Your job contains 1 sequence.
>psy8880
MSIWCTVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALST
LSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS
MVTPDVIGDNVTITTLTLSGE
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy8880
(141 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0034540 - symbol:Lrt "Leucine-rich tendon-specific... 321 7.9e-28 1
ZFIN|ZDB-GENE-050506-80 - symbol:lrrtm1 "leucine rich rep... 188 7.1e-14 1
RGD|70551 - symbol:Lrrc15 "leucine rich repeat containing... 185 1.8e-13 1
UNIPROTKB|F1N7G4 - symbol:ISLR2 "Uncharacterized protein"... 185 2.7e-13 1
UNIPROTKB|A1A4H9 - symbol:LRRTM1 "Leucine-rich repeat tra... 182 3.1e-13 1
RGD|1585921 - symbol:LRRTM1 "leucine rich repeat transmem... 182 3.2e-13 1
UNIPROTKB|E2QW21 - symbol:LRRTM1 "Uncharacterized protein... 181 4.0e-13 1
UNIPROTKB|I3L5J3 - symbol:LRRTM1 "Uncharacterized protein... 181 4.0e-13 1
UNIPROTKB|Q86UE6 - symbol:LRRTM1 "Leucine-rich repeat tra... 181 4.0e-13 1
MGI|MGI:2389173 - symbol:Lrrtm1 "leucine rich repeat tran... 179 6.6e-13 1
UNIPROTKB|Q6UXK2 - symbol:ISLR2 "Immunoglobulin superfami... 181 7.3e-13 1
UNIPROTKB|F1NHS1 - symbol:F1NHS1 "Uncharacterized protein... 123 9.2e-13 2
MGI|MGI:1921738 - symbol:Lrrc15 "leucine rich repeat cont... 178 1.0e-12 1
MGI|MGI:2389180 - symbol:Lrrtm4 "leucine rich repeat tran... 175 2.2e-12 1
RGD|1560707 - symbol:Lrrtm4 "leucine rich repeat transmem... 175 2.2e-12 1
UNIPROTKB|C9JEE2 - symbol:LRRTM1 "Leucine-rich repeat tra... 164 3.1e-12 1
UNIPROTKB|C9JPM9 - symbol:LRRTM1 "Leucine-rich repeat tra... 164 3.1e-12 1
UNIPROTKB|F1NVW6 - symbol:F1NVW6 "Uncharacterized protein... 163 3.9e-12 1
UNIPROTKB|P35858 - symbol:IGFALS "Insulin-like growth fac... 172 4.9e-12 1
UNIPROTKB|F1NI07 - symbol:IGFALS "Uncharacterized protein... 171 6.2e-12 1
ZFIN|ZDB-GENE-040310-1 - symbol:rtn4r "reticulon 4 recept... 169 6.8e-12 1
UNIPROTKB|J9NZ68 - symbol:SLIT2 "Uncharacterized protein"... 118 7.8e-12 2
ZFIN|ZDB-GENE-080327-8 - symbol:lrrtm2 "leucine rich repe... 169 8.5e-12 1
MGI|MGI:2444277 - symbol:Islr2 "immunoglobulin superfamil... 171 8.6e-12 1
ZFIN|ZDB-GENE-060503-496 - symbol:lrrc24 "leucine rich re... 169 9.9e-12 1
UNIPROTKB|F1P8A1 - symbol:SLIT2 "Uncharacterized protein"... 134 1.0e-11 2
UNIPROTKB|Q96JA1 - symbol:LRIG1 "Leucine-rich repeats and... 164 1.1e-11 2
MGI|MGI:2389174 - symbol:Lrrtm2 "leucine rich repeat tran... 167 1.3e-11 1
RGD|1593785 - symbol:Lrrtm2 "leucine rich repeat transmem... 167 1.3e-11 1
UNIPROTKB|A6H701 - symbol:LRRTM2 "Uncharacterized protein... 166 1.6e-11 1
UNIPROTKB|O43300 - symbol:LRRTM2 "Leucine-rich repeat tra... 166 1.6e-11 1
UNIPROTKB|F1NWG8 - symbol:F1NWG8 "Uncharacterized protein... 166 1.7e-11 1
UNIPROTKB|O75325 - symbol:LRRN2 "Leucine-rich repeat neur... 168 1.7e-11 1
MGI|MGI:107935 - symbol:Lrig1 "leucine-rich repeats and i... 162 1.8e-11 2
FB|FBgn0036494 - symbol:Toll-6 "Toll-6" species:7227 "Dro... 170 2.7e-11 1
UNIPROTKB|E1BX56 - symbol:LRRTM1 "Uncharacterized protein... 164 2.8e-11 1
UNIPROTKB|Q86VH4 - symbol:LRRTM4 "Leucine-rich repeat tra... 164 3.4e-11 1
UNIPROTKB|Q27972 - symbol:CHAD "Chondroadherin" species:9... 159 4.5e-11 1
UNIPROTKB|P02750 - symbol:LRG1 "Leucine-rich alpha-2-glyc... 158 5.3e-11 1
UNIPROTKB|G3MXX5 - symbol:RTN4R "Uncharacterized protein"... 160 6.3e-11 1
ZFIN|ZDB-GENE-010306-4 - symbol:slit3 "slit (Drosophila) ... 166 7.3e-11 1
UNIPROTKB|C9JYU3 - symbol:LRRC32 "Leucine-rich repeat-con... 151 7.4e-11 1
FB|FBgn0259677 - symbol:CG42346 species:7227 "Drosophila ... 166 8.0e-11 1
MGI|MGI:2136810 - symbol:Lrfn1 "leucine rich repeat and f... 153 8.1e-11 2
RGD|1304707 - symbol:Lrfn1 "leucine rich repeat and fibro... 153 8.1e-11 2
UNIPROTKB|Q8TF66 - symbol:LRRC15 "Leucine-rich repeat-con... 160 8.9e-11 1
UNIPROTKB|O15335 - symbol:CHAD "Chondroadherin" species:9... 156 9.6e-11 1
UNIPROTKB|F1NG27 - symbol:TLR3 "Uncharacterized protein" ... 162 1.0e-10 1
UNIPROTKB|Q9P244 - symbol:LRFN1 "Leucine-rich repeat and ... 152 1.1e-10 2
UNIPROTKB|A4IFA6 - symbol:ISLR "Immunoglobulin superfamil... 157 1.1e-10 1
MGI|MGI:1349645 - symbol:Islr "immunoglobulin superfamily... 157 1.1e-10 1
MGI|MGI:2444651 - symbol:Lingo4 "leucine rich repeat and ... 159 1.2e-10 1
MGI|MGI:107973 - symbol:Igfals "insulin-like growth facto... 159 1.2e-10 1
FB|FBgn0005775 - symbol:Con "Connectin" species:7227 "Dro... 159 1.5e-10 1
ZFIN|ZDB-GENE-080327-14 - symbol:lrrtm4l2 "leucine rich r... 156 1.5e-10 1
UNIPROTKB|Q50LG9 - symbol:LRRC24 "Leucine-rich repeat-con... 157 1.5e-10 1
FB|FBgn0243486 - symbol:rdo "reduced ocelli" species:7227... 159 1.6e-10 1
FB|FBgn0033250 - symbol:CG14762 species:7227 "Drosophila ... 156 1.7e-10 1
UNIPROTKB|P22792 - symbol:CPN2 "Carboxypeptidase N subuni... 157 1.7e-10 1
RGD|620810 - symbol:Rtn4r "reticulon 4 receptor" species:... 156 1.7e-10 1
MGI|MGI:3605040 - symbol:Lrrc24 "leucine rich repeat cont... 156 2.0e-10 1
MGI|MGI:2136886 - symbol:Rtn4r "reticulon 4 receptor" spe... 155 2.2e-10 1
UNIPROTKB|F1RHM5 - symbol:RTN4R "Uncharacterized protein"... 155 2.2e-10 1
MGI|MGI:2685352 - symbol:Podnl1 "podocan-like 1" species:... 156 2.3e-10 1
MGI|MGI:3045213 - symbol:Tlr13 "toll-like receptor 13" sp... 159 2.4e-10 1
MGI|MGI:1914394 - symbol:Lrrc40 "leucine rich repeat cont... 156 2.5e-10 1
UNIPROTKB|Q7Z2Q7 - symbol:LRRC70 "Leucine-rich repeat-con... 156 2.7e-10 1
UNIPROTKB|A5H649 - symbol:TLR3 "Toll-like receptor 3" spe... 158 2.8e-10 1
UNIPROTKB|O14498 - symbol:ISLR "Immunoglobulin superfamil... 153 3.0e-10 1
UNIPROTKB|F1LRE2 - symbol:Igfals "Insulin-like growth fac... 155 3.3e-10 1
UNIPROTKB|Q1KS52 - symbol:ALS "Acid-labile subunit" speci... 155 3.3e-10 1
ZFIN|ZDB-GENE-080327-15 - symbol:lrrtm4l1 "leucine rich r... 154 3.8e-10 1
UNIPROTKB|H3BNZ6 - symbol:ISLR2 "Immunoglobulin superfami... 144 4.1e-10 1
UNIPROTKB|F1NRN7 - symbol:SHOC2 "Leucine-rich repeat prot... 153 4.3e-10 1
WB|WBGene00006366 - symbol:sym-1 species:6239 "Caenorhabd... 154 5.0e-10 1
UNIPROTKB|E1BU15 - symbol:SHOC2 "Leucine-rich repeat prot... 153 5.1e-10 1
DICTYBASE|DDB_G0278509 - symbol:DDB_G0278509 "MLK family ... 157 5.3e-10 1
FB|FBgn0034083 - symbol:lbk "lambik" species:7227 "Drosop... 157 5.3e-10 1
UNIPROTKB|Q5F4C4 - symbol:SHOC2 "Leucine-rich repeat prot... 152 5.6e-10 1
UNIPROTKB|Q5TJ59 - symbol:TLR3 "Toll-like receptor 3" spe... 155 5.8e-10 1
FB|FBgn0029114 - symbol:Tollo "Tollo" species:7227 "Droso... 157 5.8e-10 1
FB|FBgn0038504 - symbol:Sur-8 "Sur-8" species:7227 "Droso... 153 5.9e-10 1
UNIPROTKB|Q9BZR6 - symbol:RTN4R "Reticulon-4 receptor" sp... 151 5.9e-10 1
FB|FBgn0004364 - symbol:18w "18 wheeler" species:7227 "Dr... 157 6.0e-10 1
RGD|68429 - symbol:Igfals "insulin-like growth factor bin... 152 6.8e-10 1
FB|FBgn0261269 - symbol:conv "convoluted" species:7227 "D... 155 7.3e-10 1
RGD|2724 - symbol:Gp5 "glycoprotein V (platelet)" species... 151 8.0e-10 1
TAIR|locus:2094603 - symbol:RLP37 "receptor like protein ... 153 8.5e-10 1
MGI|MGI:1096866 - symbol:Chad "chondroadherin" species:10... 147 9.3e-10 1
RGD|1359464 - symbol:Lrg1 "leucine-rich alpha-2-glycoprot... 146 1.0e-09 1
UNIPROTKB|Q14392 - symbol:LRRC32 "Leucine-rich repeat-con... 151 1.0e-09 1
WB|WBGene00010621 - symbol:egg-6 species:6239 "Caenorhabd... 153 1.0e-09 1
MGI|MGI:3609246 - symbol:Lingo3 "leucine rich repeat and ... 150 1.1e-09 1
ZFIN|ZDB-GENE-030722-3 - symbol:slit1a "slit homolog 1a (... 137 1.2e-09 2
FB|FBgn0085397 - symbol:Fili "Fish-lips" species:7227 "Dr... 151 1.2e-09 1
FB|FBgn0028888 - symbol:CG4168 species:7227 "Drosophila m... 154 1.3e-09 1
MGI|MGI:1916925 - symbol:Pxdn "peroxidasin homolog (Droso... 154 1.3e-09 1
MGI|MGI:1919006 - symbol:Cpn2 "carboxypeptidase N, polype... 148 1.6e-09 1
UNIPROTKB|Q86VH5 - symbol:LRRTM3 "Leucine-rich repeat tra... 148 1.7e-09 1
WB|WBGene00006593 - symbol:tol-1 species:6239 "Caenorhabd... 152 1.8e-09 1
WARNING: Descriptions of 930 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0034540 [details] [associations]
symbol:Lrt "Leucine-rich tendon-specific protein"
species:7227 "Drosophila melanogaster" [GO:0016021 "integral to
membrane" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:2001282 "negative regulation of muscle cell chemotaxis toward
tendon cell" evidence=IMP] [GO:0005927 "muscle tendon junction"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0043234 "protein complex" evidence=IPI] [GO:2001283 "Roundabout
signaling pathway involved in muscle cell chemotaxis toward tendon
cell" evidence=IGI] InterPro:IPR001611 PROSITE:PS51450
EMBL:AE013599 GO:GO:0016021 GO:GO:0005886 GO:GO:0043234
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005927 GeneTree:ENSGT00690000101816 RefSeq:NP_611506.2
UniGene:Dm.22099 ProteinModelPortal:A1ZBX8 SMR:A1ZBX8
EnsemblMetazoa:FBtr0302284 GeneID:37342 KEGG:dme:Dmel_CG11136
UCSC:CG11136-RA CTD:37342 FlyBase:FBgn0034540 eggNOG:NOG299525
InParanoid:A1ZBX8 OMA:PIHCESK OrthoDB:EOG48KPT1 GenomeRNAi:37342
NextBio:803193 Bgee:A1ZBX8 GO:GO:2001282 GO:GO:2001283
Uniprot:A1ZBX8
Length = 808
Score = 321 (118.1 bits), Expect = 7.9e-28, P = 7.9e-28
Identities = 67/117 (57%), Positives = 84/117 (71%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T+ + +L+ L++ N S++ ALA +L SLS HNQIDVL+DH+F L L LD
Sbjct: 319 TLPGMRNLESLNLNRNLIKSIQNKALANFSRLVSLSLRHNQIDVLQDHAFFGLGALDSLD 378
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
L++N IVA+S ASL HLS LT LDL+HNFLRALT DLI PL SL+ELRL NDIS+V
Sbjct: 379 LSYNGIVAISSASLQHLSRLTVLDLTHNFLRALTSDLIAPLPSLRELRLAGNDISIV 435
Score = 136 (52.9 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 35/110 (31%), Positives = 59/110 (53%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
S L LS+ HNQ ++ A GL L SL +N I + S + LS L+ LDL HN
Sbjct: 348 SRLVSLSLRHNQIDVLQDHAFFGLGALDSLDLSYNGIVAISSASLQHLSRLTVLDLTHNF 407
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
+ A++ +A L +L L L+ N + + ++ + + L+ L++ +N +S
Sbjct: 408 LRALTSDLIAPLPSLRELRLAGNDISIVARNAMDGARELESLQMQENPLS 457
Score = 132 (51.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 41/142 (28%), Positives = 70/142 (49%)
Query: 1 MSI-WCTVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALS 59
MS+ W + LS+L+ L +A+N+ ++ GL L L +NQI + +F L
Sbjct: 214 MSVPWNALSTLSALERLDLANNKIKALGTADFVGLTSLVYLELSNNQISSISQRTFVNLR 273
Query: 60 TLSHLDLAHNRI--VAVSGASLAHLSNLTTLDLSHNFLRA-LTQDLITPLKSLQELRLDD 116
L L L NR+ A S SL+ +L LDL N L L++ + +++L+ L L+
Sbjct: 274 KLEVLKLGGNRLGDYAQSLRSLSQCLSLRQLDLQANNLNGPLSEQTLPGMRNLESLNLNR 333
Query: 117 NDISMVTPDVIGDNVTITTLTL 138
N I + + + + +L+L
Sbjct: 334 NLIKSIQNKALANFSRLVSLSL 355
Score = 125 (49.1 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 41/139 (29%), Positives = 69/139 (49%)
Query: 6 TVRRLS---SLKVLSI-AHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTL 61
++R LS SL+ L + A+N + L G+ L SL+ + N I +++ + S L
Sbjct: 291 SLRSLSQCLSLRQLDLQANNLNGPLSEQTLPGMRNLESLNLNRNLIKSIQNKALANFSRL 350
Query: 62 SHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISM 121
L L HN+I + + L L +LDLS+N + A++ + L L L L N +
Sbjct: 351 VSLSLRHNQIDVLQDHAFFGLGALDSLDLSYNGIVAISSASLQHLSRLTVLDLTHNFLRA 410
Query: 122 VTPDVIGDNVTITTLTLSG 140
+T D+I ++ L L+G
Sbjct: 411 LTSDLIAPLPSLRELRLAG 429
Score = 114 (45.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 34/110 (30%), Positives = 57/110 (51%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
L+ L + N SV AL+ L L L +N+I L F L++L +L+L++N+I
Sbjct: 203 LQALGLPGNALMSVPWNALSTLSALERLDLANNKIKALGTADFVGLTSLVYLELSNNQIS 262
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDL--ITPLKSLQELRLDDNDIS 120
++S + +L L L L N L Q L ++ SL++L L N+++
Sbjct: 263 SISQRTFVNLRKLEVLKLGGNRLGDYAQSLRSLSQCLSLRQLDLQANNLN 312
>ZFIN|ZDB-GENE-050506-80 [details] [associations]
symbol:lrrtm1 "leucine rich repeat transmembrane
neuronal 1" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IDA] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-050506-80 InterPro:IPR003591 SMART:SM00369
GO:GO:0042802 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104056 EMBL:CU076051 CTD:347730
HOGENOM:HOG000290681 HOVERGEN:HBG052362 KO:K16665 OMA:EPDLFHG
IPI:IPI00493041 RefSeq:XP_003197743.1 UniGene:Dr.12811
ProteinModelPortal:B8JKM0 IntAct:B8JKM0 Ensembl:ENSDART00000133917
GeneID:570385 KEGG:dre:570385 NextBio:20890105 ArrayExpress:B8JKM0
Bgee:B8JKM0 Uniprot:B8JKM0
Length = 524
Score = 188 (71.2 bits), Expect = 7.1e-14, P = 7.1e-14
Identities = 44/122 (36%), Positives = 65/122 (53%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
+ LSS LS+ N S +R G GL +LT L HN I+++E+ +F L + LDL+
Sbjct: 64 QNLSSAIGLSLRENNISELREGNFVGLSQLTWLYLDHNNIEIVEESAFERLRRIKELDLS 123
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI 127
NRI ++ + L NL LDLS+N L++L DL L+ L L L N + + +
Sbjct: 124 TNRIESLPNGTFRPLPNLRILDLSYNRLQSLEPDLFHGLRKLTNLHLRYNALKFIPVRIF 183
Query: 128 GD 129
D
Sbjct: 184 QD 185
Score = 137 (53.3 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 35/117 (29%), Positives = 62/117 (52%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T R L +L++L +++N+ S+ GL KLT+L +N + + F+ ++ LD
Sbjct: 134 TFRPLPNLRILDLSYNRLQSLEPDLFHGLRKLTNLHLRYNALKFIPVRIFQDCRSMQFLD 193
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
L +N++ +++ S A L LT L L HN L + L SL+ L + +N ++V
Sbjct: 194 LGYNQLQSLARNSFAGLFKLTELHLEHNELVKVNLAHFPRLISLRTLYMRNNKATIV 250
Score = 137 (53.3 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 34/129 (26%), Positives = 63/129 (48%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
S++ L + +NQ S+ R + AGL KLT L HN++ + F L +L L + +N+
Sbjct: 188 SMQFLDLGYNQLQSLARNSFAGLFKLTELHLEHNELVKVNLAHFPRLISLRTLYMRNNKA 247
Query: 72 VAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNV 131
V L +D S+N + + + + L L LD N ++ + ++
Sbjct: 248 TIVVNTLEWTWDYLEKIDFSNNEIEYIEPHVFESVPKLNTLMLDSNKLTYIDQRILDSWT 307
Query: 132 TITTLTLSG 140
+++++TLSG
Sbjct: 308 SLSSITLSG 316
Score = 127 (49.8 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 39/130 (30%), Positives = 61/130 (46%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
LS L L + HN V A L ++ L N+I+ L + +FR L L LDL++N
Sbjct: 90 LSQLTWLYLDHNNIEIVEESAFERLRRIKELDLSTNRIESLPNGTFRPLPNLRILDLSYN 149
Query: 70 RIVAVSGASLAH-LSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
R+ ++ L H L LT L L +N L+ + + +S+Q L L N + + +
Sbjct: 150 RLQSLE-PDLFHGLRKLTNLHLRYNALKFIPVRIFQDCRSMQFLDLGYNQLQSLARNSFA 208
Query: 129 DNVTITTLTL 138
+T L L
Sbjct: 209 GLFKLTELHL 218
Score = 123 (48.4 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 32/114 (28%), Positives = 55/114 (48%)
Query: 9 RLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 68
RL +K L ++ N+ S+ G L L L +N++ LE F L L++L L +
Sbjct: 113 RLRRIKELDLSTNRIESLPNGTFRPLPNLRILDLSYNRLQSLEPDLFHGLRKLTNLHLRY 172
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
N + + ++ LDL +N L++L ++ L L EL L+ N++ V
Sbjct: 173 NALKFIPVRIFQDCRSMQFLDLGYNQLQSLARNSFAGLFKLTELHLEHNELVKV 226
Score = 119 (46.9 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 34/105 (32%), Positives = 48/105 (45%)
Query: 34 LDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHN 93
L LS N I L + +F LS L+ L L HN I V ++ L + LDLS N
Sbjct: 66 LSSAIGLSLRENNISELREGNFVGLSQLTWLYLDHNNIEIVEESAFERLRRIKELDLSTN 125
Query: 94 FLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTLTL 138
+ +L PL +L+ L L N + + PD+ +T L L
Sbjct: 126 RIESLPNGTFRPLPNLRILDLSYNRLQSLEPDLFHGLRKLTNLHL 170
Score = 104 (41.7 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 33/129 (25%), Positives = 54/129 (41%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L L + +N + + L +NQ+ L +SF L L+ L L HN
Sbjct: 162 LRKLTNLHLRYNALKFIPVRIFQDCRSMQFLDLGYNQLQSLARNSFAGLFKLTELHLEHN 221
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+V V+ A L +L TL + +N + L L+++ +N+I + P V
Sbjct: 222 ELVKVNLAHFPRLISLRTLYMRNNKATIVVNTLEWTWDYLEKIDFSNNEIEYIEPHVFES 281
Query: 130 NVTITTLTL 138
+ TL L
Sbjct: 282 VPKLNTLML 290
>RGD|70551 [details] [associations]
symbol:Lrrc15 "leucine rich repeat containing 15" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IDA]
[GO:0007154 "cell communication" evidence=TAS] [GO:0016021 "integral
to membrane" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 RGD:70551 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005622
InterPro:IPR000372 SMART:SM00013 GO:GO:0007154 CTD:131578
HOVERGEN:HBG052343 EMBL:AB071036 IPI:IPI00201949 RefSeq:NP_659551.1
UniGene:Rn.213072 ProteinModelPortal:Q8R5M3 PRIDE:Q8R5M3
GeneID:246296 KEGG:rno:246296 UCSC:RGD:70551 NextBio:623686
Genevestigator:Q8R5M3 Uniprot:Q8R5M3
Length = 578
Score = 185 (70.2 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 42/112 (37%), Positives = 65/112 (58%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T L+ L+VL ++HNQ + + GA GL L LS H N + L+ + FR+L+ L ++
Sbjct: 312 TFSHLNQLQVLILSHNQLTYISPGAFNGLTNLRELSLHTNALQDLDSNVFRSLANLQNIS 371
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
L NR+ + G+ A+++ LTT+ L +N L L + L +L ELRL DN
Sbjct: 372 LQSNRLRQLPGSIFANVNGLTTIQLQNNNLENLPLGIFDHLVNLCELRLYDN 423
Score = 145 (56.1 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 36/130 (27%), Positives = 62/130 (47%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
+++L+ L +++NQ ++ + L L H N ++ + + +F L L+ L+L N
Sbjct: 124 VNNLESLLLSNNQLVQIQPAQFSQFSNLRELQLHGNNLESIPEEAFDHLVGLTKLNLGRN 183
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+S HL NL L L N L + L +LQEL L +N I ++P + +
Sbjct: 184 SFTHLSPRLFQHLGNLQVLRLHENRLSDIPMGTFDALGNLQELALQENQIGTLSPGLFHN 243
Query: 130 NVTITTLTLS 139
N + L LS
Sbjct: 244 NRNLQRLYLS 253
Score = 144 (55.7 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 41/125 (32%), Positives = 62/125 (49%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
R L SL+ LS+A+N+ + ++ L SL +NQ+ ++ F S L L L
Sbjct: 98 RNLGSLRYLSLANNKLRMLPIRVFQDVNNLESLLLSNNQLVQIQPAQFSQFSNLRELQLH 157
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN---DISMVTP 124
N + ++ + HL LT L+L N L+ L L +LQ LRL +N DI M T
Sbjct: 158 GNNLESIPEEAFDHLVGLTKLNLGRNSFTHLSPRLFQHLGNLQVLRLHENRLSDIPMGTF 217
Query: 125 DVIGD 129
D +G+
Sbjct: 218 DALGN 222
Score = 136 (52.9 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 39/131 (29%), Positives = 64/131 (48%)
Query: 9 RLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 68
+L L L++ N + G + L L ++N I L D++F L+ L L L+H
Sbjct: 267 QLPQLNKLTLFGNSLRELSPGVFGPMPNLRELWLYNNHITSLADNTFSHLNQLQVLILSH 326
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
N++ +S + L+NL L L N L+ L ++ L +LQ + L N + + P I
Sbjct: 327 NQLTYISPGAFNGLTNLRELSLHTNALQDLDSNVFRSLANLQNISLQSNRLRQL-PGSIF 385
Query: 129 DNVT-ITTLTL 138
NV +TT+ L
Sbjct: 386 ANVNGLTTIQL 396
Score = 134 (52.2 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 33/115 (28%), Positives = 60/115 (52%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
+S+L L + N+ S++ GA L L LS +N++ +L F+ ++ L L L++N
Sbjct: 76 ISALIALKMEKNELSTIMPGAFRNLGSLRYLSLANNKLRMLPIRVFQDVNNLESLLLSNN 135
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTP 124
++V + A + SNL L L N L ++ ++ L L +L L N + ++P
Sbjct: 136 QLVQIQPAQFSQFSNLRELQLHGNNLESIPEEAFDHLVGLTKLNLGRNSFTHLSP 190
Score = 128 (50.1 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 38/132 (28%), Positives = 58/132 (43%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
+ L +L+VL + N+ S + G L L L+ NQI L F L L L+
Sbjct: 194 QHLGNLQVLRLHENRLSDIPMGTFDALGNLQELALQENQIGTLSPGLFHNNRNLQRLYLS 253
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI 127
+N I + L L L L N LR L+ + P+ +L+EL L +N I+ + +
Sbjct: 254 NNHISQLPPGIFMQLPQLNKLTLFGNSLRELSPGVFGPMPNLRELWLYNNHITSLADNTF 313
Query: 128 GDNVTITTLTLS 139
+ L LS
Sbjct: 314 SHLNQLQVLILS 325
Score = 124 (48.7 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 39/132 (29%), Positives = 57/132 (43%)
Query: 9 RLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 68
+ S+L+ L + N S+ A L LT L+ N L F+ L L L L
Sbjct: 147 QFSNLRELQLHGNNLESIPEEAFDHLVGLTKLNLGRNSFTHLSPRLFQHLGNLQVLRLHE 206
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
NR+ + + L NL L L N + L+ L ++LQ L L +N IS + P +
Sbjct: 207 NRLSDIPMGTFDALGNLQELALQENQIGTLSPGLFHNNRNLQRLYLSNNHISQLPPGIFM 266
Query: 129 DNVTITTLTLSG 140
+ LTL G
Sbjct: 267 QLPQLNKLTLFG 278
Score = 116 (45.9 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 33/127 (25%), Positives = 60/127 (47%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
+L+ L +++N S + G L +L L+ N + L F + L L L +N I
Sbjct: 246 NLQRLYLSNNHISQLPPGIFMQLPQLNKLTLFGNSLRELSPGVFGPMPNLRELWLYNNHI 305
Query: 72 VAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNV 131
+++ + +HL+ L L LSHN L ++ L +L+EL L N + + +V
Sbjct: 306 TSLADNTFSHLNQLQVLILSHNQLTYISPGAFNGLTNLRELSLHTNALQDLDSNVFRSLA 365
Query: 132 TITTLTL 138
+ ++L
Sbjct: 366 NLQNISL 372
Score = 115 (45.5 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 36/129 (27%), Positives = 55/129 (42%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L L++ N F+ + L L L H N++ + +F AL L L L N
Sbjct: 172 LVGLTKLNLGRNSFTHLSPRLFQHLGNLQVLRLHENRLSDIPMGTFDALGNLQELALQEN 231
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+I +S + NL L LS+N + L + L L +L L N + ++P V G
Sbjct: 232 QIGTLSPGLFHNNRNLQRLYLSNNHISQLPPGIFMQLPQLNKLTLFGNSLRELSPGVFGP 291
Query: 130 NVTITTLTL 138
+ L L
Sbjct: 292 MPNLRELWL 300
Score = 112 (44.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 30/129 (23%), Positives = 58/129 (44%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
+ +L+ L + +N +S+ + L++L L HNQ+ + +F L+ L L L N
Sbjct: 292 MPNLRELWLYNNHITSLADNTFSHLNQLQVLILSHNQLTYISPGAFNGLTNLRELSLHTN 351
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+ + L+NL + L N LR L + + L ++L +N++ + +
Sbjct: 352 ALQDLDSNVFRSLANLQNISLQSNRLRQLPGSIFANVNGLTTIQLQNNNLENLPLGIFDH 411
Query: 130 NVTITTLTL 138
V + L L
Sbjct: 412 LVNLCELRL 420
Score = 110 (43.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 28/123 (22%), Positives = 58/123 (47%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
L + + + + + L +L N++ + +FR L +L +L LA+N++ +
Sbjct: 58 LQVVNTHITELPENLFLNISALIALKMEKNELSTIMPGAFRNLGSLRYLSLANNKLRMLP 117
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITT 135
++NL +L LS+N L + + +L+EL+L N++ + + V +T
Sbjct: 118 IRVFQDVNNLESLLLSNNQLVQIQPAQFSQFSNLRELQLHGNNLESIPEEAFDHLVGLTK 177
Query: 136 LTL 138
L L
Sbjct: 178 LNL 180
Score = 107 (42.7 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 34/133 (25%), Positives = 56/133 (42%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T L +L+ L++ NQ ++ G L L +N I L F L L+ L
Sbjct: 216 TFDALGNLQELALQENQIGTLSPGLFHNNRNLQRLYLSNNHISQLPPGIFMQLPQLNKLT 275
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
L N + +S + NL L L +N + +L + + L LQ L L N ++ ++P
Sbjct: 276 LFGNSLRELSPGVFGPMPNLRELWLYNNHITSLADNTFSHLNQLQVLILSHNQLTYISPG 335
Query: 126 VIGDNVTITTLTL 138
+ L+L
Sbjct: 336 AFNGLTNLRELSL 348
>UNIPROTKB|F1N7G4 [details] [associations]
symbol:ISLR2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA]
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0009986 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0045773
InterPro:IPR000372 SMART:SM00013 CTD:57611 OMA:PRASYLE
GeneTree:ENSGT00700000104028 EMBL:DAAA02052518 IPI:IPI01001322
RefSeq:XP_002696730.1 UniGene:Bt.86635 Ensembl:ENSBTAT00000003445
GeneID:617436 KEGG:bta:617436 NextBio:20900664 Uniprot:F1N7G4
Length = 750
Score = 185 (70.2 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 40/114 (35%), Positives = 70/114 (61%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
+++ LS++ N+ + +RRGA A + ++TSL HN++ +E S LS L +LDL+HN
Sbjct: 51 ANVTTLSLSANKITVLRRGAFADVTQVTSLWLAHNEVRTVEPGSLAVLSQLKNLDLSHNL 110
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTP 124
I + + L +LS L L ++HN L +L +D + L L+ LR+++N + + P
Sbjct: 111 ISSFPWSDLRNLSALQLLKMNHNRLGSLPRDALGALPDLRSLRINNNRLRTLAP 164
Score = 139 (54.0 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 37/110 (33%), Positives = 58/110 (52%)
Query: 19 AHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGAS 78
A+ + V G A + T+LS N+I VL +F ++ ++ L LAHN + V S
Sbjct: 38 AYKELREVPEGLPANV---TTLSLSANKITVLRRGAFADVTQVTSLWLAHNEVRTVEPGS 94
Query: 79 LAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
LA LS L LDLSHN + + + L +LQ L+++ N + + D +G
Sbjct: 95 LAVLSQLKNLDLSHNLISSFPWSDLRNLSALQLLKMNHNRLGSLPRDALG 144
Score = 136 (52.9 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 29/66 (43%), Positives = 41/66 (62%)
Query: 4 WCTVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 63
W +R LS+L++L + HN+ S+ R AL L L SL ++N++ L +F ALS LSH
Sbjct: 116 WSDLRNLSALQLLKMNHNRLGSLPRDALGALPDLRSLRINNNRLRTLAPGTFDALSALSH 175
Query: 64 LDLAHN 69
L L HN
Sbjct: 176 LQLYHN 181
Score = 133 (51.9 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 35/102 (34%), Positives = 53/102 (51%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
L +AHN+ +V G+LA L +L +L HN I R LS L L + HNR+ ++
Sbjct: 80 LWLAHNEVRTVEPGSLAVLSQLKNLDLSHNLISSFPWSDLRNLSALQLLKMNHNRLGSLP 139
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
+L L +L +L +++N LR L L +L L+L N
Sbjct: 140 RDALGALPDLRSLRINNNRLRTLAPGTFDALSALSHLQLYHN 181
Score = 104 (41.7 bits), Expect = 0.00013, P = 0.00013
Identities = 29/84 (34%), Positives = 42/84 (50%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
LS LK L ++HN SS L L L L +HN++ L + AL L L + +N
Sbjct: 98 LSQLKNLDLSHNLISSFPWSDLRNLSALQLLKMNHNRLGSLPRDALGALPDLRSLRINNN 157
Query: 70 RIVAVSGASLAHLSNLTTLDLSHN 93
R+ ++ + LS L+ L L HN
Sbjct: 158 RLRTLAPGTFDALSALSHLQLYHN 181
>UNIPROTKB|A1A4H9 [details] [associations]
symbol:LRRTM1 "Leucine-rich repeat transmembrane neuronal
protein 1" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372
SMART:SM00013 EMBL:BC126503 IPI:IPI00706066 RefSeq:NP_001073773.1
UniGene:Bt.34711 ProteinModelPortal:A1A4H9 PRIDE:A1A4H9
GeneID:538452 KEGG:bta:538452 CTD:347730 HOGENOM:HOG000290681
HOVERGEN:HBG052362 InParanoid:A1A4H9 KO:K16665 OrthoDB:EOG4FN4HG
NextBio:20877367 Uniprot:A1A4H9
Length = 521
Score = 182 (69.1 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 46/129 (35%), Positives = 71/129 (55%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
SLK L I +NQ S+ R + AGL KLT L HN + + F L +L L L N+
Sbjct: 186 SLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLRRNK- 244
Query: 72 VAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNV 131
VA+ +SL + NL +DLS N + + + + LQ L+LD N ++ V P ++
Sbjct: 245 VAIVVSSLDWVWNLEKMDLSGNEIEYMEPHVFETVPHLQSLQLDSNRLTYVEPRILNSWK 304
Query: 132 TITTLTLSG 140
++T++TL+G
Sbjct: 305 SLTSITLAG 313
Score = 166 (63.5 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 41/120 (34%), Positives = 63/120 (52%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
LS L LS+ +N S +R G GL +LT L HN I ++ +F+ L + L L+ N
Sbjct: 64 LSGLLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSN 123
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+I ++ + + NL ++DLS+N L+AL DL L+ L L + N I V + D
Sbjct: 124 QITQLANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQD 183
Score = 123 (48.4 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 39/136 (28%), Positives = 67/136 (49%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T R + +L+ + +++N+ ++ GL KLT+L N I + F+ +L LD
Sbjct: 132 TFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLD 191
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
+ +N++ +++ S A L LT L L HN L + L SL L L N +++V
Sbjct: 192 IGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLRRNKVAIVVSS 251
Query: 126 VIGDNV-TITTLTLSG 140
+ D V + + LSG
Sbjct: 252 L--DWVWNLEKMDLSG 265
Score = 116 (45.9 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 36/130 (27%), Positives = 63/130 (48%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L L + HN SV+ A L ++ L+ NQI L + +FR + L +DL++N
Sbjct: 88 LMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLANTTFRPMPNLRSVDLSYN 147
Query: 70 RIVAVSGASLAH-LSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
++ A++ L H L LTTL + N ++ + + +SL+ L + N + + +
Sbjct: 148 KLQALA-PDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFA 206
Query: 129 DNVTITTLTL 138
+T L L
Sbjct: 207 GLFKLTELHL 216
Score = 115 (45.5 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 31/103 (30%), Positives = 46/103 (44%)
Query: 34 LDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHN 93
L L LS +N + L F L L+ L L HN I +V G + L + L LS N
Sbjct: 64 LSGLLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSN 123
Query: 94 FLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTL 136
+ L P+ +L+ + L N + + PD+ +TTL
Sbjct: 124 QITQLANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTL 166
Score = 112 (44.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/115 (26%), Positives = 54/115 (46%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
++L +K L+++ NQ + + + L S+ +N++ L F L L+ L +
Sbjct: 110 QKLRRVKELTLSSNQITQLANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMR 169
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
N I V +L LD+ +N L++L ++ L L EL L+ ND+ V
Sbjct: 170 ANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKV 224
>RGD|1585921 [details] [associations]
symbol:LRRTM1 "leucine rich repeat transmembrane neuronal 1"
species:10116 "Rattus norvegicus" [GO:0005783 "endoplasmic
reticulum" evidence=IEA;ISO] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007610 "behavior" evidence=IEA;ISO] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030424 "axon" evidence=IEA;ISO] [GO:0030426
"growth cone" evidence=IEA;ISO] [GO:0035418 "protein localization
to synapse" evidence=IEA;ISO] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0050808 "synapse organization" evidence=ISO;IDA]
[GO:0060076 "excitatory synapse" evidence=IDA] [GO:0009986 "cell
surface" evidence=ISO] InterPro:IPR001611 PROSITE:PS51450
RGD:1585921 GO:GO:0005783 GO:GO:0016021 GO:GO:0005886 GO:GO:0007610
GO:GO:0030054 GO:GO:0045211 GO:GO:0030424 InterPro:IPR003591
SMART:SM00369 GO:GO:0050808 GO:GO:0030426 InterPro:IPR000372
SMART:SM00013 GO:GO:0060076 GO:GO:0035418 EMBL:CH473957
GeneTree:ENSGT00700000104056 CTD:347730 KO:K16665 OrthoDB:EOG4FN4HG
OMA:EPDLFHG IPI:IPI00364927 RefSeq:NP_001102844.1 UniGene:Rn.171424
PRIDE:D4A6D8 Ensembl:ENSRNOT00000007993 GeneID:679668
KEGG:rno:679668 UCSC:RGD:1585921 NextBio:716984 Uniprot:D4A6D8
Length = 523
Score = 182 (69.1 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 45/129 (34%), Positives = 72/129 (55%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
SLK L I +NQ S+ R + AGL KLT L HN + + F L +L+ L L N+
Sbjct: 186 SLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLIKVNFAHFPRLISLNSLCLRRNK- 244
Query: 72 VAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNV 131
VA+ +SL + NL +DLS N + + + + LQ L+LD N ++ + P ++
Sbjct: 245 VAIVVSSLDWVWNLEKMDLSGNEIEYMEPHVFETVPYLQSLQLDSNRLTYIEPRILNSWK 304
Query: 132 TITTLTLSG 140
++T++TL+G
Sbjct: 305 SLTSITLAG 313
Score = 166 (63.5 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 41/120 (34%), Positives = 63/120 (52%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
LS L LS+ +N S +R G GL +LT L HN I ++ +F+ L + L L+ N
Sbjct: 64 LSGLLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSN 123
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+I ++ + + NL ++DLS+N L+AL DL L+ L L + N I V + D
Sbjct: 124 QITELANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQD 183
Score = 123 (48.4 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 39/136 (28%), Positives = 67/136 (49%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T R + +L+ + +++N+ ++ GL KLT+L N I + F+ +L LD
Sbjct: 132 TFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLD 191
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
+ +N++ +++ S A L LT L L HN L + L SL L L N +++V
Sbjct: 192 IGYNQLKSLARNSFAGLFKLTELHLEHNDLIKVNFAHFPRLISLNSLCLRRNKVAIVVSS 251
Query: 126 VIGDNV-TITTLTLSG 140
+ D V + + LSG
Sbjct: 252 L--DWVWNLEKMDLSG 265
Score = 116 (45.9 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 36/130 (27%), Positives = 63/130 (48%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L L + HN SV+ A L ++ L+ NQI L + +FR + L +DL++N
Sbjct: 88 LMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITELANTTFRPMPNLRSVDLSYN 147
Query: 70 RIVAVSGASLAH-LSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
++ A++ L H L LTTL + N ++ + + +SL+ L + N + + +
Sbjct: 148 KLQALA-PDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFA 206
Query: 129 DNVTITTLTL 138
+T L L
Sbjct: 207 GLFKLTELHL 216
Score = 115 (45.5 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 31/103 (30%), Positives = 46/103 (44%)
Query: 34 LDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHN 93
L L LS +N + L F L L+ L L HN I +V G + L + L LS N
Sbjct: 64 LSGLLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSN 123
Query: 94 FLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTL 136
+ L P+ +L+ + L N + + PD+ +TTL
Sbjct: 124 QITELANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTL 166
Score = 112 (44.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/115 (26%), Positives = 54/115 (46%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
++L +K L+++ NQ + + + L S+ +N++ L F L L+ L +
Sbjct: 110 QKLRRVKELTLSSNQITELANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMR 169
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
N I V +L LD+ +N L++L ++ L L EL L+ ND+ V
Sbjct: 170 ANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLIKV 224
>UNIPROTKB|E2QW21 [details] [associations]
symbol:LRRTM1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050808 "synapse organization" evidence=IEA]
[GO:0035418 "protein localization to synapse" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0007610 "behavior" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005783 GO:GO:0007610 GO:GO:0030424
InterPro:IPR003591 SMART:SM00369 GO:GO:0050808 GO:GO:0030426
InterPro:IPR000372 SMART:SM00013 GO:GO:0035418
GeneTree:ENSGT00700000104056 CTD:347730 KO:K16665 OMA:EPDLFHG
EMBL:AAEX03010953 RefSeq:XP_540204.1 ProteinModelPortal:E2QW21
Ensembl:ENSCAFT00000012896 GeneID:483089 KEGG:cfa:483089
NextBio:20857544 Uniprot:E2QW21
Length = 522
Score = 181 (68.8 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 45/129 (34%), Positives = 71/129 (55%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
SLK L I +NQ S+ R + AGL KLT L HN + + F L +L L L N+
Sbjct: 186 SLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLKRNK- 244
Query: 72 VAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNV 131
VA+ +SL + NL +DLS N + + + + LQ L+LD N ++ + P ++
Sbjct: 245 VAIVVSSLDWVWNLEKMDLSGNEIEYMEPHVFETVPHLQSLQLDSNRLTYIEPRILNSWK 304
Query: 132 TITTLTLSG 140
++T++TL+G
Sbjct: 305 SLTSITLAG 313
Score = 168 (64.2 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 41/120 (34%), Positives = 63/120 (52%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
LS L LS+ +N S +R G GL +LT L HN I ++ +F+ L + L L+ N
Sbjct: 64 LSGLLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSN 123
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+I ++ + + NL ++DLS+N L+AL DL L+ L L + N I V + D
Sbjct: 124 QITQLANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRSNAIQFVPVRIFQD 183
Score = 125 (49.1 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 39/136 (28%), Positives = 67/136 (49%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T R + +L+ + +++N+ ++ GL KLT+L N I + F+ +L LD
Sbjct: 132 TFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRSNAIQFVPVRIFQDCRSLKFLD 191
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
+ +N++ +++ S A L LT L L HN L + L SL L L N +++V
Sbjct: 192 IGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLKRNKVAIVVSS 251
Query: 126 VIGDNV-TITTLTLSG 140
+ D V + + LSG
Sbjct: 252 L--DWVWNLEKMDLSG 265
Score = 117 (46.2 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 36/130 (27%), Positives = 63/130 (48%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L L + HN SV+ A L ++ L+ NQI L + +FR + L +DL++N
Sbjct: 88 LMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLANTTFRPMPNLRSVDLSYN 147
Query: 70 RIVAVSGASLAH-LSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
++ A++ L H L LTTL + N ++ + + +SL+ L + N + + +
Sbjct: 148 KLQALA-PDLFHGLRKLTTLHMRSNAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFA 206
Query: 129 DNVTITTLTL 138
+T L L
Sbjct: 207 GLFKLTELHL 216
Score = 115 (45.5 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 31/103 (30%), Positives = 46/103 (44%)
Query: 34 LDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHN 93
L L LS +N + L F L L+ L L HN I +V G + L + L LS N
Sbjct: 64 LSGLLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSN 123
Query: 94 FLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTL 136
+ L P+ +L+ + L N + + PD+ +TTL
Sbjct: 124 QITQLANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTL 166
Score = 113 (44.8 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 30/115 (26%), Positives = 54/115 (46%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
++L +K L+++ NQ + + + L S+ +N++ L F L L+ L +
Sbjct: 110 QKLRRVKELTLSSNQITQLANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMR 169
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
N I V +L LD+ +N L++L ++ L L EL L+ ND+ V
Sbjct: 170 SNAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKV 224
>UNIPROTKB|I3L5J3 [details] [associations]
symbol:LRRTM1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050808 "synapse organization" evidence=IEA]
[GO:0035418 "protein localization to synapse" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0007610 "behavior" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005783 GO:GO:0007610 GO:GO:0030424
InterPro:IPR003591 SMART:SM00369 GO:GO:0050808 GO:GO:0030426
InterPro:IPR000372 SMART:SM00013 GO:GO:0035418
GeneTree:ENSGT00700000104056 KO:K16665 OMA:EPDLFHG EMBL:CU928791
RefSeq:XP_003125000.1 Ensembl:ENSSSCT00000025495 GeneID:100520483
KEGG:ssc:100520483 Uniprot:I3L5J3
Length = 522
Score = 181 (68.8 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 45/129 (34%), Positives = 71/129 (55%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
SLK L I +NQ S+ R + AGL KLT L HN + + F L +L L L N+
Sbjct: 186 SLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLRRNK- 244
Query: 72 VAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNV 131
VA+ +SL + NL +DLS N + + + + LQ L+LD N ++ + P ++
Sbjct: 245 VAIVVSSLDWVWNLEKMDLSGNEIEYMEPHVFETVPHLQSLQLDSNRLTYIEPRILNSWK 304
Query: 132 TITTLTLSG 140
++T++TL+G
Sbjct: 305 SLTSITLAG 313
Score = 166 (63.5 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 41/120 (34%), Positives = 63/120 (52%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
LS L LS+ +N S +R G GL +LT L HN I ++ +F+ L + L L+ N
Sbjct: 64 LSGLLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSN 123
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+I ++ + + NL ++DLS+N L+AL DL L+ L L + N I V + D
Sbjct: 124 QITQLANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQD 183
Score = 123 (48.4 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 39/136 (28%), Positives = 67/136 (49%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T R + +L+ + +++N+ ++ GL KLT+L N I + F+ +L LD
Sbjct: 132 TFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLD 191
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
+ +N++ +++ S A L LT L L HN L + L SL L L N +++V
Sbjct: 192 IGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLRRNKVAIVVSS 251
Query: 126 VIGDNV-TITTLTLSG 140
+ D V + + LSG
Sbjct: 252 L--DWVWNLEKMDLSG 265
Score = 116 (45.9 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 36/130 (27%), Positives = 63/130 (48%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L L + HN SV+ A L ++ L+ NQI L + +FR + L +DL++N
Sbjct: 88 LMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLANTTFRPMPNLRSVDLSYN 147
Query: 70 RIVAVSGASLAH-LSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
++ A++ L H L LTTL + N ++ + + +SL+ L + N + + +
Sbjct: 148 KLQALA-PDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFA 206
Query: 129 DNVTITTLTL 138
+T L L
Sbjct: 207 GLFKLTELHL 216
Score = 115 (45.5 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 31/103 (30%), Positives = 46/103 (44%)
Query: 34 LDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHN 93
L L LS +N + L F L L+ L L HN I +V G + L + L LS N
Sbjct: 64 LSGLLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSN 123
Query: 94 FLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTL 136
+ L P+ +L+ + L N + + PD+ +TTL
Sbjct: 124 QITQLANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTL 166
Score = 112 (44.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/115 (26%), Positives = 54/115 (46%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
++L +K L+++ NQ + + + L S+ +N++ L F L L+ L +
Sbjct: 110 QKLRRVKELTLSSNQITQLANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMR 169
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
N I V +L LD+ +N L++L ++ L L EL L+ ND+ V
Sbjct: 170 ANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKV 224
>UNIPROTKB|Q86UE6 [details] [associations]
symbol:LRRTM1 "Leucine-rich repeat transmembrane neuronal
protein 1" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0007610 "behavior" evidence=IEA] [GO:0035418 "protein
localization to synapse" evidence=IEA] [GO:0050808 "synapse
organization" evidence=IEA] [GO:0060076 "excitatory synapse"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030426
"growth cone" evidence=IDA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0009986 "cell surface" evidence=IDA] [GO:0030424 "axon"
evidence=IDA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005783 GO:GO:0016021
GO:GO:0005886 EMBL:CH471053 GO:GO:0007610 GO:GO:0030054
GO:GO:0045211 GO:GO:0030424 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 GO:GO:0050808 GO:GO:0030426 InterPro:IPR000372
SMART:SM00013 GO:GO:0035418 CTD:347730 HOGENOM:HOG000290681
HOVERGEN:HBG052362 KO:K16665 OrthoDB:EOG4FN4HG EMBL:AY182024
EMBL:AK056644 EMBL:AK290512 EMBL:AY358310 EMBL:BC045113
IPI:IPI00328716 RefSeq:NP_849161.2 UniGene:Hs.591580
ProteinModelPortal:Q86UE6 SMR:Q86UE6 MINT:MINT-7027295
STRING:Q86UE6 PhosphoSite:Q86UE6 DMDM:146330009 PRIDE:Q86UE6
DNASU:347730 Ensembl:ENST00000295057 Ensembl:ENST00000409148
Ensembl:ENST00000417012 Ensembl:ENST00000433224 GeneID:347730
KEGG:hsa:347730 UCSC:uc002sok.1 GeneCards:GC02M080427
H-InvDB:HIX0002207 HGNC:HGNC:19408 MIM:610867 neXtProt:NX_Q86UE6
PharmGKB:PA134887293 InParanoid:Q86UE6 OMA:EPDLFHG PhylomeDB:Q86UE6
GenomeRNAi:347730 NextBio:99250 ArrayExpress:Q86UE6 Bgee:Q86UE6
CleanEx:HS_LRRTM1 Genevestigator:Q86UE6 GermOnline:ENSG00000162951
Uniprot:Q86UE6
Length = 522
Score = 181 (68.8 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 45/129 (34%), Positives = 71/129 (55%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
SLK L I +NQ S+ R + AGL KLT L HN + + F L +L L L N+
Sbjct: 186 SLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLRRNK- 244
Query: 72 VAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNV 131
VA+ +SL + NL +DLS N + + + + LQ L+LD N ++ + P ++
Sbjct: 245 VAIVVSSLDWVWNLEKMDLSGNEIEYMEPHVFETVPHLQSLQLDSNRLTYIEPRILNSWK 304
Query: 132 TITTLTLSG 140
++T++TL+G
Sbjct: 305 SLTSITLAG 313
Score = 164 (62.8 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 41/120 (34%), Positives = 62/120 (51%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
LS L LS+ +N S +R G GL +LT L HN I ++ +F+ L + L L+ N
Sbjct: 64 LSGLLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSN 123
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+I + + + NL ++DLS+N L+AL DL L+ L L + N I V + D
Sbjct: 124 QITQLPNTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQD 183
Score = 123 (48.4 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 39/136 (28%), Positives = 67/136 (49%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T R + +L+ + +++N+ ++ GL KLT+L N I + F+ +L LD
Sbjct: 132 TFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLD 191
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
+ +N++ +++ S A L LT L L HN L + L SL L L N +++V
Sbjct: 192 IGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNFAHFPRLISLHSLCLRRNKVAIVVSS 251
Query: 126 VIGDNV-TITTLTLSG 140
+ D V + + LSG
Sbjct: 252 L--DWVWNLEKMDLSG 265
Score = 116 (45.9 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 36/130 (27%), Positives = 63/130 (48%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L L + HN SV+ A L ++ L+ NQI L + +FR + L +DL++N
Sbjct: 88 LMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLPNTTFRPMPNLRSVDLSYN 147
Query: 70 RIVAVSGASLAH-LSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
++ A++ L H L LTTL + N ++ + + +SL+ L + N + + +
Sbjct: 148 KLQALA-PDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFA 206
Query: 129 DNVTITTLTL 138
+T L L
Sbjct: 207 GLFKLTELHL 216
Score = 114 (45.2 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 31/103 (30%), Positives = 46/103 (44%)
Query: 34 LDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHN 93
L L LS +N + L F L L+ L L HN I +V G + L + L LS N
Sbjct: 64 LSGLLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSN 123
Query: 94 FLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTL 136
+ L P+ +L+ + L N + + PD+ +TTL
Sbjct: 124 QITQLPNTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTL 166
Score = 111 (44.1 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 30/115 (26%), Positives = 54/115 (46%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
++L +K L+++ NQ + + + L S+ +N++ L F L L+ L +
Sbjct: 110 QKLRRVKELTLSSNQITQLPNTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMR 169
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
N I V +L LD+ +N L++L ++ L L EL L+ ND+ V
Sbjct: 170 ANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKV 224
>MGI|MGI:2389173 [details] [associations]
symbol:Lrrtm1 "leucine rich repeat transmembrane neuronal 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005783 "endoplasmic reticulum" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007610 "behavior"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=ISS] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030424 "axon" evidence=ISO] [GO:0030426 "growth
cone" evidence=ISO] [GO:0035418 "protein localization to synapse"
evidence=IMP] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0050808 "synapse
organization" evidence=IGI;ISO;IMP] [GO:0060076 "excitatory
synapse" evidence=ISO] InterPro:IPR001611 PROSITE:PS51450
MGI:MGI:2389173 GO:GO:0005783 GO:GO:0016021 GO:GO:0005886
GO:GO:0007610 GO:GO:0030054 GO:GO:0045211 GO:GO:0030424
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0050808
GO:GO:0030426 InterPro:IPR000372 SMART:SM00013 GO:GO:0035418
GeneTree:ENSGT00700000104056 CTD:347730 HOGENOM:HOG000290681
HOVERGEN:HBG052362 KO:K16665 OrthoDB:EOG4FN4HG OMA:EPDLFHG
EMBL:AY182025 EMBL:AK053345 EMBL:AK053364 EMBL:AK136857
EMBL:BC027803 IPI:IPI00170022 RefSeq:NP_083156.2 UniGene:Mm.292568
ProteinModelPortal:Q8K377 SMR:Q8K377 IntAct:Q8K377 STRING:Q8K377
PhosphoSite:Q8K377 PaxDb:Q8K377 PRIDE:Q8K377
Ensembl:ENSMUST00000020400 Ensembl:ENSMUST00000159616
Ensembl:ENSMUST00000161677 GeneID:74342 KEGG:mmu:74342
UCSC:uc009cjt.1 InParanoid:Q8K377 NextBio:340493 Bgee:Q8K377
CleanEx:MM_LRRTM1 Genevestigator:Q8K377
GermOnline:ENSMUSG00000060780 Uniprot:Q8K377
Length = 522
Score = 179 (68.1 bits), Expect = 6.6e-13, P = 6.6e-13
Identities = 45/129 (34%), Positives = 71/129 (55%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
SLK L I +NQ S+ R + AGL KLT L HN + + F L +L L L N+
Sbjct: 186 SLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLIKVNFAHFPRLISLHSLCLRRNK- 244
Query: 72 VAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNV 131
VA+ +SL + NL +DLS N + + + + LQ L+LD N ++ + P ++
Sbjct: 245 VAIVVSSLDWVWNLEKMDLSGNEIEYMEPHVFETVPYLQTLQLDSNRLTYIEPRILNSWK 304
Query: 132 TITTLTLSG 140
++T++TL+G
Sbjct: 305 SLTSITLAG 313
Score = 166 (63.5 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 41/120 (34%), Positives = 63/120 (52%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
LS L LS+ +N S +R G GL +LT L HN I ++ +F+ L + L L+ N
Sbjct: 64 LSGLLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSN 123
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+I ++ + + NL ++DLS+N L+AL DL L+ L L + N I V + D
Sbjct: 124 QITELANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQD 183
Score = 123 (48.4 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 39/136 (28%), Positives = 67/136 (49%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T R + +L+ + +++N+ ++ GL KLT+L N I + F+ +L LD
Sbjct: 132 TFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLD 191
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
+ +N++ +++ S A L LT L L HN L + L SL L L N +++V
Sbjct: 192 IGYNQLKSLARNSFAGLFKLTELHLEHNDLIKVNFAHFPRLISLHSLCLRRNKVAIVVSS 251
Query: 126 VIGDNV-TITTLTLSG 140
+ D V + + LSG
Sbjct: 252 L--DWVWNLEKMDLSG 265
Score = 116 (45.9 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 36/130 (27%), Positives = 63/130 (48%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L L + HN SV+ A L ++ L+ NQI L + +FR + L +DL++N
Sbjct: 88 LMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITELANTTFRPMPNLRSVDLSYN 147
Query: 70 RIVAVSGASLAH-LSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
++ A++ L H L LTTL + N ++ + + +SL+ L + N + + +
Sbjct: 148 KLQALA-PDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFA 206
Query: 129 DNVTITTLTL 138
+T L L
Sbjct: 207 GLFKLTELHL 216
Score = 115 (45.5 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 31/103 (30%), Positives = 46/103 (44%)
Query: 34 LDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHN 93
L L LS +N + L F L L+ L L HN I +V G + L + L LS N
Sbjct: 64 LSGLLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSN 123
Query: 94 FLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTL 136
+ L P+ +L+ + L N + + PD+ +TTL
Sbjct: 124 QITELANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTL 166
Score = 112 (44.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/115 (26%), Positives = 54/115 (46%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
++L +K L+++ NQ + + + L S+ +N++ L F L L+ L +
Sbjct: 110 QKLRRVKELTLSSNQITELANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMR 169
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
N I V +L LD+ +N L++L ++ L L EL L+ ND+ V
Sbjct: 170 ANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLIKV 224
>UNIPROTKB|Q6UXK2 [details] [associations]
symbol:ISLR2 "Immunoglobulin superfamily containing
leucine-rich repeat protein 2" species:9606 "Homo sapiens"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0009986 "cell surface"
evidence=ISS] [GO:0045773 "positive regulation of axon extension"
evidence=ISS] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886 GO:GO:0009986
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0045773 InterPro:IPR000372 SMART:SM00013
HSSP:Q9BZR6 EMBL:AB040898 EMBL:AY358316 EMBL:AK290467
IPI:IPI00479654 RefSeq:NP_001123608.1 RefSeq:NP_001123609.1
RefSeq:NP_001123610.1 RefSeq:NP_065902.1 UniGene:Hs.254775
ProteinModelPortal:Q6UXK2 SMR:Q6UXK2 IntAct:Q6UXK2 STRING:Q6UXK2
PhosphoSite:Q6UXK2 DMDM:74758577 PaxDb:Q6UXK2 PRIDE:Q6UXK2
Ensembl:ENST00000361742 Ensembl:ENST00000419208
Ensembl:ENST00000435464 Ensembl:ENST00000445793
Ensembl:ENST00000453268 Ensembl:ENST00000565159
Ensembl:ENST00000565540 GeneID:57611 KEGG:hsa:57611 UCSC:uc002axd.3
CTD:57611 GeneCards:GC15P074421 HGNC:HGNC:29286 MIM:614179
neXtProt:NX_Q6UXK2 PharmGKB:PA143485505 eggNOG:NOG240332
HOGENOM:HOG000113108 HOVERGEN:HBG100863 InParanoid:Q6UXK2
OMA:PRASYLE OrthoDB:EOG4QC14W GenomeRNAi:57611 NextBio:64263
ArrayExpress:Q6UXK2 Bgee:Q6UXK2 CleanEx:HS_ISLR2
Genevestigator:Q6UXK2 Uniprot:Q6UXK2
Length = 745
Score = 181 (68.8 bits), Expect = 7.3e-13, P = 7.3e-13
Identities = 39/114 (34%), Positives = 70/114 (61%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
+++ LS++ N+ + +RRGA A + ++TSL HN++ +E + LS L +LDL+HN
Sbjct: 51 ANVTTLSLSANKITVLRRGAFADVTQVTSLWLAHNEVRTVEPGALAVLSQLKNLDLSHNF 110
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTP 124
I + + L +LS L L ++HN L +L +D + L L+ LR+++N + + P
Sbjct: 111 ISSFPWSDLRNLSALQLLKMNHNRLGSLPRDALGALPDLRSLRINNNRLRTLAP 164
Score = 142 (55.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 37/110 (33%), Positives = 59/110 (53%)
Query: 19 AHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGAS 78
A+ + V G A + T+LS N+I VL +F ++ ++ L LAHN + V +
Sbjct: 38 AYKELREVPEGLPANV---TTLSLSANKITVLRRGAFADVTQVTSLWLAHNEVRTVEPGA 94
Query: 79 LAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
LA LS L LDLSHNF+ + + L +LQ L+++ N + + D +G
Sbjct: 95 LAVLSQLKNLDLSHNFISSFPWSDLRNLSALQLLKMNHNRLGSLPRDALG 144
Score = 136 (52.9 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 29/66 (43%), Positives = 41/66 (62%)
Query: 4 WCTVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 63
W +R LS+L++L + HN+ S+ R AL L L SL ++N++ L +F ALS LSH
Sbjct: 116 WSDLRNLSALQLLKMNHNRLGSLPRDALGALPDLRSLRINNNRLRTLAPGTFDALSALSH 175
Query: 64 LDLAHN 69
L L HN
Sbjct: 176 LQLYHN 181
Score = 135 (52.6 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 36/102 (35%), Positives = 53/102 (51%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
L +AHN+ +V GALA L +L +L HN I R LS L L + HNR+ ++
Sbjct: 80 LWLAHNEVRTVEPGALAVLSQLKNLDLSHNFISSFPWSDLRNLSALQLLKMNHNRLGSLP 139
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
+L L +L +L +++N LR L L +L L+L N
Sbjct: 140 RDALGALPDLRSLRINNNRLRTLAPGTFDALSALSHLQLYHN 181
Score = 103 (41.3 bits), Expect = 0.00016, P = 0.00016
Identities = 29/84 (34%), Positives = 42/84 (50%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
LS LK L ++HN SS L L L L +HN++ L + AL L L + +N
Sbjct: 98 LSQLKNLDLSHNFISSFPWSDLRNLSALQLLKMNHNRLGSLPRDALGALPDLRSLRINNN 157
Query: 70 RIVAVSGASLAHLSNLTTLDLSHN 93
R+ ++ + LS L+ L L HN
Sbjct: 158 RLRTLAPGTFDALSALSHLQLYHN 181
>UNIPROTKB|F1NHS1 [details] [associations]
symbol:F1NHS1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 Pfam:PF00054
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 Pfam:PF01463
GeneTree:ENSGT00700000104083 EMBL:AADN02046435 EMBL:AADN02046436
EMBL:AADN02046437 EMBL:AADN02046438 EMBL:AADN02046439
EMBL:AADN02046440 EMBL:AADN02046441 EMBL:AADN02046442
IPI:IPI00597520 ProteinModelPortal:F1NHS1
Ensembl:ENSGALT00000039424 Uniprot:F1NHS1
Length = 738
Score = 123 (48.4 bits), Expect = 9.2e-13, Sum P(2) = 9.2e-13
Identities = 31/84 (36%), Positives = 50/84 (59%)
Query: 58 LSTLSHL---DLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRL 114
LST +L DL++NRI ++S +S ++S LTTL LS+N L+ + L+SL+ L L
Sbjct: 190 LSTFKYLQLVDLSNNRISSLSNSSFTNMSQLTTLILSYNSLQCIPPLAFEGLRSLRLLSL 249
Query: 115 DDNDISMVTPDVIGDNVTITTLTL 138
NDIS + + D +++ L +
Sbjct: 250 HGNDISTLPEGIFADVTSLSHLAI 273
Score = 97 (39.2 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 23/81 (28%), Positives = 42/81 (51%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
L +LS+ N+ S+ +G L + +L +N+I + + SF L + L L N+I
Sbjct: 1 LSLLSLYDNKIQSLAKGTFTSLRAIQTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIS 60
Query: 73 AVSGASLAHLSNLTTLDLSHN 93
++ + L +L+TL+L N
Sbjct: 61 TIAPGAFDTLQSLSTLNLLAN 81
Score = 82 (33.9 bits), Expect = 9.2e-13, Sum P(2) = 9.2e-13
Identities = 19/64 (29%), Positives = 33/64 (51%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T L +++ L + +N+ S + + GL + LS + NQI + +F L +LS L+
Sbjct: 18 TFTSLRAIQTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQISTIAPGAFDTLQSLSTLN 77
Query: 66 LAHN 69
L N
Sbjct: 78 LLAN 81
Score = 42 (19.8 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 86 TTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
T + S+ L+AL + + P K++ EL LD N + V
Sbjct: 153 TVVRCSNKHLKALPRGI--P-KNVTELYLDGNQFTQV 186
>MGI|MGI:1921738 [details] [associations]
symbol:Lrrc15 "leucine rich repeat containing 15"
species:10090 "Mus musculus" [GO:0005622 "intracellular"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1921738 GO:GO:0016021
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104286 CTD:131578 HOGENOM:HOG000040004
HOVERGEN:HBG052343 OMA:NHLEYIP OrthoDB:EOG4QVCCN EMBL:BC050245
IPI:IPI00330681 RefSeq:NP_083249.1 UniGene:Mm.290677
ProteinModelPortal:Q80X72 SMR:Q80X72 STRING:Q80X72
PhosphoSite:Q80X72 PRIDE:Q80X72 Ensembl:ENSMUST00000064606
GeneID:74488 KEGG:mmu:74488 UCSC:uc007ywn.2 InParanoid:Q80X72
NextBio:340930 Bgee:Q80X72 CleanEx:MM_LRRC15 Genevestigator:Q80X72
GermOnline:ENSMUSG00000052316 Uniprot:Q80X72
Length = 579
Score = 178 (67.7 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 41/108 (37%), Positives = 64/108 (59%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L+ L+VL ++HNQ S + GA GL L LS H N + L+ + FR+L+ L ++ L +N
Sbjct: 316 LNQLQVLILSHNQLSYISPGAFNGLTNLRELSLHTNALQDLDGNVFRSLANLRNVSLQNN 375
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
R+ + G+ A+++ L T+ L +N L L + L +L ELRL DN
Sbjct: 376 RLRQLPGSIFANVNGLMTIQLQNNNLENLPLGIFDHLGNLCELRLYDN 423
Score = 136 (52.9 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 35/130 (26%), Positives = 62/130 (47%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
+++L+ L +++NQ ++ + L L + N ++ + + F L L+ L+L +N
Sbjct: 124 VNNLETLLLSNNQLVQIQPAQFSQFSNLKELQLYGNNLEYIPEGVFDHLVGLTKLNLGNN 183
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+S HL NL L L N L + L +LQEL L +N I ++P + +
Sbjct: 184 GFTHLSPRVFQHLGNLQVLRLYENRLSDIPMGTFDALGNLQELALQENQIGTLSPGLFHN 243
Query: 130 NVTITTLTLS 139
N + L LS
Sbjct: 244 NRNLQRLYLS 253
Score = 132 (51.5 bits), Expect = 9.1e-08, P = 9.1e-08
Identities = 39/125 (31%), Positives = 62/125 (49%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
R L SL+ LS+A+N+ ++ ++ L +L +NQ+ ++ F S L L L
Sbjct: 98 RNLGSLRHLSLANNKLKNLPVRLFQDVNNLETLLLSNNQLVQIQPAQFSQFSNLKELQLY 157
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN---DISMVTP 124
N + + HL LT L+L +N L+ + L +LQ LRL +N DI M T
Sbjct: 158 GNNLEYIPEGVFDHLVGLTKLNLGNNGFTHLSPRVFQHLGNLQVLRLYENRLSDIPMGTF 217
Query: 125 DVIGD 129
D +G+
Sbjct: 218 DALGN 222
Score = 127 (49.8 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 33/117 (28%), Positives = 60/117 (51%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
+S+L L + N+ +++ GA L L LS +N++ L F+ ++ L L L++N
Sbjct: 76 ISALIALKMEKNELANIMPGAFRNLGSLRHLSLANNKLKNLPVRLFQDVNNLETLLLSNN 135
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDV 126
++V + A + SNL L L N L + + + L L +L L +N + ++P V
Sbjct: 136 QLVQIQPAQFSQFSNLKELQLYGNNLEYIPEGVFDHLVGLTKLNLGNNGFTHLSPRV 192
Score = 125 (49.1 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 36/118 (30%), Positives = 56/118 (47%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
+ L +L+VL + N+ S + G L L L+ NQI L F L L L+
Sbjct: 194 QHLGNLQVLRLYENRLSDIPMGTFDALGNLQELALQENQIGTLSPGLFHNNRNLQRLYLS 253
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
+N I + L +L L L N L+ L+ + P+ +L+EL L +N I+ + PD
Sbjct: 254 NNHISHLPPGIFMQLPHLNKLTLFGNSLKELSPGVFGPMPNLRELWLYNNHITSL-PD 310
Score = 122 (48.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 37/131 (28%), Positives = 64/131 (48%)
Query: 9 RLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 68
+L L L++ N + G + L L ++N I L D++F L+ L L L+H
Sbjct: 267 QLPHLNKLTLFGNSLKELSPGVFGPMPNLRELWLYNNHITSLPDNAFSHLNQLQVLILSH 326
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
N++ +S + L+NL L L N L+ L ++ L +L+ + L +N + + P I
Sbjct: 327 NQLSYISPGAFNGLTNLRELSLHTNALQDLDGNVFRSLANLRNVSLQNNRLRQL-PGSIF 385
Query: 129 DNVT-ITTLTL 138
NV + T+ L
Sbjct: 386 ANVNGLMTIQL 396
Score = 121 (47.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 29/110 (26%), Positives = 55/110 (50%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
+ +L+ L + +N +S+ A + L++L L HNQ+ + +F L+ L L L N
Sbjct: 292 MPNLRELWLYNNHITSLPDNAFSHLNQLQVLILSHNQLSYISPGAFNGLTNLRELSLHTN 351
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
+ + G L+NL + L +N LR L + + L ++L +N++
Sbjct: 352 ALQDLDGNVFRSLANLRNVSLQNNRLRQLPGSIFANVNGLMTIQLQNNNL 401
Score = 121 (47.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 39/132 (29%), Positives = 57/132 (43%)
Query: 9 RLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 68
+ S+LK L + N + G L LT L+ +N L F+ L L L L
Sbjct: 147 QFSNLKELQLYGNNLEYIPEGVFDHLVGLTKLNLGNNGFTHLSPRVFQHLGNLQVLRLYE 206
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
NR+ + + L NL L L N + L+ L ++LQ L L +N IS + P +
Sbjct: 207 NRLSDIPMGTFDALGNLQELALQENQIGTLSPGLFHNNRNLQRLYLSNNHISHLPPGIFM 266
Query: 129 DNVTITTLTLSG 140
+ LTL G
Sbjct: 267 QLPHLNKLTLFG 278
Score = 114 (45.2 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 32/123 (26%), Positives = 58/123 (47%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
L I + + + + L +L N++ + +FR L +L HL LA+N++ +
Sbjct: 58 LQILNTHITELPEDKFLNISALIALKMEKNELANIMPGAFRNLGSLRHLSLANNKLKNLP 117
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITT 135
++NL TL LS+N L + + +L+EL+L N++ + V V +T
Sbjct: 118 VRLFQDVNNLETLLLSNNQLVQIQPAQFSQFSNLKELQLYGNNLEYIPEGVFDHLVGLTK 177
Query: 136 LTL 138
L L
Sbjct: 178 LNL 180
Score = 110 (43.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 33/127 (25%), Positives = 58/127 (45%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
+L+ L +++N S + G L L L+ N + L F + L L L +N I
Sbjct: 246 NLQRLYLSNNHISHLPPGIFMQLPHLNKLTLFGNSLKELSPGVFGPMPNLRELWLYNNHI 305
Query: 72 VAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNV 131
++ + +HL+ L L LSHN L ++ L +L+EL L N + + +V
Sbjct: 306 TSLPDNAFSHLNQLQVLILSHNQLSYISPGAFNGLTNLRELSLHTNALQDLDGNVFRSLA 365
Query: 132 TITTLTL 138
+ ++L
Sbjct: 366 NLRNVSL 372
Score = 108 (43.1 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 35/129 (27%), Positives = 56/129 (43%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L L++ +N F+ + L L L + N++ + +F AL L L L N
Sbjct: 172 LVGLTKLNLGNNGFTHLSPRVFQHLGNLQVLRLYENRLSDIPMGTFDALGNLQELALQEN 231
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+I +S + NL L LS+N + L + L L +L L N + ++P V G
Sbjct: 232 QIGTLSPGLFHNNRNLQRLYLSNNHISHLPPGIFMQLPHLNKLTLFGNSLKELSPGVFGP 291
Query: 130 NVTITTLTL 138
+ L L
Sbjct: 292 MPNLRELWL 300
Score = 108 (43.1 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 35/133 (26%), Positives = 56/133 (42%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T L +L+ L++ NQ ++ G L L +N I L F L L+ L
Sbjct: 216 TFDALGNLQELALQENQIGTLSPGLFHNNRNLQRLYLSNNHISHLPPGIFMQLPHLNKLT 275
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
L N + +S + NL L L +N + +L + + L LQ L L N +S ++P
Sbjct: 276 LFGNSLKELSPGVFGPMPNLRELWLYNNHITSLPDNAFSHLNQLQVLILSHNQLSYISPG 335
Query: 126 VIGDNVTITTLTL 138
+ L+L
Sbjct: 336 AFNGLTNLRELSL 348
>MGI|MGI:2389180 [details] [associations]
symbol:Lrrtm4 "leucine rich repeat transmembrane neuronal 4"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=ISS] [GO:0030054 "cell junction" evidence=IEA]
[GO:0032281 "alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic
acid selective glutamate receptor complex" evidence=IDA]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0050808 "synapse organization"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
MGI:MGI:2389180 GO:GO:0030054 GO:GO:0045211 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GO:GO:0032281 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00700000104056 HOGENOM:HOG000290681
HOVERGEN:HBG052362 CTD:80059 EMBL:AY182031 EMBL:BC037216
EMBL:AK032470 IPI:IPI00170371 IPI:IPI00269563 RefSeq:NP_848846.3
UniGene:Mm.473274 UniGene:Mm.483425 ProteinModelPortal:Q80XG9
SMR:Q80XG9 STRING:Q80XG9 PRIDE:Q80XG9 Ensembl:ENSMUST00000074662
Ensembl:ENSMUST00000126005 Ensembl:ENSMUST00000126399
Ensembl:ENSMUST00000133918 Ensembl:ENSMUST00000147663 GeneID:243499
KEGG:mmu:243499 UCSC:uc009ckf.2 UCSC:uc012enp.1 InParanoid:Q80XG9
NextBio:385801 Bgee:Q80XG9 CleanEx:MM_LRRTM4 Genevestigator:Q80XG9
GermOnline:ENSMUSG00000052581 Uniprot:Q80XG9
Length = 590
Score = 175 (66.7 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 45/129 (34%), Positives = 69/129 (53%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
+L L + +N+ S+ R A AGL KL L HNQ + F L L + L NRI
Sbjct: 182 NLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRI 241
Query: 72 VAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNV 131
+VS S+L TLDLS N ++A+ L +LQ+L LD N ++ V+ + + +
Sbjct: 242 RSVSQGLTWTWSSLHTLDLSGNDIQAIEPGTFKCLPNLQKLNLDSNKLTNVSQETVNAWI 301
Query: 132 TITTLTLSG 140
++ ++TLSG
Sbjct: 302 SLISITLSG 310
Score = 133 (51.9 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 34/114 (29%), Positives = 55/114 (48%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
LS+ N ++ AGL++L L HN I +++ +F+ + L L L+ N+I +
Sbjct: 66 LSLRFNSIQKLKSNQFAGLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITYLH 125
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+ + NL LDLS+N L+ L + L+ L L L N + V V D
Sbjct: 126 NKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRVFQD 179
Score = 119 (46.9 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 31/110 (28%), Positives = 52/110 (47%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
LK L ++ N+ + + + L +L +N++ L+ F+ L L L L N +
Sbjct: 111 LKELILSSNKITYLHNKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLK 170
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
V NL LDL +N LR+L+++ L L+EL L+ N S +
Sbjct: 171 TVPIRVFQDCRNLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKI 220
Score = 117 (46.2 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 33/115 (28%), Positives = 51/115 (44%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L +L + N +V L L +N++ L ++F L L L L HN
Sbjct: 156 LRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHN 215
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTP 124
+ ++ A L NL ++ L N +R+++Q L SL L L NDI + P
Sbjct: 216 QFSKINFAHFPRLFNLRSIYLQWNRIRSVSQGLTWTWSSLHTLDLSGNDIQAIEP 270
Score = 115 (45.5 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 36/135 (26%), Positives = 62/135 (45%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T + +L+ L +++N+ +++ GL KL L N + + F+ L LD
Sbjct: 128 TFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLD 187
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
L +NR+ ++S + A L L L L HN + L +L+ + L N I V+
Sbjct: 188 LGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRSVSQG 247
Query: 126 VIGDNVTITTLTLSG 140
+ ++ TL LSG
Sbjct: 248 LTWTWSSLHTLDLSG 262
Score = 111 (44.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 33/129 (25%), Positives = 58/129 (44%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L+ L L + HN SSV A G+ +L L N+I L + +F + L +LDL++N
Sbjct: 84 LNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITYLHNKTFHPVPNLRNLDLSYN 143
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
++ + L L L L N L+ + + ++L L L N + ++ +
Sbjct: 144 KLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGYNRLRSLSRNAFAG 203
Query: 130 NVTITTLTL 138
+ + L L
Sbjct: 204 LLKLKELHL 212
Score = 109 (43.4 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 34/108 (31%), Positives = 49/108 (45%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L LK L + HNQFS + L L S+ N+I + S+L LDL+ N
Sbjct: 204 LLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRSVSQGLTWTWSSLHTLDLSGN 263
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
I A+ + L NL L+L N L ++Q+ + SL + L N
Sbjct: 264 DIQAIEPGTFKCLPNLQKLNLDSNKLTNVSQETVNAWISLISITLSGN 311
>RGD|1560707 [details] [associations]
symbol:Lrrtm4 "leucine rich repeat transmembrane neuronal 4"
species:10116 "Rattus norvegicus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISO] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0050808 "synapse organization"
evidence=IDA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
RGD:1560707 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0050808
InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290681
HOVERGEN:HBG052362 CTD:80059 EMBL:BC168219 IPI:IPI00388758
RefSeq:NP_001128218.1 UniGene:Rn.140910 GeneID:500219
KEGG:rno:500219 OrthoDB:EOG4MW85Z NextBio:705440
Genevestigator:B4F7C5 Uniprot:B4F7C5
Length = 590
Score = 175 (66.7 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 45/129 (34%), Positives = 69/129 (53%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
+L L + +N+ S+ R A AGL KL L HNQ + F L L + L NRI
Sbjct: 182 NLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRI 241
Query: 72 VAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNV 131
+VS S+L TLDLS N ++A+ L +LQ+L LD N ++ V+ + + +
Sbjct: 242 RSVSQGLTWTWSSLHTLDLSGNDIQAIEPGTFKCLPNLQKLNLDSNKLTNVSQETVNAWI 301
Query: 132 TITTLTLSG 140
++ ++TLSG
Sbjct: 302 SLISITLSG 310
Score = 133 (51.9 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 34/114 (29%), Positives = 55/114 (48%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
LS+ N ++ AGL++L L HN I +++ +F+ + L L L+ N+I +
Sbjct: 66 LSLRFNSIQKLKSNQFAGLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITYLH 125
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+ + NL LDLS+N L+ L + L+ L L L N + V V D
Sbjct: 126 NKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRVFQD 179
Score = 119 (46.9 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 31/110 (28%), Positives = 52/110 (47%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
LK L ++ N+ + + + L +L +N++ L+ F+ L L L L N +
Sbjct: 111 LKELILSSNKITYLHNKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLK 170
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
V NL LDL +N LR+L+++ L L+EL L+ N S +
Sbjct: 171 TVPIRVFQDCRNLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKI 220
Score = 117 (46.2 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 33/115 (28%), Positives = 51/115 (44%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L +L + N +V L L +N++ L ++F L L L L HN
Sbjct: 156 LRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHN 215
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTP 124
+ ++ A L NL ++ L N +R+++Q L SL L L NDI + P
Sbjct: 216 QFSKINFAHFPRLFNLRSIYLQWNRIRSVSQGLTWTWSSLHTLDLSGNDIQAIEP 270
Score = 115 (45.5 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 36/135 (26%), Positives = 62/135 (45%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T + +L+ L +++N+ +++ GL KL L N + + F+ L LD
Sbjct: 128 TFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLD 187
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
L +NR+ ++S + A L L L L HN + L +L+ + L N I V+
Sbjct: 188 LGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRSVSQG 247
Query: 126 VIGDNVTITTLTLSG 140
+ ++ TL LSG
Sbjct: 248 LTWTWSSLHTLDLSG 262
Score = 111 (44.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 33/129 (25%), Positives = 58/129 (44%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L+ L L + HN SSV A G+ +L L N+I L + +F + L +LDL++N
Sbjct: 84 LNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITYLHNKTFHPVPNLRNLDLSYN 143
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
++ + L L L L N L+ + + ++L L L N + ++ +
Sbjct: 144 KLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGYNRLRSLSRNAFAG 203
Query: 130 NVTITTLTL 138
+ + L L
Sbjct: 204 LLKLKELHL 212
Score = 109 (43.4 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 34/108 (31%), Positives = 49/108 (45%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L LK L + HNQFS + L L S+ N+I + S+L LDL+ N
Sbjct: 204 LLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRSVSQGLTWTWSSLHTLDLSGN 263
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
I A+ + L NL L+L N L ++Q+ + SL + L N
Sbjct: 264 DIQAIEPGTFKCLPNLQKLNLDSNKLTNVSQETVNAWISLISITLSGN 311
>UNIPROTKB|C9JEE2 [details] [associations]
symbol:LRRTM1 "Leucine-rich repeat transmembrane neuronal
protein 1" species:9606 "Homo sapiens" [GO:0007610 "behavior"
evidence=IEA] [GO:0035418 "protein localization to synapse"
evidence=IEA] [GO:0050808 "synapse organization" evidence=IEA]
[GO:0060076 "excitatory synapse" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0007610 InterPro:IPR003591 SMART:SM00369
GO:GO:0050808 InterPro:IPR000372 SMART:SM00013 GO:GO:0035418
EMBL:AC016670 HGNC:HGNC:19408 IPI:IPI00916020
ProteinModelPortal:C9JEE2 SMR:C9JEE2 STRING:C9JEE2
Ensembl:ENST00000416268 ArrayExpress:C9JEE2 Bgee:C9JEE2
Uniprot:C9JEE2
Length = 223
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 41/120 (34%), Positives = 62/120 (51%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
LS L LS+ +N S +R G GL +LT L HN I ++ +F+ L + L L+ N
Sbjct: 64 LSGLLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSN 123
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+I + + + NL ++DLS+N L+AL DL L+ L L + N I V + D
Sbjct: 124 QITQLPNTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQD 183
Score = 116 (45.9 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 36/130 (27%), Positives = 63/130 (48%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L L + HN SV+ A L ++ L+ NQI L + +FR + L +DL++N
Sbjct: 88 LMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLPNTTFRPMPNLRSVDLSYN 147
Query: 70 RIVAVSGASLAH-LSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
++ A++ L H L LTTL + N ++ + + +SL+ L + N + + +
Sbjct: 148 KLQALA-PDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFA 206
Query: 129 DNVTITTLTL 138
+T L L
Sbjct: 207 GLFKLTELHL 216
Score = 114 (45.2 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 31/103 (30%), Positives = 46/103 (44%)
Query: 34 LDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHN 93
L L LS +N + L F L L+ L L HN I +V G + L + L LS N
Sbjct: 64 LSGLLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSN 123
Query: 94 FLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTL 136
+ L P+ +L+ + L N + + PD+ +TTL
Sbjct: 124 QITQLPNTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTL 166
Score = 112 (44.5 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 27/90 (30%), Positives = 48/90 (53%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T R + +L+ + +++N+ ++ GL KLT+L N I + F+ +L LD
Sbjct: 132 TFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLD 191
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFL 95
+ +N++ +++ S A L LT L L HN L
Sbjct: 192 IGYNQLKSLARNSFAGLFKLTELHLEHNDL 221
Score = 110 (43.8 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 29/112 (25%), Positives = 53/112 (47%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
++L +K L+++ NQ + + + L S+ +N++ L F L L+ L +
Sbjct: 110 QKLRRVKELTLSSNQITQLPNTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMR 169
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
N I V +L LD+ +N L++L ++ L L EL L+ ND+
Sbjct: 170 ANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDL 221
>UNIPROTKB|C9JPM9 [details] [associations]
symbol:LRRTM1 "Leucine-rich repeat transmembrane neuronal
protein 1" species:9606 "Homo sapiens" [GO:0007610 "behavior"
evidence=IEA] [GO:0035418 "protein localization to synapse"
evidence=IEA] [GO:0050808 "synapse organization" evidence=IEA]
[GO:0060076 "excitatory synapse" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0007610 InterPro:IPR003591 SMART:SM00369
GO:GO:0050808 InterPro:IPR000372 SMART:SM00013 GO:GO:0035418
EMBL:AC016670 HGNC:HGNC:19408 IPI:IPI00917222
ProteinModelPortal:C9JPM9 SMR:C9JPM9 STRING:C9JPM9
Ensembl:ENST00000452811 HOGENOM:HOG000185833 ArrayExpress:C9JPM9
Bgee:C9JPM9 Uniprot:C9JPM9
Length = 183
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 41/120 (34%), Positives = 62/120 (51%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
LS L LS+ +N S +R G GL +LT L HN I ++ +F+ L + L L+ N
Sbjct: 64 LSGLLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSN 123
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+I + + + NL ++DLS+N L+AL DL L+ L L + N I V + D
Sbjct: 124 QITQLPNTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQD 183
Score = 114 (45.2 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 31/103 (30%), Positives = 46/103 (44%)
Query: 34 LDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHN 93
L L LS +N + L F L L+ L L HN I +V G + L + L LS N
Sbjct: 64 LSGLLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSN 123
Query: 94 FLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTL 136
+ L P+ +L+ + L N + + PD+ +TTL
Sbjct: 124 QITQLPNTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTL 166
>UNIPROTKB|F1NVW6 [details] [associations]
symbol:F1NVW6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000902 "cell morphogenesis" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007599 "hemostasis"
evidence=IEA] [GO:0031362 "anchored to external side of plasma
membrane" evidence=IEA] [GO:0042730 "fibrinolysis" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0042730 InterPro:IPR003591
SMART:SM00369 GO:GO:0007155 InterPro:IPR000372 SMART:SM00013
GO:GO:0031362 GeneTree:ENSGT00690000102197 EMBL:AADN02063514
EMBL:AADN02063515 IPI:IPI00571680 ProteinModelPortal:F1NVW6
Ensembl:ENSGALT00000035204 OMA:LTENPWH Uniprot:F1NVW6
Length = 225
Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 44/133 (33%), Positives = 72/133 (54%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
++L++L+ L ++ N +V A L L L HN ++ L + + L L+ L LA
Sbjct: 50 QKLAALQDLDLSDNGLQAVLTEA--ALPSLKELLLSHNALEALP--ALQGLPALTRLALA 105
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI 127
HN++ A++ A+ + L LDL N LR L +D L+ L++L L DN + + ++
Sbjct: 106 HNKLQALAPAAFRAVPQLQDLDLRGNALRTLPEDAFMGLRVLKDLDLSDNALEELPRGLL 165
Query: 128 GDNVTITTLTLSG 140
D VT+ TL LSG
Sbjct: 166 QDLVTLETLWLSG 178
Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 41/112 (36%), Positives = 57/112 (50%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T L SLK L ++HN ++ AL GL LT L+ HN++ L +FRA+ L LD
Sbjct: 70 TEAALPSLKELLLSHNALEALP--ALQGLPALTRLALAHNKLQALAPAAFRAVPQLQDLD 127
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
L N + + + L L LDLS N L L + L+ L +L+ L L N
Sbjct: 128 LRGNALRTLPEDAFMGLRVLKDLDLSDNALEELPRGLLQDLVTLETLWLSGN 179
Score = 110 (43.8 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 30/89 (33%), Positives = 44/89 (49%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L +L L++AHN+ ++ A + +L L N + L + +F L L LDL+ N
Sbjct: 96 LPALTRLALAHNKLQALAPAAFRAVPQLQDLDLRGNALRTLPEDAFMGLRVLKDLDLSDN 155
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRAL 98
+ + L L L TL LS N LRAL
Sbjct: 156 ALEELPRGLLQDLVTLETLWLSGNRLRAL 184
>UNIPROTKB|P35858 [details] [associations]
symbol:IGFALS "Insulin-like growth factor-binding protein
complex acid labile subunit" species:9606 "Homo sapiens"
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005576 "extracellular
region" evidence=NAS;TAS] [GO:0005520 "insulin-like growth factor
binding" evidence=TAS] [GO:0007165 "signal transduction"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005634 Reactome:REACT_116125 GO:GO:0007165
GO:GO:0005615 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 EMBL:M86826 EMBL:AF192554
EMBL:AK303146 EMBL:AC012180 EMBL:AL031724 IPI:IPI00020996
IPI:IPI00925635 PIR:A41915 RefSeq:NP_001139478.1 RefSeq:NP_004961.1
UniGene:Hs.839 ProteinModelPortal:P35858 SMR:P35858 STRING:P35858
DMDM:543800 PaxDb:P35858 PeptideAtlas:P35858 PRIDE:P35858
DNASU:3483 Ensembl:ENST00000215539 Ensembl:ENST00000415638
GeneID:3483 KEGG:hsa:3483 UCSC:uc002cmy.3 CTD:3483
GeneCards:GC16M001840 HGNC:HGNC:5468 HPA:HPA040692 HPA:HPA040948
MIM:601489 neXtProt:NX_P35858 Orphanet:140941 PharmGKB:PA29702
HOGENOM:HOG000033909 HOVERGEN:HBG000327 InParanoid:P35858
OMA:HLDRGCL OrthoDB:EOG4FFD1R PhylomeDB:P35858 GenomeRNAi:3483
NextBio:13696 ArrayExpress:P35858 Bgee:P35858 CleanEx:HS_IGFALS
Genevestigator:P35858 GermOnline:ENSG00000099769 GO:GO:0005520
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 Uniprot:P35858
Length = 605
Score = 172 (65.6 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 44/119 (36%), Positives = 63/119 (52%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T +L L +++N+ S + G GL L L+ N + VL D +FR L +L L
Sbjct: 141 TFAHTPALASLGLSNNRLSRLEDGLFEGLGSLWDLNLGWNSLAVLPDAAFRGLGSLRELV 200
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTP 124
LA NR+ + A + L+ L LDLS N LRA+ ++ L LQ+L LD N I+ V P
Sbjct: 201 LAGNRLAYLQPALFSGLAELRELDLSRNALRAIKANVFVQLPRLQKLYLDRNLIAAVAP 259
Score = 153 (58.9 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 37/115 (32%), Positives = 57/115 (49%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L+VL ++HN +S+R L L L HN+I L + SF L L L L HN
Sbjct: 289 LLGLRVLRLSHNAIASLRPRTFKDLHFLEELQLGHNRIRQLAERSFEGLGQLEVLTLDHN 348
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTP 124
++ V + L+N+ ++LS N LR L + + L L L L+ + + + P
Sbjct: 349 QLQEVKAGAFLGLTNVAVMNLSGNCLRNLPEQVFRGLGKLHSLHLEGSCLGRIRP 403
Score = 151 (58.2 bits), Expect = 8.8e-10, P = 8.8e-10
Identities = 41/123 (33%), Positives = 58/123 (47%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T LS L+ L + N + +L GL +L L NQ+ L F+ L L +L
Sbjct: 405 TFTGLSGLRRLFLKDNGLVGIEEQSLWGLAELLELDLTSNQLTHLPHRLFQGLGKLEYLL 464
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
L+ NR+ + +L L LD+SHN L AL L+ PL L+ L L +N + TP
Sbjct: 465 LSRNRLAELPADALGPLQRAFWLDVSHNRLEALPNSLLAPLGRLRYLSLRNNSLRTFTPQ 524
Query: 126 VIG 128
G
Sbjct: 525 PPG 527
Score = 142 (55.0 bits), Expect = 8.2e-09, P = 8.2e-09
Identities = 40/122 (32%), Positives = 59/122 (48%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
R L SL+ L +A N+ + ++ +GL +L L N + ++ + F L L L L
Sbjct: 191 RGLGSLRELVLAGNRLAYLQPALFSGLAELRELDLSRNALRAIKANVFVQLPRLQKLYLD 250
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI 127
N I AV+ + L L LDLSHN + L +D L L+ LRL N I+ + P
Sbjct: 251 RNLIAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHNAIASLRPRTF 310
Query: 128 GD 129
D
Sbjct: 311 KD 312
Score = 137 (53.3 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 40/132 (30%), Positives = 59/132 (44%)
Query: 9 RLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 68
+L L+ L + N ++V GA GL L L HN++ L + +F L L L L+H
Sbjct: 240 QLPRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSH 299
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
N I ++ + L L L L HN +R L + L L+ L LD N + V
Sbjct: 300 NAIASLRPRTFKDLHFLEELQLGHNRIRQLAERSFEGLGQLEVLTLDHNQLQEVKAGAFL 359
Query: 129 DNVTITTLTLSG 140
+ + LSG
Sbjct: 360 GLTNVAVMNLSG 371
Score = 133 (51.9 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 45/149 (30%), Positives = 70/149 (46%)
Query: 1 MSIWCTVRRLSSL--------KVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLED 52
+S++C+ R L+ L + L + N SSV A L L L+ Q+ LE
Sbjct: 56 LSVFCSSRNLTRLPDGVPGGTQALWLDGNNLSSVPPAAFQNLSSLGFLNLQGGQLGSLEP 115
Query: 53 HSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQEL 112
+ L L HL L N++ +++ + AH L +L LS+N L L L L SL +L
Sbjct: 116 QALLGLENLCHLHLERNQLRSLALGTFAHTPALASLGLSNNRLSRLEDGLFEGLGSLWDL 175
Query: 113 RLDDNDISMVTPDVIGDNV-TITTLTLSG 140
L N ++ V PD + ++ L L+G
Sbjct: 176 NLGWNSLA-VLPDAAFRGLGSLRELVLAG 203
Score = 127 (49.8 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 33/110 (30%), Positives = 51/110 (46%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L+ L+ L ++ N +++ L +L L N I + +F L L LDL+HN
Sbjct: 217 LAELRELDLSRNALRAIKANVFVQLPRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHN 276
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
R+ + + L L L LSHN + +L L L+EL+L N I
Sbjct: 277 RVAGLLEDTFPGLLGLRVLRLSHNAIASLRPRTFKDLHFLEELQLGHNRI 326
Score = 126 (49.4 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 37/131 (28%), Positives = 57/131 (43%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L +L+ L ++HN+ + + GL L L HN I L +F+ L L L L HN
Sbjct: 265 LKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHNAIASLRPRTFKDLHFLEELQLGHN 324
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
RI ++ S L L L L HN L+ + L ++ + L N + + V
Sbjct: 325 RIRQLAERSFEGLGQLEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGNCLRNLPEQVFRG 384
Query: 130 NVTITTLTLSG 140
+ +L L G
Sbjct: 385 LGKLHSLHLEG 395
Score = 126 (49.4 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 40/132 (30%), Positives = 60/132 (45%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
+ LSSL L++ Q S+ AL GL+ L L NQ+ L +F L+ L L+
Sbjct: 95 QNLSSLGFLNLQGGQLGSLEPQALLGLENLCHLHLERNQLRSLALGTFAHTPALASLGLS 154
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI 127
+NR+ + L +L L+L N L L L SL+EL L N ++ + P +
Sbjct: 155 NNRLSRLEDGLFEGLGSLWDLNLGWNSLAVLPDAAFRGLGSLRELVLAGNRLAYLQPALF 214
Query: 128 GDNVTITTLTLS 139
+ L LS
Sbjct: 215 SGLAELRELDLS 226
Score = 124 (48.7 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 36/119 (30%), Positives = 58/119 (48%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L+++ V++++ N ++ GL KL SL + + + H+F LS L L L N
Sbjct: 361 LTNVAVMNLSGNCLRNLPEQVFRGLGKLHSLHLEGSCLGRIRPHTFTGLSGLRRLFLKDN 420
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
+V + SL L+ L LDL+ N L L L L L+ L L N ++ + D +G
Sbjct: 421 GLVGIEEQSLWGLAELLELDLTSNQLTHLPHRLFQGLGKLEYLLLSRNRLAELPADALG 479
Score = 123 (48.4 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 37/117 (31%), Positives = 55/117 (47%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L +L L + NQ S+ G A L SL +N++ LED F L +L L+L N
Sbjct: 121 LENLCHLHLERNQLRSLALGTFAHTPALASLGLSNNRLSRLEDGLFEGLGSLWDLNLGWN 180
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDV 126
+ + A+ L +L L L+ N L L L + L L+EL L N + + +V
Sbjct: 181 SLAVLPDAAFRGLGSLRELVLAGNRLAYLQPALFSGLAELRELDLSRNALRAIKANV 237
Score = 115 (45.5 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 33/111 (29%), Positives = 51/111 (45%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L+VL++ HNQ V+ GA GL + ++ N + L + FR L L L L +
Sbjct: 337 LGQLEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGNCLRNLPEQVFRGLGKLHSLHLEGS 396
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
+ + + LS L L L N L + + + L L EL L N ++
Sbjct: 397 CLGRIRPHTFTGLSGLRRLFLKDNGLVGIEEQSLWGLAELLELDLTSNQLT 447
Score = 114 (45.2 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 36/130 (27%), Positives = 56/130 (43%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L SL L++ N + + A GL L L N++ L+ F L+ L LDL+ N
Sbjct: 169 LGSLWDLNLGWNSLAVLPDAAFRGLGSLRELVLAGNRLAYLQPALFSGLAELRELDLSRN 228
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+ A+ L L L L N + A+ LK+L+ L L N ++ + D
Sbjct: 229 ALRAIKANVFVQLPRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPG 288
Query: 130 NVTITTLTLS 139
+ + L LS
Sbjct: 289 LLGLRVLRLS 298
Score = 103 (41.3 bits), Expect = 0.00013, P = 0.00013
Identities = 29/114 (25%), Positives = 54/114 (47%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T + L L+ L + HN+ + + GL +L L+ HNQ+ ++ +F L+ ++ ++
Sbjct: 309 TFKDLHFLEELQLGHNRIRQLAERSFEGLGQLEVLTLDHNQLQEVKAGAFLGLTNVAVMN 368
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
L+ N + + L L +L L + L + T L L+ L L DN +
Sbjct: 369 LSGNCLRNLPEQVFRGLGKLHSLHLEGSCLGRIRPHTFTGLSGLRRLFLKDNGL 422
>UNIPROTKB|F1NI07 [details] [associations]
symbol:IGFALS "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005634 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GeneTree:ENSGT00690000101816 OMA:FCGLGEL
EMBL:AADN02049426 IPI:IPI00576764 Ensembl:ENSGALT00000003657
Uniprot:F1NI07
Length = 604
Score = 171 (65.3 bits), Expect = 6.2e-12, P = 6.2e-12
Identities = 44/129 (34%), Positives = 64/129 (49%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
++ L L + H+ S +R + L L L HN I +ED SFR L L LDL HN
Sbjct: 380 VTKLHSLHLEHSCLSKIRANTFSSLTSLRRLFLQHNAISTIEDQSFRELHELLELDLKHN 439
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
R+ +S LSNL L LS N + ++Q+ +PL+ L L L N ++ + VI
Sbjct: 440 RLSHLSPQLFVGLSNLEYLFLSFNQIMDISQNTFSPLRRLFWLDLSHNQLATLDNAVITQ 499
Query: 130 NVTITTLTL 138
+ L+L
Sbjct: 500 LANLRYLSL 508
Score = 167 (63.8 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 44/135 (32%), Positives = 69/135 (51%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T L+SL+ L + HN S++ + L +L L HN++ L F LS L +L
Sbjct: 400 TFSSLTSLRRLFLQHNAISTIEDQSFRELHELLELDLKHNRLSHLSPQLFVGLSNLEYLF 459
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
L+ N+I+ +S + + L L LDLSHN L L +IT L +L+ L L +N + +
Sbjct: 460 LSFNQIMDISQNTFSPLRRLFWLDLSHNQLATLDNAVITQLANLRYLSLRNNSLETFSVG 519
Query: 126 VIGDNVTITTLTLSG 140
+ + T+ L L G
Sbjct: 520 FLCPSFTLEQLWLGG 534
Score = 158 (60.7 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 44/134 (32%), Positives = 65/134 (48%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T +L LS+ +N FS V G AGL L L+ N + VL D F L L L
Sbjct: 136 TFLHTQNLVSLSLNNNLFSKVEEGLFAGLSNLWYLNLGWNSLVVLPDKVFHDLPNLRELI 195
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
LA N++ + L+ L LDLS N L+ + ++ L+ LQ+L L++N I+ + P
Sbjct: 196 LAGNKLPYLQHQLFCSLTELKELDLSGNALKGIKINIFVKLQKLQKLYLNNNQINAIAPR 255
Query: 126 VIGDNVTITTLTLS 139
++ L LS
Sbjct: 256 AFMGMKSLRWLDLS 269
Score = 147 (56.8 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 42/149 (28%), Positives = 71/149 (47%)
Query: 1 MSIWCTVRRLSSL--------KVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLED 52
++++C+ R L+ L K + + N F+ + A L L L +Q+ +E
Sbjct: 51 LNVFCSGRNLTQLPDDFPTNAKAIWLDGNNFTQLPAAAFRNLSGLDFLDLQSSQLAAVEQ 110
Query: 53 HSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQEL 112
H+F L +L HL L NR+ ++ + H NL +L L++N + + L L +L L
Sbjct: 111 HAFHGLRSLYHLHLERNRLKYLAPHTFLHTQNLVSLSLNNNLFSKVEEGLFAGLSNLWYL 170
Query: 113 RLDDNDISMVTPD-VIGDNVTITTLTLSG 140
L N + +V PD V D + L L+G
Sbjct: 171 NLGWNSL-VVLPDKVFHDLPNLRELILAG 198
Score = 140 (54.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 35/111 (31%), Positives = 54/111 (48%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
R L L L + HN+ S + GL L L NQI + ++F L L LDL+
Sbjct: 426 RELHELLELDLKHNRLSHLSPQLFVGLSNLEYLFLSFNQIMDISQNTFSPLRRLFWLDLS 485
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDND 118
HN++ + A + L+NL L L +N L + + P +L++L L N+
Sbjct: 486 HNQLATLDNAVITQLANLRYLSLRNNSLETFSVGFLCPSFTLEQLWLGGNN 536
Score = 139 (54.0 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 36/128 (28%), Positives = 60/128 (46%)
Query: 3 IWCTVRR----LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRAL 58
IW R L L+VLS+ +NQ ++ GA GL + + N I L ++ F +
Sbjct: 321 IWSLAERTFDGLGQLEVLSLNNNQLQDIKAGAFLGLYNVAVMHLSANCIKTLPEYVFEGV 380
Query: 59 STLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDND 118
+ L L L H+ + + + + L++L L L HN + + L L EL L N
Sbjct: 381 TKLHSLHLEHSCLSKIRANTFSSLTSLRRLFLQHNAISTIEDQSFRELHELLELDLKHNR 440
Query: 119 ISMVTPDV 126
+S ++P +
Sbjct: 441 LSHLSPQL 448
Score = 137 (53.3 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 34/110 (30%), Positives = 57/110 (51%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L+ LK L ++ N ++ L KL L ++NQI+ + +F + +L LDL+HN
Sbjct: 212 LTELKELDLSGNALKGIKINIFVKLQKLQKLYLNNNQINAIAPRAFMGMKSLRWLDLSHN 271
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
R+ ++ + L +L L LS N + +L L+ L+EL+L N I
Sbjct: 272 RLTSLYEDTFLGLLSLHVLRLSTNSITSLRPRTFKDLQFLEELQLGHNRI 321
Score = 132 (51.5 bits), Expect = 9.7e-08, P = 9.7e-08
Identities = 37/130 (28%), Positives = 61/130 (46%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L ++ V+ ++ N ++ G+ KL SL H+ + + ++F +L++L L L HN
Sbjct: 356 LYNVAVMHLSANCIKTLPEYVFEGVTKLHSLHLEHSCLSKIRANTFSSLTSLRRLFLQHN 415
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
I + S L L LDL HN L L+ L L +L+ L L N I ++ +
Sbjct: 416 AISTIEDQSFRELHELLELDLKHNRLSHLSPQLFVGLSNLEYLFLSFNQIMDISQNTFSP 475
Query: 130 NVTITTLTLS 139
+ L LS
Sbjct: 476 LRRLFWLDLS 485
Score = 131 (51.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 37/120 (30%), Positives = 59/120 (49%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L +L+ L +A N+ ++ L +L L N + ++ + F L L L L +N
Sbjct: 188 LPNLRELILAGNKLPYLQHQLFCSLTELKELDLSGNALKGIKINIFVKLQKLQKLYLNNN 247
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+I A++ + + +L LDLSHN L +L +D L SL LRL N I+ + P D
Sbjct: 248 QINAIAPRAFMGMKSLRWLDLSHNRLTSLYEDTFLGLLSLHVLRLSTNSITSLRPRTFKD 307
Score = 129 (50.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 41/133 (30%), Positives = 58/133 (43%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
R LS L L + +Q ++V + A GL L L N++ L H+F L L L
Sbjct: 90 RNLSGLDFLDLQSSQLAAVEQHAFHGLRSLYHLHLERNRLKYLAPHTFLHTQNLVSLSLN 149
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI 127
+N V A LSNL L+L N L L + L +L+EL L N + + +
Sbjct: 150 NNLFSKVEEGLFAGLSNLWYLNLGWNSLVVLPDKVFHDLPNLRELILAGNKLPYLQHQLF 209
Query: 128 GDNVTITTLTLSG 140
+ L LSG
Sbjct: 210 CSLTELKELDLSG 222
Score = 126 (49.4 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 35/123 (28%), Positives = 59/123 (47%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
+ SL+ L ++HN+ +S+ GL L L N I L +F+ L L L L HN
Sbjct: 260 MKSLRWLDLSHNRLTSLYEDTFLGLLSLHVLRLSTNSITSLRPRTFKDLQFLEELQLGHN 319
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
RI +++ + L L L L++N L+ + L ++ + L N I + P+ + +
Sbjct: 320 RIWSLAERTFDGLGQLEVLSLNNNQLQDIKAGAFLGLYNVAVMHLSANCIKTL-PEYVFE 378
Query: 130 NVT 132
VT
Sbjct: 379 GVT 381
Score = 119 (46.9 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 33/129 (25%), Positives = 59/129 (45%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L SL VL ++ N +S+R L L L HN+I L + +F L L L L +N
Sbjct: 284 LLSLHVLRLSTNSITSLRPRTFKDLQFLEELQLGHNRIWSLAERTFDGLGQLEVLSLNNN 343
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
++ + + L N+ + LS N ++ L + + + L L L+ + +S + +
Sbjct: 344 QLQDIKAGAFLGLYNVAVMHLSANCIKTLPEYVFEGVTKLHSLHLEHSCLSKIRANTFSS 403
Query: 130 NVTITTLTL 138
++ L L
Sbjct: 404 LTSLRRLFL 412
Score = 116 (45.9 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 31/111 (27%), Positives = 55/111 (49%)
Query: 9 RLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 68
+L L+ L + +NQ +++ A G+ L L HN++ L + +F L +L L L+
Sbjct: 235 KLQKLQKLYLNNNQINAIAPRAFMGMKSLRWLDLSHNRLTSLYEDTFLGLLSLHVLRLST 294
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
N I ++ + L L L L HN + +L + L L+ L L++N +
Sbjct: 295 NSITSLRPRTFKDLQFLEELQLGHNRIWSLAERTFDGLGQLEVLSLNNNQL 345
Score = 113 (44.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 32/117 (27%), Positives = 58/117 (49%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T + L L+ L + HN+ S+ GL +L LS ++NQ+ ++ +F L ++ +
Sbjct: 304 TFKDLQFLEELQLGHNRIWSLAERTFDGLGQLEVLSLNNNQLQDIKAGAFLGLYNVAVMH 363
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
L+ N I + ++ L +L L H+ L + + + L SL+ L L N IS +
Sbjct: 364 LSANCIKTLPEYVFEGVTKLHSLHLEHSCLSKIRANTFSSLTSLRRLFLQHNAISTI 420
Score = 104 (41.7 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 34/108 (31%), Positives = 47/108 (43%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L SL L + N+ + L SLS ++N +E+ F LS L +L+L N
Sbjct: 116 LRSLYHLHLERNRLKYLAPHTFLHTQNLVSLSLNNNLFSKVEEGLFAGLSNLWYLNLGWN 175
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
+V + L NL L L+ N L L L L L+EL L N
Sbjct: 176 SLVVLPDKVFHDLPNLRELILAGNKLPYLQHQLFCSLTELKELDLSGN 223
>ZFIN|ZDB-GENE-040310-1 [details] [associations]
symbol:rtn4r "reticulon 4 receptor" species:7955
"Danio rerio" [GO:0048936 "peripheral nervous system neuron
axonogenesis" evidence=IGI;IMP] [GO:0007411 "axon guidance"
evidence=IGI;IMP] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-040310-1 GO:GO:0007411 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 GO:GO:0048936 HOGENOM:HOG000116109 HOVERGEN:HBG063707
CTD:65078 EMBL:AY257178 IPI:IPI00490487 RefSeq:NP_982345.1
UniGene:Dr.30202 ProteinModelPortal:Q6X3Y5 SMR:Q6X3Y5 GeneID:403306
KEGG:dre:403306 InParanoid:Q6X3Y5 NextBio:20816915 Uniprot:Q6X3Y5
Length = 479
Score = 169 (64.5 bits), Expect = 6.8e-12, P = 6.8e-12
Identities = 46/110 (41%), Positives = 57/110 (51%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
R L SL+ L + N ++ L LT L H+N+I V+ DH R L L L L
Sbjct: 151 RGLFSLQYLYLQDNNLLALHEDTFLDLANLTYLFLHNNKIKVVTDHMLRGLVNLDRLLLH 210
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
NRIV V + LS LTTL L N L LT + + PL SLQ LRL+ N
Sbjct: 211 QNRIVHVQQQAFNDLSKLTTLFLFFNNLTMLTGESMNPLVSLQYLRLNGN 260
Score = 129 (50.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 41/130 (31%), Positives = 60/130 (46%)
Query: 10 LSSLKVLSIAHNQ-FSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 68
L L+ L I N + A GL KL +L H + L FR L +L +L L
Sbjct: 104 LERLEELDIGDNSNLRIISPTAFRGLTKLHTLHLHRCGLSELPVGVFRGLFSLQYLYLQD 163
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
N ++A+ + L+NLT L L +N ++ +T ++ L +L L L N I V
Sbjct: 164 NNLLALHEDTFLDLANLTYLFLHNNKIKVVTDHMLRGLVNLDRLLLHQNRIVHVQQQAFN 223
Query: 129 DNVTITTLTL 138
D +TTL L
Sbjct: 224 DLSKLTTLFL 233
Score = 117 (46.2 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 39/133 (29%), Positives = 62/133 (46%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
R L+ L L + S + G GL L L N + L + +F L+ L++L L
Sbjct: 127 RGLTKLHTLHLHRCGLSELPVGVFRGLFSLQYLYLQDNNLLALHEDTFLDLANLTYLFLH 186
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI 127
+N+I V+ L L NL L L N + + Q L L L L N+++M+T + +
Sbjct: 187 NNKIKVVTDHMLRGLVNLDRLLLHQNRIVHVQQQAFNDLSKLTTLFLFFNNLTMLTGESM 246
Query: 128 GDNVTITTLTLSG 140
V++ L L+G
Sbjct: 247 NPLVSLQYLRLNG 259
Score = 109 (43.4 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 36/119 (30%), Positives = 54/119 (45%)
Query: 21 NQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN-RIVAVSGASL 79
N+ + VR + + + LT L + N I +E +F L L LD+ N + +S +
Sbjct: 67 NKLTVVRSTSFSSVHNLTVLWMYSNNISHIEAGAFYGLERLEELDIGDNSNLRIISPTAF 126
Query: 80 AHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTLTL 138
L+ L TL L L L + L SLQ L L DN++ + D D +T L L
Sbjct: 127 RGLTKLHTLHLHRCGLSELPVGVFRGLFSLQYLYLQDNNLLALHEDTFLDLANLTYLFL 185
Score = 109 (43.4 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 38/128 (29%), Positives = 58/128 (45%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQ-IDVLEDHSFRALSTLSHLDLAHNR 70
+L VL + N S + GA GL++L L N + ++ +FR L+ L L L
Sbjct: 82 NLTVLWMYSNNISHIEAGAFYGLERLEELDIGDNSNLRIISPTAFRGLTKLHTLHLHRCG 141
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDN 130
+ + L +L L L N L AL +D L +L L L +N I +VT ++
Sbjct: 142 LSELPVGVFRGLFSLQYLYLQDNNLLALHEDTFLDLANLTYLFLHNNKIKVVTDHMLRGL 201
Query: 131 VTITTLTL 138
V + L L
Sbjct: 202 VNLDRLLL 209
>UNIPROTKB|J9NZ68 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 Pfam:PF00054 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF12661 Pfam:PF01463
GeneTree:ENSGT00700000104083 EMBL:AAEX03002614 EMBL:AAEX03002615
EMBL:AAEX03002616 Ensembl:ENSCAFT00000044488 Uniprot:J9NZ68
Length = 1337
Score = 118 (46.6 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 32/105 (30%), Positives = 52/105 (49%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
L+ + +++NQ S + A GL L SL + N+I L F L +L L L N+I
Sbjct: 133 LRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKIN 192
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
+ + L NL L L N L+ + + +PL+++Q + L N
Sbjct: 193 CLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQN 237
Score = 117 (46.2 bits), Expect = 7.8e-12, Sum P(2) = 7.8e-12
Identities = 29/78 (37%), Positives = 45/78 (57%)
Query: 61 LSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
L+ +DL++NRI +S S ++++ L TL LS+N LR + LKSL+ L L NDIS
Sbjct: 586 LTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDIS 645
Query: 121 MVTPDVIGDNVTITTLTL 138
+V D ++ L +
Sbjct: 646 VVPEGAFSDLSALSHLAI 663
Score = 111 (44.1 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 32/124 (25%), Positives = 60/124 (48%)
Query: 16 LSIAHNQFSSVRR-GALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAV 74
L + +N+F+ + G L +L ++ +N+I +E+ +F + ++ + L NR+ V
Sbjct: 345 LRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGAAGVNEILLTSNRLENV 404
Query: 75 SGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTIT 134
L +L TL L N + + D L S++ L L DN I+ + P +++
Sbjct: 405 QHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQIATIAPGAFDTLHSLS 464
Query: 135 TLTL 138
TL L
Sbjct: 465 TLNL 468
Score = 108 (43.1 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 27/107 (25%), Positives = 50/107 (46%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
++L L+ ++ ++N+ + + GA G + + N+++ ++ F+ L +L L L
Sbjct: 362 KKLPQLRKINFSNNKITDIEEGAFEGAAGVNEILLTSNRLENVQHKMFKGLESLKTLMLR 421
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRL 114
NRI V S LS++ L L N + + L SL L L
Sbjct: 422 SNRISCVGNDSFIGLSSVRLLSLYDNQIATIAPGAFDTLHSLSTLNL 468
Score = 85 (35.0 bits), Expect = 7.8e-12, Sum P(2) = 7.8e-12
Identities = 22/60 (36%), Positives = 31/60 (51%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L SLK L + N+ S V + GL + LS + NQI + +F L +LS L+L N
Sbjct: 412 LESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQIATIAPGAFDTLHSLSTLNLLAN 471
>ZFIN|ZDB-GENE-080327-8 [details] [associations]
symbol:lrrtm2 "leucine rich repeat transmembrane
neuronal 2" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IDA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-080327-8 InterPro:IPR003591 SMART:SM00369
GO:GO:0042802 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GeneTree:ENSGT00700000104056 EMBL:CR381529 EMBL:CU681852
IPI:IPI00866135 Ensembl:ENSDART00000105477
Ensembl:ENSDART00000130532 Uniprot:F1Q8H9
Length = 543
Score = 169 (64.5 bits), Expect = 8.5e-12, P = 8.5e-12
Identities = 41/109 (37%), Positives = 56/109 (51%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
LS+ HN S + G +LT L HNQI + + +F+ L L L+L+ NRI +
Sbjct: 67 LSLRHNSISELSSDQFFGFTQLTWLHLDHNQITTVHEDAFQGLYKLKDLNLSSNRITKLP 126
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTP 124
+ HL NL LDLS N + AL +L L+ LQ L L N + TP
Sbjct: 127 NTTFIHLINLQILDLSFNQMTALEPELFHGLRKLQILHLRSNSLR-TTP 174
Score = 131 (51.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 36/109 (33%), Positives = 55/109 (50%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
SL+ L +++N+ S+ R AGL KL L HN + + F L L L L N+I
Sbjct: 183 SLEYLGLSNNRLRSLARNGFAGLIKLRELHLEHNHLTKINLAHFPRLVALQFLYLQWNKI 242
Query: 72 VAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
++ + L LDL+ N +R L ++ L SL+ L LD+N +S
Sbjct: 243 NNLTSTMEWKWTTLEKLDLTGNEIRVLIPEVFETLPSLKILLLDNNKLS 291
Score = 119 (46.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 38/135 (28%), Positives = 63/135 (46%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T L +L++L ++ NQ +++ GL KL L N + +F +L +L
Sbjct: 129 TFIHLINLQILDLSFNQMTALEPELFHGLRKLQILHLRSNSLRTTPVRAFWDCRSLEYLG 188
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
L++NR+ +++ A L L L L HN L + L +LQ L L N I+ +T
Sbjct: 189 LSNNRLRSLARNGFAGLIKLRELHLEHNHLTKINLAHFPRLVALQFLYLQWNKINNLTST 248
Query: 126 VIGDNVTITTLTLSG 140
+ T+ L L+G
Sbjct: 249 MEWKWTTLEKLDLTG 263
Score = 116 (45.9 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 35/107 (32%), Positives = 50/107 (46%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
+ L L + HNQ ++V A GL KL L+ N+I L + +F L L LDL+ N+
Sbjct: 86 TQLTWLHLDHNQITTVHEDAFQGLYKLKDLNLSSNRITKLPNTTFIHLINLQILDLSFNQ 145
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
+ A+ L L L L N LR +SL+ L L +N
Sbjct: 146 MTALEPELFHGLRKLQILHLRSNSLRTTPVRAFWDCRSLEYLGLSNN 192
Score = 102 (41.0 bits), Expect = 0.00028, P = 0.00028
Identities = 32/113 (28%), Positives = 51/113 (45%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L LK L+++ N+ + + L L L NQ+ LE F L L L L N
Sbjct: 109 LYKLKDLNLSSNRITKLPNTTFIHLINLQILDLSFNQMTALEPELFHGLRKLQILHLRSN 168
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
+ + +L L LS+N LR+L ++ L L+EL L+ N ++ +
Sbjct: 169 SLRTTPVRAFWDCRSLEYLGLSNNRLRSLARNGFAGLIKLRELHLEHNHLTKI 221
>MGI|MGI:2444277 [details] [associations]
symbol:Islr2 "immunoglobulin superfamily containing
leucine-rich repeat 2" species:10090 "Mus musculus" [GO:0005515
"protein binding" evidence=IPI] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0009986 "cell surface" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IMP] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:2444277 GO:GO:0016021 GO:GO:0005886
GO:GO:0009986 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0045773
InterPro:IPR000372 SMART:SM00013 HSSP:Q9BZR6 CTD:57611
eggNOG:NOG240332 HOGENOM:HOG000113108 HOVERGEN:HBG100863
OrthoDB:EOG4QC14W EMBL:EU497918 EMBL:AK129367 EMBL:BC059068
EMBL:BC096531 IPI:IPI00420535 RefSeq:NP_001155007.1
RefSeq:NP_001155008.1 RefSeq:NP_001155009.1 RefSeq:NP_001155010.1
RefSeq:NP_001155011.1 RefSeq:NP_001155012.1 RefSeq:NP_001155013.1
RefSeq:NP_796167.2 UniGene:Mm.186499 ProteinModelPortal:Q5RKR3
SMR:Q5RKR3 STRING:Q5RKR3 PhosphoSite:Q5RKR3 PaxDb:Q5RKR3
PRIDE:Q5RKR3 Ensembl:ENSMUST00000114144 Ensembl:ENSMUST00000163897
Ensembl:ENSMUST00000165276 Ensembl:ENSMUST00000170421 GeneID:320563
KEGG:mmu:320563 UCSC:uc009pwl.1 GeneTree:ENSGT00700000104028
InParanoid:Q5RKR3 NextBio:396975 Bgee:Q5RKR3 Genevestigator:Q5RKR3
Uniprot:Q5RKR3
Length = 745
Score = 171 (65.3 bits), Expect = 8.6e-12, P = 8.6e-12
Identities = 37/114 (32%), Positives = 68/114 (59%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
+++ LS++ N+ + +RRGA + ++TSL H+++ +E + LS L +LDL+HN
Sbjct: 51 ANVTTLSLSANKITVLRRGAFVNVTQVTSLWLAHSEVRTVESGALAVLSQLKNLDLSHNL 110
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTP 124
I + L +LS L L ++HN L +L +D + L L+ LR+++N + + P
Sbjct: 111 ISNFPWSDLRNLSALQLLKMNHNRLGSLPRDALGALPDLRSLRINNNRLRTLEP 164
Score = 142 (55.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 30/66 (45%), Positives = 42/66 (63%)
Query: 4 WCTVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 63
W +R LS+L++L + HN+ S+ R AL L L SL ++N++ LE +F ALS LSH
Sbjct: 116 WSDLRNLSALQLLKMNHNRLGSLPRDALGALPDLRSLRINNNRLRTLEPGTFDALSALSH 175
Query: 64 LDLAHN 69
L L HN
Sbjct: 176 LQLYHN 181
Score = 130 (50.8 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 35/102 (34%), Positives = 53/102 (51%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
L +AH++ +V GALA L +L +L HN I R LS L L + HNR+ ++
Sbjct: 80 LWLAHSEVRTVESGALAVLSQLKNLDLSHNLISNFPWSDLRNLSALQLLKMNHNRLGSLP 139
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
+L L +L +L +++N LR L L +L L+L N
Sbjct: 140 RDALGALPDLRSLRINNNRLRTLEPGTFDALSALSHLQLYHN 181
Score = 128 (50.1 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 35/110 (31%), Positives = 57/110 (51%)
Query: 19 AHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGAS 78
A+ + V G A + T+LS N+I VL +F ++ ++ L LAH+ + V +
Sbjct: 38 AYKELREVPEGLPANV---TTLSLSANKITVLRRGAFVNVTQVTSLWLAHSEVRTVESGA 94
Query: 79 LAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
LA LS L LDLSHN + + L +LQ L+++ N + + D +G
Sbjct: 95 LAVLSQLKNLDLSHNLISNFPWSDLRNLSALQLLKMNHNRLGSLPRDALG 144
>ZFIN|ZDB-GENE-060503-496 [details] [associations]
symbol:lrrc24 "leucine rich repeat containing 24"
species:7955 "Danio rerio" [GO:0005515 "protein binding"
evidence=IPI] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 ZFIN:ZDB-GENE-060503-496
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104028 CTD:441381 EMBL:BX000489
IPI:IPI00876679 RefSeq:XP_694151.2 UniGene:Dr.141919
Ensembl:ENSDART00000114047 GeneID:565790 KEGG:dre:565790
NextBio:20887101 Bgee:F1QV37 Uniprot:F1QV37
Length = 594
Score = 169 (64.5 bits), Expect = 9.9e-12, P = 9.9e-12
Identities = 44/110 (40%), Positives = 58/110 (52%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
R L L L++ N+ + GLD L L NQI+ LED++FR L L L L
Sbjct: 96 RSLGLLLELALNGNRIHLITADVFRGLDHLRILYLAGNQINRLEDYTFRGLQRLQELHLQ 155
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
N + + +L LS+L LDLS N LR L+ + PL SLQ LR+ DN
Sbjct: 156 ENVLEVLGDQALVGLSSLALLDLSRNNLRTLSPASLKPLVSLQVLRVTDN 205
Score = 120 (47.3 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 37/130 (28%), Positives = 59/130 (45%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L L + +N S++ GA L L L+ + N+I ++ FR L L L LA N
Sbjct: 74 LGQLHYLYLQNNSISTLEPGAFRSLGLLLELALNGNRIHLITADVFRGLDHLRILYLAGN 133
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+I + + L L L L N L L + L SL L L N++ ++P +
Sbjct: 134 QINRLEDYTFRGLQRLQELHLQENVLEVLGDQALVGLSSLALLDLSRNNLRTLSPASLKP 193
Query: 130 NVTITTLTLS 139
V++ L ++
Sbjct: 194 LVSLQVLRVT 203
Score = 115 (45.5 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 38/127 (29%), Positives = 61/127 (48%)
Query: 14 KVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVA 73
+ + + N +R+ L+ L +L L +N I LE +FR+L L L L NRI
Sbjct: 54 QTIFLQDNAIGQIRQRDLSDLGQLHYLYLQNNSISTLEPGAFRSLGLLLELALNGNRIHL 113
Query: 74 VSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDN--V 131
++ L +L L L+ N + L L+ LQEL L +N + +V+GD V
Sbjct: 114 ITADVFRGLDHLRILYLAGNQINRLEDYTFRGLQRLQELHLQENVL-----EVLGDQALV 168
Query: 132 TITTLTL 138
+++L L
Sbjct: 169 GLSSLAL 175
>UNIPROTKB|F1P8A1 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 Pfam:PF00054 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF12661 Pfam:PF01463
GeneTree:ENSGT00700000104083 CTD:9353 KO:K06839 OMA:RHKMFKG
EMBL:AAEX03002614 EMBL:AAEX03002615 EMBL:AAEX03002616
RefSeq:XP_854843.1 ProteinModelPortal:F1P8A1
Ensembl:ENSCAFT00000026343 GeneID:595148 KEGG:cfa:595148
Uniprot:F1P8A1
Length = 1530
Score = 134 (52.2 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 31/114 (27%), Positives = 58/114 (50%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L+VL + N+ S++ RGA L +L L + N + + + F S L LDL+ N
Sbjct: 78 LRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTSKLYRLDLSEN 137
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVT 123
+I A+ + ++ L L +N + + L+ L+ L L++N+I+ ++
Sbjct: 138 QIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLS 191
Score = 127 (49.8 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 32/85 (37%), Positives = 44/85 (51%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
S L L ++ NQ ++ R A G + +L +NQI +ED +FRAL L L L +N
Sbjct: 127 SKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNN 186
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFL 95
I +S AS H+ L T L N L
Sbjct: 187 ITRLSVASFNHMPKLRTFRLHSNNL 211
Score = 118 (46.6 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 32/105 (30%), Positives = 52/105 (49%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
L+ + +++NQ S + A GL L SL + N+I L F L +L L L N+I
Sbjct: 326 LRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKIN 385
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
+ + L NL L L N L+ + + +PL+++Q + L N
Sbjct: 386 CLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQN 430
Score = 117 (46.2 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 29/78 (37%), Positives = 45/78 (57%)
Query: 61 LSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
L+ +DL++NRI +S S ++++ L TL LS+N LR + LKSL+ L L NDIS
Sbjct: 779 LTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDIS 838
Query: 121 MVTPDVIGDNVTITTLTL 138
+V D ++ L +
Sbjct: 839 VVPEGAFSDLSALSHLAI 856
Score = 111 (44.1 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 32/124 (25%), Positives = 60/124 (48%)
Query: 16 LSIAHNQFSSVRR-GALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAV 74
L + +N+F+ + G L +L ++ +N+I +E+ +F + ++ + L NR+ V
Sbjct: 538 LRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGAAGVNEILLTSNRLENV 597
Query: 75 SGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTIT 134
L +L TL L N + + D L S++ L L DN I+ + P +++
Sbjct: 598 QHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQIATIAPGAFDTLHSLS 657
Query: 135 TLTL 138
TL L
Sbjct: 658 TLNL 661
Score = 108 (43.1 bits), Expect = 0.00011, P = 0.00011
Identities = 27/107 (25%), Positives = 50/107 (46%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
++L L+ ++ ++N+ + + GA G + + N+++ ++ F+ L +L L L
Sbjct: 555 KKLPQLRKINFSNNKITDIEEGAFEGAAGVNEILLTSNRLENVQHKMFKGLESLKTLMLR 614
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRL 114
NRI V S LS++ L L N + + L SL L L
Sbjct: 615 SNRISCVGNDSFIGLSSVRLLSLYDNQIATIAPGAFDTLHSLSTLNL 661
Score = 105 (42.0 bits), Expect = 0.00023, P = 0.00023
Identities = 33/124 (26%), Positives = 52/124 (41%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
L + N + + + AGL L L N+I +E +F+ L L L L N +
Sbjct: 60 LDLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFP 119
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITT 135
S L LDLS N ++A+ + ++ L+LD N IS + +
Sbjct: 120 ELLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEV 179
Query: 136 LTLS 139
LTL+
Sbjct: 180 LTLN 183
Score = 98 (39.6 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 29/104 (27%), Positives = 50/104 (48%)
Query: 35 DKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNF 94
+ +T + N I V+ +F L +DL++N+I ++ + L +L +L L N
Sbjct: 300 ETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 359
Query: 95 LRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTLTL 138
+ L + L L SLQ L L+ N I+ + D D + L+L
Sbjct: 360 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSL 403
Score = 85 (35.0 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 22/60 (36%), Positives = 31/60 (51%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L SLK L + N+ S V + GL + LS + NQI + +F L +LS L+L N
Sbjct: 605 LESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQIATIAPGAFDTLHSLSTLNLLAN 664
Score = 45 (20.9 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 10/40 (25%), Positives = 20/40 (50%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 47
R L L+VL++ +N + + + + KL + H N +
Sbjct: 172 RALRDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNL 211
>UNIPROTKB|Q96JA1 [details] [associations]
symbol:LRIG1 "Leucine-rich repeats and immunoglobulin-like
domains protein 1" species:9606 "Homo sapiens" [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
CleanEx:HS_LIG1 Pfam:PF01463 EMBL:AF381545 EMBL:AB050468
EMBL:BC071561 EMBL:BC014276 EMBL:AL117666 IPI:IPI00000775
IPI:IPI00470372 PIR:T17346 RefSeq:NP_056356.2 UniGene:Hs.518055
ProteinModelPortal:Q96JA1 SMR:Q96JA1 IntAct:Q96JA1 STRING:Q96JA1
PhosphoSite:Q96JA1 DMDM:143811415 PaxDb:Q96JA1 PRIDE:Q96JA1
Ensembl:ENST00000273261 Ensembl:ENST00000383703 GeneID:26018
KEGG:hsa:26018 UCSC:uc003dmw.3 UCSC:uc010hoa.3 CTD:26018
GeneCards:GC03M066511 H-InvDB:HIX0003431 HGNC:HGNC:17360 MIM:608868
neXtProt:NX_Q96JA1 PharmGKB:PA38450 HOGENOM:HOG000113380
HOVERGEN:HBG052353 InParanoid:Q96JA1 OMA:ESNGVCP OrthoDB:EOG48PMJN
PhylomeDB:Q96JA1 ChiTaRS:LRIG1 GenomeRNAi:26018 NextBio:47784
Bgee:Q96JA1 CleanEx:HS_LRIG1 Genevestigator:Q96JA1
GermOnline:ENSG00000144749 Uniprot:Q96JA1
Length = 1093
Score = 164 (62.8 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 41/115 (35%), Positives = 63/115 (54%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID-VLEDHS--FRALSTLS 62
++ LSSL VL ++HN S + GA GL L L HN+I +ED S F L +LS
Sbjct: 326 SLAELSSLSVLRLSHNSISHIAEGAFKGLRSLRVLDLDHNEISGTIEDTSGAFSGLDSLS 385
Query: 63 HLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
L L N+I +V+ + + L L L+L N +R++ D +K+L+EL + +
Sbjct: 386 KLTLFGNKIKSVAKRAFSGLEGLEHLNLGGNAIRSVQFDAFVKMKNLKELHISSD 440
Score = 152 (58.6 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 44/134 (32%), Positives = 66/134 (49%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
LS + VL + +N V G+L GL L L +N I + + L L L+ N
Sbjct: 258 LSKMHVLHLEYNSLVEVNSGSLYGLTALHQLHLSNNSIARIHRKGWSFCQKLHELVLSFN 317
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG- 128
+ + SLA LS+L+ L LSHN + + + L+SL+ L LD N+IS D G
Sbjct: 318 NLTRLDEESLAELSSLSVLRLSHNSISHIAEGAFKGLRSLRVLDLDHNEISGTIEDTSGA 377
Query: 129 -DNV-TITTLTLSG 140
+ +++ LTL G
Sbjct: 378 FSGLDSLSKLTLFG 391
Score = 140 (54.3 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 38/117 (32%), Positives = 56/117 (47%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T + L+SL+VL + N S + GA GL K+ L +N + + S L+ L L
Sbjct: 230 TFQGLNSLEVLKLQRNNISKLTDGAFWGLSKMHVLHLEYNSLVEVNSGSLYGLTALHQLH 289
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
L++N I + + L L LS N L L ++ + L SL LRL N IS +
Sbjct: 290 LSNNSIARIHRKGWSFCQKLHELVLSFNNLTRLDEESLAELSSLSVLRLSHNSISHI 346
Score = 119 (46.9 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 32/90 (35%), Positives = 47/90 (52%)
Query: 10 LSSLKVLSIAHNQFSSV---RRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
L SL+VL + HN+ S GA +GLD L+ L+ N+I + +F L L HL+L
Sbjct: 354 LRSLRVLDLDHNEISGTIEDTSGAFSGLDSLSKLTLFGNKIKSVAKRAFSGLEGLEHLNL 413
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHN-FL 95
N I +V + + NL L +S + FL
Sbjct: 414 GGNAIRSVQFDAFVKMKNLKELHISSDSFL 443
Score = 118 (46.6 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 36/131 (27%), Positives = 63/131 (48%)
Query: 9 RLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 68
+L L L + N+ + GL+ L L N I L D +F LS + L L +
Sbjct: 209 KLPRLTQLDLNRNRIRLIEGLTFQGLNSLEVLKLQRNNISKLTDGAFWGLSKMHVLHLEY 268
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
N +V V+ SL L+ L L LS+N + + + + + L EL L N+++ + + +
Sbjct: 269 NSLVEVNSGSLYGLTALHQLHLSNNSIARIHRKGWSFCQKLHELVLSFNNLTRLDEESLA 328
Query: 129 DNVTITTLTLS 139
+ +++ L LS
Sbjct: 329 ELSSLSVLRLS 339
Score = 34 (17.0 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 107 KSLQELRLDDNDISMVTPDV 126
K +E + + D ++V PDV
Sbjct: 820 KKSEEYSVTNTDETVVPPDV 839
>MGI|MGI:2389174 [details] [associations]
symbol:Lrrtm2 "leucine rich repeat transmembrane neuronal 2"
species:10090 "Mus musculus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=ISS] [GO:0030054 "cell junction"
evidence=IEA] [GO:0042043 "neurexin family protein binding"
evidence=ISO] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0050808 "synapse
organization" evidence=IGI;ISO] [GO:0060076 "excitatory synapse"
evidence=ISO] InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2389174
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0050808
InterPro:IPR000372 SMART:SM00013 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00700000104056 HOGENOM:HOG000290681
HOVERGEN:HBG052362 CTD:26045 OMA:IRQCSMI OrthoDB:EOG4PG60Z
EMBL:AY182027 EMBL:AK043173 EMBL:AK043784 EMBL:AK044705
EMBL:AK046818 EMBL:AK049920 EMBL:AK122278 IPI:IPI00313492
RefSeq:NP_821072.1 UniGene:Mm.39900 ProteinModelPortal:Q8BGA3
SMR:Q8BGA3 STRING:Q8BGA3 PhosphoSite:Q8BGA3 PaxDb:Q8BGA3
PRIDE:Q8BGA3 DNASU:107065 Ensembl:ENSMUST00000091636 GeneID:107065
KEGG:mmu:107065 UCSC:uc008ema.1 InParanoid:Q8BGA3 NextBio:358560
Bgee:Q8BGA3 CleanEx:MM_LRRTM2 Genevestigator:Q8BGA3
GermOnline:ENSMUSG00000071862 Uniprot:Q8BGA3
Length = 515
Score = 167 (63.8 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 41/124 (33%), Positives = 63/124 (50%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
LS+ HN +++ R A +LT L HNQI +++ +F+ L L L L+ N+I +
Sbjct: 66 LSLRHNHITALERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLP 125
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITT 135
+ L NL LDLS N L +L +L L+ LQ L L N + + + D ++
Sbjct: 126 NTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEF 185
Query: 136 LTLS 139
L LS
Sbjct: 186 LDLS 189
Score = 146 (56.5 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 39/129 (30%), Positives = 68/129 (52%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
SL+ L ++ N+ S+ R AGL KL L HNQ+ + F LS+L L L N+I
Sbjct: 182 SLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKI 241
Query: 72 VAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNV 131
++ S L LDL+ N ++A+ + + +L+ L +D+N ++ + ++
Sbjct: 242 SNLTCGMDWTWSTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILNSLK 301
Query: 132 TITTLTLSG 140
++TT+ LSG
Sbjct: 302 SLTTVGLSG 310
Score = 133 (51.9 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 38/107 (35%), Positives = 53/107 (49%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
S L L + HNQ S+V+ A GL KL L N+I L + +F L L +LDL+ N+
Sbjct: 85 SQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQ 144
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
+ ++ L L TL L N LR + L +SL+ L L N
Sbjct: 145 LSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTN 191
Score = 123 (48.4 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 42/135 (31%), Positives = 62/135 (45%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T +L +L+ L ++ NQ SS+ GL KL +L N + + F +L LD
Sbjct: 128 TFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLD 187
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
L+ NR+ +++ A L L L L HN L + L SL L L N IS +T
Sbjct: 188 LSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLTCG 247
Query: 126 VIGDNVTITTLTLSG 140
+ T+ L L+G
Sbjct: 248 MDWTWSTLEKLDLTG 262
Score = 106 (42.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 33/108 (30%), Positives = 47/108 (43%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L+ L + HNQ + + L L +L N+I L STL LDL N
Sbjct: 204 LIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLTCGMDWTWSTLEKLDLTGN 263
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
I A+ + NL L + +N L +L ++ LKSL + L N
Sbjct: 264 EIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILNSLKSLTTVGLSGN 311
>RGD|1593785 [details] [associations]
symbol:Lrrtm2 "leucine rich repeat transmembrane neuronal 2"
species:10116 "Rattus norvegicus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0042043 "neurexin
family protein binding" evidence=IPI] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0050808 "synapse organization"
evidence=ISO;IDA] [GO:0060076 "excitatory synapse" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 RGD:1593785 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 InterPro:IPR003591
SMART:SM00369 GO:GO:0050808 InterPro:IPR000372 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GO:GO:0060076 EMBL:CH473974
CTD:26045 OrthoDB:EOG4PG60Z IPI:IPI00202163 RefSeq:NP_001102939.1
UniGene:Rn.218238 Ensembl:ENSRNOT00000026825 GeneID:685472
KEGG:rno:685472 UCSC:RGD:1593785 NextBio:729781 Uniprot:D4A7P2
Length = 515
Score = 167 (63.8 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 41/124 (33%), Positives = 63/124 (50%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
LS+ HN +++ R A +LT L HNQI +++ +F+ L L L L+ N+I +
Sbjct: 66 LSLRHNHITALERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLP 125
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITT 135
+ L NL LDLS N L +L +L L+ LQ L L N + + + D ++
Sbjct: 126 NTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEF 185
Query: 136 LTLS 139
L LS
Sbjct: 186 LDLS 189
Score = 146 (56.5 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 39/129 (30%), Positives = 68/129 (52%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
SL+ L ++ N+ S+ R AGL KL L HNQ+ + F LS+L L L N+I
Sbjct: 182 SLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKI 241
Query: 72 VAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNV 131
++ S L LDL+ N ++A+ + + +L+ L +D+N ++ + ++
Sbjct: 242 SNLTCGMEWTWSTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILSSLR 301
Query: 132 TITTLTLSG 140
++TT+ LSG
