMYS 90
Query: 202 NKLMTLSQDCLAPLVTLRVLRLQGN-RLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPST 260
N + + L L L + N L + A +GL + L L H L
Sbjct: 91 NNISHIEAGAFYGLERLEELDIGDNSNLRIISPTAFRGLTKLHTLHL-HRCGLSELPVGV 149
Query: 261 VPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 320
L SL+ L + N ++ L LT L H+N+I V+ DH R L L L L
Sbjct: 150 FRGLFSLQYLYLQDNNLLALHEDTFLDLANLTYLFLHNNKIKVVTDHMLRGLVNLDRLLL 209
Query: 321 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
NRIV V + LS LTTL L N L LT + + PL SLQ LRL+ N
Sbjct: 210 HQNRIVHVQQQAFNDLSKLTTLFLFFNNLTMLTGESMNPLVSLQYLRLNGN 260
Score = 164 (62.8 bits), Expect = 9.3e-09, P = 9.3e-09
Identities = 53/152 (34%), Positives = 78/152 (51%)
Query: 77 NKSDLYAISES-LRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISD 135
+ S+L IS + RGL + L C LS + V G F +L L + L + +
Sbjct: 114 DNSNLRIISPTAFRGLTKLHTLHLHRCGLSELPV--GVFRGLFSLQYLYLQDNNLLALHE 171
Query: 136 GAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLN 195
F+ L++ L L L NN + VV L L NLDRL L N++ ++ +F LS L
Sbjct: 172 DTFLDLAN-LTYLFLHNNKIKVVTDHMLRGLV-NLDRLLLHQNRIVHVQQQAFNDLSKLT 229
Query: 196 FLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNR 227
L L +N L L+ + + PLV+L+ LRL GN+
Sbjct: 230 TLFLFFNNLTMLTGESMNPLVSLQYLRLNGNQ 261
Score = 143 (55.4 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 48/177 (27%), Positives = 76/177 (42%)
Query: 199 LSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGP 258
L NKL + + + L VL + N ++ A GL + +LD+ N + P
Sbjct: 64 LQSNKLTVVRSTSFSSVHNLTVLWMYSNNISHIEAGAFYGLERLEELDIGDNSNLRIISP 123
Query: 259 STVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHL 318
+ L+ L L + S + G GL L L N + L + +F L+ L++L
Sbjct: 124 TAFRGLTKLHTLHLHRCGLSELPVGVFRGLFSLQYLYLQDNNLLALHEDTFLDLANLTYL 183
Query: 319 DLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISM 375
L +N+I V+ L L NL L L N + + Q L L L L N+++M
Sbjct: 184 FLHNNKIKVVTDHMLRGLVNLDRLLLHQNRIVHVQQQAFNDLSKLTTLFLFFNNLTM 240
Score = 128 (50.1 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 55/203 (27%), Positives = 90/203 (44%)
Query: 123 LVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQ-LY 181
+ + S +L + +F + + L L + +N +S + A L L+ LD+ N L
Sbjct: 62 IFLQSNKLTVVRSTSFSSVHN-LTVLWMYSNNISHIEAGAFYGLE-RLEELDIGDNSNLR 119
Query: 182 KLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRS 241
+ T+F+GL+ L+ L L L L L +L+ L LQ N L L +
Sbjct: 120 IISPTAFRGLTKLHTLHLHRCGLSELPVGVFRGLFSLQYLYLQDNNLLALHEDTFLDLAN 179
Query: 242 VTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 301
+T L L HN + + L +L L + N+ V++ A L KLT+L N +
Sbjct: 180 LTYLFL-HNNKIKVVTDHMLRGLVNLDRLLLHQNRIVHVQQQAFNDLSKLTTLFLFFNNL 238
Query: 302 DVLEDHSFRALSTLSHLDLAHNR 324
+L S L +L +L L N+
Sbjct: 239 TMLTGESMNPLVSLQYLRLNGNQ 261
>WB|WBGene00020649 [details] [associations]
symbol:sma-10 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0000003
"reproduction" evidence=IMP] [GO:0040018 "positive regulation of
multicellular organism growth" evidence=IMP] [GO:0007179
"transforming growth factor beta receptor signaling pathway"
evidence=IGI] [GO:0005887 "integral to plasma membrane"
evidence=IDA] [GO:0030511 "positive regulation of transforming
growth factor beta receptor signaling pathway" evidence=IDA]
[GO:0034713 "type I transforming growth factor beta receptor
binding" evidence=IPI] [GO:0005114 "type II transforming growth
factor beta receptor binding" evidence=IPI] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0005887 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0040018 GO:GO:0000003 GO:GO:0007179 GO:GO:0030511
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101816 HSSP:Q9UQH9 EMBL:FO081576
GeneID:176849 KEGG:cel:CELE_T21D12.9 CTD:176849 UCSC:T21D12.9c.1
NextBio:894278 RefSeq:NP_499896.1 ProteinModelPortal:Q965M2
SMR:Q965M2 STRING:Q965M2 EnsemblMetazoa:T21D12.9a.1
EnsemblMetazoa:T21D12.9a.2 WormBase:T21D12.9a HOGENOM:HOG000022300
InParanoid:Q965M2 OMA:PIATIHP ArrayExpress:Q965M2 Uniprot:Q965M2
Length = 881
Score = 204 (76.9 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 65/243 (26%), Positives = 116/243 (47%)
Query: 145 LQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKL 204
L+ L L +NL+S V + L+ LA + +DLS N + L + ++ LDL+ N +
Sbjct: 125 LEKLDLRSNLISTVTSEELSYLAA-VRSVDLSRNLISYLPKPTTSAKVNIEKLDLASNSI 183
Query: 205 MTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRL 264
+ D + TL L+L N +T + LR + LDL+ N++ + +L
Sbjct: 184 TDIGTDHFSSFNTLVTLKLARNHITTLNQFSFSRLRKLESLDLTRNMIR-EVRFLAFNQL 242
Query: 265 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 324
SL+ +S+A N + G + L L+ N++ + + L++L LDL++N+
Sbjct: 243 PSLQNVSLARNDVYRLDDGMFYACEGLKHLNLSTNRVQAVTEGWMFGLTSLEVLDLSYNQ 302
Query: 325 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGF 384
I + +S +H L L L N +++L L+ L+EL L N I + VG
Sbjct: 303 IQSFHISSWSHTPKLKWLSLHSNRIQSLPSGSFRVLRQLEELILSANSIDSLHKFALVGM 362
Query: 385 NTM 387
+++
Sbjct: 363 SSL 365
Score = 196 (74.1 bits), Expect = 8.1e-12, P = 8.1e-12
Identities = 89/313 (28%), Positives = 145/313 (46%)
Query: 145 LQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKL 204
++ L L +N ++ + T + L L L+ N + L SF L L LDL+ N +
Sbjct: 173 IEKLDLASNSITDIGTDHFSSFN-TLVTLKLARNHITTLNQFSFSRLRKLESLDLTRNMI 231
Query: 205 MTLSQDCLAPLVTLRVLRLQGN---RLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTV 261
+ L +L+ + L N RL + A +GL+ L+LS N + + +
Sbjct: 232 REVRFLAFNQLPSLQNVSLARNDVYRLDDGMFYACEGLKH---LNLSTNRVQA-VTEGWM 287
Query: 262 PRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 321
L+SL+VL +++NQ S + + KL LS H N+I L SFR L L L L+
Sbjct: 288 FGLTSLEVLDLSYNQIQSFHISSWSHTPKLKWLSLHSNRIQSLPSGSFRVLRQLEELILS 347
Query: 322 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQD---LI-TPLKSLQELRLDDNDISMEP 377
N I ++ +L +S+L LDLS N L +D L T + L+ LR +N + + P
Sbjct: 348 ANSIDSLHKFALVGMSSLHKLDLSSNTLAVCVEDGAVLYNTSMPFLRSLRFTNNQLRVIP 407
Query: 378 ECIYVGFNTMD-LELIYSGVWR-HSTLLIPVMLS-LCTRSSVVTRYRYCVVLIEGSNI-- 432
+ + F ++ L+L + + H P+ L L SS + C + S I
Sbjct: 408 KRAFERFPALEELDLTDNPIATIHPEAFEPLELKRLVMNSSSILCD--CQISWLASWIYR 465
Query: 433 --LDQSALVLGCS 443
LD+S+++ CS
Sbjct: 466 LKLDKSSIIAKCS 478
Score = 189 (71.6 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 62/221 (28%), Positives = 106/221 (47%)
Query: 155 LSVVPTSALAPLAPNLDR-LDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLA 213
LS +PT+ PN R L LS N++ ++ + KG L LD+S N + + +
Sbjct: 43 LSEIPTTI-----PNNTRILLLSDNEIESIDKSRLKGFYFLQTLDISNNIIRHIDFEFFY 97
Query: 214 PLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIA 273
L L++L ++ NRL + L + LDL NL++ + + L++++ + ++
Sbjct: 98 NLPNLKILNIRKNRLA-RIPRGSHELGHLEKLDLRSNLIS-TVTSEELSYLAAVRSVDLS 155
Query: 274 HNQFSSVRRGALAGLDKLTSLSCHHNQI-DVLEDHSFRALSTLSHLDLAHNRIVAVSGAS 332
N S + + + + L N I D+ DH F + +TL L LA N I ++ S
Sbjct: 156 RNLISYLPKPTTSAKVNIEKLDLASNSITDIGTDH-FSSFNTLVTLKLARNHITTLNQFS 214
Query: 333 LAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 373
+ L L +LDL+ N +R + L SLQ + L ND+
Sbjct: 215 FSRLRKLESLDLTRNMIREVRFLAFNQLPSLQNVSLARNDV 255
Score = 182 (69.1 bits), Expect = 7.8e-13, Sum P(2) = 7.8e-13
Identities = 58/228 (25%), Positives = 103/228 (45%)
Query: 170 LDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLT 229
L LD+S+N + ++ F L +L L++ N+L + + L L L L+ N ++
Sbjct: 78 LQTLDISNNIIRHIDFEFFYNLPNLKILNIRKNRLARIPRGS-HELGHLEKLDLRSNLIS 136
Query: 230 VSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLD 289
L L +V +DLS NL++ P+T +++ ++ L +A N + + + +
Sbjct: 137 TVTSEELSYLAAVRSVDLSRNLISYLPKPTTSAKVN-IEKLDLASNSITDIGTDHFSSFN 195
Query: 290 KLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFL 349
L +L N I L SF L L LDL N I V + L +L + L+ N +
Sbjct: 196 TLVTLKLARNHITTLNQFSFSRLRKLESLDLTRNMIREVRFLAFNQLPSLQNVSLARNDV 255
Query: 350 RALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMD-LELIYSGV 396
L + + L+ L L N + E G +++ L+L Y+ +
Sbjct: 256 YRLDDGMFYACEGLKHLNLSTNRVQAVTEGWMFGLTSLEVLDLSYNQI 303
Score = 73 (30.8 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 18/46 (39%), Positives = 26/46 (56%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
L+SL+VL +++NQ S + + KL LS H N+I L SF
Sbjct: 290 LTSLEVLDLSYNQIQSFHISSWSHTPKLKWLSLHSNRIQSLPSGSF 335
Score = 58 (25.5 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 15/45 (33%), Positives = 24/45 (53%)
Query: 647 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSN 691
LK L+++ N+ +V G + GL L L +NQI S+S+
Sbjct: 269 LKHLNLSTNRVQAVTEGWMFGLTSLEVLDLSYNQIQSFHISSWSH 313
>FB|FBgn0264089 [details] [associations]
symbol:sli "slit" species:7227 "Drosophila melanogaster"
[GO:0031012 "extracellular matrix" evidence=IDA] [GO:0008347 "glial
cell migration" evidence=IMP] [GO:0050919 "negative chemotaxis"
evidence=IMP] [GO:0007509 "mesoderm migration involved in
gastrulation" evidence=IMP] [GO:0005578 "proteinaceous
extracellular matrix" evidence=TAS] [GO:0008078 "mesodermal cell
migration" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IGI;IMP;IPI] [GO:0035385 "Roundabout signaling pathway"
evidence=IGI] [GO:0030182 "neuron differentiation" evidence=IMP]
[GO:0010632 "regulation of epithelial cell migration" evidence=IMP]
[GO:2000274 "regulation of epithelial cell migration, open tracheal
system" evidence=IMP] [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007427 "epithelial cell migration, open tracheal
system" evidence=IMP] [GO:0016199 "axon midline choice point
recognition" evidence=IMP] [GO:0001764 "neuron migration"
evidence=IMP] [GO:0007432 "salivary gland boundary specification"
evidence=IMP] [GO:0035050 "embryonic heart tube development"
evidence=IMP] [GO:0022409 "positive regulation of cell-cell
adhesion" evidence=IMP] [GO:0071666 "Slit-Robo signaling complex"
evidence=IDA] [GO:0048495 "Roundabout binding" evidence=IPI]
[GO:0008201 "heparin binding" evidence=IDA] [GO:0003151 "outflow
tract morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0008406 "gonad development" evidence=IMP] [GO:0007502
"digestive tract mesoderm development" evidence=IMP] [GO:0046331
"lateral inhibition" evidence=IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 EMBL:AE013599
GO:GO:0005886 GO:GO:0001764 GO:GO:0008406 GO:GO:0005578
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0016199 GO:GO:0008201 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
Reactome:REACT_113552 GO:GO:0048813 PROSITE:PS01186 GO:GO:0046331
InterPro:IPR001791 Pfam:PF00054 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 GO:GO:0007427 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0003151 GO:GO:0008078 GO:GO:0008347
GO:GO:0007432 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 GO:GO:0022409 InterPro:IPR026906 Pfam:PF13306
GO:GO:2000274 GO:GO:0035050 Pfam:PF01463 GO:GO:0007502
GeneTree:ENSGT00700000104083 GO:GO:0035385 KO:K06839 GO:GO:0050929
EMBL:X53959 EMBL:AF126540 EMBL:M23543 PIR:A36665 PIR:B36665
RefSeq:NP_001097333.1 RefSeq:NP_001097334.1 RefSeq:NP_476727.1
RefSeq:NP_476728.1 RefSeq:NP_476729.1 UniGene:Dm.4729 PDB:1W8A
PDBsum:1W8A ProteinModelPortal:P24014 SMR:P24014 STRING:P24014
PaxDb:P24014 EnsemblMetazoa:FBtr0330731 EnsemblMetazoa:FBtr0330733
GeneID:36746 KEGG:dme:Dmel_CG8355 CTD:36746 FlyBase:FBgn0003425
InParanoid:P24014 OMA:RHKMFKG OrthoDB:EOG46DJHK PhylomeDB:P24014
EvolutionaryTrace:P24014 GenomeRNAi:36746 NextBio:800151
Bgee:P24014 GermOnline:CG8355 GO:GO:0071666 Uniprot:P24014
Length = 1504
Score = 187 (70.9 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 94/329 (28%), Positives = 146/329 (44%)
Query: 63 LCACDLPHTLRCTANKSDLYAISESLRGLEPDERVSLL--DCTLSNVTVLPGKFLEGVTL 120
+C C+ T+ CT + E R + P LL D L ++ G F L
Sbjct: 546 MCHCE-GTTVDCTGR-----GLKEIPRDI-PLHTTELLLNDNELGRISS-DGLFGRLPHL 597
Query: 121 HGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQL 180
L + +L I AF G +S +Q L L N + + L L L+L NQ+
Sbjct: 598 VKLELKRNQLTGIEPNAFEG-ASHIQELQLGENKIKEISNKMFLGLH-QLKTLNLYDNQI 655
Query: 181 YKLENTSFKGLSSLNFLDLSYNKLMTLSQDC-LAPLVT-LRVLRLQGNRLTVSVVAALQG 238
+ SF+ L+SL L+L+ N + +C LA LR L G + A
Sbjct: 656 SCVMPGSFEHLNSLTSLNLASNPF---NCNCHLAWFAEWLRKKSLNGG---AARCGAPSK 709
Query: 239 LRSVTDLDLSHNLLA-------GPLGPSTVPRLSSLK--VLSIAHNQFSSVRRGALAGLD 289
+R V DL H+ G LG P + V+ + NQ + RG A
Sbjct: 710 VRDVQIKDLPHSEFKCSSENSEGCLGDGYCPPSCTCTGTVVRCSRNQLKEIPRGIPA--- 766
Query: 290 KLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFL 349
+ + L N+I+ + R L +L+ LDL++N+I +S + A+L+ L+TL +S+N L
Sbjct: 767 ETSELYLESNEIEQIHYERIRHLRSLTRLDLSNNQITILSNYTFANLTKLSTLIISYNKL 826
Query: 350 RALTQDLITPLKSLQELRLDDNDISMEPE 378
+ L + ++ L +L+ L L N ISM PE
Sbjct: 827 QCLQRHALSGLNNLRVLSLHGNRISMLPE 855
Score = 178 (67.7 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 85/313 (27%), Positives = 138/313 (44%)
Query: 96 RVSLLDCTLSNV-TVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNL 154
++ +L T + + T+ F + V+L L +++ LK I + F+ S+ L L + NN+
Sbjct: 125 KLRMLQLTDNQIHTIERNSFQDLVSLERLRLNNNRLKAIPEN-FVTSSASLLRLDISNNV 183
Query: 155 LSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAP 214
++ V A +L L L +NQ+ L+ +FKGL L L L+ N L +L +
Sbjct: 184 ITTVGRRVFKG-AQSLRSLQLDNNQITCLDEHAFKGLVELEILTLNNNNLTSLPHNIFGG 242
Query: 215 LVTLRVLRLQGNRLTVSV-VAALQG-LRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSI 272
L LR LRL N ++ L LRS T L P P S LK ++
Sbjct: 243 LGRLRALRLSDNPFACDCHLSWLSRFLRSATRL--------APYTRCQSP--SQLKGQNV 292
Query: 273 A--HNQ-FSSVRRGALAGLDKLTSLSCHH--NQIDVLEDHSFRALSTL--------SHLD 319
A H+Q F A ++ SC H D + D ++L+++ + L
Sbjct: 293 ADLHDQEFKCSGLTEHAPMECGAENSCPHPCRCADGIVDCREKSLTSVPVTLPDDTTELR 352
Query: 320 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPEC 379
L N I + S + L +DLS+N + + D ++ LK L L L N I P
Sbjct: 353 LEQNFITELPPKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQLTTLVLYGNKIKDLPSG 412
Query: 380 IYVGFNTMDLELI 392
++ G ++ L L+
Sbjct: 413 VFKGLGSLQLLLL 425
Score = 173 (66.0 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 48/164 (29%), Positives = 83/164 (50%)
Query: 160 TSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLR 219
TS ++ +++RL+L N L + T F+ L+ L L L+ N++ T+ ++ LV+L
Sbjct: 92 TSVPRKISADVERLELQGNNLTVIYETDFQRLTKLRMLQLTDNQIHTIERNSFQDLVSLE 151
Query: 220 VLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSS 279
LRL NRL + S+ LD+S+N++ +G SL+ L + +NQ +
Sbjct: 152 RLRLNNNRLKAIPENFVTSSASLLRLDISNNVIT-TVGRRVFKGAQSLRSLQLDNNQITC 210
Query: 280 VRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 323
+ A GL +L L+ ++N + L + F L L L L+ N
Sbjct: 211 LDEHAFKGLVELEILTLNNNNLTSLPHNIFGGLGRLRALRLSDN 254
Score = 163 (62.4 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 48/136 (35%), Positives = 73/136 (53%)
Query: 119 TLHGLVI--SSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLS 176
T G V+ S +LK I G + + L L +N + + + L +L RLDLS
Sbjct: 744 TCTGTVVRCSRNQLKEIPRG----IPAETSELYLESNEIEQIHYERIRHLR-SLTRLDLS 798
Query: 177 HNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAAL 236
+NQ+ L N +F L+ L+ L +SYNKL L + L+ L LRVL L GNR+++ +
Sbjct: 799 NNQITILSNYTFANLTKLSTLIISYNKLQCLQRHALSGLNNLRVLSLHGNRISMLPEGSF 858
Query: 237 QGLRSVTDLDLSHNLL 252
+ L+S+T + L N L
Sbjct: 859 EDLKSLTHIALGSNPL 874
Score = 136 (52.9 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 75/320 (23%), Positives = 134/320 (41%)
Query: 66 CDLPHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVI 125
C P L+ N +DL+ GL E + +C N P + +G+ +
Sbjct: 281 CQSPSQLK-GQNVADLHDQEFKCSGLT--EHAPM-ECGAENSCPHPCRCADGI------V 330
Query: 126 SSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLEN 185
E K+++ + L L L N ++ +P + + L R+DLS+N + ++ +
Sbjct: 331 DCRE-KSLTSVP-VTLPDDTTELRLEQNFITELPPKSFSSFR-RLRRIDLSNNNISRIAH 387
Query: 186 TSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDL 245
+ GL L L L NK+ L L +L++L L N ++ A + L S++ L
Sbjct: 388 DALSGLKQLTTLVLYGNKIKDLPSGVFKGLGSLQLLLLNANEISCIRKDAFRDLHSLSLL 447
Query: 246 DLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQF-SSVRRGALAG-LDK----LTSLSC--- 296
L N + L T + S+K + +A N F LA L K + C
Sbjct: 448 SLYDNNIQS-LANGTFDAMKSIKTVHLAKNPFICDCNLRWLADYLHKNPIETSGARCESP 506
Query: 297 ---HHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALT 353
H +I+ L + F+ + L+ + ++ H TT+D + L+ +
Sbjct: 507 KRMHRRRIESLREEKFKCSWDELRMKLSGECRMDSDCPAMCHCEG-TTVDCTGRGLKEIP 565
Query: 354 QDLITPLKSLQELRLDDNDI 373
+D+ PL + EL L+DN++
Sbjct: 566 RDI--PLHTT-ELLLNDNEL 582
Score = 130 (50.8 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 49/212 (23%), Positives = 94/212 (44%)
Query: 242 VTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 301
V L+L N L + + RL+ L++L + NQ ++ R + L L L ++N++
Sbjct: 102 VERLELQGNNLT-VIYETDFQRLTKLRMLQLTDNQIHTIERNSFQDLVSLERLRLNNNRL 160
Query: 302 DVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLK 361
+ ++ + ++L LD+++N I V +L +L L +N + L + L
Sbjct: 161 KAIPENFVTSSASLLRLDISNNVITTVGRRVFKGAQSLRSLQLDNNQITCLDEHAFKGLV 220
Query: 362 SLQELRLDDNDISMEPECIYVGFNTMDLELIYSGVWR---HSTLLIPVMLSLCTRSSVVT 418
L+ L L++N+++ P I+ G + + + H + L + S TR + T
Sbjct: 221 ELEILTLNNNNLTSLPHNIFGGLGRLRALRLSDNPFACDCHLSWLSRFLRS-ATRLAPYT 279
Query: 419 RYRYCVVLIEGSNILDQSALVLGCSEILALVP 450
R + L +G N+ D CS + P
Sbjct: 280 RCQSPSQL-KGQNVADLHDQEFKCSGLTEHAP 310
Score = 122 (48.0 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 79/343 (23%), Positives = 134/343 (39%)
Query: 69 PHTLRCTANKSDLYAIS-ESLRGLEPDERVSLLDCTLSNVTVLPGK-FLEGVTLHGLVIS 126
PH RC D S S+ PD+ L + +T LP K F L + +S
Sbjct: 320 PHPCRCADGIVDCREKSLTSVPVTLPDDTTELR-LEQNFITELPPKSFSSFRRLRRIDLS 378
Query: 127 SGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENT 186
+ + I+ A GL L L L N + +P+ L +L L L+ N++ +
Sbjct: 379 NNNISRIAHDALSGLKQ-LTTLVLYGNKIKDLPSGVFKGLG-SLQLLLLNANEISCIRKD 436
Query: 187 SFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLD 246
+F+ L SL+ L L N + +L+ + +++ + L N LR + D
Sbjct: 437 AFRDLHSLSLLSLYDNNIQSLANGTFDAMKSIKTVHLAKNPFICDC-----NLRWLADY- 490
Query: 247 LSHNLLAGPLGPSTVP-RLSSLKVLSIAHNQFS---SVRRGALAG---LDKLTSLSCHHN 299
L N + P R+ ++ S+ +F R L+G +D CH
Sbjct: 491 LHKNPIETSGARCESPKRMHRRRIESLREEKFKCSWDELRMKLSGECRMDSDCPAMCHCE 550
Query: 300 QIDVLEDHSFRALSTL--------SHLDLAHNRIVAVSGASL-AHLSNLTTLDLSHNFLR 350
V D + R L + + L L N + +S L L +L L+L N L
Sbjct: 551 GTTV--DCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLT 608
Query: 351 ALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELIY 393
+ + +QEL+L +N I +++G + + +Y
Sbjct: 609 GIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLY 651
Score = 90 (36.7 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L+ L L I++N+ ++R AL+GL+ L LS H N+I +L + SF ++
Sbjct: 813 LTKLSTLIISYNKLQCLQRHALSGLNNLRVLSLHGNRISMLPEGSFEDL 861
Score = 68 (29.0 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 15/49 (30%), Positives = 28/49 (57%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L SL L +++NQ + + A L KL++L +N++ L+ H+ S +
Sbjct: 789 LRSLTRLDLSNNQITILSNYTFANLTKLSTLIISYNKLQCLQRHALSGL 837
Score = 62 (26.9 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 14/46 (30%), Positives = 26/46 (56%)
Query: 647 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L+ + +++N S + AL+GL +LT+L + N+I L F +
Sbjct: 372 LRRIDLSNNNISRIAHDALSGLKQLTTLVLYGNKIKDLPSGVFKGL 417
Score = 60 (26.2 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 679
L LK L++ NQ S V G+ L+ LTSL+ N
Sbjct: 642 LHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASN 677
Score = 59 (25.8 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 12/43 (27%), Positives = 23/43 (53%)
Query: 650 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L + N+ + + L LT L +NQI +L +++F+N+
Sbjct: 771 LYLESNEIEQIHYERIRHLRSLTRLDLSNNQITILSNYTFANL 813
Score = 56 (24.8 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 12/48 (25%), Positives = 24/48 (50%)
Query: 645 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
S ++ L + N+ + GL +L +L+ + NQI + SF ++
Sbjct: 619 SHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHL 666
Score = 53 (23.7 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
L++L+VLS+ N+ S + G+ L LT ++ N +
Sbjct: 837 LNNLRVLSLHGNRISMLPEGSFEDLKSLTHIALGSNPL 874
Score = 46 (21.3 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 12/49 (24%), Positives = 21/49 (42%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L L + N+ + G GL L L + N+I + +F ++
Sbjct: 393 LKQLTTLVLYGNKIKDLPSGVFKGLGSLQLLLLNANEISCIRKDAFRDL 441
Score = 45 (20.9 bits), Expect = 6.2e-09, Sum P(2) = 6.2e-09
Identities = 18/92 (19%), Positives = 36/92 (39%)
Query: 598 RKICRTPRNSTIHHHACFIPVAQQEDDINRNNSDSRYVKLQATTILLSSLKVLSIAHNQF 657
R + PR+ +H + ++++ R +SD + +L L L + NQ
Sbjct: 559 RGLKEIPRDIPLHTTELLL----NDNELGRISSDGLFGRLP-------HLVKLELKRNQL 607
Query: 658 SSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
+ + A G + L N+I + + F
Sbjct: 608 TGIEPNAFEGASHIQELQLGENKIKEISNKMF 639
Score = 39 (18.8 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 605 RNSTIHHHACFIPVAQQEDDINR 627
+N H CF P AQ D + R
Sbjct: 1140 QNHECKHGVCFQPNAQGSDYLCR 1162
>UNIPROTKB|E2RIV9 [details] [associations]
symbol:TLR3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0034123 "positive regulation of toll-like
receptor signaling pathway" evidence=IEA] [GO:0032760 "positive
regulation of tumor necrosis factor production" evidence=IEA]
[GO:0032757 "positive regulation of interleukin-8 production"
evidence=IEA] [GO:0032755 "positive regulation of interleukin-6
production" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0051607 "defense response to virus" evidence=IEA]
[GO:0050729 "positive regulation of inflammatory response"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0034138 "toll-like receptor 3 signaling pathway" evidence=IEA]
[GO:0004888 "transmembrane signaling receptor activity"
evidence=IEA] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0002756 "MyD88-independent toll-like receptor
signaling pathway" evidence=IEA] [GO:0032735 "positive regulation
of interleukin-12 production" evidence=IEA] [GO:0032728 "positive
regulation of interferon-beta production" evidence=IEA] [GO:0032722
"positive regulation of chemokine production" evidence=IEA]
[GO:0007252 "I-kappaB phosphorylation" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0071260 "cellular response to
mechanical stimulus" evidence=IEA] [GO:0051092 "positive regulation
of NF-kappaB transcription factor activity" evidence=IEA]
[GO:0046330 "positive regulation of JNK cascade" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045359 "positive
regulation of interferon-beta biosynthetic process" evidence=IEA]
[GO:0045356 "positive regulation of interferon-alpha biosynthetic
process" evidence=IEA] [GO:0045080 "positive regulation of
chemokine biosynthetic process" evidence=IEA] [GO:0045078 "positive
regulation of interferon-gamma biosynthetic process" evidence=IEA]
[GO:0043330 "response to exogenous dsRNA" evidence=IEA] [GO:0043123
"positive regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA] [GO:0042346 "positive regulation of NF-kappaB import
into nucleus" evidence=IEA] [GO:0034346 "positive regulation of
type III interferon production" evidence=IEA] Pfam:PF00560
InterPro:IPR000157 InterPro:IPR001611 InterPro:IPR027173
Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
GO:GO:0016021 GO:GO:0005737 GO:GO:0006952 GO:GO:0043123
GO:GO:0046330 GO:GO:0045944 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0032722 GO:GO:0032755
GO:GO:0009615 GO:GO:0051092 GO:GO:0032757 GO:GO:0071260
InterPro:IPR000372 SMART:SM00013 GO:GO:0032760 GO:GO:0043330
GO:GO:0032735 GO:GO:0042346 GO:GO:0045078 GO:GO:0032728
GO:GO:0007252 GO:GO:0045080 SUPFAM:SSF52200 GO:GO:0045359
GeneTree:ENSGT00680000099674 GO:GO:0034123 CTD:7098 KO:K05401
PANTHER:PTHR24365:SF5 OMA:IANINDD GO:GO:0045356 GO:GO:0034346
EMBL:AAEX03010493 RefSeq:XP_540020.2 ProteinModelPortal:E2RIV9
Ensembl:ENSCAFT00000011868 GeneID:482905 KEGG:cfa:482905
Uniprot:E2RIV9
Length = 905
Score = 193 (73.0 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 65/232 (28%), Positives = 108/232 (46%)
Query: 166 LAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQG 225
L N+ L+L+HNQL +L +F S L LD +N + L + L L +L LQ
Sbjct: 50 LPANITVLNLTHNQLRRLPPANFTRYSQLTILDGGFNSISKLEPELCQKLPLLEILNLQH 109
Query: 226 NRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGAL 285
N L+ ++T+L L N + + + L +L L ++HN SS + G+
Sbjct: 110 NELSHLSDQTFVFCVNLTELHLMSNSIK-IIQNNPFRSLKNLVKLDLSHNGLSSTKLGSQ 168
Query: 286 AGLDKLTSLSCHHNQIDVL--EDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLD 343
L+ L L +N+I+VL E+ F S+L L+L+ N I S + L L
Sbjct: 169 LQLENLQELLLSNNKINVLRREELDFLGNSSLEKLELSSNPIKEFSPGCFHAIGKLFGLS 228
Query: 344 LSHNFLR-ALTQDLITPLK--SLQELRLDDNDISMEPECIYVGFNTMDLELI 392
L++ L +LT++L L S+Q L L + + ++G +L ++
Sbjct: 229 LNNVQLNPSLTENLCLELSNTSIQNLSLSNTQLHRTSNMTFLGLKHTNLTML 280
Score = 191 (72.3 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 88/339 (25%), Positives = 151/339 (44%)
Query: 96 RVSLLDCTLSNVTVLPGKFLEGVTLHGLV-ISSGELKNISDGAFIGLSSPLQALGLPNNL 154
++++LD ++++ L + + + L ++ + EL ++SD F+ + L L L +N
Sbjct: 77 QLTILDGGFNSISKLEPELCQKLPLLEILNLQHNELSHLSDQTFVFCVN-LTELHLMSNS 135
Query: 155 LSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAP 214
+ ++ + L NL +LDLSHN L + S L +L L LS NK+ L ++ L
Sbjct: 136 IKIIQNNPFRSLK-NLVKLDLSHNGLSSTKLGSQLQLENLQELLLSNNKINVLRREELDF 194
Query: 215 L--VTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLS--SLKVL 270
L +L L L N + + + L L++ L L + LS S++ L
Sbjct: 195 LGNSSLEKLELSSNPIKEFSPGCFHAIGKLFGLSLNNVQLNPSLTENLCLELSNTSIQNL 254
Query: 271 SIAHNQFSSVRRGALAGLD--KLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAV 328
S+++ Q GL LT L HN ++V+E++SF L L + L +N I +
Sbjct: 255 SLSNTQLHRTSNMTFLGLKHTNLTMLDLSHNNLNVIENNSFVWLPHLEYFLLEYNNIEHL 314
Query: 329 SGASLAHLSNLTTLDLSHNFLRALTQDLITP---------LKSLQELRLDDNDISMEPEC 379
S L N+ LDL +F + T P LK LQ L ++DN +
Sbjct: 315 FSHSFYGLLNVRYLDLKRSFAKQSTSLASHPRIDDFSFQWLKCLQYLNMEDNYFAGIKSN 374
Query: 380 IYVGFNTMDLELIYSGVWRHSTLLIPVMLSLCTRSSVVT 418
++ G + + + TL LSL +S ++T
Sbjct: 375 MFTGLIKLKHLSLSNSFTSLQTLTNETFLSLA-QSPLIT 412
Score = 179 (68.1 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 79/276 (28%), Positives = 126/276 (45%)
Query: 111 PGKFLEGVTLHGLVISSGELK-NISDGAFIGLSSP-LQALGLPNNLLSVVPTSALAPLA- 167
PG F L GL +++ +L ++++ + LS+ +Q L L N L L
Sbjct: 215 PGCFHAIGKLFGLSLNNVQLNPSLTENLCLELSNTSIQNLSLSNTQLHRTSNMTFLGLKH 274
Query: 168 PNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGN- 226
NL LDLSHN L +EN SF L L + L YN + L L+ +R L L+ +
Sbjct: 275 TNLTMLDLSHNNLNVIENNSFVWLPHLEYFLLEYNNIEHLFSHSFYGLLNVRYLDLKRSF 334
Query: 227 -RLTVSVVA-------ALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFS 278
+ + S+ + + Q L+ + L++ N AG + + L LK LS++ N F+
Sbjct: 335 AKQSTSLASHPRIDDFSFQWLKCLQYLNMEDNYFAG-IKSNMFTGLIKLKHLSLS-NSFT 392
Query: 279 SVR---RGALAGLDK--LTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI-VAVSGAS 332
S++ L + L +L+ N+I +E +F L L LDL N I ++G
Sbjct: 393 SLQTLTNETFLSLAQSPLITLNLTKNKISKIESGAFSWLGHLQVLDLGLNEIGQELTGQE 452
Query: 333 LAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRL 368
L N+ + LS+N LT + SL+ L L
Sbjct: 453 WRGLENIVEIYLSYNKYLQLTSSSFALIPSLRRLML 488
Score = 170 (64.9 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 74/285 (25%), Positives = 129/285 (45%)
Query: 96 RVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLL 155
R + DC+ +T +P +T+ L ++ +L+ + F S G N++
Sbjct: 32 RHEVADCSHLKLTQVPDDLPANITV--LNLTHNQLRRLPPANFTRYSQLTILDGGFNSIS 89
Query: 156 SVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPL 215
+ P L P L+ L+L HN+L L + +F +L L L N + + + L
Sbjct: 90 KLEPE--LCQKLPLLEILNLQHNELSHLSDQTFVFCVNLTELHLMSNSIKIIQNNPFRSL 147
Query: 216 VTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRL--SSLKVLSIA 273
L L L N L+ + + + L ++ +L LS+N + L + L SSL+ L ++
Sbjct: 148 KNLVKLDLSHNGLSSTKLGSQLQLENLQELLLSNNKI-NVLRREELDFLGNSSLEKLELS 206
Query: 274 HNQFSSVRRGALAGLDKLTSLSCHHNQIDV-LEDHSFRALSTLS--HLDLAHNRIVAVSG 330
N G + KL LS ++ Q++ L ++ LS S +L L++ ++ S
Sbjct: 207 SNPIKEFSPGCFHAIGKLFGLSLNNVQLNPSLTENLCLELSNTSIQNLSLSNTQLHRTSN 266
Query: 331 ASLAHL--SNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 373
+ L +NLT LDLSHN L + + L L+ L+ N+I
Sbjct: 267 MTFLGLKHTNLTMLDLSHNNLNVIENNSFVWLPHLEYFLLEYNNI 311
Score = 169 (64.5 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 79/280 (28%), Positives = 120/280 (42%)
Query: 133 ISDGAFIGLSSPLQALGLPNNLLSV--VPTSALAPLAPN-LDRLDLSHNQLYKLENTSFK 189
I F GL L+ L L N+ S+ + LA + L L+L+ N++ K+E+ +F
Sbjct: 371 IKSNMFTGLIK-LKHLSLSNSFTSLQTLTNETFLSLAQSPLITLNLTKNKISKIESGAFS 429
Query: 190 GLSSLNFLDLSYNKL-MTLSQDCLAPLVTLRVLRLQGNR---LTVSVVAALQGLRSVTDL 245
L L LDL N++ L+ L + + L N+ LT S A + LR L
Sbjct: 430 WLGHLQVLDLGLNEIGQELTGQEWRGLENIVEIYLSYNKYLQLTSSSFALIPSLRR---L 486
Query: 246 DLSHNLLAG-PLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL 304
L L PS L +L +L +++N +++ L GL+KL L HN + L
Sbjct: 487 MLRRTALRNVDSSPSPFHPLRNLNILDLSNNNIANINDELLEGLEKLEILDMQHNNLARL 546
Query: 305 EDHS-----FRALSTLSHL---DLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDL 356
H+ L LSHL +L N + LS L ++DL N L L
Sbjct: 547 WKHANPGGPVHFLKGLSHLHILNLESNGFDEIPAEVFKGLSELKSIDLGLNNLNIFPSSL 606
Query: 357 ITPLKSLQELRLDDNDI-SMEPECIYVGF-NTMDLELIYS 394
SL+ L L N I S+E F N +L++ ++
Sbjct: 607 FNDQVSLKSLNLQKNLITSVEKNVFGPAFRNLSNLDMSFN 646
Score = 124 (48.7 bits), Expect = 0.00053, P = 0.00053
Identities = 56/182 (30%), Positives = 84/182 (46%)
Query: 79 SDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAF 138
S +A+ SLR R+ L L NV P F L+ L +S+ + NI+D
Sbjct: 474 SSSFALIPSLR------RLMLRRTALRNVDSSPSPFHPLRNLNILDLSNNNIANINDELL 527
Query: 139 IGLSSPLQALGLPNNLLSVV--------PTSALAPLAPNLDRLDLSHNQLYKLENTSFKG 190
GL L+ L + +N L+ + P L L+ +L L+L N ++ FKG
Sbjct: 528 EGLEK-LEILDMQHNNLARLWKHANPGGPVHFLKGLS-HLHILNLESNGFDEIPAEVFKG 585
Query: 191 LSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQG--LRSVTDLDLS 248
LS L +DL N L V+L+ L LQ N +T SV + G R++++LD+S
Sbjct: 586 LSELKSIDLGLNNLNIFPSSLFNDQVSLKSLNLQKNLIT-SVEKNVFGPAFRNLSNLDMS 644
Query: 249 HN 250
N
Sbjct: 645 FN 646
Score = 120 (47.3 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 38/129 (29%), Positives = 58/129 (44%)
Query: 246 DLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLE 305
D SH L P +P +++ VL++ HNQ + +LT L N I LE
Sbjct: 37 DCSHLKLTQV--PDDLP--ANITVLNLTHNQLRRLPPANFTRYSQLTILDGGFNSISKLE 92
Query: 306 DHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQE 365
+ L L L+L HN + +S + NLT L L N ++ + + LK+L +
Sbjct: 93 PELCQKLPLLEILNLQHNELSHLSDQTFVFCVNLTELHLMSNSIKIIQNNPFRSLKNLVK 152
Query: 366 LRLDDNDIS 374
L L N +S
Sbjct: 153 LDLSHNGLS 161
Score = 69 (29.3 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 14/45 (31%), Positives = 25/45 (55%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHS 688
L +L +L +++N +++ L GL+KL L HN + L H+
Sbjct: 506 LRNLNILDLSNNNIANINDELLEGLEKLEILDMQHNNLARLWKHA 550
Score = 64 (27.6 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL 684
L +L L ++HN SS + G+ L+ L L +N+I+VL
Sbjct: 147 LKNLVKLDLSHNGLSSTKLGSQLQLENLQELLLSNNKINVL 187
Score = 59 (25.8 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 12/49 (24%), Positives = 24/49 (48%)
Query: 645 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNVI 693
++L +L ++HN + + + L L +N I+ L HSF ++
Sbjct: 275 TNLTMLDLSHNNLNVIENNSFVWLPHLEYFLLEYNNIEHLFSHSFYGLL 323
Score = 50 (22.7 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 13/48 (27%), Positives = 24/48 (50%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN--QIDVLEDHSF 689
L L+ L++ N F+ ++ GL KL LS ++ + L + +F
Sbjct: 355 LKCLQYLNMEDNYFAGIKSNMFTGLIKLKHLSLSNSFTSLQTLTNETF 402
Score = 45 (20.9 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 645 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
S L L++ N+ S + GA + L L L N+I
Sbjct: 408 SPLITLNLTKNKISKIESGAFSWLGHLQVLDLGLNEI 444
Score = 41 (19.5 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 15/51 (29%), Positives = 24/51 (47%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAG--LDKLTSLSCHHNQIDVLEDHSFSNV 692
L L++L + HN + + + A G + L LS H I LE + F +
Sbjct: 530 LEKLEILDMQHNNLARLWKHANPGGPVHFLKGLS--HLHILNLESNGFDEI 578
>UNIPROTKB|O75093 [details] [associations]
symbol:SLIT1 "Slit homolog 1 protein" species:9606 "Homo
sapiens" [GO:0021510 "spinal cord development" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0040023 "establishment of nucleus localization" evidence=IEA]
[GO:0043395 "heparan sulfate proteoglycan binding" evidence=IEA]
[GO:0048843 "negative regulation of axon extension involved in axon
guidance" evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0005509 "calcium ion binding" evidence=NAS]
[GO:0005615 "extracellular space" evidence=NAS] [GO:0048853
"forebrain morphogenesis" evidence=NAS] [GO:0048846 "axon extension
involved in axon guidance" evidence=IDA] [GO:0050919 "negative
chemotaxis" evidence=IDA] [GO:0051964 "negative regulation of
synapse assembly" evidence=ISS] [GO:0048495 "Roundabout binding"
evidence=IPI] [GO:0021834 "chemorepulsion involved in embryonic
olfactory bulb interneuron precursor migration" evidence=IDA]
[GO:0007411 "axon guidance" evidence=IDA;TAS] [GO:0005737
"cytoplasm" evidence=IDA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005737
Reactome:REACT_111045 GO:GO:0005615 EMBL:CH471066 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS50025
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0040023 InterPro:IPR025875 Pfam:PF12799 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 GO:GO:0051964
GO:GO:0048853 Pfam:PF01463 EMBL:AL442123 GO:GO:0022028
GO:GO:0050919 GO:GO:0048843 EMBL:AB017167 EMBL:AB011537
EMBL:AL512424 EMBL:BC146851 EMBL:AY029183 IPI:IPI00296434
IPI:IPI00871419 RefSeq:NP_003052.2 UniGene:Hs.632082
ProteinModelPortal:O75093 SMR:O75093 IntAct:O75093
MINT:MINT-2797238 STRING:O75093 PhosphoSite:O75093 PaxDb:O75093
PRIDE:O75093 Ensembl:ENST00000266058 GeneID:6585 KEGG:hsa:6585
UCSC:uc001kmw.2 CTD:6585 GeneCards:GC10M098747 H-InvDB:HIX0079168
H-InvDB:HIX0170440 HGNC:HGNC:11085 HPA:HPA006879 MIM:603742
neXtProt:NX_O75093 PharmGKB:PA35938 HOGENOM:HOG000116120
HOVERGEN:HBG057959 InParanoid:O75093 KO:K06838 OrthoDB:EOG4VDPXM
PhylomeDB:O75093 ChiTaRS:SLIT1 GenomeRNAi:6585 NextBio:25625
ArrayExpress:O75093 Bgee:O75093 CleanEx:HS_SLIT1
Genevestigator:O75093 GermOnline:ENSG00000187122 Uniprot:O75093
Length = 1534
Score = 159 (61.0 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 84/342 (24%), Positives = 142/342 (41%)
Query: 67 DLP-HTLRCTANKSDLYAISES-LRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLV 124
++P +T R N +++ I ++ GL+ + L++ + V G F + L L
Sbjct: 58 NIPRNTERLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVE--RGAFDDMKELERLR 115
Query: 125 ISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLE 184
++ +L + + F + L L L N + +P A A +L L L NQ+ +E
Sbjct: 116 LNRNQLHMLPELLFQN-NQALSRLDLSENAIQAIPRKAFRG-ATDLKNLQLDKNQISCIE 173
Query: 185 NTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSV-VAAL-QGLRSV 242
+F+ L L L L+ N + T+ + LR RL N L +A L Q LR
Sbjct: 174 EGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQR 233
Query: 243 TDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDK--LTSLSCH--- 297
+ L +GP L L V + ++FS +G + L+S SC
Sbjct: 234 PTIGL-FTQCSGPAS------LRGLNVAEVQKSEFSCSGQGEAGRVPTCTLSSGSCPAMC 286
Query: 298 --HNQIDVLEDHSFRAL-----STLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLR 350
N I A+ T++ + L N I ++ + + L +DLS+N +
Sbjct: 287 TCSNGIVDCRGKGLTAIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIA 346
Query: 351 ALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELI 392
+ D L+SL L L N I+ P ++ G T+ L L+
Sbjct: 347 EIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLL 388
Score = 153 (58.9 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 43/137 (31%), Positives = 70/137 (51%)
Query: 141 LSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLS 200
L + + L N + +P A +P L R+DLS+NQ+ ++ +F+GL SLN L L
Sbjct: 307 LPETMTEIRLELNGIKSIPPGAFSPYR-KLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLY 365
Query: 201 YNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPST 260
NK+ L + L TL++L L N++ A Q L++++ L L N + L T
Sbjct: 366 GNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQS-LAKGT 424
Query: 261 VPRLSSLKVLSIAHNQF 277
L +++ L +A N F
Sbjct: 425 FTSLRAIQTLHLAQNPF 441
Score = 146 (56.5 bits), Expect = 8.1e-13, Sum P(2) = 8.1e-13
Identities = 38/131 (29%), Positives = 72/131 (54%)
Query: 148 LGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTL 207
L L NN +S++ + + +L +++LS+N++ ++E+ +F+G +S++ L L+ N+L ++
Sbjct: 545 LRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESI 604
Query: 208 SQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSL 267
L LR L L+ NR++ + GLR+V L L N + + P L SL
Sbjct: 605 RSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIT-TVSPGAFDTLQSL 663
Query: 268 KVLSIAHNQFS 278
L++ N F+
Sbjct: 664 STLNLLANPFN 674
Score = 137 (53.3 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 52/174 (29%), Positives = 82/174 (47%)
Query: 61 NDLCACDL--PHTLRCTANKSDLYAISESLRGLEPDERV--SLLDCTLSN--VTVLP--G 112
N C D+ PH RC AN + SL+ + ER+ S + L+N +++L G
Sbjct: 504 NSECNSDVVCPHKCRCEANVVEC----SSLKLTKIPERIPQSTAELRLNNNEISILEATG 559
Query: 113 KFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDR 172
F + L + +S+ ++ I DGAF G +S + L L N L + + L L
Sbjct: 560 MFKKLTHLKKINLSNNKVSEIEDGAFEGAAS-VSELHLTANQLESIRSGMFRGL-DGLRT 617
Query: 173 LDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGN 226
L L +N++ + N SF GL ++ L L N++ T+S L +L L L N
Sbjct: 618 LMLRNNRISCIHNDSFTGLRNVRLLSLYDNQITTVSPGAFDTLQSLSTLNLLAN 671
Score = 135 (52.6 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 37/144 (25%), Positives = 68/144 (47%)
Query: 240 RSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 299
+S +L L++N ++ +L+ LK +++++N+ S + GA G ++ L N
Sbjct: 540 QSTAELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTAN 599
Query: 300 QIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITP 359
Q++ + FR L L L L +NRI + S L N+ L L N + ++
Sbjct: 600 QLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQITTVSPGAFDT 659
Query: 360 LKSLQELRLDDNDISMEPECIYVG 383
L+SL L L N + + ++G
Sbjct: 660 LQSLSTLNLLANPFNCNCQLAWLG 683
Score = 128 (50.1 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 46/168 (27%), Positives = 78/168 (46%)
Query: 206 TLSQDCLAPLVTLR--VLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPR 263
TLS + T ++ +G LT ++ A L ++T++ L N + + P
Sbjct: 276 TLSSGSCPAMCTCSNGIVDCRGKGLT-AIPANLP--ETMTEIRLELNGIKS-IPPGAFSP 331
Query: 264 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 323
L+ + +++NQ + + A GL L SL + N+I L F L TL L L N
Sbjct: 332 YRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNAN 391
Query: 324 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
+I + + L NL+ L L N +++L + T L+++Q L L N
Sbjct: 392 KINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQN 439
Score = 122 (48.0 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 86/348 (24%), Positives = 143/348 (41%)
Query: 60 KNDLCACDLPHTLRCTANKSDLYAISESLRGLEPD-ERVSLLDCTLSNVTVLPGK-FLEG 117
KND L+ N+ + A+ RG D + + L + + +LP F
Sbjct: 78 KNDFAGLKQLRVLQLMENQ--IGAVE---RGAFDDMKELERLRLNRNQLHMLPELLFQNN 132
Query: 118 VTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSH 177
L L +S ++ I AF G ++ L+ L L N +S + A L L+ L L++
Sbjct: 133 QALSRLDLSENAIQAIPRKAFRG-ATDLKNLQLDKNQISCIEEGAFRALR-GLEVLTLNN 190
Query: 178 NQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDC-LAPLVT-LRVLRLQGNRLTVSVVAA 235
N + + +SF + L L N L DC LA L LR G S A+
Sbjct: 191 NNITTIPVSSFNHMPKLRTFRLHSNHLFC---DCHLAWLSQWLRQRPTIGLFTQCSGPAS 247
Query: 236 LQGLRSVTDLDLSHNLLAGPLGPSTVPR--LSS--LKVLSIAHNQFSSVRRGALAGL--- 288
L+GL +V ++ S +G VP LSS + N R L +
Sbjct: 248 LRGL-NVAEVQKSEFSCSGQGEAGRVPTCTLSSGSCPAMCTCSNGIVDCRGKGLTAIPAN 306
Query: 289 --DKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSH 346
+ +T + N I + +F L +DL++N+I ++ + L +L +L L
Sbjct: 307 LPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYG 366
Query: 347 NFLRALTQDLITPLKSLQELRLDDNDIS-MEPECIYVGFNTMDLELIY 393
N + L + + L +LQ L L+ N I+ + P+ + + L +Y
Sbjct: 367 NKITDLPRGVFGGLYTLQLLLLNANKINCIRPDA-FQDLQNLSLLSLY 413
Score = 118 (46.6 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 33/103 (32%), Positives = 53/103 (51%)
Query: 221 LRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSV 280
L L GN+ T+ V L + + +DLS+N ++ L S+ +S L L +++N +
Sbjct: 766 LYLDGNQFTL-VPGQLSTFKYLQLVDLSNNKISS-LSNSSFTNMSQLTTLILSYNALQCI 823
Query: 281 RRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 323
A GL L LS H N I L++ F +++LSHL + N
Sbjct: 824 PPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAIGAN 866
Score = 118 (46.6 bits), Expect = 6.4e-06, Sum P(2) = 6.4e-06
Identities = 36/128 (28%), Positives = 59/128 (46%)
Query: 199 LSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGP 258
L N + ++ +P LR + L N++ A QGLRS+ L L N + L
Sbjct: 316 LELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITD-LPR 374
Query: 259 STVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHL 318
L +L++L + N+ + +R A L L+ LS + N+I L +F +L + L
Sbjct: 375 GVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTL 434
Query: 319 DLAHNRIV 326
LA N +
Sbjct: 435 HLAQNPFI 442
Score = 116 (45.9 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 36/105 (34%), Positives = 57/105 (54%)
Query: 287 GLDK-LTSLSCHHNQIDVLEDHSFRALSTLSHL---DLAHNRIVAVSGASLAHLSNLTTL 342
G+ K +T L NQ ++ LST +L DL++N+I ++S +S ++S LTTL
Sbjct: 758 GIPKNVTELYLDGNQFTLVPGQ----LSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTL 813
Query: 343 DLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTM 387
LS+N L+ + L+SL+ L L NDIS E I+ ++
Sbjct: 814 ILSYNALQCIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSL 858
Score = 95 (38.5 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 30/116 (25%), Positives = 55/116 (47%)
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 317
P +P+ ++ L + NQF+ V G L+ L + +N+I L + SF +S L+
Sbjct: 756 PKGIPK--NVTELYLDGNQFTLVP-GQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTT 812
Query: 318 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 373
L L++N + + + L +L L L N + L + + + SL L + N +
Sbjct: 813 LILSYNALQCIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAIGANPL 868
Score = 78 (32.5 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 645 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
+S+ L + NQ S+R G GLD L +L +N+I + + SF+ +
Sbjct: 589 ASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGL 636
Score = 71 (30.1 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 16/77 (20%), Positives = 37/77 (48%)
Query: 618 VAQQEDDINRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCH 677
+ Q ++ NN++ ++ L+ LK +++++N+ S + GA G ++ L
Sbjct: 538 IPQSTAELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLT 597
Query: 678 HNQIDVLEDHSFSNVIG 694
NQ++ + F + G
Sbjct: 598 ANQLESIRSGMFRGLDG 614
Score = 66 (28.3 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
+S L L +++N + A GL L LS H N I L++ F++V
Sbjct: 807 MSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADV 855
Score = 63 (27.2 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 20/75 (26%), Positives = 34/75 (45%)
Query: 315 LSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 374
++ L L N+ V G L+ L +DLS+N + +L+ T + L L L N +
Sbjct: 763 VTELYLDGNQFTLVPG-QLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQ 821
Query: 375 MEPECIYVGFNTMDL 389
P + G ++ L
Sbjct: 822 CIPPLAFQGLRSLRL 836
Score = 62 (26.9 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L+ L + +N+ S + + GL + LS + NQI + +F +
Sbjct: 612 LDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQITTVSPGAFDTL 660
Score = 57 (25.1 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L +L++L + N+ + +R A L L+ LS + N+I L +F+++
Sbjct: 380 LYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSL 428
Score = 54 (24.1 bits), Expect = 8.3e-08, Sum P(2) = 8.3e-08
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L SL L + N+ + + RG GL L L + N+I+ + +F ++
Sbjct: 356 LRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDL 404
Score = 50 (22.7 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 11/32 (34%), Positives = 21/32 (65%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLS 675
L ++++LS+ NQ ++V GA L L++L+
Sbjct: 636 LRNVRLLSLYDNQITTVSPGAFDTLQSLSTLN 667
Score = 46 (21.3 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 655 NQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
NQF+ V G L+ L + +N+I L + SF+N+
Sbjct: 771 NQFTLVP-GQLSTFKYLQLVDLSNNKISSLSNSSFTNM 807
>ZFIN|ZDB-GENE-050522-43 [details] [associations]
symbol:vasna "vasorin a" species:7955 "Danio rerio"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR003961 PROSITE:PS50026 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 SMART:SM00181 ZFIN:ZDB-GENE-050522-43
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR000372 SMART:SM00013
HOVERGEN:HBG084318 EMBL:AY838878 IPI:IPI01006442 UniGene:Dr.83310
ProteinModelPortal:Q3MKM9 IntAct:Q3MKM9 InParanoid:Q3MKM9
Uniprot:Q3MKM9
Length = 688
Score = 210 (79.0 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 78/274 (28%), Positives = 127/274 (46%)
Query: 102 CTLSNVTVLPGKFLEGVTLHG--LVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVP 159
C N+ +P G+ G L + ++ + F+ L L+ L L N LS +P
Sbjct: 38 CVQRNLIYMP----RGLPSTGKQLYVFQNKINILQQQDFVELGE-LEMLDLSQNSLSEIP 92
Query: 160 TSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLR 219
+PL+ +L LDLS N + + SF GL +L L L N + + L L
Sbjct: 93 DGVFSPLS-SLHNLDLSSNYITHISKDSFIGLVNLERLYLYSNIIQNIHPAAFEGLENLL 151
Query: 220 VLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTV--PRLSSLKVLSIAHNQF 277
L+LQGN+ +SV+ ALQ L + LDLS+N + PL + P L SLK+ +
Sbjct: 152 ELKLQGNQ--ISVLPALQ-LPRLLHLDLSYNSIP-PLVAQDLQTPHLESLKIAGLG---L 204
Query: 278 SSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLS 337
+S+ L L L L NQ+ ++ + +++ L +L+L N + ++ +L
Sbjct: 205 TSLDEELLGSLVNLHVLDVSQNQLVDIQP-TLKSMGGLRNLNLTGNPLGSLKHEDFQNLV 263
Query: 338 NLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
NL LDLS+ L+ + L++L +N
Sbjct: 264 NLLELDLSNLNLQGFPEGFFNLFPKLEKLTAAEN 297
Score = 176 (67.0 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 69/239 (28%), Positives = 114/239 (47%)
Query: 140 GLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDL 199
GL S + L + N ++++ L L+ LDLS N L ++ + F LSSL+ LDL
Sbjct: 49 GLPSTGKQLYVFQNKINILQQQDFVELG-ELEMLDLSQNSLSEIPDGVFSPLSSLHNLDL 107
Query: 200 SYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPS 259
S N + +S+D LV L L L N + AA +GL ++ +L L N ++ L
Sbjct: 108 SSNYITHISKDSFIGLVNLERLYLYSNIIQNIHPAAFEGLENLLELKLQGNQIS-VLPAL 166
Query: 260 TVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 319
+PRL L +++N + L L SL + L++ +L L LD
Sbjct: 167 QLPRLLHL---DLSYNSIPPLVAQDLQ-TPHLESLKIAGLGLTSLDEELLGSLVNLHVLD 222
Query: 320 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPE 378
++ N++V + +L + L L+L+ N L +L + L +L EL L + ++ PE
Sbjct: 223 VSQNQLVDIQ-PTLKSMGGLRNLNLTGNPLGSLKHEDFQNLVNLLELDLSNLNLQGFPE 280
Score = 127 (49.8 bits), Expect = 0.00018, P = 0.00018
Identities = 52/185 (28%), Positives = 86/185 (46%)
Query: 212 LAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLS 271
L+PL L +L+L L+ L S + NL+ P G +P S+ K L
Sbjct: 4 LSPLSHLILLQLLCGCLSSRCPHDCTCLPSNNIFCVQRNLIYMPRG---LP--STGKQLY 58
Query: 272 IAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGA 331
+ N+ + +++ L +L L N + + D F LS+L +LDL+ N I +S
Sbjct: 59 VFQNKINILQQQDFVELGELEMLDLSQNSLSEIPDGVFSPLSSLHNLDLSSNYITHISKD 118
Query: 332 SLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLEL 391
S L NL L L N ++ + L++L EL+L N IS+ P + + + L+L
Sbjct: 119 SFIGLVNLERLYLYSNIIQNIHPAAFEGLENLLELKLQGNQISVLP-ALQLP-RLLHLDL 176
Query: 392 IYSGV 396
Y+ +
Sbjct: 177 SYNSI 181
>UNIPROTKB|Q9GZU5 [details] [associations]
symbol:NYX "Nyctalopin" species:9606 "Homo sapiens"
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0007601
"visual perception" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005622 "intracellular" evidence=IDA]
GO:GO:0007601 GO:GO:0005578 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0050896 GO:GO:0005622
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 EMBL:CH471141
Orphanet:215 EMBL:Z93015 EMBL:AJ278865 EMBL:AF254868 EMBL:BC112242
IPI:IPI00072576 RefSeq:NP_072089.1 UniGene:Hs.302019
ProteinModelPortal:Q9GZU5 SMR:Q9GZU5 STRING:Q9GZU5
PhosphoSite:Q9GZU5 DMDM:23396778 PRIDE:Q9GZU5 DNASU:60506
Ensembl:ENST00000342595 Ensembl:ENST00000378220 GeneID:60506
KEGG:hsa:60506 UCSC:uc004dfh.2 CTD:60506 GeneCards:GC0XP041306
HGNC:HGNC:8082 MIM:300278 MIM:310500 neXtProt:NX_Q9GZU5
PharmGKB:PA31871 eggNOG:NOG328516 HOGENOM:HOG000230477
HOVERGEN:HBG031762 InParanoid:Q9GZU5 KO:K08129 OMA:NISFITP
OrthoDB:EOG43JC4W PhylomeDB:Q9GZU5 GenomeRNAi:60506 NextBio:65415
Bgee:Q9GZU5 CleanEx:HS_NYX Genevestigator:Q9GZU5
GermOnline:ENSG00000188937 Uniprot:Q9GZU5
Length = 481
Score = 207 (77.9 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 83/283 (29%), Positives = 129/283 (45%)
Query: 95 ERVSLLDCTLSNVTVLPGKF-LEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNN 153
ER + C + + +P + E V++ + L+ + + AF L S L+ L L +N
Sbjct: 41 ERGCSVRCDRAGLLRVPAELPCEAVSID---LDRNGLRFLGERAFGTLPS-LRRLSLRHN 96
Query: 154 LLSVVPTSALAPLAPNLDRLDLSHN-QLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCL 212
LS + A L P L L L+HN L L +F LS L LDL+ +L ++ + L
Sbjct: 97 NLSFITPGAFKGL-PRLAELRLAHNGDLRYLHARTFAALSRLRRLDLAACRLFSVPERLL 155
Query: 213 APLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSI 272
A L LR L N L V AL+GL ++T L + + S++ L L+ LS+
Sbjct: 156 AELPALRELAAFDN-LFRRVPGALRGLANLTHAHLERGRIEA-VASSSLQGLRRLRSLSL 213
Query: 273 AHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGAS 332
N+ +V GA L L + N + L +FR L L L+L N + V+ A
Sbjct: 214 QANRVRAVHAGAFGDCGVLEHLLLNDNLLAELPADAFRGLRRLRTLNLGGNALDRVARAW 273
Query: 333 LAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISM 375
A L+ L L L N + + + L L L L+ N +++
Sbjct: 274 FADLAELELLYLDRNSIAFVEEGAFQNLSGLLALHLNGNRLTV 316
Score = 177 (67.4 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 72/236 (30%), Positives = 104/236 (44%)
Query: 147 ALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYN-KLM 205
++ L N L + A L P+L RL L HN L + +FKGL L L L++N L
Sbjct: 66 SIDLDRNGLRFLGERAFGTL-PSLRRLSLRHNNLSFITPGAFKGLPRLAELRLAHNGDLR 124
Query: 206 TLSQDCLAPLVTLRVLRLQGNRL-TVS--VVAALQGLRSVTDLDLSHNLLAGPLGPSTVP 262
L A L LR L L RL +V ++A L LR + D NL P +
Sbjct: 125 YLHARTFAALSRLRRLDLAACRLFSVPERLLAELPALRELAAFD---NLFRRV--PGALR 179
Query: 263 RLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 322
L++L + + +V +L GL +L SLS N++ + +F L HL L
Sbjct: 180 GLANLTHAHLERGRIEAVASSSLQGLRRLRSLSLQANRVRAVHAGAFGDCGVLEHLLLND 239
Query: 323 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPE 378
N + + + L L TL+L N L + + L L+ L LD N I+ E
Sbjct: 240 NLLAELPADAFRGLRRLRTLNLGGNALDRVARAWFADLAELELLYLDRNSIAFVEE 295
Score = 172 (65.6 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 59/191 (30%), Positives = 87/191 (45%)
Query: 197 LDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPL 256
+DL N L L + L +LR L L+ N L+ A +GL + +L L+HN L
Sbjct: 67 IDLDRNGLRFLGERAFGTLPSLRRLSLRHNNLSFITPGAFKGLPRLAELRLAHNGDLRYL 126
Query: 257 GPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLS 316
T LS L+ L +A + SV LA L L L+ N + + R L+ L+
Sbjct: 127 HARTFAALSRLRRLDLAACRLFSVPERLLAELPALRELAAFDNLFRRVPG-ALRGLANLT 185
Query: 317 HLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISME 376
H L RI AV+ +SL L L +L L N +RA+ L+ L L+DN ++
Sbjct: 186 HAHLERGRIEAVASSSLQGLRRLRSLSLQANRVRAVHAGAFGDCGVLEHLLLNDNLLAEL 245
Query: 377 PECIYVGFNTM 387
P + G +
Sbjct: 246 PADAFRGLRRL 256
Score = 170 (64.9 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 80/269 (29%), Positives = 118/269 (43%)
Query: 68 LPHTLRCTA-----NKSDLYAISESLRGLEPD-ERVSLLDCTLSNVTVLPGKFLEGVTLH 121
+P L C A +++ L + E G P R+SL LS +T PG F L
Sbjct: 56 VPAELPCEAVSIDLDRNGLRFLGERAFGTLPSLRRLSLRHNNLSFIT--PGAFKGLPRLA 113
Query: 122 GLVIS-SGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQL 180
L ++ +G+L+ + F LS L+ L L L VP LA L P L L N L
Sbjct: 114 ELRLAHNGDLRYLHARTFAALSR-LRRLDLAACRLFSVPERLLAEL-PALRELAAFDN-L 170
Query: 181 YKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLR 240
++ + +GL++L L ++ ++ L L LR L LQ NR+ A
Sbjct: 171 FRRVPGALRGLANLTHAHLERGRIEAVASSSLQGLRRLRSLSLQANRVRAVHAGAFGDCG 230
Query: 241 SVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQ 300
+ L L+ NLLA L L L+ L++ N V R A L +L L N
Sbjct: 231 VLEHLLLNDNLLA-ELPADAFRGLRRLRTLNLGGNALDRVARAWFADLAELELLYLDRNS 289
Query: 301 IDVLEDHSFRALSTLSHLDLAHNRIVAVS 329
I +E+ +F+ LS L L L NR+ ++
Sbjct: 290 IAFVEEGAFQNLSGLLALHLNGNRLTVLA 318
Score = 123 (48.4 bits), Expect = 0.00029, P = 0.00029
Identities = 51/173 (29%), Positives = 76/173 (43%)
Query: 67 DLPHTLRCTANKSDLYA-ISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVT-LHGLV 124
+LP LR A +L+ + +LRGL L + + L+G+ L L
Sbjct: 157 ELP-ALRELAAFDNLFRRVPGALRGLANLTHAHL---ERGRIEAVASSSLQGLRRLRSLS 212
Query: 125 ISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLE 184
+ + ++ + GAF G L+ L L +NLL+ +P A L L L+L N L ++
Sbjct: 213 LQANRVRAVHAGAF-GDCGVLEHLLLNDNLLAELPADAFRGLR-RLRTLNLGGNALDRVA 270
Query: 185 NTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQ 237
F L+ L L L N + + + L L L L GNRLTV A Q
Sbjct: 271 RAWFADLAELELLYLDRNSIAFVEEGAFQNLSGLLALHLNGNRLTVLAWVAFQ 323
Score = 61 (26.5 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 19/66 (28%), Positives = 30/66 (45%)
Query: 630 SDSRYVKLQATTIL-LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHS 688
+D+ +L A L L+ L++ N V R A L +L L N I +E+ +
Sbjct: 238 NDNLLAELPADAFRGLRRLRTLNLGGNALDRVARAWFADLAELELLYLDRNSIAFVEEGA 297
Query: 689 FSNVIG 694
F N+ G
Sbjct: 298 FQNLSG 303
>UNIPROTKB|Q5I2M8 [details] [associations]
symbol:TLR9 "Toll-like receptor 9" species:9615 "Canis
lupus familiaris" [GO:0005768 "endosome" evidence=ISS] [GO:0032009
"early phagosome" evidence=ISS] [GO:0005764 "lysosome"
evidence=ISS] [GO:0005783 "endoplasmic reticulum" evidence=ISS]
[GO:0035197 "siRNA binding" evidence=ISS] [GO:0045359 "positive
regulation of interferon-beta biosynthetic process" evidence=ISS]
[GO:0045356 "positive regulation of interferon-alpha biosynthetic
process" evidence=ISS] [GO:0045078 "positive regulation of
interferon-gamma biosynthetic process" evidence=ISS] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0051770
"positive regulation of nitric-oxide synthase biosynthetic process"
evidence=IEA] [GO:0051607 "defense response to virus" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0032760 "positive
regulation of tumor necrosis factor production" evidence=IEA]
[GO:0032755 "positive regulation of interleukin-6 production"
evidence=IEA] [GO:0032741 "positive regulation of interleukin-18
production" evidence=IEA] [GO:0032735 "positive regulation of
interleukin-12 production" evidence=IEA] [GO:0032733 "positive
regulation of interleukin-10 production" evidence=IEA] [GO:0032728
"positive regulation of interferon-beta production" evidence=IEA]
[GO:0032715 "negative regulation of interleukin-6 production"
evidence=IEA] [GO:0030277 "maintenance of gastrointestinal
epithelium" evidence=IEA] [GO:0045087 "innate immune response"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0006954 "inflammatory response" evidence=IEA] [GO:0050729
"positive regulation of inflammatory response" evidence=IEA]
[GO:0050707 "regulation of cytokine secretion" evidence=IEA]
[GO:0034162 "toll-like receptor 9 signaling pathway" evidence=IEA]
[GO:0004888 "transmembrane signaling receptor activity"
evidence=IEA] [GO:0002755 "MyD88-dependent toll-like receptor
signaling pathway" evidence=IEA] [GO:0002237 "response to molecule
of bacterial origin" evidence=IEA] InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR027181 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51450 GO:GO:0005783 GO:GO:0016021 GO:GO:0005886
GO:GO:0007165 GO:GO:0005789 GO:GO:0005768 GO:GO:0006954
GO:GO:0045944 InterPro:IPR003591 SMART:SM00369 GO:GO:0045087