Sbjct: 302 SLTTVGLSG 310
Score = 133 (51.9 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 38/107 (35%), Positives = 53/107 (49%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
S L L + HNQ S+V+ A GL KL L N+I L + +F L L +LDL+ N+
Sbjct: 85 SQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQ 144
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
+ ++ L L TL L N LR + L +SL+ L L N
Sbjct: 145 LSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTN 191
Score = 123 (48.4 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 42/135 (31%), Positives = 62/135 (45%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T +L +L+ L ++ NQ SS+ GL KL +L N + + F +L LD
Sbjct: 128 TFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLD 187
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
L+ NR+ +++ A L L L L HN L + L SL L L N IS +T
Sbjct: 188 LSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLTCG 247
Query: 126 VIGDNVTITTLTLSG 140
+ T+ L L+G
Sbjct: 248 MEWTWSTLEKLDLTG 262
Score = 104 (41.7 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 32/108 (29%), Positives = 48/108 (44%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L+ L + HNQ + + L L +L N+I L STL LDL N
Sbjct: 204 LIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLTCGMEWTWSTLEKLDLTGN 263
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
I A+ + NL L + +N L +L +++ L+SL + L N
Sbjct: 264 EIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILSSLRSLTTVGLSGN 311
>UNIPROTKB|A6H701 [details] [associations]
symbol:LRRTM2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050808 "synapse organization" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GeneTree:ENSGT00700000104056
HOGENOM:HOG000290681 HOVERGEN:HBG052362 CTD:26045 OMA:IRQCSMI
OrthoDB:EOG4PG60Z EMBL:DAAA02020406 EMBL:BC146061 IPI:IPI00709063
RefSeq:NP_001092847.1 UniGene:Bt.55901 Ensembl:ENSBTAT00000018866
GeneID:520949 KEGG:bta:520949 InParanoid:A6H701 NextBio:20873206
Uniprot:A6H701
Length = 516
Score = 166 (63.5 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 41/124 (33%), Positives = 62/124 (50%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
LS+ HN + + R A +LT L HNQI +++ +F+ L L L L+ N+I +
Sbjct: 66 LSLRHNHITELERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLP 125
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITT 135
+ L NL LDLS N L +L +L L+ LQ L L N + + + D ++
Sbjct: 126 NTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEF 185
Query: 136 LTLS 139
L LS
Sbjct: 186 LDLS 189
Score = 142 (55.0 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 38/129 (29%), Positives = 67/129 (51%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
SL+ L ++ N+ S+ R AGL KL L HNQ+ + F LS+L L L N+I
Sbjct: 182 SLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKI 241
Query: 72 VAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNV 131
++ L LDL+ N ++A+ + + +L+ L +D+N ++ + ++
Sbjct: 242 SNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILNSLR 301
Query: 132 TITTLTLSG 140
++TT+ LSG
Sbjct: 302 SLTTVGLSG 310
Score = 133 (51.9 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 38/107 (35%), Positives = 53/107 (49%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
S L L + HNQ S+V+ A GL KL L N+I L + +F L L +LDL+ N+
Sbjct: 85 SQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQ 144
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
+ ++ L L TL L N LR + L +SL+ L L N
Sbjct: 145 LSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTN 191
Score = 122 (48.0 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 42/135 (31%), Positives = 62/135 (45%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T +L +L+ L ++ NQ SS+ GL KL +L N + + F +L LD
Sbjct: 128 TFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLD 187
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
L+ NR+ +++ A L L L L HN L + L SL L L N IS +T
Sbjct: 188 LSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLTCG 247
Query: 126 VIGDNVTITTLTLSG 140
+ T+ L L+G
Sbjct: 248 MEWTWGTLEKLDLTG 262
>UNIPROTKB|O43300 [details] [associations]
symbol:LRRTM2 "Leucine-rich repeat transmembrane neuronal
protein 2" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0042043 "neurexin family protein binding" evidence=IEA]
[GO:0050808 "synapse organization" evidence=IEA] [GO:0060076
"excitatory synapse" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 SMART:SM00013 InterPro:IPR025875
Pfam:PF12799 UniGene:Hs.656653 CleanEx:HS_LRRN2
HOGENOM:HOG000290681 HOVERGEN:HBG052362 EMBL:AY182026 EMBL:AB007876
EMBL:AK291064 EMBL:BC126408 EMBL:BC126410 EMBL:BC143926
IPI:IPI00023576 RefSeq:NP_056379.1 ProteinModelPortal:O43300
SMR:O43300 STRING:O43300 PhosphoSite:O43300 PRIDE:O43300
DNASU:26045 Ensembl:ENST00000274711 GeneID:26045 KEGG:hsa:26045
UCSC:uc011cyz.1 CTD:26045 GeneCards:GC05M138205 HGNC:HGNC:19409
HPA:HPA017323 MIM:610868 neXtProt:NX_O43300 PharmGKB:PA134993038
InParanoid:O43300 OMA:IRQCSMI OrthoDB:EOG4PG60Z GenomeRNAi:26045
NextBio:47883 ArrayExpress:O43300 Bgee:O43300 CleanEx:HS_LRRTM2
Genevestigator:O43300 Uniprot:O43300
Length = 516
Score = 166 (63.5 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 41/124 (33%), Positives = 62/124 (50%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
LS+ HN + + R A +LT L HNQI +++ +F+ L L L L+ N+I +
Sbjct: 66 LSLRHNHITELERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLP 125
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITT 135
+ L NL LDLS N L +L +L L+ LQ L L N + + + D ++
Sbjct: 126 NTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEF 185
Query: 136 LTLS 139
L LS
Sbjct: 186 LDLS 189
Score = 142 (55.0 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 38/129 (29%), Positives = 67/129 (51%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
SL+ L ++ N+ S+ R AGL KL L HNQ+ + F LS+L L L N+I
Sbjct: 182 SLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKI 241
Query: 72 VAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNV 131
++ L LDL+ N ++A+ + + +L+ L +D+N ++ + ++
Sbjct: 242 SNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILNSLR 301
Query: 132 TITTLTLSG 140
++TT+ LSG
Sbjct: 302 SLTTVGLSG 310
Score = 133 (51.9 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 38/107 (35%), Positives = 53/107 (49%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
S L L + HNQ S+V+ A GL KL L N+I L + +F L L +LDL+ N+
Sbjct: 85 SQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQ 144
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
+ ++ L L TL L N LR + L +SL+ L L N
Sbjct: 145 LSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTN 191
Score = 122 (48.0 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 42/135 (31%), Positives = 62/135 (45%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T +L +L+ L ++ NQ SS+ GL KL +L N + + F +L LD
Sbjct: 128 TFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLD 187
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
L+ NR+ +++ A L L L L HN L + L SL L L N IS +T
Sbjct: 188 LSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLTCG 247
Query: 126 VIGDNVTITTLTLSG 140
+ T+ L L+G
Sbjct: 248 MEWTWGTLEKLDLTG 262
>UNIPROTKB|F1NWG8 [details] [associations]
symbol:F1NWG8 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0050808 "synapse organization" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104056 OMA:IRQCSMI EMBL:AADN02035971
IPI:IPI00583715 Ensembl:ENSGALT00000003872 Uniprot:F1NWG8
Length = 520
Score = 166 (63.5 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 42/124 (33%), Positives = 63/124 (50%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
LS+ HN + + R A +LT L HNQI + + SF+ L L L L+ N+I +
Sbjct: 71 LSLRHNFITELERDQFASFSQLTWLHLDHNQIATVREDSFQGLYKLKELVLSSNKIFHLP 130
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITT 135
+ + L NL LDLS N L +L +L+ L+ LQ L L N + + + D ++
Sbjct: 131 NTTFSQLLNLQNLDLSFNQLSSLHPELLYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEF 190
Query: 136 LTLS 139
L LS
Sbjct: 191 LDLS 194
Score = 144 (55.7 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 39/129 (30%), Positives = 67/129 (51%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
SL+ L ++ N+ S+ R AGL KL L HNQ+ + F LS+L L L N+I
Sbjct: 187 SLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKI 246
Query: 72 VAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNV 131
++ L LDL+ N ++A+ + + +L+ L LD+N +S + ++
Sbjct: 247 SNLTCGMEWTWGTLEKLDLTGNDIKAIDLTVFETMPNLKTLLLDNNKLSTLDSKILRSLP 306
Query: 132 TITTLTLSG 140
+++T+ LSG
Sbjct: 307 SLSTVGLSG 315
Score = 132 (51.5 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 38/107 (35%), Positives = 54/107 (50%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
S L L + HNQ ++VR + GL KL L N+I L + +F L L +LDL+ N+
Sbjct: 90 SQLTWLHLDHNQIATVREDSFQGLYKLKELVLSSNKIFHLPNTTFSQLLNLQNLDLSFNQ 149
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
+ ++ L L L TL L N LR + L +SL+ L L N
Sbjct: 150 LSSLHPELLYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTN 196
Score = 126 (49.4 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 43/135 (31%), Positives = 63/135 (46%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T +L +L+ L ++ NQ SS+ L GL KL +L N + + F +L LD
Sbjct: 133 TFSQLLNLQNLDLSFNQLSSLHPELLYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLD 192
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
L+ NR+ +++ A L L L L HN L + L SL L L N IS +T
Sbjct: 193 LSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLTCG 252
Query: 126 VIGDNVTITTLTLSG 140
+ T+ L L+G
Sbjct: 253 MEWTWGTLEKLDLTG 267
>UNIPROTKB|O75325 [details] [associations]
symbol:LRRN2 "Leucine-rich repeat neuronal protein 2"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0004872 "receptor activity" evidence=TAS]
[GO:0007155 "cell adhesion" evidence=TAS] [GO:0007165 "signal
transduction" evidence=TAS] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 GO:GO:0007165
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 EMBL:CH471067
GO:GO:0004872 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 MEROPS:I43.001 HOGENOM:HOG000252914
HOVERGEN:HBG052361 EMBL:AF030435 EMBL:AY358290 EMBL:AK312408
EMBL:AL512306 EMBL:BC034047 EMBL:BC068541 IPI:IPI00025256
RefSeq:NP_006329.2 RefSeq:NP_963924.1 UniGene:Hs.26312
ProteinModelPortal:O75325 SMR:O75325 IntAct:O75325 STRING:O75325
PhosphoSite:O75325 PRIDE:O75325 DNASU:10446 Ensembl:ENST00000367175
Ensembl:ENST00000367176 Ensembl:ENST00000367177 GeneID:10446
KEGG:hsa:10446 UCSC:uc001hbe.1 CTD:10446 GeneCards:GC01M204586
H-InvDB:HIX0001502 HGNC:HGNC:16914 HPA:HPA029124 MIM:605492
neXtProt:NX_O75325 PharmGKB:PA162394661 InParanoid:O75325
OMA:LHQQTVE OrthoDB:EOG4JWVCZ PhylomeDB:O75325 GenomeRNAi:10446
NextBio:39593 ArrayExpress:O75325 Bgee:O75325 CleanEx:HS_LRRN2
Genevestigator:O75325 GermOnline:ENSG00000170382 Uniprot:O75325
Length = 713
Score = 168 (64.2 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 42/131 (32%), Positives = 66/131 (50%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L++L L ++ N FS R L +L SL NQ+ LEDHSF L++L L L HN
Sbjct: 92 LANLTELDLSQNSFSDARDCDFHALPQLLSLHLEENQLTRLEDHSFAGLASLQELYLNHN 151
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
++ ++ + + LSNL L L+ N LRA+ L +L+ L + N + +
Sbjct: 152 QLYRIAPRAFSGLSNLLRLHLNSNLLRAIDSRWFEMLPNLEILMIGGNKVDAILDMNFRP 211
Query: 130 NVTITTLTLSG 140
+ +L L+G
Sbjct: 212 LANLRSLVLAG 222
Score = 124 (48.7 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 33/113 (29%), Positives = 57/113 (50%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L+SL+ L + HNQ + A +GL L L + N + ++ F L L L + N
Sbjct: 140 LASLQELYLNHNQLYRIAPRAFSGLSNLLRLHLNSNLLRAIDSRWFEMLPNLEILMIGGN 199
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
++ A+ + L+NL +L L+ LR ++ + L+SL+ L DN ++ V
Sbjct: 200 KVDAILDMNFRPLANLRSLVLAGMNLREISDYALEGLQSLESLSFYDNQLARV 252
Score = 110 (43.8 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 33/110 (30%), Positives = 48/110 (43%)
Query: 5 CTVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHL 64
C L L L + NQ + + + AGL L L +HNQ+ + +F LS L L
Sbjct: 111 CDFHALPQLLSLHLEENQLTRLEDHSFAGLASLQELYLNHNQLYRIAPRAFSGLSNLLRL 170
Query: 65 DLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRL 114
L N + A+ L NL L + N + A+ PL +L+ L L
Sbjct: 171 HLNSNLLRAIDSRWFEMLPNLEILMIGGNKVDAILDMNFRPLANLRSLVL 220
Score = 105 (42.0 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 32/115 (27%), Positives = 56/115 (48%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHH-NQIDVLEDHSFRALSTLSHLD 65
+ ++ LK L + N V G A + L L ++ ++ ++ + L L+ LD
Sbjct: 257 LEQVPGLKFLDLNKNPLQRVGPGDFANMLHLKELGLNNMEELVSIDKFALVNLPELTKLD 316
Query: 66 LAHN-RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
+ +N R+ + + HL + TL L++N L AL Q + L +LQE+ L N I
Sbjct: 317 ITNNPRLSFIHPRAFHHLPQMETLMLNNNALSALHQQTVESLPNLQEVGLHGNPI 371
Score = 103 (41.3 bits), Expect = 0.00015, P = 0.00015
Identities = 31/104 (29%), Positives = 44/104 (42%)
Query: 14 KVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVA 73
+ L + N V + L L LT L N D F AL L L L N++
Sbjct: 72 QTLLLQSNSIVRVDQSELGYLANLTELDLSQNSFSDARDCDFHALPQLLSLHLEENQLTR 131
Query: 74 VSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
+ S A L++L L L+HN L + + L +L L L+ N
Sbjct: 132 LEDHSFAGLASLQELYLNHNQLYRIAPRAFSGLSNLLRLHLNSN 175
>MGI|MGI:107935 [details] [associations]
symbol:Lrig1 "leucine-rich repeats and immunoglobulin-like
domains 1" species:10090 "Mus musculus" [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:107935 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GeneTree:ENSGT00690000101816 Pfam:PF01463 CTD:26018
HOGENOM:HOG000113380 HOVERGEN:HBG052353 OMA:ESNGVCP
OrthoDB:EOG48PMJN ChiTaRS:LRIG1 EMBL:D78572 EMBL:AC122272
EMBL:AC155330 IPI:IPI00136475 PIR:A58532 RefSeq:NP_032403.2
UniGene:Mm.245210 ProteinModelPortal:P70193 SMR:P70193
STRING:P70193 PhosphoSite:P70193 PaxDb:P70193 PRIDE:P70193
Ensembl:ENSMUST00000032105 Ensembl:ENSMUST00000101126 GeneID:16206
KEGG:mmu:16206 UCSC:uc009czu.1 InParanoid:P70193 NextBio:289161
Bgee:P70193 Genevestigator:P70193 GermOnline:ENSMUSG00000030029
Uniprot:P70193
Length = 1091
Score = 162 (62.1 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 40/110 (36%), Positives = 61/110 (55%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID-VLEDHS--FRALSTLS 62
++ LSSL +L ++HN S + GA GL L L HN+I +ED S F L LS
Sbjct: 328 SLAELSSLSILRLSHNAISHIAEGAFKGLKSLRVLDLDHNEISGTIEDTSGAFTGLDNLS 387
Query: 63 HLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQEL 112
L L N+I +V+ + + L +L L+L N +R++ D +K+L+EL
Sbjct: 388 KLTLFGNKIKSVAKRAFSGLESLEHLNLGENAIRSVQFDAFAKMKNLKEL 437
Score = 160 (61.4 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 47/136 (34%), Positives = 67/136 (49%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
LS + VL + +N V G+L GL L L +N I ++ + L L L+ N
Sbjct: 260 LSKMHVLHLEYNSLVEVNSGSLYGLTALHQLHLSNNSISRIQRDGWSFCQKLHELILSFN 319
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG- 128
+ + SLA LS+L+ L LSHN + + + LKSL+ L LD N+IS D G
Sbjct: 320 NLTRLDEESLAELSSLSILRLSHNAISHIAEGAFKGLKSLRVLDLDHNEISGTIEDTSGA 379
Query: 129 ----DNVTITTLTLSG 140
DN ++ LTL G
Sbjct: 380 FTGLDN--LSKLTLFG 393
Score = 132 (51.5 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 38/117 (32%), Positives = 55/117 (47%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T + L SL+VL + N S + GA GL K+ L +N + + S L+ L L
Sbjct: 232 TFQGLDSLEVLRLQRNNISRLTDGAFWGLSKMHVLHLEYNSLVEVNSGSLYGLTALHQLH 291
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
L++N I + + L L LS N L L ++ + L SL LRL N IS +
Sbjct: 292 LSNNSISRIQRDGWSFCQKLHELILSFNNLTRLDEESLAELSSLSILRLSHNAISHI 348
Score = 129 (50.5 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 38/113 (33%), Positives = 59/113 (52%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALS-TLSHLDLAHNR 70
SL+VL ++ N + +R ++ L+ N+I +LE +F LS +L L L+ NR
Sbjct: 142 SLEVLDLSSNNITEIRSSCFPNGLRIRELNLASNRISILESGAFDGLSRSLLTLRLSKNR 201
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVT 123
I + + L LT LDL+ N +R + L SL+ LRL N+IS +T
Sbjct: 202 ITQLPVKAFK-LPRLTQLDLNRNRIRLIEGLTFQGLDSLEVLRLQRNNISRLT 253
Score = 128 (50.1 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 38/131 (29%), Positives = 64/131 (48%)
Query: 9 RLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 68
+L L L + N+ + GLD L L N I L D +F LS + L L +
Sbjct: 211 KLPRLTQLDLNRNRIRLIEGLTFQGLDSLEVLRLQRNNISRLTDGAFWGLSKMHVLHLEY 270
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
N +V V+ SL L+ L L LS+N + + +D + + L EL L N+++ + + +
Sbjct: 271 NSLVEVNSGSLYGLTALHQLHLSNNSISRIQRDGWSFCQKLHELILSFNNLTRLDEESLA 330
Query: 129 DNVTITTLTLS 139
+ +++ L LS
Sbjct: 331 ELSSLSILRLS 341
Score = 127 (49.8 bits), Expect = 8.1e-08, Sum P(2) = 8.1e-08
Identities = 33/90 (36%), Positives = 48/90 (53%)
Query: 10 LSSLKVLSIAHNQFSSV---RRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
L SL+VL + HN+ S GA GLD L+ L+ N+I + +F L +L HL+L
Sbjct: 356 LKSLRVLDLDHNEISGTIEDTSGAFTGLDNLSKLTLFGNKIKSVAKRAFSGLESLEHLNL 415
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLS-HNFL 95
N I +V + A + NL L +S +FL
Sbjct: 416 GENAIRSVQFDAFAKMKNLKELYISSESFL 445
Score = 114 (45.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 32/123 (26%), Positives = 60/123 (48%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
L++++N+ S + A L L + + N++ + ++ +S L L HN+I++V
Sbjct: 75 LNLSYNRLSEIDSAAFEDLTNLQEVYLNSNELTAIPSLGAASIGVVS-LFLQHNKILSVD 133
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITT 135
G+ L +L LDLS N + + ++EL L N IS++ D ++ +
Sbjct: 134 GSQLKSYLSLEVLDLSSNNITEIRSSCFPNGLRIRELNLASNRISILESGAF-DGLSRSL 192
Query: 136 LTL 138
LTL
Sbjct: 193 LTL 195
Score = 34 (17.0 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 107 KSLQELRLDDNDISMVTPDV 126
K +E + + D ++V PDV
Sbjct: 822 KKSEEYSVTNTDETIVPPDV 841
>FB|FBgn0036494 [details] [associations]
symbol:Toll-6 "Toll-6" species:7227 "Drosophila melanogaster"
[GO:0004888 "transmembrane signaling receptor activity"
evidence=ISS;NAS] [GO:0005886 "plasma membrane" evidence=NAS]
[GO:0016021 "integral to membrane" evidence=ISS] [GO:0006952
"defense response" evidence=NAS] [GO:0007165 "signal transduction"
evidence=IEA;ISS] Pfam:PF00560 InterPro:IPR000157
InterPro:IPR001611 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 GO:GO:0016021 InterPro:IPR003591 SMART:SM00369
GO:GO:0045087 GO:GO:0005622 InterPro:IPR000372 SMART:SM00013
GO:GO:0004888 SUPFAM:SSF52200 HSSP:O60603 FlyBase:FBgn0036494
EMBL:AF247766 ProteinModelPortal:Q9NBK9 STRING:Q9NBK9 PRIDE:Q9NBK9
InParanoid:Q9NBK9 ArrayExpress:Q9NBK9 Bgee:Q9NBK9 Uniprot:Q9NBK9
Length = 1514
Score = 170 (64.9 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 45/133 (33%), Positives = 70/133 (52%)
Query: 10 LSSLKVLSIAHNQFSS--VRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
L L+ L ++ NQ +S + + GL +L L+ HN++ LE F L TL L+L
Sbjct: 373 LDQLQALDLSMNQITSTWIDKNTFVGLIRLVLLNLSHNKLTKLEPEIFSDLYTLQILNLR 432
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI 127
HN++ ++ + A ++NL TL LSHN L+ L + L L L LD+N + V PD
Sbjct: 433 HNQLENIAADTFAPMNNLHTLLLSHNKLKYLDAYALNGLYVLSLLSLDNNALIGVHPDAF 492
Query: 128 GDNVTITTLTLSG 140
+ + L L+G
Sbjct: 493 RNCSALQDLNLNG 505
Score = 122 (48.0 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 31/113 (27%), Positives = 58/113 (51%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L +L+++HN+ + + + L L L+ HNQ++ + +F ++ L L L+HN
Sbjct: 399 LIRLVLLNLSHNKLTKLEPEIFSDLYTLQILNLRHNQLENIAADTFAPMNNLHTLLLSHN 458
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
++ + +L L L+ L L +N L + D +LQ+L L+ N + V
Sbjct: 459 KLKYLDAYALNGLYVLSLLSLDNNALIGVHPDAFRNCSALQDLNLNGNQLKTV 511
Score = 122 (48.0 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 38/134 (28%), Positives = 64/134 (47%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T +++L L ++HN+ + AL GL L+ LS +N + + +FR S L L+
Sbjct: 443 TFAPMNNLHTLLLSHNKLKYLDAYALNGLYVLSLLSLDNNALIGVHPDAFRNCSALQDLN 502
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
L N++ V A L ++ +L T+DL N + + L +L LRL N + +T
Sbjct: 503 LNGNQLKTVPLA-LRNMRHLRTVDLGENMITVMEDSAFKGLGNLYGLRLIGNYLENITMH 561
Query: 126 VIGDNVTITTLTLS 139
D + L L+
Sbjct: 562 TFRDLPNLQILNLA 575
Score = 120 (47.3 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 33/113 (29%), Positives = 57/113 (50%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
R S+L+ L++ NQ +V AL + L ++ N I V+ED +F+ L L L L
Sbjct: 493 RNCSALQDLNLNGNQLKTVPL-ALRNMRHLRTVDLGENMITVMEDSAFKGLGNLYGLRLI 551
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
N + ++ + L NL L+L+ N + + S+Q +RLD N+++
Sbjct: 552 GNYLENITMHTFRDLPNLQILNLARNRIAVVEPGAFEMTSSIQAVRLDGNELN 604
Score = 118 (46.6 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 36/107 (33%), Positives = 54/107 (50%)
Query: 34 LDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHN 93
LD L L HN VL + F L L L + +N I ++ +L+ L NL L+LS N
Sbjct: 277 LD-LEYLDVSHNDFVVLPANGFGTLRRLRVLSVNNNGISMIADKALSGLKNLQILNLSSN 335
Query: 94 FLRALTQDLITP-LKSLQELRLDDNDISMVTPDVIGDNVTITTLTLS 139
+ AL +L K +QE+ L +N IS++ P + + + L LS
Sbjct: 336 KIVALPTELFAEQAKIIQEVYLQNNSISVLNPQLFSNLDQLQALDLS 382
Score = 118 (46.6 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 39/136 (28%), Positives = 65/136 (47%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF-RALSTLSHL 64
T+RRL +VLS+ +N S + AL+GL L L+ N+I L F + +
Sbjct: 299 TLRRL---RVLSVNNNGISMIADKALSGLKNLQILNLSSNKIVALPTELFAEQAKIIQEV 355
Query: 65 DLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRA--LTQDLITPLKSLQELRLDDNDISMV 122
L +N I ++ ++L L LDLS N + + + ++ L L L L N ++ +
Sbjct: 356 YLQNNSISVLNPQLFSNLDQLQALDLSMNQITSTWIDKNTFVGLIRLVLLNLSHNKLTKL 415
Query: 123 TPDVIGDNVTITTLTL 138
P++ D T+ L L
Sbjct: 416 EPEIFSDLYTLQILNL 431
Score = 115 (45.5 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 32/109 (29%), Positives = 53/109 (48%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
L+ L ++HN F + L +L LS ++N I ++ D + L L L+L+ N+IV
Sbjct: 279 LEYLDVSHNDFVVLPANGFGTLRRLRVLSVNNNGISMIADKALSGLKNLQILNLSSNKIV 338
Query: 73 AVSGASLAHLSNLTT-LDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
A+ A + + + L +N + L L + L LQ L L N I+
Sbjct: 339 ALPTELFAEQAKIIQEVYLQNNSISVLNPQLFSNLDQLQALDLSMNQIT 387
Score = 114 (45.2 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 36/128 (28%), Positives = 56/128 (43%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
L +LS+ +N V A L L+ + NQ+ + + R + L +DL N I
Sbjct: 474 LSLLSLDNNALIGVHPDAFRNCSALQDLNLNGNQLKTVP-LALRNMRHLRTVDLGENMIT 532
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVT 132
+ ++ L NL L L N+L +T L +LQ L L N I++V P +
Sbjct: 533 VMEDSAFKGLGNLYGLRLIGNYLENITMHTFRDLPNLQILNLARNRIAVVEPGAFEMTSS 592
Query: 133 ITTLTLSG 140
I + L G
Sbjct: 593 IQAVRLDG 600
Score = 112 (44.5 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 31/111 (27%), Positives = 51/111 (45%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
+R + L+ + + N + + A GL L L N ++ + H+FR L L L+L
Sbjct: 515 LRNMRHLRTVDLGENMITVMEDSAFKGLGNLYGLRLIGNYLENITMHTFRDLPNLQILNL 574
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
A NRI V + S++ + L N L + L + + SL L + DN
Sbjct: 575 ARNRIAVVEPGAFEMTSSIQAVRLDGNELNDIN-GLFSNMPSLLWLNISDN 624
Score = 106 (42.4 bits), Expect = 0.00018, P = 0.00018
Identities = 38/129 (29%), Positives = 64/129 (49%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
SS++ + + N+ + + G + + L L+ N+++ D+ STL LDL NR
Sbjct: 591 SSIQAVRLDGNELNDIN-GLFSNMPSLLWLNISDNRLESF-DYG-HVPSTLQWLDLHKNR 647
Query: 71 IVAVSGA-SLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+ ++S L L TLD+S N L+ + I P S++ L L+DN I+ V PD
Sbjct: 648 LSSLSNRFGLDSELKLQTLDVSFNQLQRIGPSSI-P-NSIELLFLNDNLITTVDPDTFMH 705
Query: 130 NVTITTLTL 138
+T + L
Sbjct: 706 KTNLTRVDL 714
>UNIPROTKB|E1BX56 [details] [associations]
symbol:LRRTM1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007610 "behavior" evidence=IEA] [GO:0030424
"axon" evidence=IEA] [GO:0030426 "growth cone" evidence=IEA]
[GO:0035418 "protein localization to synapse" evidence=IEA]
[GO:0050808 "synapse organization" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005783 GO:GO:0007610 GO:GO:0030424
InterPro:IPR003591 SMART:SM00369 GO:GO:0050808 GO:GO:0030426
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0035418
GeneTree:ENSGT00700000104056 CTD:347730 KO:K16665 OMA:EPDLFHG
EMBL:AADN02014722 IPI:IPI00599810 RefSeq:XP_001233729.1
ProteinModelPortal:E1BX56 Ensembl:ENSGALT00000025729 GeneID:771502
KEGG:gga:771502 NextBio:20921702 Uniprot:E1BX56
Length = 521
Score = 164 (62.8 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 40/122 (32%), Positives = 63/122 (51%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
R LS + LS+ +N S + G GL +LT L HN I +E ++F+ L + L L+
Sbjct: 62 RNLSGMMGLSLRYNSLSELHDGQFTGLMQLTWLYLDHNHICSVEGNAFQKLRRVKELTLS 121
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI 127
N+I + + + NL ++DLS+N L++L DL L+ L L + N I V +
Sbjct: 122 SNKITQLPNNTFRPMPNLRSVDLSYNNLQSLEPDLFHGLRKLTTLHMRSNAIKFVPVRIF 181
Query: 128 GD 129
D
Sbjct: 182 QD 183
Score = 151 (58.2 bits), Expect = 7.0e-10, P = 7.0e-10
Identities = 40/128 (31%), Positives = 66/128 (51%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
SLK L I +NQ S+ R + AGL KLT L HN + + F L +L L L N++
Sbjct: 186 SLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNLAHFPRLISLHSLCLRRNKV 245
Query: 72 VAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNV 131
V +L + L LDLS N + + + + L+ L+LD N ++ + ++
Sbjct: 246 TIVVN-TLDWIWQLEKLDLSGNEIEYIEPHVFESVPHLKSLQLDSNRLTYIDSRILDSWK 304
Query: 132 TITTLTLS 139
++T+++LS
Sbjct: 305 SLTSISLS 312
Score = 126 (49.4 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 35/117 (29%), Positives = 58/117 (49%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T R + +L+ + +++N S+ GL KLT+L N I + F+ +L LD
Sbjct: 132 TFRPMPNLRSVDLSYNNLQSLEPDLFHGLRKLTTLHMRSNAIKFVPVRIFQDCRSLKFLD 191
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
+ +N++ +++ S A L LT L L HN L + L SL L L N +++V
Sbjct: 192 IGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNLAHFPRLISLHSLCLRRNKVTIV 248
Score = 123 (48.4 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 31/103 (30%), Positives = 49/103 (47%)
Query: 34 LDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHN 93
L + LS +N + L D F L L+ L L HN I +V G + L + L LS N
Sbjct: 64 LSGMMGLSLRYNSLSELHDGQFTGLMQLTWLYLDHNHICSVEGNAFQKLRRVKELTLSSN 123
Query: 94 FLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTL 136
+ L + P+ +L+ + L N++ + PD+ +TTL
Sbjct: 124 KITQLPNNTFRPMPNLRSVDLSYNNLQSLEPDLFHGLRKLTTL 166
Score = 113 (44.8 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 30/115 (26%), Positives = 54/115 (46%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
++L +K L+++ N+ + + + L S+ +N + LE F L L+ L +
Sbjct: 110 QKLRRVKELTLSSNKITQLPNNTFRPMPNLRSVDLSYNNLQSLEPDLFHGLRKLTTLHMR 169
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
N I V +L LD+ +N L++L ++ L L EL L+ ND+ V
Sbjct: 170 SNAIKFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKV 224
Score = 111 (44.1 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 34/130 (26%), Positives = 61/130 (46%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L L + HN SV A L ++ L+ N+I L +++FR + L +DL++N
Sbjct: 88 LMQLTWLYLDHNHICSVEGNAFQKLRRVKELTLSSNKITQLPNNTFRPMPNLRSVDLSYN 147
Query: 70 RIVAVSGASLAH-LSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
+ ++ L H L LTTL + N ++ + + +SL+ L + N + + +
Sbjct: 148 NLQSLE-PDLFHGLRKLTTLHMRSNAIKFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFA 206
Query: 129 DNVTITTLTL 138
+T L L
Sbjct: 207 GLFKLTELHL 216
>UNIPROTKB|Q86VH4 [details] [associations]
symbol:LRRTM4 "Leucine-rich repeat transmembrane neuronal
protein 4" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290681
HOVERGEN:HBG052362 EMBL:AY182030 EMBL:AY358324 EMBL:BC099738
EMBL:BC110058 IPI:IPI00465323 IPI:IPI00884323 RefSeq:NP_001128217.1
RefSeq:NP_079269.4 UniGene:Hs.285782 ProteinModelPortal:Q86VH4
SMR:Q86VH4 STRING:Q86VH4 PhosphoSite:Q86VH4 DMDM:166897996
PaxDb:Q86VH4 PRIDE:Q86VH4 Ensembl:ENST00000409088
Ensembl:ENST00000409093 Ensembl:ENST00000409884 GeneID:80059
KEGG:hsa:80059 UCSC:uc002snq.3 UCSC:uc002sns.2 CTD:80059
GeneCards:GC02M076974 HGNC:HGNC:19411 MIM:610870 neXtProt:NX_Q86VH4
PharmGKB:PA134972631 ChiTaRS:LRRTM4 GenomeRNAi:80059 NextBio:70258
ArrayExpress:Q86VH4 Bgee:Q86VH4 CleanEx:HS_LRRTM4
Genevestigator:Q86VH4 Uniprot:Q86VH4
Length = 590
Score = 164 (62.8 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 41/129 (31%), Positives = 67/129 (51%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
+L L + +N+ S+ R A AGL KL L HNQ + F L L + L NRI
Sbjct: 182 NLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRI 241
Query: 72 VAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNV 131
++S S+L LDLS N ++ + L +LQ+L LD N ++ ++ + + +
Sbjct: 242 RSISQGLTWTWSSLHNLDLSGNDIQGIEPGTFKCLPNLQKLNLDSNKLTNISQETVNAWI 301
Query: 132 TITTLTLSG 140
++ ++TLSG
Sbjct: 302 SLISITLSG 310
Score = 133 (51.9 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 34/114 (29%), Positives = 55/114 (48%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
LS+ N ++ AGL++L L HN I +++ +F+ + L L L+ N+I +
Sbjct: 66 LSLRFNSIQKLKSNQFAGLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITYLH 125
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+ + NL LDLS+N L+ L + L+ L L L N + V V D
Sbjct: 126 NKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRVFQD 179
Score = 119 (46.9 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 31/110 (28%), Positives = 52/110 (47%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
LK L ++ N+ + + + L +L +N++ L+ F+ L L L L N +
Sbjct: 111 LKELILSSNKITYLHNKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLK 170
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
V NL LDL +N LR+L+++ L L+EL L+ N S +
Sbjct: 171 TVPIRVFQDCRNLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKI 220
Score = 117 (46.2 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 33/115 (28%), Positives = 51/115 (44%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L +L + N +V L L +N++ L ++F L L L L HN
Sbjct: 156 LRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHN 215
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTP 124
+ ++ A L NL ++ L N +R+++Q L SL L L NDI + P
Sbjct: 216 QFSKINFAHFPRLFNLRSIYLQWNRIRSISQGLTWTWSSLHNLDLSGNDIQGIEP 270
Score = 111 (44.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 33/129 (25%), Positives = 58/129 (44%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L+ L L + HN SSV A G+ +L L N+I L + +F + L +LDL++N
Sbjct: 84 LNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITYLHNKTFHPVPNLRNLDLSYN 143
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
++ + L L L L N L+ + + ++L L L N + ++ +
Sbjct: 144 KLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGYNRLRSLSRNAFAG 203
Query: 130 NVTITTLTL 138
+ + L L
Sbjct: 204 LLKLKELHL 212
Score = 110 (43.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 33/108 (30%), Positives = 49/108 (45%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L LK L + HNQFS + L L S+ N+I + S+L +LDL+ N
Sbjct: 204 LLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRSISQGLTWTWSSLHNLDLSGN 263
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
I + + L NL L+L N L ++Q+ + SL + L N
Sbjct: 264 DIQGIEPGTFKCLPNLQKLNLDSNKLTNISQETVNAWISLISITLSGN 311
Score = 109 (43.4 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 34/135 (25%), Positives = 61/135 (45%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T + +L+ L +++N+ +++ GL KL L N + + F+ L LD
Sbjct: 128 TFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLD 187
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
L +NR+ ++S + A L L L L HN + L +L+ + L N I ++
Sbjct: 188 LGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRSISQG 247
Query: 126 VIGDNVTITTLTLSG 140
+ ++ L LSG
Sbjct: 248 LTWTWSSLHNLDLSG 262
>UNIPROTKB|Q27972 [details] [associations]
symbol:CHAD "Chondroadherin" species:9913 "Bos taurus"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005578
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
EMBL:U08018 IPI:IPI00711211 PIR:A53860 RefSeq:NP_776444.1
UniGene:Bt.91648 ProteinModelPortal:Q27972 IntAct:Q27972
STRING:Q27972 PRIDE:Q27972 GeneID:281069 KEGG:bta:281069 CTD:1101
HOGENOM:HOG000013150 HOVERGEN:HBG005324 InParanoid:Q27972 KO:K06248
OrthoDB:EOG4K9BCM NextBio:20805150 InterPro:IPR026906 Pfam:PF13306
Uniprot:Q27972
Length = 361
Score = 159 (61.0 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 41/122 (33%), Positives = 61/122 (50%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
R + +L L + H Q V GA GL +L L HN I VL +F L+ L++L L
Sbjct: 74 RAMPNLVSLHLQHCQIREVAAGAFRGLKQLIYLYLSHNDIRVLRAGAFDDLTELTYLYLD 133
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI 127
HN++ + L+ L NL L L++N +R L K L+ L L +N +S + P +
Sbjct: 134 HNKVTELPRGLLSPLVNLFILQLNNNKIRELRSGAFQGAKDLRWLYLSENSLSSLQPGAL 193
Query: 128 GD 129
D
Sbjct: 194 DD 195
Score = 138 (53.6 bits), Expect = 9.1e-09, P = 9.1e-09
Identities = 35/106 (33%), Positives = 56/106 (52%)
Query: 14 KVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVA 73
K+L++ N F + + + L SL H QI + +FR L L +L L+HN I
Sbjct: 56 KLLNLQRNNFPVLATNSFRAMPNLVSLHLQHCQIREVAAGAFRGLKQLIYLYLSHNDIRV 115
Query: 74 VSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
+ + L+ LT L L HN + L + L++PL +L L+L++N I
Sbjct: 116 LRAGAFDDLTELTYLYLDHNKVTELPRGLLSPLVNLFILQLNNNKI 161
Score = 120 (47.3 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 32/116 (27%), Positives = 58/116 (50%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L+ L L + HN+ + + RG L+ L L L ++N+I L +F+ L L L+ N
Sbjct: 124 LTELTYLYLDHNKVTELPRGLLSPLVNLFILQLNNNKIRELRSGAFQGAKDLRWLYLSEN 183
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
+ ++ +L + NL L N L + ++ L+ ++EL+L N + + PD
Sbjct: 184 SLSSLQPGALDDVENLAKFYLDRNQLSSYPSAALSKLRVVEELKLSHNPLKSI-PD 238
Score = 114 (45.2 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 33/105 (31%), Positives = 48/105 (45%)
Query: 35 DKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNF 94
+K L+ N VL +SFRA+ L L L H +I V+ + L L L LSHN
Sbjct: 53 EKTKLLNLQRNNFPVLATNSFRAMPNLVSLHLQHCQIREVAAGAFRGLKQLIYLYLSHND 112
Query: 95 LRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTLTLS 139
+R L L L L LD N ++ + ++ V + L L+
Sbjct: 113 IRVLRAGAFDDLTELTYLYLDHNKVTELPRGLLSPLVNLFILQLN 157
Score = 114 (45.2 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 37/132 (28%), Positives = 57/132 (43%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
R L L L ++HN +R GA L +LT L HN++ L L L L L
Sbjct: 98 RGLKQLIYLYLSHNDIRVLRAGAFDDLTELTYLYLDHNKVTELPRGLLSPLVNLFILQLN 157
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI 127
+N+I + + +L L LS N L +L + +++L + LD N +S +
Sbjct: 158 NNKIRELRSGAFQGAKDLRWLYLSENSLSSLQPGALDDVENLAKFYLDRNQLSSYPSAAL 217
Query: 128 GDNVTITTLTLS 139
+ L LS
Sbjct: 218 SKLRVVEELKLS 229
>UNIPROTKB|P02750 [details] [associations]
symbol:LRG1 "Leucine-rich alpha-2-glycoprotein"
species:9606 "Homo sapiens" [GO:0050873 "brown fat cell
differentiation" evidence=IEA] [GO:0016020 "membrane" evidence=NAS]
[GO:0005576 "extracellular region" evidence=NAS] [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0005615 "extracellular space" evidence=IDA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005615
GO:GO:0016020 EMBL:AF403428 EMBL:BC034389 EMBL:BC070198
IPI:IPI00022417 PIR:A03211 RefSeq:NP_443204.1 UniGene:Hs.655559
ProteinModelPortal:P02750 SMR:P02750 STRING:P02750
PhosphoSite:P02750 DMDM:23503037 DOSAC-COBS-2DPAGE:P02750
SWISS-2DPAGE:P02750 PaxDb:P02750 PeptideAtlas:P02750 PRIDE:P02750
DNASU:116844 Ensembl:ENST00000306390 GeneID:116844 KEGG:hsa:116844
UCSC:uc002mau.3 CTD:116844 GeneCards:GC19M004538 HGNC:HGNC:29480
HPA:HPA001888 HPA:HPA001889 MIM:611289 neXtProt:NX_P02750
PharmGKB:PA134919634 eggNOG:COG4886 HOGENOM:HOG000234378
HOVERGEN:HBG000045 InParanoid:P02750 OMA:RCAGPEA OrthoDB:EOG4TMR2P
PhylomeDB:P02750 GenomeRNAi:116844 NextBio:80020
ArrayExpress:P02750 Bgee:P02750 CleanEx:HS_LRG1
Genevestigator:P02750 GermOnline:ENSG00000171236 GO:GO:0050873
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
Uniprot:P02750
Length = 347
Score = 158 (60.7 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 43/135 (31%), Positives = 68/135 (50%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
+R + L+VL + N + + G L +L NQ++VLE L L HLDL
Sbjct: 112 LRPVPQLRVLDLTRNALTGLPPGLFQASATLDTLVLKENQLEVLEVSWLHGLKALGHLDL 171
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLIT-PLKSLQELRLDDNDISMVTPD 125
+ NR+ + LA+ + L TLDL N L L DL+ PL+ L+ L L+ N + ++ D
Sbjct: 172 SGNRLRKLPPGLLANFTLLRTLDLGENQLETLPPDLLRGPLQ-LERLHLEGNKLQVLGKD 230
Query: 126 VIGDNVTITTLTLSG 140
++ + L L+G
Sbjct: 231 LLLPQPDLRYLFLNG 245
Score = 115 (45.5 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 38/130 (29%), Positives = 60/130 (46%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
S L+ L ++ N S+ L + +L L N + L F+A +TL L L N+
Sbjct: 92 SKLQELHLSSNGLESLSPEFLRPVPQLRVLDLTRNALTGLPPGLFQASATLDTLVLKENQ 151
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDN 130
+ + + L L L LDLS N LR L L+ L+ L L +N + + PD++
Sbjct: 152 LEVLEVSWLHGLKALGHLDLSGNRLRKLPPGLLANFTLLRTLDLGENQLETLPPDLLRGP 211
Query: 131 VTITTLTLSG 140
+ + L L G
Sbjct: 212 LQLERLHLEG 221
>UNIPROTKB|G3MXX5 [details] [associations]
symbol:RTN4R "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0009986 "cell surface" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005783 GO:GO:0005886
GO:GO:0009986 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101803 OMA:PLWAWLQ EMBL:DAAA02045821
Ensembl:ENSBTAT00000065527 Uniprot:G3MXX5
Length = 473
Score = 160 (61.4 bits), Expect = 6.3e-11, P = 6.3e-11
Identities = 41/110 (37%), Positives = 59/110 (53%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
R L++L+ L + N ++ A + L LT L H N I + + +FR L +L L L
Sbjct: 151 RGLAALQYLYLQDNGLQALPDDAFSDLGNLTHLFLHGNHIPSVPERAFRGLHSLDRLLLH 210
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
NR+ V + L L TL L N L AL+ + + PL+SLQ LRL+DN
Sbjct: 211 QNRVARVHPHAFRDLGRLMTLYLFANNLSALSAEALAPLRSLQYLRLNDN 260
Score = 124 (48.7 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 39/121 (32%), Positives = 55/121 (45%)
Query: 21 NQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN-RIVAVSGASL 79
N+ + V + LT L H N + ++ +F L+ L LDL+ N ++ AV A+
Sbjct: 67 NRIAYVPAASFRACRNLTILWLHSNALAHIDAAAFSGLALLEQLDLSDNAQLRAVDPATF 126
Query: 80 AHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTLTLS 139
L L TL L LR L L L +LQ L L DN + + D D +T L L
Sbjct: 127 RGLGRLHTLHLDRCGLRELGPGLFRGLAALQYLYLQDNGLQALPDDAFSDLGNLTHLFLH 186
Query: 140 G 140
G
Sbjct: 187 G 187
Score = 110 (43.8 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 38/130 (29%), Positives = 59/130 (45%)
Query: 10 LSSLKVLSIAHN-QFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 68
L+ L+ L ++ N Q +V GL +L +L + L FR L+ L +L L
Sbjct: 104 LALLEQLDLSDNAQLRAVDPATFRGLGRLHTLHLDRCGLRELGPGLFRGLAALQYLYLQD 163
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
N + A+ + + L NLT L L N + ++ + L SL L L N ++ V P
Sbjct: 164 NGLQALPDDAFSDLGNLTHLFLHGNHIPSVPERAFRGLHSLDRLLLHQNRVARVHPHAFR 223
Query: 129 DNVTITTLTL 138
D + TL L
Sbjct: 224 DLGRLMTLYL 233
>ZFIN|ZDB-GENE-010306-4 [details] [associations]
symbol:slit3 "slit (Drosophila) homolog 3"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0030517 "negative regulation of axon extension"
evidence=IGI;IMP] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 ZFIN:ZDB-GENE-010306-4 GO:GO:0005576
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GO:GO:0030517 InterPro:IPR006207
PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041 Pfam:PF02210
Pfam:PF12661 InterPro:IPR026906 Pfam:PF13306 Pfam:PF01463
GeneTree:ENSGT00700000104083 EMBL:AL928691 EMBL:BX323583
IPI:IPI00502606 Ensembl:ENSDART00000146299 ArrayExpress:F1RCV3
Bgee:F1RCV3 Uniprot:F1RCV3
Length = 1516
Score = 166 (63.5 bits), Expect = 7.3e-11, P = 7.3e-11
Identities = 38/129 (29%), Positives = 69/129 (53%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L +L+VL + +NQ S + RGA GL +L + + N++ VL + F++ + LS LDL+ N
Sbjct: 75 LKNLRVLHLENNQISVIERGAFEGLKQLERIRLNRNRLQVLPELLFQSTTKLSRLDLSEN 134
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+I AV + ++ + L L N + + L+ L+ L L++N+I+++
Sbjct: 135 QIQAVPRKAFRGITTVKNLQLDSNHISCIEDGAFRALRDLEILTLNNNNITLIPLSSFNH 194
Query: 130 NVTITTLTL 138
+ TL L
Sbjct: 195 MPKLRTLRL 203
Score = 128 (50.1 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 34/105 (32%), Positives = 54/105 (51%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
LK + ++ NQ S + A +GL LTSL + N+I + F L +L L L N+I
Sbjct: 325 LKRIDLSKNQISEIAEDAFSGLRSLTSLVLYGNKIAEIPKGLFDGLVSLQLLLLNANKIN 384
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
+ + L NL L L N L+ +++ L PL++++ L L N
Sbjct: 385 CLRVNTFKDLQNLNLLSLYDNKLQTISKGLFAPLRAIKTLHLAQN 429
Score = 127 (49.8 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 30/107 (28%), Positives = 53/107 (49%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
L + N + + + +GL L L +NQI V+E +F L L + L NR+ +
Sbjct: 57 LDLDRNNITRITKVDFSGLKNLRVLHLENNQISVIERGAFEGLKQLERIRLNRNRLQVLP 116
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
+ L+ LDLS N ++A+ + + +++ L+LD N IS +
Sbjct: 117 ELLFQSTTKLSRLDLSENQIQAVPRKAFRGITTVKNLQLDSNHISCI 163
Score = 120 (47.3 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 30/85 (35%), Positives = 43/85 (50%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
+ L L ++ NQ +V R A G+ + +L N I +ED +FRAL L L L +N
Sbjct: 124 TKLSRLDLSENQIQAVPRKAFRGITTVKNLQLDSNHISCIEDGAFRALRDLEILTLNNNN 183
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFL 95
I + +S H+ L TL L N L
Sbjct: 184 ITLIPLSSFNHMPKLRTLRLHSNNL 208
Score = 108 (43.1 bits), Expect = 0.00011, P = 0.00011
Identities = 28/110 (25%), Positives = 51/110 (46%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
++L +L+ +++++N+ +R GA G + L N++ + F+ L L L L
Sbjct: 546 KKLPNLRKINLSNNKLRDIREGAFDGAGGVLELLLTGNKLQSVSGRMFKGLIGLKTLMLR 605
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
N+I V A+ LS++ L L N + + L SL + L N
Sbjct: 606 SNQISCVDNATFTGLSSVRLLSLYDNRISTIAPGAFNTLHSLSTINLLSN 655
Score = 107 (42.7 bits), Expect = 0.00014, P = 0.00014
Identities = 33/124 (26%), Positives = 57/124 (45%)
Query: 16 LSIAHNQFSSVRR-GALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAV 74
L + N+ S + GA L L ++ +N++ + + +F + L L N++ +V
Sbjct: 529 LRLNDNEISILEATGAFKKLPNLRKINLSNNKLRDIREGAFDGAGGVLELLLTGNKLQSV 588
Query: 75 SGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTIT 134
SG L L TL L N + + T L S++ L L DN IS + P +++
Sbjct: 589 SGRMFKGLIGLKTLMLRSNQISCVDNATFTGLSSVRLLSLYDNRISTIAPGAFNTLHSLS 648
Query: 135 TLTL 138
T+ L
Sbjct: 649 TINL 652
Score = 103 (41.3 bits), Expect = 0.00037, P = 0.00037
Identities = 31/124 (25%), Positives = 55/124 (44%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
+ + N ++ GA + KL + NQI + + +F L +L+ L L N+I +
Sbjct: 304 IRLEQNMIKNIPAGAFSTYKKLKRIDLSKNQISEIAEDAFSGLRSLTSLVLYGNKIAEIP 363
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITT 135
L +L L L+ N + L + L++L L L DN + ++ + I T
Sbjct: 364 KGLFDGLVSLQLLLLNANKINCLRVNTFKDLQNLNLLSLYDNKLQTISKGLFAPLRAIKT 423
Query: 136 LTLS 139
L L+
Sbjct: 424 LHLA 427
Score = 95 (38.5 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 25/81 (30%), Positives = 44/81 (54%)
Query: 58 LSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
L L+ LDL++N I ++ + ++++ L TL LS+N +R + L+SL+ L L N
Sbjct: 767 LKQLTLLDLSNNSISHLAPLTFSNMTQLATLILSYNQIRCVPVHAFDGLRSLRLLTLHGN 826
Query: 118 DISMVTPDVIGDNVTITTLTL 138
D+S V +++ L L
Sbjct: 827 DLSTVPEGAFNHLTSLSHLAL 847
Score = 55 (24.4 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 13/40 (32%), Positives = 24/40 (60%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 45
T LSS+++LS+ N+ S++ GA L L++++ N
Sbjct: 616 TFTGLSSVRLLSLYDNRISTIAPGAFNTLHSLSTINLLSN 655
>UNIPROTKB|C9JYU3 [details] [associations]
symbol:LRRC32 "Leucine-rich repeat-containing protein 32"
species:9606 "Homo sapiens" [GO:0010628 "positive regulation of
gene expression" evidence=IEA] [GO:0046007 "negative regulation of
activated T cell proliferation" evidence=IEA] [GO:0050710 "negative
regulation of cytokine secretion" evidence=IEA] GO:GO:0010628
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0046007
GO:GO:0050710 HGNC:HGNC:4161 ChiTaRS:LRRC32 HOGENOM:HOG000001578
EMBL:AP001189 IPI:IPI00794430 ProteinModelPortal:C9JYU3 SMR:C9JYU3
STRING:C9JYU3 PRIDE:C9JYU3 Ensembl:ENST00000421973
ArrayExpress:C9JYU3 Bgee:C9JYU3 Uniprot:C9JYU3
Length = 186
Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 43/129 (33%), Positives = 64/129 (49%)
Query: 14 KVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV- 72
+ L ++ NQ S+ L L L N+I L+ +F+AL+ L HL LAHNR+
Sbjct: 52 ETLDLSGNQLRSILASPLGFYTALRHLDLSTNEISFLQPGAFQALTHLEHLSLAHNRLAM 111
Query: 73 --AVSGASLAHLSNLTTLDLSHNFLRA-LTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
A+S L L +T+LDLS N L + L + L+ SL L L +N ++ +T D
Sbjct: 112 ATALSAGGLGPLPRVTSLDLSGNSLYSGLLERLLGEAPSLHTLSLAENSLTRLTRHTFRD 171
Query: 130 NVTITTLTL 138
+ L L
Sbjct: 172 MPALEQLDL 180
Score = 98 (39.6 bits), Expect = 0.00039, P = 0.00039
Identities = 32/111 (28%), Positives = 55/111 (49%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTL---SHLDLA 67
++L+ L ++ N+ S ++ GA L L LS HN++ + S L L + LDL+
Sbjct: 73 TALRHLDLSTNEISFLQPGAFQALTHLEHLSLAHNRLAMATALSAGGLGPLPRVTSLDLS 132
Query: 68 HNRIVA-VSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
N + + + L +L TL L+ N L LT+ + +L++L L N
Sbjct: 133 GNSLYSGLLERLLGEAPSLHTLSLAENSLTRLTRHTFRDMPALEQLDLHSN 183
>FB|FBgn0259677 [details] [associations]
symbol:CG42346 species:7227 "Drosophila melanogaster"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR003961 PROSITE:PS51450 SMART:SM00060 Gene3D:2.60.40.10
InterPro:IPR013783 EMBL:AE014298 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082
RefSeq:NP_001036306.2 UniGene:Dm.23593 ProteinModelPortal:Q0KHN6
SMR:Q0KHN6 GeneID:3355160 KEGG:dme:Dmel_CG42346 FlyBase:FBgn0259677
InParanoid:Q0KHN6 OMA:RHFSIPN OrthoDB:EOG40ZPCD PhylomeDB:Q0KHN6
GenomeRNAi:3355160 NextBio:850922 Bgee:Q0KHN6 Uniprot:Q0KHN6
Length = 1639
Score = 166 (63.5 bits), Expect = 8.0e-11, P = 8.0e-11
Identities = 37/130 (28%), Positives = 70/130 (53%)
Query: 9 RLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 68
+L SL L ++ NQF+ + +L +LS + NQI++++ +F++L L LD++H
Sbjct: 280 QLPSLIFLDLSSNQFAEIGPDCFRAFPQLKTLSFYANQIELVQPEAFKSLRELMSLDMSH 339
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
NRI+ + L T+DLSHN + + + + L L+E+ L +N+I + D
Sbjct: 340 NRIIGLDPKVFEKNKRLQTVDLSHNHIHTIG-GVFSNLPQLREVFLSENNILELPADAFT 398
Query: 129 DNVTITTLTL 138
++ + + L
Sbjct: 399 NSTNVDVIYL 408
Score = 148 (57.2 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 38/115 (33%), Positives = 59/115 (51%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T L L+ L ++ NQ +RR A L L LS N I+ +E ++F L L LD
Sbjct: 612 TFVNLLLLQFLDLSGNQLRQLRRDYFAPLQDLEELSLARNHIEAIEGYAFAKLKNLKSLD 671
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
L+HN +V ++ ++ L +L+L + LR L Q L +L EL L+ N ++
Sbjct: 672 LSHNPLVQLTRDIFSNEFPLNSLNLGNCSLRKLEQHAFKSLTNLNELNLERNQLN 726
Score = 140 (54.3 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 41/131 (31%), Positives = 60/131 (45%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
R LK LS NQ V+ A L +L SL HN+I L+ F L +DL+
Sbjct: 303 RAFPQLKTLSFYANQIELVQPEAFKSLRELMSLDMSHNRIIGLDPKVFEKNKRLQTVDLS 362
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI 127
HN I + G ++L L + LS N + L D T ++ + L+ N I+ + P+V
Sbjct: 363 HNHIHTIGGV-FSNLPQLREVFLSENNILELPADAFTNSTNVDVIYLESNAIAHIDPNVF 421
Query: 128 GDNVTITTLTL 138
V + L L
Sbjct: 422 STLVNLDHLYL 432
Score = 134 (52.2 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 36/97 (37%), Positives = 48/97 (49%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
L ++ N+ + + L L L NQ+ L F L L L LA N I A+
Sbjct: 598 LYLSDNKIRDIEKDTFVNLLLLQFLDLSGNQLRQLRRDYFAPLQDLEELSLARNHIEAIE 657
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLIT---PLKSL 109
G + A L NL +LDLSHN L LT+D+ + PL SL
Sbjct: 658 GYAFAKLKNLKSLDLSHNPLVQLTRDIFSNEFPLNSL 694
Score = 131 (51.2 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 33/132 (25%), Positives = 60/132 (45%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
R+L L+ + + +N+ VRRG L L L N I+ +E +F L + H++L
Sbjct: 470 RKLEHLREVRLHNNRIRRVRRGVFEPLPSLQELHIQKNSIEDIEPQAFHTLENMQHINLQ 529
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI 127
N++ + S+L ++ L N+L + + + +Q + L DN ++ V
Sbjct: 530 DNQLTVLEDIFPDENSSLLSVQLEANYLHKVHPRTFSRQQKVQIMWLKDNQLTRVERSFF 589
Query: 128 GDNVTITTLTLS 139
D + L LS
Sbjct: 590 ADTPQLGRLYLS 601
Score = 131 (51.2 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 41/134 (30%), Positives = 65/134 (48%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
++ RLS L + N+ +V+ L +L C N + +L F A L HL
Sbjct: 933 SIPRLSWLNLTGNPINRIYTVKEERYPYLKEL--YICQTN-LSILTSKDFEAFQALQHLH 989
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
L +NRI +S + L+NL TLDLS N L L ++ + L+ L+ L + N + +
Sbjct: 990 LVNNRITRISPGAFKSLTNLLTLDLSVNELEMLPKERLQGLRLLRFLNISHNTLKDLEEF 1049
Query: 126 VIGDNVTITTLTLS 139
+ D + + TL LS
Sbjct: 1050 SV-DLLEMQTLDLS 1062
Score = 130 (50.8 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 37/117 (31%), Positives = 63/117 (53%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
SSL+ LSI + + + + AL+ + KLT+L +N+I ++D+SF L +S L++ NR
Sbjct: 147 SSLESLSIVNGKLTQMPSRALSSMQKLTALDFDYNEIVRVDDYSFYGLR-ISKLNMKGNR 205
Query: 71 IVAVSGASLAHLSN-LTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDV 126
+ + + A L + +D+S N LR + L L+ LRL +N I D+
Sbjct: 206 LQGMPEHAFAGLEECMQEIDVSENGLRTFPLMALRKLDHLRILRLSNNRIPTFYGDI 262
Score = 129 (50.5 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 37/128 (28%), Positives = 61/128 (47%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L+ K L + N+ S AL L L SL NQ+ ++ L L L N
Sbjct: 812 LNVFKELRLCRNELSDFPHIALYNLSTLESLDLARNQLASIDFFKLSGTLNLRQLILRDN 871
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+I A+SG + +L+ L ++DLS N L +L + + +LQ++ L +N + + D
Sbjct: 872 KITALSGFNAVNLTQLDSVDLSGNLLLSLPANFLRHSINLQKVHLSNNRFLQIPSSALSD 931
Query: 130 NVTITTLT 137
V+I L+
Sbjct: 932 -VSIPRLS 938
Score = 128 (50.1 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 39/136 (28%), Positives = 70/136 (51%)
Query: 9 RLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 68
+L +LK L ++HN + R + L SL+ + + LE H+F++L+ L+ L+L
Sbjct: 663 KLKNLKSLDLSHNPLVQLTRDIFSNEFPLNSLNLGNCSLRKLEQHAFKSLTNLNELNLER 722
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHN-FLRA----LTQDLITPLKSLQELRLDDNDISMVT 123
N++ +L + NL L LSHN F A + ++ L+SLQ+L + + + +
Sbjct: 723 NQLNPADIQTL-DIPNLRRLLLSHNNFSYAGSVGIMAGMLDRLRSLQQLSMSNCSLGQI- 780
Query: 124 PDVI-GDNVTITTLTL 138
PD++ N + L L
Sbjct: 781 PDLLFAKNTNLVRLDL 796
Score = 123 (48.4 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 34/111 (30%), Positives = 57/111 (51%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L+ L+I+HN + ++ L+ T L NQ+D + +FR L L L L N
Sbjct: 1030 LRLLRFLNISHNTLKDLEEFSVDLLEMQT-LDLSFNQLDRISKKTFRNLHGLLELFLMGN 1088
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKS-LQELRLDDNDI 119
R+ +S + L L LDL N+ + + + PL++ L+ LRL++N +
Sbjct: 1089 RMTVLSNDAFRFLRKLHVLDLRKNYFELVPLEPLRPLETNLRTLRLEENPL 1139
Score = 113 (44.8 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 33/104 (31%), Positives = 52/104 (50%)
Query: 36 KLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFL 95
KLTSLS +N+I LE FR L L + L +NRI V L +L L + N +
Sbjct: 450 KLTSLSLDNNEIQDLEIGMFRKLEHLREVRLHNNRIRRVRRGVFEPLPSLQELHIQKNSI 509
Query: 96 RALTQDLITPLKSLQELRLDDNDISMVTPDVIGD-NVTITTLTL 138
+ L+++Q + L DN ++ V D+ D N ++ ++ L
Sbjct: 510 EDIEPQAFHTLENMQHINLQDNQLT-VLEDIFPDENSSLLSVQL 552
Score = 113 (44.8 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 31/114 (27%), Positives = 59/114 (51%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
+L+ L + +N+ + + GA L L +L N++++L + L L L+++HN +
Sbjct: 984 ALQHLHLVNNRITRISPGAFKSLTNLLTLDLSVNELEMLPKERLQGLRLLRFLNISHNTL 1043
Query: 72 VAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
+ S+ L + TLDLS N L +++ L L EL L N +++++ D
Sbjct: 1044 KDLEEFSV-DLLEMQTLDLSFNQLDRISKKTFRNLHGLLELFLMGNRMTVLSND 1096
Score = 109 (43.4 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 37/129 (28%), Positives = 55/129 (42%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
SSL + + N V + K+ + NQ+ +E F L L L+ N+
Sbjct: 545 SSLLSVQLEANYLHKVHPRTFSRQQKVQIMWLKDNQLTRVERSFFADTPQLGRLYLSDNK 604
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDN 130
I + + +L L LDLS N LR L +D PL+ L+EL L N I +
Sbjct: 605 IRDIEKDTFVNLLLLQFLDLSGNQLRQLRRDYFAPLQDLEELSLARNHIEAIEGYAFAKL 664
Query: 131 VTITTLTLS 139
+ +L LS
Sbjct: 665 KNLKSLDLS 673
Score = 107 (42.7 bits), Expect = 0.00015, P = 0.00015
Identities = 33/115 (28%), Positives = 55/115 (47%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
+ L++L L ++ N+ + + L GL L L+ HN + LE+ S L + LDL+
Sbjct: 1004 KSLTNLLTLDLSVNELEMLPKERLQGLRLLRFLNISHNTLKDLEEFSVDLLE-MQTLDLS 1062
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
N++ +S + +L L L L N + L+ D L+ L L L N +V
Sbjct: 1063 FNQLDRISKKTFRNLHGLLELFLMGNRMTVLSNDAFRFLRKLHVLDLRKNYFELV 1117
>MGI|MGI:2136810 [details] [associations]
symbol:Lrfn1 "leucine rich repeat and fibronectin type III
domain containing 1" species:10090 "Mus musculus" [GO:0005886
"plasma membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 MGI:MGI:2136810 GO:GO:0016021 GO:GO:0005886
GO:GO:0014069 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030054
GO:GO:0045211 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 HSSP:P21809 MEROPS:I43.001
CTD:57622 eggNOG:NOG291271 HOGENOM:HOG000237343 HOVERGEN:HBG052352
KO:K16354 OMA:PRVSHVC OrthoDB:EOG4TMR1K EMBL:AB243740 EMBL:DQ070870
EMBL:DQ314497 EMBL:AK090175 EMBL:BC004018 IPI:IPI00468602
IPI:IPI00855061 IPI:IPI00895406 RefSeq:NP_001135393.1
RefSeq:NP_085039.2 UniGene:Mm.483073 ProteinModelPortal:Q2WF71
SMR:Q2WF71 IntAct:Q2WF71 STRING:Q2WF71 PhosphoSite:Q2WF71
PaxDb:Q2WF71 PRIDE:Q2WF71 Ensembl:ENSMUST00000055110
Ensembl:ENSMUST00000108288 GeneID:80749 KEGG:mmu:80749
UCSC:uc009fza.1 UCSC:uc009fzb.2 UCSC:uc009fzc.2
GeneTree:ENSGT00660000095307 InParanoid:Q2WF71 NextBio:350107
Bgee:Q2WF71 Genevestigator:Q2WF71 Uniprot:Q2WF71
Length = 766
Score = 153 (58.9 bits), Expect = 8.1e-11, Sum P(2) = 8.1e-11
Identities = 38/117 (32%), Positives = 60/117 (51%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRA-LSTLSHLDLAH 68
L +L+ L + N+ + VR L GL L L +NQI +E +F A LST+ LDL++
Sbjct: 112 LRALRALHLDSNRLAEVRGDQLRGLGNLRHLILGNNQIRKVESAAFDAFLSTVEDLDLSY 171
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
N + A+ ++ + NL TL L HN + + + L L L + N + + PD
Sbjct: 172 NNLEALPWEAVGQMVNLNTLTLDHNLIDHIAEGTFVQLHKLVRLDMTSNRLHKLPPD 228
Score = 142 (55.0 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 39/114 (34%), Positives = 58/114 (50%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
++SL L+++ N V GA A L L +L N++ + R L L HL L +N
Sbjct: 88 MTSLVHLTLSRNTIGQVAAGAFADLRALRALHLDSNRLAEVRGDQLRGLGNLRHLILGNN 147
Query: 70 RIVAVSGASL-AHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
+I V A+ A LS + LDLS+N L AL + + + +L L LD N I +
Sbjct: 148 QIRKVESAAFDAFLSTVEDLDLSYNNLEALPWEAVGQMVNLNTLTLDHNLIDHI 201
Score = 126 (49.4 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 37/124 (29%), Positives = 58/124 (46%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
L + N ++VRR A + L L+ N I + +F L L L L NR+ V
Sbjct: 70 LRLTDNFIAAVRRRDFANMTSLVHLTLSRNTIGQVAAGAFADLRALRALHLDSNRLAEVR 129
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITP-LKSLQELRLDDNDISMVTPDVIGDNVTIT 134
G L L NL L L +N +R + L ++++L L N++ + + +G V +
Sbjct: 130 GDQLRGLGNLRHLILGNNQIRKVESAAFDAFLSTVEDLDLSYNNLEALPWEAVGQMVNLN 189
Query: 135 TLTL 138
TLTL
Sbjct: 190 TLTL 193
Score = 33 (16.7 bits), Expect = 8.1e-11, Sum P(2) = 8.1e-11
Identities = 8/11 (72%), Positives = 9/11 (81%)
Query: 130 NVTITTLTLSG 140
+VTITTL SG
Sbjct: 356 DVTITTLRDSG 366
>RGD|1304707 [details] [associations]
symbol:Lrfn1 "leucine rich repeat and fibronectin type III
domain containing 1" species:10116 "Rattus norvegicus" [GO:0005886
"plasma membrane" evidence=IEA] [GO:0014069 "postsynaptic density"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
PROSITE:PS51450 SMART:SM00060 RGD:1304707 GO:GO:0016021
GO:GO:0005886 GO:GO:0014069 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 GO:GO:0045211 SUPFAM:SSF49265 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 CTD:57622
eggNOG:NOG291271 HOGENOM:HOG000237343 HOVERGEN:HBG052352 KO:K16354
OMA:PRVSHVC OrthoDB:EOG4TMR1K GeneTree:ENSGT00660000095307
EMBL:AABR03001365 IPI:IPI00360897 RefSeq:NP_001121166.1
UniGene:Rn.87338 ProteinModelPortal:P0C7J6
Ensembl:ENSRNOT00000057073 GeneID:365222 KEGG:rno:365222
UCSC:RGD:1304707 NextBio:686907 ArrayExpress:P0C7J6
Genevestigator:P0C7J6 Uniprot:P0C7J6
Length = 766
Score = 153 (58.9 bits), Expect = 8.1e-11, Sum P(2) = 8.1e-11
Identities = 38/117 (32%), Positives = 60/117 (51%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRA-LSTLSHLDLAH 68
L +L+ L + N+ + VR L GL L L +NQI +E +F A LST+ LDL++
Sbjct: 112 LRALRALHLDSNRLAEVRGDQLRGLGNLRHLILGNNQIRKVESAAFDAFLSTVEDLDLSY 171
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
N + A+ ++ + NL TL L HN + + + L L L + N + + PD
Sbjct: 172 NNLEALPWEAVGQMVNLNTLTLDHNLIDHIAEGTFVQLHKLVRLDMTSNRLHKLPPD 228
Score = 142 (55.0 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 39/114 (34%), Positives = 58/114 (50%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
++SL L+++ N V GA A L L +L N++ + R L L HL L +N
Sbjct: 88 MTSLVHLTLSRNTIGQVAAGAFADLRALRALHLDSNRLAEVRGDQLRGLGNLRHLILGNN 147
Query: 70 RIVAVSGASL-AHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
+I V A+ A LS + LDLS+N L AL + + + +L L LD N I +
Sbjct: 148 QIRKVESAAFDAFLSTVEDLDLSYNNLEALPWEAVGQMVNLNTLTLDHNLIDHI 201
Score = 126 (49.4 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 37/124 (29%), Positives = 58/124 (46%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
L + N ++VRR A + L L+ N I + +F L L L L NR+ V
Sbjct: 70 LRLTDNFIAAVRRRDFANMTSLVHLTLSRNTIGQVAAGAFADLRALRALHLDSNRLAEVR 129
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITP-LKSLQELRLDDNDISMVTPDVIGDNVTIT 134
G L L NL L L +N +R + L ++++L L N++ + + +G V +
Sbjct: 130 GDQLRGLGNLRHLILGNNQIRKVESAAFDAFLSTVEDLDLSYNNLEALPWEAVGQMVNLN 189
Query: 135 TLTL 138
TLTL
Sbjct: 190 TLTL 193
Score = 33 (16.7 bits), Expect = 8.1e-11, Sum P(2) = 8.1e-11
Identities = 8/11 (72%), Positives = 9/11 (81%)
Query: 130 NVTITTLTLSG 140
+VTITTL SG
Sbjct: 356 DVTITTLRDSG 366
>UNIPROTKB|Q8TF66 [details] [associations]
symbol:LRRC15 "Leucine-rich repeat-containing protein 15"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
GO:GO:0016021 EMBL:CH471052 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 EMBL:AC125362
EMBL:AC174158 EMBL:AB071037 EMBL:BC101064 EMBL:BC101065
EMBL:BK001325 IPI:IPI00152871 IPI:IPI00913924 RefSeq:NP_001128529.2
RefSeq:NP_570843.2 UniGene:Hs.288467 ProteinModelPortal:Q8TF66
SMR:Q8TF66 IntAct:Q8TF66 STRING:Q8TF66 PhosphoSite:Q8TF66
DMDM:30794642 PaxDb:Q8TF66 PeptideAtlas:Q8TF66 PRIDE:Q8TF66
Ensembl:ENST00000347624 Ensembl:ENST00000428839
Ensembl:ENST00000439944 GeneID:131578 KEGG:hsa:131578
UCSC:uc003ftt.3 UCSC:uc003ftu.3 CTD:131578 GeneCards:GC03M194075
H-InvDB:HIX0003982 HGNC:HGNC:20818 HPA:HPA035503 neXtProt:NX_Q8TF66
PharmGKB:PA134956867 HOGENOM:HOG000040004 HOVERGEN:HBG052343
InParanoid:Q8TF66 OMA:NHLEYIP OrthoDB:EOG4QVCCN ChiTaRS:LRRC15
GenomeRNAi:131578 NextBio:82942 Bgee:Q8TF66 CleanEx:HS_LRRC15
Genevestigator:Q8TF66 GermOnline:ENSG00000172061 Uniprot:Q8TF66
Length = 581
Score = 160 (61.4 bits), Expect = 8.9e-11, P = 8.9e-11
Identities = 39/108 (36%), Positives = 59/108 (54%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L+VL ++ NQ S + GA GL +L LS H N + L+ + FR L+ L ++ L +N
Sbjct: 316 LRQLQVLILSRNQISFISPGAFNGLTELRELSLHTNALQDLDGNVFRMLANLQNISLQNN 375
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
R+ + G A+++ L + L +N L L + L L ELRL DN
Sbjct: 376 RLRQLPGNIFANVNGLMAIQLQNNQLENLPLGIFDHLGKLCELRLYDN 423
Score = 151 (58.2 bits), Expect = 8.3e-10, P = 8.3e-10
Identities = 39/130 (30%), Positives = 61/130 (46%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L SL+ L ++ NQ ++ + L L H N ++ + D +F L L+ L+L N
Sbjct: 124 LDSLESLLLSSNQLLQIQPAHFSQCSNLKELQLHGNHLEYIPDGAFDHLVGLTKLNLGKN 183
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+ +S HL NL L L N L + L +LQEL L N I +++P + +
Sbjct: 184 SLTHISPRVFQHLGNLQVLRLYENRLTDIPMGTFDGLVNLQELALQQNQIGLLSPGLFHN 243
Query: 130 NVTITTLTLS 139
N + L LS
Sbjct: 244 NHNLQRLYLS 253
Score = 148 (57.2 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 43/121 (35%), Positives = 60/121 (49%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
R L SL+ LS+A+N+ + G GLD L SL NQ+ ++ F S L L L
Sbjct: 98 RNLGSLRYLSLANNKLQVLPIGLFQGLDSLESLLLSSNQLLQIQPAHFSQCSNLKELQLH 157
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN---DISMVTP 124
N + + + HL LT L+L N L ++ + L +LQ LRL +N DI M T
Sbjct: 158 GNHLEYIPDGAFDHLVGLTKLNLGKNSLTHISPRVFQHLGNLQVLRLYENRLTDIPMGTF 217
Query: 125 D 125
D
Sbjct: 218 D 218
Score = 143 (55.4 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 42/133 (31%), Positives = 65/133 (48%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
+ L +L+VL + N+ + + G GL L L+ NQI +L F L L L+
Sbjct: 194 QHLGNLQVLRLYENRLTDIPMGTFDGLVNLQELALQQNQIGLLSPGLFHNNHNLQRLYLS 253
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI 127
+N I + + L L L L N L+ L+ + P+ +L+EL L DN IS + PD +
Sbjct: 254 NNHISQLPPSVFMQLPQLNRLTLFGNSLKELSPGIFGPMPNLRELWLYDNHISSL-PDNV 312
Query: 128 GDNVT-ITTLTLS 139
N+ + L LS
Sbjct: 313 FSNLRQLQVLILS 325
Score = 136 (52.9 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 36/117 (30%), Positives = 57/117 (48%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
+S+L L I N+ S + GA L L LS +N++ VL F+ L +L L L+ N
Sbjct: 76 ISALIALRIEKNELSRITPGAFRNLGSLRYLSLANNKLQVLPIGLFQGLDSLESLLLSSN 135
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDV 126
+++ + A + SNL L L N L + L L +L L N ++ ++P V
Sbjct: 136 QLLQIQPAHFSQCSNLKELQLHGNHLEYIPDGAFDHLVGLTKLNLGKNSLTHISPRV 192
Score = 123 (48.4 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 40/130 (30%), Positives = 56/130 (43%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
S+LK L + N + GA L LT L+ N + + F+ L L L L NR
Sbjct: 149 SNLKELQLHGNHLEYIPDGAFDHLVGLTKLNLGKNSLTHISPRVFQHLGNLQVLRLYENR 208
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDN 130
+ + + L NL L L N + L+ L +LQ L L +N IS + P V
Sbjct: 209 LTDIPMGTFDGLVNLQELALQQNQIGLLSPGLFHNNHNLQRLYLSNNHISQLPPSVFMQL 268
Query: 131 VTITTLTLSG 140
+ LTL G
Sbjct: 269 PQLNRLTLFG 278
Score = 110 (43.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 29/110 (26%), Positives = 51/110 (46%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
+ +L+ L + N SS+ + L +L L NQI + +F L+ L L L N
Sbjct: 292 MPNLRELWLYDNHISSLPDNVFSNLRQLQVLILSRNQISFISPGAFNGLTELRELSLHTN 351
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
+ + G L+NL + L +N LR L ++ + L ++L +N +
Sbjct: 352 ALQDLDGNVFRMLANLQNISLQNNRLRQLPGNIFANVNGLMAIQLQNNQL 401
Score = 110 (43.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 35/129 (27%), Positives = 55/129 (42%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L +L+ L++ NQ + G L L +N I L F L L+ L L N
Sbjct: 220 LVNLQELALQQNQIGLLSPGLFHNNHNLQRLYLSNNHISQLPPSVFMQLPQLNRLTLFGN 279
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+ +S + NL L L N + +L ++ + L+ LQ L L N IS ++P
Sbjct: 280 SLKELSPGIFGPMPNLRELWLYDNHISSLPDNVFSNLRQLQVLILSRNQISFISPGAFNG 339
Query: 130 NVTITTLTL 138
+ L+L
Sbjct: 340 LTELRELSL 348
Score = 104 (41.7 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 35/123 (28%), Positives = 55/123 (44%)
Query: 9 RLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 68
+L L L++ N + G + L L + N I L D+ F L L L L+
Sbjct: 267 QLPQLNRLTLFGNSLKELSPGIFGPMPNLRELWLYDNHISSLPDNVFSNLRQLQVLILSR 326
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
N+I +S + L+ L L L N L+ L ++ L +LQ + L +N + + P I
Sbjct: 327 NQISFISPGAFNGLTELRELSLHTNALQDLDGNVFRMLANLQNISLQNNRLRQL-PGNIF 385
Query: 129 DNV 131
NV
Sbjct: 386 ANV 388
Score = 103 (41.3 bits), Expect = 0.00012, P = 0.00012
Identities = 32/124 (25%), Positives = 58/124 (46%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
L I + + + + L +L N++ + +FR L +L +L LA+N++ +
Sbjct: 58 LQILNTHITELNESPFLNISALIALRIEKNELSRITPGAFRNLGSLRYLSLANNKLQVLP 117
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDN-VTIT 134
L +L +L LS N L + + +L+EL+L N + + PD D+ V +T
Sbjct: 118 IGLFQGLDSLESLLLSSNQLLQIQPAHFSQCSNLKELQLHGNHLEYI-PDGAFDHLVGLT 176
Query: 135 TLTL 138
L L
Sbjct: 177 KLNL 180
>UNIPROTKB|O15335 [details] [associations]
symbol:CHAD "Chondroadherin" species:9606 "Homo sapiens"
[GO:0001502 "cartilage condensation" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=TAS] [GO:0005201
"extracellular matrix structural constituent" evidence=NAS]
[GO:0001558 "regulation of cell growth" evidence=NAS] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0001558 GO:GO:0005578
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 EMBL:CH471109 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0001502 GO:GO:0005201 CTD:1101
HOGENOM:HOG000013150 HOVERGEN:HBG005324 KO:K06248 EMBL:U96769
EMBL:U96767 EMBL:U96768 EMBL:AF371328 EMBL:AK292177 EMBL:BC036360
EMBL:BC073974 IPI:IPI00014592 RefSeq:NP_001258.2 UniGene:Hs.97220
ProteinModelPortal:O15335 SMR:O15335 STRING:O15335 PRIDE:O15335
Ensembl:ENST00000258969 Ensembl:ENST00000508540 GeneID:1101
KEGG:hsa:1101 UCSC:uc010dbr.3 GeneCards:GC17M048541 HGNC:HGNC:1909
HPA:HPA018241 MIM:602178 neXtProt:NX_O15335 PharmGKB:PA26445
InParanoid:O15335 OMA:CHCHGGD PhylomeDB:O15335 GenomeRNAi:1101
NextBio:4554 Bgee:O15335 CleanEx:HS_CHAD Genevestigator:O15335
GermOnline:ENSG00000136457 Uniprot:O15335
Length = 359
Score = 156 (60.0 bits), Expect = 9.6e-11, P = 9.6e-11
Identities = 41/122 (33%), Positives = 61/122 (50%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
R + +L L + H Q V GA GL +L L HN I VL +F L+ L++L L
Sbjct: 72 RAMPNLVSLHLQHCQIREVAAGAFRGLKQLIYLYLSHNDIRVLRAGAFDDLTELTYLYLD 131
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI 127
HN++ + L+ L NL L L++N +R L K L+ L L +N +S + P +
Sbjct: 132 HNKVTELPRGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDLRWLYLSENALSSLQPGAL 191
Query: 128 GD 129
D
Sbjct: 192 DD 193
Score = 138 (53.6 bits), Expect = 9.0e-09, P = 9.0e-09
Identities = 35/106 (33%), Positives = 56/106 (52%)
Query: 14 KVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVA 73
K+L++ N F + + + L SL H QI + +FR L L +L L+HN I
Sbjct: 54 KLLNLQRNNFPVLAANSFRAMPNLVSLHLQHCQIREVAAGAFRGLKQLIYLYLSHNDIRV 113
Query: 74 VSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
+ + L+ LT L L HN + L + L++PL +L L+L++N I
Sbjct: 114 LRAGAFDDLTELTYLYLDHNKVTELPRGLLSPLVNLFILQLNNNKI 159
Score = 117 (46.2 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 31/116 (26%), Positives = 58/116 (50%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L+ L L + HN+ + + RG L+ L L L ++N+I L +F+ L L L+ N
Sbjct: 122 LTELTYLYLDHNKVTELPRGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDLRWLYLSEN 181
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
+ ++ +L + NL + N L + ++ L+ ++EL+L N + + PD
Sbjct: 182 ALSSLQPGALDDVENLAKFHVDRNQLSSYPSAALSKLRVVEELKLSHNPLKSI-PD 236
Score = 113 (44.8 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 33/105 (31%), Positives = 48/105 (45%)
Query: 35 DKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNF 94
+K L+ N VL +SFRA+ L L L H +I V+ + L L L LSHN
Sbjct: 51 EKTKLLNLQRNNFPVLAANSFRAMPNLVSLHLQHCQIREVAAGAFRGLKQLIYLYLSHND 110
Query: 95 LRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTLTLS 139
+R L L L L LD N ++ + ++ V + L L+
Sbjct: 111 IRVLRAGAFDDLTELTYLYLDHNKVTELPRGLLSPLVNLFILQLN 155
Score = 113 (44.8 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 36/132 (27%), Positives = 57/132 (43%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
R L L L ++HN +R GA L +LT L HN++ L L L L L
Sbjct: 96 RGLKQLIYLYLSHNDIRVLRAGAFDDLTELTYLYLDHNKVTELPRGLLSPLVNLFILQLN 155
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI 127
+N+I + + +L L LS N L +L + +++L + +D N +S +
Sbjct: 156 NNKIRELRAGAFQGAKDLRWLYLSENALSSLQPGALDDVENLAKFHVDRNQLSSYPSAAL 215
Query: 128 GDNVTITTLTLS 139
+ L LS
Sbjct: 216 SKLRVVEELKLS 227
>UNIPROTKB|F1NG27 [details] [associations]
symbol:TLR3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0002756 "MyD88-independent toll-like receptor signaling
pathway" evidence=IEA] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0004888 "transmembrane signaling receptor
activity" evidence=IEA] [GO:0034138 "toll-like receptor 3 signaling
pathway" evidence=IEA] [GO:0045087 "innate immune response"
evidence=IEA] [GO:0050729 "positive regulation of inflammatory
response" evidence=IEA] [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007252 "I-kappaB
phosphorylation" evidence=IEA] [GO:0032722 "positive regulation of
chemokine production" evidence=IEA] [GO:0032728 "positive
regulation of interferon-beta production" evidence=IEA] [GO:0032735
"positive regulation of interleukin-12 production" evidence=IEA]
[GO:0032755 "positive regulation of interleukin-6 production"
evidence=IEA] [GO:0032757 "positive regulation of interleukin-8
production" evidence=IEA] [GO:0032760 "positive regulation of tumor
necrosis factor production" evidence=IEA] [GO:0034123 "positive
regulation of toll-like receptor signaling pathway" evidence=IEA]
[GO:0034346 "positive regulation of type III interferon production"
evidence=IEA] [GO:0042346 "positive regulation of NF-kappaB import
into nucleus" evidence=IEA] [GO:0043123 "positive regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA] [GO:0043330
"response to exogenous dsRNA" evidence=IEA] [GO:0045078 "positive
regulation of interferon-gamma biosynthetic process" evidence=IEA]
[GO:0045080 "positive regulation of chemokine biosynthetic process"
evidence=IEA] [GO:0045356 "positive regulation of interferon-alpha
biosynthetic process" evidence=IEA] [GO:0045359 "positive
regulation of interferon-beta biosynthetic process" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0046330 "positive
regulation of JNK cascade" evidence=IEA] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=IEA] [GO:0071260 "cellular response to mechanical
stimulus" evidence=IEA] InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 GO:GO:0016021 GO:GO:0005737 GO:GO:0006952
GO:GO:0043123 GO:GO:0046330 GO:GO:0045944 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0032722
GO:GO:0032755 GO:GO:0051092 GO:GO:0032757 GO:GO:0071260
InterPro:IPR000372 SMART:SM00013 GO:GO:0032760 GO:GO:0043330
GO:GO:0032735 GO:GO:0042346 GO:GO:0045078 GO:GO:0032728
GO:GO:0007252 GO:GO:0045080 SUPFAM:SSF52200 GO:GO:0045359
GeneTree:ENSGT00680000099674 GO:GO:0034123 PANTHER:PTHR24365:SF5
GO:GO:0045356 GO:GO:0034346 OMA:LNLGYNI EMBL:AADN02031435
IPI:IPI00590386 Ensembl:ENSGALT00000021952 Uniprot:F1NG27
Length = 900
Score = 162 (62.1 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 45/131 (34%), Positives = 67/131 (51%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
S+L L+ +N S ++ G L L L HNQ+ L D F + S L+ L+L +N
Sbjct: 80 SNLIYLNAGYNIISKLKPGLCKNLPLLQILKLEHNQLHELPDGVFASCSNLTELNLGYN- 138
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG-- 128
I+ V L NL LDLSHN L++ L LK+L+EL L N I+ + + +
Sbjct: 139 IIEVKNDPFKTLENLNILDLSHNHLKSANLGLQQQLKNLRELVLYSNQITELNKEDLKFL 198
Query: 129 DNVTITTLTLS 139
N ++ +L LS
Sbjct: 199 SNTSLNSLDLS 209
Score = 145 (56.1 bits), Expect = 6.7e-09, P = 6.7e-09
Identities = 39/124 (31%), Positives = 67/124 (54%)
Query: 5 CTVRRLSSLKVLSIAHNQFSSVRRGALAGLD--KLTSLSCHHNQIDVLEDHSFRALSTLS 62
CT ++++ LS++H + S + R L GL LT L+ N + V+ED SF+ LS L
Sbjct: 246 CTELSDTAIQNLSLSHVKLSHINRLTLQGLQGTNLTVLNLSKNSLSVIEDDSFQWLSKLE 305
Query: 63 HLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
+L+L N I+ VS LS++T L+L ++ + L L+ L +D+N+ +
Sbjct: 306 YLNLEDNNIINVSSHLFYGLSSITHLNLINSLTGKIEDFSFQWLHHLEYLIMDNNNFPRI 365
Query: 123 TPDV 126
T ++
Sbjct: 366 TTNM 369
Score = 129 (50.5 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 36/113 (31%), Positives = 55/113 (48%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
+ L L++L + HNQ + G A LT L+ +N I+V D F+ L L+ LDL+
Sbjct: 101 KNLPLLQILKLEHNQLHELPDGVFASCSNLTELNLGYNIIEVKND-PFKTLENLNILDLS 159
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
HN + + + L NL L L N + L ++ LK L L+ D+S
Sbjct: 160 HNHLKSANLGLQQQLKNLRELVLYSNQITELNKE---DLKFLSNTSLNSLDLS 209
Score = 115 (45.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/104 (28%), Positives = 54/104 (51%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
++L VL+++ N S + + L KL L+ N I + H F LS+++HL+L ++
Sbjct: 278 TNLTVLNLSKNSLSVIEDDSFQWLSKLEYLNLEDNNIINVSSHLFYGLSSITHLNLINSL 337
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRL 114
+ S L +L L + +N +T ++ T LK+L+ L L
Sbjct: 338 TGKIEDFSFQWLHHLEYLIMDNNNFPRITTNMFTGLKNLKYLSL 381
Score = 108 (43.1 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 38/135 (28%), Positives = 65/135 (48%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLS-----HLD 65
+SL L ++ N G L + L L N +++ E+ + + + LS +L
Sbjct: 201 TSLNSLDLSSNPLKEFHTGCLHAIGNLFGLIL--NNVELGENRTKKLCTELSDTAIQNLS 258
Query: 66 LAHNRIVAVSGASLAHL--SNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVT 123
L+H ++ ++ +L L +NLT L+LS N L + D L L+ L L+DN+I V+
Sbjct: 259 LSHVKLSHINRLTLQGLQGTNLTVLNLSKNSLSVIEDDSFQWLSKLEYLNLEDNNIINVS 318
Query: 124 PDVIGDNVTITTLTL 138
+ +IT L L
Sbjct: 319 SHLFYGLSSITHLNL 333
Score = 106 (42.4 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 33/120 (27%), Positives = 62/120 (51%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDV-LEDHSFRALSTLSHLDLAHN 69
S L+VL++ + S+V A + L +L L N+I+ L H F L+ + ++ L++N
Sbjct: 402 SRLQVLNLTKTRISTVESEAFSSLGQLKILDLGLNEINQELTGHEFEGLNNIEYIYLSYN 461
Query: 70 RIVAVSGASLAHLSNLTTLDLSH---NFLRALTQDLITPLKSLQELRLDDNDISMVTPDV 126
+ V + S + +L L L N L A++ PL++L L + +N+I+ + D+
Sbjct: 462 KNVTLRSESFIFVPSLRKLMLRKVGCNNL-AISPSPFHPLRNLTVLDISNNNIANIREDL 520
Score = 104 (41.7 bits), Expect = 0.00016, P = 0.00016
Identities = 33/115 (28%), Positives = 55/115 (47%)
Query: 10 LSSLKVLSIAHNQFSSVRRG-ALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 68
L LK+L + N+ + G GL+ + + +N+ L SF + +L L L
Sbjct: 425 LGQLKILDLGLNEINQELTGHEFEGLNNIEYIYLSYNKNVTLRSESFIFVPSLRKLMLRK 484
Query: 69 ---NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
N + A+S + L NLT LD+S+N + + +DL L L L L N+++
Sbjct: 485 VGCNNL-AISPSPFHPLRNLTVLDISNNNIANIREDLFNGLHELDILNLQHNNLA 538
Score = 104 (41.7 bits), Expect = 0.00016, P = 0.00016
Identities = 40/139 (28%), Positives = 64/139 (46%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL--EDHSFRALSTLSHLD 65
+ L +L +L ++HN S G L L L + NQI L ED F + ++L+ LD
Sbjct: 148 KTLENLNILDLSHNHLKSANLGLQQQLKNLRELVLYSNQITELNKEDLKFLSNTSLNSLD 207
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFL-RALTQDLITPLK--SLQELRLDDNDISMV 122
L+ N + L + NL L L++ L T+ L T L ++Q L L +S +
Sbjct: 208 LSSNPLKEFHTGCLHAIGNLFGLILNNVELGENRTKKLCTELSDTAIQNLSLSHVKLSHI 267
Query: 123 TPDVI----GDNVTITTLT 137
+ G N+T+ L+
Sbjct: 268 NRLTLQGLQGTNLTVLNLS 286
>UNIPROTKB|Q9P244 [details] [associations]
symbol:LRFN1 "Leucine-rich repeat and fibronectin type III
domain-containing protein 1" species:9606 "Homo sapiens"
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060 GO:GO:0016021
GO:GO:0005886 GO:GO:0014069 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 GO:GO:0045211 SUPFAM:SSF49265 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 HSSP:P56276
MEROPS:I43.001 EMBL:AC011445 EMBL:AB040917 EMBL:BC025310
IPI:IPI00793456 RefSeq:NP_065913.1 UniGene:Hs.97860
ProteinModelPortal:Q9P244 SMR:Q9P244 IntAct:Q9P244 STRING:Q9P244
PhosphoSite:Q9P244 DMDM:189028858 PaxDb:Q9P244 PRIDE:Q9P244
Ensembl:ENST00000248668 GeneID:57622 KEGG:hsa:57622 UCSC:uc002okw.2
CTD:57622 GeneCards:GC19M039798 H-InvDB:HIX0015112 HGNC:HGNC:29290
HPA:HPA017383 MIM:612807 neXtProt:NX_Q9P244 PharmGKB:PA134871732
eggNOG:NOG291271 HOGENOM:HOG000237343 HOVERGEN:HBG052352
InParanoid:Q9P244 KO:K16354 OMA:PRVSHVC OrthoDB:EOG4TMR1K
GenomeRNAi:57622 NextBio:64302 Bgee:Q9P244 CleanEx:HS_LRFN1
Genevestigator:Q9P244 Uniprot:Q9P244
Length = 771
Score = 152 (58.6 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 38/117 (32%), Positives = 60/117 (51%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRA-LSTLSHLDLAH 68
L +L+ L + N+ + VR L GL L L +NQI +E +F A LST+ LDL++
Sbjct: 112 LRALRALHLDSNRLAEVRGDQLRGLGNLRHLILGNNQIRRVESAAFDAFLSTVEDLDLSY 171
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
N + A+ ++ + NL TL L HN + + + L L L + N + + PD
Sbjct: 172 NNLEALPWEAVGQMVNLNTLTLDHNLIDHIAEGTFVQLHKLVRLDMTSNRLHKLPPD 228
Score = 142 (55.0 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 39/114 (34%), Positives = 58/114 (50%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
++SL L+++ N V GA A L L +L N++ + R L L HL L +N
Sbjct: 88 MTSLVHLTLSRNTIGQVAAGAFADLRALRALHLDSNRLAEVRGDQLRGLGNLRHLILGNN 147
Query: 70 RIVAVSGASL-AHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
+I V A+ A LS + LDLS+N L AL + + + +L L LD N I +
Sbjct: 148 QIRRVESAAFDAFLSTVEDLDLSYNNLEALPWEAVGQMVNLNTLTLDHNLIDHI 201
Score = 126 (49.4 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 37/124 (29%), Positives = 58/124 (46%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
L + N ++VRR A + L L+ N I + +F L L L L NR+ V
Sbjct: 70 LRLTDNFIAAVRRRDFANMTSLVHLTLSRNTIGQVAAGAFADLRALRALHLDSNRLAEVR 129
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITP-LKSLQELRLDDNDISMVTPDVIGDNVTIT 134
G L L NL L L +N +R + L ++++L L N++ + + +G V +
Sbjct: 130 GDQLRGLGNLRHLILGNNQIRRVESAAFDAFLSTVEDLDLSYNNLEALPWEAVGQMVNLN 189
Query: 135 TLTL 138
TLTL
Sbjct: 190 TLTL 193
Score = 33 (16.7 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 8/11 (72%), Positives = 9/11 (81%)
Query: 130 NVTITTLTLSG 140
+VTITTL SG
Sbjct: 356 DVTITTLRDSG 366
>UNIPROTKB|A4IFA6 [details] [associations]
symbol:ISLR "Immunoglobulin superfamily containing
leucine-rich repeat protein" species:9913 "Bos taurus" [GO:0005576
"extracellular region" evidence=IEA] InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0005576
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 eggNOG:NOG240332 OrthoDB:EOG4QC14W
GeneTree:ENSGT00700000104028 EMBL:BC134481 IPI:IPI00685291
RefSeq:NP_001074198.1 UniGene:Bt.1899 ProteinModelPortal:A4IFA6
PRIDE:A4IFA6 Ensembl:ENSBTAT00000007913 GeneID:515018
KEGG:bta:515018 CTD:3671 HOGENOM:HOG000113109 HOVERGEN:HBG100853
InParanoid:A4IFA6 OMA:HGKAVEG NextBio:20871625 Uniprot:A4IFA6
Length = 428
Score = 157 (60.3 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 38/110 (34%), Positives = 55/110 (50%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
R + L+ L +AHN+ SV GALA L +L SL HN I +LS L L +
Sbjct: 71 REVPRLQSLWLAHNEIRSVAAGALASLSQLKSLDLSHNLISDFAWSDLHSLSALQLLKMD 130
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
N + + + L L +L L+HN L L + PL +L L+++DN
Sbjct: 131 SNELTFIPRDAFRSLRALRSLQLNHNRLHTLAEGTFAPLTALSHLQINDN 180
Score = 152 (58.6 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 40/125 (32%), Positives = 64/125 (51%)
Query: 15 VLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAV 74
+ A+ +V G A + T+LS NQ+ L +FR + L L LAHN I +V
Sbjct: 33 IADCAYRDLQAVPSGFPANV---TTLSLSANQLPSLPGGAFREVPRLQSLWLAHNEIRSV 89
Query: 75 SGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTIT 134
+ +LA LS L +LDLSHN + + L +LQ L++D N+++ + D +
Sbjct: 90 AAGALASLSQLKSLDLSHNLISDFAWSDLHSLSALQLLKMDSNELTFIPRDAFRSLRALR 149
Query: 135 TLTLS 139
+L L+
Sbjct: 150 SLQLN 154
Score = 134 (52.2 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 35/107 (32%), Positives = 58/107 (54%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
+++ LS++ NQ S+ GA + +L SL HN+I + + +LS L LDL+HN
Sbjct: 50 ANVTTLSLSANQLPSLPGGAFREVPRLQSLWLAHNEIRSVAAGALASLSQLKSLDLSHNL 109
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
I + + L LS L L + N L + +D L++L+ L+L+ N
Sbjct: 110 ISDFAWSDLHSLSALQLLKMDSNELTFIPRDAFRSLRALRSLQLNHN 156
Score = 107 (42.7 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 22/66 (33%), Positives = 37/66 (56%)
Query: 4 WCTVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 63
W + LS+L++L + N+ + + R A L L SL +HN++ L + +F L+ LSH
Sbjct: 115 WSDLHSLSALQLLKMDSNELTFIPRDAFRSLRALRSLQLNHNRLHTLAEGTFAPLTALSH 174
Query: 64 LDLAHN 69
L + N
Sbjct: 175 LQINDN 180
>MGI|MGI:1349645 [details] [associations]
symbol:Islr "immunoglobulin superfamily containing
leucine-rich repeat" species:10090 "Mus musculus" [GO:0005576
"extracellular region" evidence=IEA] InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450 MGI:MGI:1349645
GO:GO:0005576 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 HSSP:P07359
eggNOG:NOG240332 OrthoDB:EOG4QC14W GeneTree:ENSGT00700000104028
CTD:3671 HOGENOM:HOG000113109 HOVERGEN:HBG100853 OMA:HGKAVEG
EMBL:AB024538 EMBL:AB024539 EMBL:BC006602 IPI:IPI00123635
RefSeq:NP_001182360.1 RefSeq:NP_036173.1 UniGene:Mm.367887
ProteinModelPortal:Q6GU68 SMR:Q6GU68 STRING:Q6GU68 PRIDE:Q6GU68
Ensembl:ENSMUST00000041477 Ensembl:ENSMUST00000168864 GeneID:26968
KEGG:mmu:26968 UCSC:uc009pwk.2 InParanoid:Q6GU68 NextBio:304907
Bgee:Q6GU68 Genevestigator:Q6GU68 Uniprot:Q6GU68
Length = 428
Score = 157 (60.3 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 39/110 (35%), Positives = 56/110 (50%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
R + L+ L +AHN+ SV GALA L L SL HN + LS L L +
Sbjct: 71 REVPLLQSLWLAHNEIRSVAIGALAPLSHLKSLDLSHNLLSEFAWSDLHNLSALQLLKMD 130
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
N + + + + LS L +L L+HN L AL + PL +L L+++DN
Sbjct: 131 SNELAFIPRDAFSSLSALRSLQLNHNRLHALAEGTFAPLTALSHLQINDN 180
Score = 151 (58.2 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 41/135 (30%), Positives = 67/135 (49%)
Query: 5 CTVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHL 64
C ++ A+ V G A + T+LS N++ L + +FR + L L
Sbjct: 23 CDCGEKYGFQIADCAYRDLEGVPPGFPANV---TTLSLSANRLPGLPEGAFREVPLLQSL 79
Query: 65 DLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTP 124
LAHN I +V+ +LA LS+L +LDLSHN L + L +LQ L++D N+++ +
Sbjct: 80 WLAHNEIRSVAIGALAPLSHLKSLDLSHNLLSEFAWSDLHNLSALQLLKMDSNELAFIPR 139
Query: 125 DVIGDNVTITTLTLS 139
D + +L L+
Sbjct: 140 DAFSSLSALRSLQLN 154
Score = 121 (47.7 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 32/107 (29%), Positives = 56/107 (52%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
+++ LS++ N+ + GA + L SL HN+I + + LS L LDL+HN
Sbjct: 50 ANVTTLSLSANRLPGLPEGAFREVPLLQSLWLAHNEIRSVAIGALAPLSHLKSLDLSHNL 109
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
+ + + L +LS L L + N L + +D + L +L+ L+L+ N
Sbjct: 110 LSEFAWSDLHNLSALQLLKMDSNELAFIPRDAFSSLSALRSLQLNHN 156
Score = 112 (44.5 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 22/66 (33%), Positives = 38/66 (57%)
Query: 4 WCTVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 63
W + LS+L++L + N+ + + R A + L L SL +HN++ L + +F L+ LSH
Sbjct: 115 WSDLHNLSALQLLKMDSNELAFIPRDAFSSLSALRSLQLNHNRLHALAEGTFAPLTALSH 174
Query: 64 LDLAHN 69
L + N
Sbjct: 175 LQINDN 180
>MGI|MGI:2444651 [details] [associations]
symbol:Lingo4 "leucine rich repeat and Ig domain containing
4" species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 MGI:MGI:2444651 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00690000101682 HOGENOM:HOG000246971
HOVERGEN:HBG057546 CTD:339398 eggNOG:NOG306417 OrthoDB:EOG49KFQ7
EMBL:BC117866 EMBL:BC117867 EMBL:AK042286 IPI:IPI00273210
RefSeq:NP_796224.1 UniGene:Mm.213001 ProteinModelPortal:Q149C3
SMR:Q149C3 PhosphoSite:Q149C3 PRIDE:Q149C3
Ensembl:ENSMUST00000050975 GeneID:320747 KEGG:mmu:320747
UCSC:uc008qgb.1 InParanoid:Q149C3 NextBio:397357 Bgee:Q149C3
CleanEx:MM_LINGO4 Genevestigator:Q149C3 Uniprot:Q149C3
Length = 593
Score = 159 (61.0 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 43/145 (29%), Positives = 72/145 (49%)
Query: 2 SIWCTVRRLSSL--------KVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDH 53
+++C RRL ++ ++L ++ N+ ++RG L+ L +L L +NQ+ LE
Sbjct: 43 AVFCAHRRLDTIPGGLPLDTELLDLSGNRLWGLQRGMLSRLGQLQELDLSYNQLSTLEPG 102
Query: 54 SFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELR 113
+F L +L L L NR+ V + L+ LT LDL N + + L SLQ+L
Sbjct: 103 AFHGLQSLLTLRLQGNRLRIVGPGIFSGLTALTLLDLRLNQIVLFLDGAFSELGSLQQLE 162
Query: 114 LDDNDISMVTPDVIGDNVTITTLTL 138
+ DN + V P ++T+TL
Sbjct: 163 VGDNHLVFVAPGAFAGLAKLSTITL 187
Score = 128 (50.1 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 38/107 (35%), Positives = 55/107 (51%)
Query: 9 RLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHH-NQIDVLEDHSFRALSTLSHLDLA 67
+L +L L + + GAL GL +L L HH ++ L+ S L+ LS L +
Sbjct: 202 QLPALVALRLRELDIERLPAGALRGLGQLKELEIHHWPSLEALDPGSLVGLN-LSSLAIT 260
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRL 114
+ +V +L HLS L LDLS N + A+ ++PL LQELRL
Sbjct: 261 RCNLSSVPFQALHHLSFLRILDLSQNPISAIPARRLSPLVRLQELRL 307
Score = 127 (49.8 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 33/114 (28%), Positives = 57/114 (50%)
Query: 9 RLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 68
RL L+ L +++NQ S++ GA GL L +L N++ ++ F L+ L+ LDL
Sbjct: 82 RLGQLQELDLSYNQLSTLEPGAFHGLQSLLTLRLQGNRLRIVGPGIFSGLTALTLLDLRL 141
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
N+IV + + L +L L++ N L + L L + L+ ++S V
Sbjct: 142 NQIVLFLDGAFSELGSLQQLEVGDNHLVFVAPGAFAGLAKLSTITLERCNLSTV 195
Score = 123 (48.4 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 36/110 (32%), Positives = 54/110 (49%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L SL L + N+ V G +GL LT L NQI + D +F L +L L++ N
Sbjct: 107 LQSLLTLRLQGNRLRIVGPGIFSGLTALTLLDLRLNQIVLFLDGAFSELGSLQQLEVGDN 166
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
+V V+ + A L+ L+T+ L L + + L +L LRL + DI
Sbjct: 167 HLVFVAPGAFAGLAKLSTITLERCNLSTVPGLALAQLPALVALRLRELDI 216
>MGI|MGI:107973 [details] [associations]
symbol:Igfals "insulin-like growth factor binding protein,
acid labile subunit" species:10090 "Mus musculus" [GO:0005515
"protein binding" evidence=IPI] [GO:0005520 "insulin-like growth
factor binding" evidence=ISO] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=ISO] [GO:0042567
"insulin-like growth factor ternary complex" evidence=ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 MGI:MGI:107973
GO:GO:0005634 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 CTD:3483
HOVERGEN:HBG000327 OrthoDB:EOG4FFD1R InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 EMBL:U66900 EMBL:AK004926
IPI:IPI00556721 PIR:JC6128 RefSeq:NP_032366.2 UniGene:Mm.3135
ProteinModelPortal:P70389 SMR:P70389 IntAct:P70389 MINT:MINT-217480
STRING:P70389 PaxDb:P70389 PRIDE:P70389 Ensembl:ENSMUST00000050714
GeneID:16005 KEGG:mmu:16005 GeneTree:ENSGT00690000101816
InParanoid:P70389 NextBio:288802 Bgee:P70389 Genevestigator:P70389
GermOnline:ENSMUSG00000046070 GO:GO:0042567 Uniprot:P70389
Length = 603
Score = 159 (61.0 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 43/117 (36%), Positives = 58/117 (49%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
R SL LS+ +N + G GL L L+ N + VL D F+ L L L LA
Sbjct: 143 RHTPSLASLSLGNNLLGRLEEGLFRGLSHLWDLNLGWNSLVVLPDTVFQGLGNLHELVLA 202
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTP 124
N++ + A L L L LDLS N LR++ ++ L LQ+L LD N I+ V P
Sbjct: 203 GNKLTYLQPALLCGLGELRELDLSRNALRSVKANVFIHLPRLQKLYLDRNLITAVAP 259
Score = 156 (60.0 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 41/119 (34%), Positives = 64/119 (53%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L ++ V++++ N S+ GL +L SL H+ + + H+F LS L L L N
Sbjct: 361 LFNVAVMNLSGNCLRSLPEHVFQGLGRLHSLHLEHSCLGRIRLHTFAGLSGLRRLFLRDN 420
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
I ++ SLA LS L LDL+ N L L + L L L+ L L +N ++M++ DV+G
Sbjct: 421 SISSIEEQSLAGLSELLELDLTANQLTHLPRQLFQGLGQLEYLLLSNNQLTMLSEDVLG 479
Score = 148 (57.2 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 40/119 (33%), Positives = 58/119 (48%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T LS L+ L + N SS+ +LAGL +L L NQ+ L F+ L L +L
Sbjct: 405 TFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTANQLTHLPRQLFQGLGQLEYLL 464
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTP 124
L++N++ +S L L LDLSHN L + L + L L+ L L +N + P
Sbjct: 465 LSNNQLTMLSEDVLGPLQRAFWLDLSHNRLETPAEGLFSSLGRLRYLNLRNNSLQTFVP 523
Score = 131 (51.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 40/131 (30%), Positives = 58/131 (44%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L+ L + N ++V A G+ L L HN++ L + +F L L L LAHN
Sbjct: 241 LPRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVAGLLEDTFPGLLGLHVLRLAHN 300
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
I ++ + L L L L HN +R L + L L+ L L+DN I V
Sbjct: 301 AITSLRPRTFKDLHFLEELQLGHNRIRQLGEKTFEGLGQLEVLTLNDNQIHEVKVGAFFG 360
Query: 130 NVTITTLTLSG 140
+ + LSG
Sbjct: 361 LFNVAVMNLSG 371
Score = 128 (50.1 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 36/113 (31%), Positives = 54/113 (47%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L VL +AHN +S+R L L L HN+I L + +F L L L L N
Sbjct: 289 LLGLHVLRLAHNAITSLRPRTFKDLHFLEELQLGHNRIRQLGEKTFEGLGQLEVLTLNDN 348
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
+I V + L N+ ++LS N LR+L + + L L L L+ + + +
Sbjct: 349 QIHEVKVGAFFGLFNVAVMNLSGNCLRSLPEHVFQGLGRLHSLHLEHSCLGRI 401
Score = 127 (49.8 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 38/120 (31%), Positives = 56/120 (46%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L +L L +A N+ + ++ L GL +L L N + ++ + F L L L L N
Sbjct: 193 LGNLHELVLAGNKLTYLQPALLCGLGELRELDLSRNALRSVKANVFIHLPRLQKLYLDRN 252
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
I AV+ + + L LDLSHN + L +D L L LRL N I+ + P D
Sbjct: 253 LITAVAPRAFLGMKALRWLDLSHNRVAGLLEDTFPGLLGLHVLRLAHNAITSLRPRTFKD 312
Score = 127 (49.8 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 36/130 (27%), Positives = 56/130 (43%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L+ L ++ N SV+ L +L L N I + +F + L LDL+HN
Sbjct: 217 LGELRELDLSRNALRSVKANVFIHLPRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHN 276
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
R+ + + L L L L+HN + +L L L+EL+L N I +
Sbjct: 277 RVAGLLEDTFPGLLGLHVLRLAHNAITSLRPRTFKDLHFLEELQLGHNRIRQLGEKTFEG 336
Query: 130 NVTITTLTLS 139
+ LTL+
Sbjct: 337 LGQLEVLTLN 346
Score = 126 (49.4 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 40/149 (26%), Positives = 67/149 (44%)
Query: 1 MSIWCTVRRLSSL--------KVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLED 52
+S++C+ R L+ L + L + N SS+ A L L L+ + + LE
Sbjct: 56 LSVFCSSRNLTQLPDGIPVSTRALWLDGNNLSSIPSAAFQNLSSLDFLNLQGSWLRSLEP 115
Query: 53 HSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQEL 112
+ L L HL L N + +++ H +L +L L +N L L + L L L +L
Sbjct: 116 QALLGLQNLYHLHLERNLLRSLAAGLFRHTPSLASLSLGNNLLGRLEEGLFRGLSHLWDL 175
Query: 113 RLDDNDISMVTPDVIGDNV-TITTLTLSG 140
L N + +V PD + + + L L+G
Sbjct: 176 NLGWNSL-VVLPDTVFQGLGNLHELVLAG 203
Score = 121 (47.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 34/115 (29%), Positives = 55/115 (47%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T L L+VL++ NQ V+ GA GL + ++ N + L +H F+ L L L
Sbjct: 333 TFEGLGQLEVLTLNDNQIHEVKVGAFFGLFNVAVMNLSGNCLRSLPEHVFQGLGRLHSLH 392
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
L H+ + + + A LS L L L N + ++ + + L L EL L N ++
Sbjct: 393 LEHSCLGRIRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTANQLT 447
Score = 120 (47.3 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 37/115 (32%), Positives = 52/115 (45%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L L + H+ +R AGL L L N I +E+ S LS L LDL N
Sbjct: 385 LGRLHSLHLEHSCLGRIRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTAN 444
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTP 124
++ + L L L LS+N L L++D++ PL+ L L N + TP
Sbjct: 445 QLTHLPRQLFQGLGQLEYLLLSNNQLTMLSEDVLGPLQRAFWLDLSHNRLE--TP 497
Score = 115 (45.5 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 39/117 (33%), Positives = 53/117 (45%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L +L L + N S+ G L SLS +N + LE+ FR LS L L+L N
Sbjct: 121 LQNLYHLHLERNLLRSLAAGLFRHTPSLASLSLGNNLLGRLEEGLFRGLSHLWDLNLGWN 180
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDV 126
+V + L NL L L+ N L L L+ L L+EL L N + V +V
Sbjct: 181 SLVVLPDTVFQGLGNLHELVLAGNKLTYLQPALLCGLGELRELDLSRNALRSVKANV 237
Score = 105 (42.0 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 35/120 (29%), Positives = 55/120 (45%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
+ LSSL L++ + S+ AL GL L L N + L FR +L+ L L
Sbjct: 95 QNLSSLDFLNLQGSWLRSLEPQALLGLQNLYHLHLERNLLRSLAAGLFRHTPSLASLSLG 154
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI 127
+N + + LS+L L+L N L L + L +L EL L N ++ + P ++
Sbjct: 155 NNLLGRLEEGLFRGLSHLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGNKLTYLQPALL 214
Score = 104 (41.7 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 31/117 (26%), Positives = 55/117 (47%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T + L L+ L + HN+ + GL +L L+ + NQI ++ +F L ++ ++
Sbjct: 309 TFKDLHFLEELQLGHNRIRQLGEKTFEGLGQLEVLTLNDNQIHEVKVGAFFGLFNVAVMN 368
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
L+ N + ++ L L +L L H+ L + L L+ L L DN IS +
Sbjct: 369 LSGNCLRSLPEHVFQGLGRLHSLHLEHSCLGRIRLHTFAGLSGLRRLFLRDNSISSI 425
Score = 102 (41.0 bits), Expect = 0.00032, P = 0.00032
Identities = 29/108 (26%), Positives = 47/108 (43%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
+ +L+ L ++HN+ + + GL L L HN I L +F+ L L L L HN
Sbjct: 265 MKALRWLDLSHNRVAGLLEDTFPGLLGLHVLRLAHNAITSLRPRTFKDLHFLEELQLGHN 324
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
RI + + L L L L+ N + + L ++ + L N
Sbjct: 325 RIRQLGEKTFEGLGQLEVLTLNDNQIHEVKVGAFFGLFNVAVMNLSGN 372
>FB|FBgn0005775 [details] [associations]
symbol:Con "Connectin" species:7227 "Drosophila melanogaster"
[GO:0044295 "axonal growth cone" evidence=IDA] [GO:0007156
"homophilic cell adhesion" evidence=NAS;IDA;TAS] [GO:0009986 "cell
surface" evidence=IDA] [GO:0031594 "neuromuscular junction"
evidence=IDA] [GO:0007155 "cell adhesion" evidence=NAS] [GO:0016200
"synaptic target attraction" evidence=TAS] [GO:0007413 "axonal
fasciculation" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005886
GO:GO:0009986 EMBL:AE014296 GO:GO:0031225 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0031594 GO:GO:0007413 GO:GO:0007156 GO:GO:0044295 EMBL:M96647
EMBL:X68701 EMBL:AY119518 PIR:A43318 PIR:A49121
RefSeq:NP_001246635.1 RefSeq:NP_523930.3 UniGene:Dm.2557
ProteinModelPortal:Q01819 SMR:Q01819 STRING:Q01819 PaxDb:Q01819
GeneID:38590 KEGG:dme:Dmel_CG7503 UCSC:CG7503-RA CTD:38590
FlyBase:FBgn0005775 InParanoid:Q01819 OrthoDB:EOG49KD5V
GenomeRNAi:38590 NextBio:809410 Bgee:Q01819 GermOnline:CG7503
GO:GO:0016200 Uniprot:Q01819
Length = 682
Score = 159 (61.0 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 41/126 (32%), Positives = 62/126 (49%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
L+ L++ HNQ + R A L L ++N I L + F ++ L+ L+LAHN+I
Sbjct: 224 LRELNLEHNQIFEMDRYAFRNLPLCERLFLNNNNISTLHEGLFADMARLTFLNLAHNQIN 283
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVT 132
++ L NL L L+ N L + + L SL EL LDDN I ++ + T
Sbjct: 284 VLTSEIFRGLGNLNVLKLTRNNLNFIGDTVFAELWSLSELELDDNRIERISERALDGLNT 343
Query: 133 ITTLTL 138
+ TL L
Sbjct: 344 LKTLNL 349
Score = 140 (54.3 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 41/140 (29%), Positives = 69/140 (49%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
R L + L + +N S++ G A + +LT L+ HNQI+VL FR L L+ L L
Sbjct: 243 RNLPLCERLFLNNNNISTLHEGLFADMARLTFLNLAHNQINVLTSEIFRGLGNLNVLKLT 302
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV----- 122
N + + A L +L+ L+L N + +++ + L +L+ L L +N + +
Sbjct: 303 RNNLNFIGDTVFAELWSLSELELDDNRIERISERALDGLNTLKTLNLRNNLLKKIDNGLL 362
Query: 123 --TPDVIGDNVTITTL-TLS 139
TP ++ NV L TL+
Sbjct: 363 RGTPALLSINVQANKLETLT 382
Score = 138 (53.6 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 35/129 (27%), Positives = 67/129 (51%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L+ + + +N ++ + A A +L L+ HNQI ++ ++FR L L L +N
Sbjct: 197 LPFLERIILNNNHIMALDQDAFANHIRLRELNLEHNQIFEMDRYAFRNLPLCERLFLNNN 256
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
I + A ++ LT L+L+HN + LT ++ L +L L+L N+++ + V +
Sbjct: 257 NISTLHEGLFADMARLTFLNLAHNQINVLTSEIFRGLGNLNVLKLTRNNLNFIGDTVFAE 316
Query: 130 NVTITTLTL 138
+++ L L
Sbjct: 317 LWSLSELEL 325
Score = 113 (44.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 31/132 (23%), Positives = 66/132 (50%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
+RL LK + + + + + L L+S+ ++Q+++++ ++F L L + L
Sbjct: 147 KRLRELKFVIQNNARLDYIPTMIIEPLKNLSSIVIEYSQVEIVKSYAFANLPFLERIILN 206
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI 127
+N I+A+ + A+ L L+L HN + + + L + L L++N+IS + +
Sbjct: 207 NNHIMALDQDAFANHIRLRELNLEHNQIFEMDRYAFRNLPLCERLFLNNNNISTLHEGLF 266
Query: 128 GDNVTITTLTLS 139
D +T L L+
Sbjct: 267 ADMARLTFLNLA 278
Score = 110 (43.8 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 35/133 (26%), Positives = 63/133 (47%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
+ L +L + I ++Q V+ A A L L + ++N I L+ +F L L+L
Sbjct: 170 IEPLKNLSSIVIEYSQVEIVKSYAFANLPFLERIILNNNHIMALDQDAFANHIRLRELNL 229
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDV 126
HN+I + + +L L L++N + L + L + L L L N I+++T ++
Sbjct: 230 EHNQIFEMDRYAFRNLPLCERLFLNNNNISTLHEGLFADMARLTFLNLAHNQINVLTSEI 289
Query: 127 I-G-DNVTITTLT 137
G N+ + LT
Sbjct: 290 FRGLGNLNVLKLT 302
>ZFIN|ZDB-GENE-080327-14 [details] [associations]
symbol:lrrtm4l2 "leucine rich repeat transmembrane
neuronal 4 like 2" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IDA] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-080327-14 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0042802
InterPro:IPR000372 SMART:SM00013 HOVERGEN:HBG052362 EMBL:CU468765
IPI:IPI00876678 UniGene:Dr.110767 IntAct:A8BB35 STRING:A8BB35
Uniprot:A8BB35
Length = 445
Score = 156 (60.0 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 44/135 (32%), Positives = 65/135 (48%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T SL+ L + +N+ ++ R GL +LT L HNQ + F L L L
Sbjct: 172 TFMECRSLEFLDLGYNRLRTITRTTFLGLLRLTELHLEHNQFSRINFFLFPRLLNLQALY 231
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
L NRI V S L LDLS N ++ L + L +L L L+ N IS V+ +
Sbjct: 232 LQWNRIRTVVQGSPWTWHTLQKLDLSGNEIQILDPAIFRCLPNLHTLNLESNKISNVSLE 291
Query: 126 VIGDNVTITTLTLSG 140
V+ ++I+T+ L+G
Sbjct: 292 VVSSWISISTINLAG 306
Score = 131 (51.2 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 41/135 (30%), Positives = 60/135 (44%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T + +L+ L +++NQ + G GL KL +L N I + +F +L LD
Sbjct: 124 TFETVPNLRNLDLSYNQMQDLVPGHFHGLRKLQNLHLRSNNIRSIPVRTFMECRSLEFLD 183
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
L +NR+ ++ + L LT L L HN + L L +LQ L L N I V
Sbjct: 184 LGYNRLRTITRTTFLGLLRLTELHLEHNQFSRINFFLFPRLLNLQALYLQWNRIRTVVQG 243
Query: 126 VIGDNVTITTLTLSG 140
T+ L LSG
Sbjct: 244 SPWTWHTLQKLDLSG 258
Score = 127 (49.8 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 34/114 (29%), Positives = 56/114 (49%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI-DVLEDHSFRALSTLSHLDLAH 68
L LK L ++ N+ + ++ G + L +L +NQ+ D++ H F L L +L L
Sbjct: 104 LRRLKELILSSNKIAQLQNGTFETVPNLRNLDLSYNQMQDLVPGH-FHGLRKLQNLHLRS 162
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
N I ++ + +L LDL +N LR +T+ L L EL L+ N S +
Sbjct: 163 NNIRSIPVRTFMECRSLEFLDLGYNRLRTITRTTFLGLLRLTELHLEHNQFSRI 216
Score = 121 (47.7 bits), Expect = 9.3e-07, P = 9.3e-07
Identities = 32/107 (29%), Positives = 52/107 (48%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
LS+ +N + A L++L L HN I ++ +F+ L L L L+ N+I +
Sbjct: 62 LSLRYNSLLLLLPYQFAHLNQLVWLYLDHNSISTVDRLAFQGLRRLKELILSSNKIAQLQ 121
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
+ + NL LDLS+N ++ L L+ LQ L L N+I +
Sbjct: 122 NGTFETVPNLRNLDLSYNQMQDLVPGHFHGLRKLQNLHLRSNNIRSI 168
Score = 118 (46.6 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 37/129 (28%), Positives = 61/129 (47%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L+ L L + HN S+V R A GL +L L N+I L++ +F + L +LDL++N
Sbjct: 80 LNQLVWLYLDHNSISTVDRLAFQGLRRLKELILSSNKIAQLQNGTFETVPNLRNLDLSYN 139
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
++ + L L L L N +R++ +SL+ L L N + +T
Sbjct: 140 QMQDLVPGHFHGLRKLQNLHLRSNNIRSIPVRTFMECRSLEFLDLGYNRLRTITRTTFLG 199
Query: 130 NVTITTLTL 138
+ +T L L
Sbjct: 200 LLRLTELHL 208
>UNIPROTKB|Q50LG9 [details] [associations]
symbol:LRRC24 "Leucine-rich repeat-containing protein 24"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 eggNOG:NOG255871
EMBL:AB178281 EMBL:AC084125 EMBL:BC111067 IPI:IPI00455850
RefSeq:NP_001019849.2 UniGene:Hs.459391 UniGene:Hs.740859
ProteinModelPortal:Q50LG9 SMR:Q50LG9 DMDM:296434571 PaxDb:Q50LG9
PRIDE:Q50LG9 Ensembl:ENST00000529415 GeneID:441381 KEGG:hsa:441381
UCSC:uc003zdm.3 CTD:441381 GeneCards:GC08M145747 HGNC:HGNC:28947
HPA:HPA037689 neXtProt:NX_Q50LG9 PharmGKB:PA142671520
HOGENOM:HOG000234857 HOVERGEN:HBG079563 InParanoid:Q50LG9
OMA:NITLAHA OrthoDB:EOG4DR9CG GenomeRNAi:441381 NextBio:110128
ArrayExpress:Q50LG9 Bgee:Q50LG9 CleanEx:HS_LRRC24
Genevestigator:Q50LG9 GermOnline:ENSG00000177021 Uniprot:Q50LG9
Length = 513
Score = 157 (60.3 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 40/102 (39%), Positives = 56/102 (54%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
L++ N+ +R GA GL +L L NQ+ L D +F L L L L N I +
Sbjct: 103 LALTSNRLRGLRSGAFVGLAQLRVLYLAGNQLARLLDFTFLHLPRLQELHLQENSIELLE 162
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
+LA LS+L LDLS N L ++++ + PL SLQ LRL +N
Sbjct: 163 DQALAGLSSLALLDLSRNQLGTISREALQPLASLQVLRLTEN 204
Score = 135 (52.6 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 39/126 (30%), Positives = 57/126 (45%)
Query: 14 KVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVA 73
+ L + N + + GALA L L L H+N + LE +FRA L L L NR+
Sbjct: 53 QTLFLQDNNIARLEPGALAPLAALRRLYLHNNSLRALEAGAFRAQPRLLELALTSNRLRG 112
Query: 74 VSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTI 133
+ + L+ L L L+ N L L L LQEL L +N I ++ + ++
Sbjct: 113 LRSGAFVGLAQLRVLYLAGNQLARLLDFTFLHLPRLQELHLQENSIELLEDQALAGLSSL 172
Query: 134 TTLTLS 139
L LS
Sbjct: 173 ALLDLS 178
Score = 121 (47.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 29/84 (34%), Positives = 48/84 (57%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L+ L+VL +A NQ + + L +L L N I++LED + LS+L+ LDL+ N
Sbjct: 121 LAQLRVLYLAGNQLARLLDFTFLHLPRLQELHLQENSIELLEDQALAGLSSLALLDLSRN 180
Query: 70 RIVAVSGASLAHLSNLTTLDLSHN 93
++ +S +L L++L L L+ N
Sbjct: 181 QLGTISREALQPLASLQVLRLTEN 204
Score = 111 (44.1 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 32/130 (24%), Positives = 59/130 (45%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L++L+ L + +N ++ GA +L L+ N++ L +F L+ L L LA N
Sbjct: 73 LAALRRLYLHNNSLRALEAGAFRAQPRLLELALTSNRLRGLRSGAFVGLAQLRVLYLAGN 132
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
++ + + HL L L L N + L + L SL L L N + ++ + +
Sbjct: 133 QLARLLDFTFLHLPRLQELHLQENSIELLEDQALAGLSSLALLDLSRNQLGTISREALQP 192
Query: 130 NVTITTLTLS 139
++ L L+
Sbjct: 193 LASLQVLRLT 202
>FB|FBgn0243486 [details] [associations]
symbol:rdo "reduced ocelli" species:7227 "Drosophila
melanogaster" [GO:0008056 "ocellus development" evidence=IMP]
InterPro:IPR001611 PROSITE:PS51450 EMBL:AE014134 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GeneTree:ENSGT00700000104286
GO:GO:0008056 EMBL:BT004502 RefSeq:NP_609861.1 UniGene:Dm.21796
SMR:Q9VJA9 MINT:MINT-990018 STRING:Q9VJA9
EnsemblMetazoa:FBtr0081029 GeneID:35077 KEGG:dme:Dmel_CG15151
UCSC:CG15151-RA CTD:35077 FlyBase:FBgn0243486 InParanoid:Q9VJA9
OMA:FRGQDNL OrthoDB:EOG4CZ8WX GenomeRNAi:35077 NextBio:791738
Uniprot:Q9VJA9
Length = 741
Score = 159 (61.0 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 38/108 (35%), Positives = 56/108 (51%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L L + N+F + + + +LT + NQ+ V+ D FR +L+HLDL++N
Sbjct: 225 LPLLSELDLGRNEFKFLDKDEFRDVKRLTKVLLDGNQLSVVVDQLFRMQKSLNHLDLSYN 284
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
R+ V S L+NLT LDLS+N L L I L +L L + N
Sbjct: 285 RLAKVPNDSFLQLTNLTFLDLSYNKLVRLEPQSIRSLSNLLTLNISGN 332
Score = 140 (54.3 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 35/129 (27%), Positives = 65/129 (50%)
Query: 1 MSIWCTVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALST 60
++I +R+ L++L I + ++ + GL L L N I + +++FR
Sbjct: 72 ITIGPALRQFMKLEILRITDSNLPAIGAESFWGLKYLRILDLSKNNITNITENNFRGQDN 131
Query: 61 LSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
L LDL+ N+++ ++ ++ HL++L L+L+ N + L Q L L+ L L N +
Sbjct: 132 LLELDLSKNKVLRMASSTFRHLTDLRRLNLADNSIVELVQRNFFMLSRLKYLDLSGNPLQ 191
Query: 121 MVTPDVIGD 129
+ PDV D
Sbjct: 192 DLQPDVFRD 200
Score = 128 (50.1 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 33/117 (28%), Positives = 57/117 (48%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L++L ++ N +++ G D L L N++ + +FR L+ L L+LA N
Sbjct: 105 LKYLRILDLSKNNITNITENNFRGQDNLLELDLSKNKVLRMASSTFRHLTDLRRLNLADN 164
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDV 126
IV + + LS L LDLS N L+ L D+ + L+ L+ + + + P +
Sbjct: 165 SIVELVQRNFFMLSRLKYLDLSGNPLQDLQPDVFRDVPELKVLKCRNCQLKKINPQM 221
Score = 112 (44.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 35/130 (26%), Positives = 52/130 (40%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
LS LK L ++ N ++ + +L L C + Q+ + + L LS LDL N
Sbjct: 177 LSRLKYLDLSGNPLQDLQPDVFRDVPELKVLKCRNCQLKKINPQMYNLLPLLSELDLGRN 236
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+ + LT + L N L + L KSL L L N ++ V D
Sbjct: 237 EFKFLDKDEFRDVKRLTKVLLDGNQLSVVVDQLFRMQKSLNHLDLSYNRLAKVPNDSFLQ 296
Query: 130 NVTITTLTLS 139
+T L LS
Sbjct: 297 LTNLTFLDLS 306
Score = 111 (44.1 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 33/94 (35%), Positives = 52/94 (55%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
V+RL+ KVL + NQ S V L L +N++ + + SF L+ L+ LDL
Sbjct: 249 VKRLT--KVL-LDGNQLSVVVDQLFRMQKSLNHLDLSYNRLAKVPNDSFLQLTNLTFLDL 305
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQ 100
++N++V + S+ LSNL TL++S N L L +
Sbjct: 306 SYNKLVRLEPQSIRSLSNLLTLNISGNVLMDLRE 339
Score = 104 (41.7 bits), Expect = 0.00013, P = 0.00013
Identities = 36/133 (27%), Positives = 55/133 (41%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
R + LKVL + Q + L L+ L N+ L+ FR + L+ + L
Sbjct: 199 RDVPELKVLKCRNCQLKKINPQMYNLLPLLSELDLGRNEFKFLDKDEFRDVKRLTKVLLD 258
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI 127
N++ V +L LDLS+N L + D L +L L L N + + P I
Sbjct: 259 GNQLSVVVDQLFRMQKSLNHLDLSYNRLAKVPNDSFLQLTNLTFLDLSYNKLVRLEPQSI 318
Query: 128 GDNVTITTLTLSG 140
+ TL +SG
Sbjct: 319 RSLSNLLTLNISG 331
>FB|FBgn0033250 [details] [associations]
symbol:CG14762 species:7227 "Drosophila melanogaster"
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
InterPro:IPR001611 PROSITE:PS51450 EMBL:AE013599 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GeneTree:ENSGT00700000104056
EMBL:AY060601 RefSeq:NP_610346.1 UniGene:Dm.3950 SMR:Q7K2X5
EnsemblMetazoa:FBtr0088867 GeneID:35768 KEGG:dme:Dmel_CG14762
UCSC:CG14762-RA FlyBase:FBgn0033250 InParanoid:Q7K2X5
OrthoDB:EOG4N8PM4 GenomeRNAi:35768 NextBio:795128 Uniprot:Q7K2X5
Length = 470
Score = 156 (60.0 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 45/132 (34%), Positives = 67/132 (50%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALS-TLSHLDLAH 68
L SL L +AHN ++V + L L SL N+I V++ +F+ L L +L L
Sbjct: 249 LQSLDSLILAHNMITTVPANVFSHLTLLNSLELEGNKISVIDKDAFKGLEENLQYLRLGD 308
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPL-KSLQELRLDDNDISMVTPDVI 127
N+I + +L L L LDL +N + L +D T SL L L NDI V P ++
Sbjct: 309 NQIHTIPSEALRPLHRLRHLDLRNNNINVLAEDAFTGFGDSLTFLNLQKNDIK-VLPSLL 367
Query: 128 GDNV-TITTLTL 138
+N+ ++ TL L
Sbjct: 368 FENLNSLETLNL 379
Score = 148 (57.2 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 36/116 (31%), Positives = 60/116 (51%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
+K L++ N +++ + AL+ L L L N+I + + F L +L L LAHN I
Sbjct: 204 IKRLNLGGNDLTNIPQKALSILSTLKKLEIQENKIRTISEGDFEGLQSLDSLILAHNMIT 263
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLK-SLQELRLDDNDISMVTPDVI 127
V +HL+ L +L+L N + + +D L+ +LQ LRL DN I + + +
Sbjct: 264 TVPANVFSHLTLLNSLELEGNKISVIDKDAFKGLEENLQYLRLGDNQIHTIPSEAL 319
Score = 148 (57.2 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 37/135 (27%), Positives = 69/135 (51%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALST-LSHLD 65
++ L L +L++ HN+ + + A GL+ L L+ + N+I ++ +FR L + L+
Sbjct: 149 LQHLFHLLILNLNHNKITVIHNNAFEGLETLEILTLYENKITQIDPEAFRGLEDHIKRLN 208
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
L N + + +L+ LS L L++ N +R +++ L+SL L L N I+ V +
Sbjct: 209 LGGNDLTNIPQKALSILSTLKKLEIQENKIRTISEGDFEGLQSLDSLILAHNMITTVPAN 268
Query: 126 VIGDNVTITTLTLSG 140
V + +L L G
Sbjct: 269 VFSHLTLLNSLELEG 283
Score = 134 (52.2 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 32/117 (27%), Positives = 60/117 (51%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGL-DKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 68
L +L++L++ N+ + + A GL D + L+ N + + + LSTL L++
Sbjct: 176 LETLEILTLYENKITQIDPEAFRGLEDHIKRLNLGGNDLTNIPQKALSILSTLKKLEIQE 235
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
N+I +S L +L +L L+HN + + ++ + L L L L+ N IS++ D
Sbjct: 236 NKIRTISEGDFEGLQSLDSLILAHNMITTVPANVFSHLTLLNSLELEGNKISVIDKD 292
Score = 133 (51.9 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 34/127 (26%), Positives = 66/127 (51%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALST-LSHLDLAHNRIVAV 74
L + HN ++ LD + L+ H++ + +E+++ +L L+ LD++ N++ V
Sbjct: 86 LKLRHNNLPKLQGFVFLALD-IRHLTIHNSSLAAIEENALSSLGAGLTQLDVSLNQMKTV 144
Query: 75 SGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI-GDNVTI 133
+L HL +L L+L+HN + + + L++L+ L L +N I+ + P+ G I
Sbjct: 145 PSQALQHLFHLLILNLNHNKITVIHNNAFEGLETLEILTLYENKITQIDPEAFRGLEDHI 204
Query: 134 TTLTLSG 140
L L G
Sbjct: 205 KRLNLGG 211
Score = 127 (49.8 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 32/111 (28%), Positives = 62/111 (55%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALS-TLSHLDLAHNR 70
+L+ L + NQ ++ AL L +L L +N I+VL + +F +L+ L+L N
Sbjct: 300 NLQYLRLGDNQIHTIPSEALRPLHRLRHLDLRNNNINVLAEDAFTGFGDSLTFLNLQKND 359
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITP-LKSLQELRLDDNDIS 120
I + +L++L TL+L +N L+ + QD++ P + +L+ + + DN ++
Sbjct: 360 IKVLPSLLFENLNSLETLNLQNNKLQRIPQDIMEPVIDTLRIIDITDNPLN 410
Score = 127 (49.8 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 33/114 (28%), Positives = 60/114 (52%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
+ L L ++ NQ +V AL L L L+ +HN+I V+ +++F L TL L L N+
Sbjct: 129 AGLTQLDVSLNQMKTVPSQALQHLFHLLILNLNHNKITVIHNNAFEGLETLEILTLYENK 188
Query: 71 IVAVSGASLAHLSN-LTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVT 123
I + + L + + L+L N L + Q ++ L +L++L + +N I ++
Sbjct: 189 ITQIDPEAFRGLEDHIKRLNLGGNDLTNIPQKALSILSTLKKLEIQENKIRTIS 242
>UNIPROTKB|P22792 [details] [associations]
symbol:CPN2 "Carboxypeptidase N subunit 2" species:9606
"Homo sapiens" [GO:0050821 "protein stabilization" evidence=NAS]
[GO:0005576 "extracellular region" evidence=NAS] [GO:0030234
"enzyme regulator activity" evidence=NAS] [GO:0050790 "regulation
of catalytic activity" evidence=NAS] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0030234 GO:GO:0005576
GO:GO:0050821 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 CTD:1370 InterPro:IPR000372
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 EMBL:AC125362
EMBL:J05158 EMBL:AC174158 EMBL:BC031569 EMBL:BC042334 EMBL:BC137398
EMBL:BC137403 IPI:IPI00479116 PIR:A34901 RefSeq:NP_001073982.2
UniGene:Hs.528368 ProteinModelPortal:P22792 SMR:P22792
STRING:P22792 DMDM:52788240 PaxDb:P22792 PRIDE:P22792
Ensembl:ENST00000323830 Ensembl:ENST00000429275 GeneID:1370
KEGG:hsa:1370 UCSC:uc003fts.3 GeneCards:GC03M194060
H-InvDB:HIX0030813 HGNC:HGNC:2313 HPA:HPA004732 MIM:603104
neXtProt:NX_P22792 PharmGKB:PA26830 HOGENOM:HOG000294123
HOVERGEN:HBG050814 InParanoid:P22792 KO:K13023 OMA:WQCDCHL
OrthoDB:EOG4WM4TF BindingDB:P22792 ChEMBL:CHEMBL3685
GenomeRNAi:1370 NextBio:5553 Bgee:P22792 CleanEx:HS_CPN2
Genevestigator:P22792 GermOnline:ENSG00000178772 Uniprot:P22792
Length = 545
Score = 157 (60.3 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 48/130 (36%), Positives = 66/130 (50%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L+SL L++ N ++ G L L SL NQ+ L F+ L+ L L+LA N
Sbjct: 120 LTSLGKLTLNFNMLEALPEGLFQHLAALESLHLQGNQLQALPRRLFQPLTHLKTLNLAQN 179
Query: 70 RIVAVSGASLAH-LSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
++A L H L++L TL LS+N L L Q + L SLQEL LD N+IS + P V
Sbjct: 180 -LLAQLPEELFHPLTSLQTLKLSNNALSGLPQGVFGKLGSLQELFLDSNNISELPPQVFS 238
Query: 129 DNVTITTLTL 138
+ L L
Sbjct: 239 QLFCLERLWL 248
Score = 143 (55.4 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 36/119 (30%), Positives = 62/119 (52%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L+ L + + F ++ + L L L+ + N ++ L + F+ L+ L L L N
Sbjct: 96 LPRLEDLEVTGSSFLNLSTNIFSNLTSLGKLTLNFNMLEALPEGLFQHLAALESLHLQGN 155
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
++ A+ L++L TL+L+ N L L ++L PL SLQ L+L +N +S + V G
Sbjct: 156 QLQALPRRLFQPLTHLKTLNLAQNLLAQLPEELFHPLTSLQTLKLSNNALSGLPQGVFG 214
Score = 138 (53.6 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 40/131 (30%), Positives = 64/131 (48%)
Query: 9 RLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 68
+L L+ L + N + + A L LT LS N + VL F L L L H
Sbjct: 239 QLFCLERLWLQRNAITHLPLSIFASLGNLTFLSLQWNMLRVLPAGLFAHTPCLVGLSLTH 298
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
N++ V+ + AHLSNL +L LS+N + L + L+ L +L L N+++ + P +
Sbjct: 299 NQLETVAEGTFAHLSNLRSLMLSYNAITHLPAGIFRDLEELVKLYLGSNNLTALHPALFQ 358
Query: 129 DNVTITTLTLS 139
+ + L+LS
Sbjct: 359 NLSKLELLSLS 369
Score = 133 (51.9 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 39/131 (29%), Positives = 56/131 (42%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L +L LS+ N + G A L LS HNQ++ + + +F LS L L L++N
Sbjct: 264 LGNLTFLSLQWNMLRVLPAGLFAHTPCLVGLSLTHNQLETVAEGTFAHLSNLRSLMLSYN 323
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
I + L L L L N L AL L L L+ L L N ++ + +
Sbjct: 324 AITHLPAGIFRDLEELVKLYLGSNNLTALHPALFQNLSKLELLSLSKNQLTTLPEGIFDT 383
Query: 130 NVTITTLTLSG 140
N + L L G
Sbjct: 384 NYNLFNLALHG 394
Score = 125 (49.1 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 37/102 (36%), Positives = 46/102 (45%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
LS+ HNQ +V G A L L SL +N I L FR L L L L N + A+
Sbjct: 294 LSLTHNQLETVAEGTFAHLSNLRSLMLSYNAITHLPAGIFRDLEELVKLYLGSNNLTALH 353
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
A +LS L L LS N L L + + +L L L N
Sbjct: 354 PALFQNLSKLELLSLSKNQLTTLPEGIFDTNYNLFNLALHGN 395
Score = 124 (48.7 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 40/130 (30%), Positives = 52/130 (40%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L+SL+ L +++N S + +G L L L N I L F L L L L N
Sbjct: 192 LTSLQTLKLSNNALSGLPQGVFGKLGSLQELFLDSNNISELPPQVFSQLFCLERLWLQRN 251
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
I + + A L NLT L L N LR L L L L L N + V
Sbjct: 252 AITHLPLSIFASLGNLTFLSLQWNMLRVLPAGLFAHTPCLVGLSLTHNQLETVAEGTFAH 311
Query: 130 NVTITTLTLS 139
+ +L LS
Sbjct: 312 LSNLRSLMLS 321
Score = 115 (45.5 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 37/126 (29%), Positives = 59/126 (46%)
Query: 14 KVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVA 73
KV+ + + Q R A GL +L L + L + F L++L L L N + A
Sbjct: 77 KVVFL-NTQLCQFRPDAFGGLPRLEDLEVTGSSFLNLSTNIFSNLTSLGKLTLNFNMLEA 135
Query: 74 VSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTI 133
+ HL+ L +L L N L+AL + L PL L+ L L N ++ + ++ ++
Sbjct: 136 LPEGLFQHLAALESLHLQGNQLQALPRRLFQPLTHLKTLNLAQNLLAQLPEELFHPLTSL 195
Query: 134 TTLTLS 139
TL LS
Sbjct: 196 QTLKLS 201
>RGD|620810 [details] [associations]
symbol:Rtn4r "reticulon 4 receptor" species:10116 "Rattus
norvegicus" [GO:0004872 "receptor activity" evidence=TAS]
[GO:0005783 "endoplasmic reticulum" evidence=IEA;ISO] [GO:0005886
"plasma membrane" evidence=IEA;ISO] [GO:0007409 "axonogenesis"
evidence=IEA;ISO] [GO:0009986 "cell surface" evidence=IEA;ISO]
[GO:0031225 "anchored to membrane" evidence=IEA] [GO:0050771
"negative regulation of axonogenesis" evidence=TAS]
InterPro:IPR001611 PROSITE:PS51450 RGD:620810 GO:GO:0005783
GO:GO:0005886 GO:GO:0009986 GO:GO:0031225 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0004872 GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GO:GO:0050771 GeneTree:ENSGT00690000101803 HOGENOM:HOG000116109
HOVERGEN:HBG063707 CTD:65078 KO:K16659 OrthoDB:EOG4MGS7M
EMBL:AY028438 EMBL:AF462390 IPI:IPI00197503 RefSeq:NP_446065.1
UniGene:Rn.229952 PDB:3KJ4 PDBsum:3KJ4 ProteinModelPortal:Q99M75
SMR:Q99M75 MINT:MINT-243866 STRING:Q99M75
Ensembl:ENSRNOT00000051037 GeneID:113912 KEGG:rno:113912
InParanoid:Q99M75 EvolutionaryTrace:Q99M75 NextBio:618010
Genevestigator:Q99M75 GermOnline:ENSRNOG00000030920 Uniprot:Q99M75
Length = 473
Score = 156 (60.0 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 39/110 (35%), Positives = 57/110 (51%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
R L++L+ L + N ++ L LT L H N+I + +H+FR L +L L L
Sbjct: 151 RGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLH 210
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
N + V + L L TL L N L L +++ PL+SLQ LRL+DN
Sbjct: 211 QNHVARVHPHAFRDLGRLMTLYLFANNLSMLPAEVLVPLRSLQYLRLNDN 260
Score = 114 (45.2 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 37/122 (30%), Positives = 53/122 (43%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T R L L L + + G GL L L N + L D++FR L L+HL
Sbjct: 125 TFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLF 184
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
L NRI +V + L +L L L N + + L L L L N++SM+ +
Sbjct: 185 LHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNLSMLPAE 244
Query: 126 VI 127
V+
Sbjct: 245 VL 246
Score = 111 (44.1 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 36/121 (29%), Positives = 55/121 (45%)
Query: 21 NQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN-RIVAVSGASL 79
N+ S V + LT L H N + ++ +F L+ L LDL+ N ++ V +
Sbjct: 67 NRISYVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTF 126
Query: 80 AHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTLTLS 139
L +L TL L L+ L L L +LQ L L DN++ + + D +T L L
Sbjct: 127 RGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLH 186
Query: 140 G 140
G
Sbjct: 187 G 187
Score = 104 (41.7 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 38/130 (29%), Positives = 56/130 (43%)
Query: 10 LSSLKVLSIAHN-QFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 68
L+ L+ L ++ N Q V GL L +L + L FR L+ L +L L
Sbjct: 104 LTLLEQLDLSDNAQLRVVDPTTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQD 163
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
N + A+ + L NLT L L N + ++ + L SL L L N ++ V P
Sbjct: 164 NNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFR 223
Query: 129 DNVTITTLTL 138
D + TL L
Sbjct: 224 DLGRLMTLYL 233
>MGI|MGI:3605040 [details] [associations]
symbol:Lrrc24 "leucine rich repeat containing 24"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:3605040 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
eggNOG:NOG255871 GeneTree:ENSGT00700000104028 CTD:441381
HOGENOM:HOG000234857 HOVERGEN:HBG079563 OMA:NITLAHA
OrthoDB:EOG4DR9CG EMBL:AK048678 EMBL:AK078176 EMBL:BC116884
EMBL:BC116886 IPI:IPI00221813 RefSeq:NP_932787.1 UniGene:Mm.289666
ProteinModelPortal:Q8BHA1 SMR:Q8BHA1 PRIDE:Q8BHA1
Ensembl:ENSMUST00000049956 GeneID:378937 KEGG:mmu:378937
UCSC:uc007wme.1 InParanoid:Q14AD4 NextBio:401012 Bgee:Q8BHA1
CleanEx:MM_LRRC24 Genevestigator:Q8BHA1
GermOnline:ENSMUSG00000033707 Uniprot:Q8BHA1
Length = 521
Score = 156 (60.0 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 40/102 (39%), Positives = 56/102 (54%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
L++ N+ +R GA GL +L L NQ+ L D +F L L L L N I +
Sbjct: 111 LALTGNRLRGLRGGAFVGLVQLRVLYLAGNQLAKLLDFTFLHLPRLQELHLQENSIELLE 170
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
+LA LS+L LDLS N L ++++ + PL SLQ LRL +N
Sbjct: 171 DQALAGLSSLALLDLSRNQLGTISKEALQPLSSLQVLRLTEN 212
Score = 138 (53.6 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 39/126 (30%), Positives = 58/126 (46%)
Query: 14 KVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVA 73
+ L + N + + +G+LA L L L H+N + LE +FRA L L L NR+
Sbjct: 61 QTLFLQDNSIAHLEQGSLAPLAALRHLYLHNNTLRALESGAFRAQPRLLELALTGNRLRG 120
Query: 74 VSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTI 133
+ G + L L L L+ N L L L LQEL L +N I ++ + ++
Sbjct: 121 LRGGAFVGLVQLRVLYLAGNQLAKLLDFTFLHLPRLQELHLQENSIELLEDQALAGLSSL 180
Query: 134 TTLTLS 139
L LS
Sbjct: 181 ALLDLS 186
Score = 122 (48.0 bits), Expect = 9.3e-07, P = 9.3e-07
Identities = 30/84 (35%), Positives = 47/84 (55%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L+VL +A NQ + + L +L L N I++LED + LS+L+ LDL+ N
Sbjct: 129 LVQLRVLYLAGNQLAKLLDFTFLHLPRLQELHLQENSIELLEDQALAGLSSLALLDLSRN 188
Query: 70 RIVAVSGASLAHLSNLTTLDLSHN 93
++ +S +L LS+L L L+ N
Sbjct: 189 QLGTISKEALQPLSSLQVLRLTEN 212
Score = 104 (41.7 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 32/130 (24%), Positives = 58/130 (44%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L++L+ L + +N ++ GA +L L+ N++ L +F L L L LA N
Sbjct: 81 LAALRHLYLHNNTLRALESGAFRAQPRLLELALTGNRLRGLRGGAFVGLVQLRVLYLAGN 140
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
++ + + HL L L L N + L + L SL L L N + ++ + +
Sbjct: 141 QLAKLLDFTFLHLPRLQELHLQENSIELLEDQALAGLSSLALLDLSRNQLGTISKEALQP 200
Query: 130 NVTITTLTLS 139
++ L L+
Sbjct: 201 LSSLQVLRLT 210
>MGI|MGI:2136886 [details] [associations]
symbol:Rtn4r "reticulon 4 receptor" species:10090 "Mus
musculus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0007409 "axonogenesis"
evidence=IDA] [GO:0009986 "cell surface" evidence=ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0031225 "anchored to membrane"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2136886