GO:GO:0032755 GO:GO:0030277 GO:GO:0005764 GO:GO:0051607
GO:GO:0050727 GO:GO:0032715 GO:GO:0032009 GO:GO:0035197
GO:GO:0032760 GO:GO:0032735 GO:GO:0051770 GO:GO:0045078
GO:GO:0032733 GO:GO:0032728 SUPFAM:SSF52200 GO:GO:0045359
GeneTree:ENSGT00680000099674 GO:GO:0032741 GO:GO:0045356
HOGENOM:HOG000230468 HOVERGEN:HBG018601 eggNOG:NOG244295
OrthoDB:EOG47SSDD PANTHER:PTHR24373:SF37 EMBL:AY859723
UniGene:Cfa.824 ProteinModelPortal:Q5I2M8 STRING:Q5I2M8
Ensembl:ENSCAFT00000035532 OMA:VGGNCRR Uniprot:Q5I2M8
Length = 1032
Score = 212 (79.7 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 93/302 (30%), Positives = 142/302 (47%)
Query: 100 LDCTLSN-VTVLPGKFLEGVTLHGLVISSGELKNISDGA-FIGLSSPLQALGLPNNLLSV 157
LD + +N VTV P F+ L L +S + +G+ F+ LS+ L+ L L +N L +
Sbjct: 479 LDLSRNNLVTVQPEMFVRLARLQCLGLSHNSISQAVNGSQFVPLSN-LRVLDLSHNKLDL 537
Query: 158 VPTSALAPLAPNLDRLDLSHN-QLYKLE----NTSFKG-LSSLNFLDLSYNKLMT-LSQD 210
+ L P L+ LDLS+N Q + + N SF L +L +L L++N + + +SQ
Sbjct: 538 YHGRSFTEL-PRLEALDLSYNSQPFSMRGVGHNLSFVAQLPALRYLSLAHNGIHSRVSQQ 596
Query: 211 CLAPLVTLRVLRLQGNRLTVS------VVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRL 264
+ +LR L GN L+ + QGLRS+ LDLS N L L P + L
Sbjct: 597 LRS--ASLRALDFSGNTLSQMWAEGDLYLRFFQGLRSLVQLDLSQNRLHTLL-PRNLDNL 653
Query: 265 -SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 323
SL++L + N + +LA L KL +L NQ+ L + S + L LDL+ N
Sbjct: 654 PKSLRLLRLRDNYLAFFNWSSLALLPKLEALDLAGNQLKALSNGSLPNGTQLQRLDLSGN 713
Query: 324 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLK-SLQELRLDDNDISMEPECIYV 382
I V + A L L+LS N L+ + L +L+ L + N + +V
Sbjct: 714 SIGFVVPSFFALAVRLRELNLSANALKTVEPSWFGSLAGALKVLDVTANPLHCACGATFV 773
Query: 383 GF 384
F
Sbjct: 774 DF 775
Score = 171 (65.3 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 86/277 (31%), Positives = 116/277 (41%)
Query: 120 LHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLL--SVVPTSALAPLAPNLDRLDLSH 177
L GLV+ L ++ F GL + L L L N L + T A LA L RL+LS
Sbjct: 286 LEGLVLRDSSLYSLDPRWFHGLGN-LMVLDLSENFLYDCITKTKAFYGLA-RLRRLNLSF 343
Query: 178 NQLYKLE------NTSFKGLSSLNFLDLS---YNKLMTLSQDCLAPLVTLRVLRLQGNRL 228
N K+ +SF L SL LD+ + L + LA L L+ L LQ N +
Sbjct: 344 NYHKKVSFAHLHLASSFGSLLSLQELDIHGIFFRSLSKTTLQSLAHLPMLQRLHLQLNFI 403
Query: 229 T---VSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGAL 285
+ +S+ A GLR V DLS N ++G P+ Q + G L
Sbjct: 404 SQAQLSIFGAFPGLRYV---DLSDNRISGAAEPAAATGEVEADCGERVWPQSRDLALGPL 460
Query: 286 A--GLDKLT--------SLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV-AVSGASLA 334
G + +L N + ++ F L+ L L L+HN I AV+G+
Sbjct: 461 GTPGSEAFMPSCRTLNFTLDLSRNNLVTVQPEMFVRLARLQCLGLSHNSISQAVNGSQFV 520
Query: 335 HLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
LSNL LDLSHN L T L L+ L L N
Sbjct: 521 PLSNLRVLDLSHNKLDLYHGRSFTELPRLEALDLSYN 557
Score = 132 (51.5 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 72/237 (30%), Positives = 104/237 (43%)
Query: 155 LSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGL-SSLNFLDLSYNKLMTLSQDCLA 213
+++ P + LA P L+ L+LS+N + T+ L SSL L LS ++ L LA
Sbjct: 112 MTIEPNTFLA--VPTLEDLNLSYNSI-----TTVPALPSSLVSLSLSRTNILVLDPATLA 164
Query: 214 PLVTLRVLRLQGN-------RLTVSVV-AALQGLRSVTDLDLSHNLLAGPLGPSTVPRLS 265
L LR L L GN + + V AL GL ++T L L +N L + P +P
Sbjct: 165 GLYALRFLFLDGNCYYKNPCQQALQVAPGALLGLGNLTHLSLKYNNLT--VVPRGLP--P 220
Query: 266 SLKVLSIAHNQFSSVRRGALAGLDKLTSLS-------CHHNQ---------IDVLEDHSF 309
SL+ L +++N ++ LA L L L C H + L ++F
Sbjct: 221 SLEYLLLSYNHIITLAPEDLANLTALRVLDVGGNCRRCDHARNPCRECPKGFPQLHPNTF 280
Query: 310 RALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQEL 366
LS L L L + + ++ L NL LDLS NFL D IT K+ L
Sbjct: 281 GHLSHLEGLVLRDSSLYSLDPRWFHGLGNLMVLDLSENFL----YDCITKTKAFYGL 333
Score = 129 (50.5 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 88/303 (29%), Positives = 129/303 (42%)
Query: 100 LDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVP 159
L+ + +++T +P L +L L +S + + GL + L+ L L N P
Sbjct: 128 LNLSYNSITTVPA--LPS-SLVSLSLSRTNILVLDPATLAGLYA-LRFLFLDGNCYYKNP 183
Query: 160 TSALAPLAPN--LDRLDLSHNQLYKLENTSF--KGLS-SLNFLDLSYNKLMTLSQDCLAP 214
+AP L +L+H L K N + +GL SL +L LSYN ++TL+ + LA
Sbjct: 184 CQQALQVAPGALLGLGNLTHLSL-KYNNLTVVPRGLPPSLEYLLLSYNHIITLAPEDLAN 242
Query: 215 LVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGP-LGPSTVPRLSSLKVLSIA 273
L LRVL + GN A R P L P+T LS L+ L +
Sbjct: 243 LTALRVLDVGGNCRRCD--HARNPCRECPK--------GFPQLHPNTFGHLSHLEGLVLR 292
Query: 274 HNQFSSVRRGALAGLDKLTSLSCHHNQI-D-VLEDHSFRALSTLSHLDLAHNRIVAVSGA 331
+ S+ GL L L N + D + + +F L+ L L+L+ N VS A
Sbjct: 293 DSSLYSLDPRWFHGLGNLMVLDLSENFLYDCITKTKAFYGLARLRRLNLSFNYHKKVSFA 352
Query: 332 SLAHLSN-------LTTLDLSHNFLRAL---TQDLITPLKSLQELRLDDNDISMEPECIY 381
L HL++ L LD+ F R+L T + L LQ L L N IS I+
Sbjct: 353 HL-HLASSFGSLLSLQELDIHGIFFRSLSKTTLQSLAHLPMLQRLHLQLNFISQAQLSIF 411
Query: 382 VGF 384
F
Sbjct: 412 GAF 414
Score = 128 (50.1 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 82/305 (26%), Positives = 127/305 (41%)
Query: 83 AISESLRGLEPDE-RVSLLD-CTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIG 140
A+ SL L + +LD TL+ + L FL+G + + ++ GA +G
Sbjct: 140 ALPSSLVSLSLSRTNILVLDPATLAGLYALRFLFLDGNCYYKNPCQ--QALQVAPGALLG 197
Query: 141 LSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLS 200
L + L L L N L+VVP L P+L+ L LS+N + L L++L LD+
Sbjct: 198 LGN-LTHLSLKYNNLTVVPRG----LPPSLEYLLLSYNHIITLAPEDLANLTALRVLDVG 252
Query: 201 YNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPST 260
N + C R +L + L L + D S L + L P
Sbjct: 253 GN-----CRRCDHARNPCRECPKGFPQLHPNTFGHLSHLEGLVLRDSS--LYS--LDPRW 303
Query: 261 VPRLSSLKVLSIAHN-QFSSVRRG-ALAGLDKLTSLSC---HHNQIDVLEDH---SFRAL 312
L +L VL ++ N + + + A GL +L L+ +H ++ H SF +L
Sbjct: 304 FHGLGNLMVLDLSENFLYDCITKTKAFYGLARLRRLNLSFNYHKKVSFAHLHLASSFGSL 363
Query: 313 STLSHLDLAHNRIVAVSGA---SLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLD 369
+L LD+ ++S SLAHL L L L NF+ + L+ + L
Sbjct: 364 LSLQELDIHGIFFRSLSKTTLQSLAHLPMLQRLHLQLNFISQAQLSIFGAFPGLRYVDLS 423
Query: 370 DNDIS 374
DN IS
Sbjct: 424 DNRIS 428
Score = 75 (31.5 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 21/71 (29%), Positives = 35/71 (49%)
Query: 624 DINRNNSDSRYVKLQATTIL-LSSLKVLSIAHNQFSSVRRGA-LAGLDKLTSLSCHHNQI 681
D++RNN V +Q + L+ L+ L ++HN S G+ L L L HN++
Sbjct: 480 DLSRNN----LVTVQPEMFVRLARLQCLGLSHNSISQAVNGSQFVPLSNLRVLDLSHNKL 535
Query: 682 DVLEDHSFSNV 692
D+ SF+ +
Sbjct: 536 DLYHGRSFTEL 546
Score = 55 (24.4 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 643 LLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSN 691
L SL++L + N + +LA L KL +L NQ+ L + S N
Sbjct: 653 LPKSLRLLRLRDNYLAFFNWSSLALLPKLEALDLAGNQLKALSNGSLPN 701
Score = 54 (24.1 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 15/52 (28%), Positives = 28/52 (53%)
Query: 628 NNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 679
+NS S+ V + + LS+L+VL ++HN+ + L +L +L +N
Sbjct: 507 HNSISQAVN-GSQFVPLSNLRVLDLSHNKLDLYHGRSFTELPRLEALDLSYN 557
Score = 50 (22.7 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 643 LLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
LL L+ L +A NQ ++ G+L +L L N I
Sbjct: 677 LLPKLEALDLAGNQLKALSNGSLPNGTQLQRLDLSGNSI 715
Score = 40 (19.1 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 644 LSSLKVLSIAHNQFSS-----VRRGALAGLD 669
L +L+ LS+AHN S +R +L LD
Sbjct: 576 LPALRYLSLAHNGIHSRVSQQLRSASLRALD 606
>TAIR|locus:2012433 [details] [associations]
symbol:AT1G68780 species:3702 "Arabidopsis thaliana"
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0007165 "signal
transduction" evidence=IC;RCA] [GO:0002237 "response to molecule of
bacterial origin" evidence=RCA] [GO:0010103 "stomatal complex
morphogenesis" evidence=RCA] [GO:0048443 "stamen development"
evidence=RCA] Pfam:PF00560 InterPro:IPR001611 EMBL:CP002684
GenomeReviews:CT485782_GR EMBL:AC011914 InterPro:IPR025875
Pfam:PF12799 eggNOG:NOG322254 HOGENOM:HOG000083023
ProtClustDB:CLSN2684684 EMBL:AF361616 EMBL:BT015777 IPI:IPI00526498
PIR:E96712 RefSeq:NP_564942.1 UniGene:At.43501
ProteinModelPortal:Q9CA41 SMR:Q9CA41 EnsemblPlants:AT1G68780.1
GeneID:843209 KEGG:ath:AT1G68780 TAIR:At1g68780 InParanoid:Q9CA41
OMA:ISGELEF PhylomeDB:Q9CA41 Genevestigator:Q9CA41 Uniprot:Q9CA41
Length = 432
Score = 205 (77.2 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 79/257 (30%), Positives = 120/257 (46%)
Query: 151 PNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTS-FKGLSSLNFLDLSYNKLMTLSQ 209
PN L+ + L+ +L+RL++ N E S L++L L + NKL
Sbjct: 130 PNRYLASISDEKWLDLSKSLERLEIRSNPGLIGELPSVITNLTNLQSLVVLENKLTGPLP 189
Query: 210 DCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKV 269
LA L LR L L GNR T + + GL + LD+S N L+G L P +V L SL
Sbjct: 190 VNLAKLTRLRRLVLSGNRFT-GRIPEVYGLTGLLILDVSRNFLSGAL-PLSVGGLYSLLK 247
Query: 270 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVA-V 328
L +++N L L LT L +N++ + +++L L L++NR+ +
Sbjct: 248 LDLSNNYLEGKLPRELESLKNLTLLDLRNNRLSGGLSKEIQEMTSLVELVLSNNRLAGDL 307
Query: 329 SGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS------MEPE---- 378
+G +L NL LDLS+ L+ I LK L+ L L +N++ ME E
Sbjct: 308 TGIKWRNLKNLVVLDLSNTGLKGEIPGSILELKKLRFLGLSNNNLGGKLIPQMETEMPSL 367
Query: 379 -CIYVGFNTMDLELIYS 394
+YV N + EL +S
Sbjct: 368 SALYVNGNNISGELEFS 384
>UNIPROTKB|O15455 [details] [associations]
symbol:TLR3 "Toll-like receptor 3" species:9606 "Homo
sapiens" [GO:0006954 "inflammatory response" evidence=IEA]
[GO:0034346 "positive regulation of type III interferon production"
evidence=IEA] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0045080 "positive regulation of
chemokine biosynthetic process" evidence=IEA] [GO:0046330 "positive
regulation of JNK cascade" evidence=IEA] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=IEA] [GO:0007250 "activation of NF-kappaB-inducing kinase
activity" evidence=NAS] [GO:0016020 "membrane" evidence=NAS]
[GO:0004888 "transmembrane signaling receptor activity"
evidence=NAS] [GO:0006972 "hyperosmotic response" evidence=NAS]
[GO:0003725 "double-stranded RNA binding" evidence=IDA;NAS]
[GO:0045671 "negative regulation of osteoclast differentiation"
evidence=NAS] [GO:0045078 "positive regulation of interferon-gamma
biosynthetic process" evidence=IDA] [GO:0045356 "positive
regulation of interferon-alpha biosynthetic process" evidence=IDA]
[GO:0045359 "positive regulation of interferon-beta biosynthetic
process" evidence=IMP;IDA] [GO:0009597 "detection of virus"
evidence=NAS] [GO:0071260 "cellular response to mechanical
stimulus" evidence=IEP] [GO:0042742 "defense response to bacterium"
evidence=TAS] [GO:0004872 "receptor activity" evidence=TAS]
[GO:0005887 "integral to plasma membrane" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] [GO:0000139 "Golgi membrane"
evidence=TAS] [GO:0002756 "MyD88-independent toll-like receptor
signaling pathway" evidence=TAS] [GO:0005789 "endoplasmic reticulum
membrane" evidence=TAS] [GO:0007249 "I-kappaB kinase/NF-kappaB
cascade" evidence=TAS] [GO:0008063 "Toll signaling pathway"
evidence=TAS] [GO:0010008 "endosome membrane" evidence=TAS]
[GO:0034138 "toll-like receptor 3 signaling pathway" evidence=TAS]
[GO:0034142 "toll-like receptor 4 signaling pathway" evidence=TAS]
[GO:0035666 "TRIF-dependent toll-like receptor signaling pathway"
evidence=TAS] [GO:0036020 "endolysosome membrane" evidence=TAS]
[GO:0045087 "innate immune response" evidence=TAS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0032735 "positive regulation of
interleukin-12 production" evidence=ISS] [GO:0032760 "positive
regulation of tumor necrosis factor production" evidence=ISS]
[GO:0051607 "defense response to virus" evidence=TAS] [GO:0032728
"positive regulation of interferon-beta production" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0042346 "positive
regulation of NF-kappaB import into nucleus" evidence=IDA]
[GO:0007252 "I-kappaB phosphorylation" evidence=IDA] [GO:0032722
"positive regulation of chemokine production" evidence=IDA]
[GO:0009986 "cell surface" evidence=IDA] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IDA] [GO:0034123
"positive regulation of toll-like receptor signaling pathway"
evidence=IDA] [GO:0032757 "positive regulation of interleukin-8
production" evidence=IDA] [GO:0050729 "positive regulation of
inflammatory response" evidence=IC] InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 Reactome:REACT_6900 GO:GO:0000139
GO:GO:0005887 GO:GO:0005789 GO:GO:0043123 GO:GO:0042742
GO:GO:0006954 GO:GO:0046330 GO:GO:0045944 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0045087 GO:GO:0032722 GO:GO:0032755 GO:GO:0050729
GO:GO:0051607 GO:GO:0006972 GO:GO:0008584 GO:GO:0043065
GO:GO:0035690 EMBL:CH471056 GO:GO:0003725 GO:GO:0051092
GO:GO:0032757 GO:GO:0071260 GO:GO:0071346 GO:GO:0035458
InterPro:IPR000372 SMART:SM00013 GO:GO:0007250 GO:GO:0004888
GO:GO:0032760 GO:GO:0008063 GO:GO:0034138 GO:GO:0034142
GO:GO:0035666 GO:GO:0052033 GO:GO:0045671 GO:GO:0032735
GO:GO:0042346 GO:GO:0045078 GO:GO:0002282 GO:GO:0032728
GO:GO:0009597 GO:GO:0007252 GO:GO:0045080 SUPFAM:SSF52200
GO:GO:0071360 GO:GO:0045359 Orphanet:1930 GO:GO:0034123 CTD:7098
HOVERGEN:HBG023181 KO:K05401 OrthoDB:EOG4N30N8
PANTHER:PTHR24365:SF5 EMBL:U88879 EMBL:DQ445682 EMBL:AB445631
EMBL:BC096333 EMBL:BC096334 EMBL:BC096335 IPI:IPI00019007
RefSeq:NP_003256.1 UniGene:Hs.657724 PDB:1ZIW PDB:2A0Z PDB:3ULU
PDB:3ULV PDBsum:1ZIW PDBsum:2A0Z PDBsum:3ULU PDBsum:3ULV
ProteinModelPortal:O15455 SMR:O15455 DIP:DIP-29660N IntAct:O15455
MINT:MINT-2840066 STRING:O15455 PhosphoSite:O15455 PaxDb:O15455
PRIDE:O15455 Ensembl:ENST00000296795 GeneID:7098 KEGG:hsa:7098
UCSC:uc003iyq.3 GeneCards:GC04P186990 HGNC:HGNC:11849 HPA:CAB025658
MIM:603029 MIM:613002 neXtProt:NX_O15455 PharmGKB:PA36551
HOGENOM:HOG000251618 InParanoid:O15455 OMA:IANINDD PhylomeDB:O15455
ChEMBL:CHEMBL1075113 EvolutionaryTrace:O15455 GenomeRNAi:7098
NextBio:27769 ArrayExpress:O15455 Bgee:O15455 CleanEx:HS_TLR3
Genevestigator:O15455 GermOnline:ENSG00000164342 GO:GO:0036020
GO:GO:0045356 GO:GO:0034346 Uniprot:O15455
Length = 904
Score = 191 (72.3 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 64/232 (27%), Positives = 109/232 (46%)
Query: 166 LAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQG 225
L N+ L+L+HNQL +L +F S L LD+ +N + L + L L+VL LQ
Sbjct: 49 LPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQH 108
Query: 226 NRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGAL 285
N L+ ++T+L L N + + + + +L L ++HN SS + G
Sbjct: 109 NELSQLSDKTFAFCTNLTELHLMSNSIQ-KIKNNPFVKQKNLITLDLSHNGLSSTKLGTQ 167
Query: 286 AGLDKLTSLSCHHNQIDVL--EDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLD 343
L+ L L +N+I L E+ A S+L L+L+ N+I S + L L
Sbjct: 168 VQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLF 227
Query: 344 LSHNFLR-ALTQDLITPLK--SLQELRLDDNDISMEPECIYVGFNTMDLELI 392
L++ L +LT+ L L S++ L L ++ +S ++G +L ++
Sbjct: 228 LNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTML 279
Score = 182 (69.1 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 78/276 (28%), Positives = 130/276 (47%)
Query: 111 PGKFLEGVTLHGLVISSGEL-KNISDGAFIGLSSP-LQALGLPNNLLSVVPTSALAPLA- 167
PG F L GL +++ +L ++++ + L++ ++ L L N+ LS + L
Sbjct: 214 PGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKW 273
Query: 168 PNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGN- 226
NL LDLS+N L + N SF L L + L YN + L L L +R L L+ +
Sbjct: 274 TNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSF 333
Query: 227 -RLTVSVVA-------ALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFS 278
+ ++S+ + + Q L+ + L++ N + G + + L +LK LS++ N F+
Sbjct: 334 TKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPG-IKSNMFTGLINLKYLSLS-NSFT 391
Query: 279 SVR---RGALAGL--DKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI-VAVSGAS 332
S+R L L L+ N+I +E +F L L LDL N I ++G
Sbjct: 392 SLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQE 451
Query: 333 LAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRL 368
L N+ + LS+N LT++ + SLQ L L
Sbjct: 452 WRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLML 487
Score = 173 (66.0 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 78/295 (26%), Positives = 130/295 (44%)
Query: 96 RVSLLDCTLSNVTVLPGKFLEGVT-LHGLVISSGELKNISDGAFIGLSSPLQALGLPNNL 154
+++ LD + ++ L + + + L L + EL +SD F + L L L +N
Sbjct: 76 QLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTF-AFCTNLTELHLMSNS 134
Query: 155 LSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAP 214
+ + + NL LDLSHN L + + L +L L LS NK+ L + L
Sbjct: 135 IQKIKNNPFVK-QKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDI 193
Query: 215 LV--TLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGP-LGPSTVPRLS--SLKV 269
+L+ L L N++ + + L L+ N+ GP L L+ S++
Sbjct: 194 FANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLN-NVQLGPSLTEKLCLELANTSIRN 252
Query: 270 LSIAHNQFSSVRRGALAGLD--KLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVA 327
LS++++Q S+ GL LT L +N ++V+ + SF L L + L +N I
Sbjct: 253 LSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQH 312
Query: 328 VSGASLAHLSNLTTLDLSHNFLRALTQDLITP---------LKSLQELRLDDNDI 373
+ SL L N+ L+L +F + P LK L+ L ++DNDI
Sbjct: 313 LFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDI 367
Score = 173 (66.0 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 73/298 (24%), Positives = 132/298 (44%)
Query: 101 DCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPT 160
DC+ +T +P +T+ L ++ +L+ + F S L +L + N +S +
Sbjct: 36 DCSHLKLTQVPDDLPTNITV--LNLTHNQLRRLPAANFTRYSQ-LTSLDVGFNTISKLEP 92
Query: 161 SALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRV 220
L P L L+L HN+L +L + +F ++L L L N + + + L
Sbjct: 93 ELCQKL-PMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLIT 151
Query: 221 LRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPST-VPRLSSLKVLSIAHNQFSS 279
L L N L+ + + L ++ +L LS+N + + SSLK L ++ NQ
Sbjct: 152 LDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKE 211
Query: 280 VRRGALAGLDKLTSLSCHHNQI--DVLEDHSFRALST-LSHLDLAHNRIVAVSGASLAHL 336
G + +L L ++ Q+ + E +T + +L L+++++ S + L
Sbjct: 212 FSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGL 271
Query: 337 --SNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS-MEPECIYVGFNTMDLEL 391
+NLT LDLS+N L + D L L+ L+ N+I + ++ FN L L
Sbjct: 272 KWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNL 329
Score = 159 (61.0 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 74/290 (25%), Positives = 123/290 (42%)
Query: 120 LHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSV--VPTSALAPLAPN-LDRLDLS 176
L L + ++ I F GL + L+ L L N+ S+ + LA + L L+L+
Sbjct: 357 LEHLNMEDNDIPGIKSNMFTGLIN-LKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLT 415
Query: 177 HNQLYKLENTSFKGLSSLNFLDLSYNKL-MTLSQDCLAPLVTLRVLRLQGNRLTVSVVAA 235
N++ K+E+ +F L L LDL N++ L+ L + + L N+ +
Sbjct: 416 KNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNS 475
Query: 236 LQGLRSVTDLDLSHNLLAG-PLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSL 294
+ S+ L L L PS L +L +L +++N +++ L GL+KL L
Sbjct: 476 FALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEIL 535
Query: 295 SCHHNQIDVLEDHS--------FRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSH 346
HN + L H+ + LS L L+L N + L L +DL
Sbjct: 536 DLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGL 595
Query: 347 NFLRALTQDLITPLKSLQELRLDDNDI-SMEPECIYVGF-NTMDLELIYS 394
N L L + SL+ L L N I S+E + F N +L++ ++
Sbjct: 596 NNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFN 645
Score = 127 (49.8 bits), Expect = 0.00025, P = 0.00025
Identities = 54/168 (32%), Positives = 77/168 (45%)
Query: 95 ERVSLLDCTLSNVTVLPGKF--LEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPN 152
+R+ L L NV P F L +T+ L +S+ + NI+D GL L+ L L +
Sbjct: 483 QRLMLRRVALKNVDSSPSPFQPLRNLTI--LDLSNNNIANINDDMLEGLEK-LEILDLQH 539
Query: 153 NLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSF--------KGLSSLNFLDLSYNKL 204
N L+ + A P P LSH + LE+ F K L L +DL N L
Sbjct: 540 NNLARLWKHA-NPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNL 598
Query: 205 MTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQG--LRSVTDLDLSHN 250
TL V+L+ L LQ N +T SV + G R++T+LD+ N
Sbjct: 599 NTLPASVFNNQVSLKSLNLQKNLIT-SVEKKVFGPAFRNLTELDMRFN 645
Score = 69 (29.3 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 14/45 (31%), Positives = 25/45 (55%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHS 688
L +L +L +++N +++ L GL+KL L HN + L H+
Sbjct: 505 LRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHA 549
Score = 52 (23.4 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 18/66 (27%), Positives = 31/66 (46%)
Query: 626 NRNNSDSRYVKLQATTIL---LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID 682
N + S+S+ TT L ++L +L +++N + V + A L +L +N I
Sbjct: 252 NLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQ 311
Query: 683 VLEDHS 688
L HS
Sbjct: 312 HLFSHS 317
Score = 43 (20.2 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 645 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
S L +L++ N+ S + A + L L L N+I
Sbjct: 407 SPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEI 443
Score = 42 (19.8 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 12/50 (24%), Positives = 22/50 (44%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNVI 693
LS L +L++ N F + L +L + N ++ L F+N +
Sbjct: 561 LSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQV 610
Score = 41 (19.5 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 15/51 (29%), Positives = 24/51 (47%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAG--LDKLTSLSCHHNQIDVLEDHSFSNV 692
L L++L + HN + + + A G + L LS H I LE + F +
Sbjct: 529 LEKLEILDLQHNNLARLWKHANPGGPIYFLKGLS--HLHILNLESNGFDEI 577
Score = 37 (18.1 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 11/46 (23%), Positives = 19/46 (41%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
L LK++ + N +++ L SL+ N I +E F
Sbjct: 585 LFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVF 630
>UNIPROTKB|E1BAW2 [details] [associations]
symbol:LRRC32 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050710 "negative regulation of cytokine secretion"
evidence=IEA] [GO:0046007 "negative regulation of activated T cell
proliferation" evidence=IEA] [GO:0010628 "positive regulation of
gene expression" evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
InterPro:IPR003591 SMART:SM00369 GO:GO:0010628 InterPro:IPR000372
SMART:SM00013 GO:GO:0046007 GO:GO:0050710
GeneTree:ENSGT00700000104185 CTD:2615 OMA:CCGNGWL EMBL:DAAA02041103
IPI:IPI00710724 RefSeq:NP_001180004.1 UniGene:Bt.88092
Ensembl:ENSBTAT00000001716 GeneID:615467 KEGG:bta:615467
NextBio:20899631 Uniprot:E1BAW2
Length = 662
Score = 193 (73.0 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 70/226 (30%), Positives = 98/226 (43%)
Query: 166 LAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQG 225
L+ +++ L+LS NQL + ++L LDLS N++ L L L L L
Sbjct: 48 LSRDIEVLNLSRNQLRSILALPLGFYTALRHLDLSANEISFLQPGVFQALPHLEHLNLAH 107
Query: 226 NRLTVSVVAALQGLRSV---TDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRR 282
N L V GL + T LDLS N L L + +L+ LS+A N + + R
Sbjct: 108 NHLAVGTALNTGGLGPLLHLTSLDLSGNSLYSGLVEQLLGEAPALRTLSLAENSLTRLGR 167
Query: 283 GALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTL 342
L L H N + +ED +F AL L HL+L+ N + +S SL L L
Sbjct: 168 RTFLSTPALERLDLHSNVLMDIEDGAFEALPRLVHLNLSRNSLTCISDFSL---QQLRVL 224
Query: 343 DLSHNFLRALTQDLITPLKSLQELRLDDN------DISMEPECIYV 382
DLS N + A L L L +N D+S P IY+
Sbjct: 225 DLSCNSIEAFQTAEPRAEYQLAWLDLRENKLLHFPDLSALPRLIYL 270
Score = 147 (56.8 bits), Expect = 9.8e-08, Sum P(2) = 9.8e-08
Identities = 84/270 (31%), Positives = 128/270 (47%)
Query: 136 GAFIGLSSPLQALG-LPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSL 194
G GL +P + LP L + ++ PL+ L+ LDLS+N++ + + L+SL
Sbjct: 286 GGAEGLHAPSEGWSSLP--LSNPSRNTSTQPLSQLLN-LDLSYNEIELVPEGFLEPLTSL 342
Query: 195 NFLDLSYNKLMTL-SQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLA 253
L+LS N L +Q P +TL L + N L + A + L S+ L L N L
Sbjct: 343 RSLNLSRNCLRAFEAQPGSLPCLTL--LDISHNALETLELGA-RALGSLRTLLLQDNALR 399
Query: 254 G-PLGPSTVPRLSSLKVLSIAHNQFSS----VRRG-----ALAGLDKLTSLSCHHNQIDV 303
PL T L+SL+ L++ N+ S G A +G+ L L+ N++++
Sbjct: 400 DLPL--YTFTSLASLQRLNLQGNRLSPCGGPAEPGPSGCVAFSGISSLRVLNLADNEMEI 457
Query: 304 LEDHSFRALST-LSHLDLAHNRIVAVSGASLAHLS-NLTTLDLSHNFLRALTQDLITPLK 361
L+ +F L T L+ LDL+ N + V+ +LA L +L L L N L L DL P
Sbjct: 458 LQAGAF--LHTPLAELDLSSNPGLDVAPGALAGLEGSLEVLALQGNGLAVLQVDL--PCF 513
Query: 362 S-LQELRLDDNDISMEPECIY-VGFNTMDL 389
S L+ L L +N +S P V +DL
Sbjct: 514 SCLKRLNLAENRLSRLPAWTQAVSLEVLDL 543
Score = 137 (53.3 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 82/284 (28%), Positives = 118/284 (41%)
Query: 100 LDCTLSNVTVL-PGKF-----LEGVTLHGLVISSGELKNISD-GAFIGLSSPLQALGLPN 152
LD + + ++ L PG F LE + L ++ G N G + L+S L G N
Sbjct: 79 LDLSANEISFLQPGVFQALPHLEHLNLAHNHLAVGTALNTGGLGPLLHLTS-LDLSG--N 135
Query: 153 NLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCL 212
+L S + L AP L L L+ N L +L +F +L LDL N LM +
Sbjct: 136 SLYSGLVEQLLGE-APALRTLSLAENSLTRLGRRTFLSTPALERLDLHSNVLMDIEDGAF 194
Query: 213 APLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLS-SLKVLS 271
L L L L N LT +LQ LR LDLS N + + PR L L
Sbjct: 195 EALPRLVHLNLSRNSLTCISDFSLQQLRV---LDLSCNSIEA--FQTAEPRAEYQLAWLD 249
Query: 272 IAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSG- 330
+ N+ + L+ L +L L+ +N I + + L H + +S
Sbjct: 250 LRENKL--LHFPDLSALPRLIYLNASNNLIRLPAEPPRGGAEGL-HAPSEGWSSLPLSNP 306
Query: 331 ---ASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
S LS L LDLS+N + + + + PL SL+ L L N
Sbjct: 307 SRNTSTQPLSQLLNLDLSYNEIELVPEGFLEPLTSLRSLNLSRN 350
Score = 123 (48.4 bits), Expect = 0.00045, P = 0.00045
Identities = 77/269 (28%), Positives = 121/269 (44%)
Query: 92 EPDERVSLLDCTLSNVTVLPGKFLEGVT-LHGLVISSGELKNISDGAFIGLSSPLQALGL 150
+P ++ LD + + + ++P FLE +T L L +S L+ A G L L +
Sbjct: 313 QPLSQLLNLDLSYNEIELVPEGFLEPLTSLRSLNLSRNCLRAFE--AQPGSLPCLTLLDI 370
Query: 151 PNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLS-- 208
+N L + A A L +L L L N L L +F L+SL L+L N+L
Sbjct: 371 SHNALETLELGARA-LG-SLRTLLLQDNALRDLPLYTFTSLASLQRLNLQGNRLSPCGGP 428
Query: 209 -----QDCLA--PLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAG-PLGPST 260
C+A + +LRVL L N + + A + +LDLS N G + P
Sbjct: 429 AEPGPSGCVAFSGISSLRVLNLADNEMEILQAGAFLHT-PLAELDLSSN--PGLDVAPGA 485
Query: 261 VPRLS-SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 319
+ L SL+VL++ N + V + L L L+ N++ L + +A+S L LD
Sbjct: 486 LAGLEGSLEVLALQGNGLA-VLQVDLPCFSCLKRLNLAENRLSRLPAWT-QAVS-LEVLD 542
Query: 320 LAHNRIVAVSGASLAHLSN-LTTLDLSHN 347
L +N + G+++ L N L L L N
Sbjct: 543 LRNNSFSLLPGSAMGGLENSLRRLYLQGN 571
Score = 63 (27.2 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 21/59 (35%), Positives = 30/59 (50%)
Query: 628 NNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLD-KLTSLSCHHNQIDVLE 685
N +D+ LQA L + L L ++ N V GALAGL+ L L+ N + VL+
Sbjct: 449 NLADNEMEILQAGAFLHTPLAELDLSSNPGLDVAPGALAGLEGSLEVLALQGNGLAVLQ 507
Score = 57 (25.1 bits), Expect = 9.6e-13, Sum P(2) = 9.6e-13
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 628 NNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLD 669
N +++R +L A T +S L+VL + +N FS + A+ GL+
Sbjct: 520 NLAENRLSRLPAWTQAVS-LEVLDLRNNSFSLLPGSAMGGLE 560
Score = 51 (23.0 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L +L I+HN ++ GA A L L +L N + L ++F+++
Sbjct: 362 LPCLTLLDISHNALETLELGARA-LGSLRTLLLQDNALRDLPLYTFTSL 409
Score = 47 (21.6 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 9/21 (42%), Positives = 16/21 (76%)
Query: 644 LSSLKVLSIAHNQFSSVRRGA 664
+SSL+VL++A N+ ++ GA
Sbjct: 442 ISSLRVLNLADNEMEILQAGA 462
>MGI|MGI:2136886 [details] [associations]
symbol:Rtn4r "reticulon 4 receptor" species:10090 "Mus
musculus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0007409 "axonogenesis"
evidence=IDA] [GO:0009986 "cell surface" evidence=ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0031225 "anchored to membrane"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2136886
GO:GO:0005783 GO:GO:0005886 GO:GO:0009986 GO:GO:0031225
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101803 HOGENOM:HOG000116109
HOVERGEN:HBG063707 CTD:65078 KO:K16659 EMBL:AF283462 EMBL:BC052317
EMBL:BC058381 IPI:IPI00121067 RefSeq:NP_075358.1 UniGene:Mm.40149
ProteinModelPortal:Q99PI8 SMR:Q99PI8 MINT:MINT-188355 STRING:Q99PI8
PRIDE:Q99PI8 Ensembl:ENSMUST00000059589 GeneID:65079 KEGG:mmu:65079
UCSC:uc007ymv.1 InParanoid:Q99PI8 OMA:PLWAWLQ OrthoDB:EOG4MGS7M
NextBio:320259 Bgee:Q99PI8 CleanEx:MM_RTN4R Genevestigator:Q99PI8
GermOnline:ENSMUSG00000043811 Uniprot:Q99PI8
Length = 473
Score = 212 (79.7 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 72/237 (30%), Positives = 102/237 (43%)
Query: 136 GAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLN 195
GA + + P P L VPT A + R+ L N++ + SF+ +L
Sbjct: 29 GACVCYNEPKVTTSCPQQGLQAVPTGIPA----SSQRIFLHGNRISHVPAASFQSCRNLT 84
Query: 196 FLDLSYNKLMTLSQDCLAPLVTLRVLRLQGN-RLTVSVVAALQGLRSVTDLDLSHNLLAG 254
L L N L + L L L L N +L V GL + L L L
Sbjct: 85 ILWLHSNALARIDAAAFTGLTLLEQLDLSDNAQLHVVDPTTFHGLGHLHTLHLDRCGLR- 143
Query: 255 PLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALST 314
LGP L++L+ L + N ++ L LT L H N+I + +H+FR L +
Sbjct: 144 ELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGLHS 203
Query: 315 LSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
L L L N + V + L L TL L N L L +++ PL+SLQ LRL+DN
Sbjct: 204 LDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNLSMLPAEVLMPLRSLQYLRLNDN 260
Score = 126 (49.4 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 52/162 (32%), Positives = 76/162 (46%)
Query: 90 GLEPDERVSLLDCTLSNVTVLPGKFLEGVT-LHGLVISSGELKNISDGAFIGLSSPLQAL 148
GL E++ L D +V V P F G+ LH L + L+ + G F GL++ LQ L
Sbjct: 103 GLTLLEQLDLSDNAQLHV-VDPTTF-HGLGHLHTLHLDRCGLRELGPGLFRGLAA-LQYL 159
Query: 149 GLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLS 208
L +N L +P + L NL L L N++ + +F+GL SL+ L L N + +
Sbjct: 160 YLQDNNLQALPDNTFRDLG-NLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVH 218
Query: 209 QDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHN 250
L L L L N L++ L LRS+ L L+ N
Sbjct: 219 PHAFRDLGRLMTLYLFANNLSMLPAEVLMPLRSLQYLRLNDN 260
Score = 115 (45.5 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 38/122 (31%), Positives = 58/122 (47%)
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 317
P+ +P SS ++ + N+ S V + LT L H N + ++ +F L+ L
Sbjct: 52 PTGIPA-SSQRIF-LHGNRISHVPAASFQSCRNLTILWLHSNALARIDAAAFTGLTLLEQ 109
Query: 318 LDLAHNRIVAVSGASLAH-LSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISME 376
LDL+ N + V + H L +L TL L LR L L L +LQ L L DN++
Sbjct: 110 LDLSDNAQLHVVDPTTFHGLGHLHTLHLDRCGLRELGPGLFRGLAALQYLYLQDNNLQAL 169
Query: 377 PE 378
P+
Sbjct: 170 PD 171
Score = 58 (25.5 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L +L L + N+ SV A GL L L H N + + H+F ++
Sbjct: 177 LGNLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDL 225
Score = 37 (18.1 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 6/21 (28%), Positives = 12/21 (57%)
Query: 359 PLKSLQELRLDDNDISMEPEC 379
P + +Q +L D ++ P+C
Sbjct: 315 PFRPIQTSQLTDEELLSLPKC 335
>WB|WBGene00001443 [details] [associations]
symbol:fli-1 species:6239 "Caenorhabditis elegans"
[GO:0003779 "actin binding" evidence=IEA] [GO:0008406 "gonad
development" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007122 PRINTS:PR00597
PROSITE:PS51450 SMART:SM00262 GO:GO:0005634 GO:GO:0008406
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 InterPro:IPR007123
PANTHER:PTHR11977 Pfam:PF00626 EMBL:U01183 EMBL:FO080165 PIR:A88536
PIR:S27783 RefSeq:NP_498913.2 UniGene:Cel.5659
ProteinModelPortal:P34268 SMR:P34268 STRING:P34268 PaxDb:P34268
EnsemblMetazoa:B0523.5 GeneID:176215 KEGG:cel:CELE_B0523.5
UCSC:B0523.5 CTD:176215 WormBase:B0523.5
GeneTree:ENSGT00660000095502 HOGENOM:HOG000016110 InParanoid:P34268
OMA:MEEWNED NextBio:891612 Uniprot:P34268
Length = 1257
Score = 212 (79.7 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 90/328 (27%), Positives = 156/328 (47%)
Query: 59 IKNDLCAC-DLPHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKF-LE 116
+ ++L C +L H L+ N+ L ++ L L V + D L + F ++
Sbjct: 47 VPDELSRCANLEH-LQMAHNQ--LISVHGELSDLPRLRSVIVRDNNLKTAGIPTDIFRMK 103
Query: 117 GVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLS 176
+T+ + +S +L+ + S + L L N + +P S A L +L LDLS
Sbjct: 104 DLTI--IDLSRNQLREVPTNLEYAKGSIV--LNLSYNNIETIPNSVCANLI-DLLFLDLS 158
Query: 177 HNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQG-NRLTVSVVAA 235
+N+L L + LS L L LS N L L + +L VL + NR ++
Sbjct: 159 NNKLDMLP-PQIRRLSMLQSLKLSNNPLNHFQLKQLPSMTSLSVLHMSNTNRTLDNIPPT 217
Query: 236 LQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLS 295
L + ++ D+D S N L P+ P + +L +L+ L+++ N+ + + L +L+
Sbjct: 218 LDDMHNLRDVDFSENNL--PIVPEALFKLRNLRKLNLSGNKIEKLNMTE-GEWENLETLN 274
Query: 296 CHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGAS-LAHLSNLTTLDLSHNFLRALTQ 354
HNQ+ VL D + L+ L+ L A+N++ S + L LT L LS+N L + +
Sbjct: 275 MSHNQLTVLPDCVVK-LTRLTKLYAANNQLTFEGIPSGIGKLIQLTVLHLSYNKLELVPE 333
Query: 355 DLITPLKSLQELRLDDNDISMEPECIYV 382
+ +K LQ+L+LD N + PE I++
Sbjct: 334 GISRCVK-LQKLKLDHNRLITLPEGIHL 360
Score = 151 (58.2 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 81/327 (24%), Positives = 135/327 (41%)
Query: 61 NDLCACDLPHTLRCTANKSDLYAISESLRGLEPDE-----RVSLLDCTLSNVTVLPGKFL 115
ND PH + + L +++S PDE + L + + + G+
Sbjct: 17 NDFSGDRFPHDVEQMTQMTWL-KLNDSKLEQVPDELSRCANLEHLQMAHNQLISVHGELS 75
Query: 116 EGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDL 175
+ L +++ LK I L + L N L VPT+ A L+L
Sbjct: 76 DLPRLRSVIVRDNNLKTAGIPTDIFRMKDLTIIDLSRNQLREVPTNL--EYAKGSIVLNL 133
Query: 176 SHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAA 235
S+N + + N+ L L FLDLS NKL L + L L+ L+L N L +
Sbjct: 134 SYNNIETIPNSVCANLIDLLFLDLSNNKLDMLPPQ-IRRLSMLQSLKLSNNPLNHFQLKQ 192
Query: 236 LQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLS 295
L + S++ L +S+ P T+ + +L+ + + N V AL L L L+
Sbjct: 193 LPSMTSLSVLHMSNTNRTLDNIPPTLDDMHNLRDVDFSENNLPIVPE-ALFKLRNLRKLN 251
Query: 296 CHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFL--RALT 353
N+I+ L + + L L+++HN++ + + L+ LT L ++N L +
Sbjct: 252 LSGNKIEKL-NMTEGEWENLETLNMSHNQLTVLPDC-VVKLTRLTKLYAANNQLTFEGIP 309
Query: 354 QDLITPLKSLQELRLDDNDISMEPECI 380
I L L L L N + + PE I
Sbjct: 310 SG-IGKLIQLTVLHLSYNKLELVPEGI 335
Score = 149 (57.5 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 54/224 (24%), Positives = 111/224 (49%)
Query: 173 LDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRL-TVS 231
L L+ ++L ++ + ++L L +++N+L+++ + L+ L LR + ++ N L T
Sbjct: 37 LKLNDSKLEQVPD-ELSRCANLEHLQMAHNQLISVHGE-LSDLPRLRSVIVRDNNLKTAG 94
Query: 232 VVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKL 291
+ + ++ +T +DLS N L P+ + VL++++N ++ A L L
Sbjct: 95 IPTDIFRMKDLTIIDLSRNQLREV--PTNLEYAKGSIVLNLSYNNIETIPNSVCANLIDL 152
Query: 292 TSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRA 351
L +N++D+L R LS L L L++N + + L L ++T+L + H
Sbjct: 153 LFLDLSNNKLDMLPPQ-IRRLSMLQSLKLSNNPL---NHFQLKQLPSMTSLSVLHMSNTN 208
Query: 352 LTQDLITP----LKSLQELRLDDNDISMEPECIYVGFNTMDLEL 391
T D I P + +L+++ +N++ + PE ++ N L L
Sbjct: 209 RTLDNIPPTLDDMHNLRDVDFSENNLPIVPEALFKLRNLRKLNL 252
Score = 59 (25.8 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 628 NNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
N S ++ KL T +L+ L+++HNQ + V + L +LT L +NQ+
Sbjct: 251 NLSGNKIEKLNMTEGEWENLETLNMSHNQLT-VLPDCVVKLTRLTKLYAANNQL 303
Score = 47 (21.6 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 12/43 (27%), Positives = 23/43 (53%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLED 686
L +L+ L+++ N+ + + L +L+ HNQ+ VL D
Sbjct: 244 LRNLRKLNLSGNKIEKLNMTE-GEWENLETLNMSHNQLTVLPD 285
>DICTYBASE|DDB_G0276371 [details] [associations]
symbol:gefL "Ras guanine nucleotide exchange factor"
species:44689 "Dictyostelium discoideum" [GO:0030587 "sorocarp
development" evidence=IMP] [GO:0046956 "positive phototaxis"
evidence=IMP] [GO:0043052 "thermotaxis" evidence=IMP] [GO:0051056
"regulation of small GTPase mediated signal transduction"
evidence=IEA] [GO:0030036 "actin cytoskeleton organization"
evidence=IEA] [GO:0017048 "Rho GTPase binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0003779 "actin binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000651 InterPro:IPR001895
InterPro:IPR010473 InterPro:IPR016024 Pfam:PF00617 Pfam:PF00618
Pfam:PF06371 PROSITE:PS00720 PROSITE:PS50009 PROSITE:PS50212
PROSITE:PS51450 SMART:SM00147 SMART:SM00229 dictyBase:DDB_G0276371
GO:GO:0007264 SUPFAM:SSF48371 GO:GO:0030036 InterPro:IPR003591
SMART:SM00369 GO:GO:0051056 EMBL:AAFI02000014
GenomeReviews:CM000151_GR GO:GO:0030587 GO:GO:0005622 GO:GO:0005085
GO:GO:0046956 Gene3D:1.10.840.10 InterPro:IPR023578 SUPFAM:SSF48366
InterPro:IPR014768 PROSITE:PS51232 eggNOG:KOG3417 GO:GO:0043052
EMBL:AY160101 RefSeq:XP_643190.2 ProteinModelPortal:B0M0P8
STRING:B0M0P8 EnsemblProtists:DDB0185197 GeneID:8620463
KEGG:ddi:DDB_G0276371 Uniprot:B0M0P8
Length = 2356
Score = 227 (85.0 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 82/271 (30%), Positives = 137/271 (50%)
Query: 123 LVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYK 182
++I S LK + G L L+ L + +N + +P L L L+ L L +N + K
Sbjct: 52 VIIKSCRLK-VLPGEISSLGGHLKKLHIEDNKIQEIPN--LEQLE-QLEELILPNNDIAK 107
Query: 183 LENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSV 242
+ S L++L LDLS N+L T+ L LV++R L L N+ + + + L L+ +
Sbjct: 108 FQ-VSISKLTTLRLLDLSGNQLGTIPVR-LFSLVSMRELYLDENQFS-NFPSHLCELQKL 164
Query: 243 TDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID 302
T L S+NLL P+ + ++ LK L ++ NQ S+ ++ L LT L C N +
Sbjct: 165 TTLGFSNNLLKSI--PTQIGQMIGLKKLILSGNQMESIPM-EISNLKSLTHLDCSSNILS 221
Query: 303 VLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKS 362
+ + LS LS L L HN++ ++ + +L +L L++N + L Q I L++
Sbjct: 222 SIPNELGNKLSQLSFLFLQHNKLRSIPD-EIGQCQSLVSLRLNNNSITLLPQS-IGELEN 279
Query: 363 LQELRLDDNDISMEPECIYVGFNTMDLELIY 393
LQEL L +N ++ P +G N L+ +Y
Sbjct: 280 LQELYLQENRLNTLPS--ELG-NCCSLKKLY 307
Score = 162 (62.1 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 71/267 (26%), Positives = 119/267 (44%)
Query: 99 LLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVV 158
LLD + + + +P + V++ L + + N + + L LG NNLL +
Sbjct: 120 LLDLSGNQLGTIPVRLFSLVSMRELYLDENQFSNFP--SHLCELQKLTTLGFSNNLLKSI 177
Query: 159 PTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTL 218
PT + + L +L LS NQ+ + L SL LD S N L ++ + L L
Sbjct: 178 PTQ-IGQMI-GLKKLILSGNQMESIP-MEISNLKSLTHLDCSSNILSSIPNELGNKLSQL 234
Query: 219 RVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFS 278
L LQ N+L S+ + +S+ L L++N + L P ++ L +L+ L + N+ +
Sbjct: 235 SFLFLQHNKLR-SIPDEIGQCQSLVSLRLNNNSIT--LLPQSIGELENLQELYLQENRLN 291
Query: 279 SVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSG-ASLAHLS 337
++ L L L N++ L D F+ L L+ L L N + + SL
Sbjct: 292 TLP-SELGNCCSLKKLYLEFNKLIALPDR-FKRLHCLNVLSLHDNLLDDLPNFLSLEFSQ 349
Query: 338 NLTTLDLSHN-FLRALTQDLITPLKSL 363
+L + +N FLR D+I L+ L
Sbjct: 350 HLIRFTIHNNPFLRENGIDVIDSLQFL 376
Score = 41 (19.5 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 620 QQEDDINRNNSDSRYVKLQATT 641
QQ D+ N NN+++ TT
Sbjct: 392 QQNDNSNNNNNNNNTTTTTTTT 413
>WB|WBGene00003915 [details] [associations]
symbol:pan-1 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0040007
GO:GO:0002119 GO:GO:0018996 InterPro:IPR003591 SMART:SM00369
GO:GO:0040011 InterPro:IPR025875 Pfam:PF12799 HSSP:P25147
EMBL:Z34802 GeneTree:ENSGT00700000104056 GeneID:175596
KEGG:cel:CELE_M88.6 UCSC:M88.6b CTD:175596 HOGENOM:HOG000021363
NextBio:888834 PIR:T23841 RefSeq:NP_497925.1
ProteinModelPortal:Q9U3A0 SMR:Q9U3A0 PRIDE:Q9U3A0
EnsemblMetazoa:M88.6b WormBase:M88.6b ArrayExpress:Q9U3A0
Uniprot:Q9U3A0
Length = 594
Score = 193 (73.0 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 76/308 (24%), Positives = 136/308 (44%)
Query: 71 TLRCTANKSDLYAISESLRGLEPDE--RVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSG 128
T+ C + + + ++SE+L L E R+++ D T V VLP E V + +
Sbjct: 58 TIECES--ASIASVSENLASLNGTELGRLTIRDST---VNVLPQDLFENVFAKQVKLERC 112
Query: 129 ELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSF 188
L + +F L + L L N + + L +L LDL+ N++ +++ +F
Sbjct: 113 GLSTLQPNSFQSLGGSAELLSLRENRIKKLEKGLFTGLK-SLKTLDLAMNKIQEIDVGAF 171
Query: 189 KGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLS 248
+ L + L L+ N + L + L+ L LQ L + A +GL S+ L LS
Sbjct: 172 EELKKVEELLLNENDIRVLKTGTFDGMKNLKKLTLQNCNLEIIQKGAFRGLNSLEQLILS 231
Query: 249 HNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHS 308
+N L + + L +L+VL + N+ S+V + L+KL ++N ID ++
Sbjct: 232 NNNLEN-IDWTIFSALKNLRVLDLGSNKISNVEMKSFPKLEKLV---LNNNTIDSMKSIK 287
Query: 309 FRALSTLSHLDLAHNRIVAVSGASLAHLSN---LTTLDLSHNFLRALTQDLITPLKSLQE 365
+ L +L N+I ++ + L+ + TL L+ N L ++ +L
Sbjct: 288 LKDLPSLVVALFDRNKIESIGDMDMFGLTRSDRIETLSLARNNLSQISPKAFQHTPNLIT 347
Query: 366 LRLDDNDI 373
L L N I
Sbjct: 348 LLLQYNQI 355
Score = 187 (70.9 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 81/353 (22%), Positives = 154/353 (43%)
Query: 59 IKNDLCACDL--PHTLRCTANKSDLYAISES-LRGLEPD-----ERVSLLDCTLSNVTVL 110
+K + C P++ + ++L ++ E+ ++ LE + + LD ++ + +
Sbjct: 107 VKLERCGLSTLQPNSFQSLGGSAELLSLRENRIKKLEKGLFTGLKSLKTLDLAMNKIQEI 166
Query: 111 P-GKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPN 169
G F E + L+++ +++ + G F G+ + L+ L L N L ++ A L +
Sbjct: 167 DVGAFEELKKVEELLLNENDIRVLKTGTFDGMKN-LKKLTLQNCNLEIIQKGAFRGLN-S 224
Query: 170 LDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLT 229
L++L LS+N L ++ T F L +L LDL NK+ + P L L L N +
Sbjct: 225 LEQLILSNNNLENIDWTIFSALKNLRVLDLGSNKISNVEMKSF-P--KLEKLVLNNNTID 281
Query: 230 VSVVAALQGLRSVTDLDLSHNLLA--GPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAG 287
L+ L S+ N + G + + R ++ LS+A N S + A
Sbjct: 282 SMKSIKLKDLPSLVVALFDRNKIESIGDMDMFGLTRSDRIETLSLARNNLSQISPKAFQH 341
Query: 288 LDKLTSLSCHHNQIDVLEDHS-------FRA-LSTLSHLDLAHNRIVAVSGASLAHLSNL 339
L +L +NQI+ L HS F A L L L L+ N + + L +L
Sbjct: 342 TPNLITLLLQYNQIEELSSHSPSQVRTPFLASLKKLVTLQLSSNNLSVIRSDELP--KSL 399
Query: 340 TTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELI 392
++L L HN + + + ++ ++ L L N ++ + + F+ +E +
Sbjct: 400 SSLALDHNVISKIEARALEGME-IKRLYLHSNKLNYLYQGTFDSFSPKSVEAV 451
Score = 154 (59.3 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 63/247 (25%), Positives = 108/247 (43%)
Query: 155 LSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAP 214
LS + ++ L + + L L N++ KLE F GL SL LDL+ NK+ +
Sbjct: 114 LSTLQPNSFQSLGGSAELLSLRENRIKKLEKGLFTGLKSLKTLDLAMNKIQEIDVGAFEE 173
Query: 215 LVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSH-NLLAGPLGPSTVPRLSSLKVLSIA 273
L + L L N + V G++++ L L + NL G L+SL+ L ++
Sbjct: 174 LKKVEELLLNENDIRVLKTGTFDGMKNLKKLTLQNCNLEIIQKG--AFRGLNSLEQLILS 231
Query: 274 HNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASL 333
+N ++ + L L L N+I +E SF L L L +N I ++ L
Sbjct: 232 NNNLENIDWTIFSALKNLRVLDLGSNKISNVEMKSFPKLEKLV---LNNNTIDSMKSIKL 288
Query: 334 AHLSNLTTLDLSHNFLRAL-TQDL--ITPLKSLQELRLDDNDIS-MEPECIYVGFNTMDL 389
L +L N + ++ D+ +T ++ L L N++S + P+ N + L
Sbjct: 289 KDLPSLVVALFDRNKIESIGDMDMFGLTRSDRIETLSLARNNLSQISPKAFQHTPNLITL 348
Query: 390 ELIYSGV 396
L Y+ +
Sbjct: 349 LLQYNQI 355
Score = 132 (51.5 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 52/192 (27%), Positives = 85/192 (44%)
Query: 184 ENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVT 243
EN + + L L + + + L QD L V + ++L+ L+ + Q L
Sbjct: 71 ENLASLNGTELGRLTIRDSTVNVLPQD-LFENVFAKQVKLERCGLSTLQPNSFQSLGGSA 129
Query: 244 DL-DLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID 302
+L L N + L L SLK L +A N+ + GA L K+ L + N I
Sbjct: 130 ELLSLRENRIK-KLEKGLFTGLKSLKTLDLAMNKIQEIDVGAFEELKKVEELLLNENDIR 188
Query: 303 VLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKS 362
VL+ +F + L L L + + + + L++L L LS+N L + + + LK+
Sbjct: 189 VLKTGTFDGMKNLKKLTLQNCNLEIIQKGAFRGLNSLEQLILSNNNLENIDWTIFSALKN 248
Query: 363 LQELRLDDNDIS 374
L+ L L N IS
Sbjct: 249 LRVLDLGSNKIS 260
Score = 116 (45.9 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 45/164 (27%), Positives = 81/164 (49%)
Query: 233 VAALQG--LRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDK 290
+A+L G L +T D + N+L L + + L+ ++ Q +S + +L G +
Sbjct: 73 LASLNGTELGRLTIRDSTVNVLPQDLFENVFAKQVKLERCGLSTLQPNSFQ--SLGGSAE 130
Query: 291 LTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLR 350
L SL N+I LE F L +L LDLA N+I + + L + L L+ N +R
Sbjct: 131 LLSL--RENRIKKLEKGLFTGLKSLKTLDLAMNKIQEIDVGAFEELKKVEELLLNENDIR 188
Query: 351 ALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELIYS 394
L +K+L++L L + ++ + + + G N+++ +LI S
Sbjct: 189 VLKTGTFDGMKNLKKLTLQNCNLEIIQKGAFRGLNSLE-QLILS 231
Score = 66 (28.3 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 647 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
++ LS+A N S + A L +L +NQI+ L HS S V
Sbjct: 321 IETLSLARNNLSQISPKAFQHTPNLITLLLQYNQIEELSSHSPSQV 366
Score = 61 (26.5 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 643 LLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSN 691
L SL L++ HN S + AL G++ + L H N+++ L +F +
Sbjct: 395 LPKSLSSLALDHNVISKIEARALEGME-IKRLYLHSNKLNYLYQGTFDS 442
Score = 54 (24.1 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 641 TILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL 684
T+LL ++ ++ + S VR LA L KL +L N + V+
Sbjct: 347 TLLLQYNQIEELSSHSPSQVRTPFLASLKKLVTLQLSSNNLSVI 390
Score = 50 (22.7 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLE 685
L +L+VL + N+ S+V + L+KL ++N ID ++
Sbjct: 246 LKNLRVLDLGSNKISNVEMKSFPKLEKLV---LNNNTIDSMK 284
>RGD|1308812 [details] [associations]
symbol:Mfhas1 "malignant fibrous histiocytoma amplified sequence
1" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 RGD:1308812
InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
EMBL:CH473970 InterPro:IPR020859 PROSITE:PS51424
GeneTree:ENSGT00690000102098 CTD:9258 OrthoDB:EOG4CVG64
IPI:IPI00212019 RefSeq:NP_001100786.1 UniGene:Rn.106316
Ensembl:ENSRNOT00000015203 GeneID:306508 KEGG:rno:306508
UCSC:RGD:1308812 NextBio:656142 Uniprot:D3ZJL1
Length = 1046
Score = 209 (78.6 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 83/255 (32%), Positives = 125/255 (49%)
Query: 141 LSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLS 200
L L L + +N L+++ ++ L L +L+LSHNQL L L+ L LD+S
Sbjct: 105 LGHHLTELDVSHNRLTILGAEVVSALR-ELRKLNLSHNQLPALP-AQLGALAHLEELDVS 162
Query: 201 YNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPST 260
+N+L L D + L LR L + N+LT LQ L ++ +LD+S N L G P
Sbjct: 163 FNRLAHLP-DSFSCLNHLRTLDVDHNQLTAFPQQLLQ-LAALEELDVSSNRLRGL--PED 218
Query: 261 VPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 320
+ L +LK+L ++ + ++ G L L SL +N + L D F L L L+L
Sbjct: 219 ISALRALKILWLSGAELGTLPSG-FCELASLESLMLDNNGLQALPDE-FSRLQRLKMLNL 276
Query: 321 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECI 380
+ N + A+L L+ L L LS N L ++ LI L L L LD+N I P+ I
Sbjct: 277 SSN-LFEEFPAALLPLAGLEELYLSRNQLTSVPS-LIAGLGRLLTLWLDNNRIRYLPDSI 334
Query: 381 YVGFNTMDLELIYSG 395
V ++ EL+ G
Sbjct: 335 -VELTGLE-ELVLQG 347
Score = 193 (73.0 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 64/189 (33%), Positives = 100/189 (52%)
Query: 191 LSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHN 250
+ + L+L N L + + + L +LRVL L+ NR A + +T+LD+SHN
Sbjct: 58 IGDIEVLNLGNNGLEDVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHN 117
Query: 251 LLAGPLGPSTVPRLSSLKVLSIAHNQFSSV--RRGALAGLDKLTSLSCHHNQIDVLEDHS 308
L LG V L L+ L+++HNQ ++ + GALA L++L N++ L D S
Sbjct: 118 RLT-ILGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEEL---DVSFNRLAHLPD-S 172
Query: 309 FRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRL 368
F L+ L LD+ HN++ A L L+ L LD+S N LR L +D I+ L++L+ L L
Sbjct: 173 FSCLNHLRTLDVDHNQLTAFP-QQLLQLAALEELDVSSNRLRGLPED-ISALRALKILWL 230
Query: 369 DDNDISMEP 377
++ P
Sbjct: 231 SGAELGTLP 239
Score = 189 (71.6 bits), Expect = 5.9e-11, P = 5.9e-11
Identities = 85/270 (31%), Positives = 127/270 (47%)
Query: 110 LPGKFLE-GVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAP 168
LP E G L L +S L I + L+ L L +N L +P L LA
Sbjct: 98 LPPAVAELGHHLTELDVSHNRL-TILGAEVVSALRELRKLNLSHNQLPALPAQ-LGALA- 154
Query: 169 NLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRL 228
+L+ LD+S N+L L + SF L+ L LD+ +N+L Q L L L L + NRL
Sbjct: 155 HLEELDVSFNRLAHLPD-SFSCLNHLRTLDVDHNQLTAFPQQLLQ-LAALEELDVSSNRL 212
Query: 229 TVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGL 288
+ + LR++ L LS L G L PS L+SL+ L + +N ++ + L
Sbjct: 213 R-GLPEDISALRALKILWLSGAEL-GTL-PSGFCELASLESLMLDNNGLQALP-DEFSRL 268
Query: 289 DKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNF 348
+L L+ N + + L+ L L L+ N++ +V +A L L TL L +N
Sbjct: 269 QRLKMLNLSSNLFEEFPA-ALLPLAGLEELYLSRNQLTSVPSL-IAGLGRLLTLWLDNNR 326
Query: 349 LRALTQDLITPLKSLQELRLDDNDISMEPE 378
+R L D I L L+EL L N I++ P+
Sbjct: 327 IRYLP-DSIVELTGLEELVLQGNQIAVLPD 355
Score = 185 (70.2 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 74/258 (28%), Positives = 119/258 (46%)
Query: 123 LVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYK 182
L + + L+++ +G L S L+ L L N + +P A+A L +L LD+SHN+L
Sbjct: 64 LNLGNNGLEDVPEGLGSALGS-LRVLVLRRNRFARLPP-AVAELGHHLTELDVSHNRLTI 121
Query: 183 LENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSV 242
L L L L+LS+N+L L L L L L + NRL + + L +
Sbjct: 122 LGAEVVSALRELRKLNLSHNQLPALPAQ-LGALAHLEELDVSFNRLA-HLPDSFSCLNHL 179
Query: 243 TDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID 302
LD+ HN L P + +L++L+ L ++ N+ + ++ L L L ++
Sbjct: 180 RTLDVDHNQLTA--FPQQLLQLAALEELDVSSNRLRGLPED-ISALRALKILWLSGAELG 236
Query: 303 VLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKS 362
L F L++L L L +N + A+ + L L L+LS N L+ PL
Sbjct: 237 TLPS-GFCELASLESLMLDNNGLQALPD-EFSRLQRLKMLNLSSNLFEEFPAALL-PLAG 293
Query: 363 LQELRLDDNDISMEPECI 380
L+EL L N ++ P I
Sbjct: 294 LEELYLSRNQLTSVPSLI 311
Score = 154 (59.3 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 60/211 (28%), Positives = 99/211 (46%)
Query: 169 NLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVT-LRVLRLQGNR 227
+++ L+L +N L + L SL L L N+ L +A L L L + NR
Sbjct: 60 DIEVLNLGNNGLEDVPEGLGSALGSLRVLVLRRNRFARLPP-AVAELGHHLTELDVSHNR 118
Query: 228 LTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAG 287
LT+ + LR + L+LSHN L P P+ + L+ L+ L ++ N+ + + + +
Sbjct: 119 LTILGAEVVSALRELRKLNLSHNQL--PALPAQLGALAHLEELDVSFNRLAHLP-DSFSC 175
Query: 288 LDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHN 347
L+ L +L HNQ+ + L+ L LD++ NR+ + ++ L L L LS
Sbjct: 176 LNHLRTLDVDHNQLTAFPQQLLQ-LAALEELDVSSNRLRGLP-EDISALRALKILWLSGA 233
Query: 348 FLRALTQDLITPLKSLQELRLDDNDISMEPE 378
L L L SL+ L LD+N + P+
Sbjct: 234 ELGTLPSGFCE-LASLESLMLDNNGLQALPD 263
Score = 129 (50.5 bits), Expect = 0.00018, P = 0.00018
Identities = 64/216 (29%), Positives = 94/216 (43%)
Query: 68 LPHTLRCTANKSDLYAISESLRGLEPDE-----RVSLLDCTLSNVTVLPGKFLEGVTLHG 122
LP L A+ +L L L PD + LD + +T P + L+ L
Sbjct: 146 LPAQLGALAHLEELDVSFNRLAHL-PDSFSCLNHLRTLDVDHNQLTAFPQQLLQLAALEE 204
Query: 123 LVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYK 182
L +SS L+ + + I L+ L L L +P S LA +L+ L L +N L
Sbjct: 205 LDVSSNRLRGLPED--ISALRALKILWLSGAELGTLP-SGFCELA-SLESLMLDNNGLQA 260
Query: 183 LENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSV 242
L + F L L L+LS N L L PL L L L N+LT SV + + GL +
Sbjct: 261 LPD-EFSRLQRLKMLNLSSN-LFEEFPAALLPLAGLEELYLSRNQLT-SVPSLIAGLGRL 317
Query: 243 TDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFS 278
L L +N + P ++ L+ L+ L + NQ +
Sbjct: 318 LTLWLDNNRIR--YLPDSIVELTGLEELVLQGNQIA 351
Score = 114 (45.2 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 41/144 (28%), Positives = 66/144 (45%)
Query: 252 LAGPLGPSTV-P-RLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 309
L P P V P + ++VL++ +N V G + L L L N+ L
Sbjct: 44 LESPDAPQLVLPANIGDIEVLNLGNNGLEDVPEGLGSALGSLRVLVLRRNRFARLPPAVA 103
Query: 310 RALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLD 369
L+ LD++HNR+ + ++ L L L+LSHN L AL L L L+EL +
Sbjct: 104 ELGHHLTELDVSHNRLTILGAEVVSALRELRKLNLSHNQLPALPAQL-GALAHLEELDVS 162
Query: 370 DNDISMEPE---CIYVGFNTMDLE 390
N ++ P+ C+ T+D++
Sbjct: 163 FNRLAHLPDSFSCLN-HLRTLDVD 185
Score = 68 (29.0 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 628 NNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLED 686
N S + + + A + L+ L+ L ++ NQ +SV +AGL +L +L +N+I L D
Sbjct: 275 NLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVP-SLIAGLGRLLTLWLDNNRIRYLPD 332
>TAIR|locus:2041150 [details] [associations]
symbol:BRL2 "BRI1-like 2" species:3702 "Arabidopsis
thaliana" [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA;ISS] [GO:0004713 "protein tyrosine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0006468 "protein
phosphorylation" evidence=IEA;ISS] [GO:0007169 "transmembrane
receptor protein tyrosine kinase signaling pathway" evidence=ISS]
[GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0004675
"transmembrane receptor protein serine/threonine kinase activity"
evidence=ISS] [GO:0010051 "xylem and phloem pattern formation"
evidence=IMP] [GO:0010233 "phloem transport" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009734 "auxin
mediated signaling pathway" evidence=RCA;IMP] [GO:0009742
"brassinosteroid mediated signaling pathway" evidence=IMP]
[GO:0010305 "leaf vascular tissue pattern formation" evidence=IMP]
[GO:0002237 "response to molecule of bacterial origin"
evidence=RCA] [GO:0007165 "signal transduction" evidence=RCA]
[GO:0010075 "regulation of meristem growth" evidence=RCA]
[GO:0010103 "stomatal complex morphogenesis" evidence=RCA]
[GO:0048443 "stamen development" evidence=RCA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000719 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 PROSITE:PS51450 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0009742 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009734 SUPFAM:SSF56112
eggNOG:COG4886 Gene3D:2.60.120.200 InterPro:IPR013320 GO:GO:0004675
GO:GO:0010305 HOGENOM:HOG000116551 InterPro:IPR013210 Pfam:PF08263
ProtClustDB:CLSN2682665 EMBL:AC006532 EMBL:AY074313 IPI:IPI00533250
PIR:B84431 RefSeq:NP_178304.1 UniGene:At.13922
ProteinModelPortal:Q9ZPS9 SMR:Q9ZPS9 IntAct:Q9ZPS9 STRING:Q9ZPS9
PRIDE:Q9ZPS9 EnsemblPlants:AT2G01950.1 GeneID:814726
KEGG:ath:AT2G01950 GeneFarm:616 TAIR:At2g01950 InParanoid:Q9ZPS9
OMA:ASWANSI Genevestigator:Q9ZPS9 GermOnline:AT2G01950
GO:GO:0010233 Uniprot:Q9ZPS9
Length = 1143
Score = 209 (78.6 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 91/317 (28%), Positives = 138/317 (43%)
Query: 86 ESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPL 145
+SL L+ E +L+ T ++ +LP +TL L +SS L F S L
Sbjct: 103 DSLSVLKLSENFFVLNST--SLLLLP------LTLTHLELSSSGLIGTLPENFFSKYSNL 154
Query: 146 QALGLP-NNLLSVVPTSALAPLAPNLDRLDLSHNQLY-KLENTSFKGLS--SLNFLDLSY 201
++ L NN +P + L LDLS+N + + + S S+ +LD S
Sbjct: 155 ISITLSYNNFTGKLPNDLFLS-SKKLQTLDLSYNNITGPISGLTIPLSSCVSMTYLDFSG 213
Query: 202 NKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTV 261
N + D L L+ L L N + + L+ + LDLSHN L G + P
Sbjct: 214 NSISGYISDSLINCTNLKSLNLSYNNFDGQIPKSFGELKLLQSLDLSHNRLTGWIPPEIG 273
Query: 262 PRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID-VLEDHSFRALSTLSHLDL 320
SL+ L +++N F+ V +L+ L SL +N I + R+ +L L L
Sbjct: 274 DTCRSLQNLRLSYNNFTGVIPESLSSCSWLQSLDLSNNNISGPFPNTILRSFGSLQILLL 333
Query: 321 AHNRIVAVSGASLAHLSNLTTLDLSHN-FLRALTQDLITPLKSLQELRLDDNDISME-PE 378
++N I S++ +L D S N F + DL SL+ELRL DN ++ E P
Sbjct: 334 SNNLISGDFPTSISACKSLRIADFSSNRFSGVIPPDLCPGAASLEELRLPDNLVTGEIPP 393
Query: 379 CIYV--GFNTMDLELIY 393
I T+DL L Y
Sbjct: 394 AISQCSELRTIDLSLNY 410
Score = 182 (69.1 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 83/292 (28%), Positives = 130/292 (44%)
Query: 98 SLLDCTLS--NVT-VLPGK-FLEGVTLHGLVISSGELKNISDGAFIGLSS--PLQALGLP 151
+L+ TLS N T LP FL L L +S + G I LSS + L
Sbjct: 153 NLISITLSYNNFTGKLPNDLFLSSKKLQTLDLSYNNITGPISGLTIPLSSCVSMTYLDFS 212
Query: 152 NNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMT-LSQD 210