GO:GO:0005783 GO:GO:0005886 GO:GO:0009986 GO:GO:0031225
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101803 HOGENOM:HOG000116109
HOVERGEN:HBG063707 CTD:65078 KO:K16659 EMBL:AF283462 EMBL:BC052317
EMBL:BC058381 IPI:IPI00121067 RefSeq:NP_075358.1 UniGene:Mm.40149
ProteinModelPortal:Q99PI8 SMR:Q99PI8 MINT:MINT-188355 STRING:Q99PI8
PRIDE:Q99PI8 Ensembl:ENSMUST00000059589 GeneID:65079 KEGG:mmu:65079
UCSC:uc007ymv.1 InParanoid:Q99PI8 OMA:PLWAWLQ OrthoDB:EOG4MGS7M
NextBio:320259 Bgee:Q99PI8 CleanEx:MM_RTN4R Genevestigator:Q99PI8
GermOnline:ENSMUSG00000043811 Uniprot:Q99PI8
Length = 473
Score = 155 (59.6 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 39/110 (35%), Positives = 57/110 (51%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
R L++L+ L + N ++ L LT L H N+I + +H+FR L +L L L
Sbjct: 151 RGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLH 210
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
N + V + L L TL L N L L +++ PL+SLQ LRL+DN
Sbjct: 211 QNHVARVHPHAFRDLGRLMTLYLFANNLSMLPAEVLMPLRSLQYLRLNDN 260
Score = 117 (46.2 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 38/121 (31%), Positives = 55/121 (45%)
Query: 21 NQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLA 80
N+ S V + LT L H N + ++ +F L+ L LDL+ N + V +
Sbjct: 67 NRISHVPAASFQSCRNLTILWLHSNALARIDAAAFTGLTLLEQLDLSDNAQLHVVDPTTF 126
Query: 81 H-LSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTLTLS 139
H L +L TL L LR L L L +LQ L L DN++ + + D +T L L
Sbjct: 127 HGLGHLHTLHLDRCGLRELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLH 186
Query: 140 G 140
G
Sbjct: 187 G 187
Score = 108 (43.1 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 36/122 (29%), Positives = 52/122 (42%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T L L L + + G GL L L N + L D++FR L L+HL
Sbjct: 125 TFHGLGHLHTLHLDRCGLRELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLF 184
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
L NRI +V + L +L L L N + + L L L L N++SM+ +
Sbjct: 185 LHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNLSMLPAE 244
Query: 126 VI 127
V+
Sbjct: 245 VL 246
Score = 101 (40.6 bits), Expect = 0.00059, P = 0.00059
Identities = 38/130 (29%), Positives = 56/130 (43%)
Query: 10 LSSLKVLSIAHN-QFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 68
L+ L+ L ++ N Q V GL L +L + L FR L+ L +L L
Sbjct: 104 LTLLEQLDLSDNAQLHVVDPTTFHGLGHLHTLHLDRCGLRELGPGLFRGLAALQYLYLQD 163
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
N + A+ + L NLT L L N + ++ + L SL L L N ++ V P
Sbjct: 164 NNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFR 223
Query: 129 DNVTITTLTL 138
D + TL L
Sbjct: 224 DLGRLMTLYL 233
>UNIPROTKB|F1RHM5 [details] [associations]
symbol:RTN4R "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0009986 "cell surface" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005783 GO:GO:0005886
GO:GO:0009986 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101803 OMA:PLWAWLQ EMBL:CT737345
Ensembl:ENSSSCT00000011101 Uniprot:F1RHM5
Length = 473
Score = 155 (59.6 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 40/110 (36%), Positives = 59/110 (53%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
R L++L+ L + N ++ A L LT L H N+I + + +FR L +L L L
Sbjct: 151 RGLAALQYLYLQDNGLQALPDDAFRDLGNLTHLFLHGNRIPSVPERAFRGLHSLDRLLLH 210
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
NR+ V + L L TL L N L AL+ + + PL++LQ LRL+DN
Sbjct: 211 QNRVAHVHPHAFRDLGRLMTLYLFANNLSALSAEALAPLRALQYLRLNDN 260
Score = 115 (45.5 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 38/121 (31%), Positives = 54/121 (44%)
Query: 21 NQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN-RIVAVSGASL 79
N+ + V + LT L H N + ++ +F L L LDL+ N ++ AV A+
Sbjct: 67 NRITYVPAASFRACRNLTILWLHSNALARIDATAFAGLVLLEQLDLSDNAQLRAVDPATF 126
Query: 80 AHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTLTLS 139
L L TL L L+ L L L +LQ L L DN + + D D +T L L
Sbjct: 127 RGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNGLQALPDDAFRDLGNLTHLFLH 186
Query: 140 G 140
G
Sbjct: 187 G 187
Score = 104 (41.7 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 37/127 (29%), Positives = 56/127 (44%)
Query: 13 LKVLSIAHN-QFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
L+ L ++ N Q +V GL +L +L + L FR L+ L +L L N +
Sbjct: 107 LEQLDLSDNAQLRAVDPATFRGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNGL 166
Query: 72 VAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNV 131
A+ + L NLT L L N + ++ + L SL L L N ++ V P D
Sbjct: 167 QALPDDAFRDLGNLTHLFLHGNRIPSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLG 226
Query: 132 TITTLTL 138
+ TL L
Sbjct: 227 RLMTLYL 233
Score = 100 (40.3 bits), Expect = 0.00094, P = 0.00094
Identities = 35/122 (28%), Positives = 51/122 (41%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T R L L L + + G GL L L N + L D +FR L L+HL
Sbjct: 125 TFRGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNGLQALPDDAFRDLGNLTHLF 184
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
L NRI +V + L +L L L N + + L L L L N++S ++ +
Sbjct: 185 LHGNRIPSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALSAE 244
Query: 126 VI 127
+
Sbjct: 245 AL 246
>MGI|MGI:2685352 [details] [associations]
symbol:Podnl1 "podocan-like 1" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005576 "extracellular
region" evidence=IEA] [GO:0005578 "proteinaceous extracellular
matrix" evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2685352
GO:GO:0005578 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00600000084286
HSSP:P07359 HOVERGEN:HBG059195 OrthoDB:EOG42V8FX
HOGENOM:HOG000231119 CTD:79883 EMBL:DQ303463 EMBL:BC063764
IPI:IPI00420321 RefSeq:NP_001013402.2 UniGene:Mm.334654
ProteinModelPortal:Q6P3Y9 SMR:Q6P3Y9 PhosphoSite:Q6P3Y9
PRIDE:Q6P3Y9 Ensembl:ENSMUST00000093380 GeneID:244550
KEGG:mmu:244550 UCSC:uc012gha.1 InParanoid:Q6P3Y9 NextBio:386307
Bgee:Q6P3Y9 CleanEx:MM_PODNL1 Genevestigator:Q6P3Y9 Uniprot:Q6P3Y9
Length = 568
Score = 156 (60.0 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 49/120 (40%), Positives = 63/120 (52%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
RRL +L+ L +A NQ + + G A L SL NQ+ LE L+ L L+LA
Sbjct: 398 RRLRALRSLDLAGNQLTRLPEGLPASL---RSLRLQRNQLRTLEPEQLAGLNKLRELNLA 454
Query: 68 HNRI-VAVSGASLAH-LSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
HNR+ V G H L L LDLSHN L + DL P ++L+EL L N IS V P+
Sbjct: 455 HNRLRVGDIGPGTWHELQALKVLDLSHNELSFVPPDL--P-EALEELYLQANRISHVGPE 511
Score = 117 (46.2 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 38/111 (34%), Positives = 57/111 (51%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI-DV-LEDHSFRALSTLSHLDLAH 68
+SL+ L + +N S V RGAL+ L L HNQ+ D L+ +F LS+L +LDL+H
Sbjct: 209 ASLERLHLQNNLISKVPRGALSLQTHLRELYLQHNQLTDSGLDATTFSKLSSLEYLDLSH 268
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
N++ V L LT L L N +R + + + L+ L L N +
Sbjct: 269 NQLATVP-EGLP--GTLTILHLGRNCIRHVEAVRLHKARGLRYLLLQHNKL 316
Score = 101 (40.6 bits), Expect = 0.00076, P = 0.00076
Identities = 37/119 (31%), Positives = 59/119 (49%)
Query: 12 SLKVLSIAHNQFSS--VRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
+L L++A+N +S V A L L SL NQ+ L + ++L L L N
Sbjct: 376 ALAELNLAYNSLASAHVHPSAFRRLRALRSLDLAGNQLTRLPEG---LPASLRSLRLQRN 432
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRA--LTQDLITPLKSLQELRLDDNDISMVTPDV 126
++ + LA L+ L L+L+HN LR + L++L+ L L N++S V PD+
Sbjct: 433 QLRTLEPEQLAGLNKLRELNLAHNRLRVGDIGPGTWHELQALKVLDLSHNELSFVPPDL 491
>MGI|MGI:3045213 [details] [associations]
symbol:Tlr13 "toll-like receptor 13" species:10090 "Mus
musculus" [GO:0002755 "MyD88-dependent toll-like receptor signaling
pathway" evidence=IGI] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0009615 "response to virus"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IDA] [GO:0034178 "toll-like receptor 13 signaling pathway"
evidence=IDA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0043408 "regulation of MAPK cascade"
evidence=IGI] [GO:0045087 "innate immune response" evidence=IDA]
Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR027196 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 MGI:MGI:3045213 GO:GO:0016021 GO:GO:0042803
GO:GO:0005768 GO:GO:0006954 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 GO:GO:0045087 GO:GO:0010008 GO:GO:0009615
GO:GO:0019843 GO:GO:0002755 EMBL:AL672288 GO:GO:0043408
EMBL:CH466564 SUPFAM:SSF52200 EMBL:AY510706 EMBL:AK170044
EMBL:BC117913 EMBL:BC117914 IPI:IPI00342691 RefSeq:NP_991389.1
UniGene:Mm.336203 ProteinModelPortal:Q6R5N8 SMR:Q6R5N8
STRING:Q6R5N8 PhosphoSite:Q6R5N8 PRIDE:Q6R5N8
Ensembl:ENSMUST00000040065 GeneID:279572 KEGG:mmu:279572 CTD:279572
GeneTree:ENSGT00680000099674 HOGENOM:HOG000203220
HOVERGEN:HBG094977 InParanoid:Q6R5N8 OrthoDB:EOG4XGZZS
NextBio:393989 Bgee:Q6R5N8 CleanEx:MM_TLR13 Genevestigator:Q6R5N8
GermOnline:ENSMUSG00000033777 GO:GO:0034178 PANTHER:PTHR24367:SF26
Uniprot:Q6R5N8
Length = 991
Score = 159 (61.0 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 44/135 (32%), Positives = 63/135 (46%)
Query: 4 WCTVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 63
W +++ L+SL ++HN+F S A + L L LS N I L + +F L L
Sbjct: 416 WSSLQNLTSL---DLSHNKFKSFPDFAFSPLKHLEFLSLSRNPITELNNLAFSGLFALKE 472
Query: 64 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVT 123
L+LA IV + S NL LDL N +R L PLK LQ L L N + ++
Sbjct: 473 LNLAACWIVTIDRYSFTQFPNLEVLDLGDNNIRTLNHGTFRPLKKLQSLILSHNCLKILE 532
Query: 124 PDVIGDNVTITTLTL 138
P+ + +L L
Sbjct: 533 PNSFSGLTNLRSLDL 547
Score = 144 (55.7 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 37/105 (35%), Positives = 57/105 (54%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
L++ HN+ + + L L L N I +++ +FR L L+ L+L N+I +V+
Sbjct: 108 LNLTHNEIQVLPPWSFTNLSALVDLRLEWNSIWKIDEGAFRGLENLTLLNLVENKIQSVN 167
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
S LS+L TL LSHN + + +D TPL L+ L L N+IS
Sbjct: 168 N-SFEGLSSLKTLLLSHNQITHIHKDAFTPLIKLKYLSLSRNNIS 211
Score = 121 (47.7 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 37/114 (32%), Positives = 56/114 (49%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
R L +L +L++ N+ SV + GL L +L HNQI + +F L L +L L+
Sbjct: 148 RGLENLTLLNLVENKIQSVNN-SFEGLSSLKTLLLSHNQITHIHKDAFTPLIKLKYLSLS 206
Query: 68 HNRIVAVSGA--SLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
N I SG ++ HL L LDL++N + L + L SL L + N +
Sbjct: 207 RNNISDFSGILEAVQHLPCLERLDLTNNSIMYLDHSPRS-LVSLTHLSFEGNKL 259
Score = 120 (47.3 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 43/139 (30%), Positives = 66/139 (47%)
Query: 4 WCTVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 63
W + LS+L L + N + GA GL+ LT L+ N+I + ++SF LS+L
Sbjct: 121 W-SFTNLSALVDLRLEWNSIWKIDEGAFRGLENLTLLNLVENKIQSV-NNSFEGLSSLKT 178
Query: 64 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDL--ITPLKSLQELRLDDNDISM 121
L L+HN+I + + L L L LS N + + L + L L+ L L +N I M
Sbjct: 179 LLLSHNQITHIHKDAFTPLIKLKYLSLSRNNISDFSGILEAVQHLPCLERLDLTNNSI-M 237
Query: 122 VTPDVIGDNVTITTLTLSG 140
V++T L+ G
Sbjct: 238 YLDHSPRSLVSLTHLSFEG 256
Score = 116 (45.9 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 34/111 (30%), Positives = 54/111 (48%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L+ LS++ N + + A +GL L L+ I ++ +SF L LDL N
Sbjct: 443 LKHLEFLSLSRNPITELNNLAFSGLFALKELNLAACWIVTIDRYSFTQFPNLEVLDLGDN 502
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
I ++ + L L +L LSHN L+ L + + L +L+ L L N +S
Sbjct: 503 NIRTLNHGTFRPLKKLQSLILSHNCLKILEPNSFSGLTNLRSLDLMYNSLS 553
Score = 116 (45.9 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 35/112 (31%), Positives = 54/112 (48%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQ-IDVLEDHSFRALSTLSHLDLAH 68
L L+ L N ++ LA +L L N + L D F AL +L L+L
Sbjct: 346 LPKLETLVFQKNVTNAEGIKQLAKCTRLLFLDLGQNSDLIYLNDSEFNALPSLQKLNLNK 405
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
++ ++ + + L NLT+LDLSHN ++ +PLK L+ L L N I+
Sbjct: 406 CQLSFINNRTWSSLQNLTSLDLSHNKFKSFPDFAFSPLKHLEFLSLSRNPIT 457
Score = 116 (45.9 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 36/114 (31%), Positives = 55/114 (48%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L +LK L++A ++ R + L L N I L +FR L L L L+HN
Sbjct: 467 LFALKELNLAACWIVTIDRYSFTQFPNLEVLDLGDNNIRTLNHGTFRPLKKLQSLILSHN 526
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVT 123
+ + S + L+NL +LDL +N L + L + L+ L L+L N I+ T
Sbjct: 527 CLKILEPNSFSGLTNLRSLDLMYNSLSYFHEHLFSGLEKLLILKLGFNKITYET 580
Score = 115 (45.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 35/111 (31%), Positives = 55/111 (49%)
Query: 30 ALAGLDKLTS-LSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTL 88
A++ + + T+ L+ HN+I VL SF LS L L L N I + + L NLT L
Sbjct: 97 AISDIPRYTTHLNLTHNEIQVLPPWSFTNLSALVDLRLEWNSIWKIDEGAFRGLENLTLL 156
Query: 89 DLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTLTLS 139
+L N ++++ L SL+ L L N I+ + D + + L+LS
Sbjct: 157 NLVENKIQSVNNSF-EGLSSLKTLLLSHNQITHIHKDAFTPLIKLKYLSLS 206
Score = 114 (45.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 32/110 (29%), Positives = 53/110 (48%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L SL+ L++ Q S + + L LTSL HN+ D +F L L L L+ N
Sbjct: 395 LPSLQKLNLNKCQLSFINNRTWSSLQNLTSLDLSHNKFKSFPDFAFSPLKHLEFLSLSRN 454
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
I ++ + + L L L+L+ ++ + + T +L+ L L DN+I
Sbjct: 455 PITELNNLAFSGLFALKELNLAACWIVTIDRYSFTQFPNLEVLDLGDNNI 504
Score = 114 (45.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 38/142 (26%), Positives = 62/142 (43%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T R L L+ L ++HN + + +GL L SL +N + +H F L L L
Sbjct: 511 TFRPLKKLQSLILSHNCLKILEPNSFSGLTNLRSLDLMYNSLSYFHEHLFSGLEKLLILK 570
Query: 66 LAHNRIVAVSGASLAH-----LSNLTTLDLS--HNFLRALTQDLITPLKSLQELRLDDND 118
L N+I + +L + L +L L+L + ++ + + L SLQEL L N
Sbjct: 571 LGFNKITYETTRTLQYPPFIKLKSLKQLNLEGQRHGIQVVPSNFFQGLGSLQELLLGKNP 630
Query: 119 ISMVTPDVIGDNVTITTLTLSG 140
+ + +T L +SG
Sbjct: 631 SVFLDHHQFDPLINLTKLDISG 652
Score = 113 (44.8 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 42/135 (31%), Positives = 64/135 (47%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID----VLEDHSFRALSTLSHLD 65
LSSLK L ++HNQ + + + A L KL LS N I +LE + + L L LD
Sbjct: 173 LSSLKTLLLSHNQITHIHKDAFTPLIKLKYLSLSRNNISDFSGILE--AVQHLPCLERLD 230
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
L +N I+ + + + L +LT L N LR L ++ L +L L N ++
Sbjct: 231 LTNNSIMYLDHSPRS-LVSLTHLSFEGNKLRELNFSALS-LPNLTNLSASRNGNKVIQNV 288
Query: 126 VIGDNVTITTLTLSG 140
+ + +L LSG
Sbjct: 289 YLKTLPQLKSLNLSG 303
Score = 105 (42.0 bits), Expect = 0.00014, P = 0.00014
Identities = 37/115 (32%), Positives = 57/115 (49%)
Query: 10 LSSLKVLSIAHNQ---FSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
L LK LS++ N FS + A+ L L L +N I L DHS R+L +L+HL
Sbjct: 197 LIKLKYLSLSRNNISDFSGILE-AVQHLPCLERLDLTNNSIMYL-DHSPRSLVSLTHLSF 254
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISM 121
N++ ++ ++L+ L NLT L S N + + + L L+ L L I +
Sbjct: 255 EGNKLRELNFSALS-LPNLTNLSASRNGNKVIQNVYLKTLPQLKSLNLSGTVIKL 308
>MGI|MGI:1914394 [details] [associations]
symbol:Lrrc40 "leucine rich repeat containing 40"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1914394 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00700000104287 CTD:55631 HOGENOM:HOG000005761
HOVERGEN:HBG081930 OrthoDB:EOG4M65HK InterPro:IPR015766
PANTHER:PTHR23155:SF28 EMBL:AK011726 EMBL:AK017814 EMBL:AK034978
EMBL:AK163288 IPI:IPI00470138 RefSeq:NP_077156.2 UniGene:Mm.358704
ProteinModelPortal:Q9CRC8 SMR:Q9CRC8 STRING:Q9CRC8
PhosphoSite:Q9CRC8 PaxDb:Q9CRC8 PRIDE:Q9CRC8
Ensembl:ENSMUST00000072080 GeneID:67144 KEGG:mmu:67144
UCSC:uc008rvu.1 InParanoid:Q9CRC8 NextBio:323714 Bgee:Q9CRC8
CleanEx:MM_LRRC40 Genevestigator:Q9CRC8
GermOnline:ENSMUSG00000063052 Uniprot:Q9CRC8
Length = 602
Score = 156 (60.0 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 43/125 (34%), Positives = 68/125 (54%)
Query: 2 SIWCTVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTL 61
S+ +R L +L+ L+++HN+ + + L L +L HN++ + + F LS L
Sbjct: 119 SLPSAIRELDNLQKLNVSHNKLKILPE-EITSLKNLRTLHLQHNELTCIPE-GFEHLSCL 176
Query: 62 SHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISM 121
LDL+ NR+ V A A LS+L L+LS N L+ L + I+ +K L+ L D N +
Sbjct: 177 EDLDLSSNRLATVP-ADFALLSSLLRLNLSSNQLKNLPAE-ISRMKRLKHLDCDANLLET 234
Query: 122 VTPDV 126
V PDV
Sbjct: 235 VPPDV 239
Score = 138 (53.6 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 40/120 (33%), Positives = 58/120 (48%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
+R L +L VL I NQ +S+ A+ LD L L+ HN++ +L + +L L L L
Sbjct: 101 LRLLPALTVLDIHDNQLTSLP-SAIRELDNLQKLNVSHNKLKILPEE-ITSLKNLRTLHL 158
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDV 126
HN + + HLS L LDLS N L + D L SL L L N + + ++
Sbjct: 159 QHNELTCIP-EGFEHLSCLEDLDLSSNRLATVPADFAL-LSSLLRLNLSSNQLKNLPAEI 216
Score = 129 (50.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 42/134 (31%), Positives = 67/134 (50%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
+ R+ LK L N +V + ++ L L N++ VL + F + L L L
Sbjct: 216 ISRMKRLKHLDCDANLLETVPPD-VGSMESLELLYLRRNKLRVLPE--FPSCRQLKELHL 272
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDV 126
A N+I + L HL + LDL N LR++ +++ L+SL+ L L +NDIS + P
Sbjct: 273 AENQIEKLGAEHLQHLQAILVLDLRGNKLRSVPEEMAL-LQSLERLDLSNNDISSL-PCS 330
Query: 127 IGDNVTITTLTLSG 140
+G N+ + L L G
Sbjct: 331 LG-NLHLKFLALEG 343
Score = 118 (46.6 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 30/86 (34%), Positives = 50/86 (58%)
Query: 37 LTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLR 96
LT L N++ L D R L L+ LD+ N++ ++ A + L NL L++SHN L+
Sbjct: 84 LTKLIISSNKLQSLSD-DLRLLPALTVLDIHDNQLTSLPSA-IRELDNLQKLNVSHNKLK 141
Query: 97 ALTQDLITPLKSLQELRLDDNDISMV 122
L ++ IT LK+L+ L L N+++ +
Sbjct: 142 ILPEE-ITSLKNLRTLHLQHNELTCI 166
Score = 106 (42.4 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 40/141 (28%), Positives = 72/141 (51%)
Query: 5 CTV-RRLSSLK--VLSI--AHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALS 59
C + +R+ LK VL I + N+ S + L L KLT L +N + L + +L+
Sbjct: 438 CEIPQRIVELKEMVLDINLSFNKLSFISH-ELCLLQKLTFLDLRNNFLSSLPEE-MSSLT 495
Query: 60 TLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
L ++L+ NR V L +S L + +S+N + ++ + +++L L L +ND+
Sbjct: 496 KLQTINLSFNRF-KVFPEVLYRISTLEAVLISNNQVGSVDPQKMKLMENLNTLDLQNNDL 554
Query: 120 SMVTPDVIGDNVTITTLTLSG 140
+ P+ +G+ V + TL L G
Sbjct: 555 LQIPPE-LGNCVQLRTLLLDG 574
Score = 102 (41.0 bits), Expect = 0.00032, P = 0.00032
Identities = 31/108 (28%), Positives = 58/108 (53%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L L + +N SS+ ++ L KL +++ N+ V + +R +STL + +++N
Sbjct: 471 LQKLTFLDLRNNFLSSLPE-EMSSLTKLQTINLSFNRFKVFPEVLYR-ISTLEAVLISNN 528
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
++ +V + + NL TLDL +N L + +L ++ L+ L LD N
Sbjct: 529 QVGSVDPQKMKLMENLNTLDLQNNDLLQIPPELGNCVQ-LRTLLLDGN 575
>UNIPROTKB|Q7Z2Q7 [details] [associations]
symbol:LRRC70 "Leucine-rich repeat-containing protein 70"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
GO:GO:0016021 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 InterPro:IPR000372 SMART:SM00013
EMBL:CH471137 HSSP:P24014 UniGene:Hs.482269 EMBL:AY280614
EMBL:AY358733 EMBL:AK123022 IPI:IPI00884949 RefSeq:NP_852607.3
UniGene:Hs.721348 ProteinModelPortal:Q7Z2Q7 SMR:Q7Z2Q7
STRING:Q7Z2Q7 PhosphoSite:Q7Z2Q7 DMDM:74759111 PRIDE:Q7Z2Q7
Ensembl:ENST00000334994 GeneID:100130733 KEGG:hsa:100130733
UCSC:uc011cqs.1 CTD:100130733 GeneCards:GC05P061912 HGNC:HGNC:35155
HPA:HPA013409 neXtProt:NX_Q7Z2Q7 PharmGKB:PA164722127
HOGENOM:HOG000113389 OMA:IYLKLDR OrthoDB:EOG42FSH5
GenomeRNAi:100130733 NextBio:20789232 ArrayExpress:Q7Z2Q7
Bgee:Q7Z2Q7 Genevestigator:Q7Z2Q7 Uniprot:Q7Z2Q7
Length = 622
Score = 156 (60.0 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 43/133 (32%), Positives = 67/133 (50%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
+ L +L L + N + V A L L LS HN I+ ++ +F+ L+ L +L L
Sbjct: 201 QHLENLACLYLGSNNLTKVPSNAFEVLKSLRRLSLSHNPIEAIQPFAFKGLANLEYLLLK 260
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI 127
++RI V+ + ++NL L LSHN L L D + LK+L L+LD N I + D
Sbjct: 261 NSRIRNVTRDGFSGINNLKHLILSHNDLENLNSDTFSLLKNLIYLKLDRNRIISIDNDTF 320
Query: 128 GD-NVTITTLTLS 139
+ ++ L LS
Sbjct: 321 ENMGASLKILNLS 333
Score = 151 (58.2 bits), Expect = 9.2e-10, P = 9.2e-10
Identities = 39/115 (33%), Positives = 58/115 (50%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L +L+ L + +NQ S V RG L + L+ N++ VL +F + L LDL++N
Sbjct: 131 LLNLRNLYLQYNQVSFVPRGVFNDLVSVQYLNLQRNRLTVLGSGTFVGMVALRILDLSNN 190
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTP 124
I+ +S + HL NL L L N L + + LKSL+ L L N I + P
Sbjct: 191 NILRISESGFQHLENLACLYLGSNNLTKVPSNAFEVLKSLRRLSLSHNPIEAIQP 245
Score = 139 (54.0 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 33/109 (30%), Positives = 61/109 (55%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L++L+ L + +++ +V R +G++ L L HN ++ L +F L L +L L N
Sbjct: 251 LANLEYLLLKNSRIRNVTRDGFSGINNLKHLILSHNDLENLNSDTFSLLKNLIYLKLDRN 310
Query: 70 RIVAVSGASLAHL-SNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
RI+++ + ++ ++L L+LS N L AL ++ PL SL L+ + N
Sbjct: 311 RIISIDNDTFENMGASLKILNLSFNNLTALHPRVLKPLSSLIHLQANSN 359
Score = 130 (50.8 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 30/114 (26%), Positives = 58/114 (50%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
+L++L +++N + L+ L L N + + ++F L +L L L+HN I
Sbjct: 181 ALRILDLSNNNILRISESGFQHLENLACLYLGSNNLTKVPSNAFEVLKSLRRLSLSHNPI 240
Query: 72 VAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
A+ + L+NL L L ++ +R +T+D + + +L+ L L ND+ + D
Sbjct: 241 EAIQPFAFKGLANLEYLLLKNSRIRNVTRDGFSGINNLKHLILSHNDLENLNSD 294
Score = 112 (44.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 33/116 (28%), Positives = 55/116 (47%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L S++ L++ N+ + + G G+ L L +N I + + F+ L L+ L L N
Sbjct: 155 LVSVQYLNLQRNRLTVLGSGTFVGMVALRILDLSNNNILRISESGFQHLENLACLYLGSN 214
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
+ V + L +L L LSHN + A+ L +L+ L L ++ I VT D
Sbjct: 215 NLTKVPSNAFEVLKSLRRLSLSHNPIEAIQPFAFKGLANLEYLLLKNSRIRNVTRD 270
Score = 106 (42.4 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 32/131 (24%), Positives = 62/131 (47%)
Query: 9 RLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 68
+L L L + +N + G GL L +L +NQ+ + F L ++ +L+L
Sbjct: 106 QLRHLYFLFLNNNFIKRLDPGIFKGLLNLRNLYLQYNQVSFVPRGVFNDLVSVQYLNLQR 165
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
NR+ + + + L LDLS+N + +++ L++L L L N+++ V +
Sbjct: 166 NRLTVLGSGTFVGMVALRILDLSNNNILRISESGFQHLENLACLYLGSNNLTKVPSNAFE 225
Query: 129 DNVTITTLTLS 139
++ L+LS
Sbjct: 226 VLKSLRRLSLS 236
>UNIPROTKB|A5H649 [details] [associations]
symbol:TLR3 "Toll-like receptor 3" species:9913 "Bos
taurus" [GO:0071260 "cellular response to mechanical stimulus"
evidence=IEA] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=IEA] [GO:0046330 "positive
regulation of JNK cascade" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045359 "positive regulation of interferon-beta
biosynthetic process" evidence=IEA] [GO:0045356 "positive
regulation of interferon-alpha biosynthetic process" evidence=IEA]
[GO:0045080 "positive regulation of chemokine biosynthetic process"
evidence=IEA] [GO:0045078 "positive regulation of interferon-gamma
biosynthetic process" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0043123 "positive regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA] [GO:0042346
"positive regulation of NF-kappaB import into nucleus"
evidence=IEA] [GO:0034346 "positive regulation of type III
interferon production" evidence=IEA] [GO:0034123 "positive
regulation of toll-like receptor signaling pathway" evidence=IEA]
[GO:0032760 "positive regulation of tumor necrosis factor
production" evidence=IEA] [GO:0032757 "positive regulation of
interleukin-8 production" evidence=IEA] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IEA] [GO:0032735
"positive regulation of interleukin-12 production" evidence=IEA]
[GO:0032728 "positive regulation of interferon-beta production"
evidence=IEA] [GO:0032722 "positive regulation of chemokine
production" evidence=IEA] [GO:0007252 "I-kappaB phosphorylation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0051607 "defense response
to virus" evidence=IEA] [GO:0050729 "positive regulation of
inflammatory response" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0034138 "toll-like receptor 3 signaling
pathway" evidence=IEA] [GO:0004888 "transmembrane signaling
receptor activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0002756 "MyD88-independent toll-like
receptor signaling pathway" evidence=IEA] InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 GO:GO:0016021 GO:GO:0005737
GO:GO:0006952 GO:GO:0043123 GO:GO:0046330 GO:GO:0045944
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0032722 GO:GO:0032755 GO:GO:0009615 GO:GO:0051092
GO:GO:0032757 GO:GO:0071260 InterPro:IPR000372 SMART:SM00013
GO:GO:0032760 GO:GO:0043330 GO:GO:0032735 GO:GO:0042346
GO:GO:0045078 GO:GO:0032728 GO:GO:0007252 GO:GO:0045080
SUPFAM:SSF52200 GO:GO:0045359 GeneTree:ENSGT00680000099674
GO:GO:0034123 IPI:IPI00713414 UniGene:Bt.12298 HOVERGEN:HBG023181
PANTHER:PTHR24365:SF5 GO:GO:0045356 GO:GO:0034346 EMBL:DAAA02060200
EMBL:EF076741 EMBL:EF076742 EMBL:EF076745 EMBL:EF076746
EMBL:EF076749 STRING:A5H649 Ensembl:ENSBTAT00000011445
InParanoid:A5H649 OMA:WINKTHT Uniprot:A5H649
Length = 904
Score = 158 (60.7 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 47/134 (35%), Positives = 63/134 (47%)
Query: 9 RLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 68
R S L +L N S + L L L+ HN+I L D +F L+ L L
Sbjct: 74 RYSQLTILDGGFNSISKLEPELCQSLPWLEILNLQHNEISQLSDKTFIFCMNLTELHLMS 133
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTP---D 125
N I + +L NL LDLSHN L + L++LQEL L +N IS +TP D
Sbjct: 134 NSIQKIKNDPFKNLKNLIKLDLSHNGLSSTKLGTQLQLENLQELLLSNNKISSLTPEEFD 193
Query: 126 VIGDNVTITTLTLS 139
+G N ++ L LS
Sbjct: 194 FLG-NSSLKRLELS 206
Score = 133 (51.9 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 45/140 (32%), Positives = 69/140 (49%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDK--LTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 68
+S++ LS++ NQ ++ GL + LT+L N + V+ + SF L L +L L +
Sbjct: 249 TSIENLSLSSNQLDTISHTTFDGLKQTNLTTLDLSRNSLRVMGNDSFAWLPHLEYLSLEY 308
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLR---ALTQ-----DLITP-LKSLQELRLDDNDI 119
N I +S S LSNL LDL +F R +LT D LK L+ L +DDN+
Sbjct: 309 NNIEHLSSRSFYGLSNLRRLDLRRSFTRQSISLTSLPKIDDFSFQWLKCLEYLNMDDNNF 368
Query: 120 SMVTPDVIGDNVTITTLTLS 139
+ + V + L+LS
Sbjct: 369 PGIKRNTFTGLVRLKFLSLS 388
Score = 122 (48.0 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 34/110 (30%), Positives = 52/110 (47%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
+++ VL++ HNQ + +LT L N I LE ++L L L+L HN
Sbjct: 52 TNITVLNLTHNQLRRLPPANFTRYSQLTILDGGFNSISKLEPELCQSLPWLEILNLQHNE 111
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
I +S + NLT L L N ++ + D LK+L +L L N +S
Sbjct: 112 ISQLSDKTFIFCMNLTELHLMSNSIQKIKNDPFKNLKNLIKLDLSHNGLS 161
Score = 120 (47.3 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 41/139 (29%), Positives = 65/139 (46%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL--EDHSFRALSTLSHLD 65
+ L +L L ++HN SS + G L+ L L +N+I L E+ F S+L L+
Sbjct: 145 KNLKNLIKLDLSHNGLSSTKLGTQLQLENLQELLLSNNKISSLTPEEFDFLGNSSLKRLE 204
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLR-ALTQDLITPLK--SLQELRLDDNDISMV 122
L+ N+I S L L+ L L++ L +LT+ L L S++ L L N + +
Sbjct: 205 LSSNQIKEFSPGCFHTLGELSGLSLNNAKLSPSLTEKLCLELSNTSIENLSLSSNQLDTI 264
Query: 123 TPDVIGD--NVTITTLTLS 139
+ +TTL LS
Sbjct: 265 SHTTFDGLKQTNLTTLDLS 283
Score = 112 (44.5 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 38/129 (29%), Positives = 58/129 (44%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHS-----FRALSTLS 62
R L +L +L +++N +++ L GL+KL L HN + L H+ + L L
Sbjct: 504 RPLPNLVILDLSNNNIANINDELLKGLEKLEILDLQHNNLARLWKHANPGGPVQFLKGLF 563
Query: 63 HL---DLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
HL +L N + + L L ++DL N L L Q + SL+ L L N I
Sbjct: 564 HLHILNLGSNGFDEIPVEAFKDLRELKSIDLGMNNLNILPQSVFDNQVSLKSLSLQKNLI 623
Query: 120 SMVTPDVIG 128
+ V V G
Sbjct: 624 TSVQKTVFG 632
>UNIPROTKB|O14498 [details] [associations]
symbol:ISLR "Immunoglobulin superfamily containing
leucine-rich repeat protein" species:9606 "Homo sapiens"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=TAS] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0005576 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0007155 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 eggNOG:NOG240332 OrthoDB:EOG4QC14W CTD:3671
HOGENOM:HOG000113109 HOVERGEN:HBG100853 OMA:HGKAVEG EMBL:AB003184
EMBL:AB024536 EMBL:AB024537 EMBL:AY358871 IPI:IPI00023648
RefSeq:NP_005536.1 RefSeq:NP_958934.1 UniGene:Hs.699822
UniGene:Hs.733168 ProteinModelPortal:O14498 SMR:O14498
STRING:O14498 PaxDb:O14498 PeptideAtlas:O14498 PRIDE:O14498
DNASU:3671 Ensembl:ENST00000249842 Ensembl:ENST00000395118
GeneID:3671 KEGG:hsa:3671 UCSC:uc002axg.1 GeneCards:GC15P074466
HGNC:HGNC:6133 HPA:HPA050811 MIM:602059 neXtProt:NX_O14498
PharmGKB:PA29933 InParanoid:O14498 PhylomeDB:O14498 ChiTaRS:ISLR
GenomeRNAi:3671 NextBio:14367 Bgee:O14498 CleanEx:HS_ISLR
Genevestigator:O14498 Uniprot:O14498
Length = 428
Score = 153 (58.9 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 41/135 (30%), Positives = 67/135 (49%)
Query: 5 CTVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHL 64
C ++ A+ SV G A + T+LS N++ L + +FR + L L
Sbjct: 23 CDCGEKYGFQIADCAYRDLESVPPGFPANV---TTLSLSANRLPGLPEGAFREVPLLQSL 79
Query: 65 DLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTP 124
LAHN I V+ +LA LS+L +LDLSHN + + L +LQ L++D N+++ +
Sbjct: 80 WLAHNEIRTVAAGALASLSHLKSLDLSHNLISDFAWSDLHNLSALQLLKMDSNELTFIPR 139
Query: 125 DVIGDNVTITTLTLS 139
D + +L L+
Sbjct: 140 DAFRSLRALRSLQLN 154
Score = 149 (57.5 bits), Expect = 8.1e-10, P = 8.1e-10
Identities = 37/110 (33%), Positives = 54/110 (49%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
R + L+ L +AHN+ +V GALA L L SL HN I LS L L +
Sbjct: 71 REVPLLQSLWLAHNEIRTVAAGALASLSHLKSLDLSHNLISDFAWSDLHNLSALQLLKMD 130
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
N + + + L L +L L+HN L L + TPL +L L++++N
Sbjct: 131 SNELTFIPRDAFRSLRALRSLQLNHNRLHTLAEGTFTPLTALSHLQINEN 180
Score = 127 (49.8 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 33/107 (30%), Positives = 57/107 (53%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
+++ LS++ N+ + GA + L SL HN+I + + +LS L LDL+HN
Sbjct: 50 ANVTTLSLSANRLPGLPEGAFREVPLLQSLWLAHNEIRTVAAGALASLSHLKSLDLSHNL 109
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
I + + L +LS L L + N L + +D L++L+ L+L+ N
Sbjct: 110 ISDFAWSDLHNLSALQLLKMDSNELTFIPRDAFRSLRALRSLQLNHN 156
Score = 110 (43.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 26/84 (30%), Positives = 41/84 (48%)
Query: 4 WCTVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 63
W + LS+L++L + N+ + + R A L L SL +HN++ L + +F L+ LSH
Sbjct: 115 WSDLHNLSALQLLKMDSNELTFIPRDAFRSLRALRSLQLNHNRLHTLAEGTFTPLTALSH 174
Query: 64 LDLAHNRIVAVSGASLAHLSNLTT 87
L + N G LTT
Sbjct: 175 LQINENPFDCTCGIVWLKTWALTT 198
>UNIPROTKB|F1LRE2 [details] [associations]
symbol:Igfals "Insulin-like growth factor-binding protein
complex acid labile subunit" species:10116 "Rattus norvegicus"
[GO:0005634 "nucleus" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
RGD:68429 GO:GO:0005634 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GeneTree:ENSGT00690000101816 IPI:IPI00202416
OMA:FCGLGEL Ensembl:ENSRNOT00000020233 ArrayExpress:F1LRE2
Uniprot:F1LRE2
Length = 602
Score = 155 (59.6 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 39/119 (32%), Positives = 60/119 (50%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T LS L+ L + N SS+ +LAGL +L L N++ L F+ L L +L
Sbjct: 404 TFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTTNRLTHLPRQLFQGLGHLEYLL 463
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTP 124
L++N++ +S L L LD+SHN L L + L + L L+ L L +N + +P
Sbjct: 464 LSYNQLTTLSAEVLGPLQRAFWLDISHNHLETLAEGLFSSLGRLRYLSLRNNSLQTFSP 522
Score = 152 (58.6 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 41/113 (36%), Positives = 56/113 (49%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
SL LS++ N + G GL L L+ N + VL D F+ L L L LA N++
Sbjct: 146 SLASLSLSSNLLGRLEEGLFQGLSHLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGNKL 205
Query: 72 VAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTP 124
+ A L L LDLS N LR++ ++ L LQ+L LD N I+ V P
Sbjct: 206 TYLQPALFCGLGELRELDLSRNALRSVKANVFVHLPRLQKLYLDRNLITAVAP 258
Score = 150 (57.9 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 41/119 (34%), Positives = 63/119 (52%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L ++ V++++ N S+ GLDKL SL H+ + + H+F LS L L L N
Sbjct: 360 LFNVAVMNLSGNCLRSLPERVFQGLDKLHSLHLEHSCLGHVRLHTFAGLSGLRRLFLRDN 419
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
I ++ SLA LS L LDL+ N L L + L L L+ L L N ++ ++ +V+G
Sbjct: 420 SISSIEEQSLAGLSELLELDLTTNRLTHLPRQLFQGLGHLEYLLLSYNQLTTLSAEVLG 478
Score = 136 (52.9 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 40/131 (30%), Positives = 59/131 (45%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L+ L + N ++V A G+ L L HN++ L + +F L L L LAHN
Sbjct: 240 LPRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRLAHN 299
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
I ++ + L L L L HN +R L + L L+ L L+DN I+ V
Sbjct: 300 AIASLRPRTFKDLHFLEELQLGHNRIRQLGERTFEGLGQLEVLTLNDNQITEVRVGAFSG 359
Query: 130 NVTITTLTLSG 140
+ + LSG
Sbjct: 360 LFNVAVMNLSG 370
Score = 135 (52.6 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 37/113 (32%), Positives = 55/113 (48%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L VL +AHN +S+R L L L HN+I L + +F L L L L N
Sbjct: 288 LLGLHVLRLAHNAIASLRPRTFKDLHFLEELQLGHNRIRQLGERTFEGLGQLEVLTLNDN 347
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
+I V + + L N+ ++LS N LR+L + + L L L L+ + + V
Sbjct: 348 QITEVRVGAFSGLFNVAVMNLSGNCLRSLPERVFQGLDKLHSLHLEHSCLGHV 400
Score = 128 (50.1 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 33/110 (30%), Positives = 50/110 (45%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L+ L ++ N SV+ L +L L N I + +F + L LDL+HN
Sbjct: 216 LGELRELDLSRNALRSVKANVFVHLPRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHN 275
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
R+ + + L L L L+HN + +L L L+EL+L N I
Sbjct: 276 RVAGLMEDTFPGLLGLHVLRLAHNAIASLRPRTFKDLHFLEELQLGHNRI 325
Score = 126 (49.4 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 41/149 (27%), Positives = 67/149 (44%)
Query: 1 MSIWCTVRRLSSL--------KVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLED 52
+S++C+ + L+ L + L + N SS+ A L L L+ + + LE
Sbjct: 55 LSVFCSSKNLTHLPDDIPVSTRALWLDGNNLSSIPSAAFQNLSSLDFLNLQGSWLRSLEP 114
Query: 53 HSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQEL 112
+ L L HL L NR+ ++ H +L +L LS N L L + L L L +L
Sbjct: 115 QALLGLQNLYHLHLERNRLRNLAVGLFTHTPSLASLSLSSNLLGRLEEGLFQGLSHLWDL 174
Query: 113 RLDDNDISMVTPDVIGDNV-TITTLTLSG 140
L N + +V PD + + + L L+G
Sbjct: 175 NLGWNSL-VVLPDTVFQGLGNLHELVLAG 202
Score = 123 (48.4 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 37/120 (30%), Positives = 55/120 (45%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L +L L +A N+ + ++ GL +L L N + ++ + F L L L L N
Sbjct: 192 LGNLHELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVKANVFVHLPRLQKLYLDRN 251
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
I AV+ + + L LDLSHN + L +D L L LRL N I+ + P D
Sbjct: 252 LITAVAPRAFLGMKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRLAHNAIASLRPRTFKD 311
Score = 120 (47.3 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 35/110 (31%), Positives = 50/110 (45%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L L + H+ VR AGL L L N I +E+ S LS L LDL N
Sbjct: 384 LDKLHSLHLEHSCLGHVRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTTN 443
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
R+ + L +L L LS+N L L+ +++ PL+ L + N +
Sbjct: 444 RLTHLPRQLFQGLGHLEYLLLSYNQLTTLSAEVLGPLQRAFWLDISHNHL 493
Score = 120 (47.3 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 35/115 (30%), Positives = 56/115 (48%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T L L+VL++ NQ + VR GA +GL + ++ N + L + F+ L L L
Sbjct: 332 TFEGLGQLEVLTLNDNQITEVRVGAFSGLFNVAVMNLSGNCLRSLPERVFQGLDKLHSLH 391
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
L H+ + V + A LS L L L N + ++ + + L L EL L N ++
Sbjct: 392 LEHSCLGHVRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTTNRLT 446
Score = 107 (42.7 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 37/117 (31%), Positives = 52/117 (44%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L +L L + N+ ++ G L SLS N + LE+ F+ LS L L+L N
Sbjct: 120 LQNLYHLHLERNRLRNLAVGLFTHTPSLASLSLSSNLLGRLEEGLFQGLSHLWDLNLGWN 179
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDV 126
+V + L NL L L+ N L L L L L+EL L N + V +V
Sbjct: 180 SLVVLPDTVFQGLGNLHELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVKANV 236
Score = 104 (41.7 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 29/108 (26%), Positives = 48/108 (44%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
+ +L+ L ++HN+ + + GL L L HN I L +F+ L L L L HN
Sbjct: 264 MKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRLAHNAIASLRPRTFKDLHFLEELQLGHN 323
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
RI + + L L L L+ N + + + L ++ + L N
Sbjct: 324 RIRQLGERTFEGLGQLEVLTLNDNQITEVRVGAFSGLFNVAVMNLSGN 371
Score = 104 (41.7 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 31/117 (26%), Positives = 54/117 (46%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T + L L+ L + HN+ + GL +L L+ + NQI + +F L ++ ++
Sbjct: 308 TFKDLHFLEELQLGHNRIRQLGERTFEGLGQLEVLTLNDNQITEVRVGAFSGLFNVAVMN 367
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
L+ N + ++ L L +L L H+ L + L L+ L L DN IS +
Sbjct: 368 LSGNCLRSLPERVFQGLDKLHSLHLEHSCLGHVRLHTFAGLSGLRRLFLRDNSISSI 424
>UNIPROTKB|Q1KS52 [details] [associations]
symbol:ALS "Acid-labile subunit" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005634 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 CTD:3483
HOVERGEN:HBG000327 OrthoDB:EOG4FFD1R InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GeneTree:ENSGT00690000101816
HOGENOM:HOG000116109 OMA:FCGLGEL EMBL:CU929968 EMBL:DQ459343
EMBL:DQ459344 RefSeq:NP_001041651.1 UniGene:Ssc.16015 STRING:Q1KS52
Ensembl:ENSSSCT00000008781 GeneID:397322 KEGG:ssc:397322
Uniprot:Q1KS52
Length = 606
Score = 155 (59.6 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 40/112 (35%), Positives = 56/112 (50%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
L L + +N S V G GL L L+ N + VL D +F L+ L L LA N++
Sbjct: 148 LASLGLHNNLLSRVEEGLFQGLTNLWDLNLGWNSLAVLPDTAFHGLANLRELVLAGNKLT 207
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTP 124
+ A L L LDLS N LR++ ++ L LQ+L LD N ++ V P
Sbjct: 208 YLQPALFCGLGELRELDLSRNALRSVKANVFVKLPKLQKLYLDHNLLAAVAP 259
Score = 152 (58.6 bits), Expect = 6.9e-10, P = 6.9e-10
Identities = 41/132 (31%), Positives = 61/132 (46%)
Query: 9 RLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 68
+L L+ L + HN ++V GA G+ L L HN++ L + +F L L L LAH
Sbjct: 240 KLPKLQKLYLDHNLLAAVAPGAFLGMKALRWLDLSHNRVGGLLEDTFPGLLGLHVLRLAH 299
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
N + ++ + L L L L HN LR L + L L+ L L+DN I +
Sbjct: 300 NALASLRPRTFKDLHFLEELQLGHNRLRQLPEKAFEGLGQLEVLALNDNQIQEIKAGAFL 359
Query: 129 DNVTITTLTLSG 140
+ + LSG
Sbjct: 360 GLFNVAVMNLSG 371
Score = 149 (57.5 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 39/123 (31%), Positives = 62/123 (50%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T LS L+ L + N ++ +L GL +L L N++ L F+ L L +L
Sbjct: 405 TFAGLSGLRRLFLKDNGLEAIDEQSLWGLAELLELDLTANRLTHLPGRLFQGLGKLEYLL 464
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
L+ NR+ A+ +L L LD+SHN L+AL + ++ PL L+ L L +N + P
Sbjct: 465 LSRNRLSALPADALGPLQRTFWLDVSHNRLQALPEAVLAPLGQLRYLSLRNNSLRTFVPQ 524
Query: 126 VIG 128
+G
Sbjct: 525 PLG 527
Score = 135 (52.6 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 42/149 (28%), Positives = 70/149 (46%)
Query: 1 MSIWCTVRRLSSL--------KVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLED 52
+S++C+ R L+ L + L + N FSSV GA L L L+ + + LE
Sbjct: 56 LSVFCSSRNLTQLPDGIPDAARALWLDSNNFSSVPAGAFRNLSSLGFLNLQGSGLASLEP 115
Query: 53 HSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQEL 112
+ L L HL L N++ +++ + H L +L L +N L + + L L +L +L
Sbjct: 116 QALLGLQNLYHLHLERNQLRSLAAHTFLHTPGLASLGLHNNLLSRVEEGLFQGLTNLWDL 175
Query: 113 RLDDNDISMVTPDVIGDNVT-ITTLTLSG 140
L N ++ V PD + + L L+G
Sbjct: 176 NLGWNSLA-VLPDTAFHGLANLRELVLAG 203
Score = 132 (51.5 bits), Expect = 9.7e-08, P = 9.7e-08
Identities = 36/120 (30%), Positives = 58/120 (48%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L++L+ L +A N+ + ++ GL +L L N + ++ + F L L L L HN
Sbjct: 193 LANLRELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVKANVFVKLPKLQKLYLDHN 252
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+ AV+ + + L LDLSHN + L +D L L LRL N ++ + P D
Sbjct: 253 LLAAVAPGAFLGMKALRWLDLSHNRVGGLLEDTFPGLLGLHVLRLAHNALASLRPRTFKD 312
Score = 130 (50.8 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 34/108 (31%), Positives = 50/108 (46%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L+ L ++ N SV+ L KL L HN + + +F + L LDL+HN
Sbjct: 217 LGELRELDLSRNALRSVKANVFVKLPKLQKLYLDHNLLAAVAPGAFLGMKALRWLDLSHN 276
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
R+ + + L L L L+HN L +L L L+EL+L N
Sbjct: 277 RVGGLLEDTFPGLLGLHVLRLAHNALASLRPRTFKDLHFLEELQLGHN 324
Score = 130 (50.8 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 35/113 (30%), Positives = 53/113 (46%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L VL +AHN +S+R L L L HN++ L + +F L L L L N
Sbjct: 289 LLGLHVLRLAHNALASLRPRTFKDLHFLEELQLGHNRLRQLPEKAFEGLGQLEVLALNDN 348
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
+I + + L N+ ++LS N LR L + + L L L L+ + + V
Sbjct: 349 QIQEIKAGAFLGLFNVAVMNLSGNCLRNLPEQVFRGLGKLHSLHLEHSCLGRV 401
Score = 124 (48.7 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 38/119 (31%), Positives = 58/119 (48%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L ++ V++++ N ++ GL KL SL H+ + + H+F LS L L L N
Sbjct: 361 LFNVAVMNLSGNCLRNLPEQVFRGLGKLHSLHLEHSCLGRVGLHTFAGLSGLRRLFLKDN 420
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
+ A+ SL L+ L LDL+ N L L L L L+ L L N +S + D +G
Sbjct: 421 GLEAIDEQSLWGLAELLELDLTANRLTHLPGRLFQGLGKLEYLLLSRNRLSALPADALG 479
Score = 123 (48.4 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 38/117 (32%), Positives = 55/117 (47%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
R LSSL L++ + +S+ AL GL L L NQ+ L H+F L+ L L
Sbjct: 95 RNLSSLGFLNLQGSGLASLEPQALLGLQNLYHLHLERNQLRSLAAHTFLHTPGLASLGLH 154
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTP 124
+N + V L+NL L+L N L L L +L+EL L N ++ + P
Sbjct: 155 NNLLSRVEEGLFQGLTNLWDLNLGWNSLAVLPDTAFHGLANLRELVLAGNKLTYLQP 211
Score = 120 (47.3 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 35/111 (31%), Positives = 53/111 (47%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L+VL++ NQ ++ GA GL + ++ N + L + FR L L L L H+
Sbjct: 337 LGQLEVLALNDNQIQEIKAGAFLGLFNVAVMNLSGNCLRNLPEQVFRGLGKLHSLHLEHS 396
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
+ V + A LS L L L N L A+ + + L L EL L N ++
Sbjct: 397 CLGRVGLHTFAGLSGLRRLFLKDNGLEAIDEQSLWGLAELLELDLTANRLT 447
Score = 117 (46.2 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 36/120 (30%), Positives = 53/120 (44%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
R L L L + H+ V AGL L L N ++ +++ S L+ L LDL
Sbjct: 383 RGLGKLHSLHLEHSCLGRVGLHTFAGLSGLRRLFLKDNGLEAIDEQSLWGLAELLELDLT 442
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI 127
NR+ + G L L L LS N L AL D + PL+ L + N + + P+ +
Sbjct: 443 ANRLTHLPGRLFQGLGKLEYLLLSRNRLSALPADALGPLQRTFWLDVSHNRLQAL-PEAV 501
Score = 110 (43.8 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 35/117 (29%), Positives = 53/117 (45%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L +L L + NQ S+ L SL H+N + +E+ F+ L+ L L+L N
Sbjct: 121 LQNLYHLHLERNQLRSLAAHTFLHTPGLASLGLHNNLLSRVEEGLFQGLTNLWDLNLGWN 180
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDV 126
+ + + L+NL L L+ N L L L L L+EL L N + V +V
Sbjct: 181 SLAVLPDTAFHGLANLRELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVKANV 237
Score = 106 (42.4 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 35/130 (26%), Positives = 56/130 (43%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L++L L++ N + + A GL L L N++ L+ F L L LDL+ N
Sbjct: 169 LTNLWDLNLGWNSLAVLPDTAFHGLANLRELVLAGNKLTYLQPALFCGLGELRELDLSRN 228
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+ +V L L L L HN L A+ +K+L+ L L N + + D
Sbjct: 229 ALRSVKANVFVKLPKLQKLYLDHNLLAAVAPGAFLGMKALRWLDLSHNRVGGLLEDTFPG 288
Query: 130 NVTITTLTLS 139
+ + L L+
Sbjct: 289 LLGLHVLRLA 298
Score = 102 (41.0 bits), Expect = 0.00032, P = 0.00032
Identities = 30/117 (25%), Positives = 54/117 (46%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T + L L+ L + HN+ + A GL +L L+ + NQI ++ +F L ++ ++
Sbjct: 309 TFKDLHFLEELQLGHNRLRQLPEKAFEGLGQLEVLALNDNQIQEIKAGAFLGLFNVAVMN 368
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
L+ N + + L L +L L H+ L + L L+ L L DN + +
Sbjct: 369 LSGNCLRNLPEQVFRGLGKLHSLHLEHSCLGRVGLHTFAGLSGLRRLFLKDNGLEAI 425
>ZFIN|ZDB-GENE-080327-15 [details] [associations]
symbol:lrrtm4l1 "leucine rich repeat transmembrane
neuronal 4 like 1" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IDA] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-080327-15 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0042802 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00700000104056 EMBL:BX005125
EMBL:BX293550 IPI:IPI00876741 Ensembl:ENSDART00000113737
Bgee:F1QVN0 Uniprot:F1QVN0
Length = 571
Score = 154 (59.3 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 41/129 (31%), Positives = 67/129 (51%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
SL+ L + +N+ + R A GL +L L HNQ + F L+ L L L NRI
Sbjct: 179 SLEFLDLGYNRLRVLTRTAFLGLSRLMELHLEHNQFSRINFFLFPRLANLRALYLQWNRI 238
Query: 72 VAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNV 131
AV+ L LD+S N ++ L + L +LQ L L+ N ++ V+ +V+ +
Sbjct: 239 RAVNQGLPWSWYTLQRLDISGNEIQVLDPVVFQCLPNLQVLNLESNKLANVSQEVVAAWI 298
Query: 132 TITTLTLSG 140
++TT++L+G
Sbjct: 299 SLTTISLAG 307
Score = 136 (52.9 bits), Expect = 5.4e-10, Sum P(2) = 5.4e-10
Identities = 38/116 (32%), Positives = 55/116 (47%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
VRRL L +LS N+ S + G+ L SL +N++ L+ F L L +L L
Sbjct: 105 VRRLKEL-ILS--SNRISQLHNVTFHGVPNLRSLDLSYNKLQELQPGQFYGLRKLQNLHL 161
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
N + A+ + +L LDL +N LR LT+ L L EL L+ N S +
Sbjct: 162 RSNGLTAIPVRAFLECRSLEFLDLGYNRLRVLTRTAFLGLSRLMELHLEHNQFSRI 217
Score = 129 (50.5 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 34/111 (30%), Positives = 57/111 (51%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
S + LS+ +N ++ A L++L L HNQI ++ +F+ + L L L+ NRI
Sbjct: 59 SCQGLSLRYNDLHTMLPYQFAHLNQLLWLYLDHNQIMFVDSRAFQGVRRLKELILSSNRI 118
Query: 72 VAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
+ + + NL +LDLS+N L+ L L+ LQ L L N ++ +
Sbjct: 119 SQLHNVTFHGVPNLRSLDLSYNKLQELQPGQFYGLRKLQNLHLRSNGLTAI 169
Score = 129 (50.5 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 37/135 (27%), Positives = 62/135 (45%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T + +L+ L +++N+ ++ G GL KL +L N + + +F +L LD
Sbjct: 125 TFHGVPNLRSLDLSYNKLQELQPGQFYGLRKLQNLHLRSNGLTAIPVRAFLECRSLEFLD 184
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
L +NR+ ++ + LS L L L HN + L L +L+ L L N I V
Sbjct: 185 LGYNRLRVLTRTAFLGLSRLMELHLEHNQFSRINFFLFPRLANLRALYLQWNRIRAVNQG 244
Query: 126 VIGDNVTITTLTLSG 140
+ T+ L +SG
Sbjct: 245 LPWSWYTLQRLDISG 259
Score = 115 (45.5 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 35/117 (29%), Positives = 55/117 (47%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L+ L + N +++ A L L +N++ VL +F LS L L L HN
Sbjct: 153 LRKLQNLHLRSNGLTAIPVRAFLECRSLEFLDLGYNRLRVLTRTAFLGLSRLMELHLEHN 212
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDV 126
+ ++ L+NL L L N +RA+ Q L +LQ L + N+I ++ P V
Sbjct: 213 QFSRINFFLFPRLANLRALYLQWNRIRAVNQGLPWSWYTLQRLDISGNEIQVLDPVV 269
Score = 109 (43.4 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 33/114 (28%), Positives = 52/114 (45%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L+ L L + HNQ V A G+ +L L N+I L + +F + L LDL++N
Sbjct: 81 LNQLLWLYLDHNQIMFVDSRAFQGVRRLKELILSSNRISQLHNVTFHGVPNLRSLDLSYN 140
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVT 123
++ + L L L L N L A+ +SL+ L L N + ++T
Sbjct: 141 KLQELQPGQFYGLRKLQNLHLRSNGLTAIPVRAFLECRSLEFLDLGYNRLRVLT 194
Score = 100 (40.3 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 32/108 (29%), Positives = 48/108 (44%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
LS L L + HNQFS + L L +L N+I + + TL LD++ N
Sbjct: 201 LSRLMELHLEHNQFSRINFFLFPRLANLRALYLQWNRIRAVNQGLPWSWYTLQRLDISGN 260
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
I + L NL L+L N L ++Q+++ SL + L N
Sbjct: 261 EIQVLDPVVFQCLPNLQVLNLESNKLANVSQEVVAAWISLTTISLAGN 308
Score = 39 (18.8 bits), Expect = 5.4e-10, Sum P(2) = 5.4e-10
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 118 DISMVTPDVIGDNVTITTLTLSG 140
D S+VTP DNV+ + + G
Sbjct: 439 DSSLVTPVPEQDNVSFHKVVMGG 461
Score = 35 (17.4 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 109 LQELRLDDNDISMVTPD---VIGDNVTITTLTLSG 140
LQE + N + TP+ V+G+ T T+SG
Sbjct: 513 LQEYYMSYNPAA--TPEALEVLGNGTGTCTCTISG 545
>UNIPROTKB|H3BNZ6 [details] [associations]
symbol:ISLR2 "Immunoglobulin superfamily-containing
leucine-rich repeat protein 2" species:9606 "Homo sapiens"
[GO:0009986 "cell surface" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0009986 GO:GO:0045773 InterPro:IPR000372
SMART:SM00013 HGNC:HGNC:29286 EMBL:AC010931 Ensembl:ENST00000561740
Bgee:H3BNZ6 Uniprot:H3BNZ6
Length = 138
Score = 144 (55.7 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 32/88 (36%), Positives = 55/88 (62%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
+++ LS++ N+ + +RRGA A + ++TSL HN++ +E + LS L +LDL+HN
Sbjct: 51 ANVTTLSLSANKITVLRRGAFADVTQVTSLWLAHNEVRTVEPGALAVLSQLKNLDLSHNF 110
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRAL 98
I + + L +LS L L ++HN L +L
Sbjct: 111 ISSFPWSDLRNLSALQLLKMNHNRLGSL 138
Score = 131 (51.2 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 35/99 (35%), Positives = 54/99 (54%)
Query: 19 AHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGAS 78
A+ + V G A + T+LS N+I VL +F ++ ++ L LAHN + V +
Sbjct: 38 AYKELREVPEGLPANV---TTLSLSANKITVLRRGAFADVTQVTSLWLAHNEVRTVEPGA 94
Query: 79 LAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
LA LS L LDLSHNF+ + + L +LQ L+++ N
Sbjct: 95 LAVLSQLKNLDLSHNFISSFPWSDLRNLSALQLLKMNHN 133
>UNIPROTKB|F1NRN7 [details] [associations]
symbol:SHOC2 "Leucine-rich repeat protein SHOC-2"
species:9031 "Gallus gallus" [GO:0000164 "protein phosphatase type
1 complex" evidence=IEA] [GO:0046579 "positive regulation of Ras
protein signal transduction" evidence=IEA] InterPro:IPR001611
InterPro:IPR027036 PROSITE:PS51450 InterPro:IPR003591 SMART:SM00369
InterPro:IPR025875 Pfam:PF12799 GeneTree:ENSGT00600000084236
PANTHER:PTHR23155:SF38 IPI:IPI00600917 EMBL:AADN02030891
Ensembl:ENSGALT00000014266 Uniprot:F1NRN7
Length = 529
Score = 153 (58.9 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 40/133 (30%), Positives = 75/133 (56%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
++ LS L +LSI N+ + + L L +L HNQ++ L + + + +++LDL
Sbjct: 211 IKNLSKLTMLSIRENKIKQLP-AEIGELCNLITLDVAHNQLEHLPEE-IGSCTQITNLDL 268
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDV 126
HN ++ + ++ +LS+L+ L L +N L A+ + L L EL L++N+IS + +
Sbjct: 269 QHNELLDLP-ETIGNLSSLSRLGLRYNRLSAIPKSL-AKCSELDELNLENNNISTLPEGL 326
Query: 127 IGDNVTITTLTLS 139
+ V +T+LTL+
Sbjct: 327 LSSLVKLTSLTLA 339
Score = 126 (49.4 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 36/111 (32%), Positives = 58/111 (52%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
+ L +L L +AHNQ + + ++T+L HN++ L + + LS+LS L L
Sbjct: 234 IGELCNLITLDVAHNQLEHLPE-EIGSCTQITNLDLQHNELLDLPE-TIGNLSSLSRLGL 291
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
+NR+ A+ SLA S L L+L +N + L + L++ L L L L N
Sbjct: 292 RYNRLSAIP-KSLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLARN 341
Score = 125 (49.1 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 40/134 (29%), Positives = 65/134 (48%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
++ + S L L++ +N S++ G L+ L KLTSL+ N ST+ L+
Sbjct: 302 SLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSLN 361
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
+ HNRI + + L+ L++ N L +L D T S+ EL L N ++ + D
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGT-WTSMVELNLATNQLTKIPED 420
Query: 126 VIGDNVTITTLTLS 139
V G V++ L LS
Sbjct: 421 VSG-LVSLEVLILS 433
Score = 122 (48.0 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 37/129 (28%), Positives = 65/129 (50%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L++L + HN+ + + L L +L N+I +E + LS L+ L + N
Sbjct: 168 LKKLRMLDLRHNKLREIP-SVVYRLTSLATLYLRFNRITTVEK-DIKNLSKLTMLSIREN 225
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+I + A + L NL TLD++HN L L ++ I + L L N++ + P+ IG+
Sbjct: 226 KIKQLP-AEIGELCNLITLDVAHNQLEHLPEE-IGSCTQITNLDLQHNEL-LDLPETIGN 282
Query: 130 NVTITTLTL 138
+++ L L
Sbjct: 283 LSSLSRLGL 291
Score = 122 (48.0 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 34/134 (25%), Positives = 66/134 (49%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T+ LSSL L + +N+ S++ + +LA +L L+ +N I L + +L L+ L
Sbjct: 279 TIGNLSSLSRLGLRYNRLSAIPK-SLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLT 337
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
LA N + + S + +L++ HN + + + + K L +L + DN ++ + D
Sbjct: 338 LARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD 397
Query: 126 VIGDNVTITTLTLS 139
G ++ L L+
Sbjct: 398 -FGTWTSMVELNLA 410
>WB|WBGene00006366 [details] [associations]
symbol:sym-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0005615 "extracellular space" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0009792 GO:GO:0005615
InterPro:IPR003591 SMART:SM00369 GeneTree:ENSGT00690000101816
EMBL:Z79598 EMBL:AJ242473 PIR:T19939 RefSeq:NP_510426.1
UniGene:Cel.8136 ProteinModelPortal:G5EFP4 SMR:G5EFP4
EnsemblMetazoa:C44H4.3 GeneID:181555 KEGG:cel:CELE_C44H4.3
CTD:181555 WormBase:C44H4.3 OMA:NMERFWR NextBio:914424
Uniprot:G5EFP4
Length = 680
Score = 154 (59.3 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 36/118 (30%), Positives = 60/118 (50%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
VR +++L L I +N+ +++R+ L L+ LS + N I ++ + + L +L L
Sbjct: 201 VRNMNNLIALHIKYNKINAIRQNDFVNLTSLSMLSLNGNNISEIKGGALQNTPNLHYLYL 260
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTP 124
N + + L L LDLS N +T+++ L+S+Q L LD N IS V P
Sbjct: 261 NENNLQTLDNGVLEQFKQLQVLDLSFNNFTDITKEMFEGLESIQHLNLDSNRISAVAP 318
Score = 127 (49.8 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 36/127 (28%), Positives = 64/127 (50%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
SL+ L + +N + A+ ++ L +L +N+I+ + + F L++LS L L N I
Sbjct: 182 SLQNLILDNNCMTEFPSKAVRNMNNLIALHIKYNKINAIRQNDFVNLTSLSMLSLNGNNI 241
Query: 72 VAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNV 131
+ G +L + NL L L+ N L+ L ++ K LQ L L N+ + +T ++
Sbjct: 242 SEIKGGALQNTPNLHYLYLNENNLQTLDNGVLEQFKQLQVLDLSFNNFTDITKEMFEGLE 301
Query: 132 TITTLTL 138
+I L L
Sbjct: 302 SIQHLNL 308
Score = 112 (44.5 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 34/113 (30%), Positives = 59/113 (52%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L S++ L++ N+ S+V GA AG L L +N + + + + L + L++N
Sbjct: 300 LESIQHLNLDSNRISAVAPGAFAGTPLLL-LWLPNNCLTEVSQQTLKGAPFLRMVSLSNN 358
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
I V S HL NL TLDL++N + +L ++ ++L +RL +N + V
Sbjct: 359 NIREVHELSFDHLPNLHTLDLANNKIMSLQNKSLSGPENLA-VRLQENPVVCV 410
Score = 108 (43.1 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 31/129 (24%), Positives = 67/129 (51%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
++ LS++ N V ALAGL L LS N+I+ + +F +++L ++L N+I
Sbjct: 110 MQELSLSENNLKEVPTSALAGLRVLNILSLKCNKIENITTKAFVNMTSLIDVNLGCNQIC 169
Query: 73 AVSGASLAHLS-NLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNV 131
+++ + A++ +L L L +N + + + +L L + N I+ + + +
Sbjct: 170 SMAADTFANVKMSLQNLILDNNCMTEFPSKAVRNMNNLIALHIKYNKINAIRQNDFVNLT 229
Query: 132 TITTLTLSG 140
+++ L+L+G
Sbjct: 230 SLSMLSLNG 238
Score = 102 (41.0 bits), Expect = 0.00037, P = 0.00037
Identities = 29/114 (25%), Positives = 57/114 (50%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALS-TLSHLDLAH 68
L L +LS+ N+ ++ A + L ++ NQI + +F + +L +L L +
Sbjct: 131 LRVLNILSLKCNKIENITTKAFVNMTSLIDVNLGCNQICSMAADTFANVKMSLQNLILDN 190
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
N + ++ +++NL L + +N + A+ Q+ L SL L L+ N+IS +
Sbjct: 191 NCMTEFPSKAVRNMNNLIALHIKYNKINAIRQNDFVNLTSLSMLSLNGNNISEI 244
>UNIPROTKB|E1BU15 [details] [associations]
symbol:SHOC2 "Leucine-rich repeat protein SHOC-2"
species:9031 "Gallus gallus" [GO:0000164 "protein phosphatase type
1 complex" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0019903 "protein phosphatase binding" evidence=IEA] [GO:0046579
"positive regulation of Ras protein signal transduction"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027036
PROSITE:PS51450 GO:GO:0005634 InterPro:IPR003591 SMART:SM00369
InterPro:IPR025875 Pfam:PF12799 GO:GO:0046579 GO:GO:0000164
GeneTree:ENSGT00600000084236 OMA:LPHGIGN PANTHER:PTHR23155:SF38
EMBL:AADN02030891 IPI:IPI00571083 Ensembl:ENSGALT00000014267
Uniprot:E1BU15
Length = 582
Score = 153 (58.9 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 40/133 (30%), Positives = 75/133 (56%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
++ LS L +LSI N+ + + L L +L HNQ++ L + + + +++LDL
Sbjct: 211 IKNLSKLTMLSIRENKIKQLP-AEIGELCNLITLDVAHNQLEHLPEE-IGSCTQITNLDL 268
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDV 126
HN ++ + ++ +LS+L+ L L +N L A+ + L L EL L++N+IS + +
Sbjct: 269 QHNELLDLP-ETIGNLSSLSRLGLRYNRLSAIPKSL-AKCSELDELNLENNNISTLPEGL 326
Query: 127 IGDNVTITTLTLS 139
+ V +T+LTL+
Sbjct: 327 LSSLVKLTSLTLA 339
Score = 128 (50.1 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 37/111 (33%), Positives = 60/111 (54%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
V L SL+VL +++N + G + L KL L N+++ L + L L L L
Sbjct: 421 VSGLVSLEVLILSNNLLKKLPHG-IGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVL 478
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
+N++ + + HL+NLT L L N L L +++ T L++L+EL L+DN
Sbjct: 479 TNNQLTTLP-RGIGHLTNLTHLGLGENLLTHLPEEIGT-LENLEELYLNDN 527
Score = 126 (49.4 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 36/111 (32%), Positives = 58/111 (52%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
+ L +L L +AHNQ + + ++T+L HN++ L + + LS+LS L L
Sbjct: 234 IGELCNLITLDVAHNQLEHLPE-EIGSCTQITNLDLQHNELLDLPE-TIGNLSSLSRLGL 291
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
+NR+ A+ SLA S L L+L +N + L + L++ L L L L N
Sbjct: 292 RYNRLSAIP-KSLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLARN 341
Score = 125 (49.1 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 40/134 (29%), Positives = 65/134 (48%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
++ + S L L++ +N S++ G L+ L KLTSL+ N ST+ L+
Sbjct: 302 SLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSLN 361
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
+ HNRI + + L+ L++ N L +L D T S+ EL L N ++ + D
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGT-WTSMVELNLATNQLTKIPED 420
Query: 126 VIGDNVTITTLTLS 139
V G V++ L LS
Sbjct: 421 VSG-LVSLEVLILS 433
Score = 122 (48.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 37/129 (28%), Positives = 65/129 (50%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L++L + HN+ + + L L +L N+I +E + LS L+ L + N
Sbjct: 168 LKKLRMLDLRHNKLREIP-SVVYRLTSLATLYLRFNRITTVEK-DIKNLSKLTMLSIREN 225
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+I + A + L NL TLD++HN L L ++ I + L L N++ + P+ IG+
Sbjct: 226 KIKQLP-AEIGELCNLITLDVAHNQLEHLPEE-IGSCTQITNLDLQHNEL-LDLPETIGN 282
Query: 130 NVTITTLTL 138
+++ L L
Sbjct: 283 LSSLSRLGL 291
Score = 122 (48.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 34/134 (25%), Positives = 66/134 (49%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T+ LSSL L + +N+ S++ + +LA +L L+ +N I L + +L L+ L
Sbjct: 279 TIGNLSSLSRLGLRYNRLSAIPK-SLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLT 337
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
LA N + + S + +L++ HN + + + + K L +L + DN ++ + D
Sbjct: 338 LARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD 397
Query: 126 VIGDNVTITTLTLS 139
G ++ L L+
Sbjct: 398 -FGTWTSMVELNLA 410
>DICTYBASE|DDB_G0278509 [details] [associations]
symbol:DDB_G0278509 "MLK family protein kinase
DDB_G0278509" species:44689 "Dictyostelium discoideum" [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0006468 "protein phosphorylation" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000719 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 PROSITE:PS51450 dictyBase:DDB_G0278509
GO:GO:0005524 EMBL:AAFI02000023 SUPFAM:SSF56112 GO:GO:0004674
eggNOG:COG4886 InterPro:IPR025875 Pfam:PF12799 HSSP:P25147
ProtClustDB:CLSZ2846780 RefSeq:XP_642407.1
ProteinModelPortal:Q54XZ5 EnsemblProtists:DDB0220138 GeneID:8621612
KEGG:ddi:DDB_G0278509 OMA:LEIPENC Uniprot:Q54XZ5
Length = 1248
Score = 157 (60.3 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 44/131 (33%), Positives = 77/131 (58%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
+++ +LK L+++HN+ + +L L KL SLS +NQI VL D +LS L+ L ++
Sbjct: 568 QKMKNLKQLNLSHNELQEIP-SSLRHLSKLHSLSIDYNQISVLPDKVVASLSRLAKLTIS 626
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI 127
+N+I + A + +LS+L L+ S+N + L D I L +L++L L++N++ + P I
Sbjct: 627 NNKIKQLPFA-INNLSSLIELNASNNVIELLP-DSICYLSNLKKLNLNNNNLKEL-PSNI 683
Query: 128 GDNVTITTLTL 138
G + L L
Sbjct: 684 GFLTKLVDLQL 694
Score = 135 (52.6 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 41/115 (35%), Positives = 66/115 (57%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
++R LS L LSI +NQ S + +A L +L L+ +N+I L + LS+L L+
Sbjct: 589 SLRHLSKLHSLSIDYNQISVLPDKVVASLSRLAKLTISNNKIKQLP-FAINNLSSLIELN 647
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
A N ++ + S+ +LSNL L+L++N L+ L + I L L +L+L +N IS
Sbjct: 648 -ASNNVIELLPDSICYLSNLKKLNLNNNNLKELPSN-IGFLTKLVDLQLYNNQIS 700
Score = 111 (44.1 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 35/126 (27%), Positives = 61/126 (48%)
Query: 14 KVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVA 73
K++ ++ N S+ A + L L +N + + S L L+ LDL+HN +
Sbjct: 413 KIIDLSFNNIKSIPLDAFTNISNLEQLIMFNNNLSDVPS-SIEFLKHLTILDLSHNNLHE 471
Query: 74 VSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTI 133
+ L +LS L L LS+N L+ L +L++L LD+N I+ + + + + +
Sbjct: 472 IC-RELGNLSFLRELYLSNNSLKKFPTT--GNLYNLKKLILDNNQITTIPIECVEPLIQL 528
Query: 134 TTLTLS 139
TL LS
Sbjct: 529 QTLDLS 534
Score = 104 (41.7 bits), Expect = 0.00023, P = 0.00023
Identities = 35/134 (26%), Positives = 62/134 (46%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T L +LK L + +NQ +++ + L +L +L N+I + + +T + +
Sbjct: 497 TTGNLYNLKKLILDNNQITTIPIECVEPLIQLQTLDLSFNKIGTITSSTTTTTTTTTTNN 556
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
+N G+ + NL L+LSHN L+ + L L L L +D N IS++
Sbjct: 557 NNNN---GGGGSIYQKMKNLKQLNLSHNELQEIPSSL-RHLSKLHSLSIDYNQISVLPDK 612
Query: 126 VIGDNVTITTLTLS 139
V+ + LT+S
Sbjct: 613 VVASLSRLAKLTIS 626
>FB|FBgn0034083 [details] [associations]
symbol:lbk "lambik" species:7227 "Drosophila melanogaster"
[GO:0048477 "oogenesis" evidence=IMP] [GO:0008407 "chaeta
morphogenesis" evidence=IMP] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 EMBL:AE013599 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101816 RefSeq:NP_611091.2
ProteinModelPortal:A1ZAB1 SMR:A1ZAB1 STRING:A1ZAB1 PaxDb:A1ZAB1
EnsemblMetazoa:FBtr0302084 GeneID:36788 KEGG:dme:Dmel_CG8434
UCSC:CG8434-RA CTD:36788 FlyBase:FBgn0034083 eggNOG:NOG329771
InParanoid:A1ZAB1 OMA:LEINWST OrthoDB:EOG4T4B98 GenomeRNAi:36788
NextBio:800384 Bgee:A1ZAB1 Uniprot:A1ZAB1
Length = 1252
Score = 157 (60.3 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 41/112 (36%), Positives = 63/112 (56%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
LS LK L +A+N +S+ +LA L L +L N++ +E +SF + L HL L+ N
Sbjct: 336 LSGLKHLVLANNHITSISSESLAALPLLRTLDLSRNKLHTIELNSFPKSNNLVHLILSFN 395
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISM 121
I V+ S A L+NLT L+LS+N L L + L L++L L+ N + +
Sbjct: 396 EITNVNEHSFATLNNLTDLELSNNRLSTLPIRVFKNLNQLKKLALNFNQLEI 447
Score = 145 (56.1 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 38/116 (32%), Positives = 61/116 (52%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
+ ++ + +A NQ SS+ R L L KL L+ N I +E ++ +L LDL++N
Sbjct: 479 MHKIETIDLAMNQISSLSRQGLFNLTKLRHLNLSFNAISRIEVDTWEFTQSLEVLDLSNN 538
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
I L L L TL+L+HN L+ L ++ +K+L+EL L N +S + D
Sbjct: 539 AINEFKPQHLDCLHRLKTLNLAHNRLQYLQENTFDCVKNLEELNLRRNRLSWIIED 594
Score = 139 (54.0 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 43/129 (33%), Positives = 63/129 (48%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
S ++ L +A+N+ + + L LT +S N ++V+ F LS L HL LA+N
Sbjct: 291 SYVQTLHLANNKLNDTTVLEIRNLLNLTKVSLKRNLLEVIP--KFIGLSGLKHLVLANNH 348
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDN 130
I ++S SLA L L TLDLS N L + + +L L L N+I+ V
Sbjct: 349 ITSISSESLAALPLLRTLDLSRNKLHTIELNSFPKSNNLVHLILSFNEITNVNEHSFATL 408
Query: 131 VTITTLTLS 139
+T L LS
Sbjct: 409 NNLTDLELS 417
Score = 132 (51.5 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 38/132 (28%), Positives = 66/132 (50%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
+ L+ LK L++ NQ + GL+ + +L N+I L+D F + + +DLA
Sbjct: 430 KNLNQLKKLALNFNQLE-INWSTFRGLESMKNLQLKSNKIRALQDGVFYVMHKIETIDLA 488
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI 127
N+I ++S L +L+ L L+LS N + + D +SL+ L L +N I+ P +
Sbjct: 489 MNQISSLSRQGLFNLTKLRHLNLSFNAISRIEVDTWEFTQSLEVLDLSNNAINEFKPQHL 548
Query: 128 GDNVTITTLTLS 139
+ TL L+
Sbjct: 549 DCLHRLKTLNLA 560
Score = 118 (46.6 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 32/114 (28%), Positives = 52/114 (45%)
Query: 4 WCTVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 63
W T R L S+K L + N+ +++ G + K+ ++ NQI L L+ L H
Sbjct: 449 WSTFRGLESMKNLQLKSNKIRALQDGVFYVMHKIETIDLAMNQISSLSRQGLFNLTKLRH 508
Query: 64 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
L+L+ N I + + +L LDLS+N + + L L+ L L N
Sbjct: 509 LNLSFNAISRIEVDTWEFTQSLEVLDLSNNAINEFKPQHLDCLHRLKTLNLAHN 562
Score = 118 (46.6 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 31/116 (26%), Positives = 61/116 (52%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
SL+VL +++N + + L L +L +L+ HN++ L++++F + L L+L NR+
Sbjct: 529 SLEVLDLSNNAINEFKPQHLDCLHRLKTLNLAHNRLQYLQENTFDCVKNLEELNLRRNRL 588
Query: 72 VAV-----SGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
+ + A L L LDL N L+ ++ ++ L +L+ L L N ++ +
Sbjct: 589 SWIIEDQSAAAPFKGLRKLRRLDLHGNNLKQISTKAMSGLNNLEILNLGSNALASI 644
Score = 111 (44.1 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 30/108 (27%), Positives = 54/108 (50%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID-VLEDHS----FRALSTLSHL 64
L LK L++AHN+ ++ + L L+ N++ ++ED S F+ L L L
Sbjct: 551 LHRLKTLNLAHNRLQYLQENTFDCVKNLEELNLRRNRLSWIIEDQSAAAPFKGLRKLRRL 610
Query: 65 DLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQEL 112
DL N + +S +++ L+NL L+L N L ++ + + L +L
Sbjct: 611 DLHGNNLKQISTKAMSGLNNLEILNLGSNALASIQVNAFEHMLRLNKL 658
Score = 106 (42.4 bits), Expect = 0.00014, P = 0.00014
Identities = 32/114 (28%), Positives = 52/114 (45%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
+R L +L +S+ N + + GL L L +N I + S AL L LDL
Sbjct: 311 IRNLLNLTKVSLKRNLLEVIPK--FIGLSGLKHLVLANNHITSISSESLAALPLLRTLDL 368
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
+ N++ + S +NL L LS N + + + L +L +L L +N +S
Sbjct: 369 SRNKLHTIELNSFPKSNNLVHLILSFNEITNVNEHSFATLNNLTDLELSNNRLS 422
>UNIPROTKB|Q5F4C4 [details] [associations]
symbol:SHOC2 "Leucine-rich repeat protein SHOC-2"
species:9031 "Gallus gallus" [GO:0046579 "positive regulation of
Ras protein signal transduction" evidence=ISS] [GO:0019903 "protein
phosphatase binding" evidence=ISS] [GO:0000164 "protein phosphatase
type 1 complex" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] InterPro:IPR001611
InterPro:IPR027036 PROSITE:PS51450 GO:GO:0005634 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
GO:GO:0046579 GO:GO:0019903 GO:GO:0000164 HSSP:P07359
HOGENOM:HOG000116557 CTD:8036 PANTHER:PTHR23155:SF38 EMBL:AJ851376
IPI:IPI00600917 RefSeq:NP_001026407.1 UniGene:Gga.42449
ProteinModelPortal:Q5F4C4 GeneID:423894 KEGG:gga:423894
NextBio:20826295 Uniprot:Q5F4C4
Length = 529
Score = 152 (58.6 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 40/133 (30%), Positives = 75/133 (56%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
++ LS L +LSI N+ + + L L +L HNQ++ L + + + +++LDL
Sbjct: 211 IKTLSKLTMLSIRENKIKQLP-AEIGELCNLITLDVAHNQLEHLPEE-IGSCTQITNLDL 268
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDV 126
HN ++ + ++ +LS+L+ L L +N L A+ + L L EL L++N+IS + +
Sbjct: 269 QHNELLDLP-ETIGNLSSLSRLGLRYNRLSAIPKSL-AKCSELDELNLENNNISTLPEGL 326
Query: 127 IGDNVTITTLTLS 139
+ V +T+LTL+
Sbjct: 327 LSSLVKLTSLTLA 339
Score = 126 (49.4 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 36/111 (32%), Positives = 58/111 (52%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
+ L +L L +AHNQ + + ++T+L HN++ L + + LS+LS L L
Sbjct: 234 IGELCNLITLDVAHNQLEHLPE-EIGSCTQITNLDLQHNELLDLPE-TIGNLSSLSRLGL 291
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
+NR+ A+ SLA S L L+L +N + L + L++ L L L L N
Sbjct: 292 RYNRLSAIP-KSLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLARN 341
Score = 125 (49.1 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 40/134 (29%), Positives = 65/134 (48%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
++ + S L L++ +N S++ G L+ L KLTSL+ N ST+ L+
Sbjct: 302 SLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSLN 361
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
+ HNRI + + L+ L++ N L +L D T S+ EL L N ++ + D
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGT-WTSMVELNLATNQLTKIPED 420
Query: 126 VIGDNVTITTLTLS 139
V G V++ L LS
Sbjct: 421 VSG-LVSLEVLILS 433
Score = 124 (48.7 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 37/129 (28%), Positives = 65/129 (50%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L++L + HN+ + + L L +L N+I +E + LS L+ L + N
Sbjct: 168 LKKLRMLDLRHNKLREIP-SVVYRLTSLATLYLRFNRITTVEK-DIKTLSKLTMLSIREN 225
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+I + A + L NL TLD++HN L L ++ I + L L N++ + P+ IG+
Sbjct: 226 KIKQLP-AEIGELCNLITLDVAHNQLEHLPEE-IGSCTQITNLDLQHNEL-LDLPETIGN 282
Query: 130 NVTITTLTL 138
+++ L L
Sbjct: 283 LSSLSRLGL 291
Score = 122 (48.0 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 34/134 (25%), Positives = 66/134 (49%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T+ LSSL L + +N+ S++ + +LA +L L+ +N I L + +L L+ L
Sbjct: 279 TIGNLSSLSRLGLRYNRLSAIPK-SLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLT 337
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
LA N + + S + +L++ HN + + + + K L +L + DN ++ + D
Sbjct: 338 LARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD 397
Query: 126 VIGDNVTITTLTLS 139
G ++ L L+
Sbjct: 398 -FGTWTSMVELNLA 410
>UNIPROTKB|Q5TJ59 [details] [associations]
symbol:TLR3 "Toll-like receptor 3" species:9913 "Bos
taurus" [GO:0010008 "endosome membrane" evidence=IEA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0045087 "innate
immune response" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0006954 "inflammatory response" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA] [GO:0050729
"positive regulation of inflammatory response" evidence=IEA]
[GO:0043330 "response to exogenous dsRNA" evidence=IEA] [GO:0034138
"toll-like receptor 3 signaling pathway" evidence=IEA] [GO:0032722
"positive regulation of chemokine production" evidence=IEA]
[GO:0004888 "transmembrane signaling receptor activity"
evidence=IEA] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0002756 "MyD88-independent toll-like receptor
signaling pathway" evidence=IEA] InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 GO:GO:0016021 GO:GO:0007165
GO:GO:0005789 GO:GO:0006954 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0045087
GO:GO:0003723 GO:GO:0010008 InterPro:IPR000372 SMART:SM00013
SUPFAM:SSF52200 EMBL:AJ812026 IPI:IPI00713414 RefSeq:NP_001008664.1
UniGene:Bt.12298 HSSP:O15455 ProteinModelPortal:Q5TJ59
STRING:Q5TJ59 PRIDE:Q5TJ59 GeneID:281535 KEGG:bta:281535 CTD:7098
HOVERGEN:HBG023181 InParanoid:Q5TJ59 KO:K05401 OrthoDB:EOG4N30N8
NextBio:20805490 PANTHER:PTHR24365:SF5 Uniprot:Q5TJ59
Length = 904
Score = 155 (59.6 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 47/134 (35%), Positives = 62/134 (46%)
Query: 9 RLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 68
R S L L N S + L L L+ HN+I L D +F L+ L L
Sbjct: 74 RYSQLTTLDGGFNSISKLEPELCQSLPWLEILNLQHNEISQLSDKTFIFCMNLTELHLMS 133
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTP---D 125
N I + +L NL LDLSHN L + L++LQEL L +N IS +TP D
Sbjct: 134 NSIQKIKNDPFKNLKNLIKLDLSHNGLSSTKLGTQLQLENLQELLLSNNKISSLTPGEFD 193
Query: 126 VIGDNVTITTLTLS 139
+G N ++ L LS
Sbjct: 194 FLG-NSSLKRLELS 206
Score = 133 (51.9 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 45/140 (32%), Positives = 69/140 (49%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDK--LTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 68
+S++ LS++ NQ ++ GL + LT+L N + V+ + SF L L +L L +
Sbjct: 249 TSIENLSLSSNQLDTISHTTFDGLKQTNLTTLDLSRNSLRVMGNDSFAWLPHLEYLSLEY 308
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLR---ALTQ-----DLITP-LKSLQELRLDDNDI 119
N I +S S LSNL LDL +F R +LT D LK L+ L +DDN+
Sbjct: 309 NNIEHLSSRSFYGLSNLRRLDLRRSFTRQSISLTSLPKIDDFSFQWLKCLEYLNMDDNNF 368
Query: 120 SMVTPDVIGDNVTITTLTLS 139
+ + V + L+LS
Sbjct: 369 PGIKRNTFTGLVRLKFLSLS 388
Score = 125 (49.1 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 34/110 (30%), Positives = 53/110 (48%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
+++ VL++ HNQ + +LT+L N I LE ++L L L+L HN
Sbjct: 52 TNITVLNLTHNQLRRLPPANFTRYSQLTTLDGGFNSISKLEPELCQSLPWLEILNLQHNE 111
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
I +S + NLT L L N ++ + D LK+L +L L N +S
Sbjct: 112 ISQLSDKTFIFCMNLTELHLMSNSIQKIKNDPFKNLKNLIKLDLSHNGLS 161
Score = 115 (45.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 41/139 (29%), Positives = 64/139 (46%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRAL--STLSHLD 65
+ L +L L ++HN SS + G L+ L L +N+I L F L S+L L+
Sbjct: 145 KNLKNLIKLDLSHNGLSSTKLGTQLQLENLQELLLSNNKISSLTPGEFDFLGNSSLKRLE 204
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLR-ALTQDLITPLK--SLQELRLDDNDISMV 122
L+ N+I S L L+ L L++ L +LT+ L L S++ L L N + +
Sbjct: 205 LSSNQIKEFSPGCFHTLGELSGLSLNNAKLSPSLTEKLCLELSNTSIENLSLSSNQLDTI 264
Query: 123 TPDVIGD--NVTITTLTLS 139
+ +TTL LS
Sbjct: 265 SHTTFDGLKQTNLTTLDLS 283
Score = 112 (44.5 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 38/129 (29%), Positives = 58/129 (44%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHS-----FRALSTLS 62
R L +L +L +++N +++ L GL+KL L HN + L H+ + L L
Sbjct: 504 RPLPNLVILDLSNNNIANINDELLKGLEKLEILDLQHNNLARLWKHANPGGPVQFLKGLF 563
Query: 63 HL---DLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
HL +L N + + L L ++DL N L L Q + SL+ L L N I
Sbjct: 564 HLHILNLGSNGFDEIPVEAFKDLRELKSIDLGMNNLNILPQSVFDNQVSLKSLSLQKNLI 623
Query: 120 SMVTPDVIG 128
+ V V G
Sbjct: 624 TSVQKTVFG 632
>FB|FBgn0029114 [details] [associations]
symbol:Tollo "Tollo" species:7227 "Drosophila melanogaster"
[GO:0005886 "plasma membrane" evidence=ISS] [GO:0004888
"transmembrane signaling receptor activity" evidence=IEA;ISS]
[GO:0007165 "signal transduction" evidence=ISS] [GO:0006952
"defense response" evidence=NAS] [GO:0016021 "integral to membrane"
evidence=ISS] [GO:0007352 "zygotic specification of dorsal/ventral
axis" evidence=IEA] [GO:0006963 "positive regulation of
antibacterial peptide biosynthetic process" evidence=IEA]
[GO:0050830 "defense response to Gram-positive bacterium"
evidence=IEA] [GO:0008063 "Toll signaling pathway" evidence=IEA]
[GO:0009620 "response to fungus" evidence=IEA] [GO:0060049
"regulation of protein glycosylation" evidence=IMP] [GO:0048935
"peripheral nervous system neuron development" evidence=IMP]
[GO:0002227 "innate immune response in mucosa" evidence=IMP]
InterPro:IPR000157 InterPro:IPR001611 InterPro:IPR027202
Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
GO:GO:0016021 EMBL:AE014296 InterPro:IPR003591 SMART:SM00369
GO:GO:0005622 InterPro:IPR000372 SMART:SM00013 GO:GO:0004888
GO:GO:0002227 GO:GO:0048935 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00700000104286 GO:GO:0060049 SUPFAM:SSF52200
PANTHER:PTHR24371:SF0 HSSP:O60603 FlyBase:FBgn0029114 EMBL:AF204158
EMBL:AF247764 EMBL:AY118551 RefSeq:NP_524757.1 UniGene:Dm.3403
SMR:Q9V477 IntAct:Q9V477 MINT:MINT-316842 STRING:Q9V477
EnsemblMetazoa:FBtr0075607 GeneID:44497 KEGG:dme:Dmel_CG6890
UCSC:CG6890-RA CTD:44497 InParanoid:Q9V477 OMA:TIRTHNG
GenomeRNAi:44497 NextBio:837325 Uniprot:Q9V477
Length = 1346
Score = 157 (60.3 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 44/132 (33%), Positives = 68/132 (51%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L SL+V+ ++ N+ +S+ A +L + +N I+VL F L+ L LDLA N
Sbjct: 257 LLSLRVVDLSANRLTSLPPELFAETKQLQEIYLRNNSINVLAPGIFGELAELLVLDLASN 316
Query: 70 RIVA--VSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI 127
+ + ++ A+ L L LDLS N + L + PL SLQ L+L+DN I + +
Sbjct: 317 ELNSQWINAATFVGLKRLMMLDLSANKISRLEAHIFRPLASLQILKLEDNYIDQLPGGIF 376
Query: 128 GDNVTITTLTLS 139
D + TL LS
Sbjct: 377 ADLTNLHTLILS 388
Score = 156 (60.0 bits), Expect = 7.4e-10, P = 7.4e-10
Identities = 44/113 (38%), Positives = 59/113 (52%)
Query: 10 LSSLKVLSIAHNQFSS--VRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
L+ L VL +A N+ +S + GL +L L N+I LE H FR L++L L L
Sbjct: 305 LAELLVLDLASNELNSQWINAATFVGLKRLMMLDLSANKISRLEAHIFRPLASLQILKLE 364
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
N I + G A L+NL TL LS N + + Q + LK+L L LD N IS
Sbjct: 365 DNYIDQLPGGIFADLTNLHTLILSRNRISVIEQRTLQGLKNLLVLSLDFNRIS 417
Score = 137 (53.3 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 39/129 (30%), Positives = 66/129 (51%)
Query: 14 KVLSIAHNQFS---SVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
K+ I++ FS S R+ + G L SL N++ L AL L+HL++A N
Sbjct: 187 KIQDISNFYFSASLSSRKARVCG-STLQSLDLSANKMVSLPTAMLSALGRLTHLNMAKNS 245
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDN 130
+ ++ + L +L +DLS N L +L +L K LQE+ L +N I+++ P + G+
Sbjct: 246 MSFLADRAFEGLLSLRVVDLSANRLTSLPPELFAETKQLQEIYLRNNSINVLAPGIFGEL 305
Query: 131 VTITTLTLS 139
+ L L+
Sbjct: 306 AELLVLDLA 314
Score = 132 (51.5 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 34/100 (34%), Positives = 51/100 (51%)
Query: 21 NQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLA 80
N F ++ A G +L L +H++I+VL + +F L L L L N++ A++G
Sbjct: 801 NNFRELQSHAFIGRKRLKVLHLNHSRIEVLHNRTFYGLLELEVLQLQSNQLKALNGNEFQ 860
Query: 81 HLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
L NL L L HN + + T L L+ LRLD N I+
Sbjct: 861 GLDNLQELYLQHNAIATIDTLTFTHLYHLKILRLDHNAIT 900
Score = 132 (51.5 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 41/129 (31%), Positives = 65/129 (50%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
R L+SL++L + N + G A L L +L N+I V+E + + L L L L
Sbjct: 353 RPLASLQILKLEDNYIDQLPGGIFADLTNLHTLILSRNRISVIEQRTLQGLKNLLVLSLD 412
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI 127
NRI + SL + S L L L+ N L+A+ + L ++ L+ L + +N IS +
Sbjct: 413 FNRISRMDQRSLVNCSQLQDLHLNDNKLQAVPEAL-AHVQLLKTLDVGENMISQI----- 466
Query: 128 GDNVTITTL 136
+N +IT L
Sbjct: 467 -ENTSITQL 474
Score = 129 (50.5 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 34/105 (32%), Positives = 47/105 (44%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
LKVL + H++ + GL +L L NQ+ L + F+ L L L L HN I
Sbjct: 817 LKVLHLNHSRIEVLHNRTFYGLLELEVLQLQSNQLKALNGNEFQGLDNLQELYLQHNAIA 876
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
+ + HL +L L L HN + + P L ELRL N
Sbjct: 877 TIDTLTFTHLYHLKILRLDHNAITSFAVWNFLP-SYLNELRLASN 920
Score = 129 (50.5 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 40/132 (30%), Positives = 59/132 (44%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L +L ++ N+ S + L L L N ID L F L+ L L L+ N
Sbjct: 331 LKRLMMLDLSANKISRLEAHIFRPLASLQILKLEDNYIDQLPGGIFADLTNLHTLILSRN 390
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
RI + +L L NL L L N + + Q + LQ+L L+DN + V P+ +
Sbjct: 391 RISVIEQRTLQGLKNLLVLSLDFNRISRMDQRSLVNCSQLQDLHLNDNKLQAV-PEALAH 449
Query: 130 NVTITTLTLSGE 141
+ TL + GE
Sbjct: 450 VQLLKTLDV-GE 460
Score = 120 (47.3 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 32/135 (23%), Positives = 63/135 (46%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T++ L +L VLS+ N+ S + + +L +L L + N++ + + + + L LD
Sbjct: 399 TLQGLKNLLVLSLDFNRISRMDQRSLVNCSQLQDLHLNDNKLQAVPE-ALAHVQLLKTLD 457
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
+ N I + S+ L +L L ++ N L + + + + SLQ L L N + +
Sbjct: 458 VGENMISQIENTSITQLESLYGLRMTENSLTHIRRGVFDRMSSLQILNLSQNKLKSIEAG 517
Query: 126 VIGDNVTITTLTLSG 140
+ N + + L G
Sbjct: 518 SLQRNSQLQAIRLDG 532
Score = 115 (45.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 30/110 (27%), Positives = 54/110 (49%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
S+L+ L ++ N+ S+ L+ L +LT L+ N + L D +F L +L +DL+ NR
Sbjct: 210 STLQSLDLSANKMVSLPTAMLSALGRLTHLNMAKNSMSFLADRAFEGLLSLRVVDLSANR 269
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
+ ++ A L + L +N + L + L L L L N+++
Sbjct: 270 LTSLPPELFAETKQLQEIYLRNNSINVLAPGIFGELAELLVLDLASNELN 319
Score = 110 (43.8 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 34/130 (26%), Positives = 60/130 (46%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
S L+ L + N+ +V ALA + L +L N I +E+ S L +L L + N
Sbjct: 428 SQLQDLHLNDNKLQAVPE-ALAHVQLLKTLDVGENMISQIENTSITQLESLYGLRMTENS 486
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDN 130
+ + +S+L L+LS N L+++ + LQ +RLD N + + + +
Sbjct: 487 LTHIRRGVFDRMSSLQILNLSQNKLKSIEAGSLQRNSQLQAIRLDGNQLKSIA-GLFTEL 545
Query: 131 VTITTLTLSG 140
+ L +SG
Sbjct: 546 PNLVWLNISG 555
Score = 106 (42.4 bits), Expect = 0.00016, P = 0.00016
Identities = 38/134 (28%), Positives = 64/134 (47%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
+++R S L+ + + NQ S+ G L L L+ N+++ D+S + L LD
Sbjct: 518 SLQRNSQLQAIRLDGNQLKSIA-GLFTELPNLVWLNISGNRLEKF-DYSHIPIG-LQWLD 574
Query: 66 LAHNRIVAVSGA-SLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTP 124
+ NRI + + +L+T D S+N L +T I P S++ L L+DN IS + P
Sbjct: 575 VRANRITQLGNYFEIESELSLSTFDASYNLLTEITASSI-P-NSVEVLYLNDNQISKIQP 632
Query: 125 DVIGDNVTITTLTL 138
+T + L
Sbjct: 633 YTFFKKPNLTRVDL 646
>FB|FBgn0038504 [details] [associations]
symbol:Sur-8 "Sur-8" species:7227 "Drosophila melanogaster"
[GO:0017016 "Ras GTPase binding" evidence=ISS] [GO:0000164 "protein
phosphatase type 1 complex" evidence=IEA] [GO:0046579 "positive
regulation of Ras protein signal transduction" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027036 PROSITE:PS51450
EMBL:AE014297 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
InterPro:IPR025875 Pfam:PF12799 GeneTree:ENSGT00600000084236
OMA:LPHGIGN PANTHER:PTHR23155:SF38 ChiTaRS:SHOC2 EMBL:AY128499
EMBL:BT003235 RefSeq:NP_650620.3 RefSeq:NP_732231.2
UniGene:Dm.13957 ProteinModelPortal:Q9VEK6 SMR:Q9VEK6 STRING:Q9VEK6
PaxDb:Q9VEK6 PRIDE:Q9VEK6 EnsemblMetazoa:FBtr0083447
EnsemblMetazoa:FBtr0083448 EnsemblMetazoa:FBtr0333933 GeneID:42093
KEGG:dme:Dmel_CG5407 UCSC:CG5407-RA CTD:42093 FlyBase:FBgn0038504
InParanoid:Q8MQM0 OrthoDB:EOG4C867K PhylomeDB:Q9VEK6
GenomeRNAi:42093 NextBio:827133 Bgee:Q9VEK6 Uniprot:Q9VEK6
Length = 641
Score = 153 (58.9 bits), Expect = 5.9e-10, P = 5.9e-10
Identities = 45/131 (34%), Positives = 71/131 (54%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
+++ S LKVL + HN+ + + + L LT+L N+I + D R L L+ L
Sbjct: 224 SLQNCSQLKVLDLRHNKLAEIPP-VIYRLRSLTTLYLRFNRITAVAD-DLRQLVNLTMLS 281
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
L N+I + G+++ L NLTTLD+SHN L L +D I +L L L N++ + PD
Sbjct: 282 LRENKIREL-GSAIGALVNLTTLDVSHNHLEHLPED-IGNCVNLSALDLQHNELLDI-PD 338
Query: 126 VIGDNVTITTL 136
IG+ ++ L
Sbjct: 339 SIGNLKSLVRL 349
Score = 137 (53.3 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 38/133 (28%), Positives = 71/133 (53%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
+R+L +L +LS+ N+ + A+ L LT+L HN ++ L + ++ LS LDL
Sbjct: 271 LRQLVNLTMLSLRENKIRELG-SAIGALVNLTTLDVSHNHLEHLPEDIGNCVN-LSALDL 328
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDV 126
HN ++ + S+ +L +L L + +N L ++ L KS+ E ++ N I+ + +
Sbjct: 329 QHNELLDIPD-SIGNLKSLVRLGMRYNRLSSVPATLKN-CKSMDEFNVEGNGITQLPDGM 386
Query: 127 IGDNVTITTLTLS 139
+ +TT+TLS
Sbjct: 387 LASLSGLTTITLS 399
Score = 127 (49.8 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 36/111 (32%), Positives = 58/111 (52%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
+ L +L++L +++N + + L KL L N+I+VL H L L L L
Sbjct: 481 IMNLQNLEILILSNNMLKKIPN-TIGNLRKLRILDLEENRIEVLP-HEIGLLHELQRLIL 538
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
N+I + S+ HL NLT L +S N L+ L ++ I L+SL+ L ++ N
Sbjct: 539 QTNQITMLP-RSIGHLGNLTHLSVSENNLQFLPEE-IGSLESLENLYINQN 587
Score = 114 (45.2 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 34/137 (24%), Positives = 63/137 (45%)
Query: 2 SIWCTVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTL 61
S+ T++ S+ ++ N + + G LA L LT+++ NQ + +
Sbjct: 358 SVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSRNQFASYPTGGPAQFTNV 417
Query: 62 SHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISM 121
++L HNRI + + LT L++ N L AL D+ T + ++ EL L N +
Sbjct: 418 YSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWV-NMVELNLATNALQK 476
Query: 122 VTPDVIG-DNVTITTLT 137
+ D++ N+ I L+
Sbjct: 477 LPDDIMNLQNLEILILS 493
Score = 110 (43.8 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 33/134 (24%), Positives = 63/134 (47%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
++ L SL L + +N+ SSV L + + N I L D +LS L+ +
Sbjct: 339 SIGNLKSLVRLGMRYNRLSSVP-ATLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTIT 397
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
L+ N+ + A +N+ +++L HN + + + + K L +L + +N ++ + D
Sbjct: 398 LSRNQFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLD 457
Query: 126 VIGDNVTITTLTLS 139
IG V + L L+
Sbjct: 458 -IGTWVNMVELNLA 470
>UNIPROTKB|Q9BZR6 [details] [associations]
symbol:RTN4R "Reticulon-4 receptor" species:9606 "Homo
sapiens" [GO:0031225 "anchored to membrane" evidence=IEA]
[GO:0009986 "cell surface" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0004872 "receptor activity"
evidence=NAS] [GO:0016020 "membrane" evidence=NAS] [GO:0007409
"axonogenesis" evidence=NAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0048011 "neurotrophin TRK receptor signaling
pathway" evidence=TAS] [GO:0050770 "regulation of axonogenesis"
evidence=TAS] [GO:0050771 "negative regulation of axonogenesis"
evidence=TAS] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005783 GO:GO:0005886
Reactome:REACT_111102 GO:GO:0048011
Pathway_Interaction_DB:p75ntrpathway GO:GO:0009986 GO:GO:0031225
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0004872 GO:GO:0007409 EMBL:CH471176
InterPro:IPR000372 SMART:SM00013 GO:GO:0050771 HOGENOM:HOG000116109
HOVERGEN:HBG063707 EMBL:AF283463 EMBL:AL834449 EMBL:AY358297
EMBL:CR456360 EMBL:AC058790 EMBL:AC007663 EMBL:BC011787
IPI:IPI00289204 RefSeq:NP_075380.1 UniGene:Hs.30868 PDB:1OZN
PDB:1P8T PDBsum:1OZN PDBsum:1P8T ProteinModelPortal:Q9BZR6
SMR:Q9BZR6 IntAct:Q9BZR6 STRING:Q9BZR6 DMDM:25453267 PRIDE:Q9BZR6
DNASU:65078 Ensembl:ENST00000043402 GeneID:65078 KEGG:hsa:65078
UCSC:uc002zru.3 CTD:65078 GeneCards:GC22M020234 HGNC:HGNC:18601
HPA:CAB012443 MIM:605566 neXtProt:NX_Q9BZR6 PharmGKB:PA38600
InParanoid:Q9BZR6 KO:K16659 PhylomeDB:Q9BZR6
EvolutionaryTrace:Q9BZR6 GenomeRNAi:65078 NextBio:67268 Bgee:Q9BZR6
CleanEx:HS_RTN4R Genevestigator:Q9BZR6 GermOnline:ENSG00000040608
Uniprot:Q9BZR6
Length = 473
Score = 151 (58.2 bits), Expect = 5.9e-10, P = 5.9e-10
Identities = 39/110 (35%), Positives = 57/110 (51%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
R L++L+ L + N ++ L LT L H N+I + + +FR L +L L L
Sbjct: 151 RGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLH 210
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
NR+ V + L L TL L N L AL + + PL++LQ LRL+DN
Sbjct: 211 QNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 260
Score = 116 (45.9 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 38/121 (31%), Positives = 55/121 (45%)
Query: 21 NQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN-RIVAVSGASL 79
N+ S V + LT L H N + ++ +F L+ L LDL+ N ++ +V A+
Sbjct: 67 NRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATF 126
Query: 80 AHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTLTLS 139
L L TL L L+ L L L +LQ L L DN + + D D +T L L
Sbjct: 127 HGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLH 186
Query: 140 G 140
G
Sbjct: 187 G 187
Score = 111 (44.1 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 39/130 (30%), Positives = 58/130 (44%)
Query: 10 LSSLKVLSIAHN-QFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 68
L+ L+ L ++ N Q SV GL +L +L + L FR L+ L +L L
Sbjct: 104 LALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQD 163
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
N + A+ + L NLT L L N + ++ + L SL L L N ++ V P
Sbjct: 164 NALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFR 223
Query: 129 DNVTITTLTL 138
D + TL L
Sbjct: 224 DLGRLMTLYL 233
Score = 106 (42.4 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 32/88 (36%), Positives = 43/88 (48%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T R L +L L + N+ SSV A GL L L H N++ + H+FR L L L
Sbjct: 173 TFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLY 232
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHN 93
L N + A+ +LA L L L L+ N
Sbjct: 233 LFANNLSALPTEALAPLRALQYLRLNDN 260
>FB|FBgn0004364 [details] [associations]
symbol:18w "18 wheeler" species:7227 "Drosophila
melanogaster" [GO:0005886 "plasma membrane" evidence=ISS;IDA]
[GO:0004888 "transmembrane signaling receptor activity"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=IDA] [GO:0009653
"anatomical structure morphogenesis" evidence=IMP] [GO:0006955
"immune response" evidence=IEP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0019731 "antibacterial humoral response"
evidence=NAS;IMP;TAS] [GO:0048598 "embryonic morphogenesis"
evidence=TAS] [GO:0006952 "defense response" evidence=TAS]
[GO:0007165 "signal transduction" evidence=IEA;ISS] [GO:0016021
"integral to membrane" evidence=ISS] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0019730 "antimicrobial
humoral response" evidence=IMP] InterPro:IPR000157
InterPro:IPR001611 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 GO:GO:0016021 GO:GO:0005886 GO:GO:0005737
GO:GO:0048598 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007155 GO:GO:0019731 InterPro:IPR000372
SMART:SM00013 GO:GO:0004888 InterPro:IPR026906 Pfam:PF13306
SUPFAM:SSF52200 FlyBase:FBgn0004364 EMBL:L23171 PIR:T13852
PIR:T13887 HSSP:O60603 ProteinModelPortal:Q24591 STRING:Q24591
PRIDE:Q24591 InParanoid:Q24591 ArrayExpress:Q24591 Bgee:Q24591
Uniprot:Q24591
Length = 1389
Score = 157 (60.3 bits), Expect = 6.0e-10, P = 6.0e-10
Identities = 42/130 (32%), Positives = 66/130 (50%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L +L L++A N+ ++ GL LT L+ ++N + ++E +FR S L LDL+ N
Sbjct: 380 LYNLHTLNLAENRLHTLDNRIFNGLYVLTKLTLNNNLVSIVESQAFRNCSDLKELDLSSN 439
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
++ V A + LS L TLDL N + + L L LRL DN I +T + D
Sbjct: 440 QLTEVPEA-VQDLSMLKTLDLGENQISEFKNNTFRNLNQLTGLRLIDNRIGNITVGMFQD 498
Query: 130 NVTITTLTLS 139
++ L L+
Sbjct: 499 LPRLSVLNLA 508
Score = 134 (52.2 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 41/135 (30%), Positives = 66/135 (48%)
Query: 7 VRRLSSLKVLSIAHNQFSS--VRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHL 64
+ RL L VL ++ NQ +S V AGL +L L+ +N + + +F+ L L L
Sbjct: 303 LHRLEQLLVLDLSGNQLTSHHVDNSTFAGLIRLIVLNLSNNALTRIGSKTFKELYFLQIL 362
Query: 65 DLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTP 124
D+ +N I + + L NL TL+L+ N L L + L L +L L++N +S+V
Sbjct: 363 DMRNNSIGHIEEGAFLPLYNLHTLNLAENRLHTLDNRIFNGLYVLTKLTLNNNLVSIVES 422
Query: 125 DVIGDNVTITTLTLS 139
+ + L LS
Sbjct: 423 QAFRNCSDLKELDLS 437
Score = 128 (50.1 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 34/115 (29%), Positives = 57/115 (49%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T + L L++L + +N + GA L L +L+ N++ L++ F L L+ L
Sbjct: 352 TFKELYFLQILDMRNNSIGHIEEGAFLPLYNLHTLNLAENRLHTLDNRIFNGLYVLTKLT 411
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
L +N + V + + S+L LDLS N L + + + L L+ L L +N IS
Sbjct: 412 LNNNLVSIVESQAFRNCSDLKELDLSSNQLTEVPE-AVQDLSMLKTLDLGENQIS 465
Score = 128 (50.1 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 37/129 (28%), Positives = 66/129 (51%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
R S LK L ++ NQ + V A+ L L +L NQI ++++FR L+ L+ L L
Sbjct: 426 RNCSDLKELDLSSNQLTEVPE-AVQDLSMLKTLDLGENQISEFKNNTFRNLNQLTGLRLI 484
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI 127
NRI ++ L L+ L+L+ N ++++ + ++ +RLD N ++ D+
Sbjct: 485 DNRIGNITVGMFQDLPRLSVLNLAKNRIQSIERGAFDKNTEIEAIRLDKNFLT----DIN 540
Query: 128 GDNVTITTL 136
G T+ +L
Sbjct: 541 GIFATLASL 549
Score = 124 (48.7 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 36/113 (31%), Positives = 57/113 (50%)
Query: 29 GALAGLDKLTSLSCHHNQIDVLEDH-SFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTT 87
GA++G +L +L N++ L D L L L L HN I ++ +LA LS+L
Sbjct: 204 GAVSGGSELQTLDVSFNELRSLPDAWGASRLRRLQTLSLQHNNISTLAPNALAGLSSLRV 263
Query: 88 LDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTLTLSG 140
L++S+N L +L + K L+EL L ND+ + ++ + L LSG
Sbjct: 264 LNISYNHLVSLPSEAFAGNKELRELHLQGNDLYELPKGLLHRLEQLLVLDLSG 316
Score = 123 (48.4 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 35/113 (30%), Positives = 54/113 (47%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
V+ LS LK L + NQ S + L++LT L N+I + F+ L LS L+L
Sbjct: 448 VQDLSMLKTLDLGENQISEFKNNTFRNLNQLTGLRLIDNRIGNITVGMFQDLPRLSVLNL 507
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
A NRI ++ + + + + L NFL + + L SL L L +N +
Sbjct: 508 AKNRIQSIERGAFDKNTEIEAIRLDKNFLTDIN-GIFATLASLLWLNLSENHL 559
Score = 116 (45.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 38/116 (32%), Positives = 53/116 (45%)
Query: 9 RLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 68
RL L+ LS+ HN S++ ALAGL L L+ +N + L +F L L L
Sbjct: 233 RLRRLQTLSLQHNNISTLAPNALAGLSSLRVLNISYNHLVSLPSEAFAGNKELRELHLQG 292
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLIT--PLKSLQELRLDDNDISMV 122
N + + L L L LDLS N L + D T L L L L +N ++ +
Sbjct: 293 NDLYELPKGLLHRLEQLLVLDLSGNQLTSHHVDNSTFAGLIRLIVLNLSNNALTRI 348
Score = 113 (44.8 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 31/100 (31%), Positives = 48/100 (48%)
Query: 21 NQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLA 80
N + G L G L +L + + + L++ S L L L L +N++ A+ G
Sbjct: 802 NNMPELEVGHLTGRRNLRALYLNASNLMTLQNGSLAQLVNLRVLHLENNKLTALEGTEFR 861
Query: 81 HLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
L L L L +N L ++ PL SL+ LRLD+N +S
Sbjct: 862 SLGLLRELYLHNNMLTHISNATFEPLVSLEVLRLDNNRLS 901
Score = 107 (42.7 bits), Expect = 0.00013, P = 0.00013
Identities = 36/112 (32%), Positives = 56/112 (50%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T RR +L+ L + + +++ G+LA L L L +N++ LE FR+L L L
Sbjct: 813 TGRR--NLRALYLNASNLMTLQNGSLAQLVNLRVLHLENNKLTALEGTEFRSLGLLRELY 870
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
L +N + +S A+ L +L L L +N L +L + SLQ L L N
Sbjct: 871 LHNNMLTHISNATFEPLVSLEVLRLDNNRLSSLPH--LQYRHSLQGLTLGRN 920
>RGD|68429 [details] [associations]
symbol:Igfals "insulin-like growth factor binding protein, acid
labile subunit" species:10116 "Rattus norvegicus" [GO:0005520
"insulin-like growth factor binding" evidence=IDA] [GO:0005634
"nucleus" evidence=ISO] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0042567 "insulin-like growth
factor ternary complex" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 RGD:68429
GO:GO:0043231 GO:GO:0005634 GO:GO:0007165 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0007155 CTD:3483 HOGENOM:HOG000033909 HOVERGEN:HBG000327
OrthoDB:EOG4FFD1R GO:GO:0005520 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0042567 EMBL:S46785 IPI:IPI00202416 PIR:JC1282
RefSeq:NP_445781.2 UniGene:Rn.7327 ProteinModelPortal:P35859
STRING:P35859 PRIDE:P35859 GeneID:79438 KEGG:rno:79438
UCSC:RGD:68429 InParanoid:P35859 NextBio:614812 ArrayExpress:P35859
Genevestigator:P35859 GermOnline:ENSRNOG00000015061 Uniprot:P35859
Length = 603
Score = 152 (58.6 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 41/113 (36%), Positives = 56/113 (49%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
SL LS++ N + G GL L L+ N + VL D F+ L L L LA N++
Sbjct: 147 SLASLSLSSNLLGRLEEGLFQGLSHLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGNKL 206
Query: 72 VAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTP 124
+ A L L LDLS N LR++ ++ L LQ+L LD N I+ V P
Sbjct: 207 TYLQPALFCGLGELRELDLSRNALRSVKANVFVHLPRLQKLYLDRNLITAVAP 259
Score = 152 (58.6 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 38/119 (31%), Positives = 60/119 (50%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T LS L+ L + N SS+ +LAGL +L L N++ L F+ L L +L
Sbjct: 405 TFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTTNRLTHLPRQLFQGLGHLEYLL 464
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTP 124
L++N++ +S L L LD+SHN L L + L + L ++ L L +N + +P
Sbjct: 465 LSYNQLTTLSAEVLGPLQRAFWLDISHNHLETLAEGLFSSLGRVRYLSLRNNSLQTFSP 523
Score = 150 (57.9 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 41/119 (34%), Positives = 63/119 (52%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L ++ V++++ N S+ GLDKL SL H+ + + H+F LS L L L N
Sbjct: 361 LFNVAVMNLSGNCLRSLPERVFQGLDKLHSLHLEHSCLGHVRLHTFAGLSGLRRLFLRDN 420
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
I ++ SLA LS L LDL+ N L L + L L L+ L L N ++ ++ +V+G
Sbjct: 421 SISSIEEQSLAGLSELLELDLTTNRLTHLPRQLFQGLGHLEYLLLSYNQLTTLSAEVLG 479
Score = 144 (55.7 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 41/131 (31%), Positives = 60/131 (45%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L+ L + N ++V GA G+ L L HN++ L + +F L L L LAHN
Sbjct: 241 LPRLQKLYLDRNLITAVAPGAFLGMKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRLAHN 300
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
I ++ + L L L L HN +R L + L L+ L L+DN I+ V
Sbjct: 301 AIASLRPRTFKDLHFLEELQLGHNRIRQLGERTFEGLGQLEVLTLNDNQITEVRVGAFSG 360
Query: 130 NVTITTLTLSG 140
+ + LSG
Sbjct: 361 LFNVAVMNLSG 371
Score = 135 (52.6 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 37/113 (32%), Positives = 55/113 (48%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L VL +AHN +S+R L L L HN+I L + +F L L L L N
Sbjct: 289 LLGLHVLRLAHNAIASLRPRTFKDLHFLEELQLGHNRIRQLGERTFEGLGQLEVLTLNDN 348
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
+I V + + L N+ ++LS N LR+L + + L L L L+ + + V
Sbjct: 349 QITEVRVGAFSGLFNVAVMNLSGNCLRSLPERVFQGLDKLHSLHLEHSCLGHV 401
Score = 126 (49.4 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 33/110 (30%), Positives = 50/110 (45%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L+ L ++ N SV+ L +L L N I + +F + L LDL+HN
Sbjct: 217 LGELRELDLSRNALRSVKANVFVHLPRLQKLYLDRNLITAVAPGAFLGMKALRWLDLSHN 276
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
R+ + + L L L L+HN + +L L L+EL+L N I
Sbjct: 277 RVAGLMEDTFPGLLGLHVLRLAHNAIASLRPRTFKDLHFLEELQLGHNRI 326
Score = 124 (48.7 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 37/120 (30%), Positives = 55/120 (45%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L +L L +A N+ + ++ GL +L L N + ++ + F L L L L N
Sbjct: 193 LGNLHELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVKANVFVHLPRLQKLYLDRN 252
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
I AV+ + + L LDLSHN + L +D L L LRL N I+ + P D
Sbjct: 253 LITAVAPGAFLGMKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRLAHNAIASLRPRTFKD 312
Score = 121 (47.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 37/129 (28%), Positives = 56/129 (43%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L L + H+ VR AGL L L N I +E+ S LS L LDL N
Sbjct: 385 LDKLHSLHLEHSCLGHVRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTTN 444
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
R+ + L +L L LS+N L L+ +++ PL+ L + N + + +
Sbjct: 445 RLTHLPRQLFQGLGHLEYLLLSYNQLTTLSAEVLGPLQRAFWLDISHNHLETLAEGLFSS 504
Query: 130 NVTITTLTL 138
+ L+L
Sbjct: 505 LGRVRYLSL 513
Score = 120 (47.3 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 35/115 (30%), Positives = 56/115 (48%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T L L+VL++ NQ + VR GA +GL + ++ N + L + F+ L L L
Sbjct: 333 TFEGLGQLEVLTLNDNQITEVRVGAFSGLFNVAVMNLSGNCLRSLPERVFQGLDKLHSLH 392
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
L H+ + V + A LS L L L N + ++ + + L L EL L N ++
Sbjct: 393 LEHSCLGHVRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTTNRLT 447
Score = 120 (47.3 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 40/149 (26%), Positives = 67/149 (44%)
Query: 1 MSIWCTVRRLSSL--------KVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLED 52
+S++C+ + L+ L + L + N SS+ A L L L+ + + LE
Sbjct: 56 LSVFCSSKNLTHLPDDIPVSTRALWLDGNNLSSIPSAAFQNLSSLDFLNLQGSWLRSLEP 115
Query: 53 HSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQEL 112
+ L L +L L NR+ ++ H +L +L LS N L L + L L L +L
Sbjct: 116 QALLGLQNLYYLHLERNRLRNLAVGLFTHTPSLASLSLSSNLLGRLEEGLFQGLSHLWDL 175
Query: 113 RLDDNDISMVTPDVIGDNV-TITTLTLSG 140
L N + +V PD + + + L L+G
Sbjct: 176 NLGWNSL-VVLPDTVFQGLGNLHELVLAG 203
Score = 109 (43.4 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 37/117 (31%), Positives = 52/117 (44%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L +L L + N+ ++ G L SLS N + LE+ F+ LS L L+L N
Sbjct: 121 LQNLYYLHLERNRLRNLAVGLFTHTPSLASLSLSSNLLGRLEEGLFQGLSHLWDLNLGWN 180
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDV 126
+V + L NL L L+ N L L L L L+EL L N + V +V
Sbjct: 181 SLVVLPDTVFQGLGNLHELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVKANV 237
Score = 104 (41.7 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 29/108 (26%), Positives = 48/108 (44%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
+ +L+ L ++HN+ + + GL L L HN I L +F+ L L L L HN
Sbjct: 265 MKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRLAHNAIASLRPRTFKDLHFLEELQLGHN 324
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
RI + + L L L L+ N + + + L ++ + L N
Sbjct: 325 RIRQLGERTFEGLGQLEVLTLNDNQITEVRVGAFSGLFNVAVMNLSGN 372
Score = 104 (41.7 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 31/117 (26%), Positives = 54/117 (46%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T + L L+ L + HN+ + GL +L L+ + NQI + +F L ++ ++
Sbjct: 309 TFKDLHFLEELQLGHNRIRQLGERTFEGLGQLEVLTLNDNQITEVRVGAFSGLFNVAVMN 368
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
L+ N + ++ L L +L L H+ L + L L+ L L DN IS +
Sbjct: 369 LSGNCLRSLPERVFQGLDKLHSLHLEHSCLGHVRLHTFAGLSGLRRLFLRDNSISSI 425
Score = 101 (40.6 bits), Expect = 0.00082, P = 0.00082
Identities = 34/130 (26%), Positives = 54/130 (41%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
LS L L++ N + GL L L N++ L+ F L L LDL+ N
Sbjct: 169 LSHLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGNKLTYLQPALFCGLGELRELDLSRN 228
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+ +V HL L L L N + A+ +K+L+ L L N ++ + D
Sbjct: 229 ALRSVKANVFVHLPRLQKLYLDRNLITAVAPGAFLGMKALRWLDLSHNRVAGLMEDTFPG 288
Query: 130 NVTITTLTLS 139
+ + L L+
Sbjct: 289 LLGLHVLRLA 298
>FB|FBgn0261269 [details] [associations]
symbol:conv "convoluted" species:7227 "Drosophila
melanogaster" [GO:0035151 "regulation of tube size, open tracheal
system" evidence=IMP] [GO:0007424 "open tracheal system
development" evidence=IMP] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0035159 "regulation of tube length, open tracheal
system" evidence=IMP] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 EMBL:AE013599 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0008045
GeneTree:ENSGT00690000101816 GO:GO:0035159 InterPro:IPR026906
Pfam:PF13306 EMBL:EU814872 RefSeq:NP_610948.2 UniGene:Dm.23922
SMR:A1Z9N6 STRING:A1Z9N6 EnsemblMetazoa:FBtr0087540 GeneID:36588
KEGG:dme:Dmel_CG8561 UCSC:CG8561-RA CTD:36588 FlyBase:FBgn0261269
InParanoid:A1Z9N6 OMA:TIVCENT OrthoDB:EOG4ZGMT6 GenomeRNAi:36588
NextBio:799366 Uniprot:A1Z9N6
Length = 1092
Score = 155 (59.6 bits), Expect = 7.3e-10, P = 7.3e-10
Identities = 39/114 (34%), Positives = 61/114 (53%)
Query: 9 RLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 68
+L L + ++HN SS+ G L L S+ HN + ++ +F L TL +DL+H
Sbjct: 459 KLYELHTIDVSHNNISSIFNGVFQTLFSLRSIDLSHNSMREIKSSTFGTLPTLLEMDLSH 518
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
N +V+V SLA L++L L L++N L L Q P+ SL EL N ++ +
Sbjct: 519 NELVSVVRGSLAKLTSLRQLYLNNNQLEKLFQ---LPI-SLNELYFSHNRLTNI 568
Score = 153 (58.9 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 31/113 (27%), Positives = 64/113 (56%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
++ ++ LKVL+ ++N + + + L +L ++ HN I + + F+ L +L +DL
Sbjct: 433 IQNMTGLKVLNASYNSITEIPKNCFPKLYELHTIDVSHNNISSIFNGVFQTLFSLRSIDL 492
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
+HN + + ++ L L +DLSHN L ++ + + L SL++L L++N +
Sbjct: 493 SHNSMREIKSSTFGTLPTLLEMDLSHNELVSVVRGSLAKLTSLRQLYLNNNQL 545
Score = 153 (58.9 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 44/134 (32%), Positives = 70/134 (52%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T L +L + ++HN+ SV RG+LA L L L ++NQ++ L F+ +L+ L
Sbjct: 504 TFGTLPTLLEMDLSHNELVSVVRGSLAKLTSLRQLYLNNNQLEKL----FQLPISLNELY 559
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLR-ALTQDLITPLKSLQELRLDDNDISMVTP 124
+HNR+ + + +++L LDLSHN L L + T L +Q L+L +N IS
Sbjct: 560 FSHNRLTNIPSGTWPVMNSLIYLDLSHNQLGDTLNGESFTGLLVVQRLKLQNNGISQPPK 619
Query: 125 DVIGDNVTITTLTL 138
D + T+ L L
Sbjct: 620 DAVAVMSTLQYLHL 633
Score = 147 (56.8 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 32/106 (30%), Positives = 60/106 (56%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVL--EDHSFRALSTLSHLDLAHNRIVA 73
L ++HNQ + +RRG ++ L SL +N++ L E+H F LS LDL+HN+I
Sbjct: 782 LDVSHNQINDLRRGVISNFTSLQSLDMSYNELSNLKSEEHIFDLPQNLSWLDLSHNKIYH 841
Query: 74 VSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
+ A+L + +L +DL++N L + ++ +++ ++ L N +
Sbjct: 842 LPFANLVKVKSLKYVDLTNNSLEDVPASIVGSMRNGSQVLLAGNPL 887
Score = 147 (56.8 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 40/134 (29%), Positives = 63/134 (47%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T + L LK L + NQ +++R L +L L HNQI LE L+ L +
Sbjct: 193 TFQPLRKLKTLDLHGNQLENLKRNQFKNLRELEVLDISHNQIKKLEAQHIADLTKLGWCN 252
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
++HN + +S + A S L L LSHN + L + ++ L+ L L DN ++ +
Sbjct: 253 VSHNALSELSRGTFARNSVLKVLHLSHNQIARLDANSFRGMRFLRRLFLSDNVLTDIGRG 312
Query: 126 VIGDNVTITTLTLS 139
G I T+ L+
Sbjct: 313 TFGSIARIGTIDLA 326
Score = 138 (53.6 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 33/120 (27%), Positives = 61/120 (50%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L+ L +++HN S + RG A L L HNQI L+ +SFR + L L L+ N
Sbjct: 245 LTKLGWCNVSHNALSELSRGTFARNSVLKVLHLSHNQIARLDANSFRGMRFLRRLFLSDN 304
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+ + + ++ + T+DL+ N L+ + + T + ++ L L +N+I+ + + D
Sbjct: 305 VLTDIGRGTFGSIARIGTIDLARNRLKKIEFQMFTQMNYVELLDLAENNITKIEKNSFKD 364
Score = 131 (51.2 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 38/117 (32%), Positives = 58/117 (49%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
+S+L+ L + +N +++ R A L L L+ + NQ+ + +F L L L+L+ N
Sbjct: 625 MSTLQYLHLENNNITTLERSAFGKLPVLFELNLYGNQVKDISKRAFEGLLQLLTLNLSSN 684
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRAL---TQDLITPLKSLQELRLDDNDISMVT 123
I + L +L LDLS N L L T ++ L SL+ L L N IS VT
Sbjct: 685 GIQTLQNDIFVGLPSLRNLDLSFNSLTKLDNKTNGVLDDLLSLETLDLSHNRISFVT 741
Score = 130 (50.8 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 32/110 (29%), Positives = 56/110 (50%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
+SL ++ + + S + L KL +L H NQ++ L+ + F+ L L LD++HN+
Sbjct: 174 NSLGIIRVTNGNLSDLPIETFQPLRKLKTLDLHGNQLENLKRNQFKNLRELEVLDISHNQ 233
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
I + +A L+ L ++SHN L L++ L+ L L N I+
Sbjct: 234 IKKLEAQHIADLTKLGWCNVSHNALSELSRGTFARNSVLKVLHLSHNQIA 283
Score = 122 (48.0 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 39/137 (28%), Positives = 67/137 (48%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALS---TLSHLDL 66
L L L+++ N +++ GL L +L N + L++ + L +L LDL
Sbjct: 673 LLQLLTLNLSSNGIQTLQNDIFVGLPSLRNLDLSFNSLTKLDNKTNGVLDDLLSLETLDL 732
Query: 67 AHNRIVAVSGASL-AHLS---NLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
+HNRI V+ + +H NL L+LS+N + LT D+ K L L + N I+ +
Sbjct: 733 SHNRISFVTKKTFPSHQYIPYNLRNLNLSYNLMPILTYDITFGTKKLVRLDVSHNQINDL 792
Query: 123 TPDVIGDNVTITTLTLS 139
VI + ++ +L +S
Sbjct: 793 RRGVISNFTSLQSLDMS 809
Score = 117 (46.2 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 36/131 (27%), Positives = 65/131 (49%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
+L+ L++++N + G KL L HNQI+ L ++L LD+++N +
Sbjct: 754 NLRNLNLSYNLMPILTYDITFGTKKLVRLDVSHNQINDLRRGVISNFTSLQSLDMSYNEL 813
Query: 72 VAV-SGASLAHL-SNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+ S + L NL+ LDLSHN + L + +KSL+ + L +N + V ++G
Sbjct: 814 SNLKSEEHIFDLPQNLSWLDLSHNKIYHLPFANLVKVKSLKYVDLTNNSLEDVPASIVGS 873
Query: 130 NVTITTLTLSG 140
+ + L+G
Sbjct: 874 MRNGSQVLLAG 884
Score = 117 (46.2 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 33/136 (24%), Positives = 71/136 (52%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
++ +L+SL+ L + +NQ + + ++ L L HN++ + ++ +++L +LD
Sbjct: 528 SLAKLTSLRQLYLNNNQLEKLFQLPIS----LNELYFSHNRLTNIPSGTWPVMNSLIYLD 583
Query: 66 LAHNRIV-AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTP 124
L+HN++ ++G S L + L L +N + +D + + +LQ L L++N+I+ +
Sbjct: 584 LSHNQLGDTLNGESFTGLLVVQRLKLQNNGISQPPKDAVAVMSTLQYLHLENNNITTLER 643
Query: 125 DVIGDNVTITTLTLSG 140
G + L L G
Sbjct: 644 SAFGKLPVLFELNLYG 659
Score = 117 (46.2 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 39/138 (28%), Positives = 68/138 (49%)
Query: 9 RLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 68
+L L L++ NQ + + A GL +L +L+ N I L++ F L +L +LDL+
Sbjct: 648 KLPVLFELNLYGNQVKDISKRAFEGLLQLLTLNLSSNGIQTLQNDIFVGLPSLRNLDLSF 707
Query: 69 NRIVAVSGAS---LAHLSNLTTLDLSHNFLRALTQDLITPLK----SLQELRLDDNDISM 121
N + + + L L +L TLDLSHN + +T+ + +L+ L L N + +
Sbjct: 708 NSLTKLDNKTNGVLDDLLSLETLDLSHNRISFVTKKTFPSHQYIPYNLRNLNLSYNLMPI 767
Query: 122 VTPDVIGDNVTITTLTLS 139
+T D+ + L +S
Sbjct: 768 LTYDITFGTKKLVRLDVS 785
Score = 116 (45.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/119 (25%), Positives = 59/119 (49%)
Query: 18 IAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGA 77
+++N +++ + + + L L+ +N I + + F L L +D++HN I ++
Sbjct: 420 LSYNNLTNLAQIPIQNMTGLKVLNASYNSITEIPKNCFPKLYELHTIDVSHNNISSIFNG 479
Query: 78 SLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTL 136
L +L ++DLSHN +R + L +L E+ L N++ V V G +T+L
Sbjct: 480 VFQTLFSLRSIDLSHNSMREIKSSTFGTLPTLLEMDLSHNELVSV---VRGSLAKLTSL 535
Score = 110 (43.8 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 31/134 (23%), Positives = 62/134 (46%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T R S LKVL ++HNQ + + + G+ L L N + + +F +++ + +D
Sbjct: 265 TFARNSVLKVLHLSHNQIARLDANSFRGMRFLRRLFLSDNVLTDIGRGTFGSIARIGTID 324
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
LA NR+ + ++ + LDL+ N + + ++ + + + N + ++
Sbjct: 325 LARNRLKKIEFQMFTQMNYVELLDLAENNITKIEKNSFKDIYQAI-INVSHNALELIETA 383
Query: 126 VIGDNVTITTLTLS 139
+ V IT L LS
Sbjct: 384 AFENCVNITVLDLS 397
Score = 107 (42.7 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 34/131 (25%), Positives = 58/131 (44%)
Query: 10 LSSLKVLSIAHNQFSSVRRG-ALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 68
++SL L ++HNQ G + GL + L +N I + +STL +L L +
Sbjct: 576 MNSLIYLDLSHNQLGDTLNGESFTGLLVVQRLKLQNNGISQPPKDAVAVMSTLQYLHLEN 635
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
N I + ++ L L L+L N ++ +++ L L L L N I + D+
Sbjct: 636 NNITTLERSAFGKLPVLFELNLYGNQVKDISKRAFEGLLQLLTLNLSSNGIQTLQNDIFV 695
Query: 129 DNVTITTLTLS 139
++ L LS
Sbjct: 696 GLPSLRNLDLS 706
Score = 105 (42.0 bits), Expect = 0.00016, P = 0.00016
Identities = 23/125 (18%), Positives = 58/125 (46%)
Query: 15 VLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAV 74
+++++HN + A +T L HN++ SF + ++ L++N + +
Sbjct: 369 IINVSHNALELIETAAFENCVNITVLDLSHNRLANFSRRSFDETTFATYFQLSYNNLTNL 428
Query: 75 SGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTIT 134
+ + +++ L L+ S+N + + ++ L L + + N+IS + V ++
Sbjct: 429 AQIPIQNMTGLKVLNASYNSITEIPKNCFPKLYELHTIDVSHNNISSIFNGVFQTLFSLR 488
Query: 135 TLTLS 139
++ LS
Sbjct: 489 SIDLS 493
Score = 104 (41.7 bits), Expect = 0.00020, P = 0.00020
Identities = 28/128 (21%), Positives = 57/128 (44%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
++ VL ++HN+ ++ R + T +N + L + ++ L L+ ++N I
Sbjct: 390 NITVLDLSHNRLANFSRRSFDETTFATYFQLSYNNLTNLAQIPIQNMTGLKVLNASYNSI 449
Query: 72 VAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNV 131
+ L L T+D+SHN + ++ + L SL+ + L N + + G
Sbjct: 450 TEIPKNCFPKLYELHTIDVSHNNISSIFNGVFQTLFSLRSIDLSHNSMREIKSSTFGTLP 509
Query: 132 TITTLTLS 139
T+ + LS
Sbjct: 510 TLLEMDLS 517
>RGD|2724 [details] [associations]
symbol:Gp5 "glycoprotein V (platelet)" species:10116 "Rattus
norvegicus" [GO:0005518 "collagen binding" evidence=IEA;ISO]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007160 "cell-matrix
adhesion" evidence=IEA;ISO] [GO:0007596 "blood coagulation"
evidence=IEA] [GO:0009986 "cell surface" evidence=IDA] [GO:0010544
"negative regulation of platelet activation" evidence=IEA;ISO]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 RGD:2724 GO:GO:0016021 GO:GO:0009986 GO:GO:0007596
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007160 InterPro:IPR000372 SMART:SM00013
GO:GO:0010544 CTD:2814 HOGENOM:HOG000112798 HOVERGEN:HBG005906
KO:K06260 OrthoDB:EOG4JHCFD EMBL:Z69594 IPI:IPI00195678
RefSeq:NP_036927.1 UniGene:Rn.138111 ProteinModelPortal:O08770
STRING:O08770 PRIDE:O08770 GeneID:25259 KEGG:rno:25259 UCSC:RGD:2724
InParanoid:O08770 NextBio:605903 Genevestigator:O08770
GermOnline:ENSRNOG00000038540 Uniprot:O08770
Length = 567
Score = 151 (58.2 bits), Expect = 8.0e-10, P = 8.0e-10
Identities = 37/111 (33%), Positives = 56/111 (50%)
Query: 8 RRLSSLKVLSIAHNQF-SSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
R LS L+ L + N S++ G GL +L L+ H N ++ L + + R L L + L
Sbjct: 311 RNLSGLQTLGLTRNPLLSALPPGMFHGLTELRVLAVHTNALEELPEDALRGLGRLRQVSL 370
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
HNR+ A+ +LS+L T+ L HN L+ L D+ L L + L N
Sbjct: 371 RHNRLRALPRTLFRNLSSLVTVQLEHNQLKTLPGDVFAALPQLTRVLLGHN 421
Score = 135 (52.6 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 39/132 (29%), Positives = 65/132 (49%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L LKVL ++ N + + +G L KL L + N++ L+ L L+ L L N
Sbjct: 169 LGKLKVLDLSRNNLTHLPQGLLGAQIKLEKLLLYSNRLMSLDSGLLANLGALTELRLERN 228
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI-G 128
+ +++ + L NL+TL LS N L +L L + L L L +N + + P+V+ G
Sbjct: 229 HLRSIAPGAFDSLGNLSTLTLSGNLLESLPPALFLHVSWLTRLTLFENPLEEL-PEVLFG 287
Query: 129 DNVTITTLTLSG 140
+ + L L+G
Sbjct: 288 EMAGLRELWLNG 299
Score = 134 (52.2 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 39/128 (30%), Positives = 58/128 (45%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
L+ L + HN + + L L L + NQ+ L + F +L L LDL+ N +
Sbjct: 124 LEQLFLDHNALRDLDQNLFQKLLNLRDLCLNQNQLSFLPANLFSSLGKLKVLDLSRNNLT 183
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVT 132
+ L L L L N L +L L+ L +L ELRL+ N + + P
Sbjct: 184 HLPQGLLGAQIKLEKLLLYSNRLMSLDSGLLANLGALTELRLERNHLRSIAPGAFDSLGN 243
Query: 133 ITTLTLSG 140
++TLTLSG
Sbjct: 244 LSTLTLSG 251
Score = 117 (46.2 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 38/131 (29%), Positives = 58/131 (44%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
++L +L+ L + NQ S + + L KL L N + L A L L L
Sbjct: 143 QKLLNLRDLCLNQNQLSFLPANLFSSLGKLKVLDLSRNNLTHLPQGLLGAQIKLEKLLLY 202
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI 127
NR++++ LA+L LT L L N LR++ L +L L L N + + P +
Sbjct: 203 SNRLMSLDSGLLANLGALTELRLERNHLRSIAPGAFDSLGNLSTLTLSGNLLESLPPALF 262
Query: 128 GDNVTITTLTL 138
+T LTL
Sbjct: 263 LHVSWLTRLTL 273
Score = 117 (46.2 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 38/133 (28%), Positives = 59/133 (44%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T L LK L + N+ S + R L + L L HN + L+ + F+ L L L
Sbjct: 93 TFNDLVKLKTLRLTRNKISHLPRAILDKMVLLEQLFLDHNALRDLDQNLFQKLLNLRDLC 152
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
L N++ + + L L LDLS N L L Q L+ L++L L N + +
Sbjct: 153 LNQNQLSFLPANLFSSLGKLKVLDLSRNNLTHLPQGLLGAQIKLEKLLLYSNRLMSLDSG 212
Query: 126 VIGDNVTITTLTL 138
++ + +T L L
Sbjct: 213 LLANLGALTELRL 225
Score = 106 (42.4 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 32/110 (29%), Positives = 52/110 (47%)
Query: 30 ALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLD 89
+ +G+ L L + I ++ +F L L L L N+I + A L + L L
Sbjct: 69 SFSGMTVLQRLMLSDSHISAIDPGTFNDLVKLKTLRLTRNKISHLPRAILDKMVLLEQLF 128
Query: 90 LSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTLTLS 139
L HN LR L Q+L L +L++L L+ N +S + ++ + L LS
Sbjct: 129 LDHNALRDLDQNLFQKLLNLRDLCLNQNQLSFLPANLFSSLGKLKVLDLS 178
>TAIR|locus:2094603 [details] [associations]
symbol:RLP37 "receptor like protein 37" species:3702
"Arabidopsis thaliana" [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006952 "defense response" evidence=ISS] [GO:0016301 "kinase
activity" evidence=ISS] [GO:0007165 "signal transduction"
evidence=IC] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
EMBL:CP002686 GenomeReviews:BA000014_GR eggNOG:COG4886
InterPro:IPR025875 Pfam:PF12799 InterPro:IPR013210 Pfam:PF08263
EMBL:AB026655 HOGENOM:HOG000116562 ProtClustDB:CLSN2684197
IPI:IPI00538273 RefSeq:NP_188952.1 UniGene:At.65132
ProteinModelPortal:Q9LS80 SMR:Q9LS80 PRIDE:Q9LS80
EnsemblPlants:AT3G23110.1 GeneID:821886 KEGG:ath:AT3G23110
TAIR:At3g23110 InParanoid:Q9LS80 OMA:INCEWME PhylomeDB:Q9LS80
Genevestigator:Q9LS80 Uniprot:Q9LS80
Length = 835
Score = 153 (58.9 bits), Expect = 8.5e-10, P = 8.5e-10
Identities = 43/131 (32%), Positives = 61/131 (46%)
Query: 10 LSSLKVLSIAHNQFSS-VRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 68
+ SL + ++ NQF + G KLT L +N +D L S L +L HL+L+H
Sbjct: 254 IPSLVDICLSENQFEGPINFGNTTSSSKLTELDVSYNNLDGLIPKSISTLVSLEHLELSH 313
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
N +S++ L NL L LSHN I L +L+ L L ND P I
Sbjct: 314 NNFRGQVPSSISKLVNLDGLYLSHNNFGGQVPSSIFKLVNLEHLDLSHNDFGGRVPSSIS 373
Query: 129 DNVTITTLTLS 139
V +++L LS
Sbjct: 374 KLVNLSSLDLS 384
Score = 118 (46.6 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 34/115 (29%), Positives = 51/115 (44%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
++ L SL+ L ++HN F +++ L L L HN S L L HLD
Sbjct: 299 SISTLVSLEHLELSHNNFRGQVPSSISKLVNLDGLYLSHNNFGGQVPSSIFKLVNLEHLD 358
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
L+HN +S++ L NL++LDLS+N I L + L N +
Sbjct: 359 LSHNDFGGRVPSSISKLVNLSSLDLSYNKFEGHVPQCIWRSSKLDSVDLSYNSFN 413
Score = 104 (41.7 bits), Expect = 0.00015, P = 0.00015
Identities = 36/129 (27%), Positives = 52/129 (40%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
S L L +++N + +++ L L L HN S L L L L+HN
Sbjct: 280 SKLTELDVSYNNLDGLIPKSISTLVSLEHLELSHNNFRGQVPSSISKLVNLDGLYLSHNN 339
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDN 130
+S+ L NL LDLSHN I+ L +L L L N P I +
Sbjct: 340 FGGQVPSSIFKLVNLEHLDLSHNDFGGRVPSSISKLVNLSSLDLSYNKFEGHVPQCIWRS 399
Query: 131 VTITTLTLS 139
+ ++ LS
Sbjct: 400 SKLDSVDLS 408
>MGI|MGI:1096866 [details] [associations]
symbol:Chad "chondroadherin" species:10090 "Mus musculus"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1096866 GO:GO:0005578
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0001502 CTD:1101 HOGENOM:HOG000013150 HOVERGEN:HBG005324
KO:K06248 OrthoDB:EOG4K9BCM OMA:CHCHGGD EMBL:U96626 EMBL:BC012672
IPI:IPI00116674 RefSeq:NP_031715.1 UniGene:Mm.440523
ProteinModelPortal:O55226 SMR:O55226 STRING:O55226 PRIDE:O55226
Ensembl:ENSMUST00000040418 GeneID:12643 KEGG:mmu:12643
InParanoid:O55226 NextBio:281844 Bgee:O55226 CleanEx:MM_CHAD
Genevestigator:O55226 GermOnline:ENSMUSG00000039084 Uniprot:O55226
Length = 358
Score = 147 (56.8 bits), Expect = 9.3e-10, P = 9.3e-10
Identities = 40/122 (32%), Positives = 60/122 (49%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
R + +L L + H V GA GL +L L HN I VL +F L+ L++L L
Sbjct: 71 RTMPNLVSLHLQHCNIREVAAGAFRGLKQLIYLYLSHNDIRVLRAGAFDDLTELTYLYLD 130
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI 127
HN++ + L+ L NL L L++N +R L K L+ L L +N +S + P +
Sbjct: 131 HNKVSELPRGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDLRWLYLSENALSSLQPGSL 190
Query: 128 GD 129
D
Sbjct: 191 DD 192
Score = 131 (51.2 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 34/106 (32%), Positives = 55/106 (51%)
Query: 14 KVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVA 73
K+L++ N F + + + L SL H I + +FR L L +L L+HN I
Sbjct: 53 KLLNLQRNNFPVLAANSFRTMPNLVSLHLQHCNIREVAAGAFRGLKQLIYLYLSHNDIRV 112
Query: 74 VSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