N +S + +L NL L+LS+N SF L L LDLS+N+L + +
Sbjct: 213 GNSISGYISDSLINCT-NLKSLNLSYNNFDGQIPKSFGELKLLQSLDLSHNRLTGWIPPE 271
Query: 211 CLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPR-LSSLKV 269
+L+ LRL N T + +L + LDLS+N ++GP P+T+ R SL++
Sbjct: 272 IGDTCRSLQNLRLSYNNFTGVIPESLSSCSWLQSLDLSNNNISGPF-PNTILRSFGSLQI 330
Query: 270 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID-VLEDHSFRALSTLSHLDLAHNRIVAV 328
L +++N S +++ L N+ V+ ++L L L N +
Sbjct: 331 LLLSNNLISGDFPTSISACKSLRIADFSSNRFSGVIPPDLCPGAASLEELRLPDNLVTGE 390
Query: 329 SGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISME--PE 378
+++ S L T+DLS N+L I L+ L++ N+I+ E PE
Sbjct: 391 IPPAISQCSELRTIDLSLNYLNGTIPPEIGNLQKLEQFIAWYNNIAGEIPPE 442
Score = 142 (55.0 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 68/274 (24%), Positives = 107/274 (39%)
Query: 110 LPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLP-NNLLSVVPTSALAPLAP 168
+P F E L L +S L LQ L L NN V+P S +
Sbjct: 244 IPKSFGELKLLQSLDLSHNRLTGWIPPEIGDTCRSLQNLRLSYNNFTGVIPESLSS--CS 301
Query: 169 NLDRLDLSHNQLY-KLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNR 227
L LDLS+N + NT + SL L LS N + ++ +LR+ NR
Sbjct: 302 WLQSLDLSNNNISGPFPNTILRSFGSLQILLLSNNLISGDFPTSISACKSLRIADFSSNR 361
Query: 228 LTVSVVAAL-QGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALA 286
+ + L G S+ +L L NL+ G + P+ + + S L+ + ++ N + +
Sbjct: 362 FSGVIPPDLCPGAASLEELRLPDNLVTGEIPPA-ISQCSELRTIDLSLNYLNGTIPPEIG 420
Query: 287 GLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSH 346
L KL +N I L L L L +N++ + SN+ + +
Sbjct: 421 NLQKLEQFIAWYNNIAGEIPPEIGKLQNLKDLILNNNQLTGEIPPEFFNCSNIEWVSFTS 480
Query: 347 NFLRALTQDLITPLKSLQELRLDDNDISME--PE 378
N L L L L+L +N+ + E PE
Sbjct: 481 NRLTGEVPKDFGILSRLAVLQLGNNNFTGEIPPE 514
Score = 126 (49.4 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 56/212 (26%), Positives = 97/212 (45%)
Query: 207 LSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSS 266
+S + L +L VL+L N ++ + L ++T L+LS + L G L + + S+
Sbjct: 94 VSFNAFTSLDSLSVLKLSENFFVLNSTSLLLLPLTLTHLELSSSGLIGTLPENFFSKYSN 153
Query: 267 LKVLSIAHNQFSS-VRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALST---LSHLDLAH 322
L +++++N F+ + KL +L +N I LS+ +++LD +
Sbjct: 154 LISITLSYNNFTGKLPNDLFLSSKKLQTLDLSYNNITGPISGLTIPLSSCVSMTYLDFSG 213
Query: 323 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS--MEPECI 380
N I SL + +NL +L+LS+N LK LQ L L N ++ + PE
Sbjct: 214 NSISGYISDSLINCTNLKSLNLSYNNFDGQIPKSFGELKLLQSLDLSHNRLTGWIPPEIG 273
Query: 381 YVGFNTMDLELIYSGVWRHSTLLIPVMLSLCT 412
+ +L L Y+ T +IP LS C+
Sbjct: 274 DTCRSLQNLRLSYNNF----TGVIPESLSSCS 301
Score = 52 (23.4 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 14/47 (29%), Positives = 22/47 (46%)
Query: 646 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
+L+VL ++HNQ S + L L N++ SFSN+
Sbjct: 636 ALQVLELSHNQLSGEIPFTIGQLKNLGVFDASDNRLQGQIPESFSNL 682
>TAIR|locus:2074728 [details] [associations]
symbol:PIRL9 "plant intracellular ras group-related LRR
9" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0009555 "pollen development" evidence=IGI]
[GO:0055046 "microgametogenesis" evidence=IGI] [GO:0016132
"brassinosteroid biosynthetic process" evidence=RCA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 EMBL:CP002686
GenomeReviews:BA000014_GR eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 GO:GO:0055046 InterPro:IPR025875 Pfam:PF12799
EMBL:AY072078 EMBL:AY122958 EMBL:AY849579 IPI:IPI00535260
RefSeq:NP_187741.2 UniGene:At.39776 ProteinModelPortal:Q8VYG9
SMR:Q8VYG9 PaxDb:Q8VYG9 PRIDE:Q8VYG9 EnsemblPlants:AT3G11330.1
GeneID:820306 KEGG:ath:AT3G11330 TAIR:At3g11330
HOGENOM:HOG000239210 InParanoid:Q8VYG9 OMA:HASANPV PhylomeDB:Q8VYG9
ProtClustDB:CLSN2686671 ArrayExpress:Q8VYG9 Genevestigator:Q8VYG9
Uniprot:Q8VYG9
Length = 499
Score = 205 (77.2 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 76/238 (31%), Positives = 123/238 (51%)
Query: 142 SSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSY 201
++P+ + L L ++P A + L L+LS+N+L + + S GL SL LD+S
Sbjct: 197 ANPVDRVDLSGRKLRLLP-EAFGRIQ-GLLVLNLSNNKLESIPD-SIAGLHSLVELDVST 253
Query: 202 NKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTV 261
N L TL D + L L++L + N+LT S+ ++ S+ LD+S N L L +
Sbjct: 254 NSLETLP-DSIGLLSKLKILNVSTNKLT-SLPDSICRCGSLVILDVSFNRLTY-LPTNIG 310
Query: 262 PRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 321
P L +L+ L + +N+ S ++ + L L H N+++ L D SF L+ L +L+L+
Sbjct: 311 PELVNLEKLLVQYNKIRSFPT-SIGEMRSLKHLDAHFNELNGLPD-SFVLLTNLEYLNLS 368
Query: 322 HN-RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPE 378
N + S L +L LDLS+N + AL D L SL +L +D N + + PE
Sbjct: 369 SNFSDLKDLPFSFGELISLQELDLSNNQIHALP-DTFGTLDSLTKLNVDQNPLVVPPE 425
Score = 167 (63.8 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 70/234 (29%), Positives = 120/234 (51%)
Query: 97 VSLLDCTLSNVTVLPGKF--LEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNL 154
V +D + + +LP F ++G+ + L +S+ +L++I D + GL S L L + N
Sbjct: 200 VDRVDLSGRKLRLLPEAFGRIQGLLV--LNLSNNKLESIPD-SIAGLHS-LVELDVSTNS 255
Query: 155 LSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAP 214
L +P S L L L++S N+L L ++ + SL LD+S+N+L L +
Sbjct: 256 LETLPDSI--GLLSKLKILNVSTNKLTSLPDSICR-CGSLVILDVSFNRLTYLPTNIGPE 312
Query: 215 LVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAH 274
LV L L +Q N++ S ++ +RS+ LD N L G P + L++L+ L+++
Sbjct: 313 LVNLEKLLVQYNKIR-SFPTSIGEMRSLKHLDAHFNELNGL--PDSFVLLTNLEYLNLSS 369
Query: 275 NQFSSVRR--GALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 326
N FS ++ + L L L +NQI L D +F L +L+ L++ N +V
Sbjct: 370 N-FSDLKDLPFSFGELISLQELDLSNNQIHALPD-TFGTLDSLTKLNVDQNPLV 421
Score = 131 (51.2 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 58/216 (26%), Positives = 96/216 (44%)
Query: 174 DLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPL---VTLRVLRLQGNRLTV 230
D Q E T + + L+ + SY KL+ +++ L + + N V
Sbjct: 123 DEKRRQEMDQEKTWCESILKLDEVHASYEKLLKEAEERLVRIYESAEKNAAEDEENVAAV 182
Query: 231 SV----VAALQ--GLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGA 284
V V LQ V +DLS L L P R+ L VL++++N+ S+ +
Sbjct: 183 EVNEEVVGILQHASANPVDRVDLSGRKLR--LLPEAFGRIQGLLVLNLSNNKLESIP-DS 239
Query: 285 LAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDL 344
+AGL L L N ++ L D S LS L L+++ N++ ++ S+ +L LD+
Sbjct: 240 IAGLHSLVELDVSTNSLETLPD-SIGLLSKLKILNVSTNKLTSLPD-SICRCGSLVILDV 297
Query: 345 SHNFLRALTQDLITPLKSLQELRLDDNDISMEPECI 380
S N L L ++ L +L++L + N I P I
Sbjct: 298 SFNRLTYLPTNIGPELVNLEKLLVQYNKIRSFPTSI 333
>ZFIN|ZDB-GENE-040219-7 [details] [associations]
symbol:tlr3 "toll-like receptor 3" species:7955
"Danio rerio" [GO:0032722 "positive regulation of chemokine
production" evidence=IEA] [GO:0043330 "response to exogenous dsRNA"
evidence=IEA] [GO:0050729 "positive regulation of inflammatory
response" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0034138 "toll-like receptor 3 signaling pathway"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0001819 "positive
regulation of cytokine production" evidence=IEA] [GO:0002756
"MyD88-independent toll-like receptor signaling pathway"
evidence=IEA] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0004888 "transmembrane signaling receptor
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009615 "response to virus" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0009617 "response to bacterium"
evidence=IDA] InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
ZFIN:ZDB-GENE-040219-7 GO:GO:0016021 GO:GO:0007165 GO:GO:0009617
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005622 GO:GO:0009615 InterPro:IPR000372 SMART:SM00013
InterPro:IPR026906 Pfam:PF13306 SUPFAM:SSF52200 HOVERGEN:HBG023181
PANTHER:PTHR24365:SF5 EMBL:AY616582 IPI:IPI00510961
UniGene:Dr.82491 ProteinModelPortal:Q6IWL5 STRING:Q6IWL5
InParanoid:Q6IWL5 Uniprot:Q6IWL5
Length = 903
Score = 209 (78.6 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 79/267 (29%), Positives = 133/267 (49%)
Query: 130 LKNISDGAFIGLS-SPL-QALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQL-YKLENT 186
+K +++ F GL SPL Q L L ++ + A + NL L +S N + +L+
Sbjct: 391 IKTVTNKTFAGLKESPLLQTLNLTGMGINKLEPGAFSSFG-NLSNLLMSRNFINQQLQGN 449
Query: 187 SFKGLSSLNFLDLSYNKL-MTLSQDCLAPLVTLRVLRLQGNRL--TVSVVAA-LQGLRSV 242
FKGLS++ +D+S N+ ++L+ + TLR+L+L G L T+ + + + L ++
Sbjct: 450 EFKGLSNIKEIDMSINQQSISLTNASFVHVSTLRILKL-GRALKGTLDMEPSPFRPLVNL 508
Query: 243 TDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAG-----LDKLTSLS-- 295
T LDLS+N +A G + L +LKV+ + HN + + + A G L T+LS
Sbjct: 509 TILDLSNNNIANING-DLLEGLYNLKVVKMQHNNLARLWKMANPGGPVLFLKDATNLSYL 567
Query: 296 -CHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQ 354
+N ID + ++FR S L L L N + + + L++L L L N + ++ +
Sbjct: 568 NLDYNGIDEIPPNAFRGFSELHELSLRGNLLDQLHASVFDDLNSLKYLHLQKNLITSVQR 627
Query: 355 DLI-TPLKSLQELRLDDNDISMEPECI 380
PL L+EL +D N E I
Sbjct: 628 ATFGVPLSKLKELYMDHNPFDCTCESI 654
Score = 187 (70.9 bits), Expect = 6.7e-12, Sum P(2) = 6.7e-12
Identities = 96/339 (28%), Positives = 150/339 (44%)
Query: 59 IKNDLCACDLPHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGK-FLEG 117
I+ DLC LPH A + +Y ISE + L+ ++ LD + N L G+ F
Sbjct: 91 IEKDLCL-SLPHLQFLNAQHNQVYLISE--KDLKNCFHLTQLDLS-DNKLKLQGEPFSLL 146
Query: 118 VTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLD-R-LDL 175
L L +S +L + G L + L L L N ++++ + + L+ + R L L
Sbjct: 147 KNLTWLDVSRNKLTSAKLGTEPQLPN-LVTLVLSGNNINILQKNDFSFLSNSSSFRVLIL 205
Query: 176 SHNQLYKLENTSFKGLSSLNFLDLSYNKLMT-LSQDCLAPLV--TLRVLRLQGNRLTVSV 232
S L K+EN FK + +L L L +KL + + L LR L L+
Sbjct: 206 SSLILKKVENGCFKAIDTLYDLVLDSSKLTSQFTTSLFEELADTALRNLSLKSTEQVTLS 265
Query: 233 VAALQGLRS--VTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDK 290
QGL +T LDLS N ++ + L L+ LS+ HN + + +GL
Sbjct: 266 NTTFQGLEKTKITVLDLSENRIS-KIVDGAFQWLPQLEFLSLEHNTIRHLTNDSFSGLGN 324
Query: 291 LTSLSCH------HNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDL 344
L L+ H + V++D SF+ L L +L +A+ ++ + L NL TLDL
Sbjct: 325 LRQLNLRKALIKSHASLPVIDDFSFQHLVQLEYLCMANTAFRELTEQIFSGLRNLKTLDL 384
Query: 345 SHNF--LRALTQDLITPLKS---LQELRLDDNDIS-MEP 377
S + ++ +T LK LQ L L I+ +EP
Sbjct: 385 SWSITGIKTVTNKTFAGLKESPLLQTLNLTGMGINKLEP 423
Score = 173 (66.0 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 85/331 (25%), Positives = 153/331 (46%)
Query: 87 SLRGLEPDERVSLLDCTLSNVT-VLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPL 145
+ +GLE ++++LD + + ++ ++ G F L L + ++++++ +F GL + L
Sbjct: 268 TFQGLEKT-KITVLDLSENRISKIVDGAFQWLPQLEFLSLEHNTIRHLTNDSFSGLGN-L 325
Query: 146 QALGLPNNL------LSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDL 199
+ L L L L V+ + L L+ L +++ +L F GL +L LDL
Sbjct: 326 RQLNLRKALIKSHASLPVIDDFSFQHLV-QLEYLCMANTAFRELTEQIFSGLRNLKTLDL 384
Query: 200 SYN--KLMTLSQDCLAPLVT---LRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAG 254
S++ + T++ A L L+ L L G + A ++++L +S N +
Sbjct: 385 SWSITGIKTVTNKTFAGLKESPLLQTLNLTGMGINKLEPGAFSSFGNLSNLLMSRNFINQ 444
Query: 255 PLGPSTVPRLSSLKVLSIAHNQFS-SVRRGALAGLDKLTSLSCHH---NQIDVLEDHSFR 310
L + LS++K + ++ NQ S S+ + + L L +D +E FR
Sbjct: 445 QLQGNEFKGLSNIKEIDMSINQQSISLTNASFVHVSTLRILKLGRALKGTLD-MEPSPFR 503
Query: 311 ALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITP------LK--- 361
L L+ LDL++N I ++G L L NL + + HN L L + + P LK
Sbjct: 504 PLVNLTILDLSNNNIANINGDLLEGLYNLKVVKMQHNNLARLWK-MANPGGPVLFLKDAT 562
Query: 362 SLQELRLDDNDISMEPECIYVGFNTM-DLEL 391
+L L LD N I P + GF+ + +L L
Sbjct: 563 NLSYLNLDYNGIDEIPPNAFRGFSELHELSL 593
Score = 158 (60.7 bits), Expect = 9.1e-09, Sum P(2) = 9.1e-09
Identities = 81/315 (25%), Positives = 132/315 (41%)
Query: 101 DCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPT 160
DC+ N+ +P +T L +S LK +S + + + L + N L+ +
Sbjct: 39 DCSHMNLDAIPTDLPTNITT--LDVSHNRLKTLSS---LHMYTNLVNIDASYNSLAGIEK 93
Query: 161 SALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRV 220
L P+L L+ HNQ+Y + K L LDLS NKL L + + L L
Sbjct: 94 DLCLSL-PHLQFLNAQHNQVYLISEKDLKNCFHLTQLDLSDNKLK-LQGEPFSLLKNLTW 151
Query: 221 LRLQGNRLTVSVVAALQGLRSVTDLDLS-HNL-LAGPLGPSTVPRLSSLKVLSIAHNQFS 278
L + N+LT + + L ++ L LS +N+ + S + SS +VL ++
Sbjct: 152 LDVSRNKLTSAKLGTEPQLPNLVTLVLSGNNINILQKNDFSFLSNSSSFRVLILSSLILK 211
Query: 279 SVRRGALAGLDKLTSLSCHHNQIDVLEDHS-FRALS--TLSHLDLAHNRIVAVSGASLAH 335
V G +D L L +++ S F L+ L +L L V +S +
Sbjct: 212 KVENGCFKAIDTLYDLVLDSSKLTSQFTTSLFEELADTALRNLSLKSTEQVTLSNTTFQG 271
Query: 336 L--SNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGF-NTMDLELI 392
L + +T LDLS N + + L L+ L L+ N I + G N L L
Sbjct: 272 LEKTKITVLDLSENRISKIVDGAFQWLPQLEFLSLEHNTIRHLTNDSFSGLGNLRQLNLR 331
Query: 393 YSGVWRHSTLLIPVM 407
+ + H++L PV+
Sbjct: 332 KALIKSHASL--PVI 344
Score = 138 (53.6 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 72/278 (25%), Positives = 127/278 (45%)
Query: 119 TLHGLVISSGELKN-ISDGAFIGLS-SPLQALGLPNNLLSVVPTSALAPLAPN-LDRLDL 175
TL+ LV+ S +L + + F L+ + L+ L L + + + L + LDL
Sbjct: 223 TLYDLVLDSSKLTSQFTTSLFEELADTALRNLSLKSTEQVTLSNTTFQGLEKTKITVLDL 282
Query: 176 SHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQG----NRLTVS 231
S N++ K+ + +F+ L L FL L +N + L+ D + L LR L L+ + ++
Sbjct: 283 SENRISKIVDGAFQWLPQLEFLSLEHNTIRHLTNDSFSGLGNLRQLNLRKALIKSHASLP 342
Query: 232 VVA--ALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHN--QFSSVRRGALAG 287
V+ + Q L + L ++ N L L +LK L ++ + +V AG
Sbjct: 343 VIDDFSFQHLVQLEYLCMA-NTAFRELTEQIFSGLRNLKTLDLSWSITGIKTVTNKTFAG 401
Query: 288 LDK---LTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI-VAVSGASLAHLSNLTTLD 343
L + L +L+ I+ LE +F + LS+L ++ N I + G LSN+ +D
Sbjct: 402 LKESPLLQTLNLTGMGINKLEPGAFSSFGNLSNLLMSRNFINQQLQGNEFKGLSNIKEID 461
Query: 344 LSHNFLR-ALTQDLITPLKSLQELRLD---DNDISMEP 377
+S N +LT + +L+ L+L + MEP
Sbjct: 462 MSINQQSISLTNASFVHVSTLRILKLGRALKGTLDMEP 499
Score = 59 (25.8 bits), Expect = 6.7e-12, Sum P(2) = 6.7e-12
Identities = 16/40 (40%), Positives = 20/40 (50%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALA-GLDKLTSLSCHHNQID 682
L+SLK L + N +SV+R L KL L HN D
Sbjct: 609 LNSLKYLHLQKNLITSVQRATFGVPLSKLKELYMDHNPFD 648
Score = 51 (23.0 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 10/38 (26%), Positives = 20/38 (52%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
L +L +L +++N +++ L GL L + HN +
Sbjct: 505 LVNLTILDLSNNNIANINGDLLEGLYNLKVVKMQHNNL 542
Score = 39 (18.8 bits), Expect = 7.9e-10, Sum P(2) = 7.9e-10
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAG-----LDKLTSLS---CHHNQIDVLEDHSF 689
L +LKV+ + HN + + + A G L T+LS +N ID + ++F
Sbjct: 529 LYNLKVVKMQHNNLARLWKMANPGGPVLFLKDATNLSYLNLDYNGIDEIPPNAF 582
>MGI|MGI:2156367 [details] [associations]
symbol:Tlr3 "toll-like receptor 3" species:10090 "Mus
musculus" [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISO] [GO:0002224 "toll-like receptor
signaling pathway" evidence=ISO] [GO:0002282 "microglial cell
activation involved in immune response" evidence=ISO] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=ISO] [GO:0004872 "receptor activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005768 "endosome" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0006952 "defense
response" evidence=IMP] [GO:0006954 "inflammatory response"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007252 "I-kappaB phosphorylation" evidence=ISO] [GO:0009615
"response to virus" evidence=IMP] [GO:0009986 "cell surface"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0032481 "positive
regulation of type I interferon production" evidence=IDA]
[GO:0032722 "positive regulation of chemokine production"
evidence=ISO] [GO:0032728 "positive regulation of interferon-beta
production" evidence=IDA] [GO:0032735 "positive regulation of
interleukin-12 production" evidence=IDA] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=ISO;IMP;IDA]
[GO:0032757 "positive regulation of interleukin-8 production"
evidence=ISO] [GO:0032760 "positive regulation of tumor necrosis
factor production" evidence=IDA;IMP] [GO:0034123 "positive
regulation of toll-like receptor signaling pathway" evidence=ISO]
[GO:0034346 "positive regulation of type III interferon production"
evidence=IDA] [GO:0042346 "positive regulation of NF-kappaB import
into nucleus" evidence=ISO] [GO:0043123 "positive regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IGI;IDA;IMP]
[GO:0043330 "response to exogenous dsRNA" evidence=IMP] [GO:0043331
"response to dsRNA" evidence=ISO] [GO:0045078 "positive regulation
of interferon-gamma biosynthetic process" evidence=ISO] [GO:0045080
"positive regulation of chemokine biosynthetic process"
evidence=IMP] [GO:0045087 "innate immune response" evidence=TAS]
[GO:0045356 "positive regulation of interferon-alpha biosynthetic
process" evidence=ISO] [GO:0045359 "positive regulation of
interferon-beta biosynthetic process" evidence=ISO;ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;IDA] [GO:0046330 "positive regulation of JNK
cascade" evidence=IDA] [GO:0051092 "positive regulation of
NF-kappaB transcription factor activity" evidence=IMP] [GO:0051607
"defense response to virus" evidence=IGI;TAS] [GO:0052033
"pathogen-associated molecular pattern dependent induction by
symbiont of host innate immune response" evidence=ISO] [GO:0071360
"cellular response to exogenous dsRNA" evidence=ISO] Pfam:PF00560
InterPro:IPR000157 InterPro:IPR001611 InterPro:IPR027173
Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
MGI:MGI:2156367 GO:GO:0016021 GO:GO:0009986 GO:GO:0005789
GO:GO:0043123 GO:GO:0006954 GO:GO:0046330 GO:GO:0045944
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0045087 GO:GO:0032722 GO:GO:0032755 GO:GO:0004872
GO:GO:0051607 GO:GO:0010008 GO:GO:0008584 GO:GO:0043065
GO:GO:0035690 GO:GO:0003725 GO:GO:0051092 GO:GO:0032757
GO:GO:0071260 GO:GO:0001934 GO:GO:0071346 GO:GO:0035458
InterPro:IPR000372 SMART:SM00013 GO:GO:0032760 GO:GO:0002224
GO:GO:0052033 GO:GO:0043330 GO:GO:0032735 GO:GO:0042346
GO:GO:0045078 GO:GO:0002282 GO:GO:0032728 GO:GO:0007252
GO:GO:0045080 SUPFAM:SSF52200 GO:GO:0071360 GO:GO:0045359
GeneTree:ENSGT00680000099674 GO:GO:0034123 CTD:7098
HOVERGEN:HBG023181 KO:K05401 OrthoDB:EOG4N30N8
PANTHER:PTHR24365:SF5 HOGENOM:HOG000251618 OMA:IANINDD
GO:GO:0045356 GO:GO:0034346 EMBL:AF420279 EMBL:AF355152
EMBL:AK083977 IPI:IPI00320618 RefSeq:NP_569054.2 UniGene:Mm.33874
PDB:3CIG PDB:3CIY PDBsum:3CIG PDBsum:3CIY ProteinModelPortal:Q99MB1
SMR:Q99MB1 STRING:Q99MB1 PhosphoSite:Q99MB1 PaxDb:Q99MB1
PRIDE:Q99MB1 Ensembl:ENSMUST00000034056 Ensembl:ENSMUST00000167106
GeneID:142980 KEGG:mmu:142980 UCSC:uc009loy.1 eggNOG:NOG265249
InParanoid:Q99MB1 EvolutionaryTrace:Q99MB1 NextBio:370067
Bgee:Q99MB1 CleanEx:MM_TLR3 Genevestigator:Q99MB1
GermOnline:ENSMUSG00000031639 Uniprot:Q99MB1
Length = 905
Score = 197 (74.4 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 71/239 (29%), Positives = 108/239 (45%)
Query: 166 LAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQG 225
L N+ L+L+HNQL +L T+F S L LD +N + L + L L+VL LQ
Sbjct: 50 LPSNITVLNLTHNQLRRLPPTNFTRYSQLAILDAGFNSISKLEPELCQILPLLKVLNLQH 109
Query: 226 NRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGAL 285
N L+ ++T+LDL N + + + +L L ++HN SS + G
Sbjct: 110 NELSQISDQTFVFCTNLTELDLMSNSIH-KIKSNPFKNQKNLIKLDLSHNGLSSTKLGTG 168
Query: 286 AGLDKLTSLSCHHNQIDVL--EDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLD 343
L+ L L N+I L E+ F S+L LDL+ N + S + L L
Sbjct: 169 VQLENLQELLLAKNKILALRSEELEFLGNSSLRKLDLSSNPLKEFSPGCFQTIGKLFALL 228
Query: 344 LSHNFLRA-LTQDLITPLK--SLQELRLDDNDISMEPECIYVGF---NTMDLELIYSGV 396
L++ L LT+ L L S+Q L L +N + E + G N L+L Y+ +
Sbjct: 229 LNNAQLNPHLTEKLCWELSNTSIQNLSLANNQLLATSESTFSGLKWTNLTQLDLSYNNL 287
Score = 189 (71.6 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 76/294 (25%), Positives = 140/294 (47%)
Query: 96 RVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLL 155
R ++ DC+ +T +P +T+ L ++ +L+ + F S L L N +
Sbjct: 32 RYNVADCSHLKLTHIPDDLPSNITV--LNLTHNQLRRLPPTNFTRYSQ-LAILDAGFNSI 88
Query: 156 SVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPL 215
S + L + P L L+L HN+L ++ + +F ++L LDL N + + +
Sbjct: 89 SKLEPE-LCQILPLLKVLNLQHNELSQISDQTFVFCTNLTELDLMSNSIHKIKSNPFKNQ 147
Query: 216 VTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRL--SSLKVLSIA 273
L L L N L+ + + L ++ +L L+ N + L + L SSL+ L ++
Sbjct: 148 KNLIKLDLSHNGLSSTKLGTGVQLENLQELLLAKNKILA-LRSEELEFLGNSSLRKLDLS 206
Query: 274 HNQFSSVRRGALAGLDKLTSLSCHHNQID--VLEDHSFRALST-LSHLDLAHNRIVAVSG 330
N G + KL +L ++ Q++ + E + +T + +L LA+N+++A S
Sbjct: 207 SNPLKEFSPGCFQTIGKLFALLLNNAQLNPHLTEKLCWELSNTSIQNLSLANNQLLATSE 266
Query: 331 ASLAHL--SNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS-MEPECIY 381
++ + L +NLT LDLS+N L + + L SL+ L L+ N+I + P Y
Sbjct: 267 STFSGLKWTNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEYNNIQRLSPRSFY 320
Score = 187 (70.9 bits), Expect = 4.2e-12, Sum P(2) = 4.2e-12
Identities = 82/276 (29%), Positives = 128/276 (46%)
Query: 111 PGKFLEGVTLHGLVISSGELK-NISDGAFIGLSSP-LQALGLPNNLLSVVPTSALAPLA- 167
PG F L L++++ +L ++++ LS+ +Q L L NN L S + L
Sbjct: 215 PGCFQTIGKLFALLLNNAQLNPHLTEKLCWELSNTSIQNLSLANNQLLATSESTFSGLKW 274
Query: 168 PNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQG-- 225
NL +LDLS+N L+ + N SF L SL +L L YN + LS L LR L L+
Sbjct: 275 TNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEYNNIQRLSPRSFYGLSNLRYLSLKRAF 334
Query: 226 NRLTVSVVA-------ALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFS 278
+ +VS+ + + Q L+ + L++ N + +T L SLK LS++ F+
Sbjct: 335 TKQSVSLASHPNIDDFSFQWLKYLEYLNMDDNNIPSTKS-NTFTGLVSLKYLSLSKT-FT 392
Query: 279 SVR---RGALAGL--DKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVA-VSGAS 332
S++ L L +L+ N I + + +F L L LDL N I +SG
Sbjct: 393 SLQTLTNETFVSLAHSPLLTLNLTKNHISKIANGTFSWLGQLRILDLGLNEIEQKLSGQE 452
Query: 333 LAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRL 368
L N+ + LS+N L+ + SLQ L L
Sbjct: 453 WRGLRNIFEIYLSYNKYLQLSTSSFALVPSLQRLML 488
Score = 166 (63.5 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 87/346 (25%), Positives = 147/346 (42%)
Query: 76 ANKSDLYAISES-LRGLEPDERVSLLDCTLSNV-TVLPGKFLEGVTLHGLVISSGELKNI 133
AN + L A SES GL+ ++ LD + +N+ V G F +L L + ++ +
Sbjct: 257 AN-NQLLATSESTFSGLKWTN-LTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEYNNIQRL 314
Query: 134 SDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPN--------LDRLDLSHNQLYKLEN 185
S +F GLS+ L+ L L + A P + L+ L++ N + ++
Sbjct: 315 SPRSFYGLSN-LRYLSLKRAFTKQSVSLASHPNIDDFSFQWLKYLEYLNMDDNNIPSTKS 373
Query: 186 TSFKGLSSLNFLDLS--YNKLMTLSQDCLAPLV--TLRVLRLQGNRLTVSVVAALQGLRS 241
+F GL SL +L LS + L TL+ + L L L L N ++ L
Sbjct: 374 NTFTGLVSLKYLSLSKTFTSLQTLTNETFVSLAHSPLLTLNLTKNHISKIANGTFSWLGQ 433
Query: 242 VTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHH--- 298
+ LDL N + L L ++ + +++N++ + + A + L L
Sbjct: 434 LRILDLGLNEIEQKLSGQEWRGLRNIFEIYLSYNKYLQLSTSSFALVPSLQRLMLRRVAL 493
Query: 299 NQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQ---- 354
+D+ FR L L+ LDL++N I ++ L L NL LD HN L L +
Sbjct: 494 KNVDI-SPSPFRPLRNLTILDLSNNNIANINEDLLEGLENLEILDFQHNNLARLWKRANP 552
Query: 355 ----DLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELIYSGV 396
+ + L L L L+ N + P ++ N +L+ I G+
Sbjct: 553 GGPVNFLKGLSHLHILNLESNGLDEIPVGVFK--NLFELKSINLGL 596
Score = 61 (26.5 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 11/38 (28%), Positives = 21/38 (55%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
L +L +L +++N +++ L GL+ L L HN +
Sbjct: 506 LRNLTILDLSNNNIANINEDLLEGLENLEILDFQHNNL 543
Score = 45 (20.9 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 645 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID 682
S L L++ N S + G + L +L L N+I+
Sbjct: 408 SPLLTLNLTKNHISKIANGTFSWLGQLRILDLGLNEIE 445
Score = 41 (19.5 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 15/57 (26%), Positives = 25/57 (43%)
Query: 644 LSSLKVLSIAHNQFSSVRRGA--------LAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L +L++L HN + + + A L GL L L+ N +D + F N+
Sbjct: 530 LENLEILDFQHNNLARLWKRANPGGPVNFLKGLSHLHILNLESNGLDEIPVGVFKNL 586
>RGD|1309087 [details] [associations]
symbol:Lrrc32 "leucine rich repeat containing 32" species:10116
"Rattus norvegicus" [GO:0010628 "positive regulation of gene
expression" evidence=IEA] [GO:0046007 "negative regulation of
activated T cell proliferation" evidence=IEA] [GO:0050710 "negative
regulation of cytokine secretion" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 RGD:1309087 EMBL:CH473956
InterPro:IPR003591 SMART:SM00369 GO:GO:0010628 InterPro:IPR000372
SMART:SM00013 GO:GO:0046007 GO:GO:0050710
GeneTree:ENSGT00700000104185 CTD:2615 OMA:CCGNGWL OrthoDB:EOG4DBTF0
IPI:IPI00368447 RefSeq:NP_001163905.1 UniGene:Rn.66859
Ensembl:ENSRNOT00000020520 GeneID:293135 KEGG:rno:293135
UCSC:RGD:1309087 NextBio:635427 Uniprot:D3ZVD5
Length = 663
Score = 198 (74.8 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 71/236 (30%), Positives = 105/236 (44%)
Query: 166 LAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQG 225
L+ ++ L LS N+L + + ++L LDLS N++ L L L L L
Sbjct: 48 LSLDIQALYLSGNRLQSILVSPLSFYTALRHLDLSDNEISFLQPGVFQALPYLEHLNLAH 107
Query: 226 NRLTVSVVAALQGLRS---VTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRR 282
NRL + GL V LDLS N L G L + L+ LS+A N + + R
Sbjct: 108 NRLAAGMALNSGGLGRLPLVVSLDLSGNSLHGSLVERLLGEAPRLRTLSLAENSLTRLAR 167
Query: 283 GALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTL 342
G+ + L H N + +ED +F AL L+HL+L+ N + +S SL L L
Sbjct: 168 HTFWGMPAMEQLDLHSNVLMDIEDGAFEALPQLTHLNLSRNSLTCISDFSLQQLQ---VL 224
Query: 343 DLSHNFLRAL-TQDLITPLKSLQELRLDDN------DISMEPECIYVGFNTMDLEL 391
DLS N + T L L L +N D++M P IY+ + ++L
Sbjct: 225 DLSCNSIETFQTAPESQAQFQLAWLDLRENKLLHFPDLAMFPRLIYLNVSNNLIQL 280
Score = 188 (71.2 bits), Expect = 4.4e-12, Sum P(2) = 4.4e-12
Identities = 90/313 (28%), Positives = 137/313 (43%)
Query: 68 LPHTLRCTANKSDLY-AISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGV-TLHGLVI 125
LP + + + L+ ++ E L G P R+ L +++T L G+ + L +
Sbjct: 124 LPLVVSLDLSGNSLHGSLVERLLGEAP--RLRTLSLAENSLTRLARHTFWGMPAMEQLDL 181
Query: 126 SSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLEN 185
S L +I DGAF L L L L N L+ + +L L LDLS N + +
Sbjct: 182 HSNVLMDIEDGAFEALPQ-LTHLNLSRNSLTCISDFSLQ----QLQVLDLSCNSIETFQT 236
Query: 186 T-SFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGN--RLTVSVVAALQGLRSV 242
+ L +LDL NKL+ LA L L + N +L + + L +
Sbjct: 237 APESQAQFQLAWLDLRENKLLHFPD--LAMFPRLIYLNVSNNLIQLPTGLPQDSEDLHAP 294
Query: 243 TDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID 302
++ S +LL+ P +++ LS L L +++N+ V G L L L L+ N +
Sbjct: 295 SE-GWSASLLSNPSRNASIHPLSQLLNLDLSYNEIELVPAGFLEHLTSLRFLNLSRNCLR 353
Query: 303 VLEDHSFRALSTLSHLDLAHNRIVAVS-GASLAHLSNLTTLDLSHNFLRALTQDLITPLK 361
E +L L LDL+HN + A+ G + L +L TL L N LR L L
Sbjct: 354 SFEARRAGSLPCLVLLDLSHNVLEALELGTKV--LGSLKTLLLQDNTLRELPPYTFAGLA 411
Query: 362 SLQELRLDDNDIS 374
SLQ L L N +S
Sbjct: 412 SLQRLNLQGNQVS 424
Score = 170 (64.9 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 77/276 (27%), Positives = 125/276 (45%)
Query: 116 EGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDL 175
E L L ++ L ++ F G+ + ++ L L +N+L + A L P L L+L
Sbjct: 148 EAPRLRTLSLAENSLTRLARHTFWGMPA-MEQLDLHSNVLMDIEDGAFEAL-PQLTHLNL 205
Query: 176 SHNQLYKLENTSFKGLSSLNFLDLSYNKLMTL--SQDCLAPLVTLRVLRLQGNRLTVSVV 233
S N L + + S L L LDLS N + T + + A L L L+ N+L
Sbjct: 206 SRNSLTCISDFS---LQQLQVLDLSCNSIETFQTAPESQAQF-QLAWLDLRENKLLHFPD 261
Query: 234 AALQGLRSVTDLDLSHNLLAGPLG-PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLT 292
A+ + L++S+NL+ P G P L + A + R ++ L +L
Sbjct: 262 LAM--FPRLIYLNVSNNLIQLPTGLPQDSEDLHAPSEGWSASLLSNPSRNASIHPLSQLL 319
Query: 293 SLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRAL 352
+L +N+I+++ L++L L+L+ N + + L L LDLSHN L AL
Sbjct: 320 NLDLSYNEIELVPAGFLEHLTSLRFLNLSRNCLRSFEARRAGSLPCLVLLDLSHNVLEAL 379
Query: 353 TQDLITP-LKSLQELRLDDNDISMEPECIYVGFNTM 387
+L T L SL+ L L DN + P + G ++
Sbjct: 380 --ELGTKVLGSLKTLLLQDNTLRELPPYTFAGLASL 413
Score = 164 (62.8 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 67/214 (31%), Positives = 96/214 (44%)
Query: 141 LSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLS 200
LS +QAL L N L + S L+ L LDLS N++ L+ F+ L L L+L+
Sbjct: 48 LSLDIQALYLSGNRLQSILVSPLS-FYTALRHLDLSDNEISFLQPGVFQALPYLEHLNLA 106
Query: 201 YNKL---MTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQG-LRSVTDLDLSHNLLAGPL 256
+N+L M L+ L L + L L GN L S+V L G + L L+ N L L
Sbjct: 107 HNRLAAGMALNSGGLGRLPLVVSLDLSGNSLHGSLVERLLGEAPRLRTLSLAENSLTR-L 165
Query: 257 GPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLS 316
T + +++ L + N + GA L +LT L+ N + + D S + L L
Sbjct: 166 ARHTFWGMPAMEQLDLHSNVLMDIEDGAFEALPQLTHLNLSRNSLTCISDFSLQQLQVL- 224
Query: 317 HLDLAHNRIVAVSGASLAHLS-NLTTLDLSHNFL 349
DL+ N I A + L LDL N L
Sbjct: 225 --DLSCNSIETFQTAPESQAQFQLAWLDLRENKL 256
Score = 160 (61.4 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 66/200 (33%), Positives = 86/200 (43%)
Query: 185 NTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTD 244
N S LS L LDLSYN++ + L L +LR L L N L L +
Sbjct: 309 NASIHPLSQLLNLDLSYNEIELVPAGFLEHLTSLRFLNLSRNCLRSFEARRAGSLPCLVL 368
Query: 245 LDLSHNLL-AGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDV 303
LDLSHN+L A LG L SLK L + N + AGL L L+ NQ+
Sbjct: 369 LDLSHNVLEALELGTKV---LGSLKTLLLQDNTLRELPPYTFAGLASLQRLNLQGNQVSP 425
Query: 304 LEDHS---------FRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHN-FLRALT 353
+ F + TL L++A N + + S H + LT LDLS N L T
Sbjct: 426 CGGQAEPGPPGCVDFSGIPTLHFLNMAGNSMETLRAGSFLH-TPLTELDLSANPGLDVAT 484
Query: 354 QDLITPLKSLQELRLDDNDI 373
L+ SL+ L L N +
Sbjct: 485 GALVGLEASLEVLELQGNGL 504
Score = 132 (51.5 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 82/292 (28%), Positives = 120/292 (41%)
Query: 87 SLRGLE-PDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPL 145
+LR L+ D +S L + LP +LE + L +++G N S G +G +
Sbjct: 75 ALRHLDLSDNEISFLQPGVFQA--LP--YLEHLNLAHNRLAAGMALN-SGG--LGRLPLV 127
Query: 146 QALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLM 205
+L L N L L AP L L L+ N L +L +F G+ ++ LDL N LM
Sbjct: 128 VSLDLSGNSLHGSLVERLLGEAPRLRTLSLAENSLTRLARHTFWGMPAMEQLDLHSNVLM 187
Query: 206 TLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAG-PLGPSTVPRL 264
+ L L L L N LT +LQ L+ LDLS N + P + +
Sbjct: 188 DIEDGAFEALPQLTHLNLSRNSLTCISDFSLQQLQV---LDLSCNSIETFQTAPESQAQF 244
Query: 265 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDV-----LEDHSFRALSTLSHLD 319
L L + N+ + LA +L L+ +N I + + A S
Sbjct: 245 Q-LAWLDLRENKL--LHFPDLAMFPRLIYLNVSNNLIQLPTGLPQDSEDLHAPSEGWSAS 301
Query: 320 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
L N AS+ LS L LDLS+N + + + L SL+ L L N
Sbjct: 302 LLSN---PSRNASIHPLSQLLNLDLSYNEIELVPAGFLEHLTSLRFLNLSRN 350
Score = 127 (49.8 bits), Expect = 0.00017, P = 0.00017
Identities = 61/185 (32%), Positives = 88/185 (47%)
Query: 119 TLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSAL-APLA-------PNL 170
+L L++ L+ + F GL+S LQ L L N +S A P P L
Sbjct: 388 SLKTLLLQDNTLRELPPYTFAGLAS-LQRLNLQGNQVSPCGGQAEPGPPGCVDFSGIPTL 446
Query: 171 DRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPL-VTLRVLRLQGNRLT 229
L+++ N + L SF + L LDLS N + ++ L L +L VL LQGN L
Sbjct: 447 HFLNMAGNSMETLRAGSFLH-TPLTELDLSANPGLDVATGALVGLEASLEVLELQGNGLV 505
Query: 230 VSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLD 289
V V L R + L+L+ N L+ P+ R SL+VL + +N FS + A+ GL+
Sbjct: 506 VLRVD-LPCFRRLKRLNLAENRLSHL--PAWT-RAVSLEVLDLRNNSFSLLPGNAMGGLE 561
Query: 290 KLTSL 294
TSL
Sbjct: 562 --TSL 564
Score = 56 (24.8 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 628 NNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSL 674
N +++R L A T +S L+VL + +N FS + A+ GL+ TSL
Sbjct: 521 NLAENRLSHLPAWTRAVS-LEVLDLRNNSFSLLPGNAMGGLE--TSL 564
Score = 53 (23.7 bits), Expect = 7.1e-13, Sum P(2) = 7.1e-13
Identities = 15/45 (33%), Positives = 21/45 (46%)
Query: 637 LQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
L+ T +L SLK L + N + AGL L L+ NQ+
Sbjct: 379 LELGTKVLGSLKTLLLQDNTLRELPPYTFAGLASLQRLNLQGNQV 423
Score = 51 (23.0 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLE 685
L+SL+ L+++ N S L L L HN ++ LE
Sbjct: 339 LTSLRFLNLSRNCLRSFEARRAGSLPCLVLLDLSHNVLEALE 380
Score = 47 (21.6 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 17/49 (34%), Positives = 24/49 (48%)
Query: 637 LQATTILLSSLKVLSIAHNQFSSVRRGALAGLD-KLTSLSCHHNQIDVL 684
L+A + L + L L ++ N V GAL GL+ L L N + VL
Sbjct: 459 LRAGSFLHTPLTELDLSANPGLDVATGALVGLEASLEVLELQGNGLVVL 507
>UNIPROTKB|E9PCA3 [details] [associations]
symbol:RXFP1 "Relaxin receptor 1" species:9606 "Homo
sapiens" [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007188 "adenylate cyclase-modulating G-protein coupled
receptor signaling pathway" evidence=IEA] [GO:0007567 "parturition"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0042562 "hormone binding" evidence=IEA] [GO:0060427 "lung
connective tissue development" evidence=IEA] [GO:0060658 "nipple
morphogenesis" evidence=IEA] InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR008112 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR01739 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021
GO:GO:0030154 GO:GO:0004930 GO:GO:0007189 InterPro:IPR003591
SMART:SM00369 GO:GO:0030198 GO:GO:0042562 GO:GO:0007567
InterPro:IPR000372 SMART:SM00013 EMBL:AC107219 GO:GO:0060427
HGNC:HGNC:19718 GO:GO:0060658 EMBL:AC019341 EMBL:AC107056
EMBL:AC108017 EMBL:AC121161 EMBL:AC125489 IPI:IPI00965023
ProteinModelPortal:E9PCA3 SMR:E9PCA3 Ensembl:ENST00000460056
ArrayExpress:E9PCA3 Bgee:E9PCA3 Uniprot:E9PCA3
Length = 676
Score = 208 (78.3 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 75/255 (29%), Positives = 110/255 (43%)
Query: 144 PLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNK 203
P +A P L+ VP L L+ LD L + + S S++ + L +N
Sbjct: 6 PFEA-ETPECLVGSVPVQCLCQ---GLE-LDCDETNLRAVPSVS----SNVTAMSLQWNL 56
Query: 204 LMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPR 263
+ L DC L+ L LQ N++T + A +GL S+T L LSHN + L P
Sbjct: 57 IRKLPPDCFKNYHDLQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNRITF-LKPGVFED 115
Query: 264 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF-RALSTLSHLDLAH 322
L L+ L I N S + GL+ L L +N + L D + + L LDL
Sbjct: 116 LHRLEWLIIEDNHLSRISPPTFYGLNSLILLVLMNNVLTRLPDKPLCQHMPRLHWLDLEG 175
Query: 323 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYV 382
N I + + SNLT L + N + L ++ PL+ L EL L N I P I+
Sbjct: 176 NHIHNLRNLTFISCSNLTVLVMRKNKINHLNENTFAPLQKLDELDLGSNKIENLPPLIFK 235
Query: 383 GFNTMD-LELIYSGV 396
+ L L Y+ +
Sbjct: 236 DLKELSQLNLSYNPI 250
Score = 191 (72.3 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 63/234 (26%), Positives = 107/234 (45%)
Query: 141 LSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLS 200
+SS + A+ L NL+ +P +L +L L +N++ + +F+GL+SL L LS
Sbjct: 43 VSSNVTAMSLQWNLIRKLPPDCFKNYH-DLQKLYLQNNKITSISIYAFRGLNSLTKLYLS 101
Query: 201 YNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPST 260
+N++ L L L L ++ N L+ GL S+ L L +N+L
Sbjct: 102 HNRITFLKPGVFEDLHRLEWLIIEDNHLSRISPPTFYGLNSLILLVLMNNVLTRLPDKPL 161
Query: 261 VPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 320
+ L L + N ++R LT L N+I+ L +++F L L LDL
Sbjct: 162 CQHMPRLHWLDLEGNHIHNLRNLTFISCSNLTVLVMRKNKINHLNENTFAPLQKLDELDL 221
Query: 321 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 374
N+I + L L+ L+LS+N ++ + + L L+ L L+ +IS
Sbjct: 222 GSNKIENLPPLIFKDLKELSQLNLSYNPIQKIQANQFDYLVKLKSLSLEGIEIS 275
Score = 176 (67.0 bits), Expect = 8.2e-10, P = 8.2e-10
Identities = 74/268 (27%), Positives = 118/268 (44%)
Query: 100 LDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVP 159
LDC +N+ +P VT + + ++ + F LQ L L NN ++ +
Sbjct: 30 LDCDETNLRAVPS-VSSNVT--AMSLQWNLIRKLPPDCFKNYHD-LQKLYLQNNKITSIS 85
Query: 160 TSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLR 219
A L +L +L LSHN++ L+ F+ L L +L + N L +S L +L
Sbjct: 86 IYAFRGLN-SLTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDNHLSRISPPTFYGLNSLI 144
Query: 220 VLRLQGNRLTVSVVAAL-QGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFS 278
+L L N LT L Q + + LDL N + L T S+L VL + N+ +
Sbjct: 145 LLVLMNNVLTRLPDKPLCQHMPRLHWLDLEGNHIHN-LRNLTFISCSNLTVLVMRKNKIN 203
Query: 279 SVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSN 338
+ A L KL L N+I+ L F+ L LS L+L++N I + +L
Sbjct: 204 HLNENTFAPLQKLDELDLGSNKIENLPPLIFKDLKELSQLNLSYNPIQKIQANQFDYLVK 263
Query: 339 LTTLDLSHNFLRALTQDLITPLKSLQEL 366
L +L L + + Q + PL +L +
Sbjct: 264 LKSLSLEGIEISNIQQRMFRPLMNLSHI 291
Score = 45 (20.9 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 12/46 (26%), Positives = 21/46 (45%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
L L L++++N ++ L KL SLS +I ++ F
Sbjct: 237 LKELSQLNLSYNPIQKIQANQFDYLVKLKSLSLEGIEISNIQQRMF 282
>UNIPROTKB|A6H701 [details] [associations]
symbol:LRRTM2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050808 "synapse organization" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GeneTree:ENSGT00700000104056
HOGENOM:HOG000290681 HOVERGEN:HBG052362 CTD:26045 OMA:IRQCSMI
OrthoDB:EOG4PG60Z EMBL:DAAA02020406 EMBL:BC146061 IPI:IPI00709063
RefSeq:NP_001092847.1 UniGene:Bt.55901 Ensembl:ENSBTAT00000018866
GeneID:520949 KEGG:bta:520949 InParanoid:A6H701 NextBio:20873206
Uniprot:A6H701
Length = 516
Score = 204 (76.9 bits), Expect = 4.3e-13, P = 4.3e-13
Identities = 87/323 (26%), Positives = 143/323 (44%)
Query: 148 LGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTL 207
L L +N ++ + A + L L L HNQ+ ++ +F+GL L L LS NK+ L
Sbjct: 66 LSLRHNHITELERDQFASFS-QLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYL 124
Query: 208 SQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVP-RL-- 264
L+ L+ L L N+L+ GLR + L L N L T+P RL
Sbjct: 125 PNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLR------TIPVRLFW 178
Query: 265 --SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 322
SL+ L ++ N+ S+ R AGL KL L HNQ+ + F LS+L L L
Sbjct: 179 DCRSLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQW 238
Query: 323 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYV 382
N+I ++ L LDL+ N ++A+ + + +L+ L +D+N ++ I
Sbjct: 239 NKISNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILN 298
Query: 383 GFNTMDLELIYSGVWRHSTLLIPVMLSLCT-RSSVVTRYRYCVVL-----IEGSNILDQS 436
++ + +W S P + +L + S R+ + ++ +G +ILD
Sbjct: 299 SLRSLTTVGLSGNLWECS----PRICALASWLGSFQGRWEHSILCHSPDHTQGEDILDA- 353
Query: 437 ALVLGCSEILALVPTLTSQPLSY 459
V G L T+T+ +Y
Sbjct: 354 --VHGFQLCWNLSTTVTAMATTY 374
Score = 164 (62.8 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 42/120 (35%), Positives = 61/120 (50%)
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 317
P+T + SL LS+ HN + + R A +LT L HNQI +++ +F+ L L
Sbjct: 56 PNTTDK-GSLG-LSLRHNHITELERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKE 113
Query: 318 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEP 377
L L+ N+I + + L NL LDLS N L +L +L L+ LQ L L N + P
Sbjct: 114 LILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIP 173
Score = 149 (57.5 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 53/197 (26%), Positives = 93/197 (47%)
Query: 105 SNVTVLPGK-FLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSAL 163
+ + LP F + + L L +S +L ++ F GL LQ L L +N L +P
Sbjct: 119 NKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRK-LQTLHLRSNSLRTIPVRLF 177
Query: 164 APLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRL 223
+L+ LDLS N+L L F GL L L L +N+L ++ L +L L L
Sbjct: 178 WDCR-SLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFL 236
Query: 224 QGNRLTVSVVAALQGLRSVTD-LDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRR 282
Q N+++ ++ ++ + LDL+ N + + + + +LK+L + +N+ +S+
Sbjct: 237 QWNKIS-NLTCGMEWTWGTLEKLDLTGNEIKA-IDLTVFETMPNLKILLMDNNKLNSLDS 294
Query: 283 GALAGLDKLTSLSCHHN 299
L L LT++ N
Sbjct: 295 KILNSLRSLTTVGLSGN 311
Score = 70 (29.7 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 646 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
SL+ L ++ N+ S+ R AGL KL L HNQ+
Sbjct: 182 SLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQL 217
Score = 43 (20.2 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 12/41 (29%), Positives = 18/41 (43%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL 684
L L+ L + HNQ + + L L +L N+I L
Sbjct: 204 LIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNL 244
Score = 40 (19.1 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 10/36 (27%), Positives = 20/36 (55%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 679
+ +LK+L + +N+ +S+ L L LT++ N
Sbjct: 276 MPNLKILLMDNNKLNSLDSKILNSLRSLTTVGLSGN 311
>RGD|1598149 [details] [associations]
symbol:Vasn "vasorin" species:10116 "Rattus norvegicus"
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0005886 "plasma
membrane" evidence=ISO] [GO:0071456 "cellular response to hypoxia"
evidence=ISO] [GO:0071461 "cellular response to redox state"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50026 PROSITE:PS50853
PROSITE:PS51450 SMART:SM00060 SMART:SM00181 RGD:1598149
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00700000104056
CTD:114990 OMA:VTQLRPN OrthoDB:EOG4GTKD4 EMBL:CH474017
IPI:IPI00204993 RefSeq:NP_001102852.1 UniGene:Rn.198255
Ensembl:ENSRNOT00000005490 GeneID:679921 KEGG:rno:679921
UCSC:RGD:1598149 NextBio:717547 Uniprot:D3ZAE6
Length = 673
Score = 206 (77.6 bits), Expect = 4.3e-13, P = 4.3e-13
Identities = 78/256 (30%), Positives = 118/256 (46%)
Query: 102 CTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTS 161
CT T +P + + T+ GL I + + G F G LQ L L N ++ +P
Sbjct: 39 CTARQGTTVP-RDVPPDTV-GLYIFENGITTLDVGCFAGFPG-LQLLDLSQNQITSLPGG 95
Query: 162 ALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVL 221
PL NL LDL+ N+L+++ N +F+GL L L L N++ + L L L
Sbjct: 96 IFQPLV-NLSNLDLTANKLHEISNETFRGLRRLERLYLGKNRIRHIQPGAFDALDHLLEL 154
Query: 222 RLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVR 281
+L N L V + L L + LDLSHN + P + + ++++ L +A +
Sbjct: 155 KLPDNELRV--LPPLH-LPRLLLLDLSHNSI--PALEAGILDTANVEALRLAGLGLRQLD 209
Query: 282 RGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN-RIVAVSGASLAHLSNLT 340
G L L L NQ+ + + L L+ L LA N RI + LA L+ L
Sbjct: 210 EGLFGRLRNLHDLDVSDNQLGHMPS-VIQGLRGLTRLRLAGNTRIAQIRPEDLAGLTALQ 268
Query: 341 TLDLSHNFLRALTQDL 356
LD+S+ L+AL DL
Sbjct: 269 ELDVSNLSLQALPSDL 284
Score = 165 (63.1 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 56/180 (31%), Positives = 86/180 (47%)
Query: 202 NKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTV 261
N + TL C A L++L L N++T Q L ++++LDL+ N L + T
Sbjct: 63 NGITTLDVGCFAGFPGLQLLDLSQNQITSLPGGIFQPLVNLSNLDLTANKLH-EISNETF 121
Query: 262 PRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLED-HSFRALSTLSHLDL 320
L L+ L + N+ ++ GA LD L L N++ VL H L L LDL
Sbjct: 122 RGLRRLERLYLGKNRIRHIQPGAFDALDHLLELKLPDNELRVLPPLH----LPRLLLLDL 177
Query: 321 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECI 380
+HN I A+ A + +N+ L L+ LR L + L L++L +L + DN + P I
Sbjct: 178 SHNSIPALE-AGILDTANVEALRLAGLGLRQLDEGLFGRLRNLHDLDVSDNQLGHMPSVI 236
Score = 162 (62.1 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 64/212 (30%), Positives = 101/212 (47%)
Query: 168 PNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNR 227
P L LDLS NQ+ L F+ L +L+ LDL+ NKL +S + L L L L NR
Sbjct: 77 PGLQLLDLSQNQITSLPGGIFQPLVNLSNLDLTANKLHEISNETFRGLRRLERLYLGKNR 136
Query: 228 LTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGAL-- 285
+ A L + +L L N L L P +PRL +L ++HN ++ G L
Sbjct: 137 IRHIQPGAFDALDHLLELKLPDNELR-VLPPLHLPRLL---LLDLSHNSIPALEAGILDT 192
Query: 286 AGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLS 345
A ++ L Q+D + F L L LD++ N++ + + L LT L L+
Sbjct: 193 ANVEALRLAGLGLRQLD---EGLFGRLRNLHDLDVSDNQLGHMPSV-IQGLRGLTRLRLA 248
Query: 346 HNF-LRALTQDLITPLKSLQELRLDDNDISME 376
N + + + + L +LQEL D +++S++
Sbjct: 249 GNTRIAQIRPEDLAGLTALQEL--DVSNLSLQ 278
Score = 150 (57.9 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 60/221 (27%), Positives = 101/221 (45%)
Query: 87 SLRG--LEPDERVSLLDCTLSNVTVLPGKFLEGVT-LHGLVISSGELKNISDGAFIGLSS 143
SL G +P +S LD T + + + + G+ L L + +++I GAF L
Sbjct: 91 SLPGGIFQPLVNLSNLDLTANKLHEISNETFRGLRRLERLYLGKNRIRHIQPGAFDALDH 150
Query: 144 PLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNK 203
L+ L LP+N L V+P L P L LDLSHN + LE +++ L L+
Sbjct: 151 LLE-LKLPDNELRVLPPLHL----PRLLLLDLSHNSIPALE-AGILDTANVEALRLAGLG 204
Query: 204 LMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPR 263
L L + L L L + N+L + + +QGLR +T L L+ N + P +
Sbjct: 205 LRQLDEGLFGRLRNLHDLDVSDNQLG-HMPSVIQGLRGLTRLRLAGNTRIAQIRPEDLAG 263
Query: 264 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL 304
L++L+ L +++ ++ + +L L+ N + L
Sbjct: 264 LTALQELDVSNLSLQALPSDLSSLFPRLRLLAAARNPFNCL 304
Score = 136 (52.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 60/212 (28%), Positives = 86/212 (40%)
Query: 160 TSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLR 219
T+ + P+ L + N + L+ F G L LDLS N++ +L PLV L
Sbjct: 45 TTVPRDVPPDTVGLYIFENGITTLDVGCFAGFPGLQLLDLSQNQITSLPGGIFQPLVNLS 104
Query: 220 VLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSS 279
L L N+L +GLR + L L N + + P L L L + N+
Sbjct: 105 NLDLTANKLHEISNETFRGLRRLERLYLGKNRIRH-IQPGAFDALDHLLELKLPDNE--- 160
Query: 280 VRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNL 339
+R L +L L HN I LE + + L LA + + L NL
Sbjct: 161 LRVLPPLHLPRLLLLDLSHNSIPALEA-GILDTANVEALRLAGLGLRQLDEGLFGRLRNL 219
Query: 340 TTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
LD+S N L + +I L+ L LRL N
Sbjct: 220 HDLDVSDNQLGHMPS-VIQGLRGLTRLRLAGN 250
Score = 129 (50.5 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 50/170 (29%), Positives = 72/170 (42%)
Query: 208 SQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSL 267
S+ CL PL+ L +L L G+ V + G + + G P VP
Sbjct: 3 SRSCLPPLLLL-LLVLLGS----GVQSCPSGCQCNQPQTVFCTARQGTTVPRDVP--PDT 55
Query: 268 KVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVA 327
L I N +++ G AG L L NQI L F+ L LS+LDL N++
Sbjct: 56 VGLYIFENGITTLDVGCFAGFPGLQLLDLSQNQITSLPGGIFQPLVNLSNLDLTANKLHE 115
Query: 328 VSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEP 377
+S + L L L L N +R + L L EL+L DN++ + P
Sbjct: 116 ISNETFRGLRRLERLYLGKNRIRHIQPGAFDALDHLLELKLPDNELRVLP 165
Score = 120 (47.3 bits), Expect = 0.00098, P = 0.00098
Identities = 76/282 (26%), Positives = 108/282 (38%)
Query: 64 CACDLPHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGL 123
C C+ P T+ CTA + R + PD V L T+ G F L L
Sbjct: 29 CQCNQPQTVFCTARQGTTVP-----RDVPPDT-VGLYIFENGITTLDVGCFAGFPGLQLL 82
Query: 124 VISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKL 183
+S ++ ++ G F L + L L L N L + L L+RL L N++ +
Sbjct: 83 DLSQNQITSLPGGIFQPLVN-LSNLDLTANKLHEISNETFRGLR-RLERLYLGKNRIRHI 140
Query: 184 ENTSFKGLSSL-------N--------------FLDLSYNKLMTLSQDCLAPLVTLRVLR 222
+ +F L L N LDLS+N + L L + LR
Sbjct: 141 QPGAFDALDHLLELKLPDNELRVLPPLHLPRLLLLDLSHNSIPALEAGIL-DTANVEALR 199
Query: 223 LQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHN-QFSSVR 281
L G L LR++ DLD+S N L G + PS + L L L +A N + + +R
Sbjct: 200 LAGLGLRQLDEGLFGRLRNLHDLDVSDNQL-GHM-PSVIQGLRGLTRLRLAGNTRIAQIR 257
Query: 282 RGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 323
LAGL L L + + L L L A N
Sbjct: 258 PEDLAGLTALQELDVSNLSLQALPSDLSSLFPRLRLLAAARN 299
Score = 37 (18.1 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 11/41 (26%), Positives = 19/41 (46%)
Query: 644 LSSLKVLSIAHNQFSSVRRGAL--AGLDKLTSLSCHHNQID 682
L L +L ++HN ++ G L A ++ L Q+D
Sbjct: 169 LPRLLLLDLSHNSIPALEAGILDTANVEALRLAGLGLRQLD 209
>TAIR|locus:2122239 [details] [associations]
symbol:AT4G36180 species:3702 "Arabidopsis thaliana"
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005886 "plasma
membrane" evidence=ISM;IDA] [GO:0006468 "protein phosphorylation"
evidence=IEA;ISS] [GO:0007169 "transmembrane receptor protein
tyrosine kinase signaling pathway" evidence=ISS] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=RCA]
[GO:0000911 "cytokinesis by cell plate formation" evidence=RCA]
[GO:0002237 "response to molecule of bacterial origin"
evidence=RCA] [GO:0006260 "DNA replication" evidence=RCA]
[GO:0006306 "DNA methylation" evidence=RCA] [GO:0007165 "signal
transduction" evidence=RCA] [GO:0008283 "cell proliferation"
evidence=RCA] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA] [GO:0010014 "meristem initiation" evidence=RCA]
[GO:0010073 "meristem maintenance" evidence=RCA] [GO:0010075
"regulation of meristem growth" evidence=RCA] [GO:0010103 "stomatal
complex morphogenesis" evidence=RCA] [GO:0030244 "cellulose
biosynthetic process" evidence=RCA] [GO:0048443 "stamen
development" evidence=RCA] [GO:0051567 "histone H3-K9 methylation"
evidence=RCA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR008271 InterPro:IPR011009
Pfam:PF07714 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF56112 GO:GO:0004674
eggNOG:COG4886 Gene3D:2.60.120.200 InterPro:IPR013320 EMBL:AL161588
EMBL:AL022141 InterPro:IPR025875 Pfam:PF12799 HOGENOM:HOG000116551
InterPro:IPR013210 Pfam:PF08263 EMBL:FJ708764 EMBL:AY080606
IPI:IPI00531277 PIR:T04587 RefSeq:NP_195341.2 UniGene:At.2123
ProteinModelPortal:C0LGS2 SMR:C0LGS2 STRING:C0LGS2 PaxDb:C0LGS2
PRIDE:C0LGS2 EnsemblPlants:AT4G36180.1 GeneID:829775
KEGG:ath:AT4G36180 GeneFarm:2360 TAIR:At4g36180 InParanoid:O65510
OMA:NCSSLVH PhylomeDB:C0LGS2 ProtClustDB:CLSN2682550 Uniprot:C0LGS2
Length = 1136
Score = 192 (72.6 bits), Expect = 5.2e-13, Sum P(2) = 5.2e-13
Identities = 94/326 (28%), Positives = 132/326 (40%)
Query: 59 IKNDLCACDLPHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGV 118
+ +L + ++P + +L + SL G P V + C +V G L+G
Sbjct: 339 VSGNLFSGEIPPDIGNLKRLEELKLANNSLTGEIP---VEIKQCGSLDVLDFEGNSLKGQ 395
Query: 119 TLHGLVISSGELKNISDG--AFIGL--SS-----PLQALGL-PNNLLSVVPTSALAPLAP 168
L LK +S G +F G SS L+ L L NNL P +A
Sbjct: 396 IPEFLGYMKA-LKVLSLGRNSFSGYVPSSMVNLQQLERLNLGENNLNGSFPVELMA--LT 452
Query: 169 NLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRL 228
+L LDLS N+ S LS+L+FL+LS N + L L L L +
Sbjct: 453 SLSELDLSGNRFSGAVPVSISNLSNLSFLNLSGNGFSGEIPASVGNLFKLTALDLSKQNM 512
Query: 229 TVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGL 288
+ V L GL +V + L N +G + P L SL+ ++++ N FS L
Sbjct: 513 SGEVPVELSGLPNVQVIALQGNNFSGVV-PEGFSSLVSLRYVNLSSNSFSGEIPQTFGFL 571
Query: 289 DKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNF 348
L SLS N I S L L+L NR++ A L+ L L LDL N
Sbjct: 572 RLLVSLSLSDNHISGSIPPEIGNCSALEVLELRSNRLMGHIPADLSRLPRLKVLDLGQNN 631
Query: 349 LRALTQDLITPLKSLQELRLDDNDIS 374
L I+ SL L LD N +S
Sbjct: 632 LSGEIPPEISQSSSLNSLSLDHNHLS 657
Score = 189 (71.6 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 83/296 (28%), Positives = 129/296 (43%)
Query: 84 ISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSS 143
IS+ + GL ++SL + N T+ P L + + L A L+S
Sbjct: 84 ISDRISGLRMLRKLSLRSNSF-NGTI-PTSLAYCTRLLSVFLQYNSLSGKLPPAMRNLTS 141
Query: 144 PLQALGLPNNLLS-VVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYN 202
L+ + N LS +P L +L LD+S N + L+ L L+LSYN
Sbjct: 142 -LEVFNVAGNRLSGEIPVG----LPSSLQFLDISSNTFSGQIPSGLANLTQLQLLNLSYN 196
Query: 203 KLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVP 262
+L L L +L+ L L N L ++ +A+ S+ L S N + G + P+
Sbjct: 197 QLTGEIPASLGNLQSLQYLWLDFNLLQGTLPSAISNCSSLVHLSASENEIGGVI-PAAYG 255
Query: 263 RLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI-DVLEDHSFRALST-LSHLDL 320
L L+VLS+++N FS +L LT + N D++ + T L LDL
Sbjct: 256 ALPKLEVLSLSNNNFSGTVPFSLFCNTSLTIVQLGFNAFSDIVRPETTANCRTGLQVLDL 315
Query: 321 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISME 376
NRI L ++ +L LD+S N I LK L+EL+L +N ++ E
Sbjct: 316 QENRISGRFPLWLTNILSLKNLDVSGNLFSGEIPPDIGNLKRLEELKLANNSLTGE 371
Score = 188 (71.2 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 73/269 (27%), Positives = 112/269 (41%)
Query: 109 VLPGKFLEGVTLHGLVISSGELKN-ISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLA 167
V+P + L L +S+ + F S + LG N +V A
Sbjct: 249 VIPAAYGALPKLEVLSLSNNNFSGTVPFSLFCNTSLTIVQLGF-NAFSDIVRPETTANCR 307
Query: 168 PNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNR 227
L LDL N++ + SL LD+S N + L L L+L N
Sbjct: 308 TGLQVLDLQENRISGRFPLWLTNILSLKNLDVSGNLFSGEIPPDIGNLKRLEELKLANNS 367
Query: 228 LTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAG 287
LT + ++ S+ LD N L G + P + + +LKVLS+ N FS ++
Sbjct: 368 LTGEIPVEIKQCGSLDVLDFEGNSLKGQI-PEFLGYMKALKVLSLGRNSFSGYVPSSMVN 426
Query: 288 LDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHN 347
L +L L+ N ++ AL++LS LDL+ NR S+++LSNL+ L+LS N
Sbjct: 427 LQQLERLNLGENNLNGSFPVELMALTSLSELDLSGNRFSGAVPVSISNLSNLSFLNLSGN 486
Query: 348 FLRALTQDLITPLKSLQELRLDDNDISME 376
+ L L L L ++S E
Sbjct: 487 GFSGEIPASVGNLFKLTALDLSKQNMSGE 515
Score = 188 (71.2 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 78/273 (28%), Positives = 121/273 (44%)
Query: 87 SLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAF-------I 139
+L G P E ++L +LS + + +F V + +S+ N+S F +
Sbjct: 439 NLNGSFPVELMALT--SLSELDLSGNRFSGAVPVSISNLSNLSFLNLSGNGFSGEIPASV 496
Query: 140 GLSSPLQALGLPN-NLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLD 198
G L AL L N+ VP L+ L PN+ + L N + F L SL +++
Sbjct: 497 GNLFKLTALDLSKQNMSGEVPVE-LSGL-PNVQVIALQGNNFSGVVPEGFSSLVSLRYVN 554
Query: 199 LSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGP 258
LS N L L L L N ++ S+ + ++ L+L N L G + P
Sbjct: 555 LSSNSFSGEIPQTFGFLRLLVSLSLSDNHISGSIPPEIGNCSALEVLELRSNRLMGHI-P 613
Query: 259 STVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHL 318
+ + RL LKVL + N S ++ L SLS HN + + SF LS L+ +
Sbjct: 614 ADLSRLPRLKVLDLGQNNLSGEIPPEISQSSSLNSLSLDHNHLSGVIPGSFSGLSNLTKM 673
Query: 319 DLAHNRIVAVSGASLAHLS-NLTTLDLSHNFLR 350
DL+ N + ASLA +S NL ++S N L+
Sbjct: 674 DLSVNNLTGEIPASLALISSNLVYFNVSSNNLK 706
Score = 187 (70.9 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 76/264 (28%), Positives = 119/264 (45%)
Query: 138 FIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFL 197
F+G L+ L L N S S++ L L+RL+L N L L+SL+ L
Sbjct: 399 FLGYMKALKVLSLGRNSFSGYVPSSMVNLQ-QLERLNLGENNLNGSFPVELMALTSLSEL 457
Query: 198 DLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLG 257
DLS N+ ++ L L L L GN + + A++ L +T LDLS ++G +
Sbjct: 458 DLSGNRFSGAVPVSISNLSNLSFLNLSGNGFSGEIPASVGNLFKLTALDLSKQNMSGEV- 516
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 317
P + L +++V+++ N FS V + L L ++ N +F L L
Sbjct: 517 PVELSGLPNVQVIALQGNNFSGVVPEGFSSLVSLRYVNLSSNSFSGEIPQTFGFLRLLVS 576
Query: 318 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRA-LTQDLITPLKSLQELRLDDNDISME 376
L L+ N I + + S L L+L N L + DL + L L+ L L N++S E
Sbjct: 577 LSLSDNHISGSIPPEIGNCSALEVLELRSNRLMGHIPADL-SRLPRLKVLDLGQNNLSGE 635
Query: 377 --PECIYVG-FNTMDLELIY-SGV 396
PE N++ L+ + SGV
Sbjct: 636 IPPEISQSSSLNSLSLDHNHLSGV 659
Score = 155 (59.6 bits), Expect = 5.0e-09, Sum P(2) = 5.0e-09
Identities = 73/277 (26%), Positives = 118/277 (42%)
Query: 145 LQALGLPNNLLSVVPTSALAPLAPNLDRLD---LSHNQLYKLENTSFKGLSSLNFLDLSY 201
L+ L + NL S + P NL RL+ L++N L K SL+ LD
Sbjct: 334 LKNLDVSGNLFS----GEIPPDIGNLKRLEELKLANNSLTGEIPVEIKQCGSLDVLDFEG 389
Query: 202 NKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTV 261
N L + L + L+VL L N + V +++ L+ + L+L N L G P +
Sbjct: 390 NSLKGQIPEFLGYMKALKVLSLGRNSFSGYVPSSMVNLQQLERLNLGENNLNGSF-PVEL 448
Query: 262 PRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 321
L+SL L ++ N+FS +++ L L+ L+ N S L L+ LDL+
Sbjct: 449 MALTSLSELDLSGNRFSGAVPVSISNLSNLSFLNLSGNGFSGEIPASVGNLFKLTALDLS 508
Query: 322 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISME-PECI 380
+ L+ L N+ + L N + + + L SL+ + L N S E P+
Sbjct: 509 KQNMSGEVPVELSGLPNVQVIALQGNNFSGVVPEGFSSLVSLRYVNLSSNSFSGEIPQTF 568
Query: 381 YVGFNTMDLELIYSGVWRHSTLLIPVMLSLCTRSSVV 417
GF + + L S H + IP + C+ V+
Sbjct: 569 --GFLRLLVSLSLSD--NHISGSIPPEIGNCSALEVL 601
Score = 142 (55.0 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 61/223 (27%), Positives = 100/223 (44%)
Query: 190 GLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSH 249
GL L L L N LA L + LQ N L+ + A++ L S+ +++
Sbjct: 90 GLRMLRKLSLRSNSFNGTIPTSLAYCTRLLSVFLQYNSLSGKLPPAMRNLTSLEVFNVAG 149
Query: 250 NLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 309
N L+G + P +P SSL+ L I+ N FS LA L +L L+ +NQ+ S