+ + L+ LT L L HN + L + L++PL +L L+L++N I
Sbjct: 113 LRAGAFDDLTELTYLYLDHNKVSELPRGLLSPLVNLFILQLNNNKI 158
Score = 125 (49.1 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 34/116 (29%), Positives = 58/116 (50%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L+ L L + HN+ S + RG L+ L L L ++N+I L +F+ L L L+ N
Sbjct: 121 LTELTYLYLDHNKVSELPRGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDLRWLYLSEN 180
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
+ ++ SL + NL L N L + ++ L+ ++EL+L N + + PD
Sbjct: 181 ALSSLQPGSLDDVENLAKFHLDKNQLSSYPSAALSKLRVVEELKLSHNPLKSI-PD 235
Score = 117 (46.2 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 37/132 (28%), Positives = 57/132 (43%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
R L L L ++HN +R GA L +LT L HN++ L L L L L
Sbjct: 95 RGLKQLIYLYLSHNDIRVLRAGAFDDLTELTYLYLDHNKVSELPRGLLSPLVNLFILQLN 154
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI 127
+N+I + + +L L LS N L +L + +++L + LD N +S +
Sbjct: 155 NNKIRELRAGAFQGAKDLRWLYLSENALSSLQPGSLDDVENLAKFHLDKNQLSSYPSAAL 214
Query: 128 GDNVTITTLTLS 139
+ L LS
Sbjct: 215 SKLRVVEELKLS 226
Score = 108 (43.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 32/100 (32%), Positives = 44/100 (44%)
Query: 40 LSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALT 99
L+ N VL +SFR + L L L H I V+ + L L L LSHN +R L
Sbjct: 55 LNLQRNNFPVLAANSFRTMPNLVSLHLQHCNIREVAAGAFRGLKQLIYLYLSHNDIRVLR 114
Query: 100 QDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTLTLS 139
L L L LD N +S + ++ V + L L+
Sbjct: 115 AGAFDDLTELTYLYLDHNKVSELPRGLLSPLVNLFILQLN 154
Score = 103 (41.3 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 29/126 (23%), Positives = 57/126 (45%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
L+ L ++ N SS++ G+L ++ L NQ+ + L + L L+HN +
Sbjct: 172 LRWLYLSENALSSLQPGSLDDVENLAKFHLDKNQLSSYPSAALSKLRVVEELKLSHNPLK 231
Query: 73 AVSGASLAHLSN-LTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNV 131
++ + L TL L + L + + + +L+ + LD+N ++ + DN+
Sbjct: 232 SIPDNAFQSFGRYLETLWLDNTNLEKFSDAAFSGVTTLKHVHLDNNRLNQLPSSFPFDNL 291
Query: 132 TITTLT 137
TLT
Sbjct: 292 ETLTLT 297
>RGD|1359464 [details] [associations]
symbol:Lrg1 "leucine-rich alpha-2-glycoprotein 1" species:10116
"Rattus norvegicus" [GO:0005615 "extracellular space" evidence=ISO]
[GO:0050873 "brown fat cell differentiation" evidence=ISO]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 RGD:1359464
CTD:116844 HOVERGEN:HBG000045 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 EMBL:BC088434 IPI:IPI00393521
RefSeq:NP_001009717.1 UniGene:Rn.17847 ProteinModelPortal:Q5I0E1
GeneID:367455 KEGG:rno:367455 NextBio:691280 Genevestigator:Q5I0E1
Uniprot:Q5I0E1
Length = 332
Score = 146 (56.5 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 37/127 (29%), Positives = 59/127 (46%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
L+VL + N S+ G L +L NQ+ + L L +LDLA NR+
Sbjct: 101 LRVLDLTRNALRSLPPGLFRSSAALNTLVLRENQLQEASARWLQGLDALGYLDLAENRLR 160
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVT 132
++ LA+L L TLDL HN L +L + + + LQ L L+ N + + ++
Sbjct: 161 SLPARLLANLGALHTLDLGHNLLESLPEGFLRGPRRLQRLHLEGNRLQRLEAGLLAPQPF 220
Query: 133 ITTLTLS 139
+ L L+
Sbjct: 221 LGVLFLN 227
Score = 120 (47.3 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 37/115 (32%), Positives = 51/115 (44%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L +L L +A N+ S+ LA L L +L HN ++ L + R L L L N
Sbjct: 146 LDALGYLDLAENRLRSLPARLLANLGALHTLDLGHNLLESLPEGFLRGPRRLQRLHLEGN 205
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTP 124
R+ + LA L L L+ N L A+ D LK L L L +N +S P
Sbjct: 206 RLQRLEAGLLAPQPFLGVLFLNDNQLTAVAADSFRGLKQLDMLDLSNNSLSSTPP 260
Score = 112 (44.5 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 36/118 (30%), Positives = 49/118 (41%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
R ++L L + NQ L GLD L L N++ L L L LDL
Sbjct: 120 RSSAALNTLVLRENQLQEASARWLQGLDALGYLDLAENRLRSLPARLLANLGALHTLDLG 179
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
HN + ++ L L L L N L+ L L+ P L L L+DN ++ V D
Sbjct: 180 HNLLESLPEGFLRGPRRLQRLHLEGNRLQRLEAGLLAPQPFLGVLFLNDNQLTAVAAD 237
Score = 104 (41.7 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 33/105 (31%), Positives = 50/105 (47%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
L+ L ++ N+ + G LA + +L L N + L FR+ + L+ L L N++
Sbjct: 77 LQELHLSSNRLQELSPGLLAPVPRLRVLDLTRNALRSLPPGLFRSSAALNTLVLRENQLQ 136
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
S L L L LDL+ N LR+L L+ L +L L L N
Sbjct: 137 EASARWLQGLDALGYLDLAENRLRSLPARLLANLGALHTLDLGHN 181
>UNIPROTKB|Q14392 [details] [associations]
symbol:LRRC32 "Leucine-rich repeat-containing protein 32"
species:9606 "Homo sapiens" [GO:0010628 "positive regulation of
gene expression" evidence=IEA] [GO:0046007 "negative regulation of
activated T cell proliferation" evidence=IEA] [GO:0050710 "negative
regulation of cytokine secretion" evidence=IEA] [GO:0005887
"integral to plasma membrane" evidence=TAS] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005887 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GO:GO:0010628 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0046007 GO:GO:0050710 EMBL:Z24680
EMBL:BC052210 EMBL:BC070079 IPI:IPI00030280 PIR:S42799
RefSeq:NP_001122394.1 RefSeq:NP_005503.1 UniGene:Hs.151641
ProteinModelPortal:Q14392 SMR:Q14392 DIP:DIP-48932N STRING:Q14392
PhosphoSite:Q14392 DMDM:2498405 PaxDb:Q14392 PRIDE:Q14392
Ensembl:ENST00000260061 Ensembl:ENST00000404995
Ensembl:ENST00000407242 GeneID:2615 KEGG:hsa:2615 UCSC:uc001oxq.4
CTD:2615 GeneCards:GC11M076368 H-InvDB:HIX0036396 HGNC:HGNC:4161
MIM:137207 neXtProt:NX_Q14392 PharmGKB:PA28574 HOGENOM:HOG000113368
HOVERGEN:HBG052348 InParanoid:Q14392 OMA:CCGNGWL OrthoDB:EOG4DBTF0
PhylomeDB:Q14392 ChiTaRS:LRRC32 GenomeRNAi:2615 NextBio:10297
ArrayExpress:Q14392 Bgee:Q14392 CleanEx:HS_LRRC32
Genevestigator:Q14392 GermOnline:ENSG00000137507 Uniprot:Q14392
Length = 662
Score = 151 (58.2 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 43/129 (33%), Positives = 64/129 (49%)
Query: 14 KVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV- 72
+ L ++ NQ S+ L L L N+I L+ +F+AL+ L HL LAHNR+
Sbjct: 52 ETLDLSGNQLRSILASPLGFYTALRHLDLSTNEISFLQPGAFQALTHLEHLSLAHNRLAM 111
Query: 73 --AVSGASLAHLSNLTTLDLSHNFLRA-LTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
A+S L L +T+LDLS N L + L + L+ SL L L +N ++ +T D
Sbjct: 112 ATALSAGGLGPLPRVTSLDLSGNSLYSGLLERLLGEAPSLHTLSLAENSLTRLTRHTFRD 171
Query: 130 NVTITTLTL 138
+ L L
Sbjct: 172 MPALEQLDL 180
Score = 122 (48.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 37/116 (31%), Positives = 54/116 (46%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
SL LS+A N + + R + L L H N + +ED +F L L+HL+L+ N +
Sbjct: 150 SLHTLSLAENSLTRLTRHTFRDMPALEQLDLHSNVLMDIEDGAFEGLPRLTHLNLSRNSL 209
Query: 72 VAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVT-PDV 126
+S SL L LDLS N + A Q P Q LD + ++ PD+
Sbjct: 210 TCISDFSL---QQLRVLDLSCNSIEAF-QTASQPQAEFQLTWLDLRENKLLHFPDL 261
Score = 111 (44.1 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 37/113 (32%), Positives = 51/113 (45%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
R LS L L +++N+ + L L L L+ N + E +L L LDL+
Sbjct: 312 RPLSQLLNLDLSYNEIELIPDSFLEHLTSLCFLNLSRNCLRTFEARRLGSLPCLMLLDLS 371
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
HN + + + A L +L TL L N LR L L SLQ L L N +S
Sbjct: 372 HNALETLELGARA-LGSLRTLLLQGNALRDLPPYTFANLASLQRLNLQGNRVS 423
Score = 108 (43.1 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 32/107 (29%), Positives = 50/107 (46%)
Query: 34 LDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHN 93
L +L +L +N+I+++ D L++L L+L+ N + L L L LDLSHN
Sbjct: 314 LSQLLNLDLSYNEIELIPDSFLEHLTSLCFLNLSRNCLRTFEARRLGSLPCLMLLDLSHN 373
Query: 94 FLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTLTLSG 140
L L L SL+ L L N + + P + ++ L L G
Sbjct: 374 ALETLELGA-RALGSLRTLLLQGNALRDLPPYTFANLASLQRLNLQG 419
Score = 105 (42.0 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 40/119 (33%), Positives = 53/119 (44%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T R + +L+ L + N + GA GL +LT L+ N + + D S + L L D
Sbjct: 168 TFRDMPALEQLDLHSNVLMDIEDGAFEGLPRLTHLNLSRNSLTCISDFSLQQLRVL---D 224
Query: 66 LAHNRIVAVSGASLAHLS-NLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVT 123
L+ N I A AS LT LDL N L DL L L L L +N I + T
Sbjct: 225 LSCNSIEAFQTASQPQAEFQLTWLDLRENKLLHFP-DLAA-LPRLIYLNLSNNLIRLPT 281
Score = 101 (40.6 bits), Expect = 0.00092, P = 0.00092
Identities = 36/133 (27%), Positives = 62/133 (46%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTL---SHLDLA 67
++L+ L ++ N+ S ++ GA L L LS HN++ + S L L + LDL+
Sbjct: 73 TALRHLDLSTNEISFLQPGAFQALTHLEHLSLAHNRLAMATALSAGGLGPLPRVTSLDLS 132
Query: 68 HNRIVA-VSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDV 126
N + + + L +L TL L+ N L LT+ + +L++L L N + +
Sbjct: 133 GNSLYSGLLERLLGEAPSLHTLSLAENSLTRLTRHTFRDMPALEQLDLHSNVLMDIEDGA 192
Query: 127 IGDNVTITTLTLS 139
+T L LS
Sbjct: 193 FEGLPRLTHLNLS 205
>WB|WBGene00010621 [details] [associations]
symbol:egg-6 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0048477
"oogenesis" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR001611 InterPro:IPR027202 PROSITE:PS51450 GO:GO:0009792
GO:GO:0040010 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
GO:GO:0040011 GO:GO:0048477 GO:GO:0040015 EMBL:Z81098
GeneTree:ENSGT00700000104286 PANTHER:PTHR24371:SF0 HSSP:P12830
EMBL:JQ292908 PIR:T23395 RefSeq:NP_492348.1
ProteinModelPortal:P90920 SMR:P90920 DIP:DIP-24762N
MINT:MINT-1081293 STRING:P90920 EnsemblMetazoa:K07A12.2
GeneID:172670 KEGG:cel:CELE_K07A12.2 UCSC:K07A12.2 CTD:172670
WormBase:K07A12.2 HOGENOM:HOG000020436 InParanoid:P90920
OMA:INNFELM NextBio:876503 Uniprot:P90920
Length = 961
Score = 153 (58.9 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 34/109 (31%), Positives = 57/109 (52%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
+L+++S+ +N + R + LDKL L +N + +E F + L L + +N +
Sbjct: 318 NLQLISVQNNNIVQISRNSFESLDKLVVLLVGNNSLAKIERGMFDGMKNLQQLSIRNNTL 377
Query: 72 VAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
A+ +S A L++LTTLDL HN + + + L L L L +N IS
Sbjct: 378 TALDASSFAQLAHLTTLDLGHNKIHDIEEGTFDKLSKLFWLDLSNNKIS 426
Score = 145 (56.1 bits), Expect = 7.3e-09, P = 7.3e-09
Identities = 35/110 (31%), Positives = 54/110 (49%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L VL + +N + + RG G+ L LS +N + L+ SF L+ L+ LDL HN
Sbjct: 340 LDKLVVLLVGNNSLAKIERGMFDGMKNLQQLSIRNNTLTALDASSFAQLAHLTTLDLGHN 399
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
+I + + LS L LDLS+N + + K + + LD N +
Sbjct: 400 KIHDIEEGTFDKLSKLFWLDLSNNKISGFKTSVFK--KKISNILLDGNQL 447
Score = 122 (48.0 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 36/116 (31%), Positives = 59/116 (50%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRAL-STLSHLDLAH 68
LS+L +++ NQ SS+ A GL LT L +N I S A+ ++L LD++
Sbjct: 125 LSTLMSMNLNSNQISSIPDKAFNGLSALTQLRLENNAICDFPPKSLDAVKASLVLLDVSG 184
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTP 124
N + A+ L + +NL LDL N + + + L L+ELR+ +N + + P
Sbjct: 185 NCLDAIPAQILRNAANLMYLDLGSNNISEINNFELMNLPFLRELRVQNNTLRRIHP 240
Score = 117 (46.2 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 34/132 (25%), Positives = 61/132 (46%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
+R ++L L + N S + L L L L +N + + +F + L +L L
Sbjct: 195 LRNAANLMYLDLGSNNISEINNFELMNLPFLRELRVQNNTLRRIHPMAFMNVPQLQYLYL 254
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDV 126
N I + G L NL LD+S+N L AL + L +L+++R+D N I+ +
Sbjct: 255 QDNIISTLDGNRLQGFKNLEVLDVSNNALYALPS--LKDLPNLKQVRVDGNLITKIETLA 312
Query: 127 IGDNVTITTLTL 138
+N + +++
Sbjct: 313 FSNNPNLQLISV 324
Score = 103 (41.3 bits), Expect = 0.00022, P = 0.00022
Identities = 31/127 (24%), Positives = 60/127 (47%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
+L+VL +++N ++ +L L L + N I +E +F L + + +N I
Sbjct: 272 NLEVLDVSNNALYALP--SLKDLPNLKQVRVDGNLITKIETLAFSNNPNLQLISVQNNNI 329
Query: 72 VAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNV 131
V +S S L L L + +N L + + + +K+LQ+L + +N ++ +
Sbjct: 330 VQISRNSFESLDKLVVLLVGNNSLAKIERGMFDGMKNLQQLSIRNNTLTALDASSFAQLA 389
Query: 132 TITTLTL 138
+TTL L
Sbjct: 390 HLTTLDL 396
>MGI|MGI:3609246 [details] [associations]
symbol:Lingo3 "leucine rich repeat and Ig domain containing
3" species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:3609246 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 eggNOG:NOG278536 GeneTree:ENSGT00690000101682
HOGENOM:HOG000246971 HSSP:Q05793 HOVERGEN:HBG057546 CTD:645191
OMA:EIDNWPL OrthoDB:EOG4THVSV EMBL:AC166937 EMBL:BC072620
IPI:IPI00131641 RefSeq:NP_001013780.2 UniGene:Mm.40213
ProteinModelPortal:Q6GQU6 SMR:Q6GQU6 PhosphoSite:Q6GQU6
PRIDE:Q6GQU6 Ensembl:ENSMUST00000053986 GeneID:237403
KEGG:mmu:237403 UCSC:uc007gey.2 InParanoid:Q6GQU6 NextBio:383344
Bgee:Q6GQU6 Genevestigator:Q6GQU6 Uniprot:Q6GQU6
Length = 589
Score = 150 (57.9 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 40/125 (32%), Positives = 60/125 (48%)
Query: 14 KVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVA 73
++L ++ N+ + G LA L L L +HN I +E +F L L L L N++
Sbjct: 56 RMLELSRNRIRCLNPGDLASLPTLEELDLNHNVIAHVEPGAFANLPRLRVLRLRGNQLKL 115
Query: 74 VSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTI 133
+ HL +LT LDLS N L L L+SLQ L + DND+ ++ + +
Sbjct: 116 IPPGVFTHLDSLTLLDLSENKLVILLDFSFQDLRSLQRLEVGDNDLVFISRRAFAGLLGL 175
Query: 134 TTLTL 138
LTL
Sbjct: 176 AELTL 180
Score = 137 (53.3 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 35/119 (29%), Positives = 63/119 (52%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L +L+ L + HN + V GA A L +L L NQ+ ++ F L +L+ LDL+ N
Sbjct: 76 LPTLEELDLNHNVIAHVEPGAFANLPRLRVLRLRGNQLKLIPPGVFTHLDSLTLLDLSEN 135
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
++V + S L +L L++ N L +++ L L EL L+ +++ ++P+ +G
Sbjct: 136 KLVILLDFSFQDLRSLQRLEVGDNDLVFISRRAFAGLLGLAELTLERCNLTSLSPESLG 194
Score = 130 (50.8 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 35/105 (33%), Positives = 53/105 (50%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L+VL + NQ + G LD LT L N++ +L D SF+ L +L L++ N
Sbjct: 100 LPRLRVLRLRGNQLKLIPPGVFTHLDSLTLLDLSENKLVILLDFSFQDLRSLQRLEVGDN 159
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRL 114
+V +S + A L L L L L +L+ + + L+ L LRL
Sbjct: 160 DLVFISRRAFAGLLGLAELTLERCNLTSLSPESLGHLRGLGALRL 204
Score = 129 (50.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 34/109 (31%), Positives = 53/109 (48%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
+L LSI H ++V AL LT L+ HN I ++ SFR L L L LA +
Sbjct: 246 NLTSLSITHTNITAVPAAALRQQAHLTCLNLSHNPISMVPRGSFRDLVRLRELHLAGALL 305
Query: 72 VAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
+ + L + L+LS N L L ++ + +L+ LR+D N ++
Sbjct: 306 AVIEPQAFVGLRQIRLLNLSDNLLSTLEENTFHSVNTLETLRVDGNPLA 354
Score = 121 (47.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 42/132 (31%), Positives = 64/132 (48%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L L++ +S+ +L L L +L H I LED +F+ L LSHL++ +
Sbjct: 172 LLGLAELTLERCNLTSLSPESLGHLRGLGALRLRHLAIAALEDQNFQKLPGLSHLEIDNW 231
Query: 70 RIVA-VSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
++ V+ SL L NLT+L ++H + A+ + L L L N ISMV
Sbjct: 232 PLLEEVAPGSLRGL-NLTSLSITHTNITAVPAAALRQQAHLTCLNLSHNPISMVPRGSFR 290
Query: 129 DNVTITTLTLSG 140
D V + L L+G
Sbjct: 291 DLVRLRELHLAG 302
Score = 117 (46.2 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 40/134 (29%), Positives = 61/134 (45%)
Query: 8 RRLSSLKVLSIAH-NQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
++L L L I + V G+L GL+ LTSLS H I + + R + L+ L+L
Sbjct: 218 QKLPGLSHLEIDNWPLLEEVAPGSLRGLN-LTSLSITHTNITAVPAAALRQQAHLTCLNL 276
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDV 126
+HN I V S L L L L+ L + L+ ++ L L DN +S + +
Sbjct: 277 SHNPISMVPRGSFRDLVRLRELHLAGALLAVIEPQAFVGLRQIRLLNLSDNLLSTLEENT 336
Query: 127 IGDNVTITTLTLSG 140
T+ TL + G
Sbjct: 337 FHSVNTLETLRVDG 350
Score = 103 (41.3 bits), Expect = 0.00012, P = 0.00012
Identities = 26/76 (34%), Positives = 39/76 (51%)
Query: 64 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVT 123
L+L+ NRI ++ LA L L LDL+HN + + L L+ LRL N + ++
Sbjct: 58 LELSRNRIRCLNPGDLASLPTLEELDLNHNVIAHVEPGAFANLPRLRVLRLRGNQLKLIP 117
Query: 124 PDVIGDNVTITTLTLS 139
P V ++T L LS
Sbjct: 118 PGVFTHLDSLTLLDLS 133
>ZFIN|ZDB-GENE-030722-3 [details] [associations]
symbol:slit1a "slit homolog 1a (Drosophila)"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007411 "axon guidance" evidence=NAS] [GO:0005576
"extracellular region" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IMP] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152
ZFIN:ZDB-GENE-030722-3 GO:GO:0007411 GO:GO:0005576
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 GO:GO:0045773 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 Pfam:PF12661
GO:GO:0051964 Pfam:PF01463 HOVERGEN:HBG057959 KO:K06838
EMBL:DQ177286 IPI:IPI00506990 RefSeq:NP_001030140.1
UniGene:Dr.88478 ProteinModelPortal:Q3S2J2 SMR:Q3S2J2 STRING:Q3S2J2
GeneID:556123 KEGG:dre:556123 CTD:556123 NextBio:20881326
Uniprot:Q3S2J2
Length = 1524
Score = 137 (53.3 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 33/113 (29%), Positives = 58/113 (51%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L+VL + NQ +V RGA + +L L + NQ+ L + F+ + LS LDL+ N
Sbjct: 77 LKYLRVLQLMENQIVTVERGAFDEMRELERLRLNRNQLHQLPELLFQKNAALSRLDLSEN 136
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
I A+ + +++ L L N + + ++ L+ L L++N+IS +
Sbjct: 137 FIQAIPRKAFRGATDIKNLQLDKNHISCIEDGAFRAMRGLEVLTLNNNNISSI 189
Score = 131 (51.2 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 33/107 (30%), Positives = 50/107 (46%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
+ L+ LK +++++N+ S + GA G + L NQ+D+ FR L L L L
Sbjct: 555 KTLTHLKKINLSNNKISEIEDGAFEGASSVNELHLTANQLDLAHSGMFRGLEGLRMLMLR 614
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRL 114
+NRI + S L N+ L L N L + L+SL L L
Sbjct: 615 NNRISCIHNNSFTGLHNVRLLSLYDNTLTTIAPGAFDTLQSLSTLNL 661
Score = 130 (50.8 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 35/104 (33%), Positives = 60/104 (57%)
Query: 37 LTSLSCHHNQIDVL--EDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNF 94
+T L NQ+ + E SF++L + DL++NRI +++ +S ++S LTTL LS+N
Sbjct: 756 ITELYLDGNQLSTVPKELSSFKSLQLV---DLSNNRISSLTNSSFTNMSQLTTLILSYNA 812
Query: 95 LRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTLTL 138
LR + + L+SL+ L L NDIS + + D +++ L +
Sbjct: 813 LRCIPTLAFSGLRSLRLLSLHGNDISELPDGIFSDAQSLSHLAI 856
Score = 112 (44.5 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 32/105 (30%), Positives = 51/105 (48%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
L+ + +++NQ S + A GL L SL + N+I L F L L L L N+I
Sbjct: 328 LRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITDLPRGVFDGLHALQLLLLNANKIH 387
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
+ + L NL+ L L N ++ L + + L+++Q L L N
Sbjct: 388 CLRANTFQDLQNLSLLSLYDNKIQTLAKGTFSSLRAIQTLHLAQN 432
Score = 112 (44.5 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 29/120 (24%), Positives = 58/120 (48%)
Query: 20 HNQFSSVRR-GALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGAS 78
+N+ +++ GA L L ++ +N+I +ED +F S+++ L L N++
Sbjct: 542 NNEITTIEAMGAFKTLTHLKKINLSNNKISEIEDGAFEGASSVNELHLTANQLDLAHSGM 601
Query: 79 LAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTLTL 138
L L L L +N + + + T L +++ L L DN ++ + P +++TL L
Sbjct: 602 FRGLEGLRMLMLRNNRISCIHNNSFTGLHNVRLLSLYDNTLTTIAPGAFDTLQSLSTLNL 661
Score = 112 (44.5 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 33/124 (26%), Positives = 54/124 (43%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
L + N + + R GL L L NQI +E +F + L L L N++ +
Sbjct: 59 LELNGNNLTRINRNDFTGLKYLRVLQLMENQIVTVERGAFDEMRELERLRLNRNQLHQLP 118
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITT 135
+ L+ LDLS NF++A+ + ++ L+LD N IS + +
Sbjct: 119 ELLFQKNAALSRLDLSENFIQAIPRKAFRGATDIKNLQLDKNHISCIEDGAFRAMRGLEV 178
Query: 136 LTLS 139
LTL+
Sbjct: 179 LTLN 182
Score = 106 (42.4 bits), Expect = 0.00018, P = 0.00018
Identities = 35/128 (27%), Positives = 55/128 (42%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
S+ + + N S+ GA + KL + +NQI L +F+ L +L+ L L N+I
Sbjct: 303 SMTEIRLEQNSIKSIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKI 362
Query: 72 VAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNV 131
+ L L L L+ N + L + L++L L L DN I +
Sbjct: 363 TDLPRGVFDGLHALQLLLLNANKIHCLRANTFQDLQNLSLLSLYDNKIQTLAKGTFSSLR 422
Query: 132 TITTLTLS 139
I TL L+
Sbjct: 423 AIQTLHLA 430
Score = 104 (41.7 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 26/85 (30%), Positives = 42/85 (49%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
++L L ++ N ++ R A G + +L N I +ED +FRA+ L L L +N
Sbjct: 126 AALSRLDLSENFIQAIPRKAFRGATDIKNLQLDKNHISCIEDGAFRAMRGLEVLTLNNNN 185
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFL 95
I ++ +S H+ L T L N L
Sbjct: 186 ISSIPVSSFNHMPKLRTFRLHSNNL 210
Score = 73 (30.8 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 84 NLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTLTLSG 140
++T + L N ++++ +P K L+ + L +N IS + PD ++ +L L G
Sbjct: 303 SMTEIRLEQNSIKSIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYG 359
Score = 52 (23.4 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 47
R + L+VL++ +N SS+ + + KL + H N +
Sbjct: 171 RAMRGLEVLTLNNNNISSIPVSSFNHMPKLRTFRLHSNNL 210
>FB|FBgn0085397 [details] [associations]
symbol:Fili "Fish-lips" species:7227 "Drosophila
melanogaster" [GO:0003674 "molecular_function" evidence=ND]
[GO:0042981 "regulation of apoptotic process" evidence=IMP]
[GO:0016021 "integral to membrane" evidence=ISM] [GO:0007476
"imaginal disc-derived wing morphogenesis" evidence=IMP]
InterPro:IPR001611 PROSITE:PS51450 EMBL:AE013599 GO:GO:0016021
GO:GO:0042981 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
GO:GO:0007476 GeneTree:ENSGT00700000104286 EMBL:BT015985
RefSeq:NP_001097402.1 UniGene:Dm.32432 SMR:Q5U1A7 STRING:Q5U1A7
EnsemblMetazoa:FBtr0112593 EnsemblMetazoa:FBtr0330338
GeneID:5740472 KEGG:dme:Dmel_CG34368 UCSC:CG34368-RC CTD:5740472
FlyBase:FBgn0085397 InParanoid:Q5U1A7 OMA:KEADDEP OrthoDB:EOG4H9W1T
GenomeRNAi:5740472 NextBio:20891510 Uniprot:Q5U1A7
Length = 738
Score = 151 (58.2 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 40/130 (30%), Positives = 68/130 (52%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L++L +L ++ N+ +V AL+ L L L +N I LED+ F+ ++TL L +N
Sbjct: 143 LTNLLLLDLSFNRIETVHPTALSDLASLVELDLTNNNIVSLEDNCFKGMNTLEVLVFRNN 202
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
R++ V ++L HL L +LD+S N + + D LK L L + N +S +
Sbjct: 203 RLLDVPASNLWHLHALKSLDMSLNLVEFVRNDSFEGLKELLALSVQGNVMSELDLSAFEG 262
Query: 130 NVTITTLTLS 139
+++ L LS
Sbjct: 263 LISLKHLDLS 272
Score = 147 (56.8 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 44/131 (33%), Positives = 63/131 (48%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L +LK L ++ N VR + GL +L +LS N + L+ +F L +L HLDL+ N
Sbjct: 215 LHALKSLDMSLNLVEFVRNDSFEGLKELLALSVQGNVMSELDLSAFEGLISLKHLDLSDN 274
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDND-ISMVTPDVIG 128
+ V L+ LSNLT L+L N L L L+EL L D + +
Sbjct: 275 NLTMVPTQQLSKLSNLTYLNLGGNRFSQLPAVAFLNLFHLRELHLSRLDFLQRIDSRAFV 334
Query: 129 DNVTITTLTLS 139
DN + TL L+
Sbjct: 335 DNTHLQTLHLN 345
Score = 118 (46.6 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 29/105 (27%), Positives = 56/105 (53%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
L++L ++ N ++ +L +L+ N + L H+F+ L+ L LDL+ NRI
Sbjct: 98 LEILDLSQNIIETLGSKNFEYQSELRTLNLSRNLVSSLHKHAFKGLTNLLLLDLSFNRIE 157
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
V +L+ L++L LDL++N + +L + + +L+ L +N
Sbjct: 158 TVHPTALSDLASLVELDLTNNNIVSLEDNCFKGMNTLEVLVFRNN 202
Score = 114 (45.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 37/132 (28%), Positives = 59/132 (44%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI-DVLEDHSFRALSTLSHLDLAH 68
L+SL L + +N S+ G++ L L +N++ DV + + L L LD++
Sbjct: 167 LASLVELDLTNNNIVSLEDNCFKGMNTLEVLVFRNNRLLDVPASNLWH-LHALKSLDMSL 225
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
N + V S L L L + N + L L SL+ L L DN+++MV +
Sbjct: 226 NLVEFVRNDSFEGLKELLALSVQGNVMSELDLSAFEGLISLKHLDLSDNNLTMVPTQQLS 285
Query: 129 DNVTITTLTLSG 140
+T L L G
Sbjct: 286 KLSNLTYLNLGG 297
Score = 112 (44.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 33/130 (25%), Positives = 60/130 (46%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
S L+ L+++ N SS+ + A GL L L N+I+ + + L++L LDL +N
Sbjct: 120 SELRTLNLSRNLVSSLHKHAFKGLTNLLLLDLSFNRIETVHPTALSDLASLVELDLTNNN 179
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDN 130
IV++ ++ L L +N L + + L +L+ L + N + V D
Sbjct: 180 IVSLEDNCFKGMNTLEVLVFRNNRLLDVPASNLWHLHALKSLDMSLNLVEFVRNDSFEGL 239
Query: 131 VTITTLTLSG 140
+ L++ G
Sbjct: 240 KELLALSVQG 249
>FB|FBgn0028888 [details] [associations]
symbol:CG4168 species:7227 "Drosophila melanogaster"
[GO:0004930 "G-protein coupled receptor activity" evidence=ISS]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 EMBL:AE014134
InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
HSSP:Q9BZR6 FlyBase:FBgn0028888 RefSeq:NP_609740.4
ProteinModelPortal:Q9VJQ0 SMR:Q9VJQ0 IntAct:Q9VJQ0 MINT:MINT-294601
GeneID:34889 KEGG:dme:Dmel_CG4168 UCSC:CG4168-RA InParanoid:Q9VJQ0
PhylomeDB:Q9VJQ0 GenomeRNAi:34889 NextBio:790724
ArrayExpress:Q9VJQ0 Bgee:Q9VJQ0 Uniprot:Q9VJQ0
Length = 1443
Score = 154 (59.3 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 38/130 (29%), Positives = 72/130 (55%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
++L+ L++AHNQ S++ A L+ L L+ HN + L SF+ L++L LDL+HN+
Sbjct: 896 NTLRFLNLAHNQLGSLQSHAFGDLEFLEILNVAHNNLTSLRRRSFQGLNSLQELDLSHNQ 955
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD- 129
+ + ++L L L ++ N LRAL +++ + L+ L + +N +S+ D
Sbjct: 956 LDQLQVEQFSNLRKLRILRINSNRLRALPREVFMNTR-LEFLDIAENQLSVWPVPAFTDI 1014
Query: 130 NVTITTLTLS 139
T+ ++ +S
Sbjct: 1015 GFTLRSIQMS 1024
Score = 128 (50.1 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 33/111 (29%), Positives = 58/111 (52%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L++L++AHN +S+RR + GL+ L L HNQ+D L+ F L L L + N
Sbjct: 919 LEFLEILNVAHNNLTSLRRRSFQGLNSLQELDLSHNQLDQLQVEQFSNLRKLRILRINSN 978
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLK-SLQELRLDDNDI 119
R+ A+ + + L LD++ N L T + +L+ +++ N++
Sbjct: 979 RLRALPREVFMN-TRLEFLDIAENQLSVWPVPAFTDIGFTLRSIQMSHNNL 1028
Score = 126 (49.4 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 32/118 (27%), Positives = 63/118 (53%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T L L+ L++ N+ ++ R A L+ L L +N++ + +F L L+ LD
Sbjct: 770 TFHSLGDLQTLNLQSNRLRTIARHAFHNLEFLRYLDLSYNRLVNISHGAFTVLPNLAALD 829
Query: 66 LAHNRIVAVSGASLAHLSNLTT---LDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
L HN++ ++S S ++SN TT L++SHN + + +L + + + +L + N ++
Sbjct: 830 LMHNQLCSLSLKSFLYVSNTTTPLRLNVSHNHIASFYDELSSYMY-IYQLDISHNHVT 886
Score = 123 (48.4 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 28/89 (31%), Positives = 47/89 (52%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
S L + +++N + L L +L+ N++ + H+F L L +LDL++NR
Sbjct: 751 SHLVEIDLSYNGLERLEAQTFHSLGDLQTLNLQSNRLRTIARHAFHNLEFLRYLDLSYNR 810
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALT 99
+V +S + L NL LDL HN L +L+
Sbjct: 811 LVNISHGAFTVLPNLAALDLMHNQLCSLS 839
Score = 105 (42.0 bits), Expect = 0.00021, P = 0.00021
Identities = 34/114 (29%), Positives = 53/114 (46%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLD-KLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
L+ L IA NQ S A + L S+ HN ++ L+ F L + LA NRI
Sbjct: 993 LEFLDIAENQLSVWPVPAFTDIGFTLRSIQMSHNNLEYLDASMFINSQFLYDISLARNRI 1052
Query: 72 VAVSGASLAHLSNLTTLDLSHNFLRALT-QDLITPLKSLQELRLDDNDISMVTP 124
+ + + L+NLT LDLS N L +++ L++L L + ++ P
Sbjct: 1053 TILPDNTFSFLNNLTNLDLSQNPLVTTNLREVFVHTPRLRKLSLHHMGLYVLPP 1106
Score = 104 (41.7 bits), Expect = 0.00027, P = 0.00027
Identities = 30/115 (26%), Positives = 58/115 (50%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALS-TLSHLDLAHN 69
SS++ + +++ SV GL +L +L N++ + + SF ++ +L LD++ N
Sbjct: 210 SSVRYIEMSNTHLQSVDDETFQGL-RLKTLKLIDNELQDISERSFSTMTHSLMTLDISGN 268
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTP 124
++ + +L L +L+ L N + L + +L+ L L DNDI+ V P
Sbjct: 269 KMQHLPLDALQRLHSLSRLVAQRNHITTLDGNWDAQHDTLRSLHLSDNDITEVAP 323
Score = 104 (41.7 bits), Expect = 0.00027, P = 0.00027
Identities = 33/131 (25%), Positives = 61/131 (46%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L+SL+ L ++HNQ ++ + L KL L + N++ L F + L LD+A N
Sbjct: 943 LNSLQELDLSHNQLDQLQVEQFSNLRKLRILRINSNRLRALPREVFMN-TRLEFLDIAEN 1001
Query: 70 RIVAVSGASLAHLS-NLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
++ + + L ++ +SHN L L + + L ++ L N I+++ +
Sbjct: 1002 QLSVWPVPAFTDIGFTLRSIQMSHNNLEYLDASMFINSQFLYDISLARNRITILPDNTFS 1061
Query: 129 DNVTITTLTLS 139
+T L LS
Sbjct: 1062 FLNNLTNLDLS 1072
>MGI|MGI:1916925 [details] [associations]
symbol:Pxdn "peroxidasin homolog (Drosophila)" species:10090
"Mus musculus" [GO:0004601 "peroxidase activity" evidence=ISO]
[GO:0005201 "extracellular matrix structural constituent"
evidence=ISO] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0005615 "extracellular space" evidence=ISO] [GO:0005783
"endoplasmic reticulum" evidence=ISO] [GO:0006979 "response to
oxidative stress" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0020037 "heme binding" evidence=ISO]
[GO:0030198 "extracellular matrix organization" evidence=ISO;IDA]
[GO:0031012 "extracellular matrix" evidence=ISO;IDA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA;ISO] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR001007 InterPro:IPR002007 InterPro:IPR007110
InterPro:IPR010255 InterPro:IPR019791 Pfam:PF00093 Pfam:PF03098
PRINTS:PR00457 PROSITE:PS00436 PROSITE:PS01208 PROSITE:PS50184
PROSITE:PS50292 PROSITE:PS50835 PROSITE:PS51450 SMART:SM00214
MGI:MGI:1916925 GO:GO:0005783 GO:GO:0005615 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 GO:GO:0005578 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0030198 GO:GO:0020037 GO:GO:0031012
GO:GO:0004601 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0042744 SUPFAM:SSF48113 PROSITE:PS00435
HSSP:P21809 GO:GO:0005201 Gene3D:1.10.640.10 eggNOG:NOG262194
GeneTree:ENSGT00550000074325 HOGENOM:HOG000016084
HOVERGEN:HBG108312 CTD:7837 OMA:EPVITWN OrthoDB:EOG4J1179
EMBL:AK142872 EMBL:AC159626 EMBL:AC165078 EMBL:BC112913
IPI:IPI00461384 RefSeq:NP_852060.2 UniGene:Mm.251774
ProteinModelPortal:Q3UQ28 SMR:Q3UQ28 PhosphoSite:Q3UQ28
PaxDb:Q3UQ28 PRIDE:Q3UQ28 Ensembl:ENSMUST00000122328 GeneID:69675
KEGG:mmu:69675 UCSC:uc007ngl.2 InParanoid:Q3UQ28 NextBio:330062
Bgee:Q3UQ28 CleanEx:MM_PXDN Genevestigator:Q3UQ28 Uniprot:Q3UQ28
Length = 1475
Score = 154 (59.3 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 37/110 (33%), Positives = 57/110 (51%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
RRL SL L + +NQ + GA L+ L L + N+I ++ +F+ L++L L L
Sbjct: 80 RRLRSLNTLLLNNNQIKKIPNGAFEDLENLKYLYLYKNEIQSIDRQAFKGLASLEQLYLH 139
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
N+I + S HL L L L +N + L + L+S++ LRLD N
Sbjct: 140 FNQIETLDPESFQHLPKLERLFLHNNRITHLVPGTFSQLESMKRLRLDSN 189
Score = 123 (48.4 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 31/86 (36%), Positives = 44/86 (51%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L +LK L + N+ S+ R A GL L L H NQI+ L+ SF+ L L L L +N
Sbjct: 106 LENLKYLYLYKNEIQSIDRQAFKGLASLEQLYLHFNQIETLDPESFQHLPKLERLFLHNN 165
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFL 95
RI + + + L ++ L L N L
Sbjct: 166 RITHLVPGTFSQLESMKRLRLDSNAL 191
Score = 113 (44.8 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 32/124 (25%), Positives = 57/124 (45%)
Query: 15 VLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAV 74
+L + N+ ++ GA L L +L ++NQI + + +F L L +L L N I ++
Sbjct: 63 ILDLRFNRIREIQPGAFRRLRSLNTLLLNNNQIKKIPNGAFEDLENLKYLYLYKNEIQSI 122
Query: 75 SGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTIT 134
+ L++L L L N + L + L L+ L L +N I+ + P ++
Sbjct: 123 DRQAFKGLASLEQLYLHFNQIETLDPESFQHLPKLERLFLHNNRITHLVPGTFSQLESMK 182
Query: 135 TLTL 138
L L
Sbjct: 183 RLRL 186
>MGI|MGI:1919006 [details] [associations]
symbol:Cpn2 "carboxypeptidase N, polypeptide 2"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 MGI:MGI:1919006 GO:GO:0005576 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
CTD:1370 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 HOGENOM:HOG000294123
HOVERGEN:HBG050814 KO:K13023 OMA:WQCDCHL OrthoDB:EOG4WM4TF
EMBL:AK005049 EMBL:BC025836 EMBL:BC138287 EMBL:BC138288
IPI:IPI00119522 RefSeq:NP_082180.2 UniGene:Mm.290614
ProteinModelPortal:Q9DBB9 SMR:Q9DBB9 STRING:Q9DBB9 PaxDb:Q9DBB9
PRIDE:Q9DBB9 Ensembl:ENSMUST00000064856 GeneID:71756 KEGG:mmu:71756
UCSC:uc007ywm.1 GeneTree:ENSGT00700000104286 InParanoid:B2RR89
NextBio:334421 Bgee:Q9DBB9 CleanEx:MM_CPN2 Genevestigator:Q9DBB9
GermOnline:ENSMUSG00000023176 Uniprot:Q9DBB9
Length = 547
Score = 148 (57.2 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 38/131 (29%), Positives = 66/131 (50%)
Query: 9 RLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 68
+L SL++L + HN + + L LT LS N + L + F L HL L++
Sbjct: 239 QLFSLEMLWLQHNAICHLPVSLFSSLHNLTFLSLKDNALRTLPEGLFAHNQGLLHLSLSY 298
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
N++ + + +LS L +L LSHN + L + + L+ L +L LD N+++ + P +
Sbjct: 299 NQLETIPEGAFTNLSRLVSLTLSHNAITDLPEHVFRNLEQLVKLSLDSNNLTALHPALFH 358
Query: 129 DNVTITTLTLS 139
+ + L LS
Sbjct: 359 NLSRLQLLNLS 369
Score = 147 (56.8 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 40/129 (31%), Positives = 65/129 (50%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
LSSL+ L++ ++ + + +D L SL NQ+ L F++L L L+LA N
Sbjct: 120 LSSLEKLTLDFDRLAGLPEDLFCHMDILESLQLQGNQLRTLPGRLFQSLRDLRTLNLAQN 179
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+ + + L+ L L LS+N L L + + L SLQEL LD N I+ ++P +
Sbjct: 180 LLTQLPKGAFQSLTGLQMLKLSNNMLARLPEGALGSLSSLQELFLDGNAITELSPHLFSQ 239
Query: 130 NVTITTLTL 138
++ L L
Sbjct: 240 LFSLEMLWL 248
Score = 147 (56.8 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 43/131 (32%), Positives = 64/131 (48%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L+ L++L +++N + + GAL L L L N I L H F L +L L L HN
Sbjct: 192 LTGLQMLKLSNNMLARLPEGALGSLSSLQELFLDGNAITELSPHLFSQLFSLEMLWLQHN 251
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
I + + + L NLT L L N LR L + L + L L L N + + P+
Sbjct: 252 AICHLPVSLFSSLHNLTFLSLKDNALRTLPEGLFAHNQGLLHLSLSYNQLETI-PEGAFT 310
Query: 130 NVT-ITTLTLS 139
N++ + +LTLS
Sbjct: 311 NLSRLVSLTLS 321
Score = 139 (54.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 33/83 (39%), Positives = 45/83 (54%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
LS+++NQ ++ GA L +L SL+ HN I L +H FR L L L L N + A+
Sbjct: 294 LSLSYNQLETIPEGAFTNLSRLVSLTLSHNAITDLPEHVFRNLEQLVKLSLDSNNLTALH 353
Query: 76 GASLAHLSNLTTLDLSHNFLRAL 98
A +LS L L+LS N L L
Sbjct: 354 PALFHNLSRLQLLNLSRNQLTTL 376
Score = 124 (48.7 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 38/130 (29%), Positives = 61/130 (46%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L+ L++A N + + +GA L L L +N + L + + +LS+L L L N
Sbjct: 168 LRDLRTLNLAQNLLTQLPKGAFQSLTGLQMLKLSNNMLARLPEGALGSLSSLQELFLDGN 227
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
I +S + L +L L L HN + L L + L +L L L DN + + +
Sbjct: 228 AITELSPHLFSQLFSLEMLWLQHNAICHLPVSLFSSLHNLTFLSLKDNALRTLPEGLFAH 287
Query: 130 NVTITTLTLS 139
N + L+LS
Sbjct: 288 NQGLLHLSLS 297
Score = 105 (42.0 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 31/117 (26%), Positives = 56/117 (47%)
Query: 23 FSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHL 82
F++VR A +G LT + + Q+ LE +F L L L++ + + +S ++L
Sbjct: 61 FTTVRTRAFSGSPNLTKVVFLNTQVRHLEPDAFGGLPRLQDLEITGSPVSNLSAHIFSNL 120
Query: 83 SNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTLTLS 139
S+L L L + L L +DL + L+ L+L N + + + + TL L+
Sbjct: 121 SSLEKLTLDFDRLAGLPEDLFCHMDILESLQLQGNQLRTLPGRLFQSLRDLRTLNLA 177
Score = 102 (41.0 bits), Expect = 0.00028, P = 0.00028
Identities = 37/129 (28%), Positives = 54/129 (41%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
LSSL+ L + N + + + L L L HN I L F +L L+ L L N
Sbjct: 216 LSSLQELFLDGNAITELSPHLFSQLFSLEMLWLQHNAICHLPVSLFSSLHNLTFLSLKDN 275
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+ + AH L L LS+N L + + T L L L L N I+ + V +
Sbjct: 276 ALRTLPEGLFAHNQGLLHLSLSYNQLETIPEGAFTNLSRLVSLTLSHNAITDLPEHVFRN 335
Query: 130 NVTITTLTL 138
+ L+L
Sbjct: 336 LEQLVKLSL 344
Score = 101 (40.6 bits), Expect = 0.00072, P = 0.00072
Identities = 34/126 (26%), Positives = 59/126 (46%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
L+ L + NQ ++ L L +L+ N + L +F++L+ L L L++N +
Sbjct: 147 LESLQLQGNQLRTLPGRLFQSLRDLRTLNLAQNLLTQLPKGAFQSLTGLQMLKLSNNMLA 206
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVT 132
+ +L LS+L L L N + L+ L + L SL+ L L N I + +
Sbjct: 207 RLPEGALGSLSSLQELFLDGNAITELSPHLFSQLFSLEMLWLQHNAICHLPVSLFSSLHN 266
Query: 133 ITTLTL 138
+T L+L
Sbjct: 267 LTFLSL 272
Score = 101 (40.6 bits), Expect = 0.00072, P = 0.00072
Identities = 34/126 (26%), Positives = 53/126 (42%)
Query: 14 KVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVA 73
KV+ + + Q + A GL +L L + + L H F LS+L L L +R+
Sbjct: 77 KVVFL-NTQVRHLEPDAFGGLPRLQDLEITGSPVSNLSAHIFSNLSSLEKLTLDFDRLAG 135
Query: 74 VSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTI 133
+ H+ L +L L N LR L L L+ L+ L L N ++ + +
Sbjct: 136 LPEDLFCHMDILESLQLQGNQLRTLPGRLFQSLRDLRTLNLAQNLLTQLPKGAFQSLTGL 195
Query: 134 TTLTLS 139
L LS
Sbjct: 196 QMLKLS 201
>UNIPROTKB|Q86VH5 [details] [associations]
symbol:LRRTM3 "Leucine-rich repeat transmembrane neuronal
protein 3" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 HOGENOM:HOG000290681
HOVERGEN:HBG052362 EMBL:AY182028 EMBL:AY358315 EMBL:AK290168
EMBL:BX640611 EMBL:BC111492 EMBL:BC113715 EMBL:BC113717
IPI:IPI00179801 IPI:IPI00607819 RefSeq:NP_821079.3
UniGene:Hs.652155 ProteinModelPortal:Q86VH5 SMR:Q86VH5
STRING:Q86VH5 PhosphoSite:Q86VH5 DMDM:68052341 PaxDb:Q86VH5
PRIDE:Q86VH5 DNASU:347731 Ensembl:ENST00000361320
Ensembl:ENST00000373722 GeneID:347731 KEGG:hsa:347731
UCSC:uc001jmy.3 UCSC:uc001jmz.1 CTD:347731 GeneCards:GC10P068685
HGNC:HGNC:19410 HPA:HPA024109 MIM:610869 neXtProt:NX_Q86VH5
PharmGKB:PA134962991 InParanoid:Q86VH5 OMA:PCTYSKS
OrthoDB:EOG45TCMT PhylomeDB:Q86VH5 GenomeRNAi:347731 NextBio:99254
ArrayExpress:Q86VH5 Bgee:Q86VH5 CleanEx:HS_LRRTM3
Genevestigator:Q86VH5 Uniprot:Q86VH5
Length = 581
Score = 148 (57.2 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 38/131 (29%), Positives = 72/131 (54%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
+L++L + +N+ S+ R AG+ +L L HNQ L F L +L +L L N+I
Sbjct: 182 NLELLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRLVSLQNLYLQWNKI 241
Query: 72 VAVSGASLAHL-SNLTTLDLSHNFLRALT-QDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+V G +++ S+L LDLS N + A + + + +LQ L LD N ++ + +++
Sbjct: 242 -SVIGQTMSWTWSSLQRLDLSGNEIEAFSGPSVFQCVPNLQRLNLDSNKLTFIGQEILDS 300
Query: 130 NVTITTLTLSG 140
+++ ++L+G
Sbjct: 301 WISLNDISLAG 311
Score = 141 (54.7 bits), Expect = 9.8e-09, P = 9.8e-09
Identities = 43/135 (31%), Positives = 64/135 (47%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T R +++L+ L +++NQ S+ GL KL SL N + + F+ L LD
Sbjct: 128 TFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLELLD 187
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
L +NRI +++ A + L L L HN L L L SLQ L L N IS++
Sbjct: 188 LGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRLVSLQNLYLQWNKISVIGQT 247
Query: 126 VIGDNVTITTLTLSG 140
+ ++ L LSG
Sbjct: 248 MSWTWSSLQRLDLSG 262
Score = 140 (54.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 35/123 (28%), Positives = 59/123 (47%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
LS+ +N ++ GL++LT L HN I +++++F + L L L+ NRI
Sbjct: 66 LSLRYNSLQKLKYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFL 125
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITT 135
+ ++NL LDLS+N L +L + L+ L L L N + + + D +
Sbjct: 126 NNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLEL 185
Query: 136 LTL 138
L L
Sbjct: 186 LDL 188
Score = 130 (50.8 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 34/129 (26%), Positives = 63/129 (48%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L+ L L + HN S++ A G+ +L L N+I +++FR ++ L +LDL++N
Sbjct: 84 LNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFLNNTFRPVTNLRNLDLSYN 143
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
++ ++ L L +L L N LR + + ++L+ L L N I + +V
Sbjct: 144 QLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLELLDLGYNRIRSLARNVFAG 203
Query: 130 NVTITTLTL 138
+ + L L
Sbjct: 204 MIRLKELHL 212
Score = 117 (46.2 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 34/126 (26%), Positives = 56/126 (44%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
LK L ++ N+ S + L +L +NQ+ L FR L L L L N +
Sbjct: 111 LKELILSSNRISYFLNNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLR 170
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVT 132
+ NL LDL +N +R+L +++ + L+EL L+ N S + + V+
Sbjct: 171 TIPVRIFQDCRNLELLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRLVS 230
Query: 133 ITTLTL 138
+ L L
Sbjct: 231 LQNLYL 236
>WB|WBGene00006593 [details] [associations]
symbol:tol-1 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0007166 "cell
surface receptor signaling pathway" evidence=TAS] [GO:0009790
"embryo development" evidence=IMP] [GO:0006952 "defense response"
evidence=IMP] [GO:0005623 "cell" evidence=IDA] [GO:0030424 "axon"
evidence=ND] [GO:0005057 "receptor signaling protein activity"
evidence=ISS] InterPro:IPR000157 InterPro:IPR001611 Pfam:PF01582
PROSITE:PS50104 PROSITE:PS51450 GO:GO:0009792 GO:GO:0040007
GO:GO:0006952 GO:GO:0002119 GO:GO:0010171 GO:GO:0005622
GO:GO:0005623 GO:GO:0007166 GO:GO:0005057
GeneTree:ENSGT00700000104286 SUPFAM:SSF52200 HSSP:O60603
EMBL:FO080418 RefSeq:NP_001020983.1 ProteinModelPortal:Q9N5Z3
SMR:Q9N5Z3 DIP:DIP-24325N IntAct:Q9N5Z3 MINT:MINT-1108170
EnsemblMetazoa:C07F11.1 GeneID:171635 KEGG:cel:CELE_C07F11.1
UCSC:C07F11.1 CTD:171635 WormBase:C07F11.1 InParanoid:Q9N5Z3
OMA:NPYLVEI NextBio:872085 ArrayExpress:Q9N5Z3 Uniprot:Q9N5Z3
Length = 1221
Score = 152 (58.6 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 36/129 (27%), Positives = 68/129 (52%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
++L+ L ++ NQ R L K+ +L +N +++LE S L L LDL+HN+
Sbjct: 354 TNLQTLDLSSNQLRVFRDEVLPENSKIGNLRLSNNSLELLEPSSLSGLK-LESLDLSHNK 412
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDN 130
+ V A++ + L +DLSHN + + Q ++ +K L + L +N + + P + D+
Sbjct: 413 LTEVP-AAIGKVEQLKKVDLSHNRIAKVYQYVLNKIKQLHTVDLSNNQLQSIGPYIFSDS 471
Query: 131 VTITTLTLS 139
+ +L +S
Sbjct: 472 SELHSLDVS 480
Score = 150 (57.9 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 38/134 (28%), Positives = 69/134 (51%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLE-DHSFRALSTLSHLD 65
V L+SL L+++ N+ + + +L L +N++D L + + ++HL
Sbjct: 278 VAELASLVALNVSRNEIEAGNSSVFSS-PELEMLDASYNKLDSLPVEWLQKCEKRIAHLH 336
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
L HN I ++G LA+ +NL TLDLS N LR +++ + LRL +N + ++ P
Sbjct: 337 LEHNSIEQLTGGVLANATNLQTLDLSSNQLRVFRDEVLPENSKIGNLRLSNNSLELLEPS 396
Query: 126 VIGDNVTITTLTLS 139
+ + + +L LS
Sbjct: 397 SLS-GLKLESLDLS 409
Score = 127 (49.8 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 34/115 (29%), Positives = 61/115 (53%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
S + L +++N + +L+GL KL SL HN++ + + + L +DL+HNR
Sbjct: 378 SKIGNLRLSNNSLELLEPSSLSGL-KLESLDLSHNKLTEVPA-AIGKVEQLKKVDLSHNR 435
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
I V L + L T+DLS+N L+++ + + L L + +N+IS++ D
Sbjct: 436 IAKVYQYVLNKIKQLHTVDLSNNQLQSIGPYIFSDSSELHSLDVSNNEISLLFKD 490
Score = 110 (43.8 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 28/127 (22%), Positives = 64/127 (50%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
+ ++ LK + ++HN+ + V + L + +L ++ +NQ+ + + F S L LD+
Sbjct: 420 IGKVEQLKKVDLSHNRIAKVYQYVLNKIKQLHTVDLSNNQLQSIGPYIFSDSSELHSLDV 479
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDV 126
++N I + + A L + + N +++L + L T L+ L + N+I ++
Sbjct: 480 SNNEISLLFKDAFARCPKLRKISMKMNKIKSLDEGL-TEASGLRRLDVSHNEILVLKWSA 538
Query: 127 IGDNVTI 133
+ +N+ I
Sbjct: 539 LPENLEI 545
Score = 108 (43.1 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 28/112 (25%), Positives = 59/112 (52%)
Query: 10 LSSLKV--LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
LS LK+ L ++HN+ + V A+ +++L + HN+I + + + L +DL+
Sbjct: 398 LSGLKLESLDLSHNKLTEVP-AAIGKVEQLKKVDLSHNRIAKVYQYVLNKIKQLHTVDLS 456
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
+N++ ++ + S L +LD+S+N + L +D L+++ + N I
Sbjct: 457 NNQLQSIGPYIFSDSSELHSLDVSNNEISLLFKDAFARCPKLRKISMKMNKI 508
>UNIPROTKB|Q6UXK5 [details] [associations]
symbol:LRRN1 "Leucine-rich repeat neuronal protein 1"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
MEROPS:I43.001 CleanEx:HS_LRRN1 CTD:57633 HOGENOM:HOG000252914
HOVERGEN:HBG052361 OMA:GINNMGE OrthoDB:EOG4XKV6G EMBL:AB074161
EMBL:AB040930 EMBL:AY358312 EMBL:BC034947 EMBL:AK023273
IPI:IPI00021485 RefSeq:NP_065924.3 UniGene:Hs.163244
ProteinModelPortal:Q6UXK5 SMR:Q6UXK5 STRING:Q6UXK5
PhosphoSite:Q6UXK5 DMDM:60390188 PaxDb:Q6UXK5 PRIDE:Q6UXK5
DNASU:57633 Ensembl:ENST00000319331 GeneID:57633 KEGG:hsa:57633
UCSC:uc003bpt.4 GeneCards:GC03P003816 HGNC:HGNC:20980 HPA:HPA011071
neXtProt:NX_Q6UXK5 PharmGKB:PA134935557 InParanoid:Q6UXK5
GenomeRNAi:57633 NextBio:64341 Bgee:Q6UXK5 Genevestigator:Q6UXK5
GermOnline:ENSG00000175928 Uniprot:Q6UXK5
Length = 716
Score = 149 (57.5 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 37/134 (27%), Positives = 67/134 (50%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
+++L +L L + N F++++ LA L +LT+L NQI + D+ + LS L L +
Sbjct: 91 LQQLFNLTELDFSQNNFTNIKEVGLANLTQLTTLHLEENQITEMTDYCLQDLSNLQELYI 150
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDV 126
HN+I +S + A L NL L L+ N L+ + +L+ L + +N + +
Sbjct: 151 NHNQISTISAHAFAGLKNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGENPVIGILDMN 210
Query: 127 IGDNVTITTLTLSG 140
+ +L L+G
Sbjct: 211 FKPLANLRSLVLAG 224
Score = 139 (54.0 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 36/122 (29%), Positives = 64/122 (52%)
Query: 1 MSIWCTVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALST 60
M+ +C ++ LS+L+ L I HNQ S++ A AGL L L + N++ V++ F +
Sbjct: 134 MTDYC-LQDLSNLQELYINHNQISTISAHAFAGLKNLLRLHLNSNKLKVIDSRWFDSTPN 192
Query: 61 LSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
L L + N ++ + + L+NL +L L+ +L + + + L SL+ L DN +
Sbjct: 193 LEILMIGENPVIGILDMNFKPLANLRSLVLAGMYLTDIPGNALVGLDSLESLSFYDNKLV 252
Query: 121 MV 122
V
Sbjct: 253 KV 254
>UNIPROTKB|F1MJZ4 [details] [associations]
symbol:IGFALS "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005634 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GeneTree:ENSGT00690000101816 EMBL:DAAA02057304
IPI:IPI00807324 Ensembl:ENSBTAT00000047326 OMA:FCGLGEL
Uniprot:F1MJZ4
Length = 610
Score = 148 (57.2 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 38/116 (32%), Positives = 57/116 (49%)
Query: 9 RLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 68
+L L+ L + HN ++V GA G+ L L HN++ L + SF L L L L+H
Sbjct: 244 KLPKLQKLYLDHNLVAAVAPGAFLGMKALRWLDLSHNRVGSLLEDSFPGLLGLHVLRLSH 303
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTP 124
N + + + L L L L HN LR L ++ L L+ L L+DN + + P
Sbjct: 304 NVLAGLRPRTFKDLHFLEELQLGHNRLRQLPEEAFAGLGQLEVLALNDNQLQELRP 359
Score = 147 (56.8 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 38/112 (33%), Positives = 57/112 (50%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
L L +++N S + G GL L L+ N + VL D +F+ L+ L L LA N++
Sbjct: 152 LASLGLSNNLLSRLDEGLFRGLAHLWDLNLGWNSLTVLPDTAFQGLAGLRELVLAGNKLA 211
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTP 124
+ L L LDLS N LR++ ++ L LQ+L LD N ++ V P
Sbjct: 212 YLQPPLFCGLGELRELDLSRNTLRSVKANVFVKLPKLQKLYLDHNLVAAVAP 263
Score = 147 (56.8 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 41/119 (34%), Positives = 57/119 (47%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
LS L+ L + N + V +L GL +L L NQ+ L F+ L L +L LA N
Sbjct: 413 LSGLRRLFLKGNSIADVDERSLGGLAELLELDLTANQLTHLPGRLFQDLGRLEYLLLARN 472
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
R+ A+ +L L LD+SHN L AL + PL L+ L L +N + P G
Sbjct: 473 RLSALPADALGPLQRTFWLDVSHNRLEALPAAALAPLSRLRFLSLRNNSLRTFAPQPPG 531
Score = 145 (56.1 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 45/149 (30%), Positives = 70/149 (46%)
Query: 1 MSIWCTVRRLSSL--------KVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLED 52
+S++C+ R L+ L + L + N FSS+ A L L L+ + + LE
Sbjct: 60 LSVFCSSRNLTQLPGGLPPGTRALWLDGNNFSSIPAAAFRNLSGLGFLNLQGSGLASLEP 119
Query: 53 HSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQEL 112
+ L L HL L HNR+ A++ + H L +L LS+N L L + L L L +L
Sbjct: 120 QALLGLRGLCHLHLEHNRLHALAAHTFLHTPGLASLGLSNNLLSRLDEGLFRGLAHLWDL 179
Query: 113 RLDDNDISMVTPDVIGDNVT-ITTLTLSG 140
L N ++ V PD + + L L+G
Sbjct: 180 NLGWNSLT-VLPDTAFQGLAGLRELVLAG 207
Score = 140 (54.3 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 38/130 (29%), Positives = 57/130 (43%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L+ L ++ N SV+ L KL L HN + + +F + L LDL+HN
Sbjct: 221 LGELRELDLSRNTLRSVKANVFVKLPKLQKLYLDHNLVAAVAPGAFLGMKALRWLDLSHN 280
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
R+ ++ S L L L LSHN L L L L+EL+L N + + +
Sbjct: 281 RVGSLLEDSFPGLLGLHVLRLSHNVLAGLRPRTFKDLHFLEELQLGHNRLRQLPEEAFAG 340
Query: 130 NVTITTLTLS 139
+ L L+
Sbjct: 341 LGQLEVLALN 350
Score = 129 (50.5 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 36/120 (30%), Positives = 58/120 (48%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L+ L+ L +A N+ + ++ GL +L L N + ++ + F L L L L HN
Sbjct: 197 LAGLRELVLAGNKLAYLQPPLFCGLGELRELDLSRNTLRSVKANVFVKLPKLQKLYLDHN 256
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+ AV+ + + L LDLSHN + +L +D L L LRL N ++ + P D
Sbjct: 257 LVAAVAPGAFLGMKALRWLDLSHNRVGSLLEDSFPGLLGLHVLRLSHNVLAGLRPRTFKD 316
Score = 120 (47.3 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 34/115 (29%), Positives = 51/115 (44%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L VL ++HN + +R L L L HN++ L + +F L L L L N
Sbjct: 293 LLGLHVLRLSHNVLAGLRPRTFKDLHFLEELQLGHNRLRQLPEEAFAGLGQLEVLALNDN 352
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTP 124
++ + L NL L+LS N LR L + L L L L+ ++ + P
Sbjct: 353 QLQELRPGGFLGLRNLAVLNLSSNCLRDLPERAFQGLAKLHSLHLEGGCLARLGP 407
Score = 119 (46.9 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 33/108 (30%), Positives = 51/108 (47%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
+ +L+ L ++HN+ S+ + GL L L HN + L +F+ L L L L HN
Sbjct: 269 MKALRWLDLSHNRVGSLLEDSFPGLLGLHVLRLSHNVLAGLRPRTFKDLHFLEELQLGHN 328
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
R+ + + A L L L L+ N L+ L L++L L L N
Sbjct: 329 RLRQLPEEAFAGLGQLEVLALNDNQLQELRPGGFLGLRNLAVLNLSSN 376
Score = 118 (46.6 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 35/117 (29%), Positives = 55/117 (47%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
R LS L L++ + +S+ AL GL L L HN++ L H+F L+ L L+
Sbjct: 99 RNLSGLGFLNLQGSGLASLEPQALLGLRGLCHLHLEHNRLHALAAHTFLHTPGLASLGLS 158
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTP 124
+N + + L++L L+L N L L L L+EL L N ++ + P
Sbjct: 159 NNLLSRLDEGLFRGLAHLWDLNLGWNSLTVLPDTAFQGLAGLRELVLAGNKLAYLQP 215
Score = 116 (45.9 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 41/119 (34%), Positives = 54/119 (45%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L +L VL+++ N + A GL KL SL + L +F LS L L L N
Sbjct: 365 LRNLAVLNLSSNCLRDLPERAFQGLAKLHSLHLEGGCLARLGPLAFAGLSGLRRLFLKGN 424
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
I V SL L+ L LDL+ N L L L L L+ L L N +S + D +G
Sbjct: 425 SIADVDERSLGGLAELLELDLTANQLTHLPGRLFQDLGRLEYLLLARNRLSALPADALG 483
Score = 109 (43.4 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 37/134 (27%), Positives = 59/134 (44%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T + L L+ L + HN+ + A AGL +L L+ + NQ+ L F L L+ L+
Sbjct: 313 TFKDLHFLEELQLGHNRLRQLPEEAFAGLGQLEVLALNDNQLQELRPGGFLGLRNLAVLN 372
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
L+ N + + + L+ L +L L L L L L+ L L N I+ V
Sbjct: 373 LSSNCLRDLPERAFQGLAKLHSLHLEGGCLARLGPLAFAGLSGLRRLFLKGNSIADVDER 432
Query: 126 VIGDNVTITTLTLS 139
+G + L L+
Sbjct: 433 SLGGLAELLELDLT 446
Score = 105 (42.0 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 32/111 (28%), Positives = 51/111 (45%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L+VL++ NQ +R G GL L L+ N + L + +F+ L+ L L L
Sbjct: 341 LGQLEVLALNDNQLQELRPGGFLGLRNLAVLNLSSNCLRDLPERAFQGLAKLHSLHLEGG 400
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
+ + + A LS L L L N + + + + L L EL L N ++
Sbjct: 401 CLARLGPLAFAGLSGLRRLFLKGNSIADVDERSLGGLAELLELDLTANQLT 451
Score = 105 (42.0 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 36/132 (27%), Positives = 56/132 (42%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
R L+ L L++ N + + A GL L L N++ L+ F L L LDL+
Sbjct: 171 RGLAHLWDLNLGWNSLTVLPDTAFQGLAGLRELVLAGNKLAYLQPPLFCGLGELRELDLS 230
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI 127
N + +V L L L L HN + A+ +K+L+ L L N + + D
Sbjct: 231 RNTLRSVKANVFVKLPKLQKLYLDHNLVAAVAPGAFLGMKALRWLDLSHNRVGSLLEDSF 290
Query: 128 GDNVTITTLTLS 139
+ + L LS
Sbjct: 291 PGLLGLHVLRLS 302
>FB|FBgn0264089 [details] [associations]
symbol:sli "slit" species:7227 "Drosophila melanogaster"
[GO:0031012 "extracellular matrix" evidence=IDA] [GO:0008347 "glial
cell migration" evidence=IMP] [GO:0050919 "negative chemotaxis"
evidence=IMP] [GO:0007509 "mesoderm migration involved in
gastrulation" evidence=IMP] [GO:0005578 "proteinaceous
extracellular matrix" evidence=TAS] [GO:0008078 "mesodermal cell
migration" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IGI;IMP;IPI] [GO:0035385 "Roundabout signaling pathway"
evidence=IGI] [GO:0030182 "neuron differentiation" evidence=IMP]
[GO:0010632 "regulation of epithelial cell migration" evidence=IMP]
[GO:2000274 "regulation of epithelial cell migration, open tracheal
system" evidence=IMP] [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007427 "epithelial cell migration, open tracheal
system" evidence=IMP] [GO:0016199 "axon midline choice point
recognition" evidence=IMP] [GO:0001764 "neuron migration"
evidence=IMP] [GO:0007432 "salivary gland boundary specification"
evidence=IMP] [GO:0035050 "embryonic heart tube development"
evidence=IMP] [GO:0022409 "positive regulation of cell-cell
adhesion" evidence=IMP] [GO:0071666 "Slit-Robo signaling complex"
evidence=IDA] [GO:0048495 "Roundabout binding" evidence=IPI]
[GO:0008201 "heparin binding" evidence=IDA] [GO:0003151 "outflow
tract morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0008406 "gonad development" evidence=IMP] [GO:0007502
"digestive tract mesoderm development" evidence=IMP] [GO:0046331
"lateral inhibition" evidence=IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 EMBL:AE013599
GO:GO:0005886 GO:GO:0001764 GO:GO:0008406 GO:GO:0005578
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0016199 GO:GO:0008201 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
Reactome:REACT_113552 GO:GO:0048813 PROSITE:PS01186 GO:GO:0046331
InterPro:IPR001791 Pfam:PF00054 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 GO:GO:0007427 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0003151 GO:GO:0008078 GO:GO:0008347
GO:GO:0007432 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 GO:GO:0022409 InterPro:IPR026906 Pfam:PF13306
GO:GO:2000274 GO:GO:0035050 Pfam:PF01463 GO:GO:0007502
GeneTree:ENSGT00700000104083 GO:GO:0035385 KO:K06839 GO:GO:0050929
EMBL:X53959 EMBL:AF126540 EMBL:M23543 PIR:A36665 PIR:B36665
RefSeq:NP_001097333.1 RefSeq:NP_001097334.1 RefSeq:NP_476727.1
RefSeq:NP_476728.1 RefSeq:NP_476729.1 UniGene:Dm.4729 PDB:1W8A
PDBsum:1W8A ProteinModelPortal:P24014 SMR:P24014 STRING:P24014
PaxDb:P24014 EnsemblMetazoa:FBtr0330731 EnsemblMetazoa:FBtr0330733
GeneID:36746 KEGG:dme:Dmel_CG8355 CTD:36746 FlyBase:FBgn0003425
InParanoid:P24014 OMA:RHKMFKG OrthoDB:EOG46DJHK PhylomeDB:P24014
EvolutionaryTrace:P24014 GenomeRNAi:36746 NextBio:800151
Bgee:P24014 GermOnline:CG8355 GO:GO:0071666 Uniprot:P24014
Length = 1504
Score = 144 (55.7 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 38/124 (30%), Positives = 68/124 (54%)
Query: 15 VLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAV 74
V+ + NQ + RG A + + L N+I+ + R L +L+ LDL++N+I +
Sbjct: 749 VVRCSRNQLKEIPRGIPA---ETSELYLESNEIEQIHYERIRHLRSLTRLDLSNNQITIL 805
Query: 75 SGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTIT 134
S + A+L+ L+TL +S+N L+ L + ++ L +L+ L L N ISM+ D ++T
Sbjct: 806 SNYTFANLTKLSTLIISYNKLQCLQRHALSGLNNLRVLSLHGNRISMLPEGSFEDLKSLT 865
Query: 135 TLTL 138
+ L
Sbjct: 866 HIAL 869
Score = 133 (51.9 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 37/133 (27%), Positives = 69/133 (51%)
Query: 8 RRLSS-LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
R++S+ ++ L + N + + L KL L NQI +E +SF+ L +L L L
Sbjct: 96 RKISADVERLELQGNNLTVIYETDFQRLTKLRMLQLTDNQIHTIERNSFQDLVSLERLRL 155
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDV 126
+NR+ A+ + ++L LD+S+N + + + + +SL+ L+LD+N I+ +
Sbjct: 156 NNNRLKAIPENFVTSSASLLRLDISNNVITTVGRRVFKGAQSLRSLQLDNNQITCLDEHA 215
Query: 127 IGDNVTITTLTLS 139
V + LTL+
Sbjct: 216 FKGLVELEILTLN 228
Score = 128 (50.1 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 31/132 (23%), Positives = 67/132 (50%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
+RL+ L++L + NQ ++ R + L L L ++N++ + ++ + ++L LD++
Sbjct: 121 QRLTKLRMLQLTDNQIHTIERNSFQDLVSLERLRLNNNRLKAIPENFVTSSASLLRLDIS 180
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI 127
+N I V +L +L L +N + L + L L+ L L++N+++ + ++
Sbjct: 181 NNVITTVGRRVFKGAQSLRSLQLDNNQITCLDEHAFKGLVELEILTLNNNNLTSLPHNIF 240
Query: 128 GDNVTITTLTLS 139
G + L LS
Sbjct: 241 GGLGRLRALRLS 252
Score = 125 (49.1 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 35/104 (33%), Positives = 53/104 (50%)
Query: 35 DKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNF 94
D T L N I L SF + L +DL++N I ++ +L+ L LTTL L N
Sbjct: 346 DDTTELRLEQNFITELPPKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQLTTLVLYGNK 405
Query: 95 LRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTLTL 138
++ L + L SLQ L L+ N+IS + D D +++ L+L
Sbjct: 406 IKDLPSGVFKGLGSLQLLLLNANEISCIRKDAFRDLHSLSLLSL 449
Score = 122 (48.0 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 30/104 (28%), Positives = 53/104 (50%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
L + N+ + + L LT L +NQI +L +++F L+ LS L +++N++ +
Sbjct: 771 LYLESNEIEQIHYERIRHLRSLTRLDLSNNQITILSNYTFANLTKLSTLIISYNKLQCLQ 830
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
+L+ L+NL L L N + L + LKSL + L N +
Sbjct: 831 RHALSGLNNLRVLSLHGNRISMLPEGSFEDLKSLTHIALGSNPL 874
Score = 118 (46.6 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 30/84 (35%), Positives = 46/84 (54%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T L+ L L I++N+ ++R AL+GL+ L LS H N+I +L + SF L +L+H+
Sbjct: 809 TFANLTKLSTLIISYNKLQCLQRHALSGLNNLRVLSLHGNRISMLPEGSFEDLKSLTHIA 868
Query: 66 LAHNRIVAVSGASLAHLSNLTTLD 89
L N + G L S+ LD
Sbjct: 869 LGSNPLYCDCG--LKWFSDWIKLD 890
Score = 115 (45.5 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 30/105 (28%), Positives = 54/105 (51%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
L+ + +++N S + AL+GL +LT+L + N+I L F+ L +L L L N I
Sbjct: 372 LRRIDLSNNNISRIAHDALSGLKQLTTLVLYGNKIKDLPSGVFKGLGSLQLLLLNANEIS 431
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
+ + L +L+ L L N +++L +KS++ + L N
Sbjct: 432 CIRKDAFRDLHSLSLLSLYDNNIQSLANGTFDAMKSIKTVHLAKN 476
Score = 112 (44.5 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 28/87 (32%), Positives = 45/87 (51%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
+R L SL L +++NQ + + A L KL++L +N++ L+ H+ L+ L L L
Sbjct: 786 IRHLRSLTRLDLSNNQITILSNYTFANLTKLSTLIISYNKLQCLQRHALSGLNNLRVLSL 845
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHN 93
NRI + S L +LT + L N
Sbjct: 846 HGNRISMLPEGSFEDLKSLTHIALGSN 872
Score = 109 (43.4 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 27/85 (31%), Positives = 41/85 (48%)
Query: 9 RLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 68
RL L L + NQ + + A G + L N+I + + F L L L+L
Sbjct: 593 RLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYD 652
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHN 93
N+I V S HL++LT+L+L+ N
Sbjct: 653 NQISCVMPGSFEHLNSLTSLNLASN 677
Score = 108 (43.1 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 28/83 (33%), Positives = 42/83 (50%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
+SL L I++N ++V R G L SL +NQI L++H+F+ L L L L +N
Sbjct: 172 ASLLRLDISNNVITTVGRRVFKGAQSLRSLQLDNNQITCLDEHAFKGLVELEILTLNNNN 231
Query: 71 IVAVSGASLAHLSNLTTLDLSHN 93
+ ++ L L L LS N
Sbjct: 232 LTSLPHNIFGGLGRLRALRLSDN 254
Score = 72 (30.4 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 86 TTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTLTLSG 140
T L L NF+ L + + L+ + L +N+IS + D + +TTL L G
Sbjct: 349 TELRLEQNFITELPPKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQLTTLVLYG 403
Score = 38 (18.4 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 96 RALTQDLITPLKSLQELRLDDNDISMVTP 124
++LT +T ELRL+ N I+ + P
Sbjct: 335 KSLTSVPVTLPDDTTELRLEQNFITELPP 363
>ZFIN|ZDB-GENE-040426-1227 [details] [associations]
symbol:mb21d2b "Mab-21 domain containing 2b"
species:7955 "Danio rerio" [GO:0016020 "membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
PROSITE:PS51450 SMART:SM00060 ZFIN:ZDB-GENE-040426-1227
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 GeneTree:ENSGT00660000095307 EMBL:CABZ01031876
EMBL:CABZ01031877 EMBL:CABZ01072581 EMBL:CU499339 IPI:IPI00995611
Ensembl:ENSDART00000124704 Uniprot:E7EZ70
Length = 742
Score = 149 (57.5 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 36/119 (30%), Positives = 61/119 (51%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF-RALSTLSHLDLAH 68
L SL+ L + N+ S + L GL L L +NQI +E+ SF ++T+ LDL++
Sbjct: 98 LKSLRALHMDGNRLSVINSNQLKGLMNLRHLILGNNQIHHIEESSFDEFVATIEDLDLSY 157
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI 127
N + + ++A ++N+ TL L HN + + T L L L + N + + PD +
Sbjct: 158 NNLRTLPWEAIARMTNINTLTLDHNLIDHIGVGTFTLLTKLVRLDMTSNRLQTLPPDTL 216
Score = 136 (52.9 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 41/129 (31%), Positives = 65/129 (50%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
++SL L+++ N S + A GL L +L N++ V+ + + L L HL L +N
Sbjct: 74 MTSLVHLTLSRNTISQIAPHAFMGLKSLRALHMDGNRLSVINSNQLKGLMNLRHLILGNN 133
Query: 70 RIVAVSGASLAH-LSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
+I + +S ++ + LDLS+N LR L + I + ++ L LD N I D IG
Sbjct: 134 QIHHIEESSFDEFVATIEDLDLSYNNLRTLPWEAIARMTNINTLTLDHNLI-----DHIG 188
Query: 129 DNVTITTLT 137
T T LT
Sbjct: 189 VG-TFTLLT 196
Score = 113 (44.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 32/124 (25%), Positives = 57/124 (45%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
L + N ++VRR + L L+ N I + H+F L +L L + NR+ ++
Sbjct: 56 LRLTDNFITAVRRKDFLNMTSLVHLTLSRNTISQIAPHAFMGLKSLRALHMDGNRLSVIN 115
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITP-LKSLQELRLDDNDISMVTPDVIGDNVTIT 134
L L NL L L +N + + + + ++++L L N++ + + I I
Sbjct: 116 SNQLKGLMNLRHLILGNNQIHHIEESSFDEFVATIEDLDLSYNNLRTLPWEAIARMTNIN 175
Query: 135 TLTL 138
TLTL
Sbjct: 176 TLTL 179
>TAIR|locus:2144392 [details] [associations]
symbol:RLP53 "receptor like protein 53" species:3702
"Arabidopsis thaliana" [GO:0005576 "extracellular region"
evidence=ISM] [GO:0006952 "defense response" evidence=ISS]
[GO:0016301 "kinase activity" evidence=ISS] [GO:0007165 "signal
transduction" evidence=IC] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 EMBL:CP002688 GenomeReviews:BA000015_GR
eggNOG:COG4886 InterPro:IPR025875 Pfam:PF12799 InterPro:IPR013210
Pfam:PF08263 HOGENOM:HOG000116562 ProtClustDB:CLSN2683476
EMBL:AF160760 IPI:IPI00533066 RefSeq:NP_198058.1 UniGene:At.65554
ProteinModelPortal:Q9S9U3 SMR:Q9S9U3 STRING:Q9S9U3
EnsemblPlants:AT5G27060.1 GeneID:832764 KEGG:ath:AT5G27060
TAIR:At5g27060 InParanoid:Q9S9U3 OMA:FLDYINM PhylomeDB:Q9S9U3
Genevestigator:Q9S9U3 Uniprot:Q9S9U3
Length = 957
Score = 150 (57.9 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 45/136 (33%), Positives = 64/136 (47%)
Query: 3 IWCTVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLS 62
I ++ LS L L ++ N FS ++ L +LT L+ NQ S LS L+
Sbjct: 137 ITSSIENLSHLTYLDLSSNHFSGQILNSIGNLSRLTYLNLFDNQFSGQAPSSICNLSHLT 196
Query: 63 HLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
LDL++NR +S+ LS+LTTL L N I L +L L L +N+ S
Sbjct: 197 FLDLSYNRFFGQFPSSIGGLSHLTTLSLFSNKFSGQIPSSIGNLSNLTTLDLSNNNFSGQ 256
Query: 123 TPDVIGDNVTITTLTL 138
P IG+ +T L L
Sbjct: 257 IPSFIGNLSQLTFLGL 272
Score = 139 (54.0 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 45/136 (33%), Positives = 66/136 (48%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLT--SLSCHHNQIDVLEDHSFRALSTLSH 63
++R L L L ++ N F ++ L LT LS +H +L +S LS L++
Sbjct: 116 SIRNLHFLTTLDLSFNDFKGQITSSIENLSHLTYLDLSSNHFSGQIL--NSIGNLSRLTY 173
Query: 64 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVT 123
L+L N+ + +S+ +LS+LT LDLS+N I L L L L N S
Sbjct: 174 LNLFDNQFSGQAPSSICNLSHLTFLDLSYNRFFGQFPSSIGGLSHLTTLSLFSNKFSGQI 233
Query: 124 PDVIGDNVTITTLTLS 139
P IG+ +TTL LS
Sbjct: 234 PSSIGNLSNLTTLDLS 249
Score = 136 (52.9 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 42/135 (31%), Positives = 69/135 (51%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
++ LS L L +++N+F ++ GL LT+LS N+ S LS L+ LD
Sbjct: 188 SICNLSHLTFLDLSYNRFFGQFPSSIGGLSHLTTLSLFSNKFSGQIPSSIGNLSNLTTLD 247
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDL-SHNFLRALTQDLITPLKSLQELRLDDNDISMVTP 124
L++N + + +LS LT L L S+NF+ + L L L +DDN +S P
Sbjct: 248 LSNNNFSGQIPSFIGNLSQLTFLGLFSNNFVGEIPSSFGN-LNQLTRLYVDDNKLSGNFP 306
Query: 125 DVIGDNVTITTLTLS 139
+V+ + ++ L+LS
Sbjct: 307 NVLLNLTGLSLLSLS 321
Score = 132 (51.5 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 42/131 (32%), Positives = 59/131 (45%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
++ LS L L++ NQFS ++ L LT L +N+ S LS L+ L
Sbjct: 164 SIGNLSRLTYLNLFDNQFSGQAPSSICNLSHLTFLDLSYNRFFGQFPSSIGGLSHLTTLS 223
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
L N+ +S+ +LSNLTTLDLS+N I L L L L N+ P
Sbjct: 224 LFSNKFSGQIPSSIGNLSNLTTLDLSNNNFSGQIPSFIGNLSQLTFLGLFSNNFVGEIPS 283
Query: 126 VIGDNVTITTL 136
G+ +T L
Sbjct: 284 SFGNLNQLTRL 294
Score = 107 (42.7 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 35/135 (25%), Positives = 60/135 (44%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
++ LS+L L +++N FS + L +LT L N SF L+ L+ L
Sbjct: 236 SIGNLSNLTTLDLSNNNFSGQIPSFIGNLSQLTFLGLFSNNFVGEIPSSFGNLNQLTRLY 295
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
+ N++ L +L+ L+ L LS+N IT L +L + DN + P
Sbjct: 296 VDDNKLSGNFPNVLLNLTGLSLLSLSNNKFTGTLPPNITSLSNLMDFDASDNAFTGTFPS 355
Query: 126 VIGDNVTITTLTLSG 140
+ ++T + L+G
Sbjct: 356 FLFTIPSLTYIRLNG 370
>UNIPROTKB|Q86UN3 [details] [associations]
symbol:RTN4RL2 "Reticulon-4 receptor-like 2" species:9606
"Homo sapiens" [GO:0009897 "external side of plasma membrane"
evidence=IEA] [GO:0045121 "membrane raft" evidence=IEA] [GO:0009986
"cell surface" evidence=IDA] [GO:0004872 "receptor activity"
evidence=IDA] [GO:0031103 "axon regeneration" evidence=TAS]
[GO:0046658 "anchored to plasma membrane" evidence=IDA]
GO:GO:0009986 GO:GO:0009897 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0004872
GO:GO:0045121 InterPro:IPR000372 SMART:SM00013 GO:GO:0046658
GO:GO:0031103 EMBL:AP002893 HOGENOM:HOG000116109 HOVERGEN:HBG063707
OrthoDB:EOG4FXR7G EMBL:AF532858 EMBL:AY250221 EMBL:BC113673
EMBL:BC117276 EMBL:BK001302 IPI:IPI00328746 RefSeq:NP_848665.1
UniGene:Hs.502618 ProteinModelPortal:Q86UN3 SMR:Q86UN3
IntAct:Q86UN3 STRING:Q86UN3 PhosphoSite:Q86UN3 DMDM:74759401
PaxDb:Q86UN3 PRIDE:Q86UN3 Ensembl:ENST00000335099 GeneID:349667
KEGG:hsa:349667 UCSC:uc010rjt.2 CTD:349667 GeneCards:GC11P057228
HGNC:HGNC:23053 HPA:CAB024870 MIM:610462 neXtProt:NX_Q86UN3
PharmGKB:PA134964131 InParanoid:Q86UN3 KO:K16661 OMA:WFREARV
PhylomeDB:Q86UN3 GenomeRNAi:349667 NextBio:99528
ArrayExpress:Q86UN3 Bgee:Q86UN3 CleanEx:HS_RTN4RL2
Genevestigator:Q86UN3 GermOnline:ENSG00000186907 Uniprot:Q86UN3
Length = 420
Score = 145 (56.1 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 40/110 (36%), Positives = 58/110 (52%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
R L SL+ L + N ++ A L L+ L H N++ +L +H FR L +L L L
Sbjct: 152 RGLVSLQYLYLQENSLLHLQDDLFADLANLSHLFLHGNRLRLLTEHVFRGLGSLDRLLLH 211
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
NR+ V A+ LS LT L L +N L +L + + L SL+ LRL+ N
Sbjct: 212 GNRLQGVHRAAFRGLSRLTILYLFNNSLASLPGEALADLPSLEFLRLNAN 261
Score = 133 (51.9 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 39/118 (33%), Positives = 59/118 (50%)
Query: 6 TVRRLSSLKVLSIAHNQ-FSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHL 64
T R L +L+ L + N+ S+ GL++L SL + Q+ L + FR L +L +L
Sbjct: 101 TFRHLQALEELDLGDNRHLRSLEPDTFQGLERLQSLHLYRCQLSSLPGNIFRGLVSLQYL 160
Query: 65 DLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
L N ++ + A L+NL+ L L N LR LT+ + L SL L L N + V
Sbjct: 161 YLQENSLLHLQDDLFADLANLSHLFLHGNRLRLLTEHVFRGLGSLDRLLLHGNRLQGV 218
Score = 102 (41.0 bits), Expect = 0.00019, P = 0.00019
Identities = 37/130 (28%), Positives = 60/130 (46%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR- 70
S + L + +N ++R G G + LT L N + + +FR L L LDL NR
Sbjct: 61 STQRLFLQNNLIRTLRPGTF-GSNLLT-LWLFSNNLSTIYPGTFRHLQALEELDLGDNRH 118
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDN 130
+ ++ + L L +L L L +L ++ L SLQ L L +N + + D+ D
Sbjct: 119 LRSLEPDTFQGLERLQSLHLYRCQLSSLPGNIFRGLVSLQYLYLQENSLLHLQDDLFADL 178
Query: 131 VTITTLTLSG 140
++ L L G
Sbjct: 179 ANLSHLFLHG 188
>RGD|1562655 [details] [associations]
symbol:Tlr13 "toll-like receptor 13" species:10116 "Rattus
norvegicus" [GO:0002237 "response to molecule of bacterial origin"
evidence=IEA] [GO:0002755 "MyD88-dependent toll-like receptor
signaling pathway" evidence=IEA;ISO] [GO:0004888 "transmembrane
signaling receptor activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005768 "endosome" evidence=ISO] [GO:0009615
"response to virus" evidence=ISO] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA;ISO] [GO:0034178 "toll-like receptor 13 signaling
pathway" evidence=IEA;ISO] [GO:0042803 "protein homodimerization
activity" evidence=ISO] [GO:0043408 "regulation of MAPK cascade"
evidence=ISO] [GO:0045087 "innate immune response"
evidence=IEA;ISO] Pfam:PF00560 InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR027196 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 RGD:1562655 GO:GO:0007165
InterPro:IPR003591 SMART:SM00369 GO:GO:0005622 SUPFAM:SSF52200
PANTHER:PTHR24367:SF26 IPI:IPI00362009 Ensembl:ENSRNOT00000038868
Uniprot:F1LYZ1
Length = 987
Score = 150 (57.9 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 39/113 (34%), Positives = 55/113 (48%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L +L +L ++HN+F S A + L +L LS N I L + +F L +L L+LA
Sbjct: 415 LQNLTILDLSHNKFKSFPDFAFSPLKRLEFLSLSRNPITELNNLAFSGLFSLKELNLAAC 474
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
IV + S NL LDL N +R L PLK L L L N + ++
Sbjct: 475 WIVTIDRYSFTQFPNLEVLDLGDNNIRTLNHGTFQPLKKLHTLILSHNRLEIM 527
Score = 135 (52.6 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 37/105 (35%), Positives = 55/105 (52%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
L++ +N + + L L L N I +++ +FR L L+ L+L N+I +V+
Sbjct: 104 LNLTNNYIQVLPPWSFTNLSALVDLRLEWNLIWKIDEGAFRGLENLTLLNLVENKIQSVN 163
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
S LSNL TL LSHN + + +D TPL L+ L L N IS
Sbjct: 164 N-SFEGLSNLETLLLSHNQITHIHKDAFTPLVKLKYLSLSRNRIS 207
Score = 130 (50.8 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 41/122 (33%), Positives = 59/122 (48%)
Query: 1 MSIWC-TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDV-LEDHSFRAL 58
M I C +R L L++L N ++ LA +L L N V L D F AL
Sbjct: 332 MKIVCYLLRNLPMLEILFFHKNATNAEGIKQLAKCTRLLFLDLGQNSDLVHLNDSEFNAL 391
Query: 59 STLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDND 118
+L L+L ++ +S + + L NLT LDLSHN ++ +PLK L+ L L N
Sbjct: 392 PSLQRLNLNKCQLSFISNKTWSSLQNLTILDLSHNKFKSFPDFAFSPLKRLEFLSLSRNP 451
Query: 119 IS 120
I+
Sbjct: 452 IT 453
Score = 126 (49.4 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 41/136 (30%), Positives = 67/136 (49%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
R L +L +L++ N+ SV + GL L +L HNQI + +F L L +L L+
Sbjct: 144 RGLENLTLLNLVENKIQSVNN-SFEGLSNLETLLLSHNQITHIHKDAFTPLVKLKYLSLS 202
Query: 68 HNRIVAVSGA--SLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
NRI SG ++ HL L LDL +N + L + L SL L + N+++ +
Sbjct: 203 RNRISNFSGILEAVQHLPCLEHLDLINNSIMYLDHSPRS-LVSLTHLSFEGNNLTELNFS 261
Query: 126 VIG-DNVTITTLTLSG 140
+ N+T + + +G
Sbjct: 262 TLSLPNLTNLSASQNG 277
Score = 120 (47.3 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 33/109 (30%), Positives = 55/109 (50%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
+L+VL + N ++ G L KL +L HN+++++E ++F L+ L +LDL +N +
Sbjct: 489 NLEVLDLGDNNIRTLNHGTFQPLKKLHTLILSHNRLEIMESNAFSGLTGLRYLDLMYNSL 548
Query: 72 VAVSGASLAHLSNLTTLDLSHNFLR-ALTQDLITP----LKSLQELRLD 115
L L L L N + T+ L P LKSL++L L+
Sbjct: 549 SYFHKHHFMGLEKLLVLKLGFNKITYETTRTLQYPPFMKLKSLKQLNLE 597
Score = 115 (45.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 43/139 (30%), Positives = 65/139 (46%)
Query: 4 WCTVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 63
W + LS+L L + N + GA GL+ LT L+ N+I + ++SF LS L
Sbjct: 117 W-SFTNLSALVDLRLEWNLIWKIDEGAFRGLENLTLLNLVENKIQSV-NNSFEGLSNLET 174
Query: 64 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDL--ITPLKSLQELRLDDNDISM 121
L L+HN+I + + L L L LS N + + L + L L+ L L +N I M
Sbjct: 175 LLLSHNQITHIHKDAFTPLVKLKYLSLSRNRISNFSGILEAVQHLPCLEHLDLINNSI-M 233
Query: 122 VTPDVIGDNVTITTLTLSG 140
V++T L+ G
Sbjct: 234 YLDHSPRSLVSLTHLSFEG 252
Score = 114 (45.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 34/111 (30%), Positives = 52/111 (46%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L+ LS++ N + + A +GL L L+ I ++ +SF L LDL N
Sbjct: 439 LKRLEFLSLSRNPITELNNLAFSGLFSLKELNLAACWIVTIDRYSFTQFPNLEVLDLGDN 498
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
I ++ + L L TL LSHN L + + + L L+ L L N +S
Sbjct: 499 NIRTLNHGTFQPLKKLHTLILSHNRLEIMESNAFSGLTGLRYLDLMYNSLS 549
Score = 113 (44.8 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 35/130 (26%), Positives = 59/130 (45%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L SL+ L++ Q S + + L LT L HN+ D +F L L L L+ N
Sbjct: 391 LPSLQRLNLNKCQLSFISNKTWSSLQNLTILDLSHNKFKSFPDFAFSPLKRLEFLSLSRN 450
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
I ++ + + L +L L+L+ ++ + + T +L+ L L DN+I +
Sbjct: 451 PITELNNLAFSGLFSLKELNLAACWIVTIDRYSFTQFPNLEVLDLGDNNIRTLNHGTFQP 510
Query: 130 NVTITTLTLS 139
+ TL LS
Sbjct: 511 LKKLHTLILS 520
Score = 110 (43.8 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 37/142 (26%), Positives = 61/142 (42%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T + L L L ++HN+ + A +GL L L +N + H F L L L
Sbjct: 507 TFQPLKKLHTLILSHNRLEIMESNAFSGLTGLRYLDLMYNSLSYFHKHHFMGLEKLLVLK 566
Query: 66 LAHNRIVAVSGASLAH-----LSNLTTLDLS--HNFLRALTQDLITPLKSLQELRLDDND 118
L N+I + +L + L +L L+L + ++ + ++ L SLQEL L N
Sbjct: 567 LGFNKITYETTRTLQYPPFMKLKSLKQLNLEGQKHGIQVVPRNFFQGLSSLQELLLGKNP 626
Query: 119 ISMVTPDVIGDNVTITTLTLSG 140
+ + +T L +SG
Sbjct: 627 SVFLDHHQFDPLINLTKLDISG 648
Score = 107 (42.7 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 39/116 (33%), Positives = 59/116 (50%)
Query: 10 LSSLKVLSIAHNQ---FSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
L LK LS++ N+ FS + A+ L L L +N I L DHS R+L +L+HL
Sbjct: 193 LVKLKYLSLSRNRISNFSGILE-AVQHLPCLEHLDLINNSIMYL-DHSPRSLVSLTHLSF 250
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDL-ITPLKSLQELRLDDNDISM 121
N + ++ ++L+ L NLT L S N + QD+ + L LQ L L + +
Sbjct: 251 EGNNLTELNFSTLS-LPNLTNLSASQNG-HGVIQDVYLKTLPQLQSLNLSGTVVKL 304
Score = 103 (41.3 bits), Expect = 0.00023, P = 0.00023
Identities = 34/111 (30%), Positives = 54/111 (48%)
Query: 30 ALAGLDKLTS-LSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTL 88
A++ + + T+ L+ +N I VL SF LS L L L N I + + L NLT L
Sbjct: 93 AISDIPRYTTHLNLTNNYIQVLPPWSFTNLSALVDLRLEWNLIWKIDEGAFRGLENLTLL 152
Query: 89 DLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTLTLS 139
+L N ++++ L +L+ L L N I+ + D V + L+LS
Sbjct: 153 NLVENKIQSVNNSF-EGLSNLETLLLSHNQITHIHKDAFTPLVKLKYLSLS 202
>UNIPROTKB|A6QLV3 [details] [associations]
symbol:SHOC2 "Leucine-rich repeat protein SHOC-2"
species:9913 "Bos taurus" [GO:0019903 "protein phosphatase binding"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0000164 "protein phosphatase type 1
complex" evidence=ISS] [GO:0046579 "positive regulation of Ras
protein signal transduction" evidence=ISS] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR027036 PROSITE:PS51450 GO:GO:0005634
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875
Pfam:PF12799 GO:GO:0046579 GO:GO:0019903 GO:GO:0000164
HOGENOM:HOG000116557 GeneTree:ENSGT00600000084236 EMBL:BC148097
IPI:IPI00729412 RefSeq:NP_001095413.1 UniGene:Bt.72530
ProteinModelPortal:A6QLV3 PRIDE:A6QLV3 Ensembl:ENSBTAT00000010138
GeneID:511417 KEGG:bta:511417 CTD:8036 HOVERGEN:HBG055661
InParanoid:A6QLV3 OMA:LPHGIGN OrthoDB:EOG408N7W NextBio:20869918
ArrayExpress:A6QLV3 PANTHER:PTHR23155:SF38 Uniprot:A6QLV3
Length = 582
Score = 147 (56.8 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 39/133 (29%), Positives = 74/133 (55%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
++ LS L +LSI N+ + + L L +L HNQ++ L + +++LDL
Sbjct: 211 IKNLSKLSMLSIRENKIKQLP-AEIGELCNLITLDVAHNQLEHLPKEIGNC-TQITNLDL 268
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDV 126
HN ++ + ++ +LS+L+ L L +N L A+ + L +L+EL L++N+IS + +
Sbjct: 269 QHNELLDLPD-TIGNLSSLSRLGLRYNRLSAIPRSL-AKCSALEELNLENNNISTLPESL 326
Query: 127 IGDNVTITTLTLS 139
+ V + +LTL+
Sbjct: 327 LSSLVKLNSLTLA 339
Score = 139 (54.0 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 41/129 (31%), Positives = 67/129 (51%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L++L + HN+ + + LD LT+L N+I +E + LS LS L + N
Sbjct: 168 LKKLRMLDLRHNKLREIP-SVVYRLDSLTTLYLRFNRITTVEK-DIKNLSKLSMLSIREN 225
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+I + A + L NL TLD++HN L L ++ I + L L N++ + PD IG+
Sbjct: 226 KIKQLP-AEIGELCNLITLDVAHNQLEHLPKE-IGNCTQITNLDLQHNEL-LDLPDTIGN 282
Query: 130 NVTITTLTL 138
+++ L L
Sbjct: 283 LSSLSRLGL 291
Score = 130 (50.8 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 38/111 (34%), Positives = 60/111 (54%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
V L SL+VL +++N + G L L KL L N+++ L + L L L L
Sbjct: 421 VSGLVSLEVLILSNNLLKKLPHG-LGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVL 478
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
+N++ + + HL+NLT L L N L L +++ T L++L+EL L+DN
Sbjct: 479 TNNQLTTLP-RGIGHLTNLTHLGLGENLLTHLPEEIGT-LENLEELYLNDN 527
Score = 127 (49.8 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 38/136 (27%), Positives = 68/136 (50%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T+ LSSL L + +N+ S++ R +LA L L+ +N I L + +L L+ L
Sbjct: 279 TIGNLSSLSRLGLRYNRLSAIPR-SLAKCSALEELNLENNNISTLPESLLSSLVKLNSLT 337
Query: 66 LAHN--RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVT 123
LA N ++ V G S S + +L++ HN + + + + K L +L + DN ++ +
Sbjct: 338 LARNCFQLYPVGGPS--QFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLP 395
Query: 124 PDVIGDNVTITTLTLS 139
D G ++ L L+
Sbjct: 396 LD-FGTWTSMVELNLA 410
Score = 120 (47.3 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 38/134 (28%), Positives = 66/134 (49%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
++ + S+L+ L++ +N S++ L+ L KL SL+ N + ST+ L+
Sbjct: 302 SLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 361
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
+ HNRI + + L+ L++ N L +L D T S+ EL L N ++ + D
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGT-WTSMVELNLATNQLTKIPED 420
Query: 126 VIGDNVTITTLTLS 139
V G V++ L LS
Sbjct: 421 VSG-LVSLEVLILS 433
Score = 106 (42.4 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 39/129 (30%), Positives = 64/129 (49%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L +L L+++ N +S+ +L L KL L HN++ + +R L +L+ L L N
Sbjct: 145 LVNLMTLALSENSLTSLP-DSLDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFN 202
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
RI V + +LS L+ L + N ++ L + I L +L L + N + + P IG+
Sbjct: 203 RITTVE-KDIKNLSKLSMLSIRENKIKQLPAE-IGELCNLITLDVAHNQLEHL-PKEIGN 259
Query: 130 NVTITTLTL 138
IT L L
Sbjct: 260 CTQITNLDL 268
>UNIPROTKB|Q9UQ13 [details] [associations]
symbol:SHOC2 "Leucine-rich repeat protein SHOC-2"
species:9606 "Homo sapiens" [GO:0008543 "fibroblast growth factor
receptor signaling pathway" evidence=NAS] [GO:0005737 "cytoplasm"
evidence=IDA;NAS] [GO:0007265 "Ras protein signal transduction"
evidence=NAS] [GO:0019888 "protein phosphatase regulator activity"
evidence=TAS] [GO:0019903 "protein phosphatase binding"
evidence=IDA] [GO:0046579 "positive regulation of Ras protein
signal transduction" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0000164 "protein phosphatase type 1 complex"
evidence=IDA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027036
PROSITE:PS51450 GO:GO:0005634 GO:GO:0008543 GO:GO:0007265
GO:GO:0019888 EMBL:CH471066 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 EMBL:AL158163 InterPro:IPR025875 Pfam:PF12799
GO:GO:0046579 GO:GO:0019903 GO:GO:0000164 HOGENOM:HOG000116557
CTD:8036 HOVERGEN:HBG055661 OMA:LPHGIGN OrthoDB:EOG408N7W
PANTHER:PTHR23155:SF38 EMBL:AF068920 EMBL:AF054828 EMBL:AB020669
EMBL:AK090820 EMBL:AK292833 EMBL:BC050445 IPI:IPI00298928
IPI:IPI00479890 RefSeq:NP_001255968.1 RefSeq:NP_031399.2
UniGene:Hs.104315 ProteinModelPortal:Q9UQ13 SMR:Q9UQ13
IntAct:Q9UQ13 STRING:Q9UQ13 PhosphoSite:Q9UQ13 DMDM:14423936
PaxDb:Q9UQ13 PeptideAtlas:Q9UQ13 PRIDE:Q9UQ13
Ensembl:ENST00000265277 Ensembl:ENST00000369452
Ensembl:ENST00000451838 GeneID:8036 KEGG:hsa:8036 UCSC:uc001kzl.4
UCSC:uc001kzn.3 GeneCards:GC10P112679 HGNC:HGNC:15454 HPA:HPA009164
MIM:602775 MIM:607721 neXtProt:NX_Q9UQ13 Orphanet:2701
PharmGKB:PA37960 InParanoid:Q9UQ13 PhylomeDB:Q9UQ13 ChiTaRS:SHOC2
GenomeRNAi:8036 NextBio:30623 Bgee:Q9UQ13 CleanEx:HS_SHOC2
Genevestigator:Q9UQ13 GermOnline:ENSG00000108061 Uniprot:Q9UQ13
Length = 582
Score = 147 (56.8 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 39/133 (29%), Positives = 74/133 (55%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
++ LS L +LSI N+ + + L L +L HNQ++ L + +++LDL
Sbjct: 211 IKNLSKLSMLSIRENKIKQLP-AEIGELCNLITLDVAHNQLEHLPKEIGNC-TQITNLDL 268
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDV 126
HN ++ + ++ +LS+L+ L L +N L A+ + L +L+EL L++N+IS + +
Sbjct: 269 QHNELLDLPD-TIGNLSSLSRLGLRYNRLSAIPRSL-AKCSALEELNLENNNISTLPESL 326
Query: 127 IGDNVTITTLTLS 139
+ V + +LTL+
Sbjct: 327 LSSLVKLNSLTLA 339
Score = 139 (54.0 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 41/129 (31%), Positives = 67/129 (51%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L++L + HN+ + + LD LT+L N+I +E + LS LS L + N
Sbjct: 168 LKKLRMLDLRHNKLREIP-SVVYRLDSLTTLYLRFNRITTVEK-DIKNLSKLSMLSIREN 225
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+I + A + L NL TLD++HN L L ++ I + L L N++ + PD IG+
Sbjct: 226 KIKQLP-AEIGELCNLITLDVAHNQLEHLPKE-IGNCTQITNLDLQHNEL-LDLPDTIGN 282
Query: 130 NVTITTLTL 138
+++ L L
Sbjct: 283 LSSLSRLGL 291
Score = 130 (50.8 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 38/111 (34%), Positives = 60/111 (54%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
V L SL+VL +++N + G L L KL L N+++ L + L L L L
Sbjct: 421 VSGLVSLEVLILSNNLLKKLPHG-LGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVL 478
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
+N++ + + HL+NLT L L N L L +++ T L++L+EL L+DN
Sbjct: 479 TNNQLTTLP-RGIGHLTNLTHLGLGENLLTHLPEEIGT-LENLEELYLNDN 527
Score = 127 (49.8 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 38/136 (27%), Positives = 68/136 (50%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T+ LSSL L + +N+ S++ R +LA L L+ +N I L + +L L+ L
Sbjct: 279 TIGNLSSLSRLGLRYNRLSAIPR-SLAKCSALEELNLENNNISTLPESLLSSLVKLNSLT 337
Query: 66 LAHN--RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVT 123
LA N ++ V G S S + +L++ HN + + + + K L +L + DN ++ +
Sbjct: 338 LARNCFQLYPVGGPS--QFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLP 395
Query: 124 PDVIGDNVTITTLTLS 139
D G ++ L L+
Sbjct: 396 LD-FGTWTSMVELNLA 410
Score = 120 (47.3 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 38/134 (28%), Positives = 66/134 (49%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
++ + S+L+ L++ +N S++ L+ L KL SL+ N + ST+ L+
Sbjct: 302 SLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 361
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
+ HNRI + + L+ L++ N L +L D T S+ EL L N ++ + D
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGT-WTSMVELNLATNQLTKIPED 420
Query: 126 VIGDNVTITTLTLS 139
V G V++ L LS
Sbjct: 421 VSG-LVSLEVLILS 433
Score = 106 (42.4 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 39/129 (30%), Positives = 64/129 (49%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L +L L+++ N +S+ +L L KL L HN++ + +R L +L+ L L N
Sbjct: 145 LVNLMTLALSENSLTSLP-DSLDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFN 202
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
RI V + +LS L+ L + N ++ L + I L +L L + N + + P IG+
Sbjct: 203 RITTVE-KDIKNLSKLSMLSIRENKIKQLPAE-IGELCNLITLDVAHNQLEHL-PKEIGN 259
Query: 130 NVTITTLTL 138
IT L L
Sbjct: 260 CTQITNLDL 268
>UNIPROTKB|F2Z5G0 [details] [associations]
symbol:SHOC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046579 "positive regulation of Ras protein signal
transduction" evidence=IEA] [GO:0019903 "protein phosphatase
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000164 "protein phosphatase type 1 complex" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027036 PROSITE:PS51450
GO:GO:0005634 InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875
Pfam:PF12799 GO:GO:0046579 GO:GO:0000164
GeneTree:ENSGT00600000084236 CTD:8036 OMA:LPHGIGN
PANTHER:PTHR23155:SF38 EMBL:CT737336 RefSeq:XP_001927528.1
UniGene:Ssc.83770 ProteinModelPortal:F2Z5G0 SMR:F2Z5G0 PRIDE:F2Z5G0
Ensembl:ENSSSCT00000011624 GeneID:100155918 KEGG:ssc:100155918
Uniprot:F2Z5G0
Length = 582
Score = 147 (56.8 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 39/133 (29%), Positives = 74/133 (55%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
++ LS L +LSI N+ + + L L +L HNQ++ L + +++LDL
Sbjct: 211 IKNLSKLSMLSIRENKIKQLP-AEIGELCNLITLDVAHNQLEHLPKEIGNC-TQITNLDL 268
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDV 126
HN ++ + ++ +LS+L+ L L +N L A+ + L +L+EL L++N+IS + +
Sbjct: 269 QHNELLDLPD-TIGNLSSLSRLGLRYNRLSAIPRSL-AKCSALEELNLENNNISTLPESL 326
Query: 127 IGDNVTITTLTLS 139
+ V + +LTL+
Sbjct: 327 LSSLVKLNSLTLA 339
Score = 139 (54.0 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 41/129 (31%), Positives = 67/129 (51%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L++L + HN+ + + LD LT+L N+I +E + LS LS L + N
Sbjct: 168 LKKLRMLDLRHNKLREIP-SVVYRLDSLTTLYLRFNRITTVEK-DIKNLSKLSMLSIREN 225
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+I + A + L NL TLD++HN L L ++ I + L L N++ + PD IG+
Sbjct: 226 KIKQLP-AEIGELCNLITLDVAHNQLEHLPKE-IGNCTQITNLDLQHNEL-LDLPDTIGN 282
Query: 130 NVTITTLTL 138
+++ L L
Sbjct: 283 LSSLSRLGL 291
Score = 130 (50.8 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 38/111 (34%), Positives = 60/111 (54%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
V L SL+VL +++N + G L L KL L N+++ L + L L L L
Sbjct: 421 VSGLVSLEVLILSNNLLKKLPHG-LGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVL 478
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
+N++ + + HL+NLT L L N L L +++ T L++L+EL L+DN
Sbjct: 479 TNNQLTTLP-RGIGHLTNLTHLGLGENLLTHLPEEIGT-LENLEELYLNDN 527
Score = 127 (49.8 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 38/136 (27%), Positives = 68/136 (50%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T+ LSSL L + +N+ S++ R +LA L L+ +N I L + +L L+ L
Sbjct: 279 TIGNLSSLSRLGLRYNRLSAIPR-SLAKCSALEELNLENNNISTLPESLLSSLVKLNSLT 337
Query: 66 LAHN--RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVT 123
LA N ++ V G S S + +L++ HN + + + + K L +L + DN ++ +
Sbjct: 338 LARNCFQLYPVGGPS--QFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLP 395
Query: 124 PDVIGDNVTITTLTLS 139
D G ++ L L+
Sbjct: 396 LD-FGTWTSMVELNLA 410
Score = 120 (47.3 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 38/134 (28%), Positives = 66/134 (49%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
++ + S+L+ L++ +N S++ L+ L KL SL+ N + ST+ L+
Sbjct: 302 SLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 361
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
+ HNRI + + L+ L++ N L +L D T S+ EL L N ++ + D
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGT-WTSMVELNLATNQLTKIPED 420
Query: 126 VIGDNVTITTLTLS 139
V G V++ L LS
Sbjct: 421 VSG-LVSLEVLILS 433
Score = 106 (42.4 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 39/129 (30%), Positives = 64/129 (49%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L +L L+++ N +S+ +L L KL L HN++ + +R L +L+ L L N
Sbjct: 145 LVNLMTLALSENSLTSLP-DSLDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFN 202
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
RI V + +LS L+ L + N ++ L + I L +L L + N + + P IG+
Sbjct: 203 RITTVE-KDIKNLSKLSMLSIRENKIKQLPAE-IGELCNLITLDVAHNQLEHL-PKEIGN 259
Query: 130 NVTITTLTL 138
IT L L
Sbjct: 260 CTQITNLDL 268
>UNIPROTKB|Q5RAV5 [details] [associations]
symbol:SHOC2 "Leucine-rich repeat protein SHOC-2"
species:9601 "Pongo abelii" [GO:0000164 "protein phosphatase type 1
complex" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0019903 "protein
phosphatase binding" evidence=ISS] [GO:0046579 "positive regulation
of Ras protein signal transduction" evidence=ISS] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR027036 PROSITE:PS51450 GO:GO:0005634
InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
GO:GO:0046579 GO:GO:0019903 GO:GO:0000164 HSSP:P07359
HOGENOM:HOG000116557 GeneTree:ENSGT00600000084236 CTD:8036
HOVERGEN:HBG055661 OMA:LPHGIGN PANTHER:PTHR23155:SF38 EMBL:CR858906
EMBL:CR860532 EMBL:CR860795 EMBL:CR861437 RefSeq:NP_001126707.1
RefSeq:NP_001128872.1 UniGene:Pab.17963 UniGene:Pab.19685
ProteinModelPortal:Q5RAV5 SMR:Q5RAV5 PRIDE:Q5RAV5
Ensembl:ENSPPYT00000003192 GeneID:100173707 GeneID:100189801
KEGG:pon:100173707 KEGG:pon:100189801 InParanoid:Q5R5R1
Uniprot:Q5RAV5
Length = 582
Score = 147 (56.8 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 39/133 (29%), Positives = 74/133 (55%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
++ LS L +LSI N+ + + L L +L HNQ++ L + +++LDL
Sbjct: 211 IKNLSKLSMLSIRENKIKQLP-AEIGELCNLITLDVAHNQLEHLPKEIGNC-TQITNLDL 268
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDV 126
HN ++ + ++ +LS+L+ L L +N L A+ + L +L+EL L++N+IS + +
Sbjct: 269 QHNELLDLPD-TIGNLSSLSRLGLRYNRLSAIPRSL-AKCSALEELNLENNNISTLPESL 326
Query: 127 IGDNVTITTLTLS 139
+ V + +LTL+
Sbjct: 327 LSSLVKLNSLTLA 339
Score = 139 (54.0 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 41/129 (31%), Positives = 67/129 (51%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L++L + HN+ + + LD LT+L N+I +E + LS LS L + N
Sbjct: 168 LKKLRMLDLRHNKLREIP-SVVYRLDSLTTLYLRFNRITTVEK-DIKNLSKLSMLSIREN 225
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+I + A + L NL TLD++HN L L ++ I + L L N++ + PD IG+
Sbjct: 226 KIKQLP-AEIGELCNLITLDVAHNQLEHLPKE-IGNCTQITNLDLQHNEL-LDLPDTIGN 282
Query: 130 NVTITTLTL 138
+++ L L
Sbjct: 283 LSSLSRLGL 291
Score = 130 (50.8 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 38/111 (34%), Positives = 60/111 (54%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
V L SL+VL +++N + G L L KL L N+++ L + L L L L
Sbjct: 421 VSGLVSLEVLILSNNLLKKLPHG-LGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVL 478
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
+N++ + + HL+NLT L L N L L +++ T L++L+EL L+DN
Sbjct: 479 TNNQLTTLP-RGIGHLTNLTHLGLGENLLTHLPEEIGT-LENLEELYLNDN 527
Score = 127 (49.8 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 38/136 (27%), Positives = 68/136 (50%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T+ LSSL L + +N+ S++ R +LA L L+ +N I L + +L L+ L
Sbjct: 279 TIGNLSSLSRLGLRYNRLSAIPR-SLAKCSALEELNLENNNISTLPESLLSSLVKLNSLT 337
Query: 66 LAHN--RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVT 123
LA N ++ V G S S + +L++ HN + + + + K L +L + DN ++ +
Sbjct: 338 LARNCFQLYPVGGPS--QFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLP 395
Query: 124 PDVIGDNVTITTLTLS 139
D G ++ L L+
Sbjct: 396 LD-FGTWTSMVELNLA 410
Score = 120 (47.3 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 38/134 (28%), Positives = 66/134 (49%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
++ + S+L+ L++ +N S++ L+ L KL SL+ N + ST+ L+
Sbjct: 302 SLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 361
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
+ HNRI + + L+ L++ N L +L D T S+ EL L N ++ + D
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGT-WTSMVELNLATNQLTKIPED 420
Query: 126 VIGDNVTITTLTLS 139
V G V++ L LS
Sbjct: 421 VSG-LVSLEVLILS 433
Score = 106 (42.4 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 39/129 (30%), Positives = 64/129 (49%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L +L L+++ N +S+ +L L KL L HN++ + +R L +L+ L L N
Sbjct: 145 LVNLMTLALSENSLTSLP-DSLDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFN 202
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
RI V + +LS L+ L + N ++ L + I L +L L + N + + P IG+
Sbjct: 203 RITTVE-KDIKNLSKLSMLSIRENKIKQLPAE-IGELCNLITLDVAHNQLEHL-PKEIGN 259
Query: 130 NVTITTLTL 138
IT L L
Sbjct: 260 CTQITNLDL 268
>UNIPROTKB|E2R260 [details] [associations]
symbol:SHOC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046579 "positive regulation of Ras protein
signal transduction" evidence=IEA] [GO:0019903 "protein phosphatase
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000164 "protein phosphatase type 1 complex" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027036 PROSITE:PS51450
GO:GO:0005634 InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875
Pfam:PF12799 GO:GO:0046579 GO:GO:0000164
GeneTree:ENSGT00600000084236 CTD:8036 OMA:LPHGIGN
PANTHER:PTHR23155:SF38 EMBL:AAEX03015529 RefSeq:XP_535013.2
ProteinModelPortal:E2R260 Ensembl:ENSCAFT00000017230 GeneID:477819
KEGG:cfa:477819 NextBio:20853238 Uniprot:E2R260
Length = 582
Score = 147 (56.8 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 39/133 (29%), Positives = 74/133 (55%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
++ LS L +LSI N+ + + L L +L HNQ++ L + +++LDL
Sbjct: 211 IKNLSKLSMLSIRENKIKQLP-AEIGELCNLITLDVAHNQLEHLPKEIGNC-TQITNLDL 268
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDV 126
HN ++ + ++ +LS+L+ L L +N L A+ + L +L+EL L++N+IS + +
Sbjct: 269 QHNELLDLPD-TIGNLSSLSRLGLRYNRLSAIPRSL-AKCSALEELNLENNNISALPESL 326
Query: 127 IGDNVTITTLTLS 139
+ V + +LTL+
Sbjct: 327 LSSLVKLNSLTLA 339
Score = 139 (54.0 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 41/129 (31%), Positives = 67/129 (51%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L++L + HN+ + + LD LT+L N+I +E + LS LS L + N
Sbjct: 168 LKKLRMLDLRHNKLREIP-SVVYRLDSLTTLYLRFNRITTVEK-DIKNLSKLSMLSIREN 225
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+I + A + L NL TLD++HN L L ++ I + L L N++ + PD IG+
Sbjct: 226 KIKQLP-AEIGELCNLITLDVAHNQLEHLPKE-IGNCTQITNLDLQHNEL-LDLPDTIGN 282
Query: 130 NVTITTLTL 138
+++ L L
Sbjct: 283 LSSLSRLGL 291
Score = 130 (50.8 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 38/111 (34%), Positives = 60/111 (54%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
V L SL+VL +++N + G L L KL L N+++ L + L L L L
Sbjct: 421 VSGLVSLEVLILSNNLLKKLPHG-LGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVL 478
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
+N++ + + HL+NLT L L N L L +++ T L++L+EL L+DN
Sbjct: 479 TNNQLTTLP-RGIGHLTNLTHLGLGENLLTHLPEEIGT-LENLEELYLNDN 527
Score = 127 (49.8 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 38/136 (27%), Positives = 68/136 (50%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T+ LSSL L + +N+ S++ R +LA L L+ +N I L + +L L+ L
Sbjct: 279 TIGNLSSLSRLGLRYNRLSAIPR-SLAKCSALEELNLENNNISALPESLLSSLVKLNSLT 337
Query: 66 LAHN--RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVT 123
LA N ++ V G S S + +L++ HN + + + + K L +L + DN ++ +
Sbjct: 338 LARNCFQLYPVGGPS--QFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLP 395
Query: 124 PDVIGDNVTITTLTLS 139
D G ++ L L+
Sbjct: 396 LD-FGTWTSMVELNLA 410
Score = 120 (47.3 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 38/134 (28%), Positives = 66/134 (49%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
++ + S+L+ L++ +N S++ L+ L KL SL+ N + ST+ L+
Sbjct: 302 SLAKCSALEELNLENNNISALPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 361
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
+ HNRI + + L+ L++ N L +L D T S+ EL L N ++ + D
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGT-WTSMVELNLATNQLTKIPED 420
Query: 126 VIGDNVTITTLTLS 139
V G V++ L LS
Sbjct: 421 VSG-LVSLEVLILS 433
Score = 103 (41.3 bits), Expect = 0.00012, P = 0.00012
Identities = 39/129 (30%), Positives = 63/129 (48%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L +L L++ N +S+ +L L KL L HN++ + +R L +L+ L L N
Sbjct: 145 LVNLMTLALNENSLTSLP-DSLDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFN 202
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
RI V + +LS L+ L + N ++ L + I L +L L + N + + P IG+
Sbjct: 203 RITTVE-KDIKNLSKLSMLSIRENKIKQLPAE-IGELCNLITLDVAHNQLEHL-PKEIGN 259
Query: 130 NVTITTLTL 138
IT L L
Sbjct: 260 CTQITNLDL 268
>UNIPROTKB|O75094 [details] [associations]
symbol:SLIT3 "Slit homolog 3 protein" species:9606 "Homo
sapiens" [GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0010629 "negative regulation of gene expression" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=NAS] [GO:0005739
"mitochondrion" evidence=NAS] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IDA] [GO:0050919 "negative chemotaxis"
evidence=IDA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEP] [GO:0032870 "cellular response to hormone
stimulus" evidence=IEP] [GO:0051414 "response to cortisol stimulus"
evidence=IEP] [GO:0048495 "Roundabout binding" evidence=IPI]
[GO:0021834 "chemorepulsion involved in embryonic olfactory bulb
interneuron precursor migration" evidence=IDA] [GO:0007411 "axon
guidance" evidence=IDA;TAS] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IMP] [GO:0030308
"negative regulation of cell growth" evidence=IMP] [GO:0035385
"Roundabout signaling pathway" evidence=IMP] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005739
Reactome:REACT_111045 GO:GO:0008285 GO:GO:0005615 GO:GO:0007420
GO:GO:0030308 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
Pfam:PF01463 GO:GO:0051414 GO:GO:0050919 GO:GO:0035385
GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T EMBL:AB017169 EMBL:AB011538 EMBL:AY358884
EMBL:AC008409 EMBL:AC008479 EMBL:AC011365 EMBL:AC011389
EMBL:AC027311 EMBL:AC094081 EMBL:AC112165 EMBL:BC146759
EMBL:AL122074 EMBL:AF075240 IPI:IPI00409709 IPI:IPI00409710
IPI:IPI00983148 PIR:T34555 RefSeq:NP_003053.1 UniGene:Hs.604116
ProteinModelPortal:O75094 SMR:O75094 IntAct:O75094
MINT:MINT-2797284 STRING:O75094 PhosphoSite:O75094 PaxDb:O75094
PRIDE:O75094 Ensembl:ENST00000404867 Ensembl:ENST00000519560
GeneID:6586 KEGG:hsa:6586 UCSC:uc003mab.3 CTD:6586
GeneCards:GC05M168021 H-InvDB:HIX0005394 HGNC:HGNC:11087
HPA:HPA051630 MIM:603745 neXtProt:NX_O75094 PharmGKB:PA35940
InParanoid:O75094 KO:K06850 PhylomeDB:O75094 ChiTaRS:SLIT3
GenomeRNAi:6586 NextBio:25629 Bgee:O75094 CleanEx:HS_SLIT3
Genevestigator:O75094 GermOnline:ENSG00000184347 Uniprot:O75094
Length = 1523
Score = 152 (58.6 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 37/129 (28%), Positives = 66/129 (51%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L +L+VL + NQ S + RGA L +L L + N++ VL + F++ L+ LDL+ N
Sbjct: 84 LKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSEN 143
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+I + + ++++ L L +N + + L+ L+ L L++N+IS +
Sbjct: 144 QIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNH 203
Query: 130 NVTITTLTL 138
I TL L
Sbjct: 204 MPKIRTLRL 212
Score = 135 (52.6 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 35/110 (31%), Positives = 55/110 (50%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
++L +L+ +++++N+ VR GA G + L NQ++ + FR LS L L L
Sbjct: 554 KKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRVFRGLSGLKTLMLR 613
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
N I VS + A LS++ L L N + +T T L SL + L N
Sbjct: 614 SNLIGCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSN 663
Score = 133 (51.9 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 37/105 (35%), Positives = 53/105 (50%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
LK + I+ NQ S + A GL LTSL + N+I + F L +L L L N+I
Sbjct: 333 LKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIVKGLFDGLVSLQLLLLNANKIN 392
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
+ + L NL L L N L+ +++ L PL+S+Q L L N
Sbjct: 393 CLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQN 437
Score = 123 (48.4 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 30/107 (28%), Positives = 51/107 (47%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
L + N + + + AGL L L NQ+ V+E +F+ L L L L N++ +
Sbjct: 66 LDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLP 125
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
LT LDLS N ++ + + + ++ L+LD+N IS +
Sbjct: 126 ELLFQSTPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCI 172
Score = 123 (48.4 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 34/124 (27%), Positives = 60/124 (48%)
Query: 16 LSIAHNQFSSVRR-GALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAV 74
L + N+ S + G L L ++ +N+I + + +F +++ L L N++ V
Sbjct: 537 LRLNDNEVSVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETV 596
Query: 75 SGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTIT 134
G LS L TL L N + ++ D L S++ L L DN I+ +TP V+++
Sbjct: 597 HGRVFRGLSGLKTLMLRSNLIGCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLS 656
Query: 135 TLTL 138
T+ L
Sbjct: 657 TINL 660
Score = 119 (46.9 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 32/86 (37%), Positives = 49/86 (56%)
Query: 56 RALSTLSHL---DLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQEL 112
R LS L HL DL++N I ++ + +++S+L+TL LS+N LR + L+SL+ L
Sbjct: 769 RELSALRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVL 828
Query: 113 RLDDNDISMVTPDVIGDNVTITTLTL 138
L NDIS V D +++ L L
Sbjct: 829 TLHGNDISSVPEGSFNDLTSLSHLAL 854
Score = 115 (45.5 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 27/80 (33%), Positives = 40/80 (50%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
L ++ NQ + R A G+ + +L +N I +ED +FRAL L L L +N I +
Sbjct: 138 LDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRIL 197
Query: 76 GASLAHLSNLTTLDLSHNFL 95
S H+ + TL L N L
Sbjct: 198 VTSFNHMPKIRTLRLHSNHL 217
Score = 102 (41.0 bits), Expect = 0.00095, P = 0.00095
Identities = 31/124 (25%), Positives = 55/124 (44%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
+ + N ++ GA KL + NQI + +F+ L +L+ L L N+I +
Sbjct: 312 IRLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIV 371
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITT 135
L +L L L+ N + L + L++L L L DN + ++ + +I T
Sbjct: 372 KGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQT 431
Query: 136 LTLS 139
L L+
Sbjct: 432 LHLA 435
Score = 52 (23.4 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 12/40 (30%), Positives = 24/40 (60%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 45
T LSS+++LS+ N+ +++ GA L L++++ N
Sbjct: 624 TFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSN 663
Score = 48 (22.0 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 10/40 (25%), Positives = 21/40 (52%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 47
R L L++L++ +N S + + + K+ +L H N +
Sbjct: 178 RALRDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHL 217
>UNIPROTKB|J3KNP3 [details] [associations]
symbol:SLIT3 "Slit homolog 3 protein" species:9606 "Homo
sapiens" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005576
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 Pfam:PF12661 Pfam:PF01463 EMBL:AC008409
EMBL:AC008479 EMBL:AC011365 EMBL:AC011389 EMBL:AC027311
EMBL:AC094081 EMBL:AC112165 HGNC:HGNC:11087 ChiTaRS:SLIT3
OMA:SVDCHGL ProteinModelPortal:J3KNP3 Ensembl:ENST00000332966
Uniprot:J3KNP3
Length = 1530
Score = 152 (58.6 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 37/129 (28%), Positives = 66/129 (51%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L +L+VL + NQ S + RGA L +L L + N++ VL + F++ L+ LDL+ N
Sbjct: 84 LKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSEN 143
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+I + + ++++ L L +N + + L+ L+ L L++N+IS +
Sbjct: 144 QIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNH 203
Query: 130 NVTITTLTL 138
I TL L
Sbjct: 204 MPKIRTLRL 212
Score = 135 (52.6 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 35/110 (31%), Positives = 55/110 (50%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
++L +L+ +++++N+ VR GA G + L NQ++ + FR LS L L L
Sbjct: 554 KKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRVFRGLSGLKTLMLR 613
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
N I VS + A LS++ L L N + +T T L SL + L N
Sbjct: 614 SNLIGCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSN 663
Score = 133 (51.9 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 37/105 (35%), Positives = 53/105 (50%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
LK + I+ NQ S + A GL LTSL + N+I + F L +L L L N+I
Sbjct: 333 LKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIVKGLFDGLVSLQLLLLNANKIN 392
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
+ + L NL L L N L+ +++ L PL+S+Q L L N
Sbjct: 393 CLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQN 437
Score = 123 (48.4 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 30/107 (28%), Positives = 51/107 (47%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
L + N + + + AGL L L NQ+ V+E +F+ L L L L N++ +
Sbjct: 66 LDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLP 125
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
LT LDLS N ++ + + + ++ L+LD+N IS +
Sbjct: 126 ELLFQSTPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCI 172
Score = 123 (48.4 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 34/124 (27%), Positives = 60/124 (48%)
Query: 16 LSIAHNQFSSVRR-GALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAV 74
L + N+ S + G L L ++ +N+I + + +F +++ L L N++ V
Sbjct: 537 LRLNDNEVSVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETV 596
Query: 75 SGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTIT 134
G LS L TL L N + ++ D L S++ L L DN I+ +TP V+++
Sbjct: 597 HGRVFRGLSGLKTLMLRSNLIGCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLS 656
Query: 135 TLTL 138
T+ L
Sbjct: 657 TINL 660
Score = 119 (46.9 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 32/86 (37%), Positives = 49/86 (56%)
Query: 56 RALSTLSHL---DLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQEL 112
R LS L HL DL++N I ++ + +++S+L+TL LS+N LR + L+SL+ L
Sbjct: 769 RELSALRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVL 828
Query: 113 RLDDNDISMVTPDVIGDNVTITTLTL 138
L NDIS V D +++ L L
Sbjct: 829 TLHGNDISSVPEGSFNDLTSLSHLAL 854
Score = 115 (45.5 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 27/80 (33%), Positives = 40/80 (50%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
L ++ NQ + R A G+ + +L +N I +ED +FRAL L L L +N I +
Sbjct: 138 LDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRIL 197
Query: 76 GASLAHLSNLTTLDLSHNFL 95
S H+ + TL L N L
Sbjct: 198 VTSFNHMPKIRTLRLHSNHL 217
Score = 102 (41.0 bits), Expect = 0.00096, P = 0.00096
Identities = 31/124 (25%), Positives = 55/124 (44%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
+ + N ++ GA KL + NQI + +F+ L +L+ L L N+I +
Sbjct: 312 IRLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIV 371
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITT 135
L +L L L+ N + L + L++L L L DN + ++ + +I T
Sbjct: 372 KGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQT 431
Query: 136 LTLS 139
L L+
Sbjct: 432 LHLA 435
Score = 52 (23.4 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 12/40 (30%), Positives = 24/40 (60%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 45
T LSS+++LS+ N+ +++ GA L L++++ N
Sbjct: 624 TFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSN 663
Score = 48 (22.0 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 10/40 (25%), Positives = 21/40 (52%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 47
R L L++L++ +N S + + + K+ +L H N +
Sbjct: 178 RALRDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHL 217
>UNIPROTKB|F1SRC2 [details] [associations]
symbol:CHADL "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031012 "extracellular matrix" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 OMA:ICDNSRR GeneTree:ENSGT00700000104286
EMBL:CU407312 Ensembl:ENSSSCT00000000073 Uniprot:F1SRC2
Length = 757
Score = 148 (57.2 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 38/112 (33%), Positives = 59/112 (52%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
R L L +L++A N+ S++ + AL GL L L N ++ L +F AL L+ L+LA
Sbjct: 104 RGLGRLLLLNLASNRLSALPQEALDGLGSLRRLELEGNLLEELRPGTFGALGALATLNLA 163
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
HN +V + + L L LSHN L L + + L +L+ L L N++
Sbjct: 164 HNALVYLPPMAFQGLVRARWLQLSHNALSVLAPEALAGLPALRRLSLHHNEL 215
Score = 147 (56.8 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 42/136 (30%), Positives = 62/136 (45%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T L +L L++AHN + A GL + L HN + VL + L L L
Sbjct: 150 TFGALGALATLNLAHNALVYLPPMAFQGLVRARWLQLSHNALSVLAPEALAGLPALRRLS 209
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHN-FLRALTQDLITPLKSLQELRLDDNDISMVTP 124
L HN + ++ G +L+ L L+L HN F A +D + L L+ELRL+ + + P
Sbjct: 210 LHHNELQSLPGLALSQARGLARLELGHNPFTYAGEEDGLA-LPGLRELRLEHGALQALDP 268
Query: 125 DVIGDNVTITTLTLSG 140
+ TL L G
Sbjct: 269 RAFAHCPRLHTLDLRG 284
Score = 124 (48.7 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 34/107 (31%), Positives = 55/107 (51%)
Query: 34 LDKLTS-LSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSH 92
+ +LT L N + V+ +F+ L L+HLDL H ++ V+ + L L L+L+
Sbjct: 57 IPELTQRLDLRGNVLRVIPPAAFQDLPYLTHLDLRHCQVELVAEGAFRGLGRLLLLNLAS 116
Query: 93 NFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTLTLS 139
N L AL Q+ + L SL+ L L+ N + + P G + TL L+
Sbjct: 117 NRLSALPQEALDGLGSLRRLELEGNLLEELRPGTFGALGALATLNLA 163
Score = 123 (48.4 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 38/127 (29%), Positives = 55/127 (43%)
Query: 14 KVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVA 73
++L + N F V R A GL +L SL H I LE + L +L +L L+ N +
Sbjct: 421 QLLDLRRNHFPLVPRAAFQGLGRLVSLHLQHCGITELEAGALAGLGSLIYLYLSDNGLSG 480
Query: 74 VSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTI 133
+S +L L L L N + + L SL L L DN + + P + +
Sbjct: 481 LSATALEGAPRLGYLYLERNRFLQVPGAALGALPSLFSLHLQDNAVDRLAPGDLAGGRAL 540
Query: 134 TTLTLSG 140
L LSG
Sbjct: 541 RWLYLSG 547
Score = 123 (48.4 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 36/129 (27%), Positives = 58/129 (44%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L L + H Q V GA GL +L L+ N++ L + L +L L+L N
Sbjct: 82 LPYLTHLDLRHCQVELVAEGAFRGLGRLLLLNLASNRLSALPQEALDGLGSLRRLELEGN 141
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+ + + L L TL+L+HN L L L + L+L N +S++ P+ +
Sbjct: 142 LLEELRPGTFGALGALATLNLAHNALVYLPPMAFQGLVRARWLQLSHNALSVLAPEALAG 201
Query: 130 NVTITTLTL 138
+ L+L
Sbjct: 202 LPALRRLSL 210
Score = 122 (48.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 33/108 (30%), Positives = 51/108 (47%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L SL+ L + N +R G L L +L+ HN + L +F+ L L L+HN
Sbjct: 130 LGSLRRLELEGNLLEELRPGTFGALGALATLNLAHNALVYLPPMAFQGLVRARWLQLSHN 189
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
+ ++ +LA L L L L HN L++L ++ + L L L N
Sbjct: 190 ALSVLAPEALAGLPALRRLSLHHNELQSLPGLALSQARGLARLELGHN 237
Score = 121 (47.7 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 36/119 (30%), Positives = 55/119 (46%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L L + H + + GALAGL L L N + L + L +L L N
Sbjct: 441 LGRLVSLHLQHCGITELEAGALAGLGSLIYLYLSDNGLSGLSATALEGAPRLGYLYLERN 500
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
R + V GA+L L +L +L L N + L + ++L+ L L N ++ V+P +G
Sbjct: 501 RFLQVPGAALGALPSLFSLHLQDNAVDRLAPGDLAGGRALRWLYLSGNRLTQVSPGALG 559
Score = 120 (47.3 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 34/109 (31%), Positives = 45/109 (41%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
L ++HN S + ALAGL L LS HHN++ L + L+ L+L HN
Sbjct: 184 LQLSHNALSVLAPEALAGLPALRRLSLHHNELQSLPGLALSQARGLARLELGHNPFTYAG 243
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTP 124
L L L L H L+AL L L L N + + P
Sbjct: 244 EEDGLALPGLRELRLEHGALQALDPRAFAHCPRLHTLDLRGNQLDALLP 292
Score = 103 (41.3 bits), Expect = 0.00017, P = 0.00017
Identities = 31/89 (34%), Positives = 41/89 (46%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L +L+ LS+ HN+ S+ AL+ L L HN + AL L L L H
Sbjct: 202 LPALRRLSLHHNELQSLPGLALSQARGLARLELGHNPFTYAGEEDGLALPGLRELRLEHG 261
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRAL 98
+ A+ + AH L TLDL N L AL
Sbjct: 262 ALQALDPRAFAHCPRLHTLDLRGNQLDAL 290
Score = 103 (41.3 bits), Expect = 0.00017, P = 0.00017
Identities = 37/131 (28%), Positives = 58/131 (44%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L SL L ++ N S + AL G +L L N+ + + AL +L L L N
Sbjct: 465 LGSLIYLYLSDNGLSGLSATALEGAPRLGYLYLERNRFLQVPGAALGALPSLFSLHLQDN 524
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+ ++ LA L L LS N L ++ + P + L++L LD N + V + +
Sbjct: 525 AVDRLAPGDLAGGRALRWLYLSGNRLTQVSPGALGPAQELEKLHLDRNQLPEVPTEALEG 584
Query: 130 NVTITTLTLSG 140
+ L LSG
Sbjct: 585 LPALLELQLSG 595
>RGD|628615 [details] [associations]
symbol:Lgr4 "leucine-rich repeat-containing G protein-coupled
receptor 4" species:10116 "Rattus norvegicus" [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0030539 "male genitalia development"
evidence=IEA;ISO] [GO:0035239 "tube morphogenesis" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0050673
"epithelial cell proliferation" evidence=IEA;ISO] [GO:0061290
"canonical Wnt receptor signaling pathway involved in metanephric
kidney development" evidence=IEA;ISO] [GO:0072202 "cell
differentiation involved in metanephros development"
evidence=IEA;ISO] [GO:0072224 "metanephric glomerulus development"
evidence=IEA;ISO] [GO:0072282 "metanephric nephron tubule
morphogenesis" evidence=IEA;ISO] [GO:0090190 "positive regulation
of branching involved in ureteric bud morphogenesis"
evidence=IEA;ISO] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 InterPro:IPR017452
Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373 PROSITE:PS00237
PROSITE:PS50262 PROSITE:PS51450 EMBL:AF061443 RGD:628615
GO:GO:0016021 GO:GO:0005886 GO:GO:0045892 GO:GO:0045893
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030539
GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 GO:GO:0061290 GO:GO:0072282 CTD:55366
HOVERGEN:HBG031675 KO:K04309 OrthoDB:EOG476JZH GO:GO:0072202
GO:GO:0072224 HOGENOM:HOG000231829 IPI:IPI00339207
RefSeq:NP_775450.1 UniGene:Rn.162671 ProteinModelPortal:Q9Z2H4
PhosphoSite:Q9Z2H4 GeneID:286994 KEGG:rno:286994 UCSC:RGD:628615
InParanoid:Q9Z2H4 NextBio:625274 ArrayExpress:Q9Z2H4
Genevestigator:Q9Z2H4 GermOnline:ENSRNOG00000005715 Uniprot:Q9Z2H4
Length = 951
Score = 149 (57.5 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 44/129 (34%), Positives = 65/129 (50%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L+ L + N + V L+ L L +L+ N I + D +F LS+L L L +N
Sbjct: 152 LVQLRHLWLDDNSLTEVPVRPLSNLPTLQALTLALNNISSIPDFAFTNLSSLVVLHLHNN 211
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+I ++S L NL TLDL++N+L Q I L SL+EL N IS++ G
Sbjct: 212 KIKSLSQHCFDGLDNLETLDLNYNYLDEFPQ-AIKALPSLKELGFHSNSISVIPDGAFGG 270
Query: 130 NVTITTLTL 138
N + T+ L
Sbjct: 271 NPLLRTIHL 279
Score = 139 (54.0 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 42/130 (32%), Positives = 61/130 (46%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L LKVL++ +NQ +V A+ GL L SL N I + + SF L L HL L N
Sbjct: 104 LKELKVLTLQNNQLRTVPSEAIHGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDN 163
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+ V L++L L L L+ N + ++ T L SL L L +N I ++
Sbjct: 164 SLTEVPVRPLSNLPTLQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDG 223
Query: 130 NVTITTLTLS 139
+ TL L+
Sbjct: 224 LDNLETLDLN 233
Score = 121 (47.7 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 39/120 (32%), Positives = 58/120 (48%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
L+ L +A N S + AL+GL +L L+ +NQ+ + + LS L L L N I
Sbjct: 83 LEELQLAGNDLSLIHPKALSGLKELKVLTLQNNQLRTVPSEAIHGLSALQSLRLDANHIT 142
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVT 132
+V S L L L L N L + ++ L +LQ L L N+IS + PD N++
Sbjct: 143 SVPEDSFEGLVQLRHLWLDDNSLTEVPVRPLSNLPTLQALTLALNNISSI-PDFAFTNLS 201
Score = 120 (47.3 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 33/94 (35%), Positives = 47/94 (50%)
Query: 33 GLDKLT-SLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLS 91
GL T +L N I L + +F++ L L LA N + + +L+ L L L L
Sbjct: 54 GLSAFTQALDISMNNITQLPEDAFKSFPFLEELQLAGNDLSLIHPKALSGLKELKVLTLQ 113
Query: 92 HNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
+N LR + + I L +LQ LRLD N I+ V D
Sbjct: 114 NNQLRTVPSEAIHGLSALQSLRLDANHITSVPED 147
Score = 118 (46.6 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 31/107 (28%), Positives = 57/107 (53%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
L+ L +++N + + G L +S NQI ++++++F+ L++L LDL+ N I
Sbjct: 345 LRTLDLSYNNIRDLP--SFNGCRALEEISLQRNQISLIKENTFQGLTSLRILDLSRNLIR 402
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRAL-TQDL--ITPLKSLQELRLDD 116
+ + A L +T LD+S N L + T+ L + LK + +L D
Sbjct: 403 EIHSGAFAKLGTITNLDVSFNELTSFPTEGLNGLNQLKLVGNFKLKD 449
>UNIPROTKB|Q9Z2H4 [details] [associations]
symbol:Lgr4 "Leucine-rich repeat-containing G-protein
coupled receptor 4" species:10116 "Rattus norvegicus" [GO:0016500
"protein-hormone receptor activity" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450 EMBL:AF061443
RGD:628615 GO:GO:0016021 GO:GO:0005886 GO:GO:0045892 GO:GO:0045893
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030539
GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 GO:GO:0061290 GO:GO:0072282 CTD:55366
HOVERGEN:HBG031675 KO:K04309 OrthoDB:EOG476JZH GO:GO:0072202
GO:GO:0072224 HOGENOM:HOG000231829 IPI:IPI00339207
RefSeq:NP_775450.1 UniGene:Rn.162671 ProteinModelPortal:Q9Z2H4
PhosphoSite:Q9Z2H4 GeneID:286994 KEGG:rno:286994 UCSC:RGD:628615
InParanoid:Q9Z2H4 NextBio:625274 ArrayExpress:Q9Z2H4
Genevestigator:Q9Z2H4 GermOnline:ENSRNOG00000005715 Uniprot:Q9Z2H4
Length = 951
Score = 149 (57.5 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 44/129 (34%), Positives = 65/129 (50%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L+ L + N + V L+ L L +L+ N I + D +F LS+L L L +N
Sbjct: 152 LVQLRHLWLDDNSLTEVPVRPLSNLPTLQALTLALNNISSIPDFAFTNLSSLVVLHLHNN 211
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+I ++S L NL TLDL++N+L Q I L SL+EL N IS++ G
Sbjct: 212 KIKSLSQHCFDGLDNLETLDLNYNYLDEFPQ-AIKALPSLKELGFHSNSISVIPDGAFGG 270
Query: 130 NVTITTLTL 138
N + T+ L
Sbjct: 271 NPLLRTIHL 279
Score = 139 (54.0 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 42/130 (32%), Positives = 61/130 (46%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L LKVL++ +NQ +V A+ GL L SL N I + + SF L L HL L N
Sbjct: 104 LKELKVLTLQNNQLRTVPSEAIHGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDN 163
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+ V L++L L L L+ N + ++ T L SL L L +N I ++
Sbjct: 164 SLTEVPVRPLSNLPTLQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDG 223
Query: 130 NVTITTLTLS 139
+ TL L+
Sbjct: 224 LDNLETLDLN 233
Score = 121 (47.7 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 39/120 (32%), Positives = 58/120 (48%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
L+ L +A N S + AL+GL +L L+ +NQ+ + + LS L L L N I
Sbjct: 83 LEELQLAGNDLSLIHPKALSGLKELKVLTLQNNQLRTVPSEAIHGLSALQSLRLDANHIT 142
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVT 132
+V S L L L L N L + ++ L +LQ L L N+IS + PD N++
Sbjct: 143 SVPEDSFEGLVQLRHLWLDDNSLTEVPVRPLSNLPTLQALTLALNNISSI-PDFAFTNLS 201
Score = 120 (47.3 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 33/94 (35%), Positives = 47/94 (50%)
Query: 33 GLDKLT-SLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLS 91
GL T +L N I L + +F++ L L LA N + + +L+ L L L L
Sbjct: 54 GLSAFTQALDISMNNITQLPEDAFKSFPFLEELQLAGNDLSLIHPKALSGLKELKVLTLQ 113
Query: 92 HNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
+N LR + + I L +LQ LRLD N I+ V D
Sbjct: 114 NNQLRTVPSEAIHGLSALQSLRLDANHITSVPED 147
Score = 118 (46.6 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 31/107 (28%), Positives = 57/107 (53%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
L+ L +++N + + G L +S NQI ++++++F+ L++L LDL+ N I
Sbjct: 345 LRTLDLSYNNIRDLP--SFNGCRALEEISLQRNQISLIKENTFQGLTSLRILDLSRNLIR 402
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRAL-TQDL--ITPLKSLQELRLDD 116
+ + A L +T LD+S N L + T+ L + LK + +L D
Sbjct: 403 EIHSGAFAKLGTITNLDVSFNELTSFPTEGLNGLNQLKLVGNFKLKD 449
>ZFIN|ZDB-GENE-050208-523 [details] [associations]
symbol:shoc2 "soc-2 suppressor of clear homolog (C.
elegans)" species:7955 "Danio rerio" [GO:0000164 "protein
phosphatase type 1 complex" evidence=IEA;ISS] [GO:0046579 "positive
regulation of Ras protein signal transduction" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0019903 "protein
phosphatase binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027036
PROSITE:PS51450 ZFIN:ZDB-GENE-050208-523 GO:GO:0005634
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875
Pfam:PF12799 GO:GO:0046579 EMBL:CR450802 GO:GO:0019903
GO:GO:0000164 HOGENOM:HOG000116557 GeneTree:ENSGT00600000084236
CTD:8036 OMA:LPHGIGN OrthoDB:EOG408N7W PANTHER:PTHR23155:SF38
EMBL:AL772158 EMBL:BC125839 EMBL:BC155579 IPI:IPI00487368
IPI:IPI00817688 RefSeq:NP_001038251.1 UniGene:Dr.68831
ProteinModelPortal:Q1L8Y7 Ensembl:ENSDART00000059882
Ensembl:ENSDART00000125215 GeneID:555476 KEGG:dre:555476
InParanoid:Q1L8Y7 NextBio:20880997 Bgee:Q1L8Y7 Uniprot:Q1L8Y7
Length = 561
Score = 146 (56.5 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 38/133 (28%), Positives = 75/133 (56%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
++ LS L +LSI N+ + + L L +L HNQ++ L + +++LDL
Sbjct: 190 IKNLSKLTMLSIRENKIKQLP-AEIGELCNLITLDVAHNQLEHLPKEIGNC-TQITNLDL 247
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDV 126
HN ++ + ++ +L+++ L L +N L A+ + L + L+EL L++N+IS++ +
Sbjct: 248 QHNDLLDLP-ETIGNLASINRLGLRYNRLSAIPRSL-AKCRELEELNLENNNISVLPEGL 305
Query: 127 IGDNVTITTLTLS 139
+ V +T+LTL+
Sbjct: 306 LSSLVNLTSLTLA 318
Score = 130 (50.8 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 39/129 (30%), Positives = 65/129 (50%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L++L + HN+ + + + LT+L N+I +E + LS L+ L + N
Sbjct: 147 LKKLRMLDLRHNKLREIP-AVVYRVSSLTTLYLRFNRITTVEK-DIKNLSKLTMLSIREN 204
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+I + A + L NL TLD++HN L L ++ I + L L ND+ + P+ IG+
Sbjct: 205 KIKQLP-AEIGELCNLITLDVAHNQLEHLPKE-IGNCTQITNLDLQHNDL-LDLPETIGN 261
Query: 130 NVTITTLTL 138
+I L L
Sbjct: 262 LASINRLGL 270
Score = 124 (48.7 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 34/108 (31%), Positives = 61/108 (56%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L SL++L++++N + G + L KL L N+++ L + L L L L +N
Sbjct: 403 LVSLEMLTLSNNLLKKLPYG-IGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVLTNN 460
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
++ + + HL+NLT L L N L+ L +++ T L++L++L L+DN
Sbjct: 461 QLTTLP-RGIGHLTNLTYLGLGENLLQHLPEEIGT-LENLEDLYLNDN 506
Score = 123 (48.4 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 34/134 (25%), Positives = 67/134 (50%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T+ L+S+ L + +N+ S++ R +LA +L L+ +N I VL + +L L+ L
Sbjct: 258 TIGNLASINRLGLRYNRLSAIPR-SLAKCRELEELNLENNNISVLPEGLLSSLVNLTSLT 316
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
LA N + + S + +L++ HN + + + + K L +L + DN ++ + D
Sbjct: 317 LARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD 376
Query: 126 VIGDNVTITTLTLS 139
G ++ L L+
Sbjct: 377 -FGTWTSMVELNLA 389
Score = 121 (47.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 39/116 (33%), Positives = 59/116 (50%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
V R+SSL L + N+ ++V + + L KLT LS N+I L L L LD+
Sbjct: 167 VYRVSSLTTLYLRFNRITTVEKD-IKNLSKLTMLSIRENKIKQLPAE-IGELCNLITLDV 224
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
AHN++ + + + + +T LDL HN L L + I L S+ L L N +S +
Sbjct: 225 AHNQLEHLP-KEIGNCTQITNLDLQHNDLLDLPET-IGNLASINRLGLRYNRLSAI 278
Score = 115 (45.5 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 33/112 (29%), Positives = 59/112 (52%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLE-DHSFRALSTLSHLD 65
+ L +L L +AHNQ + + + ++T+L HN D+L+ + L++++ L
Sbjct: 213 IGELCNLITLDVAHNQLEHLPK-EIGNCTQITNLDLQHN--DLLDLPETIGNLASINRLG 269
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
L +NR+ A+ SLA L L+L +N + L + L++ L +L L L N
Sbjct: 270 LRYNRLSAIP-RSLAKCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARN 320
Score = 113 (44.8 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 41/129 (31%), Positives = 65/129 (50%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
LS L L+++ N +S+ +L L KL L HN++ + +R +S+L+ L L N
Sbjct: 124 LSGLVTLALSENSLTSLP-DSLDNLKKLRMLDLRHNKLREIPAVVYR-VSSLTTLYLRFN 181
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
RI V + +LS LT L + N ++ L + I L +L L + N + + P IG+
Sbjct: 182 RITTVE-KDIKNLSKLTMLSIRENKIKQLPAE-IGELCNLITLDVAHNQLEHL-PKEIGN 238
Query: 130 NVTITTLTL 138
IT L L
Sbjct: 239 CTQITNLDL 247
>TAIR|locus:2171963 [details] [associations]
symbol:RLP55 "receptor like protein 55" species:3702
"Arabidopsis thaliana" [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006863 "purine nucleobase transport" evidence=RCA]
InterPro:IPR001611 PROSITE:PS51450 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AB012245 IPI:IPI00546089
RefSeq:NP_199389.1 UniGene:At.28004 ProteinModelPortal:Q9FK66
SMR:Q9FK66 PaxDb:Q9FK66 PRIDE:Q9FK66 EnsemblPlants:AT5G45770.1
GeneID:834616 KEGG:ath:AT5G45770 TAIR:At5g45770 eggNOG:NOG280143
HOGENOM:HOG000082852 InParanoid:Q9FK66 OMA:IRISITR PhylomeDB:Q9FK66
ProtClustDB:CLSN2916889 Genevestigator:Q9FK66 Uniprot:Q9FK66
Length = 425
Score = 144 (55.7 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 44/133 (33%), Positives = 66/133 (49%)
Query: 9 RLSSLKVLSIAHNQFSSVRR--GALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
RL +LK L I+ + RR L + KLTSL+ ++ + L SF S L ++DL
Sbjct: 143 RLKNLKTLYISSTPIQTSRRLYVILGNMHKLTSLTISNSNLTGLIPKSFH--SNLRYIDL 200
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDV 126
++N + S+ L NL +L+LSHN L + I L L+ L L N +S P+
Sbjct: 201 SNNSLKGSIRISITRLKNLKSLNLSHNSLSGQIPNKIKSLTFLKNLSLASNKLSGTIPNS 260
Query: 127 IGDNVTITTLTLS 139
+ +T L LS
Sbjct: 261 LSSISELTHLDLS 273
Score = 143 (55.4 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 35/114 (30%), Positives = 58/114 (50%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
S+L+ + +++N R ++ L L SL+ HN + + ++L+ L +L LA N+
Sbjct: 193 SNLRYIDLSNNSLKGSIRISITRLKNLKSLNLSHNSLSGQIPNKIKSLTFLKNLSLASNK 252
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTP 124
+ SL+ +S LT LDLS N L + +K+L+ L L DN V P
Sbjct: 253 LSGTIPNSLSSISELTHLDLSMNQLNGTVPSFFSEMKNLKHLNLADNSFHGVLP 306
Score = 119 (46.9 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 34/135 (25%), Positives = 64/135 (47%)
Query: 2 SIWCTVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTL 61
SI ++ RL +LK L+++HN S + L L +LS N++ +S ++S L
Sbjct: 208 SIRISITRLKNLKSLNLSHNSLSGQIPNKIKSLTFLKNLSLASNKLSGTIPNSLSSISEL 267
Query: 62 SHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISM 121
+HLDL+ N++ + + + NL L+L+ N + + +K+L + N
Sbjct: 268 THLDLSMNQLNGTVPSFFSEMKNLKHLNLADNSFHGVLPFNESFIKNLNFFEIGRNSELC 327
Query: 122 VTPDVIGDNVTITTL 136
V+ N+ + L
Sbjct: 328 YNKTVLSSNLKLEGL 342
>UNIPROTKB|Q2I0M4 [details] [associations]
symbol:LRRC26 "Leucine-rich repeat-containing protein 26"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0015459 "potassium channel regulator activity"
evidence=IDA] [GO:0008076 "voltage-gated potassium channel complex"
evidence=IDA] GO:GO:0005737 GO:GO:0005856 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0008076
GO:GO:0015459 GO:GO:0005216 InterPro:IPR000372 SMART:SM00013
EMBL:AL929554 EMBL:DQ355157 EMBL:EU588721 EMBL:BC140911
IPI:IPI00374551 IPI:IPI00973389 RefSeq:NP_001013675.1
UniGene:Hs.669977 ProteinModelPortal:Q2I0M4 SMR:Q2I0M4
STRING:Q2I0M4 PhosphoSite:Q2I0M4 DMDM:160410009 PaxDb:Q2I0M4
PRIDE:Q2I0M4 Ensembl:ENST00000371542 GeneID:389816 KEGG:hsa:389816
UCSC:uc004clp.2 CTD:389816 GeneCards:GC09M140063 H-InvDB:HIX0035220
HGNC:HGNC:31409 MIM:613505 neXtProt:NX_Q2I0M4 PharmGKB:PA134952867
eggNOG:NOG235918 HOGENOM:HOG000113367 HOVERGEN:HBG096585
InParanoid:Q2I0M4 OMA:DAAFSHC OrthoDB:EOG4V438G ChiTaRS:LRRC26
GenomeRNAi:389816 NextBio:103112 Bgee:Q2I0M4 CleanEx:HS_LRRC26
Genevestigator:Q2I0M4 Uniprot:Q2I0M4
Length = 334
Score = 142 (55.0 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 38/128 (29%), Positives = 62/128 (48%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
L+ L + HN+ ++ GA AG L L N + + +F L L LDL+ N++
Sbjct: 73 LRALLLDHNRVRALPPGAFAGAGALQRLDLRENGLHSVHVRAFWGLGALQLLDLSANQLE 132
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVT 132
A++ + A L L L L+ N L L + L L+ L L DN+++ + P ++G
Sbjct: 133 ALAPGTFAPLRALRNLSLAGNRLARLEPAALGALPLLRSLSLQDNELAALAPGLLGRLPA 192
Query: 133 ITTLTLSG 140
+ L L G
Sbjct: 193 LDALHLRG 200
Score = 122 (48.0 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 37/106 (34%), Positives = 50/106 (47%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
+L+ L + N SV A GL L L NQ++ L +F L L +L LA NR+
Sbjct: 96 ALQRLDLRENGLHSVHVRAFWGLGALQLLDLSANQLEALAPGTFAPLRALRNLSLAGNRL 155
Query: 72 VAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
+ A+L L L +L L N L AL L+ L +L L L N
Sbjct: 156 ARLEPAALGALPLLRSLSLQDNELAALAPGLLGRLPALDALHLRGN 201
Score = 121 (47.7 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 34/107 (31%), Positives = 52/107 (48%)
Query: 33 GLD-KLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLS 91
GL +L +L HN++ L +F L LDL N + +V + L L LDLS
Sbjct: 68 GLSLRLRALLLDHNRVRALPPGAFAGAGALQRLDLRENGLHSVHVRAFWGLGALQLLDLS 127
Query: 92 HNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTLTL 138
N L AL PL++L+ L L N ++ + P +G + +L+L
Sbjct: 128 ANQLEALAPGTFAPLRALRNLSLAGNRLARLEPAALGALPLLRSLSL 174
>MGI|MGI:2389177 [details] [associations]
symbol:Lrrtm3 "leucine rich repeat transmembrane neuronal 3"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=ISS] [GO:0030054 "cell junction" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:1902004 "positive regulation of
beta-amyloid formation" evidence=ISO;IMP] InterPro:IPR001611
PROSITE:PS51450 MGI:MGI:2389177 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GeneTree:ENSGT00700000104056 HOGENOM:HOG000290681
HOVERGEN:HBG052362 CTD:347731 OMA:PCTYSKS OrthoDB:EOG45TCMT
EMBL:AY182029 EMBL:AK032485 EMBL:AK035773 EMBL:AK035858
EMBL:AK035882 EMBL:AK036366 EMBL:AK163753 EMBL:BC113178
EMBL:BC113784 IPI:IPI00266935 IPI:IPI00607982 RefSeq:NP_848793.1
UniGene:Mm.431318 ProteinModelPortal:Q8BZ81 SMR:Q8BZ81
STRING:Q8BZ81 PhosphoSite:Q8BZ81 PaxDb:Q8BZ81 PRIDE:Q8BZ81
Ensembl:ENSMUST00000105439 GeneID:216028 KEGG:mmu:216028
UCSC:uc007fkk.1 UCSC:uc007fkl.1 InParanoid:Q14CH3 NextBio:374957
Bgee:Q8BZ81 CleanEx:MM_LRRTM3 Genevestigator:Q8BZ81
GermOnline:ENSMUSG00000042846 Uniprot:Q8BZ81
Length = 582
Score = 146 (56.5 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 37/131 (28%), Positives = 72/131 (54%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
+L++L + +N+ S+ R AG+ +L L HNQ L F L +L +L + N+I
Sbjct: 182 NLELLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRLVSLQNLYMQWNKI 241
Query: 72 VAVSGASLAHL-SNLTTLDLSHNFLRALT-QDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+V G +++ S+L LDLS N + A + + + +LQ L LD N ++ + +++
Sbjct: 242 -SVIGQTMSWTWSSLQRLDLSGNEIEAFSGPSVFQCVPNLQRLNLDSNKLTFIGQEILDS 300
Query: 130 NVTITTLTLSG 140
+++ ++L+G
Sbjct: 301 WISLNDISLAG 311
Score = 140 (54.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 35/123 (28%), Positives = 59/123 (47%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
LS+ +N ++ GL++LT L HN I +++++F + L L L+ NRI
Sbjct: 66 LSLRYNSLQKLKYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFL 125
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITT 135
+ ++NL LDLS+N L +L + L+ L L L N + + + D +
Sbjct: 126 NNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLEL 185
Query: 136 LTL 138
L L
Sbjct: 186 LDL 188
Score = 139 (54.0 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 42/135 (31%), Positives = 64/135 (47%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T R +++L+ L +++NQ S+ GL KL SL N + + F+ L LD
Sbjct: 128 TFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLELLD 187
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
L +NRI +++ A + L L L HN L L L SLQ L + N IS++
Sbjct: 188 LGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRLVSLQNLYMQWNKISVIGQT 247
Query: 126 VIGDNVTITTLTLSG 140
+ ++ L LSG
Sbjct: 248 MSWTWSSLQRLDLSG 262
Score = 130 (50.8 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 34/129 (26%), Positives = 63/129 (48%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L+ L L + HN S++ A G+ +L L N+I +++FR ++ L +LDL++N
Sbjct: 84 LNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFLNNTFRPVTNLRNLDLSYN 143
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
++ ++ L L +L L N LR + + ++L+ L L N I + +V
Sbjct: 144 QLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLELLDLGYNRIRSLARNVFAG 203
Query: 130 NVTITTLTL 138
+ + L L
Sbjct: 204 MIRLKELHL 212
Score = 116 (45.9 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 31/108 (28%), Positives = 49/108 (45%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
LK L ++ N+ S + L +L +NQ+ L FR L L L L N +
Sbjct: 111 LKELILSSNRISYFLNNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLR 170
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
+ NL LDL +N +R+L +++ + L+EL L+ N S
Sbjct: 171 TIPVRIFQDCRNLELLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFS 218
>RGD|1304866 [details] [associations]
symbol:Lrrtm3 "leucine rich repeat transmembrane neuronal 3"
species:10116 "Rattus norvegicus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
RGD:1304866 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GeneTree:ENSGT00700000104056 EMBL:CH473988 CTD:347731
OrthoDB:EOG45TCMT IPI:IPI00869756 RefSeq:NP_001099857.1
UniGene:Rn.214114 Ensembl:ENSRNOT00000033980 GeneID:294380
KEGG:rno:294380 UCSC:RGD:1304866 NextBio:638086 Uniprot:D3ZAL8
Length = 582
Score = 146 (56.5 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 37/131 (28%), Positives = 72/131 (54%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
+L++L + +N+ S+ R AG+ +L L HNQ L F L +L +L + N+I
Sbjct: 182 NLELLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRLVSLQNLYMQWNKI 241
Query: 72 VAVSGASLAHL-SNLTTLDLSHNFLRALT-QDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+V G +++ S+L LDLS N + A + + + +LQ L LD N ++ + +++
Sbjct: 242 -SVIGQTMSWTWSSLQRLDLSGNEIEAFSGPSVFQCVPNLQRLNLDSNKLTFIGQEILDS 300
Query: 130 NVTITTLTLSG 140
+++ ++L+G
Sbjct: 301 WISLNDISLAG 311
Score = 140 (54.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 35/123 (28%), Positives = 59/123 (47%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
LS+ +N ++ GL++LT L HN I +++++F + L L L+ NRI
Sbjct: 66 LSLRYNSLQKLKYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFL 125
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITT 135
+ ++NL LDLS+N L +L + L+ L L L N + + + D +
Sbjct: 126 NNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLEL 185
Query: 136 LTL 138
L L
Sbjct: 186 LDL 188
Score = 139 (54.0 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 42/135 (31%), Positives = 64/135 (47%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T R +++L+ L +++NQ S+ GL KL SL N + + F+ L LD
Sbjct: 128 TFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLELLD 187
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
L +NRI +++ A + L L L HN L L L SLQ L + N IS++
Sbjct: 188 LGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRLVSLQNLYMQWNKISVIGQT 247
Query: 126 VIGDNVTITTLTLSG 140
+ ++ L LSG
Sbjct: 248 MSWTWSSLQRLDLSG 262
Score = 130 (50.8 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 34/129 (26%), Positives = 63/129 (48%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L+ L L + HN S++ A G+ +L L N+I +++FR ++ L +LDL++N
Sbjct: 84 LNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFLNNTFRPVTNLRNLDLSYN 143
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
++ ++ L L +L L N LR + + ++L+ L L N I + +V
Sbjct: 144 QLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLELLDLGYNRIRSLARNVFAG 203
Query: 130 NVTITTLTL 138
+ + L L
Sbjct: 204 MIRLKELHL 212
Score = 116 (45.9 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 31/108 (28%), Positives = 49/108 (45%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
LK L ++ N+ S + L +L +NQ+ L FR L L L L N +
Sbjct: 111 LKELILSSNRISYFLNNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLR 170
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
+ NL LDL +N +R+L +++ + L+EL L+ N S
Sbjct: 171 TIPVRIFQDCRNLELLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFS 218
>UNIPROTKB|Q6UY18 [details] [associations]
symbol:LINGO4 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 4" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 EMBL:AL589765
HSSP:Q9BZR6 HOGENOM:HOG000246971 HOVERGEN:HBG057546 EMBL:AY358115
IPI:IPI00258050 RefSeq:NP_001004432.1 UniGene:Hs.591477
ProteinModelPortal:Q6UY18 SMR:Q6UY18 STRING:Q6UY18
PhosphoSite:Q6UY18 DMDM:74762377 PRIDE:Q6UY18
Ensembl:ENST00000368820 GeneID:339398 KEGG:hsa:339398
UCSC:uc001ezf.1 CTD:339398 GeneCards:GC01M151775 HGNC:HGNC:31814
MIM:609794 neXtProt:NX_Q6UY18 PharmGKB:PA162394098 eggNOG:NOG306417
InParanoid:Q6UY18 OMA:EPPNGTL OrthoDB:EOG49KFQ7 GenomeRNAi:339398
NextBio:97381 Bgee:Q6UY18 CleanEx:HS_LINGO4 Genevestigator:Q6UY18
Uniprot:Q6UY18
Length = 593
Score = 146 (56.5 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 39/125 (31%), Positives = 61/125 (48%)
Query: 14 KVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVA 73
++L ++ N+ +++G L+ L L L +NQ+ LE +F L +L L L NR+
Sbjct: 63 ELLDLSGNRLWGLQQGMLSRLSLLQELDLSYNQLSTLEPGAFHGLQSLLTLRLQGNRLRI 122
Query: 74 VSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTI 133
+ + LS LT LDL N + L SLQ+L + DN + V P +
Sbjct: 123 MGPGVFSGLSALTLLDLRLNQIVLFLDGAFGELGSLQKLEVGDNHLVFVAPGAFAGLAKL 182
Query: 134 TTLTL 138
+TLTL
Sbjct: 183 STLTL 187
Score = 134 (52.2 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 36/114 (31%), Positives = 57/114 (50%)
Query: 9 RLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 68
RLS L+ L +++NQ S++ GA GL L +L N++ ++ F LS L+ LDL
Sbjct: 82 RLSLLQELDLSYNQLSTLEPGAFHGLQSLLTLRLQGNRLRIMGPGVFSGLSALTLLDLRL 141
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
N+IV + L +L L++ N L + L L L L+ ++S V
Sbjct: 142 NQIVLFLDGAFGELGSLQKLEVGDNHLVFVAPGAFAGLAKLSTLTLERCNLSTV 195
Score = 123 (48.4 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 38/107 (35%), Positives = 54/107 (50%)
Query: 9 RLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCH-HNQIDVLEDHSFRALSTLSHLDLA 67
RL +L L + + GAL GL +L L H ++ L+ S L+ LS L +
Sbjct: 202 RLPALVALRLRELDIGRLPAGALRGLGQLKELEIHLWPSLEALDPGSLVGLN-LSSLAIT 260
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRL 114
+ +V +L HLS L LDLS N + A+ ++PL LQELRL
Sbjct: 261 RCNLSSVPFQALYHLSFLRVLDLSQNPISAIPARRLSPLVRLQELRL 307
Score = 121 (47.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 36/110 (32%), Positives = 54/110 (49%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L SL L + N+ + G +GL LT L NQI + D +F L +L L++ N
Sbjct: 107 LQSLLTLRLQGNRLRIMGPGVFSGLSALTLLDLRLNQIVLFLDGAFGELGSLQKLEVGDN 166
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
+V V+ + A L+ L+TL L L + + L +L LRL + DI
Sbjct: 167 HLVFVAPGAFAGLAKLSTLTLERCNLSTVPGLALARLPALVALRLRELDI 216
>RGD|1564145 [details] [associations]
symbol:Lrrn1 "leucine rich repeat neuronal 1" species:10116
"Rattus norvegicus" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 RGD:1564145 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 CTD:57633 GeneTree:ENSGT00690000102097
HOGENOM:HOG000252914 HOVERGEN:HBG052361 OMA:GINNMGE
OrthoDB:EOG4XKV6G EMBL:BC107902 IPI:IPI00191618
RefSeq:NP_001032440.1 UniGene:Rn.96330 ProteinModelPortal:Q32Q07
STRING:Q32Q07 PhosphoSite:Q32Q07 Ensembl:ENSRNOT00000008879
GeneID:500280 KEGG:rno:500280 UCSC:RGD:1564145 InParanoid:Q32Q07
NextBio:705687 Genevestigator:Q32Q07 GermOnline:ENSRNOG00000006802
Uniprot:Q32Q07
Length = 716
Score = 147 (56.8 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 33/113 (29%), Positives = 61/113 (53%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
+++L +L L + N F++++ LA L +LT+L NQI + D+ + LS L L +
Sbjct: 91 LQQLFNLTELDFSQNNFTNIKEVGLANLTQLTTLHLEENQISEMTDYCLQDLSNLQELYI 150
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
HN+I ++S + + L NL L L+ N L+ + +L+ L + +N +
Sbjct: 151 NHNQISSISANAFSGLKNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGENPV 203
Score = 144 (55.7 bits), Expect = 6.3e-09, P = 6.3e-09
Identities = 37/122 (30%), Positives = 64/122 (52%)
Query: 1 MSIWCTVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALST 60
M+ +C ++ LS+L+ L I HNQ SS+ A +GL L L + N++ V++ F +
Sbjct: 134 MTDYC-LQDLSNLQELYINHNQISSISANAFSGLKNLLRLHLNSNKLKVIDSRWFDSTPN 192
Query: 61 LSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
L L + N ++ + + LSNL +L L+ +L + + + L SL+ L DN +
Sbjct: 193 LEILMIGENPVIGILDMNFRPLSNLRSLVLAGMYLTDIPGNALVGLDSLESLSFYDNKLI 252
Query: 121 MV 122
V
Sbjct: 253 KV 254
Score = 105 (42.0 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 25/82 (30%), Positives = 41/82 (50%)
Query: 58 LSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
L L+ LD + N + LA+L+ LTTL L N + +T + L +LQEL ++ N
Sbjct: 94 LFNLTELDFSQNNFTNIKEVGLANLTQLTTLHLEENQISEMTDYCLQDLSNLQELYINHN 153
Query: 118 DISMVTPDVIGDNVTITTLTLS 139
IS ++ + + L L+
Sbjct: 154 QISSISANAFSGLKNLLRLHLN 175
>TAIR|locus:2012633 [details] [associations]
symbol:AT1G33670 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0007165
"signal transduction" evidence=IC] Pfam:PF00560 InterPro:IPR001611
EMBL:CP002684 eggNOG:COG4886 InterPro:IPR013210 Pfam:PF08263
ProtClustDB:CLSN2679289 EMBL:DQ056476 IPI:IPI00528081
RefSeq:NP_174628.1 UniGene:At.51908 ProteinModelPortal:Q4PT10
SMR:Q4PT10 PRIDE:Q4PT10 EnsemblPlants:AT1G33670.1 GeneID:840258
KEGG:ath:AT1G33670 OMA:IEYLHLS ArrayExpress:Q4PT10
Genevestigator:Q4PT10 Uniprot:Q4PT10
Length = 455
Score = 144 (55.7 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 40/131 (30%), Positives = 67/131 (51%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
LS+L++LS+A N+FS +++ L L L + N++ + F+++ L LDL+ N
Sbjct: 151 LSNLEILSVAGNRFSGSIPSSMSKLTSLLQLKLNGNRLSGIFPDIFKSMRQLRFLDLSSN 210
Query: 70 RIVAVSGASLAHLS-NLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
R +S+A L+ L+TL++ HN L D ++ + L L L N + V P
Sbjct: 211 RFSGNLPSSIASLAPTLSTLEVGHNKLSGTIPDYLSRFELLSALNLSRNGYTGVVPMSFA 270
Query: 129 DNVTITTLTLS 139
+ I L LS
Sbjct: 271 NLTNIIFLDLS 281
Score = 111 (44.1 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 30/90 (33%), Positives = 49/90 (54%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGL-DKLTSLSCHHNQID-VLEDHSFRALSTLSHLD 65
+ + L+ L ++ N+FS ++A L L++L HN++ + D+ R LS L+
Sbjct: 197 KSMRQLRFLDLSSNRFSGNLPSSIASLAPTLSTLEVGHNKLSGTIPDYLSR-FELLSALN 255
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFL 95
L+ N V S A+L+N+ LDLSHN L
Sbjct: 256 LSRNGYTGVVPMSFANLTNIIFLDLSHNLL 285
>FB|FBgn0262473 [details] [associations]
symbol:Tl "Toll" species:7227 "Drosophila melanogaster"
[GO:0019730 "antimicrobial humoral response" evidence=IGI]
[GO:0019732 "antifungal humoral response" evidence=IMP] [GO:0006963
"positive regulation of antibacterial peptide biosynthetic process"
evidence=IMP] [GO:0006967 "positive regulation of antifungal
peptide biosynthetic process" evidence=IMP] [GO:0004888
"transmembrane signaling receptor activity" evidence=IEA;NAS]
[GO:0008063 "Toll signaling pathway" evidence=IEA;NAS] [GO:0005887
"integral to plasma membrane" evidence=NAS] [GO:0006952 "defense
response" evidence=NAS;TAS] [GO:0009950 "dorsal/ventral axis
specification" evidence=IMP;NAS;TAS] [GO:0030097 "hemopoiesis"
evidence=TAS] [GO:0007416 "synapse assembly" evidence=IMP]
[GO:0006955 "immune response" evidence=TAS] [GO:0009620 "response
to fungus" evidence=TAS] [GO:0016021 "integral to membrane"
evidence=NAS] [GO:0009880 "embryonic pattern specification"
evidence=TAS] [GO:0070976 "TIR domain binding" evidence=IPI]
[GO:0009617 "response to bacterium" evidence=NAS] [GO:0050832
"defense response to fungus" evidence=TAS] [GO:0045087 "innate
immune response" evidence=IDA;NAS;TAS] [GO:0019955 "cytokine
binding" evidence=TAS] [GO:0050830 "defense response to
Gram-positive bacterium" evidence=IEA;TAS] [GO:0035007 "regulation
of melanization defense response" evidence=TAS] [GO:0035172
"hemocyte proliferation" evidence=IMP;TAS] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0007352 "zygotic specification of
dorsal/ventral axis" evidence=IEA;NAS] [GO:0045610 "regulation of
hemocyte differentiation" evidence=IMP] [GO:0007507 "heart
development" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043234 "protein complex" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0033565 "ESCRT-0
complex" evidence=IDA] [GO:0016201 "synaptic target inhibition"
evidence=IMP] [GO:0009897 "external side of plasma membrane"
evidence=IDA] Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR027202 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 EMBL:AE014297 GO:GO:0016021 GO:GO:0007507
GO:GO:0009897 GO:GO:0050830 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007155
GO:GO:0045087 GO:GO:0000910 GO:GO:0007416 GO:GO:0019732
GO:GO:0030097 GO:GO:0019955 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0004888 GO:GO:0008063 GO:GO:0006963
GO:GO:0035172 GO:GO:0006967 GeneTree:ENSGT00700000104286
GO:GO:0007352 GO:GO:0045610 GO:GO:0033565 SUPFAM:SSF52200
GO:GO:0016201 EMBL:M19969 EMBL:BT031153 EMBL:AY349649 EMBL:AY349650
EMBL:AY349651 EMBL:AY349652 EMBL:AY349653 EMBL:AY349654
EMBL:AY349655 EMBL:AY121616 PIR:A29943 RefSeq:NP_524518.1
RefSeq:NP_733166.1 UniGene:Dm.2347 ProteinModelPortal:P08953
SMR:P08953 DIP:DIP-34358N IntAct:P08953 STRING:P08953 PaxDb:P08953
PRIDE:P08953 EnsemblMetazoa:FBtr0085059 EnsemblMetazoa:FBtr0330155
GeneID:43222 KEGG:dme:Dmel_CG5490 CTD:109651 FlyBase:FBgn0262473
InParanoid:P08953 OMA:STNDICP OrthoDB:EOG4SF7MS PhylomeDB:P08953
ChiTaRS:Tl GenomeRNAi:43222 NextBio:832799 Bgee:P08953
GermOnline:CG5490 PANTHER:PTHR24371:SF0 Uniprot:P08953
Length = 1097
Score = 149 (57.5 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 35/114 (30%), Positives = 58/114 (50%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L +L+ + N+ + RG + KL L+ NQ+ L H F +++ +D+ N
Sbjct: 196 LENLESIEFGSNKLRQMPRGIFGKMPKLKQLNLWSNQLHNLTKHDFEGATSVLGIDIHDN 255
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVT 123
I + AHL+N+T ++LS N R+L Q L K L E+RL +N + + T
Sbjct: 256 GIEQLPHDVFAHLTNVTDINLSANLFRSLPQGLFDHNKHLNEVRLMNNRVPLAT 309
Score = 126 (49.4 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 33/109 (30%), Positives = 50/109 (45%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
+S+ N ++ L L SL +N++ L D F + L+ L L N + +S
Sbjct: 347 ISLGDNLLKTLPATLLEHQVNLLSLDLSNNRLTHLPDSLFAHTTNLTDLRLEDNLLTGIS 406
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTP 124
G ++L NL TL +S N LR + L+ L LD NDI + P
Sbjct: 407 GDIFSNLGNLVTLVMSRNRLRTIDSRAFVSTNGLRHLHLDHNDIDLQQP 455
Score = 109 (43.4 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 26/94 (27%), Positives = 48/94 (51%)
Query: 46 QIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITP 105
++ L F + ++++ L N + + L H NL +LDLS+N L L L
Sbjct: 329 ELQSLPGDLFEHSTQITNISLGDNLLKTLPATLLEHQVNLLSLDLSNNRLTHLPDSLFAH 388
Query: 106 LKSLQELRLDDNDISMVTPDVIGDNVTITTLTLS 139
+L +LRL+DN ++ ++ D+ + + TL +S
Sbjct: 389 TTNLTDLRLEDNLLTGISGDIFSNLGNLVTLVMS 422
>RGD|2336 [details] [associations]
symbol:Chad "chondroadherin" species:10116 "Rattus norvegicus"
[GO:0001502 "cartilage condensation" evidence=IEP] [GO:0005578
"proteinaceous extracellular matrix" evidence=TAS] InterPro:IPR001611
PROSITE:PS51450 RGD:2336 GO:GO:0005578 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0001502 CTD:1101
HOGENOM:HOG000013150 HOVERGEN:HBG005324 KO:K06248 OrthoDB:EOG4K9BCM
OMA:CHCHGGD EMBL:AF004953 IPI:IPI00196534 RefSeq:NP_062037.1
UniGene:Rn.9899 ProteinModelPortal:O70210 STRING:O70210
Ensembl:ENSRNOT00000004435 GeneID:29195 KEGG:rno:29195 UCSC:RGD:2336
GeneTree:ENSGT00700000104056 InParanoid:O70210 NextBio:608331
Genevestigator:O70210 GermOnline:ENSRNOG00000003304 Uniprot:O70210
Length = 358
Score = 142 (55.0 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 39/122 (31%), Positives = 60/122 (49%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
R + +L L + H V GA GL +L L HN I VL +F L+ L++L L
Sbjct: 71 RTVPNLVSLHLQHCNIREVAAGAFRGLKQLIYLYLSHNDIRVLRAGAFDDLTELTYLYLD 130
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI 127
HN++ + L+ L NL L L++N +R L K L+ L L +N ++ + P +
Sbjct: 131 HNKVSELPRGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDLRWLYLSENALTSLHPGSL 190
Query: 128 GD 129
D
Sbjct: 191 DD 192
Score = 130 (50.8 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 34/106 (32%), Positives = 55/106 (51%)
Query: 14 KVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVA 73
K+L++ N F + + + L SL H I + +FR L L +L L+HN I
Sbjct: 53 KLLNLQRNNFPVLAANSFRTVPNLVSLHLQHCNIREVAAGAFRGLKQLIYLYLSHNDIRV 112
Query: 74 VSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
+ + L+ LT L L HN + L + L++PL +L L+L++N I
Sbjct: 113 LRAGAFDDLTELTYLYLDHNKVSELPRGLLSPLVNLFILQLNNNKI 158
Score = 127 (49.8 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 34/116 (29%), Positives = 58/116 (50%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L+ L L + HN+ S + RG L+ L L L ++N+I L +F+ L L L+ N
Sbjct: 121 LTELTYLYLDHNKVSELPRGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDLRWLYLSEN 180
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
+ ++ SL + NL L N L + ++ L+ ++EL+L N + + PD
Sbjct: 181 ALTSLHPGSLDDVENLAKFHLDRNQLSSYPSAALSKLRVVEELKLSHNPLKSI-PD 235
Score = 115 (45.5 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 37/132 (28%), Positives = 57/132 (43%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
R L L L ++HN +R GA L +LT L HN++ L L L L L
Sbjct: 95 RGLKQLIYLYLSHNDIRVLRAGAFDDLTELTYLYLDHNKVSELPRGLLSPLVNLFILQLN 154
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI 127
+N+I + + +L L LS N L +L + +++L + LD N +S +
Sbjct: 155 NNKIRELRAGAFQGAKDLRWLYLSENALTSLHPGSLDDVENLAKFHLDRNQLSSYPSAAL 214
Query: 128 GDNVTITTLTLS 139
+ L LS
Sbjct: 215 SKLRVVEELKLS 226
Score = 107 (42.7 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 32/100 (32%), Positives = 44/100 (44%)
Query: 40 LSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALT 99
L+ N VL +SFR + L L L H I V+ + L L L LSHN +R L
Sbjct: 55 LNLQRNNFPVLAANSFRTVPNLVSLHLQHCNIREVAAGAFRGLKQLIYLYLSHNDIRVLR 114
Query: 100 QDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTLTLS 139
L L L LD N +S + ++ V + L L+
Sbjct: 115 AGAFDDLTELTYLYLDHNKVSELPRGLLSPLVNLFILQLN 154
>UNIPROTKB|Q6NUI6 [details] [associations]
symbol:CHADL "Chondroadherin-like protein" species:9606
"Homo sapiens" [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] [GO:0031012 "extracellular matrix" evidence=ISS]
InterPro:IPR001611 PROSITE:PS51450 EMBL:CH471095 GO:GO:0005578
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 SMART:SM00013 EMBL:AL035681 EMBL:BC012882
EMBL:BC019839 EMBL:BC040188 EMBL:BC048421 EMBL:BC068590
IPI:IPI00402280 IPI:IPI00855816 RefSeq:NP_612490.1
UniGene:Hs.344488 HSSP:Q9BZR6 ProteinModelPortal:Q6NUI6 SMR:Q6NUI6
DMDM:158563972 PaxDb:Q6NUI6 PRIDE:Q6NUI6 Ensembl:ENST00000216241
GeneID:150356 KEGG:hsa:150356 UCSC:uc003azq.4 UCSC:uc010gyj.3
CTD:150356 GeneCards:GC22M041625 HGNC:HGNC:25165 HPA:HPA005696
HPA:HPA024654 neXtProt:NX_Q6NUI6 PharmGKB:PA162382224
eggNOG:NOG318740 HOGENOM:HOG000111626 HOVERGEN:HBG095510
InParanoid:Q6NUI6 OMA:ICDNSRR GenomeRNAi:150356 NextBio:86414
ArrayExpress:Q6NUI6 Bgee:Q6NUI6 CleanEx:HS_CHADL
Genevestigator:Q6NUI6 Uniprot:Q6NUI6
Length = 762
Score = 147 (56.8 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 40/131 (30%), Positives = 63/131 (48%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
R L L +L++A N + + AL GL L L N ++ L +F AL L+ L+LA
Sbjct: 107 RGLGRLLLLNLASNHLRELPQEALDGLGSLRRLELEGNALEELRPGTFGALGALATLNLA 166
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI 127
HN +V + + L + L LSHN L L + + L +L+ L L N++ + V+
Sbjct: 167 HNALVYLPAMAFQGLLRVRWLRLSHNALSVLAPEALAGLPALRRLSLHHNELQALPGPVL 226
Query: 128 GDNVTITTLTL 138
+ L L
Sbjct: 227 SQARGLARLEL 237
Score = 142 (55.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 41/135 (30%), Positives = 59/135 (43%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T L +L L++AHN + A GL ++ L HN + VL + L L L
Sbjct: 153 TFGALGALATLNLAHNALVYLPAMAFQGLLRVRWLRLSHNALSVLAPEALAGLPALRRLS 212
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
L HN + A+ G L+ L L+L HN L ++ L L+EL LD + + P
Sbjct: 213 LHHNELQALPGPVLSQARGLARLELGHNPLTYAGEEDGLALPGLRELLLDGGALQALGPR 272
Query: 126 VIGDNVTITTLTLSG 140
+ TL L G
Sbjct: 273 AFAHCPRLHTLDLRG 287
Score = 138 (53.6 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 41/130 (31%), Positives = 58/130 (44%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
S ++L + N F SV R A GL L SL H I LE + L L +L L+ N+
Sbjct: 425 SDTQLLDLRRNHFPSVPRAAFPGLGHLVSLHLQHCGIAELEAGALAGLGRLIYLYLSDNQ 484
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDN 130
+ +S A+L L L L N + + L SL L L DN + + P +G
Sbjct: 485 LAGLSAAALEGAPRLGYLYLERNRFLQVPGAALRALPSLFSLHLQDNAVDRLAPGDLGRT 544
Query: 131 VTITTLTLSG 140
+ + LSG
Sbjct: 545 RALRWVYLSG 554
Score = 132 (51.5 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 34/111 (30%), Positives = 55/111 (49%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L SL+ L + N +R G L L +L+ HN + L +F+ L + L L+HN
Sbjct: 133 LGSLRRLELEGNALEELRPGTFGALGALATLNLAHNALVYLPAMAFQGLLRVRWLRLSHN 192
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
+ ++ +LA L L L L HN L+AL +++ + L L L N ++
Sbjct: 193 ALSVLAPEALAGLPALRRLSLHHNELQALPGPVLSQARGLARLELGHNPLT 243
Score = 127 (49.8 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 33/107 (30%), Positives = 54/107 (50%)
Query: 34 LDKLTS-LSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSH 92
+ +LT L N + V+ +F+ + L+HLDL H + V+ + L L L+L+
Sbjct: 60 IPELTQRLDLQGNLLKVIPAAAFQGVPHLTHLDLRHCEVELVAEGAFRGLGRLLLLNLAS 119
Query: 93 NFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTLTLS 139
N LR L Q+ + L SL+ L L+ N + + P G + TL L+
Sbjct: 120 NHLRELPQEALDGLGSLRRLELEGNALEELRPGTFGALGALATLNLA 166
Score = 121 (47.7 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 34/123 (27%), Positives = 56/123 (45%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
L + H + V GA GL +L L+ N + L + L +L L+L N + +
Sbjct: 91 LDLRHCEVELVAEGAFRGLGRLLLLNLASNHLRELPQEALDGLGSLRRLELEGNALEELR 150
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITT 135
+ L L TL+L+HN L L L ++ LRL N +S++ P+ + +
Sbjct: 151 PGTFGALGALATLNLAHNALVYLPAMAFQGLLRVRWLRLSHNALSVLAPEALAGLPALRR 210
Query: 136 LTL 138
L+L
Sbjct: 211 LSL 213
Score = 115 (45.5 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 36/119 (30%), Positives = 56/119 (47%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L L + H + + GALAGL +L L NQ+ L + L +L L N
Sbjct: 448 LGHLVSLHLQHCGIAELEAGALAGLGRLIYLYLSDNQLAGLSAAALEGAPRLGYLYLERN 507
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
R + V GA+L L +L +L L N + L + ++L+ + L N I+ V+ +G
Sbjct: 508 RFLQVPGAALRALPSLFSLHLQDNAVDRLAPGDLGRTRALRWVYLSGNRITEVSLGALG 566
Score = 109 (43.4 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 34/115 (29%), Positives = 47/115 (40%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L ++ L ++HN S + ALAGL L LS HHN++ L L+ L+L HN
Sbjct: 181 LLRVRWLRLSHNALSVLAPEALAGLPALRRLSLHHNELQALPGPVLSQARGLARLELGHN 240
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTP 124
+ L L L L L+AL L L L N + + P
Sbjct: 241 PLTYAGEEDGLALPGLRELLLDGGALQALGPRAFAHCPRLHTLDLRGNQLDTLPP 295
Score = 104 (41.7 bits), Expect = 0.00013, P = 0.00013
Identities = 34/131 (25%), Positives = 57/131 (43%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L L ++ NQ + + AL G +L L N+ + + RAL +L L L N
Sbjct: 472 LGRLIYLYLSDNQLAGLSAAALEGAPRLGYLYLERNRFLQVPGAALRALPSLFSLHLQDN 531
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+ ++ L L + LS N + ++ + P + L++L LD N + V +
Sbjct: 532 AVDRLAPGDLGRTRALRWVYLSGNRITEVSLGALGPARELEKLHLDRNQLREVPTGALEG 591
Query: 130 NVTITTLTLSG 140
+ L LSG
Sbjct: 592 LPALLELQLSG 602
>ZFIN|ZDB-GENE-040220-5 [details] [associations]
symbol:tlr22 "toll-like receptor 22" species:7955
"Danio rerio" [GO:0007165 "signal transduction" evidence=IEA]
[GO:0052033 "pathogen-associated molecular pattern dependent
induction by symbiont of host innate immune response" evidence=IDA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0009617 "response to bacterium"
evidence=IDA] Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
ZFIN:ZDB-GENE-040220-5 GO:GO:0016021 GO:GO:0007165 GO:GO:0009617
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005622 InterPro:IPR025875 Pfam:PF12799 GO:GO:0052033
InterPro:IPR026906 Pfam:PF13306 SUPFAM:SSF52200 EMBL:BC163527
IPI:IPI00898178 RefSeq:NP_001122147.1 UniGene:Dr.30190
ProteinModelPortal:B3DJL6 STRING:B3DJL6 GeneID:403135
KEGG:dre:403135 CTD:403135 HOVERGEN:HBG055859 NextBio:20816896
Uniprot:B3DJL6
Length = 947
Score = 148 (57.2 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 38/115 (33%), Positives = 64/115 (55%)
Query: 6 TVRRL-SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHL 64
T+ R+ ++ +L I+ N F+ ++ L L L L+ +N+I ++D +F +L L+ L
Sbjct: 52 TIPRVPNNTWILDISFNSFAQIQIEDLNILLNLQYLNVSNNKISKIQDGAFGSLFNLTDL 111
Query: 65 DLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
+LA NR+ AVS L L+NL L L N++ + + + L SLQ L L N +
Sbjct: 112 NLASNRLNAVSNGMLRGLTNLLVLRLDRNYISVIKESAFSTLHSLQVLNLSKNHL 166
Score = 126 (49.4 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 35/119 (29%), Positives = 62/119 (52%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
S L L + N+ S++ + G +L L N++ + + SF+ L++L +DL+ N
Sbjct: 329 SELSELDLGGNEISNLSQSMFRGFKQLKKLQLQINKLTRVTN-SFQILTSLEFIDLSRNH 387
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
I +S A+L+ + TL L N + ++ L LKSL+ LRL N++ + DV +
Sbjct: 388 IHKLSCNDFANLTQVKTLYLYSNKISSIRSCLFKDLKSLEVLRLGTNNLLKID-DVFSN 445
Score = 125 (49.1 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 37/120 (30%), Positives = 61/120 (50%)
Query: 5 CTVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHL 64
C + L SL+VL + N + G L L +N++ +++ H+F L L++L
Sbjct: 418 CLFKDLKSLEVLRLGTNNLLKIDDVFSNGPYFLKELQLSYNKLSLIKSHTFGNLPQLNNL 477
Query: 65 DLAHNRIVAVSGASLAHLSNLTTLDLSHNFL--RALTQ--DLITPLKSLQELRLDDNDIS 120
L N+I + G + L NLT+L LS N + + LT ++ + + +LQ L L N IS
Sbjct: 478 SLEDNQISEIEGYAFGGLENLTSLFLSSNKITGKTLTTHPNVFSGMPNLQNLDLFANSIS 537
Score = 110 (43.8 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 34/130 (26%), Positives = 57/130 (43%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L+SL+ + ++ N + A L ++ +L + N+I + F+ L +L L L N
Sbjct: 375 LTSLEFIDLSRNHIHKLSCNDFANLTQVKTLYLYSNKISSIRSCLFKDLKSLEVLRLGTN 434
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
++ + L L LS+N L + L L L L+DN IS + G
Sbjct: 435 NLLKIDDVFSNGPYFLKELQLSYNKLSLIKSHTFGNLPQLNNLSLEDNQISEIEGYAFGG 494
Query: 130 NVTITTLTLS 139
+T+L LS
Sbjct: 495 LENLTSLFLS 504
Score = 109 (43.4 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 28/100 (28%), Positives = 49/100 (49%)
Query: 40 LSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALT 99
L N ++ L L +L++++N+I + + L NLT L+L+ N L A++
Sbjct: 63 LDISFNSFAQIQIEDLNILLNLQYLNVSNNKISKIQDGAFGSLFNLTDLNLASNRLNAVS 122
Query: 100 QDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTLTLS 139
++ L +L LRLD N IS++ ++ L LS
Sbjct: 123 NGMLRGLTNLLVLRLDRNYISVIKESAFSTLHSLQVLNLS 162
>RGD|69311 [details] [associations]
symbol:Slit3 "slit homolog 3 (Drosophila)" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=IEA;ISO] [GO:0007411 "axon guidance" evidence=ISO]
[GO:0007420 "brain development" evidence=IEP] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA;ISO] [GO:0009887
"organ morphogenesis" evidence=IEA;ISO] [GO:0010629 "negative
regulation of gene expression" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0021510 "spinal cord development"
evidence=IEP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA;ISO]
[GO:0032870 "cellular response to hormone stimulus"
evidence=IEA;ISO] [GO:0035385 "Roundabout signaling pathway"
evidence=IEA;ISO] [GO:0048495 "Roundabout binding" evidence=IEA;ISO]
[GO:0048846 "axon extension involved in axon guidance"
evidence=IEA;ISO] [GO:0050919 "negative chemotaxis"
evidence=IEA;ISO] [GO:0051414 "response to cortisol stimulus"
evidence=IEA;ISO] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA;ISO] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA;ISO] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0021834 "chemorepulsion involved
in embryonic olfactory bulb interneuron precursor migration"
evidence=ISO] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:69311 GO:GO:0008285 GO:GO:0005615
GO:GO:0007420 GO:GO:0016020 GO:GO:0030308 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887
PROSITE:PS01186 GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791
SMART:SM00282 PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
GO:GO:0070100 Pfam:PF12661 Pfam:PF01463 GO:GO:0051414 GO:GO:0050919
GO:GO:0035385 GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T CTD:6586 KO:K06850 EMBL:AB011531 IPI:IPI00207574
PIR:T13953 RefSeq:NP_112611.1 UniGene:Rn.12298
ProteinModelPortal:O88280 SMR:O88280 IntAct:O88280 STRING:O88280
PRIDE:O88280 GeneID:83467 KEGG:rno:83467 UCSC:RGD:69311
InParanoid:O88280 NextBio:615863 ArrayExpress:O88280
Genevestigator:O88280 GermOnline:ENSRNOG00000007377 Uniprot:O88280
Length = 1523
Score = 150 (57.9 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 37/129 (28%), Positives = 65/129 (50%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L +L+VL + NQ S + RGA L +L L + N++ VL + F++ L+ LDL+ N
Sbjct: 84 LKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSEN 143
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+I + + ++ + L L +N + + L+ L+ L L++N+IS +
Sbjct: 144 QIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNH 203
Query: 130 NVTITTLTL 138
I TL L
Sbjct: 204 MPKIRTLRL 212
Score = 134 (52.2 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 37/105 (35%), Positives = 53/105 (50%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
LK + I+ NQ S + A GL LTSL + N+I + F L +L L L N+I
Sbjct: 333 LKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKIN 392
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
+ + L NL L L N L+ +++ L PL+S+Q L L N
Sbjct: 393 CLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQN 437
Score = 129 (50.5 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 33/110 (30%), Positives = 55/110 (50%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
++L +L+ +++++N+ VR GA G + L NQ++ + FR LS L L L
Sbjct: 554 KKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRGLSGLKTLMLR 613
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
N I V+ + A LS++ L L N + ++ T L SL + L N
Sbjct: 614 SNLISCVNNDTFAGLSSVRLLSLYDNRITTISPGAFTTLVSLSTINLLSN 663
Score = 118 (46.6 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 29/107 (27%), Positives = 50/107 (46%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
L + N + + + GL L L NQ+ V+E +F+ L L L L N++ +
Sbjct: 66 LDLDRNNITRITKMDFTGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLP 125
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
LT LDLS N ++ + + + ++ L+LD+N IS +
Sbjct: 126 ELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCI 172
Score = 116 (45.9 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 37/109 (33%), Positives = 60/109 (55%)
Query: 33 GLDK-LTSLSCHHNQIDVL--EDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLD 89
G+ K +T L N + + E +FR L TL +DL++N I ++ + +++S+L+TL
Sbjct: 749 GMPKDVTELYLEGNHLTAVPKELSTFRQL-TL--IDLSNNSISMLTNHTFSNMSHLSTLI 805
Query: 90 LSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTLTL 138
LS+N LR + L+SL+ L L NDIS V D +++ L L
Sbjct: 806 LSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLAL 854
Score = 113 (44.8 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 27/80 (33%), Positives = 40/80 (50%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
L ++ NQ + R A G+ + +L +N I +ED +FRAL L L L +N I +
Sbjct: 138 LDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRIL 197
Query: 76 GASLAHLSNLTTLDLSHNFL 95
S H+ + TL L N L
Sbjct: 198 VTSFNHMPKIRTLRLHSNHL 217
Score = 112 (44.5 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 29/110 (26%), Positives = 52/110 (47%)
Query: 29 GALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTL 88
G L L ++ +N+I + + +F + + L L N++ + G LS L TL
Sbjct: 551 GIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRGLSGLKTL 610
Query: 89 DLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTLTL 138
L N + + D L S++ L L DN I+ ++P V+++T+ L
Sbjct: 611 MLRSNLISCVNNDTFAGLSSVRLLSLYDNRITTISPGAFTTLVSLSTINL 660
Score = 105 (42.0 bits), Expect = 0.00023, P = 0.00023
Identities = 32/124 (25%), Positives = 55/124 (44%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
+ + N S+ GA KL + NQI + +F+ L +L+ L L N+I +
Sbjct: 312 IRLEQNSIKSIPAGAFIQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIP 371
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITT 135
L +L L L+ N + L + L++L L L DN + ++ + +I T
Sbjct: 372 KGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQT 431
Query: 136 LTLS 139
L L+
Sbjct: 432 LHLA 435
Score = 99 (39.9 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 26/84 (30%), Positives = 44/84 (52%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L SL L + N+ + + +G GL L L + N+I+ L ++F+ L L+ L L N
Sbjct: 354 LKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDN 413
Query: 70 RIVAVSGASLAHLSNLTTLDLSHN 93
++ +S A L ++ TL L+ N
Sbjct: 414 KLQTISKGLFAPLQSIQTLHLAQN 437
Score = 52 (23.4 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 12/40 (30%), Positives = 24/40 (60%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 45
T LSS+++LS+ N+ +++ GA L L++++ N
Sbjct: 624 TFAGLSSVRLLSLYDNRITTISPGAFTTLVSLSTINLLSN 663
Score = 43 (20.2 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 86 TTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
T +D S+ L + L P + +LRL+DNDI+++
Sbjct: 514 TIVDCSNQKLSRIPSHL--P-EYTTDLRLNDNDIAVL 547
>UNIPROTKB|O88280 [details] [associations]
symbol:Slit3 "Slit homolog 3 protein" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
RGD:69311 GO:GO:0008285 GO:GO:0005615 GO:GO:0007420 GO:GO:0016020
GO:GO:0030308 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
Pfam:PF01463 GO:GO:0051414 GO:GO:0050919 GO:GO:0035385
GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T CTD:6586 KO:K06850 EMBL:AB011531 IPI:IPI00207574
PIR:T13953 RefSeq:NP_112611.1 UniGene:Rn.12298
ProteinModelPortal:O88280 SMR:O88280 IntAct:O88280 STRING:O88280
PRIDE:O88280 GeneID:83467 KEGG:rno:83467 UCSC:RGD:69311
InParanoid:O88280 NextBio:615863 ArrayExpress:O88280
Genevestigator:O88280 GermOnline:ENSRNOG00000007377 Uniprot:O88280
Length = 1523
Score = 150 (57.9 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 37/129 (28%), Positives = 65/129 (50%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L +L+VL + NQ S + RGA L +L L + N++ VL + F++ L+ LDL+ N
Sbjct: 84 LKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSEN 143
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+I + + ++ + L L +N + + L+ L+ L L++N+IS +
Sbjct: 144 QIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNH 203
Query: 130 NVTITTLTL 138
I TL L
Sbjct: 204 MPKIRTLRL 212
Score = 134 (52.2 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 37/105 (35%), Positives = 53/105 (50%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
LK + I+ NQ S + A GL LTSL + N+I + F L +L L L N+I
Sbjct: 333 LKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKIN 392
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
+ + L NL L L N L+ +++ L PL+S+Q L L N
Sbjct: 393 CLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQN 437
Score = 129 (50.5 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 33/110 (30%), Positives = 55/110 (50%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
++L +L+ +++++N+ VR GA G + L NQ++ + FR LS L L L
Sbjct: 554 KKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRGLSGLKTLMLR 613
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
N I V+ + A LS++ L L N + ++ T L SL + L N
Sbjct: 614 SNLISCVNNDTFAGLSSVRLLSLYDNRITTISPGAFTTLVSLSTINLLSN 663
Score = 118 (46.6 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 29/107 (27%), Positives = 50/107 (46%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
L + N + + + GL L L NQ+ V+E +F+ L L L L N++ +
Sbjct: 66 LDLDRNNITRITKMDFTGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLP 125
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
LT LDLS N ++ + + + ++ L+LD+N IS +
Sbjct: 126 ELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCI 172
Score = 116 (45.9 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 37/109 (33%), Positives = 60/109 (55%)
Query: 33 GLDK-LTSLSCHHNQIDVL--EDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLD 89
G+ K +T L N + + E +FR L TL +DL++N I ++ + +++S+L+TL
Sbjct: 749 GMPKDVTELYLEGNHLTAVPKELSTFRQL-TL--IDLSNNSISMLTNHTFSNMSHLSTLI 805
Query: 90 LSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTLTL 138
LS+N LR + L+SL+ L L NDIS V D +++ L L
Sbjct: 806 LSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLAL 854
Score = 113 (44.8 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 27/80 (33%), Positives = 40/80 (50%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
L ++ NQ + R A G+ + +L +N I +ED +FRAL L L L +N I +
Sbjct: 138 LDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRIL 197
Query: 76 GASLAHLSNLTTLDLSHNFL 95
S H+ + TL L N L
Sbjct: 198 VTSFNHMPKIRTLRLHSNHL 217
Score = 112 (44.5 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 29/110 (26%), Positives = 52/110 (47%)
Query: 29 GALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTL 88
G L L ++ +N+I + + +F + + L L N++ + G LS L TL
Sbjct: 551 GIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRGLSGLKTL 610
Query: 89 DLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTLTL 138
L N + + D L S++ L L DN I+ ++P V+++T+ L
Sbjct: 611 MLRSNLISCVNNDTFAGLSSVRLLSLYDNRITTISPGAFTTLVSLSTINL 660
Score = 105 (42.0 bits), Expect = 0.00023, P = 0.00023
Identities = 32/124 (25%), Positives = 55/124 (44%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
+ + N S+ GA KL + NQI + +F+ L +L+ L L N+I +
Sbjct: 312 IRLEQNSIKSIPAGAFIQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIP 371
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITT 135
L +L L L+ N + L + L++L L L DN + ++ + +I T
Sbjct: 372 KGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQT 431
Query: 136 LTLS 139
L L+
Sbjct: 432 LHLA 435
Score = 99 (39.9 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 26/84 (30%), Positives = 44/84 (52%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L SL L + N+ + + +G GL L L + N+I+ L ++F+ L L+ L L N
Sbjct: 354 LKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDN 413
Query: 70 RIVAVSGASLAHLSNLTTLDLSHN 93
++ +S A L ++ TL L+ N
Sbjct: 414 KLQTISKGLFAPLQSIQTLHLAQN 437
Score = 52 (23.4 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 12/40 (30%), Positives = 24/40 (60%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 45
T LSS+++LS+ N+ +++ GA L L++++ N
Sbjct: 624 TFAGLSSVRLLSLYDNRITTISPGAFTTLVSLSTINLLSN 663
Score = 43 (20.2 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 86 TTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
T +D S+ L + L P + +LRL+DNDI+++
Sbjct: 514 TIVDCSNQKLSRIPSHL--P-EYTTDLRLNDNDIAVL 547
>MGI|MGI:1315202 [details] [associations]
symbol:Slit3 "slit homolog 3 (Drosophila)" species:10090
"Mus musculus" [GO:0005102 "receptor binding" evidence=TAS]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO;IDA] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0007411
"axon guidance" evidence=ISO;IDA] [GO:0008285 "negative regulation
of cell proliferation" evidence=IGI] [GO:0009887 "organ
morphogenesis" evidence=IGI;IMP] [GO:0010629 "negative regulation
of gene expression" evidence=IGI] [GO:0016020 "membrane"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0035385 "Roundabout signaling pathway" evidence=ISO]
[GO:0048495 "Roundabout binding" evidence=ISO] [GO:0048846 "axon
extension involved in axon guidance" evidence=ISO] [GO:0050919
"negative chemotaxis" evidence=ISO] [GO:0070100 "negative
regulation of chemokine-mediated signaling pathway" evidence=ISO]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
MGI:MGI:1315202 GO:GO:0005739 GO:GO:0007411 GO:GO:0008285
GO:GO:0005615 GO:GO:0007420 GO:GO:0030308 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005102 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186 GO:GO:0032870
GO:GO:0010629 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661 Pfam:PF01463
GO:GO:0051414 GeneTree:ENSGT00700000104083 GO:GO:0050919
GO:GO:0035385 GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T CTD:6586 KO:K06850 ChiTaRS:SLIT3 EMBL:AF144629
EMBL:AL669839 EMBL:AL669856 EMBL:AL731688 EMBL:AL732401
EMBL:AL732630 IPI:IPI00664551 RefSeq:NP_035542.2 UniGene:Mm.478604
ProteinModelPortal:Q9WVB4 SMR:Q9WVB4 STRING:Q9WVB4
PhosphoSite:Q9WVB4 PRIDE:Q9WVB4 Ensembl:ENSMUST00000069837
GeneID:20564 KEGG:mmu:20564 InParanoid:B1ATW4 OMA:SVDCHGL
NextBio:298861 Bgee:Q9WVB4 CleanEx:MM_SLIT3 Genevestigator:Q9WVB4
GermOnline:ENSMUSG00000056427 Uniprot:Q9WVB4
Length = 1523
Score = 150 (57.9 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 37/129 (28%), Positives = 65/129 (50%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L +L+VL + NQ S + RGA L +L L + N++ VL + F++ L+ LDL+ N
Sbjct: 84 LKNLRVLHLEDNQVSIIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSEN 143
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+I + + ++ + L L +N + + L+ L+ L L++N+IS +
Sbjct: 144 QIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNH 203
Query: 130 NVTITTLTL 138
I TL L
Sbjct: 204 MPKIRTLRL 212
Score = 139 (54.0 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 35/110 (31%), Positives = 56/110 (50%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
++L +L+ +++++N+ VR GA G + L NQ++ + FR LS+L L L
Sbjct: 554 KKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRGLSSLKTLMLR 613
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
N I VS + A LS++ L L N + +T T L SL + L N
Sbjct: 614 SNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSN 663
Score = 134 (52.2 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 37/105 (35%), Positives = 53/105 (50%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
LK + I+ NQ S + A GL LTSL + N+I + F L +L L L N+I
Sbjct: 333 LKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKIN 392
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
+ + L NL L L N L+ +++ L PL+S+Q L L N
Sbjct: 393 CLRVNTFQDLQNLNLLSLYDNKLQTISKGLFVPLQSIQTLHLAQN 437
Score = 121 (47.7 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 29/107 (27%), Positives = 51/107 (47%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
L + N + + + AGL L L NQ+ ++E +F+ L L L L N++ +
Sbjct: 66 LDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSIIERGAFQDLKQLERLRLNKNKLQVLP 125
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
LT LDLS N ++ + + + ++ L+LD+N IS +
Sbjct: 126 ELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCI 172
Score = 119 (46.9 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 33/124 (26%), Positives = 59/124 (47%)
Query: 16 LSIAHNQFSSVRR-GALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAV 74
L + N S + G L L ++ +N+I + + +F + + L L N++ +
Sbjct: 537 LRLNDNDISVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETM 596
Query: 75 SGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTIT 134
G LS+L TL L N + ++ D L S++ L L DN I+ +TP V+++
Sbjct: 597 HGRMFRGLSSLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLS 656
Query: 135 TLTL 138
T+ L
Sbjct: 657 TINL 660
Score = 116 (45.9 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 37/109 (33%), Positives = 60/109 (55%)
Query: 33 GLDK-LTSLSCHHNQIDVL--EDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLD 89
G+ K +T L N + + E +FR L TL +DL++N I ++ + +++S+L+TL
Sbjct: 749 GMPKDVTELYLEGNHLTAVPKELSAFRQL-TL--IDLSNNSISMLTNHTFSNMSHLSTLI 805
Query: 90 LSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTLTL 138
LS+N LR + L+SL+ L L NDIS V D +++ L L
Sbjct: 806 LSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLAL 854
Score = 113 (44.8 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 27/80 (33%), Positives = 40/80 (50%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
L ++ NQ + R A G+ + +L +N I +ED +FRAL L L L +N I +
Sbjct: 138 LDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRIL 197
Query: 76 GASLAHLSNLTTLDLSHNFL 95
S H+ + TL L N L
Sbjct: 198 VTSFNHMPKIRTLRLHSNHL 217
Score = 103 (41.3 bits), Expect = 0.00037, P = 0.00037
Identities = 32/124 (25%), Positives = 55/124 (44%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
+ + N S+ GA KL + NQI + +F+ L +L+ L L N+I +
Sbjct: 312 IRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIP 371
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITT 135
L +L L L+ N + L + L++L L L DN + ++ + +I T
Sbjct: 372 KGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFVPLQSIQT 431
Query: 136 LTLS 139
L L+
Sbjct: 432 LHLA 435
Score = 52 (23.4 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 12/40 (30%), Positives = 24/40 (60%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 45
T LSS+++LS+ N+ +++ GA L L++++ N
Sbjct: 624 TFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSN 663
>TAIR|locus:2098267 [details] [associations]
symbol:IMK2 "inflorescence meristem receptor-like kinase
2" species:3702 "Arabidopsis thaliana" [GO:0004672 "protein kinase
activity" evidence=IEA;NAS] [GO:0004674 "protein serine/threonine
kinase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005886 "plasma membrane" evidence=ISM;IDA]
[GO:0006468 "protein phosphorylation" evidence=IEA;ISS] [GO:0007169
"transmembrane receptor protein tyrosine kinase signaling pathway"
evidence=ISS] [GO:0016020 "membrane" evidence=NAS] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0009505 "plant-type cell
wall" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
[GO:0008283 "cell proliferation" evidence=RCA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000719 InterPro:IPR011009
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
GO:GO:0016021 GO:GO:0005886 GO:GO:0009506 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR eggNOG:COG0515
SUPFAM:SSF56112 GO:GO:0004672 GO:GO:0009505 InterPro:IPR013210
Pfam:PF08263 HSSP:P58822 HOGENOM:HOG000116554 EMBL:AL132968
EMBL:AF372978 EMBL:AY054515 EMBL:BT006350 EMBL:FJ708739
IPI:IPI00530691 PIR:T46070 RefSeq:NP_190742.1 UniGene:At.669
ProteinModelPortal:Q9SCT4 SMR:Q9SCT4 STRING:Q9SCT4 PaxDb:Q9SCT4
PRIDE:Q9SCT4 EnsemblPlants:AT3G51740.1 GeneID:824337
KEGG:ath:AT3G51740 GeneFarm:540 TAIR:At3g51740 InParanoid:Q9SCT4
OMA:HARAPDS PhylomeDB:Q9SCT4 ProtClustDB:CLSN2915461 Uniprot:Q9SCT4
Length = 836
Score = 147 (56.8 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 43/127 (33%), Positives = 61/127 (48%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
LK L++ HN+FS +L L +S HNQ+ L L LD ++N I
Sbjct: 241 LKTLNLDHNRFSGAVPVSLCKHSLLEEVSISHNQLSGSIPRECGGLPHLQSLDFSYNSIN 300
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVT 132
S ++LS+L +L+L N L+ D I L +L EL L N I+ P+ IG+
Sbjct: 301 GTIPDSFSNLSSLVSLNLESNHLKGPIPDAIDRLHNLTELNLKRNKINGPIPETIGNISG 360
Query: 133 ITTLTLS 139
I L LS
Sbjct: 361 IKKLDLS 367
Score = 121 (47.7 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 37/115 (32%), Positives = 58/115 (50%)
Query: 11 SSLKVLSIAHNQFS-SVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
S L+ +SI+HNQ S S+ R GL L SL +N I+ SF LS+L L+L N
Sbjct: 263 SLLEEVSISHNQLSGSIPREC-GGLPHLQSLDFSYNSINGTIPDSFSNLSSLVSLNLESN 321
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTP 124
+ ++ L NLT L+L N + + I + +++L L +N+ + P
Sbjct: 322 HLKGPIPDAIDRLHNLTELNLKRNKINGPIPETIGNISGIKKLDLSENNFTGPIP 376
Score = 119 (46.9 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 37/134 (27%), Positives = 58/134 (43%)
Query: 6 TVRRLSSLKVLSIAHNQFS-SVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHL 64
+V R +L L + HN S S+ + G L +L+ HN+ S S L +
Sbjct: 209 SVARSYTLTFLDLQHNNLSGSIPDFFVNGSHPLKTLNLDHNRFSGAVPVSLCKHSLLEEV 268
Query: 65 DLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTP 124
++HN++ L +L +LD S+N + D + L SL L L+ N + P
Sbjct: 269 SISHNQLSGSIPRECGGLPHLQSLDFSYNSINGTIPDSFSNLSSLVSLNLESNHLKGPIP 328
Query: 125 DVIGDNVTITTLTL 138
D I +T L L
Sbjct: 329 DAIDRLHNLTELNL 342
>RGD|69307 [details] [associations]
symbol:Slit1 "slit homolog 1 (Drosophila)" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005615
"extracellular space" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0007409 "axonogenesis" evidence=ISO]
[GO:0007411 "axon guidance" evidence=ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0008045 "motor neuron axon guidance"
evidence=IEA;ISO] [GO:0021510 "spinal cord development"
evidence=IEP] [GO:0021772 "olfactory bulb development" evidence=ISO]
[GO:0022028 "tangential migration from the subventricular zone to
the olfactory bulb" evidence=IEA;ISO] [GO:0022029 "telencephalon
cell migration" evidence=ISO] [GO:0031290 "retinal ganglion cell
axon guidance" evidence=IEA;ISO] [GO:0033563 "dorsal/ventral axon
guidance" evidence=IEA;ISO] [GO:0040023 "establishment of nucleus
localization" evidence=IEA;ISO] [GO:0043395 "heparan sulfate
proteoglycan binding" evidence=IDA] [GO:0048495 "Roundabout binding"
evidence=IEA;ISO] [GO:0048812 "neuron projection morphogenesis"
evidence=ISO] [GO:0048843 "negative regulation of axon extension
involved in axon guidance" evidence=IDA] [GO:0048846 "axon extension
involved in axon guidance" evidence=IEA;ISO] [GO:0050919 "negative
chemotaxis" evidence=IEA;ISO] [GO:0051964 "negative regulation of
synapse assembly" evidence=ISS] [GO:0021834 "chemorepulsion involved
in embryonic olfactory bulb interneuron precursor migration"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:69307 GO:GO:0005737 GO:GO:0005615
GO:GO:0007420 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186
GO:GO:0043395 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 GO:GO:0051964
Pfam:PF01463 GO:GO:0022028 GO:GO:0050919 GO:GO:0048843 CTD:6585
HOGENOM:HOG000116120 HOVERGEN:HBG057959 KO:K06838 OrthoDB:EOG4VDPXM
EMBL:AB011530 EMBL:AF133730 EMBL:AB073213 EMBL:AB073214
EMBL:AB073215 EMBL:AB017170 IPI:IPI00389760 IPI:IPI00409983
IPI:IPI00409984 IPI:IPI00409985 PIR:T42218 RefSeq:NP_075242.1
UniGene:Rn.30002 ProteinModelPortal:O88279 SMR:O88279 STRING:O88279
PRIDE:O88279 GeneID:65047 KEGG:rno:65047 UCSC:RGD:69307
InParanoid:O88279 NextBio:613884 ArrayExpress:O88279
Genevestigator:O88279 GermOnline:ENSRNOG00000026065 Uniprot:O88279
Length = 1531
Score = 150 (57.9 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 35/113 (30%), Positives = 59/113 (52%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L+VL + NQ +V RGA + +L L + NQ+ VL + F+ LS LDL+ N
Sbjct: 84 LKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRLDLSEN 143
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
+ AV + ++L L L N + + + L+ L+ L L++N+I+ +
Sbjct: 144 SLQAVPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTI 196
Score = 131 (51.2 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 33/124 (26%), Positives = 62/124 (50%)
Query: 16 LSIAHNQFSSVRR-GALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAV 74
L + +N+ S + G L L ++ +N++ +ED +F +++S L L N++ +V
Sbjct: 545 LRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLESV 604
Query: 75 SGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTIT 134
L L TL L +N + + D T L++++ L L DN I+ ++P ++
Sbjct: 605 RSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALS 664
Query: 135 TLTL 138
TL L
Sbjct: 665 TLNL 668
Score = 124 (48.7 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 30/107 (28%), Positives = 52/107 (48%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
++LS LK +++++N+ S + G G ++ L NQ++ + FR L L L L
Sbjct: 562 KKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLESVRSGMFRGLDGLRTLMLR 621
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRL 114
+NRI + S L N+ L L N + ++ L++L L L
Sbjct: 622 NNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNL 668
Score = 121 (47.7 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 35/110 (31%), Positives = 60/110 (54%)
Query: 33 GLDK-LTSLSCHHNQIDVLEDHSFRALSTLSHL---DLAHNRIVAVSGASLAHLSNLTTL 88
G+ K +T L NQ ++ LST +L DL++N+I ++S +S ++S LTTL
Sbjct: 758 GIPKNVTELYLDGNQFTLVPGQ----LSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTL 813
Query: 89 DLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTLTL 138
LS+N L+ + L+SL+ L L ND+S + + D +++ L +
Sbjct: 814 ILSYNALQCIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAI 863
Score = 120 (47.3 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 33/105 (31%), Positives = 53/105 (50%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
L+ + +++NQ + + A GL L SL + N+I L F L TL L L N+I
Sbjct: 335 LRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKIN 394
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
+ + L NL+ L L N +++L + T L+++Q L L N
Sbjct: 395 CIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQN 439
Score = 117 (46.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 30/88 (34%), Positives = 43/88 (48%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T +S+ L + NQ SVR G GLD L +L +N+I + + SF L + L
Sbjct: 584 TFEGATSVSELHLTANQLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLS 643
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHN 93
L N I +S + L L+TL+L N
Sbjct: 644 LYDNHITTISPGAFDTLQALSTLNLLAN 671
Score = 116 (45.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 31/107 (28%), Positives = 50/107 (46%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
L + N + + + AGL +L L NQI +E +F + L L L N++ +
Sbjct: 66 LELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLP 125
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
+ L+ LDLS N L+A+ + L+ L+LD N IS +
Sbjct: 126 ELLFQNNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCI 172
Score = 115 (45.5 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 29/84 (34%), Positives = 41/84 (48%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
+L L ++ N +V R A G L +L NQI +E+ +FRAL L L L +N I
Sbjct: 134 ALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNI 193
Query: 72 VAVSGASLAHLSNLTTLDLSHNFL 95
+ +S H+ L T L N L
Sbjct: 194 TTIPVSSFNHMPKLRTFRLHSNHL 217
Score = 41 (19.5 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 8/16 (50%), Positives = 14/16 (87%)
Query: 107 KSLQELRLDDNDISMV 122
+S ELRL++N+IS++
Sbjct: 540 QSTTELRLNNNEISIL 555
>UNIPROTKB|O88279 [details] [associations]
symbol:Slit1 "Slit homolog 1 protein" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:69307 GO:GO:0005737 GO:GO:0005615
GO:GO:0007420 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186
GO:GO:0043395 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 GO:GO:0051964
Pfam:PF01463 GO:GO:0022028 GO:GO:0050919 GO:GO:0048843 CTD:6585
HOGENOM:HOG000116120 HOVERGEN:HBG057959 KO:K06838 OrthoDB:EOG4VDPXM
EMBL:AB011530 EMBL:AF133730 EMBL:AB073213 EMBL:AB073214
EMBL:AB073215 EMBL:AB017170 IPI:IPI00389760 IPI:IPI00409983
IPI:IPI00409984 IPI:IPI00409985 PIR:T42218 RefSeq:NP_075242.1
UniGene:Rn.30002 ProteinModelPortal:O88279 SMR:O88279 STRING:O88279
PRIDE:O88279 GeneID:65047 KEGG:rno:65047 UCSC:RGD:69307
InParanoid:O88279 NextBio:613884 ArrayExpress:O88279
Genevestigator:O88279 GermOnline:ENSRNOG00000026065 Uniprot:O88279
Length = 1531
Score = 150 (57.9 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 35/113 (30%), Positives = 59/113 (52%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L+VL + NQ +V RGA + +L L + NQ+ VL + F+ LS LDL+ N
Sbjct: 84 LKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRLDLSEN 143
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
+ AV + ++L L L N + + + L+ L+ L L++N+I+ +
Sbjct: 144 SLQAVPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTI 196
Score = 131 (51.2 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 33/124 (26%), Positives = 62/124 (50%)
Query: 16 LSIAHNQFSSVRR-GALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAV 74
L + +N+ S + G L L ++ +N++ +ED +F +++S L L N++ +V
Sbjct: 545 LRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLESV 604
Query: 75 SGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTIT 134
L L TL L +N + + D T L++++ L L DN I+ ++P ++
Sbjct: 605 RSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALS 664
Query: 135 TLTL 138
TL L
Sbjct: 665 TLNL 668
Score = 124 (48.7 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 30/107 (28%), Positives = 52/107 (48%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
++LS LK +++++N+ S + G G ++ L NQ++ + FR L L L L
Sbjct: 562 KKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLESVRSGMFRGLDGLRTLMLR 621
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRL 114
+NRI + S L N+ L L N + ++ L++L L L
Sbjct: 622 NNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNL 668
Score = 121 (47.7 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 35/110 (31%), Positives = 60/110 (54%)
Query: 33 GLDK-LTSLSCHHNQIDVLEDHSFRALSTLSHL---DLAHNRIVAVSGASLAHLSNLTTL 88
G+ K +T L NQ ++ LST +L DL++N+I ++S +S ++S LTTL
Sbjct: 758 GIPKNVTELYLDGNQFTLVPGQ----LSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTL 813
Query: 89 DLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTLTL 138
LS+N L+ + L+SL+ L L ND+S + + D +++ L +
Sbjct: 814 ILSYNALQCIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAI 863
Score = 120 (47.3 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 33/105 (31%), Positives = 53/105 (50%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
L+ + +++NQ + + A GL L SL + N+I L F L TL L L N+I
Sbjct: 335 LRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKIN 394
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
+ + L NL+ L L N +++L + T L+++Q L L N
Sbjct: 395 CIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQN 439
Score = 117 (46.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 30/88 (34%), Positives = 43/88 (48%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T +S+ L + NQ SVR G GLD L +L +N+I + + SF L + L
Sbjct: 584 TFEGATSVSELHLTANQLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLS 643
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHN 93
L N I +S + L L+TL+L N
Sbjct: 644 LYDNHITTISPGAFDTLQALSTLNLLAN 671
Score = 116 (45.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 31/107 (28%), Positives = 50/107 (46%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
L + N + + + AGL +L L NQI +E +F + L L L N++ +
Sbjct: 66 LELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLP 125
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
+ L+ LDLS N L+A+ + L+ L+LD N IS +
Sbjct: 126 ELLFQNNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCI 172
Score = 115 (45.5 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 29/84 (34%), Positives = 41/84 (48%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
+L L ++ N +V R A G L +L NQI +E+ +FRAL L L L +N I
Sbjct: 134 ALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNI 193
Query: 72 VAVSGASLAHLSNLTTLDLSHNFL 95
+ +S H+ L T L N L
Sbjct: 194 TTIPVSSFNHMPKLRTFRLHSNHL 217
Score = 41 (19.5 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 8/16 (50%), Positives = 14/16 (87%)
Query: 107 KSLQELRLDDNDISMV 122
+S ELRL++N+IS++
Sbjct: 540 QSTTELRLNNNEISIL 555
>WB|WBGene00021828 [details] [associations]
symbol:Y54E10A.6 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004826
"phenylalanine-tRNA ligase activity" evidence=IEA]
InterPro:IPR001611 InterPro:IPR005146 PROSITE:PS51450 SMART:SM00873
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0003723
EMBL:FO081614 GO:GO:0004826 HOGENOM:HOG000007166 OMA:ADNCLRE
GeneTree:ENSGT00530000063489 RefSeq:NP_491115.1
ProteinModelPortal:Q9N3F2 SMR:Q9N3F2 DIP:DIP-25158N
MINT:MINT-1076680 STRING:Q9N3F2 PaxDb:Q9N3F2
EnsemblMetazoa:Y54E10A.6 GeneID:171890 KEGG:cel:CELE_Y54E10A.6
UCSC:Y54E10A.6 CTD:171890 WormBase:Y54E10A.6 InParanoid:Q9N3F2
NextBio:873127 Uniprot:Q9N3F2
Length = 507
Score = 144 (55.7 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 44/135 (32%), Positives = 74/135 (54%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHL---DL 66
L LK + ++HN ++ +++ + L SL ++N+ L + SF +S LS+L D
Sbjct: 90 LPKLKFMDLSHNHLDALP-ASISKCENLESLILNNNR---LNESSFPDISNLSNLHIFDA 145
Query: 67 AHNRIVAVSGASLAH-LS-NLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTP 124
AHN I + + +H LS L T+ LSHN + + D ++ LK L+EL++D+N + V P
Sbjct: 146 AHNTISKIPASLTSHNLSAKLHTIILSHNSIEVIP-DSLSNLKQLKELKIDENKLKDV-P 203
Query: 125 DVIGDNVTITTLTLS 139
VI + L +S
Sbjct: 204 SVIAHLPKLKVLDIS 218
Score = 102 (41.0 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 29/89 (32%), Positives = 43/89 (48%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALA-GLD-KLTSLSCHHNQIDVLEDHSFRALSTLSHL 64
+ LS+L + AHN S + + L KL ++ HN I+V+ D S L L L
Sbjct: 134 ISNLSNLHIFDAAHNTISKIPASLTSHNLSAKLHTIILSHNSIEVIPD-SLSNLKQLKEL 192
Query: 65 DLAHNRIVAVSGASLAHLSNLTTLDLSHN 93
+ N++ V +AHL L LD+S N
Sbjct: 193 KIDENKLKDVPSV-IAHLPKLKVLDISKN 220
Score = 36 (17.7 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 98 LTQDLITPLKSLQELRLDDND-ISMVTPD 125
L+ I P S+ ++R+ D+D + + PD
Sbjct: 467 LSSRQIFPTLSIDQVRVVDSDTLVSIYPD 495
>ZFIN|ZDB-GENE-030131-6062 [details] [associations]
symbol:lrrc40 "leucine rich repeat containing 40"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-030131-6062 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR025875 Pfam:PF12799 EMBL:AY394934
EMBL:BC055223 IPI:IPI00499633 RefSeq:NP_956156.2 UniGene:Dr.80656
ProteinModelPortal:Q7SXW3 GeneID:334130 KEGG:dre:334130 CTD:55631
HOGENOM:HOG000005761 HOVERGEN:HBG081930 InParanoid:Q7SXW3
OrthoDB:EOG4M65HK NextBio:20810275 ArrayExpress:Q7SXW3
InterPro:IPR015766 PANTHER:PTHR23155:SF28 Uniprot:Q7SXW3
Length = 601
Score = 145 (56.1 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 40/134 (29%), Positives = 72/134 (53%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
+ ++ +L++L + NQ S+ LA ++ L L HN++ L + TL L
Sbjct: 214 ISQMKNLRMLDCSRNQMESIPP-VLAQMESLEQLYLRHNKLRYLPE--LPCCKTLKELHC 270
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDV 126
+N+I + L HL+ L+ L+L N +++L ++ IT L+ L+ L L +NDIS + P
Sbjct: 271 GNNQIEVLEAEHLKHLNALSLLELRDNKVKSLPEE-ITLLQGLERLDLTNNDISSL-PCG 328
Query: 127 IGDNVTITTLTLSG 140
+G + +L+L G
Sbjct: 329 LGTLPKLKSLSLEG 342
Score = 134 (52.2 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 38/117 (32%), Positives = 65/117 (55%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLED--HSFRALSTLSHLDLA 67
L L+ L ++HN+ + + +G+ +LT+L C H Q +++E L L LDL+
Sbjct: 125 LEQLQKLILSHNKLTELP----SGVWRLTNLRCLHLQQNLIEQIPRDLGQLVNLDELDLS 180
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTP 124
+N ++ + SLA+L NL LDLS N L++L I+ +K+L+ L N + + P
Sbjct: 181 NNHLIDIP-ESLANLQNLVKLDLSCNKLKSLPP-AISQMKNLRMLDCSRNQMESIPP 235
Score = 121 (47.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 38/126 (30%), Positives = 65/126 (51%)
Query: 2 SIWCTVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTL 61
SI + ++ SL+ L + HN+ + L L L C +NQI+VLE + L+ L
Sbjct: 232 SIPPVLAQMESLEQLYLRHNKLRYLPE--LPCCKTLKELHCGNNQIEVLEAEHLKHLNAL 289
Query: 62 SHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISM 121
S L+L N++ ++ + L L LDL++N + +L L T L L+ L L+ N +
Sbjct: 290 SLLELRDNKVKSLP-EEITLLQGLERLDLTNNDISSLPCGLGT-LPKLKSLSLEGNPLRA 347
Query: 122 VTPDVI 127
+ D++
Sbjct: 348 IRRDLL 353
Score = 117 (46.2 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 40/120 (33%), Positives = 61/120 (50%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
V+ L +L VL I NQ SS+ ++ L++L L HN++ L +R L+ L L L
Sbjct: 99 VKLLPALVVLDIHDNQLSSLP-DSIGDLEQLQKLILSHNKLTELPSGVWR-LTNLRCLHL 156
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDV 126
N I + L L NL LDLS+N L + + L L++L +L L N + + P +
Sbjct: 157 QQNLIEQIP-RDLGQLVNLDELDLSNNHLIDIPESLAN-LQNLVKLDLSCNKLKSLPPAI 214
>MGI|MGI:106038 [details] [associations]
symbol:Lrrn1 "leucine rich repeat protein 1, neuronal"
species:10090 "Mus musculus" [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060
MGI:MGI:106038 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
MEROPS:I43.001 CTD:57633 GeneTree:ENSGT00690000102097
HOGENOM:HOG000252914 HOVERGEN:HBG052361 OMA:GINNMGE
OrthoDB:EOG4XKV6G EMBL:D45913 EMBL:AK173186 EMBL:AK139355
EMBL:AK139965 EMBL:AK160841 EMBL:BC031122 EMBL:BC058701
IPI:IPI00126070 RefSeq:NP_032542.1 UniGene:Mm.428543
UniGene:Mm.488119 ProteinModelPortal:Q61809 SMR:Q61809
STRING:Q61809 PaxDb:Q61809 PRIDE:Q61809 Ensembl:ENSMUST00000049285
GeneID:16979 KEGG:mmu:16979 UCSC:uc009ddd.1 InParanoid:Q61809
ChiTaRS:LRRN1 NextBio:291056 Bgee:Q61809 CleanEx:MM_LRRN1
Genevestigator:Q61809 GermOnline:ENSMUSG00000034648 Uniprot:Q61809
Length = 716
Score = 146 (56.5 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 33/113 (29%), Positives = 60/113 (53%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
+++L +L L + N F++++ LA L +LT+L NQI + D+ + LS L L +
Sbjct: 91 LQQLFNLTELDFSQNNFTNIKEVGLANLTQLTTLHLEENQISEMTDYCLQDLSNLQELYI 150
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
HN+I +S + + L NL L L+ N L+ + +L+ L + +N +
Sbjct: 151 NHNQISTISANAFSGLKNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGENPV 203
Score = 140 (54.3 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 36/122 (29%), Positives = 64/122 (52%)
Query: 1 MSIWCTVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALST 60
M+ +C ++ LS+L+ L I HNQ S++ A +GL L L + N++ V++ F +
Sbjct: 134 MTDYC-LQDLSNLQELYINHNQISTISANAFSGLKNLLRLHLNSNKLKVIDSRWFDSTPN 192
Query: 61 LSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
L L + N ++ + + LSNL +L L+ +L + + + L SL+ L DN +
Sbjct: 193 LEILMIGENPVIGILDMNFRPLSNLRSLVLAGMYLTDVPGNALVGLDSLESLSFYDNKLI 252
Query: 121 MV 122
V
Sbjct: 253 KV 254
Score = 105 (42.0 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 25/82 (30%), Positives = 41/82 (50%)
Query: 58 LSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
L L+ LD + N + LA+L+ LTTL L N + +T + L +LQEL ++ N
Sbjct: 94 LFNLTELDFSQNNFTNIKEVGLANLTQLTTLHLEENQISEMTDYCLQDLSNLQELYINHN 153
Query: 118 DISMVTPDVIGDNVTITTLTLS 139
IS ++ + + L L+
Sbjct: 154 QISTISANAFSGLKNLLRLHLN 175
Score = 102 (41.0 bits), Expect = 0.00040, P = 0.00040
Identities = 29/105 (27%), Positives = 44/105 (41%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L+ L L + NQ S + L L L L +HNQI + ++F L L L L N
Sbjct: 118 LTQLTTLHLEENQISEMTDYCLQDLSNLQELYINHNQISTISANAFSGLKNLLRLHLNSN 177
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRL 114
++ + NL L + N + + PL +L+ L L
Sbjct: 178 KLKVIDSRWFDSTPNLEILMIGENPVIGILDMNFRPLSNLRSLVL 222
>UNIPROTKB|A0N0X6 [details] [associations]
symbol:LRRN1 "Leucine-rich repeat neuronal protein 1"
species:9913 "Bos taurus" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
EMBL:EF093509 IPI:IPI00699748 RefSeq:NP_001074207.1
UniGene:Bt.17579 ProteinModelPortal:A0N0X6 PRIDE:A0N0X6
Ensembl:ENSBTAT00000001560 GeneID:539619 KEGG:bta:539619 CTD:57633
GeneTree:ENSGT00690000102097 HOGENOM:HOG000252914
HOVERGEN:HBG052361 InParanoid:A0N0X6 OMA:GINNMGE OrthoDB:EOG4XKV6G
BioCyc:CATTLE:539619-MONOMER NextBio:20878110 Uniprot:A0N0X6
Length = 716
Score = 146 (56.5 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 33/113 (29%), Positives = 60/113 (53%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
+++L +L L + N F++++ LA L +LT+L NQI + D+ + LS L L +
Sbjct: 91 LQQLFNLTELDFSQNNFTNIKEVGLANLTQLTTLHLEENQITEMNDYCLQDLSNLQELYI 150
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
HN+I +S + + L NL L L+ N L+ + +L+ L + +N +
Sbjct: 151 NHNQISTISANAFSGLKNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGENPV 203
Score = 141 (54.7 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 36/122 (29%), Positives = 64/122 (52%)
Query: 1 MSIWCTVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALST 60
M+ +C ++ LS+L+ L I HNQ S++ A +GL L L + N++ V++ F +
Sbjct: 134 MNDYC-LQDLSNLQELYINHNQISTISANAFSGLKNLLRLHLNSNKLKVIDSRWFDSTPN 192
Query: 61 LSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
L L + N ++ + + LSNL +L L+ +L + + + L SL+ L DN +
Sbjct: 193 LEILMIGENPVIGILDMNFKPLSNLRSLVLAGMYLTDIPGNALVGLDSLESLSFYDNKLV 252
Query: 121 MV 122
V
Sbjct: 253 KV 254
Score = 105 (42.0 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 37/140 (26%), Positives = 65/140 (46%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
S +VL + N + L L LT L N +++ L+ L+ L L N+
Sbjct: 72 SDTQVLLLQSNNIAKTV-DELQQLFNLTELDFSQNNFTNIKEVGLANLTQLTTLHLEENQ 130
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV-------T 123
I ++ L LSNL L ++HN + ++ + + LK+L L L+ N + ++ T
Sbjct: 131 ITEMNDYCLQDLSNLQELYINHNQISTISANAFSGLKNLLRLHLNSNKLKVIDSRWFDST 190
Query: 124 PDV----IGDNVTITTLTLS 139
P++ IG+N I L ++
Sbjct: 191 PNLEILMIGENPVIGILDMN 210
>WB|WBGene00004854 [details] [associations]
symbol:slt-1 species:6239 "Caenorhabditis elegans"
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=ISS] [GO:0005102 "receptor binding"
evidence=ISS;IPI] [GO:0033563 "dorsal/ventral axon guidance"
evidence=IGI;IMP] [GO:0001764 "neuron migration" evidence=IMP]
[GO:0048843 "negative regulation of axon extension involved in axon
guidance" evidence=IGI] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0001764
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005102 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR006207
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 HSSP:P00740
GO:GO:0033563 GeneTree:ENSGT00700000104083 EMBL:Z69792
GO:GO:0048843 EMBL:AL022270 PIR:D89711 PIR:T22025
RefSeq:NP_510437.2 ProteinModelPortal:G5EFX6 SMR:G5EFX6
EnsemblMetazoa:F40E10.4 GeneID:181562 KEGG:cel:CELE_F40E10.4
CTD:181562 WormBase:F40E10.4 OMA:KSISHIA NextBio:914450
Uniprot:G5EFX6
Length = 1410
Score = 137 (53.3 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 32/101 (31%), Positives = 55/101 (54%)
Query: 38 TSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRA 97
T L N I+ + H L +L+ LDL+HNR++++ + ++L+ L+TL +S+N LR
Sbjct: 707 TELYLDANYINEIPAHDLNRLYSLTKLDLSHNRLISLENNTFSNLTRLSTLIISYNKLRC 766
Query: 98 LTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTLTL 138
L L +L+ L L NDIS + + +IT + +
Sbjct: 767 LQPLAFNGLNALRILSLHGNDISFLPQSAFSNLTSITHIAV 807
Score = 129 (50.5 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 36/111 (32%), Positives = 56/111 (50%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L +LK L + NQ ++ + + L L L N+I L D+ F+ L+HLDL+ N
Sbjct: 67 LMNLKALQLMDNQIVTIHNQSFSSLVFLQKLRLSRNRIRHLPDNVFQNNLKLTHLDLSEN 126
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
I VS A L L L+L N + L ++I+ SL+ L L+ N ++
Sbjct: 127 DITVVSDAQLQGPEFLEVLNLDKNHIFCLENNVISSWVSLEVLTLNGNRLT 177
Score = 125 (49.1 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 37/125 (29%), Positives = 60/125 (48%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
L + N+ + + + L L +L NQI + + SF +L L L L+ NRI +
Sbjct: 49 LDLQDNEITKIGPNDFSSLMNLKALQLMDNQIVTIHNQSFSSLVFLQKLRLSRNRIRHLP 108
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITT 135
+ LT LDLS N + ++ + + L+ L LD N I + +VI V++
Sbjct: 109 DNVFQNNLKLTHLDLSENDITVVSDAQLQGPEFLEVLNLDKNHIFCLENNVISSWVSLEV 168
Query: 136 LTLSG 140
LTL+G
Sbjct: 169 LTLNG 173
Score = 116 (45.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 30/85 (35%), Positives = 42/85 (49%)
Query: 38 TSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRA 97
T + NQI + HSF+ L L+ LDL+ N I + + L NL TL L N +
Sbjct: 290 TEIRLEQNQISSIPSHSFKNLKNLTRLDLSKNIITEIQPKAFLGLHNLHTLVLYGNNITD 349
Query: 98 LTQDLITPLKSLQELRLDDNDISMV 122
L D L SLQ L L+ N ++ +
Sbjct: 350 LKSDTFEGLGSLQLLLLNANQLTCI 374
Score = 107 (42.7 bits), Expect = 0.00013, P = 0.00013
Identities = 36/125 (28%), Positives = 57/125 (45%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
+ + NQ SS+ + L LT L N I ++ +F L L L L N I +
Sbjct: 292 IRLEQNQISSIPSHSFKNLKNLTRLDLSKNIITEIQPKAFLGLHNLHTLVLYGNNITDLK 351
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVT-IT 134
+ L +L L L+ N L + + + L L L DNDI ++ +V N+T ++
Sbjct: 352 SDTFEGLGSLQLLLLNANQLTCIRRGTFDHVPKLSMLSLYDNDIKSIS-EVTFQNLTSLS 410
Query: 135 TLTLS 139
TL L+
Sbjct: 411 TLHLA 415
Score = 106 (42.4 bits), Expect = 0.00016, P = 0.00016
Identities = 31/105 (29%), Positives = 50/105 (47%)
Query: 16 LSIAHNQFSSVRRGA-LAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAV 74
L ++ N S+V + + L+ L L +N I + D SF LS L L L N++
Sbjct: 517 LLLSGNNISTVDLNSNIHVLENLEVLDLSNNHITFINDKSFEKLSKLRELRLNDNKLHHF 576
Query: 75 SGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
S L SNL LDLS N ++ + ++E+++ ND+
Sbjct: 577 SSMVLDEQSNLEILDLSGNNIQCFSSIFFNKATRIREIKVIGNDL 621
Score = 104 (41.7 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T L SL++L + NQ + +RRG + KL+ LS + N I + + +F+ L++LS L
Sbjct: 354 TFEGLGSLQLLLLNANQLTCIRRGTFDHVPKLSMLSLYDNDIKSISEVTFQNLTSLSTLH 413
Query: 66 LAHNRIV 72
LA N ++
Sbjct: 414 LAKNPLI 420
Score = 72 (30.4 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 24/79 (30%), Positives = 35/79 (44%)
Query: 62 SHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISM 121
+ L L N I + L L +LT LDLSHN L +L + + L L L + N +
Sbjct: 707 TELYLDANYINEIPAHDLNRLYSLTKLDLSHNRLISLENNTFSNLTRLSTLIISYNKLRC 766
Query: 122 VTPDVIGDNVTITTLTLSG 140
+ P + L+L G
Sbjct: 767 LQPLAFNGLNALRILSLHG 785
>TAIR|locus:2074633 [details] [associations]
symbol:RLP35 "AT3G11080" species:3702 "Arabidopsis
thaliana" [GO:0006952 "defense response" evidence=ISS] [GO:0016301
"kinase activity" evidence=ISS] [GO:0007165 "signal transduction"
evidence=IC] EMBL:CP002686 GenomeReviews:BA000014_GR eggNOG:COG4886
EMBL:AC009991 EMBL:AC073395 InterPro:IPR013210 Pfam:PF08263
HOGENOM:HOG000116562 ProtClustDB:CLSN2683476 IPI:IPI00520283
RefSeq:NP_187719.1 UniGene:At.39809 ProteinModelPortal:Q9SRL7
SMR:Q9SRL7 EnsemblPlants:AT3G11080.1 GeneID:820279
KEGG:ath:AT3G11080 TAIR:At3g11080 InParanoid:Q9SRL7 OMA:SNQFSGQ
PhylomeDB:Q9SRL7 Genevestigator:Q9SRL7 Uniprot:Q9SRL7
Length = 943
Score = 147 (56.8 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 44/131 (33%), Positives = 62/131 (47%)
Query: 9 RLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 68
RL +L+VL + N ++ L LTSL +NQ L S LS L+ L L+
Sbjct: 123 RLQNLRVLDLTQNDLDGEIPSSIGNLSHLTSLHLSYNQFLGLIPSSIENLSRLTSLHLSS 182
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
N+ +S+ +LS+LT+L+LS N I L +L L L ND P IG
Sbjct: 183 NQFSGQIPSSIGNLSHLTSLELSSNQFSGQIPSSIGNLSNLTFLSLPSNDFFGQIPSSIG 242
Query: 129 DNVTITTLTLS 139
+ +T L LS
Sbjct: 243 NLARLTYLYLS 253
Score = 118 (46.6 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 40/134 (29%), Positives = 59/134 (44%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
++ LS L L ++ NQFS ++ L LTSL NQ S LS L+ L
Sbjct: 168 SIENLSRLTSLHLSSNQFSGQIPSSIGNLSHLTSLELSSNQFSGQIPSSIGNLSNLTFLS 227
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
L N +S+ +L+ LT L LS+N L L L++D N +S P
Sbjct: 228 LPSNDFFGQIPSSIGNLARLTYLYLSYNNFVGEIPSSFGNLNQLIVLQVDSNKLSGNVPI 287
Query: 126 VIGDNVTITTLTLS 139
+ + ++ L LS
Sbjct: 288 SLLNLTRLSALLLS 301
Score = 116 (45.9 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 38/124 (30%), Positives = 56/124 (45%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
++ LS L L +++NQF + ++ L +LTSL NQ S LS L+ L+
Sbjct: 144 SIGNLSHLTSLHLSYNQFLGLIPSSIENLSRLTSLHLSSNQFSGQIPSSIGNLSHLTSLE 203
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
L+ N+ +S+ +LSNLT L L N I L L L L N+ P
Sbjct: 204 LSSNQFSGQIPSSIGNLSNLTFLSLPSNDFFGQIPSSIGNLARLTYLYLSYNNFVGEIPS 263
Query: 126 VIGD 129
G+
Sbjct: 264 SFGN 267
Score = 110 (43.8 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 38/135 (28%), Positives = 63/135 (46%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID-VLEDHSFRALSTLSHLDLAH 68
LS+L ++N F+ +L + L L NQ++ L + + S L +L +
Sbjct: 316 LSNLMDFEASNNAFTGTLPSSLFNIPPLIRLDLSDNQLNGTLHFGNISSPSNLQYLIIGS 375
Query: 69 NRIVAVSGASLAHLSNLTTLDLSH-NF-LRALTQDLITPLKSLQELRLDDNDISMVT-PD 125
N + SL+ NLT DLSH N R + + + LKSL +LRL + + D
Sbjct: 376 NNFIGTIPRSLSRFVNLTLFDLSHLNTQCRPVDFSIFSHLKSLDDLRLSYLTTTTIDLND 435
Query: 126 VIGDNVTITTLTLSG 140
++ T+ +L +SG
Sbjct: 436 ILPYFKTLRSLDISG 450
Score = 109 (43.4 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 35/109 (32%), Positives = 50/109 (45%)
Query: 30 ALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLD 89
+L L L L N +D S LS L+ L L++N+ + + +S+ +LS LT+L
Sbjct: 120 SLFRLQNLRVLDLTQNDLDGEIPSSIGNLSHLTSLHLSYNQFLGLIPSSIENLSRLTSLH 179
Query: 90 LSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTLTL 138
LS N I L L L L N S P IG+ +T L+L
Sbjct: 180 LSSNQFSGQIPSSIGNLSHLTSLELSSNQFSGQIPSSIGNLSNLTFLSL 228
Score = 105 (42.0 bits), Expect = 0.00013, P = 0.00013
Identities = 32/85 (37%), Positives = 42/85 (49%)
Query: 55 FRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRL 114
FR L L LDL N + +S+ +LS+LT+L LS+N L I L L L L
Sbjct: 122 FR-LQNLRVLDLTQNDLDGEIPSSIGNLSHLTSLHLSYNQFLGLIPSSIENLSRLTSLHL 180
Query: 115 DDNDISMVTPDVIGDNVTITTLTLS 139
N S P IG+ +T+L LS
Sbjct: 181 SSNQFSGQIPSSIGNLSHLTSLELS 205
>UNIPROTKB|F1NN41 [details] [associations]
symbol:PXDN "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004601 "peroxidase activity" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] [GO:0030198 "extracellular matrix organization"
evidence=IEA] [GO:0031012 "extracellular matrix" evidence=IEA]
[GO:0042744 "hydrogen peroxide catabolic process" evidence=IEA]
InterPro:IPR001611 InterPro:IPR001007 InterPro:IPR002007
InterPro:IPR007110 InterPro:IPR010255 InterPro:IPR019791
Pfam:PF00093 Pfam:PF03098 PRINTS:PR00457 PROSITE:PS01208
PROSITE:PS50184 PROSITE:PS50292 PROSITE:PS50835 PROSITE:PS51450
SMART:SM00214 GO:GO:0005783 GO:GO:0005615 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0030198 GO:GO:0020037 GO:GO:0031012 GO:GO:0004601
InterPro:IPR013098 Pfam:PF07679 GO:GO:0042744 SUPFAM:SSF48113
GO:GO:0005201 Gene3D:1.10.640.10 GeneTree:ENSGT00550000074325
OMA:EPVITWN EMBL:AADN02002863 EMBL:AADN02002864 IPI:IPI00586612
Ensembl:ENSGALT00000026413 Uniprot:F1NN41
Length = 1416
Score = 149 (57.5 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 36/110 (32%), Positives = 57/110 (51%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
RRL +L L + +NQ + GA L+ L L + N+I ++ +F+ L++L L L
Sbjct: 19 RRLKNLNTLLLNNNQIKRIPSGAFEDLENLKYLYLYKNEIQSIDRQAFKGLASLEQLYLH 78
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
N+I + S HL L L L +N + L + L+S++ LRLD N
Sbjct: 79 FNQIETLDPESFTHLPKLERLFLHNNRIAHLIPGTFSHLESMKRLRLDSN 128
Score = 129 (50.5 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 32/86 (37%), Positives = 44/86 (51%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L +LK L + N+ S+ R A GL L L H NQI+ L+ SF L L L L +N
Sbjct: 45 LENLKYLYLYKNEIQSIDRQAFKGLASLEQLYLHFNQIETLDPESFTHLPKLERLFLHNN 104
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFL 95
RI + + +HL ++ L L N L
Sbjct: 105 RIAHLIPGTFSHLESMKRLRLDSNAL 130
Score = 105 (42.0 bits), Expect = 0.00021, P = 0.00021
Identities = 29/104 (27%), Positives = 49/104 (47%)
Query: 21 NQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLA 80
N+ ++ G L L +L ++NQI + +F L L +L L N I ++ +
Sbjct: 8 NRIKEIQPGEFRRLKNLNTLLLNNNQIKRIPSGAFEDLENLKYLYLYKNEIQSIDRQAFK 67
Query: 81 HLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTP 124
L++L L L N + L + T L L+ L L +N I+ + P
Sbjct: 68 GLASLEQLYLHFNQIETLDPESFTHLPKLERLFLHNNRIAHLIP 111
>UNIPROTKB|P40197 [details] [associations]
symbol:GP5 "Platelet glycoprotein V" species:9606 "Homo
sapiens" [GO:0005518 "collagen binding" evidence=IEA] [GO:0007160
"cell-matrix adhesion" evidence=IEA] [GO:0010544 "negative
regulation of platelet activation" evidence=IEA] [GO:0005887
"integral to plasma membrane" evidence=TAS] [GO:0007155 "cell
adhesion" evidence=NAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007596 "blood coagulation" evidence=TAS] [GO:0007597 "blood
coagulation, intrinsic pathway" evidence=TAS] [GO:0030168 "platelet
activation" evidence=TAS] Reactome:REACT_604 Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0030168 GO:GO:0005887
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007597 GO:GO:0007155 GO:GO:0007160
InterPro:IPR000372 SMART:SM00013 GO:GO:0010544 EMBL:L11238
EMBL:Z23091 IPI:IPI00027410 PIR:A48030 RefSeq:NP_004479.1
UniGene:Hs.73734 ProteinModelPortal:P40197 SMR:P40197 STRING:P40197
PhosphoSite:P40197 DMDM:729616 PaxDb:P40197 PeptideAtlas:P40197
PRIDE:P40197 DNASU:2814 Ensembl:ENST00000323007
Ensembl:ENST00000401815 GeneID:2814 KEGG:hsa:2814 UCSC:uc003ftv.1
CTD:2814 GeneCards:GC03M194115 HGNC:HGNC:4443 MIM:173511
neXtProt:NX_P40197 PharmGKB:PA28823 HOGENOM:HOG000112798
HOVERGEN:HBG005906 InParanoid:P40197 KO:K06260 OMA:AMIKIGQ
OrthoDB:EOG4JHCFD PhylomeDB:P40197 GenomeRNAi:2814 NextBio:11093
PMAP-CutDB:P40197 ArrayExpress:P40197 Bgee:P40197 CleanEx:HS_GP5
Genevestigator:P40197 GermOnline:ENSG00000178732 Uniprot:P40197
Length = 560
Score = 144 (55.7 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 38/111 (34%), Positives = 57/111 (51%)
Query: 8 RRLSSLKVLSIAHN-QFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
R LS L+ L + + + S++ +GA GL +L L+ H N + L D R L L + L
Sbjct: 311 RNLSRLRYLGVTLSPRLSALPQGAFQGLGELQVLALHSNGLTALPDGLLRGLGKLRQVSL 370
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
NR+ A+ A +LS+L ++ L HN L L D+ L L E+ L N
Sbjct: 371 RRNRLRALPRALFRNLSSLESVQLDHNQLETLPGDVFGALPRLTEVLLGHN 421
Score = 128 (50.1 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 41/140 (29%), Positives = 66/140 (47%)
Query: 7 VRRLSSLKV-LSIAHNQFSSVRRGAL-----AGLDKLTSLSCHHNQIDVLEDHSFRALST 60
V R+S+L + ++ H + RG L +G+ L L + I + +F L
Sbjct: 40 VARISALGLPTNLTHILLFGMGRGVLQSQSFSGMTVLQRLMISDSHISAVAPGTFSDLIK 99
Query: 61 LSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
L L L+ N+I + GA L + L L L HN LR + Q++ L +LQEL L+ N +
Sbjct: 100 LKTLRLSRNKITHLPGALLDKMVLLEQLFLDHNALRGIDQNMFQKLVNLQELALNQNQLD 159
Query: 121 MVTPDVIGDNVTITTLTLSG 140
+ + + + L LSG
Sbjct: 160 FLPASLFTNLENLKLLDLSG 179
Score = 122 (48.0 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 34/118 (28%), Positives = 58/118 (49%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L +LK+L ++ N + + +G L KL L H N++ L+ +L L+ L N
Sbjct: 169 LENLKLLDLSGNNLTHLPKGLLGAQAKLERLLLHSNRLVSLDSGLLNSLGALTELQFHRN 228
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI 127
I +++ + L NL++L LS N L L L +L L L +N ++ + P V+
Sbjct: 229 HIRSIAPGAFDRLPNLSSLTLSRNHLAFLPSALFLHSHNLTLLTLFENPLAEL-PGVL 285
Score = 122 (48.0 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 37/127 (29%), Positives = 56/127 (44%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
L+ L + HN + + L L L+ + NQ+D L F L L LDL+ N +
Sbjct: 124 LEQLFLDHNALRGIDQNMFQKLVNLQELALNQNQLDFLPASLFTNLENLKLLDLSGNNLT 183
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVT 132
+ L + L L L N L +L L+ L +L EL+ N I + P
Sbjct: 184 HLPKGLLGAQAKLERLLLHSNRLVSLDSGLLNSLGALTELQFHRNHIRSIAPGAFDRLPN 243
Query: 133 ITTLTLS 139
+++LTLS
Sbjct: 244 LSSLTLS 250
Score = 119 (46.9 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 30/87 (34%), Positives = 45/87 (51%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L+VL++ N +++ G L GL KL +S N++ L FR LS+L + L HN
Sbjct: 338 LGELQVLALHSNGLTALPDGLLRGLGKLRQVSLRRNRLRALPRALFRNLSSLESVQLDHN 397
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLR 96
++ + G L LT + L HN R
Sbjct: 398 QLETLPGDVFGALPRLTEVLLGHNSWR 424
Score = 119 (46.9 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 36/105 (34%), Positives = 48/105 (45%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
+ L+ L + N+ S+ G L L LT L H N I + +F L LS L L+ N
Sbjct: 194 AKLERLLLHSNRLVSLDSGLLNSLGALTELQFHRNHIRSIAPGAFDRLPNLSSLTLSRNH 253
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLD 115
+ + A H NLT L L N L L L + LQEL L+
Sbjct: 254 LAFLPSALFLHSHNLTLLTLFENPLAELPGVLFGEMGGLQELWLN 298
Score = 113 (44.8 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 36/130 (27%), Positives = 58/130 (44%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN-QIDVLEDHSFRALSTLSHLDLAH 68
+ L+ L + Q ++ A L +L L + ++ L +F+ L L L L
Sbjct: 289 MGGLQELWLNRTQLRTLPAAAFRNLSRLRYLGVTLSPRLSALPQGAFQGLGELQVLALHS 348
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
N + A+ L L L + L N LRAL + L L SL+ ++LD N + + DV G
Sbjct: 349 NGLTALPDGLLRGLGKLRQVSLRRNRLRALPRALFRNLSSLESVQLDHNQLETLPGDVFG 408
Query: 129 DNVTITTLTL 138
+T + L
Sbjct: 409 ALPRLTEVLL 418
Score = 111 (44.1 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 36/129 (27%), Positives = 59/129 (45%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
++ L+ L I+ + S+V G + L KL +L N+I L + L L L HN
Sbjct: 73 MTVLQRLMISDSHISAVAPGTFSDLIKLKTLRLSRNKITHLPGALLDKMVLLEQLFLDHN 132
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+ + L NL L L+ N L L L T L++L+ L L N+++ + ++G
Sbjct: 133 ALRGIDQNMFQKLVNLQELALNQNQLDFLPASLFTNLENLKLLDLSGNNLTHLPKGLLGA 192
Query: 130 NVTITTLTL 138
+ L L
Sbjct: 193 QAKLERLLL 201
Score = 111 (44.1 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 39/134 (29%), Positives = 62/134 (46%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDK---LTSLSCHHNQIDVLEDHSFRALSTLS 62
T L LK L ++ N+ + + GAL LDK L L HN + ++ + F+ L L
Sbjct: 93 TFSDLIKLKTLRLSRNKITHLP-GAL--LDKMVLLEQLFLDHNALRGIDQNMFQKLVNLQ 149
Query: 63 HLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
L L N++ + + +L NL LDLS N L L + L+ L+ L L N + +
Sbjct: 150 ELALNQNQLDFLPASLFTNLENLKLLDLSGNNLTHLPKGLLGAQAKLERLLLHSNRLVSL 209
Query: 123 TPDVIGDNVTITTL 136
++ +T L
Sbjct: 210 DSGLLNSLGALTEL 223
Score = 105 (42.0 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 33/131 (25%), Positives = 56/131 (42%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
++L +L+ L++ NQ + L+ L L N + L A + L L L
Sbjct: 143 QKLVNLQELALNQNQLDFLPASLFTNLENLKLLDLSGNNLTHLPKGLLGAQAKLERLLLH 202
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI 127
NR+V++ L L LT L N +R++ L +L L L N ++ + +
Sbjct: 203 SNRLVSLDSGLLNSLGALTELQFHRNHIRSIAPGAFDRLPNLSSLTLSRNHLAFLPSALF 262
Query: 128 GDNVTITTLTL 138
+ +T LTL
Sbjct: 263 LHSHNLTLLTL 273
>FB|FBgn0026760 [details] [associations]
symbol:Tehao "Tehao" species:7227 "Drosophila melanogaster"
[GO:0004888 "transmembrane signaling receptor activity"
evidence=IEA;ISS;NAS] [GO:0005886 "plasma membrane" evidence=NAS]
[GO:0007165 "signal transduction" evidence=ISS] [GO:0016021
"integral to membrane" evidence=ISS] [GO:0006967 "positive
regulation of antifungal peptide biosynthetic process"
evidence=NAS;TAS] [GO:0008063 "Toll signaling pathway"
evidence=IEA;TAS] [GO:0045087 "innate immune response"
evidence=IEA] [GO:0050830 "defense response to Gram-positive
bacterium" evidence=IEA] [GO:0006963 "positive regulation of
antibacterial peptide biosynthetic process" evidence=IEA]
[GO:0007352 "zygotic specification of dorsal/ventral axis"
evidence=IEA] [GO:0009620 "response to fungus" evidence=IEA]
[GO:0002121 "inter-male aggressive behavior" evidence=IMP]
Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR027202 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 GO:GO:0016021 InterPro:IPR003591 SMART:SM00369
GO:GO:0045087 GO:GO:0005622 GO:GO:0002121 InterPro:IPR000372
SMART:SM00013 GO:GO:0004888 GO:GO:0008063 GO:GO:0006967
InterPro:IPR026906 Pfam:PF13306 SUPFAM:SSF52200
PANTHER:PTHR24371:SF0 HSSP:O60603 FlyBase:FBgn0026760 EMBL:AF247767
ProteinModelPortal:Q9NBK8 SMR:Q9NBK8 STRING:Q9NBK8 PRIDE:Q9NBK8
InParanoid:Q9NBK8 ArrayExpress:Q9NBK8 Bgee:Q9NBK8 Uniprot:Q9NBK8
Length = 795
Score = 146 (56.5 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 43/131 (32%), Positives = 68/131 (51%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLE--DHSFRALSTLSHLDLA 67
+++L+ + +A + SSV R G +KL + + N D++E F L LDL+
Sbjct: 259 MTNLEEVRLA-SATSSVNRSMFKGTNKLQLIKMNGND-DLMELPGEIFLDQVNLKTLDLS 316
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI 127
N IV + L NLT LDLS N L L+ + PL SL LRL+ N ++ ++P V
Sbjct: 317 CNAIVTLHEDVFKGLGNLTLLDLSKNRLTNLSSTIFAPLTSLNVLRLNKNSLTAMSPSVF 376
Query: 128 GDNVTITTLTL 138
D V++ + +
Sbjct: 377 QDVVSLNYIEM 387
>UNIPROTKB|F1NRZ3 [details] [associations]
symbol:RTN4R "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IEA] [GO:0009986 "cell surface"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005783
GO:GO:0005886 GO:GO:0009986 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101803 OMA:PLWAWLQ EMBL:AADN02043142
IPI:IPI00581464 Ensembl:ENSGALT00000012536 Uniprot:F1NRZ3
Length = 483
Score = 143 (55.4 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 41/110 (37%), Positives = 54/110 (49%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
R L SL+ L + N ++ L LT L H N+I L ++ FR L L L L
Sbjct: 151 RGLFSLQYLYLQDNNLQNLLDDTFIDLANLTYLFLHGNKIKSLSENVFRGLINLDRLLLH 210
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
NR+ V S L + TL L +N L LT + + PL SLQ LRL+ N
Sbjct: 211 QNRVSLVHRRSFHDLGKVMTLYLFNNNLTVLTGETMAPLVSLQYLRLNGN 260
Score = 131 (51.2 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 38/122 (31%), Positives = 59/122 (48%)
Query: 20 HNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN-RIVAVSGAS 78
+N+ + VR + +T L H N I ++E +F L+ L LDL+ N + +++ +
Sbjct: 66 NNKITLVRSTSFTSCRNMTILWIHSNNISLIEPGAFYGLNKLEELDLSDNTNLKSINPVT 125
Query: 79 LAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTLTL 138
L +L TL L L L+ L L SLQ L L DN++ + D D +T L L
Sbjct: 126 FRGLVHLHTLHLDRCGLMELSTGLFRGLFSLQYLYLQDNNLQNLLDDTFIDLANLTYLFL 185
Query: 139 SG 140
G
Sbjct: 186 HG 187
>UNIPROTKB|A6NM62 [details] [associations]
symbol:LRRC53 "Leucine-rich repeat-containing protein 53"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0016021
GO:GO:0008565 InterPro:IPR003591 SMART:SM00369 GO:GO:0006610
EMBL:AC105271 IPI:IPI00252944 ProteinModelPortal:A6NM62 SMR:A6NM62
PhosphoSite:A6NM62 PaxDb:A6NM62 PRIDE:A6NM62
Ensembl:ENST00000416014 GeneCards:GC01M074935 HGNC:HGNC:25255
neXtProt:NX_A6NM62 eggNOG:NOG146774 HOGENOM:HOG000113373
InParanoid:A6NM62 OrthoDB:EOG44XJFZ ArrayExpress:A6NM62 Bgee:A6NM62
Genevestigator:A6NM62 Uniprot:A6NM62
Length = 1247
Score = 148 (57.2 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 44/120 (36%), Positives = 62/120 (51%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDV--LEDHSFRALSTLSHLDLA 67
L +L +LS++ N V+ AL GL L +L HNQI L DH+F L +L L L+
Sbjct: 56 LFNLALLSLSRNGIEDVQEDALHGLTMLRTLLLEHNQISSSSLTDHTFSKLHSLQVLVLS 115
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLI--TPLKSLQELRLDDNDISMVTPD 125
+N + + G+ + S LT L L N + LT T L SL+ L L +N IS + D
Sbjct: 116 NNALRTLRGSWFRNTSGLTRLQLDGNQITNLTDSSFGGTNLHSLRYLDLSNNFISYIGKD 175
Score = 140 (54.3 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 44/117 (37%), Positives = 59/117 (50%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRA--LSTLSH 63
T +L SL+VL +++N ++R LT L NQI L D SF L +L +
Sbjct: 102 TFSKLHSLQVLVLSNNALRTLRGSWFRNTSGLTRLQLDGNQITNLTDSSFGGTNLHSLRY 161
Query: 64 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
LDL++N I + + L L +DLS N L A D+ TPLK L L LD N S
Sbjct: 162 LDLSNNFISYIGKDAFRPLPQLQEVDLSRNRL-AHMPDVFTPLKQLILLSLDKNQWS 217
Score = 136 (52.9 bits), Expect = 9.1e-08, P = 9.1e-08
Identities = 41/121 (33%), Positives = 63/121 (52%)
Query: 10 LSSLKVLSIAHNQFSS--VRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
L+ L+ L + HNQ SS + + L L L +N + L FR S L+ L L
Sbjct: 80 LTMLRTLLLEHNQISSSSLTDHTFSKLHSLQVLVLSNNALRTLRGSWFRNTSGLTRLQLD 139
Query: 68 HNRIVAVSGASLA--HLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
N+I ++ +S +L +L LDLS+NF+ + +D PL LQE+ L N ++ + PD
Sbjct: 140 GNQITNLTDSSFGGTNLHSLRYLDLSNNFISYIGKDAFRPLPQLQEVDLSRNRLAHM-PD 198
Query: 126 V 126
V
Sbjct: 199 V 199
Score = 113 (44.8 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 37/117 (31%), Positives = 55/117 (47%)
Query: 14 KVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVA 73
+VL I SS+ L+ L L LS N I+ +++ + L+ L L L HN+I +
Sbjct: 36 RVLIITDGYLSSIESTNLSLLFNLALLSLSRNGIEDVQEDALHGLTMLRTLLLEHNQISS 95
Query: 74 VS--GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
S + + L +L L LS+N LR L L L+LD N I+ +T G
Sbjct: 96 SSLTDHTFSKLHSLQVLVLSNNALRTLRGSWFRNTSGLTRLQLDGNQITNLTDSSFG 152
>TAIR|locus:2090754 [details] [associations]
symbol:RLP43 "receptor like protein 43" species:3702
"Arabidopsis thaliana" [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016301 "kinase activity" evidence=ISS] [GO:0007165 "signal
transduction" evidence=IC] Pfam:PF00560 InterPro:IPR001611
EMBL:CP002686 GenomeReviews:BA000014_GR eggNOG:COG4886
EMBL:AP000386 InterPro:IPR013210 Pfam:PF08263 HOGENOM:HOG000116562
UniGene:At.42708 UniGene:At.53549 IPI:IPI00532642
RefSeq:NP_001154652.1 RefSeq:NP_189531.1 ProteinModelPortal:Q9LJW7
SMR:Q9LJW7 EnsemblPlants:AT3G28890.1 EnsemblPlants:AT3G28890.2
GeneID:822523 KEGG:ath:AT3G28890 TAIR:At3g28890 InParanoid:Q9LJW7
OMA:DEEVISW PhylomeDB:Q9LJW7 ProtClustDB:CLSN2684079
Genevestigator:Q9LJW7 Uniprot:Q9LJW7
Length = 711
Score = 145 (56.1 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 47/138 (34%), Positives = 67/138 (48%)
Query: 3 IWCTVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLS 62
I ++ LS L L ++ N FS ++ L LT L + NQ S LS L+
Sbjct: 137 IMSSIENLSHLTYLDLSFNHFSGQVPSSIGNLSHLTFLDLYCNQFSGQVPSSIGNLSHLT 196
Query: 63 HLDLAHNRIVAVSGASLAHLSNLTTLDLS-HNFLRALTQDLITPLKSLQELRLDDNDISM 121
L+L+ NR +S+ LS+LTTL+L +NFL + I L +L L L N+ S
Sbjct: 197 TLELSFNRFFGQFPSSIGGLSHLTTLNLFVNNFLGQIPSS-IGNLSNLTSLYLCKNNFSG 255
Query: 122 VTPDVIGDNVTITTLTLS 139
P IG+ +T L LS
Sbjct: 256 QIPSFIGNLSQLTRLDLS 273
Score = 121 (47.7 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 41/133 (30%), Positives = 58/133 (43%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
++R L L L ++ N F ++ L LT L N S LS L+ LD
Sbjct: 116 SIRNLHFLTTLDLSFNDFKGQIMSSIENLSHLTYLDLSFNHFSGQVPSSIGNLSHLTFLD 175
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
L N+ +S+ +LS+LTTL+LS N I L L L L N+ P
Sbjct: 176 LYCNQFSGQVPSSIGNLSHLTTLELSFNRFFGQFPSSIGGLSHLTTLNLFVNNFLGQIPS 235
Query: 126 VIGDNVTITTLTL 138
IG+ +T+L L
Sbjct: 236 SIGNLSNLTSLYL 248
Score = 106 (42.4 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 35/113 (30%), Positives = 50/113 (44%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
++ LS L L + NQFS ++ L LT+L N+ S LS L+ L+
Sbjct: 164 SIGNLSHLTFLDLYCNQFSGQVPSSIGNLSHLTTLELSFNRFFGQFPSSIGGLSHLTTLN 223
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDND 118
L N + +S+ +LSNLT+L L N I L L L L N+
Sbjct: 224 LFVNNFLGQIPSSIGNLSNLTSLYLCKNNFSGQIPSFIGNLSQLTRLDLSSNN 276
Score = 104 (41.7 bits), Expect = 0.00012, P = 0.00012
Identities = 36/100 (36%), Positives = 46/100 (46%)
Query: 40 LSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALT 99
LSC + + S R L L+ LDL+ N +S+ +LS+LT LDLS N
Sbjct: 102 LSCSYLHGRFHSNSSIRNLHFLTTLDLSFNDFKGQIMSSIENLSHLTYLDLSFNHFSGQV 161
Query: 100 QDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTLTLS 139
I L L L L N S P IG+ +TTL LS
Sbjct: 162 PSSIGNLSHLTFLDLYCNQFSGQVPSSIGNLSHLTTLELS 201
>UNIPROTKB|Q2LDA0 [details] [associations]
symbol:TLR5 "Toll-like receptor 5" species:9913 "Bos
taurus" [GO:0071260 "cellular response to mechanical stimulus"
evidence=IEA] [GO:0034123 "positive regulation of toll-like
receptor signaling pathway" evidence=IEA] [GO:0032757 "positive
regulation of interleukin-8 production" evidence=IEA] [GO:0005149
"interleukin-1 receptor binding" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0050707 "regulation of
cytokine secretion" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0042742 "defense response to bacterium"
evidence=IEA] [GO:0034146 "toll-like receptor 5 signaling pathway"
evidence=IEA] [GO:0004888 "transmembrane signaling receptor
activity" evidence=IEA] [GO:0002755 "MyD88-dependent toll-like
receptor signaling pathway" evidence=IEA] Pfam:PF00560
InterPro:IPR000157 InterPro:IPR001611 InterPro:IPR027176
Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
GO:GO:0016021 GO:GO:0007165 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005622 GO:GO:0032757
GO:GO:0071260 GeneTree:ENSGT00700000104185 SUPFAM:SSF52200
GO:GO:0034123 HOGENOM:HOG000008675 HOVERGEN:HBG023182
PANTHER:PTHR24365:SF7 EMBL:DAAA02042627 EMBL:DQ335128 EMBL:EU006637
EMBL:EU006638 EMBL:EU006639 EMBL:EU006640 EMBL:JQ805125
EMBL:JQ805126 EMBL:JQ805127 EMBL:JQ805128 EMBL:JQ805129
EMBL:JQ805130 EMBL:JQ805131 EMBL:JQ805132 EMBL:JQ805133
EMBL:JQ805134 EMBL:JQ805136 EMBL:JQ805137 IPI:IPI00694158
UniGene:Bt.66307 STRING:Q2LDA0 Ensembl:ENSBTAT00000000604
InParanoid:Q2LDA0 OMA:DHINNIR Uniprot:Q2LDA0
Length = 858
Score = 146 (56.5 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 38/117 (32%), Positives = 61/117 (52%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L LKVL++A+N+ +S+ R A GLD L L+ +N + L ++ F L ++++DL N
Sbjct: 311 LQELKVLNLAYNKINSISRNAFYGLDNLQVLNISYNLLGELYNYDFDGLPKVAYIDLQKN 370
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDV 126
I + + L L TLDL N L+ I L S+ + L N + M P++
Sbjct: 371 HIGIIQDKTFKFLGKLNTLDLRDNALKT-----IYFLPSIPNIFLSGNKL-MTLPNI 421
Score = 142 (55.0 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 48/145 (33%), Positives = 78/145 (53%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSL---SCHHNQIDVLEDHSFRALSTLSHL 64
R L +L++L + +Q + + A GL LT L SC + VL+D FR L++L+HL
Sbjct: 92 RNLPNLRILDLGGSQINFLHPDAFQGLPHLTKLRLFSCGLSDA-VLKDGYFRNLASLTHL 150
Query: 65 DLAHNRIVAVS-GASLAHLSNLTTLDLSHNFLRALTQDLITPL--KSLQELRLDDNDI-S 120
DL+ N+I ++ S L++L ++D S N + + + PL K+L L L DN + S
Sbjct: 151 DLSKNKIQSLYLHPSFRELNSLKSIDFSFNKIPIVCEQEFKPLQGKTLSFLSLADNQLYS 210
Query: 121 MVTPD---VIGD--NVTITTLTLSG 140
V+ D + N+ + TL +SG
Sbjct: 211 RVSVDWNKCLNPFRNMVLETLDVSG 235
>UNIPROTKB|D6RA51 [details] [associations]
symbol:TLR3 "Toll-like receptor 3, isoform CRA_b"
species:9606 "Homo sapiens" [GO:0002756 "MyD88-independent
toll-like receptor signaling pathway" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0004888
"transmembrane signaling receptor activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0032722
"positive regulation of chemokine production" evidence=IEA]
[GO:0034138 "toll-like receptor 3 signaling pathway" evidence=IEA]
[GO:0043330 "response to exogenous dsRNA" evidence=IEA] [GO:0045087
"innate immune response" evidence=IEA] [GO:0050729 "positive
regulation of inflammatory response" evidence=IEA] [GO:0051607
"defense response to virus" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR027173 PROSITE:PS51450
InterPro:IPR003591 SMART:SM00369 EMBL:CH471056 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306 PANTHER:PTHR24365:SF5
UniGene:Hs.657724 HGNC:HGNC:11849 EMBL:AC104070 IPI:IPI00964068
SMR:D6RA51 Ensembl:ENST00000513189 Uniprot:D6RA51
Length = 351
Score = 140 (54.3 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 41/133 (30%), Positives = 59/133 (44%)
Query: 9 RLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 68
R S L L + N S + L L L+ HN++ L D +F + L+ L L
Sbjct: 73 RYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMS 132
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
N I + NL TLDLSHN L + L++LQEL L +N I + + +
Sbjct: 133 NSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELD 192
Query: 129 --DNVTITTLTLS 139
N ++ L LS
Sbjct: 193 IFANSSLKKLELS 205
Score = 139 (54.0 bits), Expect = 6.7e-09, P = 6.7e-09
Identities = 39/119 (32%), Positives = 62/119 (52%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
++L LKVL++ HN+ S + A LT L N I ++++ F L LDL+
Sbjct: 96 QKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLS 155
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRAL-TQDL-ITPLKSLQELRLDDNDISMVTP 124
HN + + + L NL L LS+N ++AL +++L I SL++L L N I +P
Sbjct: 156 HNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSP 214
Score = 123 (48.4 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 33/110 (30%), Positives = 52/110 (47%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
+++ VL++ HNQ + +LTSL N I LE + L L L+L HN
Sbjct: 51 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNE 110
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
+ +S + A +NLT L L N ++ + + K+L L L N +S
Sbjct: 111 LSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLS 160
Score = 108 (43.1 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 37/134 (27%), Positives = 65/134 (48%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI--DVLEDHSFRALST-LSHLDLA 67
SSLK L ++ NQ G + +L L ++ Q+ + E +T + +L L+
Sbjct: 197 SSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLS 256
Query: 68 HNRIVAVSGASLAHL--SNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
++++ S + L +NLT LDLS+N L LK L+ L ++DNDI + +
Sbjct: 257 NSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVW-------LKCLEHLNMEDNDIPGIKSN 309
Query: 126 VIGDNVTITTLTLS 139
+ + + L+LS
Sbjct: 310 MFTGLINLKYLSLS 323
>UNIPROTKB|E1BB32 [details] [associations]
symbol:GP1BA "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042730 "fibrinolysis" evidence=IEA] [GO:0031362
"anchored to external side of plasma membrane" evidence=IEA]
[GO:0007599 "hemostasis" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0000902 "cell morphogenesis" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0042730 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007155
GO:GO:0000902 InterPro:IPR000372 SMART:SM00013 InterPro:IPR025875
Pfam:PF12799 GO:GO:0007599 GO:GO:0031362 CTD:2811 KO:K06261
GeneTree:ENSGT00690000102197 OMA:VPRAWLL EMBL:DAAA02048753
IPI:IPI00715197 RefSeq:XP_002695841.1 UniGene:Bt.44143
Ensembl:ENSBTAT00000006460 GeneID:504977 KEGG:bta:504977
NextBio:20866919 Uniprot:E1BB32
Length = 650
Score = 144 (55.7 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 44/133 (33%), Positives = 71/133 (53%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
+V LS L L + +Q +S++ A A L +L L+ HN++ L RAL LS LD
Sbjct: 66 SVLNLSQLTELFLGKSQLTSLQ--ADAKLPRLEVLNLAHNKLRSLPKLG-RALPVLSILD 122
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
++ N + ++ +L LS L L L N LR L +L+ P L++L L +ND+ + P+
Sbjct: 123 VSFNELTSLPSDTLHGLSRLQELYLRGNQLRTLPPELLVPTPHLKKLSLAENDLQELPPE 182
Query: 126 VIGDNVTITTLTL 138
++ + TL L
Sbjct: 183 LLKGLEELDTLYL 195
Score = 114 (45.2 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 35/125 (28%), Positives = 62/125 (49%)
Query: 15 VLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAV 74
+L + N + ++ L +LT L +Q+ L+ + L L L+LAHN++ ++
Sbjct: 51 ILHLGENPLGTFSMASVLNLSQLTELFLGKSQLTSLQADA--KLPRLEVLNLAHNKLRSL 108
Query: 75 SGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTIT 134
A L L+ LD+S N L +L D + L LQEL L N + + P+++ +
Sbjct: 109 PKLGRA-LPVLSILDVSFNELTSLPSDTLHGLSRLQELYLRGNQLRTLPPELLVPTPHLK 167
Query: 135 TLTLS 139
L+L+
Sbjct: 168 KLSLA 172
>UNIPROTKB|Q9ULH4 [details] [associations]
symbol:LRFN2 "Leucine-rich repeat and fibronectin type-III
domain-containing protein 2" species:9606 "Homo sapiens"
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10
InterPro:IPR013783 EMBL:CH471081 GO:GO:0030054 GO:GO:0045211
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 MEROPS:I43.001
HOGENOM:HOG000237343 HOVERGEN:HBG052352 EMBL:AB033072 EMBL:AK291474
EMBL:AL591063 EMBL:BC142616 IPI:IPI00008107 RefSeq:NP_065788.1
UniGene:Hs.250015 ProteinModelPortal:Q9ULH4 SMR:Q9ULH4
STRING:Q9ULH4 PhosphoSite:Q9ULH4 DMDM:62286951 PaxDb:Q9ULH4
PRIDE:Q9ULH4 Ensembl:ENST00000338305 GeneID:57497 KEGG:hsa:57497
UCSC:uc003oph.1 CTD:57497 GeneCards:GC06M040406 HGNC:HGNC:21226
HPA:HPA013653 MIM:612808 neXtProt:NX_Q9ULH4 PharmGKB:PA134913285
eggNOG:NOG311542 InParanoid:Q9ULH4 KO:K16355 OMA:HWVAPDD
OrthoDB:EOG469QT6 ChiTaRS:LRFN2 GenomeRNAi:57497 NextBio:63812
Bgee:Q9ULH4 CleanEx:HS_LRFN2 Genevestigator:Q9ULH4
GermOnline:ENSG00000156564 Uniprot:Q9ULH4
Length = 789
Score = 145 (56.1 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 40/129 (31%), Positives = 61/129 (47%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRA-LSTLSHLDLAH 68