Sbjct: 150 NRLSGEI-PVGLP--SSLQFLDISSNTFSGQIPSGLANLTQLQLLNLSYNQLTGEIPASL 206
Query: 310 RALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLD 369
L +L +L L N + +++++ S+L L S N + + L L+ L L
Sbjct: 207 GNLQSLQYLWLDFNLLQGTLPSAISNCSSLVHLSASENEIGGVIPAAYGALPKLEVLSLS 266
Query: 370 DNDIS-MEPECIYVGFNTMDLELIYSGVWRHSTLLIPVMLSLC 411
+N+ S P ++ NT L ++ G S ++ P + C
Sbjct: 267 NNNFSGTVPFSLFC--NT-SLTIVQLGFNAFSDIVRPETTANC 306
Score = 67 (28.6 bits), Expect = 5.2e-13, Sum P(2) = 5.2e-13
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 645 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
SSL LS+ HN S V G+ +GL LT + N +
Sbjct: 644 SSLNSLSLDHNHLSGVIPGSFSGLSNLTKMDLSVNNL 680
Score = 57 (25.1 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID 682
+ +LKVLS+ N FS ++ L +L L+ N ++
Sbjct: 403 MKALKVLSLGRNSFSGYVPSSMVNLQQLERLNLGENNLN 441
Score = 57 (25.1 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 16/49 (32%), Positives = 22/49 (44%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L LKVL + N S ++ L SLS HN + + SFS +
Sbjct: 619 LPRLKVLDLGQNNLSGEIPPEISQSSSLNSLSLDHNHLSGVIPGSFSGL 667
Score = 52 (23.4 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 18/58 (31%), Positives = 26/58 (44%)
Query: 624 DINRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
D+ N R+ L T IL SLK L ++ N FS + L +L L +N +
Sbjct: 314 DLQENRISGRF-PLWLTNIL--SLKNLDVSGNLFSGEIPPDIGNLKRLEELKLANNSL 368
Score = 51 (23.0 bits), Expect = 5.0e-11, Sum P(2) = 5.0e-11
Identities = 23/84 (27%), Positives = 40/84 (47%)
Query: 599 KICRTPRNSTIHHHACFIPVAQQEDDIN--RNNSDSRY-VKLQATTILLSSLKVLSIAHN 655
K+ RNS + + QQ + +N NN + + V+L A L+SL L ++ N
Sbjct: 407 KVLSLGRNSFSGYVPSSMVNLQQLERLNLGENNLNGSFPVELMA----LTSLSELDLSGN 462
Query: 656 QFSSVRRGALAGLDKLTSLSCHHN 679
+FS +++ L L+ L+ N
Sbjct: 463 RFSGAVPVSISNLSNLSFLNLSGN 486
Score = 47 (21.6 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSL 674
LS+L L+++ N FS ++ L KLT+L
Sbjct: 475 LSNLSFLNLSGNGFSGEIPASVGNLFKLTAL 505
Score = 42 (19.8 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
L SL+ ++++ N FS L L SLS N I
Sbjct: 547 LVSLRYVNLSSNSFSGEIPQTFGFLRLLVSLSLSDNHI 584
>UNIPROTKB|F1LN63 [details] [associations]
symbol:Tlr3 "Protein Tlr3" species:10116 "Rattus
norvegicus" [GO:0002756 "MyD88-independent toll-like receptor
signaling pathway" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004888 "transmembrane signaling
receptor activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007252 "I-kappaB phosphorylation" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0032722
"positive regulation of chemokine production" evidence=IEA]
[GO:0032728 "positive regulation of interferon-beta production"
evidence=IEA] [GO:0032735 "positive regulation of interleukin-12
production" evidence=IEA] [GO:0032755 "positive regulation of
interleukin-6 production" evidence=IEA] [GO:0032757 "positive
regulation of interleukin-8 production" evidence=IEA] [GO:0032760
"positive regulation of tumor necrosis factor production"
evidence=IEA] [GO:0034123 "positive regulation of toll-like
receptor signaling pathway" evidence=IEA] [GO:0034138 "toll-like
receptor 3 signaling pathway" evidence=IEA] [GO:0034346 "positive
regulation of type III interferon production" evidence=IEA]
[GO:0042346 "positive regulation of NF-kappaB import into nucleus"
evidence=IEA] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0045078 "positive regulation of
interferon-gamma biosynthetic process" evidence=IEA] [GO:0045080
"positive regulation of chemokine biosynthetic process"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0045356 "positive regulation of interferon-alpha biosynthetic
process" evidence=IEA] [GO:0045359 "positive regulation of
interferon-beta biosynthetic process" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0046330 "positive regulation of JNK
cascade" evidence=IEA] [GO:0050729 "positive regulation of
inflammatory response" evidence=IEA] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=IEA] [GO:0051607 "defense response to virus" evidence=IEA]
[GO:0071260 "cellular response to mechanical stimulus"
evidence=IEA] Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 RGD:735171 GO:GO:0016021 GO:GO:0005737 GO:GO:0006952
GO:GO:0043123 GO:GO:0046330 GO:GO:0045944 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0032722
GO:GO:0032755 GO:GO:0009615 GO:GO:0051092 GO:GO:0032757
GO:GO:0071260 InterPro:IPR000372 SMART:SM00013 GO:GO:0032760
GO:GO:0043330 GO:GO:0032735 GO:GO:0042346 GO:GO:0045078
InterPro:IPR026906 Pfam:PF13306 GO:GO:0032728 GO:GO:0007252
GO:GO:0045080 SUPFAM:SSF52200 GO:GO:0045359
GeneTree:ENSGT00680000099674 GO:GO:0034123 PANTHER:PTHR24365:SF5
GO:GO:0045356 GO:GO:0034346 OMA:WINKTHT IPI:IPI00382156
Ensembl:ENSRNOT00000035781 ArrayExpress:F1LN63 Uniprot:F1LN63
Length = 905
Score = 194 (73.4 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 78/290 (26%), Positives = 141/290 (48%)
Query: 96 RVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLL 155
R ++ DC+ +T +P +T+ L ++ +L+ + F S L L N +
Sbjct: 32 RYNVADCSHLKLTHIPDDLPSNITV--LNLTHNQLRGLPPANFTRYSQ-LALLDAGFNSI 88
Query: 156 SVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPL 215
S + L + P L L+L HN+L ++ + +F ++L L L N + + +
Sbjct: 89 SKLEPE-LCQILPLLKVLNLQHNELSQISDQTFAFCTNLTELHLMSNSIRKIKSNPFKNQ 147
Query: 216 VTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRL--SSLKVLSIA 273
+L L L N L+ + + L ++ +L L+ N + L + L SSL+ L ++
Sbjct: 148 KSLIKLDLSRNGLSSTKLGTGVQLENLQELLLAKNKIFA-LRSEELDFLGNSSLQKLDLS 206
Query: 274 HNQFSSVRRGALAGLDKLTSLSCHHNQIDV-LEDHSFRALSTLS--HLDLAHNRIVAVSG 330
N G + KL L ++ Q+++ L + LS S +L LA+N+++A S
Sbjct: 207 SNPLKEFSPGCFHAIGKLFVLLLNNAQLNLNLTEKLCWELSNTSIQNLSLANNQLLATSN 266
Query: 331 ASLAHL--SNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI-SMEP 377
++ + L +NLT+LDLS+N LR + D + L L+ L L+ N+I S+ P
Sbjct: 267 STFSGLKQTNLTSLDLSYNSLRYVGNDAFSWLPHLKYLSLEYNNIQSLTP 316
Score = 193 (73.0 bits), Expect = 7.4e-13, Sum P(2) = 7.4e-13
Identities = 89/310 (28%), Positives = 138/310 (44%)
Query: 78 KSDLYAI-SESLRGLEPDERVSLLDCTLSNVTVL-PGKFLEGVTLHGLVISSGELK-NIS 134
K+ ++A+ SE L L + + LD + + + PG F L L++++ +L N++
Sbjct: 181 KNKIFALRSEELDFLG-NSSLQKLDLSSNPLKEFSPGCFHAIGKLFVLLLNNAQLNLNLT 239
Query: 135 DGAFIGLSSP-LQALGLPNNLLSVVPTSALAPLAP-NLDRLDLSHNQLYKLENTSFKGLS 192
+ LS+ +Q L L NN L S + L NL LDLS+N L + N +F L
Sbjct: 240 EKLCWELSNTSIQNLSLANNQLLATSNSTFSGLKQTNLTSLDLSYNSLRYVGNDAFSWLP 299
Query: 193 SLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAA---------LQGLRSVT 243
L +L L YN + +L+ L LR L L+ SV A Q L+ +
Sbjct: 300 HLKYLSLEYNNIQSLTPHSFRGLSNLRYLSLKRAFTKQSVALASHPNIDDFSFQWLKCLE 359
Query: 244 DLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHN--QFSSVRRGALAGL--DKLTSLSCHHN 299
L++ N + G + +T L SLK LS++ ++ L L +L+ N
Sbjct: 360 HLNMDDNTIPG-IKSNTFTGLVSLKYLSLSKTFTGLQTLTNETFVSLTHSPLLTLNLTKN 418
Query: 300 QIDVLEDHSFRALSTLSHLDLAHNRIVA-VSGASLAHLSNLTTLDLSHNFLRALTQDLIT 358
I + +F L L LDL N I ++G L N+ + LS+N LT T
Sbjct: 419 HISKIASGTFSWLGQLRILDLGLNEIEQELTGQEWRGLGNIFEIYLSYNKYLQLTSKSFT 478
Query: 359 PLKSLQELRL 368
+ SLQ L L
Sbjct: 479 LVPSLQRLML 488
Score = 174 (66.3 bits), Expect = 8.5e-11, Sum P(2) = 8.5e-11
Identities = 68/239 (28%), Positives = 103/239 (43%)
Query: 166 LAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQG 225
L N+ L+L+HNQL L +F S L LD +N + L + L L+VL LQ
Sbjct: 50 LPSNITVLNLTHNQLRGLPPANFTRYSQLALLDAGFNSISKLEPELCQILPLLKVLNLQH 109
Query: 226 NRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGAL 285
N L+ ++T+L L N + + + SL L ++ N SS + G
Sbjct: 110 NELSQISDQTFAFCTNLTELHLMSNSIR-KIKSNPFKNQKSLIKLDLSRNGLSSTKLGTG 168
Query: 286 AGLDKLTSLSCHHNQIDVL--EDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLD 343
L+ L L N+I L E+ F S+L LDL+ N + S + L L
Sbjct: 169 VQLENLQELLLAKNKIFALRSEELDFLGNSSLQKLDLSSNPLKEFSPGCFHAIGKLFVLL 228
Query: 344 LSHNFLRA-LTQDLITPLK--SLQELRLDDNDISMEPECIYVGF---NTMDLELIYSGV 396
L++ L LT+ L L S+Q L L +N + + G N L+L Y+ +
Sbjct: 229 LNNAQLNLNLTEKLCWELSNTSIQNLSLANNQLLATSNSTFSGLKQTNLTSLDLSYNSL 287
Score = 150 (57.9 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 76/318 (23%), Positives = 132/318 (41%)
Query: 170 LDRLDLSHNQLYKLENTSFKGLSSLNFLDLS--YNKLMTLSQDCLAPLV--TLRVLRLQG 225
L+ L++ N + +++ +F GL SL +L LS + L TL+ + L L L L
Sbjct: 358 LEHLNMDDNTIPGIKSNTFTGLVSLKYLSLSKTFTGLQTLTNETFVSLTHSPLLTLNLTK 417
Query: 226 NRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGAL 285
N ++ L + LDL N + L L ++ + +++N++ + +
Sbjct: 418 NHISKIASGTFSWLGQLRILDLGLNEIEQELTGQEWRGLGNIFEIYLSYNKYLQLTSKSF 477
Query: 286 AGLDKLTSLSCHH---NQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTL 342
+ L L +D+ FR L L+ LDL++N I ++ L L NL L
Sbjct: 478 TLVPSLQRLMLRRVALKSVDI-SPSPFRPLYNLTILDLSNNNIANLNEDLLEGLENLEIL 536
Query: 343 DLSHNFLRALTQ--------DLITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELIYS 394
D HN L L + + + L L L L+ N + P ++ N +L+ I
Sbjct: 537 DFQHNNLARLWKHANPGGPVNFLKGLSHLHILNLESNGLDEIPVKVFK--NLFELKSINL 594
Query: 395 GVWRHSTLLIPV------MLSLCTRSSVVTRYRYCVV--LIEGSNILDQSALVLGCS-EI 445
G+ +TLL + + SL + +++T V N LD S C+ E
Sbjct: 595 GLNNLNTLLPSIFDDQTSLRSLNLQKNLITSVEKSVFGPAFHNLNSLDMSFNPFDCTCES 654
Query: 446 LALVPTLTSQPLSYVTSL 463
+A T +Q + + L
Sbjct: 655 IAWFVTWLNQTHTNIPEL 672
Score = 146 (56.5 bits), Expect = 9.8e-06, Sum P(2) = 9.8e-06
Identities = 75/278 (26%), Positives = 124/278 (44%)
Query: 115 LEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLP-NNLLSVVPTSALAPLAPNLDRL 173
L+ L L +S L+ + + AF L L+ L L NN+ S+ P S L+ NL L
Sbjct: 272 LKQTNLTSLDLSYNSLRYVGNDAFSWLPH-LKYLSLEYNNIQSLTPHS-FRGLS-NLRYL 328
Query: 174 DLSH---NQLYKL------ENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQ 224
L Q L ++ SF+ L L L++ N + + + LV+L+ L L
Sbjct: 329 SLKRAFTKQSVALASHPNIDDFSFQWLKCLEHLNMDDNTIPGIKSNTFTGLVSLKYLSLS 388
Query: 225 ----G-NRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSS 279
G LT +L +T L+L+ N ++ + T L L++L + N+
Sbjct: 389 KTFTGLQTLTNETFVSLTHSPLLT-LNLTKNHIS-KIASGTFSWLGQLRILDLGLNEIEQ 446
Query: 280 VRRGA-LAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI--VAVSGASLAHL 336
G GL + + +N+ L SF + +L L L + V +S + L
Sbjct: 447 ELTGQEWRGLGNIFEIYLSYNKYLQLTSKSFTLVPSLQRLMLRRVALKSVDISPSPFRPL 506
Query: 337 SNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 374
NLT LDLS+N + L +DL+ L++L+ L N+++
Sbjct: 507 YNLTILDLSNNNIANLNEDLLEGLENLEILDFQHNNLA 544
Score = 131 (51.2 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 60/220 (27%), Positives = 94/220 (42%)
Query: 96 RVSLLDCTLSNVTV-LPGKFLEGV-TLHGLVISSGELKNISDGAFIGLSSPLQALGLPNN 153
++ +LD L+ + L G+ G+ + + +S + ++ +F + S LQ L L
Sbjct: 433 QLRILDLGLNEIEQELTGQEWRGLGNIFEIYLSYNKYLQLTSKSFTLVPS-LQRLMLRRV 491
Query: 154 LLSVVPTSALAPLAP--NLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDC 211
L V S +P P NL LDLS+N + L +GL +L LD +N L L +
Sbjct: 492 ALKSVDISP-SPFRPLYNLTILDLSNNNIANLNEDLLEGLENLEILDFQHNNLARLWKHA 550
Query: 212 --------LAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPR 263
L L L +L L+ N L V + L + ++L N L L PS
Sbjct: 551 NPGGPVNFLKGLSHLHILNLESNGLDEIPVKVFKNLFELKSINLGLNNL-NTLLPSIFDD 609
Query: 264 LSSLKVLSIAHNQFSSVRRGALA-GLDKLTSLSCHHNQID 302
+SL+ L++ N +SV + L SL N D
Sbjct: 610 QTSLRSLNLQKNLITSVEKSVFGPAFHNLNSLDMSFNPFD 649
Score = 62 (26.9 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHS 688
L +L +L +++N +++ L GL+ L L HN + L H+
Sbjct: 506 LYNLTILDLSNNNIANLNEDLLEGLENLEILDFQHNNLARLWKHA 550
Score = 59 (25.8 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 15/45 (33%), Positives = 22/45 (48%)
Query: 645 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
++L L +++N V A + L L LS +N I L HSF
Sbjct: 275 TNLTSLDLSYNSLRYVGNDAFSWLPHLKYLSLEYNNIQSLTPHSF 319
Score = 44 (20.5 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 645 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID 682
S L L++ N S + G + L +L L N+I+
Sbjct: 408 SPLLTLNLTKNHISKIASGTFSWLGQLRILDLGLNEIE 445
Score = 42 (19.8 bits), Expect = 6.8e-11, Sum P(2) = 6.8e-11
Identities = 15/57 (26%), Positives = 25/57 (43%)
Query: 644 LSSLKVLSIAHNQFSSVRRGA--------LAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L +L++L HN + + + A L GL L L+ N +D + F N+
Sbjct: 530 LENLEILDFQHNNLARLWKHANPGGPVNFLKGLSHLHILNLESNGLDEIPVKVFKNL 586
>UNIPROTKB|Q9HBX9 [details] [associations]
symbol:RXFP1 "Relaxin receptor 1" species:9606 "Homo
sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007188
"adenylate cyclase-modulating G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0007567 "parturition" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0030198
"extracellular matrix organization" evidence=IEA] [GO:0042562
"hormone binding" evidence=IEA] [GO:0060427 "lung connective tissue
development" evidence=IEA] [GO:0060658 "nipple morphogenesis"
evidence=IEA] [GO:0004930 "G-protein coupled receptor activity"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=TAS]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002172
InterPro:IPR008112 InterPro:IPR017452 Pfam:PF00001 Pfam:PF00057
PRINTS:PR00237 PRINTS:PR01739 PROSITE:PS00237 PROSITE:PS50068
PROSITE:PS50262 PROSITE:PS51450 SMART:SM00192 GO:GO:0016021
GO:GO:0005886 Reactome:REACT_111102 GO:GO:0030154 GO:GO:0046872
GO:GO:0004930 GO:GO:0007189 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 GO:GO:0030198 GO:GO:0042562 EMBL:CH471056
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 GO:GO:0007567 InterPro:IPR000372 SMART:SM00013
GO:GO:0060427 EMBL:AF190500 EMBL:AY899848 EMBL:AY899849
EMBL:AY899850 EMBL:AK300379 EMBL:BC112142 EMBL:BC113617
IPI:IPI00012456 IPI:IPI00219888 IPI:IPI00654878 IPI:IPI00876893
RefSeq:NP_001240657.1 RefSeq:NP_001240658.1 RefSeq:NP_067647.2
UniGene:Hs.591686 PDB:2JM4 PDBsum:2JM4 ProteinModelPortal:Q9HBX9
SMR:Q9HBX9 MINT:MINT-231156 STRING:Q9HBX9 PhosphoSite:Q9HBX9
DMDM:166209887 PRIDE:Q9HBX9 DNASU:59350 Ensembl:ENST00000307765
Ensembl:ENST00000343542 Ensembl:ENST00000423548
Ensembl:ENST00000470033 Ensembl:ENST00000471616 GeneID:59350
KEGG:hsa:59350 UCSC:uc003ipz.3 UCSC:uc010iqm.3 UCSC:uc010iqo.3
CTD:59350 GeneCards:GC04P159236 H-InvDB:HIX0024561 HGNC:HGNC:19718
HPA:HPA027067 MIM:606654 neXtProt:NX_Q9HBX9 PharmGKB:PA134868312
HOVERGEN:HBG026354 InParanoid:Q9HBX9 KO:K04306 OMA:YTLTTRP
PhylomeDB:Q9HBX9 ChEMBL:CHEMBL1293316 EvolutionaryTrace:Q9HBX9
GenomeRNAi:59350 NextBio:65261 ArrayExpress:Q9HBX9 Bgee:Q9HBX9
CleanEx:HS_RXFP1 Genevestigator:Q9HBX9 GermOnline:ENSG00000171509
GO:GO:0060658 Uniprot:Q9HBX9
Length = 757
Score = 208 (78.3 bits), Expect = 5.9e-13, Sum P(2) = 5.9e-13
Identities = 75/255 (29%), Positives = 110/255 (43%)
Query: 144 PLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNK 203
P +A P L+ VP L L+ LD L + + S S++ + L +N
Sbjct: 87 PFEA-ETPECLVGSVPVQCLCQ---GLE-LDCDETNLRAVPSVS----SNVTAMSLQWNL 137
Query: 204 LMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPR 263
+ L DC L+ L LQ N++T + A +GL S+T L LSHN + L P
Sbjct: 138 IRKLPPDCFKNYHDLQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNRITF-LKPGVFED 196
Query: 264 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF-RALSTLSHLDLAH 322
L L+ L I N S + GL+ L L +N + L D + + L LDL
Sbjct: 197 LHRLEWLIIEDNHLSRISPPTFYGLNSLILLVLMNNVLTRLPDKPLCQHMPRLHWLDLEG 256
Query: 323 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYV 382
N I + + SNLT L + N + L ++ PL+ L EL L N I P I+
Sbjct: 257 NHIHNLRNLTFISCSNLTVLVMRKNKINHLNENTFAPLQKLDELDLGSNKIENLPPLIFK 316
Query: 383 GFNTMD-LELIYSGV 396
+ L L Y+ +
Sbjct: 317 DLKELSQLNLSYNPI 331
Score = 191 (72.3 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 63/234 (26%), Positives = 107/234 (45%)
Query: 141 LSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLS 200
+SS + A+ L NL+ +P +L +L L +N++ + +F+GL+SL L LS
Sbjct: 124 VSSNVTAMSLQWNLIRKLPPDCFKNYH-DLQKLYLQNNKITSISIYAFRGLNSLTKLYLS 182
Query: 201 YNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPST 260
+N++ L L L L ++ N L+ GL S+ L L +N+L
Sbjct: 183 HNRITFLKPGVFEDLHRLEWLIIEDNHLSRISPPTFYGLNSLILLVLMNNVLTRLPDKPL 242
Query: 261 VPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 320
+ L L + N ++R LT L N+I+ L +++F L L LDL
Sbjct: 243 CQHMPRLHWLDLEGNHIHNLRNLTFISCSNLTVLVMRKNKINHLNENTFAPLQKLDELDL 302
Query: 321 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 374
N+I + L L+ L+LS+N ++ + + L L+ L L+ +IS
Sbjct: 303 GSNKIENLPPLIFKDLKELSQLNLSYNPIQKIQANQFDYLVKLKSLSLEGIEIS 356
Score = 176 (67.0 bits), Expect = 9.7e-10, P = 9.7e-10
Identities = 74/268 (27%), Positives = 118/268 (44%)
Query: 100 LDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVP 159
LDC +N+ +P VT + + ++ + F LQ L L NN ++ +
Sbjct: 111 LDCDETNLRAVPS-VSSNVT--AMSLQWNLIRKLPPDCFKNYHD-LQKLYLQNNKITSIS 166
Query: 160 TSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLR 219
A L +L +L LSHN++ L+ F+ L L +L + N L +S L +L
Sbjct: 167 IYAFRGLN-SLTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDNHLSRISPPTFYGLNSLI 225
Query: 220 VLRLQGNRLTVSVVAAL-QGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFS 278
+L L N LT L Q + + LDL N + L T S+L VL + N+ +
Sbjct: 226 LLVLMNNVLTRLPDKPLCQHMPRLHWLDLEGNHIHN-LRNLTFISCSNLTVLVMRKNKIN 284
Query: 279 SVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSN 338
+ A L KL L N+I+ L F+ L LS L+L++N I + +L
Sbjct: 285 HLNENTFAPLQKLDELDLGSNKIENLPPLIFKDLKELSQLNLSYNPIQKIQANQFDYLVK 344
Query: 339 LTTLDLSHNFLRALTQDLITPLKSLQEL 366
L +L L + + Q + PL +L +
Sbjct: 345 LKSLSLEGIEISNIQQRMFRPLMNLSHI 372
Score = 45 (20.9 bits), Expect = 5.9e-13, Sum P(2) = 5.9e-13
Identities = 12/46 (26%), Positives = 21/46 (45%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 689
L L L++++N ++ L KL SLS +I ++ F
Sbjct: 318 LKELSQLNLSYNPIQKIQANQFDYLVKLKSLSLEGIEISNIQQRMF 363
>UNIPROTKB|Q940E8 [details] [associations]
symbol:fea2 "Fasciated ear2" species:4577 "Zea mays"
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0009908 "flower
development" evidence=IMP] [GO:0048509 "regulation of meristem
development" evidence=IMP] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 InterPro:IPR025875 Pfam:PF12799 InterPro:IPR013210
Pfam:PF08263 EMBL:AY055124 EMBL:BT042749 EMBL:CM000780
RefSeq:NP_001105662.1 UniGene:Zm.1097 GeneID:542675 KEGG:zma:542675
HOGENOM:HOG000239232 OMA:YLATWIG Uniprot:Q940E8
Length = 613
Score = 206 (77.6 bits), Expect = 6.1e-13, Sum P(2) = 6.1e-13
Identities = 79/240 (32%), Positives = 108/240 (45%)
Query: 153 NLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCL 212
NL V+P + LA L L LDLS N L S SL LDLS N L CL
Sbjct: 91 NLTGVIPAAPLA-LLRRLRTLDLSANALSGELPCSLP--RSLLALDLSRNALSGAVPTCL 147
Query: 213 -APLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTV--PRLSSLKV 269
+ L LR L L N L + + L + LDLS N ++G + P V P S+L +
Sbjct: 148 PSSLPALRTLNLSANFLRLPLSPRLSFPARLAALDLSRNAISGAVPPRIVADPDNSALLL 207
Query: 270 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 329
L ++HN+FS +A + L L NQ+ L+ L LDL++NR+
Sbjct: 208 LDLSHNRFSGEIPAGIAAVRSLQGLFLADNQLSGDIPPGIGNLTYLQVLDLSNNRLSGSV 267
Query: 330 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMDL 389
A LA L L L N L + + L SL+ L L +N IS E G ++++
Sbjct: 268 PAGLAGCFQLLYLQLGGNQLSGALRPELDALASLKVLDLSNNKISGEIPLPLAGCRSLEV 327
Score = 181 (68.8 bits), Expect = 7.0e-10, Sum P(2) = 7.0e-10
Identities = 75/238 (31%), Positives = 111/238 (46%)
Query: 141 LSSPLQALGLPNNLLS-VVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDL 199
L L AL L N LS VPT + L P L L+LS N L + + L LDL
Sbjct: 125 LPRSLLALDLSRNALSGAVPTCLPSSL-PALRTLNLSANFLRLPLSPRLSFPARLAALDL 183
Query: 200 SYNKLM-TLSQDCLA-P-LVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPL 256
S N + + +A P L +L L NR + + A + +RS+ L L+ N L+G +
Sbjct: 184 SRNAISGAVPPRIVADPDNSALLLLDLSHNRFSGEIPAGIAAVRSLQGLFLADNQLSGDI 243
Query: 257 GPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLS 316
P + L+ L+VL +++N+ S LAG +L L NQ+ AL++L
Sbjct: 244 PPG-IGNLTYLQVLDLSNNRLSGSVPAGLAGCFQLLYLQLGGNQLSGALRPELDALASLK 302
Query: 317 HLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 374
LDL++N+I LA +L +DLS N + + SL+ L L N +S
Sbjct: 303 VLDLSNNKISGEIPLPLAGCRSLEVVDLSGNEISGELSSAVAKWLSLKFLSLAGNQLS 360
Score = 153 (58.9 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 83/286 (29%), Positives = 123/286 (43%)
Query: 97 VSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLS 156
VSL T +V E ++L GL L + A + L L+ L L N LS
Sbjct: 65 VSLHPATAPAPSVTTPSVAE-LSLRGL-----NLTGVIPAAPLALLRRLRTLDLSANALS 118
Query: 157 -VVPTSALAPLAPNLDRLDLSHNQLYKLENTSF-KGLSSLNFLDLSYNKL-MTLSQDCLA 213
+P S L +L LDLS N L T L +L L+LS N L + LS
Sbjct: 119 GELPCS----LPRSLLALDLSRNALSGAVPTCLPSSLPALRTLNLSANFLRLPLSPRLSF 174
Query: 214 PLVTLRVLRLQGNRLTVSV---VAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVL 270
P L L L N ++ +V + A ++ LDLSHN +G + P+ + + SL+ L
Sbjct: 175 P-ARLAALDLSRNAISGAVPPRIVADPDNSALLLLDLSHNRFSGEI-PAGIAAVRSLQGL 232
Query: 271 SIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSG 330
+A NQ S + L L L +N++ L +L L N++
Sbjct: 233 FLADNQLSGDIPPGIGNLTYLQVLDLSNNRLSGSVPAGLAGCFQLLYLQLGGNQLSGALR 292
Query: 331 ASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISME 376
L L++L LDLS+N + + +SL+ + L N+IS E
Sbjct: 293 PELDALASLKVLDLSNNKISGEIPLPLAGCRSLEVVDLSGNEISGE 338
Score = 132 (51.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 59/189 (31%), Positives = 89/189 (47%)
Query: 92 EPDER-VSLLDCTLSNVT-VLPGKFLEGVTLHGLVISSGELK-NISDGAFIGLSSPLQAL 148
+PD + LLD + + + +P +L GL ++ +L +I G IG + LQ L
Sbjct: 199 DPDNSALLLLDLSHNRFSGEIPAGIAAVRSLQGLFLADNQLSGDIPPG--IGNLTYLQVL 256
Query: 149 GLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLS 208
L NN LS + LA L L L NQL L+SL LDLS NK+
Sbjct: 257 DLSNNRLSGSVPAGLAGCFQLL-YLQLGGNQLSGALRPELDALASLKVLDLSNNKISGEI 315
Query: 209 QDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLK 268
LA +L V+ L GN ++ + +A+ S+ L L+ N L+G L P + L+
Sbjct: 316 PLPLAGCRSLEVVDLSGNEISGELSSAVAKWLSLKFLSLAGNQLSGHL-PDWMFSFPLLQ 374
Query: 269 VLSIAHNQF 277
L ++ N+F
Sbjct: 375 WLDLSSNKF 383
Score = 44 (20.5 bits), Expect = 6.1e-13, Sum P(2) = 6.1e-13
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 646 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDV-LEDHSFS 690
SL+V+ ++ N+ S A+A L LS NQ+ L D FS
Sbjct: 324 SLEVVDLSGNEISGELSSAVAKWLSLKFLSLAGNQLSGHLPDWMFS 369
Score = 41 (19.5 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 679
+ L+ L+++ N + L G+ +L +L HN
Sbjct: 459 MKGLEYLNLSCNYLAGQIPAGLGGMGRLHTLDFSHN 494
>UNIPROTKB|F1NEL3 [details] [associations]
symbol:LGR4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA]
[GO:0030539 "male genitalia development" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0050673 "epithelial cell proliferation"
evidence=IEA] [GO:0061290 "canonical Wnt receptor signaling pathway
involved in metanephric kidney development" evidence=IEA]
[GO:0072202 "cell differentiation involved in metanephros
development" evidence=IEA] [GO:0072224 "metanephric glomerulus
development" evidence=IEA] [GO:0072282 "metanephric nephron tubule
morphogenesis" evidence=IEA] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 GO:GO:0045892
GO:GO:0045893 InterPro:IPR003591 SMART:SM00369 GO:GO:0090190
GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0016500 GeneTree:ENSGT00650000092962 OMA:DGYWSDC
EMBL:AADN02040116 EMBL:AADN02040117 EMBL:AADN02040118
EMBL:AADN02040119 IPI:IPI00595681 ProteinModelPortal:F1NEL3
Ensembl:ENSGALT00000019904 Uniprot:F1NEL3
Length = 1038
Score = 202 (76.2 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 87/324 (26%), Positives = 147/324 (45%)
Query: 71 TLRCTANKSDLYAI-SESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGE 129
+LR AN + A+ +S GL + L D +L+ V + P L +L L ++ +
Sbjct: 216 SLRLDANH--ITAVPKDSFEGLVQLRHLWLDDNSLTEVPIHPLSNLP--SLQALTLALNK 271
Query: 130 LKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFK 189
+ +I D AF LSS L L L NN + + L NL+ LDL++N + + + K
Sbjct: 272 ITHIPDYAFTNLSS-LVVLHLHNNKIKTIGKHCFDGL-DNLETLDLNYNNMVEFPE-AIK 328
Query: 190 GLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSH 249
L +L L N + + A LR++ L N L+ +A Q L +DL H
Sbjct: 329 ALPNLKELAFHSNYISIIPDGAFAGNPLLRMIHLYDNPLSFVGNSAFQNL---SDL---H 382
Query: 250 NL-LAGPLGPSTVPRLS---SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLE 305
+L + G P L+ +L+ L++ + +S+ L +L +N I L
Sbjct: 383 SLVIRGASMVQRFPNLTGTVNLESLTLTGTKINSIPVNLCQEQKMLRTLDLSYNNIKDLP 442
Query: 306 DHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQE 365
SF +L + L HN+I ++ + LS+L LDLS N + + ++ T + ++
Sbjct: 443 --SFTGCRSLEEISLQHNQIHEITDDTFQGLSSLRILDLSRNRICKIHKEAFTTIGAIVN 500
Query: 366 LRLDDNDISMEPECIYVGFNTMDL 389
L L N+++ P G N + L
Sbjct: 501 LDLSFNELTSVPTEGLSGLNQLKL 524
Score = 196 (74.1 bits), Expect = 6.4e-13, Sum P(2) = 6.4e-13
Identities = 76/267 (28%), Positives = 115/267 (43%)
Query: 100 LDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVP 159
+DC+ + +P L T L +S + + + AF L+ L L N LS +
Sbjct: 124 VDCSGRGLAAVPPG-LSAFT-QALDVSMNNITRLPEDAFKNFPY-LEELRLAGNDLSFIH 180
Query: 160 TSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLR 219
AL+ L L L L +NQL + N + +GLS L L L N + + +D LV LR
Sbjct: 181 PKALSGLK-ELKVLTLQNNQLKTVPNEAIRGLSGLQSLRLDANHITAVPKDSFEGLVQLR 239
Query: 220 VLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSS 279
L L N LT + L L S+ L L+ N + + LSSL VL + +N+ +
Sbjct: 240 HLWLDDNSLTEVPIHPLSNLPSLQALTLALNKITH-IPDYAFTNLSSLVVLHLHNNKIKT 298
Query: 280 VRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNL 339
+ + GLD L +L ++N + V + +AL L L N I + + A L
Sbjct: 299 IGKHCFDGLDNLETLDLNYNNM-VEFPEAIKALPNLKELAFHSNYISIIPDGAFAGNPLL 357
Query: 340 TTLDLSHNFLRALTQDLITPLKSLQEL 366
+ L N L + L L L
Sbjct: 358 RMIHLYDNPLSFVGNSAFQNLSDLHSL 384
Score = 183 (69.5 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 71/273 (26%), Positives = 119/273 (43%)
Query: 100 LDCTLSNVTVLPG-KFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVV 158
L L+ +T +P F +L L + + ++K I F GL + L+ L L N +
Sbjct: 265 LTLALNKITHIPDYAFTNLSSLVVLHLHNNKIKTIGKHCFDGLDN-LETLDLNYNNMVEF 323
Query: 159 PTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTL 218
P A+ L PNL L N + + + +F G L + L N L + L L
Sbjct: 324 P-EAIKAL-PNLKELAFHSNYISIIPDGAFAGNPLLRMIHLYDNPLSFVGNSAFQNLSDL 381
Query: 219 RVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFS 278
L ++G + V L G ++ L L+ + + + L+ L +++N
Sbjct: 382 HSLVIRGASM-VQRFPNLTGTVNLESLTLTGTKI-NSIPVNLCQEQKMLRTLDLSYNNIK 439
Query: 279 SVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSN 338
+ + G L +S HNQI + D +F+ LS+L LDL+ NRI + + +
Sbjct: 440 DLP--SFTGCRSLEEISLQHNQIHEITDDTFQGLSSLRILDLSRNRICKIHKEAFTTIGA 497
Query: 339 LTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 371
+ LDLS N L ++ + L L +L+L N
Sbjct: 498 IVNLDLSFNELTSVPTE---GLSGLNQLKLAGN 527
Score = 153 (58.9 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 55/203 (27%), Positives = 94/203 (46%)
Query: 219 RVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFS 278
+ L + N +T A + + +L L+ N L+ + P + L LKVL++ +NQ
Sbjct: 143 QALDVSMNNITRLPEDAFKNFPYLEELRLAGNDLSF-IHPKALSGLKELKVLTLQNNQLK 201
Query: 279 SVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSN 338
+V A+ GL L SL N I + SF L L HL L N + V L++L +
Sbjct: 202 TVPNEAIRGLSGLQSLRLDANHITAVPKDSFEGLVQLRHLWLDDNSLTEVPIHPLSNLPS 261
Query: 339 LTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFNTMD-LELIYSGV- 396
L L L+ N + + T L SL L L +N I + + G + ++ L+L Y+ +
Sbjct: 262 LQALTLALNKITHIPDYAFTNLSSLVVLHLHNNKIKTIGKHCFDGLDNLETLDLNYNNMV 321
Query: 397 -WRHSTLLIPVMLSLCTRSSVVT 418
+ + +P + L S+ ++
Sbjct: 322 EFPEAIKALPNLKELAFHSNYIS 344
Score = 126 (49.4 bits), Expect = 0.00038, P = 0.00038
Identities = 46/156 (29%), Positives = 75/156 (48%)
Query: 115 LEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLD 174
LE +TL G I+S + + L+ L L N + +P+ +L+ +
Sbjct: 404 LESLTLTGTKINSIPVNLCQE------QKMLRTLDLSYNNIKDLPSFTGCR---SLEEIS 454
Query: 175 LSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVA 234
L HNQ++++ + +F+GLSSL LDLS N++ + ++ + + L L N LT SV
Sbjct: 455 LQHNQIHEITDDTFQGLSSLRILDLSRNRICKIHKEAFTTIGAIVNLDLSFNELT-SVPT 513
Query: 235 ALQGLRSVTDLDLSHNL-LAGPLGPSTVPRLSSLKV 269
+GL + L L+ N L L +L SL V