L SL+ L + N+ S+ L GL L L ++NQ+ + D +F L TL LDL++
Sbjct: 99 LESLRSLHLDSNRLPSLGEDTLRGLVNLQHLIVNNNQLGGIADEAFEDFLLTLEDLDLSY 158
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
N + + S+ + NL L L HN L + + L+ L L L N + + PD I
Sbjct: 159 NNLHGLPWDSVRRMVNLHQLSLDHNLLDHIAEGTFADLQKLARLDLTSNRLQKLPPDPIF 218
Query: 129 DNVTITTLT 137
+ LT
Sbjct: 219 ARSQASALT 227
Score = 124 (48.7 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 34/131 (25%), Positives = 63/131 (48%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
++ L L+++ N S ++ + L+ L SL N++ L + + R L L HL + +N
Sbjct: 75 MTGLVDLTLSRNTISHIQPFSFLDLESLRSLHLDSNRLPSLGEDTLRGLVNLQHLIVNNN 134
Query: 70 RIVAVSGASLAH-LSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
++ ++ + L L LDLS+N L L D + + +L +L LD N + +
Sbjct: 135 QLGGIADEAFEDFLLTLEDLDLSYNNLHGLPWDSVRRMVNLHQLSLDHNLLDHIAEGTFA 194
Query: 129 DNVTITTLTLS 139
D + L L+
Sbjct: 195 DLQKLARLDLT 205
>UNIPROTKB|F1MUR6 [details] [associations]
symbol:RTN4RL2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046658 "anchored to plasma membrane" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0004872 "receptor
activity" evidence=IEA] GO:GO:0009986 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0004872
InterPro:IPR000372 SMART:SM00013 GO:GO:0046658
GeneTree:ENSGT00690000101803 OMA:WFREARV EMBL:DAAA02041755
EMBL:DAAA02041756 IPI:IPI00691427 Ensembl:ENSBTAT00000016755
Uniprot:F1MUR6
Length = 417
Score = 141 (54.7 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 39/110 (35%), Positives = 57/110 (51%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
R L SL+ L + N ++ A L L+ L H N++ +L +H FR L +L L L
Sbjct: 149 RGLVSLQYLYLQENSLVHLQDDLFADLANLSHLFLHGNRLRLLTEHVFRGLGSLDRLLLH 208
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
NR+ V A+ L LT L L +N L +L + + L SL+ LRL+ N
Sbjct: 209 GNRLQGVHRAAFRGLGRLTILYLFNNSLASLPGEALADLPSLEFLRLNAN 258
Score = 133 (51.9 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 40/118 (33%), Positives = 58/118 (49%)
Query: 6 TVRRLSSLKVLSIAHNQ-FSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHL 64
T R L +L+ L + N+ S+ GL++L SL + Q+ L FR L +L +L
Sbjct: 98 TFRHLQALEELDLGDNRHLRSLEPDTFQGLERLQSLHLYRCQLSSLPGTIFRGLVSLQYL 157
Query: 65 DLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
L N +V + A L+NL+ L L N LR LT+ + L SL L L N + V
Sbjct: 158 YLQENSLVHLQDDLFADLANLSHLFLHGNRLRLLTEHVFRGLGSLDRLLLHGNRLQGV 215
>MGI|MGI:2669796 [details] [associations]
symbol:Rtn4rl2 "reticulon 4 receptor-like 2" species:10090
"Mus musculus" [GO:0004872 "receptor activity" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0009897 "external
side of plasma membrane" evidence=ISO] [GO:0009986 "cell surface"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0031103
"axon regeneration" evidence=TAS] [GO:0031225 "anchored to
membrane" evidence=IEA] [GO:0045121 "membrane raft" evidence=ISO]
[GO:0046658 "anchored to plasma membrane" evidence=ISO]
MGI:MGI:2669796 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0004872
InterPro:IPR000372 SMART:SM00013 GO:GO:0046658 GO:GO:0031103
GeneTree:ENSGT00690000101803 HOGENOM:HOG000116109
HOVERGEN:HBG063707 CTD:349667 KO:K16661 EMBL:AY250220 EMBL:BC132523
EMBL:BC138154 EMBL:AK142743 EMBL:BK001303 IPI:IPI00356283
RefSeq:NP_954693.1 UniGene:Mm.389289 UniGene:Mm.86447
ProteinModelPortal:Q7M6Z0 SMR:Q7M6Z0 PhosphoSite:Q7M6Z0
PRIDE:Q7M6Z0 Ensembl:ENSMUST00000054514 GeneID:269295
KEGG:mmu:269295 InParanoid:A2RTJ0 NextBio:392775 Bgee:Q7M6Z0
CleanEx:MM_RTN4RL2 Genevestigator:Q7M6Z0
GermOnline:ENSMUSG00000050896 Uniprot:Q7M6Z0
Length = 420
Score = 141 (54.7 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 39/110 (35%), Positives = 58/110 (52%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
R L SL+ L + N ++ A L L+ L H N++ +L +H FR L +L L L
Sbjct: 152 RGLVSLQYLYLQENSLLHLQDDLFADLANLSHLFLHGNRLRLLTEHVFRGLGSLDRLLLH 211
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
NR+ V A+ LS LT L L +N L +L + + L +L+ LRL+ N
Sbjct: 212 GNRLQGVHRAAFHGLSRLTILYLFNNSLASLPGEALADLPALEFLRLNAN 261
Score = 133 (51.9 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 39/118 (33%), Positives = 59/118 (50%)
Query: 6 TVRRLSSLKVLSIAHNQ-FSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHL 64
T R L +L+ L + N+ S+ GL++L SL + Q+ L + FR L +L +L
Sbjct: 101 TFRHLQALEELDLGDNRHLRSLEPDTFQGLERLQSLHLYRCQLSSLPGNIFRGLVSLQYL 160
Query: 65 DLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
L N ++ + A L+NL+ L L N LR LT+ + L SL L L N + V
Sbjct: 161 YLQENSLLHLQDDLFADLANLSHLFLHGNRLRLLTEHVFRGLGSLDRLLLHGNRLQGV 218
Score = 106 (42.4 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 38/130 (29%), Positives = 60/130 (46%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR- 70
S + L + +N S+R G G + LT L N + + +FR L L LDL NR
Sbjct: 61 STQRLFLQNNLIRSLRPGTF-GPNLLT-LWLFSNNLSTIHPGTFRHLQALEELDLGDNRH 118
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDN 130
+ ++ + L L +L L L +L ++ L SLQ L L +N + + D+ D
Sbjct: 119 LRSLEPDTFQGLERLQSLHLYRCQLSSLPGNIFRGLVSLQYLYLQENSLLHLQDDLFADL 178
Query: 131 VTITTLTLSG 140
++ L L G
Sbjct: 179 ANLSHLFLHG 188
>RGD|727797 [details] [associations]
symbol:Rtn4rl2 "reticulon 4 receptor-like 2" species:10116
"Rattus norvegicus" [GO:0004872 "receptor activity"
evidence=ISO;ISS] [GO:0007166 "cell surface receptor signaling
pathway" evidence=NAS] [GO:0009897 "external side of plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=ISO]
[GO:0045121 "membrane raft" evidence=IDA] [GO:0046658 "anchored to
plasma membrane" evidence=ISO;ISS] RGD:727797 GO:GO:0009897
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0004872 GO:GO:0045121 GO:GO:0007166
InterPro:IPR000372 SMART:SM00013 GO:GO:0046658
GeneTree:ENSGT00690000101803 HOGENOM:HOG000116109
HOVERGEN:HBG063707 OrthoDB:EOG4FXR7G CTD:349667 KO:K16661
OMA:WFREARV EMBL:AF532860 IPI:IPI00331880 RefSeq:NP_852045.1
UniGene:Rn.162683 ProteinModelPortal:Q80WD1 PRIDE:Q80WD1
Ensembl:ENSRNOT00000038250 GeneID:311169 KEGG:rno:311169
UCSC:RGD:727797 InParanoid:Q80WD1 NextBio:663102
Genevestigator:Q80WD1 GermOnline:ENSRNOG00000021513 Uniprot:Q80WD1
Length = 420
Score = 141 (54.7 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 39/110 (35%), Positives = 58/110 (52%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
R L SL+ L + N ++ A L L+ L H N++ +L +H FR L +L L L
Sbjct: 152 RGLVSLQYLYLQENSLLHLQDDLFADLANLSHLFLHGNRLRLLTEHVFRGLGSLDRLLLH 211
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
NR+ V A+ LS LT L L +N L +L + + L +L+ LRL+ N
Sbjct: 212 GNRLQGVHRAAFHGLSRLTILYLFNNSLASLPGEALADLPALEFLRLNAN 261
Score = 133 (51.9 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 39/118 (33%), Positives = 59/118 (50%)
Query: 6 TVRRLSSLKVLSIAHNQ-FSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHL 64
T R L +L+ L + N+ S+ GL++L SL + Q+ L + FR L +L +L
Sbjct: 101 TFRHLQALEELDLGDNRHLRSLEPDTFQGLERLQSLHLYRCQLSSLPGNIFRGLVSLQYL 160
Query: 65 DLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
L N ++ + A L+NL+ L L N LR LT+ + L SL L L N + V
Sbjct: 161 YLQENSLLHLQDDLFADLANLSHLFLHGNRLRLLTEHVFRGLGSLDRLLLHGNRLQGV 218
Score = 104 (41.7 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 38/130 (29%), Positives = 60/130 (46%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR- 70
S + L + +N S+R G G + LT L N + + +FR L L LDL NR
Sbjct: 61 STQRLFLQNNLIRSLRPGTF-GPNLLT-LWLFSNNLSTIYPGTFRHLQALEELDLGDNRH 118
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDN 130
+ ++ + L L +L L L +L ++ L SLQ L L +N + + D+ D
Sbjct: 119 LRSLEPDTFQGLERLQSLHLYRCQLSSLPGNIFRGLVSLQYLYLQENSLLHLQDDLFADL 178
Query: 131 VTITTLTLSG 140
++ L L G
Sbjct: 179 ANLSHLFLHG 188
>ZFIN|ZDB-GENE-080219-38 [details] [associations]
symbol:zgc:172282 "zgc:172282" species:7955 "Danio
rerio" [GO:0016020 "membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 ZFIN:ZDB-GENE-080219-38 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
HOVERGEN:HBG052352 EMBL:BC171440 IPI:IPI00882605 UniGene:Dr.85826
ProteinModelPortal:B7ZV32 Uniprot:B7ZV32
Length = 687
Score = 144 (55.7 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 34/121 (28%), Positives = 59/121 (48%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRA-LSTLSHL 64
T L L+ L + N+ S + GL L L +NQ+ + H+F L TL L
Sbjct: 94 TFADLKRLRALHLDSNRLSVITDDHFRGLTNLRHLILANNQLHNISPHAFDDFLGTLEDL 153
Query: 65 DLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTP 124
DL++N +V + ++ L+N+ TL++ HN + + + + L L L + N + + P
Sbjct: 154 DLSYNNLVDIPWDTIGRLTNVNTLNMDHNLIDHVPLGIFSNLHKLARLDMTSNKLKKIPP 213
Query: 125 D 125
D
Sbjct: 214 D 214
Score = 138 (53.6 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 38/114 (33%), Positives = 60/114 (52%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
++SL L+++ N S + A L +L +L N++ V+ D FR L+ L HL LA+N
Sbjct: 74 MTSLLHLTLSRNTISQIMPYTFADLKRLRALHLDSNRLSVITDDHFRGLTNLRHLILANN 133
Query: 70 RIVAVSGASLAH-LSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
++ +S + L L LDLS+N L + D I L ++ L +D N I V
Sbjct: 134 QLHNISPHAFDDFLGTLEDLDLSYNNLVDIPWDTIGRLTNVNTLNMDHNLIDHV 187
Score = 109 (43.4 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 33/124 (26%), Positives = 58/124 (46%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
L + N ++V+R A + L L+ N I + ++F L L L L NR+ ++
Sbjct: 56 LRLTENFITAVKRRDFANMTSLLHLTLSRNTISQIMPYTFADLKRLRALHLDSNRLSVIT 115
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITP-LKSLQELRLDDNDISMVTPDVIGDNVTIT 134
L+NL L L++N L ++ L +L++L L N++ + D IG +
Sbjct: 116 DDHFRGLTNLRHLILANNQLHNISPHAFDDFLGTLEDLDLSYNNLVDIPWDTIGRLTNVN 175
Query: 135 TLTL 138
TL +
Sbjct: 176 TLNM 179
Score = 107 (42.7 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 32/108 (29%), Positives = 51/108 (47%)
Query: 34 LDKLT-SLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSH 92
+D+ T L N I ++ F +++L HL L+ N I + + A L L L L
Sbjct: 49 IDRRTVELRLTENFITAVKRRDFANMTSLLHLTLSRNTISQIMPYTFADLKRLRALHLDS 108
Query: 93 NFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNV-TITTLTLS 139
N L +T D L +L+ L L +N + ++P D + T+ L LS
Sbjct: 109 NRLSVITDDHFRGLTNLRHLILANNQLHNISPHAFDDFLGTLEDLDLS 156
>RGD|1308146 [details] [associations]
symbol:Shoc2 "soc-2 (suppressor of clear) homolog (C. elegans)"
species:10116 "Rattus norvegicus" [GO:0000164 "protein phosphatase
type 1 complex" evidence=IEA;ISO;ISS] [GO:0005634 "nucleus"
evidence=IEA;ISO;ISS] [GO:0005737 "cytoplasm" evidence=ISO;ISS]
[GO:0019903 "protein phosphatase binding" evidence=IEA;ISO;ISS]
[GO:0046579 "positive regulation of Ras protein signal
transduction" evidence=IEA;ISO;ISS] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR027036 PROSITE:PS51450 RGD:1308146 GO:GO:0005634
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875
Pfam:PF12799 GO:GO:0046579 GO:GO:0019903 GO:GO:0000164 HSSP:P07359
HOGENOM:HOG000116557 CTD:8036 HOVERGEN:HBG055661 OrthoDB:EOG408N7W
PANTHER:PTHR23155:SF38 EMBL:BC079032 IPI:IPI00464721
RefSeq:NP_001013173.1 UniGene:Rn.156055 ProteinModelPortal:Q6AYI5
PRIDE:Q6AYI5 GeneID:309548 KEGG:rno:309548 UCSC:RGD:1308146
InParanoid:Q6AYI5 NextBio:660958 ArrayExpress:Q6AYI5
Genevestigator:Q6AYI5 Uniprot:Q6AYI5
Length = 582
Score = 143 (55.4 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 40/133 (30%), Positives = 71/133 (53%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
VR L L LSI N+ + + L L +L HNQ++ L + +++LDL
Sbjct: 211 VRNLPRLSTLSIRENKIKQLP-AEIGELCNLITLDVAHNQLEHLPKEIGNC-TQITNLDL 268
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDV 126
HN ++ + ++ +LS+L L L +N L A+ + L +L+EL L++N+IS + +
Sbjct: 269 QHNELLDLPD-TIGNLSSLNRLGLRYNRLSAIPRSL-AKCSALEELNLENNNISTLPESL 326
Query: 127 IGDNVTITTLTLS 139
+ V + +LTL+
Sbjct: 327 LSSLVKLNSLTLA 339
Score = 135 (52.6 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 41/129 (31%), Positives = 65/129 (50%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L++L + HN+ + + LD LT+L N+I +E R L LS L + N
Sbjct: 168 LKKLRMLDLRHNKLREIP-SVVYRLDSLTTLYLRFNRITAVEK-DVRNLPRLSTLSIREN 225
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+I + A + L NL TLD++HN L L ++ I + L L N++ + PD IG+
Sbjct: 226 KIKQLP-AEIGELCNLITLDVAHNQLEHLPKE-IGNCTQITNLDLQHNEL-LDLPDTIGN 282
Query: 130 NVTITTLTL 138
++ L L
Sbjct: 283 LSSLNRLGL 291
Score = 130 (50.8 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 38/111 (34%), Positives = 60/111 (54%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
V L SL+VL +++N + G L L KL L N+++ L + L L L L
Sbjct: 421 VSGLVSLEVLILSNNLLKKLPHG-LGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVL 478
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
+N++ + + HL+NLT L L N L L +++ T L++L+EL L+DN
Sbjct: 479 TNNQLTTLP-RGIGHLTNLTHLGLGENLLTHLPEEIGT-LENLEELYLNDN 527
Score = 129 (50.5 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 36/111 (32%), Positives = 59/111 (53%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
+ L +L L +AHNQ + + + ++T+L HN++ L D + LS+L+ L L
Sbjct: 234 IGELCNLITLDVAHNQLEHLPK-EIGNCTQITNLDLQHNELLDLPD-TIGNLSSLNRLGL 291
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
+NR+ A+ SLA S L L+L +N + L + L++ L L L L N
Sbjct: 292 RYNRLSAIP-RSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARN 341
Score = 127 (49.8 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 38/136 (27%), Positives = 68/136 (50%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T+ LSSL L + +N+ S++ R +LA L L+ +N I L + +L L+ L
Sbjct: 279 TIGNLSSLNRLGLRYNRLSAIPR-SLAKCSALEELNLENNNISTLPESLLSSLVKLNSLT 337
Query: 66 LAHN--RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVT 123
LA N ++ V G S S + +L++ HN + + + + K L +L + DN ++ +
Sbjct: 338 LARNCFQLYPVGGPS--QFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLP 395
Query: 124 PDVIGDNVTITTLTLS 139
D G ++ L L+
Sbjct: 396 LD-FGTWTSMVELNLA 410
Score = 120 (47.3 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 38/134 (28%), Positives = 66/134 (49%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
++ + S+L+ L++ +N S++ L+ L KL SL+ N + ST+ L+
Sbjct: 302 SLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 361
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
+ HNRI + + L+ L++ N L +L D T S+ EL L N ++ + D
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGT-WTSMVELNLATNQLTKIPED 420
Query: 126 VIGDNVTITTLTLS 139
V G V++ L LS
Sbjct: 421 VSG-LVSLEVLILS 433
Score = 110 (43.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 40/129 (31%), Positives = 65/129 (50%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L +L L+++ N +S+ +L L KL L HN++ + +R L +L+ L L N
Sbjct: 145 LVNLMTLALSENSLTSLP-DSLDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFN 202
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
RI AV + +L L+TL + N ++ L + I L +L L + N + + P IG+
Sbjct: 203 RITAVE-KDVRNLPRLSTLSIRENKIKQLPAE-IGELCNLITLDVAHNQLEHL-PKEIGN 259
Query: 130 NVTITTLTL 138
IT L L
Sbjct: 260 CTQITNLDL 268
>WB|WBGene00019351 [details] [associations]
symbol:lron-7 species:6239 "Caenorhabditis elegans"
[GO:0004623 "phospholipase A2 activity" evidence=IEA] [GO:0006644
"phospholipid metabolic process" evidence=IEA] [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 EMBL:FO081579 GeneID:180991 KEGG:cel:CELE_K03A1.2
CTD:180991 GeneTree:ENSGT00690000102720 PIR:T34319
RefSeq:NP_509227.2 ProteinModelPortal:Q21164 SMR:Q21164
STRING:Q21164 PRIDE:Q21164 EnsemblMetazoa:K03A1.2a.1
EnsemblMetazoa:K03A1.2a.2 UCSC:K03A1.2b.1 WormBase:K03A1.2a
HOGENOM:HOG000004765 InParanoid:Q21164 OMA:EIRDHAF NextBio:911890
ArrayExpress:Q21164 Uniprot:Q21164
Length = 586
Score = 143 (55.4 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 36/115 (31%), Positives = 58/115 (50%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRAL-STLSHLDLAHNRI 71
+ +L +++N+ + LT L HN + ++ F A +TL LDL +NRI
Sbjct: 206 VSILDVSYNEIRFIDNDVFKPFTNLTKLYLSHNVLQTVKKDVFDAAKNTLHRLDLGYNRI 265
Query: 72 VAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDV 126
VS S LS L L L N ++A +++ L SL+EL LD+ +I + D+
Sbjct: 266 KVVSDNSFDTLSKLKVLSLDGNPIKAWRKEMFKGLDSLEELSLDNCNIENLPADI 320
Score = 111 (44.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 37/116 (31%), Positives = 51/116 (43%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
LS LKVLS+ N + R+ GLD L LS + I+ L F L L L L N
Sbjct: 276 LSKLKVLSLDGNPIKAWRKEMFKGLDSLEELSLDNCNIENLPADIFEYLPKLVKLSLREN 335
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
+ + A +AHL +L +DLS L + L+E+ L+ V D
Sbjct: 336 PLEEIP-AVVAHLKSLKDIDLSVTNLTEIRDHAFAGDSDLEEIILEKMPFLTVVRD 390
Score = 110 (43.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 37/130 (28%), Positives = 61/130 (46%)
Query: 11 SSLKVLSIAHNQFSSVRRGAL-AGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
++L L ++HN +V++ A + L L +N+I V+ D+SF LS L L L N
Sbjct: 228 TNLTKLYLSHNVLQTVKKDVFDAAKNTLHRLDLGYNRIKVVSDNSFDTLSKLKVLSLDGN 287
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
I A L +L L L + + L D+ L L +L L +N + + P V+
Sbjct: 288 PIKAWRKEMFKGLDSLEELSLDNCNIENLPADIFEYLPKLVKLSLRENPLEEI-PAVVAH 346
Query: 130 NVTITTLTLS 139
++ + LS
Sbjct: 347 LKSLKDIDLS 356
>MGI|MGI:1315203 [details] [associations]
symbol:Slit1 "slit homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0005102 "receptor binding" evidence=TAS]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO;IDA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IMP;IDA]
[GO:0007411 "axon guidance" evidence=ISO;IGI;IDA] [GO:0008045
"motor neuron axon guidance" evidence=ISO] [GO:0021772 "olfactory
bulb development" evidence=IGI] [GO:0022028 "tangential migration
from the subventricular zone to the olfactory bulb" evidence=IMP]
[GO:0022029 "telencephalon cell migration" evidence=IGI]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0031290
"retinal ganglion cell axon guidance" evidence=IGI;IMP] [GO:0033563
"dorsal/ventral axon guidance" evidence=IGI] [GO:0040023
"establishment of nucleus localization" evidence=IDA] [GO:0043395
"heparan sulfate proteoglycan binding" evidence=ISO] [GO:0048495
"Roundabout binding" evidence=ISO;IPI] [GO:0048812 "neuron
projection morphogenesis" evidence=IGI] [GO:0048843 "negative
regulation of axon extension involved in axon guidance"
evidence=ISO] [GO:0048846 "axon extension involved in axon
guidance" evidence=ISO] [GO:0050919 "negative chemotaxis"
evidence=ISO;IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 MGI:MGI:1315203
GO:GO:0005737 GO:GO:0005615 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005102
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS50025
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0040023 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
Pfam:PF12661 GO:GO:0033563 GO:GO:0051964 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
GO:GO:0048843 CTD:6585 HOGENOM:HOG000116120 HOVERGEN:HBG057959
KO:K06838 OrthoDB:EOG4VDPXM EMBL:AF144627 EMBL:AK122376
EMBL:BC057131 EMBL:BC062091 IPI:IPI00330211 RefSeq:NP_056563.2
UniGene:Mm.40322 ProteinModelPortal:Q80TR4 SMR:Q80TR4 STRING:Q80TR4
PhosphoSite:Q80TR4 PRIDE:Q80TR4 Ensembl:ENSMUST00000025993
GeneID:20562 KEGG:mmu:20562 UCSC:uc008hmf.2 InParanoid:Q80TR4
OMA:KCVHGKC NextBio:298853 Bgee:Q80TR4 CleanEx:MM_SLIT1
Genevestigator:Q80TR4 GermOnline:ENSMUSG00000025020 Uniprot:Q80TR4
Length = 1531
Score = 148 (57.2 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 35/113 (30%), Positives = 59/113 (52%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L+VL + NQ +V RGA + +L L + NQ+ VL + F+ LS LDL+ N
Sbjct: 84 LKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRLDLSEN 143
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
+ AV + ++L L L N + + + L+ L+ L L++N+I+ +
Sbjct: 144 FLQAVPRKAFRGATDLKNLQLDKNRISCIEEGAFRALRGLEVLTLNNNNITTI 196
Score = 130 (50.8 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 32/124 (25%), Positives = 62/124 (50%)
Query: 16 LSIAHNQFSSVRR-GALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAV 74
L + +N+ S + G L L ++ +N++ +ED +F +++S L L N++ ++
Sbjct: 545 LRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGAASVSELHLTANQLESI 604
Query: 75 SGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTIT 134
L L TL L +N + + D T L++++ L L DN I+ ++P ++
Sbjct: 605 RSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALS 664
Query: 135 TLTL 138
TL L
Sbjct: 665 TLNL 668
Score = 124 (48.7 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 30/107 (28%), Positives = 52/107 (48%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
++LS LK +++++N+ S + G G ++ L NQ++ + FR L L L L
Sbjct: 562 KKLSHLKKINLSNNKVSEIEDGTFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLR 621
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRL 114
+NRI + S L N+ L L N + ++ L++L L L
Sbjct: 622 NNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNL 668
Score = 122 (48.0 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 32/107 (29%), Positives = 51/107 (47%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
L + N + + + AGL +L L NQI +E +F + L L L N++ +
Sbjct: 66 LELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLP 125
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
+ L+ LDLS NFL+A+ + L+ L+LD N IS +
Sbjct: 126 ELLFQNNQALSRLDLSENFLQAVPRKAFRGATDLKNLQLDKNRISCI 172
Score = 121 (47.7 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 35/110 (31%), Positives = 60/110 (54%)
Query: 33 GLDK-LTSLSCHHNQIDVLEDHSFRALSTLSHL---DLAHNRIVAVSGASLAHLSNLTTL 88
G+ K +T L NQ ++ LST +L DL++N+I ++S +S ++S LTTL
Sbjct: 758 GIPKNVTELYLDGNQFTLVPGQ----LSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTL 813
Query: 89 DLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTLTL 138
LS+N L+ + L+SL+ L L ND+S + + D +++ L +
Sbjct: 814 ILSYNALQCIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAI 863
Score = 120 (47.3 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 33/105 (31%), Positives = 53/105 (50%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
L+ + +++NQ + + A GL L SL + N+I L F L TL L L N+I
Sbjct: 335 LRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKIN 394
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
+ + L NL+ L L N +++L + T L+++Q L L N
Sbjct: 395 CIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQN 439
Score = 116 (45.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 29/88 (32%), Positives = 43/88 (48%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T +S+ L + NQ S+R G GLD L +L +N+I + + SF L + L
Sbjct: 584 TFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLS 643
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHN 93
L N I +S + L L+TL+L N
Sbjct: 644 LYDNHITTISPGAFDTLQALSTLNLLAN 671
Score = 108 (43.1 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 28/84 (33%), Positives = 41/84 (48%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
+L L ++ N +V R A G L +L N+I +E+ +FRAL L L L +N I
Sbjct: 134 ALSRLDLSENFLQAVPRKAFRGATDLKNLQLDKNRISCIEEGAFRALRGLEVLTLNNNNI 193
Query: 72 VAVSGASLAHLSNLTTLDLSHNFL 95
+ +S H+ L T L N L
Sbjct: 194 TTIPVSSFNHMPKLRTFRLHSNHL 217
Score = 97 (39.2 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 24/89 (26%), Positives = 48/89 (53%)
Query: 38 TSLSCHHNQIDVLEDHS-FRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLR 96
T L ++N+I +LE F+ LS L ++L++N++ + + ++++ L L+ N L
Sbjct: 543 TELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGAASVSELHLTANQLE 602
Query: 97 ALTQDLITPLKSLQELRLDDNDISMVTPD 125
++ + L L+ L L +N IS + D
Sbjct: 603 SIRSGMFRGLDGLRTLMLRNNRISCIHND 631
Score = 48 (22.0 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 10/40 (25%), Positives = 21/40 (52%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 47
R L L+VL++ +N +++ + + KL + H N +
Sbjct: 178 RALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHL 217
Score = 41 (19.5 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 8/16 (50%), Positives = 14/16 (87%)
Query: 107 KSLQELRLDDNDISMV 122
+S ELRL++N+IS++
Sbjct: 540 QSTTELRLNNNEISIL 555
>ZFIN|ZDB-GENE-070912-344 [details] [associations]
symbol:si:dkey-100n23.2 "si:dkey-100n23.2"
species:7955 "Danio rerio" [GO:0007165 "signal transduction"
evidence=IEA] InterPro:IPR000157 InterPro:IPR001611 Pfam:PF01582
PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
ZFIN:ZDB-GENE-070912-344 GO:GO:0016021 InterPro:IPR003591
SMART:SM00369 GO:GO:0045087 GO:GO:0005622 GO:GO:0004888
SUPFAM:SSF52200 GeneTree:ENSGT00680000099674 EMBL:BX936337
IPI:IPI00635635 Ensembl:ENSDART00000101409 Uniprot:F1Q8A7
Length = 737
Score = 144 (55.7 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 35/105 (33%), Positives = 53/105 (50%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
++L +L + +NQ ++ A GL+KL L N++ + H+F L L LDL N
Sbjct: 178 TNLIILELFNNQIYNIEDFAFVGLNKLEELYLSGNKLSYIHQHTFSGLHELMVLDLQGNH 237
Query: 71 IVAVSGASLAHLSNLTTLDLSH-NFLRALTQDLITPLKSLQELRL 114
I+ + S H N+TTL L NFL L ++ + LQ L L
Sbjct: 238 IIYIEPKSFGHFMNITTLLLGDLNFLSLLKPNVFEKIPQLQNLSL 282
>UNIPROTKB|E2RIV9 [details] [associations]
symbol:TLR3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0034123 "positive regulation of toll-like
receptor signaling pathway" evidence=IEA] [GO:0032760 "positive
regulation of tumor necrosis factor production" evidence=IEA]
[GO:0032757 "positive regulation of interleukin-8 production"
evidence=IEA] [GO:0032755 "positive regulation of interleukin-6
production" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0051607 "defense response to virus" evidence=IEA]
[GO:0050729 "positive regulation of inflammatory response"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0034138 "toll-like receptor 3 signaling pathway" evidence=IEA]
[GO:0004888 "transmembrane signaling receptor activity"
evidence=IEA] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0002756 "MyD88-independent toll-like receptor
signaling pathway" evidence=IEA] [GO:0032735 "positive regulation
of interleukin-12 production" evidence=IEA] [GO:0032728 "positive
regulation of interferon-beta production" evidence=IEA] [GO:0032722
"positive regulation of chemokine production" evidence=IEA]
[GO:0007252 "I-kappaB phosphorylation" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0071260 "cellular response to
mechanical stimulus" evidence=IEA] [GO:0051092 "positive regulation
of NF-kappaB transcription factor activity" evidence=IEA]
[GO:0046330 "positive regulation of JNK cascade" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045359 "positive
regulation of interferon-beta biosynthetic process" evidence=IEA]
[GO:0045356 "positive regulation of interferon-alpha biosynthetic
process" evidence=IEA] [GO:0045080 "positive regulation of
chemokine biosynthetic process" evidence=IEA] [GO:0045078 "positive
regulation of interferon-gamma biosynthetic process" evidence=IEA]
[GO:0043330 "response to exogenous dsRNA" evidence=IEA] [GO:0043123
"positive regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA] [GO:0042346 "positive regulation of NF-kappaB import
into nucleus" evidence=IEA] [GO:0034346 "positive regulation of
type III interferon production" evidence=IEA] Pfam:PF00560
InterPro:IPR000157 InterPro:IPR001611 InterPro:IPR027173
Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
GO:GO:0016021 GO:GO:0005737 GO:GO:0006952 GO:GO:0043123
GO:GO:0046330 GO:GO:0045944 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0032722 GO:GO:0032755
GO:GO:0009615 GO:GO:0051092 GO:GO:0032757 GO:GO:0071260
InterPro:IPR000372 SMART:SM00013 GO:GO:0032760 GO:GO:0043330
GO:GO:0032735 GO:GO:0042346 GO:GO:0045078 GO:GO:0032728
GO:GO:0007252 GO:GO:0045080 SUPFAM:SSF52200 GO:GO:0045359
GeneTree:ENSGT00680000099674 GO:GO:0034123 CTD:7098 KO:K05401
PANTHER:PTHR24365:SF5 OMA:IANINDD GO:GO:0045356 GO:GO:0034346
EMBL:AAEX03010493 RefSeq:XP_540020.2 ProteinModelPortal:E2RIV9
Ensembl:ENSCAFT00000011868 GeneID:482905 KEGG:cfa:482905
Uniprot:E2RIV9
Length = 905
Score = 145 (56.1 bits), Expect = 6.8e-09, P = 6.8e-09
Identities = 37/119 (31%), Positives = 62/119 (52%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
++L L++L++ HN+ S + LT L N I +++++ FR+L L LDL+
Sbjct: 97 QKLPLLEILNLQHNELSHLSDQTFVFCVNLTELHLMSNSIKIIQNNPFRSLKNLVKLDLS 156
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPL--KSLQELRLDDNDISMVTP 124
HN + + S L NL L LS+N + L ++ + L SL++L L N I +P
Sbjct: 157 HNGLSSTKLGSQLQLENLQELLLSNNKINVLRREELDFLGNSSLEKLELSSNPIKEFSP 215
Score = 136 (52.9 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 43/134 (32%), Positives = 61/134 (45%)
Query: 9 RLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 68
R S L +L N S + L L L+ HN++ L D +F L+ L L
Sbjct: 74 RYSQLTILDGGFNSISKLEPELCQKLPLLEILNLQHNELSHLSDQTFVFCVNLTELHLMS 133
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTP---D 125
N I + L NL LDLSHN L + L++LQEL L +N I+++ D
Sbjct: 134 NSIKIIQNNPFRSLKNLVKLDLSHNGLSSTKLGSQLQLENLQELLLSNNKINVLRREELD 193
Query: 126 VIGDNVTITTLTLS 139
+G N ++ L LS
Sbjct: 194 FLG-NSSLEKLELS 206
Score = 117 (46.2 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 38/127 (29%), Positives = 56/127 (44%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHS-----FRALSTLSHL 64
L +L +L +++N +++ L GL+KL L HN + L H+ L LSHL
Sbjct: 506 LRNLNILDLSNNNIANINDELLEGLEKLEILDMQHNNLARLWKHANPGGPVHFLKGLSHL 565
Query: 65 ---DLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISM 121
+L N + LS L ++DL N L L SL+ L L N I+
Sbjct: 566 HILNLESNGFDEIPAEVFKGLSELKSIDLGLNNLNIFPSSLFNDQVSLKSLNLQKNLITS 625
Query: 122 VTPDVIG 128
V +V G
Sbjct: 626 VEKNVFG 632
Score = 116 (45.9 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 32/110 (29%), Positives = 51/110 (46%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
+++ VL++ HNQ + +LT L N I LE + L L L+L HN
Sbjct: 52 ANITVLNLTHNQLRRLPPANFTRYSQLTILDGGFNSISKLEPELCQKLPLLEILNLQHNE 111
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
+ +S + NLT L L N ++ + + LK+L +L L N +S
Sbjct: 112 LSHLSDQTFVFCVNLTELHLMSNSIKIIQNNPFRSLKNLVKLDLSHNGLS 161
Score = 112 (44.5 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 39/140 (27%), Positives = 65/140 (46%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLD--KLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 68
+S++ LS+++ Q GL LT L HN ++V+E++SF L L + L +
Sbjct: 249 TSIQNLSLSNTQLHRTSNMTFLGLKHTNLTMLDLSHNNLNVIENNSFVWLPHLEYFLLEY 308
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITP---------LKSLQELRLDDNDI 119
N I + S L N+ LDL +F + T P LK LQ L ++DN
Sbjct: 309 NNIEHLFSHSFYGLLNVRYLDLKRSFAKQSTSLASHPRIDDFSFQWLKCLQYLNMEDNYF 368
Query: 120 SMVTPDVIGDNVTITTLTLS 139
+ + ++ + + L+LS
Sbjct: 369 AGIKSNMFTGLIKLKHLSLS 388
Score = 104 (41.7 bits), Expect = 0.00016, P = 0.00016
Identities = 31/120 (25%), Positives = 60/120 (50%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI-DVLEDHSFRALSTLSHLDLAHN 69
S L L++ N+ S + GA + L L L N+I L +R L + + L++N
Sbjct: 408 SPLITLNLTKNKISKIESGAFSWLGHLQVLDLGLNEIGQELTGQEWRGLENIVEIYLSYN 467
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRAL--TQDLITPLKSLQELRLDDNDISMVTPDVI 127
+ + ++ +S A + +L L L LR + + PL++L L L +N+I+ + +++
Sbjct: 468 KYLQLTSSSFALIPSLRRLMLRRTALRNVDSSPSPFHPLRNLNILDLSNNNIANINDELL 527
>UNIPROTKB|Q5VT99 [details] [associations]
symbol:LRRC38 "Leucine-rich repeat-containing protein 38"
species:9606 "Homo sapiens" [GO:0006811 "ion transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005216
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 EMBL:CH471167
HSSP:Q9BZR6 EMBL:AL603749 EMBL:AL354712 EMBL:BC016048
IPI:IPI00059708 RefSeq:NP_001010847.1 UniGene:Hs.657356
ProteinModelPortal:Q5VT99 SMR:Q5VT99 DMDM:74756785 PRIDE:Q5VT99
Ensembl:ENST00000376085 GeneID:126755 KEGG:hsa:126755
UCSC:uc001avb.3 CTD:126755 GeneCards:GC01M013801 HGNC:HGNC:27005
HPA:HPA038778 neXtProt:NX_Q5VT99 eggNOG:KOG0619
HOGENOM:HOG000113369 HOVERGEN:HBG094920 OMA:LDEIQCS
OrthoDB:EOG4GMTXN ChiTaRS:LRRC38 GenomeRNAi:126755 NextBio:81900
Bgee:Q5VT99 CleanEx:HS_LRRC38 Genevestigator:Q5VT99 Uniprot:Q5VT99
Length = 294
Score = 137 (53.3 bits), Expect = 7.3e-09, P = 7.3e-09
Identities = 35/105 (33%), Positives = 53/105 (50%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
L L +N S+ G +G KL L +N + L +FR+ L L LA+N +V
Sbjct: 82 LVYLDFRNNSLRSLEEGTFSGSAKLVFLDLSYNNLTQLGAGAFRSAGRLVKLSLANNNLV 141
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
V + L +L L+L+ N LR+L+ + L +L+ LRLD N
Sbjct: 142 GVHEDAFETLESLQVLELNDNNLRSLSVAALAALPALRSLRLDGN 186
Score = 118 (46.6 bits), Expect = 9.3e-07, P = 9.3e-07
Identities = 31/128 (24%), Positives = 59/128 (46%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
++ L +A N+ + L L +N + LE+ +F + L LDL++N +
Sbjct: 58 VRKLLVAGNRIQRIPEDFFIFYGDLVYLDFRNNSLRSLEEGTFSGSAKLVFLDLSYNNLT 117
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVT 132
+ + L L L++N L + +D L+SLQ L L+DN++ ++ +
Sbjct: 118 QLGAGAFRSAGRLVKLSLANNNLVGVHEDAFETLESLQVLELNDNNLRSLSVAALAALPA 177
Query: 133 ITTLTLSG 140
+ +L L G
Sbjct: 178 LRSLRLDG 185
>FB|FBgn0034476 [details] [associations]
symbol:Toll-7 "Toll-7" species:7227 "Drosophila melanogaster"
[GO:0005886 "plasma membrane" evidence=NAS] [GO:0004888
"transmembrane signaling receptor activity" evidence=ISS;NAS]
[GO:0006952 "defense response" evidence=NAS] [GO:0016021 "integral
to membrane" evidence=ISS] [GO:0007165 "signal transduction"
evidence=IEA;ISS] [GO:0002752 "cell surface pattern recognition
receptor signaling pathway" evidence=IC] [GO:0008329 "pattern
recognition receptor activity" evidence=IC] [GO:0051607 "defense
response to virus" evidence=IMP] [GO:0046790 "virion binding"
evidence=IDA] [GO:0009897 "external side of plasma membrane"
evidence=IDA] [GO:0010508 "positive regulation of autophagy"
evidence=IMP] Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450 EMBL:AE013599
GO:GO:0016021 GO:GO:0009897 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0010508 GO:GO:0051607
GO:GO:0005622 InterPro:IPR000372 SMART:SM00013 GO:GO:0008329
GO:GO:0046790 GO:GO:0002752 GeneTree:ENSGT00700000104442
SUPFAM:SSF52200 FlyBase:FBgn0034476 EMBL:AF247765
RefSeq:NP_523797.1 UniGene:Dm.2660 SMR:Q7KIN0
EnsemblMetazoa:FBtr0086336 GeneID:37272 KEGG:dme:Dmel_CG8595
UCSC:CG8595-RA CTD:37272 InParanoid:Q7KIN0 OMA:NHAFIGR
GenomeRNAi:37272 NextBio:802851 Uniprot:Q7KIN0
Length = 1446
Score = 147 (56.8 bits), Expect = 7.3e-09, P = 7.3e-09
Identities = 45/133 (33%), Positives = 68/133 (51%)
Query: 9 RLSSLKVLSIAHNQFSS--VRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
RL L V+ ++ NQ +S V AGL +L L+ HN + ++ +F+ L L L+L
Sbjct: 342 RLEQLLVVDLSGNQLTSNHVDNTTFAGLIRLIVLNLAHNALTRIDYRTFKELYFLQILNL 401
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDV 126
+N I + + L NL TL+L+ N L L L L L +L L++N IS+V P V
Sbjct: 402 RNNSIGHIEDNAFLPLYNLHTLNLAENRLHTLDDKLFNGLYVLSKLTLNNNLISVVEPAV 461
Query: 127 IGDNVTITTLTLS 139
+ + L LS
Sbjct: 462 FKNCSDLKELDLS 474
Score = 137 (53.3 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 37/121 (30%), Positives = 65/121 (53%)
Query: 10 LSSLKVLSIAHNQ--------FSSVRRGALAGL--DKLTSLSCHHNQI-DVLEDHSFRAL 58
+ +L+VL++ N+ F+ + GA +G +L L HN++ + E L
Sbjct: 212 VGNLQVLNLTRNRIRTAEQMGFADMNCGAGSGSAGSELQVLDASHNELRSISESWGISRL 271
Query: 59 STLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDND 118
L HL+LA+N + +SG +LA L++L ++LS+N L L + L K L+E+ L N+
Sbjct: 272 RRLQHLNLAYNNLSELSGEALAGLASLRIVNLSNNHLETLPEGLFAGSKELREIHLQQNE 331
Query: 119 I 119
+
Sbjct: 332 L 332
Score = 126 (49.4 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 37/114 (32%), Positives = 56/114 (49%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T + L L++L++ +N + A L L +L+ N++ L+D F L LS L
Sbjct: 389 TFKELYFLQILNLRNNSIGHIEDNAFLPLYNLHTLNLAENRLHTLDDKLFNGLYVLSKLT 448
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
L +N I V A + S+L LDLS N L + + L L L+ L L +N I
Sbjct: 449 LNNNLISVVEPAVFKNCSDLKELDLSSNQLNEVPRAL-QDLAMLRTLDLGENQI 501
Score = 126 (49.4 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 39/132 (29%), Positives = 66/132 (50%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
+ S LK L ++ NQ + V R AL L L +L NQI ++ SF+ L L+ L L
Sbjct: 463 KNCSDLKELDLSSNQLNEVPR-ALQDLAMLRTLDLGENQIRTFDNQSFKNLHQLTGLRLI 521
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI 127
N+I ++ L L+ L+L+ N ++++ + L+ +RLD N ++ + V
Sbjct: 522 DNQIGNITVGMFQDLPRLSVLNLAKNRIQSIERGSFDKNFELEAIRLDRNFLADIN-GVF 580
Query: 128 GDNVTITTLTLS 139
V++ L LS
Sbjct: 581 ATLVSLLWLNLS 592
Score = 125 (49.1 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 41/136 (30%), Positives = 64/136 (47%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T L L VL++AHN + + L L L+ +N I +ED++F L L L+
Sbjct: 365 TFAGLIRLIVLNLAHNALTRIDYRTFKELYFLQILNLRNNSIGHIEDNAFLPLYNLHTLN 424
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
LA NR+ + L L+ L L++N + + + L+EL L N ++ V P
Sbjct: 425 LAENRLHTLDDKLFNGLYVLSKLTLNNNLISVVEPAVFKNCSDLKELDLSSNQLNEV-PR 483
Query: 126 VIGDNVTITTLTLSGE 141
+ D + TL L GE
Sbjct: 484 ALQDLAMLRTLDL-GE 498
Score = 124 (48.7 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 35/132 (26%), Positives = 63/132 (47%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L+SL+++++++N ++ G AG +L + N++ L F L L +DL+ N
Sbjct: 295 LASLRIVNLSNNHLETLPEGLFAGSKELREIHLQQNELYELPKGLFHRLEQLLVVDLSGN 354
Query: 70 RIVA--VSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI 127
++ + V + A L L L+L+HN L + L LQ L L +N I + +
Sbjct: 355 QLTSNHVDNTTFAGLIRLIVLNLAHNALTRIDYRTFKELYFLQILNLRNNSIGHIEDNAF 414
Query: 128 GDNVTITTLTLS 139
+ TL L+
Sbjct: 415 LPLYNLHTLNLA 426
Score = 121 (47.7 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 29/103 (28%), Positives = 54/103 (52%)
Query: 15 VLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAV 74
V+ + N F ++ A G L +L + +Q+ +++ +F +L++L L LA N++ +
Sbjct: 833 VVYLDGNNFPVLKNHAFIGRKNLRALYVNGSQVAAIQNRTFASLASLQLLHLADNKLRTL 892
Query: 75 SGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
G LS L L L +N L + + PL +L+ +R+D N
Sbjct: 893 HGYEFEQLSALRELYLQNNQLTTIENATLAPLAALELIRIDGN 935
Score = 108 (43.1 bits), Expect = 0.00010, P = 0.00010
Identities = 35/110 (31%), Positives = 50/110 (45%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L+ L+ L + NQ + + L +LT L NQI + F+ L LS L+LA N
Sbjct: 488 LAMLRTLDLGENQIRTFDNQSFKNLHQLTGLRLIDNQIGNITVGMFQDLPRLSVLNLAKN 547
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
RI ++ S L + L NFL + T L SL L L +N +
Sbjct: 548 RIQSIERGSFDKNFELEAIRLDRNFLADINGVFAT-LVSLLWLNLSENHL 596
>UNIPROTKB|E2RGS8 [details] [associations]
symbol:LGR6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 Pfam:PF00001 PRINTS:PR00373 PROSITE:PS51450
GO:GO:0016021 InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0016500
GeneTree:ENSGT00650000092962 CTD:59352 KO:K08399 OMA:AYGKAPS
EMBL:AAEX03004986 EMBL:AAEX03004981 EMBL:AAEX03004982
EMBL:AAEX03004983 EMBL:AAEX03004984 EMBL:AAEX03004985
RefSeq:XP_848875.1 Ensembl:ENSCAFT00000016729 GeneID:490231
KEGG:cfa:490231 NextBio:20863298 Uniprot:E2RGS8
Length = 965
Score = 145 (56.1 bits), Expect = 7.3e-09, P = 7.3e-09
Identities = 37/110 (33%), Positives = 57/110 (51%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
+SL++L++ + G L +L L HNQI+ L S L + L HNR
Sbjct: 326 TSLEILTLTRAGIRLLPPGMCQQLPRLRVLELSHNQIEELP--SLHRCQKLEEIGLQHNR 383
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
I A+ + + LS+L LDLS N +R++ + L+SL +L L DN +S
Sbjct: 384 IGAIGADTFSQLSSLRALDLSWNAIRSIHPEAFVTLRSLVKLDLTDNQLS 433
Score = 134 (52.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 41/127 (32%), Positives = 66/127 (51%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
LSSL+ L + N + + AL L L +++ N+I + D++F+ L++L L L +N
Sbjct: 159 LSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNRISHIPDYAFQNLTSLVVLHLHNN 218
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
RI + S L NL TLDL++N L+ + T L LQEL +N+I +
Sbjct: 219 RIQHLGTHSFEGLHNLETLDLNYNELQEFPVAIRT-LGRLQELGFHNNNIKAIPEKAFMG 277
Query: 130 NVTITTL 136
N + T+
Sbjct: 278 NPLLQTI 284
Score = 133 (51.9 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 39/134 (29%), Positives = 61/134 (45%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
+ L +L+ +++A N+ S + A L L L H+N+I L HSF L L LDL
Sbjct: 180 LNNLPALQAMTLALNRISHIPDYAFQNLTSLVVLHLHNNRIQHLGTHSFEGLHNLETLDL 239
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDV 126
+N + A + L L L +N ++A+ + LQ + DN I V
Sbjct: 240 NYNELQEFPVA-IRTLGRLQELGFHNNNIKAIPEKAFMGNPLLQTIHFYDNPIQCVGRSA 298
Query: 127 IGDNVTITTLTLSG 140
D + TL+L+G
Sbjct: 299 FQDLPKLHTLSLNG 312
Score = 122 (48.0 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 37/110 (33%), Positives = 53/110 (48%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L SLK+L + +NQ V AL L L SL N I ++ + SF LS+L HL L N
Sbjct: 111 LYSLKILMLQNNQLGGVPADALWELPSLQSLRLDANLISLVPERSFEGLSSLRHLWLDDN 170
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
+ + +L +L L + L+ N + + L SL L L +N I
Sbjct: 171 ALTEIPVRALNNLPALQAMTLALNRISHIPDYAFQNLTSLVVLHLHNNRI 220
Score = 121 (47.7 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 35/110 (31%), Positives = 55/110 (50%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
++L L+VL ++HNQ + +L KL + HN+I + +F LS+L LDL+
Sbjct: 347 QQLPRLRVLELSHNQIEELP--SLHRCQKLEEIGLQHNRIGAIGADTFSQLSSLRALDLS 404
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
N I ++ + L +L LDL+ N L L + L L L+L N
Sbjct: 405 WNAIRSIHPEAFVTLRSLVKLDLTDNQLSTLP---LAGLGGLMHLKLRGN 451
Score = 108 (43.1 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 31/124 (25%), Positives = 58/124 (46%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
L ++ N + ++ G L L L N + + H+F L +L L L +N++ V
Sbjct: 69 LDLSMNNLTELQPGLFHHLRFLEELRLSGNHLSHIPGHAFSGLYSLKILMLQNNQLGGVP 128
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITT 135
+L L +L +L L N + + + L SL+ L LDDN ++ + + + +
Sbjct: 129 ADALWELPSLQSLRLDANLISLVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQA 188
Query: 136 LTLS 139
+TL+
Sbjct: 189 MTLA 192
>UNIPROTKB|Q5T0V0 [details] [associations]
symbol:SLIT1 "Slit homolog 1 protein" species:9606 "Homo
sapiens" [GO:0005509 "calcium ion binding" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 Pfam:PF02210
Pfam:PF12661 Pfam:PF01463 EMBL:AL442123 EMBL:AL512424
IPI:IPI00871419 UniGene:Hs.632082 HGNC:HGNC:11085
HOGENOM:HOG000116120 HOVERGEN:HBG057959 ChiTaRS:SLIT1 SMR:Q5T0V0
STRING:Q5T0V0 Ensembl:ENST00000371070 Uniprot:Q5T0V0
Length = 1461
Score = 147 (56.8 bits), Expect = 7.4e-09, P = 7.4e-09
Identities = 34/113 (30%), Positives = 59/113 (52%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L+VL + NQ +V RGA + +L L + NQ+ +L + F+ LS LDL+ N
Sbjct: 84 LKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRLDLSEN 143
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
I A+ + ++L L L N + + + L+ L+ L L++N+I+ +
Sbjct: 144 AIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTI 196
Score = 132 (51.5 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 33/124 (26%), Positives = 63/124 (50%)
Query: 16 LSIAHNQFSSVRR-GALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAV 74
L + +N+ S + G L L ++ +N++ +ED +F +++S L L N++ ++
Sbjct: 545 LRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESI 604
Query: 75 SGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTIT 134
L L TL L +N + + D T L++++ L L DN I+ V+P +++
Sbjct: 605 RSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQITTVSPGAFDTLQSLS 664
Query: 135 TLTL 138
TL L
Sbjct: 665 TLNL 668
Score = 125 (49.1 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 31/107 (28%), Positives = 53/107 (49%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
++L+ LK +++++N+ S + GA G ++ L NQ++ + FR L L L L
Sbjct: 562 KKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLR 621
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRL 114
+NRI + S L N+ L L N + ++ L+SL L L
Sbjct: 622 NNRISCIHNDSFTGLRNVRLLSLYDNQITTVSPGAFDTLQSLSTLNL 668
Score = 122 (48.0 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 36/110 (32%), Positives = 60/110 (54%)
Query: 33 GLDK-LTSLSCHHNQIDVLEDHSFRALSTLSHL---DLAHNRIVAVSGASLAHLSNLTTL 88
G+ K +T L NQ ++ LST +L DL++N+I ++S +S ++S LTTL
Sbjct: 758 GIPKNVTELYLDGNQFTLVPGQ----LSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTL 813
Query: 89 DLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTLTL 138
LS+N L+ + L+SL+ L L NDIS + + D +++ L +
Sbjct: 814 ILSYNALQCIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAI 863
Score = 120 (47.3 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 29/83 (34%), Positives = 44/83 (53%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
+S+ L + NQ S+R G GLD L +L +N+I + + SF L + L L N+
Sbjct: 589 ASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQ 648
Query: 71 IVAVSGASLAHLSNLTTLDLSHN 93
I VS + L +L+TL+L N
Sbjct: 649 ITTVSPGAFDTLQSLSTLNLLAN 671
Score = 120 (47.3 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 33/105 (31%), Positives = 53/105 (50%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
L+ + +++NQ + + A GL L SL + N+I L F L TL L L N+I
Sbjct: 335 LRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKIN 394
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
+ + L NL+ L L N +++L + T L+++Q L L N
Sbjct: 395 CIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQN 439
Score = 113 (44.8 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 28/84 (33%), Positives = 41/84 (48%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
+L L ++ N ++ R A G L +L NQI +E+ +FRAL L L L +N I
Sbjct: 134 ALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNI 193
Query: 72 VAVSGASLAHLSNLTTLDLSHNFL 95
+ +S H+ L T L N L
Sbjct: 194 TTIPVSSFNHMPKLRTFRLHSNHL 217
Score = 113 (44.8 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 30/107 (28%), Positives = 50/107 (46%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
L + N + + + AGL +L L NQI +E +F + L L L N++ +
Sbjct: 66 LELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLHMLP 125
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
+ L+ LDLS N ++A+ + L+ L+LD N IS +
Sbjct: 126 ELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCI 172
Score = 41 (19.5 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 8/16 (50%), Positives = 14/16 (87%)
Query: 107 KSLQELRLDDNDISMV 122
+S ELRL++N+IS++
Sbjct: 540 QSTAELRLNNNEISIL 555
>UNIPROTKB|Q92626 [details] [associations]
symbol:PXDN "Peroxidasin homolog" species:9606 "Homo
sapiens" [GO:0046872 "metal ion binding" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005152
"interleukin-1 receptor antagonist activity" evidence=NAS]
[GO:0006955 "immune response" evidence=NAS] [GO:0004601 "peroxidase
activity" evidence=IDA] [GO:0005201 "extracellular matrix
structural constituent" evidence=IDA] [GO:0031012 "extracellular
matrix" evidence=IDA] [GO:0030198 "extracellular matrix
organization" evidence=IDA] [GO:0042744 "hydrogen peroxide
catabolic process" evidence=IDA] [GO:0020037 "heme binding"
evidence=IDA] [GO:0055114 "oxidation-reduction process"
evidence=IDA] [GO:0005615 "extracellular space" evidence=IDA]
[GO:0005783 "endoplasmic reticulum" evidence=IDA] [GO:0001960
"negative regulation of cytokine-mediated signaling pathway"
evidence=NAS] InterPro:IPR001611 InterPro:IPR001007
InterPro:IPR002007 InterPro:IPR007110 InterPro:IPR010255
InterPro:IPR019791 Pfam:PF00093 Pfam:PF03098 PRINTS:PR00457
PROSITE:PS00436 PROSITE:PS01208 PROSITE:PS50184 PROSITE:PS50292
PROSITE:PS50835 PROSITE:PS51450 SMART:SM00214 GO:GO:0005783
GO:GO:0005615 EMBL:CH471053 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0006955 GO:GO:0046872 GO:GO:0005578 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0030198 GO:GO:0020037 GO:GO:0031012
GO:GO:0004601 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0042744 SUPFAM:SSF48113 PROSITE:PS00435
Orphanet:289499 GO:GO:0005201 Gene3D:1.10.640.10 GO:GO:0005152
CleanEx:HS_PRG2 HSSP:P05164 eggNOG:NOG262194 HOGENOM:HOG000016084
HOVERGEN:HBG108312 EMBL:AF200348 EMBL:EF090903 EMBL:D86983
EMBL:BC098579 IPI:IPI00016112 IPI:IPI00791587 RefSeq:NP_036425.1
UniGene:Hs.332197 ProteinModelPortal:Q92626 SMR:Q92626
IntAct:Q92626 STRING:Q92626 PeroxiBase:3355 PhosphoSite:Q92626
DMDM:172045828 PaxDb:Q92626 PRIDE:Q92626 DNASU:7837
Ensembl:ENST00000252804 GeneID:7837 KEGG:hsa:7837 UCSC:uc002qxa.3
UCSC:uc002qxb.1 CTD:7837 GeneCards:GC02M001635 HGNC:HGNC:14966
HPA:HPA012375 MIM:605158 neXtProt:NX_Q92626 PharmGKB:PA128394535
InParanoid:Q92626 OMA:EPVITWN OrthoDB:EOG4J1179 ChiTaRS:PXDN
GenomeRNAi:7837 NextBio:30238 ArrayExpress:Q92626 Bgee:Q92626
CleanEx:HS_PXDN Genevestigator:Q92626 Uniprot:Q92626
Length = 1479
Score = 147 (56.8 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 36/112 (32%), Positives = 57/112 (50%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
RRL +L L + +NQ + GA L+ L L + N+I ++ +F+ L++L L L
Sbjct: 83 RRLRNLNTLLLNNNQIKRIPSGAFEDLENLKYLYLYKNEIQSIDRQAFKGLASLEQLYLH 142
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
N+I + S HL L L L +N + L L+S++ LRLD N +
Sbjct: 143 FNQIETLDPDSFQHLPKLERLFLHNNRITHLVPGTFNHLESMKRLRLDSNTL 194
Score = 114 (45.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 31/110 (28%), Positives = 52/110 (47%)
Query: 15 VLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAV 74
+L + N+ ++ GA L L +L ++NQI + +F L L +L L N I ++
Sbjct: 66 ILDLRFNRIREIQPGAFRRLRNLNTLLLNNNQIKRIPSGAFEDLENLKYLYLYKNEIQSI 125
Query: 75 SGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTP 124
+ L++L L L N + L D L L+ L L +N I+ + P
Sbjct: 126 DRQAFKGLASLEQLYLHFNQIETLDPDSFQHLPKLERLFLHNNRITHLVP 175
>UNIPROTKB|O75093 [details] [associations]
symbol:SLIT1 "Slit homolog 1 protein" species:9606 "Homo
sapiens" [GO:0021510 "spinal cord development" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0040023 "establishment of nucleus localization" evidence=IEA]
[GO:0043395 "heparan sulfate proteoglycan binding" evidence=IEA]
[GO:0048843 "negative regulation of axon extension involved in axon
guidance" evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0005509 "calcium ion binding" evidence=NAS]
[GO:0005615 "extracellular space" evidence=NAS] [GO:0048853
"forebrain morphogenesis" evidence=NAS] [GO:0048846 "axon extension
involved in axon guidance" evidence=IDA] [GO:0050919 "negative
chemotaxis" evidence=IDA] [GO:0051964 "negative regulation of
synapse assembly" evidence=ISS] [GO:0048495 "Roundabout binding"
evidence=IPI] [GO:0021834 "chemorepulsion involved in embryonic
olfactory bulb interneuron precursor migration" evidence=IDA]
[GO:0007411 "axon guidance" evidence=IDA;TAS] [GO:0005737
"cytoplasm" evidence=IDA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005737
Reactome:REACT_111045 GO:GO:0005615 EMBL:CH471066 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS50025
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0040023 InterPro:IPR025875 Pfam:PF12799 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 GO:GO:0051964
GO:GO:0048853 Pfam:PF01463 EMBL:AL442123 GO:GO:0022028
GO:GO:0050919 GO:GO:0048843 EMBL:AB017167 EMBL:AB011537
EMBL:AL512424 EMBL:BC146851 EMBL:AY029183 IPI:IPI00296434
IPI:IPI00871419 RefSeq:NP_003052.2 UniGene:Hs.632082
ProteinModelPortal:O75093 SMR:O75093 IntAct:O75093
MINT:MINT-2797238 STRING:O75093 PhosphoSite:O75093 PaxDb:O75093
PRIDE:O75093 Ensembl:ENST00000266058 GeneID:6585 KEGG:hsa:6585
UCSC:uc001kmw.2 CTD:6585 GeneCards:GC10M098747 H-InvDB:HIX0079168
H-InvDB:HIX0170440 HGNC:HGNC:11085 HPA:HPA006879 MIM:603742
neXtProt:NX_O75093 PharmGKB:PA35938 HOGENOM:HOG000116120
HOVERGEN:HBG057959 InParanoid:O75093 KO:K06838 OrthoDB:EOG4VDPXM
PhylomeDB:O75093 ChiTaRS:SLIT1 GenomeRNAi:6585 NextBio:25625
ArrayExpress:O75093 Bgee:O75093 CleanEx:HS_SLIT1
Genevestigator:O75093 GermOnline:ENSG00000187122 Uniprot:O75093
Length = 1534
Score = 147 (56.8 bits), Expect = 7.8e-09, P = 7.8e-09
Identities = 34/113 (30%), Positives = 59/113 (52%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L+VL + NQ +V RGA + +L L + NQ+ +L + F+ LS LDL+ N
Sbjct: 84 LKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRLDLSEN 143
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
I A+ + ++L L L N + + + L+ L+ L L++N+I+ +
Sbjct: 144 AIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTI 196
Score = 132 (51.5 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 33/124 (26%), Positives = 63/124 (50%)
Query: 16 LSIAHNQFSSVRR-GALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAV 74
L + +N+ S + G L L ++ +N++ +ED +F +++S L L N++ ++
Sbjct: 545 LRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESI 604
Query: 75 SGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTIT 134
L L TL L +N + + D T L++++ L L DN I+ V+P +++
Sbjct: 605 RSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQITTVSPGAFDTLQSLS 664
Query: 135 TLTL 138
TL L
Sbjct: 665 TLNL 668
Score = 125 (49.1 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 31/107 (28%), Positives = 53/107 (49%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
++L+ LK +++++N+ S + GA G ++ L NQ++ + FR L L L L
Sbjct: 562 KKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLR 621
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRL 114
+NRI + S L N+ L L N + ++ L+SL L L
Sbjct: 622 NNRISCIHNDSFTGLRNVRLLSLYDNQITTVSPGAFDTLQSLSTLNL 668
Score = 122 (48.0 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 36/110 (32%), Positives = 60/110 (54%)
Query: 33 GLDK-LTSLSCHHNQIDVLEDHSFRALSTLSHL---DLAHNRIVAVSGASLAHLSNLTTL 88
G+ K +T L NQ ++ LST +L DL++N+I ++S +S ++S LTTL
Sbjct: 758 GIPKNVTELYLDGNQFTLVPGQ----LSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTL 813
Query: 89 DLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTLTL 138
LS+N L+ + L+SL+ L L NDIS + + D +++ L +
Sbjct: 814 ILSYNALQCIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAI 863
Score = 120 (47.3 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 29/83 (34%), Positives = 44/83 (53%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
+S+ L + NQ S+R G GLD L +L +N+I + + SF L + L L N+
Sbjct: 589 ASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQ 648
Query: 71 IVAVSGASLAHLSNLTTLDLSHN 93
I VS + L +L+TL+L N
Sbjct: 649 ITTVSPGAFDTLQSLSTLNLLAN 671
Score = 120 (47.3 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 33/105 (31%), Positives = 53/105 (50%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
L+ + +++NQ + + A GL L SL + N+I L F L TL L L N+I
Sbjct: 335 LRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKIN 394
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
+ + L NL+ L L N +++L + T L+++Q L L N
Sbjct: 395 CIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQN 439
Score = 113 (44.8 bits), Expect = 9.3e-07, Sum P(2) = 9.3e-07
Identities = 28/84 (33%), Positives = 41/84 (48%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
+L L ++ N ++ R A G L +L NQI +E+ +FRAL L L L +N I
Sbjct: 134 ALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNI 193
Query: 72 VAVSGASLAHLSNLTTLDLSHNFL 95
+ +S H+ L T L N L
Sbjct: 194 TTIPVSSFNHMPKLRTFRLHSNHL 217
Score = 113 (44.8 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 30/107 (28%), Positives = 50/107 (46%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
L + N + + + AGL +L L NQI +E +F + L L L N++ +
Sbjct: 66 LELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLHMLP 125
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
+ L+ LDLS N ++A+ + L+ L+LD N IS +
Sbjct: 126 ELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCI 172
Score = 41 (19.5 bits), Expect = 9.3e-07, Sum P(2) = 9.3e-07
Identities = 8/16 (50%), Positives = 14/16 (87%)
Query: 107 KSLQELRLDDNDISMV 122
+S ELRL++N+IS++
Sbjct: 540 QSTAELRLNNNEISIL 555
>ZFIN|ZDB-GENE-071126-1 [details] [associations]
symbol:lrrn1 "leucine rich repeat neuronal 1"
species:7955 "Danio rerio" [GO:0016020 "membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060
ZFIN:ZDB-GENE-071126-1 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 CTD:57633
GeneTree:ENSGT00690000102097 HOGENOM:HOG000252914
HOVERGEN:HBG052361 OMA:GINNMGE EMBL:CU468905 EMBL:BC155656
IPI:IPI00806642 RefSeq:NP_001124166.1 UniGene:Dr.29133
IntAct:A9JRH0 Ensembl:ENSDART00000084389 GeneID:568527
KEGG:dre:568527 NextBio:20889219 Uniprot:A9JRH0
Length = 717
Score = 143 (55.4 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 34/113 (30%), Positives = 61/113 (53%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
+ +L +L L ++ N FS++R L + +LT+L NQI + D S + L+ L L +
Sbjct: 92 LEQLLNLTELDLSQNNFSNIRDIGLTNMSQLTTLHLEENQIVEMPDFSLQDLTNLQELYI 151
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
HN+I +++ + A L NL L L+ N L+A+ +L+ L + +N +
Sbjct: 152 NHNQISSIAPNAFAGLRNLLRLHLNSNRLKAIDSRWFESTPNLEILMIGENPV 204
Score = 123 (48.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 33/117 (28%), Positives = 58/117 (49%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
+++ L++L+ L I HNQ SS+ A AGL L L + N++ ++ F + L L
Sbjct: 139 SLQDLTNLQELYINHNQISSIAPNAFAGLRNLLRLHLNSNRLKAIDSRWFESTPNLEILM 198
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
+ N +V + + L+NL +L L+ L + + L +L+ L DN + V
Sbjct: 199 IGENPVVGILDLNFKPLTNLRSLVLAGMELTDIPGNAFVGLDNLESLSFYDNKLVRV 255
Score = 106 (42.4 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 37/137 (27%), Positives = 62/137 (45%)
Query: 14 KVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVA 73
+VL + N + L L LT L N + D +S L+ L L N+IV
Sbjct: 76 QVLLLQSNYIARTSE-ELEQLLNLTELDLSQNNFSNIRDIGLTNMSQLTTLHLEENQIVE 134
Query: 74 VSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV-------TPDV 126
+ SL L+NL L ++HN + ++ + L++L L L+ N + + TP++
Sbjct: 135 MPDFSLQDLTNLQELYINHNQISSIAPNAFAGLRNLLRLHLNSNRLKAIDSRWFESTPNL 194
Query: 127 ----IGDNVTITTLTLS 139
IG+N + L L+
Sbjct: 195 EILMIGENPVVGILDLN 211
>UNIPROTKB|Q2KIF2 [details] [associations]
symbol:LRG1 "Leucine-rich alpha-2-glycoprotein 1"
species:9913 "Bos taurus" [GO:0050873 "brown fat cell
differentiation" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
GO:GO:0005615 CTD:116844 eggNOG:COG4886 HOGENOM:HOG000234378
HOVERGEN:HBG000045 OMA:RCAGPEA OrthoDB:EOG4TMR2P GO:GO:0050873
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GeneTree:ENSGT00690000102197 EMBL:DAAA02019605 EMBL:BC112660
IPI:IPI00702820 RefSeq:NP_001039642.1 UniGene:Bt.53757
Ensembl:ENSBTAT00000003618 GeneID:514663 KEGG:bta:514663
InParanoid:Q2KIF2 NextBio:20871452 Uniprot:Q2KIF2
Length = 346
Score = 138 (53.6 bits), Expect = 8.3e-09, P = 8.3e-09
Identities = 37/127 (29%), Positives = 63/127 (49%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
LKVL + N + + G L +L NQ+ LE L L HLDL+ N++
Sbjct: 117 LKVLDLTRNSLTGLFPGFFRVSAALCTLVLKGNQLKFLEASWLHGLKALRHLDLSENQLH 176
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVT 132
++ L + ++L TLDLS+N L+ L DL+ +L+ L L+ N + ++ ++
Sbjct: 177 SLPPGLLENFTDLLTLDLSNNQLQTLPPDLLRGPLNLERLHLEGNRLQVLGEGLLAPQPK 236
Query: 133 ITTLTLS 139
+ L L+
Sbjct: 237 LRYLFLN 243
Score = 105 (42.0 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 34/115 (29%), Positives = 54/115 (46%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
+ + L L +++NQ ++ L G L L N++ VL + L +L L
Sbjct: 183 LENFTDLLTLDLSNNQLQTLPPDLLRGPLNLERLHLEGNRLQVLGEGLLAPQPKLRYLFL 242
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPL-KSLQELRLDDNDIS 120
NR+ +V+ + L L LDLS+N L + L T L K+ + L+ D DIS
Sbjct: 243 NDNRLASVAAGAFRGLQKLDMLDLSNNLLTTVPTGLWTSLGKAARNLK-DGFDIS 296
Score = 102 (41.0 bits), Expect = 0.00014, P = 0.00014
Identities = 33/112 (29%), Positives = 51/112 (45%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
++L L + NQ + L GL L L NQ+ L + L LDL++N+
Sbjct: 139 AALCTLVLKGNQLKFLEASWLHGLKALRHLDLSENQLHSLPPGLLENFTDLLTLDLSNNQ 198
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
+ + L NL L L N L+ L + L+ P L+ L L+DN ++ V
Sbjct: 199 LQTLPPDLLRGPLNLERLHLEGNRLQVLGEGLLAPQPKLRYLFLNDNRLASV 250
Score = 100 (40.3 bits), Expect = 0.00059, P = 0.00059
Identities = 32/113 (28%), Positives = 49/113 (43%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L +L+ L ++ NQ S+ G L L +L +NQ+ L R L L L N
Sbjct: 162 LKALRHLDLSENQLHSLPPGLLENFTDLLTLDLSNNQLQTLPPDLLRGPLNLERLHLEGN 221
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
R+ + LA L L L+ N L ++ L+ L L L +N ++ V
Sbjct: 222 RLQVLGEGLLAPQPKLRYLFLNDNRLASVAAGAFRGLQKLDMLDLSNNLLTTV 274
Score = 100 (40.3 bits), Expect = 0.00059, P = 0.00059
Identities = 34/129 (26%), Positives = 56/129 (43%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
+L+ L ++ N+ L + +L L N + L FR + L L L N++
Sbjct: 92 NLQELHLSSNRLEDFSPKFLLPVPQLKVLDLTRNSLTGLFPGFFRVSAALCTLVLKGNQL 151
Query: 72 VAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNV 131
+ + L L L LDLS N L +L L+ L L L +N + + PD++ +
Sbjct: 152 KFLEASWLHGLKALRHLDLSENQLHSLPPGLLENFTDLLTLDLSNNQLQTLPPDLLRGPL 211
Query: 132 TITTLTLSG 140
+ L L G
Sbjct: 212 NLERLHLEG 220
>ZFIN|ZDB-GENE-091116-44 [details] [associations]
symbol:lrrc4bb "leucine rich repeat containing 4Bb"
species:7955 "Danio rerio" [GO:0051965 "positive regulation of
synapse assembly" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026883 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-091116-44 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GeneTree:ENSGT00690000101682
PANTHER:PTHR24369:SF7 EMBL:CU672238 EMBL:CU681836 IPI:IPI00961430
Ensembl:ENSDART00000007208 Uniprot:E7F2A9
Length = 745
Score = 143 (55.4 bits), Expect = 8.6e-09, P = 8.6e-09
Identities = 34/87 (39%), Positives = 48/87 (55%)
Query: 31 LAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDL 90
L L +L L NQ+ V+ SF+ L +L L L H+RI + + L NL L+L
Sbjct: 226 LTPLVRLEELELSGNQLGVVRPGSFQGLVSLRKLWLMHSRISVIERNAFDDLKNLEELNL 285
Query: 91 SHNFLRALTQDLITPLKSLQELRLDDN 117
SHN L +L DL TPL+ L+ + L+ N
Sbjct: 286 SHNSLHSLPHDLFTPLQQLERVHLNHN 312
Score = 118 (46.6 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 40/130 (30%), Positives = 62/130 (47%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L +L L + N+ V A L KL L +N I+ L ++F + +L LDL
Sbjct: 134 LPNLITLELFDNRLPLVPSQAFEYLSKLRELWLRNNPIETLPAYAFHRVPSLRRLDLGEL 193
Query: 70 RIVA-VSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
R ++ +S A+ L NL L+L L+ + +TPL L+EL L N + +V P
Sbjct: 194 RKLSFISEAAFEGLLNLRFLNLGMCGLKDVPN--LTPLVRLEELELSGNQLGVVRPGSFQ 251
Query: 129 DNVTITTLTL 138
V++ L L
Sbjct: 252 GLVSLRKLWL 261
Score = 114 (45.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 28/84 (33%), Positives = 44/84 (52%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L+ L ++ NQ VR G+ GL L L H++I V+E ++F L L L+L+HN
Sbjct: 229 LVRLEELELSGNQLGVVRPGSFQGLVSLRKLWLMHSRISVIERNAFDDLKNLEELNLSHN 288
Query: 70 RIVAVSGASLAHLSNLTTLDLSHN 93
+ ++ L L + L+HN
Sbjct: 289 SLHSLPHDLFTPLQQLERVHLNHN 312
Score = 107 (42.7 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 33/123 (26%), Positives = 58/123 (47%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T + L+ L++L ++ NQ + GA GL L +L N++ ++ +F LS L L
Sbjct: 106 TFKHLNHLEILQLSKNQIRQIEVGAFNGLPNLITLELFDNRLPLVPSQAFEYLSKLRELW 165
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSH-NFLRALTQDLITPLKSLQELRLDD---NDISM 121
L +N I + + + +L LDL L +++ L +L+ L L D+
Sbjct: 166 LRNNPIETLPAYAFHRVPSLRRLDLGELRKLSFISEAAFEGLLNLRFLNLGMCGLKDVPN 225
Query: 122 VTP 124
+TP
Sbjct: 226 LTP 228
>UNIPROTKB|F1Q057 [details] [associations]
symbol:PXDN "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0020037 "heme binding" evidence=IEA]
[GO:0006979 "response to oxidative stress" evidence=IEA]
[GO:0004601 "peroxidase activity" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR001007 InterPro:IPR002007
InterPro:IPR007110 InterPro:IPR010255 InterPro:IPR019791
Pfam:PF00093 Pfam:PF03098 PRINTS:PR00457 PROSITE:PS01208
PROSITE:PS50184 PROSITE:PS50292 PROSITE:PS50835 PROSITE:PS51450
SMART:SM00214 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0006979
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0020037
GO:GO:0004601 InterPro:IPR013098 Pfam:PF07679 SUPFAM:SSF48113
Gene3D:1.10.640.10 GeneTree:ENSGT00550000074325 OMA:EPVITWN
EMBL:AAEX03010629 EMBL:AAEX03010630 EMBL:AAEX03010631
EMBL:AAEX03010632 EMBL:AAEX03010633 EMBL:AAEX03010634
PeroxiBase:10035 Ensembl:ENSCAFT00000005177 Uniprot:F1Q057
Length = 1408
Score = 146 (56.5 bits), Expect = 9.0e-09, P = 9.0e-09
Identities = 35/110 (31%), Positives = 57/110 (51%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
R+L +L L + +NQ S+ G+ L+ L L + N+I ++ +F+ L++L L L
Sbjct: 16 RKLRNLNTLLLNNNQIKSIPGGSFEDLENLKYLYLYKNEIQAIDRQAFKGLASLEQLYLH 75
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
N+I + S HL L L L +N + L L+S++ LRLD N
Sbjct: 76 FNQIETLDPESFQHLPKLERLFLHNNRITHLVPGTFDHLESMKRLRLDSN 125
Score = 125 (49.1 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 31/86 (36%), Positives = 44/86 (51%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L +LK L + N+ ++ R A GL L L H NQI+ L+ SF+ L L L L +N
Sbjct: 42 LENLKYLYLYKNEIQAIDRQAFKGLASLEQLYLHFNQIETLDPESFQHLPKLERLFLHNN 101
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFL 95
RI + + HL ++ L L N L
Sbjct: 102 RITHLVPGTFDHLESMKRLRLDSNAL 127
Score = 109 (43.4 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 31/104 (29%), Positives = 49/104 (47%)
Query: 21 NQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLA 80
N+ ++ GA L L +L ++NQI + SF L L +L L N I A+ +
Sbjct: 5 NRIREIQPGAFRKLRNLNTLLLNNNQIKSIPGGSFEDLENLKYLYLYKNEIQAIDRQAFK 64
Query: 81 HLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTP 124
L++L L L N + L + L L+ L L +N I+ + P
Sbjct: 65 GLASLEQLYLHFNQIETLDPESFQHLPKLERLFLHNNRITHLVP 108
Score = 104 (41.7 bits), Expect = 0.00027, P = 0.00027
Identities = 27/81 (33%), Positives = 44/81 (54%)
Query: 45 NQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLIT 104
N+I ++ +FR L L+ L L +N+I ++ G S L NL L L N ++A+ +
Sbjct: 5 NRIREIQPGAFRKLRNLNTLLLNNNQIKSIPGGSFEDLENLKYLYLYKNEIQAIDRQAFK 64
Query: 105 PLKSLQELRLDDNDISMVTPD 125
L SL++L L N I + P+
Sbjct: 65 GLASLEQLYLHFNQIETLDPE 85
>MGI|MGI:1917780 [details] [associations]
symbol:Lrfn2 "leucine rich repeat and fibronectin type III
domain containing 2" species:10090 "Mus musculus" [GO:0005515
"protein binding" evidence=IPI] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060 MGI:MGI:1917780
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 GO:GO:0045211 SUPFAM:SSF49265 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 MEROPS:I43.001 EMBL:CH466559 HOGENOM:HOG000237343
HOVERGEN:HBG052352 GeneTree:ENSGT00660000095307 CTD:57497
eggNOG:NOG311542 KO:K16355 OMA:HWVAPDD OrthoDB:EOG469QT6
EMBL:AK017594 EMBL:AK044375 EMBL:AK122476 EMBL:BC139418
IPI:IPI00330152 RefSeq:NP_081728.2 UniGene:Mm.133607
ProteinModelPortal:Q80TG9 SMR:Q80TG9 IntAct:Q80TG9 STRING:Q80TG9
PhosphoSite:Q80TG9 PRIDE:Q80TG9 Ensembl:ENSMUST00000046254
GeneID:70530 KEGG:mmu:70530 UCSC:uc008cyd.2 InParanoid:Q80TG9
NextBio:331801 Bgee:Q80TG9 Genevestigator:Q80TG9
GermOnline:ENSMUSG00000040490 Uniprot:Q80TG9
Length = 788
Score = 143 (55.4 bits), Expect = 9.2e-09, P = 9.2e-09
Identities = 38/119 (31%), Positives = 58/119 (48%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRA-LSTLSHLDLAH 68
L SL+ L + N+ S+ L GL L L ++NQ+ + D +F L TL LDL++
Sbjct: 99 LESLRSLHLDSNRLPSLGEDTLRGLVNLQHLIVNNNQLGGIADDAFEDFLLTLEDLDLSY 158
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI 127
N + + S+ + NL L L HN L + + L+ L L L N + + PD I
Sbjct: 159 NNLHGLPWDSVRRMVNLHQLSLDHNLLDHIAEGTFADLQKLARLDLTSNRLQKLPPDPI 217
Score = 123 (48.4 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 34/131 (25%), Positives = 63/131 (48%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
++ L L+++ N S ++ + L+ L SL N++ L + + R L L HL + +N
Sbjct: 75 MTGLVDLTLSRNTISHIQPFSFLDLESLRSLHLDSNRLPSLGEDTLRGLVNLQHLIVNNN 134
Query: 70 RIVAVSGASLAH-LSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
++ ++ + L L LDLS+N L L D + + +L +L LD N + +
Sbjct: 135 QLGGIADDAFEDFLLTLEDLDLSYNNLHGLPWDSVRRMVNLHQLSLDHNLLDHIAEGTFA 194
Query: 129 DNVTITTLTLS 139
D + L L+
Sbjct: 195 DLQKLARLDLT 205
>RGD|1311831 [details] [associations]
symbol:Lrfn2 "leucine rich repeat and fibronectin type III
domain containing 2" species:10116 "Rattus norvegicus" [GO:0005515
"protein binding" evidence=IPI] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
PROSITE:PS51450 SMART:SM00060 RGD:1311831 GO:GO:0016021
GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030054
GO:GO:0045211 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
MEROPS:I43.001 HOGENOM:HOG000237343 HOVERGEN:HBG052352
eggNOG:NOG311542 OrthoDB:EOG469QT6 EMBL:DQ070869 IPI:IPI00371727
UniGene:Rn.47365 ProteinModelPortal:Q460M5 IntAct:Q460M5
STRING:Q460M5 UCSC:RGD:1311831 InParanoid:Q460M5
Genevestigator:Q460M5 Uniprot:Q460M5
Length = 788
Score = 143 (55.4 bits), Expect = 9.2e-09, P = 9.2e-09
Identities = 38/119 (31%), Positives = 58/119 (48%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRA-LSTLSHLDLAH 68
L SL+ L + N+ S+ L GL L L ++NQ+ + D +F L TL LDL++
Sbjct: 99 LESLRSLHLDSNRLPSLGEDTLRGLVNLQHLIVNNNQLGGIADDAFEDFLLTLEDLDLSY 158
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI 127
N + + S+ + NL L L HN L + + L+ L L L N + + PD I
Sbjct: 159 NNLHGLPWDSVRRMVNLHQLSLDHNLLDHIAEGTFADLQKLARLDLTSNRLQKLPPDPI 217
Score = 123 (48.4 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 34/131 (25%), Positives = 63/131 (48%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
++ L L+++ N S ++ + L+ L SL N++ L + + R L L HL + +N
Sbjct: 75 MTGLVDLTLSRNTISHIQPFSFLDLESLRSLHLDSNRLPSLGEDTLRGLVNLQHLIVNNN 134
Query: 70 RIVAVSGASLAH-LSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
++ ++ + L L LDLS+N L L D + + +L +L LD N + +
Sbjct: 135 QLGGIADDAFEDFLLTLEDLDLSYNNLHGLPWDSVRRMVNLHQLSLDHNLLDHIAEGTFA 194
Query: 129 DNVTITTLTLS 139
D + L L+
Sbjct: 195 DLQKLARLDLT 205
>MGI|MGI:1921761 [details] [associations]
symbol:Lrrc17 "leucine rich repeat containing 17"
species:10090 "Mus musculus" [GO:0001503 "ossification"
evidence=IEA] [GO:0001649 "osteoblast differentiation"
evidence=IDA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005615
"extracellular space" evidence=IDA] [GO:0033687 "osteoblast
proliferation" evidence=IDA] [GO:0045671 "negative regulation of
osteoclast differentiation" evidence=IDA] [GO:0048539 "bone marrow
development" evidence=IDA] InterPro:IPR001611 PROSITE:PS51450
MGI:MGI:1921761 GO:GO:0005615 InterPro:IPR000483 SMART:SM00082
GO:GO:0001503 GO:GO:0045671 GO:GO:0048539
GeneTree:ENSGT00700000104028 CTD:10234 eggNOG:NOG263968
HOGENOM:HOG000113365 HOVERGEN:HBG052344 OMA:PIQTLDC
OrthoDB:EOG4MCX08 EMBL:AK018071 EMBL:BC030317 IPI:IPI00110185
RefSeq:NP_083253.1 UniGene:Mm.439963 ProteinModelPortal:Q9CXD9
SMR:Q9CXD9 STRING:Q9CXD9 PRIDE:Q9CXD9 Ensembl:ENSMUST00000035651
GeneID:74511 KEGG:mmu:74511 UCSC:uc008wor.2 InParanoid:Q9CXD9
NextBio:340982 Bgee:Q9CXD9 CleanEx:MM_LRRC17 Genevestigator:Q9CXD9
GermOnline:ENSMUSG00000039883 Uniprot:Q9CXD9
Length = 443
Score = 114 (45.2 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 30/75 (40%), Positives = 42/75 (56%)
Query: 45 NQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQD--L 102
N+I VL+++ F L LDL N I + + L+ LTTL L HN ++ LT++ +
Sbjct: 93 NKIRVLKNNMFAKFKRLKSLDLQQNEISKIESEAFFGLNKLTTLLLQHNQIKVLTEEAFI 152
Query: 103 ITPLKSLQELRLDDN 117
TPL L LRL DN
Sbjct: 153 YTPL--LSYLRLYDN 165
Score = 103 (41.3 bits), Expect = 9.4e-09, Sum P(2) = 9.4e-09
Identities = 24/61 (39%), Positives = 33/61 (54%)
Query: 9 RLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 68
+ LK L + N+ S + A GL+KLT+L HNQI VL + +F LS+L L
Sbjct: 105 KFKRLKSLDLQQNEISKIESEAFFGLNKLTTLLLQHNQIKVLTEEAFIYTPLLSYLRLYD 164
Query: 69 N 69
N
Sbjct: 165 N 165
Score = 58 (25.5 bits), Expect = 9.4e-09, Sum P(2) = 9.4e-09
Identities = 16/56 (28%), Positives = 25/56 (44%)
Query: 84 NLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTLTLS 139
++ LDLS N +R L + L++L L N I + P + + L LS
Sbjct: 271 DIVKLDLSSNKIRQLRPKEFEDVHELKKLNLSSNGIEFIDPAAFLGLIHLEELDLS 326
Score = 56 (24.8 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 18/66 (27%), Positives = 29/66 (43%)
Query: 64 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVT 123
LDL+ N+I + + L L+LS N + + L L+EL L +N +
Sbjct: 275 LDLSSNKIRQLRPKEFEDVHELKKLNLSSNGIEFIDPAAFLGLIHLEELDLSNNSLQNFD 334
Query: 124 PDVIGD 129
V+ D
Sbjct: 335 YGVLED 340
>UNIPROTKB|Q7L0X0 [details] [associations]
symbol:TRIL "TLR4 interactor with leucine rich repeats"
species:9606 "Homo sapiens" [GO:0006954 "inflammatory response"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0002718 "regulation of cytokine production involved in immune
response" evidence=IDA] [GO:0001530 "lipopolysaccharide binding"
evidence=IDA] [GO:0046696 "lipopolysaccharide receptor complex"
evidence=IDA] [GO:0034142 "toll-like receptor 4 signaling pathway"
evidence=IDA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
EMBL:CH471073 GO:GO:0006954 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0045087 EMBL:CH236948
InterPro:IPR000372 SMART:SM00013 GO:GO:0034142 GO:GO:0046696
GO:GO:0001530 HSSP:Q9BZR6 EMBL:AC005013 Pfam:PF01463 EMBL:AB014544
EMBL:BC036337 IPI:IPI00006556 RefSeq:NP_055632.2 UniGene:Hs.21572
ProteinModelPortal:Q7L0X0 SMR:Q7L0X0 IntAct:Q7L0X0 DMDM:311033514
PRIDE:Q7L0X0 GeneID:9865 KEGG:hsa:9865 UCSC:uc003szt.3 CTD:9865
GeneCards:GC07M028992 HGNC:HGNC:22200 MIM:613356 neXtProt:NX_Q7L0X0
HOVERGEN:HBG066060 GenomeRNAi:9865 NextBio:37186
Genevestigator:Q7L0X0 GO:GO:0002718 Uniprot:Q7L0X0
Length = 811
Score = 143 (55.4 bits), Expect = 9.6e-09, P = 9.6e-09
Identities = 43/137 (31%), Positives = 64/137 (46%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T+ L L++L N+ S + RG+ GL+ L L N + L D F L L +L
Sbjct: 126 TLAPLRKLRILYANGNEISRLSRGSFEGLESLVKLRLDGNALGALPDAVFAPLGNLLYLH 185
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLIT--PLKSLQELRLDDNDISMVT 123
L NRI + + A L L L+LS N L+ + T PL+SL L L N++ +
Sbjct: 186 LESNRIRFLGKNAFAQLGKLRFLNLSANELQPSLRHAATFAPLRSLSSLILSANNLQHLG 245
Query: 124 PDVIGDNVTITTLTLSG 140
P + + L+L G
Sbjct: 246 PRIFQHLPRLGLLSLRG 262
Score = 132 (51.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 36/110 (32%), Positives = 53/110 (48%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
+ L L +LS+ NQ + + A GL+ L L N++ L L +L LDL+
Sbjct: 250 QHLPRLGLLSLRGNQLTHLAPEAFWGLEALRELRLEGNRLSQLPTALLEPLHSLEALDLS 309
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
N + A+ A+ HL L L L +N L AL+ D+ +L L LD N
Sbjct: 310 GNELSALHPATFGHLGRLRELSLRNNALSALSGDIFAASPALYRLDLDGN 359
Score = 130 (50.8 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 39/114 (34%), Positives = 56/114 (49%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T +LS L+ L + +N ++ G LA L KL L + N+I L SF L +L L
Sbjct: 102 TFEKLSRLEELYLGNNLLQALAPGTLAPLRKLRILYANGNEISRLSRGSFEGLESLVKLR 161
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
L N + A+ A A L NL L L N +R L ++ L L+ L L N++
Sbjct: 162 LDGNALGALPDAVFAPLGNLLYLHLESNRIRFLGKNAFAQLGKLRFLNLSANEL 215
Score = 126 (49.4 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 43/135 (31%), Positives = 60/135 (44%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T L SL L ++ N + L +L LS NQ+ L +F L L L
Sbjct: 224 TFAPLRSLSSLILSANNLQHLGPRIFQHLPRLGLLSLRGNQLTHLAPEAFWGLEALRELR 283
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
L NR+ + A L L +L LDLS N L AL L L+EL L +N +S ++ D
Sbjct: 284 LEGNRLSQLPTALLEPLHSLEALDLSGNELSALHPATFGHLGRLRELSLRNNALSALSGD 343
Query: 126 VIGDNVTITTLTLSG 140
+ + + L L G
Sbjct: 344 IFAASPALYRLDLDG 358
Score = 118 (46.6 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 39/133 (29%), Positives = 63/133 (47%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHS--FRALSTLSHLDLA 67
L +L L + N+ + + A A L KL L+ N++ H+ F L +LS L L+
Sbjct: 178 LGNLLYLHLESNRIRFLGKNAFAQLGKLRFLNLSANELQPSLRHAATFAPLRSLSSLILS 237
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI 127
N + + HL L L L N L L + L++L+ELRL+ N +S + ++
Sbjct: 238 ANNLQHLGPRIFQHLPRLGLLSLRGNQLTHLAPEAFWGLEALRELRLEGNRLSQLPTALL 297
Query: 128 GDNVTITTLTLSG 140
++ L LSG
Sbjct: 298 EPLHSLEALDLSG 310
Score = 113 (44.8 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 34/111 (30%), Positives = 55/111 (49%)
Query: 17 SIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSG 76
S+ N +++ L +L L +NQI L +F LS L L L +N + A++
Sbjct: 65 SLGGNFITNITAFDFHRLGQLRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQALAP 124
Query: 77 ASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI 127
+LA L L L + N + L++ L+SL +LRLD N + + PD +
Sbjct: 125 GTLAPLRKLRILYANGNEISRLSRGSFEGLESLVKLRLDGNALGAL-PDAV 174
Score = 104 (41.7 bits), Expect = 0.00014, P = 0.00014
Identities = 37/131 (28%), Positives = 53/131 (40%)
Query: 9 RLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 68
RL L+ L + +NQ S+ L +L L +N + L + L L L
Sbjct: 81 RLGQLRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQALAPGTLAPLRKLRILYANG 140
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
N I +S S L +L L L N L AL + PL +L L L+ N I + +
Sbjct: 141 NEISRLSRGSFEGLESLVKLRLDGNALGALPDAVFAPLGNLLYLHLESNRIRFLGKNAFA 200
Query: 129 DNVTITTLTLS 139
+ L LS
Sbjct: 201 QLGKLRFLNLS 211
Score = 103 (41.3 bits), Expect = 0.00018, P = 0.00018
Identities = 33/106 (31%), Positives = 50/106 (47%)
Query: 35 DKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNF 94
D LT S N I + F L L LDL +N+I ++ + LS L L L +N
Sbjct: 60 DVLT-YSLGGNFITNITAFDFHRLGQLRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNL 118
Query: 95 LRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTLTLSG 140
L+AL + PL+ L+ L + N+IS ++ ++ L L G
Sbjct: 119 LQALAPGTLAPLRKLRILYANGNEISRLSRGSFEGLESLVKLRLDG 164
>UNIPROTKB|E1C7Z9 [details] [associations]
symbol:E1C7Z9 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008045 "motor neuron
axon guidance" evidence=IEA] [GO:0022028 "tangential migration from
the subventricular zone to the olfactory bulb" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0040023 "establishment of nucleus localization" evidence=IEA]
[GO:0048495 "Roundabout binding" evidence=IEA] [GO:0048846 "axon
extension involved in axon guidance" evidence=IEA] [GO:0050919
"negative chemotaxis" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005737 GO:GO:0005615 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 InterPro:IPR025875
Pfam:PF12799 Pfam:PF01463 GeneTree:ENSGT00700000104083
GO:GO:0050919 EMBL:AADN02046435 EMBL:AADN02046436 EMBL:AADN02046437
EMBL:AADN02046438 EMBL:AADN02046439 EMBL:AADN02046440
EMBL:AADN02046441 EMBL:AADN02046442 IPI:IPI00823289
Ensembl:ENSGALT00000012327 Uniprot:E1C7Z9
Length = 819
Score = 143 (55.4 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 35/113 (30%), Positives = 57/113 (50%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L+VL + NQ S V RGA + +L L + NQ+ L + F+ LS LDL+ N
Sbjct: 91 LKQLRVLQLMENQISVVERGAFDDMKELERLRLNRNQLHTLPELLFQHNQALSRLDLSEN 150
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
I A+ + ++L L L N + + L+ L+ L L++N+I+ +
Sbjct: 151 FIQAIPRKAFRGATDLKNLQLDKNQISCIEDGAFRALRGLEVLTLNNNNITSI 203
Score = 131 (51.2 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 32/107 (29%), Positives = 52/107 (48%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
L + N + + + +GL +L L NQI V+E +F + L L L N++ +
Sbjct: 73 LELNGNNITRIHKNDFSGLKQLRVLQLMENQISVVERGAFDDMKELERLRLNRNQLHTLP 132
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
H L+ LDLS NF++A+ + L+ L+LD N IS +
Sbjct: 133 ELLFQHNQALSRLDLSENFIQAIPRKAFRGATDLKNLQLDKNQISCI 179
Score = 126 (49.4 bits), Expect = 9.9e-09, Sum P(2) = 9.9e-09
Identities = 36/111 (32%), Positives = 54/111 (48%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
+RR+ L +++NQ S + A GL L SL + N+I L F L L L L
Sbjct: 342 LRRILPLGFRDLSNNQISEIAPDAFQGLRSLNSLVLYGNKITDLPKGVFGGLFALQLLLL 401
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
N+I V + L NL+ L L N +++L + T L+++Q L L N
Sbjct: 402 NANKINCVRADAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQN 452
Score = 116 (45.9 bits), Expect = 8.7e-08, Sum P(2) = 8.7e-08
Identities = 29/84 (34%), Positives = 42/84 (50%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
+L L ++ N ++ R A G L +L NQI +ED +FRAL L L L +N I
Sbjct: 141 ALSRLDLSENFIQAIPRKAFRGATDLKNLQLDKNQISCIEDGAFRALRGLEVLTLNNNNI 200
Query: 72 VAVSGASLAHLSNLTTLDLSHNFL 95
++ +S H+ L T L N L
Sbjct: 201 TSIPVSSFNHMPKLRTFRLHSNHL 224
Score = 42 (19.8 bits), Expect = 8.7e-08, Sum P(2) = 8.7e-08
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 86 TTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
T + S+ L+AL + + P K++ EL LD N + V
Sbjct: 757 TVVRCSNKHLKALPRGI--P-KNVTELYLDGNQFTQV 790
Score = 41 (19.5 bits), Expect = 9.9e-09, Sum P(2) = 9.9e-09
Identities = 8/16 (50%), Positives = 14/16 (87%)
Query: 107 KSLQELRLDDNDISMV 122
+S ELRL++N+IS++
Sbjct: 553 QSTAELRLNNNEISIL 568
>MGI|MGI:2385129 [details] [associations]
symbol:Lrrc26 "leucine rich repeat containing 26"
species:10090 "Mus musculus" [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0008076 "voltage-gated potassium
channel complex" evidence=ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0015459 "potassium channel regulator activity"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 MGI:MGI:2385129 GO:GO:0005737 GO:GO:0005856
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0008076 GO:GO:0015459 GO:GO:0005216
InterPro:IPR000372 SMART:SM00013 EMBL:AL732309 HSSP:P07359
CTD:389816 HOGENOM:HOG000113367 HOVERGEN:HBG096585 OMA:DAAFSHC
OrthoDB:EOG4V438G EMBL:AK137758 EMBL:AK142669 EMBL:BC024531
EMBL:BC024539 EMBL:BC004853 IPI:IPI00127194 RefSeq:NP_666229.1
UniGene:Mm.275228 ProteinModelPortal:Q91W20 SMR:Q91W20
PhosphoSite:Q91W20 PRIDE:Q91W20 Ensembl:ENSMUST00000028337
GeneID:227618 KEGG:mmu:227618 UCSC:uc008irg.2
GeneTree:ENSGT00700000104083 InParanoid:Q91W20 NextBio:378666
Bgee:Q91W20 CleanEx:MM_LRRC26 Genevestigator:Q91W20 Uniprot:Q91W20
Length = 331
Score = 137 (53.3 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 36/128 (28%), Positives = 62/128 (48%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
++ L + HN+ S++ GA A L L N++ + +F L L LDL+ N++
Sbjct: 73 VRSLLLDHNRVSALPPGAFANAGALLYLDLRENRLRSVHARAFWGLGVLQWLDLSSNQLE 132
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVT 132
+ + A L L+ L L+ N L L ++ PL L+ L L DN +S + ++ +
Sbjct: 133 TLPPGTFAPLRALSFLSLAGNRLALLEPSILGPLPLLRVLSLQDNSLSAIEAGLLNNLPA 192
Query: 133 ITTLTLSG 140
+ L L G
Sbjct: 193 LDVLRLHG 200
Score = 127 (49.8 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 32/103 (31%), Positives = 51/103 (49%)
Query: 36 KLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFL 95
++ SL HN++ L +F L +LDL NR+ +V + L L LDLS N L
Sbjct: 72 QVRSLLLDHNRVSALPPGAFANAGALLYLDLRENRLRSVHARAFWGLGVLQWLDLSSNQL 131
Query: 96 RALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTLTL 138
L PL++L L L N ++++ P ++G + L+L
Sbjct: 132 ETLPPGTFAPLRALSFLSLAGNRLALLEPSILGPLPLLRVLSL 174
Score = 126 (49.4 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 37/106 (34%), Positives = 49/106 (46%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
+L L + N+ SV A GL L L NQ++ L +F L LS L LA NR+
Sbjct: 96 ALLYLDLRENRLRSVHARAFWGLGVLQWLDLSSNQLETLPPGTFAPLRALSFLSLAGNRL 155
Query: 72 VAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
+ + L L L L L N L A+ L+ L +L LRL N
Sbjct: 156 ALLEPSILGPLPLLRVLSLQDNSLSAIEAGLLNNLPALDVLRLHGN 201
>UNIPROTKB|F1S7K2 [details] [associations]
symbol:LRG1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050873 "brown fat cell differentiation" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005615 OMA:RCAGPEA
GO:GO:0050873 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GeneTree:ENSGT00690000102197 EMBL:CU972396
ProteinModelPortal:F1S7K2 Ensembl:ENSSSCT00000014761 Uniprot:F1S7K2
Length = 347
Score = 137 (53.3 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 37/111 (33%), Positives = 59/111 (53%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
LKVL + N + G L +L N++D+L+ R L L HLDL+ N++
Sbjct: 118 LKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLR 177
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLIT-PLKSLQELRLDDNDISMV 122
+ LA+ ++L LDL +N L+ L DL+ PLK L+ L L+ N + ++
Sbjct: 178 TLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLK-LEWLHLEGNRLQVL 227
Score = 117 (46.2 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 36/131 (27%), Positives = 60/131 (45%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
+ +L+ L +++NQ + L + +L L N + L F+ + L L L N
Sbjct: 91 IPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKEN 150
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
R+ + + L L L LDLS N LR L + L+ L L L +N + + PD++
Sbjct: 151 RLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRG 210
Query: 130 NVTITTLTLSG 140
+ + L L G
Sbjct: 211 PLKLEWLHLEG 221
Score = 101 (40.6 bits), Expect = 0.00037, P = 0.00037
Identities = 34/116 (29%), Positives = 51/116 (43%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
+R L +L+ L ++ NQ ++ R LA L L +NQ+ L R L L L
Sbjct: 160 LRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHL 219
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
NR+ + LA L L L++N L L L+ L L L +N ++ V
Sbjct: 220 EGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSV 275
>FB|FBgn0260793 [details] [associations]
symbol:2mit species:7227 "Drosophila melanogaster"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
EMBL:AE014297 InterPro:IPR003591 SMART:SM00369
GeneTree:ENSGT00690000101816 RefSeq:NP_650258.2 UniGene:Dm.29781
ProteinModelPortal:Q9VFY9 SMR:Q9VFY9 IntAct:Q9VFY9 MINT:MINT-879044
EnsemblMetazoa:FBtr0301436 GeneID:41616 KEGG:dme:Dmel_CG42573
UCSC:CG17319-RA CTD:41616 FlyBase:FBgn0260793 eggNOG:NOG150682
InParanoid:Q9VFY9 OMA:TRREAPY GenomeRNAi:41616 NextBio:824659
Bgee:Q9VFY9 Uniprot:Q9VFY9
Length = 1141
Score = 144 (55.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 41/133 (30%), Positives = 71/133 (53%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
+RL LK L++AHN+ ++ R + L +L +L HN I ++ +F AL L +LDL+
Sbjct: 190 QRLPQLKNLNLAHNELLNISRESFYNLLELQTLVLSHNNISDIDYETFLALPNLQYLDLS 249
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHN-FLRALTQDLITPLKSLQELRLDDNDISMVTPDV 126
HNR+ + +L + +L +L +++N + Q+ + SL+EL + V P
Sbjct: 250 HNRLSGSAIRALQGIPDLVSLSIAYNPDVGVAMQEFVASW-SLKELDASGTGLCQV-PAA 307
Query: 127 IGDNVTITTLTLS 139
+ +V TL LS
Sbjct: 308 LAQSVR--TLKLS 318
Score = 112 (44.5 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 31/92 (33%), Positives = 50/92 (54%)
Query: 37 LTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLR 96
L L HNQI L +F L L LDL++NR++ + SL L TL+L + +
Sbjct: 381 LEHLFLQHNQIMELPPQAFVGLVNLQTLDLSNNRLIFLPPLSLP---KLLTLNLESSGVE 437
Query: 97 ALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
+++Q ++ L L++L L+DN I D++G
Sbjct: 438 SVSQSIVHTLPQLRDLLLEDNPIKC--SDLLG 467
Score = 112 (44.5 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 41/124 (33%), Positives = 62/124 (50%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDV-LEDHSFRALSTLSHL 64
T L +L+ L ++HN+ S AL G+ L SLS +N DV + F A +L L
Sbjct: 236 TFLALPNLQYLDLSHNRLSGSAIRALQGIPDLVSLSIAYNP-DVGVAMQEFVASWSLKEL 294
Query: 65 DLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTP 124
D + + V A+LA ++ TL LS N+L+A+ + LQ L L + I+ V
Sbjct: 295 DASGTGLCQVP-AALAQ--SVRTLKLSDNWLKAINCGDMDSYPLLQYLDLSHSRIAQVED 351
Query: 125 DVIG 128
D +G
Sbjct: 352 DALG 355
Score = 104 (41.7 bits), Expect = 0.00021, P = 0.00021
Identities = 37/115 (32%), Positives = 57/115 (49%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
L+ L ++H++ + V AL L+ L SL N + + S S L HL L HN+I+
Sbjct: 336 LQYLDLSHSRIAQVEDDALGRLELLESLFLDRNLL--MRVPSSLPPS-LEHLFLQHNQIM 392
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI 127
+ + L NL TLDLS+N L L L P L L L+ + + V+ ++
Sbjct: 393 ELPPQAFVGLVNLQTLDLSNNRLIFLPP-LSLP--KLLTLNLESSGVESVSQSIV 444
>UNIPROTKB|F1SUL2 [details] [associations]
symbol:LRRC32 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050710 "negative regulation of cytokine secretion"
evidence=IEA] [GO:0046007 "negative regulation of activated T cell
proliferation" evidence=IEA] [GO:0010628 "positive regulation of
gene expression" evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
InterPro:IPR003591 SMART:SM00369 GO:GO:0010628 InterPro:IPR000372
SMART:SM00013 GO:GO:0046007 GO:GO:0050710
GeneTree:ENSGT00700000104185 CTD:2615 OMA:CCGNGWL EMBL:CU915508
RefSeq:XP_003129719.1 UniGene:Ssc.93908 Ensembl:ENSSSCT00000016222
GeneID:100522452 KEGG:ssc:100522452 Uniprot:F1SUL2
Length = 663
Score = 141 (54.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 38/112 (33%), Positives = 60/112 (53%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI- 71
++ L ++ NQ S+ L L L N+I L+ +F+AL L HL+LAHNR+
Sbjct: 52 IEALDLSGNQLRSIPASPLGFYVALRRLDLSANEISSLQPGAFQALPHLEHLNLAHNRLA 111
Query: 72 --VAVSGASLAHLSNLTTLDLSHNFLRA-LTQDLITPLKSLQELRLDDNDIS 120
+A+ L L +LT LDLS N L + L + L+ +L+ L L +N ++
Sbjct: 112 QGMALGAGGLGPLPHLTALDLSGNSLYSGLAEQLLGEAPALRTLSLAENSLT 163
Score = 123 (48.4 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 38/116 (32%), Positives = 56/116 (48%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
+L+ LS+A N + + R G L L H N + +ED +F AL L+HL+L+ N +
Sbjct: 151 ALRTLSLAENSLTRLARHTFRGAPALEWLDLHSNVLMDIEDGAFEALPRLAHLNLSRNSL 210
Query: 72 VAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLK-SLQELRLDDNDISMVTPDV 126
+S L L LDLS N + A P + L L L +N + + PDV
Sbjct: 211 TCISDF---RLQQLRVLDLSCNSIEAFQTAPEPPAEYQLAWLDLRENRL-LHFPDV 262
Score = 105 (42.0 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 37/112 (33%), Positives = 49/112 (43%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
LS L L +++N+ V G L L L L+ N + +L L LD++HN
Sbjct: 315 LSQLLNLDLSYNEIELVPEGFLEHLTSLRFLNLSRNCLQAFRAWGAGSLPCLMRLDISHN 374
Query: 70 RIVAVS-GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
+ + GA L +L TL L N L L L SLQ L L N IS
Sbjct: 375 ALEKLELGAGA--LGSLRTLLLQDNALWDLPPYAFASLASLQRLNLQGNRIS 424
Score = 102 (41.0 bits), Expect = 0.00036, P = 0.00036
Identities = 32/114 (28%), Positives = 52/114 (45%)
Query: 27 RRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLT 86
R + L +L +L +N+I+++ + L++L L+L+ N + A L L
Sbjct: 308 RNASTPPLSQLLNLDLSYNEIELVPEGFLEHLTSLRFLNLSRNCLQAFRAWGAGSLPCLM 367
Query: 87 TLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTLTLSG 140
LD+SHN L L L SL+ L L DN + + P ++ L L G
Sbjct: 368 RLDISHNALEKLELGA-GALGSLRTLLLQDNALWDLPPYAFASLASLQRLNLQG 420
>ZFIN|ZDB-GENE-040724-113 [details] [associations]
symbol:si:ch211-191d15.2 "si:ch211-191d15.2"
species:7955 "Danio rerio" [GO:0016226 "iron-sulfur cluster
assembly" evidence=IEA] [GO:0005506 "iron ion binding"
evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-040724-113 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 SMART:SM00013 EMBL:AL845326
GeneTree:ENSGT00690000102271 IPI:IPI00504200
ProteinModelPortal:F1QT78 Ensembl:ENSDART00000140801 Uniprot:F1QT78
Length = 221
Score = 131 (51.2 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 42/110 (38%), Positives = 55/110 (50%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
S L+ LS++HNQ RG A L+ +L NQI + S R L L+ LDL NR
Sbjct: 58 SGLQELSLSHNQLVRFPRGLPASLE---TLQLQENQITYITTGSLRQLGNLTRLDLEDNR 114
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
I +V +L L+ L L L N L L +L P SL L + +N IS
Sbjct: 115 IRSVQPGALLSLTRLRMLTLKGNRLSRLPANL--P-SSLTHLDVSENCIS 161
Score = 119 (46.9 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 35/112 (31%), Positives = 60/112 (53%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
++R+L +L L + N+ SV+ GAL L +L L+ N++ L + S+L+HLD
Sbjct: 98 SLRQLGNLTRLDLEDNRIRSVQPGALLSLTRLRMLTLKGNRLSRLPAN---LPSSLTHLD 154
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
++ N I A+ +SL L NL L ++ N L + + L L+ + L +N
Sbjct: 155 VSENCISALDLSSLFMLVNLQVLRINSNCLHTIPERAFDGLSHLRSVDLANN 206
Score = 98 (39.6 bits), Expect = 0.00064, P = 0.00064
Identities = 29/89 (32%), Positives = 42/89 (47%)
Query: 52 DHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQE 111
D+ F+ S L L L+HN++V A +L TL L N + +T + L +L
Sbjct: 51 DNMFQPYSGLQELSLSHNQLVRFPRGLPA---SLETLQLQENQITYITTGSLRQLGNLTR 107
Query: 112 LRLDDNDISMVTPDVIGDNVTITTLTLSG 140
L L+DN I V P + + LTL G
Sbjct: 108 LDLEDNRIRSVQPGALLSLTRLRMLTLKG 136
>MGI|MGI:2442845 [details] [associations]
symbol:Lrrc38 "leucine rich repeat containing 38"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
MGI:MGI:2442845 GO:GO:0016021 GO:GO:0005886 eggNOG:COG4886
InterPro:IPR000483 SMART:SM00082 GO:GO:0005216 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 CTD:126755 HOGENOM:HOG000113369
HOVERGEN:HBG094920 OMA:LDEIQCS OrthoDB:EOG4GMTXN EMBL:AL611982
EMBL:BC129963 EMBL:AK045936 EMBL:AK160116 IPI:IPI00938501
RefSeq:NP_001156455.1 UniGene:Mm.94020 ProteinModelPortal:A2VDH3
SMR:A2VDH3 PRIDE:A2VDH3 Ensembl:ENSMUST00000052458 GeneID:242735
KEGG:mmu:242735 UCSC:uc008vqb.2 GeneTree:ENSGT00700000104451
InParanoid:A2VDH3 NextBio:385532 Bgee:A2VDH3 CleanEx:MM_LRRC38
Genevestigator:A2VDH3 Uniprot:A2VDH3
Length = 298
Score = 135 (52.6 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 34/105 (32%), Positives = 52/105 (49%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
L L +N S+ G +G KL L +N + L +FR+ L L LA+N +
Sbjct: 86 LVYLDFRNNSLRSLEEGTFSGSGKLAFLDLSYNNLTQLGAGAFRSAGRLVKLSLANNHLA 145
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
V A+ L +L L+L+ N LR+L + L +L+ +RLD N
Sbjct: 146 GVHEAAFESLESLQVLELNDNNLRSLNVAALDALPALRTVRLDGN 190
Score = 114 (45.2 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 30/128 (23%), Positives = 57/128 (44%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
++ L +A N+ + L L +N + LE+ +F L+ LDL++N +
Sbjct: 62 VRKLLVAGNRIQQIPEDFFIFHGDLVYLDFRNNSLRSLEEGTFSGSGKLAFLDLSYNNLT 121
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVT 132
+ + L L L++N L + + L+SLQ L L+DN++ + +
Sbjct: 122 QLGAGAFRSAGRLVKLSLANNHLAGVHEAAFESLESLQVLELNDNNLRSLNVAALDALPA 181
Query: 133 ITTLTLSG 140
+ T+ L G
Sbjct: 182 LRTVRLDG 189
>UNIPROTKB|D8MCT0 [details] [associations]
symbol:LGR5 "Leucine-rich repeat-containing G
protein-coupled receptor 5" species:9606 "Homo sapiens" [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0016500 EMBL:AC078860 EMBL:AC090116 HGNC:HGNC:4504
EMBL:FN820440 IPI:IPI00970955 SMR:D8MCT0 Ensembl:ENST00000536515
UCSC:uc021rar.1 Uniprot:D8MCT0
Length = 835
Score = 142 (55.0 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 45/131 (34%), Positives = 60/131 (45%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L SLKVL + +NQ V AL L L SL H+N+I L F L +L LDL +N
Sbjct: 113 LYSLKVLMLQNNQLRHVPTEALQNLRSLQSLHLHNNRIHSLGKKCFDGLHSLETLDLNYN 172
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+ A + LSNL L N +R++ + SL + DN I V
Sbjct: 173 NLDEFPTA-IRTLSNLKELGFHSNNIRSIPEKAFVGNPSLITIHFYDNPIQFVGRSAFQH 231
Query: 130 NVTITTLTLSG 140
+ TLTL+G
Sbjct: 232 LPELRTLTLNG 242
Score = 123 (48.4 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 37/127 (29%), Positives = 62/127 (48%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L+ L +A N + + +GA GL L L +NQ+ + + + L +L L L +N
Sbjct: 89 LRFLEELRLAGNALTYIPKGAFTGLYSLKVLMLQNNQLRHVPTEALQNLRSLQSLHLHNN 148
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
RI ++ L +L TLDL++N L + T L +L+EL N+I +
Sbjct: 149 RIHSLGKKCFDGLHSLETLDLNYNNLDEFPTAIRT-LSNLKELGFHSNNIRSIPEKAFVG 207
Query: 130 NVTITTL 136
N ++ T+
Sbjct: 208 NPSLITI 214
Score = 114 (45.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 33/109 (30%), Positives = 57/109 (52%)
Query: 9 RLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 68
+L +L+VL +++N + ++ KL + HN+I ++ +F+ L +L L+LA
Sbjct: 278 QLPNLQVLDLSYNLLEDLPSFSVC--QKLQKIDLRHNEIYEIKVDTFQQLLSLRSLNLAW 335
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
N+I + + + L +L LDLS N L + IT L L L+L N
Sbjct: 336 NKIAIIHPNAFSTLPSLIKLDLSSNLLSSFP---ITGLHGLTHLKLTGN 381
>UNIPROTKB|P0C6S8 [details] [associations]
symbol:LINGO3 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 3" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
eggNOG:NOG278536 HOGENOM:HOG000246971 HOVERGEN:HBG057546
EMBL:AC004152 IPI:IPI00376131 RefSeq:NP_001094861.1
UniGene:Hs.371587 ProteinModelPortal:P0C6S8 SMR:P0C6S8
PhosphoSite:P0C6S8 DMDM:182662399 PRIDE:P0C6S8
Ensembl:ENST00000404279 GeneID:645191 KEGG:hsa:645191
UCSC:uc010dsx.1 CTD:645191 GeneCards:GC19M002289 H-InvDB:HIX0202769
HGNC:HGNC:21206 MIM:609792 neXtProt:NX_P0C6S8 PharmGKB:PA162394097
InParanoid:P0C6S8 OMA:EIDNWPL OrthoDB:EOG4THVSV GenomeRNAi:645191
NextBio:117179 Bgee:P0C6S8 CleanEx:HS_LINGO3 Genevestigator:P0C6S8
Uniprot:P0C6S8
Length = 592
Score = 140 (54.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 44/145 (30%), Positives = 66/145 (45%)
Query: 2 SIWCTVRRLSSL--------KVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDH 53
++ CT RRL+++ ++L ++ N+ + G LA L L L N I +E
Sbjct: 37 AVACTRRRLTAVPDGIPAETRLLELSRNRIRCLNPGDLAALPALEELDLSENAIAHVEPG 96
Query: 54 SFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELR 113
+F L L L L N++ + L NLT LDLS N L L L SL+ L
Sbjct: 97 AFANLPRLRVLRLRGNQLKLIPPGVFTRLDNLTLLDLSENKLVILLDYTFQDLHSLRRLE 156
Query: 114 LDDNDISMVTPDVIGDNVTITTLTL 138
+ DND+ V+ + + LTL
Sbjct: 157 VGDNDLVFVSRRAFAGLLALEELTL 181
Score = 133 (51.9 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 37/105 (35%), Positives = 55/105 (52%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L+VL + NQ + G LD LT L N++ +L D++F+ L +L L++ N
Sbjct: 101 LPRLRVLRLRGNQLKLIPPGVFTRLDNLTLLDLSENKLVILLDYTFQDLHSLRRLEVGDN 160
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRL 114
+V VS + A L L L L L AL+ + + L+SL LRL
Sbjct: 161 DLVFVSRRAFAGLLALEELTLERCNLTALSGESLGHLRSLGALRL 205
Score = 128 (50.1 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 34/109 (31%), Positives = 52/109 (47%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
+L LS+ H ++V AL LT L+ HN I + SFR L L L LA +
Sbjct: 247 NLTSLSVTHTNITAVPAAALRHQAHLTCLNLSHNPISTVPRGSFRDLVRLRELHLAGALL 306
Query: 72 VAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
V + L + L+LS+N L L + + +L+ LR+D N ++
Sbjct: 307 AVVEPQAFLGLRQIRLLNLSNNLLSTLEESTFHSVNTLETLRVDGNPLA 355
Score = 113 (44.8 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 40/132 (30%), Positives = 64/132 (48%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L +L+ L++ +++ +L L L +L H I LED +FR L L HL++ +
Sbjct: 173 LLALEELTLERCNLTALSGESLGHLRSLGALRLRHLAIASLEDQNFRRLPGLLHLEIDNW 232
Query: 70 RIVA-VSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
++ V+ SL L NLT+L ++H + A+ + L L L N IS V
Sbjct: 233 PLLEEVAAGSLRGL-NLTSLSVTHTNITAVPAAALRHQAHLTCLNLSHNPISTVPRGSFR 291
Query: 129 DNVTITTLTLSG 140
D V + L L+G
Sbjct: 292 DLVRLRELHLAG 303
Score = 108 (43.1 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 39/131 (29%), Positives = 60/131 (45%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHH-NQIDVLEDHSFRALSTLSHLDLAH 68
L SL L + H +S+ L L L + ++ + S R L+ L+ L + H
Sbjct: 197 LRSLGALRLRHLAIASLEDQNFRRLPGLLHLEIDNWPLLEEVAAGSLRGLN-LTSLSVTH 255
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
I AV A+L H ++LT L+LSHN + + + L L+EL L +++V P
Sbjct: 256 TNITAVPAAALRHQAHLTCLNLSHNPISTVPRGSFRDLVRLRELHLAGALLAVVEPQAFL 315
Query: 129 DNVTITTLTLS 139
I L LS
Sbjct: 316 GLRQIRLLNLS 326
Score = 103 (41.3 bits), Expect = 0.00012, P = 0.00012
Identities = 34/131 (25%), Positives = 56/131 (42%)
Query: 9 RLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 68
RL +L +L ++ N+ + L L L N + + +F L L L L
Sbjct: 124 RLDNLTLLDLSENKLVILLDYTFQDLHSLRRLEVGDNDLVFVSRRAFAGLLALEELTLER 183
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI--SMVTPDV 126
+ A+SG SL HL +L L L H + +L L L L +D+ + + +
Sbjct: 184 CNLTALSGESLGHLRSLGALRLRHLAIASLEDQNFRRLPGLLHLEIDNWPLLEEVAAGSL 243
Query: 127 IGDNVTITTLT 137
G N+T ++T
Sbjct: 244 RGLNLTSLSVT 254
>WB|WBGene00020649 [details] [associations]
symbol:sma-10 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0000003
"reproduction" evidence=IMP] [GO:0040018 "positive regulation of
multicellular organism growth" evidence=IMP] [GO:0007179
"transforming growth factor beta receptor signaling pathway"
evidence=IGI] [GO:0005887 "integral to plasma membrane"
evidence=IDA] [GO:0030511 "positive regulation of transforming
growth factor beta receptor signaling pathway" evidence=IDA]
[GO:0034713 "type I transforming growth factor beta receptor
binding" evidence=IPI] [GO:0005114 "type II transforming growth
factor beta receptor binding" evidence=IPI] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0005887 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0040018 GO:GO:0000003 GO:GO:0007179 GO:GO:0030511
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101816 HSSP:Q9UQH9 EMBL:FO081576
GeneID:176849 KEGG:cel:CELE_T21D12.9 CTD:176849 UCSC:T21D12.9c.1
NextBio:894278 RefSeq:NP_499896.1 ProteinModelPortal:Q965M2
SMR:Q965M2 STRING:Q965M2 EnsemblMetazoa:T21D12.9a.1
EnsemblMetazoa:T21D12.9a.2 WormBase:T21D12.9a HOGENOM:HOG000022300
InParanoid:Q965M2 OMA:PIATIHP ArrayExpress:Q965M2 Uniprot:Q965M2
Length = 881
Score = 142 (55.0 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 41/117 (35%), Positives = 62/117 (52%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L+SL+VL +++NQ S + + KL LS H N+I L SFR L L L L+ N
Sbjct: 290 LTSLEVLDLSYNQIQSFHISSWSHTPKLKWLSLHSNRIQSLPSGSFRVLRQLEELILSAN 349
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQD---LI-TPLKSLQELRLDDNDISMV 122
I ++ +L +S+L LDLS N L +D L T + L+ LR +N + ++
Sbjct: 350 SIDSLHKFALVGMSSLHKLDLSSNTLAVCVEDGAVLYNTSMPFLRSLRFTNNQLRVI 406
Score = 123 (48.4 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 36/111 (32%), Positives = 55/111 (49%)
Query: 9 RLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 68
RL L+ L + N VR A L L ++S N + L+D F A L HL+L+
Sbjct: 217 RLRKLESLDLTRNMIREVRFLAFNQLPSLQNVSLARNDVYRLDDGMFYACEGLKHLNLST 276
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
NR+ AV+ + L++L LDLS+N +++ + L+ L L N I
Sbjct: 277 NRVQAVTEGWMFGLTSLEVLDLSYNQIQSFHISSWSHTPKLKWLSLHSNRI 327
Score = 121 (47.7 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 39/117 (33%), Positives = 60/117 (51%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI- 71
LK LS+ N+ S+ G+ L +L L N ID L + +S+L LDL+ N +
Sbjct: 317 LKWLSLHSNRIQSLPSGSFRVLRQLEELILSANSIDSLHKFALVGMSSLHKLDLSSNTLA 376
Query: 72 VAVS-GASLAHLSN--LTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
V V GA L + S L +L ++N LR + + +L+EL L DN I+ + P+
Sbjct: 377 VCVEDGAVLYNTSMPFLRSLRFTNNQLRVIPKRAFERFPALEELDLTDNPIATIHPE 433
Score = 114 (45.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 32/111 (28%), Positives = 55/111 (49%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI-DVLEDHSFRALSTLSHLDLAH 68
L++++ + ++ N S + + + + L N I D+ DH F + +TL L LA
Sbjct: 146 LAAVRSVDLSRNLISYLPKPTTSAKVNIEKLDLASNSITDIGTDH-FSSFNTLVTLKLAR 204
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
N I ++ S + L L +LDL+ N +R + L SLQ + L ND+
Sbjct: 205 NHITTLNQFSFSRLRKLESLDLTRNMIREVRFLAFNQLPSLQNVSLARNDV 255
Score = 114 (45.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 34/113 (30%), Positives = 53/113 (46%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
LK L+++ N+ +V G + GL L L +NQI S+ L L L NRI
Sbjct: 269 LKHLNLSTNRVQAVTEGWMFGLTSLEVLDLSYNQIQSFHISSWSHTPKLKWLSLHSNRIQ 328
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
++ S L L L LS N + +L + + + SL +L L N +++ D
Sbjct: 329 SLPSGSFRVLRQLEELILSANSIDSLHKFALVGMSSLHKLDLSSNTLAVCVED 381
Score = 108 (43.1 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 31/111 (27%), Positives = 55/111 (49%)
Query: 9 RLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 68
+L SL+ +S+A N + G + L L+ N++ + + L++L LDL++
Sbjct: 241 QLPSLQNVSLARNDVYRLDDGMFYACEGLKHLNLSTNRVQAVTEGWMFGLTSLEVLDLSY 300
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
N+I + +S +H L L L N +++L L+ L+EL L N I
Sbjct: 301 NQIQSFHISSWSHTPKLKWLSLHSNRIQSLPSGSFRVLRQLEELILSANSI 351
Score = 108 (43.1 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 32/128 (25%), Positives = 53/128 (41%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
+++ L +A N + + + + L +L N I L SF L L LDL N I
Sbjct: 172 NIEKLDLASNSITDIGTDHFSSFNTLVTLKLARNHITTLNQFSFSRLRKLESLDLTRNMI 231
Query: 72 VAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNV 131
V + L +L + L+ N + L + + L+ L L N + VT +
Sbjct: 232 REVRFLAFNQLPSLQNVSLARNDVYRLDDGMFYACEGLKHLNLSTNRVQAVTEGWMFGLT 291
Query: 132 TITTLTLS 139
++ L LS
Sbjct: 292 SLEVLDLS 299
Score = 107 (42.7 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 32/129 (24%), Positives = 61/129 (47%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
++ ++L ++ N+ S+ + L G L +L +N I ++ F L L L++ NR
Sbjct: 52 NNTRILLLSDNEIESIDKSRLKGFYFLQTLDISNNIIRHIDFEFFYNLPNLKILNIRKNR 111
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDN 130
+ + S L +L LDL N + +T + ++ L +++ + L N IS +
Sbjct: 112 LARIPRGS-HELGHLEKLDLRSNLISTVTSEELSYLAAVRSVDLSRNLISYLPKPTTSAK 170
Query: 131 VTITTLTLS 139
V I L L+
Sbjct: 171 VNIEKLDLA 179
Score = 102 (41.0 bits), Expect = 0.00051, P = 0.00051
Identities = 33/113 (29%), Positives = 49/113 (43%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L+ L + N S+V L+ L + S+ N I L + A + LDLA N
Sbjct: 122 LGHLEKLDLRSNLISTVTSEELSYLAAVRSVDLSRNLISYLPKPTTSAKVNIEKLDLASN 181
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
I + + + L TL L+ N + L Q + L+ L+ L L N I V
Sbjct: 182 SITDIGTDHFSSFNTLVTLKLARNHITTLNQFSFSRLRKLESLDLTRNMIREV 234
>MGI|MGI:1924118 [details] [associations]
symbol:Lrrc52 "leucine rich repeat containing 52"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1924118
GO:GO:0016021 GO:GO:0005886 GO:GO:0005216 InterPro:IPR000372
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00700000104451 CTD:440699 eggNOG:NOG307084
HOGENOM:HOG000233985 HOVERGEN:HBG056592 OMA:YQNARRK
OrthoDB:EOG44MXSK EMBL:BC087947 IPI:IPI00357045
RefSeq:NP_001013400.1 UniGene:Mm.159799 ProteinModelPortal:Q5M8M9
SMR:Q5M8M9 PRIDE:Q5M8M9 Ensembl:ENSMUST00000036643 GeneID:240899
KEGG:mmu:240899 UCSC:uc007dkz.1 InParanoid:Q5M8M9 NextBio:384798
Bgee:Q5M8M9 CleanEx:MM_LRRC52 Genevestigator:Q5M8M9
GermOnline:ENSMUSG00000040485 Uniprot:Q5M8M9
Length = 314
Score = 135 (52.6 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 38/126 (30%), Positives = 67/126 (53%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
L + +N+ +S+ L L L L C +N+I + D++F + L +LDL+ N + ++S
Sbjct: 58 LYLNNNKITSLPALQLGFLSDLVYLDCQNNRIREVMDYTFIGIFRLIYLDLSSNNLTSIS 117
Query: 76 GASLAHLSNLTTLDLSHN-FLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTIT 134
S + L+NL L++SHN L L + + SL+ L L + + ++ + V +
Sbjct: 118 PFSFSVLTNLVRLNISHNPHLLYLDKYVFANTTSLRYLDLRNTGLHIIDHNGFHHLVVLQ 177
Query: 135 TLTLSG 140
TL LSG
Sbjct: 178 TLYLSG 183
>RGD|1560339 [details] [associations]
symbol:Lgr6 "leucine-rich repeat-containing G protein-coupled
receptor 6" species:10116 "Rattus norvegicus" [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016500 "protein-hormone receptor
activity" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS51450 RGD:1560339 GO:GO:0016021
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 GeneTree:ENSGT00650000092962 CTD:59352
KO:K08399 OrthoDB:EOG4SQWW8 OMA:AYGKAPS IPI:IPI00213568
RefSeq:XP_001062538.1 RefSeq:XP_573455.1 ProteinModelPortal:D3ZJU9
Ensembl:ENSRNOT00000006969 GeneID:498233 KEGG:rno:498233
UCSC:RGD:1560339 NextBio:699115 Uniprot:D3ZJU9
Length = 965
Score = 142 (55.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 36/110 (32%), Positives = 57/110 (51%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
+SL++L++ + G L +L L HNQI+ L S L + L HNR
Sbjct: 328 TSLEILTLTRAGIRLLPAGMCQQLPRLRILELSHNQIEELP--SLHRCQKLEEIGLQHNR 385
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
I + + + LS+L LDLS N +RA+ + + L+SL +L L DN ++
Sbjct: 386 IWEIGADTFSQLSSLQALDLSWNAIRAIHPEAFSTLRSLVKLDLTDNQLT 435
Score = 135 (52.6 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 42/127 (33%), Positives = 66/127 (51%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
LSSL+ L + N + + AL L L +++ N+I + D++F+ L++L L L +N
Sbjct: 161 LSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNRIRHIPDYAFQNLTSLVVLHLHNN 220
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
RI V S L NL TLDL++N L+ + T L LQEL +N+I +
Sbjct: 221 RIQHVGTHSFEGLHNLETLDLNYNELQEFPVAIRT-LGRLQELGFHNNNIKAIPEKAFMG 279
Query: 130 NVTITTL 136
N + T+
Sbjct: 280 NPLLQTI 286
Score = 126 (49.4 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 38/113 (33%), Positives = 54/113 (47%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L SLK+L + NQ + AL L L SL N I ++ + SF LS+L HL L N
Sbjct: 113 LHSLKILMLQSNQLRGIPAEALWELPSLQSLRLDANLISLVPERSFEGLSSLRHLWLDDN 172
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
+ + +L +L L + L+ N +R + L SL L L +N I V
Sbjct: 173 ALTEIPVRALNNLPALQAMTLALNRIRHIPDYAFQNLTSLVVLHLHNNRIQHV 225
Score = 121 (47.7 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 35/110 (31%), Positives = 56/110 (50%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
++L L++L ++HNQ + +L KL + HN+I + +F LS+L LDL+
Sbjct: 349 QQLPRLRILELSHNQIEELP--SLHRCQKLEEIGLQHNRIWEIGADTFSQLSSLQALDLS 406
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
N I A+ + + L +L LDL+ N L L + L L L+L N
Sbjct: 407 WNAIRAIHPEAFSTLRSLVKLDLTDNQLTTLP---LAGLGGLMHLKLKGN 453
Score = 117 (46.2 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 36/134 (26%), Positives = 59/134 (44%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
+ L +L+ +++A N+ + A L L L H+N+I + HSF L L LDL
Sbjct: 182 LNNLPALQAMTLALNRIRHIPDYAFQNLTSLVVLHLHNNRIQHVGTHSFEGLHNLETLDL 241
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDV 126
+N + A + L L L +N ++A+ + LQ + DN I V
Sbjct: 242 NYNELQEFPVA-IRTLGRLQELGFHNNNIKAIPEKAFMGNPLLQTIHFYDNPIQFVGRSA 300
Query: 127 IGDNVTITTLTLSG 140
+ TL+L+G
Sbjct: 301 FQYLSKLHTLSLNG 314
>UNIPROTKB|F1S5B4 [details] [associations]
symbol:LGR6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR002131 PRINTS:PR00373
PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 SMART:SM00013 GO:GO:0016500
GeneTree:ENSGT00650000092962 CTD:59352 KO:K08399 OMA:AYGKAPS
EMBL:CU929522 EMBL:FP565468 RefSeq:XP_003130662.2
Ensembl:ENSSSCT00000011954 GeneID:100511400 KEGG:ssc:100511400
Uniprot:F1S5B4
Length = 967
Score = 142 (55.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 42/127 (33%), Positives = 67/127 (52%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L +L+ L + N + V GAL+ L L +++ N+I + D++F+ LS+L L L +N
Sbjct: 160 LPALRHLWLDDNALTEVPVGALSSLPALQAMTLALNRISHVPDYAFQNLSSLVVLHLHNN 219
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
RI + S L +L TLDL+HN L+ + T L LQEL +N+I +
Sbjct: 220 RIQHLGAHSFEGLHSLETLDLNHNELQEFPVAIRT-LGRLQELGFHNNNIQTIPEKAFLG 278
Query: 130 NVTITTL 136
N + T+
Sbjct: 279 NPLLQTI 285
Score = 128 (50.1 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 33/112 (29%), Positives = 56/112 (50%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
+SL++L++ + G L +L L HNQI L S L + L HNR
Sbjct: 327 TSLEILTLTRAGLQRLPPGMCQQLPRLQVLELSHNQIQGLP--SLHRCQKLEKIGLQHNR 384
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
I + + + L++L LDLS N +R++ + L++L +L L N ++M+
Sbjct: 385 IWEIGADTFSQLTSLQALDLSWNAIRSIHPEAFATLRALVKLDLTHNQLTML 436
Score = 119 (46.9 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 37/110 (33%), Positives = 51/110 (46%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L SLK+L + +NQ + AL L L SL N I ++ D SF L L HL L N
Sbjct: 112 LYSLKILMLQNNQLGGIPAEALWELPSLQSLRLDANLISLVPDGSFEGLPALRHLWLDDN 171
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
+ V +L+ L L + L+ N + + L SL L L +N I
Sbjct: 172 ALTEVPVGALSSLPALQAMTLALNRISHVPDYAFQNLSSLVVLHLHNNRI 221
Score = 114 (45.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 37/98 (37%), Positives = 52/98 (53%)
Query: 30 ALAG-LDKLTS-LSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTT 87
A+ G L LT+ L N + L+ FR LS L L L+ N + + G + + L +L
Sbjct: 58 AVPGDLHPLTAYLDLSMNNLTELQPGLFRHLSFLEELRLSGNHLSHIPGQAFSGLYSLKI 117
Query: 88 LDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
L L +N L + + + L SLQ LRLD N IS+V PD
Sbjct: 118 LMLQNNQLGGIPAEALWELPSLQSLRLDANLISLV-PD 154
Score = 103 (41.3 bits), Expect = 0.00022, P = 0.00022
Identities = 39/125 (31%), Positives = 56/125 (44%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
R LS L+ L ++ N S + A +GL L L +NQ+ + + L +L L L
Sbjct: 86 RHLSFLEELRLSGNHLSHIPGQAFSGLYSLKILMLQNNQLGGIPAEALWELPSLQSLRLD 145
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI 127
N I V S L L L L N L + ++ L +LQ + L N IS V PD
Sbjct: 146 ANLISLVPDGSFEGLPALRHLWLDDNALTEVPVGALSSLPALQAMTLALNRISHV-PDYA 204
Query: 128 GDNVT 132
N++
Sbjct: 205 FQNLS 209
>TAIR|locus:2005507 [details] [associations]
symbol:ER "ERECTA" species:3702 "Arabidopsis thaliana"
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005576 "extracellular
region" evidence=ISM] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0048281
"inflorescence morphogenesis" evidence=IMP] [GO:0009944 "polarity
specification of adaxial/abaxial axis" evidence=IMP] [GO:0042742
"defense response to bacterium" evidence=IMP] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0050832 "defense response to
fungus" evidence=IMP] [GO:0010103 "stomatal complex morphogenesis"
evidence=RCA;IMP] [GO:0001558 "regulation of cell growth"
evidence=IGI;IMP] [GO:0009965 "leaf morphogenesis"
evidence=RCA;IMP] [GO:0010148 "transpiration" evidence=IMP]
[GO:0030155 "regulation of cell adhesion" evidence=IMP] [GO:0051302
"regulation of cell division" evidence=IGI;IMP] [GO:0009664
"plant-type cell wall organization" evidence=IMP] [GO:0008356
"asymmetric cell division" evidence=RCA] [GO:0010075 "regulation of
meristem growth" evidence=RCA] [GO:0031540 "regulation of
anthocyanin biosynthetic process" evidence=RCA] [GO:0019199
"transmembrane receptor protein kinase activity" evidence=ISS]
[GO:2000027 "regulation of organ morphogenesis" evidence=IMP]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000719
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
PROSITE:PS51450 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0030155 GO:GO:0050832
GO:GO:0001558 eggNOG:COG0515 GO:GO:0042742 SUPFAM:SSF56112
GO:GO:0004674 GO:GO:0010148 GO:GO:0019199 GO:GO:0009965
GO:GO:0009944 HOGENOM:HOG000116551 InterPro:IPR013210 Pfam:PF08263
GO:GO:0048281 GO:GO:0051302 GO:GO:0010103 EMBL:D83257 EMBL:U47029
EMBL:AC004484 EMBL:AY035110 EMBL:FJ708701 EMBL:AK221886
EMBL:EF598332 EMBL:EF598333 EMBL:EF598334 EMBL:EF598335
EMBL:EF598336 EMBL:EF598337 EMBL:EF598338 EMBL:EF598339
EMBL:EF598340 EMBL:EF598341 EMBL:EF598342 EMBL:EF598343
EMBL:EF598344 EMBL:EF598345 EMBL:EF598346 EMBL:EF598347
EMBL:EF598348 EMBL:EF598349 EMBL:EF598350 EMBL:EF598351
EMBL:EF598352 EMBL:EF598353 EMBL:EF598354 IPI:IPI00532140
PIR:B84659 RefSeq:NP_180201.1 UniGene:At.10804 HSSP:P58822
ProteinModelPortal:Q42371 SMR:Q42371 STRING:Q42371 PaxDb:Q42371
PRIDE:Q42371 EnsemblPlants:AT2G26330.1 GeneID:817173
KEGG:ath:AT2G26330 GeneFarm:2563 TAIR:At2g26330 InParanoid:Q42371
OMA:PSSDYCV PhylomeDB:Q42371 ProtClustDB:CLSN2687327 GO:GO:0009664
GO:GO:2000027 Uniprot:Q42371
Length = 976
Score = 142 (55.0 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 37/131 (28%), Positives = 66/131 (50%)
Query: 9 RLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 68
+L+ L L++A+N L+ L SL+ H N+ +F+ L ++++L+L+
Sbjct: 353 KLTDLFDLNVANNDLEGPIPDHLSSCTNLNSLNVHGNKFSGTIPRAFQKLESMTYLNLSS 412
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
N I L+ + NL TLDLS+N + + + L+ L ++ L N I+ V P G
Sbjct: 413 NNIKGPIPVELSRIGNLDTLDLSNNKINGIIPSSLGDLEHLLKMNLSRNHITGVVPGDFG 472
Query: 129 DNVTITTLTLS 139
+ +I + LS
Sbjct: 473 NLRSIMEIDLS 483
Score = 126 (49.4 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 36/128 (28%), Positives = 61/128 (47%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
++L L++ N+FS A L+ +T L+ N I + L LDL++N+
Sbjct: 379 TNLNSLNVHGNKFSGTIPRAFQKLESMTYLNLSSNNIKGPIPVELSRIGNLDTLDLSNNK 438
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDN 130
I + +SL L +L ++LS N + + L+S+ E+ L +NDIS P+ +
Sbjct: 439 INGIIPSSLGDLEHLLKMNLSRNHITGVVPGDFGNLRSIMEIDLSNNDISGPIPEELNQL 498
Query: 131 VTITTLTL 138
I L L
Sbjct: 499 QNIILLRL 506
>MGI|MGI:1927197 [details] [associations]
symbol:Shoc2 "soc-2 (suppressor of clear) homolog (C.