Sbjct: 514 --EGLSGLNQLKLAGNSELKEALAAQNFAKLRSLSV 547
Score = 61 (26.5 bits), Expect = 6.4e-13, Sum P(2) = 6.4e-13
Identities = 13/47 (27%), Positives = 22/47 (46%)
Query: 646 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
SL+ +S+ HNQ + GL L L N+I + +F+ +
Sbjct: 449 SLEEISLQHNQIHEITDDTFQGLSSLRILDLSRNRICKIHKEAFTTI 495
Score = 55 (24.4 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 12/46 (26%), Positives = 22/46 (47%)
Query: 647 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L+ L +++N + + G L +S HNQI + D +F +
Sbjct: 428 LRTLDLSYNNIKDLP--SFTGCRSLEEISLQHNQIHEITDDTFQGL 471
Score = 54 (24.1 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 10/49 (20%), Positives = 24/49 (48%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
LSSL++L ++ N+ + + A + + +L N++ + S +
Sbjct: 471 LSSLRILDLSRNRICKIHKEAFTTIGAIVNLDLSFNELTSVPTEGLSGL 519
Score = 45 (20.9 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 15/48 (31%), Positives = 27/48 (56%)
Query: 624 DINRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSVRRGALAGLDKL 671
D++RN + K TTI ++ L ++ N+ +SV L+GL++L
Sbjct: 478 DLSRNRI-CKIHKEAFTTI--GAIVNLDLSFNELTSVPTEGLSGLNQL 522
>UNIPROTKB|Q8WUA8 [details] [associations]
symbol:TSKU "Tsukushin" species:9606 "Homo sapiens"
[GO:0021540 "corpus callosum morphogenesis" evidence=IEA]
[GO:0021670 "lateral ventricle development" evidence=IEA]
[GO:0021960 "anterior commissure morphogenesis" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005576 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 SMART:SM00013
CTD:25987 HOGENOM:HOG000001578 HOVERGEN:HBG054643 KO:K08130
OrthoDB:EOG4V171F EMBL:AF191019 EMBL:AY358317 EMBL:BT007440
EMBL:AK075476 EMBL:BC020975 EMBL:AL110276 IPI:IPI00641368
PIR:T14791 RefSeq:NP_001245139.1 RefSeq:NP_056331.2 UniGene:Hs.8361
ProteinModelPortal:Q8WUA8 SMR:Q8WUA8 MINT:MINT-1180605
STRING:Q8WUA8 DMDM:116242832 PRIDE:Q8WUA8 DNASU:25987
Ensembl:ENST00000333090 Ensembl:ENST00000527881 GeneID:25987
KEGG:hsa:25987 UCSC:uc001oxt.3 GeneCards:GC11P076494
HGNC:HGNC:28850 HPA:HPA008164 MIM:608015 neXtProt:NX_Q8WUA8
PharmGKB:PA162407150 InParanoid:Q8WUA8 OMA:LTRVDCS PhylomeDB:Q8WUA8
ChiTaRS:TSKU GenomeRNAi:25987 NextBio:47676 ArrayExpress:Q8WUA8
Bgee:Q8WUA8 CleanEx:HS_TSKU Genevestigator:Q8WUA8
GermOnline:ENSG00000182704 Uniprot:Q8WUA8
Length = 353
Score = 198 (74.8 bits), Expect = 6.7e-13, P = 6.7e-13
Identities = 78/240 (32%), Positives = 115/240 (47%)
Query: 148 LGLPNNLLSVVPTSALA-PLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMT 206
L L +N L +V S LA P L LDLSHN L + T+F L L LDLS+N L
Sbjct: 63 LDLSSNRLEMVNESVLAGPGYTTLAGLDLSHNLLTSISPTAFSRLRYLESLDLSHNGLTA 122
Query: 207 LSQDCL--APLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRL 264
L + +PL + + Q ++VS R++ +DLSHNL+ + T L
Sbjct: 123 LPAESFTSSPLSDVNLSHNQLREVSVSAFTTHSQGRAL-HVDLSHNLIHRLVPHPTRAGL 181
Query: 265 SS--LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 322
+ ++ L++A N+ +V L L L LS N + V+ +F L L+HL LA
Sbjct: 182 PAPTIQSLNLAWNRLHAVPN--LRDLP-LRYLSLDGNPLAVIGPGAFAGLGGLTHLSLAS 238
Query: 323 -NRIVAVSGASLAHLSNLTTLDLSHN-FLRALTQDLITPLKSLQELRLDDNDISMEPECI 380
R+ ++ + L L LDLS N L ++ + L SLQEL L ++ PE +
Sbjct: 239 LQRLPELAPSGFRELPGLQVLDLSGNPKLNWAGAEVFSGLSSLQELDLSGTNLVPLPEAL 298
Score = 192 (72.6 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 91/288 (31%), Positives = 137/288 (47%)
Query: 90 GLEPDERVSLLDCTLSNVTVLPGKF-LEGVTLHGLVISSGELKNISDGAFIGLS-SPLQA 147
GL ++ +DC+ ++P L+ T H L +SS L+ +++ G + L
Sbjct: 32 GLFDSFSLTRVDCSGLGPHIMPVPIPLD--TAH-LDLSSNRLEMVNESVLAGPGYTTLAG 88
Query: 148 LGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTL 207
L L +NLL+ + +A + L L+ LDLSHN L L SF S L+ ++LS+N+L +
Sbjct: 89 LDLSHNLLTSISPTAFSRLR-YLESLDLSHNGLTALPAESFTS-SPLSDVNLSHNQLREV 146
Query: 208 SQDCLAPLVTLRVLRLQ-GNRLTVSVVA--ALQGLRSVT--DLDLSHNLLAGPLGPSTVP 262
S R L + + L +V GL + T L+L+ N L VP
Sbjct: 147 SVSAFTTHSQGRALHVDLSHNLIHRLVPHPTRAGLPAPTIQSLNLAWNRL------HAVP 200
Query: 263 RLSSL--KVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQ-IDVLEDHSFRALSTLSHLD 319
L L + LS+ N + + GA AGL LT LS Q + L FR L L LD
Sbjct: 201 NLRDLPLRYLSLDGNPLAVIGPGAFAGLGGLTHLSLASLQRLPELAPSGFRELPGLQVLD 260
Query: 320 LAHNRIVAVSGASL-AHLSNLTTLDLSHNFLRALTQDLITPLKSLQEL 366
L+ N + +GA + + LS+L LDLS L L + L+ L +LQ +
Sbjct: 261 LSGNPKLNWAGAEVFSGLSSLQELDLSGTNLVPLPEALLLHLPALQSV 308
Score = 155 (59.6 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 77/249 (30%), Positives = 114/249 (45%)
Query: 106 NVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAP 165
N +VL G TL GL +S L +IS AF L L++L L +N L+ +P +
Sbjct: 74 NESVLAGPGY--TTLAGLDLSHNLLTSISPTAFSRLRY-LESLDLSHNGLTALPAESFTS 130
Query: 166 LAPNLDRLDLSHNQLYKLENTSFKGLSSLNFL--DLSYN---KLMTLSQDCLAPLVTLRV 220
+P L ++LSHNQL ++ ++F S L DLS+N +L+ P T++
Sbjct: 131 -SP-LSDVNLSHNQLREVSVSAFTTHSQGRALHVDLSHNLIHRLVPHPTRAGLPAPTIQS 188
Query: 221 LRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQ-FSS 279
L L NRL V L+ L + L L N LA +GP L L LS+A Q
Sbjct: 189 LNLAWNRL--HAVPNLRDL-PLRYLSLDGNPLA-VIGPGAFAGLGGLTHLSLASLQRLPE 244
Query: 280 VRRGALAGLDKLTSLSCHHN-QIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSN 338
+ L L L N +++ F LS+L LDL+ +V + A L HL
Sbjct: 245 LAPSGFRELPGLQVLDLSGNPKLNWAGAEVFSGLSSLQELDLSGTNLVPLPEALLLHLPA 304
Query: 339 LTTLDLSHN 347
L ++ + +
Sbjct: 305 LQSVSVGQD 313
Score = 127 (49.8 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 69/238 (28%), Positives = 102/238 (42%)
Query: 63 LCACDLPHTLRCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHG 122
L DL H L + + + A S LR LE LD + + +T LP + L
Sbjct: 86 LAGLDLSHNLLTSISPT---AFSR-LRYLES------LDLSHNGLTALPAESFTSSPLSD 135
Query: 123 LVISSGELKNISDGAFIGLSSPLQAL--GLPNNLLS-VVPTSALAPL-APNLDRLDLSHN 178
+ +S +L+ +S AF S +AL L +NL+ +VP A L AP + L+L+ N
Sbjct: 136 VNLSHNQLREVSVSAFTTHSQG-RALHVDLSHNLIHRLVPHPTRAGLPAPTIQSLNLAWN 194
Query: 179 QLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQG-NRLTVSVVAALQ 237
+L+ + N + L L +L L N L + A L L L L RL + +
Sbjct: 195 RLHAVPN--LRDLP-LRYLSLDGNPLAVIGPGAFAGLGGLTHLSLASLQRLPELAPSGFR 251
Query: 238 GLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLS 295
L + LDLS N G LSSL+ L ++ + L L L S+S
Sbjct: 252 ELPGLQVLDLSGNPKLNWAGAEVFSGLSSLQELDLSGTNLVPLPEALLLHLPALQSVS 309
>RGD|1308668 [details] [associations]
symbol:Lingo1 "leucine rich repeat and Ig domain containing 1"
species:10116 "Rattus norvegicus" [GO:0005154 "epidermal growth
factor receptor binding" evidence=ISO] [GO:0021954 "central nervous
system neuron development" evidence=ISO] [GO:0031175 "neuron
projection development" evidence=ISO] [GO:0043491 "protein kinase B
signaling cascade" evidence=ISO] [GO:0048715 "negative regulation
of oligodendrocyte differentiation" evidence=ISO]
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 RGD:1308668 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0043491
GO:GO:0031175 InterPro:IPR013098 Pfam:PF07679 GO:GO:0021954
MEROPS:I43.001 GO:GO:0048715 HOGENOM:HOG000246971 OrthoDB:EOG40S0F8
CTD:84894 HOVERGEN:HBG057546 RefSeq:NP_001094192.1 UniGene:Rn.20269
GeneID:315691 KEGG:rno:315691 NextBio:669664 EMBL:BC092632
IPI:IPI00766651 ProteinModelPortal:Q562A6 STRING:Q562A6
PhosphoSite:Q562A6 UCSC:RGD:1308668 InParanoid:Q562A6
Genevestigator:Q562A6 Uniprot:Q562A6
Length = 517
Score = 202 (76.2 bits), Expect = 7.2e-13, P = 7.2e-13
Identities = 76/276 (27%), Positives = 127/276 (46%)
Query: 109 VLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAP 168
V PG F L L + S LK I G F GLS+ L L + N + ++ L
Sbjct: 7 VEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSN-LTKLDISENKIVILLDYMFQDLY- 64
Query: 169 NLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRL 228
NL L++ N L + + +F GL+SL L L L ++ + L+ L L VLRL+ L
Sbjct: 65 NLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLR--HL 122
Query: 229 TVSVVA--ALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALA 286
++ + + + L + L++SH + P+ + L+ L LSI H ++V A+
Sbjct: 123 NINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLN-LTSLSITHCNLTAVPYLAVR 181
Query: 287 GLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSH 346
L L L+ +N I +E L L + L ++ V + L+ L L++S
Sbjct: 182 HLVYLRFLNLSYNPIGTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSG 241
Query: 347 NFLRALTQDLITPLKSLQELRLDDNDISMEPECIYV 382
N L L + + +L+ L LD N ++ + ++V
Sbjct: 242 NQLTTLEESAFHSVGNLETLILDSNPLACDCRLLWV 277
Score = 187 (70.9 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 67/235 (28%), Positives = 107/235 (45%)
Query: 153 NLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCL 212
N++S V A L NL L L N+L + F GLS+L LD+S NK++ L
Sbjct: 2 NIVSAVEPGAFNNLF-NLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMF 60
Query: 213 APLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSH-NLLAGPLGPSTVPRLSSLKVLS 271
L L+ L + N L A GL S+ L L NL + P + L L VL
Sbjct: 61 QDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPT--EALSHLHGLIVLR 118
Query: 272 IAHNQFSSVRRGALAGLDKLTSLSCHH-NQIDVLEDHSFRALSTLSHLDLAHNRIVAVSG 330
+ H +++R + L +L L H +D + + L+ L+ L + H + AV
Sbjct: 119 LRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLN-LTSLSITHCNLTAVPY 177
Query: 331 ASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIYVGFN 385
++ HL L L+LS+N + + ++ L LQE++L +++ + G N
Sbjct: 178 LAVRHLVYLRFLNLSYNPIGTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLN 232
Score = 178 (67.7 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 68/226 (30%), Positives = 110/226 (48%)
Query: 100 LDCTLSNVTVLPGKFLEGV-TLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVV 158
LD + + + +L + + L L + +L IS AF GL+S L+ L L L+ +
Sbjct: 45 LDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNS-LEQLTLEKCNLTSI 103
Query: 159 PTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSY-NKLMTLSQDCLAPLVT 217
PT AL+ L L L L H + + + SFK L L L++S+ L T++ +CL L
Sbjct: 104 PTEALSHLH-GLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGL-N 161
Query: 218 LRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQF 277
L L + LT A++ L + L+LS+N + G + S + L L+ + + Q
Sbjct: 162 LTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPI-GTIEGSMLHELLRLQEIQLVGGQL 220
Query: 278 SSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 323
+ V A GL+ L L+ NQ+ LE+ +F ++ L L L N
Sbjct: 221 AVVEPYAFRGLNYLRVLNVSGNQLTTLEESAFHSVGNLETLILDSN 266
Score = 145 (56.1 bits), Expect = 9.9e-08, Sum P(2) = 9.9e-08
Identities = 52/216 (24%), Positives = 99/216 (45%)
Query: 178 NQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQ 237
N + +E +F L +L L L N+L + L L L + N++ + + Q
Sbjct: 2 NIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQ 61
Query: 238 GLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCH 297
L ++ L++ N L + L+SL+ L++ +S+ AL+ L L L
Sbjct: 62 DLYNLKSLEVGDNDLVY-ISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLR 120
Query: 298 HNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLI 357
H I+ + D+SF+ L L L+++H + + + NLT+L ++H L A+ +
Sbjct: 121 HLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAV 180
Query: 358 TPLKSLQELRLDDNDI-SMEPECIYVGFNTMDLELI 392
L L+ L L N I ++E ++ +++L+
Sbjct: 181 RHLVYLRFLNLSYNPIGTIEGSMLHELLRLQEIQLV 216
Score = 136 (52.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 62/214 (28%), Positives = 101/214 (47%)
Query: 67 DLPHTLRCTANKSDLYAISE-SLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLVI 125
DL + +DL IS + GL E+++L C N+T +P + L LHGL++
Sbjct: 62 DLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKC---NLTSIPTEALSH--LHGLIV 116
Query: 126 SSGELKNIS---DGAFIGLSSPLQALGLPN-NLLSVVPTSALAPLAPNLDRLDLSHNQLY 181
NI+ D +F L L+ L + + L + + L L NL L ++H L
Sbjct: 117 LRLRHLNINAIRDYSFKRLYR-LKVLEISHWPYLDTMTPNCLYGL--NLTSLSITHCNLT 173
Query: 182 KLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRS 241
+ + + L L FL+LSYN + T+ L L+ L+ ++L G +L V A +GL
Sbjct: 174 AVPYLAVRHLVYLRFLNLSYNPIGTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNY 233
Query: 242 VTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHN 275
+ L++S N L L S + +L+ L + N
Sbjct: 234 LRVLNVSGNQLT-TLEESAFHSVGNLETLILDSN 266
Score = 111 (44.1 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 50/206 (24%), Positives = 91/206 (44%)
Query: 275 NQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLA 334
N S+V GA L L +L N++ ++ F LS L+ LD++ N+IV +
Sbjct: 2 NIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQ 61
Query: 335 HLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEP-ECIYVGFNTMDLELIY 393
L NL +L++ N L ++ + L SL++L L+ +++ P E + + L L +
Sbjct: 62 DLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRH 121
Query: 394 SGV-----WRHSTLLIPVMLSLCTRSSVVTRYRYCVVLIEGSNILDQSALVLGCSEILAL 448
+ + L +L + + T C+ G N+ S + C+ L
Sbjct: 122 LNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLY---GLNLTSLS--ITHCN--LTA 174
Query: 449 VPTLTSQPLSYVTSLRANVTGLGTVQ 474
VP L + L Y+ L + +GT++
Sbjct: 175 VPYLAVRHLVYLRFLNLSYNPIGTIE 200
Score = 56 (24.8 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L L+ + + Q + V A GL+ L L+ NQ+ LE+ +F +V
Sbjct: 207 LLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESAFHSV 255
Score = 46 (21.3 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 10/38 (26%), Positives = 21/38 (55%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 681
L+ L+VL+++ NQ +++ A + L +L N +
Sbjct: 231 LNYLRVLNVSGNQLTTLEESAFHSVGNLETLILDSNPL 268
>TAIR|locus:2010326 [details] [associations]
symbol:PIRL3 "AT1G12970" species:3702 "Arabidopsis
thaliana" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IDA] [GO:0046777 "protein autophosphorylation"
evidence=IDA] InterPro:IPR001611 PROSITE:PS51450 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0004674 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GO:GO:0046777 InterPro:IPR025875
Pfam:PF12799 HSSP:P07359 HOGENOM:HOG000239210
ProtClustDB:CLSN2686671 EMBL:AY062103 EMBL:AY124880 EMBL:AY849573
IPI:IPI00528676 RefSeq:NP_563921.1 UniGene:At.27354
ProteinModelPortal:Q8W4Q3 SMR:Q8W4Q3 PaxDb:Q8W4Q3 PRIDE:Q8W4Q3
EnsemblPlants:AT1G12970.1 GeneID:837855 KEGG:ath:AT1G12970
TAIR:At1g12970 InParanoid:Q8W4Q3 OMA:WEEMVEE PhylomeDB:Q8W4Q3
Genevestigator:Q8W4Q3 Uniprot:Q8W4Q3
Length = 464
Score = 201 (75.8 bits), Expect = 7.3e-13, P = 7.3e-13
Identities = 78/250 (31%), Positives = 126/250 (50%)
Query: 130 LKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFK 189
+K+ DG + + + L ++ L ++P AL + L L++S N L L +T
Sbjct: 154 IKDAEDGGVV------ERIDLSDHELKLLP-DALGKIV-GLVSLNVSRNNLRFLPDT-IS 204
Query: 190 GLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSH 249
GL L LDLS N+L+ L D + L+ LR+L + GN+LT+ + Q RS+ +LD S
Sbjct: 205 GLEKLEELDLSSNRLVFLP-DSIGLLLNLRILNVTGNKLTLLPESIAQ-CRSLVELDASF 262
Query: 250 NLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF 309
N L L + L +L+ LSI N+ ++ + L L H N+I L
Sbjct: 263 NNLTS-LPANFGYGLLNLERLSIQLNKIRFFPN-SICEMRSLRYLDAHMNEIHGLPIAIG 320
Query: 310 RALSTLSHLDLAHNRIVAVS-GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRL 368
R L+ L ++L+ N + +++ L+NL LDLS+N +R L D L+ L++L L
Sbjct: 321 R-LTNLEVMNLSSNFSDLIELPDTISDLANLRELDLSNNQIRVLP-DSFFRLEKLEKLNL 378
Query: 369 DDNDISMEPE 378
D N + P+
Sbjct: 379 DQNPLEYPPQ 388
>ZFIN|ZDB-GENE-030722-3 [details] [associations]
symbol:slit1a "slit homolog 1a (Drosophila)"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007411 "axon guidance" evidence=NAS] [GO:0005576
"extracellular region" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IMP] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152
ZFIN:ZDB-GENE-030722-3 GO:GO:0007411 GO:GO:0005576
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 GO:GO:0045773 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 Pfam:PF12661
GO:GO:0051964 Pfam:PF01463 HOVERGEN:HBG057959 KO:K06838
EMBL:DQ177286 IPI:IPI00506990 RefSeq:NP_001030140.1
UniGene:Dr.88478 ProteinModelPortal:Q3S2J2 SMR:Q3S2J2 STRING:Q3S2J2
GeneID:556123 KEGG:dre:556123 CTD:556123 NextBio:20881326
Uniprot:Q3S2J2
Length = 1524
Score = 170 (64.9 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 79/336 (23%), Positives = 144/336 (42%)
Query: 67 DLP-HTLRCTANKSDLYAISES-LRGLEPDERVSLLDCTLSNVTVLPGKFLEGVTLHGLV 124
++P +T R N ++L I+ + GL+ + L++ + VTV G F E L L
Sbjct: 51 NIPRNTERLELNGNNLTRINRNDFTGLKYLRVLQLMENQI--VTVERGAFDEMRELERLR 108
Query: 125 ISSGELKNISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLE 184
++ +L + + F ++ L L L N + +P A A ++ L L N + +E
Sbjct: 109 LNRNQLHQLPELLF-QKNAALSRLDLSENFIQAIPRKAFRG-ATDIKNLQLDKNHISCIE 166
Query: 185 NTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAAL--QGLRSV 242
+ +F+ + L L L+ N + ++ + LR RL N L V + Q LR
Sbjct: 167 DGAFRAMRGLEVLTLNNNNISSIPVSSFNHMPKLRTFRLHSNNLVCDCVLSWLSQWLRER 226
Query: 243 TDLDLSHNLLA-GPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSL-SCHHNQ 300
++ L + PL V + + S + S+V + ++ SC++N
Sbjct: 227 PNIGLFTQCSSPAPLRGLNVAEVQKHE-FSCSGQSDSAVGQSCSLSSGSCPAVCSCNNNI 285
Query: 301 IDVLEDHSFRALSTL----SHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDL 356
+D S+L + + L N I ++ + + L +DLS+N + L D
Sbjct: 286 VDCRGKGPTLIPSSLPDSMTEIRLEQNSIKSIPPGAFSPYKKLRRIDLSNNQISELAPDA 345
Query: 357 ITPLKSLQELRLDDNDISMEPECIYVGFNTMDLELI 392
L+SL L L N I+ P ++ G + + L L+
Sbjct: 346 FQGLRSLNSLVLYGNKITDLPRGVFDGLHALQLLLL 381
Score = 166 (63.5 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
Identities = 84/317 (26%), Positives = 135/317 (42%)
Query: 73 RCTANKSDLYAISESLRGLEPDERVSLLDCTLSNVTVLPGKFLEGVT-LHGLVISSGELK 131
R N++ L+ + E L + + +S LD + + + +P K G T + L + +
Sbjct: 106 RLRLNRNQLHQLPELL--FQKNAALSRLDLSENFIQAIPRKAFRGATDIKNLQLDKNHIS 163
Query: 132 NISDGAFIGLSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGL 191
I DGAF + L+ L L NN +S +P S+ + P L L N L + + L
Sbjct: 164 CIEDGAFRAMRG-LEVLTLNNNNISSIPVSSFNHM-PKLRTFRLHSNNL--VCDCVLSWL 219
Query: 192 SSLNFLDLSYNKLMTLSQDCL--APLVTLRVLRLQGNRLTVS-----VVAALQGLRSVTD 244
S L + L C APL L V +Q + + S V L S +
Sbjct: 220 SQW----LRERPNIGLFTQCSSPAPLRGLNVAEVQKHEFSCSGQSDSAVGQSCSLSSGSC 275
Query: 245 ---LDLSHNLL----AGP-LGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSC 296
++N++ GP L PS++P S+ + + N S+ GA + KL +
Sbjct: 276 PAVCSCNNNIVDCRGKGPTLIPSSLP--DSMTEIRLEQNSIKSIPPGAFSPYKKLRRIDL 333
Query: 297 HHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDL 356
+NQI L +F+ L +L+ L L N+I + L L L L+ N + L +
Sbjct: 334 SNNQISELAPDAFQGLRSLNSLVLYGNKITDLPRGVFDGLHALQLLLLNANKIHCLRANT 393
Query: 357 ITPLKSLQELRLDDNDI 373
L++L L L DN I
Sbjct: 394 FQDLQNLSLLSLYDNKI 410
Score = 157 (60.3 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 86/300 (28%), Positives = 144/300 (48%)
Query: 95 ERVSLLDCTLSNVTVLPGKFLEGVTLHGLVISSGELKNISDGAFIGLSSPLQALGLPNNL 154
++++L + +S + G F +++ L +++ +L G F GL L+ L L NN
Sbjct: 561 KKINLSNNKISEIE--DGAFEGASSVNELHLTANQLDLAHSGMFRGLEG-LRMLMLRNNR 617
Query: 155 LSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDC-LA 213
+S + ++ L N+ L L N L + +F L SL+ L+L N + +C LA
Sbjct: 618 ISCIHNNSFTGLH-NVRLLSLYDNTLTTIAPGAFDTLQSLSTLNLLANPF---NCNCRLA 673
Query: 214 PLVT-LRVLRL-QGN-RLTVSVVAALQGLRSVTDLDL----SHNLL--AGPLG-PSTVPR 263
L + LR ++ GN R L+ V D H + A P+ P+
Sbjct: 674 WLSSWLRNRKIVTGNPRCHRPAFLKEIPLQDVAAPDFRCEDDHEDVSCAPPVHCPADCTC 733
Query: 264 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL--EDHSFRALSTLSHLDLA 321
L S+ S H Q ++ +G + T L NQ+ + E SF++L + DL+
Sbjct: 734 LESVVRCSNKHLQ--ALPKGTPRNI---TELYLDGNQLSTVPKELSSFKSLQLV---DLS 785
Query: 322 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMEPECIY 381
+NRI +++ +S ++S LTTL LS+N LR + + L+SL+ L L NDIS P+ I+
Sbjct: 786 NNRISSLTNSSFTNMSQLTTLILSYNALRCIPTLAFSGLRSLRLLSLHGNDISELPDGIF 845
Score = 146 (56.5 bits), Expect = 7.8e-13, Sum P(3) = 7.8e-13
Identities = 42/137 (30%), Positives = 68/137 (49%)
Query: 141 LSSPLQALGLPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLS 200
L + + L N + +P A +P L R+DLS+NQ+ +L +F+GL SLN L L
Sbjct: 300 LPDSMTEIRLEQNSIKSIPPGAFSPYK-KLRRIDLSNNQISELAPDAFQGLRSLNSLVLY 358
Query: 201 YNKLMTLSQDCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPST 260
NK+ L + L L++L L N++ Q L++++ L L N + L T
Sbjct: 359 GNKITDLPRGVFDGLHALQLLLLNANKIHCLRANTFQDLQNLSLLSLYDNKIQ-TLAKGT 417
Query: 261 VPRLSSLKVLSIAHNQF 277
L +++ L +A N F
Sbjct: 418 FSSLRAIQTLHLAQNPF 434
Score = 140 (54.3 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 38/129 (29%), Positives = 66/129 (51%)
Query: 150 LPNNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQ 209
L NN ++ + +L +++LS+N++ ++E+ +F+G SS+N L L+ N+L
Sbjct: 540 LNNNEITTIEAMGAFKTLTHLKKINLSNNKISEIEDGAFEGASSVNELHLTANQLDLAHS 599
Query: 210 DCLAPLVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNLLAGPLGPSTVPRLSSLKV 269
L LR+L L+ NR++ + GL +V L L N L + P L SL
Sbjct: 600 GMFRGLEGLRMLMLRNNRISCIHNNSFTGLHNVRLLSLYDNTLT-TIAPGAFDTLQSLST 658
Query: 270 LSIAHNQFS 278
L++ N F+
Sbjct: 659 LNLLANPFN 667
Score = 134 (52.2 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 37/128 (28%), Positives = 57/128 (44%)
Query: 241 SVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQ 300
S T+ L++N + L+ LK +++++N+ S + GA G + L NQ
Sbjct: 534 STTEPRLNNNEITTIEAMGAFKTLTHLKKINLSNNKISEIEDGAFEGASSVNELHLTANQ 593
Query: 301 IDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPL 360
+D+ FR L L L L +NRI + S L N+ L L N L + L
Sbjct: 594 LDLAHSGMFRGLEGLRMLMLRNNRISCIHNNSFTGLHNVRLLSLYDNTLTTIAPGAFDTL 653
Query: 361 KSLQELRL 368
+SL L L
Sbjct: 654 QSLSTLNL 661
Score = 126 (49.4 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 37/131 (28%), Positives = 61/131 (46%)
Query: 241 SVTDLDLSHNLLAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQ 300
S+T++ L N + + P L+ + +++NQ S + A GL L SL + N+
Sbjct: 303 SMTEIRLEQNSIKS-IPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 361
Query: 301 IDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPL 360
I L F L L L L N+I + + L NL+ L L N ++ L + + L
Sbjct: 362 ITDLPRGVFDGLHALQLLLLNANKIHCLRANTFQDLQNLSLLSLYDNKIQTLAKGTFSSL 421
Query: 361 KSLQELRLDDN 371
+++Q L L N
Sbjct: 422 RAIQTLHLAQN 432
Score = 120 (47.3 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 67/305 (21%), Positives = 126/305 (41%)
Query: 100 LDCTLSNVTVLPGKFLEGVT-LHGLVISSGELKNISDGAFIGLSSPLQALGLPNNLLSVV 158
L+ +N+T + G+ L L + ++ + GAF + L+ L L N L +
Sbjct: 59 LELNGNNLTRINRNDFTGLKYLRVLQLMENQIVTVERGAFDEMRE-LERLRLNRNQLHQL 117
Query: 159 PTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLMTLSQDCLAPLVTL 218
P A L RLDLS N + + +F+G + + L L N + + + L
Sbjct: 118 PELLFQKNAA-LSRLDLSENFIQAIPRKAFRGATDIKNLQLDKNHISCIEDGAFRAMRGL 176
Query: 219 RVLRLQGNRLTVSVVAALQGLRSVTDLDL-SHNLLAGPLGPSTVPRLSSLKVLSIAHNQF 277
VL L N ++ V++ + + L S+NL+ + L + + Q
Sbjct: 177 EVLTLNNNNISSIPVSSFNHMPKLRTFRLHSNNLVCDCVLSWLSQWLRERPNIGL-FTQC 235
Query: 278 SSVR--RGA-LAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAV--SGAS 332
SS RG +A + K SC + + + + +N IV G +
Sbjct: 236 SSPAPLRGLNVAEVQK-HEFSCSGQSDSAVGQSCSLSSGSCPAVCSCNNNIVDCRGKGPT 294
Query: 333 LAHLS---NLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS-MEPECIYVGFNTMD 388
L S ++T + L N ++++ +P K L+ + L +N IS + P+ + G +++
Sbjct: 295 LIPSSLPDSMTEIRLEQNSIKSIPPGAFSPYKKLRRIDLSNNQISELAPDA-FQGLRSLN 353
Query: 389 LELIY 393
++Y
Sbjct: 354 SLVLY 358
Score = 120 (47.3 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 67/323 (20%), Positives = 137/323 (42%)
Query: 93 PDERVSLLDCTLSNVTVLPGKFLEGV-TLHGLVISSGELKNISDGAFIGLSSPLQALGLP 151
P +++ +D + + ++ L +G+ +L+ LV+ ++ ++ G F GL + LQ L L
Sbjct: 324 PYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITDLPRGVFDGLHA-LQLLLLN 382
Query: 152 NNLLSVVPTSALAPLAPNLDRLDLSHNQLYKLENTSFKGLSSLNFLDLSYNKLM------ 205
N + + + L NL L L N++ L +F L ++ L L+ N +
Sbjct: 383 ANKIHCLRANTFQDLQ-NLSLLSLYDNKIQTLAKGTFSSLRAIQTLHLAQNPFICDCNLK 441
Query: 206 ------------TLSQDCLAP--LVTLRVLRLQGNRLTVSVVAALQGLRSVTDLDLSHNL 251
T C +P L R+ +++ + S + D L+++
Sbjct: 442 WLADYLRSNPIETSGARCTSPRRLANKRIGQIKSKKFRCSAKEQY-AIPGTEDSRLNNDC 500
Query: 252 LAGPLGPSTVPRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDH-SFR 310
P+ P+ R S V+ ++ + + A T ++N+I +E +F+
Sbjct: 501 NNDPVCPAKC-RCES-NVVDCSNLRLDRIPEHVPAST---TEPRLNNNEITTIEAMGAFK 555
Query: 311 ALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDD 370
L+ L ++L++N+I + + S++ L L+ N L + L+ L+ L L +
Sbjct: 556 TLTHLKKINLSNNKISEIEDGAFEGASSVNELHLTANQLDLAHSGMFRGLEGLRMLMLRN 615
Query: 371 NDISMEPECIYVGFNTMDLELIY 393
N IS + G + + L +Y
Sbjct: 616 NRISCIHNNSFTGLHNVRLLSLY 638
Score = 96 (38.9 bits), Expect = 7.8e-13, Sum P(3) = 7.8e-13
Identities = 29/118 (24%), Positives = 57/118 (48%)
Query: 258 PSTVPRLSSLKVLSIAHNQFSSVRR-GALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLS 316
P VP ++ L+ +N+ +++ GA L L ++ +N+I +ED +F S+++
Sbjct: 528 PEHVPASTTEPRLN--NNEITTIEAMGAFKTLTHLKKINLSNNKISEIEDGAFEGASSVN 585
Query: 317 HLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 374
L L N++ L L L L +N + + + T L +++ L L DN ++
Sbjct: 586 ELHLTANQLDLAHSGMFRGLEGLRMLMLRNNRISCIHNNSFTGLHNVRLLSLYDNTLT 643
Score = 80 (33.2 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 22/94 (23%), Positives = 40/94 (42%)
Query: 601 CRTPRNSTIHHHACFIPVAQQEDDINRNNSDSRYVKLQATTILLSSLKVLSIAHNQFSSV 660
C R I H +P + E +N N + ++ L+ LK +++++N+ S +
Sbjct: 519 CSNLRLDRIPEH---VPASTTEPRLNNNEITT--IEAMGAFKTLTHLKKINLSNNKISEI 573
Query: 661 RRGALAGLDKLTSLSCHHNQIDVLEDHSFSNVIG 694
GA G + L NQ+D+ F + G
Sbjct: 574 EDGAFEGASSVNELHLTANQLDLAHSGMFRGLEG 607
Score = 68 (29.0 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 24/94 (25%), Positives = 43/94 (45%)
Query: 296 CHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQD 355
C + + L + R ++ L +LD N++ V L+ +L +DLS+N + +LT
Sbjct: 740 CSNKHLQALPKGTPRNITEL-YLD--GNQLSTVP-KELSSFKSLQLVDLSNNRISSLTNS 795
Query: 356 LITPLKSLQELRLDDNDISMEPECIYVGFNTMDL 389
T + L L L N + P + G ++ L
Sbjct: 796 SFTNMSQLTTLILSYNALRCIPTLAFSGLRSLRL 829
Score = 67 (28.6 bits), Expect = 7.8e-13, Sum P(3) = 7.8e-13
Identities = 20/63 (31%), Positives = 31/63 (49%)
Query: 630 SDSRYVKLQATTIL-LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHS 688
S++R L ++ +S L L +++N + A +GL L LS H N I L D
Sbjct: 785 SNNRISSLTNSSFTNMSQLTTLILSYNALRCIPTLAFSGLRSLRLLSLHGNDISELPDGI 844
Query: 689 FSN 691
FS+
Sbjct: 845 FSD 847
Score = 63 (27.2 bits), Expect = 6.4e-10, Sum P(2) = 6.4e-10
Identities = 14/48 (29%), Positives = 24/48 (50%)
Query: 645 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
SS+ L + NQ G GL+ L L +N+I + ++SF+ +
Sbjct: 582 SSVNELHLTANQLDLAHSGMFRGLEGLRMLMLRNNRISCIHNNSFTGL 629
Score = 59 (25.8 bits), Expect = 5.1e-12, Sum P(3) = 5.1e-12
Identities = 11/47 (23%), Positives = 28/47 (59%)
Query: 646 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
SL+++ +++N+ SS+ + + +LT+L +N + + +FS +
Sbjct: 778 SLQLVDLSNNRISSLTNSSFTNMSQLTTLILSYNALRCIPTLAFSGL 824
Score = 57 (25.1 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L +L++L + N+ +R L L+ LS + N+I L +FS++
Sbjct: 373 LHALQLLLLNANKIHCLRANTFQDLQNLSLLSLYDNKIQTLAKGTFSSL 421
Score = 55 (24.4 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
L SL L + N+ + + RG GL L L + N+I L ++F ++
Sbjct: 349 LRSLNSLVLYGNKITDLPRGVFDGLHALQLLLLNANKIHCLRANTFQDL 397
Score = 47 (21.6 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 14/58 (24%), Positives = 27/58 (46%)
Query: 644 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI--------DVLEDHSFSNVI 693
L L++L + +N+ S + + GL + LS + N + D L+ S N++
Sbjct: 605 LEGLRMLMLRNNRISCIHNNSFTGLHNVRLLSLYDNTLTTIAPGAFDTLQSLSTLNLL 662
Score = 45 (20.9 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 655 NQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFSNV 692
NQ S+V + L+ L + +N+I L + SF+N+
Sbjct: 764 NQLSTVPK-ELSSFKSLQLVDLSNNRISSLTNSSFTNM 800
WARNING: HSPs involving 892 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.135 0.396 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 694 616 0.00088 120 3 11 22 0.37 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1142
No. of states in DFA: 616 (65 KB)
Total size of DFA: 309 KB (2157 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 51.32u 0.15s 51.47t Elapsed: 00:00:03
Total cpu time: 51.52u 0.16s 51.68t Elapsed: 00:00:03
Start: Thu Aug 15 12:06:23 2013 End: Thu Aug 15 12:06:26 2013
WARNINGS ISSUED: 2