elegans)" species:10090 "Mus musculus" [GO:0000164 "protein
phosphatase type 1 complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0019903
"protein phosphatase binding" evidence=ISO] [GO:0046579 "positive
regulation of Ras protein signal transduction" evidence=ISO]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027036 PROSITE:PS51450
EMBL:AF068921 MGI:MGI:1927197 GO:GO:0005634 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
GO:GO:0046579 GO:GO:0019903 GO:GO:0000164 HOGENOM:HOG000116557
GeneTree:ENSGT00600000084236 CTD:8036 HOVERGEN:HBG055661
OMA:LPHGIGN OrthoDB:EOG408N7W PANTHER:PTHR23155:SF38 EMBL:DQ479926
EMBL:AK077798 EMBL:AK146447 EMBL:BC013722 EMBL:BC049775
EMBL:BC083060 IPI:IPI00131754 RefSeq:NP_001161977.1
RefSeq:NP_062632.2 UniGene:Mm.228669 ProteinModelPortal:O88520
SMR:O88520 IntAct:O88520 STRING:O88520 PhosphoSite:O88520
PaxDb:O88520 PRIDE:O88520 Ensembl:ENSMUST00000025932
Ensembl:ENSMUST00000169861 GeneID:56392 KEGG:mmu:56392
UCSC:uc008hxg.2 InParanoid:Q91VH8 NextBio:312492 Bgee:O88520
CleanEx:MM_SHOC2 Genevestigator:O88520
GermOnline:ENSMUSG00000024976 Uniprot:O88520
Length = 582
Score = 139 (54.0 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 38/133 (28%), Positives = 72/133 (54%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
++ L L +LSI N+ + + L L +L HNQ++ L + +++LDL
Sbjct: 211 IKNLPKLSMLSIRENKIKQLP-AEIGELCNLITLDVAHNQLEHLPKEIGNC-TQITNLDL 268
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDV 126
HN ++ + ++ +LS+L L L +N L A+ + L +L+EL L++N+IS + +
Sbjct: 269 QHNDLLDLPD-TIGNLSSLNRLGLRYNRLSAIPRSL-AKCSALEELNLENNNISTLPESL 326
Query: 127 IGDNVTITTLTLS 139
+ V + +LTL+
Sbjct: 327 LSSLVKLNSLTLA 339
Score = 137 (53.3 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 41/129 (31%), Positives = 65/129 (50%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L++L + HN+ + + LD LT+L N+I +E + L LS L + N
Sbjct: 168 LKKLRMLDLRHNKLREIP-SVVYRLDSLTTLYLRFNRITTVEK-DIKNLPKLSMLSIREN 225
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+I + A + L NL TLD++HN L L ++ I + L L ND+ + PD IG+
Sbjct: 226 KIKQLP-AEIGELCNLITLDVAHNQLEHLPKE-IGNCTQITNLDLQHNDL-LDLPDTIGN 282
Query: 130 NVTITTLTL 138
++ L L
Sbjct: 283 LSSLNRLGL 291
Score = 128 (50.1 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 38/111 (34%), Positives = 60/111 (54%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
V L SL+VL +++N + G L L KL L N+++ L + L L L L
Sbjct: 421 VSGLVSLEVLILSNNLLKKLPHG-LGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVL 478
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
+N++ + + HL+NLT L L N L L +++ T L++L+EL L+DN
Sbjct: 479 TNNQLSTLP-RGIGHLTNLTHLGLGENLLTHLPEEIGT-LENLEELYLNDN 527
Score = 127 (49.8 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 36/111 (32%), Positives = 58/111 (52%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
+ L +L L +AHNQ + + + ++T+L HN + L D + LS+L+ L L
Sbjct: 234 IGELCNLITLDVAHNQLEHLPK-EIGNCTQITNLDLQHNDLLDLPD-TIGNLSSLNRLGL 291
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
+NR+ A+ SLA S L L+L +N + L + L++ L L L L N
Sbjct: 292 RYNRLSAIP-RSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARN 341
Score = 127 (49.8 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 38/136 (27%), Positives = 68/136 (50%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T+ LSSL L + +N+ S++ R +LA L L+ +N I L + +L L+ L
Sbjct: 279 TIGNLSSLNRLGLRYNRLSAIPR-SLAKCSALEELNLENNNISTLPESLLSSLVKLNSLT 337
Query: 66 LAHN--RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVT 123
LA N ++ V G S S + +L++ HN + + + + K L +L + DN ++ +
Sbjct: 338 LARNCFQLYPVGGPS--QFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLP 395
Query: 124 PDVIGDNVTITTLTLS 139
D G ++ L L+
Sbjct: 396 LD-FGTWTSMVELNLA 410
Score = 120 (47.3 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 38/134 (28%), Positives = 66/134 (49%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
++ + S+L+ L++ +N S++ L+ L KL SL+ N + ST+ L+
Sbjct: 302 SLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 361
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
+ HNRI + + L+ L++ N L +L D T S+ EL L N ++ + D
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGT-WTSMVELNLATNQLTKIPED 420
Query: 126 VIGDNVTITTLTLS 139
V G V++ L LS
Sbjct: 421 VSG-LVSLEVLILS 433
Score = 101 (40.6 bits), Expect = 0.00078, P = 0.00078
Identities = 38/129 (29%), Positives = 63/129 (48%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L +L L+++ N +S+ +L L KL L HN++ + +R L +L+ L L N
Sbjct: 145 LVNLMTLALSENSLTSLP-DSLDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFN 202
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
RI V + +L L+ L + N ++ L + I L +L L + N + + P IG+
Sbjct: 203 RITTVE-KDIKNLPKLSMLSIRENKIKQLPAE-IGELCNLITLDVAHNQLEHL-PKEIGN 259
Query: 130 NVTITTLTL 138
IT L L
Sbjct: 260 CTQITNLDL 268
>UNIPROTKB|E1C2F8 [details] [associations]
symbol:LGR5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA]
[GO:0048839 "inner ear development" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591
SMART:SM00369 GO:GO:0016500 GeneTree:ENSGT00650000092962
OMA:FNPHFKE EMBL:AADN02009847 IPI:IPI00595522
Ensembl:ENSGALT00000016526 Uniprot:E1C2F8
Length = 834
Score = 141 (54.7 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 37/119 (31%), Positives = 63/119 (52%)
Query: 9 RLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 68
+L +L+VL +++N + KL + HHN+ID ++ +FR L++L LDLA
Sbjct: 276 QLPNLQVLDLSYNLLEDLP--CFTACKKLQKIDLHHNEIDEIKADTFRQLASLRSLDLAW 333
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI--SMVTPD 125
N+I + + + L +L LD+S N L + +T L L L+L N S+++ D
Sbjct: 334 NKIKIIHPNAFSSLPSLIKLDVSSNLLSSFP---VTGLHGLTHLKLTGNHALQSLISSD 389
Score = 114 (45.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 37/133 (27%), Positives = 64/133 (48%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
LSSL VL + +N+ S+ + GL L +L ++N +D + R L+ L L N
Sbjct: 135 LSSLVVLHLHNNRIYSLGKKCFDGLHSLETLDLNYNSLDEFPT-AIRTLTNLKELGFHSN 193
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVT--PDVI 127
I ++ + +L T+ N ++ + + L L+ L L N S +T PD+
Sbjct: 194 NIKSIPERAFVGNPSLITIHFYDNPIQLVGKSAFQNLPELRTLTL--NGASQITEFPDLT 251
Query: 128 GDNVTITTLTLSG 140
G ++ +LTL+G
Sbjct: 252 G-TTSLESLTLTG 263
Score = 110 (43.8 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 32/94 (34%), Positives = 46/94 (48%)
Query: 45 NQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLIT 104
N I L + L L L LA N + + + A L +L L L +N LR + + +
Sbjct: 2 NNITKLPSNPVHNLRFLEELRLAGNGLTYIPKGAFAGLFSLKVLMLQNNQLRQVPTEALQ 61
Query: 105 PLKSLQELRLDDNDISMVTPDVIGDNVTITTLTL 138
L+SLQ LRLD N I+ V P+ V++ L L
Sbjct: 62 NLRSLQSLRLDANHINYVPPNCFNGLVSLRHLWL 95
Score = 107 (42.7 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 35/110 (31%), Positives = 49/110 (44%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L SLKVL + +NQ V AL L L SL N I+ + + F L +L HL L N
Sbjct: 39 LFSLKVLMLQNNQLRQVPTEALQNLRSLQSLRLDANHINYVPPNCFNGLVSLRHLWLDDN 98
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
+ + + L L + L+ N + + L SL L L +N I
Sbjct: 99 SLTEIPIQAFRSLPALQAMTLALNKIHYIPDYAFGNLSSLVVLHLHNNRI 148
Score = 104 (41.7 bits), Expect = 0.00015, P = 0.00015
Identities = 32/113 (28%), Positives = 54/113 (47%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
++ L SL+ L + N + V GL L L N + + +FR+L L + L
Sbjct: 60 LQNLRSLQSLRLDANHINYVPPNCFNGLVSLRHLWLDDNSLTEIPIQAFRSLPALQAMTL 119
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
A N+I + + +LS+L L L +N + +L + L SL+ L L+ N +
Sbjct: 120 ALNKIHYIPDYAFGNLSSLVVLHLHNNRIYSLGKKCFDGLHSLETLDLNYNSL 172
>MGI|MGI:2443718 [details] [associations]
symbol:Lrig2 "leucine-rich repeats and immunoglobulin-like
domains 2" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:2443718 GO:GO:0016021 GO:GO:0005886
GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00690000101816 HOGENOM:HOG000113380
HOVERGEN:HBG052353 CTD:9860 OMA:FPTNHER OrthoDB:EOG41NTKF
EMBL:AK173030 EMBL:BC094228 IPI:IPI00605095 IPI:IPI00649164
RefSeq:NP_001020238.1 UniGene:Mm.34855 ProteinModelPortal:Q52KR2
SMR:Q52KR2 PhosphoSite:Q52KR2 PRIDE:Q52KR2
Ensembl:ENSMUST00000046316 GeneID:269473 KEGG:mmu:269473
UCSC:uc008que.1 UCSC:uc012cvk.1 InParanoid:Q52KR2 NextBio:392862
Bgee:Q52KR2 Genevestigator:Q52KR2 GermOnline:ENSMUSG00000032913
Uniprot:Q52KR2
Length = 1054
Score = 142 (55.0 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 39/134 (29%), Positives = 65/134 (48%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L++++ L + HN + V +G L GL L L N I+ + ++ LS LDL++N
Sbjct: 261 LNNMEELELEHNNLTGVNKGWLYGLRMLQQLYMSQNAIEKISPDAWEFCQRLSELDLSYN 320
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDV--- 126
++ + ++ LS L L+L N + + + L +LQ L L +NDIS D
Sbjct: 321 QLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNNDISWAIEDASEA 380
Query: 127 IGDNVTITTLTLSG 140
++T L L G
Sbjct: 381 FSGLKSLTKLILQG 394
Score = 141 (54.7 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 43/122 (35%), Positives = 65/122 (53%)
Query: 4 WCTVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 63
W +RLS L +++NQ + + A GL L L+ N++ + D FR LS L
Sbjct: 306 WEFCQRLSEL---DLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLSNLQT 362
Query: 64 LDLAHNRIV-AVSGASLAH--LSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
LDL +N I A+ AS A L +LT L L N ++++TQ L+SL+ L L++N I
Sbjct: 363 LDLRNNDISWAIEDASEAFSGLKSLTKLILQGNRIKSVTQKAFIGLESLEYLDLNNNAIM 422
Query: 121 MV 122
+
Sbjct: 423 SI 424
Score = 137 (53.3 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 38/133 (28%), Positives = 59/133 (44%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T + L SL+ L + N S ++ GA GL+ + L HN + + L L L
Sbjct: 233 TFQGLDSLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTGVNKGWLYGLRMLQQLY 292
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
++ N I +S + L+ LDLS+N L L + L L+ L L DN ++ +
Sbjct: 293 MSQNAIEKISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADG 352
Query: 126 VIGDNVTITTLTL 138
V + TL L
Sbjct: 353 VFRFLSNLQTLDL 365
Score = 136 (52.9 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 38/117 (32%), Positives = 58/117 (49%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L+ L ++ N + A +L+ L +NQ+ L++ +F LS L L+L N
Sbjct: 285 LRMLQQLYMSQNAIEKISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDN 344
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDL---ITPLKSLQELRLDDNDISMVT 123
R+ ++ LSNL TLDL +N + +D + LKSL +L L N I VT
Sbjct: 345 RVTHIADGVFRFLSNLQTLDLRNNDISWAIEDASEAFSGLKSLTKLILQGNRIKSVT 401
Score = 127 (49.8 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 35/114 (30%), Positives = 53/114 (46%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
V +L L+ L + N+ V GLD L SL N I L+D +F L+ + L+L
Sbjct: 210 VFKLPHLQFLELKRNRIKIVEGLTFQGLDSLRSLKMQRNGISKLKDGAFFGLNNMEELEL 269
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
HN + V+ L L L L +S N + ++ D + L EL L N ++
Sbjct: 270 EHNNLTGVNKGWLYGLRMLQQLYMSQNAIEKISPDAWEFCQRLSELDLSYNQLT 323
Score = 125 (49.1 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 32/114 (28%), Positives = 56/114 (49%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
SL V+ + N+ S + L L L N+I ++E +F+ L +L L + N I
Sbjct: 192 SLLVVKLNRNRISMIPPKVFK-LPHLQFLELKRNRIKIVEGLTFQGLDSLRSLKMQRNGI 250
Query: 72 VAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
+ + L+N+ L+L HN L + + + L+ LQ+L + N I ++PD
Sbjct: 251 SKLKDGAFFGLNNMEELELEHNNLTGVNKGWLYGLRMLQQLYMSQNAIEKISPD 304
Score = 108 (43.1 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 36/127 (28%), Positives = 59/127 (46%)
Query: 1 MSIWCTVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALST 60
+S W +L+ + + +N+ + + +T LS HN I + +F S
Sbjct: 86 LSNWNNTLESQTLQEVKMNYNELTEIPYFG-EPTPNITLLSLVHNLIPEINAEAFELYSA 144
Query: 61 LSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLK-SLQELRLDDNDI 119
L LDL+ N I + +S +S L L+LS+N + L L SL ++L+ N I
Sbjct: 145 LESLDLSSNIISEIKTSSFPRMS-LKYLNLSNNRISTLEAGCFDNLSDSLLVVKLNRNRI 203
Query: 120 SMVTPDV 126
SM+ P V
Sbjct: 204 SMIPPKV 210
Score = 105 (42.0 bits), Expect = 0.00015, P = 0.00015
Identities = 33/105 (31%), Positives = 55/105 (52%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID-VLEDHS--FRALSTLSHLDL 66
LS L+ L++ N+ + + G L L +L +N I +ED S F L +L+ L L
Sbjct: 333 LSLLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNNDISWAIEDASEAFSGLKSLTKLIL 392
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLI--TPLKSL 109
NRI +V+ + L +L LDL++N + ++ ++ T LK L
Sbjct: 393 QGNRIKSVTQKAFIGLESLEYLDLNNNAIMSIQENAFSQTHLKGL 437
>FB|FBgn0015399 [details] [associations]
symbol:kek1 "kekkon-1" species:7227 "Drosophila melanogaster"
[GO:0005887 "integral to plasma membrane" evidence=ISM] [GO:0048477
"oogenesis" evidence=IMP] [GO:0042059 "negative regulation of
epidermal growth factor receptor signaling pathway"
evidence=IGI;IMP;TAS] [GO:0005154 "epidermal growth factor receptor
binding" evidence=IPI] [GO:0007175 "negative regulation of
epidermal growth factor-activated receptor activity"
evidence=IDA;TAS] [GO:0016021 "integral to membrane" evidence=TAS]
[GO:0000910 "cytokinesis" evidence=IMP] [GO:0048019 "receptor
antagonist activity" evidence=IDA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0005576 GO:GO:0005887 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0022008 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0048477 GO:GO:0000910 GO:GO:0048019 InterPro:IPR013098
Pfam:PF07679 MEROPS:I43.001 GO:GO:0007175 HSSP:P07359 EMBL:U42767
ProteinModelPortal:P91643 SMR:P91643 STRING:P91643 PRIDE:P91643
FlyBase:FBgn0015399 InParanoid:P91643 OrthoDB:EOG48932C
ArrayExpress:P91643 Bgee:P91643 Uniprot:P91643
Length = 880
Score = 141 (54.7 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 39/131 (29%), Positives = 64/131 (48%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
+S K+ ++++ QF R L L KL +C +I +E +F+ L+ L LDL+HN
Sbjct: 128 MSGNKLQTLSNEQFI---RANLLNLQKLYLRNC---KIGEIERETFKGLTNLVELDLSHN 181
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+V V +L H+ +L L L+ N + + SL +L L DI ++ G
Sbjct: 182 LLVTVPSLALGHIPSLRELTLASNHIHKIESQAFGNTPSLHKLDLSHCDIQTISAQAFGG 241
Query: 130 NVTITTLTLSG 140
+T L L+G
Sbjct: 242 LQGLTLLRLNG 252
Score = 125 (49.1 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 36/112 (32%), Positives = 52/112 (46%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T + L++L L ++HN +V AL + L L+ N I +E +F +L LD
Sbjct: 166 TFKGLTNLVELDLSHNLLVTVPSLALGHIPSLRELTLASNHIHKIESQAFGNTPSLHKLD 225
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
L+H I +S + L LT L L+ N L L I L L + L DN
Sbjct: 226 LSHCDIQTISAQAFGGLQGLTLLRLNGNKLSELLPKTIETLSRLHGIELHDN 277
Score = 115 (45.5 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 31/118 (26%), Positives = 54/118 (45%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L +L+ L + + + + R GL L L HN + + + + +L L LA N
Sbjct: 146 LLNLQKLYLRNCKIGEIERETFKGLTNLVELDLSHNLLVTVPSLALGHIPSLRELTLASN 205
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI 127
I + + + +L LDLSH ++ ++ L+ L LRL+ N +S + P I
Sbjct: 206 HIHKIESQAFGNTPSLHKLDLSHCDIQTISAQAFGGLQGLTLLRLNGNKLSELLPKTI 263
>UNIPROTKB|F1SGM5 [details] [associations]
symbol:LGR4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090190 "positive regulation of branching involved in
ureteric bud morphogenesis" evidence=IEA] [GO:0072282 "metanephric
nephron tubule morphogenesis" evidence=IEA] [GO:0072224
"metanephric glomerulus development" evidence=IEA] [GO:0072202
"cell differentiation involved in metanephros development"
evidence=IEA] [GO:0061290 "canonical Wnt receptor signaling pathway
involved in metanephric kidney development" evidence=IEA]
[GO:0050673 "epithelial cell proliferation" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0030539 "male genitalia
development" evidence=IEA] [GO:0016500 "protein-hormone receptor
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021
GO:GO:0045892 GO:GO:0045893 InterPro:IPR003591 SMART:SM00369
GO:GO:0030539 GO:GO:0090190 GO:GO:0050673 GO:GO:0016500
GeneTree:ENSGT00650000092962 GO:GO:0061290 GO:GO:0072282
OMA:DGYWSDC GO:GO:0072202 GO:GO:0072224 EMBL:CU462866 EMBL:CU466955
Ensembl:ENSSSCT00000014563 Uniprot:F1SGM5
Length = 886
Score = 141 (54.7 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 42/130 (32%), Positives = 61/130 (46%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L LKVL++ +NQ +V A+ GL L SL N I + + SF L+ L HL L N
Sbjct: 39 LKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLTQLRHLWLDDN 98
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+ V L++L L L L+ N + ++ T L SL L L +N I +
Sbjct: 99 SLTEVPVQPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIKSLGQHCFDG 158
Query: 130 NVTITTLTLS 139
+ TL L+
Sbjct: 159 LDNLETLDLN 168
Score = 136 (52.9 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 42/129 (32%), Positives = 64/129 (49%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L+ L+ L + N + V L+ L L +L+ N+I + D +F LS+L L L +N
Sbjct: 87 LTQLRHLWLDDNSLTEVPVQPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNN 146
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+I ++ L NL TLDL++N L Q I L SL+EL N IS++
Sbjct: 147 KIKSLGQHCFDGLDNLETLDLNYNNLGEFPQ-AIKALPSLKELLFHSNSISVIPDGAFDG 205
Query: 130 NVTITTLTL 138
N + T+ L
Sbjct: 206 NPLLRTIHL 214
Score = 129 (50.5 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 40/120 (33%), Positives = 59/120 (49%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
L+ L +A N S + AL+GL +L L+ +NQ+ + + R LS L L L N I
Sbjct: 18 LEELRLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHIT 77
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVT 132
+V S L+ L L L N L + ++ L +LQ L L N IS + PD N++
Sbjct: 78 SVPEDSFEGLTQLRHLWLDDNSLTEVPVQPLSNLPTLQALTLALNKISSI-PDFAFTNLS 136
Score = 121 (47.7 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 34/113 (30%), Positives = 58/113 (51%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
+R LS+L+ L + N +SV + GL +L L N + + L TL L L
Sbjct: 60 IRGLSALQSLRLDANHITSVPEDSFEGLTQLRHLWLDDNSLTEVPVQPLSNLPTLQALTL 119
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
A N+I ++ + +LS+L L L +N +++L Q L +L+ L L+ N++
Sbjct: 120 ALNKISSIPDFAFTNLSSLVVLHLHNNKIKSLGQHCFDGLDNLETLDLNYNNL 172
Score = 110 (43.8 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 30/105 (28%), Positives = 54/105 (51%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
L+ L +++N + + G L +S NQI +++ +F+ L++L LDL+ N I
Sbjct: 280 LRTLDLSYNNIKDLP--SFNGCYALEEISLQRNQIHQIKEGTFQGLTSLRILDLSRNLIH 337
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
+ + A L ++T LD+S N L + + L L +L+L N
Sbjct: 338 EIHDRAFAKLGSITNLDISFNELTSFPTE---GLNGLNQLKLVGN 379
Score = 106 (42.4 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 28/81 (34%), Positives = 41/81 (50%)
Query: 45 NQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLIT 104
N I L + +F+ L L LA N + + +L+ L L L L +N L+ + + I
Sbjct: 2 NNITQLPEDAFKNFPFLEELRLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIR 61
Query: 105 PLKSLQELRLDDNDISMVTPD 125
L +LQ LRLD N I+ V D
Sbjct: 62 GLSALQSLRLDANHITSVPED 82
>TAIR|locus:2042599 [details] [associations]
symbol:AT2G16250 species:3702 "Arabidopsis thaliana"
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005886 "plasma
membrane" evidence=ISM;IDA] [GO:0006468 "protein phosphorylation"
evidence=IEA;ISS] [GO:0007169 "transmembrane receptor protein
tyrosine kinase signaling pathway" evidence=ISS] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0009505 "plant-type cell wall" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0002237 "response to
molecule of bacterial origin" evidence=RCA] [GO:0007165 "signal
transduction" evidence=RCA] [GO:0010103 "stomatal complex
morphogenesis" evidence=RCA] [GO:0048443 "stamen development"
evidence=RCA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR011009 Pfam:PF07714 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 PROSITE:PS51450 GO:GO:0016021
GO:GO:0005886 GO:GO:0009506 GO:GO:0005524 EMBL:CP002685
GenomeReviews:CT485783_GR SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.60.120.200 InterPro:IPR013320 GO:GO:0009505 EMBL:AC007047
EMBL:FJ708694 IPI:IPI00527463 PIR:C84538 RefSeq:NP_179220.2
UniGene:At.52766 ProteinModelPortal:C0LGK4 SMR:C0LGK4 PaxDb:C0LGK4
PRIDE:C0LGK4 EnsemblPlants:AT2G16250.1 GeneID:816121
KEGG:ath:AT2G16250 GeneFarm:2730 TAIR:At2g16250 eggNOG:NOG321813
HOGENOM:HOG000240381 InParanoid:Q9SIX4 OMA:AIFGSWR PhylomeDB:C0LGK4
ProtClustDB:CLSN2918663 Uniprot:C0LGK4
Length = 915
Score = 141 (54.7 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 43/136 (31%), Positives = 58/136 (42%)
Query: 4 WCTVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSH 63
W V L+ L+VL ++ + V L L L +L+ N + L S L LS
Sbjct: 122 WFGVSLLA-LEVLDLSSCSVNGVVPFTLGNLTSLRTLNLSQNSLTSLVPSSLGQLLNLSQ 180
Query: 64 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVT 123
LDL+ N V S + L NL TLD+S N+L + L L L N S
Sbjct: 181 LDLSRNSFTGVLPQSFSSLKNLLTLDVSSNYLTGPIPPGLGALSKLIHLNFSSNSFSSPI 240
Query: 124 PDVIGDNVTITTLTLS 139
P +GD V + LS
Sbjct: 241 PSELGDLVNLVDFDLS 256
Score = 113 (44.8 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 37/131 (28%), Positives = 56/131 (42%)
Query: 9 RLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 68
+L +L L ++ N F+ V + + L L +L N + ALS L HL+ +
Sbjct: 174 QLLNLSQLDLSRNSFTGVLPQSFSSLKNLLTLDVSSNYLTGPIPPGLGALSKLIHLNFSS 233
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTP-DVI 127
N + + L L NL DLS N L + L LQ + + DN +S P D+
Sbjct: 234 NSFSSPIPSELGDLVNLVDFDLSINSLSGSVPQELRKLSKLQLMAIGDNLLSGTLPVDLF 293
Query: 128 GDNVTITTLTL 138
+ TL L
Sbjct: 294 SAESQLQTLVL 304
>UNIPROTKB|Q6UXM1 [details] [associations]
symbol:LRIG3 "Leucine-rich repeats and immunoglobulin-like
domains protein 3" species:9606 "Homo sapiens" [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 CleanEx:HS_LIG3
HOGENOM:HOG000113380 HOVERGEN:HBG052353 EMBL:AY505340 EMBL:AY358288
EMBL:AY358295 EMBL:AK074921 IPI:IPI00184265 IPI:IPI00640455
RefSeq:NP_001129523.1 RefSeq:NP_700356.2 UniGene:Hs.253736
ProteinModelPortal:Q6UXM1 SMR:Q6UXM1 STRING:Q6UXM1
PhosphoSite:Q6UXM1 DMDM:73621176 PaxDb:Q6UXM1 PRIDE:Q6UXM1
Ensembl:ENST00000320743 Ensembl:ENST00000379141 GeneID:121227
KEGG:hsa:121227 UCSC:uc001sqr.3 UCSC:uc009zqh.3 CTD:121227
GeneCards:GC12M059265 HGNC:HGNC:30991 HPA:HPA010773 MIM:608870
neXtProt:NX_Q6UXM1 PharmGKB:PA134864136 InParanoid:Q6UXM1
OMA:SHHQFVT OrthoDB:EOG4K6G3K PhylomeDB:Q6UXM1 GenomeRNAi:121227
NextBio:80680 ArrayExpress:Q6UXM1 Bgee:Q6UXM1 CleanEx:HS_LRIG3
Genevestigator:Q6UXM1 GermOnline:ENSG00000139263 Uniprot:Q6UXM1
Length = 1119
Score = 142 (55.0 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 36/119 (30%), Positives = 59/119 (49%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
LS++++L + HN + + +G L GL L L N I+ + ++ LS LDL N
Sbjct: 262 LSNMEILQLDHNNLTEITKGWLYGLLMLQELHLSQNAINRISPDAWEFCQKLSELDLTFN 321
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
+ + +S LS L TL + +N + + L SL+ L L +N+IS D+ G
Sbjct: 322 HLSRLDDSSFLGLSLLNTLHIGNNRVSYIADCAFRGLSSLKTLDLKNNEISWTIEDMNG 380
Score = 140 (54.3 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 34/94 (36%), Positives = 52/94 (55%)
Query: 5 CTVRRLSSLKVLSIAHNQFS-SVR--RGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTL 61
C R LSSLK L + +N+ S ++ GA +GLDKL L N+I + +F L L
Sbjct: 353 CAFRGLSSLKTLDLKNNEISWTIEDMNGAFSGLDKLRRLILQGNRIRSITKKAFTGLDAL 412
Query: 62 SHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFL 95
HLDL+ N I+++ G + + + L L L+ + L
Sbjct: 413 EHLDLSDNAIMSLQGNAFSQMKKLQQLHLNTSSL 446
Score = 133 (51.9 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 34/115 (29%), Positives = 59/115 (51%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
++L VL + N+ S++ + L +L L + N+I ++ +F+ L L L + N
Sbjct: 192 NTLLVLKLNRNRISAIPP-KMFKLPQLQHLELNRNKIKNVDGLTFQGLGALKSLKMQRNG 250
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
+ + + LSN+ L L HN L +T+ + L LQEL L N I+ ++PD
Sbjct: 251 VTKLMDGAFWGLSNMEILQLDHNNLTEITKGWLYGLLMLQELHLSQNAINRISPD 305
Score = 129 (50.5 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 37/113 (32%), Positives = 58/113 (51%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID-VLEDHS--FRALSTLSHLDL 66
LS L L I +N+ S + A GL L +L +N+I +ED + F L L L L
Sbjct: 334 LSLLNTLHIGNNRVSYIADCAFRGLSSLKTLDLKNNEISWTIEDMNGAFSGLDKLRRLIL 393
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
NRI +++ + L L LDLS N + +L + + +K LQ+L L+ + +
Sbjct: 394 QGNRIRSITKKAFTGLDALEHLDLSDNAIMSLQGNAFSQMKKLQQLHLNTSSL 446
Score = 125 (49.1 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 35/117 (29%), Positives = 57/117 (48%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L+ L ++ N + + A KL+ L N + L+D SF LS L+ L + +N
Sbjct: 286 LLMLQELHLSQNAINRISPDAWEFCQKLSELDLTFNHLSRLDDSSFLGLSLLNTLHIGNN 345
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELR---LDDNDISMVT 123
R+ ++ + LS+L TLDL +N + +D+ L +LR L N I +T
Sbjct: 346 RVSYIADCAFRGLSSLKTLDLKNNEISWTIEDMNGAFSGLDKLRRLILQGNRIRSIT 402
Score = 123 (48.4 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 34/123 (27%), Positives = 62/123 (50%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
L ++HN+ S ++ +++ L L + ++N+++ + + + ++ L LA NRIV +
Sbjct: 79 LDLSHNRLSFIKASSMSHLQSLREVKLNNNELETIPNLG-PVSANITLLSLAGNRIVEIL 137
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITT 135
L +L TLDLS N + L P L+ L L+ N ++ + P DN+ T
Sbjct: 138 PEHLKEFQSLETLDLSSNNISELQTAF--PALQLKYLYLNSNRVTSMEPGYF-DNLANTL 194
Query: 136 LTL 138
L L
Sbjct: 195 LVL 197
Score = 112 (44.5 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 34/112 (30%), Positives = 50/112 (44%)
Query: 9 RLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 68
+L L+ L + N+ +V GL L SL N + L D +F LS + L L H
Sbjct: 213 KLPQLQHLELNRNKIKNVDGLTFQGLGALKSLKMQRNGVTKLMDGAFWGLSNMEILQLDH 272
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
N + ++ L L L L LS N + ++ D + L EL L N +S
Sbjct: 273 NNLTEITKGWLYGLLMLQELHLSQNAINRISPDAWEFCQKLSELDLTFNHLS 324
Score = 111 (44.1 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 35/133 (26%), Positives = 54/133 (40%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T + L +LK L + N + + GA GL + L HN + + L L L
Sbjct: 234 TFQGLGALKSLKMQRNGVTKLMDGAFWGLSNMEILQLDHNNLTEITKGWLYGLLMLQELH 293
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
L+ N I +S + L+ LDL+ N L L L L L + +N +S +
Sbjct: 294 LSQNAINRISPDAWEFCQKLSELDLTFNHLSRLDDSSFLGLSLLNTLHIGNNRVSYIADC 353
Query: 126 VIGDNVTITTLTL 138
++ TL L
Sbjct: 354 AFRGLSSLKTLDL 366
>RGD|1564460 [details] [associations]
symbol:Tlr11 "toll-like receptor 11" species:10116 "Rattus
norvegicus" [GO:0002755 "MyD88-dependent toll-like receptor
signaling pathway" evidence=IEA] [GO:0004888 "transmembrane
signaling receptor activity" evidence=IEA] [GO:0009617 "response to
bacterium" evidence=IEA;ISO] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0034170 "toll-like receptor 11 signaling pathway"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0050707 "regulation of cytokine secretion" evidence=IEA]
[GO:0050729 "positive regulation of inflammatory response"
evidence=IEA] InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR027194 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
RGD:1564460 GO:GO:0007165 GO:GO:0009617 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GO:GO:0005622
GeneTree:ENSGT00700000104185 SUPFAM:SSF52200 CTD:239081
HOGENOM:HOG000236285 HOVERGEN:HBG080130 OrthoDB:EOG473PQT
PANTHER:PTHR24365:SF68 EMBL:FJ539013 IPI:IPI00557597
UniGene:Rn.141275 STRING:B8YJH0 Ensembl:ENSRNOT00000039925
UCSC:RGD:1564460 NextBio:699954 Genevestigator:B8YJH0
Uniprot:B8YJH0
Length = 927
Score = 141 (54.7 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 45/136 (33%), Positives = 65/136 (47%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVR-RGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHL 64
+V S L L + NQ ++ G + GL L LS H N + L R L L L
Sbjct: 282 SVTGFSELCALDLGKNQIQNILGNGDILGLKALKFLSLHDNHLQSLPVRFLRTLPQLQKL 341
Query: 65 DLAHNRIVAVSGASLAHLS-NLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVT 123
+L+ N++ + S NLT LDLSHN L + + + L LQEL L N+IS ++
Sbjct: 342 NLSMNKLGPILELPEGLFSTNLTVLDLSHNQLCEIPRGNFSFLSQLQELWLSGNNISSLS 401
Query: 124 PDVIGDNVTITTLTLS 139
+ + + TL LS
Sbjct: 402 NESLQGLRWLRTLDLS 417
Score = 135 (52.6 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 35/104 (33%), Positives = 55/104 (52%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
++L VL ++HNQ + RG + L +L L N I L + S + L L LDL+ N+
Sbjct: 361 TNLTVLDLSHNQLCEIPRGNFSFLSQLQELWLSGNNISSLSNESLQGLRWLRTLDLSWNQ 420
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRL 114
I + L+HL LTTL+L +L ++ + K L+ L+L
Sbjct: 421 IKVLKPGWLSHLPALTTLNLLGTYLEHISGTQLQGPKMLRHLQL 464
Score = 129 (50.5 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 40/132 (30%), Positives = 67/132 (50%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALST-LSHLDLAH 68
L +LK LS+ N S+ L L +L L+ N++ + + ST L+ LDL+H
Sbjct: 311 LKALKFLSLHDNHLQSLPVRFLRTLPQLQKLNLSMNKLGPILELPEGLFSTNLTVLDLSH 370
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
N++ + + + LS L L LS N + +L+ + + L+ L+ L L N I ++ P +
Sbjct: 371 NQLCEIPRGNFSFLSQLQELWLSGNNISSLSNESLQGLRWLRTLDLSWNQIKVLKPGWLS 430
Query: 129 DNVTITTLTLSG 140
+TTL L G
Sbjct: 431 HLPALTTLNLLG 442
>UNIPROTKB|F1Q3G2 [details] [associations]
symbol:SLIT3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA] [GO:0061364
"apoptotic process involved in luteolysis" evidence=IEA]
[GO:0051414 "response to cortisol stimulus" evidence=IEA]
[GO:0050919 "negative chemotaxis" evidence=IEA] [GO:0048846 "axon
extension involved in axon guidance" evidence=IEA] [GO:0048495
"Roundabout binding" evidence=IEA] [GO:0035385 "Roundabout
signaling pathway" evidence=IEA] [GO:0032870 "cellular response to
hormone stimulus" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0010629 "negative regulation of gene
expression" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0008285 GO:GO:0005615 GO:GO:0030308 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887
PROSITE:PS01186 GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
GO:GO:0070100 Pfam:PF12661 Pfam:PF01463 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0050919 GO:GO:0035385
GO:GO:0061364 OMA:SVDCHGL EMBL:AAEX03003028 EMBL:AAEX03003027
Ensembl:ENSCAFT00000026988 Uniprot:F1Q3G2
Length = 1319
Score = 142 (55.0 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 35/110 (31%), Positives = 56/110 (50%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
++L +L+ +++++N+ VR GA G + L NQ++ + FR LS+L L L
Sbjct: 351 KKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRMFRGLSSLKTLMLR 410
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
N I VS + A LS++ L L N + +T T L SL + L N
Sbjct: 411 SNLITCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSN 460
Score = 133 (51.9 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 37/105 (35%), Positives = 53/105 (50%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
LK + I+ NQ S + A GL LTSL + N+I L F L +L L L N+I
Sbjct: 130 LKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITELAKGLFDGLVSLQLLLLNANKIN 189
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
+ + L NL L L N L+ +++ L PL+++Q L L N
Sbjct: 190 CLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQAIQTLHLAQN 234
Score = 127 (49.8 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 34/124 (27%), Positives = 61/124 (49%)
Query: 16 LSIAHNQFSSVRR-GALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAV 74
L + N+ S + G L L ++ +N+I + + +F +++ L L N++ V
Sbjct: 334 LRLNDNEISVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETV 393
Query: 75 SGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTIT 134
G LS+L TL L N + ++ D L S++ L L DN I+ +TP V+++
Sbjct: 394 HGRMFRGLSSLKTLMLRSNLITCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLS 453
Query: 135 TLTL 138
T+ L
Sbjct: 454 TINL 457
Score = 117 (46.2 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 32/86 (37%), Positives = 49/86 (56%)
Query: 56 RALSTLSHL---DLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQEL 112
R LS L HL DL++N I ++ + +++S+L+TL LS+N LR + L+SL+ L
Sbjct: 566 RELSALRHLTLIDLSNNSIGVLTNYTFSNMSHLSTLILSYNRLRCIPIHAFDGLRSLRVL 625
Query: 113 RLDDNDISMVTPDVIGDNVTITTLTL 138
L NDIS V D +++ L L
Sbjct: 626 TLHGNDISSVPEGSFSDLTSLSHLAL 651
Score = 105 (42.0 bits), Expect = 0.00019, P = 0.00019
Identities = 32/124 (25%), Positives = 55/124 (44%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
+ + N S+ GA KL + NQI + +F+ L +L+ L L N+I ++
Sbjct: 109 IRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITELA 168
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITT 135
L +L L L+ N + L + L++L L L DN + ++ + I T
Sbjct: 169 KGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQAIQT 228
Query: 136 LTLS 139
L L+
Sbjct: 229 LHLA 232
Score = 102 (41.0 bits), Expect = 0.00081, P = 0.00081
Identities = 31/104 (29%), Positives = 53/104 (50%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
L + N ++V R L+ L LT + +N I VL +++F +S LS L L++NR+ +
Sbjct: 554 LYLEGNHLTAVPR-ELSALRHLTLIDLSNNSIGVLTNYTFSNMSHLSTLILSYNRLRCIP 612
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
+ L +L L L N + ++ + + L SL L L N +
Sbjct: 613 IHAFDGLRSLRVLTLHGNDISSVPEGSFSDLTSLSHLALGTNPL 656
Score = 52 (23.4 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 12/40 (30%), Positives = 24/40 (60%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 45
T LSS+++LS+ N+ +++ GA L L++++ N
Sbjct: 421 TFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSN 460
>UNIPROTKB|E1BAW2 [details] [associations]
symbol:LRRC32 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050710 "negative regulation of cytokine secretion"
evidence=IEA] [GO:0046007 "negative regulation of activated T cell
proliferation" evidence=IEA] [GO:0010628 "positive regulation of
gene expression" evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
InterPro:IPR003591 SMART:SM00369 GO:GO:0010628 InterPro:IPR000372
SMART:SM00013 GO:GO:0046007 GO:GO:0050710
GeneTree:ENSGT00700000104185 CTD:2615 OMA:CCGNGWL EMBL:DAAA02041103
IPI:IPI00710724 RefSeq:NP_001180004.1 UniGene:Bt.88092
Ensembl:ENSBTAT00000001716 GeneID:615467 KEGG:bta:615467
NextBio:20899631 Uniprot:E1BAW2
Length = 662
Score = 139 (54.0 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 42/130 (32%), Positives = 66/130 (50%)
Query: 3 IWCTVRRL--------SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHS 54
+WC R L ++VL+++ NQ S+ L L L N+I L+
Sbjct: 34 VWCQGRGLLQVPSVLSRDIEVLNLSRNQLRSILALPLGFYTALRHLDLSANEISFLQPGV 93
Query: 55 FRALSTLSHLDLAHNRIV---AVSGASLAHLSNLTTLDLSHNFLRA-LTQDLITPLKSLQ 110
F+AL L HL+LAHN + A++ L L +LT+LDLS N L + L + L+ +L+
Sbjct: 94 FQALPHLEHLNLAHNHLAVGTALNTGGLGPLLHLTSLDLSGNSLYSGLVEQLLGEAPALR 153
Query: 111 ELRLDDNDIS 120
L L +N ++
Sbjct: 154 TLSLAENSLT 163
Score = 119 (46.9 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 39/111 (35%), Positives = 54/111 (48%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
LS L L +++N+ V G L L L SL+ N + E +L L+ LD++HN
Sbjct: 315 LSQLLNLDLSYNEIELVPEGFLEPLTSLRSLNLSRNCLRAFEAQP-GSLPCLTLLDISHN 373
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
+ + + A L +L TL L N LR L T L SLQ L L N +S
Sbjct: 374 ALETLELGARA-LGSLRTLLLQDNALRDLPLYTFTSLASLQRLNLQGNRLS 423
Score = 115 (45.5 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 30/86 (34%), Positives = 43/86 (50%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
+L+ LS+A N + + R L L H N + +ED +F AL L HL+L+ N +
Sbjct: 151 ALRTLSLAENSLTRLGRRTFLSTPALERLDLHSNVLMDIEDGAFEALPRLVHLNLSRNSL 210
Query: 72 VAVSGASLAHLSNLTTLDLSHNFLRA 97
+S SL L LDLS N + A
Sbjct: 211 TCISDFSL---QQLRVLDLSCNSIEA 233
>UNIPROTKB|Q724E2 [details] [associations]
symbol:inlD "Internalin D" species:265669 "Listeria
monocytogenes serotype 4b str. F2365" [GO:0003674
"molecular_function" evidence=ND] [GO:0009405 "pathogenesis"
evidence=ISS] [GO:0030260 "entry into host cell" evidence=ISS]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0009405 eggNOG:COG4886
InterPro:IPR014756 SUPFAM:SSF81296 EMBL:AE017262
GenomeReviews:AE017262_GR GO:GO:0030260 InterPro:IPR025875
Pfam:PF12799 InterPro:IPR019931 TIGRFAMs:TIGR01167
Gene3D:2.60.40.1220 InterPro:IPR014755 InterPro:IPR013378
InterPro:IPR012569 Pfam:PF09479 Pfam:PF08191 TIGRFAMs:TIGR02543
HOGENOM:HOG000011905 RefSeq:YP_012892.1 ProteinModelPortal:Q724E2
STRING:Q724E2 GeneID:2799473 KEGG:lmf:LMOf2365_0282 PATRIC:20321775
OMA:AESSNIA ProtClustDB:CLSK491294 Uniprot:Q724E2
Length = 568
Score = 127 (49.8 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 41/116 (35%), Positives = 70/116 (60%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRA-LSTLSHLDLAH 68
L+++ L + +N+ + + +LAGL KL L + NQ L D S A +++L L LA
Sbjct: 96 LNNIDTLILNNNKITDLN--SLAGLSKLRILEANDNQ---LSDISALANVTSLHQLRLAG 150
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTP 124
N+I ++G S +L NL T++LS+N + ++ ++ LK+L L +D NDIS ++P
Sbjct: 151 NQIKQLNGVS--NLINLETIELSNNQITDISP--VSGLKNLIGLGIDYNDISDLSP 202
Score = 33 (16.7 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 11/26 (42%), Positives = 12/26 (46%)
Query: 115 DDNDISMVTPDVIGDNVTITTLTLSG 140
D ND + VTP G N T T G
Sbjct: 507 DSNDPTTVTPTGNG-NGTSTPSNSGG 531
>UNIPROTKB|F1PSS7 [details] [associations]
symbol:SLIT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 Pfam:PF12661 Pfam:PF01463 GeneTree:ENSGT00700000104083
OMA:KCVHGKC EMBL:AAEX03015440 Ensembl:ENSCAFT00000014303
Uniprot:F1PSS7
Length = 1534
Score = 143 (55.4 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 34/113 (30%), Positives = 57/113 (50%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L+VL + NQ V RGA + +L L + NQ+ L + F+ LS LDL+ N
Sbjct: 84 LKQLRVLQLMENQIGVVERGAFDDMKELERLRLNRNQLHTLPELLFQNNQALSRLDLSEN 143
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
I A+ + ++L L L N + + + L+ L+ L L++N+I+ +
Sbjct: 144 TIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTI 196
Score = 130 (50.8 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 32/124 (25%), Positives = 62/124 (50%)
Query: 16 LSIAHNQFSSVRR-GALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAV 74
L + +N+ S + G L L ++ +N++ +ED +F +++S L L N++ ++
Sbjct: 545 LRLNNNEISILEATGIFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESI 604
Query: 75 SGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTIT 134
L L TL L +N + + D T L++++ L L DN I+ ++P ++
Sbjct: 605 RSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALS 664
Query: 135 TLTL 138
TL L
Sbjct: 665 TLNL 668
Score = 123 (48.4 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 30/107 (28%), Positives = 53/107 (49%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
++L+ LK +++++N+ S + GA G ++ L NQ++ + FR L L L L
Sbjct: 562 KKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLR 621
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRL 114
+NRI + S L N+ L L N + ++ L++L L L
Sbjct: 622 NNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALSTLNL 668
Score = 121 (47.7 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 34/105 (32%), Positives = 53/105 (50%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
L+ + +++NQ + + A GL L SL + N+I L F L TL L L N+I
Sbjct: 335 LRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKIN 394
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
V + L NL+ L L N +++L + T L+++Q L L N
Sbjct: 395 CVRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQN 439
Score = 120 (47.3 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 36/110 (32%), Positives = 60/110 (54%)
Query: 33 GLDK-LTSLSCHHNQIDVLEDHSFRALSTLSHL---DLAHNRIVAVSGASLAHLSNLTTL 88
G+ K +T L NQ ++ LST +L DL++N+I ++S +S ++S LTTL
Sbjct: 758 GIPKNVTELYLDGNQFTLVPGQ----LSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTL 813
Query: 89 DLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTLTL 138
LS+N L+ + L+SL+ L L NDIS + + D +++ L +
Sbjct: 814 ILSYNALQCIPPLAFQGLRSLRLLSLHGNDISTLREGIFTDVTSLSHLAI 863
Score = 116 (45.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 28/83 (33%), Positives = 43/83 (51%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
+S+ L + NQ S+R G GLD L +L +N+I + + SF L + L L N+
Sbjct: 589 ASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQ 648
Query: 71 IVAVSGASLAHLSNLTTLDLSHN 93
I +S + L L+TL+L N
Sbjct: 649 IATISPGAFDTLQALSTLNLLAN 671
Score = 115 (45.5 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 31/111 (27%), Positives = 52/111 (46%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
S + L + N + + + GL +L L NQI V+E +F + L L L N++
Sbjct: 62 STERLELNGNNITRIHKNDFVGLKQLRVLQLMENQIGVVERGAFDDMKELERLRLNRNQL 121
Query: 72 VAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
+ + L+ LDLS N ++A+ + L+ L+LD N IS +
Sbjct: 122 HTLPELLFQNNQALSRLDLSENTIQAIPRKAFRGATDLKNLQLDKNQISCI 172
Score = 113 (44.8 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 28/84 (33%), Positives = 41/84 (48%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
+L L ++ N ++ R A G L +L NQI +E+ +FRAL L L L +N I
Sbjct: 134 ALSRLDLSENTIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNI 193
Query: 72 VAVSGASLAHLSNLTTLDLSHNFL 95
+ +S H+ L T L N L
Sbjct: 194 TTIPVSSFNHMPKLRTFRLHSNHL 217
Score = 42 (19.8 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 107 KSLQELRLDDNDISMVTPDVIGDNVT-ITTLTLS 139
+S ELRL++N+IS++ I +T + + LS
Sbjct: 540 QSTAELRLNNNEISILEATGIFKKLTHLKKINLS 573
>UNIPROTKB|Q2HJ31 [details] [associations]
symbol:LRRC17 "Leucine rich repeat containing 17"
species:9913 "Bos taurus" [GO:0048539 "bone marrow development"
evidence=IEA] [GO:0045671 "negative regulation of osteoclast
differentiation" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005615
InterPro:IPR000483 SMART:SM00082 GO:GO:0045671 GO:GO:0048539
GeneTree:ENSGT00700000104028 CTD:10234 eggNOG:NOG263968
HOGENOM:HOG000113365 HOVERGEN:HBG052344 OMA:PIQTLDC
OrthoDB:EOG4MCX08 EMBL:DAAA02010505 EMBL:BC113338 EMBL:BT030519
IPI:IPI00704007 RefSeq:NP_001071618.1 UniGene:Bt.4886
Ensembl:ENSBTAT00000033775 GeneID:777690 KEGG:bta:777690
InParanoid:Q2HJ31 NextBio:20924262 Uniprot:Q2HJ31
Length = 441
Score = 111 (44.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 29/75 (38%), Positives = 41/75 (54%)
Query: 45 NQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLI- 103
N+I +L++ F L LDL N I + + L+ LTTL L HN ++ LT+++
Sbjct: 91 NKIRILKNSMFSKFKKLKSLDLQQNEISKIESEAFFGLNKLTTLLLQHNQIKVLTEEVFI 150
Query: 104 -TPLKSLQELRLDDN 117
TPL L LRL DN
Sbjct: 151 YTPL--LSYLRLYDN 163
Score = 101 (40.6 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 24/61 (39%), Positives = 32/61 (52%)
Query: 9 RLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 68
+ LK L + N+ S + A GL+KLT+L HNQI VL + F LS+L L
Sbjct: 103 KFKKLKSLDLQQNEISKIESEAFFGLNKLTTLLLQHNQIKVLTEEVFIYTPLLSYLRLYD 162
Query: 69 N 69
N
Sbjct: 163 N 163
Score = 68 (29.0 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 19/66 (28%), Positives = 31/66 (46%)
Query: 64 LDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVT 123
LDL+HN+I + + L L+LS N ++ + L L+EL L +N +
Sbjct: 273 LDLSHNKINQLRPKEFEDVHELKKLNLSSNGIQFIDPAAFLGLTHLEELDLSNNSLQNFD 332
Query: 124 PDVIGD 129
V+ D
Sbjct: 333 YGVLED 338
Score = 60 (26.2 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 84 NLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTP 124
++ LDLSHN + L + L++L L N I + P
Sbjct: 269 DIVKLDLSHNKINQLRPKEFEDVHELKKLNLSSNGIQFIDP 309
>UNIPROTKB|F1MLX5 [details] [associations]
symbol:LGR4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090190 "positive regulation of branching involved in
ureteric bud morphogenesis" evidence=IEA] [GO:0072282 "metanephric
nephron tubule morphogenesis" evidence=IEA] [GO:0072224
"metanephric glomerulus development" evidence=IEA] [GO:0072202
"cell differentiation involved in metanephros development"
evidence=IEA] [GO:0061290 "canonical Wnt receptor signaling pathway
involved in metanephric kidney development" evidence=IEA]
[GO:0050673 "epithelial cell proliferation" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0030539 "male genitalia
development" evidence=IEA] [GO:0016500 "protein-hormone receptor
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021
GO:GO:0045892 GO:GO:0045893 InterPro:IPR003591 SMART:SM00369
GO:GO:0030539 GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0016500
GeneTree:ENSGT00650000092962 GO:GO:0061290 GO:GO:0072282
OMA:DGYWSDC GO:GO:0072202 GO:GO:0072224 EMBL:DAAA02041144
IPI:IPI00713357 Ensembl:ENSBTAT00000003370 Uniprot:F1MLX5
Length = 1034
Score = 141 (54.7 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 42/130 (32%), Positives = 61/130 (46%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L LKVL++ +NQ +V A+ GL L SL N I + + SF L+ L HL L N
Sbjct: 187 LKELKVLTLQNNQLKTVPSEAIRGLSSLQSLRLDANHITSVPEDSFEGLTQLRHLWLDDN 246
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+ V L++L L L L+ N + ++ T L SL L L +N I +
Sbjct: 247 SLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIKSLGQHCFDG 306
Query: 130 NVTITTLTLS 139
+ TL L+
Sbjct: 307 LDNLETLDLN 316
Score = 136 (52.9 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 42/129 (32%), Positives = 64/129 (49%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L+ L+ L + N + V L+ L L +L+ N+I + D +F LS+L L L +N
Sbjct: 235 LTQLRHLWLDDNSLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNN 294
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+I ++ L NL TLDL++N L Q I L SL+EL N IS++
Sbjct: 295 KIKSLGQHCFDGLDNLETLDLNYNNLGEFPQ-AIKALPSLKELLFHSNSISVIPDGAFDG 353
Query: 130 NVTITTLTL 138
N + T+ L
Sbjct: 354 NPLLKTIHL 362
Score = 132 (51.5 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 36/113 (31%), Positives = 59/113 (52%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
+R LSSL+ L + N +SV + GL +L L N + + H L TL L L
Sbjct: 208 IRGLSSLQSLRLDANHITSVPEDSFEGLTQLRHLWLDDNSLTEVPVHPLSNLPTLQALTL 267
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
A N+I ++ + +LS+L L L +N +++L Q L +L+ L L+ N++
Sbjct: 268 ALNKISSIPDFAFTNLSSLVVLHLHNNKIKSLGQHCFDGLDNLETLDLNYNNL 320
Score = 129 (50.5 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 40/120 (33%), Positives = 60/120 (50%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
L+ L +A N S + AL+GL +L L+ +NQ+ + + R LS+L L L N I
Sbjct: 166 LEELRLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSSLQSLRLDANHIT 225
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVT 132
+V S L+ L L L N L + ++ L +LQ L L N IS + PD N++
Sbjct: 226 SVPEDSFEGLTQLRHLWLDDNSLTEVPVHPLSNLPTLQALTLALNKISSI-PDFAFTNLS 284
Score = 116 (45.9 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 32/126 (25%), Positives = 58/126 (46%)
Query: 14 KVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVA 73
++L I+ N + + A L L N + + + L L L L +N++
Sbjct: 143 QLLDISMNNITQLPEDAFKNFPFLEELRLAGNDLSFIHPKALSGLKELKVLTLQNNQLKT 202
Query: 74 VSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTI 133
V ++ LS+L +L L N + ++ +D L L+ L LDDN ++ V + + T+
Sbjct: 203 VPSEAIRGLSSLQSLRLDANHITSVPEDSFEGLTQLRHLWLDDNSLTEVPVHPLSNLPTL 262
Query: 134 TTLTLS 139
LTL+
Sbjct: 263 QALTLA 268
Score = 114 (45.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 30/105 (28%), Positives = 54/105 (51%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
L+ L +++N + + G L +S NQI +++ +F+ L++L LDL+ N I
Sbjct: 428 LRTLDLSYNSIKDLP--SFNGCHALEEISLQRNQIHQIKEDTFQGLTSLKILDLSRNLIH 485
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
+ + A L ++T LD+S N L + + L L +L+L N
Sbjct: 486 EIDDRAFAKLGSITNLDVSFNELTSFPTE---GLNGLNQLKLVGN 527
>UNIPROTKB|I3LT51 [details] [associations]
symbol:LGR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048839 "inner ear development" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR003591
SMART:SM00369 GO:GO:0048839 GeneTree:ENSGT00650000092962
EMBL:CU695170 EMBL:CU463987 EMBL:CU466536
Ensembl:ENSSSCT00000029371 OMA:YSTHILM Uniprot:I3LT51
Length = 210
Score = 128 (50.1 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 39/133 (29%), Positives = 61/133 (45%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
R LS+L+ +++A N+ + A L L L H+N+I L F L +L LDL
Sbjct: 64 RSLSALQAMTLALNKIHHIPDYAFGNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLN 123
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI 127
+N + A + LSNL L N ++++ + SL + DN I +V
Sbjct: 124 YNNLDEFPTA-IRTLSNLKELGFHSNNIKSIPEKAFVGNPSLITIHFYDNPIQLVGRSAF 182
Query: 128 GDNVTITTLTLSG 140
+ TLTL+G
Sbjct: 183 QHLPELRTLTLNG 195
Score = 119 (46.9 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 34/113 (30%), Positives = 57/113 (50%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
++ L SL+ L + N S V +GL L L N + + +FR+LS L + L
Sbjct: 15 LQNLRSLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNALTEIPVQAFRSLSALQAMTL 74
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
A N+I + + +LS+L L L +N + +L + L SL+ L L+ N++
Sbjct: 75 ALNKIHHIPDYAFGNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYNNL 127
Score = 104 (41.7 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 34/121 (28%), Positives = 56/121 (46%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
LSSL VL + +N+ S+ + GL L +L ++N +D + R LS L L N
Sbjct: 90 LSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYNNLDEFPT-AIRTLSNLKELGFHSN 148
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVT--PDVI 127
I ++ + +L T+ N ++ + + L L+ L L N S +T PD+
Sbjct: 149 NIKSIPEKAFVGNPSLITIHFYDNPIQLVGRSAFQHLPELRTLTL--NGASQITEFPDLT 206
Query: 128 G 128
G
Sbjct: 207 G 207
>UNIPROTKB|Q96NI6 [details] [associations]
symbol:LRFN5 "Leucine-rich repeat and fibronectin type-III
domain-containing protein 5" species:9606 "Homo sapiens"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
InterPro:IPR026906 Pfam:PF13306 HOGENOM:HOG000237343
HOVERGEN:HBG052352 EMBL:AK055365 EMBL:AK096627 EMBL:AL138498
EMBL:BC043165 IPI:IPI00396961 RefSeq:NP_689660.2 UniGene:Hs.136893
ProteinModelPortal:Q96NI6 SMR:Q96NI6 STRING:Q96NI6
PhosphoSite:Q96NI6 DMDM:116242620 PaxDb:Q96NI6 PRIDE:Q96NI6
DNASU:145581 Ensembl:ENST00000298119 GeneID:145581 KEGG:hsa:145581
UCSC:uc001wvm.3 CTD:145581 GeneCards:GC14P042076 HGNC:HGNC:20360
HPA:HPA001177 MIM:612811 neXtProt:NX_Q96NI6 PharmGKB:PA134888453
eggNOG:NOG249839 InParanoid:Q96NI6 KO:K16358 OMA:NAQCCKA
OrthoDB:EOG4X6C81 PhylomeDB:Q96NI6 GenomeRNAi:145581 NextBio:85141
ArrayExpress:Q96NI6 Bgee:Q96NI6 CleanEx:HS_LRFN5
Genevestigator:Q96NI6 GermOnline:ENSG00000165379 InterPro:IPR026879
PANTHER:PTHR24373:SF3 Uniprot:Q96NI6
Length = 719
Score = 139 (54.0 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 35/113 (30%), Positives = 58/113 (51%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
++SL L+++ N S + A A L L +L + N++ + + F LS L HL L +N
Sbjct: 74 MTSLVDLTLSRNTISFITPHAFADLRNLRALHLNSNRLTKITNDMFSGLSNLHHLILNNN 133
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
++ +S + + L LDLS+N L + D + + SL L LD N I +
Sbjct: 134 QLTLISSTAFDDVFALEELDLSYNNLETIPWDAVEKMVSLHTLSLDHNMIDNI 186
Score = 137 (53.3 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 35/123 (28%), Positives = 62/123 (50%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
L +A N ++++R A + L L+ N I + H+F L L L L NR+ ++
Sbjct: 56 LRLADNFVTNIKRKDFANMTSLVDLTLSRNTISFITPHAFADLRNLRALHLNSNRLTKIT 115
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITT 135
+ LSNL L L++N L ++ + +L+EL L N++ + D + V++ T
Sbjct: 116 NDMFSGLSNLHHLILNNNQLTLISSTAFDDVFALEELDLSYNNLETIPWDAVEKMVSLHT 175
Query: 136 LTL 138
L+L
Sbjct: 176 LSL 178
Score = 128 (50.1 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 30/131 (22%), Positives = 62/131 (47%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L +L+ L + N+ + + +GL L L ++NQ+ ++ +F + L LDL++N
Sbjct: 98 LRNLRALHLNSNRLTKITNDMFSGLSNLHHLILNNNQLTLISSTAFDDVFALEELDLSYN 157
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+ + ++ + +L TL L HN + + + + L + L + N + + PD +
Sbjct: 158 NLETIPWDAVEKMVSLHTLSLDHNMIDNIPKGTFSHLHKMTRLDVTSNKLQKLPPDPLFQ 217
Query: 130 NVTITTLTLSG 140
+ L SG
Sbjct: 218 RAQV--LATSG 226
Score = 109 (43.4 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 29/107 (27%), Positives = 54/107 (50%)
Query: 34 LDKLT-SLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSH 92
+D+ T L N + ++ F +++L L L+ N I ++ + A L NL L L+
Sbjct: 49 IDRRTVELRLADNFVTNIKRKDFANMTSLVDLTLSRNTISFITPHAFADLRNLRALHLNS 108
Query: 93 NFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTLTLS 139
N L +T D+ + L +L L L++N +++++ D + L LS
Sbjct: 109 NRLTKITNDMFSGLSNLHHLILNNNQLTLISSTAFDDVFALEELDLS 155
>MGI|MGI:2144814 [details] [associations]
symbol:Lrfn5 "leucine rich repeat and fibronectin type III
domain containing 5" species:10090 "Mus musculus" [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
MGI:MGI:2144814 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 MEROPS:I43.001
InterPro:IPR026906 Pfam:PF13306 HOGENOM:HOG000237343
HOVERGEN:HBG052352 GeneTree:ENSGT00660000095307 CTD:145581
eggNOG:NOG249839 KO:K16358 OMA:NAQCCKA OrthoDB:EOG4X6C81
InterPro:IPR026879 PANTHER:PTHR24373:SF3 EMBL:AK034245
EMBL:AK048443 EMBL:AK220546 EMBL:BC052038 IPI:IPI00226604
IPI:IPI00227586 RefSeq:NP_848829.2 UniGene:Mm.28802
ProteinModelPortal:Q8BXA0 SMR:Q8BXA0 STRING:Q8BXA0
PhosphoSite:Q8BXA0 PaxDb:Q8BXA0 PRIDE:Q8BXA0
Ensembl:ENSMUST00000055815 Ensembl:ENSMUST00000119481 GeneID:238205
KEGG:mmu:238205 UCSC:uc007nqm.1 UCSC:uc007nqn.1 NextBio:383687
Bgee:Q8BXA0 Genevestigator:Q8BXA0 Uniprot:Q8BXA0
Length = 719
Score = 139 (54.0 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 35/113 (30%), Positives = 58/113 (51%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
++SL L+++ N S + A A L L +L + N++ + + F LS L HL L +N
Sbjct: 74 MTSLVDLTLSRNTISFITPHAFADLRNLRALHLNSNRLTKITNDMFSGLSNLHHLILNNN 133
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
++ +S + + L LDLS+N L + D + + SL L LD N I +
Sbjct: 134 QLTLISSTAFDDVFALEELDLSYNNLETIPWDAVEKMVSLHTLSLDHNMIDNI 186
Score = 137 (53.3 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 35/123 (28%), Positives = 62/123 (50%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
L +A N ++++R A + L L+ N I + H+F L L L L NR+ ++
Sbjct: 56 LRLADNFVTNIKRKDFANMTSLVDLTLSRNTISFITPHAFADLRNLRALHLNSNRLTKIT 115
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITT 135
+ LSNL L L++N L ++ + +L+EL L N++ + D + V++ T
Sbjct: 116 NDMFSGLSNLHHLILNNNQLTLISSTAFDDVFALEELDLSYNNLETIPWDAVEKMVSLHT 175
Query: 136 LTL 138
L+L
Sbjct: 176 LSL 178
Score = 128 (50.1 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 30/131 (22%), Positives = 62/131 (47%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L +L+ L + N+ + + +GL L L ++NQ+ ++ +F + L LDL++N
Sbjct: 98 LRNLRALHLNSNRLTKITNDMFSGLSNLHHLILNNNQLTLISSTAFDDVFALEELDLSYN 157
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+ + ++ + +L TL L HN + + + + L + L + N + + PD +
Sbjct: 158 NLETIPWDAVEKMVSLHTLSLDHNMIDNIPKGTFSHLHKMTRLDVTSNKLQKLPPDPLFQ 217
Query: 130 NVTITTLTLSG 140
+ L SG
Sbjct: 218 RAQV--LATSG 226
Score = 109 (43.4 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 29/107 (27%), Positives = 54/107 (50%)
Query: 34 LDKLT-SLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSH 92
+D+ T L N + ++ F +++L L L+ N I ++ + A L NL L L+
Sbjct: 49 IDRRTVELRLADNFVTNIKRKDFANMTSLVDLTLSRNTISFITPHAFADLRNLRALHLNS 108
Query: 93 NFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTLTLS 139
N L +T D+ + L +L L L++N +++++ D + L LS
Sbjct: 109 NRLTKITNDMFSGLSNLHHLILNNNQLTLISSTAFDDVFALEELDLS 155
>RGD|1309357 [details] [associations]
symbol:Lrfn5 "leucine rich repeat and fibronectin type III
domain containing 5" species:10116 "Rattus norvegicus" [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 RGD:1309357 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 EMBL:CH473947 CTD:145581 KO:K16358 OrthoDB:EOG4X6C81
InterPro:IPR026879 PANTHER:PTHR24373:SF3 IPI:IPI00367330
RefSeq:NP_001101494.1 UniGene:Rn.224998 ProteinModelPortal:D4A1J9
Ensembl:ENSRNOT00000007520 GeneID:314164 KEGG:rno:314164
NextBio:667230 ArrayExpress:D4A1J9 Uniprot:D4A1J9
Length = 719
Score = 139 (54.0 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 35/113 (30%), Positives = 58/113 (51%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
++SL L+++ N S + A A L L +L + N++ + + F LS L HL L +N
Sbjct: 74 MTSLVDLTLSRNTISFITPHAFADLRNLRALHLNSNRLTKITNDMFSGLSNLHHLILNNN 133
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
++ +S + + L LDLS+N L + D + + SL L LD N I +
Sbjct: 134 QLTLISSTAFDDVFALEELDLSYNNLETIPWDAVEKMVSLHTLSLDHNMIDNI 186
Score = 137 (53.3 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 35/123 (28%), Positives = 62/123 (50%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
L +A N ++++R A + L L+ N I + H+F L L L L NR+ ++
Sbjct: 56 LRLADNFVTNIKRKDFANMTSLVDLTLSRNTISFITPHAFADLRNLRALHLNSNRLTKIT 115
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITT 135
+ LSNL L L++N L ++ + +L+EL L N++ + D + V++ T
Sbjct: 116 NDMFSGLSNLHHLILNNNQLTLISSTAFDDVFALEELDLSYNNLETIPWDAVEKMVSLHT 175
Query: 136 LTL 138
L+L
Sbjct: 176 LSL 178
Score = 128 (50.1 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 30/131 (22%), Positives = 62/131 (47%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L +L+ L + N+ + + +GL L L ++NQ+ ++ +F + L LDL++N
Sbjct: 98 LRNLRALHLNSNRLTKITNDMFSGLSNLHHLILNNNQLTLISSTAFDDVFALEELDLSYN 157
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+ + ++ + +L TL L HN + + + + L + L + N + + PD +
Sbjct: 158 NLETIPWDAVEKMVSLHTLSLDHNMIDNIPKGTFSHLHKMTRLDVTSNKLQKLPPDPLFQ 217
Query: 130 NVTITTLTLSG 140
+ L SG
Sbjct: 218 RAQV--LATSG 226
Score = 109 (43.4 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 29/107 (27%), Positives = 54/107 (50%)
Query: 34 LDKLT-SLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSH 92
+D+ T L N + ++ F +++L L L+ N I ++ + A L NL L L+
Sbjct: 49 IDRRTVELRLADNFVTNIKRKDFANMTSLVDLTLSRNTISFITPHAFADLRNLRALHLNS 108
Query: 93 NFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTLTLS 139
N L +T D+ + L +L L L++N +++++ D + L LS
Sbjct: 109 NRLTKITNDMFSGLSNLHHLILNNNQLTLISSTAFDDVFALEELDLS 155
>UNIPROTKB|F1SF23 [details] [associations]
symbol:LOC100520342 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0030512 "negative regulation of transforming
growth factor beta receptor signaling pathway" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0005614
"interstitial matrix" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005615
InterPro:IPR000483 SMART:SM00082 GO:GO:0030198 GO:GO:0000122
InterPro:IPR000372 SMART:SM00013 GO:GO:0030512 GO:GO:0005614
GeneTree:ENSGT00700000104286 EMBL:CU694620 RefSeq:XP_003121288.1
UniGene:Ssc.79026 Ensembl:ENSSSCT00000004699 GeneID:100520342
KEGG:ssc:100520342 OMA:LPHLKHM Uniprot:F1SF23
Length = 512
Score = 137 (53.3 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 41/112 (36%), Positives = 57/112 (50%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
+SL+VL + N S + R GL KLT L +N I L + +L +L L L N
Sbjct: 116 ASLEVLKLNDNSISVLHRSDFEGLKKLTILELKNNLISSLSPSTLSSLVSLQSLVLDGNS 175
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
I V G LA LS+LT + + +N L L T L+SLQ L L N ++ +
Sbjct: 176 IETVEGP-LA-LSHLTHMSMENNKLHLLPAGFFTSLQSLQFLSLSSNFLTQI 225
Score = 130 (50.8 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 43/115 (37%), Positives = 62/115 (53%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDK-LTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 68
L SL+ LS++ N + + L K L SL N++ V+ + L LSHL L+
Sbjct: 209 LQSLQFLSLSSNFLTQIP----INLPKSLLSLKMERNRLKVVSFEDLKHLENLSHLYLSE 264
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVT 123
N + + GA L L+NLTTL+LS N L+ L L P + LQ+L + +N I VT
Sbjct: 265 NSLSSFDGAQL--LANLTTLELSQNQLQMLPLRL--PAR-LQKLDISNNLIQKVT 314
Score = 122 (48.0 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 37/114 (32%), Positives = 58/114 (50%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L +L + +N SS+ L+ L L SL N I+ +E ALS L+H+ + +N
Sbjct: 139 LKKLTILELKNNLISSLSPSTLSSLVSLQSLVLDGNSIETVEGPL--ALSHLTHMSMENN 196
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVT 123
++ + L +L L LS NFL TQ I KSL L+++ N + +V+
Sbjct: 197 KLHLLPAGFFTSLQSLQFLSLSSNFL---TQIPINLPKSLLSLKMERNRLKVVS 247
Score = 105 (42.0 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 34/130 (26%), Positives = 63/130 (48%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
S+ K L I+H++ ++ + L + + +++ +F+ LSTL L+L N+
Sbjct: 47 STTKKLYISHSKIQHLQLSNFIQMLALEDFILLASGTESVKNDTFKTLSTLKTLELWKNK 106
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDN 130
+ + A A +L L L+ N + L + LK L L L +N IS ++P +
Sbjct: 107 LRRIPSALPA---SLEVLKLNDNSISVLHRSDFEGLKKLTILELKNNLISSLSPSTLSSL 163
Query: 131 VTITTLTLSG 140
V++ +L L G
Sbjct: 164 VSLQSLVLDG 173
Score = 103 (41.3 bits), Expect = 0.00010, P = 0.00010
Identities = 39/134 (29%), Positives = 68/134 (50%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T+ L SL+ L + N +V G LA L LT +S +N++ +L F +L +L L
Sbjct: 159 TLSSLVSLQSLVLDGNSIETVE-GPLA-LSHLTHMSMENNKLHLLPAGFFTSLQSLQFLS 216
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
L+ N + + +L +L +L + N L+ ++ + + L++L L L +N +S
Sbjct: 217 LSSNFLTQIP-INLP--KSLLSLKMERNRLKVVSFEDLKHLENLSHLYLSENSLSSFDGA 273
Query: 126 VIGDNVTITTLTLS 139
+ N +TTL LS
Sbjct: 274 QLLAN--LTTLELS 285
>UNIPROTKB|O94898 [details] [associations]
symbol:LRIG2 "Leucine-rich repeats and immunoglobulin-like
domains protein 2" species:9606 "Homo sapiens" [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886 GO:GO:0005737
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 HOGENOM:HOG000113380
HOVERGEN:HBG052353 EMBL:AB018349 EMBL:AL161998 IPI:IPI00478892
PIR:T47152 RefSeq:NP_055628.1 UniGene:Hs.448972 UniGene:Hs.729143
ProteinModelPortal:O94898 SMR:O94898 IntAct:O94898 STRING:O94898
PhosphoSite:O94898 PaxDb:O94898 PRIDE:O94898
Ensembl:ENST00000361127 GeneID:9860 KEGG:hsa:9860 UCSC:uc001edf.1
CTD:9860 GeneCards:GC01P113615 HGNC:HGNC:20889 HPA:HPA015538
MIM:608869 neXtProt:NX_O94898 PharmGKB:PA134905053
InParanoid:O94898 OMA:FPTNHER OrthoDB:EOG41NTKF GenomeRNAi:9860
NextBio:37168 Bgee:O94898 CleanEx:HS_LRIG2 Genevestigator:O94898
GermOnline:ENSG00000198799 Uniprot:O94898
Length = 1065
Score = 141 (54.7 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 37/128 (28%), Positives = 64/128 (50%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L++++ L + HN + V +G L GL L L N I+ + ++ LS LDL++N
Sbjct: 262 LNNMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAIERISPDAWEFCQRLSELDLSYN 321
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
++ + ++ LS L L+L N + + + L +LQ L L +N+IS D
Sbjct: 322 QLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNNEISWAIEDASEA 381
Query: 130 NVTITTLT 137
+T+LT
Sbjct: 382 FAGLTSLT 389
Score = 136 (52.9 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 38/133 (28%), Positives = 59/133 (44%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T + L SL+ L + N S ++ GA GL+ + L HN + + L L L
Sbjct: 234 TFQGLDSLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTRVNKGWLYGLRMLQQLY 293
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
++ N I +S + L+ LDLS+N L L + L L+ L L DN ++ +
Sbjct: 294 VSQNAIERISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADG 353
Query: 126 VIGDNVTITTLTL 138
V + TL L
Sbjct: 354 VFRFLSNLQTLDL 366
Score = 127 (49.8 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 33/115 (28%), Positives = 58/115 (50%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
SSL V+ + N+ S + + L L L N+I ++E +F+ L +L L + N
Sbjct: 192 SSLLVVKLNRNRMSMIPP-KIFKLPHLQFLELKRNRIKIVEGLTFQGLDSLRSLKMQRNG 250
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
I + + L+N+ L+L HN L + + + L+ LQ+L + N I ++PD
Sbjct: 251 ISKLKDGAFFGLNNMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAIERISPD 305
Score = 124 (48.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 34/112 (30%), Positives = 52/112 (46%)
Query: 9 RLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 68
+L L+ L + N+ V GLD L SL N I L+D +F L+ + L+L H
Sbjct: 213 KLPHLQFLELKRNRIKIVEGLTFQGLDSLRSLKMQRNGISKLKDGAFFGLNNMEELELEH 272
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
N + V+ L L L L +S N + ++ D + L EL L N ++
Sbjct: 273 NNLTRVNKGWLYGLRMLQQLYVSQNAIERISPDAWEFCQRLSELDLSYNQLT 324
Score = 106 (42.4 bits), Expect = 0.00012, P = 0.00012
Identities = 30/83 (36%), Positives = 45/83 (54%)
Query: 8 RRLSSLKVLSIAHNQFS-SVRRG--ALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHL 64
R LS+L+ L + +N+ S ++ A AGL LT L NQI + +F L +L HL
Sbjct: 356 RFLSNLQTLDLRNNEISWAIEDASEAFAGLTSLTKLILQGNQIKSITKKAFIGLESLEHL 415
Query: 65 DLAHNRIVAV--SGASLAHLSNL 85
DL +N I+++ + S HL L
Sbjct: 416 DLNNNAIMSIQENAFSQTHLKEL 438
Score = 105 (42.0 bits), Expect = 0.00015, P = 0.00015
Identities = 31/113 (27%), Positives = 62/113 (54%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID-VLEDHS--FRALSTLSHLDL 66
LS L+ L++ N+ + + G L L +L +N+I +ED S F L++L+ L L
Sbjct: 334 LSLLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNNEISWAIEDASEAFAGLTSLTKLIL 393
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
N+I +++ + L +L LDL++N + ++ ++ + L+EL L+ + +
Sbjct: 394 QGNQIKSITKKAFIGLESLEHLDLNNNAIMSIQENAFSQTH-LKELILNTSSL 445
Score = 102 (41.0 bits), Expect = 0.00064, P = 0.00064
Identities = 34/113 (30%), Positives = 55/113 (48%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
S++ +LS+ HN + AL L SL N I ++ SF + L +L+L++NR
Sbjct: 120 SNITLLSLVHNIIPEINAQALQFYPALESLDLSSNIISEIKTSSFPRMQ-LKYLNLSNNR 178
Query: 71 IVAVSGASLAHLSN-LTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
I + +LS+ L + L+ N + ++ I L LQ L L N I +V
Sbjct: 179 ITTLEAGCFDNLSSSLLVVKLNRNRM-SMIPPKIFKLPHLQFLELKRNRIKIV 230
>UNIPROTKB|B6EUU6 [details] [associations]
symbol:TLR3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051607 "defense response to virus" evidence=IEA]
[GO:0050729 "positive regulation of inflammatory response"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0043330 "response to exogenous dsRNA" evidence=IEA] [GO:0034138
"toll-like receptor 3 signaling pathway" evidence=IEA] [GO:0032722
"positive regulation of chemokine production" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0004888
"transmembrane signaling receptor activity" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0002756
"MyD88-independent toll-like receptor signaling pathway"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027173
PROSITE:PS51450 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00680000099674 PANTHER:PTHR24365:SF5 EMBL:CU466336
UniGene:Ssc.51668 EMBL:GU936198 EMBL:AB278565
Ensembl:ENSSSCT00000017208 HOVERGEN:HBG105626 Uniprot:B6EUU6
Length = 223
Score = 129 (50.5 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 43/132 (32%), Positives = 58/132 (43%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
S L L N S + L L L+ HN++ L D +F L L L N
Sbjct: 76 SQLTTLDGGFNTISKLEPELCQSLPLLEILNLQHNELSQLSDKTFIFCMNLIELHLMSNS 135
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTP---DVI 127
I + +L NL LDLSHN L + L++LQEL L +N IS + D +
Sbjct: 136 IQKIQNNPFKNLKNLIKLDLSHNGLSSTKLGTQLQLENLQELLLANNKISALKREELDFL 195
Query: 128 GDNVTITTLTLS 139
G N ++ L LS
Sbjct: 196 G-NSSLKRLELS 206
Score = 118 (46.6 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 33/115 (28%), Positives = 56/115 (48%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L++L++ HN+ S + L L N I ++++ F+ L L LDL+HN
Sbjct: 99 LPLLEILNLQHNELSQLSDKTFIFCMNLIELHLMSNSIQKIQNNPFKNLKNLIKLDLSHN 158
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPL--KSLQELRLDDNDISMV 122
+ + + L NL L L++N + AL ++ + L SL+ L L N I +
Sbjct: 159 GLSSTKLGTQLQLENLQELLLANNKISALKREELDFLGNSSLKRLELSSNQIQEI 213
Score = 110 (43.8 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 31/110 (28%), Positives = 52/110 (47%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
+++ VL++ HNQ + +LT+L N I LE ++L L L+L HN
Sbjct: 52 ANITVLNLTHNQLRRLPPANFTIYSQLTTLDGGFNTISKLEPELCQSLPLLEILNLQHNE 111
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
+ +S + NL L L N ++ + + LK+L +L L N +S
Sbjct: 112 LSQLSDKTFIFCMNLIELHLMSNSIQKIQNNPFKNLKNLIKLDLSHNGLS 161
>MGI|MGI:2442512 [details] [associations]
symbol:Lrfn3 "leucine rich repeat and fibronectin type III
domain containing 3" species:10090 "Mus musculus" [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
MGI:MGI:2442512 GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0030054 GO:GO:0045211 GO:GO:0030424
GO:GO:0030425 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0007155 GO:GO:0042734 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 SMART:SM00013 EMBL:CH466593 HOGENOM:HOG000237343
HOVERGEN:HBG052352 GeneTree:ENSGT00660000095307 CTD:79414 KO:K16356
OMA:WAVGEEE eggNOG:NOG239228 EMBL:DQ078787 EMBL:AK040916
EMBL:BC066999 EMBL:BC094593 IPI:IPI00222949 RefSeq:NP_780687.1
UniGene:Mm.23157 ProteinModelPortal:Q8BLY3 SMR:Q8BLY3 STRING:Q8BLY3
PhosphoSite:Q8BLY3 PaxDb:Q8BLY3 PRIDE:Q8BLY3
Ensembl:ENSMUST00000046351 GeneID:233067 KEGG:mmu:233067
UCSC:uc009gee.1 InParanoid:Q505E2 OrthoDB:EOG43TZV6 NextBio:381527
Bgee:Q8BLY3 Genevestigator:Q8BLY3 GermOnline:ENSMUSG00000036957
Uniprot:Q8BLY3
Length = 626
Score = 138 (53.6 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 35/117 (29%), Positives = 57/117 (48%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFR-ALSTLSHLDLAH 68
L +L+ L + N+ +S+ G L GL L L +NQ+ L + TL LDL++
Sbjct: 106 LRALRALHLDGNRLTSLGEGQLRGLVNLRHLILSNNQLAALAAGALDDCAETLEDLDLSY 165
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
N + + +L L N+ TL L HN L ++ + L L L + N ++ + PD
Sbjct: 166 NNLEQLPWEALGRLGNVNTLGLDHNLLASVPAGAFSRLHKLARLDMTSNRLTTIPPD 222
Score = 126 (49.4 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 36/114 (31%), Positives = 59/114 (51%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
++ L LS++ N V GA A L L +L N++ L + R L L HL L++N
Sbjct: 82 MTGLLHLSLSRNTIRHVAAGAFADLRALRALHLDGNRLTSLGEGQLRGLVNLRHLILSNN 141
Query: 70 RIVAVSGASLAHLSN-LTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
++ A++ +L + L LDLS+N L L + + L ++ L LD N ++ V
Sbjct: 142 QLAALAAGALDDCAETLEDLDLSYNNLEQLPWEALGRLGNVNTLGLDHNLLASV 195
Score = 117 (46.2 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 39/124 (31%), Positives = 60/124 (48%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
L +A N ++VRR LA + L LS N I + +F L L L L NR+ ++
Sbjct: 64 LRLADNFIAAVRRRDLANMTGLLHLSLSRNTIRHVAAGAFADLRALRALHLDGNRLTSLG 123
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPL-KSLQELRLDDNDISMVTPDVIGDNVTIT 134
L L NL L LS+N L AL + ++L++L L N++ + + +G +
Sbjct: 124 EGQLRGLVNLRHLILSNNQLAALAAGALDDCAETLEDLDLSYNNLEQLPWEALGRLGNVN 183
Query: 135 TLTL 138
TL L
Sbjct: 184 TLGL 187
Score = 101 (40.6 bits), Expect = 0.00086, P = 0.00086
Identities = 26/96 (27%), Positives = 49/96 (51%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGL-DKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
+R L +L+ L +++NQ +++ GAL + L L +N ++ L + L ++ L
Sbjct: 127 LRGLVNLRHLILSNNQLAALAAGALDDCAETLEDLDLSYNNLEQLPWEALGRLGNVNTLG 186
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQD 101
L HN + +V + + L L LD++ N L + D
Sbjct: 187 LDHNLLASVPAGAFSRLHKLARLDMTSNRLTTIPPD 222
>RGD|1305567 [details] [associations]
symbol:Lrfn3 "leucine rich repeat and fibronectin type III
domain containing 3" species:10116 "Rattus norvegicus" [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0042734
"presynaptic membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
RGD:1305567 GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0030054 GO:GO:0045211 GO:GO:0030424
GO:GO:0030425 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0007155 GO:GO:0042734 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 SMART:SM00013 EMBL:CH473979 HOGENOM:HOG000237343
HOVERGEN:HBG052352 GeneTree:ENSGT00660000095307 CTD:79414
eggNOG:NOG323197 KO:K16356 OMA:WAVGEEE OrthoDB:EOG43TZV6
EMBL:BC158862 IPI:IPI00367086 RefSeq:NP_001100972.1
UniGene:Rn.50030 ProteinModelPortal:B0BNK7
Ensembl:ENSRNOT00000028275 GeneID:308495 KEGG:rno:308495
UCSC:RGD:1305567 NextBio:659014 Genevestigator:B0BNK7
Uniprot:B0BNK7
Length = 626
Score = 138 (53.6 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 35/117 (29%), Positives = 57/117 (48%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFR-ALSTLSHLDLAH 68
L +L+ L + N+ +S+ G L GL L L +NQ+ L + TL LDL++
Sbjct: 106 LRALRALHLDGNRLTSLGEGQLRGLVNLRHLILSNNQLAALAAGALDDCAETLEDLDLSY 165
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
N + + +L L N+ TL L HN L ++ + L L L + N ++ + PD
Sbjct: 166 NNLEQLPWEALGRLGNVNTLGLDHNLLASVPAGAFSRLHKLARLDMTSNRLTTIPPD 222
Score = 126 (49.4 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 36/114 (31%), Positives = 59/114 (51%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
++ L LS++ N V GA A L L +L N++ L + R L L HL L++N
Sbjct: 82 MTGLLHLSLSRNTIRHVAAGAFADLRALRALHLDGNRLTSLGEGQLRGLVNLRHLILSNN 141
Query: 70 RIVAVSGASLAHLSN-LTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
++ A++ +L + L LDLS+N L L + + L ++ L LD N ++ V
Sbjct: 142 QLAALAAGALDDCAETLEDLDLSYNNLEQLPWEALGRLGNVNTLGLDHNLLASV 195
Score = 117 (46.2 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 39/124 (31%), Positives = 60/124 (48%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
L +A N ++VRR LA + L LS N I + +F L L L L NR+ ++
Sbjct: 64 LRLADNFIAAVRRRDLANMTGLLHLSLSRNTIRHVAAGAFADLRALRALHLDGNRLTSLG 123
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPL-KSLQELRLDDNDISMVTPDVIGDNVTIT 134
L L NL L LS+N L AL + ++L++L L N++ + + +G +
Sbjct: 124 EGQLRGLVNLRHLILSNNQLAALAAGALDDCAETLEDLDLSYNNLEQLPWEALGRLGNVN 183
Query: 135 TLTL 138
TL L
Sbjct: 184 TLGL 187
Score = 101 (40.6 bits), Expect = 0.00086, P = 0.00086
Identities = 26/96 (27%), Positives = 49/96 (51%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGL-DKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
+R L +L+ L +++NQ +++ GAL + L L +N ++ L + L ++ L
Sbjct: 127 LRGLVNLRHLILSNNQLAALAAGALDDCAETLEDLDLSYNNLEQLPWEALGRLGNVNTLG 186
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQD 101
L HN + +V + + L L LD++ N L + D
Sbjct: 187 LDHNLLASVPAGAFSRLHKLARLDMTSNRLTTIPPD 222
>UNIPROTKB|O15455 [details] [associations]
symbol:TLR3 "Toll-like receptor 3" species:9606 "Homo
sapiens" [GO:0006954 "inflammatory response" evidence=IEA]
[GO:0034346 "positive regulation of type III interferon production"
evidence=IEA] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0045080 "positive regulation of
chemokine biosynthetic process" evidence=IEA] [GO:0046330 "positive
regulation of JNK cascade" evidence=IEA] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=IEA] [GO:0007250 "activation of NF-kappaB-inducing kinase
activity" evidence=NAS] [GO:0016020 "membrane" evidence=NAS]
[GO:0004888 "transmembrane signaling receptor activity"
evidence=NAS] [GO:0006972 "hyperosmotic response" evidence=NAS]
[GO:0003725 "double-stranded RNA binding" evidence=IDA;NAS]
[GO:0045671 "negative regulation of osteoclast differentiation"
evidence=NAS] [GO:0045078 "positive regulation of interferon-gamma
biosynthetic process" evidence=IDA] [GO:0045356 "positive
regulation of interferon-alpha biosynthetic process" evidence=IDA]
[GO:0045359 "positive regulation of interferon-beta biosynthetic
process" evidence=IMP;IDA] [GO:0009597 "detection of virus"
evidence=NAS] [GO:0071260 "cellular response to mechanical
stimulus" evidence=IEP] [GO:0042742 "defense response to bacterium"
evidence=TAS] [GO:0004872 "receptor activity" evidence=TAS]
[GO:0005887 "integral to plasma membrane" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] [GO:0000139 "Golgi membrane"
evidence=TAS] [GO:0002756 "MyD88-independent toll-like receptor
signaling pathway" evidence=TAS] [GO:0005789 "endoplasmic reticulum
membrane" evidence=TAS] [GO:0007249 "I-kappaB kinase/NF-kappaB
cascade" evidence=TAS] [GO:0008063 "Toll signaling pathway"
evidence=TAS] [GO:0010008 "endosome membrane" evidence=TAS]
[GO:0034138 "toll-like receptor 3 signaling pathway" evidence=TAS]
[GO:0034142 "toll-like receptor 4 signaling pathway" evidence=TAS]
[GO:0035666 "TRIF-dependent toll-like receptor signaling pathway"
evidence=TAS] [GO:0036020 "endolysosome membrane" evidence=TAS]
[GO:0045087 "innate immune response" evidence=TAS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0032735 "positive regulation of
interleukin-12 production" evidence=ISS] [GO:0032760 "positive
regulation of tumor necrosis factor production" evidence=ISS]
[GO:0051607 "defense response to virus" evidence=TAS] [GO:0032728
"positive regulation of interferon-beta production" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0042346 "positive
regulation of NF-kappaB import into nucleus" evidence=IDA]
[GO:0007252 "I-kappaB phosphorylation" evidence=IDA] [GO:0032722
"positive regulation of chemokine production" evidence=IDA]
[GO:0009986 "cell surface" evidence=IDA] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IDA] [GO:0034123
"positive regulation of toll-like receptor signaling pathway"
evidence=IDA] [GO:0032757 "positive regulation of interleukin-8
production" evidence=IDA] [GO:0050729 "positive regulation of
inflammatory response" evidence=IC] InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 Reactome:REACT_6900 GO:GO:0000139
GO:GO:0005887 GO:GO:0005789 GO:GO:0043123 GO:GO:0042742
GO:GO:0006954 GO:GO:0046330 GO:GO:0045944 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0045087 GO:GO:0032722 GO:GO:0032755 GO:GO:0050729
GO:GO:0051607 GO:GO:0006972 GO:GO:0008584 GO:GO:0043065
GO:GO:0035690 EMBL:CH471056 GO:GO:0003725 GO:GO:0051092
GO:GO:0032757 GO:GO:0071260 GO:GO:0071346 GO:GO:0035458
InterPro:IPR000372 SMART:SM00013 GO:GO:0007250 GO:GO:0004888
GO:GO:0032760 GO:GO:0008063 GO:GO:0034138 GO:GO:0034142
GO:GO:0035666 GO:GO:0052033 GO:GO:0045671 GO:GO:0032735
GO:GO:0042346 GO:GO:0045078 GO:GO:0002282 GO:GO:0032728
GO:GO:0009597 GO:GO:0007252 GO:GO:0045080 SUPFAM:SSF52200
GO:GO:0071360 GO:GO:0045359 Orphanet:1930 GO:GO:0034123 CTD:7098
HOVERGEN:HBG023181 KO:K05401 OrthoDB:EOG4N30N8
PANTHER:PTHR24365:SF5 EMBL:U88879 EMBL:DQ445682 EMBL:AB445631
EMBL:BC096333 EMBL:BC096334 EMBL:BC096335 IPI:IPI00019007
RefSeq:NP_003256.1 UniGene:Hs.657724 PDB:1ZIW PDB:2A0Z PDB:3ULU
PDB:3ULV PDBsum:1ZIW PDBsum:2A0Z PDBsum:3ULU PDBsum:3ULV
ProteinModelPortal:O15455 SMR:O15455 DIP:DIP-29660N IntAct:O15455
MINT:MINT-2840066 STRING:O15455 PhosphoSite:O15455 PaxDb:O15455
PRIDE:O15455 Ensembl:ENST00000296795 GeneID:7098 KEGG:hsa:7098
UCSC:uc003iyq.3 GeneCards:GC04P186990 HGNC:HGNC:11849 HPA:CAB025658
MIM:603029 MIM:613002 neXtProt:NX_O15455 PharmGKB:PA36551
HOGENOM:HOG000251618 InParanoid:O15455 OMA:IANINDD PhylomeDB:O15455
ChEMBL:CHEMBL1075113 EvolutionaryTrace:O15455 GenomeRNAi:7098
NextBio:27769 ArrayExpress:O15455 Bgee:O15455 CleanEx:HS_TLR3
Genevestigator:O15455 GermOnline:ENSG00000164342 GO:GO:0036020
GO:GO:0045356 GO:GO:0034346 Uniprot:O15455
Length = 904
Score = 140 (54.3 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 41/133 (30%), Positives = 59/133 (44%)
Query: 9 RLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 68
R S L L + N S + L L L+ HN++ L D +F + L+ L L
Sbjct: 73 RYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMS 132
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
N I + NL TLDLSHN L + L++LQEL L +N I + + +
Sbjct: 133 NSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELD 192
Query: 129 --DNVTITTLTLS 139
N ++ L LS
Sbjct: 193 IFANSSLKKLELS 205
Score = 139 (54.0 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 39/119 (32%), Positives = 62/119 (52%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
++L LKVL++ HN+ S + A LT L N I ++++ F L LDL+
Sbjct: 96 QKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLS 155
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRAL-TQDL-ITPLKSLQELRLDDNDISMVTP 124
HN + + + L NL L LS+N ++AL +++L I SL++L L N I +P
Sbjct: 156 HNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSP 214
Score = 123 (48.4 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 33/110 (30%), Positives = 52/110 (47%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
+++ VL++ HNQ + +LTSL N I LE + L L L+L HN
Sbjct: 51 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNE 110
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
+ +S + A +NLT L L N ++ + + K+L L L N +S
Sbjct: 111 LSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLS 160
Score = 105 (42.0 bits), Expect = 0.00013, P = 0.00013
Identities = 36/127 (28%), Positives = 54/127 (42%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHS--------FRALSTL 61
L +L +L +++N +++ L GL+KL L HN + L H+ + LS L
Sbjct: 505 LRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHL 564
Query: 62 SHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISM 121
L+L N + L L +DL N L L + SL+ L L N I+
Sbjct: 565 HILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITS 624
Query: 122 VTPDVIG 128
V V G
Sbjct: 625 VEKKVFG 631
>UNIPROTKB|F1P9F0 [details] [associations]
symbol:LGR4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021
InterPro:IPR003591 SMART:SM00369 GO:GO:0016500
GeneTree:ENSGT00650000092962 OMA:DGYWSDC EMBL:AAEX03013024
Ensembl:ENSCAFT00000016178 Uniprot:F1P9F0
Length = 905
Score = 140 (54.3 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 39/110 (35%), Positives = 56/110 (50%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L LKVL++ +NQ +V A+ GL L SL N I + + SF L+ L HL L N
Sbjct: 58 LKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLAQLRHLWLDDN 117
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
++ V L++L L L L+ N + ++ T L SL L L +N I
Sbjct: 118 SLMEVPVHPLSNLPTLQALTLALNKISSIPDYAFTNLSSLVVLHLHNNKI 167
Score = 134 (52.2 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 42/129 (32%), Positives = 63/129 (48%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L+ L+ L + N V L+ L L +L+ N+I + D++F LS+L L L +N
Sbjct: 106 LAQLRHLWLDDNSLMEVPVHPLSNLPTLQALTLALNKISSIPDYAFTNLSSLVVLHLHNN 165
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+I + L NL TLDL++N L Q I L SL+EL N IS++
Sbjct: 166 KIKNLGQHCFDGLDNLETLDLNYNNLGEFPQ-AIKALPSLKELLFHSNSISVIPDGAFDG 224
Query: 130 NVTITTLTL 138
N + T+ L
Sbjct: 225 NPLLRTIHL 233
Score = 128 (50.1 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 40/120 (33%), Positives = 59/120 (49%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
L+ L +A N S + AL+GL +L L+ +NQ+ + + R LS L L L N I
Sbjct: 37 LEELRLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHIT 96
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVT 132
+V S L+ L L L N L + ++ L +LQ L L N IS + PD N++
Sbjct: 97 SVPEDSFEGLAQLRHLWLDDNSLMEVPVHPLSNLPTLQALTLALNKISSI-PDYAFTNLS 155
Score = 123 (48.4 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 35/113 (30%), Positives = 58/113 (51%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
+R LS+L+ L + N +SV + GL +L L N + + H L TL L L
Sbjct: 79 IRGLSALQSLRLDANHITSVPEDSFEGLAQLRHLWLDDNSLMEVPVHPLSNLPTLQALTL 138
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
A N+I ++ + +LS+L L L +N ++ L Q L +L+ L L+ N++
Sbjct: 139 ALNKISSIPDYAFTNLSSLVVLHLHNNKIKNLGQHCFDGLDNLETLDLNYNNL 191
Score = 114 (45.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 31/107 (28%), Positives = 57/107 (53%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
L+ L +++N + + G L +S NQI +++ +F+ L +L LDL+ N+I
Sbjct: 299 LRTLDLSYNSIKDLP--SFDGCHALEEISLQRNQIHQIKEGTFQGLVSLRILDLSRNQIH 356
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRAL-TQDL--ITPLKSLQELRLDD 116
+ + A L ++T LD+S N L + T+ L + LK + L+L +
Sbjct: 357 EIHNRAFAKLGSITNLDISFNELTSFPTEGLSGLNQLKLVGNLKLKE 403
Score = 108 (43.1 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 32/97 (32%), Positives = 48/97 (49%)
Query: 30 ALAGLDKLTSL-SCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTL 88
A+ L+ L +L N I L + +F+ L L LA N + + +L+ L L L
Sbjct: 5 AVITLNSLPALRDISMNNITQLPEDAFKNFPFLEELRLAGNDLSFIHPKALSGLKELKVL 64
Query: 89 DLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
L +N L+ + + I L +LQ LRLD N I+ V D
Sbjct: 65 TLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPED 101
>UNIPROTKB|Q9BTN0 [details] [associations]
symbol:LRFN3 "Leucine-rich repeat and fibronectin type-III
domain-containing protein 3" species:9606 "Homo sapiens"
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0042734
"presynaptic membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 GO:GO:0045211 GO:GO:0030424 GO:GO:0030425
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007155
GO:GO:0042734 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 HOGENOM:HOG000237343 HOVERGEN:HBG052352 CTD:79414
KO:K16356 OMA:WAVGEEE OrthoDB:EOG4H465G EMBL:AK172754 EMBL:AY358127
EMBL:BC003578 IPI:IPI00001577 RefSeq:NP_078785.1 UniGene:Hs.143792
ProteinModelPortal:Q9BTN0 SMR:Q9BTN0 STRING:Q9BTN0
PhosphoSite:Q9BTN0 DMDM:62286945 PRIDE:Q9BTN0 DNASU:79414
Ensembl:ENST00000246529 GeneID:79414 KEGG:hsa:79414 UCSC:uc002oco.3
GeneCards:GC19P036427 HGNC:HGNC:28370 HPA:HPA048923 MIM:612809
neXtProt:NX_Q9BTN0 PharmGKB:PA134880779 eggNOG:NOG239228
InParanoid:Q9BTN0 PhylomeDB:Q9BTN0 ChiTaRS:LRFN3 GenomeRNAi:79414
NextBio:68379 Bgee:Q9BTN0 CleanEx:HS_LRFN3 Genevestigator:Q9BTN0
GermOnline:ENSG00000126243 Uniprot:Q9BTN0
Length = 628
Score = 138 (53.6 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 35/117 (29%), Positives = 57/117 (48%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFR-ALSTLSHLDLAH 68
L +L+ L + N+ +S+ G L GL L L +NQ+ L + TL LDL++
Sbjct: 106 LRALRALHLDGNRLTSLGEGQLRGLVNLRHLILSNNQLAALAAGALDDCAETLEDLDLSY 165
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
N + + +L L N+ TL L HN L ++ + L L L + N ++ + PD
Sbjct: 166 NNLEQLPWEALGRLGNVNTLGLDHNLLASVPAGAFSRLHKLARLDMTSNRLTTIPPD 222
Score = 126 (49.4 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 36/114 (31%), Positives = 59/114 (51%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
++ L LS++ N V GA A L L +L N++ L + R L L HL L++N
Sbjct: 82 MTGLLHLSLSRNTIRHVAAGAFADLRALRALHLDGNRLTSLGEGQLRGLVNLRHLILSNN 141
Query: 70 RIVAVSGASLAHLSN-LTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
++ A++ +L + L LDLS+N L L + + L ++ L LD N ++ V
Sbjct: 142 QLAALAAGALDDCAETLEDLDLSYNNLEQLPWEALGRLGNVNTLGLDHNLLASV 195
Score = 120 (47.3 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 40/124 (32%), Positives = 60/124 (48%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
L +A N +SVRR LA + L LS N I + +F L L L L NR+ ++
Sbjct: 64 LRLADNFIASVRRRDLANMTGLLHLSLSRNTIRHVAAGAFADLRALRALHLDGNRLTSLG 123
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPL-KSLQELRLDDNDISMVTPDVIGDNVTIT 134
L L NL L LS+N L AL + ++L++L L N++ + + +G +
Sbjct: 124 EGQLRGLVNLRHLILSNNQLAALAAGALDDCAETLEDLDLSYNNLEQLPWEALGRLGNVN 183
Query: 135 TLTL 138
TL L
Sbjct: 184 TLGL 187
Score = 101 (40.6 bits), Expect = 0.00086, P = 0.00086
Identities = 26/96 (27%), Positives = 49/96 (51%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGL-DKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
+R L +L+ L +++NQ +++ GAL + L L +N ++ L + L ++ L
Sbjct: 127 LRGLVNLRHLILSNNQLAALAAGALDDCAETLEDLDLSYNNLEQLPWEALGRLGNVNTLG 186
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQD 101
L HN + +V + + L L LD++ N L + D
Sbjct: 187 LDHNLLASVPAGAFSRLHKLARLDMTSNRLTTIPPD 222
>UNIPROTKB|Q1RMS4 [details] [associations]
symbol:LRFN3 "Leucine-rich repeat and fibronectin type-III
domain-containing protein 3" species:9913 "Bos taurus" [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0042734 "presynaptic
membrane" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041
PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060 GO:GO:0016021
GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030054
GO:GO:0045211 GO:GO:0030424 GO:GO:0030425 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007155
GO:GO:0042734 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 HOGENOM:HOG000237343 HOVERGEN:HBG052352
GeneTree:ENSGT00660000095307 EMBL:BC114740 IPI:IPI00689182
RefSeq:NP_001070427.1 UniGene:Bt.55363 ProteinModelPortal:Q1RMS4
Ensembl:ENSBTAT00000000176 GeneID:767839 KEGG:bta:767839 CTD:79414
eggNOG:NOG323197 InParanoid:Q1RMS4 KO:K16356 OMA:WAVGEEE
OrthoDB:EOG4H465G NextBio:20918207 Uniprot:Q1RMS4
Length = 628
Score = 138 (53.6 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 35/117 (29%), Positives = 57/117 (48%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFR-ALSTLSHLDLAH 68
L +L+ L + N+ +S+ G L GL L L +NQ+ L + TL LDL++
Sbjct: 106 LRALRALHLDGNRLTSLGEGQLRGLVNLRHLILSNNQLAALAAGALDDCAETLEDLDLSY 165
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
N + + +L L N+ TL L HN L ++ + L L L + N ++ + PD
Sbjct: 166 NNLEQLPWEALGRLGNVNTLGLDHNLLASVPAGAFSRLHKLARLDMTSNRLTTIPPD 222
Score = 125 (49.1 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 39/123 (31%), Positives = 63/123 (51%)
Query: 6 TVRR-----LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALST 60
TVRR ++ L LS++ N V GA + L L +L N++ L + R L
Sbjct: 73 TVRRRDLANMTGLLHLSLSRNTIRHVAAGAFSDLRALRALHLDGNRLTSLGEGQLRGLVN 132
Query: 61 LSHLDLAHNRIVAVSGASLAHLSN-LTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
L HL L++N++ A++ +L + L LDLS+N L L + + L ++ L LD N +
Sbjct: 133 LRHLILSNNQLAALAAGALDDCAETLEDLDLSYNNLEQLPWEALGRLGNVNTLGLDHNLL 192
Query: 120 SMV 122
+ V
Sbjct: 193 ASV 195
Score = 117 (46.2 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 39/124 (31%), Positives = 60/124 (48%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
L +A N ++VRR LA + L LS N I + +F L L L L NR+ ++
Sbjct: 64 LRLADNFIATVRRRDLANMTGLLHLSLSRNTIRHVAAGAFSDLRALRALHLDGNRLTSLG 123
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPL-KSLQELRLDDNDISMVTPDVIGDNVTIT 134
L L NL L LS+N L AL + ++L++L L N++ + + +G +
Sbjct: 124 EGQLRGLVNLRHLILSNNQLAALAAGALDDCAETLEDLDLSYNNLEQLPWEALGRLGNVN 183
Query: 135 TLTL 138
TL L
Sbjct: 184 TLGL 187
>MGI|MGI:3045226 [details] [associations]
symbol:Tlr11 "toll-like receptor 11" species:10090 "Mus
musculus" [GO:0006954 "inflammatory response" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0009617
"response to bacterium" evidence=IMP] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045087 "innate immune response" evidence=IEA]
InterPro:IPR000157 InterPro:IPR001611 InterPro:IPR027194
Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450 MGI:MGI:3045226
GO:GO:0016021 GO:GO:0007165 GO:GO:0009617 GO:GO:0006954
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0045087
GO:GO:0005622 GeneTree:ENSGT00700000104185 SUPFAM:SSF52200
EMBL:AY510704 IPI:IPI00409846 RefSeq:NP_991388.2 UniGene:Mm.291512
ProteinModelPortal:Q6R5P0 SMR:Q6R5P0 STRING:Q6R5P0 PRIDE:Q6R5P0
Ensembl:ENSMUST00000063570 GeneID:239081 UCSC:uc007tkz.1 CTD:239081
HOGENOM:HOG000236285 HOVERGEN:HBG080130 InParanoid:Q6R5P0
OMA:ELRLATY OrthoDB:EOG473PQT NextBio:383971 Bgee:Q6R5P0
CleanEx:MM_TLR11 Genevestigator:Q6R5P0
GermOnline:ENSMUSG00000051969 PANTHER:PTHR24365:SF68 Uniprot:Q6R5P0
Length = 926
Score = 140 (54.3 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 39/114 (34%), Positives = 59/114 (51%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
++LKVL +++NQ V GAL+ L +L L N I L + S + L L LDL+ N+
Sbjct: 361 TNLKVLDLSYNQLCDVPHGALSLLSQLQELWLSGNNISSLSNESLQGLRQLRTLDLSWNQ 420
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTP 124
I + L+HL LTTL+L +L + + K L+ L+L I + P
Sbjct: 421 IKVLKPGWLSHLPALTTLNLLGTYLEYILGIQLQGPKMLRHLQLGSYPILDIYP 474
Score = 132 (51.5 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 40/131 (30%), Positives = 61/131 (46%)
Query: 11 SSLKVLSIAHNQFSSV-RRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
S L+ L + NQ ++ G + G L LS H N + L L L L+L+ N
Sbjct: 287 SELRALDLGKNQIQNILENGEIPGYKALEFLSLHDNHLQTLPTRFLHTLPQLQKLNLSMN 346
Query: 70 RIVAVSGASLAHLS-NLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
++ + S NL LDLS+N L + ++ L LQEL L N+IS ++ + +
Sbjct: 347 KLGPILELPEGLFSTNLKVLDLSYNQLCDVPHGALSLLSQLQELWLSGNNISSLSNESLQ 406
Query: 129 DNVTITTLTLS 139
+ TL LS
Sbjct: 407 GLRQLRTLDLS 417
Score = 117 (46.2 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 38/130 (29%), Positives = 66/130 (50%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALST-LSHLDLAHNR 70
+L+ LS+ N ++ L L +L L+ N++ + + ST L LDL++N+
Sbjct: 313 ALEFLSLHDNHLQTLPTRFLHTLPQLQKLNLSMNKLGPILELPEGLFSTNLKVLDLSYNQ 372
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDN 130
+ V +L+ LS L L LS N + +L+ + + L+ L+ L L N I ++ P +
Sbjct: 373 LCDVPHGALSLLSQLQELWLSGNNISSLSNESLQGLRQLRTLDLSWNQIKVLKPGWLSHL 432
Query: 131 VTITTLTLSG 140
+TTL L G
Sbjct: 433 PALTTLNLLG 442
>WB|WBGene00002282 [details] [associations]
symbol:let-4 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0002064
"epithelial cell development" evidence=IMP] [GO:0035150 "regulation
of tube size" evidence=IMP] [GO:0045177 "apical part of cell"
evidence=IDA] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0009792
GO:GO:0006898 GO:GO:0040010 GO:GO:0002119 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GO:GO:0045177 GO:GO:0040011
GO:GO:0040018 GO:GO:0002064 GeneTree:ENSGT00700000104286
GO:GO:0035150 EMBL:Z79598 EMBL:JQ292907 RefSeq:NP_510425.2
ProteinModelPortal:Q93373 SMR:Q93373 STRING:Q93373
EnsemblMetazoa:C44H4.2 GeneID:181554 KEGG:cel:CELE_C44H4.2
CTD:181554 WormBase:C44H4.2 HOGENOM:HOG000018354 OMA:PLVCTEN
Uniprot:Q93373
Length = 773
Score = 139 (54.0 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 36/128 (28%), Positives = 65/128 (50%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
SL+ L ++ N+ + + ++L L +N+I + +S L L L LAHN+I
Sbjct: 257 SLRYLYLSGNKITKLTAYQFQTFEQLEMLDLTNNEIGAIPANSLSGLKQLRQLYLAHNKI 316
Query: 72 VAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNV 131
+S + + S++ L LS N L+ LT +I+ L +LQ++ DN I + + D
Sbjct: 317 SNISSNAFTN-SSIVVLVLSSNELKTLTAGIISGLPNLQQVSFRDNQIKTINRNAFYDAA 375
Query: 132 TITTLTLS 139
++ L L+
Sbjct: 376 SLVMLDLA 383
Score = 137 (53.3 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 34/112 (30%), Positives = 63/112 (56%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
+S++ +++ HN ++V A+ GL +L SL H N+I+ L+ +F L L+ L+LA N+
Sbjct: 184 NSIQTINLGHNNMTAVPSSAIRGLKQLQSLHLHKNRIEQLDALNFLNLPVLNLLNLAGNQ 243
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
I ++ + ++ +L L LS N + LT + L+ L L +N+I +
Sbjct: 244 IHELNRQAFLNVPSLRYLYLSGNKITKLTAYQFQTFEQLEMLDLTNNEIGAI 295
Score = 135 (52.6 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 35/112 (31%), Positives = 57/112 (50%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI-DVLEDHSFRALSTLSHLDLAHNRI 71
L+ + + HN V ALAGL L L +N I ++ E F L+ L ++L N+I
Sbjct: 112 LEEVVLNHNLIEKVPAAALAGLPNLLRLDLSNNSIVEIQEQEIFPNLNKLYDINLGSNKI 171
Query: 72 VAVSGASLAHLSN-LTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
++ ++ ++ N + T++L HN + A+ I LK LQ L L N I +
Sbjct: 172 FSIHTSTFQNVKNSIQTINLGHNNMTAVPSSAIRGLKQLQSLHLHKNRIEQL 223
Score = 121 (47.7 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 37/133 (27%), Positives = 64/133 (48%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
+R L L+ L + N+ + L L L+ NQI L +F + +L +L L
Sbjct: 204 IRGLKQLQSLHLHKNRIEQLDALNFLNLPVLNLLNLAGNQIHELNRQAFLNVPSLRYLYL 263
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDV 126
+ N+I ++ L LDL++N + A+ + ++ LK L++L L N IS ++ +
Sbjct: 264 SGNKITKLTAYQFQTFEQLEMLDLTNNEIGAIPANSLSGLKQLRQLYLAHNKISNISSNA 323
Query: 127 IGDNVTITTLTLS 139
N +I L LS
Sbjct: 324 F-TNSSIVVLVLS 335
Score = 117 (46.2 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 30/86 (34%), Positives = 50/86 (58%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
SS+ VL ++ N+ ++ G ++GL L +S NQI + ++F ++L LDLA N+
Sbjct: 327 SSIVVLVLSSNELKTLTAGIISGLPNLQQVSFRDNQIKTINRNAFYDAASLVMLDLAKNQ 386
Query: 71 IVAVSGAS-LAHLSNLTTLDLSHNFL 95
+ ++ + LA L NL +DLS N L
Sbjct: 387 LTEIAPTTFLAQL-NLLLVDLSENKL 411
Score = 106 (42.4 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 34/103 (33%), Positives = 51/103 (49%)
Query: 40 LSCHHNQIDVLEDHSFRALS-TLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRAL 98
L N+I ++D +F ++ L + L HN I V A+LA L NL LDLS+N + +
Sbjct: 90 LDLSQNKIKKIDDAAFAGINPVLEEVVLNHNLIEKVPAAALAGLPNLLRLDLSNNSIVEI 149
Query: 99 TQDLITP-LKSLQELRLDDNDISMVTPDVIGDNV--TITTLTL 138
+ I P L L ++ L N I + NV +I T+ L
Sbjct: 150 QEQEIFPNLNKLYDINLGSNKIFSIHTSTF-QNVKNSIQTINL 191
>ZFIN|ZDB-GENE-061026-3 [details] [associations]
symbol:nyx "nyctalopin" species:7955 "Danio rerio"
[GO:0007634 "optokinetic behavior" evidence=IMP] [GO:0007601
"visual perception" evidence=IMP] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 ZFIN:ZDB-GENE-061026-3 GO:GO:0007601 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 SMART:SM00013 GO:GO:0007634 CTD:60506
HOGENOM:HOG000230477 HOVERGEN:HBG031762 KO:K08129 OMA:NISFITP
OrthoDB:EOG43JC4W GeneTree:ENSGT00690000101803 EMBL:BX545856
EMBL:BC163107 EMBL:BC163110 EMBL:DQ201193 IPI:IPI00508128
RefSeq:NP_001071085.1 UniGene:Dr.82636 Ensembl:ENSDART00000088569
GeneID:568821 KEGG:dre:568821 InParanoid:Q00P20 NextBio:20889357
Uniprot:Q00P20
Length = 469
Score = 136 (52.9 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 40/134 (29%), Positives = 70/134 (52%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
+R + +L + + N+ +V +L GL L L+ N+I+V+ D +F+ L L + L
Sbjct: 174 LRGMENLTHVYLERNKIEAVAYNSLLGLTSLKYLNLQENRINVIHDEAFKDLIRLENFYL 233
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDV 126
N +V + + LSNL L+L N L +++ + L L+ L LD N +S + D
Sbjct: 234 NDNLLVDLPQQAFKGLSNLKMLNLGGNLLTNVSKTWFSDLVELEVLYLDRNRLSYIE-DG 292
Query: 127 IGDNVT-ITTLTLS 139
+N+T + TL L+
Sbjct: 293 SFENLTSLITLHLN 306
Score = 128 (50.1 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 39/127 (30%), Positives = 60/127 (47%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
+LK L N F V GAL G++ LT + N+I+ + +S L++L +L+L NRI
Sbjct: 156 TLKELLCFQNNFRRVP-GALRGMENLTHVYLERNKIEAVAYNSLLGLTSLKYLNLQENRI 214
Query: 72 VAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNV 131
+ + L L L+ N L L Q L +L+ L L N ++ V+ D V
Sbjct: 215 NVIHDEAFKDLIRLENFYLNDNLLVDLPQQAFKGLSNLKMLNLGGNLLTNVSKTWFSDLV 274
Query: 132 TITTLTL 138
+ L L
Sbjct: 275 ELEVLYL 281
Score = 105 (42.0 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 30/102 (29%), Positives = 53/102 (51%)
Query: 38 TSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHN-FLR 96
+S++ N + L + +F L +L L L +N I ++ + L NL L ++HN ++R
Sbjct: 61 SSINLDKNSLKFLSERAFGTLPSLKTLSLKYNNISFITPGAFKGLPNLVELKMAHNEYIR 120
Query: 97 ALTQDLITPLKSLQELRLDDNDISMVT-PD-VIGDNVTITTL 136
L T LK L +RLD +D ++ PD + + +T+ L
Sbjct: 121 YLHTRTFTALKRL--VRLDLSDCNLFNMPDRIFLEQITLKEL 160
Score = 105 (42.0 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 32/111 (28%), Positives = 52/111 (46%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L+SLK L++ N+ + + A L +L + + N + L +F+ LS L L+L N
Sbjct: 201 LTSLKYLNLQENRINVIHDEAFKDLIRLENFYLNDNLLVDLPQQAFKGLSNLKMLNLGGN 260
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
+ VS + L L L L N L + L SL L L+ N+++
Sbjct: 261 LLTNVSKTWFSDLVELEVLYLDRNRLSYIEDGSFENLTSLITLHLNSNNLT 311
Score = 105 (42.0 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 36/115 (31%), Positives = 51/115 (44%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQ-IDVLEDHSFRALSTLSHLDLAH 68
L SLK LS+ +N S + GA GL L L HN+ I L +F AL L LDL+
Sbjct: 81 LPSLKTLSLKYNNISFITPGAFKGLPNLVELKMAHNEYIRYLHTRTFTALKRLVRLDLSD 140
Query: 69 -NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
N L ++ L +NF R + +++L + L+ N I V
Sbjct: 141 CNLFNMPDRIFLEQITLKELLCFQNNFRRV--PGALRGMENLTHVYLERNKIEAV 193
Score = 100 (40.3 bits), Expect = 0.00093, P = 0.00093
Identities = 34/131 (25%), Positives = 57/131 (43%)
Query: 10 LSSLKVLSIAHNQFSS-VRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 68
L +L L +AHN++ + L +L L + + D F TL L
Sbjct: 105 LPNLVELKMAHNEYIRYLHTRTFTALKRLVRLDLSDCNLFNMPDRIFLEQITLKELLCFQ 164
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
N V GA L + NLT + L N + A+ + + L SL+ L L +N I+++ +
Sbjct: 165 NNFRRVPGA-LRGMENLTHVYLERNKIEAVAYNSLLGLTSLKYLNLQENRINVIHDEAFK 223
Query: 129 DNVTITTLTLS 139
D + + L+
Sbjct: 224 DLIRLENFYLN 234
>ZFIN|ZDB-GENE-040310-3 [details] [associations]
symbol:rtn4rl1b "reticulon 4 receptor-like 1b"
species:7955 "Danio rerio" [GO:0005515 "protein binding"
evidence=IPI] ZFIN:ZDB-GENE-040310-3 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 HOGENOM:HOG000116109 HOVERGEN:HBG063707 KO:K16660
EMBL:BC163592 EMBL:AY263333 IPI:IPI00505158 RefSeq:NP_982347.1
UniGene:Dr.134948 SMR:Q6WZD2 IntAct:Q6WZD2 GeneID:403308
KEGG:dre:403308 CTD:403308 InParanoid:Q6WZD2 NextBio:20816917
Uniprot:Q6WZD2
Length = 478
Score = 136 (52.9 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 36/108 (33%), Positives = 55/108 (50%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L +L+ L + N ++ L L+ L H N++ L ++FR L L L L HN
Sbjct: 146 LRNLQYLYLQDNHLEYLQDDLFVDLHNLSHLFLHGNRLWSLHQNTFRGLGALDRLLLHHN 205
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
++ V + L LTTL L +N L L + +T L +L+ LRL+DN
Sbjct: 206 QLQWVDRLAFHDLRRLTTLYLFNNSLTELAGECLTQLPALEYLRLNDN 253
Score = 108 (43.1 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 32/103 (31%), Positives = 48/103 (46%)
Query: 39 SLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAH-LSNLTTLDLSHNFLRA 97
+L + N I +E +F+ + L LDL NR + A H L L L L L A
Sbjct: 78 TLWIYSNNITYIEPSTFQGFTLLEELDLGDNRYLRSLSAETFHGLGRLHALHLYRCGLSA 137
Query: 98 LTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTLTLSG 140
L ++ L++LQ L L DN + + D+ D ++ L L G
Sbjct: 138 LPNNIFQGLRNLQYLYLQDNHLEYLQDDLFVDLHNLSHLFLHG 180
>MGI|MGI:1914123 [details] [associations]
symbol:Tril "TLR4 interactor with leucine-rich repeats"
species:10090 "Mus musculus" [GO:0001530 "lipopolysaccharide
binding" evidence=ISO] [GO:0002718 "regulation of cytokine
production involved in immune response" evidence=ISO] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0034142 "toll-like receptor 4 signaling pathway" evidence=ISO]
[GO:0045087 "innate immune response" evidence=IEA] [GO:0046696
"lipopolysaccharide receptor complex" evidence=ISO]
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1914123 GO:GO:0016021
GO:GO:0006954 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0045087 InterPro:IPR000372
SMART:SM00013 HSSP:Q9BZR6 GeneTree:ENSGT00700000104056 Pfam:PF01463
CTD:9865 HOVERGEN:HBG066060 EMBL:AK122338 EMBL:AK004681
EMBL:AK033401 EMBL:AK051421 EMBL:BC043099 EMBL:BC059224
IPI:IPI00469248 RefSeq:NP_080093.1 UniGene:Mm.422727
UniGene:Mm.475802 UniGene:Mm.480530 ProteinModelPortal:Q9DBY4
SMR:Q9DBY4 STRING:Q9DBY4 PRIDE:Q9DBY4 Ensembl:ENSMUST00000127748
GeneID:66873 KEGG:mmu:66873 UCSC:uc009bzk.2 OMA:EFPCDRF
OrthoDB:EOG4KWJSW NextBio:322893 Bgee:Q9DBY4 Genevestigator:Q9DBY4
Uniprot:Q9DBY4
Length = 809
Score = 139 (54.0 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 43/137 (31%), Positives = 63/137 (45%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T+ L L++L N+ + RG+ GL+ L L N + L D F L L +L
Sbjct: 126 TLAPLRKLRILYANGNEIGRLSRGSFEGLESLVKLRLDGNVLGALPDAVFAPLGNLLYLH 185
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLIT--PLKSLQELRLDDNDISMVT 123
L NRI + + + L L L+LS N L+ + T PL+SL L L N + +
Sbjct: 186 LESNRIRFLGKNAFSQLGKLRFLNLSANELQPSLRHAATFVPLRSLSTLILSANSLQHLG 245
Query: 124 PDVIGDNVTITTLTLSG 140
P V + L+LSG
Sbjct: 246 PRVFQHLPRLGLLSLSG 262
Score = 126 (49.4 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 39/114 (34%), Positives = 57/114 (50%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T +LS L+ L + +N ++ G LA L KL L + N+I L SF L +L L
Sbjct: 102 TFEKLSRLEELYLGNNLLQALVPGTLAPLRKLRILYANGNEIGRLSRGSFEGLESLVKLR 161
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
L N + A+ A A L NL L L N +R L ++ + L L+ L L N++
Sbjct: 162 LDGNVLGALPDAVFAPLGNLLYLHLESNRIRFLGKNAFSQLGKLRFLNLSANEL 215
Score = 124 (48.7 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 35/110 (31%), Positives = 53/110 (48%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
+ L L +LS++ NQ + + A GL+ L L N+++ L L +L LDL+
Sbjct: 250 QHLPRLGLLSLSGNQLTHLAPEAFWGLEALRELRLEGNRLNQLPLTLLEPLHSLEALDLS 309
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
N + A+ A+ H L L L N L AL+ D+ +L L LD N
Sbjct: 310 GNELSALHPATFGHQGRLRELSLRDNALSALSGDIFAASPALYRLDLDGN 359
Score = 119 (46.9 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 41/131 (31%), Positives = 57/131 (43%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L SL L ++ N + L +L LS NQ+ L +F L L L L N
Sbjct: 228 LRSLSTLILSANSLQHLGPRVFQHLPRLGLLSLSGNQLTHLAPEAFWGLEALRELRLEGN 287
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
R+ + L L +L LDLS N L AL L+EL L DN +S ++ D+
Sbjct: 288 RLNQLPLTLLEPLHSLEALDLSGNELSALHPATFGHQGRLRELSLRDNALSALSGDIFAA 347
Query: 130 NVTITTLTLSG 140
+ + L L G
Sbjct: 348 SPALYRLDLDG 358
Score = 112 (44.5 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 38/133 (28%), Positives = 64/133 (48%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHS--FRALSTLSHLDLA 67
L +L L + N+ + + A + L KL L+ N++ H+ F L +LS L L+
Sbjct: 178 LGNLLYLHLESNRIRFLGKNAFSQLGKLRFLNLSANELQPSLRHAATFVPLRSLSTLILS 237
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI 127
N + + HL L L LS N L L + L++L+ELRL+ N ++ + ++
Sbjct: 238 ANSLQHLGPRVFQHLPRLGLLSLSGNQLTHLAPEAFWGLEALRELRLEGNRLNQLPLTLL 297
Query: 128 GDNVTITTLTLSG 140
++ L LSG
Sbjct: 298 EPLHSLEALDLSG 310
Score = 108 (43.1 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 34/111 (30%), Positives = 54/111 (48%)
Query: 17 SIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSG 76
S+ N +++ L +L L +NQI L +F LS L L L +N + A+
Sbjct: 65 SLGGNFITNITAFDFHRLGQLRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQALVP 124
Query: 77 ASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI 127
+LA L L L + N + L++ L+SL +LRLD N + + PD +
Sbjct: 125 GTLAPLRKLRILYANGNEIGRLSRGSFEGLESLVKLRLDGNVLGAL-PDAV 174
Score = 103 (41.3 bits), Expect = 0.00018, P = 0.00018
Identities = 37/131 (28%), Positives = 53/131 (40%)
Query: 9 RLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 68
RL L+ L + +NQ S+ L +L L +N + L + L L L
Sbjct: 81 RLGQLRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQALVPGTLAPLRKLRILYANG 140
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
N I +S S L +L L L N L AL + PL +L L L+ N I + +
Sbjct: 141 NEIGRLSRGSFEGLESLVKLRLDGNVLGALPDAVFAPLGNLLYLHLESNRIRFLGKNAFS 200
Query: 129 DNVTITTLTLS 139
+ L LS
Sbjct: 201 QLGKLRFLNLS 211
>UNIPROTKB|E1BT96 [details] [associations]
symbol:E1BT96 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0030282 "bone mineralization" evidence=IEA] [GO:0030512
"negative regulation of transforming growth factor beta receptor
signaling pathway" evidence=IEA] [GO:0070171 "negative regulation
of tooth mineralization" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005578 InterPro:IPR003591 SMART:SM00369
GO:GO:0005509 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GeneTree:ENSGT00700000104006 GO:GO:0070171 GO:GO:0030512
EMBL:AADN02013901 IPI:IPI00602330 Ensembl:ENSGALT00000007519
OMA:NRNIREV Uniprot:E1BT96
Length = 571
Score = 137 (53.3 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 36/118 (30%), Positives = 63/118 (53%)
Query: 13 LKVLSIAHNQ--FSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
L+ +++++N+ F + G A L L L HHN++D + F S+L L L N+
Sbjct: 369 LREINLSYNKIKFHMLDHGVFAKLSNLVQLHLHHNELD---EFPFPLPSSLERLLLGFNK 425
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFL--RALTQDLITPLKSLQELRLDDNDISMVTPDV 126
I + G +L L+N+T LDL NFL L + + + +L +L L +N + + P++
Sbjct: 426 ISKLPGIALDGLANITMLDLCSNFLDDSVLKGNPFSAMNNLMQLNLCNNKLQTMPPNL 483
>UNIPROTKB|E1BG29 [details] [associations]
symbol:GP5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0010544 "negative regulation of platelet activation"
evidence=IEA] [GO:0007160 "cell-matrix adhesion" evidence=IEA]
[GO:0005518 "collagen binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007160
GO:GO:0010544 GeneTree:ENSGT00700000104286 OMA:AMIKIGQ
EMBL:DAAA02001732 EMBL:DAAA02001733 EMBL:DAAA02001734
EMBL:DAAA02001735 IPI:IPI00711271 Ensembl:ENSBTAT00000017571
NextBio:20873574 Uniprot:E1BG29
Length = 583
Score = 137 (53.3 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 40/120 (33%), Positives = 58/120 (48%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
L+ L + N+ +S+ G L L LT L H N + + +F L +LS L L+ NR+
Sbjct: 196 LQKLLLHSNRLASLESGLLDSLRALTELQLHTNHLRSIVPGAFDRLRSLSSLTLSENRLE 255
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVT 132
+ A H NLT L LS N L L + L + L+ELRL + + P N+T
Sbjct: 256 FLPSALFLHSHNLTFLTLSENPLEELPKVLFGEIGGLRELRLKSTQLRTL-PAAAFRNLT 314
Score = 120 (47.3 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 36/126 (28%), Positives = 58/126 (46%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
LK L ++ N+ + + L L L L N++ L+ + F+ L L L L N++
Sbjct: 100 LKTLRLSRNKITHLPSALLDNLVLLEQLFLDGNELKSLDQNLFQKLVHLQELFLNQNQLA 159
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVT 132
+ + HL NL LDLS N L L + L LQ+L L N ++ + ++
Sbjct: 160 FLPASLFTHLGNLKLLDLSGNNLTHLPEGLFGVQVKLQKLLLHSNRLASLESGLLDSLRA 219
Query: 133 ITTLTL 138
+T L L
Sbjct: 220 LTELQL 225
Score = 114 (45.2 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 28/86 (32%), Positives = 45/86 (52%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
R L L+VL+++ +S+ G L GL +L +S N++ L FR LS+L + L
Sbjct: 336 RGLGELQVLALSSTGLASLPAGLLRGLCRLRHVSLRSNRLRALPSALFRNLSSLEEVQLD 395
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHN 93
HN++ + G + L L + L HN
Sbjct: 396 HNQLETLPGDAFEALPRLAGVLLGHN 421
Score = 108 (43.1 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 32/120 (26%), Positives = 55/120 (45%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L +LK+L ++ N + + G KL L H N++ LE +L L+ L L N
Sbjct: 169 LGNLKLLDLSGNNLTHLPEGLFGVQVKLQKLLLHSNRLASLESGLLDSLRALTELQLHTN 228
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+ ++ + L +L++L LS N L L L +L L L +N + + + G+
Sbjct: 229 HLRSIVPGAFDRLRSLSSLTLSENRLEFLPSALFLHSHNLTFLTLSENPLEELPKVLFGE 288
Score = 107 (42.7 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 36/132 (27%), Positives = 56/132 (42%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
++L L+ L + NQ + + L L L N + L + F L L L
Sbjct: 143 QKLVHLQELFLNQNQLAFLPASLFTHLGNLKLLDLSGNNLTHLPEGLFGVQVKLQKLLLH 202
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI 127
NR+ ++ L L LT L L N LR++ L+SL L L +N + + +
Sbjct: 203 SNRLASLESGLLDSLRALTELQLHTNHLRSIVPGAFDRLRSLSSLTLSENRLEFLPSALF 262
Query: 128 GDNVTITTLTLS 139
+ +T LTLS
Sbjct: 263 LHSHNLTFLTLS 274
Score = 106 (42.4 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 35/127 (27%), Positives = 56/127 (44%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
L+ L + N+ S+ + L L L + NQ+ L F L L LDL+ N +
Sbjct: 124 LEQLFLDGNELKSLDQNLFQKLVHLQELFLNQNQLAFLPASLFTHLGNLKLLDLSGNNLT 183
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVT 132
+ L L L N L +L L+ L++L EL+L N + + P +
Sbjct: 184 HLPEGLFGVQVKLQKLLLHSNRLASLESGLLDSLRALTELQLHTNHLRSIVPGAFDRLRS 243
Query: 133 ITTLTLS 139
+++LTLS
Sbjct: 244 LSSLTLS 250
Score = 103 (41.3 bits), Expect = 0.00012, P = 0.00012
Identities = 32/117 (27%), Positives = 52/117 (44%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN-QIDVLEDHSFRALSTLSHLDLAH 68
+ L+ L + Q ++ A L L L + ++ L + +FR L L L L+
Sbjct: 289 IGGLRELRLKSTQLRTLPAAAFRNLTGLRVLEVSLSPRLSALPEDAFRGLGELQVLALSS 348
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
+ ++ L L L + L N LRAL L L SL+E++LD N + + D
Sbjct: 349 TGLASLPAGLLRGLCRLRHVSLRSNRLRALPSALFRNLSSLEEVQLDHNQLETLPGD 405
>RGD|1563357 [details] [associations]
symbol:Tlr7 "toll-like receptor 7" species:10116 "Rattus
norvegicus" [GO:0002224 "toll-like receptor signaling pathway"
evidence=IDA] [GO:0002282 "microglial cell activation involved in
immune response" evidence=IDA] [GO:0002755 "MyD88-dependent
toll-like receptor signaling pathway" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA;ISO] [GO:0003727
"single-stranded RNA binding" evidence=IC;ISO] [GO:0004888
"transmembrane signaling receptor activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005764 "lysosome"
evidence=IEA;ISO] [GO:0005768 "endosome" evidence=IEA;ISO]
[GO:0005783 "endoplasmic reticulum" evidence=IEA;ISO] [GO:0005886
"plasma membrane" evidence=IEA;ISO] [GO:0007252 "I-kappaB
phosphorylation" evidence=IEA;ISO] [GO:0008144 "drug binding"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0032009 "early phagosome" evidence=IEA;ISO] [GO:0032722
"positive regulation of chemokine production" evidence=IEA;ISO]
[GO:0032755 "positive regulation of interleukin-6 production"
evidence=IEA;ISO] [GO:0032757 "positive regulation of interleukin-8
production" evidence=IEA;ISO] [GO:0034154 "toll-like receptor 7
signaling pathway" evidence=IEA;ISO] [GO:0035197 "siRNA binding"
evidence=IEA;ISO] [GO:0042221 "response to chemical stimulus"
evidence=IDA] [GO:0042346 "positive regulation of NF-kappaB import
into nucleus" evidence=IEA;ISO] [GO:0045078 "positive regulation of
interferon-gamma biosynthetic process" evidence=IEA;ISO]
[GO:0045356 "positive regulation of interferon-alpha biosynthetic
process" evidence=IEA;ISO] [GO:0045359 "positive regulation of
interferon-beta biosynthetic process" evidence=IEA;ISO] [GO:0045416
"positive regulation of interleukin-8 biosynthetic process"
evidence=IEA;ISO] [GO:0051607 "defense response to virus"
evidence=IEA;ISO] [GO:0052033 "pathogen-associated molecular
pattern dependent induction by symbiont of host innate immune
response" evidence=IDA] [GO:0071260 "cellular response to
mechanical stimulus" evidence=IEA;ISO] Pfam:PF00560
InterPro:IPR000157 InterPro:IPR001611 InterPro:IPR026880
Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450 RGD:1563357
GO:GO:0005783 GO:GO:0016021 GO:GO:0005886 GO:GO:0008144
GO:GO:0005768 GO:GO:0003727 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0045087 GO:GO:0032722
GO:GO:0032755 GO:GO:0042221 GO:GO:0005764 GO:GO:0051607
GO:GO:0032009 GO:GO:0003725 GO:GO:0032757 GO:GO:0071260
GO:GO:0035197 InterPro:IPR000372 SMART:SM00013 GO:GO:0004888
GO:GO:0045416 GO:GO:0002224 GO:GO:0052033 GO:GO:0042346
GO:GO:0045078 GO:GO:0002282 GO:GO:0007252 SUPFAM:SSF52200
GO:GO:0034154 GO:GO:0045359 GeneTree:ENSGT00680000099674
GO:GO:0045356 CTD:51284 HOGENOM:HOG000230468 HOVERGEN:HBG018601
KO:K05404 OrthoDB:EOG4BCDM5 PANTHER:PTHR24365:SF1 EMBL:EF032637
IPI:IPI00206788 RefSeq:NP_001091051.1 UniGene:Rn.14819
STRING:A5H2Z9 Ensembl:ENSRNOT00000005620 GeneID:317468
KEGG:rno:317468 eggNOG:KOG4641 InParanoid:A5H2Z9 NextBio:671850
Genevestigator:A5H2Z9 Uniprot:A5H2Z9
Length = 1050
Score = 140 (54.3 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 41/126 (32%), Positives = 65/126 (51%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLD-KLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
+ L +L+ L I+ N +SV G G+ LT+LS N + + L L +LDL
Sbjct: 648 KNLLNLEELDISRNSLNSVPPGVFEGMPPNLTTLSLAKNGLRSFSWGRLQLLKHLKNLDL 707
Query: 67 AHNRIVAVSGASLAHLS-NLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
+HN++ V A LA+ S +LT L L+HN +R LT+ + L+ L + N I ++
Sbjct: 708 SHNQLTTVP-ARLANCSKSLTKLILNHNQIRQLTKYFLEDALQLRYLDISSNKIQVIQKT 766
Query: 126 VIGDNV 131
+NV
Sbjct: 767 SFPENV 772
Score = 117 (46.2 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 35/96 (36%), Positives = 49/96 (51%)
Query: 4 WCTVRRLSSLKVLSIAHNQFSSVRRGALAGLDK-LTSLSCHHNQIDVLEDHSFRALSTLS 62
W ++ L LK L ++HNQ ++V LA K LT L +HNQI L + L
Sbjct: 693 WGRLQLLKHLKNLDLSHNQLTTVP-ARLANCSKSLTKLILNHNQIRQLTKYFLEDALQLR 751
Query: 63 HLDLAHNRIVAVSGASLAH--LSNLTTLDLSHN-FL 95
+LD++ N+I + S L+NL L L HN FL
Sbjct: 752 YLDISSNKIQVIQKTSFPENVLNNLNMLLLHHNRFL 787
Score = 104 (41.7 bits), Expect = 0.00019, P = 0.00019
Identities = 35/114 (30%), Positives = 55/114 (48%)
Query: 14 KVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI-DVLEDHSFRALSTLSHLDLAHNRIV 72
K L ++ N ++ L L L+ N I L + L L +LD ++NR+
Sbjct: 497 KTLDLSRNNIFFIKPSDFKHLSFLKCLNLSGNAIGQTLNGSELQPLRELRYLDFSNNRLD 556
Query: 73 AVSGASLAHLSNLTTLDLSHN--FLRA--LTQDL-ITP-LKSLQELRLDDNDIS 120
+ + L NL LDLS N + +A +T L T L+ L++L ++DNDIS
Sbjct: 557 LLYSTAFEELQNLEILDLSSNSHYFQAEGITHMLNFTKKLRHLEKLMMNDNDIS 610
>ZFIN|ZDB-GENE-091214-3 [details] [associations]
symbol:lingo4b "leucine rich repeat and Ig domain
containing 4b" species:7955 "Danio rerio" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-091214-3 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR003591 SMART:SM00369 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR025875
Pfam:PF12799 HOVERGEN:HBG057546 EMBL:BC171652 IPI:IPI00612243
UniGene:Dr.74856 ProteinModelPortal:B7ZVN7 eggNOG:NOG299566
OMA:IVESEYA OrthoDB:EOG4NZTT6 Uniprot:B7ZVN7
Length = 604
Score = 137 (53.3 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 35/117 (29%), Positives = 61/117 (52%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T + L +L+ L I +N+ + G +GL L L N+I V D++FR + L LD
Sbjct: 101 TFQGLKNLRYLRIKNNRLKILPVGVFSGLSNLRRLDISENEILVFLDYTFRDMINLQQLD 160
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
N +V +S + L L L++ + L ++ + ++ L+SL +LRL IS++
Sbjct: 161 AGENDLVFISQRAFVGLQALKELNVDRSNLTSIPTEALSQLQSLTKLRLRKLTISVL 217
Score = 137 (53.3 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 35/129 (27%), Positives = 63/129 (48%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
LS L+ L ++ N S + GL L L +N++ +L F LS L LD++ N
Sbjct: 81 LSKLEDLDLSENIISMIEVETFQGLKNLRYLRIKNNRLKILPVGVFSGLSNLRRLDISEN 140
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
I+ + + NL LD N L ++Q L++L+EL +D ++++ + + +
Sbjct: 141 EILVFLDYTFRDMINLQQLDAGENDLVFISQRAFVGLQALKELNVDRSNLTSIPTEALSQ 200
Query: 130 NVTITTLTL 138
++T L L
Sbjct: 201 LQSLTKLRL 209
Score = 137 (53.3 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 43/132 (32%), Positives = 69/132 (52%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH- 68
L +LK L++ + +S+ AL+ L LT L I VL +++FR L L L + H
Sbjct: 177 LQALKELNVDRSNLTSIPTEALSQLQSLTKLRLRKLTISVLPNNAFRRLHQLRTLQILHW 236
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
+ + ++ SL L NLTTL L++ L A+ + L LQ L L N I+ + +++G
Sbjct: 237 SSLEMLNSNSLVGL-NLTTLVLTNCNLSAIPYSPLRHLAYLQYLDLSYNPITSIQGNLLG 295
Query: 129 DNVTITTLTLSG 140
D + + L L G
Sbjct: 296 DLLRLQELHLVG 307
Score = 131 (51.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 31/113 (27%), Positives = 57/113 (50%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
++ K L ++ NQ ++ R + L KL L N I ++E +F+ L L +L + +NR
Sbjct: 58 TNAKRLDLSGNQLKTLARRQFSSLSKLEDLDLSENIISMIEVETFQGLKNLRYLRIKNNR 117
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVT 123
+ + + LSNL LD+S N + + +LQ+L +ND+ ++
Sbjct: 118 LKILPVGVFSGLSNLRRLDISENEILVFLDYTFRDMINLQQLDAGENDLVFIS 170
Score = 107 (42.7 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 34/117 (29%), Positives = 60/117 (51%)
Query: 9 RLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSC-HHNQIDVLEDHSFRALSTLSHLDLA 67
+L SL L + S + A L +L +L H + +++L +S L+ L+ L L
Sbjct: 200 QLQSLTKLRLRKLTISVLPNNAFRRLHQLRTLQILHWSSLEMLNSNSLVGLN-LTTLVLT 258
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTP 124
+ + A+ + L HL+ L LDLS+N + ++ +L+ L LQEL L ++ + P
Sbjct: 259 NCNLSAIPYSPLRHLAYLQYLDLSYNPITSIQGNLLGDLLRLQELHLVGGNLLQIEP 315
Score = 102 (41.0 bits), Expect = 0.00032, P = 0.00032
Identities = 35/132 (26%), Positives = 56/132 (42%)
Query: 8 RRLSSLKVLSIAH-NQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
RRL L+ L I H + + +L GL+ LT+L + + + R L+ L +LDL
Sbjct: 223 RRLHQLRTLQILHWSSLEMLNSNSLVGLN-LTTLVLTNCNLSAIPYSPLRHLAYLQYLDL 281
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDV 126
++N I ++ G L L L L L L + L + L + N +S +
Sbjct: 282 SYNPITSIQGNLLGDLLRLQELHLVGGNLLQIEPGAFRGLSRFRLLNVSSNRLSTLEESA 341
Query: 127 IGDNVTITTLTL 138
+ TL L
Sbjct: 342 FHSVGNLQTLRL 353
Score = 101 (40.6 bits), Expect = 0.00082, P = 0.00082
Identities = 28/97 (28%), Positives = 47/97 (48%)
Query: 45 NQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLIT 104
NQ+ L F +LS L LDL+ N I + + L NL L + +N L+ L + +
Sbjct: 68 NQLKTLARRQFSSLSKLEDLDLSENIISMIEVETFQGLKNLRYLRIKNNRLKILPVGVFS 127
Query: 105 PLKSLQELRLDDNDISMVTPDVIGDNVTITTLTLSGE 141
L +L+ L + +N+I + D + + L +GE
Sbjct: 128 GLSNLRRLDISENEILVFLDYTFRDMINLQQLD-AGE 163
>UNIPROTKB|Q8IWK6 [details] [associations]
symbol:GPR125 "Probable G-protein coupled receptor 125"
species:9606 "Homo sapiens" [GO:0007218 "neuropeptide signaling
pathway" evidence=IEA] [GO:0004930 "G-protein coupled receptor
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0009897 "external side of plasma membrane"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=TAS] InterPro:IPR001611 InterPro:IPR000203
InterPro:IPR000832 InterPro:IPR001879 InterPro:IPR007110
InterPro:IPR017981 Pfam:PF00002 Pfam:PF01825 Pfam:PF02793
PROSITE:PS00649 PROSITE:PS00650 PROSITE:PS50221 PROSITE:PS50227
PROSITE:PS50261 PROSITE:PS50835 PROSITE:PS51450 SMART:SM00303
GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0009897
GO:GO:0004930 GO:GO:0007218 InterPro:IPR003599 SMART:SM00409
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 eggNOG:NOG307919 HOVERGEN:HBG051777
HOGENOM:HOG000112767 EMBL:AY181243 EMBL:AY358306 EMBL:AC093735
EMBL:AC093814 EMBL:BC026009 EMBL:BC035645 IPI:IPI00452590
IPI:IPI00452591 IPI:IPI00452592 IPI:IPI00452593 RefSeq:NP_660333.2
UniGene:Hs.99195 ProteinModelPortal:Q8IWK6 SMR:Q8IWK6 STRING:Q8IWK6
MEROPS:S63.021 PhosphoSite:Q8IWK6 DMDM:50400542 PaxDb:Q8IWK6
PRIDE:Q8IWK6 DNASU:166647 Ensembl:ENST00000334304
Ensembl:ENST00000502482 Ensembl:ENST00000508133 GeneID:166647
KEGG:hsa:166647 UCSC:uc003gqm.1 UCSC:uc003gqn.1 UCSC:uc003gqo.3
UCSC:uc010ieo.1 CTD:166647 GeneCards:GC04M022346 HGNC:HGNC:13839
HPA:HPA008904 MIM:612303 neXtProt:NX_Q8IWK6 PharmGKB:PA134919579
InParanoid:Q8IWK6 KO:K08462 OMA:HHIPVNV OrthoDB:EOG42820R
ChiTaRS:GPR125 GenomeRNAi:166647 NextBio:88603 ArrayExpress:Q8IWK6
Bgee:Q8IWK6 CleanEx:HS_GPR125 Genevestigator:Q8IWK6
GermOnline:ENSG00000152990 Uniprot:Q8IWK6
Length = 1321
Score = 141 (54.7 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 40/124 (32%), Positives = 67/124 (54%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
L +++N+ S ++ G+ +GL L L +N I ++ +F LS+L LDL +NRI ++
Sbjct: 86 LILSNNKISELKNGSFSGLSLLERLDLRNNLISSIDPGAFWGLSSLKRLDLTNNRIGCLN 145
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQ---DLITPLKSLQ---ELRLDDNDISMVTPDVIGD 129
L+NL L+LS N +L+Q D + L+SL+ E L D +I + V
Sbjct: 146 ADIFRGLTNLVRLNLSGNLFSSLSQGTFDYLASLRSLEFQTEYLLCDCNILWMHRWVKEK 205
Query: 130 NVTI 133
N+T+
Sbjct: 206 NITV 209
Score = 113 (44.8 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 29/89 (32%), Positives = 48/89 (53%)
Query: 35 DKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNF 94
++ +L +N+I L++ SF LS L LDL +N I ++ + LS+L LDL++N
Sbjct: 81 NRTVTLILSNNKISELKNGSFSGLSLLERLDLRNNLISSIDPGAFWGLSSLKRLDLTNNR 140
Query: 95 LRALTQDLITPLKSLQELRLDDNDISMVT 123
+ L D+ L +L L L N S ++
Sbjct: 141 IGCLNADIFRGLTNLVRLNLSGNLFSSLS 169
Score = 108 (43.1 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 28/86 (32%), Positives = 46/86 (53%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
LS L+ L + +N SS+ GA GL L L +N+I L FR L+ L L+L+ N
Sbjct: 104 LSLLERLDLRNNLISSIDPGAFWGLSSLKRLDLTNNRIGCLNADIFRGLTNLVRLNLSGN 163
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFL 95
++S + +L++L +L+ +L
Sbjct: 164 LFSSLSQGTFDYLASLRSLEFQTEYL 189
>UNIPROTKB|Q3BBY1 [details] [associations]
symbol:Q3BBY1 "Toll-like receptor 3" species:9544 "Macaca
mulatta" [GO:0003725 "double-stranded RNA binding" evidence=ISS]
[GO:0045078 "positive regulation of interferon-gamma biosynthetic
process" evidence=ISS] [GO:0045356 "positive regulation of
interferon-alpha biosynthetic process" evidence=ISS] [GO:0045359
"positive regulation of interferon-beta biosynthetic process"
evidence=ISS] InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 GO:GO:0016021 GO:GO:0007165 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005622
GO:GO:0003725 InterPro:IPR000372 SMART:SM00013 GO:GO:0045078
SUPFAM:SSF52200 GO:GO:0045359 CTD:7098 HOVERGEN:HBG023181 KO:K05401
PANTHER:PTHR24365:SF5 GO:GO:0045356 EMBL:AY864735
RefSeq:NP_001031762.1 UniGene:Mmu.3813 ProteinModelPortal:Q3BBY1
SMR:Q3BBY1 STRING:Q3BBY1 GeneID:574378 KEGG:mcc:574378
InParanoid:Q3BBY1 NextBio:19964208 Uniprot:Q3BBY1
Length = 904
Score = 139 (54.0 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 41/134 (30%), Positives = 62/134 (46%)
Query: 9 RLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHL-DLA 67
R S L +L + N S L L L+ HN++ L D +F L+ L L+
Sbjct: 73 RYSQLTILDVGFNSISKPEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCMNLTELHSLS 132
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI 127
H+ I + NL TLDLSHN L ++ +++LQEL L +N I + + +
Sbjct: 133 HS-IQKIKNNPFVKQKNLITLDLSHNGLSSIKLGTQVQMENLQELLLSNNKIQALKSEEL 191
Query: 128 G--DNVTITTLTLS 139
G N ++ L LS
Sbjct: 192 GILANSSLKKLELS 205
Score = 133 (51.9 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 37/119 (31%), Positives = 63/119 (52%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
++L LKVL++ HN+ S + A LT L + I ++++ F L LDL+
Sbjct: 96 QKLPMLKVLNLQHNELSQLSDKTFAFCMNLTELHSLSHSIQKIKNNPFVKQKNLITLDLS 155
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRAL-TQDL-ITPLKSLQELRLDDNDISMVTP 124
HN + ++ + + NL L LS+N ++AL +++L I SL++L L N I +P
Sbjct: 156 HNGLSSIKLGTQVQMENLQELLLSNNKIQALKSEELGILANSSLKKLELSSNQIKEFSP 214
Score = 119 (46.9 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 39/140 (27%), Positives = 67/140 (47%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLD--KLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 68
+S++ LS++++Q S+ GL LT L HN ++V+ + SF L L + L +
Sbjct: 248 TSVRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSHNNLNVVGNDSFAWLPQLEYFFLEY 307
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITP---------LKSLQELRLDDNDI 119
N I + SL L N+ L+L +F + P L L+ L ++DNDI
Sbjct: 308 NNIQHLLSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFRWLTCLEHLNMEDNDI 367
Query: 120 SMVTPDVIGDNVTITTLTLS 139
S + ++ + + L+LS
Sbjct: 368 SGIKSNMFTGLINLKYLSLS 387
Score = 111 (44.1 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 37/127 (29%), Positives = 55/127 (43%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHS--------FRALSTL 61
L +L +L +++N +++ L GL+KL L HN + L H+ + LS L
Sbjct: 505 LGNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPVYFLKGLSHL 564
Query: 62 SHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISM 121
L+L N + LS L +DL N L L + SL+ L L N I+
Sbjct: 565 HILNLESNGFDEIPVEVFKDLSELKIIDLGLNNLNTLPASVFDNQVSLKSLNLQKNLITS 624
Query: 122 VTPDVIG 128
V V G
Sbjct: 625 VEKKVFG 631
Score = 105 (42.0 bits), Expect = 0.00013, P = 0.00013
Identities = 32/113 (28%), Positives = 52/113 (46%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
+++ VL++ HNQ + +LT L N I E + L L L+L HN
Sbjct: 51 TNITVLNLTHNQLRRLPAANFTRYSQLTILDVGFNSISKPEPELCQKLPMLKVLNLQHNE 110
Query: 71 IVAVSGASLAHLSNLTTL-DLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
+ +S + A NLT L LSH+ ++ + + K+L L L N +S +
Sbjct: 111 LSQLSDKTFAFCMNLTELHSLSHS-IQKIKNNPFVKQKNLITLDLSHNGLSSI 162
>FB|FBgn0052055 [details] [associations]
symbol:CG32055 species:7227 "Drosophila melanogaster"
[GO:0016942 "insulin-like growth factor binding protein complex"
evidence=ISS] [GO:0005520 "insulin-like growth factor binding"
evidence=ISS] InterPro:IPR001611 PROSITE:PS51450 EMBL:AE014296
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
GeneTree:ENSGT00690000101816 HSSP:Q9BZR6 InterPro:IPR026906
Pfam:PF13306 RefSeq:NP_729599.1 UniGene:Dm.27841
ProteinModelPortal:Q9VT89 SMR:Q9VT89 IntAct:Q9VT89 MINT:MINT-901114
EnsemblMetazoa:FBtr0076304 GeneID:39188 KEGG:dme:Dmel_CG32055
UCSC:CG32055-RA FlyBase:FBgn0052055 InParanoid:Q9VT89 OMA:LHSNWLE
OrthoDB:EOG4XD26B PhylomeDB:Q9VT89 GenomeRNAi:39188 NextBio:812398
ArrayExpress:Q9VT89 Bgee:Q9VT89 Uniprot:Q9VT89
Length = 534
Score = 136 (52.9 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 43/132 (32%), Positives = 66/132 (50%)
Query: 2 SIWCTVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTL 61
S++C RL L+ L++ NQ + + A GL L +L N+I +L D F L+ L
Sbjct: 284 SVFC---RLKKLRTLNLWLNQINRIHPRAFLGLSSLQTLHLQGNKISILPDDVFANLTAL 340
Query: 62 SHLDLAHNRI----VAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
LDL+ N I + V G + L L LDLS+N++ L ++ + ++ELRL N
Sbjct: 341 EKLDLSKNNIQKLGLRVFGERI--LRKLIYLDLSNNYIADLHPLALSSMPFIKELRLRRN 398
Query: 118 -----DISMVTP 124
D+ M P
Sbjct: 399 RLVSLDLRMFAP 410
Score = 121 (47.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 37/125 (29%), Positives = 62/125 (49%)
Query: 10 LSSLKVLSIAHNQFSSVRRG---ALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
L +L+VL++++N ++R A + L L N + VL+D F L L L+L
Sbjct: 238 LPNLRVLNVSNNNLFEIKRTLFMAPGEIAPLELLDYSSNIVKVLDDSVFCRLKKLRTLNL 297
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDV 126
N+I + + LS+L TL L N + L D+ L +L++L L N+I + V
Sbjct: 298 WLNQINRIHPRAFLGLSSLQTLHLQGNKISILPDDVFANLTALEKLDLSKNNIQKLGLRV 357
Query: 127 IGDNV 131
G+ +
Sbjct: 358 FGERI 362
Score = 119 (46.9 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 38/139 (27%), Positives = 60/139 (43%)
Query: 4 WCTVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRA---LST 60
WC +R L L+ L + N + G L L L+ +N + ++ F A ++
Sbjct: 208 WCHLRVLPKLEELHLHSNWLEHLDMGIFYALPNLRVLNVSNNNLFEIKRTLFMAPGEIAP 267
Query: 61 LSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
L LD + N + + + L L TL+L N + + L SLQ L L N IS
Sbjct: 268 LELLDYSSNIVKVLDDSVFCRLKKLRTLNLWLNQINRIHPRAFLGLSSLQTLHLQGNKIS 327
Query: 121 MVTPDVIGDNVTITTLTLS 139
++ DV + + L LS
Sbjct: 328 ILPDDVFANLTALEKLDLS 346
Score = 117 (46.2 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 38/138 (27%), Positives = 64/138 (46%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T+ ++L+ LSI++N + L L KL L H N ++ L+ F AL L L+
Sbjct: 186 TLGENANLRFLSISNNNLRDFQWCHLRVLPKLEELHLHSNWLEHLDMGIFYALPNLRVLN 245
Query: 66 LAHNRIVAVSGASL---AHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
+++N + + ++ L LD S N ++ L + LK L+ L L N I+ +
Sbjct: 246 VSNNNLFEIKRTLFMAPGEIAPLELLDYSSNIVKVLDDSVFCRLKKLRTLNLWLNQINRI 305
Query: 123 TPDVIGDNVTITTLTLSG 140
P ++ TL L G
Sbjct: 306 HPRAFLGLSSLQTLHLQG 323
Score = 114 (45.2 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 35/120 (29%), Positives = 58/120 (48%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSF--RALSTLSHLDLA 67
LSSL+ L + N+ S + A L L L N I L F R L L +LDL+
Sbjct: 313 LSSLQTLHLQGNKISILPDDVFANLTALEKLDLSKNNIQKLGLRVFGERILRKLIYLDLS 372
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI 127
+N I + +L+ + + L L N L +L + PL+ LQ L +++N + + +++
Sbjct: 373 NNYIADLHPLALSSMPFIKELRLRRNRLVSLDLRMFAPLRQLQLLTINENRLEEIDGEIL 432
Score = 110 (43.8 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 31/130 (23%), Positives = 63/130 (48%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
LS+L L ++ + ++ L L L+ H Q+D L+ F S + + D+++N
Sbjct: 73 LSTLLQLDLSESGGVTLGEKGLQDFKALQKLNLTHAQLDELKSEQFPNPSEMINFDVSYN 132
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
I+A++ ++ NL + S N + + + +K+L+ L L N +T +G+
Sbjct: 133 DILAITTKLMSGFGNLVYANFSENLIAVIEPNAFRHMKNLRFLDLTTNYQENIT---LGE 189
Query: 130 NVTITTLTLS 139
N + L++S
Sbjct: 190 NANLRFLSIS 199
>UNIPROTKB|G5E9B3 [details] [associations]
symbol:LGR4 "Leucine-rich repeat-containing G
protein-coupled receptor 4, isoform CRA_a" species:9606 "Homo
sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 EMBL:CH471064
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 EMBL:AC090597 UniGene:Hs.502176
HGNC:HGNC:13299 ChiTaRS:LGR4 EMBL:AC100771
ProteinModelPortal:G5E9B3 SMR:G5E9B3 Ensembl:ENST00000389858
ArrayExpress:G5E9B3 Bgee:G5E9B3 Uniprot:G5E9B3
Length = 927
Score = 139 (54.0 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 42/130 (32%), Positives = 61/130 (46%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L LKVL++ +NQ +V A+ GL L SL N I + + SF L L HL L N
Sbjct: 80 LKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDN 139
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+ V L++L L L L+ N + ++ T L SL L L +N I ++
Sbjct: 140 SLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIRSLSQHCFDG 199
Query: 130 NVTITTLTLS 139
+ TL L+
Sbjct: 200 LDNLETLDLN 209
Score = 136 (52.9 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 43/129 (33%), Positives = 64/129 (49%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L+ L + N + V L+ L L +L+ N+I + D +F LS+L L L +N
Sbjct: 128 LVQLRHLWLDDNSLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNN 187
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+I ++S L NL TLDL++N L Q I L SL+EL N IS++
Sbjct: 188 KIRSLSQHCFDGLDNLETLDLNYNNLGEFPQ-AIKALPSLKELGFHSNSISVIPDGAFDG 246
Query: 130 NVTITTLTL 138
N + T+ L
Sbjct: 247 NPLLRTIHL 255
Score = 133 (51.9 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 36/113 (31%), Positives = 60/113 (53%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
+R LS+L+ L + N +SV + GL +L L N + + H L TL L L
Sbjct: 101 IRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPVHPLSNLPTLQALTL 160
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
A N+I ++ + +LS+L L L +N +R+L+Q L +L+ L L+ N++
Sbjct: 161 ALNKISSIPDFAFTNLSSLVVLHLHNNKIRSLSQHCFDGLDNLETLDLNYNNL 213
Score = 124 (48.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 39/119 (32%), Positives = 57/119 (47%)
Query: 14 KVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVA 73
+ L +A N S + AL+GL +L L+ +NQ+ + + R LS L L L N I +
Sbjct: 60 QALQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITS 119
Query: 74 VSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVT 132
V S L L L L N L + ++ L +LQ L L N IS + PD N++
Sbjct: 120 VPEDSFEGLVQLRHLWLDDNSLTEVPVHPLSNLPTLQALTLALNKISSI-PDFAFTNLS 177
Score = 117 (46.2 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 37/131 (28%), Positives = 57/131 (43%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L +L+ L++A N+ SS+ A L L L H+N+I L H F L L LDL +N
Sbjct: 152 LPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIRSLSQHCFDGLDNLETLDLNYN 211
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+ A A L +L L N + + L+ + L DN +S V +
Sbjct: 212 NLGEFPQAIKA-LPSLKELGFHSNSISVIPDGAFDGNPLLRTIHLYDNPLSFVGNSAFHN 270
Query: 130 NVTITTLTLSG 140
+ +L + G
Sbjct: 271 LSDLHSLVIRG 281
Score = 103 (41.3 bits), Expect = 0.00021, P = 0.00021
Identities = 30/108 (27%), Positives = 51/108 (47%)
Query: 33 GLDKLT-SLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLS 91
GL T +L N + + + L L L L +N++ V ++ LS L +L L
Sbjct: 54 GLSAFTQALQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLD 113
Query: 92 HNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTLTLS 139
N + ++ +D L L+ L LDDN ++ V + + T+ LTL+
Sbjct: 114 ANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPVHPLSNLPTLQALTLA 161
Score = 102 (41.0 bits), Expect = 0.00054, P = 0.00054
Identities = 30/105 (28%), Positives = 52/105 (49%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
L+ L +++N + + G L +S NQI +++ +F+ L +L LDL+ N I
Sbjct: 321 LRTLDLSYNNIRDLP--SFNGCHALEEISLQRNQIYQIKEGTFQGLISLRILDLSRNLIH 378
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
+ + A L +T LD+S N L + + L L +L+L N
Sbjct: 379 EIHSRAFATLGPITNLDVSFNELTSFPTE---GLNGLNQLKLVGN 420
>UNIPROTKB|F1Q0H5 [details] [associations]
symbol:TLR5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0050707 "regulation of cytokine secretion" evidence=IEA]
[GO:0045087 "innate immune response" evidence=IEA] [GO:0042742
"defense response to bacterium" evidence=IEA] [GO:0034146
"toll-like receptor 5 signaling pathway" evidence=IEA] [GO:0004888
"transmembrane signaling receptor activity" evidence=IEA]
[GO:0002755 "MyD88-dependent toll-like receptor signaling pathway"
evidence=IEA] [GO:0001819 "positive regulation of cytokine
production" evidence=IEA] InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR001010 InterPro:IPR027176 Pfam:PF01582 PROSITE:PS00271
PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255 GO:GO:0016021
GO:GO:0007165 GO:GO:0006952 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005622
GeneTree:ENSGT00700000104185 SUPFAM:SSF52200 PANTHER:PTHR24365:SF7
EMBL:AAEX03018516 EMBL:AAEX03018517 Ensembl:ENSCAFT00000018059
Uniprot:F1Q0H5
Length = 1422
Score = 141 (54.7 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 35/114 (30%), Positives = 58/114 (50%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L LK+L +AHN+ + + A GL + L+ HN + L D F L+ ++++DL HN
Sbjct: 546 LGDLKLLDLAHNKINRIAGEAFHGLGSVQVLNLSHNLLGELYDSDFSGLAEVAYIDLQHN 605
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVT 123
I + + L L TLDL N L+ ++ P S+ + L +N + V+
Sbjct: 606 HIGIIQDQTFRFLGALRTLDLRDNALKTVS---FVP--SIDTIFLGNNKLETVS 654
Score = 109 (43.4 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 29/113 (25%), Positives = 54/113 (47%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
SS+ L ++H S+ L L L HN+I+ + +F L ++ L+L+HN
Sbjct: 523 SSVLRLDLSHGFVFSLNARLFEVLGDLKLLDLAHNKINRIAGEAFHGLGSVQVLNLSHNL 582
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVT 123
+ + + + L+ + +DL HN + + L +L+ L L DN + V+
Sbjct: 583 LGELYDSDFSGLAEVAYIDLQHNHIGIIQDQTFRFLGALRTLDLRDNALKTVS 635
Score = 108 (43.1 bits), Expect = 0.00010, P = 0.00010
Identities = 38/123 (30%), Positives = 60/123 (48%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSL---SCHHNQIDVLEDHSFRALSTLSHL 64
R L +L+ L + +++ + A GL L L +C + + VL D FR L L L
Sbjct: 327 RNLPNLRTLDLGNSRVDFLHPDAFQGLPHLQELRLFACGLSDV-VLTDGYFRNLGALLRL 385
Query: 65 DLAHNRIVAVS-GASLAHLSNLTTLDLSHNFLRALTQDLITPL--KSLQELRLDDNDISM 121
DL+ N+I ++ AS L +L ++D S N + A + + PL K+L L L N +
Sbjct: 386 DLSKNQIGSLELHASFRELGSLRSVDFSLNRIPAACEQGLRPLQGKALSLLNLAANGLYS 445
Query: 122 VTP 124
P
Sbjct: 446 RAP 448
>UNIPROTKB|Q9BXB1 [details] [associations]
symbol:LGR4 "Leucine-rich repeat-containing G-protein
coupled receptor 4" species:9606 "Homo sapiens" [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030539 "male genitalia
development" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0050673 "epithelial cell proliferation" evidence=IEA]
[GO:0061290 "canonical Wnt receptor signaling pathway involved in
metanephric kidney development" evidence=IEA] [GO:0072202 "cell
differentiation involved in metanephros development" evidence=IEA]
[GO:0072224 "metanephric glomerulus development" evidence=IEA]
[GO:0072282 "metanephric nephron tubule morphogenesis"
evidence=IEA] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0004930 "G-protein coupled
receptor activity" evidence=TAS] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 InterPro:IPR017452
Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373 PROSITE:PS00237
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886
GO:GO:0045892 GO:GO:0045893 EMBL:CH471064 GO:GO:0004930
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030539
GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 GO:GO:0061290 GO:GO:0072282
EMBL:AF346711 EMBL:AF346709 EMBL:AF346710 EMBL:AF257182
EMBL:AC090597 IPI:IPI00217954 RefSeq:NP_060960.2 UniGene:Hs.502176
ProteinModelPortal:Q9BXB1 SMR:Q9BXB1 DIP:DIP-59894N STRING:Q9BXB1
PhosphoSite:Q9BXB1 DMDM:212286375 PaxDb:Q9BXB1 PRIDE:Q9BXB1
DNASU:55366 Ensembl:ENST00000379214 GeneID:55366 KEGG:hsa:55366
UCSC:uc001mrj.4 CTD:55366 GeneCards:GC11M027345 H-InvDB:HIX0009517
HGNC:HGNC:13299 HPA:HPA030267 MIM:606666 neXtProt:NX_Q9BXB1
PharmGKB:PA28893 HOVERGEN:HBG031675 InParanoid:Q9BXB1 KO:K04309
OMA:DGYWSDC OrthoDB:EOG476JZH ChiTaRS:LGR4 GenomeRNAi:55366
NextBio:59753 ArrayExpress:Q9BXB1 Bgee:Q9BXB1 CleanEx:HS_LGR4
Genevestigator:Q9BXB1 GermOnline:ENSG00000205213 GO:GO:0072202
GO:GO:0072224 Uniprot:Q9BXB1
Length = 951
Score = 139 (54.0 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 42/130 (32%), Positives = 61/130 (46%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L LKVL++ +NQ +V A+ GL L SL N I + + SF L L HL L N
Sbjct: 104 LKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDN 163
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+ V L++L L L L+ N + ++ T L SL L L +N I ++
Sbjct: 164 SLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIRSLSQHCFDG 223
Query: 130 NVTITTLTLS 139
+ TL L+
Sbjct: 224 LDNLETLDLN 233
Score = 136 (52.9 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 43/129 (33%), Positives = 64/129 (49%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L+ L + N + V L+ L L +L+ N+I + D +F LS+L L L +N
Sbjct: 152 LVQLRHLWLDDNSLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNN 211
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+I ++S L NL TLDL++N L Q I L SL+EL N IS++
Sbjct: 212 KIRSLSQHCFDGLDNLETLDLNYNNLGEFPQ-AIKALPSLKELGFHSNSISVIPDGAFDG 270
Query: 130 NVTITTLTL 138
N + T+ L
Sbjct: 271 NPLLRTIHL 279
Score = 133 (51.9 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 36/113 (31%), Positives = 60/113 (53%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
+R LS+L+ L + N +SV + GL +L L N + + H L TL L L
Sbjct: 125 IRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPVHPLSNLPTLQALTL 184
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
A N+I ++ + +LS+L L L +N +R+L+Q L +L+ L L+ N++
Sbjct: 185 ALNKISSIPDFAFTNLSSLVVLHLHNNKIRSLSQHCFDGLDNLETLDLNYNNL 237
Score = 126 (49.4 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 40/120 (33%), Positives = 58/120 (48%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
L+ L +A N S + AL+GL +L L+ +NQ+ + + R LS L L L N I
Sbjct: 83 LEELQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHIT 142
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVT 132
+V S L L L L N L + ++ L +LQ L L N IS + PD N++
Sbjct: 143 SVPEDSFEGLVQLRHLWLDDNSLTEVPVHPLSNLPTLQALTLALNKISSI-PDFAFTNLS 201
Score = 117 (46.2 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 37/131 (28%), Positives = 57/131 (43%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L +L+ L++A N+ SS+ A L L L H+N+I L H F L L LDL +N
Sbjct: 176 LPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIRSLSQHCFDGLDNLETLDLNYN 235
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+ A A L +L L N + + L+ + L DN +S V +
Sbjct: 236 NLGEFPQAIKA-LPSLKELGFHSNSISVIPDGAFDGNPLLRTIHLYDNPLSFVGNSAFHN 294
Query: 130 NVTITTLTLSG 140
+ +L + G
Sbjct: 295 LSDLHSLVIRG 305
Score = 112 (44.5 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 32/126 (25%), Positives = 56/126 (44%)
Query: 14 KVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVA 73
+ L I+ N + + A L L N + + + L L L L +N++
Sbjct: 60 QALDISMNNITQLPEDAFKNFPFLEELQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKT 119
Query: 74 VSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTI 133
V ++ LS L +L L N + ++ +D L L+ L LDDN ++ V + + T+
Sbjct: 120 VPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPVHPLSNLPTL 179
Query: 134 TTLTLS 139
LTL+
Sbjct: 180 QALTLA 185
Score = 102 (41.0 bits), Expect = 0.00056, P = 0.00056
Identities = 30/105 (28%), Positives = 52/105 (49%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
L+ L +++N + + G L +S NQI +++ +F+ L +L LDL+ N I
Sbjct: 345 LRTLDLSYNNIRDLP--SFNGCHALEEISLQRNQIYQIKEGTFQGLISLRILDLSRNLIH 402
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
+ + A L +T LD+S N L + + L L +L+L N
Sbjct: 403 EIHSRAFATLGPITNLDVSFNELTSFPTE---GLNGLNQLKLVGN 444
>MGI|MGI:1891468 [details] [associations]
symbol:Lgr4 "leucine-rich repeat-containing G
protein-coupled receptor 4" species:10090 "Mus musculus"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0004930
"G-protein coupled receptor activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0030539 "male
genitalia development" evidence=IMP] [GO:0035239 "tube
morphogenesis" evidence=IMP] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0050673 "epithelial cell proliferation" evidence=IMP]
[GO:0061290 "canonical Wnt receptor signaling pathway involved in
metanephric kidney development" evidence=IMP] [GO:0072202 "cell
differentiation involved in metanephros development" evidence=IMP]
[GO:0072224 "metanephric glomerulus development" evidence=IMP]
[GO:0072282 "metanephric nephron tubule morphogenesis"
evidence=IMP] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450 MGI:MGI:1891468
GO:GO:0016021 GO:GO:0005886 GO:GO:0045892 GO:GO:0045893
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030539
GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 EMBL:AL928922
GeneTree:ENSGT00650000092962 GO:GO:0061290 GO:GO:0072282 CTD:55366
HOVERGEN:HBG031675 KO:K04309 OMA:DGYWSDC OrthoDB:EOG476JZH
ChiTaRS:LGR4 GO:GO:0072202 GO:GO:0072224 EMBL:AL845423
EMBL:AY255619 EMBL:AK044357 EMBL:BC056637 IPI:IPI00753252
RefSeq:NP_766259.2 UniGene:Mm.277351 UniGene:Mm.485992
ProteinModelPortal:A2ARI4 SMR:A2ARI4 STRING:A2ARI4
PhosphoSite:A2ARI4 PRIDE:A2ARI4 DNASU:107515
Ensembl:ENSMUST00000046548 GeneID:107515 KEGG:mmu:107515
UCSC:uc008lmq.1 HOGENOM:HOG000231829 InParanoid:A2ARI4
NextBio:358950 Bgee:A2ARI4 Genevestigator:A2ARI4 Uniprot:A2ARI4
Length = 951
Score = 139 (54.0 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 42/130 (32%), Positives = 61/130 (46%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L LKVL++ +NQ +V A+ GL L SL N I + + SF L L HL L N
Sbjct: 104 LKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDN 163
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+ V L++L L L L+ N + ++ T L SL L L +N I ++
Sbjct: 164 ILTEVPVRPLSNLPTLQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDG 223
Query: 130 NVTITTLTLS 139
+ TL L+
Sbjct: 224 LDNLETLDLN 233
Score = 129 (50.5 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 40/120 (33%), Positives = 59/120 (49%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
L+ L +A N S + AL+GL +L L+ +NQ+ + + R LS L L L N I
Sbjct: 83 LEELQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHIT 142
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVT 132
+V S L L L L N L + ++ L +LQ L L N+IS + PD N++
Sbjct: 143 SVPEDSFEGLVQLRHLWLDDNILTEVPVRPLSNLPTLQALTLALNNISSI-PDFAFTNLS 201
Score = 118 (46.6 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 37/131 (28%), Positives = 56/131 (42%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L +L+ L++A N SS+ A L L L H+N+I L H F L L LDL +N
Sbjct: 176 LPTLQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGLDNLETLDLNYN 235
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+ A A L +L L N + + L+ + L DN +S V +
Sbjct: 236 NLDEFPQAIKA-LPSLKELGFHSNSISVIPDGAFAGNPLLRTIHLYDNPLSFVGNSAFHN 294
Query: 130 NVTITTLTLSG 140
+ +L + G
Sbjct: 295 LSDLHSLVIRG 305
Score = 114 (45.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 32/94 (34%), Positives = 46/94 (48%)
Query: 33 GLDKLT-SLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLS 91
GL T +L N I L + +F+ L L LA N + + +L+ L L L L
Sbjct: 54 GLSAFTQALDISMNNITQLPEDAFKNFPFLEELQLAGNDLSFIHPKALSGLKELKVLTLQ 113
Query: 92 HNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
+N L+ + + I L +LQ LRLD N I+ V D
Sbjct: 114 NNQLKTVPSEAIRGLSALQSLRLDANHITSVPED 147
Score = 114 (45.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 31/107 (28%), Positives = 56/107 (52%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
L+ L +++N + + G L +S NQI ++++ +F+ L++L LDL+ N I
Sbjct: 345 LRTLDLSYNDIRDLP--SFNGCRALEEISLQRNQISLIKETTFQGLTSLRILDLSRNLIR 402
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRAL-TQDL--ITPLKSLQELRLDD 116
+ + A L +T LD+S N L + T+ L + LK + +L D
Sbjct: 403 EIHSGAFAKLGTITNLDVSFNELTSFPTEGLNGLNQLKLVGNFQLKD 449
>UNIPROTKB|G3N2S4 [details] [associations]
symbol:LRRC26 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0015459 "potassium channel regulator activity"
evidence=IEA] [GO:0008076 "voltage-gated potassium channel complex"
evidence=IEA] InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0008076 GO:GO:0015459 OMA:DAAFSHC
GeneTree:ENSGT00700000104083 EMBL:DAAA02032413
Ensembl:ENSBTAT00000065953 Uniprot:G3N2S4
Length = 262
Score = 130 (50.8 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 36/128 (28%), Positives = 59/128 (46%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
++VL + HN+ ++ GA L L N + + +F L L LDL+ N++
Sbjct: 9 VRVLLLNHNRVHALPPGAFVDAGALLRLDLRENGLRWVHARAFWGLGALEQLDLSANQLE 68
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVT 132
A+ + A L L L L+ N L L ++ L L+ L L DND+ + ++
Sbjct: 69 ALLPGTFAPLRALRALSLAENRLARLEPAVLGALPLLRALSLQDNDLPALASGLLAGLPA 128
Query: 133 ITTLTLSG 140
+ TL L G
Sbjct: 129 LNTLRLRG 136
Score = 116 (45.9 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 36/102 (35%), Positives = 44/102 (43%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
L + N V A GL L L NQ++ L +F L L L LA NR+ +
Sbjct: 36 LDLRENGLRWVHARAFWGLGALEQLDLSANQLEALLPGTFAPLRALRALSLAENRLARLE 95
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
A L L L L L N L AL L+ L +L LRL N
Sbjct: 96 PAVLGALPLLRALSLQDNDLPALASGLLAGLPALNTLRLRGN 137
>FB|FBgn0039332 [details] [associations]
symbol:alrm "astrocytic leucine-rich repeat molecule"
species:7227 "Drosophila melanogaster" [GO:0016942 "insulin-like
growth factor binding protein complex" evidence=ISS] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 EMBL:AE014297 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GeneTree:ENSGT00700000104286
EMBL:AY070512 RefSeq:NP_651393.1 UniGene:Dm.33515 SMR:Q9VBR3
EnsemblMetazoa:FBtr0084846 GeneID:43074 KEGG:dme:Dmel_CG11910
UCSC:CG11910-RA CTD:43074 FlyBase:FBgn0039332 InParanoid:Q9VBR3
OMA:MEDITAP OrthoDB:EOG4GTHV5 GenomeRNAi:43074 NextBio:832087
Uniprot:Q9VBR3
Length = 471
Score = 135 (52.6 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 36/130 (27%), Positives = 62/130 (47%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
S+L L + +N+ + + G D L +L NQ+ L +HSF AL + L LA N+
Sbjct: 113 SNLMSLFLGYNRLKDIPKNIFLGADNLATLHLQGNQLKQLGNHSFHALKEVKELSLAENQ 172
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDN 130
+ +S + + L L+L+ N L AL + + +L +L L N + +++
Sbjct: 173 LEQISLGVFSGMRKLMDLNLAGNRLDALPRGVFDRNLNLTKLNLARNRFTAFESELLKLQ 232
Query: 131 VTITTLTLSG 140
T L +SG
Sbjct: 233 PVFTQLDISG 242
Score = 119 (46.9 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 31/90 (34%), Positives = 43/90 (47%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L +K LS+A NQ + G +G+ KL L+ N++D L F L+ L+LA N
Sbjct: 160 LKEVKELSLAENQLEQISLGVFSGMRKLMDLNLAGNRLDALPRGVFDRNLNLTKLNLARN 219
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALT 99
R A L T LD+S N + LT
Sbjct: 220 RFTAFESELLKLQPVFTQLDISGNIFQELT 249
>UNIPROTKB|F1MMM6 [details] [associations]
symbol:SLIT3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070100 "negative regulation of chemokine-mediated
signaling pathway" evidence=IEA] [GO:0061364 "apoptotic process
involved in luteolysis" evidence=IEA] [GO:0051414 "response to
cortisol stimulus" evidence=IEA] [GO:0050919 "negative chemotaxis"
evidence=IEA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IEA] [GO:0048495 "Roundabout binding"
evidence=IEA] [GO:0035385 "Roundabout signaling pathway"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0008285
GO:GO:0005615 GO:GO:0030308 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
GO:GO:0051414 GeneTree:ENSGT00700000104083 GO:GO:0050919
GO:GO:0035385 GO:GO:0061364 OMA:SVDCHGL EMBL:DAAA02049822
EMBL:DAAA02049823 EMBL:DAAA02049824 EMBL:DAAA02049825
EMBL:DAAA02049826 EMBL:DAAA02049827 IPI:IPI01017433
Ensembl:ENSBTAT00000049620 Uniprot:F1MMM6
Length = 1339
Score = 133 (51.9 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 34/110 (30%), Positives = 55/110 (50%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
++L +L+ +++++N+ V+ GA G + L NQ++ +FR LS L L L
Sbjct: 368 KKLPNLRKINLSNNRIKEVKEGAFDGAASVQELVLTGNQLETAHGRAFRGLSGLKTLMLR 427
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
N I VS + A LS++ L L N + +T T L SL + L N
Sbjct: 428 SNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSN 477
Score = 127 (49.8 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 35/105 (33%), Positives = 54/105 (51%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
LK + I+ NQ S + A GL LTSL + N+I + F L +L L L N+I
Sbjct: 147 LKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKIN 206
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
+ + L +L+ L L N L+ +++ L PL+++Q L L N
Sbjct: 207 CLRVNTFQDLQSLSLLSLYDNKLQTISKGLFAPLQAIQTLHLAQN 251
Score = 125 (49.1 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 33/124 (26%), Positives = 61/124 (49%)
Query: 16 LSIAHNQFSSVRR-GALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAV 74
L + N+ S + G L L ++ +N+I +++ +F +++ L L N++
Sbjct: 351 LRLNDNEISVLEATGIFKKLPNLRKINLSNNRIKEVKEGAFDGAASVQELVLTGNQLETA 410
Query: 75 SGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTIT 134
G + LS L TL L N + ++ D L S++ L L DN I+ +TP V+++
Sbjct: 411 HGRAFRGLSGLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLS 470
Query: 135 TLTL 138
T+ L
Sbjct: 471 TINL 474
Score = 115 (45.5 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 38/109 (34%), Positives = 60/109 (55%)
Query: 33 GLDK-LTSLSCHHNQIDVL--EDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLD 89
G+ K +T L N + + E SFR L TL +DL++N I ++ + +++S+L+TL
Sbjct: 563 GIPKDVTELYLEGNHLTAVPKELSSFRHL-TL--IDLSNNSIGMLTNYTFSNMSHLSTLI 619
Query: 90 LSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTLTL 138
LS+N LR + L+SL+ L L NDIS V D +++ L L
Sbjct: 620 LSYNRLRCIPVHSFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLLL 668
Score = 108 (43.1 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 33/124 (26%), Positives = 54/124 (43%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
+ + N S+ GA KL + NQI + +F+ L +L+ L L N+I +
Sbjct: 126 IRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIP 185
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITT 135
L +L L L+ N + L + L+SL L L DN + ++ + I T
Sbjct: 186 KGLFDGLVSLQLLLLNANKINCLRVNTFQDLQSLSLLSLYDNKLQTISKGLFAPLQAIQT 245
Query: 136 LTLS 139
L L+
Sbjct: 246 LHLA 249
Score = 100 (40.3 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 27/84 (32%), Positives = 44/84 (52%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L SL L + N+ + + +G GL L L + N+I+ L ++F+ L +LS L L N
Sbjct: 168 LKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQSLSLLSLYDN 227
Query: 70 RIVAVSGASLAHLSNLTTLDLSHN 93
++ +S A L + TL L+ N
Sbjct: 228 KLQTISKGLFAPLQAIQTLHLAQN 251
Score = 52 (23.4 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 12/40 (30%), Positives = 24/40 (60%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHN 45
T LSS+++LS+ N+ +++ GA L L++++ N
Sbjct: 438 TFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSN 477
Score = 44 (20.5 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 86 TTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
T +D S+ L + L P + + +LRL+DN+IS++
Sbjct: 328 TIVDCSNQKLARIPSHL--P-EYVTDLRLNDNEISVL 361
>UNIPROTKB|Q9NR99 [details] [associations]
symbol:MXRA5 "Matrix-remodeling-associated protein 5"
species:9606 "Homo sapiens" [GO:0005576 "extracellular region"
evidence=IEA] InterPro:IPR007110 PROSITE:PS50835 GO:GO:0005576
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 MEROPS:I43.001
HSSP:Q9BZR6 eggNOG:NOG239806 EMBL:AF245505 EMBL:AC004616
EMBL:BC011846 EMBL:BC064986 EMBL:BC080586 EMBL:AL049946
IPI:IPI00012347 PIR:T08678 RefSeq:NP_056234.2 UniGene:Hs.369422
ProteinModelPortal:Q9NR99 STRING:Q9NR99 PhosphoSite:Q9NR99
DMDM:117949607 PaxDb:Q9NR99 PRIDE:Q9NR99 Ensembl:ENST00000217939
Ensembl:ENST00000381114 GeneID:25878 KEGG:hsa:25878 UCSC:uc004crg.4
CTD:25878 GeneCards:GC0XM003220 H-InvDB:HIX0016637 HGNC:HGNC:7539
HPA:HPA000508 neXtProt:NX_Q9NR99 PharmGKB:PA31340
HOGENOM:HOG000168306 InParanoid:Q9NR99 OMA:GALMTPN
OrthoDB:EOG4B5P48 PhylomeDB:Q9NR99 GenomeRNAi:25878 NextBio:47288
Bgee:Q9NR99 CleanEx:HS_MXRA5 Genevestigator:Q9NR99
GermOnline:ENSG00000101825 Uniprot:Q9NR99
Length = 2828
Score = 144 (55.7 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 37/130 (28%), Positives = 64/130 (49%)
Query: 3 IWCTVRRLSSLKV--------LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHS 54
+ CT R L+S+ +++ N ++ + AGL KL L H N+I + D +
Sbjct: 39 VHCTFRSLASVPAGIAKHVERINLGFNSIQALSETSFAGLTKLELLMIHGNEIPSIPDGA 98
Query: 55 FRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRL 114
R LS+L ++N++ ++G +L LSNL L + HN + + L SL+ L L
Sbjct: 99 LRDLSSLQVFKFSYNKLRVITGQTLQGLSNLMRLHIDHNKIEFIHPQAFNGLTSLRLLHL 158
Query: 115 DDNDISMVTP 124
+ N + + P
Sbjct: 159 EGNLLHQLHP 168
Score = 125 (49.1 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 37/127 (29%), Positives = 57/127 (44%)
Query: 15 VLSIAHNQFSSVRRGALAGLDK-LTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVA 73
V S H F S+ AG+ K + ++ N I L + SF L+ L L + N I +
Sbjct: 35 VPSEVHCTFRSLA-SVPAGIAKHVERINLGFNSIQALSETSFAGLTKLELLMIHGNEIPS 93
Query: 74 VSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTI 133
+ +L LS+L S+N LR +T + L +L L +D N I + P ++
Sbjct: 94 IPDGALRDLSSLQVFKFSYNKLRVITGQTLQGLSNLMRLHIDHNKIEFIHPQAFNGLTSL 153
Query: 134 TTLTLSG 140
L L G
Sbjct: 154 RLLHLEG 160
Score = 109 (43.4 bits), Expect = 0.00017, P = 0.00017
Identities = 30/105 (28%), Positives = 48/105 (45%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L+ L++L I N+ S+ GAL L L +N++ V+ + + LS L L + HN
Sbjct: 78 LTKLELLMIHGNEIPSIPDGALRDLSSLQVFKFSYNKLRVITGQTLQGLSNLMRLHIDHN 137
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRL 114
+I + + L++L L L N L L + L RL
Sbjct: 138 KIEFIHPQAFNGLTSLRLLHLEGNLLHQLHPSTFSTFTFLDYFRL 182
>MGI|MGI:2441805 [details] [associations]
symbol:Lgr6 "leucine-rich repeat-containing G
protein-coupled receptor 6" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0004930 "G-protein coupled
receptor activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016500 "protein-hormone
receptor activity" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450
MGI:MGI:2441805 GO:GO:0016021 GO:GO:0005886 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 SMART:SM00013
GO:GO:0016500 HSSP:P21809 GeneTree:ENSGT00650000092962
HOVERGEN:HBG031675 HOGENOM:HOG000231829 CTD:59352 KO:K08399
OrthoDB:EOG4SQWW8 EMBL:AK137380 EMBL:BC026896 EMBL:AY255562
IPI:IPI00321212 RefSeq:NP_001028581.1 UniGene:Mm.279594
ProteinModelPortal:Q3UVD5 SMR:Q3UVD5 IntAct:Q3UVD5
PhosphoSite:Q3UVD5 PRIDE:Q3UVD5 Ensembl:ENSMUST00000044828
GeneID:329252 KEGG:mmu:329252 UCSC:uc007csq.1 InParanoid:Q3UVD5
OMA:AYGKAPS NextBio:398648 Bgee:Q3UVD5 Genevestigator:Q3UVD5
Uniprot:Q3UVD5
Length = 967
Score = 139 (54.0 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 35/110 (31%), Positives = 56/110 (50%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
+SL++L++ + G L +L L HNQI+ L S L + L HNR
Sbjct: 328 TSLEILTLTRAGIRLLPPGVCQQLPRLRILELSHNQIEELP--SLHRCQKLEEIGLRHNR 385
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
I + + + L +L LDLS N +RA+ + + L+SL +L L DN ++
Sbjct: 386 IKEIGADTFSQLGSLQALDLSWNAIRAIHPEAFSTLRSLVKLDLTDNQLT 435
Score = 130 (50.8 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 40/113 (35%), Positives = 61/113 (53%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
LSSL+ L + N + + AL L L +++ N I + D++F+ L++L L L +N
Sbjct: 161 LSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNHIRHIPDYAFQNLTSLVVLHLHNN 220
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
RI V S L NL TLDL++N L+ + T L LQEL +N+I +
Sbjct: 221 RIQHVGTHSFEGLHNLETLDLNYNELQEFPLAIRT-LGRLQELGFHNNNIKAI 272
Score = 128 (50.1 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 38/113 (33%), Positives = 54/113 (47%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L SLK+L + NQ + AL L L SL N I ++ + SF LS+L HL L N
Sbjct: 113 LHSLKILMLQSNQLRGIPAEALWELPSLQSLRLDANLISLVPERSFEGLSSLRHLWLDDN 172
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
+ + +L +L L + L+ N +R + L SL L L +N I V
Sbjct: 173 ALTEIPVRALNNLPALQAMTLALNHIRHIPDYAFQNLTSLVVLHLHNNRIQHV 225
Score = 120 (47.3 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 34/110 (30%), Positives = 55/110 (50%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
++L L++L ++HNQ + +L KL + HN+I + +F L +L LDL+
Sbjct: 349 QQLPRLRILELSHNQIEELP--SLHRCQKLEEIGLRHNRIKEIGADTFSQLGSLQALDLS 406
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
N I A+ + + L +L LDL+ N L L + L L L+L N
Sbjct: 407 WNAIRAIHPEAFSTLRSLVKLDLTDNQLTTLP---LAGLGGLMHLKLKGN 453
Score = 116 (45.9 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 36/134 (26%), Positives = 58/134 (43%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
+ L +L+ +++A N + A L L L H+N+I + HSF L L LDL
Sbjct: 182 LNNLPALQAMTLALNHIRHIPDYAFQNLTSLVVLHLHNNRIQHVGTHSFEGLHNLETLDL 241
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDV 126
+N + A + L L L +N ++A+ + LQ + DN I V
Sbjct: 242 NYNELQEFPLA-IRTLGRLQELGFHNNNIKAIPEKAFMGSPLLQTIHFYDNPIQFVGRSA 300
Query: 127 IGDNVTITTLTLSG 140
+ TL+L+G
Sbjct: 301 FQYLSKLHTLSLNG 314
Score = 115 (45.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 34/92 (36%), Positives = 47/92 (51%)
Query: 32 AGLDKLTS-LSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDL 90
A LD LT+ L N + L+ F L L L L+ N + + G + + L +L L L
Sbjct: 62 ADLDPLTAYLDLSMNNLTELQPGLFHHLRFLEELRLSGNHLSHIPGQAFSGLHSLKILML 121
Query: 91 SHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
N LR + + + L SLQ LRLD N IS+V
Sbjct: 122 QSNQLRGIPAEALWELPSLQSLRLDANLISLV 153
>ZFIN|ZDB-GENE-071002-1 [details] [associations]
symbol:tlr20al "toll-like receptor 20a, like"
species:7955 "Danio rerio" [GO:0007165 "signal transduction"
evidence=IEA] Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
ZFIN:ZDB-GENE-071002-1 GO:GO:0007165 InterPro:IPR003591
SMART:SM00369 GO:GO:0005622 SUPFAM:SSF52200
GeneTree:ENSGT00680000099674 EMBL:CR392351 IPI:IPI00836032
ProteinModelPortal:F1QRG0 Ensembl:ENSDART00000124265 Uniprot:F1QRG0
Length = 973
Score = 139 (54.0 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 35/129 (27%), Positives = 63/129 (48%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L+ LK L++ N+ SS+ R +GL +L+ + +N+ID + H F L L L +
Sbjct: 444 LNKLKELNLHRNKISSIHRHTFSGLHELSVMILKNNRIDKIVSHQFMCFVNLKTLKLVMS 503
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+I + L+ L L+L N + ++ + + L L+ L L +N I + P G
Sbjct: 504 KISVFEDFAFIGLNKLKELNLHSNKISSIHRHTFSGLHELRVLDLQENPIIYIEPKSFGH 563
Query: 130 NVTITTLTL 138
+++L L
Sbjct: 564 FTNLSSLLL 572
Score = 127 (49.8 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 35/111 (31%), Positives = 51/111 (45%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
+LK L + ++ S A GL+KL L+ H N+I + H+F L LS + L +NRI
Sbjct: 422 NLKTLKLVMSKISVFEDFAFIGLNKLKELNLHRNKISSIHRHTFSGLHELSVMILKNNRI 481
Query: 72 VAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
+ NL TL L + + L L+EL L N IS +
Sbjct: 482 DKIVSHQFMCFVNLKTLKLVMSKISVFEDFAFIGLNKLKELNLHSNKISSI 532
Score = 111 (44.1 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 32/90 (35%), Positives = 44/90 (48%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
TV+++S + + I F A GL+KL L+ H N+I + H+F L L LD
Sbjct: 65 TVKKISDMVLRIIRIEDF------AFIGLNKLKELNLHSNKISSIHQHTFSGLHELRVLD 118
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSH-NF 94
L N + + S HL NL TL L NF
Sbjct: 119 LNENPLFHIEPESFRHLINLRTLLLGDLNF 148
>ZFIN|ZDB-GENE-031113-8 [details] [associations]
symbol:lrrc15 "leucine rich repeat containing 15"
species:7955 "Danio rerio" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001611 PROSITE:PS51450 ZFIN:ZDB-GENE-031113-8
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00700000104286
OMA:NHLEYIP EMBL:BX950188 EMBL:BX957243 IPI:IPI00628487
UniGene:Dr.18765 Ensembl:ENSDART00000104248 HOVERGEN:HBG095770
Uniprot:B0S8K3
Length = 564
Score = 136 (52.9 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 30/108 (27%), Positives = 62/108 (57%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L+++++L I+ N+ + GA GL +L +S H N++ +E FR L L+++ + +N
Sbjct: 311 LTNIRLLVISRNRIQYISPGAFNGLIELKEVSLHTNRLTNIEPGIFRGLPNLANISIENN 370
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
+I + L +S L+ L++ +N L+ L +D + L ++ + L +N
Sbjct: 371 QIKQIPIQLLDGVSRLSLLEMQNNSLQNLPKDFLNTLSIVENVILHEN 418
Score = 132 (51.5 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 36/129 (27%), Positives = 59/129 (45%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L ++ L ++ N SS+ A GLD+L L N I L +F+ LS L L L N
Sbjct: 144 LVNVNKLDLSKNLLSSLSEDAFRGLDQLEMLMLQRNSIKQLHSSTFQGLSHLRSLFLQQN 203
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+ + L NL L L N + L +L ++ L++L L N +S++ + +
Sbjct: 204 ELTDIPAGLFDDLVNLEVLHLQDNKIEQLPANLFAKVQKLKKLYLSSNRLSLLPSGIFLN 263
Query: 130 NVTITTLTL 138
+T +L
Sbjct: 264 LPNLTHFSL 272
Score = 125 (49.1 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 39/134 (29%), Positives = 62/134 (46%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T + LS L+ L + N+ + + G L L L N+I+ L + F + L L
Sbjct: 188 TFQGLSHLRSLFLQQNELTDIPAGLFDDLVNLEVLHLQDNKIEQLPANLFAKVQKLKKLY 247
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
L+ NR+ + +L NLT L N L L + P+ +LQEL L DN ++ + +
Sbjct: 248 LSSNRLSLLPSGIFLNLPNLTHFSLYDNRLSRLMPETFGPM-ALQELWLYDNLLTHLEEN 306
Query: 126 VIGDNVTITTLTLS 139
V + I L +S
Sbjct: 307 VFSNLTNIRLLVIS 320
Score = 115 (45.5 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 35/132 (26%), Positives = 59/132 (44%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
+ L++L L+++ N+ + L L + L N + L + +FR L L L L
Sbjct: 118 QNLTALTTLTLSGNKLEVLPSSLLTPLVNVNKLDLSKNLLSSLSEDAFRGLDQLEMLMLQ 177
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI 127
N I + ++ LS+L +L L N L + L L +L+ L L DN I + ++
Sbjct: 178 RNSIKQLHSSTFQGLSHLRSLFLQQNELTDIPAGLFDDLVNLEVLHLQDNKIEQLPANLF 237
Query: 128 GDNVTITTLTLS 139
+ L LS
Sbjct: 238 AKVQKLKKLYLS 249
Score = 112 (44.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 34/121 (28%), Positives = 49/121 (40%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
R L L++L + N + GL L SL N++ + F L L L L
Sbjct: 166 RGLDQLEMLMLQRNSIKQLHSSTFQGLSHLRSLFLQQNELTDIPAGLFDDLVNLEVLHLQ 225
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI 127
N+I + A + L L LS N L L + L +L L DN +S + P+
Sbjct: 226 DNKIEQLPANLFAKVQKLKKLYLSSNRLSLLPSGIFLNLPNLTHFSLYDNRLSRLMPETF 285
Query: 128 G 128
G
Sbjct: 286 G 286
Score = 110 (43.8 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 32/127 (25%), Positives = 57/127 (44%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRI 71
+L VL + +S+ L LT+L+ N+++VL L ++ LDL+ N +
Sbjct: 98 NLNVLGFSGTMLTSLPDNLFQNLTALTTLTLSGNKLEVLPSSLLTPLVNVNKLDLSKNLL 157
Query: 72 VAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNV 131
++S + L L L L N ++ L L L+ L L N+++ + + D V
Sbjct: 158 SSLSEDAFRGLDQLEMLMLQRNSIKQLHSSTFQGLSHLRSLFLQQNELTDIPAGLFDDLV 217
Query: 132 TITTLTL 138
+ L L
Sbjct: 218 NLEVLHL 224
Score = 103 (41.3 bits), Expect = 0.00011, P = 0.00011
Identities = 30/115 (26%), Positives = 55/115 (47%)
Query: 12 SLKVLSIAHNQFSSVRRGALAGL-DKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
++ L I++ S++ + LT ++ I +E H+F L+ L +
Sbjct: 49 TINALVISNTSIQSLKPSDFQTFAETLTLFVAKNSNITEVEPHTFDQAFNLNVLGFSGTM 108
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
+ ++ +L+ LTTL LS N L L L+TPL ++ +L L N +S ++ D
Sbjct: 109 LTSLPDNLFQNLTALTTLTLSGNKLEVLPSSLLTPLVNVNKLDLSKNLLSSLSED 163
>ZFIN|ZDB-GENE-010306-3 [details] [associations]
symbol:slit2 "slit (Drosophila) homolog 2"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IMP] [GO:0033564
"anterior/posterior axon guidance" evidence=IMP] [GO:0007414
"axonal defasciculation" evidence=IMP] [GO:0001763 "morphogenesis
of a branching structure" evidence=IMP] [GO:0003262 "endocardial
progenitor cell migration to the midline involved in heart field
formation" evidence=IGI] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0030517 "negative regulation of axon extension"
evidence=IGI;IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152
ZFIN:ZDB-GENE-010306-3 GO:GO:0005576 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0030517 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 HSSP:P00740 Pfam:PF12661 GO:GO:0001763
GO:GO:0007414 Pfam:PF01463 GO:GO:0033564 HOGENOM:HOG000116120
HOVERGEN:HBG057959 CTD:9353 KO:K06839 OrthoDB:EOG4D7Z4T
GO:GO:0003262 EMBL:AF210321 EMBL:CU638813 IPI:IPI00491594
RefSeq:NP_571810.1 UniGene:Dr.10489 SMR:Q9DE36 IntAct:Q9DE36
GeneID:80353 KEGG:dre:80353 NextBio:20934061 Uniprot:Q9DE36
Length = 1512
Score = 141 (54.7 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 33/114 (28%), Positives = 58/114 (50%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L +L+VL + N+ SS+ RGA L +L L + N + VL + F + L LDL+ N
Sbjct: 71 LKNLRVLQLMENKISSIERGAFQDLQELERLRLNRNNLQVLPELLFLGTTKLFRLDLSEN 130
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVT 123
+I + + + + L L +N + + L L+ L L++N+IS ++
Sbjct: 131 QIQGIPRKAFRGSTEIKNLQLDYNQISCIEDGAFRALGDLEVLTLNNNNISRLS 184
Score = 126 (49.4 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 31/81 (38%), Positives = 44/81 (54%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
L ++ NQ + R A G ++ +L +NQI +ED +FRAL L L L +N I +S
Sbjct: 125 LDLSENQIQGIPRKAFRGSTEIKNLQLDYNQISCIEDGAFRALGDLEVLTLNNNNISRLS 184
Query: 76 GASLAHLSNLTTLDL-SHNFL 95
AS H+ L T L S+N L
Sbjct: 185 VASFNHMPKLRTFRLHSNNLL 205
Score = 119 (46.9 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 35/124 (28%), Positives = 62/124 (50%)
Query: 16 LSIAHNQFSSVRR-GALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAV 74
L + +N+F+ + G L +L ++ +N+I +E+ +F S ++ L L NR+ V
Sbjct: 521 LRLNNNEFTVLEATGIFKKLPQLRKINLSNNKITDIEEGTFEGASGVNELILTSNRLEGV 580
Query: 75 SGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTIT 134
+ L L L TL L N + + T L S++ L L DN I+ ++P +++
Sbjct: 581 HYSMLKGLGGLRTLMLRSNRISCVNNGSFTGLSSVRLLSLYDNLITSMSPGAFDTLHSLS 640
Query: 135 TLTL 138
TL L
Sbjct: 641 TLNL 644
Score = 115 (45.5 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 31/84 (36%), Positives = 47/84 (55%)
Query: 58 LSTLSHL---DLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRL 114
LS HL DL++N+I +S S +++S L TL LS+N LR + LKSL+ L L
Sbjct: 756 LSNYKHLTLIDLSNNQISTLSNHSFSNMSELLTLILSYNRLRCIPAKAFDGLKSLRLLSL 815
Query: 115 DDNDISMVTPDVIGDNVTITTLTL 138
NDI+++ D +++ L L
Sbjct: 816 HGNDIAVIPDGAFKDLSSLSHLAL 839
Score = 108 (43.1 bits), Expect = 0.00011, P = 0.00011
Identities = 31/105 (29%), Positives = 51/105 (48%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
L+ + +++NQ + + + GL L SL + N+I L F L +L L L N+I
Sbjct: 317 LRRIDLSNNQITELASDSFQGLRSLNSLVLYGNKITELPKGLFDGLFSLQLLLLNANKIN 376
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
+ S L NL L L N L+ + + + L+++Q L L N
Sbjct: 377 CLRVDSFQDLQNLNLLSLYDNKLQTIAKGTFSSLRAIQTLHLAQN 421
Score = 107 (42.7 bits), Expect = 0.00014, P = 0.00014
Identities = 30/99 (30%), Positives = 46/99 (46%)
Query: 21 NQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLA 80
N+F+ V L+ LT + +NQI L +HSF +S L L L++NR+ + +
Sbjct: 747 NEFTQVPL-ELSNYKHLTLIDLSNNQISTLSNHSFSNMSELLTLILSYNRLRCIPAKAFD 805
Query: 81 HLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
L +L L L N + + L SL L L N +
Sbjct: 806 GLKSLRLLSLHGNDIAVIPDGAFKDLSSLSHLALGANPL 844
Score = 107 (42.7 bits), Expect = 0.00014, P = 0.00014
Identities = 34/124 (27%), Positives = 53/124 (42%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
+ + N + GA A +L + +NQI L SF+ L +L+ L L N+I +
Sbjct: 296 IRLEQNSIKIIPAGAFAPYKRLRRIDLSNNQITELASDSFQGLRSLNSLVLYGNKITELP 355
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITT 135
L +L L L+ N + L D L++L L L DN + + I T
Sbjct: 356 KGLFDGLFSLQLLLLNANKINCLRVDSFQDLQNLNLLSLYDNKLQTIAKGTFSSLRAIQT 415
Query: 136 LTLS 139
L L+
Sbjct: 416 LHLA 419
Score = 105 (42.0 bits), Expect = 0.00023, P = 0.00023
Identities = 26/107 (24%), Positives = 50/107 (46%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
++L L+ +++++N+ + + G G + L N+++ + + L L L L
Sbjct: 538 KKLPQLRKINLSNNKITDIEEGTFEGASGVNELILTSNRLEGVHYSMLKGLGGLRTLMLR 597
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRL 114
NRI V+ S LS++ L L N + +++ L SL L L
Sbjct: 598 SNRISCVNNGSFTGLSSVRLLSLYDNLITSMSPGAFDTLHSLSTLNL 644
Score = 104 (41.7 bits), Expect = 0.00029, P = 0.00029
Identities = 31/124 (25%), Positives = 52/124 (41%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
L + N + + + AGL L L N+I +E +F+ L L L L N + +
Sbjct: 53 LDLNANNLTKITKADFAGLKNLRVLQLMENKISSIERGAFQDLQELERLRLNRNNLQVLP 112
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITT 135
+ L LDLS N ++ + + ++ L+LD N IS + +
Sbjct: 113 ELLFLGTTKLFRLDLSENQIQGIPRKAFRGSTEIKNLQLDYNQISCIEDGAFRALGDLEV 172
Query: 136 LTLS 139
LTL+
Sbjct: 173 LTLN 176
Score = 102 (41.0 bits), Expect = 0.00094, P = 0.00094
Identities = 24/60 (40%), Positives = 34/60 (56%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
+S L L +++N+ + A GL L LS H N I V+ D +F+ LS+LSHL L N
Sbjct: 783 MSELLTLILSYNRLRCIPAKAFDGLKSLRLLSLHGNDIAVIPDGAFKDLSSLSHLALGAN 842
Score = 34 (17.0 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 86 TTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
TT+D S L + + P + ELRL++N+ +++
Sbjct: 498 TTVDCSGQKLTKIPDHI--P-QYTAELRLNNNEFTVL 531
>ZFIN|ZDB-GENE-080327-25 [details] [associations]
symbol:lrrc4ba "leucine rich repeat containing 4Ba"
species:7955 "Danio rerio" [GO:0051965 "positive regulation of
synapse assembly" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026883 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-080327-25 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00690000101682 KO:K16360
PANTHER:PTHR24369:SF7 EMBL:CR936968 IPI:IPI00774078
RefSeq:XP_684717.3 UniGene:Dr.114368 Ensembl:ENSDART00000076649
Ensembl:ENSDART00000150958 GeneID:556747 KEGG:dre:556747 CTD:556747
NextBio:20881642 Uniprot:F1QBH8
Length = 729
Score = 137 (53.3 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 30/87 (34%), Positives = 49/87 (56%)
Query: 31 LAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDL 90
L L +L L N+++++ SF+ L +L L L H+++ + + L NL L+L
Sbjct: 208 LTPLVRLEELELSGNRLEIIRPGSFQGLESLRKLWLMHSQMSVIERNAFDDLKNLEELNL 267
Query: 91 SHNFLRALTQDLITPLKSLQELRLDDN 117
SHN L +L DL TPL+ L+ + L+ N
Sbjct: 268 SHNSLHSLPHDLFTPLQKLERVHLNHN 294
Score = 115 (45.5 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 26/84 (30%), Positives = 45/84 (53%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L+ L ++ N+ +R G+ GL+ L L H+Q+ V+E ++F L L L+L+HN
Sbjct: 211 LVRLEELELSGNRLEIIRPGSFQGLESLRKLWLMHSQMSVIERNAFDDLKNLEELNLSHN 270
Query: 70 RIVAVSGASLAHLSNLTTLDLSHN 93
+ ++ L L + L+HN
Sbjct: 271 SLHSLPHDLFTPLQKLERVHLNHN 294
Score = 111 (44.1 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 35/123 (28%), Positives = 57/123 (46%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T + L L++L ++ NQ + GA GL L +L N++ ++ +F LS L L
Sbjct: 88 TFKHLRHLEILQLSKNQIRQIEVGAFNGLPNLNTLELFDNRLTLVPSQAFEYLSKLRELW 147
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSH-NFLRALTQDLITPLKSLQELRLDD---NDISM 121
L +N I + G + + +L LDL L ++ L +L+ L L DI
Sbjct: 148 LRNNPIETLPGYAFHRVPSLRRLDLGELKKLDYISDAAFVGLINLRYLNLGMCGLKDIPN 207
Query: 122 VTP 124
+TP
Sbjct: 208 LTP 210
>TAIR|locus:2085537 [details] [associations]
symbol:RLP34 "AT3G11010" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0006952
"defense response" evidence=ISS] [GO:0016301 "kinase activity"
evidence=ISS] [GO:0007165 "signal transduction" evidence=IC]
Pfam:PF00560 InterPro:IPR001611 EMBL:CP002686 InterPro:IPR025875
Pfam:PF12799 InterPro:IPR013210 Pfam:PF08263 UniGene:At.22181
UniGene:At.39822 IPI:IPI00548025 RefSeq:NP_187712.2
ProteinModelPortal:F4J519 SMR:F4J519 EnsemblPlants:AT3G11010.1
GeneID:820272 KEGG:ath:AT3G11010 OMA:GNRFFGQ Uniprot:F4J519
Length = 894
Score = 138 (53.6 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 45/137 (32%), Positives = 63/137 (45%)
Query: 3 IWCTVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLS 62
I ++ LS L L +++N+FS ++ L +LTSL NQ S LS L+
Sbjct: 74 ITSSIENLSHLTSLDLSYNRFSGQILNSIGNLSRLTSLDLSFNQFSGQIPSSIGNLSHLT 133
Query: 63 HLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
L L+ NR +S+ +LS+LT L LS N I L +L L L N S
Sbjct: 134 FLGLSGNRFFGQIPSSIGNLSHLTFLGLSGNRFFGQFPSSIGGLSNLTNLHLSYNKYSGQ 193
Query: 123 TPDVIGDNVTITTLTLS 139
P IG+ + L LS
Sbjct: 194 IPSSIGNLSQLIVLYLS 210
Score = 127 (49.8 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 43/134 (32%), Positives = 59/134 (44%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
++R L L L +HN F ++ L LTSL +N+ +S LS L+ LD
Sbjct: 53 SIRNLHFLTTLDRSHNDFEGQITSSIENLSHLTSLDLSYNRFSGQILNSIGNLSRLTSLD 112
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
L+ N+ +S+ +LS+LT L LS N I L L L L N P
Sbjct: 113 LSFNQFSGQIPSSIGNLSHLTFLGLSGNRFFGQIPSSIGNLSHLTFLGLSGNRFFGQFPS 172
Query: 126 VIGDNVTITTLTLS 139
IG +T L LS
Sbjct: 173 SIGGLSNLTNLHLS 186
Score = 126 (49.4 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 43/124 (34%), Positives = 56/124 (45%)
Query: 17 SIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSG 76
S H +F S ++ L LT+L HN + S LS L+ LDL++NR
Sbjct: 42 SSLHGRFHS--NSSIRNLHFLTTLDRSHNDFEGQITSSIENLSHLTSLDLSYNRFSGQIL 99
Query: 77 ASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTL 136
S+ +LS LT+LDLS N I L L L L N P IG+ +T L
Sbjct: 100 NSIGNLSRLTSLDLSFNQFSGQIPSSIGNLSHLTFLGLSGNRFFGQIPSSIGNLSHLTFL 159
Query: 137 TLSG 140
LSG
Sbjct: 160 GLSG 163
Score = 117 (46.2 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 42/134 (31%), Positives = 58/134 (43%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
++ LS L L ++ NQFS ++ L LT L N+ S LS L+ L
Sbjct: 101 SIGNLSRLTSLDLSFNQFSGQIPSSIGNLSHLTFLGLSGNRFFGQIPSSIGNLSHLTFLG 160
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
L+ NR +S+ LSNLT L LS+N I L L L L N+ P
Sbjct: 161 LSGNRFFGQFPSSIGGLSNLTNLHLSYNKYSGQIPSSIGNLSQLIVLYLSVNNFYGEIPS 220
Query: 126 VIGDNVTITTLTLS 139
G+ +T L +S
Sbjct: 221 SFGNLNQLTRLDVS 234
Score = 112 (44.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 36/102 (35%), Positives = 49/102 (48%)
Query: 39 SLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRAL 98
+LSC + S R L L+ LD +HN +S+ +LS+LT+LDLS+N
Sbjct: 38 NLSCSSLHGRFHSNSSIRNLHFLTTLDRSHNDFEGQITSSIENLSHLTSLDLSYNRFSGQ 97
Query: 99 TQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTLTLSG 140
+ I L L L L N S P IG+ +T L LSG
Sbjct: 98 ILNSIGNLSRLTSLDLSFNQFSGQIPSSIGNLSHLTFLGLSG 139
Score = 106 (42.4 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 39/138 (28%), Positives = 65/138 (47%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID-VLEDHSFRALSTLSHLD 65
+ LS+L + N F+ L + LT L NQ+ LE + + S L +L+
Sbjct: 270 ITSLSNLMAFYASDNAFTGTFPSFLFIIPSLTYLGLSGNQLKGTLEFGNISSPSNLQYLN 329
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSH-NF-LRALTQDLITPLKSLQELRLDDNDISMVT 123
+ N + +S++ L NL L +SH N R + + + LKSL +LRL + +
Sbjct: 330 IGSNNFIGPIPSSISKLINLQELGISHLNTQCRPVDFSIFSHLKSLDDLRLSYLTTTTID 389
Query: 124 -PDVIGDNVTITTLTLSG 140
D++ T+ +L LSG
Sbjct: 390 LNDILPYFKTLRSLDLSG 407
Score = 102 (41.0 bits), Expect = 0.00052, P = 0.00052
Identities = 33/119 (27%), Positives = 54/119 (45%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
++ LS L L ++ N+F ++ GL LT+L +N+ S LS L L
Sbjct: 149 SIGNLSHLTFLGLSGNRFFGQFPSSIGGLSNLTNLHLSYNKYSGQIPSSIGNLSQLIVLY 208
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTP 124
L+ N +S +L+ LT LD+S N L +++ L L + L +N + P
Sbjct: 209 LSVNNFYGEIPSSFGNLNQLTRLDVSFNKLGGNFPNVLLNLTGLSVVSLSNNKFTGTLP 267
>UNIPROTKB|F1NXL1 [details] [associations]
symbol:RTN4RL2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004872 "receptor activity" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0046658 "anchored to
plasma membrane" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
GO:GO:0009986 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0004872 InterPro:IPR000372 SMART:SM00013
GO:GO:0046658 GeneTree:ENSGT00690000101803 OMA:WFREARV
EMBL:AADN02050753 IPI:IPI00574718 ProteinModelPortal:F1NXL1
Ensembl:ENSGALT00000038761 Uniprot:F1NXL1
Length = 306
Score = 131 (51.2 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 39/110 (35%), Positives = 55/110 (50%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
R L SL+ L + N ++ A L L+ L H N++ L + FR L +L L L
Sbjct: 147 RGLHSLQYLYLQENGLLYLQDDLFADLANLSHLFLHGNRLRALSEGVFRGLPSLDRLLLH 206
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
NR+ V + L+ LT L L +N L AL D + L +LQ LRL+ N
Sbjct: 207 ANRLATVHRRAFRGLARLTILYLFNNSLAALPGDPLAALPALQFLRLNAN 256
Score = 117 (46.2 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 38/118 (32%), Positives = 57/118 (48%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRR-GALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHL 64
T R L +L+ L + N V GL +L +L + Q+ L FR L +L +L
Sbjct: 96 TFRHLPALEELDLGDNPHLRVLAPDTFHGLRRLQALHLYRCQLASLPSAIFRGLHSLQYL 155
Query: 65 DLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMV 122
L N ++ + A L+NL+ L L N LRAL++ + L SL L L N ++ V
Sbjct: 156 YLQENGLLYLQDDLFADLANLSHLFLHGNRLRALSEGVFRGLPSLDRLLLHANRLATV 213
Score = 103 (41.3 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 37/126 (29%), Positives = 55/126 (43%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
L + +N ++R G G +T L + N I ++ +FR L L LDL N + V
Sbjct: 60 LFLQNNVIRALRAGTF-GPSTVT-LWLYSNNISSIQPGTFRHLPALEELDLGDNPHLRVL 117
Query: 76 GASLAH-LSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTIT 134
H L L L L L +L + L SLQ L L +N + + D+ D ++
Sbjct: 118 APDTFHGLRRLQALHLYRCQLASLPSAIFRGLHSLQYLYLQENGLLYLQDDLFADLANLS 177
Query: 135 TLTLSG 140
L L G
Sbjct: 178 HLFLHG 183
>MGI|MGI:2443955 [details] [associations]
symbol:Lrig3 "leucine-rich repeats and immunoglobulin-like
domains 3" species:10090 "Mus musculus" [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:2443955 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101816 InterPro:IPR025875 Pfam:PF12799
HOGENOM:HOG000113380 HOVERGEN:HBG052353 CTD:121227 OMA:SHHQFVT
OrthoDB:EOG4K6G3K EMBL:AY505341 EMBL:BC065142 EMBL:AK044994
EMBL:AK078783 EMBL:AK129481 IPI:IPI00399981 RefSeq:NP_796126.4
UniGene:Mm.275586 PDB:3SO5 PDBsum:3SO5 ProteinModelPortal:Q6P1C6
SMR:Q6P1C6 PhosphoSite:Q6P1C6 PRIDE:Q6P1C6
Ensembl:ENSMUST00000074807 GeneID:320398 KEGG:mmu:320398
UCSC:uc007hhc.2 InParanoid:Q6P1C6 NextBio:396650 Bgee:Q6P1C6
Genevestigator:Q6P1C6 GermOnline:ENSMUSG00000020105 Uniprot:Q6P1C6
Length = 1117
Score = 139 (54.0 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 39/113 (34%), Positives = 59/113 (52%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQID-VLEDHS--FRALSTLSHLDL 66
LS L L I +N+ S + A GL L +L +N+I +ED S F L L L L
Sbjct: 334 LSLLNALHIGNNKVSYIADCAFRGLTSLKTLDLRNNEISWTIEDMSGAFSGLDRLRQLIL 393
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
NRI +++ + A L L LDLS N + +L + + +K LQ+L L+ + +
Sbjct: 394 QGNRIRSITKKAFAGLDTLEHLDLSGNAIMSLQSNAFSQMKKLQQLHLNTSSL 446
Score = 137 (53.3 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 36/119 (30%), Positives = 58/119 (48%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
LS+++VL + HN + + +G L GL L L N I+ + ++ LS LDL N
Sbjct: 262 LSNMEVLQLDHNNLTEITKGWLYGLLMLRELHLSQNAINRISPDAWEFCQKLSELDLTFN 321
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIG 128
+ + +S LS L L + +N + + L SL+ L L +N+IS D+ G
Sbjct: 322 HLSRLDDSSFLGLSLLNALHIGNNKVSYIADCAFRGLTSLKTLDLRNNEISWTIEDMSG 380
Score = 133 (51.9 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 34/115 (29%), Positives = 59/115 (51%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
S+L VL + N+ S++ + L +L L + N+I ++ +F+ L L L + N
Sbjct: 192 STLLVLKLNRNRISAIPP-KMFKLPQLQHLELNRNKIKNVDGLTFQGLGALKSLKMQRNG 250
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
+ + + LSN+ L L HN L +T+ + L L+EL L N I+ ++PD
Sbjct: 251 VTKLMDGAFWGLSNMEVLQLDHNNLTEITKGWLYGLLMLRELHLSQNAINRISPD 305
Score = 132 (51.5 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 32/94 (34%), Positives = 52/94 (55%)
Query: 5 CTVRRLSSLKVLSIAHNQFS-SVR--RGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTL 61
C R L+SLK L + +N+ S ++ GA +GLD+L L N+I + +F L TL
Sbjct: 353 CAFRGLTSLKTLDLRNNEISWTIEDMSGAFSGLDRLRQLILQGNRIRSITKKAFAGLDTL 412
Query: 62 SHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNFL 95
HLDL+ N I+++ + + + L L L+ + L
Sbjct: 413 EHLDLSGNAIMSLQSNAFSQMKKLQQLHLNTSSL 446
Score = 132 (51.5 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 38/134 (28%), Positives = 65/134 (48%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L+ L ++ N + + A KL+ L N + L+D SF LS L+ L + +N
Sbjct: 286 LLMLRELHLSQNAINRISPDAWEFCQKLSELDLTFNHLSRLDDSSFLGLSLLNALHIGNN 345
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDL---ITPLKSLQELRLDDNDISMVTPDV 126
++ ++ + L++L TLDL +N + +D+ + L L++L L N I +T
Sbjct: 346 KVSYIADCAFRGLTSLKTLDLRNNEISWTIEDMSGAFSGLDRLRQLILQGNRIRSITKKA 405
Query: 127 IGDNVTITTLTLSG 140
T+ L LSG
Sbjct: 406 FAGLDTLEHLDLSG 419
Score = 119 (46.9 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 34/123 (27%), Positives = 65/123 (52%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
L ++HN+ S ++ +L+ L L + ++N+++ + + + + + L LA N I +
Sbjct: 79 LDLSHNRLSFIQTSSLSHLQSLQEVKLNNNELETIPNLGSIS-ANIRQLSLAGNAIDKIL 137
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITT 135
L +L TLDLS+N + L + PL+ L+ L +++N +S + P DN+ T
Sbjct: 138 PEQLEAFQSLETLDLSNNNISEL-RTAFPPLQ-LKYLYINNNRVSSMEPGYF-DNLASTL 194
Query: 136 LTL 138
L L
Sbjct: 195 LVL 197
Score = 113 (44.8 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 35/133 (26%), Positives = 54/133 (40%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T + L +LK L + N + + GA GL + L HN + + L L L
Sbjct: 234 TFQGLGALKSLKMQRNGVTKLMDGAFWGLSNMEVLQLDHNNLTEITKGWLYGLLMLRELH 293
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
L+ N I +S + L+ LDL+ N L L L L L + +N +S +
Sbjct: 294 LSQNAINRISPDAWEFCQKLSELDLTFNHLSRLDDSSFLGLSLLNALHIGNNKVSYIADC 353
Query: 126 VIGDNVTITTLTL 138
++ TL L
Sbjct: 354 AFRGLTSLKTLDL 366
Score = 112 (44.5 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 34/112 (30%), Positives = 50/112 (44%)
Query: 9 RLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAH 68
+L L+ L + N+ +V GL L SL N + L D +F LS + L L H
Sbjct: 213 KLPQLQHLELNRNKIKNVDGLTFQGLGALKSLKMQRNGVTKLMDGAFWGLSNMEVLQLDH 272
Query: 69 NRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDIS 120
N + ++ L L L L LS N + ++ D + L EL L N +S
Sbjct: 273 NNLTEITKGWLYGLLMLRELHLSQNAINRISPDAWEFCQKLSELDLTFNHLS 324
>ZFIN|ZDB-GENE-030616-572 [details] [associations]
symbol:scrib "scribbled homolog (Drosophila)"
species:7955 "Danio rerio" [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IMP] [GO:0014021 "secondary neural
tube formation" evidence=IMP] [GO:0001764 "neuron migration"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA;IDA] [GO:0060027
"convergent extension involved in gastrulation" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=IEA;ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0016477 "cell migration" evidence=ISS]
[GO:0045211 "postsynaptic membrane" evidence=ISS] [GO:0045930
"negative regulation of mitotic cell cycle" evidence=ISS]
[GO:0043065 "positive regulation of apoptotic process"
evidence=ISS] [GO:0050918 "positive chemotaxis" evidence=ISS]
[GO:0005913 "cell-cell adherens junction" evidence=ISS] [GO:0016337
"cell-cell adhesion" evidence=ISS] [GO:0042734 "presynaptic
membrane" evidence=ISS] [GO:0032863 "activation of Rac GTPase
activity" evidence=ISS] [GO:0031252 "cell leading edge"
evidence=ISS] [GO:0035089 "establishment of apical/basal cell
polarity" evidence=ISS] [GO:0060561 "apoptotic process involved in
morphogenesis" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] Pfam:PF00595
InterPro:IPR001611 InterPro:IPR001478 PROSITE:PS50106
PROSITE:PS51450 SMART:SM00228 ZFIN:ZDB-GENE-030616-572
GO:GO:0005886 GO:GO:0000132 GO:GO:0005737 GO:GO:0001764
GO:GO:0008283 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
GO:GO:0005913 GO:GO:0043065 GO:GO:0016337 SUPFAM:SSF50156
InterPro:IPR025875 Pfam:PF12799 GO:GO:0050918 GO:GO:0032863
GO:GO:0060027 GO:GO:0045930 GO:GO:0060561 GO:GO:0035089
GeneTree:ENSGT00650000093182 CTD:23513 KO:K16175 EMBL:AB188388
IPI:IPI00650410 RefSeq:NP_001007176.1 UniGene:Dr.41478 HSSP:Q14160
ProteinModelPortal:Q4H4B6 SMR:Q4H4B6 STRING:Q4H4B6 PRIDE:Q4H4B6
Ensembl:ENSDART00000074212 GeneID:368473 KEGG:dre:368473
HOGENOM:HOG000113281 InParanoid:Q4H4B6 OMA:GHRNSLE
OrthoDB:EOG44BB1C NextBio:20812953 ArrayExpress:Q4H4B6 Bgee:Q4H4B6
GO:GO:0014021 Uniprot:Q4H4B6
Length = 1724
Score = 141 (54.7 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 44/129 (34%), Positives = 69/129 (53%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L L ++ N+ S + ++GL LT L N +++L D S +L LS L + N
Sbjct: 219 LRQLVCLDVSENRLSELPT-EISGLIALTDLLLSENLLEILPD-SIGSLKKLSILKVNQN 276
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
R+V ++ S+ NLT L L+ N L++L + L LK L L +D N +S V P +G
Sbjct: 277 RLVHLTD-SIGECENLTELMLTENLLQSLPRSL-GKLKKLTNLNVDRNRLSSV-PAELGG 333
Query: 130 NVTITTLTL 138
V++ L+L
Sbjct: 334 CVSLNVLSL 342
Score = 111 (44.1 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 41/133 (30%), Positives = 68/133 (51%)
Query: 7 VRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDL 66
+ LS+L L + N S+ +L+ L KL L N ++VL D + AL L L L
Sbjct: 147 IGNLSNLVTLELRENLLKSLP-SSLSFLVKLEQLDLGSNVLEVLPD-TLGALPNLRELWL 204
Query: 67 AHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDV 126
N++ ++ L +L L LD+S N L L + I+ L +L +L L +N + ++ PD
Sbjct: 205 DRNQLSSLP-PELGNLRQLVCLDVSENRLSELPTE-ISGLIALTDLLLSENLLEIL-PDS 261
Query: 127 IGDNVTITTLTLS 139
IG ++ L ++
Sbjct: 262 IGSLKKLSILKVN 274
>RGD|1310827 [details] [associations]
symbol:Tril "TLR4 interactor with leucine-rich repeats"
species:10116 "Rattus norvegicus" [GO:0001530 "lipopolysaccharide
binding" evidence=ISO] [GO:0002718 "regulation of cytokine
production involved in immune response" evidence=ISO] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0034142 "toll-like receptor 4 signaling
pathway" evidence=ISO] [GO:0045087 "innate immune response"
evidence=IEA] [GO:0046696 "lipopolysaccharide receptor complex"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
RGD:1310827 GO:GO:0016021 GO:GO:0006954 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0045087 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104056 Pfam:PF01463 HSSP:P07359 CTD:9865
HOVERGEN:HBG066060 OMA:EFPCDRF OrthoDB:EOG4KWJSW EMBL:BC100659
IPI:IPI00358213 RefSeq:NP_001029182.1 UniGene:Rn.25045
STRING:Q496Z2 Ensembl:ENSRNOT00000036951 GeneID:362364
KEGG:rno:362364 UCSC:RGD:1310827 InParanoid:Q496Z2 NextBio:679662
Genevestigator:Q496Z2 Uniprot:Q496Z2
Length = 811
Score = 137 (53.3 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 43/137 (31%), Positives = 62/137 (45%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T+ L L++L N+ + RG+ GL+ L L N + L D F L L +L
Sbjct: 126 TLAPLRKLRILYANGNEIGRLSRGSFEGLESLVKLRLDGNVLGALPDAVFAPLGNLLYLH 185
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLIT--PLKSLQELRLDDNDISMVT 123
L NRI + + L L L+LS N L+ + T PL+SL L L N + +
Sbjct: 186 LEANRIRFLGKNAFTQLGKLRFLNLSANELQPSLRHAATFVPLRSLSTLILSANSLQHLG 245
Query: 124 PDVIGDNVTITTLTLSG 140
P V + L+LSG
Sbjct: 246 PRVFQHLPRLGLLSLSG 262
Score = 131 (51.2 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 40/114 (35%), Positives = 57/114 (50%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T +LS L+ L + +N ++ G LA L KL L + N+I L SF L +L L
Sbjct: 102 TFEKLSRLEELYLGNNLLQALAPGTLAPLRKLRILYANGNEIGRLSRGSFEGLESLVKLR 161
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDI 119
L N + A+ A A L NL L L N +R L ++ T L L+ L L N++
Sbjct: 162 LDGNVLGALPDAVFAPLGNLLYLHLEANRIRFLGKNAFTQLGKLRFLNLSANEL 215
Score = 124 (48.7 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 35/110 (31%), Positives = 53/110 (48%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
+ L L +LS++ NQ + + A GL+ L L N+++ L L +L LDL+
Sbjct: 250 QHLPRLGLLSLSGNQLTHLAPEAFWGLEALRELRLEGNRLNQLPLTLLEPLHSLEALDLS 309
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
N + A+ A+ H L L L N L AL+ D+ +L L LD N
Sbjct: 310 GNELSALHPATFGHQGRLRELSLRDNALSALSGDIFAASPALYRLDLDGN 359
Score = 119 (46.9 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 41/131 (31%), Positives = 57/131 (43%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L SL L ++ N + L +L LS NQ+ L +F L L L L N
Sbjct: 228 LRSLSTLILSANSLQHLGPRVFQHLPRLGLLSLSGNQLTHLAPEAFWGLEALRELRLEGN 287
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
R+ + L L +L LDLS N L AL L+EL L DN +S ++ D+
Sbjct: 288 RLNQLPLTLLEPLHSLEALDLSGNELSALHPATFGHQGRLRELSLRDNALSALSGDIFAA 347
Query: 130 NVTITTLTLSG 140
+ + L L G
Sbjct: 348 SPALYRLDLDG 358
Score = 111 (44.1 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 34/111 (30%), Positives = 55/111 (49%)
Query: 17 SIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSG 76
S+ N +++ L +L L +NQI L +F LS L L L +N + A++
Sbjct: 65 SLGGNFITNITAFDFHRLGQLRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQALAP 124
Query: 77 ASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI 127
+LA L L L + N + L++ L+SL +LRLD N + + PD +
Sbjct: 125 GTLAPLRKLRILYANGNEIGRLSRGSFEGLESLVKLRLDGNVLGAL-PDAV 174
Score = 110 (43.8 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 38/133 (28%), Positives = 63/133 (47%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHS--FRALSTLSHLDLA 67
L +L L + N+ + + A L KL L+ N++ H+ F L +LS L L+
Sbjct: 178 LGNLLYLHLEANRIRFLGKNAFTQLGKLRFLNLSANELQPSLRHAATFVPLRSLSTLILS 237
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI 127
N + + HL L L LS N L L + L++L+ELRL+ N ++ + ++
Sbjct: 238 ANSLQHLGPRVFQHLPRLGLLSLSGNQLTHLAPEAFWGLEALRELRLEGNRLNQLPLTLL 297
Query: 128 GDNVTITTLTLSG 140
++ L LSG
Sbjct: 298 EPLHSLEALDLSG 310
>TAIR|locus:2137296 [details] [associations]
symbol:RLP46 "receptor like protein 46" species:3702
"Arabidopsis thaliana" [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006952 "defense response" evidence=ISS] [GO:0016301 "kinase
activity" evidence=ISS] [GO:0007165 "signal transduction"
evidence=IC] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0006612 "protein targeting to membrane" evidence=RCA]
[GO:0009617 "response to bacterium" evidence=RCA] [GO:0009862
"systemic acquired resistance, salicylic acid mediated signaling
pathway" evidence=RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA] [GO:0010310 "regulation of
hydrogen peroxide metabolic process" evidence=RCA] [GO:0010363
"regulation of plant-type hypersensitive response" evidence=RCA]
[GO:0031348 "negative regulation of defense response" evidence=RCA]
[GO:0035304 "regulation of protein dephosphorylation" evidence=RCA]
Pfam:PF00560 InterPro:IPR001611 EMBL:CP002687 InterPro:IPR025875
Pfam:PF12799 InterPro:IPR013210 Pfam:PF08263 OMA:HTIACYL
IPI:IPI00523927 RefSeq:NP_192331.2 UniGene:At.54132
UniGene:At.65805 ProteinModelPortal:F4JGB6 SMR:F4JGB6 PRIDE:F4JGB6
EnsemblPlants:AT4G04220.1 GeneID:825737 KEGG:ath:AT4G04220
Uniprot:F4JGB6
Length = 811
Score = 137 (53.3 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 43/116 (37%), Positives = 57/116 (49%)
Query: 24 SSVRRGALAGLDKLTSLSCHHNQID-VLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHL 82
SS+ R L ++ L L N I + ++F L++L LD+ NR L L
Sbjct: 95 SSILRPILR-INSLVGLDVSFNNIQGEIPGYAFVNLTSLISLDMCCNRFNGSIPHELFSL 153
Query: 83 SNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTLTL 138
+NL LDLS N + I LK+LQEL LD+N I P IG V + TLTL
Sbjct: 154 TNLQRLDLSRNVIGGTLSGDIKELKNLQELILDENLIGGAIPSEIGSLVELLTLTL 209
Score = 115 (45.5 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 38/130 (29%), Positives = 56/130 (43%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L+SL L + N+F+ L L L L N I + L L L L N
Sbjct: 129 LTSLISLDMCCNRFNGSIPHELFSLTNLQRLDLSRNVIGGTLSGDIKELKNLQELILDEN 188
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
I + + L L TL L N + ++ L L+ + L +N +S PD IG+
Sbjct: 189 LIGGAIPSEIGSLVELLTLTLRQNMFNSSIPSSVSRLTKLKTIDLQNNFLSSKIPDDIGN 248
Query: 130 NVTITTLTLS 139
V ++TL+LS
Sbjct: 249 LVNLSTLSLS 258
Score = 105 (42.0 bits), Expect = 0.00011, P = 0.00011
Identities = 37/123 (30%), Positives = 59/123 (47%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
S L+ L I+ N+FS G + +S N +FR LS L LDL N+
Sbjct: 466 SYLEWLDISSNEFSGDVPAYFGGSTSMLLMS--QNNFSGEFPQNFRNLSYLIRLDLHDNK 523
Query: 71 IVAVSGASLAHLSN-LTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
I + ++ LS+ + L L +N L+ + I+ L SL+ L L +N++ P +G
Sbjct: 524 ISGTVASLISQLSSSVEVLSLRNNSLKGSIPEGISNLTSLKVLDLSENNLDGYLPSSLG- 582
Query: 130 NVT 132
N+T
Sbjct: 583 NLT 585
Score = 103 (41.3 bits), Expect = 0.00018, P = 0.00018
Identities = 37/129 (28%), Positives = 56/129 (43%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L++L+ L ++ N G + L L L N I +L L L L N
Sbjct: 153 LTNLQRLDLSRNVIGGTLSGDIKELKNLQELILDENLIGGAIPSEIGSLVELLTLTLRQN 212
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+ +S++ L+ L T+DL +NFL + D I L +L L L N +S P I +
Sbjct: 213 MFNSSIPSSVSRLTKLKTIDLQNNFLSSKIPDDIGNLVNLSTLSLSMNKLSGGIPSSIHN 272
Query: 130 NVTITTLTL 138
+ TL L
Sbjct: 273 LKNLETLQL 281
>UNIPROTKB|F1MLJ7 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090288 "negative regulation of cellular response to
growth factor stimulus" evidence=IEA] [GO:0090260 "negative
regulation of retinal ganglion cell axon guidance" evidence=IEA]
[GO:0090024 "negative regulation of neutrophil chemotaxis"
evidence=IEA] [GO:0071676 "negative regulation of mononuclear cell
migration" evidence=IEA] [GO:0071672 "negative regulation of smooth
muscle cell chemotaxis" evidence=IEA] [GO:0071504 "cellular
response to heparin" evidence=IEA] [GO:0070100 "negative regulation
of chemokine-mediated signaling pathway" evidence=IEA] [GO:0061364
"apoptotic process involved in luteolysis" evidence=IEA]
[GO:0060763 "mammary duct terminal end bud growth" evidence=IEA]
[GO:0051414 "response to cortisol stimulus" evidence=IEA]
[GO:0051058 "negative regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0050929 "induction of negative
chemotaxis" evidence=IEA] [GO:0048846 "axon extension involved in
axon guidance" evidence=IEA] [GO:0048754 "branching morphogenesis
of an epithelial tube" evidence=IEA] [GO:0048495 "Roundabout
binding" evidence=IEA] [GO:0045499 "chemorepellent activity"
evidence=IEA] [GO:0043394 "proteoglycan binding" evidence=IEA]
[GO:0043237 "laminin-1 binding" evidence=IEA] [GO:0043116 "negative
regulation of vascular permeability" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0032870 "cellular response to hormone stimulus" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0030837 "negative regulation of actin filament polymerization"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0021972 "corticospinal neuron axon guidance
through spinal cord" evidence=IEA] [GO:0021836 "chemorepulsion
involved in postnatal olfactory bulb interneuron migration"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0010629 "negative regulation of gene expression" evidence=IEA]
[GO:0010596 "negative regulation of endothelial cell migration"
evidence=IEA] [GO:0010593 "negative regulation of lamellipodium
assembly" evidence=IEA] [GO:0009986 "cell surface" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0005095 "GTPase inhibitor activity" evidence=IEA]
[GO:0002042 "cell migration involved in sprouting angiogenesis"
evidence=IEA] [GO:0001933 "negative regulation of protein
phosphorylation" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001657 "ureteric bud development"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005737 GO:GO:0008285 GO:GO:0005615 GO:GO:0009986
GO:GO:0030308 GO:GO:0001701 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0008201 GO:GO:0005509
GO:GO:0043116 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0008045 GO:GO:0071504
GO:GO:0005095 GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870
GO:GO:0030837 GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791
Pfam:PF00054 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0001656 GO:GO:0010596 GO:GO:0001657
GO:GO:0001933 GO:GO:0048754 GO:GO:0071676 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
GO:GO:0048846 GO:GO:0060763 GO:GO:0070100 GO:GO:0090288
GO:GO:0033563 GO:GO:0045499 GO:GO:0002042 Pfam:PF01463
GO:GO:0010593 GO:GO:0051414 GeneTree:ENSGT00700000104083
GO:GO:0090260 GO:GO:0021836 GO:GO:0061364 GO:GO:0021972
GO:GO:0050929 GO:GO:0090024 GO:GO:0051058 OMA:RHKMFKG
EMBL:DAAA02017049 IPI:IPI00692425 Ensembl:ENSBTAT00000061059
NextBio:20876291 Uniprot:F1MLJ7
Length = 1532
Score = 133 (51.9 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 30/114 (26%), Positives = 58/114 (50%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L+VL + N+ +++ RGA L +L L + N + + + F S L LDL+ N
Sbjct: 78 LRHLRVLQLMENKITTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTSKLYRLDLSEN 137
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVT 123
+I A+ + ++ L L +N + + L+ L+ L L++N+I+ ++
Sbjct: 138 QIQAIPRKAFRGAVDIKNLQLDYNHISCIEDGAFRALRDLEVLTLNNNNITRLS 191
Score = 122 (48.0 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 32/86 (37%), Positives = 47/86 (54%)
Query: 56 RALSTLSHL---DLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQEL 112
+ LS HL DL++NRI +S S ++++ L TL LS+N LR + LKSL+ L
Sbjct: 773 KELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLL 832
Query: 113 RLDDNDISMVTPDVIGDNVTITTLTL 138
L NDIS+V D ++ L +
Sbjct: 833 SLHGNDISVVPEGAFNDLAALSHLAI 858
Score = 122 (48.0 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 31/85 (36%), Positives = 43/85 (50%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
S L L ++ NQ ++ R A G + +L +N I +ED +FRAL L L L +N
Sbjct: 127 SKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNHISCIEDGAFRALRDLEVLTLNNNN 186
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFL 95
I +S AS H+ L T L N L
Sbjct: 187 ITRLSVASFNHMPKLRTFRLHSNNL 211
Score = 118 (46.6 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 32/105 (30%), Positives = 52/105 (49%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
L+ + +++NQ S + A GL L SL + N+I L F L +L L L N+I
Sbjct: 328 LRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKIN 387
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDN 117
+ + L NL L L N L+ + + +PL+++Q + L N
Sbjct: 388 CLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQN 432
Score = 114 (45.2 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 33/124 (26%), Positives = 60/124 (48%)
Query: 16 LSIAHNQFSSVRR-GALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAV 74
L + +N+F+ + G L +L ++ +N+I +E+ +F S ++ + L NR+ V
Sbjct: 540 LRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENV 599
Query: 75 SGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTIT 134
L +L TL L N + + D L S++ L L DN I+ + P +++
Sbjct: 600 QHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQITTIAPGAFDTLHSLS 659
Query: 135 TLTL 138
TL L
Sbjct: 660 TLNL 663
Score = 110 (43.8 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 27/107 (25%), Positives = 50/107 (46%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
++L L+ ++ ++N+ + + GA G + + N+++ ++ F+ L +L L L
Sbjct: 557 KKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLR 616
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRL 114
NRI V S LS++ L L N + + L SL L L
Sbjct: 617 SNRISCVGNDSFIGLSSVRLLSLYDNQITTIAPGAFDTLHSLSTLNL 663
Score = 103 (41.3 bits), Expect = 0.00037, P = 0.00037
Identities = 33/124 (26%), Positives = 52/124 (41%)
Query: 16 LSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVS 75
L + N + + + AGL L L N+I +E +F+ L L L L N +
Sbjct: 60 LDLNGNNITRITKTDFAGLRHLRVLQLMENKITTIERGAFQDLKELERLRLNRNHLQLFP 119
Query: 76 GASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITT 135
S L LDLS N ++A+ + ++ L+LD N IS + +
Sbjct: 120 ELLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNHISCIEDGAFRALRDLEV 179
Query: 136 LTLS 139
LTL+
Sbjct: 180 LTLN 183
Score = 98 (39.6 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 29/104 (27%), Positives = 50/104 (48%)
Query: 35 DKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIVAVSGASLAHLSNLTTLDLSHNF 94
+ +T + N I V+ +F L +DL++N+I ++ + L +L +L L N
Sbjct: 302 ETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 361
Query: 95 LRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVTITTLTL 138
+ L + L L SLQ L L+ N I+ + D D + L+L
Sbjct: 362 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSL 405
Score = 45 (20.9 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 10/40 (25%), Positives = 20/40 (50%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQI 47
R L L+VL++ +N + + + + KL + H N +
Sbjct: 172 RALRDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNL 211
>UNIPROTKB|Q5R3F8 [details] [associations]
symbol:ELFN2 "Protein phosphatase 1 regulatory subunit 29"
species:9606 "Homo sapiens" [GO:0004864 "protein phosphatase
inhibitor activity" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0019902 "phosphatase binding"
evidence=IDA] [GO:0010923 "negative regulation of phosphatase
activity" evidence=IDA] InterPro:IPR001611 InterPro:IPR003961
PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060 GO:GO:0016021
InterPro:IPR000483 SMART:SM00082 GO:GO:0004864 InterPro:IPR019931
GO:GO:0010923 GO:GO:0019902 HSSP:P24014 EMBL:Z94160
HOVERGEN:HBG056941 eggNOG:NOG123466 HOGENOM:HOG000112354
OrthoDB:EOG4SXNC1 EMBL:AB067491 IPI:IPI00289849 RefSeq:NP_443138.2
UniGene:Hs.660812 UniGene:Hs.716143 ProteinModelPortal:Q5R3F8
SMR:Q5R3F8 IntAct:Q5R3F8 PhosphoSite:Q5R3F8 DMDM:74755895
PaxDb:Q5R3F8 PeptideAtlas:Q5R3F8 PRIDE:Q5R3F8 DNASU:114794
Ensembl:ENST00000349653 Ensembl:ENST00000402918 GeneID:114794
KEGG:hsa:114794 UCSC:uc003asq.4 CTD:114794 GeneCards:GC22M037764
H-InvDB:HIX0016443 HGNC:HGNC:29396 HPA:HPA000781 neXtProt:NX_Q5R3F8
PharmGKB:PA162385040 InParanoid:Q5R3F8 OMA:AFSECPS
GenomeRNAi:114794 NextBio:79223 Bgee:Q5R3F8 CleanEx:HS_ELFN2
Genevestigator:Q5R3F8 Uniprot:Q5R3F8
Length = 820
Score = 137 (53.3 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 29/83 (34%), Positives = 50/83 (60%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
SSL+VL + +N+ S++ G L G+ +L L HN I+V+ +F +L +DL+ NR
Sbjct: 103 SSLQVLQLGYNKLSNLTEGMLRGMSRLQFLFVQHNLIEVVTPTAFSECPSLISIDLSSNR 162
Query: 71 IVAVSGASLAHLSNLTTLDLSHN 93
+ + GA+ A L++L +L+ N
Sbjct: 163 LSRLDGATFASLASLMVCELAGN 185
Score = 118 (46.6 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 32/130 (24%), Positives = 59/130 (45%)
Query: 11 SSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNR 70
S++ L + N+ +V +L LT L+ N+I +ED +F S+L L L +N+
Sbjct: 55 STVHDLRLNENKLKAVLYSSLNRFGNLTDLNLTKNEISYIEDGAFLGQSSLQVLQLGYNK 114
Query: 71 IVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDN 130
+ ++ L +S L L + HN + +T + SL + L N +S +
Sbjct: 115 LSNLTEGMLRGMSRLQFLFVQHNLIEVVTPTAFSECPSLISIDLSSNRLSRLDGATFASL 174
Query: 131 VTITTLTLSG 140
++ L+G
Sbjct: 175 ASLMVCELAG 184
>ZFIN|ZDB-GENE-061103-397 [details] [associations]
symbol:zgc:153913 "zgc:153913" species:7955 "Danio
rerio" [GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001611
PROSITE:PS51450 ZFIN:ZDB-GENE-061103-397 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 SMART:SM00013 KO:K13023
GeneTree:ENSGT00700000104286 EMBL:CABZ01111922 EMBL:BC125910
IPI:IPI00613175 RefSeq:NP_001073448.1 UniGene:Dr.152360
Ensembl:ENSDART00000092924 GeneID:559700 KEGG:dre:559700
HOGENOM:HOG000205740 InParanoid:A0JMK3 OMA:CKVDKCS
OrthoDB:EOG4P8FJC NextBio:20883092 Uniprot:A0JMK3
Length = 496
Score = 134 (52.2 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 39/119 (32%), Positives = 56/119 (47%)
Query: 6 TVRRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLD 65
T L++L L + +N+ S V G L +L L N + L F+ L L LD
Sbjct: 117 TFSSLTNLTRLLLNNNKLSGVDAGLFHSLHQLEMLQLRGNGLSFLSGRLFQRLHRLQELD 176
Query: 66 LAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTP 124
L+ N+I ++S + S L L L N + L + T L LQEL L N I ++TP
Sbjct: 177 LSFNQISSLSTELFQNNSELRVLSLQANKIPNLPDGIFTHLDHLQELNLRSNLIRVLTP 235
Score = 127 (49.8 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 41/132 (31%), Positives = 62/132 (46%)
Query: 8 RRLSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLA 67
+RL L+ L ++ NQ SS+ +L LS N+I L D F L L L+L
Sbjct: 167 QRLHRLQELDLSFNQISSLSTELFQNNSELRVLSLQANKIPNLPDGIFTHLDHLQELNLR 226
Query: 68 HNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVI 127
N I ++ S ++L TL L N L LT + L + L L N ++ V D+
Sbjct: 227 SNLIRVLTPGSFP--ASLKTLILKKNLLEKLTNAVFHTLHYITYLDLSQNSLTEVPADLF 284
Query: 128 GDNVTITTLTLS 139
+ +++ TL LS
Sbjct: 285 QNLISLETLDLS 296
Score = 109 (43.4 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 34/130 (26%), Positives = 59/130 (45%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
L L+ L++ N + G+ L +L N ++ L + F L +++LDL+ N
Sbjct: 217 LDHLQELNLRSNLIRVLTPGSFPA--SLKTLILKKNLLEKLTNAVFHTLHYITYLDLSQN 274
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGD 129
+ V +L +L TLDLS N + L + L S++ + L N + V ++ D
Sbjct: 275 SLTEVPADLFQNLISLETLDLSENRISTLAGSVFKGLFSIKSVYLQKNSLISVDAHLLKD 334
Query: 130 NVTITTLTLS 139
+ L LS
Sbjct: 335 QHDLQLLDLS 344
>RGD|1308812 [details] [associations]
symbol:Mfhas1 "malignant fibrous histiocytoma amplified sequence
1" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 RGD:1308812
InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
EMBL:CH473970 InterPro:IPR020859 PROSITE:PS51424
GeneTree:ENSGT00690000102098 CTD:9258 OrthoDB:EOG4CVG64
IPI:IPI00212019 RefSeq:NP_001100786.1 UniGene:Rn.106316
Ensembl:ENSRNOT00000015203 GeneID:306508 KEGG:rno:306508
UCSC:RGD:1308812 NextBio:656142 Uniprot:D3ZJL1
Length = 1046
Score = 138 (53.6 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 41/128 (32%), Positives = 68/128 (53%)
Query: 13 LKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHNRIV 72
L L ++HN+ + + ++ L +L L+ HNQ+ L AL+ L LD++ NR+
Sbjct: 109 LTELDVSHNRLTILGAEVVSALRELRKLNLSHNQLPALPAQ-LGALAHLEELDVSFNRLA 167
Query: 73 AVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPDVIGDNVT 132
+ S + L++L TLD+ HN L A Q L+ L +L+EL + N + + P+ I
Sbjct: 168 HLPD-SFSCLNHLRTLDVDHNQLTAFPQQLLQ-LAALEELDVSSNRLRGL-PEDISALRA 224
Query: 133 ITTLTLSG 140
+ L LSG
Sbjct: 225 LKILWLSG 232
Score = 127 (49.8 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 44/134 (32%), Positives = 73/134 (54%)
Query: 7 VRRLSSLKVLSIAHNQFSSV--RRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHL 64
V L L+ L+++HNQ ++ + GALA L++L N++ L D SF L+ L L
Sbjct: 127 VSALRELRKLNLSHNQLPALPAQLGALAHLEEL---DVSFNRLAHLPD-SFSCLNHLRTL 182
Query: 65 DLAHNRIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTP 124
D+ HN++ A L L+ L LD+S N LR L +D I+ L++L+ L L ++ + P
Sbjct: 183 DVDHNQLTAFP-QQLLQLAALEELDVSSNRLRGLPED-ISALRALKILWLSGAELGTL-P 239
Query: 125 DVIGDNVTITTLTL 138
+ ++ +L L
Sbjct: 240 SGFCELASLESLML 253
Score = 107 (42.7 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 34/116 (29%), Positives = 55/116 (47%)
Query: 10 LSSLKVLSIAHNQFSSVRRGALAGLDKLTSLSCHHNQIDVLEDHSFRALSTLSHLDLAHN 69
+ ++VL++ +N V G + L L L N+ L L+ LD++HN
Sbjct: 58 IGDIEVLNLGNNGLEDVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHN 117
Query: 70 RIVAVSGASLAHLSNLTTLDLSHNFLRALTQDLITPLKSLQELRLDDNDISMVTPD 125
R+ + ++ L L L+LSHN L AL L L L+EL + N ++ + PD
Sbjct: 118 RLTILGAEVVSALRELRKLNLSHNQLPALPAQL-GALAHLEELDVSFNRLAHL-PD 171
WARNING: HSPs involving 780 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.132 0.369 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 141 141 0.00091 102 3 11 22 0.40 31
30 0.47 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1030
No. of states in DFA: 549 (58 KB)
Total size of DFA: 115 KB (2076 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:02
No. of threads or processors used: 24
Search cpu time: 15.30u 0.08s 15.38t Elapsed: 00:00:08
Total cpu time: 15.38u 0.09s 15.47t Elapsed: 00:00:10
Start: Thu Aug 15 12:09:42 2013 End: Thu Aug 15 12:09:52 2013
WARNINGS ISSUED: 2